BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780170|ref|YP_003064583.1| cationic amino acid ABC transporter, periplasmic binding protein [Candidatus Liberibacter asiaticus str. psy62] (342 letters) Database: nr 13,984,884 sequences; 4,792,584,752 total letters Searching..................................................done >gi|227821880|ref|YP_002825850.1| hypothetical protein NGR_c13170 [Sinorhizobium fredii NGR234] gi|227340879|gb|ACP25097.1| hypothetical protein NGR_c13170 [Sinorhizobium fredii NGR234] Length = 341 Score = 382 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 182/342 (53%), Positives = 261/342 (76%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ ++ + + +A+ L D+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MARRILTALFGAAVMGIGAQAASAATLDDVKAKGFVQCGVNTGLAGFAAPDASGNWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C+A+++A+F D +K++Y P +AKERF ALQS ++D+L+RNT WT+ R+ +LG FRP Sbjct: 61 VDYCKAIAAAVFGDATKVKYTPTSAKERFPALQSGEVDVLARNTTWTINRDTALGFNFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K + S +LSGA++CVQ GTTTEL LADYFK +N++Y+P+VFE++E Sbjct: 121 VNYYDGQGFMVRKSLNVKSALELSGAAVCVQTGTTTELNLADYFKTNNLQYNPVVFEKLE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT +P +H+ILP+IISK PL PA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLSKPDDHMILPEIISKEPLGPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V+W HYA++ AEE G+TQ N+ ++ K + NPDVQRFLG++ S IG LGLT +W +I Sbjct: 241 VTWVHYALIQAEEFGVTQANVEEMKK-SPNPDVQRFLGVEADSKIGTDLGLTNEWAVNVI 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRN+G S LKI RG NALW+KGG+ YAPP+R Sbjct: 300 KAVGNYGEVFDRNIGAGSPLKIERGLNALWNKGGIQYAPPVR 341 >gi|116251960|ref|YP_767798.1| general L-amino acid substrate binding protein [Rhizobium leguminosarum bv. viciae 3841] gi|3182887|sp|Q52812|AAPJ_RHIL3 RecName: Full=General L-amino acid-binding periplasmic protein AapJ; Flags: Precursor gi|1154894|emb|CAA57933.1| general amino acid ABC type transporter [Rhizobium leguminosarum] gi|115256608|emb|CAK07696.1| General L-amino acid substrate binding protein [Rhizobium leguminosarum bv. viciae 3841] Length = 341 Score = 380 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 190/342 (55%), Positives = 261/342 (76%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + +L + + +A+ L D+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MKNKLLSAAIGAAVLAVGASAASATTLSDVKAKGFVQCGVNTGLTGFAAPDASGNWAGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+A++SA+F DP+K++Y P NAKERF ALQS +ID+LSRNT WT+ R+ +LG FRP Sbjct: 61 VDFCKAVASAVFGDPTKVKYTPTNAKERFTALQSGEIDVLSRNTTWTINRDTALGFNFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DGQGF++ K + S +LSGA+ICVQ+GTTTEL LADYFK +N++Y+P+VFE + Sbjct: 121 VTYYDGQGFMVRKGLNVKSALELSGAAICVQSGTTTELNLADYFKTNNLQYNPVVFENLP 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT P EH+ILP+IISK PL PA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHIILPEIISKEPLGPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSWT YA++ AEE GITQ N++++ K++ NPD++RFLG + + IG LGLT DW +I Sbjct: 241 VSWTAYALINAEEFGITQANVDEM-KNSPNPDIKRFLGSETDTKIGTDLGLTNDWAANVI 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RN+G S LKI RG NALW+KGG+ YAPP+R Sbjct: 300 KGVGNYGEIFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341 >gi|241204488|ref|YP_002975584.1| cationic amino acid ABC transporter periplasmic-binding protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858378|gb|ACS56045.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 341 Score = 380 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 191/342 (55%), Positives = 261/342 (76%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + +L + + +A+ L D+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MKNKLLSAAIGAAVLAVGASAASATTLSDVKAKGFVQCGVNTGLTGFAAPDASGNWAGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+A++SA+F DP+K++Y P NAKERF ALQS +ID+LSRNT WT+ R+ +LG FRP Sbjct: 61 VDFCKAVASAVFGDPTKVKYTPTNAKERFTALQSGEIDVLSRNTTWTINRDTALGFNFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DGQGF++ K + S +LSGA+ICVQ+GTTTEL LADYFK +N++Y+P+VFE + Sbjct: 121 VTYYDGQGFMVRKGLNVKSALELSGAAICVQSGTTTELNLADYFKTNNLQYNPVVFENLP 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT P EHVILP+IISK PL PA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHVILPEIISKEPLGPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSWT YA++ AEE GITQ N++++ K++ NPD++RFLG + + IG LGLT DW +I Sbjct: 241 VSWTAYALINAEEFGITQANVDEM-KNSPNPDIKRFLGSETDTKIGTDLGLTNDWAANVI 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RN+G S LKI RG NALW+KGG+ YAPP+R Sbjct: 300 KGVGNYGEIFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341 >gi|325292970|ref|YP_004278834.1| general L-amino acid-binding periplasmic protein AapJ precursor [Agrobacterium sp. H13-3] gi|325060823|gb|ADY64514.1| general L-amino acid-binding periplasmic protein AapJ precursor [Agrobacterium sp. H13-3] Length = 340 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 172/342 (50%), Positives = 250/342 (73%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ +L S ++ A L D+K +GF+ CG++ G+ GF+ G+W G D Sbjct: 1 MKKAILSAVIGAAVLGGASVASAA-TLQDVKSKGFVTCGVSAGIPGFSNPDDKGEWSGID 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CR +++A+F DP+K +++ L++K+RF ALQS ++D+L+RNT WT+ R+ SLG FR Sbjct: 60 VDYCRGIATAVFGDPTKAKFVALSSKDRFPALQSGEVDVLTRNTTWTISRDTSLGFNFRT 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGFI K + S +LSGA++CVQ GTTTEL LADYFK +N++Y+P+VFE+ Sbjct: 120 VNYYDGQGFIAKKGLNVKSALELSGAAVCVQTGTTTELNLADYFKTNNLQYNPVVFEKES 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + +AY + RCD YT D S LYA++L P ++++LP++ISK PL PA+ QGD +W++I Sbjct: 180 DATSAYDSGRCDVYTTDQSGLYAIRLKLKNPDDNIVLPEVISKEPLGPAVRQGDDQWFDI 239 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V+W HYAMV AEELGIT KN+++ K++ NPD++R LG ++ + IG LG+T DW Y I+ Sbjct: 240 VTWVHYAMVNAEELGITSKNVDE-QKNSANPDIKRLLGTEEGTKIGTDLGVTNDWAYNIV 298 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRN+G S LKI RG NALW+KGGL YAPP+R Sbjct: 299 KKVGNYGEVFDRNVGAGSPLKIERGQNALWTKGGLQYAPPVR 340 >gi|327190790|gb|EGE57858.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli CNPAF512] Length = 341 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 188/342 (54%), Positives = 264/342 (77%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + +L + + +A+ LGD+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MKNKLLSAAIGAAVLALGAPAASATTLGDVKAKGFVQCGVNTGLAGFAAPDASGNWAGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+A++SA+F DP+K+++ PL+A RF ALQS +ID+L+RNT W++ R+ +LGL FR Sbjct: 61 VDFCKAVASAVFGDPTKVKFTPLSAANRFPALQSGEIDVLARNTTWSINRDTALGLNFRF 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K + S +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++ Sbjct: 121 VNYYDGQGFMVRKSLNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT P EH ILP+IISK PLAPA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHAILPEIISKEPLAPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSW YAM+ AEE GITQ N++ + K++ NPD++RFLG++ + IG LGLT +W Y II Sbjct: 241 VSWVGYAMINAEEFGITQANVDDM-KNSPNPDIKRFLGVEADTKIGTDLGLTNEWAYNII 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +++GNYGE+F+RN+G S LKI RG NALW+KGG+ YAPP+R Sbjct: 300 KNVGNYGEVFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341 >gi|15965231|ref|NP_385584.1| general L-amino acid-binding periplasmic ABC transporter protein [Sinorhizobium meliloti 1021] gi|307316996|ref|ZP_07596437.1| cationic amino acid ABC transporter, periplasmic binding protein [Sinorhizobium meliloti AK83] gi|15074411|emb|CAC46057.1| Probable general L-amino acid-binding periplasmic ABC transporter [Sinorhizobium meliloti 1021] gi|306897084|gb|EFN27829.1| cationic amino acid ABC transporter, periplasmic binding protein [Sinorhizobium meliloti AK83] Length = 341 Score = 379 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 189/342 (55%), Positives = 267/342 (78%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +++ ++ + + +A+ L D+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MARRILTALVGAAVVGIGTHAASAATLDDVKAKGFVQCGVNTGLAGFAAPDASGNWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C+A+++AIF D SK++Y PL+AKERF ALQS ++D+L+RNT W++ R+ +LG FRP Sbjct: 61 VDYCKAIAAAIFGDGSKVKYTPLSAKERFPALQSGEVDVLARNTTWSINRDTALGFNFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ + S +LSGA++CVQ GTTTEL LADYFKA+N++Y+P+VFE++E Sbjct: 121 VNYYDGQGFMVRKELDVKSALELSGAAVCVQTGTTTELNLADYFKANNLQYNPVVFEKLE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT +P +H++LP+IISK PLAPA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLSKPDDHIVLPEIISKEPLAPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSW HYA+V AEE G+TQ N+ ++ K +TNPDVQRFLG++ S IG LGLT +W I+ Sbjct: 241 VSWVHYALVQAEEFGVTQANLEEMKK-STNPDVQRFLGVEADSKIGTDLGLTNEWAVNIV 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRN+G S LKI RG NALW+KGGL YAPP+R Sbjct: 300 KAVGNYGEVFDRNIGAGSPLKIERGLNALWNKGGLQYAPPVR 341 >gi|209549162|ref|YP_002281079.1| cationic amino acid ABC transporter periplasmic binding protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534918|gb|ACI54853.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 341 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 191/342 (55%), Positives = 262/342 (76%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +++ + + + +A+ LGD+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MKNKLLSAVIGAAVFALGTSAASATTLGDVKAKGFVQCGVNTGLTGFAAPDASGNWAGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+A++SA+F DP+K++Y P NAKERF ALQS +ID+LSRNT WT+ R+ +LG FRP Sbjct: 61 VDFCKAVASAVFGDPTKVKYTPTNAKERFTALQSGEIDVLSRNTTWTINRDTALGFNFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DGQGF++ K + S +LSGA+ICVQ+GTTTEL LADYFK +N++Y+P+VFE + Sbjct: 121 VTYYDGQGFMVRKSLNVKSALELSGAAICVQSGTTTELNLADYFKTNNLQYNPVVFENLP 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT P EHVILP+IISK PL PA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHVILPEIISKEPLGPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSWT YA++ AEE GITQ N++++ K++ NPD++RFLG + + IG LGLT DW +I Sbjct: 241 VSWTAYALINAEEFGITQANVDEM-KNSPNPDIKRFLGSETDTKIGTDLGLTNDWAANVI 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RN+G S LKI RG NALW+KGG+ YAPP+R Sbjct: 300 KGVGNYGEIFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341 >gi|307309254|ref|ZP_07588922.1| cationic amino acid ABC transporter, periplasmic binding protein [Sinorhizobium meliloti BL225C] gi|306900255|gb|EFN30872.1| cationic amino acid ABC transporter, periplasmic binding protein [Sinorhizobium meliloti BL225C] Length = 341 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 188/342 (54%), Positives = 267/342 (78%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +++ ++ + + +A+ L D+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MARRILTALVGAAVVGIGTHAASAATLDDVKAKGFVQCGVNTGLAGFAAPDASGNWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C+A+++AIF D SK++Y PL+AKERF ALQS ++D+L+RNT W++ R+ +LG FRP Sbjct: 61 VDYCKAIAAAIFGDGSKVKYTPLSAKERFPALQSGEVDVLARNTTWSINRDTALGFNFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ + S +LSGA++CVQ GTTTEL LADYFKA+N++Y+P+VFE++E Sbjct: 121 VNYYDGQGFMVRKELDVKSALELSGAAVCVQTGTTTELNLADYFKANNLQYNPVVFEKLE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT +P +H++LP+IISK PLAPA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLSKPDDHIVLPEIISKEPLAPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSW HYA+V AEE G+T+ N+ ++ K +TNPDVQRFLG++ S IG LGLT +W I+ Sbjct: 241 VSWVHYALVQAEEFGVTRANLEEMKK-STNPDVQRFLGVEADSKIGTDLGLTNEWAVNIV 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRN+G S LKI RG NALW+KGGL YAPP+R Sbjct: 300 KAVGNYGEVFDRNIGAGSPLKIERGLNALWNKGGLQYAPPVR 341 >gi|190891587|ref|YP_001978129.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] gi|190696866|gb|ACE90951.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] Length = 341 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 187/342 (54%), Positives = 264/342 (77%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + +L + + +A+ LGD+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 1 MKNKLLSAAIGAAVLALGAPAASATTLGDVKAKGFVQCGVNTGLAGFAAPDASGNWAGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+A++SA+F DP+K+++ PL+A RF ALQS +ID+L+RNT W++ R+ +LGL FR Sbjct: 61 VDFCKAVASAVFGDPTKVKFTPLSAANRFPALQSGEIDVLARNTTWSINRDTALGLNFRF 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K + S +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++ Sbjct: 121 VNYYDGQGFMVRKSLNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT P EH ILP+IISK PLAPA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHAILPEIISKEPLAPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSW YAM+ AEE GITQ N++ + K++ NPD++RFLG++ + IG LGLT +W Y I+ Sbjct: 241 VSWVGYAMINAEEFGITQANVDDM-KNSPNPDIKRFLGVEADTKIGTDLGLTNEWAYNIV 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +++GNYGE+F+RN+G S LKI RG NALW+KGG+ YAPP+R Sbjct: 300 KNVGNYGEVFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341 >gi|86357519|ref|YP_469411.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] gi|86281621|gb|ABC90684.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 348 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 187/342 (54%), Positives = 263/342 (76%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + + + +A+ LGD+K +GF++CG+NTGL GFA A+G+W GFD Sbjct: 8 MKNKLLSAAIGAAVFALGASAASATTLGDVKAKGFIQCGVNTGLAGFAAPDASGNWAGFD 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+A++SA+F DP+K+++ PL+A RF ALQS +ID+L+RNT W++ R+ +LGL FR Sbjct: 68 VDFCKAVASAVFGDPTKVKFTPLSAANRFPALQSGEIDVLARNTTWSINRDTALGLNFRF 127 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K + S +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++ Sbjct: 128 VNYYDGQGFMVRKSLNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLD 187 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT P EH ILP+IISK PLAPA+ QGD +W++I Sbjct: 188 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHAILPEIISKEPLAPAVRQGDDQWFDI 247 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSW YAM+ AEE GITQ N++ + K++ NPD++RFLG++ + IG LGLT +W Y I+ Sbjct: 248 VSWVGYAMINAEEFGITQANVDDM-KNSPNPDIKRFLGVEADTKIGTDLGLTNEWAYNIV 306 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +++GNYGE+F+RN+G S LKI RG NALWSKGG+ YAPP+R Sbjct: 307 KNVGNYGEVFERNIGQGSPLKIARGLNALWSKGGIQYAPPVR 348 >gi|239831564|ref|ZP_04679893.1| lysine-arginine-ornithine-binding periplasmic protein [Ochrobactrum intermedium LMG 3301] gi|239823831|gb|EEQ95399.1| lysine-arginine-ornithine-binding periplasmic protein [Ochrobactrum intermedium LMG 3301] Length = 360 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 185/344 (53%), Positives = 251/344 (72%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GF+ G+W GFD Sbjct: 18 MKKTLMTGVLGAAALFCVASGASADTLSDVKAKGFLQCGVNTGLLGFSSPNDKGEWSGFD 77 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA++SAIF DP+K+++ PLNAKERF ALQS +ID+L RNT WT+ R+ +LGL F Sbjct: 78 VDYCRAVASAIFGDPAKVKFTPLNAKERFTALQSGEIDVLIRNTTWTISRDTALGLDFAG 137 Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I YFDGQGF++ K GI+S QLSGASICVQAGTTTE+ +ADYF+A+ M+Y+P+VFE+ Sbjct: 138 INYFDGQGFMINSKKLSGINSALQLSGASICVQAGTTTEMNMADYFRANKMEYNPVVFEK 197 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD++W Sbjct: 198 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDSKWT 257 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V W H A++ AEE GITQ N+ ++ K + NPD++R LG++ + IG LGL DW + Sbjct: 258 DVVRWVHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGVEADTKIGTDLGLENDWVVK 316 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 317 IIKGVGNYGEIFERNIGSGSPLKIARGINAQWNKGGLQYGIPVR 360 >gi|217977867|ref|YP_002362014.1| cationic amino acid ABC transporter, periplasmic binding protein [Methylocella silvestris BL2] gi|217503243|gb|ACK50652.1| cationic amino acid ABC transporter, periplasmic binding protein [Methylocella silvestris BL2] Length = 340 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 182/343 (53%), Positives = 243/343 (70%), Gaps = 4/343 (1%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M+K + ++ L ++ + A +L ++KRG++ CG N G+ GF G W GF Sbjct: 1 MFKMNVVRTLFALGLMIGCAQGAQAGLLDQVQKRGYVICGSNPGVPGFGLPDDKGGWTGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVDFCRA+++AIF+DP+K++++ L+AK+RF ALQS ++D+LSRNT WTL RE G F Sbjct: 61 DVDFCRAVAAAIFNDPTKVKFIALSAKDRFTALQSGEVDLLSRNTTWTLSRETGQGFLFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ITY+DGQGF++ KK +SS +LSGASICVQ GTTTEL LAD+F+ +NMKY P+ F Sbjct: 121 GITYYDGQGFLVRKKLNLSSALELSGASICVQQGTTTELNLADFFRGNNMKYEPVNFANA 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 EE A+ RCDAYT D S LY + P + V+LP+IISK PL PA+ QGD W+N Sbjct: 181 EEAVRAFEGGRCDAYTTDASGLYVERQRLADPEDSVVLPEIISKEPLGPAVRQGDDGWFN 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 +V WT +A+V AEELG+T KN+++ +K + P+V+R LG + N GE LGL DW YRI Sbjct: 241 VVKWTLFALVNAEELGVTSKNVDEKAK-SDRPEVRRLLGFE--GNFGEPLGLDADWAYRI 297 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++H+GNYGE+FDRNLG+ S LKI RG NALW+KGGL YAPPIR Sbjct: 298 VKHVGNYGEIFDRNLGDSSPLKIKRGINALWTKGGLQYAPPIR 340 >gi|298291387|ref|YP_003693326.1| cationic amino acid ABC transporter periplasmic protein [Starkeya novella DSM 506] gi|296927898|gb|ADH88707.1| cationic amino acid ABC transporter, periplasmic binding protein [Starkeya novella DSM 506] Length = 339 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 164/340 (48%), Positives = 230/340 (67%), Gaps = 2/340 (0%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + + S A+ L +K +GF++CG++ GL GF+ G+W G DVD Sbjct: 2 KRLLSTFAIAGAFGLCAVSAQAAKLDQVKSKGFIQCGVSQGLPGFSTPDDKGNWTGLDVD 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 FCRA+++A+F+DP+K+++ PL+AK+RF ALQS IDILSRNT WT+ R+ SLGL F +T Sbjct: 62 FCRAVAAAVFNDPTKVKFTPLSAKDRFTALQSGDIDILSRNTTWTITRDTSLGLNFTGVT 121 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQGF++ K K ++S +LSGAS+C Q GTTTE LADYF+A+NM Y I F +E+ Sbjct: 122 YYDGQGFMIRKDKKVNSALELSGASVCTQTGTTTEQNLADYFRANNMTYEVIAFATNDEV 181 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 AY A RCD T D S L +L P +HV+LP+IISK PL P + GD +W++IV Sbjct: 182 VKAYDAGRCDVLTTDRSGLAGERLKLTNPDDHVVLPEIISKEPLGPVVAHGDDQWFDIVK 241 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 W +A + AEELG+T KN+++ K TNP+++R +G + GE +G+ DW Y++I+ Sbjct: 242 WVLFAQINAEELGVTSKNVDEQLKSATNPEIKRLVGTE--GKFGEGMGIGNDWAYQVIKG 299 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEM+DRN+G + LK+ RG NALW+KGG Y PIR Sbjct: 300 VGNYGEMYDRNVGPATPLKLERGANALWTKGGQQYGMPIR 339 >gi|330504740|ref|YP_004381609.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01] gi|328919026|gb|AEB59857.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01] Length = 342 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 172/342 (50%), Positives = 240/342 (70%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + F+ + L ++K+GF++CGI+ GL GF+ G++ G D Sbjct: 3 MVKSTLAVLTTAAVLGVSGFAQAGATLDAVQKKGFVQCGISDGLPGFSYADEKGNYLGLD 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A+F D +K++Y PL AKERF ALQS ++DILSRNT WT R+ +LGL F Sbjct: 63 VDVCRAVAAAVFGDATKVKYSPLTAKERFTALQSGEVDILSRNTTWTSSRDAALGLNFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DGQGF+++KK G+SS +L GA++C+QAGTTTEL L+DYF+A+ MKY PI ++ + Sbjct: 123 VTYYDGQGFLVNKKLGVSSAKELDGATVCIQAGTTTELNLSDYFRANGMKYTPITYDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + A RCD T D S LYA ++ P ++V+LP++ISK PL P++ QGD EW++I Sbjct: 183 ESAKSVEAGRCDVLTSDQSQLYAQRIKLANPDDYVVLPEVISKEPLGPSVRQGDEEWFDI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEELG+T N+ + +K T NPDV R LG + G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEELGVTSANVEETAKTTKNPDVARLLGAE--GEFGKDLKLPKDWAVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE FDRN+G SELKI RG NALW+KGGL YAPP+R Sbjct: 301 KQVGNYGESFDRNVGAGSELKIERGLNALWNKGGLQYAPPVR 342 >gi|146308575|ref|YP_001189040.1| extracellular solute-binding protein [Pseudomonas mendocina ymp] gi|145576776|gb|ABP86308.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas mendocina ymp] Length = 342 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 171/342 (50%), Positives = 237/342 (69%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + F+ + L ++K+GF++CGI+ GL GF+ G++ G D Sbjct: 3 MVKSTLAVLTTAAVLGVSGFAQAGATLDAVQKKGFVQCGISDGLPGFSYADEKGNYLGLD 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A+F D +K++Y PL AKERF ALQS ++DILSRNT WT R+ LGL F Sbjct: 63 VDVCRAVAAAVFGDATKVKYSPLTAKERFTALQSGEVDILSRNTTWTSSRDSGLGLNFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF+++KK G+SS +L GA++C+QAGTTTEL L+DYF+A+ +KY PI ++ + Sbjct: 123 VNYYDGQGFLVNKKLGVSSAKELDGATVCIQAGTTTELNLSDYFRANGLKYTPITYDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + A RCD T D S LYA ++ P ++V+LP++ISK PL P + QGD EW+NI Sbjct: 183 ESAKSVEAGRCDVLTSDQSQLYAQRIKLANPDDYVVLPEVISKEPLGPVVRQGDDEWFNI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ +AMV AEELG+T N+ + +K T NPDV R LG + G+ L L KDW +I+ Sbjct: 243 VRWSLFAMVNAEELGVTSANVEETAKTTKNPDVARLLGAE--GEFGKDLKLPKDWAVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE FDRN+G SELKI RG NALW+KGGL YAPP+R Sbjct: 301 KQVGNYGESFDRNVGAGSELKIERGLNALWNKGGLQYAPPVR 342 >gi|153009884|ref|YP_001371099.1| cationic amino acid ABC transporter periplasmic-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151561772|gb|ABS15270.1| cationic amino acid ABC transporter, periplasmic binding protein [Ochrobactrum anthropi ATCC 49188] Length = 343 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 186/344 (54%), Positives = 251/344 (72%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFD Sbjct: 1 MKKTLMTGVLGAAALFSVASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ +LGL F Sbjct: 61 VDYCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTALGLDFAG 120 Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I YFDGQGF++ K GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE+ Sbjct: 121 INYFDGQGFMINSKKLSGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEK 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD++W Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDSKWA 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG++ + IG LGL DW + Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGVEADTKIGTDLGLDNDWVVK 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I++ +GNYGE+F+RN+G S LKI RG NA W+KGGL Y P+R Sbjct: 300 IVKGVGNYGEIFERNIGASSPLKIARGINAQWNKGGLQYGVPVR 343 >gi|148255314|ref|YP_001239899.1| putative amino-acid ABC transporter substrate-binding protein [Bradyrhizobium sp. BTAi1] gi|146407487|gb|ABQ35993.1| general L-amino acid-binding protein [Bradyrhizobium sp. BTAi1] Length = 338 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 174/342 (50%), Positives = 239/342 (69%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L + S A L +K RG L CG++ GL GF+ G+W G D Sbjct: 1 MKRVTLALTFALAPIL-ASVGAQADTLKTVKDRGMLACGVSQGLPGFSSPDDKGNWTGID 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++AIF+DP+KI+++PL+AK+RF ALQS +ID+LSRNT WTL R+ SLG F Sbjct: 60 VDVCRAVAAAIFNDPTKIKFVPLSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGANFAG 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DGQGF++ K ++S +L+ AS+CVQ GTTTE LADYFKA+ MKY I F + Sbjct: 120 VTYYDGQGFMVKKALKVNSALELNSASVCVQTGTTTEQNLADYFKANKMKYEVIAFAGAD 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AY + RCD YT D+S LYA +L P++HV+LP++ISK PL P + GD +W++I Sbjct: 180 ETVKAYESGRCDVYTTDVSGLYAERLKLANPADHVVLPEVISKEPLGPMVRHGDDQWFDI 239 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A+VTAEELG+TQ N+++++K + P+ +R G D N+GE LGLTKDW RI+ Sbjct: 240 VKWTLFALVTAEELGVTQANVDEMAK-SDKPEFKRAFGTD--GNLGEQLGLTKDWFSRIV 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+++RN+G S+L+I RG N LW+KGGL YAPPIR Sbjct: 297 KAVGNYGEVYERNVGAGSKLQIARGLNQLWNKGGLQYAPPIR 338 >gi|150396327|ref|YP_001326794.1| cationic amino acid ABC transporter periplasmic binding protein [Sinorhizobium medicae WSM419] gi|150027842|gb|ABR59959.1| cationic amino acid ABC transporter, periplasmic binding protein [Sinorhizobium medicae WSM419] Length = 341 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 188/342 (54%), Positives = 267/342 (78%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +++ ++ S++ +A+ L D+K +GF++CG+NTGL GFA A+GDW GFD Sbjct: 1 MARTILTALVSAAVMGVGSYAASAATLDDVKAKGFVQCGVNTGLAGFAAPNASGDWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C+A+++A+F D +K++Y PL+AKERF ALQS ++D+L+RNT W++ R+ +LG FRP Sbjct: 61 VDYCKAIAAAVFGDATKVKYTPLSAKERFPALQSGEVDVLARNTTWSINRDTALGFNFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ + S +LSGA++CVQ GTTTEL LADYFKA+N++Y+P+VFE++E Sbjct: 121 VNYYDGQGFMVRKELDVKSALELSGAAVCVQTGTTTELNLADYFKANNLQYNPVVFEKLE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY+L+LT +P +H++LP+IISK PLAPA+ QGD +W++I Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLSKPDDHIVLPEIISKEPLAPAVRQGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSW HYA+V AEE G+TQ N+ ++ K + NPDVQRFLG++ S IG LGLT +W I+ Sbjct: 241 VSWVHYALVQAEEFGVTQANVEEMKK-SANPDVQRFLGVEADSKIGTDLGLTNEWAVNIV 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRN+G S LKI RG NALW+KGGL YAPP+R Sbjct: 300 KAVGNYGEVFDRNIGAGSPLKIERGLNALWNKGGLQYAPPVR 341 >gi|110633466|ref|YP_673674.1| cationic amino acid ABC transporter, periplasmic binding protein [Mesorhizobium sp. BNC1] gi|110284450|gb|ABG62509.1| general L-amino acid-binding protein [Chelativorans sp. BNC1] Length = 340 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 166/340 (48%), Positives = 245/340 (72%), Gaps = 3/340 (0%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + ++L +++ +A+ L D+K RG L+CG+NTGL GFA GDW+G DVD+ Sbjct: 3 NLIKALLGTVVIASAVIPASAATLDDVKNRGALRCGVNTGLPGFAFQNDQGDWQGLDVDY 62 Query: 64 CRALSSAIF-DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 C+A+++A+F D +K+QY PL+A +RF ALQ+ ++D+L+RNT WT+ R+ +LGL F + Sbjct: 63 CKAVAAAVFEGDATKVQYSPLSAVQRFPALQNNEVDLLARNTTWTMNRDTALGLNFVGVN 122 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQGF++ + ++S QLSGA++CVQ+GTTTEL L DYF+A+NM+++P+V E+ ++ Sbjct: 123 YYDGQGFMVRQDLNVTSALQLSGATVCVQSGTTTELNLTDYFRANNMEFNPVVIEQQSDV 182 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 ++AY RCD T D S LYA +L P +HV+LP+IISK PL P + QGD +W++IV Sbjct: 183 NSAYEQGRCDVLTTDASGLYASRLELSNPDDHVVLPEIISKEPLGPVVRQGDEQWFDIVK 242 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 W H+ ++ AEELG+TQ N+ ++ ++ NPDV+R LG D G+ +GLT DW +I+ Sbjct: 243 WVHFGLINAEELGVTQDNVEDMAANSENPDVRRLLGAD--GTFGQDVGLTNDWMVNVIKA 300 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+FDRN+G + LKI RG NALW+KGGL YAPP+R Sbjct: 301 VGNYGEIFDRNVGPNTPLKIQRGLNALWTKGGLQYAPPVR 340 >gi|23501628|ref|NP_697755.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella suis 1330] gi|148560716|ref|YP_001258723.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella ovis ATCC 25840] gi|161618711|ref|YP_001592598.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella canis ATCC 23365] gi|163843013|ref|YP_001627417.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella suis ATCC 23445] gi|225627243|ref|ZP_03785280.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella ceti str. Cudo] gi|254704068|ref|ZP_05165896.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella suis bv. 3 str. 686] gi|254718861|ref|ZP_05180672.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp. 83/13] gi|256060862|ref|ZP_05451022.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella neotomae 5K33] gi|256369174|ref|YP_003106682.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella microti CCM 4915] gi|260168486|ref|ZP_05755297.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. F5/99] gi|260566684|ref|ZP_05837154.1| cationic amino acid ABC transporter [Brucella suis bv. 4 str. 40] gi|261324858|ref|ZP_05964055.1| cationic amino acid ABC transporter [Brucella neotomae 5K33] gi|261754726|ref|ZP_05998435.1| cationic amino acid ABC transporter [Brucella suis bv. 3 str. 686] gi|261757954|ref|ZP_06001663.1| cationic amino acid ABC transporter [Brucella sp. F5/99] gi|265983846|ref|ZP_06096581.1| cationic amino acid ABC transporter [Brucella sp. 83/13] gi|306837636|ref|ZP_07470506.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp. NF 2653] gi|306842009|ref|ZP_07474682.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp. BO2] gi|306843688|ref|ZP_07476288.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp. BO1] gi|23347545|gb|AAN29670.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella suis 1330] gi|148371973|gb|ABQ61952.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella ovis ATCC 25840] gi|161335522|gb|ABX61827.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella canis ATCC 23365] gi|163673736|gb|ABY37847.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella suis ATCC 23445] gi|225617248|gb|EEH14293.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella ceti str. Cudo] gi|255999334|gb|ACU47733.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella microti CCM 4915] gi|260156202|gb|EEW91282.1| cationic amino acid ABC transporter [Brucella suis bv. 4 str. 40] gi|261300838|gb|EEY04335.1| cationic amino acid ABC transporter [Brucella neotomae 5K33] gi|261737938|gb|EEY25934.1| cationic amino acid ABC transporter [Brucella sp. F5/99] gi|261744479|gb|EEY32405.1| cationic amino acid ABC transporter [Brucella suis bv. 3 str. 686] gi|264662438|gb|EEZ32699.1| cationic amino acid ABC transporter [Brucella sp. 83/13] gi|306275998|gb|EFM57707.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp. BO1] gi|306287850|gb|EFM59270.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp. BO2] gi|306407285|gb|EFM63494.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp. NF 2653] Length = 343 Score = 374 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 188/344 (54%), Positives = 250/344 (72%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFD Sbjct: 1 MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F Sbjct: 61 VDYCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAG 120 Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I Y+DGQGF++ K GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE+ Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEK 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW + Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343 >gi|222085840|ref|YP_002544371.1| general L-amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221723288|gb|ACM26444.1| general L-amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 344 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 183/342 (53%), Positives = 267/342 (78%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L ++ +AS L D+K +GF++CG+NT L+GF++ A+G++ GFD Sbjct: 4 MKKIALSAFLGAAALAYSVSGASASTLSDVKAKGFVQCGVNTALLGFSQPDASGNYSGFD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD C+A+++A+F D +K++Y L++K+RF ALQS +ID+LSRNT WTL R+ +LGL FRP Sbjct: 64 VDMCKAVAAAVFGDVTKVKYTALSSKDRFTALQSGEIDLLSRNTTWTLNRDTALGLNFRP 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DGQGF++ K+ + S +LSGA++CVQ+GTTTEL LADYFK++N++Y+P+VF+++E Sbjct: 124 VTYYDGQGFMVRKELNVKSALELSGAAVCVQSGTTTELNLADYFKSNNLQYNPVVFDKLE 183 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY + RCD YT D S LY+L+LT P ++V+LP+IISK PL PA+ QGD +W++I Sbjct: 184 EVNAAYDSGRCDVYTTDQSGLYSLRLTLKNPDDNVVLPEIISKEPLGPAVRQGDDQWFDI 243 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V+WT YA++ AEE GITQKN++++ K + NPD++RFLG ++ S +G +GLT DW Y +I Sbjct: 244 VTWTAYALINAEEFGITQKNVDEM-KSSANPDIKRFLGAEQGSTLGTDMGLTNDWAYNVI 302 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRN+G S LKI RG NALW+KGG+ YAPP+R Sbjct: 303 KGVGNYGEVFDRNIGAGSPLKIARGLNALWNKGGIQYAPPVR 344 >gi|83648448|ref|YP_436883.1| amino acid ABC transporter periplasmic protein [Hahella chejuensis KCTC 2396] gi|83636491|gb|ABC32458.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Hahella chejuensis KCTC 2396] Length = 339 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 170/342 (49%), Positives = 236/342 (69%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++ L + T + L +KK+GF++CG++TGL GF+ G+W G D Sbjct: 1 MKKTFVSAVAALGFMTATGAAMADGTLDAVKKKGFVQCGVSTGLPGFSNPDDKGNWMGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F Sbjct: 61 VDLCRAVAAATLGDASKVKYIPLTAKERFTALQSGEIDLLSRNTTWTLTRDGSLGLNFAG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+ S +L GA++C+QAGTTTEL LADYF+ MKY P+VF+ + Sbjct: 121 VNYYDGQGFLVSKDLGVKSAKELDGAAVCIQAGTTTELNLADYFREFGMKYQPVVFDTSD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + A RCD T D S LYAL++ P + ++LP++ISK PL P + QGD +W+NI Sbjct: 181 QTVKGFEAGRCDVLTSDQSQLYALRIQLSNPDKAMVLPEVISKEPLGPVVRQGDDQWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ +A +TAEELG++ N++++ K +TNP+VQR LG + G+ LGL W + I+ Sbjct: 241 VKWSLFAAITAEELGVSSDNVDKM-KSSTNPNVQRLLGAEAGQ--GKNLGLDDTWAFNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGEMF+RN+G S L I RG NALW+KGGL YAPPIR Sbjct: 298 KQVGNYGEMFERNVGKSSPLGIERGLNALWTKGGLQYAPPIR 339 >gi|256159474|ref|ZP_05457242.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella ceti M490/95/1] gi|256254760|ref|ZP_05460296.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella ceti B1/94] gi|261221938|ref|ZP_05936219.1| cationic amino acid ABC transporter [Brucella ceti B1/94] gi|265997901|ref|ZP_06110458.1| cationic amino acid ABC transporter [Brucella ceti M490/95/1] gi|260920522|gb|EEX87175.1| cationic amino acid ABC transporter [Brucella ceti B1/94] gi|262552369|gb|EEZ08359.1| cationic amino acid ABC transporter [Brucella ceti M490/95/1] Length = 343 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 186/344 (54%), Positives = 248/344 (72%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFD Sbjct: 1 MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F Sbjct: 61 VDSCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAG 120 Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I Y+DGQGF++ K I+S QLSGASICVQAG+TTEL +ADYF+A+ M+Y+P+VFE+ Sbjct: 121 INYYDGQGFMINSKKLADINSALQLSGASICVQAGSTTELNMADYFRANKMEYNPVVFEK 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW + Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343 >gi|254709861|ref|ZP_05171672.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella pinnipedialis B2/94] gi|256031353|ref|ZP_05444967.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella pinnipedialis M292/94/1] gi|261317400|ref|ZP_05956597.1| cationic amino acid ABC transporter [Brucella pinnipedialis B2/94] gi|265988437|ref|ZP_06100994.1| cationic amino acid ABC transporter [Brucella pinnipedialis M292/94/1] gi|261296623|gb|EEY00120.1| cationic amino acid ABC transporter [Brucella pinnipedialis B2/94] gi|264660634|gb|EEZ30895.1| cationic amino acid ABC transporter [Brucella pinnipedialis M292/94/1] Length = 343 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 188/344 (54%), Positives = 250/344 (72%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFD Sbjct: 1 MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNNKGEWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F Sbjct: 61 VDYCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAG 120 Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I Y+DGQGF++ K GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE+ Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEK 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW + Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343 >gi|182678577|ref|YP_001832723.1| cationic amino acid ABC transporter, periplasmic binding protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182634460|gb|ACB95234.1| cationic amino acid ABC transporter, periplasmic binding protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 336 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 181/342 (52%), Positives = 240/342 (70%), Gaps = 6/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+K + L + A L ++K RGFL CG N GL GF G W GFD Sbjct: 1 MFKSIVSAGL---FSLCVTTGALAGTLDEVKGRGFLNCGSNPGLAGFGLPDDKGQWVGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+++AIFDDP+K+++LPL+ K+RF ALQS +IDILSRNT WT RE+ G F Sbjct: 58 IDFCRAVAAAIFDDPTKVKFLPLSGKDRFTALQSGEIDILSRNTTWTQSREVGQGFLFTG 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ITY+DGQGF+ H+K ++S +L+GASICVQ GTTTEL LAD+F+A+N++Y P+ F + Sbjct: 118 ITYYDGQGFMTHRKLNLTSALELAGASICVQQGTTTELNLADFFRANNLQYEPVNFATGD 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AY RCDA T D S LYA + P +HV+LP+IISK PL P + QGD +W+N+ Sbjct: 178 EALKAYDTGRCDALTTDASGLYAQRAKLANPDDHVVLPEIISKEPLGPLVRQGDDQWFNL 237 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W H+A + AEE G+T KN+++ +K + +P+++R LG + N GE LGLT+DW YRII Sbjct: 238 VKWVHFAWLNAEEDGVTSKNLDEKTK-SESPEIKRLLGFE--GNFGEGLGLTRDWIYRII 294 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +H+GNYGE+FDRNLG S+LKI RG N LW+KGGL YAPP+R Sbjct: 295 KHVGNYGEVFDRNLGEGSKLKIKRGINNLWTKGGLHYAPPVR 336 >gi|254713861|ref|ZP_05175672.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella ceti M644/93/1] gi|254717082|ref|ZP_05178893.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella ceti M13/05/1] gi|261218893|ref|ZP_05933174.1| cationic amino acid ABC transporter [Brucella ceti M13/05/1] gi|261321608|ref|ZP_05960805.1| cationic amino acid ABC transporter [Brucella ceti M644/93/1] gi|260923982|gb|EEX90550.1| cationic amino acid ABC transporter [Brucella ceti M13/05/1] gi|261294298|gb|EEX97794.1| cationic amino acid ABC transporter [Brucella ceti M644/93/1] Length = 343 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 187/344 (54%), Positives = 249/344 (72%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFD Sbjct: 1 MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F Sbjct: 61 VDYCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAG 120 Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I Y+DGQGF++ K GI+S QLSGASICVQ GTTTEL +ADYF+A+ M+Y+P+VFE+ Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQVGTTTELNMADYFRANKMEYNPVVFEK 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW + Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAEWNKGGLQYGIPVR 343 >gi|146340850|ref|YP_001205898.1| putative amino-acid ABC transporter substrate-binding protein [Bradyrhizobium sp. ORS278] gi|146193656|emb|CAL77673.1| putative amino-acid ABC transporter, substrate-binding protein [Bradyrhizobium sp. ORS278] Length = 338 Score = 372 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 174/342 (50%), Positives = 240/342 (70%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L L + S A L +K RG L CG++ GL GF+ G+W G D Sbjct: 1 MKRVTLALTLALAPVL-ASVGAQAETLKTVKDRGMLACGVSQGLPGFSNPDDKGNWTGLD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++AIF+DP+K++Y+PL+AK+RF ALQS ++D+LSRNT WTL R+ SLG F Sbjct: 60 VDVCRAIAAAIFNDPTKVKYVPLSAKDRFTALQSGEVDVLSRNTTWTLSRDTSLGANFAG 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ITY+DGQGF++ K ++S +L+ AS+CVQ GTTTE LADYFKA+ MKY I F + Sbjct: 120 ITYYDGQGFMVKKALKVNSALELNSASVCVQTGTTTEQNLADYFKANKMKYEVIAFAGAD 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AY + RCD +T D+S LYA +L P++HV+LP++ISK PL P + GD +W++I Sbjct: 180 ETVKAYESGRCDVFTTDVSGLYAERLKLANPADHVVLPEVISKEPLGPMVRHGDDQWFDI 239 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT + ++TAEE+G+TQ N+++++K + PD +R G D N+GE LGLTKDW RI+ Sbjct: 240 VKWTLFGLITAEEMGVTQANVDEMAK-SDKPDFKRAFGTD--GNLGEQLGLTKDWFSRIV 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGEM+DRN+G+ S+L+I RG N LW+KGGL YAPPIR Sbjct: 297 KAVGNYGEMYDRNVGSGSKLQIARGLNQLWNKGGLQYAPPIR 338 >gi|158423209|ref|YP_001524501.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] gi|158330098|dbj|BAF87583.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] Length = 336 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 174/342 (50%), Positives = 239/342 (69%), Gaps = 6/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I +L T+ + A L D+K RG L CG++ GL GF+ G+WKG D Sbjct: 1 MKRIL---IAVAGVLALTAGAAKAGTLDDVKARGALNCGVSQGLPGFSSPDDKGNWKGLD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFCRA+++AIF+DP+K+++ PL+AK+RF ALQS ID+LSRNT WT+ R+ +LG F Sbjct: 58 VDFCRAVAAAIFNDPNKVRFTPLSAKDRFTALQSGAIDLLSRNTTWTMSRDTTLGFNFAG 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGFI+ K I S +L+GASICVQAGTTTEL L D+F+A+NMKY I F + Sbjct: 118 VMYYDGQGFIVRKSLNIKSAKELNGASICVQAGTTTELNLGDFFRANNMKYEVITFSTED 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AY + RCD++T D S +YA+KL ++HV+LP++ISK PL P + GD +W+++ Sbjct: 178 ETVKAYESGRCDSFTSDQSQIYAIKLKLTNAADHVVLPELISKEPLGPLVRHGDDQWFDL 237 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT+YA++ +EELG++QK ++Q S +TNP+++R LG D GE +GLT DW RII Sbjct: 238 VKWTYYALLNSEELGVSQKTLDQ-SMTSTNPEIKRLLGTD--GKFGEGIGLTNDWVVRII 294 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRN+G S L I RG N LW+KGGL Y PIR Sbjct: 295 KAVGNYGEIFDRNVGTGSPLGIDRGENKLWNKGGLQYGMPIR 336 >gi|17987494|ref|NP_540128.1| general L-amino acid-binding periplasmic protein AAPJ precursor [Brucella melitensis bv. 1 str. 16M] gi|254689006|ref|ZP_05152260.1| general L-amino acid-binding periplasmic protein AAPJ precursor [Brucella abortus bv. 6 str. 870] gi|254693490|ref|ZP_05155318.1| general L-amino acid-binding periplasmic protein AAPJ precursor [Brucella abortus bv. 3 str. Tulya] gi|256044431|ref|ZP_05447335.1| general L-amino acid-binding periplasmic protein AAPJ precursor [Brucella melitensis bv. 1 str. Rev.1] gi|256113275|ref|ZP_05454143.1| general L-amino acid-binding periplasmic protein AAPJ precursor [Brucella melitensis bv. 3 str. Ether] gi|256257256|ref|ZP_05462792.1| general L-amino acid-binding periplasmic protein AAPJ precursor [Brucella abortus bv. 9 str. C68] gi|260563783|ref|ZP_05834269.1| cationic amino acid ABC transporter [Brucella melitensis bv. 1 str. 16M] gi|260754500|ref|ZP_05866848.1| cationic amino acid ABC transporter [Brucella abortus bv. 6 str. 870] gi|260883528|ref|ZP_05895142.1| cationic amino acid ABC transporter [Brucella abortus bv. 9 str. C68] gi|261213748|ref|ZP_05928029.1| cationic amino acid ABC transporter [Brucella abortus bv. 3 str. Tulya] gi|265990852|ref|ZP_06103409.1| cationic amino acid ABC transporter [Brucella melitensis bv. 1 str. Rev.1] gi|265994687|ref|ZP_06107244.1| cationic amino acid ABC transporter [Brucella melitensis bv. 3 str. Ether] gi|297248104|ref|ZP_06931822.1| general L-amino acid transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] gi|17983192|gb|AAL52392.1| general l-amino acid-binding periplasmic protein aapj precursor [Brucella melitensis bv. 1 str. 16M] gi|260153799|gb|EEW88891.1| cationic amino acid ABC transporter [Brucella melitensis bv. 1 str. 16M] gi|260674608|gb|EEX61429.1| cationic amino acid ABC transporter [Brucella abortus bv. 6 str. 870] gi|260873056|gb|EEX80125.1| cationic amino acid ABC transporter [Brucella abortus bv. 9 str. C68] gi|260915355|gb|EEX82216.1| cationic amino acid ABC transporter [Brucella abortus bv. 3 str. Tulya] gi|262765800|gb|EEZ11589.1| cationic amino acid ABC transporter [Brucella melitensis bv. 3 str. Ether] gi|263001636|gb|EEZ14211.1| cationic amino acid ABC transporter [Brucella melitensis bv. 1 str. Rev.1] gi|297175273|gb|EFH34620.1| general L-amino acid transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] Length = 343 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 187/344 (54%), Positives = 249/344 (72%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFD Sbjct: 1 MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA++SAIF DP+K+++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F Sbjct: 61 VDYCRAVASAIFGDPTKVKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAG 120 Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I Y+DGQGF++ K GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE+ Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEK 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW + Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343 >gi|90424048|ref|YP_532418.1| lysine-arginine-ornithine-binding periplasmic protein [Rhodopseudomonas palustris BisB18] gi|90106062|gb|ABD88099.1| Lysine-arginine-ornithine-binding periplasmic protein [Rhodopseudomonas palustris BisB18] Length = 350 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 166/340 (48%), Positives = 237/340 (69%), Gaps = 3/340 (0%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K +++ + F + + A L ++ RG L CG++ GL GF+ G+W G DVD Sbjct: 14 KRVSLALSVAVAAGFLTQAAGAQTLKTVQDRGVLSCGVSQGLPGFSAPDDKGNWTGIDVD 73 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 CRA+++A+F+DP+K++++PL+AK+RF ALQS +ID+LSRNT WT+ R+ SLG+ F +T Sbjct: 74 VCRAIAAAVFNDPTKVKFVPLSAKDRFTALQSGEIDVLSRNTTWTVSRDTSLGVNFTGVT 133 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQGF++ K ++S +L+ ASICVQ GTT E +ADYFK +NMKY I F +E Sbjct: 134 YYDGQGFLVRKALKVNSALELNSASICVQTGTTNEQNVADYFKGNNMKYEVIAFGTADEA 193 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 AY + RCD +T D+S LYAL+L P++H +LP++ISK PL P + GD +W++IV Sbjct: 194 VKAYESGRCDVFTSDVSQLYALRLKLATPADHAVLPEVISKEPLGPLVRHGDDQWFDIVK 253 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 WT +A++ AEELG+ QKN++ +K P+++R G D N+GE LGLTKDW RI++ Sbjct: 254 WTLFALLNAEELGVNQKNVDDQAKLDK-PELKRVFGTD--GNLGEQLGLTKDWVIRIVKA 310 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+FDRN+G S+L I RG N LW+KGG+ YAPPIR Sbjct: 311 TGNYGEIFDRNVGAGSKLGIARGLNQLWNKGGIQYAPPIR 350 >gi|261342745|ref|ZP_05970603.1| general amino acid ABC transporter, periplasmic binding protein [Enterobacter cancerogenus ATCC 35316] gi|288315398|gb|EFC54336.1| general amino acid ABC transporter, periplasmic binding protein [Enterobacter cancerogenus ATCC 35316] Length = 341 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 161/343 (46%), Positives = 236/343 (68%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K S+ +LF + +A L +KK+GF++CGI+ GL GF+ ANG + G Sbjct: 1 MKKTMIASLAAAGVLFAVASQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADANGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT R+ +G++F Sbjct: 61 DVDVCRGVAAAVFGDDSKVKYTPLTAKERFTALQSGEVDMLSRNTTWTSSRDAGMGMSFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA++MKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANSMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD +W++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDEDWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GIT KN+++ + + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGITSKNVDEKAANPSTPDMSHLLGKE--GDFGKDLKLDNKWAYHI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 VKQVGNYGEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|311277770|ref|YP_003940001.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] gi|308746965|gb|ADO46717.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] Length = 341 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 165/343 (48%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K S + +LF + +A IKK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKTTIASFVAAGVLFAIASQAHAGATFDAIKKKGFVQCGISDGLPGFSYADADGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT R+ +GL+F Sbjct: 61 DVDVCRGVAAAVFGDASKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGLSFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P+E V+LP++ISK PL P + +GD EW+ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSKPTEWVVLPEVISKEPLGPVVRRGDDEWFA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI KN+++ + + +NPD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSKNVDEKAANPSNPDMSHLLGKE--GDFGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+FDRN+G S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYAEIFDRNVGADSPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|27379557|ref|NP_771086.1| ABC transporter amino acid-binding protein [Bradyrhizobium japonicum USDA 110] gi|27352709|dbj|BAC49711.1| ABC transporter amino acid-binding protein [Bradyrhizobium japonicum USDA 110] Length = 338 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 171/320 (53%), Positives = 231/320 (72%), Gaps = 3/320 (0%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +A L +K RG L CG++ GL GF+ G+W G DVD CRA+++AIF+DP+K++++P Sbjct: 22 DAQTLKTVKDRGTLSCGVSQGLPGFSAPDDKGNWTGLDVDVCRAIAAAIFNDPTKVKFVP 81 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 +AK+RF ALQS +ID+LSRNT WT+ R+ SLG F +TY+DGQGF++ K ++S + Sbjct: 82 TSAKDRFTALQSGEIDVLSRNTTWTISRDTSLGANFTGVTYYDGQGFMVKKSLKVNSALE 141 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+ AS+CVQ GTTTE LADYFKA+NMKY I F +E AY A RCD +T D S LY Sbjct: 142 LNSASVCVQTGTTTEQNLADYFKANNMKYEVIAFGTNDETVKAYEAGRCDVFTTDQSGLY 201 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 A +L P++H++LP+IISK PL P + GD +W++IV WT +A+VT EELG+T KN++ Sbjct: 202 ANRLKLANPNDHMVLPEIISKEPLGPMVRHGDDQWFDIVKWTLFALVTTEELGVTSKNVD 261 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 + +K +P+++R LG D N GE LGLTKDW RI++ +GNYGE+FDRN+G S L I Sbjct: 262 EKAK-LESPELKRVLGSD--GNFGEQLGLTKDWVVRIVKAVGNYGEVFDRNVGAGSPLAI 318 Query: 323 PRGYNALWSKGGLMYAPPIR 342 RG N LW+KGGL YAPPIR Sbjct: 319 NRGLNNLWNKGGLQYAPPIR 338 >gi|327479738|gb|AEA83048.1| extracellular solute-binding protein [Pseudomonas stutzeri DSM 4166] Length = 342 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 165/325 (50%), Positives = 236/325 (72%), Gaps = 2/325 (0%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + + + L ++K+GF++CGI+ GL GF+ A G ++G DVD CRA+++A+F D +K Sbjct: 20 SGLAQAGATLDAVQKKGFVQCGISDGLPGFSFADAKGQFQGIDVDVCRAVAAAVFGDATK 79 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++Y PL AKERF ALQS ++D+LSRNT WT R+ ++GL F +TY+DGQGF+++K+ G+ Sbjct: 80 VKYSPLTAKERFTALQSGEVDVLSRNTTWTSSRDAAMGLNFTGVTYYDGQGFLVNKELGV 139 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 SS +L GA++C+QAGTTTEL L+DYF+A+ KY PI ++ +E + + RCD T D Sbjct: 140 SSAKELDGATVCIQAGTTTELNLSDYFRANGHKYTPITYDTSDESAKSLESGRCDVLTSD 199 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 S LYA ++ +P ++V+LP++ISK PL PA+ QGD EW++IV WT +AM+ AEELG+T Sbjct: 200 QSQLYAQRIKLAKPDDYVVLPEVISKEPLGPAVRQGDEEWFDIVRWTLFAMLNAEELGVT 259 Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317 N+ ++K T NPDV R LG + G+ L L KDW +I++ +GNYGE+FDRN+G Sbjct: 260 SANVEDMAKSTKNPDVARLLGAE--GEYGKDLRLPKDWAVQIVKQVGNYGEIFDRNVGAG 317 Query: 318 SELKIPRGYNALWSKGGLMYAPPIR 342 SELKI RG NALW+KGGL YAPP+R Sbjct: 318 SELKIERGLNALWNKGGLQYAPPVR 342 >gi|91977030|ref|YP_569689.1| lysine-arginine-ornithine-binding periplasmic protein [Rhodopseudomonas palustris BisB5] gi|91683486|gb|ABE39788.1| Lysine-arginine-ornithine-binding periplasmic protein [Rhodopseudomonas palustris BisB5] Length = 338 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 171/342 (50%), Positives = 240/342 (70%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + + F + S A L +K RG L CG++ GL GF+ G+W G D Sbjct: 1 MKRVSLAAAVAITA-CFAAQSAGAQTLKTVKDRGLLSCGVSQGLPGFSAPDDKGNWTGLD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++AIFDDPSK++++PL+AK+RF ALQS +ID+LSRNT WT+ R+ SLG+ F Sbjct: 60 VDLCRAVAAAIFDDPSKVKFVPLSAKDRFTALQSGEIDVLSRNTTWTVSRDTSLGVNFAG 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ++Y+DGQGF++ K ++S +L+ ASICVQ GTT E +ADYFK +NMKY I F + Sbjct: 120 VSYYDGQGFLVKKALKVNSALELNSASICVQTGTTNEQNVADYFKGNNMKYEVIAFANAD 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AY + RCD +T D+S LYA +L P++HV+LP++ISK PL P + GD +W++I Sbjct: 180 EAIKAYESGRCDVFTSDVSQLYAQRLKVTTPADHVVLPEVISKEPLGPLVRHGDDQWFDI 239 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A+V AEELG+TQ N+ +++K + P+++R G D N+GE LGLTKDW RI+ Sbjct: 240 VKWTLFALVNAEELGVTQSNVGEMAK-SDKPELKRVFGSD--GNLGEQLGLTKDWVARIV 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + GNYGE F+RN+G S+L+I RG N LW+KGG+MYAPPIR Sbjct: 297 KATGNYGESFERNVGTGSKLEIARGLNKLWNKGGIMYAPPIR 338 >gi|260596110|ref|YP_003208681.1| putative amino-acid ABC transporter-binding protein yhdW [Cronobacter turicensis z3032] gi|260215287|emb|CBA27219.1| Putative amino-acid ABC transporter-binding protein yhdW [Cronobacter turicensis z3032] Length = 353 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 162/343 (47%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ LF + +A L +KK+GF++CGI+ GL GF+ A G + G Sbjct: 13 MKKMMIATLAAAGTLFAVANQAHAGATLDSVKKKGFVQCGISDGLPGFSYADAGGKFTGI 72 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT R+ +G++F Sbjct: 73 DVDVCRGVAAAVFGDASKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDAGMGMSFT 132 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 133 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 192 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 193 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDEEWFS 252 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI KN++ + + + PD+ LG + + G+ L L W Y I Sbjct: 253 IVRWTLFAMLNAEEMGIDSKNVDAKAANPSTPDMAHLLGKE--GDYGKDLKLDNKWAYNI 310 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNYGE+F+RN+G +S LKI RG N LW+KGG+ YAPP+R Sbjct: 311 IKQVGNYGEIFERNVGQESPLKIKRGQNNLWNKGGIQYAPPVR 353 >gi|225852259|ref|YP_002732492.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella melitensis ATCC 23457] gi|256264234|ref|ZP_05466766.1| cationic amino acid ABC transporter [Brucella melitensis bv. 2 str. 63/9] gi|225640624|gb|ACO00538.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella melitensis ATCC 23457] gi|263094479|gb|EEZ18301.1| cationic amino acid ABC transporter [Brucella melitensis bv. 2 str. 63/9] Length = 343 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 187/344 (54%), Positives = 248/344 (72%), Gaps = 3/344 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFD Sbjct: 1 MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA++SAIF DP+K+++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F Sbjct: 61 VDYCRAVASAIFGDPTKVKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAG 120 Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I Y+DGQGF++ K GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P VFE+ Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPAVFEK 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +EE +AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW + Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343 >gi|296104983|ref|YP_003615129.1| general L-amino acid transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059442|gb|ADF64180.1| general L-amino acid transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 341 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 161/343 (46%), Positives = 234/343 (68%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K S+ +LF + +A L +KK+GF++CGI+ GL GF+ ANG + G Sbjct: 1 MKKTMIASLAAAGMLFAVAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADANGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT R+ +G++F Sbjct: 61 DVDVCRGVAAAVFGDDSKVKYTPLTAKERFTALQSGEVDMLSRNTTWTSSRDAGMGMSFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD +W++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDEDWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI+ KN+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGISSKNVDEKAAKPSTPDMAHLLGTE--GDFGKDLKLDNKWAYHI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYAEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|299133835|ref|ZP_07027029.1| cationic amino acid ABC transporter, periplasmic binding protein [Afipia sp. 1NLS2] gi|298591671|gb|EFI51872.1| cationic amino acid ABC transporter, periplasmic binding protein [Afipia sp. 1NLS2] Length = 339 Score = 369 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 169/342 (49%), Positives = 238/342 (69%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +F ++ + L S + L +++RG L CG++ GL GF+ G W G D Sbjct: 1 MKYGWFGIVMTSVFLGSLSPVNAQATLKAVQERGVLSCGVSQGLPGFSAPDDTGKWSGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFCRAL++ + +DP K++++PL+AK+RF ALQS +ID+LSRNT W+L R+ SLGL F Sbjct: 61 VDFCRALAAVVLNDPLKVKFVPLSAKDRFTALQSGEIDVLSRNTTWSLSRDTSLGLNFTA 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K ++S +L+GAS+CVQ GTT E LADYF+A+NMKY + F + Sbjct: 121 VMYYDGQGFLVRKALKVNSALELNGASVCVQTGTTNEQNLADYFRANNMKYEVVAFSTAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AY + RCD +T D+S LYA +L P +HV+LP+IISK PL P + GD +W++I Sbjct: 181 ETIKAYESGRCDVFTSDVSQLYAERLKLTVPDDHVVLPEIISKEPLGPVVRHGDDQWFDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEEL +TQKN+ +++K + P++ R LG D N+GE LGLTKDW RI+ Sbjct: 241 VKWTLFAMINAEELNVTQKNVGEMTK-SNKPEIARLLGTD--GNLGEQLGLTKDWVVRIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE FDRN+G S+L+I RG N LW++GG+ YAPPIR Sbjct: 298 KAVGNYGESFDRNVGAGSKLRISRGLNKLWNQGGIQYAPPIR 339 >gi|283836183|ref|ZP_06355924.1| general amino acid ABC transporter, periplasmic binding protein [Citrobacter youngae ATCC 29220] gi|291067534|gb|EFE05643.1| general amino acid ABC transporter, periplasmic binding protein [Citrobacter youngae ATCC 29220] Length = 341 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 160/343 (46%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K S+ +L + +A L +KK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMIIASLAAAGVLLAIANQAHAGATLDAVKKKGFVQCGISDGLPGFSYADASGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR ++SA+F D SK++Y PL AKERF ALQS ++D+LSRNT WT R+ +G++F Sbjct: 61 DVDVCRGVASAVFGDDSKVKYTPLTAKERFTALQSGEVDMLSRNTTWTSSRDAGMGMSFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+ KN+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGVNSKNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|209885181|ref|YP_002289038.1| general L-amino acid-binding periplasmic protein AapJ [Oligotropha carboxidovorans OM5] gi|209873377|gb|ACI93173.1| general L-amino acid-binding periplasmic protein AapJ [Oligotropha carboxidovorans OM5] Length = 338 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 172/342 (50%), Positives = 237/342 (69%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +F ++ +I+ + +A L IK RG L CG++ GL GF+ G W G D Sbjct: 1 MKYGWFGIVMTSLIVGGLA-PASAQTLKTIKDRGVLSCGVSQGLPGFSAPDDTGKWSGLD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFCRALS+AIF+DP K++++PL+AK+RF ALQS +ID+LSRNT W++ R+ SLGL F Sbjct: 60 VDFCRALSAAIFNDPLKVKFVPLSAKDRFTALQSGEIDVLSRNTTWSMSRDTSLGLNFTA 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K ++S +L+GAS+CVQ GTT E LADYF+A+ MKY + F + Sbjct: 120 VMYYDGQGFLVRKSLKVNSALELNGASVCVQTGTTNEQNLADYFRANGMKYEVVAFATAD 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AY + RCDA+T D+S LYA +L P +H +LPDIISK PL P + GD +W++I Sbjct: 180 ETMKAYESGRCDAFTSDVSQLYAERLKLTVPDDHAVLPDIISKEPLGPVVRHGDDQWFDI 239 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEEL +TQKN+ + K + P++ R LG D N GE LGLTKDW RI+ Sbjct: 240 VKWTLFALLNAEELAVTQKNVGDMVK-SNKPEIARLLGSD--GNFGEQLGLTKDWVVRIV 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE FDRN+G S+L+I RG N LW++GG+ YAPP+R Sbjct: 297 KAVGNYGESFDRNVGAGSKLRISRGLNKLWNQGGIQYAPPVR 338 >gi|157148848|ref|YP_001456167.1| hypothetical protein CKO_04681 [Citrobacter koseri ATCC BAA-895] gi|157086053|gb|ABV15731.1| hypothetical protein CKO_04681 [Citrobacter koseri ATCC BAA-895] Length = 341 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K S+ + +L + +A L +KK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIASLAAVGVLLAVANQAHAGATLDAVKKKGFVQCGISDGLPGFSYADASGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G++F Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMSFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ MKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSDPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 +V WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 VVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYAEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|146313341|ref|YP_001178415.1| extracellular solute-binding protein [Enterobacter sp. 638] gi|145320217|gb|ABP62364.1| amino acid ABC transporter substrate-binding protein, PAAT family [Enterobacter sp. 638] Length = 341 Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats. Identities = 162/343 (47%), Positives = 231/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K S+ +LF + +A L +KK+GF++CGI+ GL GF+ ANG + G Sbjct: 1 MKKTMIASLAAAGMLFAVAGQAHAGATLDAVKKKGFVQCGISDGLPGFSYADANGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+ F Sbjct: 61 DVDVCRGVAAALFGDDTKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDAGMGMTFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ MKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW + Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDEEWTS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI KN+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVKWTLFAMLNAEEMGINSKNVDEKAAAPSTPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+H+GNYGE+F RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKHVGNYGEIFARNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|92117599|ref|YP_577328.1| extracellular solute-binding protein [Nitrobacter hamburgensis X14] gi|91800493|gb|ABE62868.1| amino acid ABC transporter substrate-binding protein, PAAT family [Nitrobacter hamburgensis X14] Length = 344 Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats. Identities = 171/347 (49%), Positives = 237/347 (68%), Gaps = 8/347 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M V L S S S L +K RG L CG++ GL GF+ G+ Sbjct: 1 MKCVLAVIFAIAAGLPLQSASAQESAKVKTTLEAVKTRGMLSCGVSQGLPGFSAPDDKGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 W G DVD CRA+++ +F+DP+K++++PL+AK+RF+ALQS +ID+LSRNT WTL R+ SLG Sbjct: 61 WTGLDVDVCRAIAAVVFNDPTKVKFVPLSAKDRFIALQSGEIDVLSRNTTWTLSRDTSLG 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F +TY+DGQGF++ K ++S +L+ AS+CVQ GTTTE LADYFK++ MKY I Sbjct: 121 ANFTGVTYYDGQGFLVRKSLKVNSALELNSASVCVQTGTTTEQNLADYFKSNKMKYEVIA 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F +E AY + RCD +T DIS LYA +L P++H +LP++ISK PL P + GD Sbjct: 181 FSTADETIKAYESGRCDVFTSDISQLYAERLKLSNPADHAVLPEVISKEPLGPMVRHGDD 240 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295 +W+++V WT +AM+ AEELGITQKN+++++K + NP+++R G D N GE LG+TKDW Sbjct: 241 QWFDLVKWTLFAMIDAEELGITQKNVDEMAK-SNNPELKRVFGTD--GNFGEQLGVTKDW 297 Query: 296 TYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 RI++ +GNYGE FDRN+G S+L I RG N LW++GG+ YAPPIR Sbjct: 298 VSRIVKAVGNYGESFDRNVGAGSKLGIARGLNRLWNQGGIQYAPPIR 344 >gi|260463341|ref|ZP_05811542.1| cationic amino acid ABC transporter, periplasmic binding protein [Mesorhizobium opportunistum WSM2075] gi|259030931|gb|EEW32206.1| cationic amino acid ABC transporter, periplasmic binding protein [Mesorhizobium opportunistum WSM2075] Length = 430 Score = 365 bits (938), Expect = 4e-99, Method: Composition-based stats. Identities = 183/342 (53%), Positives = 261/342 (76%), Gaps = 3/342 (0%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + IL L + + +A+ L +K +GF++CG++TGL GF+ GDW+G D D Sbjct: 90 KHIAIGILGAAALGLMASAASATTLDTVKAKGFIQCGVSTGLAGFSAPDDKGDWQGIDAD 149 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 FCRA+++A+F D +K+++ PL+AKERF ALQS ++DILSRNT WT+ R+ +LGL F +T Sbjct: 150 FCRAVAAAVFGDGTKVKFTPLSAKERFTALQSGEVDILSRNTTWTINRDTALGLNFIGVT 209 Query: 123 YFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G++S QLSGA++CVQ+GTTTEL LADYFKA+ M+Y+P+VFE++E Sbjct: 210 YYDGQGFMINAKKLPGVNSALQLSGAAVCVQSGTTTELNLADYFKANKMEYNPVVFEKLE 269 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY ++LT P++HV+LP+IISK PL PA+ QGD +WY+I Sbjct: 270 EVNAAYDAGRCDVYTTDQSGLYGIRLTLGSPADHVVLPEIISKEPLGPAVRQGDDQWYHI 329 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT++A++ AEELGIT+ N++++ K++ +P+++R LG + + IG LG++ DW I+ Sbjct: 330 VKWTYFALLDAEELGITKANVDEM-KNSASPEIKRVLGQEADTKIGTDLGVSNDWVVNIV 388 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGEMFDRN+G+ S LKI RG NALW+KGGL YAPPIR Sbjct: 389 KAVGNYGEMFDRNVGSGSPLKIARGINALWTKGGLQYAPPIR 430 >gi|13476741|ref|NP_108310.1| ABC transporter, amino acid binding protein [Mesorhizobium loti MAFF303099] gi|14027502|dbj|BAB53771.1| ABC transporter, amino acid binding protein [Mesorhizobium loti MAFF303099] Length = 342 Score = 365 bits (936), Expect = 6e-99, Method: Composition-based stats. Identities = 184/342 (53%), Positives = 261/342 (76%), Gaps = 3/342 (0%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + IL L F + + +A+ L +K +GF++CG++TGL GF+ GDW+G D D Sbjct: 2 KHIAIGILGAATLGFMASAASATTLDTVKAKGFIQCGVSTGLAGFSAPDDKGDWQGIDAD 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 FCRA+++A+F D +K+++ PL+AKERF ALQS ++DILSRNT WT+ R+ +LGL F T Sbjct: 62 FCRAVAAAVFGDGTKVKFTPLSAKERFTALQSGEVDILSRNTTWTINRDTALGLNFVGTT 121 Query: 123 YFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G++S QLSGA++CVQ+GTTTEL LADYFKA+ M+Y+P+VFE++E Sbjct: 122 YYDGQGFMINAKKLPGVNSALQLSGAAVCVQSGTTTELNLADYFKANKMEYNPVVFEKLE 181 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY ++LT P++HV+LP+IISK PL PA+ QGD +WY+I Sbjct: 182 EVNAAYDAGRCDVYTTDQSGLYGIRLTLGSPADHVVLPEIISKEPLGPAVRQGDDQWYHI 241 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT++A++ AEELGIT+ N++++ K++ +P+++R LG + + IG LG++ DW I+ Sbjct: 242 VKWTYFALLDAEELGITKANVDEM-KNSASPEIKRVLGQEADTKIGADLGVSNDWVVNIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGEMFDRN+G+ S LKI RG NALW+KGGL YAPPIR Sbjct: 301 KAVGNYGEMFDRNVGSGSPLKIARGINALWTKGGLQYAPPIR 342 >gi|316934242|ref|YP_004109224.1| cationic amino acid ABC transporter periplasmic-binding protein [Rhodopseudomonas palustris DX-1] gi|315601956|gb|ADU44491.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodopseudomonas palustris DX-1] Length = 338 Score = 365 bits (936), Expect = 6e-99, Method: Composition-based stats. Identities = 171/325 (52%), Positives = 236/325 (72%), Gaps = 3/325 (0%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + S +A L +K RG L CG++ GL GF+ G+W G DVD CRA+++AIFDDPSK Sbjct: 17 SVSSADAQTLKTVKDRGMLSCGVSQGLPGFSSPDDKGNWTGLDVDVCRAIAAAIFDDPSK 76 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++++PL+AK+RF ALQS +ID+LSRNT WTL R+ SLG+ F I+Y+DGQGF+ K + Sbjct: 77 VKFVPLSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGVNFAGISYYDGQGFMAKKALKV 136 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +S +L+GASICVQ GTT E +ADYFK +NMKY I F +E AY RCD +T D Sbjct: 137 NSALELNGASICVQTGTTNEQNVADYFKGNNMKYEVIAFANADEAVKAYETGRCDVFTSD 196 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 +S LYA +L P++H++LP++ISK PL P + GD +W++IV WT + ++ AEELG+T Sbjct: 197 VSQLYAQRLKLATPADHIVLPEVISKEPLGPLVRHGDDQWFDIVKWTLFGLINAEELGVT 256 Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317 QKN+++++K + P+++R G D N+GE LGLTKDW RII+ GNYGE F+RN+G+ Sbjct: 257 QKNVDEMAK-SDKPELKRVFGTD--GNLGEQLGLTKDWVARIIKATGNYGESFERNVGSG 313 Query: 318 SELKIPRGYNALWSKGGLMYAPPIR 342 S+L+I RG N LW+KGG+MYAPPIR Sbjct: 314 SKLEIARGLNKLWNKGGIMYAPPIR 338 >gi|70728430|ref|YP_258179.1| general amino acid ABC transporter periplasmic binding protein [Pseudomonas fluorescens Pf-5] gi|68342729|gb|AAY90335.1| general amino acid ABC transporter, periplasmic binding protein [Pseudomonas fluorescens Pf-5] Length = 342 Score = 365 bits (936), Expect = 6e-99, Method: Composition-based stats. Identities = 159/342 (46%), Positives = 230/342 (67%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ +L + F+ + L ++K+GF++CG++ GL GF+ A G G D Sbjct: 3 MLKSTLAAVTAATVLGMSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDATGKILGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +ID+LSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDVLSRNTTWTSSRDAGMGLVFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++KK G+ S +L GA+IC+QAGTTTEL ++DYF+ + +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNKKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + + RCD T D S LYA + P+++V+LP+ ISK PL P + +GD EW++I Sbjct: 183 ESAKSLESGRCDVLTSDKSQLYAQRSKLATPTDYVVLPETISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE G+T KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAGVTSKNVEAEAKSTKNPDVARLLGAD--GEYGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F++NLG + L I RG NALW+ GG+ YAPP+R Sbjct: 301 KQVGNYGEVFEKNLGKSTPLAIDRGLNALWNNGGIQYAPPVR 342 >gi|149376724|ref|ZP_01894482.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Marinobacter algicola DG893] gi|149358963|gb|EDM47429.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Marinobacter algicola DG893] Length = 343 Score = 365 bits (936), Expect = 7e-99, Method: Composition-based stats. Identities = 163/344 (47%), Positives = 229/344 (66%), Gaps = 5/344 (1%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K V L +F S ++ A+ L +K++G L+CG+ +GL GF++ G+W G Sbjct: 3 MKNAKSIAVGAAMLCGVFTASVASAATTLESVKEKGHLQCGVTSGLPGFSQPDDKGNWTG 62 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 DVD CRA+++AIF D +++ PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F Sbjct: 63 IDVDTCRAVAAAIFGDAKAVEFTPLTAKERFTALQSGEIDMLSRNTTWTLTRDASLGLNF 122 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Y+DGQGF+++K G+ +QL GA++C+QAGTTTEL L+DYF+A M+Y PIVF+ Sbjct: 123 AGVNYYDGQGFLVNKGIGVDDATQLDGATVCIQAGTTTELNLSDYFRAKGMEYKPIVFDT 182 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E+ + + RCD T D S L AL+ P ILP+ ISK PL P + QGD +W+ Sbjct: 183 SEQTVQGFASGRCDVLTSDRSQLAALRSKLSDPDSAKILPNTISKEPLGPVVRQGDDQWF 242 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 NIV W + AEELG+T N++ + K + NP++QR LG D ++G LGL D+ + Sbjct: 243 NIVKWVLSVQINAEELGVTSANVDDMLK-SDNPNIQRLLGTD--GDMGAKLGLPADFGAK 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNYGEM+DRN+G + L + RG NALW++GG+MYAPP+R Sbjct: 300 AIKQVGNYGEMYDRNVGPDTPLGLERGINALWTEGGVMYAPPVR 343 >gi|255264624|ref|ZP_05343966.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Thalassiobium sp. R2A62] gi|255106959|gb|EET49633.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Thalassiobium sp. R2A62] Length = 338 Score = 365 bits (936), Expect = 7e-99, Method: Composition-based stats. Identities = 154/342 (45%), Positives = 218/342 (63%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + L + L D+K RG L CG+ TGLVGFA A+G+W+GFD Sbjct: 1 MKKSVFLGALTVAGLAAGMSAAA--TLDDVKARGTLNCGVTTGLVGFAAPDASGEWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VGVCRAVAAAVLGDSNAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF+ K+ G+SS L GA++C+Q GTTTEL LAD+F+A+N+ Y P+ E Sbjct: 119 VNYYDGQGFMAPKELGVSSAKDLDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD +T D S L A + T + P +HV+LP+I+SK PL P + GD EW +I Sbjct: 179 EAQQQYLAGACDVFTTDASGLAATRATFENPGDHVLLPEIVSKEPLGPLVRHGDNEWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++TAEELG+T NI ++S T NP+V R LG + +G LGL W I Sbjct: 239 VRWTLNALITAEELGVTSANIGELSAGTNNPEVNRLLGTE--GELGGMLGLDAAWAKNAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F++N+G + + + RG NA+W++GGL+Y+PP R Sbjct: 297 MAGGNYGEIFEKNIGENTPIGLARGLNAMWTEGGLIYSPPFR 338 >gi|304396995|ref|ZP_07378875.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] gi|304355791|gb|EFM20158.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] Length = 341 Score = 364 bits (935), Expect = 8e-99, Method: Composition-based stats. Identities = 159/343 (46%), Positives = 228/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ L + +A L IKK+GF++CGI+ GL GF+ A G + G Sbjct: 1 MKKMMLSTLIAAASLVGLAQQAHAGTTLDAIKKKGFVQCGISDGLPGFSYADAGGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA ++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G F Sbjct: 61 DVDVCRATAAAVFGDATKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDGGMGFLFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ HKK G+ S +L GA++C+Q+GT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHKKAGLKSAKELDGATVCIQSGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P + ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDDFIVLPEVISKEPLGPLVRRGDDDWFT 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ YAM+ AEE+GI KN++Q++ T PD+ FLG + + G+ L L W Y I Sbjct: 241 IVKWSLYAMLNAEEMGINSKNVDQMTAKPTTPDMAHFLGAE--GDFGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNY E FDRN+G S LKI RG NALW++GG+ YAPP+R Sbjct: 299 VKQVGNYQESFDRNVGKDSALKIARGQNALWNQGGIQYAPPVR 341 >gi|330969254|gb|EGH69320.1| extracellular solute-binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 342 Score = 364 bits (935), Expect = 9e-99, Method: Composition-based stats. Identities = 161/342 (47%), Positives = 226/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + L IKK+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD EW++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGQDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|330950965|gb|EGH51225.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae Cit 7] Length = 342 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 160/342 (46%), Positives = 227/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I+K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFIQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD +W++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|126668363|ref|ZP_01739321.1| Lysine-arginine-ornithine-binding periplasmic protein [Marinobacter sp. ELB17] gi|126627179|gb|EAZ97818.1| Lysine-arginine-ornithine-binding periplasmic protein [Marinobacter sp. ELB17] Length = 340 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 170/343 (49%), Positives = 237/343 (69%), Gaps = 4/343 (1%) Query: 1 MYKDFFVSILCLIILF-FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + + + S A+ L D+K RG ++CG+ +GL GF++ NG+W G Sbjct: 1 MKKQLLLVAIATTLGGTLMAGSVQAATLDDVKSRGHVQCGVTSGLPGFSQPDENGNWTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA+++A+F K+Q+ PL AKERF ALQS +IDILSRNT WTL R+ SLGL F Sbjct: 61 DVDTCRAVAAAVFGSADKVQFTPLTAKERFTALQSGEIDILSRNTTWTLTRDASLGLNFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y+DGQGF++ K G+ + QL GA+IC+QAGTTTEL LADYF+ MK++P+VF+ Sbjct: 121 GTNYYDGQGFLVSKSLGVDNAEQLDGATICIQAGTTTELNLADYFRTKGMKFNPLVFDTS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ + + A RCD T D S L AL+ + PS VILP+IISK PL P + QGD +W+N Sbjct: 181 EQTVSGFAAGRCDVLTSDRSQLAALRSKLEDPSSAVILPNIISKEPLGPVVRQGDDQWFN 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT + + AEELG+TQ N++ + K +TNP++QR LG + ++GE LG+ D+ +RI Sbjct: 241 IVKWTLFVQINAEELGVTQANVSDM-KSSTNPEIQRLLGT--TGDMGEKLGVPADFGFRI 297 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNYGEM++RN+G + L + RG NALW+ GG+MYAPP+R Sbjct: 298 IQTVGNYGEMYERNVGPDTPLGLDRGLNALWNNGGIMYAPPVR 340 >gi|319784340|ref|YP_004143816.1| cationic amino acid ABC transporter periplasmic binding protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170228|gb|ADV13766.1| cationic amino acid ABC transporter, periplasmic binding protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 342 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 183/342 (53%), Positives = 261/342 (76%), Gaps = 3/342 (0%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + IL L + + +A+ L +K +GF++CG++TGL GF+ GDW+G D D Sbjct: 2 KHIAIGILGAATLGLMASAASAATLDTVKAKGFIQCGVSTGLAGFSAPDDKGDWQGIDAD 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 FCRA+++A+F D S++++ PL+AKERF ALQS +IDILSRNT WT+ R+ +LGL F +T Sbjct: 62 FCRAVAAAVFGDGSRVKFTPLSAKERFTALQSGEIDILSRNTTWTINRDTALGLNFIGVT 121 Query: 123 YFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G++S QLSGA++CVQ+GTTTEL LADYFKA+ M+Y+P+VFE++E Sbjct: 122 YYDGQGFMINAKKLPGVNSALQLSGAAVCVQSGTTTELNLADYFKANKMEYNPVVFEKLE 181 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++AAY A RCD YT D S LY ++LT P++HV+LP+IISK PL PA+ QGD +WY+I Sbjct: 182 EVNAAYDAGRCDVYTTDQSGLYGIRLTLGSPADHVVLPEIISKEPLGPAVRQGDDQWYHI 241 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT++A++ AEELGIT+ N++++ K++ +P+++R LG + + IG LG++ DW I+ Sbjct: 242 VKWTYFALLQAEELGITKANVDEM-KNSASPEIKRVLGQEADTKIGTDLGVSNDWVVNIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGEMF+RN+G+ S LKI RG NALW+KGGL YAPPIR Sbjct: 301 KAVGNYGEMFERNVGSGSPLKIARGINALWTKGGLQYAPPIR 342 >gi|289678218|ref|ZP_06499108.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae FF5] gi|330975706|gb|EGH75772.1| extracellular solute-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 342 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 161/342 (47%), Positives = 227/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + L IKK+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G++S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD EW++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGQDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|66044325|ref|YP_234166.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae B728a] gi|63255032|gb|AAY36128.1| extracellular solute-binding protein, family 3 [Pseudomonas syringae pv. syringae B728a] Length = 342 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 161/342 (47%), Positives = 226/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + L IKK+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD EW++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGKDLKLEKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|85716216|ref|ZP_01047190.1| extracellular solute-binding protein, family 3 [Nitrobacter sp. Nb-311A] gi|85696888|gb|EAQ34772.1| extracellular solute-binding protein, family 3 [Nitrobacter sp. Nb-311A] Length = 344 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 167/323 (51%), Positives = 232/323 (71%), Gaps = 3/323 (0%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + + L +K+RG L CG+ GL GF+ G+W G DVD CRA+++ +F+DPSK++ Sbjct: 25 SAKAKTTLDVVKERGVLSCGVTQGLPGFSTPDDKGNWTGLDVDICRAIAAVVFNDPSKVK 84 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++PL+AK+RF+ALQ +ID+LSR+T WTL R+ SLG F +TY+DGQGF++ K ++S Sbjct: 85 FVPLSAKDRFIALQWGEIDVLSRDTSWTLSRDTSLGGNFTGVTYYDGQGFLVRKSLKVNS 144 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 +L+ AS+CVQ GTT+E LADYFK++ MKY I F +E AY + RCD +T DIS Sbjct: 145 ALELNSASVCVQTGTTSEQNLADYFKSNKMKYEVIAFGTADETLKAYESGRCDVFTSDIS 204 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 LYA +L P++H +LP++ISK PL P + QGD +W++IV WT +AM+ AEELGITQK Sbjct: 205 QLYAQRLKLLNPADHAVLPEVISKEPLGPMVRQGDDQWFDIVKWTLFAMINAEELGITQK 264 Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319 N+++ +K + NP+++R LG D N GE LG+TKDW RII+ +GNYGE FDRN+G S Sbjct: 265 NVDEKAK-SENPEIKRVLGTD--GNFGEQLGVTKDWVSRIIKAVGNYGEAFDRNVGAGSP 321 Query: 320 LKIPRGYNALWSKGGLMYAPPIR 342 L I RG N LW++GG+ YAPPIR Sbjct: 322 LGITRGLNRLWNQGGIQYAPPIR 344 >gi|320327255|gb|EFW83269.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330882636|gb|EGH16785.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 342 Score = 364 bits (933), Expect = 1e-98, Method: Composition-based stats. Identities = 160/342 (46%), Positives = 228/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I+K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD +W++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG+ + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGDGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|257487410|ref|ZP_05641451.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289628605|ref|ZP_06461559.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647200|ref|ZP_06478543.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298485800|ref|ZP_07003879.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|302188404|ref|ZP_07265077.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. syringae 642] gi|298159826|gb|EFI00868.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330867828|gb|EGH02537.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330887729|gb|EGH20390.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. mori str. 301020] gi|330988313|gb|EGH86416.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008998|gb|EGH89054.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 342 Score = 364 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 160/342 (46%), Positives = 227/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I+K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD +W++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|309785598|ref|ZP_07680229.1| general L-amino acid-binding periplasmic protein aapJ [Shigella dysenteriae 1617] gi|308926718|gb|EFP72194.1| general L-amino acid-binding periplasmic protein aapJ [Shigella dysenteriae 1617] Length = 341 Score = 364 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 231/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A L ++K+GF++CGI+ GL F+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAIANQAHAGATLDAVQKKGFVQCGISDGLPRFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDNTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|71735932|ref|YP_273398.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556485|gb|AAZ35696.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 342 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 160/342 (46%), Positives = 228/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I+K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVTGVANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD +W++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG+ + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGDGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|75675721|ref|YP_318142.1| extracellular solute-binding protein [Nitrobacter winogradskyi Nb-255] gi|74420591|gb|ABA04790.1| amino acid ABC transporter substrate-binding protein, PAAT family [Nitrobacter winogradskyi Nb-255] Length = 346 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 165/348 (47%), Positives = 238/348 (68%), Gaps = 11/348 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVKANG 54 K F +I ++ ++ + L +K RG L CG++ GL GF+ G Sbjct: 2 KCVFTAIFAIVAGISLQPASAQEQESAKAKTTLEAVKARGALSCGVSQGLPGFSAPDDKG 61 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 +W G DVD CRA+++ +F+DP+K++++PL+AK+RF+ALQS +ID+LSR+T WTL R+ SL Sbjct: 62 NWTGLDVDICRAIAAVVFNDPTKVKFVPLSAKDRFIALQSGEIDVLSRDTTWTLSRDTSL 121 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 G F +TY+DGQGF++ K ++S +L+ AS+CVQ GTT E LADYFK++ MKY I Sbjct: 122 GANFTGVTYYDGQGFLIRKSLKVNSALELNSASVCVQTGTTNEQNLADYFKSNKMKYEVI 181 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F +E AY + RCD +T DIS LYA +L P++H +LP++ISK P A + GD Sbjct: 182 AFSTADETIKAYESGRCDVFTSDISQLYAQRLKLINPADHAVLPEVISKEPHATMVRHGD 241 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294 +W+++V WT +AM+ AEELGIT+KN++++++ + NP+++R G D N GE LG+TKD Sbjct: 242 DQWFDLVKWTLFAMINAEELGITKKNVDEMAR-SENPELKRIFGTD--GNFGEQLGVTKD 298 Query: 295 WTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 W RII+ +GNYGE FDRN+G S L I RG N LW++GG+MYAPPIR Sbjct: 299 WVSRIIKAVGNYGESFDRNVGAGSPLGIARGLNKLWNQGGIMYAPPIR 346 >gi|330963203|gb|EGH63463.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 342 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 163/342 (47%), Positives = 228/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAIVTALTAFGVTGAANAGTTLDAIVKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ ++GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDSAMGLMFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++KK G++S +L GA+IC+QAGTTTEL ++DYF+++N+KY PI F+ + Sbjct: 123 VTYYDGIGFLVNKKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNNLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++V+LP++ISK PL P + + D EW+ I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYVVLPEVISKEPLGPVVRKNDPEWFAI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAKITSKNVEAEAKATKNPDVARMLGAD--GTYGKDLNLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|83592340|ref|YP_426092.1| lysine-arginine-ornithine-binding periplasmic protein [Rhodospirillum rubrum ATCC 11170] gi|83575254|gb|ABC21805.1| Lysine-arginine-ornithine-binding periplasmic protein [Rhodospirillum rubrum ATCC 11170] Length = 340 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 169/343 (49%), Positives = 229/343 (66%), Gaps = 4/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K S S AS L +K RG + CG+N GL GFA G W G Sbjct: 1 MKKMIAALAAFGAAGVIASGSAMAASTLDTVKSRGEVTCGVNNGLPGFALPDDKGHWTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA+++A+F D K++++PLNAKERF ALQS +ID+LSRNT WT R+ SLGL F Sbjct: 61 DVDICRAVAAAVFGDAKKVKFVPLNAKERFTALQSGEIDVLSRNTTWTQTRDASLGLIFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DGQGF++ K+ G+SS +L+GASIC+Q+GTTTEL LADYF+A+ M Y P+VF+ Sbjct: 121 GVNYYDGQGFMVKKELGVSSAKELNGASICIQSGTTTELNLADYFRANAMTYSPVVFDTS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ + RCD T D S LYAL++ + P ++LP++ISK PL P + QGD +W N Sbjct: 181 DQTVQGFAGGRCDVLTSDQSQLYALRIKLEDPKSAIVLPEVISKEPLGPMVRQGDDQWLN 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ +A + AEELG+T N ++V T + +V+R LG + +G+ LGL DW Y I Sbjct: 241 IVRWSLFAQLNAEELGVTSANADEVKAGT-DQNVKRLLGTE--GEMGKQLGLGNDWAYAI 297 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGEMF+RN+G S L+I RG NALW+KGG+ YAPPIR Sbjct: 298 VKQVGNYGEMFERNIGKGSPLEIERGLNALWNKGGIQYAPPIR 340 >gi|90419549|ref|ZP_01227459.1| lysine-arginine-ornithine-binding periplasmic protein [Aurantimonas manganoxydans SI85-9A1] gi|90336486|gb|EAS50227.1| lysine-arginine-ornithine-binding periplasmic protein [Aurantimonas manganoxydans SI85-9A1] Length = 334 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 170/337 (50%), Positives = 244/337 (72%), Gaps = 3/337 (0%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++L L + +A L +K RG L+CG+NTGL GFA G W+G D+D+C+ Sbjct: 1 MTAVLGLTVAGVAVSGASAQTLQTVKDRGVLRCGVNTGLPGFASQNDQGAWQGLDIDYCK 60 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A+++A+F DPSK++Y PL+A +RF ALQ+ ++D+L+RNT WT+ R+ +LGL F + Y+D Sbjct: 61 AIAAAVFGDPSKVEYSPLSAVQRFPALQNNEVDVLARNTTWTMDRDTTLGLTFAGVNYYD 120 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 GQGF++ K G++S +LSGA++CVQ+GTTTEL LADYF+ +NM+Y+P+V E ++++A Sbjct: 121 GQGFMVKKDLGVNSALELSGATVCVQSGTTTELNLADYFRTNNMEYNPVVIESQSDVNSA 180 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 Y + RCD T D S L A +L EH ILP+IISK PL PA+ QGDTEW+N+V WTH Sbjct: 181 YDSGRCDVLTTDASGLAASRLEMGNADEHTILPEIISKEPLGPAVRQGDTEWFNVVKWTH 240 Query: 246 YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305 A++ AEELG+TQ+N+ + K + NP+++R LG DK N GE++GL++DW II+ +GN Sbjct: 241 NALLNAEELGVTQENVEDM-KTSENPEIRRLLGEDK--NFGESIGLSQDWAVNIIKAVGN 297 Query: 306 YGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 YGE+F+RN+G + L+I RG NALW+KGGL Y PIR Sbjct: 298 YGEIFERNIGVDTPLEIARGQNALWTKGGLQYGMPIR 334 >gi|28868466|ref|NP_791085.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213967086|ref|ZP_03395235.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|301386368|ref|ZP_07234786.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302060650|ref|ZP_07252191.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato K40] gi|302133060|ref|ZP_07259050.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851704|gb|AAO54780.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213927928|gb|EEB61474.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|331015252|gb|EGH95308.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 342 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 163/342 (47%), Positives = 228/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAIVTALAAFGVTGAANAGATLDAIVKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ ++GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDSAMGLMFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++KK G++S +L GA+IC+QAGTTTEL ++DYF+++N+KY PI F+ + Sbjct: 123 VTYYDGIGFLVNKKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNNLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++V+LP++ISK PL P + + D EW+ I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYVVLPEVISKEPLGPVVRKNDPEWFAI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAKITSKNVEAEAKATKNPDVARMLGAD--GTYGKDLNLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|330808961|ref|YP_004353423.1| putative amino acid ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377069|gb|AEA68419.1| putative amino acid ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 346 Score = 362 bits (930), Expect = 3e-98, Method: Composition-based stats. Identities = 163/348 (46%), Positives = 230/348 (66%), Gaps = 8/348 (2%) Query: 1 MY--KDFFVSILCLIILFFTS----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K S + L S + + L ++KK+GF++CGI+ GL GF+ A G Sbjct: 1 MKQEKKLLKSASTVACLTLGSVFAITAHAGATLDNVKKKGFVQCGISDGLPGFSYADAKG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 ++ GFDVD CRA+++A+F D K++Y L AKERF ALQS ++D+LSR+T WT R+ ++ Sbjct: 61 EFHGFDVDVCRAVAAAVFGDAKKVKYTQLTAKERFTALQSGEVDMLSRSTTWTSSRDGAM 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 G+ F + Y+DGQGF+++KK G+ S +L GA+ C+QAGT TEL L+DYF+++ MKY PI Sbjct: 121 GIQFTNVAYYDGQGFLVNKKLGVKSARELDGATFCIQAGTVTELNLSDYFRSNGMKYTPI 180 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F+ +E A + RCD T D S LY +L P + +LPD+ISK PL PA+ +GD Sbjct: 181 TFDTSDESFKALESGRCDVLTTDQSQLYGQRLKLATPDDFAVLPDVISKEPLTPAVRRGD 240 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294 +W+ +V W+ AM+ AEELGIT KN+ + K + NPD+ R LG + +G+ L L D Sbjct: 241 EDWFTVVRWSLAAMLNAEELGITSKNVADMVKSSKNPDIARLLGTE--GALGKDLNLPND 298 Query: 295 WTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 W +II +GNYGE F+RNLG S++KI RG NALWS+GGL YAPP+R Sbjct: 299 WAAKIIAQVGNYGESFERNLGTGSDMKIKRGLNALWSQGGLQYAPPVR 346 >gi|330873115|gb|EGH07264.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 342 Score = 362 bits (930), Expect = 3e-98, Method: Composition-based stats. Identities = 163/342 (47%), Positives = 228/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAIVTALTAFGVTGAANAGATLDAIVKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ ++GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDSAMGLMFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++KK G++S +L GA+IC+QAGTTTEL ++DYF+++N+KY PI F+ + Sbjct: 123 VTYYDGIGFLVNKKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNNLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++V+LP++ISK PL P + + D EW+ I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYVVLPEVISKEPLGPVVRKNDPEWFAI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAKITSKNVEAEAKATKNPDVARMLGAD--GTYGKDLNLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|311695087|gb|ADP97960.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [marine bacterium HP15] Length = 347 Score = 362 bits (930), Expect = 3e-98, Method: Composition-based stats. Identities = 163/340 (47%), Positives = 232/340 (68%), Gaps = 3/340 (0%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + I + F + + A+ L ++K++G L+CG+ +GL GF++ G+W G DVD Sbjct: 11 KSIALGIALAVGTFSATGAMAATTLENVKEKGHLQCGVTSGLPGFSQPDEKGNWTGIDVD 70 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 CRA+++AIF D + +++ PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F + Sbjct: 71 TCRAVAAAIFGDANAVEFTPLTAKERFTALQSGEIDMLSRNTTWTLTRDASLGLNFAGVN 130 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQGF+++K G+ +QL GA+IC+QAGTTTEL L+DYF+A M++ PIVF+ E+ Sbjct: 131 YYDGQGFLINKGIGVDDATQLDGATICIQAGTTTELNLSDYFRAKGMEFKPIVFDTSEQT 190 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + A RCD T D S L AL+ PS ILP+ ISK PL P + QGD +W+NIV Sbjct: 191 VQGFAAGRCDVLTSDRSQLAALRSKLSDPSSAKILPNTISKEPLGPVVRQGDDQWFNIVK 250 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 W +A + AEELG+T N + + K + NP++QR LG D ++G LGL D+ Y+ ++ Sbjct: 251 WVLFAQINAEELGVTSANADDMLK-SDNPNIQRLLGTD--GDMGAKLGLPDDFGYQAVKL 307 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEM+DRN+G + L + RG NALW++GG+MYAPP+R Sbjct: 308 VGNYGEMYDRNVGPDTPLGLDRGINALWTEGGIMYAPPVR 347 >gi|320325827|gb|EFW81888.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. B076] Length = 342 Score = 362 bits (930), Expect = 3e-98, Method: Composition-based stats. Identities = 160/342 (46%), Positives = 228/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I+K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD +W++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKLTKNPDVARMLGAD--GTYGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG+ + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGDGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|330962155|gb|EGH62415.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 342 Score = 362 bits (929), Expect = 4e-98, Method: Composition-based stats. Identities = 161/342 (47%), Positives = 227/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L T + + L I+K+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD EW++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKATKNPDVARMLGAD--GTYGKDLKLPKDWVVKIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342 >gi|330999032|ref|ZP_08322757.1| general L-amino acid-binding periplasmic protein AapJ [Parasutterella excrementihominis YIT 11859] gi|329575774|gb|EGG57300.1| general L-amino acid-binding periplasmic protein AapJ [Parasutterella excrementihominis YIT 11859] Length = 340 Score = 362 bits (929), Expect = 4e-98, Method: Composition-based stats. Identities = 149/342 (43%), Positives = 227/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L + L + + +L +K + CG+NT GF+ + G+W G D Sbjct: 1 MNQTILAGALSAVSLSLAAPAFAGPVLDKVKANDVVVCGVNTAAPGFSNADSKGNWTGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRAL++A+ D +K++++PLN+ +RF ALQ+ ++D+L+RNT W L R+ SLG F Sbjct: 61 VDYCRALAAAVLGDANKVKFVPLNSPQRFSALQAGEVDVLARNTTWNLTRDASLGAVFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ KK + S QL+GA+ICVQ+GT++E ++ADYFK+H MKY ++F+ E Sbjct: 121 TNYYDGQGFLVPKKLNVKSAKQLNGATICVQSGTSSEPSVADYFKSHGMKYKAVLFDTTE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + RC YT D+S L + P ++VILP++ISK PL P++ +GD EW+ I Sbjct: 181 ATQGAFLSGRCQVYTTDMSDLAGARTKAANPDDYVILPEVISKEPLGPSVRRGDNEWFQI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 W A + AEE GITQ N +++ K +T+P+V+R LG ++G+ LGL KDW+YRI+ Sbjct: 241 ARWVLNAFIEAEEKGITQANADELRKTSTDPNVKRLLG--SGEDMGKLLGLDKDWSYRIV 298 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+RNLG ++ L +PRG N W+ GG++YAPP+R Sbjct: 299 KQVGNYGESFERNLGPKTPLALPRGINNQWTNGGILYAPPVR 340 >gi|220926164|ref|YP_002501466.1| family 3 extracellular solute-binding protein [Methylobacterium nodulans ORS 2060] gi|219950771|gb|ACL61163.1| extracellular solute-binding protein family 3 [Methylobacterium nodulans ORS 2060] Length = 337 Score = 362 bits (929), Expect = 4e-98, Method: Composition-based stats. Identities = 179/339 (52%), Positives = 242/339 (71%), Gaps = 3/339 (0%) Query: 5 FFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++ L L + + + + L IK++GF+ CG N GL GF A G W G DVDF Sbjct: 1 MIAALGLSLSVCLLSGAAQAQATLASIKQKGFIACGSNPGLAGFGVPDAQGRWTGLDVDF 60 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 CRAL++AIF+D ++++++PL+AK+RF ALQS ++D+LSRNT WT+ R+ SLGL F + + Sbjct: 61 CRALAAAIFNDTTRVRFIPLSAKDRFTALQSGEVDVLSRNTTWTMSRDTSLGLDFPSVNF 120 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF++ KK G++S QL GASIC Q GTTTEL LADYF+A+ +KY + F +E Sbjct: 121 YDGQGFMVKKKLGVTSAKQLDGASICTQQGTTTELNLADYFRANKLKYEAVAFATADETF 180 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 AY + RCDA+T D S LYA +L P ++V+LP++ISK PL PA+ GD++W +IV W Sbjct: 181 KAYDSGRCDAFTTDASGLYAERLRASNPDDNVVLPEVISKEPLGPAVRHGDSQWADIVRW 240 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 TH+AM+ AEE GITQ N++Q+ K T NPDV+R LG + GE +GLT DW YRII+ + Sbjct: 241 THFAMLNAEEAGITQANVDQMLKSTDNPDVKRILGTE--GKFGEGIGLTNDWAYRIIKLV 298 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F+RN+G S+LKI RG NALWSKGGL Y PPIR Sbjct: 299 GNYGEVFERNVGQGSQLKIQRGVNALWSKGGLQYGPPIR 337 >gi|312962948|ref|ZP_07777434.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] gi|311282717|gb|EFQ61312.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] Length = 342 Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats. Identities = 159/344 (46%), Positives = 230/344 (66%), Gaps = 4/344 (1%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++ +IL + + L I+K+GF++CG++ GL GF + G G Sbjct: 1 MKHLKTSLAAVSVAVILGLAGSAHAGTTLDAIQKKGFIQCGVSDGLPGFGVPDSQGKMTG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 DVD C A+++A+F D SK+++ L AKERF ALQS +ID++SRNT WT R+ +GL F Sbjct: 61 IDVDVCHAVAAAVFGDASKVKFTQLTAKERFTALQSGEIDLISRNTTWTSSRDSGMGLVF 120 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 +TY+DG GF+++ K G+++ QL+GA++C+QAGTTTEL ++DYF+ H MKY PI F+ Sbjct: 121 TGVTYYDGIGFLVNNKLGVTAAKQLNGATVCIQAGTTTELNVSDYFRTHGMKYTPITFDT 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E A RCD T D S LYA ++ P E V+LP++ISK PL P + +GD EW+ Sbjct: 181 ADESAKGLEAGRCDVLTTDQSGLYAQRIKMAHPEEFVVLPEVISKEPLGPLVRKGDDEWF 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 +IV WT +AM+ AEE+GIT +N+ + ++ + NPDV R LG D G+ L L +DW + Sbjct: 241 SIVKWTLFAMLNAEEMGITSQNVEEQARTSKNPDVARLLGAD--GEYGKDLKLRRDWVVQ 298 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I++ +GNYGE+F+RN+G S LKI RG NALW+ GG+ YAPP+R Sbjct: 299 IVKQVGNYGEVFERNIGQGSVLKIKRGLNALWNNGGIQYAPPVR 342 >gi|254780170|ref|YP_003064583.1| cationic amino acid ABC transporter, periplasmic binding protein [Candidatus Liberibacter asiaticus str. psy62] gi|254039847|gb|ACT56643.1| cationic amino acid ABC transporter, periplasmic binding protein [Candidatus Liberibacter asiaticus str. psy62] Length = 342 Score = 362 bits (928), Expect = 6e-98, Method: Composition-based stats. Identities = 342/342 (100%), Positives = 342/342 (100%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD Sbjct: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP Sbjct: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE Sbjct: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI Sbjct: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII Sbjct: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR Sbjct: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 >gi|229592512|ref|YP_002874631.1| putative ABC transporter periplasmic solute binding protein [Pseudomonas fluorescens SBW25] gi|229364378|emb|CAY52154.1| Putative ABC transport system, periplasmic solute binding protein [Pseudomonas fluorescens SBW25] Length = 342 Score = 362 bits (928), Expect = 6e-98, Method: Composition-based stats. Identities = 161/341 (47%), Positives = 227/341 (66%), Gaps = 2/341 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +K +I L S + L I+K+GF++CG++ GL GF +NG G DV Sbjct: 4 FKTTLAAIGATAALGLASTAQAGVTLDAIQKKGFIQCGVSDGLPGFGVPDSNGKMTGIDV 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D C A+++A+F D SK+++ L AKERF ALQS +ID++SRNT WT R+ +GL F + Sbjct: 64 DVCHAVAAAVFGDASKVKFTQLTAKERFTALQSGEIDMISRNTTWTSSRDSGMGLVFTGV 123 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 TY+DG GF+++ K G++ QL GA++C+QAGTTTEL ++DYF+ + MKY PI F+ +E Sbjct: 124 TYYDGIGFLVNNKLGVTGAKQLDGATVCIQAGTTTELNVSDYFRTNGMKYTPITFDTADE 183 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A RCD T D S LYA ++ P E V+LP++ISK PL P + +GD EW++IV Sbjct: 184 SAKGLEAGRCDVLTTDQSGLYAQRIKMAHPDEFVVLPEVISKEPLGPLVRKGDDEWFSIV 243 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 WT +AM+ AEE+GIT +N+ + +K T NPD+ R LG D G+ L L KDW +I++ Sbjct: 244 KWTLFAMLNAEEMGITSQNVEEQAKTTKNPDIARLLGAD--GEYGKDLKLRKDWVVQIVK 301 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F+RN+G S LKI RG NALW+ GG+ YAPP+R Sbjct: 302 QVGNYGEVFERNIGQGSVLKIKRGLNALWNNGGIQYAPPVR 342 >gi|317049795|ref|YP_004117443.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316951412|gb|ADU70887.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 341 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 164/343 (47%), Positives = 231/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF + +A L IKK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMLSTLVAAASLFAVAQQAHAGTTLDAIKKKGFVQCGISDGLPGFSYADASGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA ++A+F D SK++Y PL AKERF ALQS ++DILSRNT WT R+ +G F Sbjct: 61 DVDVCRAAAAAVFGDASKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDGGMGFLFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ HKK G+ S +L GA++C+QAGT TEL +ADYFKA+NM+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHKKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P E ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDDDWFT 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ YAM+ AEE+GI KN++Q++ +NPD+ LG + + G+ L L W + I Sbjct: 241 IVKWSLYAMLNAEEMGINSKNVDQLAAKPSNPDMAHLLGAE--GDFGKDLKLDNKWAFNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E FDRN+G S LKI RG NALW++GG+ YAPP+R Sbjct: 299 IKQVGNYQESFDRNVGKDSALKIARGQNALWNQGGIQYAPPVR 341 >gi|294852106|ref|ZP_06792779.1| general L-amino acid transport system substrate-binding protein [Brucella sp. NVSL 07-0026] gi|294820695|gb|EFG37694.1| general L-amino acid transport system substrate-binding protein [Brucella sp. NVSL 07-0026] Length = 338 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 185/339 (54%), Positives = 247/339 (72%), Gaps = 3/339 (0%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFDVD+CR Sbjct: 1 MTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFDVDYCR 60 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F I Y+D Sbjct: 61 AVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYD 120 Query: 126 GQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 GQGF++ K GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE++EE + Sbjct: 121 GQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEKIEEAN 180 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W ++V W Sbjct: 181 AAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRW 240 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 TH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW +II+ + Sbjct: 241 THNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGV 299 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F+RN+G+ S LKI RG N W+KGGL Y P+R Sbjct: 300 GNYGEIFERNIGSGSPLKIARGLNVQWNKGGLQYGIPVR 338 >gi|188532411|ref|YP_001906208.1| General L-amino ABC transporter binding protein [Erwinia tasmaniensis Et1/99] gi|188027453|emb|CAO95300.1| General L-amino ABC transporter binding protein [Erwinia tasmaniensis Et1/99] Length = 341 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 160/343 (46%), Positives = 228/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF + +A L IKK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMLSTLVSAAALFSIANQAHAGTTLDAIKKKGFVQCGISDGLPGFSYADASGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA ++A+ D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G F Sbjct: 61 DVDVCRAAAAAVLGDAGKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDGGMGFIFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H+K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P + ++LP++ISK PL P + + D +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDDFIVLPEVISKEPLGPVVRRDDNDWFT 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ YAM+ AEE+GIT KN++ +S +NPD+ LG + + G+ L L W Y I Sbjct: 241 IVKWSLYAMLNAEEMGITSKNVDSLSAKPSNPDMSHLLGAE--GDFGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+FDRN+G S+LKI RG NALW+ GG+ YAPP+R Sbjct: 299 IKQVGNYQEVFDRNVGKDSQLKIARGQNALWNNGGIQYAPPVR 341 >gi|307942366|ref|ZP_07657717.1| general L-amino acid-binding periplasmic protein AapJ [Roseibium sp. TrichSKD4] gi|307774652|gb|EFO33862.1| general L-amino acid-binding periplasmic protein AapJ [Roseibium sp. TrichSKD4] Length = 371 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 176/342 (51%), Positives = 242/342 (70%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L + + S +A+ L D+K +GF++CG++ GL GF+ + G+W G D Sbjct: 34 MSKKFLPLVLGA-AMGVAATSASAATLDDVKAKGFVQCGVSQGLPGFSNPDSQGNWTGLD 92 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++AIFDD + +++ PL+AKERF ALQS +ID+LSRNT WT+ R+ SLGL F Sbjct: 93 VDVCRAMAAAIFDDVNAVKFTPLSAKERFTALQSGEIDVLSRNTTWTMTRDTSLGLNFAG 152 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G++S +LSGAS+C GTTTEL +ADYF+A+NM Y + FE+ + Sbjct: 153 VNYYDGQGFMVRKDLGVTSALELSGASVCTNTGTTTELNVADYFRANNMPYEIVAFEKAD 212 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E+ AAY A RCD YT D S LYA +L P +H++LP+IISK PL P + QGD +W+N+ Sbjct: 213 EVVAAYDAGRCDVYTTDASGLYAQRLKLTNPGDHMVLPEIISKEPLGPVVRQGDDQWFNL 272 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT AM+ AEELG+T N++ + K + NP V+R LG + GE +GLT DW RII Sbjct: 273 VKWTLNAMINAEELGVTSANVDDM-KGSDNPSVKRLLGTE--GAYGENIGLTNDWAARII 329 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +H+GNYGE FD N+G + L I RG NALWSKGG++YAPP+R Sbjct: 330 KHVGNYGESFDANVGPDTPLGIARGVNALWSKGGVLYAPPVR 371 >gi|254512097|ref|ZP_05124164.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacteraceae bacterium KLH11] gi|221535808|gb|EEE38796.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacteraceae bacterium KLH11] Length = 346 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 153/342 (44%), Positives = 222/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + + + A + D+K RG L CG++TGLVGFA ANG W+GFD Sbjct: 9 MKKSVILGVATIA--GLAAGAAAAGTVDDVKARGKLNCGVSTGLVGFAAPDANGVWQGFD 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+LSRNT WT R+ L F Sbjct: 67 VALCRAVAAAVLGDANAVEFVPTTTKTRFTALASGEIDMLSRNTTWTYSRDADLKFEFTG 126 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+ S +L GA +C+Q GTTTEL LAD+F+++N+ Y P+ E Sbjct: 127 VNYYDGQGFMVPKALGVGSAKELDGARVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 186 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D SAL + + T + P EH++LP+IISK PL P + G+ EW ++ Sbjct: 187 EAQQQYLAGACDVYTTDASALASTRATFENPDEHILLPEIISKEPLGPLVRHGENEWGDV 246 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++TAEELG+T NI+++S + NP+V R LG + N+GE +GL DW R I Sbjct: 247 VRWTLNALITAEELGVTSANIDEMSAGSNNPEVDRLLGTE--GNLGEMMGLDADWAARAI 304 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + GNYGE+F +N+G ++ + + RG NA W++GGL+Y+PP R Sbjct: 305 KAGGNYGELFAKNIGEETPIGLARGLNAQWTEGGLLYSPPFR 346 >gi|170743936|ref|YP_001772591.1| cationic amino acid ABC transporter periplasmic binding protein [Methylobacterium sp. 4-46] gi|168198210|gb|ACA20157.1| cationic amino acid ABC transporter, periplasmic binding protein [Methylobacterium sp. 4-46] Length = 340 Score = 360 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 177/342 (51%), Positives = 239/342 (69%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L + + + L IK++GF+ CG N GL GF A G W G D Sbjct: 1 MKRIIAALALTASVCLTAGAAQAQATLASIKQKGFIACGSNPGLAGFGVPDAQGRWTGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFCRAL++A+F+D +K++++PL+AK+RF ALQS ++D+LSRNT WT+ R+ +LGL F Sbjct: 61 VDFCRALAAAVFNDTTKVRFIPLSAKDRFTALQSGEVDVLSRNTTWTMSRDTALGLDFPA 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++DGQGF++ KK G++S QL GASIC Q GTTTEL LADYF+A+ +KY + F + Sbjct: 121 VNFYDGQGFMVKKKLGVTSAKQLDGASICTQQGTTTELNLADYFRANKLKYEVVAFATSD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AY + RCDA+T D S LYA +L P ++++LP++ISK PL PA+ GD++W +I Sbjct: 181 ETFKAYDSGRCDAFTTDASGLYAERLRAANPDDNIVLPEVISKEPLGPAVRHGDSQWADI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WTHYAM+ AEE GITQ N++Q+ K T NPDV+R LG + GE +GL+ DW YRII Sbjct: 241 VRWTHYAMLNAEEAGITQANVDQMVKATDNPDVKRILGTE--GKFGEGIGLSNDWAYRII 298 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F+RN+G S LKI RG NALWSKGGL Y PPIR Sbjct: 299 KLVGNYGEVFERNVGQGSPLKIQRGVNALWSKGGLQYGPPIR 340 >gi|56695433|ref|YP_165781.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3] gi|56677170|gb|AAV93836.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3] Length = 380 Score = 359 bits (921), Expect = 3e-97, Method: Composition-based stats. Identities = 155/342 (45%), Positives = 221/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + + A + D+K RG L CG+ TGLVGFA +NG+WKGFD Sbjct: 43 MKKSVFLG--ALTVAGMAAGVAAAGTMDDVKARGKLNCGVTTGLVGFAAPDSNGEWKGFD 100 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S ++D+L+RNT WT R++ L F Sbjct: 101 VALCRAVAAAVLGDGNAVEFVPTTGKTRFTALASGEVDMLARNTTWTFSRDVDLKFEFVG 160 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+SS +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+ E Sbjct: 161 VNYYDGQGFMVPKSLGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 220 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T + P +HV+LP+IISK PL P + GD EW ++ Sbjct: 221 EAQQQYLAGACDVYTTDASGLAATRATFENPGDHVLLPEIISKEPLGPLVRHGDHEWGDV 280 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A+V+AEE+GIT NI+++S T NP++ R LG + +GE LGL +W R I Sbjct: 281 VRWTLNALVSAEEMGITSANIDEMSAGTNNPEINRILGSE--GTLGEMLGLDAEWAKRAI 338 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + GNYGE+F +N+G + + + RG NA W+ GGL+Y+PP R Sbjct: 339 KVGGNYGEVFAQNIGESTPIGLARGLNAQWTDGGLLYSPPFR 380 >gi|306841324|ref|ZP_07474033.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella sp. BO2] gi|306288627|gb|EFM59963.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella sp. BO2] Length = 339 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 167/342 (48%), Positives = 228/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSVQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + + D+ PDV+RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-EADLDSRKPDVRRFLGSE--GDNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|259906955|ref|YP_002647311.1| General L-amino ABC transporter binding protein [Erwinia pyrifoliae Ep1/96] gi|224962577|emb|CAX54032.1| General L-amino ABC transporter binding protein [Erwinia pyrifoliae Ep1/96] gi|283476749|emb|CAY72585.1| putative ABC transport system, periplasmic component [Erwinia pyrifoliae DSM 12163] gi|310766170|gb|ADP11120.1| General L-amino ABC transporter binding protein [Erwinia sp. Ejp617] Length = 341 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 159/343 (46%), Positives = 228/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF + +A L IKK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMLSTLVTAAALFTLANQAHAGTTLDAIKKKGFIQCGISDGLPGFSYADASGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA ++A+ D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G F Sbjct: 61 DVDVCRAAAAAVLGDAGKVKYTPLTAKERFTALQSGEVDILSRNTTWTSARDGGMGFIFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H+K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P + ++LP++ISK PL P + + D +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDDFIVLPEVISKEPLGPVVRRDDDDWFT 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ +AM+ AEE+GIT KN++ +S +NPD+ LG + + G+ L L W Y I Sbjct: 241 IVKWSLFAMLNAEEMGITSKNVDSMSAKPSNPDMAHLLGAE--GDFGKDLKLGNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+FDRN+G S+LKI RG NALW+ GG+ YAPP+R Sbjct: 299 IKQVGNYQEVFDRNVGKDSQLKIARGQNALWNNGGIQYAPPVR 341 >gi|322834718|ref|YP_004214745.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] gi|321169919|gb|ADW75618.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] Length = 341 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 229/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ + +A L +KK+GF++CGI+ GL GF+ + G + G Sbjct: 1 MKKILLSTLIAAASFVTLAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADSKGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA+++A+F D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G+ F Sbjct: 61 DVDVCRAVAAAVFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMIFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H+K G+ S +L GA++C+QAGT TEL +ADYFKA+ M Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCLQAGTDTELNVADYFKANKMTYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P E ++LP++ISK PL P + +GD +W Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWLA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ +AM+ AEE+G+T +N+++++ + T PD+ LG K+ G L + DW +I Sbjct: 241 IVRWSLFAMLNAEEMGVTSQNVDKLAANPTTPDMSNLLG--KTGTYGADLKVPNDWVVKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE F+RN+G SELKI RG NALW+KGG+ YAPP+R Sbjct: 299 VKQVGNYGESFERNVGQGSELKIKRGQNALWNKGGIQYAPPVR 341 >gi|254712708|ref|ZP_05174519.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella ceti M644/93/1] gi|254715778|ref|ZP_05177589.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella ceti M13/05/1] gi|261217539|ref|ZP_05931820.1| extracellular solute-binding protein family 3 [Brucella ceti M13/05/1] gi|261320414|ref|ZP_05959611.1| extracellular solute-binding protein family 3 [Brucella ceti M644/93/1] gi|260922628|gb|EEX89196.1| extracellular solute-binding protein family 3 [Brucella ceti M13/05/1] gi|261293104|gb|EEX96600.1| extracellular solute-binding protein family 3 [Brucella ceti M644/93/1] Length = 339 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 165/342 (48%), Positives = 226/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SA YA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASAFYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|90578887|ref|ZP_01234697.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio angustum S14] gi|90439720|gb|EAS64901.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio angustum S14] Length = 342 Score = 359 bits (920), Expect = 5e-97, Method: Composition-based stats. Identities = 160/341 (46%), Positives = 231/341 (67%), Gaps = 2/341 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + L F + + + L + K+G+++CG++ GL GF+ A G W+G DV Sbjct: 4 KLSVVFAALASSTALFAANANAEATLDKVMKQGYVQCGVSAGLPGFSNPNAKGQWEGLDV 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 +FC+A+++A D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F + Sbjct: 64 EFCQAIAAATIGDKSKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLNFTGV 123 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y+DGQGF++ K GI S +L GA++CVQ+GTTTEL LADYF+ + M Y P+VF+ + Sbjct: 124 NYYDGQGFMVKKDMGIKSAKELDGAAVCVQSGTTTELNLADYFRVNGMTYKPVVFDTAPQ 183 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + + RCD T D S LYAL+L P+ V+LP+IISK PL P + QGD +W+N+V Sbjct: 184 TSKGFDSGRCDVLTTDQSGLYALRLNLKDPNSAVVLPEIISKEPLGPVVRQGDDQWFNVV 243 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 WT + M+ AEE +T N+++++K++ +P+++R +G+D G+ LGL DW Y+II+ Sbjct: 244 RWTLFTMINAEEFNVTSANVDKLAKESKDPNIRRLIGLD--GPKGKGLGLKDDWGYQIIK 301 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F+R +G S LKI RG NALW+ GG+ YAPPIR Sbjct: 302 QVGNYGESFERTVGEGSPLKIKRGLNALWTNGGIQYAPPIR 342 >gi|89073072|ref|ZP_01159619.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium sp. SKA34] gi|89051290|gb|EAR56746.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium sp. SKA34] Length = 342 Score = 359 bits (920), Expect = 5e-97, Method: Composition-based stats. Identities = 161/341 (47%), Positives = 232/341 (68%), Gaps = 2/341 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + L F + + + L + K+G+++CG++ GL GF+ A G W+G DV Sbjct: 4 KLSVVFAALASSTALFAANANAEATLDKVMKQGYVQCGVSAGLPGFSNPNAKGQWEGLDV 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 +FC+A+++A D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F + Sbjct: 64 EFCQAIAAATIGDKSKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLNFTGV 123 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y+DGQGF++ K GI+S +L GA++CVQ+GTTTEL LADYF+ + M Y P+VF+ + Sbjct: 124 NYYDGQGFMVKKDMGITSAKELDGAAVCVQSGTTTELNLADYFRVNGMTYKPVVFDTAPQ 183 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + + RCD T D S LYAL+L PS V+LP+IISK PL P + QGD +W+N+V Sbjct: 184 TSKGFDSGRCDVLTTDQSGLYALRLNLKDPSSAVVLPEIISKEPLGPVVRQGDDQWFNVV 243 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 WT + M+ AEE +T N+++++K++ +P+++R +G+D G+ LGL DW Y+II+ Sbjct: 244 RWTLFTMINAEEFNVTSANVDKLAKESKDPNIRRLIGLD--GPKGKGLGLKDDWGYQIIK 301 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F+R +G S LKI RG NALW+ GG+ YAPPIR Sbjct: 302 QVGNYGESFERTVGEGSPLKIKRGLNALWTNGGIQYAPPIR 342 >gi|148557994|ref|YP_001257868.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella ovis ATCC 25840] gi|225629405|ref|ZP_03787438.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella ceti str. Cudo] gi|225686709|ref|YP_002734681.1| amino-acid ABC transporter-binding protein yhdW [Brucella melitensis ATCC 23457] gi|254705588|ref|ZP_05167416.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella pinnipedialis M163/99/10] gi|254710821|ref|ZP_05172632.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella pinnipedialis B2/94] gi|256015709|ref|YP_003105718.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella microti CCM 4915] gi|256043818|ref|ZP_05446739.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella melitensis bv. 1 str. Rev.1] gi|256058889|ref|ZP_05449103.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella neotomae 5K33] gi|256157396|ref|ZP_05455314.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella ceti M490/95/1] gi|256253625|ref|ZP_05459161.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella ceti B1/94] gi|256262158|ref|ZP_05464690.1| solute-binding protein/glutamate receptor [Brucella melitensis bv. 2 str. 63/9] gi|260167705|ref|ZP_05754516.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. F5/99] gi|260564999|ref|ZP_05835484.1| solute-binding protein/glutamate receptor [Brucella melitensis bv. 1 str. 16M] gi|261220761|ref|ZP_05935042.1| extracellular solute-binding protein [Brucella ceti B1/94] gi|261312993|ref|ZP_05952190.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis M163/99/10] gi|261318389|ref|ZP_05957586.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis B2/94] gi|261322825|ref|ZP_05962022.1| extracellular solute-binding protein [Brucella neotomae 5K33] gi|261757141|ref|ZP_06000850.1| solute-binding protein/glutamate receptor [Brucella sp. F5/99] gi|265990242|ref|ZP_06102799.1| extracellular solute-binding protein family 3 [Brucella melitensis bv. 1 str. Rev.1] gi|265995884|ref|ZP_06108441.1| extracellular solute-binding protein [Brucella ceti M490/95/1] gi|294853902|ref|ZP_06794574.1| general L-amino acid transport system substrate-binding protein [Brucella sp. NVSL 07-0026] gi|148369279|gb|ABQ62151.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella ovis ATCC 25840] gi|225615901|gb|EEH12950.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella ceti str. Cudo] gi|225642814|gb|ACO02727.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella melitensis ATCC 23457] gi|255998369|gb|ACU50056.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella microti CCM 4915] gi|260152642|gb|EEW87735.1| solute-binding protein/glutamate receptor [Brucella melitensis bv. 1 str. 16M] gi|260919345|gb|EEX85998.1| extracellular solute-binding protein [Brucella ceti B1/94] gi|261297612|gb|EEY01109.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis B2/94] gi|261298805|gb|EEY02302.1| extracellular solute-binding protein [Brucella neotomae 5K33] gi|261302019|gb|EEY05516.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis M163/99/10] gi|261737125|gb|EEY25121.1| solute-binding protein/glutamate receptor [Brucella sp. F5/99] gi|262550181|gb|EEZ06342.1| extracellular solute-binding protein [Brucella ceti M490/95/1] gi|263000911|gb|EEZ13601.1| extracellular solute-binding protein family 3 [Brucella melitensis bv. 1 str. Rev.1] gi|263091858|gb|EEZ16180.1| solute-binding protein/glutamate receptor [Brucella melitensis bv. 2 str. 63/9] gi|294819557|gb|EFG36557.1| general L-amino acid transport system substrate-binding protein [Brucella sp. NVSL 07-0026] gi|326411105|gb|ADZ68169.1| amino-acid ABC transporter-binding protein yhdW [Brucella melitensis M28] gi|326554396|gb|ADZ89035.1| amino-acid ABC transporter-binding protein yhdW [Brucella melitensis M5-90] Length = 339 Score = 359 bits (920), Expect = 5e-97, Method: Composition-based stats. Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|192291210|ref|YP_001991815.1| extracellular solute-binding protein family 3 [Rhodopseudomonas palustris TIE-1] gi|192284959|gb|ACF01340.1| extracellular solute-binding protein family 3 [Rhodopseudomonas palustris TIE-1] Length = 353 Score = 359 bits (920), Expect = 6e-97, Method: Composition-based stats. Identities = 169/356 (47%), Positives = 241/356 (67%), Gaps = 17/356 (4%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNAS-------------ILGDIKKRGFLKCGINTGLVG 46 M + V++ + L L +++ G L CG++ GL G Sbjct: 1 MKRVSILVALAIAVGLSPQVAGAQNPKAGSTAGAEKKKTTLEIVRENGALSCGVSQGLPG 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F+ G+W G DVD CRA+++A+FDDPSK++++PL+AK+RF ALQS +ID+LSRNT W Sbjct: 61 FSAPDDKGNWAGLDVDVCRAIAAAVFDDPSKVKFVPLSAKDRFTALQSGEIDVLSRNTTW 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 TL R+ SLG++F ++Y+DGQGF+ K ++S +L+GASICVQ GTT E +ADYFK Sbjct: 121 TLSRDTSLGVSFAGVSYYDGQGFMAKKSLKVNSALELNGASICVQTGTTNEQNVADYFKG 180 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 +NMKY I F +E AY + RCD +T D+S LYA +L P++H +LP++ISK PL Sbjct: 181 NNMKYEVIAFANADEAVKAYESGRCDVFTSDVSQLYAQRLKLATPADHAVLPEVISKEPL 240 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIG 286 P + GD +W++IV WT +A+V AEELG+TQKN+++++K + P+++R G D N+G Sbjct: 241 GPLVRHGDDQWFDIVKWTLFALVNAEELGVTQKNVDEMAK-SDKPELKRVFGTD--GNLG 297 Query: 287 EALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 E LGLTKDW RI++ GNYGE F+RN+G+ S+L+I RG N LW+KGG+MYAPPIR Sbjct: 298 EQLGLTKDWVARIVKATGNYGESFERNVGSGSKLEIARGLNKLWNKGGIMYAPPIR 353 >gi|296272121|ref|YP_003654752.1| cationic amino acid ABC transporter periplasmic binding protein [Arcobacter nitrofigilis DSM 7299] gi|296096296|gb|ADG92246.1| cationic amino acid ABC transporter, periplasmic binding protein [Arcobacter nitrofigilis DSM 7299] Length = 338 Score = 358 bits (919), Expect = 6e-97, Method: Composition-based stats. Identities = 173/340 (50%), Positives = 228/340 (67%), Gaps = 3/340 (0%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L S ++A L K G L CG+NTGL GFA ++G WKG DVD Sbjct: 2 KLLKTLSLSIAALAIASTVSSADTLDTTIKNGKLSCGLNTGLPGFAAPDSDGVWKGIDVD 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 CRA+++A+ D +K++Y LNAKERF ALQS +ID+L+RNT WT R+ SLGL F + Sbjct: 62 VCRAVAAAVLGDATKVKYAHLNAKERFTALQSGEIDVLARNTTWTATRDTSLGLNFTGVN 121 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQGF++ KK G+ S +L GA+ C+QAGTTTEL L DYFK+HNMKY PI ++ + Sbjct: 122 YYDGQGFLVSKKLGVKSAKELDGATFCIQAGTTTELNLTDYFKSHNMKYTPITYDTSAQT 181 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + RCDA T D S LYAL+ PS ++LP+IISK PL P + QGD +W+NIV Sbjct: 182 IQGFEEGRCDALTSDSSQLYALRTQLKNPSSAIVLPEIISKEPLGPVVRQGDDKWFNIVK 241 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 WT AM+ AE+LG+ KN++++ K +TNP++QR LG+ + +IG+ LGL W Y II+ Sbjct: 242 WTEIAMLNAEDLGVNSKNVDEMLK-STNPNIQRLLGV--TGDIGKNLGLDPKWAYNIIKQ 298 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F+RN+G S LKI RG NALW GGL Y PIR Sbjct: 299 VGNYGESFERNVGQGSPLKIERGLNALWKNGGLQYGAPIR 338 >gi|326408764|gb|ADZ65829.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella melitensis M28] gi|326538482|gb|ADZ86697.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella melitensis M5-90] Length = 338 Score = 358 bits (919), Expect = 6e-97, Method: Composition-based stats. Identities = 185/339 (54%), Positives = 246/339 (72%), Gaps = 3/339 (0%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 +L LF + +A L D+K +GFL+CG+NTGL+GFA G+W GFDVD+CR Sbjct: 1 MTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFDVDYCR 60 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++SAIF DP+K+++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F I Y+D Sbjct: 61 AVASAIFGDPTKVKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYD 120 Query: 126 GQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 GQGF++ K GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P VFE++EE + Sbjct: 121 GQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPAVFEKIEEAN 180 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 AAY + RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W ++V W Sbjct: 181 AAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRW 240 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 TH A++ AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW +II+ + Sbjct: 241 THNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGV 299 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 300 GNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 338 >gi|306846158|ref|ZP_07478720.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella sp. BO1] gi|306273409|gb|EFM55270.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella sp. BO1] Length = 339 Score = 358 bits (919), Expect = 6e-97, Method: Composition-based stats. Identities = 167/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PDV+RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDVRRFLGSE--GDNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|158338716|ref|YP_001519893.1| lysine-arginine-ornithine-binding periplasmic protein, putative [Acaryochloris marina MBIC11017] gi|158308957|gb|ABW30574.1| lysine-arginine-ornithine-binding periplasmic protein, putative [Acaryochloris marina MBIC11017] Length = 343 Score = 358 bits (919), Expect = 6e-97, Method: Composition-based stats. Identities = 146/346 (42%), Positives = 217/346 (62%), Gaps = 7/346 (2%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + F ++ L + +S L + + ++CGI+ L GF+ V G++ Sbjct: 1 MIRKFSSLCAALLVALTLGSCSSSEAAGGRLQQVLAQKKVRCGISGELPGFSFVDEKGNY 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G DVD CRA+++A+FDDP ++Y PLNAKERF A+Q+ ++D+LSRNT WTL R+ S+ + Sbjct: 61 SGLDVDICRAIAAALFDDPDAVEYRPLNAKERFAAVQTGEVDVLSRNTTWTLDRDSSVRM 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 AF P+ ++DGQG ++ GI ++ ++C Q GTT E L D + + Y +V+ Sbjct: 121 AFAPVVFYDGQGVMVKADSGIKTLKDFKNRTVCTQTGTTNEKNLKDQMRKRKVDYKLVVY 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E + AAY RCD T D S L + + +P H IL +++SK PLAPA+ GD E Sbjct: 181 EDINSAYAAYAEGRCDGVTSDRSQLISRRTALPKPESHTILDEVLSKEPLAPAVADGDVE 240 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296 W ++V W A V AEELGI Q N+ +K + +P V+RFLG ++ +G++LGL+ D+ Sbjct: 241 WADVVRWVVNATVEAEELGIQQDNLASFAK-SEDPVVKRFLGTEE--ELGKSLGLSPDFA 297 Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 RI++H+GNYGE++DRNLG ++L +PRG N LWSKGGLMY+PP R Sbjct: 298 ARIVKHVGNYGEIYDRNLGPNTKLNLPRGQNQLWSKGGLMYSPPFR 343 >gi|62317227|ref|YP_223080.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella abortus bv. 1 str. 9-941] gi|83269208|ref|YP_418499.1| glutamate-binding protein [Brucella melitensis biovar Abortus 2308] gi|189022489|ref|YP_001932230.1| Solute-binding protein/glutamate receptor [Brucella abortus S19] gi|237816787|ref|ZP_04595779.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella abortus str. 2308 A] gi|254698509|ref|ZP_05160337.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 2 str. 86/8/59] gi|254731957|ref|ZP_05190535.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 4 str. 292] gi|260544464|ref|ZP_05820285.1| solute-binding protein/glutamate receptor [Brucella abortus NCTC 8038] gi|260759731|ref|ZP_05872079.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 4 str. 292] gi|260762971|ref|ZP_05875303.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 2 str. 86/8/59] gi|62197420|gb|AAX75719.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus bv. 1 str. 9-941] gi|82939482|emb|CAJ12452.1| Solute-binding protein/glutamate receptor:Bacterial extracellular solute-binding protein, family 3 [Brucella melitensis biovar Abortus 2308] gi|189021063|gb|ACD73784.1| Solute-binding protein/glutamate receptor [Brucella abortus S19] gi|237787600|gb|EEP61816.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella abortus str. 2308 A] gi|260097735|gb|EEW81609.1| solute-binding protein/glutamate receptor [Brucella abortus NCTC 8038] gi|260670049|gb|EEX56989.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 4 str. 292] gi|260673392|gb|EEX60213.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 2 str. 86/8/59] Length = 339 Score = 358 bits (919), Expect = 6e-97, Method: Composition-based stats. Identities = 164/342 (47%), Positives = 225/342 (65%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LS T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSCQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADY AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYCGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|256029203|ref|ZP_05442817.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella pinnipedialis M292/94/1] gi|265986189|ref|ZP_06098746.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis M292/94/1] gi|264658386|gb|EEZ28647.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis M292/94/1] Length = 339 Score = 358 bits (919), Expect = 6e-97, Method: Composition-based stats. Identities = 165/342 (48%), Positives = 226/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALY +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYVQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|294084021|ref|YP_003550778.1| glutamate/glutamine/aspartate/asparagine ABC transporter periplasmic substrate-binding protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292663593|gb|ADE38694.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 338 Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats. Identities = 156/323 (48%), Positives = 209/323 (64%), Gaps = 2/323 (0%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + AS L D+K RG +KC +TGL GFA G+W GFDVDFCRA ++A+ D KI Sbjct: 18 STAQASTLEDVKSRGEVKCVFSTGLAGFAFPDDKGNWTGFDVDFCRATAAAVLGDAQKIG 77 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P + RF L + + D+L RNT T R++ + L F + Y+DGQGF+ K GISS Sbjct: 78 PVPATTQNRFTVLNAGEADVLWRNTTITFSRDVGVKLTFLGVNYYDGQGFMAKKSLGISS 137 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 +L GAS+C+Q GTTTEL LADYF+++NM Y + E Y + R D T D S Sbjct: 138 ALELDGASVCIQTGTTTELNLADYFRSNNMTYEAVPVADSAEARECYNSGRGDVLTTDAS 197 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 AL + + + P +H++LP+IISK PL PA+ QGD EW +IV W YA +TAEELGITQ Sbjct: 198 ALSSQRAAMENPDDHMVLPEIISKEPLGPAVRQGDDEWADIVRWVLYATITAEELGITQA 257 Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319 N+N + T NP+++RFLG++ N+G LGL+ DW II +GNYGE+F+RN+G + Sbjct: 258 NVNTIGATTNNPEIKRFLGLEA--NLGPELGLSNDWAKNIIAQVGNYGEIFERNIGVNTP 315 Query: 320 LKIPRGYNALWSKGGLMYAPPIR 342 L I RG NALW+ GGL Y+PP R Sbjct: 316 LGIGRGVNALWTDGGLQYSPPFR 338 >gi|254690732|ref|ZP_05153986.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 6 str. 870] gi|254695963|ref|ZP_05157791.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 3 str. Tulya] gi|256255914|ref|ZP_05461450.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 9 str. C68] gi|260756304|ref|ZP_05868652.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 6 str. 870] gi|260882128|ref|ZP_05893742.1| extracellular solute-binding protein [Brucella abortus bv. 9 str. C68] gi|261216393|ref|ZP_05930674.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 3 str. Tulya] gi|297249275|ref|ZP_06932976.1| general L-amino acid transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] gi|260676412|gb|EEX63233.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 6 str. 870] gi|260871656|gb|EEX78725.1| extracellular solute-binding protein [Brucella abortus bv. 9 str. C68] gi|260918000|gb|EEX84861.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 3 str. Tulya] gi|297173144|gb|EFH32508.1| general L-amino acid transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] Length = 339 Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats. Identities = 165/342 (48%), Positives = 226/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADY AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYCGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|222148880|ref|YP_002549837.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] gi|221735866|gb|ACM36829.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] Length = 341 Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats. Identities = 176/342 (51%), Positives = 242/342 (70%), Gaps = 1/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L F + + +A L D+K +GF++CG++ G+ GF+ GDW G D Sbjct: 1 MKKTLLSVALGAAAFGFGASAASADTLSDVKAKGFVQCGVSQGIPGFSAPNDKGDWSGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CR +++A+F D SK ++ P++AK+RF ALQS +ID+L+RNT WT+ R+ SLG FR Sbjct: 61 VDYCRGIAAAVFGDASKAKFTPVSAKDRFPALQSGEIDVLTRNTTWTISRDTSLGFNFRT 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF+ K + S +LSGA++CVQ GTTTEL LADYFKA+ +KY+P+VFE+ + Sbjct: 121 VNYYDGQGFMAKKSLNVKSALELSGAAVCVQTGTTTELNLADYFKANGLKYNPVVFEKED 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + AAY A RCD YT D S LYA++L P ++V+LP++ISK PL PA+ QGD +W+++ Sbjct: 181 DATAAYDAGRCDVYTTDQSGLYAIRLKLKNPDDNVVLPEVISKEPLGPAVRQGDDKWFDV 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSW HYAMV AEE G+T KNI+ + + PD++R LG + S +G LGL +DW Y +I Sbjct: 241 VSWVHYAMVNAEEAGVTSKNIDDLKAN-GGPDIKRMLGAEAGSKLGTDLGLKEDWAYNVI 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRN+G S LKI RG NALWSKGGL Y PPIR Sbjct: 300 KLVGNYGEVFDRNVGVGSPLKIARGVNALWSKGGLQYGPPIR 341 >gi|153008737|ref|YP_001369952.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151560625|gb|ABS14123.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 339 Score = 358 bits (918), Expect = 9e-97, Method: Composition-based stats. Identities = 163/342 (47%), Positives = 223/342 (65%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S+L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKIVLGSLLAAGFAMSAQSGAQADTLSTVKERGKINCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K GI S +L GAS+C + GTTTE AD+F A+++KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGIDSALKLDGASVCTEQGTTTEQNAADFFSANSIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAFTVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEELGITQ + + ++ PDV+RFLG + + G+ LGL W Y ++ Sbjct: 241 VRWTLFAMLEAEELGITQASADA-DLNSKKPDVRRFLGSE--GDSGQQLGLEPKWAYNVV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 SKIGNYGEMFERTIGKGSLLKIDRGINALWNKGGLMYAPPVK 339 >gi|39935626|ref|NP_947902.1| ABC transporter periplasmic amino acid binding protein aapJ-1 [Rhodopseudomonas palustris CGA009] gi|39649479|emb|CAE28001.1| ABC transporter, periplasmic amino acid binding protein aapJ-1 [Rhodopseudomonas palustris CGA009] Length = 338 Score = 358 bits (918), Expect = 9e-97, Method: Composition-based stats. Identities = 169/320 (52%), Positives = 235/320 (73%), Gaps = 3/320 (0%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +A L +K RG L CG++ GL GF+ G+W G DVD CRA+++A+FDDPSK++++P Sbjct: 22 DAQTLKTVKDRGMLSCGVSQGLPGFSAPDDKGNWAGLDVDVCRAIAAAVFDDPSKVKFVP 81 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L+AK+RF ALQS +ID+LSRNT WTL R+ SLG+ F ++Y+DGQGF+ K ++S + Sbjct: 82 LSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGVNFAGVSYYDGQGFMAKKSLKVNSALE 141 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+GASICVQ GTT E +ADYFK +NMKY I F +E AY + RCD +T D+S LY Sbjct: 142 LNGASICVQTGTTNEQNVADYFKGNNMKYEVIAFANADEAVKAYESGRCDVFTSDVSQLY 201 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 A +L P++H +LP++ISK PL P + GD +W++IV WT +A+V AEELG+TQKN++ Sbjct: 202 AQRLKLATPADHAVLPEVISKEPLGPLVRHGDDQWFDIVKWTLFALVNAEELGVTQKNVD 261 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 +++K + P+++R G D N+GE LGLTKDW RI++ GNYGE F+RN+G+ S+L+I Sbjct: 262 EMAK-SDKPELKRVFGTD--GNLGEQLGLTKDWVARIVKATGNYGESFERNVGSGSKLEI 318 Query: 323 PRGYNALWSKGGLMYAPPIR 342 RG N LW+KGG+MYAPPIR Sbjct: 319 ARGLNKLWNKGGIMYAPPIR 338 >gi|23500674|ref|NP_700114.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella suis 1330] gi|163845062|ref|YP_001622717.1| hypothetical protein BSUIS_B0940 [Brucella suis ATCC 23445] gi|23464321|gb|AAN34119.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella suis 1330] gi|163675785|gb|ABY39895.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 339 Score = 358 bits (918), Expect = 9e-97, Method: Composition-based stats. Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|256111139|ref|ZP_05452175.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella melitensis bv. 3 str. Ether] gi|265992652|ref|ZP_06105209.1| extracellular solute-binding protein [Brucella melitensis bv. 3 str. Ether] gi|262763522|gb|EEZ09554.1| extracellular solute-binding protein [Brucella melitensis bv. 3 str. Ether] Length = 339 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 167/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CGI+ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGISQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|308188311|ref|YP_003932442.1| amino-acid ABC transporter-binding protein yhdW precursor [Pantoea vagans C9-1] gi|308058821|gb|ADO10993.1| Putative amino-acid ABC transporter-binding protein yhdW precursor [Pantoea vagans C9-1] Length = 341 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 159/343 (46%), Positives = 227/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ L + +A L IKK+GF++CGI+ GL GF+ A G + G Sbjct: 1 MKKMMLSTLIAAASLVAIAQQAHAGTTLDAIKKKGFVQCGISDGLPGFSYADAGGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA ++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G F Sbjct: 61 DVDVCRAAAAAVFGDATKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDGGMGFLFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H+K G+ S +L GA++C+QAGT TEL +AD+FKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCIQAGTDTELNVADFFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P E ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPLVRRGDDDWFT 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ YAM+ AEE+GI KN++Q++ T PD+ LG + + G+ L L W Y I Sbjct: 241 IVKWSLYAMLNAEEMGINSKNVDQMTAKPTTPDMAHLLGAE--GDFGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E FDRN+G S LKI RG NALW++GG+ YAPP+R Sbjct: 299 IKQVGNYQESFDRNVGKDSALKIARGQNALWNQGGIQYAPPVR 341 >gi|292486754|ref|YP_003529624.1| putative ABC transporter periplasmic protein [Erwinia amylovora CFBP1430] gi|292900844|ref|YP_003540213.1| ABC transporter substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291200692|emb|CBJ47825.1| ABC transporter, substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291552171|emb|CBA19208.1| putative ABC transport system, periplasmic component [Erwinia amylovora CFBP1430] gi|312170822|emb|CBX79082.1| putative ABC transport system, periplasmic component [Erwinia amylovora ATCC BAA-2158] Length = 341 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 161/343 (46%), Positives = 228/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF + +A L IKK+GF++CGI+ GL GF+ ANG + G Sbjct: 1 MKKMMLSTLVTAAALFTLANQAHAGTTLDAIKKKGFIQCGISDGLPGFSYADANGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA ++A+ D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G F Sbjct: 61 DVDVCRAAAAAVLGDAGKVKYTPLTAKERFTALQSGEVDILSRNTTWTSARDGGMGFIFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H+K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P + ++LP++ISK PL P + + D +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDDFIVLPEVISKEPLGPVVRRDDDDWFT 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ YAM+ AEE+GIT KN++ +S +NPD+ LG + + G+ L L W Y I Sbjct: 241 IVKWSLYAMLNAEEMGITSKNVDSMSAKPSNPDMAHLLGAE--GDYGKDLKLGNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+FDRN+G S+LKI RG NALW+ GG+ YAPP+R Sbjct: 299 IKQVGNYQEVFDRNVGKDSQLKIVRGQNALWNNGGIQYAPPVR 341 >gi|92112255|ref|YP_572183.1| extracellular solute-binding protein [Chromohalobacter salexigens DSM 3043] gi|91795345|gb|ABE57484.1| amino acid ABC transporter substrate-binding protein, PAAT family [Chromohalobacter salexigens DSM 3043] Length = 342 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 162/341 (47%), Positives = 224/341 (65%), Gaps = 2/341 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 F V++ ++L + ++ A+ L D+K+RG L CG+N GL GF+ A+G+W+G DV Sbjct: 4 KNKFIVAVPAALLLSGFATASQAATLDDVKERGNLNCGVNVGLAGFSAPDADGNWQGLDV 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + CR ++SAIF DP + + PL AKERF ALQS +ID+LSRNT WT R+ SLGL F Sbjct: 64 ETCRGIASAIFGDPDNVVFTPLTAKERFTALQSGEIDVLSRNTTWTATRDNSLGLNFTAT 123 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 T++DGQGF++ K I S+ L+GASIC+Q+GTT EL LADYF + +++ + F+ ++ Sbjct: 124 TFYDGQGFMVSKDLNIESLEGLNGASICIQSGTTHELNLADYFPSRDIEIKTVTFDTPDQ 183 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + RCD T D S L AL+L P IL +ISK PL P + QGD +W +IV Sbjct: 184 TAQGFAHGRCDVLTSDTSQLSALRLQLPEPDSVEILETLISKEPLGPVVRQGDDQWLDIV 243 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 WT +AMV AEE+G+ N++++ + NP V R LG D N GE LGL DW Y II+ Sbjct: 244 QWTIFAMVNAEEMGVNSDNVDEMRDNPPNPGVARLLGKD--GNYGEQLGLPNDWAYNIIK 301 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++GNYGE+F +G S LKI RG NALW++GG++YAPPIR Sbjct: 302 NVGNYGEVFATTVGEDSPLKIQRGMNALWNEGGILYAPPIR 342 >gi|239832600|ref|ZP_04680929.1| amino-acid ABC transporter-binding protein yhdW precursor [Ochrobactrum intermedium LMG 3301] gi|239824867|gb|EEQ96435.1| amino-acid ABC transporter-binding protein yhdW precursor [Ochrobactrum intermedium LMG 3301] Length = 339 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 161/342 (47%), Positives = 221/342 (64%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M S+L A L +K+RG L CG++ G+ GF+ G W GFD Sbjct: 1 MKNILLGSLLAAGFALSAQGGAQADTLSTVKERGKLNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGILFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GAS+C + GTTTE ADYF A+N+KY P+V + + Sbjct: 121 TAYYDGQGFLIRKDLGVDSALKLDGASVCTEQGTTTEQNAADYFSANNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +LP++ISK PL PA+ QGD +W+N+ Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAFTVLPEVISKEPLGPAVRQGDDKWFNV 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELG+TQ + + ++ PDV+RFLG + G+ LGL W Y ++ Sbjct: 241 VRWTLFALLEAEELGVTQASA-EADLNSKKPDVRRFLGSEGDG--GQQLGLEPKWAYNVV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 STIGNYGEMFERTIGKGSLLKIDRGLNALWNKGGLMYAPPVK 339 >gi|254700150|ref|ZP_05161978.1| hypothetical protein Bsuib55_04721 [Brucella suis bv. 5 str. 513] gi|261750642|ref|ZP_05994351.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5 str. 513] gi|261740395|gb|EEY28321.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5 str. 513] Length = 339 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGAVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|154248466|ref|YP_001419424.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154162551|gb|ABS69767.1| extracellular solute-binding protein family 3 [Xanthobacter autotrophicus Py2] Length = 336 Score = 357 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 158/343 (46%), Positives = 231/343 (67%), Gaps = 8/343 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F + L + + NA+ L ++K RG + CG++ GL GF+ +W G D Sbjct: 1 MKRILF----AAVGLLSLAGAVNAATLDEVKARGSVNCGVSQGLPGFSSPNDKNEWGGLD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFCRA+++AIF+DP+K+++ PL+AK+RF AL S ID+LSRNT WT+ R+ +LG F Sbjct: 57 VDFCRAIAAAIFNDPAKVKFSPLSAKDRFTALTSGAIDVLSRNTTWTMSRDTTLGFNFAG 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFERV 179 + Y+DGQGF++ K G+ S +L GASICVQ GT+ EL ++D+F+++NMK I F + Sbjct: 117 VIYYDGQGFLVRKALGLKSAKELQGASICVQTGTSNELNVSDFFRSNNMKNGEVIAFGTI 176 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E AY + RCD +T D S L A++L ++HVILP+ ISK PL P + GD +W++ Sbjct: 177 DETVKAYESGRCDVFTADRSQLAAVRLKLTNAADHVILPETISKEPLGPLVRHGDDQWFD 236 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 +V W ++A++ AEELG+TQKN+++ ++ NPDV+R LG D GE +GLT DW RI Sbjct: 237 LVKWVYFALLNAEELGVTQKNVDEQV-NSQNPDVKRLLGTD--GKYGEGIGLTADWAVRI 293 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ GNYGE++DRN+G + L I RG N LW+KGG+ Y P+R Sbjct: 294 IKATGNYGEIYDRNVGPATPLGIERGLNNLWNKGGIQYGMPVR 336 >gi|161621000|ref|YP_001594886.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella canis ATCC 23365] gi|260567799|ref|ZP_05838268.1| solute-binding protein/glutamate receptor [Brucella suis bv. 4 str. 40] gi|161337811|gb|ABX64115.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella canis ATCC 23365] gi|260154464|gb|EEW89545.1| solute-binding protein/glutamate receptor [Brucella suis bv. 4 str. 40] Length = 339 Score = 357 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDRGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|312115908|ref|YP_004013504.1| extracellular solute-binding protein family 3 [Rhodomicrobium vannielii ATCC 17100] gi|311221037|gb|ADP72405.1| extracellular solute-binding protein family 3 [Rhodomicrobium vannielii ATCC 17100] Length = 338 Score = 357 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 164/342 (47%), Positives = 235/342 (68%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + ++ C + L A L D+K RG L CG+ GL GF+ A+G+W G D Sbjct: 1 MKR--YGTLYCALALMLFCAGARAGTLDDVKARGKLNCGVTQGLAGFSSADASGNWAGLD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFCRA+++AIFDDPSK+ ++PL++K+RF ALQS +ID+LSR + WT+ + +LG++F Sbjct: 59 VDFCRAVAAAIFDDPSKVNFVPLSSKQRFTALQSGEIDVLSRVSTWTMQNDTALGISFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y DGQG ++ KK + S +LSGA +C GTTTEL +AD+F++ +M Y + FE+ + Sbjct: 119 VIYHDGQGLMVRKKLEVQSALELSGAEVCTNTGTTTELNIADFFRSRSMPYRIVAFEKSD 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AY A RCD Y+ D S+L A ++ +P EHVILPD+ISK PLAPA+ Q D +W ++ Sbjct: 179 EALKAYEAERCDVYSTDASSLSAQRVKLAQPDEHVILPDLISKEPLAPAVRQNDPQWESL 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEEL +T+ N +++S+ P V+R LG + + G ALGL KDW + I Sbjct: 239 VRWTLFALINAEELAVTKANADKLSRTDAAPGVRRLLGAES--DYGRALGLDKDWALKAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 R +GNYGE+FDRNLG QS LKI RG N LW+ GG+++APP+R Sbjct: 297 RAVGNYGEIFDRNLGQQSPLKIERGLNKLWNNGGILFAPPVR 338 >gi|315122673|ref|YP_004063162.1| cationic amino acid ABC transporter, periplasmic binding protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496075|gb|ADR52674.1| cationic amino acid ABC transporter, periplasmic binding protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 342 Score = 357 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 274/342 (80%), Positives = 310/342 (90%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 MY++FF+SILCLI L FT+F T ASIL +IKKRGFLKCGINTGL GF+E++ANGDWKGFD Sbjct: 1 MYRNFFISILCLIGLTFTNFPTYASILQNIKKRGFLKCGINTGLTGFSEIQANGDWKGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+ALS+AIFDD SK+QYLPLNAKERF++LQSKQIDILSRNTDWTLLRE LGLAFRP Sbjct: 61 VDFCKALSAAIFDDSSKVQYLPLNAKERFISLQSKQIDILSRNTDWTLLRETKLGLAFRP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ITYFDGQG +M+KK G+SS QLS ASICVQAGTTTE TLADYFKAHNMKYHPIVFERVE Sbjct: 121 ITYFDGQGLMMYKKSGVSSALQLSDASICVQAGTTTEKTLADYFKAHNMKYHPIVFERVE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 EIDAAYR+HRCD YTGD SALYAL+L+ D P+EHVIL DIISKSPL PAI+QGD+EW NI Sbjct: 181 EIDAAYRSHRCDVYTGDKSALYALRLSTDNPNEHVILKDIISKSPLGPAILQGDSEWSNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 VSWTHYA+V AEELGITQ N++Q T +PD++RFLGIDKS+NIGE+LGL+KDW Y+II Sbjct: 241 VSWTHYALVNAEELGITQSNVDQKRLTTNDPDMKRFLGIDKSANIGESLGLSKDWAYQII 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +HMGNYGE+FDRNLG+QS LKIPR YNALWSKGG+MYAPPIR Sbjct: 301 KHMGNYGEIFDRNLGSQSALKIPREYNALWSKGGIMYAPPIR 342 >gi|156741438|ref|YP_001431567.1| extracellular solute-binding protein [Roseiflexus castenholzii DSM 13941] gi|156232766|gb|ABU57549.1| extracellular solute-binding protein family 3 [Roseiflexus castenholzii DSM 13941] Length = 389 Score = 357 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 153/319 (47%), Positives = 210/319 (65%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L I+ RG L CG+N+ + GF V G + GFD+D+C+AL++AIF+D SKI+Y PL Sbjct: 71 GETLKAIQARGKLICGVNSQVPGFGFVDPTGAFSGFDIDYCKALAAAIFNDVSKIEYRPL 130 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 A++RF ALQS +ID+L RNT WTL R+ G F T++DGQG ++ K I+ + L Sbjct: 131 TAEQRFAALQSGEIDVLIRNTTWTLTRDTDNGGNFVATTFYDGQGIMVPKASNITKLEDL 190 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +GA+ICVQ GTTTEL LAD A N+ Y P FE AAY RCDA T D S L + Sbjct: 191 NGATICVQKGTTTELNLADQMNARNLAYTPATFEDANSTFAAYAEERCDAVTTDKSGLVS 250 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + P +HVIL +SK PL P + QGD +W++IV W +A AEE GIT +N++Q Sbjct: 251 RRSVLPNPDDHVILDVTLSKEPLGPMVRQGDDQWFDIVQWAVFATFAAEEFGITSQNVDQ 310 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + T P+V+R LG D + ++G LGL+KDW +I+ +GNYGE++DRNLG ++ IP Sbjct: 311 LKETDTRPEVRRLLGADPNVDLGAKLGLSKDWAANVIKAVGNYGEIYDRNLGPNTKTAIP 370 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N L+++GGL+YAPP R Sbjct: 371 RGINNLYTQGGLLYAPPFR 389 >gi|86750029|ref|YP_486525.1| extracellular solute-binding protein [Rhodopseudomonas palustris HaA2] gi|86573057|gb|ABD07614.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas palustris HaA2] Length = 337 Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats. Identities = 167/322 (51%), Positives = 231/322 (71%), Gaps = 3/322 (0%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S A L +K RG L CG++ GL GF+ G+W G DVD CR +++AIFDDPSK+++ Sbjct: 19 SAGAQTLKTVKDRGILSCGVSQGLPGFSAPDDKGNWTGLDVDVCRGIAAAIFDDPSKVKF 78 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +PL+AK+RF ALQS +ID+LSRNT WTL R+ SLG+ F ++Y+DGQGF++ K ++S Sbjct: 79 VPLSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGVNFAGVSYYDGQGFLVKKALKVNSA 138 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +L+ AS+CVQ GTT E +ADYFK +NMKY I F +E AY + RCD +T D+S Sbjct: 139 LELNSASVCVQTGTTNEQNVADYFKGNNMKYEVIAFANADEAIKAYESGRCDVFTSDVSQ 198 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 LYA +L P++HV+LP++ISK PL P + GD +W+++V WT +AM+ AEELG+TQ N Sbjct: 199 LYAQRLKLATPADHVVLPEVISKEPLGPLVRHGDDQWFDVVKWTLFAMINAEELGVTQSN 258 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 + +++K + P+++R G D N+GE LGLTKDW RII+ GNYGE F+RN+G S+L Sbjct: 259 VAEMAK-SDKPELRRVFGTD--GNLGEQLGLTKDWVARIIKATGNYGESFERNVGAGSKL 315 Query: 321 KIPRGYNALWSKGGLMYAPPIR 342 +I RG N W+KGG+MYAPPIR Sbjct: 316 EIARGLNKPWNKGGIMYAPPIR 337 >gi|254720190|ref|ZP_05182001.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella sp. 83/13] gi|265985199|ref|ZP_06097934.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13] gi|306838669|ref|ZP_07471505.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella sp. NF 2653] gi|264663791|gb|EEZ34052.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13] gi|306406312|gb|EFM62555.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella sp. NF 2653] Length = 339 Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats. Identities = 168/342 (49%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ LG+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGLGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPEAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PDV+RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDVRRFLGSE--GDNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ALVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|146278537|ref|YP_001168696.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodobacter sphaeroides ATCC 17025] gi|145556778|gb|ABP71391.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodobacter sphaeroides ATCC 17025] Length = 338 Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats. Identities = 150/342 (43%), Positives = 218/342 (63%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + L S L D+K RG L CG++TGL GF+ ANG+W GFD Sbjct: 1 MKKSVFLGTLTVAGLAAGLGSAA--TLDDVKARGELNCGVSTGLTGFSLPDANGNWTGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D +K++++P + RF AL S ++D+L+RN+ WT R+ L L F Sbjct: 59 VALCRAVAAAVLGDGTKVKFVPTTGQTRFTALASGEVDMLARNSTWTFSRDTDLKLDFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G++S +L GA++C+Q GTTTEL LAD+FK +N+ Y P+ E Sbjct: 119 VNYYDGQGFMVRKDLGVTSAKELDGATVCIQTGTTTELNLADWFKVNNLSYTPVAVETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + Y A CDAYT D S L A + P HVILP+IISK PL PA+ GD EW ++ Sbjct: 179 EGEQQYAAGACDAYTTDASGLAATRAAFADPENHVILPEIISKEPLGPAVRHGDNEWADV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++ AEE G+T N+ +++ ++ NP+++R LG++ ++G + L KDW R I Sbjct: 239 VGWTLNALIAAEEYGVTSTNMEELAANSPNPEIRRLLGVE--GDLGPMIRLDKDWAKRAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +G + + + RG NA W++GGL+YAPP R Sbjct: 297 SVGGNYGEIFAATIGEATPIGLARGLNAQWTQGGLLYAPPFR 338 >gi|283788089|ref|YP_003367954.1| Putative ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] gi|282951543|emb|CBG91242.1| Putative ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] Length = 337 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 156/339 (46%), Positives = 228/339 (67%), Gaps = 3/339 (0%) Query: 5 FFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++ +L T+A L +KK+GF++CGI+ GL GF+ A+G + G DVD Sbjct: 1 MIATLAAAGVLIAVVNQTHAGATLDAVKKKGFVQCGISDGLPGFSYADADGKFSGIDVDV 60 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 CR +++A+ D SK++Y PL AKERF ALQS ++D+LSRNT WT R+ +G++F +TY Sbjct: 61 CRGVAAAVLGDDSKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMSFTGVTY 120 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E Sbjct: 121 YDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESA 180 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A + RCD D S LYAL++ P E ++LP++ISK PL P + +GD EW+ IV W Sbjct: 181 KALESGRCDTLASDQSQLYALRIKLSNPGEWIVLPEVISKEPLGPVVRRGDDEWFAIVRW 240 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 T +AM+ AEE+G+T KN+++ + + PD+ LG + + G+ L L W Y +I+ + Sbjct: 241 TLFAMLNAEEMGVTSKNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNTWAYNVIKQV 298 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 GNYAEIFERNVGSESPLKIERGQNNLWNNGGIQYAPPVR 337 >gi|271498820|ref|YP_003331845.1| family 3 extracellular solute-binding protein [Dickeya dadantii Ech586] gi|270342375|gb|ACZ75140.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech586] Length = 343 Score = 356 bits (913), Expect = 3e-96, Method: Composition-based stats. Identities = 166/343 (48%), Positives = 235/343 (68%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF +A L I+K+GF++CGI+ GL GF+ ANG + G Sbjct: 3 MKKVIMSTLVASASLFAFINQAHAGATLDAIQKKGFVQCGISDGLPGFSYADANGKYSGI 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++AIF D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ S+GL F Sbjct: 63 DVDVCRGVAAAIFGDANKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDGSMGLLFT 122 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFK HNMKY P+ F+R Sbjct: 123 GVTYYDGIGFLAHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKTHNMKYTPVTFDRS 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P++ V+LP++ISK PL P + +GD +W+ Sbjct: 183 DESAKALDSGRCDTLASDQSQLYALRIKLGKPADFVVLPEVISKEPLGPVVRRGDEDWFA 242 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+T +N++Q++ T PD+ LG + N G+ L L DW Y+I Sbjct: 243 IVRWTLFAMLDAEEMGVTSQNVDQMAAKPTTPDMAHLLGKE--GNFGKDLKLPNDWAYKI 300 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE+F+RN+G SELKI RG N LW+KGG+ YAP +R Sbjct: 301 VKQVGNYGEVFERNVGQGSELKIKRGLNELWNKGGIQYAPAVR 343 >gi|307129011|ref|YP_003881027.1| amino acid ABC transporter periplasmic amino acid-binding protein [Dickeya dadantii 3937] gi|306526540|gb|ADM96470.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Dickeya dadantii 3937] Length = 341 Score = 356 bits (913), Expect = 3e-96, Method: Composition-based stats. Identities = 167/343 (48%), Positives = 234/343 (68%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF +A L I+K+GF++CGI+ GL GF+ ANG + G Sbjct: 1 MKKVIMSTLVASASLFAFINQAHAGATLDAIQKKGFVQCGISDGLPGFSYADANGKYSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++AIF D +K+++ PL AKERF ALQS ++D+LSRNT WT R+ +GL F Sbjct: 61 DVDVCRGVAAAIFGDANKVKFTPLTAKERFTALQSGEVDLLSRNTTWTSSRDGGMGLLFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFK HNMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKTHNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P++ V+LP++ISK PL P + +GD +WY Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPADFVVLPEVISKEPLGPVVRRGDEDWYA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GIT +N++Q++ T PD+ LG + N G+ L L DW Y+I Sbjct: 241 IVRWTLFAMLNAEEMGITSQNVDQMAAKPTTPDMSHLLGKE--GNYGKDLKLPADWAYKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE+F+RN+G SELKI RG N LW+KGG+ YAP IR Sbjct: 299 VKQVGNYGEVFERNVGQGSELKIKRGLNELWNKGGIQYAPAIR 341 >gi|83950493|ref|ZP_00959226.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseovarius nubinhibens ISM] gi|83838392|gb|EAP77688.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseovarius nubinhibens ISM] Length = 339 Score = 356 bits (913), Expect = 3e-96, Method: Composition-based stats. Identities = 155/343 (45%), Positives = 220/343 (64%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + + + A L D+K RG L CG+ TGLVGFA NG W GFD Sbjct: 1 MKKSVFLG--ALTVAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPDENGRWDGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ DP ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VGVCRAVAAAVLGDPDAVEFVPTTGKTRFTALASGEIDVLARNTTWTFSRDVDLKFTFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y++GQGF++ K+ G+SS +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+ E Sbjct: 119 VNYYNGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + + + P++HV+LP+IISK PL P + GD EW ++ Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRASFENPADHVVLPEIISKEPLGPLVRHGDDEWGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQV-SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V WT A++ AEELGIT NI ++ + NP+V R LG + N+GE LGL DW + Sbjct: 239 VRWTLNALIAAEELGITSANIGELSAAAGDNPEVNRLLGTE--GNLGEMLGLDADWAVKA 296 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ GNYGE+F++N+G S + + RG NA W+ GGL+Y+PP R Sbjct: 297 VQAGGNYGELFEKNIGENSPVGLARGLNAQWTDGGLLYSPPFR 339 >gi|126736638|ref|ZP_01752378.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseobacter sp. CCS2] gi|126713951|gb|EBA10822.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseobacter sp. CCS2] Length = 339 Score = 356 bits (913), Expect = 3e-96, Method: Composition-based stats. Identities = 152/343 (44%), Positives = 217/343 (63%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F L + F + +A+ L D+K+RG L CG+ TGLVGFA ANG W GFD Sbjct: 1 MKKTAFYG--ALTVAGFAASMASAATLDDVKERGVLNCGVTTGLVGFASPDANGVWDGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VGVCRAVAAAVLGDSDAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y+DGQGF++ + G+SS +L GA++C+Q GTTTEL LADYF+++N+ Y P+ E Sbjct: 119 INYYDGQGFLVPRDLGVSSAKELDGATVCIQTGTTTELNLADYFRSNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + + P++HV+LP+I+SK PL P + GD +W ++ Sbjct: 179 EGQQQYLAGACDVYTTDASGLAATRAAFENPADHVVLPEIVSKEPLGPLVRHGDNDWADV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTT-NPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V W+ A++ AEELG+T NI +++ T NP+V R LG + +G LGL DW Sbjct: 239 VRWSLNALIAAEELGVTSANIEELAAAPTGNPEVNRLLGTE--GELGAMLGLEADWAKNA 296 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I GNYGE+F++N+G + + + RG NA W+ GGL+Y+PP R Sbjct: 297 IAAGGNYGELFEKNIGENTPIGLARGLNAQWTDGGLLYSPPFR 339 >gi|313902268|ref|ZP_07835673.1| extracellular solute-binding protein family 3 [Thermaerobacter subterraneus DSM 13965] gi|313467419|gb|EFR62928.1| extracellular solute-binding protein family 3 [Thermaerobacter subterraneus DSM 13965] Length = 385 Score = 355 bits (912), Expect = 4e-96, Method: Composition-based stats. Identities = 138/322 (42%), Positives = 212/322 (65%), Gaps = 3/322 (0%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S L + RG L CG+N L GF+ + +G GFD DFCRA+++A+FDDP+ +++ Sbjct: 67 QAGQSRLQVVLSRGKLICGVNGQLPGFSYLDPSGQMTGFDADFCRAIAAALFDDPNAVEF 126 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 PL+A+ERF A+QS ++D+L RNT WTL R+ G+ F P T++DG G ++ K + + S+ Sbjct: 127 RPLSAQERFTAVQSGEVDVLIRNTTWTLGRDTVNGMEFLPTTFYDGGGVMVRKDRNVKSL 186 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L GA+ICV +GTT E+ L D +A + P FE +++ A Y + CDA T D S Sbjct: 187 ADLDGATICVLSGTTNEMVLTDRMRALGASFTPKTFEDADQLYATYESGGCDAVTSDKSQ 246 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + P HVIL +++SK PL PA+ D+ W+++V W +A + AEE GI +N Sbjct: 247 LAGRRAVLSDPDNHVILDEMLSKEPLGPAVKNNDSTWFDVVKWIVFATIQAEEFGINSQN 306 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 ++Q K++ NPD++RFLG++ +G+ LG++ D+ YR+I+H+GNYGE+++RNLG + Sbjct: 307 VDQF-KNSDNPDIRRFLGVE--GELGKGLGISNDFAYRVIKHVGNYGEIYERNLGPDTPF 363 Query: 321 KIPRGYNALWSKGGLMYAPPIR 342 K+ RG N LW+ GGL+Y+PP R Sbjct: 364 KLERGLNELWTNGGLLYSPPFR 385 >gi|77457200|ref|YP_346705.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77381203|gb|ABA72716.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 343 Score = 355 bits (912), Expect = 4e-96, Method: Composition-based stats. Identities = 151/343 (44%), Positives = 217/343 (63%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + F+ + L +KK+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAIVTAAAVLGVSGFAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDSTGKIVGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT T R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTMTSSRDAGMGLKFPG 122 Query: 121 ITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+ + +KY PI F+ Sbjct: 123 FITYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNGLKYTPITFDTS 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E + + RCD T D S L+A + P ++V+LP+ ISK PL P + GD EW Sbjct: 183 DESAKSLESGRCDVLTSDKSQLFAQRSKLASPKDYVVLPETISKEPLGPVVRNGDDEWLA 242 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W YA++ EE GI+ KN+ +K T NPDV R LG D G+ L L KDW +I Sbjct: 243 IVRWVGYALLNTEEAGISSKNVEAEAKSTKNPDVARMLGAD--GEYGKDLKLPKDWVVQI 300 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE+F++NLG + L+I RG NALW+ GG+ YAPP+R Sbjct: 301 VKQVGNYGEIFEKNLGKSTPLEIDRGLNALWNNGGIQYAPPVR 343 >gi|300865204|ref|ZP_07110022.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506] gi|300336795|emb|CBN55172.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506] Length = 354 Score = 355 bits (912), Expect = 4e-96, Method: Composition-based stats. Identities = 149/330 (45%), Positives = 213/330 (64%), Gaps = 2/330 (0%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 + ++ S L I RG L CG++ L GF+ V G + G DV+ CRA+++A+F Sbjct: 27 VATTSSATPQVQSRLDKIISRGTLICGVSGQLPGFSFVDEKGKYSGLDVEICRAIAAALF 86 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 DDP K++Y LNAKERF ALQS +IDILSRNT WTL R+ S GL F P+ ++D Q ++ Sbjct: 87 DDPEKVEYRNLNAKERFTALQSGEIDILSRNTTWTLSRDGSTGLEFAPVVFYDSQSIMVK 146 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K GI ++ +G SICVQ GT+TE L+D + +KY P+VFE V A Y+ RC Sbjct: 147 KDSGIQTLKDFAGKSICVQTGTSTEQNLSDQMRKLGIKYTPVVFEDVNATFATYQEGRCQ 206 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 T D S L + + P +H+IL +++SK PLAPA+ GD++W + V W YA + AE Sbjct: 207 GVTADRSQLVSKRTILPTPDQHIILNEVMSKEPLAPAVSSGDSKWADAVRWIVYATIEAE 266 Query: 253 ELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDR 312 +LG+ +NI+Q++ TT+P+V+R +G + ++G+ LGL D+ R I+ +GNYGE++DR Sbjct: 267 DLGVNSQNIDQLATTTTDPNVKRLIGTE--GDLGKGLGLPNDFALRTIKKVGNYGEIYDR 324 Query: 313 NLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NLG S LK+ RG N LW GGL+Y+PP R Sbjct: 325 NLGPSSTLKLDRGQNRLWKDGGLLYSPPFR 354 >gi|317122275|ref|YP_004102278.1| amino acid ABC transporter substrate-binding protein, PAAT family [Thermaerobacter marianensis DSM 12885] gi|315592255|gb|ADU51551.1| amino acid ABC transporter substrate-binding protein, PAAT family [Thermaerobacter marianensis DSM 12885] Length = 366 Score = 355 bits (912), Expect = 4e-96, Method: Composition-based stats. Identities = 142/318 (44%), Positives = 214/318 (67%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +RG L CG+N L GF+ + NG GFD DFCRA+++A+FDDP+ +++ PL+ Sbjct: 52 SRLQVVLQRGKLICGVNGQLPGFSYLDPNGQMTGFDADFCRAIAAALFDDPNAVEFRPLS 111 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A+ERF A+QS ++D+L RNT WTL R+ G+ F P T++DG G ++ K + + +++ L Sbjct: 112 AQERFTAVQSGEVDVLIRNTTWTLGRDTVNGMEFAPTTFYDGGGIMVRKDRNVKTLADLD 171 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GA+ICV +GTT E+ L D +A + P FE +++ A Y + CDA T D S L Sbjct: 172 GATICVLSGTTNEMVLTDRMRALGASFTPKTFEDADQLYATYESGGCDAVTSDKSQLAGR 231 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + P HVIL +++SK PL PA+ D+ W+++V W YA + AEE GIT +N++Q Sbjct: 232 RAVLSDPDNHVILDEMLSKEPLGPAVKNNDSAWFDVVKWVVYATIQAEEFGITSQNVDQF 291 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K++ NPD++RFLG++ +G+ LG++ D+ YR+I+H+GNYGE++DRNLG + K+ R Sbjct: 292 -KNSDNPDIRRFLGVE--GELGQGLGISNDFAYRVIKHVGNYGEIYDRNLGPNTPFKLER 348 Query: 325 GYNALWSKGGLMYAPPIR 342 G N LW+ GGL+YAPP R Sbjct: 349 GLNELWTNGGLLYAPPFR 366 >gi|330446205|ref|ZP_08309857.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490396|dbj|GAA04354.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 342 Score = 355 bits (912), Expect = 5e-96, Method: Composition-based stats. Identities = 161/341 (47%), Positives = 233/341 (68%), Gaps = 2/341 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + L F + + L + K+G+++CG++ GL GF+ A G W+G DV Sbjct: 4 KLSVVFAALASSTALFAANVNAEATLDKVMKQGYVQCGVSAGLPGFSNPNAKGQWEGLDV 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 +FC+A+++A D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Sbjct: 64 EFCQAIAAATIGDKSKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFTGV 123 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y+DGQGF++ K GI S +L GA++CVQ+GTTTEL LADYF+ + M+Y P+VF+ + Sbjct: 124 NYYDGQGFMVKKDMGIKSAKELDGAAVCVQSGTTTELNLADYFRVNGMEYKPVVFDTAPQ 183 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + + RCD T D S LYAL+L P+ V+LP+IISK PL P + QGD +W+NIV Sbjct: 184 TSKGFDSGRCDVLTTDQSGLYALRLNLKDPNSAVVLPEIISKEPLGPVVRQGDDQWFNIV 243 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 WT + M+ AEE G+T N+++++K++ +P+++R +G+D G+ LGL DW Y+II+ Sbjct: 244 RWTLFTMINAEEFGVTAANVDKLAKESKDPNIRRLIGLD--GPKGKGLGLKDDWGYQIIK 301 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F+R +G S LKI RG NALW++GG+ YAPPIR Sbjct: 302 QVGNYGESFERTVGEGSPLKIKRGLNALWTQGGIQYAPPIR 342 >gi|156935788|ref|YP_001439704.1| hypothetical protein ESA_03659 [Cronobacter sakazakii ATCC BAA-894] gi|156534042|gb|ABU78868.1| hypothetical protein ESA_03659 [Cronobacter sakazakii ATCC BAA-894] Length = 341 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 162/343 (47%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ LF + +A L +KK+GF++CGI+ GL GF+ A G + G Sbjct: 1 MKKMMIATLAAAGALFAVANQAHAGATLDSVKKKGFVQCGISDGLPGFSYADAGGKFTGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT R+ +G++F Sbjct: 61 DVDVCRGVAAAVFGDASKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDAGMGMSFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI KN++ + + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGIDSKNVDAKAANPSTPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNYGE+F+RN+G +S LKI RG N LW+KGG+ YAPP+R Sbjct: 299 IKQVGNYGEIFERNVGQESPLKIKRGQNNLWNKGGIQYAPPVR 341 >gi|148658095|ref|YP_001278300.1| extracellular solute-binding protein [Roseiflexus sp. RS-1] gi|148570205|gb|ABQ92350.1| extracellular solute-binding protein, family 3 [Roseiflexus sp. RS-1] Length = 389 Score = 354 bits (909), Expect = 9e-96, Method: Composition-based stats. Identities = 152/319 (47%), Positives = 210/319 (65%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L I+ RG L CG+N+ + GF V G + GFD+D+C+AL++AIF+D SK++Y PL Sbjct: 71 GETLKAIQARGKLICGVNSQVPGFGFVDPTGAFSGFDIDYCKALAAAIFNDVSKVEYRPL 130 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 A++RF ALQS +ID+L RNT WTL R+ G F T++DGQG ++ K I+ + L Sbjct: 131 TAEQRFAALQSGEIDVLIRNTTWTLTRDTDNGGNFVATTFYDGQGIMVPKASNITKLEDL 190 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +GA+ICVQ GTTTEL LAD A ++Y P VFE AAY RCDA T D S L + Sbjct: 191 NGATICVQKGTTTELNLADQMAARKLQYTPAVFEDANSTFAAYAEERCDAVTTDKSGLVS 250 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + P +HVIL +SK PL P + QGD +W++IV WT +A AEE GIT +N++Q Sbjct: 251 RRSVLPNPDDHVILDVTLSKEPLGPMVRQGDDQWFDIVQWTVFATFAAEEFGITSRNVDQ 310 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + T P+V+R LG D + ++G LGL+KDW +I+ +GNY E++DRNLG ++ IP Sbjct: 311 AKESDTRPEVRRLLGADPNVDLGAKLGLSKDWAANVIKSVGNYAEIYDRNLGPNTKTAIP 370 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N L+++GGL+YAPP R Sbjct: 371 RGINNLYTQGGLLYAPPFR 389 >gi|114706424|ref|ZP_01439326.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Fulvimarina pelagi HTCC2506] gi|114538285|gb|EAU41407.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Fulvimarina pelagi HTCC2506] Length = 339 Score = 354 bits (909), Expect = 9e-96, Method: Composition-based stats. Identities = 167/342 (48%), Positives = 237/342 (69%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F + L L + + A G +K+RG L+CG+NTGL GFA G+W+G D Sbjct: 1 MTIKFLTAALGLSVAALATAGAQAQTAGTVKERGSLRCGVNTGLPGFASQNDQGEWQGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA+++A+ DP + + PL+A +RF ALQ+ +ID+L+RNT WT+ R+ +LGL F Sbjct: 61 VDYCRAVATAVLGDPQAVTFSPLSAVQRFPALQNNEIDLLARNTTWTMDRDTALGLDFAG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ G++S +LSGA++CVQ+GTTTEL LADYF+A++M Y+P+V E Sbjct: 121 VNYYDGQGFMVKNDLGVNSALELSGATVCVQSGTTTELNLADYFEANDMDYNPVVIESQS 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++++AY + RCD T D S L A +L P H ILP+IISK PL PA+ QGD +W +I Sbjct: 181 DVNSAYDSGRCDVLTTDASGLAASRLEMSNPDNHTILPEIISKEPLGPAVRQGDDQWADI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WTHYA++ AEELG+ Q N+ ++ K++ NPD++R LG D N GE LGL +DW ++I Sbjct: 241 VRWTHYALLNAEELGVNQGNVEEM-KNSDNPDIRRLLGQDS--NFGEPLGLPQDWAAQVI 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F+RN+G + LKI RG NALW+ GGL Y P+R Sbjct: 298 SAVGNYGEIFERNIGVNTPLKIQRGQNALWTDGGLQYGMPVR 339 >gi|90409066|ref|ZP_01217191.1| general L-amino acid-binding protein [Psychromonas sp. CNPT3] gi|90309823|gb|EAS37983.1| general L-amino acid-binding protein [Psychromonas sp. CNPT3] Length = 337 Score = 354 bits (909), Expect = 9e-96, Method: Composition-based stats. Identities = 160/342 (46%), Positives = 224/342 (65%), Gaps = 5/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M L + +A L + K G L CG++TG+ GF+ + G WKG D Sbjct: 1 MK--VIKIALLFSVASLVPQLASADTLAKVLKNGTLHCGVSTGIPGFSATDSKGVWKGID 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFCR+++SA+ D SK++Y+PL AKERF ALQS +ID+L R++ WT R+ SLGL F Sbjct: 59 VDFCRSVASAVLGDASKVKYIPLTAKERFTALQSGEIDVLVRSSTWTATRDTSLGLNFAG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K ++S L GA+ C+QAGTTTEL L DYFK++NM+Y + ++ Sbjct: 119 VNYYDGQGFLVKKSLNVNSAKDLDGATFCIQAGTTTELNLTDYFKSNNMQYKAVTYDTSG 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + ++ RCDA T D S LY LKL P ++LP+IISK PL P + QGD +W+N+ Sbjct: 179 QTIDGFKKGRCDAVTSDASQLYGLKLKMKDPQSVMVLPEIISKEPLGPVVRQGDDKWFNV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A ++AEELG+T N++ + K + NP V+R LGI S G LGL++ W Y II Sbjct: 239 VRWTLFASISAEELGVTTANVDTMLK-SKNPSVKRLLGI--SGKTGADLGLSEKWAYNII 295 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +++GNYGE+F+RN+G++S L I RG N LW+ GGLMY PIR Sbjct: 296 KNVGNYGEVFERNVGSKSPLNIKRGLNNLWNNGGLMYPMPIR 337 >gi|87121084|ref|ZP_01076975.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Marinomonas sp. MED121] gi|86163576|gb|EAQ64850.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Marinomonas sp. MED121] Length = 340 Score = 354 bits (909), Expect = 9e-96, Method: Composition-based stats. Identities = 150/342 (43%), Positives = 224/342 (65%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I + S A L D+K +GF++CG++ G+ GF+ +NG+W G D Sbjct: 1 MKSNVGKLISTAAVALTVSAGATAGTLDDVKAKGFIQCGVSQGVPGFSNADSNGNWTGID 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA ++A+F D K+++ PL+AKERF ALQS +ID+LSRNT WT R+ SLGL F Sbjct: 61 VDACRAAAAAVFGDAQKVKFTPLSAKERFTALQSGEIDVLSRNTTWTYTRDTSLGLDFTA 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++DGQGF++ K G+ S +L GA++C + GTTTEL +AD+F+ H ++Y P+V ++ + Sbjct: 121 VNFYDGQGFMVRKDLGVDSALELDGATVCTEQGTTTELNMADFFRKHQLEYVPVVVQKAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AAY + RCD +T D S L A + S HVIL + ISK PL P + GD +W +I Sbjct: 181 EALAAYASGRCDVFTTDKSGLAAHRSKLADSSAHVILDETISKEPLGPVVRHGDNQWKDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V+W + V AEE+GI+ N+ ++ +T +P ++R LG + ++G L L DW Y +I Sbjct: 241 VTWAMFVQVNAEEMGISSSNVAKIKAETKDPGIRRLLGAE--GDMGAQLSLPADWAYNVI 298 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F+RN+G + + +PRG N LW++GG+MYAPP+R Sbjct: 299 AQVGNYGEVFERNVGPSTPVGLPRGINKLWTEGGVMYAPPVR 340 >gi|152998388|ref|YP_001343223.1| extracellular solute-binding protein [Marinomonas sp. MWYL1] gi|150839312|gb|ABR73288.1| extracellular solute-binding protein family 3 [Marinomonas sp. MWYL1] Length = 341 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 161/343 (46%), Positives = 228/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + I S AS L D+K +GF++CG++TG+ GF+ G+W G D Sbjct: 1 MKSNVCKLLSTAAIAATISAGAAASTLEDVKAKGFVQCGVSTGVPGFSNADDKGNWTGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA++SAIF D K ++ PL+AKER ALQS +ID+L+RNT WT R+ SLGL F Sbjct: 61 VDACRAVASAIFGDAQKAKFTPLSAKERLTALQSGEIDVLTRNTTWTYTRDASLGLDFTA 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++DGQGF++ K G+ S L GA++C + GTTTEL +AD+F+ + + Y P+V ++ + Sbjct: 121 VNFYDGQGFMVRKDLGVKSAMDLDGATVCTEQGTTTELNMADFFRKNKLSYVPVVVQKAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AAY + RCD YT D S L A + PS HVILP+ ISK PLAP + GD +W +I Sbjct: 181 EALAAYDSGRCDVYTTDKSGLAAHRTKLADPSAHVILPETISKEPLAPVVRHGDNQWKDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V+W + V AEE+GIT KN+ ++ +T +P ++R LG++ ++G LGL DW Y II Sbjct: 241 VTWALFVQVNAEEMGITSKNVAKIKAETNDPSIKRLLGVE--GDMGSQLGLPADWAYNII 298 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSK-GGLMYAPPIR 342 +GNYGE+F+RN+G + L IPRG NALW++ GG+MYAPP+R Sbjct: 299 AKVGNYGEVFERNIGPSTPLDIPRGLNALWTEAGGIMYAPPVR 341 >gi|115524735|ref|YP_781646.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodopseudomonas palustris BisA53] gi|115518682|gb|ABJ06666.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodopseudomonas palustris BisA53] Length = 337 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 166/318 (52%), Positives = 228/318 (71%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L I+ RG L CG++ GL GF+ G+W G DVD CRA+++A+F+DP+K++++PL+ Sbjct: 23 QTLKTIQDRGVLSCGVSQGLPGFSTPDDKGNWTGLDVDICRAIAAAVFNDPTKVKFVPLS 82 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AK+RF ALQS +ID+LSRNT WT+ R+ SLG+ F +TY+DGQGF++ K ++S +L+ Sbjct: 83 AKDRFTALQSGEIDVLSRNTTWTISRDTSLGVNFTGVTYYDGQGFLVKKALKVNSALELN 142 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GASICVQ GTT E +ADYFK +NMKY I F +E AY A RCD +T D+S LYAL Sbjct: 143 GASICVQTGTTNEQNVADYFKGNNMKYEVIAFSTADEALKAYEAGRCDVFTSDVSQLYAL 202 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L ++H +LP++ISK PL P + GD +W++IV WT +AM+ AEE G+TQKN+ Sbjct: 203 RLKLAAVADHAVLPEVISKEPLGPLVRHGDDQWFDIVKWTLFAMINAEEFGVTQKNVEDQ 262 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 +K PD++R G D N+GE LGLTKDW RI++ GNYGE+F+RN+G+ S+L I R Sbjct: 263 AKLDK-PDLKRMFGTD--GNLGEQLGLTKDWVIRIVKATGNYGEVFERNVGSGSKLGIAR 319 Query: 325 GYNALWSKGGLMYAPPIR 342 G N LW+KGG+ YAPPIR Sbjct: 320 GLNQLWNKGGIQYAPPIR 337 >gi|242241099|ref|YP_002989280.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] gi|242133156|gb|ACS87458.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] Length = 343 Score = 354 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 165/343 (48%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF + +A L I+K+GF++CGI+ GL GF+ A G + G Sbjct: 3 MKKVIMSTLVAGASLFALANQAHAGATLDAIQKKGFVQCGISDGLPGFSYADAGGKYTGI 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++DILSRNT WT R+ +GL F Sbjct: 63 DVDVCRGVAAAVFGDANKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDGGMGLLFT 122 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFK +NMKY P+ F+R Sbjct: 123 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKTNNMKYTPVTFDRS 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P+E V+LP++ISK PL P + +GD +W+ Sbjct: 183 DESAKALDSGRCDTLASDQSQLYALRIKLGKPTEFVVLPEVISKEPLGPVVRRGDEDWFA 242 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GIT KN++ ++ T PD+ LG + N G+ L L DW Y+I Sbjct: 243 IVRWTLFAMLNAEEMGITSKNVDALAAKPTTPDMAHLLGKE--GNFGKDLKLPNDWAYKI 300 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE+F+RN+G SELKI RG N LW+KGG+ YAP +R Sbjct: 301 VKQVGNYGEVFERNVGQGSELKIKRGLNELWNKGGIQYAPAVR 343 >gi|254703267|ref|ZP_05165095.1| hypothetical protein Bsuib36_04929 [Brucella suis bv. 3 str. 686] gi|261753898|ref|ZP_05997607.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3 str. 686] gi|261743651|gb|EEY31577.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3 str. 686] Length = 339 Score = 354 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L A L +K+RG + CG++ G+ GF+ G W GFD Sbjct: 1 MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDGWGKWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Sbjct: 61 IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A+ RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NI Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++ AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGEMF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339 >gi|261819589|ref|YP_003257695.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] gi|261603602|gb|ACX86088.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] Length = 341 Score = 354 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 160/343 (46%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + +++ LF +A L I+K+GF++CGI+ GL GF+ ANG + G Sbjct: 1 MKRIVISTLVAGASLFAAINQAHAGTTLDAIQKKGFVQCGISDGLPGFSYADANGKYSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+ F Sbjct: 61 DVDVCRGIAAAVFGDANKVKYSPLTAKERFTALQSGEVDVLSRNTTWTSSRDGGMGMLFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G++S +L GA++C+QAGT TEL +ADYFK H M+Y P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLTSAKELDGATVCIQAGTDTELNVADYFKTHKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P+E ++LP++ISK PL P + +GD EW+ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSKPAEFIVLPEVISKEPLGPVVRRGDEEWFA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+ +T KN++Q++ T PD+ LG + + G+ L L DW ++I Sbjct: 241 IVRWTLFAMLNAEEMDVTSKNVDQLAAKPTTPDMSHLLGHE--GSYGKDLKLPNDWAFKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNYGE+F+RN+G SELKI RG N LW+KGG+ YAP +R Sbjct: 299 IKQVGNYGEIFERNVGMGSELKIKRGLNELWNKGGIQYAPAVR 341 >gi|291619131|ref|YP_003521873.1| YhdW [Pantoea ananatis LMG 20103] gi|291154161|gb|ADD78745.1| YhdW [Pantoea ananatis LMG 20103] gi|327395461|dbj|BAK12883.1| putative amino-acid ABC transporter-binding protein YhdW precursor [Pantoea ananatis AJ13355] Length = 349 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 227/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ L + +A L IKK+GF++CGI+ GL GF+ A+G + G Sbjct: 9 MKKMMLSTLVAAASLLAVAQQAHAGPTLDAIKKKGFIQCGISDGLPGFSYADASGKFTGL 68 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA ++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G F Sbjct: 69 DVDICRAAAAAVFGDATKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDGGMGFMFT 128 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ HKK G+ S +L GA++C+QAGT TEL +AD+FKA+ M+Y P+ F+R Sbjct: 129 GVNYYDGIGFLTHKKAGLKSAKELDGATVCIQAGTDTELNVADFFKANKMQYTPVTFDRS 188 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P + ++LP++ISK PL P + +GD +W+ Sbjct: 189 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDDFIVLPEVISKEPLGPLVRRGDDDWFT 248 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ +AM+ AEE+GI KN+++++ PD+ LG + + G+ L L W Y I Sbjct: 249 IVKWSLFAMLNAEEMGINSKNVDEMTAKPATPDMAHLLGAE--GDFGKDLKLDNKWAYNI 306 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E FDRN+G S LKI RG NALW++GG+ YAPP+R Sbjct: 307 IKQVGNYQESFDRNVGKDSPLKIARGQNALWNQGGIQYAPPVR 349 >gi|113475659|ref|YP_721720.1| extracellular solute-binding protein [Trichodesmium erythraeum IMS101] gi|110166707|gb|ABG51247.1| extracellular solute-binding protein, family 3 [Trichodesmium erythraeum IMS101] Length = 343 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 145/318 (45%), Positives = 219/318 (68%), Gaps = 2/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L +K RG L CG+ G+ GF+ V NG++ G DVD C+A+++A+F+DP+ ++Y L+ Sbjct: 28 SRLDIVKNRGKLICGVEGGIPGFSFVDKNGNYSGIDVDICKAVAAALFNDPNLVEYRNLD 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + ERF AL ++D+LSRNT WT+ R+ ++GL F P T++DGQG ++ G+ S+ L Sbjct: 88 STERFTALNGGEVDMLSRNTTWTVSRDTTVGLEFAPTTFYDGQGMMVRANSGVESLEDLQ 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G SICV+AGTTTEL L D + N+ + F++ + AAY RCD T D S L + Sbjct: 148 GKSICVEAGTTTELNLTDNLRQRNVTAETLTFQQADPAYAAYAEGRCDGMTSDKSQLLSR 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + T P++HVIL +SK PL P D+ W+++V W YA++ AEELGITQ+N++ + Sbjct: 208 RSTLPSPNDHVILQVTMSKEPLGPVTKNNDSAWFDVVKWVTYALIEAEELGITQENVDDL 267 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 +++ NP ++RFLG+D ++GE LGL+ D+ YR+I+++GNY E++DRNLG +S+ K+PR Sbjct: 268 KQNSDNPTIRRFLGVD--GDLGEGLGLSNDFAYRVIKNVGNYAEVYDRNLGEESQFKLPR 325 Query: 325 GYNALWSKGGLMYAPPIR 342 G N LW+KGGL+Y+PP R Sbjct: 326 GMNNLWTKGGLLYSPPFR 343 >gi|163733776|ref|ZP_02141218.1| glutamate/glutamine/aspartate/asparagine-binding protein [Roseobacter litoralis Och 149] gi|161392887|gb|EDQ17214.1| glutamate/glutamine/aspartate/asparagine-binding protein [Roseobacter litoralis Och 149] Length = 338 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 154/342 (45%), Positives = 222/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L I + + A L D+K RG L CG+ TGLVGFA A+G+W GFD Sbjct: 1 MKKSVLLG--ALTIAGLAAGAAAAGTLDDVKARGTLNCGVTTGLVGFAAPNADGEWNGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VAICRAVAAAVLGDATAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFTFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G++S +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+ E Sbjct: 119 VNYYDGQGFMVPKSLGVTSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T + P+EHV+LP+IISK PL P + GD EW ++ Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRATFENPTEHVLLPEIISKEPLGPLVRHGDDEWGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++TAEELG+T N+++++ + NP+V+R LG + +GE LGL DW + I Sbjct: 239 VRWTLNALITAEELGVTSANVSEMATGSNNPEVKRLLGSE--GTLGEMLGLEADWAMKAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +N+G ++ + + RG NA W+ GGL+Y+PP R Sbjct: 297 ATQGNYGEIFAKNIGEETPIALSRGLNAQWTNGGLIYSPPFR 338 >gi|330811534|ref|YP_004355996.1| Putative amino acid ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379642|gb|AEA70992.1| Putative amino acid ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 343 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 154/345 (44%), Positives = 220/345 (63%), Gaps = 5/345 (1%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + +L + F+ + L ++K+GF++CG++ GL GF+ + G G Sbjct: 1 MKLLKSTLAVMTAAAVLGVSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDSTGKIVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D DFCRA+++A+F D +K+++ LNAKERF ALQS +ID+LSRN+ T R+ +GL F Sbjct: 61 IDADFCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDMLSRNSTMTSSRDAGMGLKF 120 Query: 119 RPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + GF+ + K G+ S +L GA+IC+QAGTTTEL ++DYF+A+ +KY PI F+ Sbjct: 121 PGFITYYDGIGFLANNKLGVKSAKELDGATICIQAGTTTELNVSDYFRANGLKYTPITFD 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 +E + + RCD T D S L+A + P ++V+LP+ ISK PL P + GD EW Sbjct: 181 TSDESAKSLESGRCDVLTSDKSQLFAQRSKLASPKDYVVLPETISKEPLGPVVRNGDDEW 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 IV WT YA++ AEE G+T KN+ +K T NPDV R LG D G+ L L KDW Sbjct: 241 LAIVRWTGYALLNAEEAGVTSKNVEAEAKSTKNPDVARMLGAD--GEYGKDLKLPKDWVV 298 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +I++ +GNYGEMF+RNLG + L+I RG NALW+ GG+ YAPP+R Sbjct: 299 QIVKQVGNYGEMFERNLGKGTPLEIDRGLNALWNAGGIQYAPPVR 343 >gi|282897630|ref|ZP_06305630.1| extracellular solute-binding protein, family 3 [Raphidiopsis brookii D9] gi|281197553|gb|EFA72449.1| extracellular solute-binding protein, family 3 [Raphidiopsis brookii D9] Length = 351 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 154/354 (43%), Positives = 231/354 (65%), Gaps = 15/354 (4%) Query: 1 MYKDFFVSILCLIILFFTSF------------STNASILGDIKKRGFLKCGINTGLVGFA 48 M K F ++ +I + + +K L CG++ L GF+ Sbjct: 1 MAKSFLFLVVGPLIFALLGCNSSPSSSTSTSTAQPRNTTDKVKTNLRLVCGVSGELPGFS 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V+ +G + G DVD CRA+++A+FD+P K+++ L+AKERF ALQ+ +ID+LSRNT WT Sbjct: 61 FVQTDGKYAGIDVDVCRAVAAALFDNPDKVEFRNLSAKERFTALQTGEIDLLSRNTTWTF 120 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R+ S+GL F P+ +DGQG ++ K GI+S++ L +IC Q GTTTE LAD + Sbjct: 121 SRDTSMGLYFSPVVLYDGQGIMIRKNSGINSLADLKNKAICTQTGTTTEQNLADQMRKRG 180 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + Y P+VFE + A Y RCDA T D SAL + + T +P +++IL +++S PLAP Sbjct: 181 ISYKPVVFEDINVTFATYSEGRCDAVTADRSALISRRTTLPKPEDNIILNELLSSEPLAP 240 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288 A+ QGD +W NIV W+ YA++ AEELGI +NI+Q ++ +P+++RFLG + N+G+ Sbjct: 241 AVAQGDPQWNNIVKWSVYALIKAEELGINSQNISQF-ANSKDPEIKRFLGTE--GNLGKG 297 Query: 289 LGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GLT D+ RII+H+GNYGE++DRNLG++++L +PRG N L+SKGGL+Y+PP R Sbjct: 298 IGLTNDFAARIIKHVGNYGEIYDRNLGSKTKLNLPRGQNELYSKGGLLYSPPFR 351 >gi|50119205|ref|YP_048372.1| general L-amino ABC transporter binding protein [Pectobacterium atrosepticum SCRI1043] gi|227114001|ref|ZP_03827657.1| general L-amino ABC transporter binding protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|253686635|ref|YP_003015825.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|49609731|emb|CAG73165.1| general L-amino ABC transporter binding protein [Pectobacterium atrosepticum SCRI1043] gi|251753213|gb|ACT11289.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 341 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 161/343 (46%), Positives = 235/343 (68%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + +++ LF +A L I+K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKRIVISTLVAGASLFAAINQAHAGATLDAIQKKGFVQCGISDGLPGFSYADASGKYSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR L++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+ F Sbjct: 61 DVDVCRGLAAAVFGDANKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDGGMGMLFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G++S +L GA++C+QAGT TEL +ADYFK H M+Y P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLTSAKELDGATVCIQAGTDTELNVADYFKTHKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSKPAEFIVLPEVISKEPLGPVVRRGDEEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+T KN++Q++ T PD+ LG + + G+ L L DW ++I Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVDQLAAKPTTPDMSHLLGHE--GSYGKDLKLPNDWAFKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNYGE+F+RN+G SELKI RG N LW+KGG+ YAP +R Sbjct: 299 IKQVGNYGEIFERNVGMGSELKIKRGLNELWNKGGIQYAPAVR 341 >gi|237730186|ref|ZP_04560667.1| amino acid ABC transporter [Citrobacter sp. 30_2] gi|226908792|gb|EEH94710.1| amino acid ABC transporter [Citrobacter sp. 30_2] Length = 341 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 159/343 (46%), Positives = 231/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K S+ +L + +A L +KK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMIIASLAAAGVLLAVANQAHAGATLDAVKKKGFVQCGISDGLPGFSYADASGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR ++SA+F D SK++Y PL AKERF ALQS ++D+LSRNT WT R+ +G++F Sbjct: 61 DVDVCRGVASAVFGDDSKVKYTPLTAKERFTALQSGEVDMLSRNTTWTSSRDAGMGMSFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ MKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+ KN+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGVNSKNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|89092424|ref|ZP_01165378.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Oceanospirillum sp. MED92] gi|89083512|gb|EAR62730.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Oceanospirillum sp. MED92] Length = 354 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 168/342 (49%), Positives = 232/342 (67%), Gaps = 5/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + S++ + SF A L D++KRG + CG++TGL GF++ NG W G D Sbjct: 18 MKR--LTSVIATGLALGLSFGAQAGTLEDVQKRGSVSCGVSTGLAGFSQKDENGTWSGLD 75 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CR++++A+ D SK+QY PL AKERF ALQS +IDILSRNT WT R+ SLGL F Sbjct: 76 VDVCRSVAAAVLGDASKVQYKPLTAKERFTALQSGEIDILSRNTTWTHTRDTSLGLNFAG 135 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+SS L GA++C+QAGTTTEL LADYF+A+ + Y+ I F+ + Sbjct: 136 VNYYDGQGFMVSKDLGVSSALDLDGAAVCIQAGTTTELNLADYFRANGITYNAITFDTSD 195 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + + RCD T D S LYAL++ PS ++LP++ISK PL P + QGD +W+NI Sbjct: 196 QTRAGFESGRCDVLTSDQSQLYALRIGLKDPSSAMVLPEVISKEPLGPVVRQGDDQWFNI 255 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ YAMV AE +GI N +Q +K NP QR +G+D + GE +G++ DW Y I+ Sbjct: 256 VKWSVYAMVEAEFMGINSANADQ-AKSQGNPGQQRLMGVDT--DSGEKMGISNDWAYNIV 312 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+RN+G S LKI RG NA W+KGG+MY+ P+R Sbjct: 313 KQVGNYGESFERNVGQGSPLKISRGLNAQWNKGGIMYSSPVR 354 >gi|251791415|ref|YP_003006136.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] gi|247540036|gb|ACT08657.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] Length = 343 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 165/343 (48%), Positives = 234/343 (68%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF +A L I+K+GF++CGI+ GL GF+ ANG + G Sbjct: 3 MKKVIMSTLVASASLFAFINQAHAGATLDAIQKKGFVQCGISDGLPGFSYADANGKYSGI 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++AIF D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +GL F Sbjct: 63 DVDVCRGVAAAIFGDANKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDGGMGLLFT 122 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFK HNMKY P+ F+R Sbjct: 123 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKTHNMKYTPVTFDRS 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P++ V+LP++ISK PL P + +GD +W+ Sbjct: 183 DESAKALDSGRCDTLASDQSQLYALRIKLGKPADFVVLPEVISKEPLGPVVRRGDEDWFA 242 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GIT +N++Q++ T PD+ LG + N G+ L L DW ++I Sbjct: 243 IVRWTLFAMLNAEEMGITSQNVDQMAAKPTTPDMAHLLGKE--GNFGKDLKLPADWAFKI 300 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE+F+RN+G SELKI RG N LW+KGG+ YAP +R Sbjct: 301 VKQVGNYGEVFERNVGQGSELKIKRGLNELWNKGGIQYAPTVR 343 >gi|312959110|ref|ZP_07773629.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] gi|311286880|gb|EFQ65442.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] Length = 343 Score = 352 bits (903), Expect = 4e-95, Method: Composition-based stats. Identities = 154/345 (44%), Positives = 220/345 (63%), Gaps = 5/345 (1%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + +L + F+ + L ++K+GF++CG++ GL GF+ A+G G Sbjct: 1 MKVLKSTLAIVCAAAVLGVSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDASGKILG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D D CRA+++A+F D +K+++ LNAKERF ALQS ++DILSRNT T R+ +GL F Sbjct: 61 IDADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDILSRNTTMTSSRDAGMGLKF 120 Query: 119 RPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+ + +KY PI F+ Sbjct: 121 PGFITYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNGLKYTPITFD 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 +E + + RCD T D S L+A + P ++V+LP+ ISK PL P + GD EW Sbjct: 181 TSDESAKSLESGRCDVLTSDKSQLFAQRSKLASPKDYVVLPETISKEPLGPVVRNGDDEW 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 IV W YAM+ AEE GIT KN+ +K T NPDV R LG D G+ L + KDW Sbjct: 241 LAIVRWVGYAMLNAEEAGITSKNVEAEAKSTKNPDVARLLGAD--GEYGKDLKVKKDWVV 298 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +I++ +GNYGE+F+RNLG + L+I RG NALW+KGG+ YAPP+R Sbjct: 299 QIVKQVGNYGEVFERNLGKSTPLEIDRGLNALWNKGGIQYAPPVR 343 >gi|119897622|ref|YP_932835.1| putative amino acid-binding protein [Azoarcus sp. BH72] gi|119670035|emb|CAL93948.1| putative amino acid-binding protein [Azoarcus sp. BH72] Length = 344 Score = 352 bits (903), Expect = 4e-95, Method: Composition-based stats. Identities = 159/347 (45%), Positives = 230/347 (66%), Gaps = 8/347 (2%) Query: 1 MYKDFF----VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K L + + + L IK++G L CG+++G+ GF+ + G+W Sbjct: 1 MKKSLRRIAPAVALGFAATLSATAAHAGATLDQIKRKGELACGVSSGVPGFSATDSRGNW 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G DVD CRAL++A+ D +K++++PL +++RF ALQ+ ++DILSRNT WTL R+ SLGL Sbjct: 61 SGLDVDVCRALAAAVLGDANKVKWVPLGSQQRFSALQAGEVDILSRNTTWTLTRDASLGL 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 AF ITY+DGQGF++ K ++S QL A ICVQ+GTTTE LADYF+ ++ P+VF Sbjct: 121 AFTAITYYDGQGFLVPKSIKVTSAKQLRDAEICVQSGTTTEKNLADYFRRQGIRVKPVVF 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDT 235 E+ + A+ RC AYT D S+L ++ +P +++ILP+ ISK PL P + +GD Sbjct: 181 EKFDASLKAFFNGRCVAYTTDASSLAGIRAGEAPKPDDYLILPETISKEPLGPIVRRGDD 240 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295 EW+ IV W YA++ AEELG+T+ N ++ + +P V R LG K+ ++G+ LGL W Sbjct: 241 EWFTIVKWVVYALIEAEELGVTRDNADKQAAG-GDPAVGRLLG--KTEDLGKPLGLDAQW 297 Query: 296 TYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 YR +R +GNYGE+F+RNLG S L++PRG NALWS+GGLMYAPP+R Sbjct: 298 AYRAVRAVGNYGEVFERNLGAGSPLRLPRGQNALWSQGGLMYAPPLR 344 >gi|149913099|ref|ZP_01901633.1| hypothetical protein RAZWK3B_03885 [Roseobacter sp. AzwK-3b] gi|149813505|gb|EDM73331.1| hypothetical protein RAZWK3B_03885 [Roseobacter sp. AzwK-3b] Length = 338 Score = 352 bits (903), Expect = 4e-95, Method: Composition-based stats. Identities = 154/342 (45%), Positives = 220/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L I ++ + A+ L D+K RG L CG+ TGLVGFA ANG+W+GFD Sbjct: 1 MKKTVILG--ALTIAGLSAGAAAAATLDDVKARGKLNCGVTTGLVGFAAPDANGEWQGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ DP+ ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VGVCRAVAAAVLGDPTAVEFVPTTGKTRFTALASGEIDLLARNTTWTFSRDVDLKFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y+DGQGF++ K G++S +L GA++C+Q GTTTEL LAD+F+ +N+ Y P+ E Sbjct: 119 INYYDGQGFMVPKSLGVTSAKELDGATVCIQTGTTTELNLADFFRVNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y CD YT D S L A + + PSEHVILP+IISK PL P + GD+EW +I Sbjct: 179 EAQPLYLEGACDVYTTDASGLAATRAAFETPSEHVILPEIISKEPLGPLVRHGDSEWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 WT A++ AEE G+T N+ +++ T NP++ R LG + +GE LGL +W R I Sbjct: 239 ARWTLNALIAAEEYGVTSANVAELANGTDNPEINRLLGTE--GTLGEMLGLDAEWAKRAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F++N+G + + + RG NA W++GGL+Y+PP R Sbjct: 297 MAGGNYGELFEKNIGENTPIGLSRGLNAQWTEGGLLYSPPFR 338 >gi|149191354|ref|ZP_01869607.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio shilonii AK1] gi|148834833|gb|EDL51817.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio shilonii AK1] Length = 342 Score = 352 bits (903), Expect = 4e-95, Method: Composition-based stats. Identities = 170/345 (49%), Positives = 233/345 (67%), Gaps = 6/345 (1%) Query: 1 MYKDFFV---SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + + + TS S L + K G L CG++TGL GF+ + G+W+ Sbjct: 1 MAKKLTLIASLVAASAAMMSTSASAADGTLDKVTKAGVLTCGVSTGLPGFSNPNSKGEWE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV++C+AL++A+ D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL Sbjct: 61 GIDVEYCQALAAAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDSALGLN 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + Y+DGQGF++ K G+SS +L GAS+CVQ+GTTTEL LADYF+ + M+Y P+VF+ Sbjct: 121 FVGVNYYDGQGFMVKKDLGLSSAKELDGASVCVQSGTTTELNLADYFRNNGMEYKPVVFD 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + + RCD T D S LYAL+L PS V+LP+IISK PL P + QGD +W Sbjct: 181 TAAQTSKGFDSGRCDVLTTDQSGLYALRLNLQDPSSAVVLPEIISKEPLGPVVRQGDDQW 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 +NI WT AMV AEE GIT KN +++ K + +P+++R LG+D G+ LG+ DW Y Sbjct: 241 FNIAKWTLAAMVNAEEYGITSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGY 297 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +II+ +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 298 QIIKQVGNYGESFERTVGEGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|331684909|ref|ZP_08385501.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli H299] gi|331078524|gb|EGI49730.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli H299] Length = 341 Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 231/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A L ++K+G ++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGVVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|187730695|ref|YP_001881960.1| amino acid ABC transporter periplasmic amino acid-binding protein [Shigella boydii CDC 3083-94] gi|187427687|gb|ACD06961.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Shigella boydii CDC 3083-94] gi|320177109|gb|EFW52125.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Shigella dysenteriae CDC 74-1112] Length = 341 Score = 351 bits (901), Expect = 8e-95, Method: Composition-based stats. Identities = 157/343 (45%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR++++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRSVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|157162750|ref|YP_001460068.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli HS] gi|170018489|ref|YP_001723443.1| extracellular solute-binding protein [Escherichia coli ATCC 8739] gi|170682914|ref|YP_001745538.1| amino acid ABC transporter periplasmic amino acid-binding protein [Escherichia coli SMS-3-5] gi|188493987|ref|ZP_03001257.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli 53638] gi|194440030|ref|ZP_03072087.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli 101-1] gi|253771901|ref|YP_003034732.1| extracellular solute-binding protein family 3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038434|ref|ZP_04872492.1| amino acid ABC transporter [Escherichia sp. 1_1_43] gi|256024158|ref|ZP_05438023.1| extracellular solute-binding protein family 3 [Escherichia sp. 4_1_40B] gi|297518104|ref|ZP_06936490.1| extracellular solute-binding protein family 3 [Escherichia coli OP50] gi|300916765|ref|ZP_07133475.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 115-1] gi|300928696|ref|ZP_07144214.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 187-1] gi|300946948|ref|ZP_07161179.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 116-1] gi|300958250|ref|ZP_07170397.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 175-1] gi|301028300|ref|ZP_07191560.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 196-1] gi|301647044|ref|ZP_07246876.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 146-1] gi|307139956|ref|ZP_07499312.1| extracellular solute-binding protein family 3 [Escherichia coli H736] gi|312972463|ref|ZP_07786637.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli 1827-70] gi|331643968|ref|ZP_08345099.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli H736] gi|331654867|ref|ZP_08355867.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli M718] gi|157068430|gb|ABV07685.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli HS] gi|169753417|gb|ACA76116.1| extracellular solute-binding protein family 3 [Escherichia coli ATCC 8739] gi|170520632|gb|ACB18810.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli SMS-3-5] gi|188489186|gb|EDU64289.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli 53638] gi|194421034|gb|EDX37064.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli 101-1] gi|226840058|gb|EEH72079.1| amino acid ABC transporter [Escherichia sp. 1_1_43] gi|253322945|gb|ACT27547.1| extracellular solute-binding protein family 3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|299878643|gb|EFI86854.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 196-1] gi|300315068|gb|EFJ64852.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 175-1] gi|300415951|gb|EFJ99261.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 115-1] gi|300453408|gb|EFK17028.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 116-1] gi|300463285|gb|EFK26778.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 187-1] gi|301074794|gb|EFK89600.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 146-1] gi|310334840|gb|EFQ01045.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli 1827-70] gi|315617078|gb|EFU97688.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli 3431] gi|323936248|gb|EGB32540.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1520] gi|323970317|gb|EGB65587.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TA007] gi|331037439|gb|EGI09663.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli H736] gi|331048249|gb|EGI20326.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli M718] Length = 341 Score = 351 bits (901), Expect = 9e-95, Method: Composition-based stats. Identities = 157/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|313500474|gb|ADR61840.1| AapJ [Pseudomonas putida BIRD-1] Length = 342 Score = 351 bits (900), Expect = 9e-95, Method: Composition-based stats. Identities = 161/342 (47%), Positives = 231/342 (67%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L S + + L +KK+GF++CG++ GL GF+ A G G D Sbjct: 3 MLKTTLAVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS ++D+LSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++KK G+SS +L GA+IC+QAGTTTEL ++D+F+A+ +KY PI F+ + Sbjct: 123 VTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + + RCD T D S L+A + P+++V+LP+ ISK PL P + +GD EW++I Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTDYVVLPETISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE GIT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAGITSKNVEAEAKATKNPDVARLLGAD--GEYGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F++NLG ++LKI RG NALW+ GG+ YAPP+R Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342 >gi|300937395|ref|ZP_07152230.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 21-1] gi|300457569|gb|EFK21062.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 21-1] Length = 354 Score = 351 bits (900), Expect = 9e-95, Method: Composition-based stats. Identities = 157/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 14 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 73 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 74 DVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 133 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 134 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 193 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 194 DESAKALESGRCDTLASDQSQLYALRIKLSNPTEWIVLPEVISKEPLGPVVRRGDDEWFS 253 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 254 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 311 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 312 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 354 >gi|323941639|gb|EGB37818.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E482] Length = 341 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 231/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + + D EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRADDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|325498846|gb|EGC96705.1| putative amino-acid ABC transporter binding protein yhdW precursor [Escherichia fergusonii ECD227] Length = 341 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPTEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+ +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGVNSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|293416693|ref|ZP_06659332.1| general L-amino acid transport system substrate-binding protein [Escherichia coli B185] gi|291432049|gb|EFF05032.1| general L-amino acid transport system substrate-binding protein [Escherichia coli B185] Length = 341 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 157/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIDTLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|288958131|ref|YP_003448472.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] gi|288910439|dbj|BAI71928.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] Length = 339 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 168/318 (52%), Positives = 235/318 (73%), Gaps = 4/318 (1%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +K+RGF++CG+N GL GF + G+W G DVD+CRA++ AIF D +K+++ PL+A Sbjct: 25 TLDTVKQRGFVQCGVNAGLPGFGNPDSAGNWTGLDVDYCRAVAVAIFGDANKVKFTPLSA 84 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ++RF A+QS ++D+LSRNT TL R+ S+GL F P+TY+DGQGF++ KK G+ S +L+G Sbjct: 85 QQRFPAIQSGEVDLLSRNTTVTLTRDTSVGLNFAPVTYYDGQGFMVPKKLGVKSAKELNG 144 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 A++CVQ+GTTTEL LADYF+A+NM Y+P+V E +E++AAY A RCD T D+S L + Sbjct: 145 ATVCVQSGTTTELNLADYFRANNMTYNPVVIESNDEVNAAYFAGRCDVLTTDVSGLAGTR 204 Query: 206 L-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 P +HVILP++ISK PLAPA+ GD +W++IV WT YA + AEE GIT KNI++ Sbjct: 205 AGVAPVPDDHVILPEVISKEPLAPAVRHGDDQWFDIVKWTVYATIQAEEFGITSKNIDEF 264 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 ++ NPD+QRFLG +G+A+GL + W Y I++ +GNY E+FDRN+G + LK+ R Sbjct: 265 -ANSKNPDIQRFLGTSP--GMGKAMGLDEKWAYNIVKKVGNYAEIFDRNVGPATPLKLER 321 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+KGGLMYA P R Sbjct: 322 GLNALWTKGGLMYAQPFR 339 >gi|89093226|ref|ZP_01166176.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Oceanospirillum sp. MED92] gi|89082522|gb|EAR61744.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Oceanospirillum sp. MED92] Length = 337 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 168/342 (49%), Positives = 232/342 (67%), Gaps = 5/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + S++ + SF A L D++KRG + CG++TGL GF++ NG W G D Sbjct: 1 MKR--LTSVIATGLALGLSFGAQAGTLEDVQKRGSVSCGVSTGLAGFSQKDENGTWSGLD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CR++++A+ D SK+QY PL AKERF ALQS +IDILSRNT WT R+ SLGL F Sbjct: 59 VDVCRSVAAAVLGDASKVQYKPLTAKERFTALQSGEIDILSRNTTWTHTRDTSLGLNFAG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+SS L GA++C+QAGTTTEL LADYF+A+ + Y+ I F+ + Sbjct: 119 VNYYDGQGFMVSKDLGVSSALDLDGAAVCIQAGTTTELNLADYFRANGITYNAITFDTSD 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + + RCD T D S LYAL++ PS ++LP++ISK PL P + QGD +W+NI Sbjct: 179 QTRAGFESGRCDVLTSDQSQLYALRIGLKDPSSAMVLPEVISKEPLGPVVRQGDDQWFNI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ YAMV AE +GI N +Q +K NP QR +G+D + GE +G++ DW Y I+ Sbjct: 239 VKWSVYAMVEAEFMGINSANADQ-AKSQGNPGQQRLMGVDT--DSGEKMGISNDWAYNIV 295 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+RN+G S LKI RG NA W+KGG+MY+ P+R Sbjct: 296 KQVGNYGESFERNVGQGSPLKISRGLNAQWNKGGIMYSSPVR 337 >gi|159184823|ref|NP_354575.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|159140108|gb|AAK87360.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 312 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 166/312 (53%), Positives = 234/312 (75%), Gaps = 1/312 (0%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K +GF+ CG++ G+ GF+ G+W G DVD+CR +++A+F DPSK +++ L++K+RF Sbjct: 2 KGKGFVTCGVSAGIPGFSNPDDKGEWSGIDVDYCRGIATAVFGDPSKAKFVALSSKDRFP 61 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 ALQS ++D+L+RNT WT+ R+ SLG FR + Y+DGQGFI K + S +LSGA++CV Sbjct: 62 ALQSGEVDVLTRNTTWTISRDTSLGFNFRTVNYYDGQGFIAKKGLNVKSALELSGAAVCV 121 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q GTTTEL LADYFK +N++Y+P+VFE+ + +AY + RCD YT D S LYA++L Sbjct: 122 QTGTTTELNLADYFKTNNLQYNPVVFEKESDATSAYDSGRCDVYTTDQSGLYAIRLKLKN 181 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 P ++++LP++ISK PL PA+ QGD +W++IV+W HYAMV AEELGIT KN+++ K + N Sbjct: 182 PDDNIVLPEVISKEPLGPAVRQGDDQWFDIVTWVHYAMVNAEELGITSKNVDE-QKTSAN 240 Query: 271 PDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALW 330 PDV+R LG ++ + IG LG+ DW Y I++ +GNYGE+FDRN+G S LKI RG NALW Sbjct: 241 PDVKRLLGTEEGTKIGTDLGVGNDWAYNIVKLVGNYGEVFDRNVGAGSPLKIERGQNALW 300 Query: 331 SKGGLMYAPPIR 342 +KGGL YAPP+R Sbjct: 301 TKGGLQYAPPVR 312 >gi|194435095|ref|ZP_03067332.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Shigella dysenteriae 1012] gi|194416657|gb|EDX32789.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Shigella dysenteriae 1012] Length = 341 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 157/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGIDSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|300817474|ref|ZP_07097690.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 107-1] gi|300824982|ref|ZP_07105081.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 119-7] gi|331670093|ref|ZP_08370938.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA271] gi|331679342|ref|ZP_08380014.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli H591] gi|300522548|gb|EFK43617.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 119-7] gi|300529772|gb|EFK50834.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 107-1] gi|331063006|gb|EGI34920.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA271] gi|331073407|gb|EGI44730.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli H591] Length = 341 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 158/343 (46%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL PA+ +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPAVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|38704156|ref|NP_312168.2| periplasmic binding transport protein [Escherichia coli O157:H7 str. Sakai] gi|157159268|ref|YP_001464743.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli E24377A] gi|168752394|ref|ZP_02777416.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4113] gi|168758500|ref|ZP_02783507.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4401] gi|168764869|ref|ZP_02789876.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4501] gi|168769134|ref|ZP_02794141.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4486] gi|168777686|ref|ZP_02802693.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4196] gi|168783839|ref|ZP_02808846.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4076] gi|168786163|ref|ZP_02811170.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC869] gi|168802616|ref|ZP_02827623.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC508] gi|191169153|ref|ZP_03030911.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli B7A] gi|193066465|ref|ZP_03047510.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli E22] gi|194430248|ref|ZP_03062745.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli B171] gi|195940012|ref|ZP_03085394.1| putative periplasmic binding transport protein [Escherichia coli O157:H7 str. EC4024] gi|208807576|ref|ZP_03249913.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208813206|ref|ZP_03254535.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208820750|ref|ZP_03261070.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209397538|ref|YP_002272730.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4115] gi|217326793|ref|ZP_03442876.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. TW14588] gi|254795210|ref|YP_003080047.1| periplasmic-binding component of an ABC superfamily putative amino acid transporter [Escherichia coli O157:H7 str. TW14359] gi|256018818|ref|ZP_05432683.1| periplasmic-binding component of an ABC superfamily predicted amino acid transporter [Shigella sp. D9] gi|260846073|ref|YP_003223851.1| putative periplasmic binding transport protein [Escherichia coli O103:H2 str. 12009] gi|260857395|ref|YP_003231286.1| putative periplasmic binding transport protein [Escherichia coli O26:H11 str. 11368] gi|260870019|ref|YP_003236421.1| putative periplasmic binding transport protein [Escherichia coli O111:H- str. 11128] gi|261228273|ref|ZP_05942554.1| periplasmic-binding component of an ABC superfamily predicted amino acid transporter [Escherichia coli O157:H7 str. FRIK2000] gi|261255131|ref|ZP_05947664.1| putative periplasmic binding transport protein [Escherichia coli O157:H7 str. FRIK966] gi|291284635|ref|YP_003501453.1| putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O55:H7 str. CB9615] gi|293406870|ref|ZP_06650796.1| amino acid ABC transporter [Escherichia coli FVEC1412] gi|293412637|ref|ZP_06655360.1| conserved hypothetical protein [Escherichia coli B354] gi|293449591|ref|ZP_06664012.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli B088] gi|298382611|ref|ZP_06992208.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli FVEC1302] gi|300898040|ref|ZP_07116411.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 198-1] gi|300904464|ref|ZP_07122310.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 84-1] gi|300925986|ref|ZP_07141809.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 182-1] gi|301304263|ref|ZP_07210377.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 124-1] gi|301326288|ref|ZP_07219661.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 78-1] gi|307314974|ref|ZP_07594562.1| extracellular solute-binding protein family 3 [Escherichia coli W] gi|309793849|ref|ZP_07688275.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 145-7] gi|13959662|sp|P58068|YHDW_ECO57 RecName: Full=Putative amino-acid ABC transporter-binding protein yhdW; Flags: Precursor gi|157081298|gb|ABV21006.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli E24377A] gi|187767128|gb|EDU30972.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4196] gi|188013752|gb|EDU51874.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4113] gi|188998861|gb|EDU67847.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4076] gi|189354670|gb|EDU73089.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4401] gi|189361744|gb|EDU80163.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4486] gi|189365193|gb|EDU83609.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4501] gi|189373879|gb|EDU92295.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC869] gi|189375432|gb|EDU93848.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC508] gi|190900795|gb|EDV60586.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli B7A] gi|192925894|gb|EDV80543.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli E22] gi|194411719|gb|EDX28044.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli B171] gi|208727377|gb|EDZ76978.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208734483|gb|EDZ83170.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208740873|gb|EDZ88555.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209158938|gb|ACI36371.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. EC4115] gi|217319160|gb|EEC27585.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli O157:H7 str. TW14588] gi|254594610|gb|ACT73971.1| periplasmic-binding component of an ABC superfamily predicted amino acid transporter [Escherichia coli O157:H7 str. TW14359] gi|257756044|dbj|BAI27546.1| putative periplasmic binding transport protein [Escherichia coli O26:H11 str. 11368] gi|257761220|dbj|BAI32717.1| putative periplasmic binding transport protein [Escherichia coli O103:H2 str. 12009] gi|257766375|dbj|BAI37870.1| putative periplasmic binding transport protein [Escherichia coli O111:H- str. 11128] gi|290764508|gb|ADD58469.1| Putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O55:H7 str. CB9615] gi|291322681|gb|EFE62110.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli B088] gi|291426876|gb|EFE99908.1| amino acid ABC transporter [Escherichia coli FVEC1412] gi|291469408|gb|EFF11899.1| conserved hypothetical protein [Escherichia coli B354] gi|298277751|gb|EFI19267.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli FVEC1302] gi|300358259|gb|EFJ74129.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 198-1] gi|300403626|gb|EFJ87164.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 84-1] gi|300417930|gb|EFK01241.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 182-1] gi|300840389|gb|EFK68149.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 124-1] gi|300846989|gb|EFK74749.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 78-1] gi|306905557|gb|EFN36089.1| extracellular solute-binding protein family 3 [Escherichia coli W] gi|308122806|gb|EFO60068.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 145-7] gi|315257196|gb|EFU37164.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 85-1] gi|320181542|gb|EFW56460.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Shigella boydii ATCC 9905] gi|320189617|gb|EFW64276.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli O157:H7 str. EC1212] gi|320639914|gb|EFX09505.1| putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O157:H7 str. G5101] gi|320645630|gb|EFX14639.1| putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O157:H- str. 493-89] gi|320650940|gb|EFX19397.1| putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O157:H- str. H 2687] gi|320656321|gb|EFX24233.1| putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662011|gb|EFX29419.1| putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O55:H7 str. USDA 5905] gi|320666847|gb|EFX33826.1| putative amino-acid ABC transporter-binding protein yhdW precursor [Escherichia coli O157:H7 str. LSU-61] gi|323154488|gb|EFZ40689.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli EPECa14] gi|323162953|gb|EFZ48788.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli E128010] gi|323173472|gb|EFZ59101.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli LT-68] gi|323178551|gb|EFZ64127.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli 1180] gi|323183028|gb|EFZ68427.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli 1357] gi|323376846|gb|ADX49114.1| extracellular solute-binding protein family 3 [Escherichia coli KO11] gi|323946885|gb|EGB42901.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H120] gi|324009098|gb|EGB78317.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 57-2] gi|324020751|gb|EGB89970.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 117-3] gi|324119448|gb|EGC13331.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1167] gi|326337965|gb|EGD61799.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli O157:H7 str. 1125] gi|326347534|gb|EGD71259.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli O157:H7 str. 1044] gi|332086450|gb|EGI91597.1| general L-amino acid-binding periplasmic protein aapJ [Shigella dysenteriae 155-74] gi|332087261|gb|EGI92394.1| general L-amino acid-binding periplasmic protein aapJ [Shigella boydii 5216-82] gi|332102250|gb|EGJ05596.1| amino acid ABC transporter [Shigella sp. D9] Length = 341 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 157/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|86605966|ref|YP_474729.1| polar amino acid ABC transporter amino acid-binding protein [Synechococcus sp. JA-3-3Ab] gi|86608412|ref|YP_477174.1| polar amino acid ABC transporter periplasmic amino acid-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86554508|gb|ABC99466.1| polar amino amino acid ABC transporter (PAAT) family, amino acid-binding protein [Synechococcus sp. JA-3-3Ab] gi|86556954|gb|ABD01911.1| polar amino amino acid ABC transporter (PAAT) family, periplasmic amino acid-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 345 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 145/332 (43%), Positives = 214/332 (64%), Gaps = 6/332 (1%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 + + +++ + IK RG L CG+N L GF + G + GFD+D CRA+++A Sbjct: 20 SMGLQSLPAWAQLGPLTDRIKARGELICGVNNQLPGFGNLDDQGKYVGFDIDICRAVAAA 79 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 +F DP K++Y+ L A R A+QS ++D++SRNT WTL R+ + F P TY+DGQGF+ Sbjct: 80 LFGDPDKVRYVYLTAANRQSAIQSGEVDMISRNTTWTLTRDREWAVTFGPTTYYDGQGFM 139 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + K G+ + L+GA+ICV AGTTTEL LAD F+A + + P+ F+ + AY R Sbjct: 140 VRKSLGVEKLEDLNGATICVIAGTTTELNLADTFRARGIAFTPVTFDGDDSSFNAYEEGR 199 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 CDA T D SAL + + + P +HVILP++ISK PL P + GD + +I++WT YA+ Sbjct: 200 CDAITSDQSALISRRASLASPDDHVILPEVISKEPLGPLVPHGDESFSDIMNWTVYALFY 259 Query: 251 AEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMF 310 AEE GIT N+++ K + +PD++RFLG + N+GE LGL DW +I+ +GNYGE+F Sbjct: 260 AEEKGITSANVDEFLK-SEDPDIRRFLGQE--GNLGELLGLKPDWVVNVIKAVGNYGEIF 316 Query: 311 DRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +R+L + L +PRG N ++KGG+ YAPP R Sbjct: 317 NRHL---TPLGVPRGLNQPYTKGGIQYAPPFR 345 >gi|320202178|gb|EFW76753.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli EC4100B] Length = 341 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 157/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMTHLLGKE--GDYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|301022227|ref|ZP_07186142.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 69-1] gi|331674783|ref|ZP_08375542.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA280] gi|284923282|emb|CBG36376.1| Putative ABC transporter, substrate-binding protein [Escherichia coli 042] gi|300397640|gb|EFJ81178.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 69-1] gi|323966446|gb|EGB61880.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli M863] gi|323979012|gb|EGB74090.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TW10509] gi|324115128|gb|EGC09092.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia fergusonii B253] gi|327251362|gb|EGE63051.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli STEC_7v] gi|331068222|gb|EGI39618.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA280] Length = 341 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+ +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGVNSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|229588541|ref|YP_002870660.1| putative amino acid ABC transporter substrate-binding protein [Pseudomonas fluorescens SBW25] gi|229360407|emb|CAY47264.1| putative amino acid ABC transport system, substrate-binding protein [Pseudomonas fluorescens SBW25] Length = 343 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 154/345 (44%), Positives = 220/345 (63%), Gaps = 5/345 (1%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + +L + F+ + L ++K+GF++CG++ GL GF+ A+G G Sbjct: 1 MKVLKSTLAIVSAAAVLGVSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDASGKILG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D D CRA+++A+F D +K+++ LNAKERF ALQS ++DILSRNT T R+ +GL F Sbjct: 61 IDADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDILSRNTTMTSSRDAGMGLKF 120 Query: 119 RPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + GF+++ K G+ S +L GA+IC+QAGTTTEL ++DYF+ +N+KY PI F+ Sbjct: 121 PGFITYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNNLKYTPITFD 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 +E + + RCD T D S L+A + P ++V+LP+ ISK PL P + GD EW Sbjct: 181 TSDESAKSLESGRCDVLTSDKSQLFAQRSKLAAPKDYVVLPETISKEPLGPVVRNGDDEW 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 IV W YAM+ AEE GIT KN+ +K T NPDV R LG D G+ L + KDW Sbjct: 241 LAIVRWVGYAMLNAEEAGITSKNVEAEAKSTKNPDVARLLGAD--GEYGKDLKVKKDWVV 298 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +I++ +GNYGE+F+RNLG + L+I RG NALW+ GG+ YAPP+R Sbjct: 299 QIVKQVGNYGEVFERNLGKSTPLEIDRGLNALWNNGGIQYAPPVR 343 >gi|26988032|ref|NP_743457.1| general amino acid ABC transporter, periplasmic binding protein [Pseudomonas putida KT2440] gi|24982752|gb|AAN66921.1|AE016320_9 general amino acid ABC transporter, periplasmic binding protein [Pseudomonas putida KT2440] Length = 342 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 162/342 (47%), Positives = 231/342 (67%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L S + + L +KK+GF++CG++ GL GF+ A G G D Sbjct: 3 MLKTTLAVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS ++D+LSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++KK G+SS +L GA+IC+QAGTTTEL ++D+F+A+ +KY PI F+ + Sbjct: 123 VTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + + RCD T D S L+A + P+E+V+LP+ ISK PL P + +GD EW++I Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE GIT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAGITSKNVEAEAKATKNPDVARLLGAD--GEYGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F++NLG ++LKI RG NALW+ GG+ YAPP+R Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342 >gi|326797351|ref|YP_004315171.1| ABC-type transporter periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] gi|326548115|gb|ADZ93335.1| ABC-type transporter, periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] Length = 340 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 150/342 (43%), Positives = 227/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + I S + A+ L D+K +GF++CG++ G+ GF+ G+W G D Sbjct: 1 MKSNMSKILTTAAIAATVSATAGAATLDDVKSKGFIQCGVSQGVPGFSNADEAGNWSGID 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA ++A+F D +++ PL+AKERF ALQS +ID+LSRNT WT R+ +LGL F Sbjct: 61 VDACRAAAAAVFGDAQAVKFTPLSAKERFTALQSGEIDMLSRNTTWTYTRDTALGLDFTA 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++DGQGF++ G++S +L GA++C + GTTTEL +AD+F+ H + Y P++ ++ + Sbjct: 121 VNFYDGQGFMVRNDLGVTSAMELDGATVCTEQGTTTELNMADFFRKHGLSYVPVIVQKAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AAY + RCD +T D S L A + PS HVILP+ ISK PL P + GD +W +I Sbjct: 181 EALAAYASGRCDVFTTDKSGLAAHRSKLADPSAHVILPETISKEPLGPVVRHGDNQWKDI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V+W + V AEE+GI+ KN+ ++ ++ +P ++R LG + N+GE+LGL DW Y II Sbjct: 241 VTWAMFVQVNAEEMGISSKNVAKIKAESKDPAIRRLLGAE--GNMGESLGLGADWAYDII 298 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F+ N+G + + +PRG N LW++GG+MYAPP+R Sbjct: 299 AEVGNYGEVFENNVGPNTPVGLPRGINNLWTEGGVMYAPPVR 340 >gi|237799855|ref|ZP_04588316.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022710|gb|EGI02767.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 322 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 159/324 (49%), Positives = 223/324 (68%), Gaps = 2/324 (0%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + + L I+K+GF++CG++ GL GF+ +NG G D D CRA+++A+F D +K+ Sbjct: 1 GAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSNGKITGIDADVCRAVAAAVFGDATKV 60 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ LNAKERF ALQS +IDILSRNT WT R+ +GL F +TY+DG GF+++ K G+ Sbjct: 61 KFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTGVTYYDGIGFLVNNKLGVK 120 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ +E + RCD T D Sbjct: 121 SAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSDESAKSLEGGRCDVLTSDQ 180 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S LYA + +P ++V+LP++ISK PL P + +GD EW++IV WT +AM+ AEE IT Sbjct: 181 SQLYAQRSKLAKPDDYVVLPEVISKEPLGPVVRKGDEEWFSIVRWTLFAMLNAEEAKITS 240 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 KN+ +K T NPDV R LG D G+ L L KDW +I++ +GNYGE+F+RNLG + Sbjct: 241 KNVEAEAKSTKNPDVARMLGAD--GTYGKDLKLPKDWVVQIVKQVGNYGEVFERNLGENT 298 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 LKI RG NALW+ GG+ YAPPIR Sbjct: 299 PLKIKRGQNALWNAGGIQYAPPIR 322 >gi|262404012|ref|ZP_06080567.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. RC586] gi|262349044|gb|EEY98182.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. RC586] Length = 342 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 170/338 (50%), Positives = 232/338 (68%), Gaps = 3/338 (0%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 I L S S S L + +GF+ CG++TGL GF+ A GDW+G DV++C Sbjct: 8 LASVIAASSALMTYSASAAESTLDKVLSQGFITCGVSTGLPGFSNPNAKGDWEGIDVEYC 67 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 +AL++A+ D +K++++PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+ Sbjct: 68 QALAAAVLGDKTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYY 127 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQGF++ K GI S +L GAS+CVQ+GTTTEL LADYF+ + MKY P+VF+ + Sbjct: 128 DGQGFMVKKDLGIKSAKELDGASVCVQSGTTTELNLADYFRNNGMKYKPVVFDTSAQTSK 187 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + A RCD T D S LYAL+L ++P V+LP+IISK PL P + Q D +W+N+ W Sbjct: 188 GFDAGRCDVLTTDQSGLYALRLNLEKPDAAVVLPEIISKEPLGPVVRQDDDKWFNVAKWV 247 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 YAMV AEE GIT KN++++ K + NP+V+R LG+D G LG+ DW+Y+I++ +G Sbjct: 248 LYAMVNAEEYGITSKNVDEMMK-SENPEVKRILGLDGPKGTG--LGIRDDWSYQIVKQVG 304 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NYGE F+R +G+ S LKI RG NALW+ GG MYAPPIR Sbjct: 305 NYGESFERTVGSGSPLKIDRGVNALWNAGGFMYAPPIR 342 >gi|119489532|ref|ZP_01622293.1| polar amino acid transport system substrate-binding proetin [Lyngbya sp. PCC 8106] gi|119454611|gb|EAW35758.1| polar amino acid transport system substrate-binding proetin [Lyngbya sp. PCC 8106] Length = 357 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 136/326 (41%), Positives = 214/326 (65%), Gaps = 3/326 (0%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ S L +K RG L CG++ G+ GF+ V NG++ G DVD C+A+++AIF+DP+ Sbjct: 35 GGGSGTSQSRLDTVKSRGKLVCGVDGGIPGFSFVNENGEYSGLDVDMCKAVAAAIFNDPN 94 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 ++Y L++ ERF AL+S ++D+LSRNT WT+ R+ S+G+ F P T++DGQG ++ + G Sbjct: 95 AVEYRNLDSTERFEALKSGEVDMLSRNTTWTITRDTSVGMEFAPTTFYDGQGMMVRRDSG 154 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+S+ G ++CV+AGTTTEL L D + + +++ + AAY CD T Sbjct: 155 ITSLEDFEGRTVCVEAGTTTELNLTDNMRKAGVNSETKTYQQADPAYAAYAEGACDGMTS 214 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S L A + T P +H++L +SK PL P I D+ W+++V WT +A++ EELGI Sbjct: 215 DKSQLVARRSTLPNPDDHILLDVTMSKEPLGPVTINNDSAWFDVVKWTTFALIEGEELGI 274 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 Q N++Q+ K + P ++RFLGI+ ++G+ LGL ++ +I+ +GNYGE+++RNLG Sbjct: 275 NQANVDQL-KSSEEPTIRRFLGIE--GDLGQGLGLDNEFAANVIKQVGNYGEIYERNLGQ 331 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 S+ ++ RG NALW+ GGL+Y+PP R Sbjct: 332 GSQFRLDRGQNALWNNGGLLYSPPFR 357 >gi|331664877|ref|ZP_08365782.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA143] gi|331058125|gb|EGI30107.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA143] Length = 341 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 157/343 (45%), Positives = 231/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKEANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|104783492|ref|YP_609990.1| general amino acid ABC transporter periplasmic binding protein [Pseudomonas entomophila L48] gi|95112479|emb|CAK17206.1| general amino acid ABC transporter, periplasmic binding protein [Pseudomonas entomophila L48] Length = 342 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 165/342 (48%), Positives = 232/342 (67%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L TSF+ + L +KK+GF++CG++ GL GF+ A G G D Sbjct: 3 MLKTTLAVLTAAAALGATSFAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS ++D+LSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+ +KK G+SS +L GA+IC+QAGTTTEL ++DYF+A+ +KY PI F+ + Sbjct: 123 VTYYDGVGFLANKKLGVSSAKELDGATICIQAGTTTELNVSDYFRANGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + + RCD T D S L+A + P+E+V+LP+ ISK PL P + +GD EW++I Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE GIT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAGITSKNVEAEAKSTKNPDVARLLGAD--GEYGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F++NLG ++LKI RG NALW+ GG+ YAPP+R Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342 >gi|13959721|sp|P45766|YHDW_ECOLI RecName: Full=Putative amino-acid ABC transporter-binding protein yhdW; Flags: Precursor Length = 341 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 157/343 (45%), Positives = 231/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + A L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAXAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|170720090|ref|YP_001747778.1| extracellular solute-binding protein [Pseudomonas putida W619] gi|169758093|gb|ACA71409.1| extracellular solute-binding protein family 3 [Pseudomonas putida W619] Length = 342 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 160/342 (46%), Positives = 230/342 (67%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L S + + L +KK+GF++CG++ GL GF+ A G G D Sbjct: 3 MLKTTLAVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS ++D+LSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++KK G+SS +L GA+IC+QAGTTTEL ++DYF+A+ +KY PI F+ + Sbjct: 123 VTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDYFRANGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + + RCD T D S L+A + P+++V+LP+ ISK PL P + +GD EW++I Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAGPTDYVVLPETISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE G+T KN+ +K T NPD R LG D G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAGVTSKNVEAEAKSTKNPDTARLLGAD--GEYGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F++NLG ++LKI RG NALW+ GG+ YAPP+R Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342 >gi|84499808|ref|ZP_00998096.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Oceanicola batsensis HTCC2597] gi|84392952|gb|EAQ05163.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Oceanicola batsensis HTCC2597] Length = 339 Score = 350 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 159/343 (46%), Positives = 224/343 (65%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + + + A+ L D+K RG L CG++TGL GF+ ANG+W+GFD Sbjct: 1 MKKSVFLG--ALTVAGLAAGAAAAATLDDVKARGTLNCGVSTGLAGFSAPNANGEWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ DP+ ++++P K RF AL S +ID+L+RNT WTL R+ L F Sbjct: 59 VAVCRAVATAVLGDPNAVEFVPTTGKTRFTALASGEIDMLARNTTWTLSRDADLKFTFIG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGFI K G+SS +L GA++C+Q GTTTEL LAD+F+ +N+ Y P+ E Sbjct: 119 VNYYDGQGFITPKALGVSSAKELDGATVCIQTGTTTELNLADFFRVNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T + P++HVILP+IISK PL P + GD+EW ++ Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFETPTDHVILPEIISKEPLGPLVRHGDSEWGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTN-PDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V W+ AM+ AEELG+T N+ ++S TT+ P++ R LG + N+GE LGL DW I Sbjct: 239 VRWSLNAMIAAEELGVTSANVEEMSSSTTDNPEINRLLGTE--GNLGEMLGLEADWAKNI 296 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I +GNYGE+F+ N+G + + + RG NA W+ GGL+YAPP R Sbjct: 297 IMQVGNYGEVFEANIGESTPIGLARGLNAQWTDGGLLYAPPFR 339 >gi|260778552|ref|ZP_05887444.1| amino acid ABC transporter amino acid-binding protein [Vibrio coralliilyticus ATCC BAA-450] gi|260604716|gb|EEX31011.1| amino acid ABC transporter amino acid-binding protein [Vibrio coralliilyticus ATCC BAA-450] Length = 342 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 171/342 (50%), Positives = 232/342 (67%), Gaps = 4/342 (1%) Query: 2 YKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 S++ L TS S S L + K+GFL CG++TGL GF+ + G+W+G D Sbjct: 4 KLTLLASVVAASTALMSTSASAADSTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V++C+AL+SA+ D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F Sbjct: 64 VEYCQALASAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+ S +L GAS+CVQ+GTTTEL LADYF+ + M Y P+VF+ Sbjct: 124 VNYYDGQGFMVKKDLGLKSAKELDGASVCVQSGTTTELNLADYFRNNGMSYKPVVFDTAA 183 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPSSAEVLPEIISKEPLGPVVRQGDDQWFNI 243 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 WT AMV AEE GI+ KN +++ K + +P+V+R LG+D G+ LG+ DW Y++I Sbjct: 244 AKWTLSAMVNAEEYGISSKNADEMLK-SKDPNVKRILGVD--GPKGKGLGIRDDWGYQVI 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 301 KQVGNYGESFERTVGKGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|77462291|ref|YP_351795.1| ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein [Rhodobacter sphaeroides 2.4.1] gi|221638145|ref|YP_002524407.1| Cationic amino acid ABC transporter periplasmic binding protein [Rhodobacter sphaeroides KD131] gi|77386709|gb|ABA77894.1| ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein [Rhodobacter sphaeroides 2.4.1] gi|221158926|gb|ACL99905.1| Cationic amino acid ABC transporter, periplasmic binding protein precursor [Rhodobacter sphaeroides KD131] Length = 338 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 149/342 (43%), Positives = 219/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + + +A+ L D+K RG L CG++TGL GF+ ANG+W GFD Sbjct: 1 MTKSVFLG--TLTVAGLAAGLASAATLDDVKARGELNCGVSTGLTGFSLPDANGNWTGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D +K++++P + RF AL S ++D+L+RN+ WT R+ L L F Sbjct: 59 VSLCRAVAAAVLGDGTKVKFVPTTGQTRFTALASGEVDMLARNSTWTFSRDTDLKLDFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G++S +L GA++C+Q GTTTEL LAD+FK +N+ Y P+ E Sbjct: 119 VNYYDGQGFMVRKDLGVTSAKELDGATVCIQTGTTTELNLADWFKVNNLSYTPVAVETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + Y A CDAYT D S L A + P H+ILP+IISK PL PA+ GD EW +I Sbjct: 179 EGEQQYAAGACDAYTTDASGLAATRAAFADPENHIILPEIISKEPLGPAVRHGDNEWADI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++ AEE G+T N+ +++ ++ NP++QR LG+ ++G+ + L DW R I Sbjct: 239 VRWTLNALIAAEEYGVTSANMEELAANSPNPEIQRLLGV--QGDLGKMIRLDNDWAKRAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +G + + + RG NA W++GGL+YAPP R Sbjct: 297 AVGGNYGEIFAATIGEATPIGLARGLNAQWTQGGLLYAPPFR 338 >gi|148549630|ref|YP_001269732.1| extracellular solute-binding protein [Pseudomonas putida F1] gi|148513688|gb|ABQ80548.1| extracellular solute-binding protein, family 3 [Pseudomonas putida F1] Length = 342 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 161/342 (47%), Positives = 231/342 (67%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L S + + L +KK+GF++CG++ GL GF+ A G G D Sbjct: 3 MLKTTLAVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS ++D+LSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFRDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++KK G+SS +L GA+IC+QAGTTTEL ++D+F+A+ +KY PI F+ + Sbjct: 123 VTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + + RCD T D S L+A + P+++V+LP+ ISK PL P + +GD EW++I Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTDYVVLPETISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE GIT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAGITSKNVEAEAKATKNPDVARLLGAD--GEYGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F++NLG ++LKI RG NALW+ GG+ YAPP+R Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342 >gi|319793876|ref|YP_004155516.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315596339|gb|ADU37405.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 344 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 154/346 (44%), Positives = 227/346 (65%), Gaps = 6/346 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M F +++ L + + L +K+RG +KCG+ G+ GF+ G+W Sbjct: 1 MKNRFRPALIAAASLVAFATAAPAFAGKTLDAVKQRGTVKCGVTNGVAGFSAPDTQGNWS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DVD CRA+++A+ D K+ ++PLN+++RF ALQ+ +IDIL+RNT WTL R+ SLG Sbjct: 61 GLDVDTCRAIAAAVLGDAKKVDFVPLNSQQRFSALQAGEIDILARNTTWTLTRDASLGFN 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F ITY+DGQGF++ KK ++S QL A+IC Q+GTT E ++DYF+A N+ +VFE Sbjct: 121 FTTITYYDGQGFLVPKKLKVTSAKQLKNATICTQSGTTNEKNVSDYFRAQNIPVKTVVFE 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E A+ + RC A+T D SAL L+ P +++ILP++ISK PLAP + +GD E Sbjct: 181 SFEASFKAFFSGRCQAFTTDASALAGLRNKEAPNPDDYIILPELISKEPLAPLVRRGDDE 240 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296 W+ I W A++ AEE G+TQ N +++ + +P QR +G ++G+ LGL KDW+ Sbjct: 241 WFAIAKWVPNALIEAEEAGVTQANADELKASSKDPAQQRLVGT--GEDLGKLLGLDKDWS 298 Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +R I+ +GNYGE+F+RN+G +S LK+PRG N LWSKGGL+YAPP+R Sbjct: 299 FRAIKAVGNYGEVFERNVGPKSVLKLPRGSNNLWSKGGLIYAPPVR 344 >gi|258544539|ref|ZP_05704773.1| general amino acid ABC superfamily ATP binding cassette transporter, periplasmic binding protein [Cardiobacterium hominis ATCC 15826] gi|258520221|gb|EEV89080.1| general amino acid ABC superfamily ATP binding cassette transporter, periplasmic binding protein [Cardiobacterium hominis ATCC 15826] Length = 350 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 159/342 (46%), Positives = 233/342 (68%), Gaps = 6/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L L T+ A L D+KKRG L+CG+ L GF+ +G W G D Sbjct: 15 MKKSLLFTALGLATLVQTT---QADTLDDVKKRGELRCGVTQALAGFSVADDSGRWTGLD 71 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRAL+SAIFDDP K+ + P ++KERF LQS +ID+L+R T WT R++ + F Sbjct: 72 VDYCRALASAIFDDPEKVSFRPTSSKERFTVLQSGEIDVLARVTTWTTSRDVDMPFDFIG 131 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K GI SV +LSGASIC GT+TE +ADYFK++ M+Y P++FE+ E Sbjct: 132 VNYYDGQGFMVRKDLGIKSVKELSGASICTNTGTSTETNMADYFKSNGMEYKPVIFEKSE 191 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E+ +AY A RCDAY+ D+S LY + +P +H+ILP++ISK PL P + Q D + ++ Sbjct: 192 EVKSAYDAGRCDAYSSDVSGLYVQRKLLAKPDDHIILPEVISKEPLGPLVRQEDPGFKDL 251 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 +WTH+ MV AEE G+++ N+ ++ K + NP+++R LG++ + + LG+ D+ +II Sbjct: 252 AAWTHFCMVNAEEYGVSKANLEEMKK-SDNPNIRRLLGLEANG--ADKLGVGADFCAKII 308 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +H+GNYGE +DRN+G S L I RG N LW++GG+M+APP+R Sbjct: 309 KHVGNYGEAYDRNVGKDSPLNIERGLNRLWNQGGIMFAPPLR 350 >gi|51245286|ref|YP_065170.1| amino acid ABC transporter, periplasmic substrate-binding protein [Desulfotalea psychrophila LSv54] gi|50876323|emb|CAG36163.1| probable amino acid ABC transporter, periplasmic substrate-binding protein [Desulfotalea psychrophila LSv54] Length = 339 Score = 349 bits (895), Expect = 3e-94, Method: Composition-based stats. Identities = 162/342 (47%), Positives = 234/342 (68%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + + +A+ L +K++G++ G++ ++GF+ + G W+G D Sbjct: 1 MKSVCNRLVGAALGSLLLASTVSATTLDVVKEKGYVNAGVSGKVIGFSAPDSQGVWRGMD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF RA++SAIFDDP+K ++ P+ KE F ALQS +I+IL+RNT WT R+ LGL F Sbjct: 61 VDFVRAVASAIFDDPNKARFTPVAFKEAFAALQSGEIEILARNTTWTFQRDTKLGLEFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ++DGQGF++HK G+ S +L GAS+C Q+GTTTEL +ADYF +H M Y P+V+E + Sbjct: 121 PLFYDGQGFLVHKDLGVKSALELDGASVCTQSGTTTELNMADYFASHGMTYLPVVYESAD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y RCD YT D SAL A + P +H ILP+IISK PL PA+ QGD +W ++ Sbjct: 181 EATVIYDTGRCDVYTTDSSALAARRTILSNPDDHEILPEIISKEPLGPAVRQGDQQWSDL 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +A++T EELGIT +N++Q+ + N +V+RFLG+D + G+ +GL+ DW YRII Sbjct: 241 VRWTLFALITGEELGITSENVDQML-TSENTEVKRFLGVDS--DFGQHIGLSHDWAYRII 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +H+GNY E+F+RN+G+Q+ L + RG NALW+ GGLMYAPPIR Sbjct: 298 KHVGNYSEVFERNVGSQTALGLDRGLNALWTNGGLMYAPPIR 339 >gi|54309363|ref|YP_130383.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium profundum SS9] gi|46913799|emb|CAG20581.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium profundum SS9] Length = 342 Score = 349 bits (895), Expect = 3e-94, Method: Composition-based stats. Identities = 162/345 (46%), Positives = 237/345 (68%), Gaps = 6/345 (1%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K +I LF + S + L + K+G+++CG++ GL GF+ + G+W+ Sbjct: 1 MTKKPSVLLAAIATTSALFAVNASAANTTLEKVMKQGYVQCGVSAGLPGFSNPNSKGEWE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV+FC+A+++A D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL Sbjct: 61 GLDVEFCQAIAAATVGDKTKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDSALGLN 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F ++Y+DGQGF++ K+ G+SS +L GA++CVQ+GTTTEL LADYF+ + MKY P+VF+ Sbjct: 121 FAGVSYYDGQGFMVKKELGVSSAKELDGAAVCVQSGTTTELNLADYFRVNGMKYSPVVFD 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + + RCD T D S LYAL+L P+ V+LP++ISK PL P + QGD +W Sbjct: 181 TAPQTSKGFDSGRCDVLTTDQSGLYALRLNLADPASAVVLPEVISKEPLGPVVRQGDDQW 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 +NIV WT AM+ AEE G+T N++++ K++ +P+++R +G+D G+ LGL DW Y Sbjct: 241 FNIVKWTLSAMLNAEEYGVTSANVDKM-KESKDPNIRRLIGLD--GPKGKGLGLNDDWGY 297 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +I++ +GNYGE F+R +G S LKI RG NALW GG+ YA PIR Sbjct: 298 QIVKQVGNYGESFERTVGTGSPLKIERGLNALWKDGGIQYAAPIR 342 >gi|26249860|ref|NP_755900.1| putative amino-acid ABC transporter binding protein yhdW [Escherichia coli CFT073] gi|110643514|ref|YP_671244.1| putative amino-acid ABC transporter binding protein YhdW precursor [Escherichia coli 536] gi|191173851|ref|ZP_03035372.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli F11] gi|227887996|ref|ZP_04005801.1| amino-acid ABC superfamily ATP binding cassette transporter binding protein yhdW precursor [Escherichia coli 83972] gi|300979705|ref|ZP_07174655.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 200-1] gi|300991067|ref|ZP_07179488.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 45-1] gi|301047875|ref|ZP_07194922.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 185-1] gi|26110288|gb|AAN82474.1|AE016767_234 Putative amino-acid ABC transporter binding protein yhdW precursor [Escherichia coli CFT073] gi|110345106|gb|ABG71343.1| putative amino-acid ABC transporter binding protein YhdW precursor [Escherichia coli 536] gi|190905901|gb|EDV65519.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli F11] gi|227835392|gb|EEJ45858.1| amino-acid ABC superfamily ATP binding cassette transporter binding protein yhdW precursor [Escherichia coli 83972] gi|300300218|gb|EFJ56603.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 185-1] gi|300307923|gb|EFJ62443.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 200-1] gi|300406988|gb|EFJ90526.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 45-1] gi|307555363|gb|ADN48138.1| putative periplasmic amino-acid ABC transporter binding protein [Escherichia coli ABU 83972] gi|315294821|gb|EFU54164.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 153-1] gi|324015878|gb|EGB85097.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 60-1] Length = 341 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPTEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W + I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAFNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|149203333|ref|ZP_01880303.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. TM1035] gi|149143166|gb|EDM31205.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. TM1035] Length = 339 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 155/343 (45%), Positives = 220/343 (64%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + + ++ A+ L D+K RG L CG+ TGLVGFA ANG W+GFD Sbjct: 1 MKKTVFLG--ALTVAGLAAGASAAATLDDVKARGKLNCGVTTGLVGFAAPDANGVWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+L+RNT WT R+ L F Sbjct: 59 VAICRAVAAAVLGDGNAVEFVPTTGKTRFTALASGEIDLLARNTTWTFSRDTDLKFDFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+SS +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+ E Sbjct: 119 VNYYDGQGFLVPKSLGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L + + + P +HVILP+IISK PL P + GD +W +I Sbjct: 179 EGQQQYLAGACDTYTTDASGLASTRAAFENPGDHVILPEIISKEPLGPLVRHGDNDWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQV-SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V WT YA+V AEE+GIT NI ++ + NP++ R LG + +G +GL DW R Sbjct: 239 VRWTFYALVAAEEMGITSANIGELSAAAGANPEINRILGTE--GELGAMIGLDNDWAKRA 296 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I GNYGE+F++N+G ++ + + RG NA W++GG+MYAPP R Sbjct: 297 ISVGGNYGEIFEKNIGEKTPIGLARGLNAQWTQGGIMYAPPFR 339 >gi|90410648|ref|ZP_01218664.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium profundum 3TCK] gi|90328889|gb|EAS45173.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium profundum 3TCK] Length = 342 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 163/345 (47%), Positives = 239/345 (69%), Gaps = 6/345 (1%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F +I LF + S + L + K+G+++CG++ GL GF+ + G+W+ Sbjct: 1 MAKKSSVLFAAIATTSALFAVNASAANTTLEKVMKQGYVQCGVSAGLPGFSNPNSKGEWE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV+FC+A+++A D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL Sbjct: 61 GLDVEFCQAIAAATVGDKTKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDSALGLN 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F ++Y+DGQGF++ K+ G+SS +L GA++CVQ+GTTTEL LADYF+ + MKY P+VF+ Sbjct: 121 FAGVSYYDGQGFMVKKELGVSSAKELDGAAVCVQSGTTTELNLADYFRVNGMKYSPVVFD 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + + RCD T D S LYAL+L P+ V+LP++ISK PL P + QGD +W Sbjct: 181 TAPQTSKGFDSGRCDVLTTDQSGLYALRLNLAEPASAVVLPEVISKEPLGPVVRQGDDQW 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 +NIV WT AM+ AEE G+T N++++ K++ +P+++R +G+D G+ LGL+ DW Y Sbjct: 241 FNIVKWTLSAMLNAEEYGVTSANVDKM-KESKDPNIRRLIGLD--GPKGKGLGLSDDWGY 297 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +I++ +GNYGE F+R +G S LKI RG NALW GG+ YA PIR Sbjct: 298 QIVKQVGNYGESFERTVGTGSPLKIERGLNALWKDGGIQYAAPIR 342 >gi|167035543|ref|YP_001670774.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166862031|gb|ABZ00439.1| extracellular solute-binding protein family 3 [Pseudomonas putida GB-1] Length = 342 Score = 348 bits (894), Expect = 4e-94, Method: Composition-based stats. Identities = 161/342 (47%), Positives = 231/342 (67%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L S + + L +KK+GF++CG++ GL GF+ A G G D Sbjct: 3 MLKTTLAVLTAAAALGAVSNAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS ++D+LSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++KK G+SS +L GA+IC+QAGTTTEL ++D+F+A+N+KY PI F+ + Sbjct: 123 VTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANNLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + + RCD T D S L+A + P+++V+LP+ ISK PL P + +GD EW++I Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTDYVVLPETISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE GIT KN+ +K T NPDV R LG G+ L L KDW +I+ Sbjct: 243 VKWTLFAMLNAEEAGITSKNVEAEAKATKNPDVARLLG--GDGEYGKDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+F++NLG ++LKI RG NALW+ GG+ YAPP+R Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342 >gi|260768536|ref|ZP_05877470.1| amino acid ABC transporter amino acid-binding protein [Vibrio furnissii CIP 102972] gi|260616566|gb|EEX41751.1| amino acid ABC transporter amino acid-binding protein [Vibrio furnissii CIP 102972] gi|315180248|gb|ADT87162.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio furnissii NCTC 11218] Length = 342 Score = 348 bits (894), Expect = 5e-94, Method: Composition-based stats. Identities = 169/342 (49%), Positives = 232/342 (67%), Gaps = 4/342 (1%) Query: 2 YKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 S++ S S S L + +GFL CG++TGL GF+ A G+W+G D Sbjct: 4 KLTLLASVVAASTALMANSASAADSTLDKVLSQGFLTCGVSTGLPGFSNPNAKGEWEGID 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V++C+AL++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F Sbjct: 64 VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDSALGLNFVG 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K GISS +L GAS+CVQ+GTTTEL LADYF+ + M Y P+VF+ Sbjct: 124 VNYYDGQGFMVKKDLGISSAKELDGASVCVQSGTTTELNLADYFRNNGMSYKPVVFDTAA 183 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + A RCD T D S LYAL+L ++P V+LP+IISK PL P + Q D +W+N+ Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNV 243 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 WT +AMV AEE GIT KN +++ K + NP+V+R LG+D G+ LG+ DW Y+I+ Sbjct: 244 AKWTLFAMVNAEEYGITSKNADEMLK-SDNPEVKRILGVD--GPKGKGLGIRDDWGYQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 301 KQVGNYGESFERTVGKGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|325275056|ref|ZP_08141044.1| general amino acid ABC transporter, periplasmic binding protein [Pseudomonas sp. TJI-51] gi|324099819|gb|EGB97677.1| general amino acid ABC transporter, periplasmic binding protein [Pseudomonas sp. TJI-51] Length = 342 Score = 348 bits (894), Expect = 5e-94, Method: Composition-based stats. Identities = 158/324 (48%), Positives = 227/324 (70%), Gaps = 2/324 (0%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S + + L +KK+GF++CG++ GL GF+ A G G D D CRA+++A+F D +K+ Sbjct: 21 SNAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIIGIDADVCRAVAAAVFGDANKV 80 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ LNAKERF ALQS ++D+LSRNT WT R+ +GL F +TY+DG GF+++KK G+S Sbjct: 81 KFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFTGVTYYDGVGFLVNKKLGVS 140 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S +L GA+IC+QAGTTTEL ++D+F+A+ +KY PI F+ +E + + RCD T D Sbjct: 141 SAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSDESAKSLESGRCDVLTSDK 200 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S L+A + P+E+V+LP+ ISK PL P + +GD +W++IV WT +AM+ AEE GIT Sbjct: 201 SQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGDEDWFSIVKWTLFAMLNAEEAGITS 260 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 KN+ +K T NPDV R LG D G+ L L KDW +I++ +GNYGE+F++NLG + Sbjct: 261 KNVEAEAKATKNPDVARLLGAD--GEYGKDLKLPKDWVVQIVKQVGNYGEVFEKNLGQGT 318 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 +LKI RG NALW+ GG+ YAPP+R Sbjct: 319 DLKIDRGMNALWNNGGIQYAPPVR 342 >gi|254508781|ref|ZP_05120893.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus 16] gi|219548301|gb|EED25314.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus 16] Length = 342 Score = 348 bits (894), Expect = 5e-94, Method: Composition-based stats. Identities = 165/342 (48%), Positives = 232/342 (67%), Gaps = 4/342 (1%) Query: 2 YKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 S++ F + ++ A S L + K+GF+ CG++TGL GF+ + G+W+G D Sbjct: 4 KLTLLASVVAASTAFMATSASAADSTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGID 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V++C+AL++A+ D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F Sbjct: 64 VEYCQALAAAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+ S +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ Sbjct: 124 VNYYDGQGFMVKKDLGLKSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 183 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + A RCD T D S LYAL+L P+ +LP+IISK PL P + QGD +W+NI Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPASAQVLPEIISKEPLGPVVRQGDDQWFNI 243 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 WT AM+ AEE GI+ KN +++ K + +P+V+R LG+D G+ LG+ DW Y++I Sbjct: 244 AKWTLNAMINAEEYGISSKNADEMLK-SKDPNVKRILGVD--GPKGKGLGIRDDWGYQVI 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 301 KQVGNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|193071524|ref|ZP_03052434.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli E110019] gi|192955161|gb|EDV85654.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli E110019] Length = 341 Score = 348 bits (894), Expect = 5e-94, Method: Composition-based stats. Identities = 157/343 (45%), Positives = 231/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GYYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|91212699|ref|YP_542685.1| putative periplasmic amino-acid ABC transporter binding protein [Escherichia coli UTI89] gi|117625557|ref|YP_858880.1| putative periplasmic amino-acid ABC transporter binding protein [Escherichia coli APEC O1] gi|215488575|ref|YP_002331006.1| predicted periplasmic binding transport protein; periplasmic-binding component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|237705973|ref|ZP_04536454.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|306816388|ref|ZP_07450520.1| putative periplasmic binding transport protein; periplasmic-binding component of ABC superfamily [Escherichia coli NC101] gi|312968401|ref|ZP_07782610.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli 2362-75] gi|331649069|ref|ZP_08350157.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli M605] gi|331659557|ref|ZP_08360499.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA206] gi|91074273|gb|ABE09154.1| putative periplasmic amino-acid ABC transporter binding protein [Escherichia coli UTI89] gi|115514681|gb|ABJ02756.1| putative periplasmic amino-acid ABC transporter binding protein [Escherichia coli APEC O1] gi|215266647|emb|CAS11086.1| predicted periplasmic binding transport protein; periplasmic-binding component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|222034984|emb|CAP77727.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli LF82] gi|226899013|gb|EEH85272.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|294494121|gb|ADE92877.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Escherichia coli IHE3034] gi|305849953|gb|EFM50412.1| putative periplasmic binding transport protein; periplasmic-binding component of ABC superfamily [Escherichia coli NC101] gi|307625131|gb|ADN69435.1| predicted periplasmic binding transport protein; periplasmic-binding component of ABC superfamily [Escherichia coli UM146] gi|312286619|gb|EFR14530.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli 2362-75] gi|312947826|gb|ADR28653.1| predicted periplasmic binding transport protein; periplasmic-binding component of ABC superfamily [Escherichia coli O83:H1 str. NRG 857C] gi|315289024|gb|EFU48422.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 110-3] gi|315300933|gb|EFU60153.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli MS 16-3] gi|320194754|gb|EFW69384.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli WV_060327] gi|323189120|gb|EFZ74404.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia coli RN587/1] gi|323951212|gb|EGB47087.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H252] gi|323957584|gb|EGB53298.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H263] gi|330909319|gb|EGH37833.1| glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli AA86] gi|331042816|gb|EGI14958.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli M605] gi|331054139|gb|EGI26168.1| putative amino-acid ABC transporter-binding protein YhdW [Escherichia coli TA206] Length = 341 Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W + I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAFNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|323498373|ref|ZP_08103373.1| amino acid ABC transporter amino acid-binding protein [Vibrio sinaloensis DSM 21326] gi|323316615|gb|EGA69626.1| amino acid ABC transporter amino acid-binding protein [Vibrio sinaloensis DSM 21326] Length = 342 Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 165/342 (48%), Positives = 233/342 (68%), Gaps = 4/342 (1%) Query: 2 YKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 S++ F + ++ A S L + K+GFL CG++TGL GF+ + G+W+G D Sbjct: 4 KLTLLASVVAASTAFMATSASAADSTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V++C+AL++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F Sbjct: 64 VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+ S ++L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ Sbjct: 124 VNYYDGQGFMVKKDLGLKSATELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 183 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPSSAQVLPEIISKEPLGPVVRQGDDQWFNI 243 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 WT AM+ AEE GI+ KN +++ K + +P+++R LG+D G+ LG+ DW Y++I Sbjct: 244 AKWTLSAMINAEEYGISSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 301 KQVGNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|254439839|ref|ZP_05053333.1| lysine-arginine-ornithine-binding periplasmic protein [Octadecabacter antarcticus 307] gi|198255285|gb|EDY79599.1| lysine-arginine-ornithine-binding periplasmic protein [Octadecabacter antarcticus 307] Length = 338 Score = 348 bits (893), Expect = 6e-94, Method: Composition-based stats. Identities = 153/342 (44%), Positives = 215/342 (62%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L I + + A L D+K RG L CG+ TGLVGFA ANG W+GFD Sbjct: 1 MKNSVLLG--ALTIAGLAAGAAAAGTLDDVKARGTLNCGVTTGLVGFAAPDANGVWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRAL++A+ DP ++++P + RF AL S +ID L+RNT WT R++ L F Sbjct: 59 VGVCRALAAAVLGDPMAVEFVPTTGQTRFTALASGEIDFLARNTTWTFSRDVDLKFEFTG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y+DGQGF++ ++ G+SS L GA++C+Q GTTTEL LADYF+++N+ Y P+ E Sbjct: 119 INYYDGQGFMVPRELGVSSAKDLDGATVCIQTGTTTELNLADYFRSNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T + P +HV+LP+IISK PL P + GD EW ++ Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRATFENPGDHVLLPEIISKEPLGPLVRHGDNEWADV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 WT A++ AEELG+T NI +++ T NP++ R LG + +G LGL DW I Sbjct: 239 ARWTLNALIAAEELGVTSANIAELANGTDNPEINRLLGTE--GELGAMLGLEADWAKNAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F++N+G + + + RG NA+W++GGL+Y+PP R Sbjct: 297 MAGGNYGELFEKNIGENTPIGLARGLNAMWTEGGLIYSPPFR 338 >gi|37679741|ref|NP_934350.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio vulnificus YJ016] gi|37198486|dbj|BAC94321.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio vulnificus YJ016] Length = 375 Score = 348 bits (893), Expect = 6e-94, Method: Composition-based stats. Identities = 165/342 (48%), Positives = 230/342 (67%), Gaps = 4/342 (1%) Query: 2 YKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 S++ +S + S L + K+GFL CG++TGL GF+ + G+W+G D Sbjct: 37 KLTILASLVAASTAMLSSNAFAAESTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 96 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V++C+A+++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F Sbjct: 97 VEYCQAIAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 156 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K GI S +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ Sbjct: 157 VNYYDGQGFMVKKDLGIKSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 216 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + A RCD T D S LYAL+L P+ V+LP+IISK PL P + QGD +W+NI Sbjct: 217 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPNSAVVLPEIISKEPLGPVVRQGDDQWFNI 276 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 WT AM+ AEE GIT KN ++ K + +P+V+R LG+D G+ LG+ DW Y+++ Sbjct: 277 AKWTLNAMINAEEYGITSKNAEEMLK-SNDPNVKRILGVD--GPKGKGLGIRDDWGYQVV 333 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 334 KQVGNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAPPIR 375 >gi|323492614|ref|ZP_08097758.1| amino acid ABC transporter periplasmic amino acid-binding protein [Vibrio brasiliensis LMG 20546] gi|323312989|gb|EGA66109.1| amino acid ABC transporter periplasmic amino acid-binding protein [Vibrio brasiliensis LMG 20546] Length = 342 Score = 348 bits (893), Expect = 6e-94, Method: Composition-based stats. Identities = 167/342 (48%), Positives = 232/342 (67%), Gaps = 4/342 (1%) Query: 2 YKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 S++ ++ + A S L + K+GFL CG++TGL GF+ + G+W+G D Sbjct: 4 KLTLLASVVAASTALMSTSAAAADSTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V++C+AL+SA+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F Sbjct: 64 VEYCQALASAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G++S +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ Sbjct: 124 VNYYDGQGFMVKKDLGLTSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 183 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPSSAQVLPEIISKEPLGPVVRQGDDQWFNI 243 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 WT AMV AEE GIT KN +++ K + +P+++R LG+D G+ LG+ DW Y++I Sbjct: 244 AKWTLAAMVNAEEYGITSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 301 KQVGNYGESFERTVGEGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|303256337|ref|ZP_07342353.1| general amino acid ABC transporter, periplasmic binding protein [Burkholderiales bacterium 1_1_47] gi|302861066|gb|EFL84141.1| general amino acid ABC transporter, periplasmic binding protein [Burkholderiales bacterium 1_1_47] Length = 340 Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats. Identities = 149/342 (43%), Positives = 227/342 (66%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L + L + + +L +K + CG+NT GF+ + G+W G D Sbjct: 1 MNQTILAGALSAVSLSLAAPAFAGPVLDKVKANDVVVCGVNTAAPGFSNADSKGNWTGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRAL++A+ D +K++++PLN+ +RF ALQ+ ++D+L+RNT W L R+ SLG F Sbjct: 61 VDYCRALAAAVLADANKVKFVPLNSPQRFSALQAGEVDVLARNTTWNLTRDASLGAVFVG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+DGQGF++ KK + S QL+GA+ICVQ+GT++E ++ADYFK+H MKY ++F+ E Sbjct: 121 TNYYDGQGFLVPKKLNVKSAKQLNGATICVQSGTSSEPSVADYFKSHGMKYKAVLFDTTE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + RC YT D+S L + P ++VILP++ISK PL P++ +GD EW+ I Sbjct: 181 ATQGAFLSGRCQVYTTDMSDLAGARTKAANPDDYVILPEVISKEPLGPSVRRGDNEWFQI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 W A + AEE GITQ N +++ K +T+P+V+R LG ++G+ LGL KDW+YRI+ Sbjct: 241 ARWVLNAFIEAEEKGITQANADELRKTSTDPNVKRLLG--SGEDMGKLLGLDKDWSYRIV 298 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+RNLG ++ L +PRG N W+ GG++YAPP+R Sbjct: 299 KQVGNYGESFERNLGPKTPLALPRGINNQWTNGGILYAPPVR 340 >gi|302339786|ref|YP_003804992.1| extracellular solute-binding protein family 3 [Spirochaeta smaragdinae DSM 11293] gi|301636971|gb|ADK82398.1| extracellular solute-binding protein family 3 [Spirochaeta smaragdinae DSM 11293] Length = 365 Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats. Identities = 156/354 (44%), Positives = 223/354 (62%), Gaps = 18/354 (5%) Query: 5 FFVSILCLIILFFTSFSTNA----------------SILGDIKKRGFLKCGINTGLVGFA 48 F+++ I L S + S L +K+RG + G+ G+ G++ Sbjct: 14 LFLALFVTIALASCGSSKSEEPAAEESATAAPETGKSTLELVKERGKVIVGVTAGVPGYS 73 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + G W+GFDVD RA+++A+ DP I+ PL+AKERF ALQS +ID+L R T WT Sbjct: 74 APDSEGIWQGFDVDLGRAVAAAVLGDPDAIECRPLSAKERFTALQSGEIDVLVRVTTWTA 133 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R+ LG+ F + Y+DGQGF++ K GI+S++ L GA++ VQ+GTTTEL L+DYF+ +N Sbjct: 134 TRDSQLGVNFAGVNYYDGQGFMVAKDSGITSLADLDGATVAVQSGTTTELNLSDYFRKNN 193 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 M + I FE+ ++ AA A R DA T D S LYAL+ P ++LP++ISK PL P Sbjct: 194 MDFELITFEKNDQASAALEAGRADAVTSDQSQLYALRTKFKEPENFIMLPELISKEPLGP 253 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288 + QGD EW+NIV WT +AM+ AEE GIT N++++ + + NP+V+R LG + + E Sbjct: 254 VVRQGDDEWFNIVKWTLFAMLNAEEYGITSDNVDEMKETSDNPNVKRLLGSE--GGVWEG 311 Query: 289 LGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GL + Y II+++GNYGE F+RNLG+ S L I RG NALW+KGG+ Y PIR Sbjct: 312 FGLESNAGYNIIKYIGNYGESFERNLGSGSPLNISRGLNALWTKGGIQYGMPIR 365 >gi|110807125|ref|YP_690645.1| putative periplasmic binding transport protein [Shigella flexneri 5 str. 8401] gi|110616673|gb|ABF05340.1| putative periplasmic binding transport protein [Shigella flexneri 5 str. 8401] Length = 341 Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 231/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A L ++K+GF++CGI+ GL F+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPRFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|107103377|ref|ZP_01367295.1| hypothetical protein PaerPA_01004447 [Pseudomonas aeruginosa PACS2] Length = 338 Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats. Identities = 157/342 (45%), Positives = 237/342 (69%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +L + L ++ + + L +K++G+++CG++ GL GF+ A G +KG D Sbjct: 1 MKGTWL--LLAAVCLGASATAEAGATLDAVKRKGYVQCGVSDGLPGFSYADAKGRFKGLD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRAL++A+F D K+++ PL+A ERF ALQS +D+LSRNT WT R+ +LG+ F Sbjct: 59 VDICRALAAALFGDAEKVRFTPLSATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TYFDGQGF++++K G+SS +L A++C+Q+GTT EL +ADYF+AH ++Y ++ + E Sbjct: 119 VTYFDGQGFLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYE 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A +CD + D S LYA +L +P ++V+LP++ISK PL PA+ QGD W+NI Sbjct: 179 KSARALEAGQCDVLSSDQSQLYAQRLKLAKPEQYVVLPEVISKEPLGPAVRQGDEAWFNI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT Y ++ AEELG+T N+ + ++D+ NPDV R LG + + G+ L L +DW +++ Sbjct: 239 VRWTLYGLLNAEELGVTSSNVERQARDSRNPDVARLLGSE--GDAGKDLQLPRDWVVQMV 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL YAPPIR Sbjct: 297 RQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 338 >gi|163760315|ref|ZP_02167398.1| ABC transporter, amino acid binding protein [Hoeflea phototrophica DFL-43] gi|162282714|gb|EDQ33002.1| ABC transporter, amino acid binding protein [Hoeflea phototrophica DFL-43] Length = 340 Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats. Identities = 169/317 (53%), Positives = 238/317 (75%), Gaps = 3/317 (0%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L D+K +GF++CG++TGL GF+ G+W G DVD CR +++A+F D S +++ PL+A Sbjct: 27 TLDDVKAKGFVQCGVSTGLAGFSAPNDAGEWSGIDVDLCRGVAAAVFGDASAVKFSPLSA 86 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 KERF ALQS +ID+LSRNT WT+ R+ LGL F + Y+DGQGF++ K G++S QLSG Sbjct: 87 KERFTALQSGEIDVLSRNTTWTMSRDTQLGLNFAGVNYYDGQGFMVRKSLGVTSALQLSG 146 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 AS+CVQ GTTTEL L DYFKA++M Y+P+VFE++EE++AAY A+RCD YT D S LY+++ Sbjct: 147 ASVCVQTGTTTELNLTDYFKANDMTYNPVVFEKLEEVNAAYDANRCDVYTTDQSGLYSIR 206 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 L P EH++LP++ISK PL P + QGD +W+NIV W H AM+ AEE+GIT N+++++ Sbjct: 207 LGLSAPDEHMVLPEVISKEPLGPVVRQGDDQWFNIVKWVHNAMLNAEEMGITSANVDEMA 266 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 + +P+V R LG + GE +G++ DW Y++++ +GNYGE+F+RN+G + L I RG Sbjct: 267 A-SADPNVMRLLGKE--GTFGEGIGVSNDWAYQVVKQVGNYGEVFERNVGASTPLAIDRG 323 Query: 326 YNALWSKGGLMYAPPIR 342 NALWSKGGL YAPPIR Sbjct: 324 VNALWSKGGLQYAPPIR 340 >gi|17988694|ref|NP_541327.1| general L-amino acid-binding periplasmic protein AAPJ precursor [Brucella melitensis bv. 1 str. 16M] gi|17984503|gb|AAL53591.1| general l-amino acid-binding periplasmic protein aapj precursor [Brucella melitensis bv. 1 str. 16M] Length = 331 Score = 348 bits (892), Expect = 8e-94, Method: Composition-based stats. Identities = 164/334 (49%), Positives = 223/334 (66%), Gaps = 3/334 (0%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L A L +K+RG + CG++ G+ GF+ G W GFD+DFCRA+S Sbjct: 1 MLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFDIDFCRAVS 60 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +A+F DP K+ ++PL+ KERF ALQS +D+LSR T WTL R+ +G+ F Y+DGQG Sbjct: 61 AAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVGTAYYDGQG 120 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 F++ K G+ S +L GASIC + GTTTE +ADYF AHN+KY P+V + + I A+ Sbjct: 121 FMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSADGILKAFET 180 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 RCD YT D SALYA +L P +++LP++ISK PL PA+ QGD +W+NIV WT +A+ Sbjct: 181 GRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNIVRWTLFAL 240 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 + AEELGITQK + D+ PD++RFLG + + G+ LGL W Y I+ +GNYGE Sbjct: 241 LEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIVASVGNYGE 297 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 MF+R +G S LKI RG NALW+KGGLMYAPP++ Sbjct: 298 MFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 331 >gi|254504317|ref|ZP_05116468.1| hypothetical protein SADFL11_4356 [Labrenzia alexandrii DFL-11] gi|222440388|gb|EEE47067.1| hypothetical protein SADFL11_4356 [Labrenzia alexandrii DFL-11] Length = 338 Score = 348 bits (892), Expect = 8e-94, Method: Composition-based stats. Identities = 156/340 (45%), Positives = 228/340 (67%), Gaps = 3/340 (0%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K+ F S+ +F +AS L +K+ G+ CG++ G GF+ ++G+W G DVD Sbjct: 2 KNTFKSLAVAAAFSGAAFPASASTLERVKENGYFTCGVSQGNPGFSNPDSDGNWSGLDVD 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +CRA+++A+ DP+ +++ PL++ ERF ALQS +ID+LSR T WT+ R+ +LG F + Sbjct: 62 YCRAIAAAVLGDPAAVKFRPLSSPERFTALQSGEIDVLSRTTTWTMSRDTNLGANFAGVM 121 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQ ++ K+ GI+S +L+GAS+C GTTTEL +AD+F+ +NM+Y + FE+ +E+ Sbjct: 122 YYDGQAMMVRKELGITSAMELAGASVCTATGTTTELNVADFFRVNNMEYEVVAFEKNDEV 181 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 AY A RCD YT D S L+A +L PSEH+ILP++ISK PL P + QGD +W NI Sbjct: 182 TQAYDAGRCDVYTTDKSGLHANRLKLTNPSEHMILPEVISKEPLGPVVRQGDDQWLNIAK 241 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 WT ++ AEELG+TQ N+ + + + NP V+R +G++ N G ALGL +DW RII Sbjct: 242 WTLNVLINAEELGVTQANVADM-ESSDNPAVKRLIGVE--GNFGGALGLDQDWAVRIISA 298 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F RN+G + L I RG NA W GG +YAPP+R Sbjct: 299 VGNYGEIFVRNVGVDTPLGIERGLNASWIDGGTLYAPPVR 338 >gi|126461167|ref|YP_001042281.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodobacter sphaeroides ATCC 17029] gi|126102831|gb|ABN75509.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodobacter sphaeroides ATCC 17029] Length = 338 Score = 348 bits (892), Expect = 9e-94, Method: Composition-based stats. Identities = 149/342 (43%), Positives = 219/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + + +A+ L D+K RG L CG++TGL GF+ ANG+W GFD Sbjct: 1 MTKSVFLG--TLTVAGLAAGLASAATLDDVKARGELNCGVSTGLTGFSLPDANGNWTGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D +K++++P + RF AL S ++D+L+RN+ WT R+ L L F Sbjct: 59 VSLCRAVAAAVLGDGTKVKFVPTTGQTRFTALASGEVDMLARNSTWTFSRDTDLKLDFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G++S +L GA++C+Q GTTTEL LAD+FK +N+ Y P+ E Sbjct: 119 VNYYDGQGFMVRKDLGVTSAKELDGATVCIQTGTTTELNLADWFKVNNLSYTPVAVETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + Y A CDAYT D S L A + P H+ILP+IISK PL PA+ GD EW +I Sbjct: 179 EGEQQYAAGACDAYTTDASGLAATRAAFADPENHIILPEIISKEPLGPAVRHGDNEWADI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++ AEE G+T N+ +++ ++ NP++QR LG+ ++G+ + L DW R I Sbjct: 239 VRWTLNALIAAEEYGVTSANMEELAANSPNPEIQRVLGV--QGDLGKMIRLDNDWAKRAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +G + + + RG NA W++GGL+YAPP R Sbjct: 297 AVGGNYGEIFAATIGEATPIGLARGLNAQWTQGGLLYAPPFR 338 >gi|15599053|ref|NP_252547.1| amino acid-binding protein [Pseudomonas aeruginosa PAO1] gi|218889858|ref|YP_002438722.1| putative amino acid-binding protein [Pseudomonas aeruginosa LESB58] gi|254236763|ref|ZP_04930086.1| hypothetical protein PACG_02773 [Pseudomonas aeruginosa C3719] gi|254242550|ref|ZP_04935872.1| hypothetical protein PA2G_03302 [Pseudomonas aeruginosa 2192] gi|9950036|gb|AAG07245.1|AE004803_1 probable amino acid-binding protein [Pseudomonas aeruginosa PAO1] gi|126168694|gb|EAZ54205.1| hypothetical protein PACG_02773 [Pseudomonas aeruginosa C3719] gi|126195928|gb|EAZ59991.1| hypothetical protein PA2G_03302 [Pseudomonas aeruginosa 2192] gi|218770081|emb|CAW25843.1| probable amino acid-binding protein [Pseudomonas aeruginosa LESB58] Length = 341 Score = 348 bits (892), Expect = 9e-94, Method: Composition-based stats. Identities = 157/342 (45%), Positives = 237/342 (69%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +L + L ++ + + L +K++G+++CG++ GL GF+ A G +KG D Sbjct: 4 MKGTWL--LLAAVCLGASATAEAGATLDAVKRKGYVQCGVSDGLPGFSYADAKGRFKGLD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRAL++A+F D K+++ PL+A ERF ALQS +D+LSRNT WT R+ +LG+ F Sbjct: 62 VDICRALAAALFGDAEKVRFTPLSATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTG 121 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TYFDGQGF++++K G+SS +L A++C+Q+GTT EL +ADYF+AH ++Y ++ + E Sbjct: 122 VTYFDGQGFLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYE 181 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A +CD + D S LYA +L +P ++V+LP++ISK PL PA+ QGD W+NI Sbjct: 182 KSARALEAGQCDVLSSDQSQLYAQRLKLAKPEQYVVLPEVISKEPLGPAVRQGDEAWFNI 241 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT Y ++ AEELG+T N+ + ++D+ NPDV R LG + + G+ L L +DW +++ Sbjct: 242 VRWTLYGLLNAEELGVTSSNVERQARDSRNPDVARLLGSE--GDAGKDLQLPRDWVVQMV 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL YAPPIR Sbjct: 300 RQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 341 >gi|27365994|ref|NP_761522.1| amino acid ABC transporter periplasmic amino acid-binding protein [Vibrio vulnificus CMCP6] gi|320156509|ref|YP_004188888.1| glutamate aspartate periplasmic binding protein GltI [Vibrio vulnificus MO6-24/O] gi|27362194|gb|AAO11049.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio vulnificus CMCP6] gi|319931821|gb|ADV86685.1| glutamate Aspartate periplasmic binding protein precursor GltI [Vibrio vulnificus MO6-24/O] Length = 342 Score = 348 bits (892), Expect = 9e-94, Method: Composition-based stats. Identities = 165/342 (48%), Positives = 230/342 (67%), Gaps = 4/342 (1%) Query: 2 YKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 S++ +S + S L + K+GFL CG++TGL GF+ + G+W+G D Sbjct: 4 KLTILASLVAASTAMLSSNAFAAESTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V++C+A+++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F Sbjct: 64 VEYCQAIAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K GI S +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ Sbjct: 124 VNYYDGQGFMVKKDLGIKSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 183 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + A RCD T D S LYAL+L P+ V+LP+IISK PL P + QGD +W+NI Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPNSAVVLPEIISKEPLGPVVRQGDDQWFNI 243 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 WT AM+ AEE GIT KN ++ K + +P+V+R LG+D G+ LG+ DW Y+++ Sbjct: 244 AKWTLNAMINAEEYGITSKNAEEMLK-SNDPNVKRILGVD--GPKGKGLGIRDDWGYQVV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 301 KQVGNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|313109278|ref|ZP_07795246.1| Putative amino-acid ABC transporter binding protein [Pseudomonas aeruginosa 39016] gi|310881748|gb|EFQ40342.1| Putative amino-acid ABC transporter binding protein [Pseudomonas aeruginosa 39016] Length = 341 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 157/342 (45%), Positives = 237/342 (69%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +L + L ++ + + L +K++G+++CG++ GL GF+ A G +KG D Sbjct: 4 MKGTWL--LLAAVCLGASATAEAGATLDAVKRKGYVQCGVSDGLPGFSYADAKGRFKGLD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRAL++A+F D K+++ PL+A ERF ALQS +D+LSRNT WT R+ +LG+ F Sbjct: 62 VDICRALAAALFGDAEKVRFTPLSATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTG 121 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TYFDGQGF++++K G+SS +L A++C+Q+GTT EL +ADYF+AH ++Y ++ + E Sbjct: 122 VTYFDGQGFLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYE 181 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A +CD + D S LYA +L +P ++V+LP++ISK PL PA+ QGD W+NI Sbjct: 182 KSARALEAGQCDVLSSDQSQLYAQRLKLAKPDQYVVLPEVISKEPLGPAVRQGDEAWFNI 241 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT Y ++ AEELG+T N+ + ++D+ NPDV R LG + + G+ L L +DW +++ Sbjct: 242 VRWTLYGLLNAEELGVTSSNVERQARDSRNPDVARLLGSE--GDAGKDLQLPRDWVVQMV 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL YAPPIR Sbjct: 300 RQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 341 >gi|163859070|ref|YP_001633368.1| putative extracellular solute-binding protein [Bordetella petrii DSM 12804] gi|163262798|emb|CAP45101.1| putative extracellular solute-binding protein [Bordetella petrii] Length = 338 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 152/343 (44%), Positives = 226/343 (65%), Gaps = 6/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M S++ +L A+ L ++KRG L+CG TG GF+ A G W+G D Sbjct: 1 MK--IARSLIGATLLLGAMAGAQAATLDVVQKRGELRCGTTTGFAGFSAPDAQGVWRGLD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A+F D +KI+ +PLN+++RF ALQS +ID+L+RNT T R+ +LG+ Sbjct: 59 VDLCRAVAAAVFGDANKIKIVPLNSQQRFTALQSGEIDVLTRNTTVTQQRDTALGIIHAG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I ++DGQGF++ K G+ S ++L+GA+IC+Q GT+ E TLAD+ +AHN+ Y P+V E Sbjct: 119 INFYDGQGFLVPKSLGVQSATELNGATICLQTGTSNENTLADWARAHNVSYKPVVIETFN 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ A+ + RCD ++ D S L +++ P ++++LP+IISK PL P + QGD W N Sbjct: 179 EVVNAFASGRCDVFSTDASGLASIRISKLQNPDDYLVLPEIISKEPLGPFVRQGDDAWLN 238 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 +V W+ AM+ AEE GIT N++Q + + NP+++R LG+ + G +GL + W Y I Sbjct: 239 VVHWSLSAMIEAEEYGITSANVDQQLQ-SANPNIRRMLGV--TPGAGANMGLDEKWAYNI 295 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNYGE F+RN+G S LKI RG NA W++GGLMYA PIR Sbjct: 296 IKQVGNYGESFERNVGAGSPLKIKRGLNAQWTQGGLMYALPIR 338 >gi|116051889|ref|YP_789268.1| putative amino acid-binding protein [Pseudomonas aeruginosa UCBPP-PA14] gi|115587110|gb|ABJ13125.1| Putative amino-acid ABC transporter binding protei [Pseudomonas aeruginosa UCBPP-PA14] Length = 341 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 157/342 (45%), Positives = 236/342 (69%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +L + L ++ + + L +K++G+++CG++ GL GF+ A G +KG D Sbjct: 4 MKGTWL--LLAAVCLGASATAEAGATLDAVKRKGYVQCGVSDGLPGFSYADAKGRFKGLD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRAL++A+F D K+++ PL A ERF ALQS +D+LSRNT WT R+ +LG+ F Sbjct: 62 VDICRALAAALFGDAEKVRFTPLPATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTG 121 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TYFDGQGF++++K G+SS +L A++C+Q+GTT EL +ADYF+AH ++Y ++ + E Sbjct: 122 VTYFDGQGFLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYE 181 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A +CD + D S LYA +L +P ++V+LP++ISK PL PA+ QGD W+NI Sbjct: 182 KSARALEAGQCDVLSSDQSQLYAQRLKLAKPDQYVVLPEVISKEPLGPAVRQGDEAWFNI 241 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT Y ++ AEELG+T N+ + ++D+ NPDV R LG + + G+ L L +DW +++ Sbjct: 242 VRWTLYGLLNAEELGVTSSNVERQARDSRNPDVARLLGSE--GDAGKDLQLPRDWVVQMV 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL YAPPIR Sbjct: 300 RQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 341 >gi|307300514|ref|ZP_07580294.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] gi|307318379|ref|ZP_07597814.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] gi|306896061|gb|EFN26812.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] gi|306904680|gb|EFN35264.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] Length = 336 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 155/342 (45%), Positives = 229/342 (66%), Gaps = 6/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + T+ + L +K+RG L+CG++ G++GF+ G+W GFD Sbjct: 1 MKTGILALFATAFLAGTTAQAA---TLDVVKQRGELRCGVSQGVLGFSAPDDKGEWSGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DFCRA+++A P K++Y+PL+ KERF ALQS ++D+LSR T WTL R+ LG++F Sbjct: 58 IDFCRAVAAATLGSPDKVKYVPLSTKERFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVG 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQ F++ G+ SV +LSGAS+C + GTTTE +ADYF A+ ++Y I FE+ + Sbjct: 118 VNYYDGQAFMVRGDIGVKSVKELSGASVCTETGTTTEQNMADYFSANKIEYQVIAFEKAD 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A+ + RCD Y+ D SALY+ +LT + P V+LP++ISK PL PA+ QGD +W+ + Sbjct: 178 QTIQAFNSGRCDVYSTDASALYSQRLTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKV 237 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEELGIT++N + + T +RFLGID + G+ALGL W Y+ + Sbjct: 238 VRWTLFAMIEAEELGITRENAASLLESGTAAQ-KRFLGIDNEA--GKALGLDPKWAYQTV 294 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F+R+LG +S L+I RG N LW+ GGL+YAPP+R Sbjct: 295 AAVGNYGEIFERHLGKESALRIDRGLNKLWNNGGLIYAPPVR 336 >gi|238752136|ref|ZP_04613618.1| Extracellular solute-binding protein, family 3 [Yersinia rohdei ATCC 43380] gi|238709609|gb|EEQ01845.1| Extracellular solute-binding protein, family 3 [Yersinia rohdei ATCC 43380] Length = 341 Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats. Identities = 159/343 (46%), Positives = 230/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ L + +A L +KK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA+++AIF D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G+ F Sbjct: 61 DVDICRAVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P+E ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPTEFIVLPEVISKEPLGPVVRRGDEDWFA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 +V WT +AM+ AEE+G+T +N+ ++ T PD+ LG + N G+ L + DW +I Sbjct: 241 LVRWTLFAMLNAEEMGVTSQNVEALAAKPTTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE F+RN+G SELKI RG NALW+ GGL YAPP+R Sbjct: 299 VKQVGNYGESFERNVGMGSELKIKRGQNALWNNGGLQYAPPVR 341 >gi|153835228|ref|ZP_01987895.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio harveyi HY01] gi|148868294|gb|EDL67426.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio harveyi HY01] Length = 342 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 165/342 (48%), Positives = 231/342 (67%), Gaps = 4/342 (1%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 S++ + + A L + K+GF+ CG++TGL GF+ + G+W+G D Sbjct: 4 KLTVLASVVAASTAMMATSAQAADTTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGID 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V++C+AL++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F Sbjct: 64 VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+SS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ Sbjct: 124 VNYYDGQGFMVKKDLGVSSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAA 183 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLKDPSSATVLPEIISKEPLGPVVRQGDDQWFNI 243 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 WT +AMV AEE GI+ KN +++ K + +P+++R LG+D G+ LG+ DW Y++I Sbjct: 244 AKWTLFAMVNAEEYGISSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+R +G S LKI RG NALW+ GG MYAPPIR Sbjct: 301 KQVGNYGESFERTVGTGSPLKISRGVNALWNAGGFMYAPPIR 342 >gi|89901102|ref|YP_523573.1| extracellular solute-binding protein [Rhodoferax ferrireducens T118] gi|89345839|gb|ABD70042.1| extracellular solute-binding protein, family 3 [Rhodoferax ferrireducens T118] Length = 344 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 160/342 (46%), Positives = 219/342 (64%), Gaps = 3/342 (0%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +++ + F ++ + L IK RG + CG+NTGL GF + G W G DV Sbjct: 5 KLQTLTAVVATVGAFMSAPAHAGKTLDGIKARGQVVCGVNTGLAGFGAADSAGKWTGLDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D CRA+++A D KI+Y+PLNA++RF ALQS ++D+LSRNT +TL R+ SLGL + Sbjct: 65 DVCRAIAAATLGDAEKIKYVPLNAQQRFTALQSGEVDVLSRNTTFTLTRDASLGLHDTAV 124 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 TY+DGQGF++ K I S QL G ++CVQ+GTTTE L DY KA+ + P+VFE++E Sbjct: 125 TYYDGQGFMVPVKSKIKSAKQLKGQTVCVQSGTTTEKNLTDYSKANGLNIKPVVFEKLEA 184 Query: 182 IDAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + AY RC AYT D S L + + P EH+ILP++ISK PL P + +GD EW+ I Sbjct: 185 AENAYFTGRCIAYTTDASGLASTRNKVAKDPKEHIILPELISKEPLGPMVRRGDDEWFAI 244 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W Y ++ AEE GITQ N+ + + +P VQR LG S + G+ LGL+KDW I Sbjct: 245 VKWVIYGLLEAEEYGITQANLEGLKATSKDPVVQRILGT--SEDSGKLLGLSKDWMANAI 302 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + GNYGE+F+RN+G S L +PRG N W+KGGLMYA P+R Sbjct: 303 KATGNYGEIFERNVGPNSPLGLPRGVNNQWNKGGLMYAYPVR 344 >gi|330862829|emb|CBX72970.1| putative amino-acid ABC transporter-binding protein yhdW [Yersinia enterocolitica W22703] Length = 341 Score = 347 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 161/343 (46%), Positives = 229/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ L + +A L +KK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++AIF D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G+ F Sbjct: 61 DVDICRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P E ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+T KN+ +++ T PD+ LG + N G+ L + DW +I Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEELAAKPTTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE FDRN+G SELKI RG NALW+ GGL YAPP+R Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNNGGLQYAPPVR 341 >gi|254451978|ref|ZP_05065415.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Octadecabacter antarcticus 238] gi|198266384|gb|EDY90654.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Octadecabacter antarcticus 238] Length = 338 Score = 347 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 154/342 (45%), Positives = 213/342 (62%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L I + + A L D+K RG L CG+ TGLVGFA ANG W+GFD Sbjct: 1 MKNSVLLG--ALTIAGLAAGAAAAGTLDDVKARGTLNCGVTTGLVGFAAPDANGVWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRAL++A+ DP ++++P + RF AL S +ID L+RNT WT R++ L F Sbjct: 59 VGLCRALAAAVLGDPMAVEFVPTTGQTRFTALASGEIDFLARNTTWTFSRDVDLKFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y+DGQGF++ + G+SS L GA++C+Q GTTTEL LADYF+++N+ Y P+ E Sbjct: 119 INYYDGQGFMVPRALGVSSAKDLDGATVCIQTGTTTELNLADYFRSNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T + P +HV+LP+IISK PL P + GD EW ++ Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRATFENPGDHVLLPEIISKEPLGPLVRHGDNEWADV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 WT A++ AEELG+T NI +++ T NP++ R LG + +G LGL DW + I Sbjct: 239 ARWTLNALIAAEELGVTSANIAEMASGTDNPEINRLLGSE--GELGAMLGLESDWAMKAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F++N+G + + + RG NALW+ GGL+Y PP R Sbjct: 297 MAGGNYGELFEKNIGENTPIGLARGLNALWTDGGLVYTPPFR 338 >gi|262394189|ref|YP_003286043.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. Ex25] gi|262337783|gb|ACY51578.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. Ex25] Length = 342 Score = 347 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 165/342 (48%), Positives = 230/342 (67%), Gaps = 4/342 (1%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 S++ + + A L + K+GFL CG++TGL GF+ + G+W+G D Sbjct: 4 KLTVLASVVAASTAMMATSAQAADTTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V++C+AL++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F Sbjct: 64 VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K GISS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ Sbjct: 124 VNYYDGQGFMVKKDLGISSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 183 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQWFNI 243 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 WT AM+ AEE GI+ KN +++ K + +P+++R LG+D G+ LG+ DW Y++I Sbjct: 244 AKWTLSAMINAEEYGISSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 301 KQVGNYGESFERTVGTGSPLEISRGVNALWNAGGFMYAPPIR 342 >gi|261252934|ref|ZP_05945507.1| amino acid ABC transporter amino acid-binding protein [Vibrio orientalis CIP 102891] gi|260936325|gb|EEX92314.1| amino acid ABC transporter amino acid-binding protein [Vibrio orientalis CIP 102891] Length = 342 Score = 347 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 166/342 (48%), Positives = 231/342 (67%), Gaps = 4/342 (1%) Query: 2 YKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 S++ L TS S S L + K+GF+ CG++TGL GF+ + G+W+G D Sbjct: 4 KLTLLASVVAASTALMSTSASAADSTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGID 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V++C+ L++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F Sbjct: 64 VEYCQGLAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G++S +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ Sbjct: 124 VNYYDGQGFMVKKDLGLTSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 183 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPSSAQVLPEIISKEPLGPVVRQGDDQWFNI 243 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 WT AMV AEE GI+ KN +++ K + +P+++R LG+D G+ LG+ DW Y++I Sbjct: 244 AKWTLAAMVNAEEYGISSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 301 KQVGNYGESFERTVGEGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|118589034|ref|ZP_01546441.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Stappia aggregata IAM 12614] gi|118438363|gb|EAV44997.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Stappia aggregata IAM 12614] Length = 326 Score = 347 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 165/316 (52%), Positives = 229/316 (72%), Gaps = 3/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K +GF++CG++ GL GF+ A G+W G DVD+CRA+++A+F D S ++Y PL+AK Sbjct: 14 LEDVKAKGFIQCGVSQGLPGFSNPDAQGNWTGIDVDYCRAMAAAVFGDASAVKYTPLSAK 73 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 ERF ALQS ++D+LSRNT WT+ R+ LGL F + Y+DGQGF++ K G++S +LSGA Sbjct: 74 ERFTALQSGEVDVLSRNTTWTMSRDTQLGLNFAGVNYYDGQGFMVRKDLGVTSALELSGA 133 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 S+C GTTTEL +ADYF+A+NM Y + FE+ +E+ AAY A RCD YT D S LYA +L Sbjct: 134 SVCTNTGTTTELNVADYFRANNMPYEIVAFEKADEVVAAYDAGRCDVYTTDASGLYAQRL 193 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 P +H++LP+IISK PL P + QGD EW+NI WT AM+ AEELG+T +N++++ K Sbjct: 194 KLTNPGDHMVLPEIISKEPLGPVVRQGDDEWFNIAKWTLNAMLNAEELGVTSENVDEM-K 252 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 + NP ++R LG++ GEA+GL DW Y II+++GNY E F+ N+G + L I RG Sbjct: 253 SSDNPSIKRLLGVE--GAFGEAIGLPNDWAYAIIKNVGNYEESFNANVGPDTPLGISRGV 310 Query: 327 NALWSKGGLMYAPPIR 342 NALW+ GG MYAPP+R Sbjct: 311 NALWNDGGFMYAPPVR 326 >gi|156974643|ref|YP_001445550.1| hypothetical protein VIBHAR_02361 [Vibrio harveyi ATCC BAA-1116] gi|156526237|gb|ABU71323.1| hypothetical protein VIBHAR_02361 [Vibrio harveyi ATCC BAA-1116] Length = 350 Score = 347 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 165/342 (48%), Positives = 231/342 (67%), Gaps = 4/342 (1%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 S++ + + A L + K+GF+ CG++TGL GF+ + G+W+G D Sbjct: 12 KLTVLASVVAASTAMMATSAQAADTTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGID 71 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V++C+AL++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F Sbjct: 72 VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 131 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+SS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ Sbjct: 132 VNYYDGQGFMVKKDLGVSSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAA 191 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI Sbjct: 192 QTSKGFDAGRCDILTTDQSGLYALRLNLKDPSSATVLPEIISKEPLGPVVRQGDDQWFNI 251 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 WT +AMV AEE GI+ KN +++ K + +P+++R LG+D G+ LG+ DW Y++I Sbjct: 252 AKWTLFAMVNAEEYGISSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 308 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+R +G S LKI RG NALW+ GG MYAPPIR Sbjct: 309 KQVGNYGESFERTVGTGSPLKISRGVNALWNAGGFMYAPPIR 350 >gi|75906963|ref|YP_321259.1| extracellular solute-binding protein [Anabaena variabilis ATCC 29413] gi|75700688|gb|ABA20364.1| L-glutamate-binding protein / L-aspartate-binding protein / neutral amino acid-binding protein [Anabaena variabilis ATCC 29413] Length = 356 Score = 346 bits (888), Expect = 2e-93, Method: Composition-based stats. Identities = 157/357 (43%), Positives = 224/357 (62%), Gaps = 18/357 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG---------------DIKKRGFLKCGINTGLV 45 M K + LI +A IK RG L CG++ + Sbjct: 3 MNKLVIILGASLIFTTTACGGDSAPTTDASTNSGGTLVANRWNTIKNRGQLICGVSGEVP 62 Query: 46 GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 GF+ V NG++ G DVD CRA+++A+FD+P +++ L+AKERF ALQ+ ++DILSRNT Sbjct: 63 GFSFVGTNGEYSGIDVDVCRAIAAALFDNPDAVEFRNLSAKERFTALQTGEVDILSRNTT 122 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 WTL R S+GL F P+ ++DGQ ++ K I S++ L +ICVQ GTTTE LAD + Sbjct: 123 WTLSRATSVGLEFAPVVFYDGQAIMVRKNSAIKSLADLKDKAICVQTGTTTEQNLADQMR 182 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 N+ Y P+VFE V A Y RCDA T D SAL + + T +P ++V+L ++IS P Sbjct: 183 KRNITYKPVVFEDVNVTFATYAEGRCDAITADRSALVSRRTTLPKPEDNVVLDEVISSEP 242 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285 LAPA+ +GD +W + V+W YA++ EELGI +N+ Q + +PDV+RFLG + ++ Sbjct: 243 LAPAVAKGDAKWSDTVNWVVYALIKGEELGINSQNLGQF-TTSNDPDVKRFLGTE--GDL 299 Query: 286 GEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 G+ LGLT D+ RII+H+GNYGE++DRNLG +++L + RG N LWSKGGL+Y+PP R Sbjct: 300 GQGLGLTNDFAARIIKHVGNYGELYDRNLGPKTKLNLARGQNQLWSKGGLLYSPPFR 356 >gi|332163168|ref|YP_004299745.1| ABC transporter periplasmic solute-binding protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318603946|emb|CBY25444.1| glutamate Aspartate periplasmic binding protein precursor GltI [Yersinia enterocolitica subsp. palearctica Y11] gi|325667398|gb|ADZ44042.1| ABC transporter periplasmic solute-binding protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 341 Score = 346 bits (888), Expect = 2e-93, Method: Composition-based stats. Identities = 161/343 (46%), Positives = 229/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ L + +A L +KK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++AIF D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G+ F Sbjct: 61 DVDICRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P E ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+T KN+ +++ T PD+ LG + N G+ L + DW +I Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEELAAKPTTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE FDRN+G SELKI RG NALW+ GGL YAPP+R Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNNGGLQYAPPVR 341 >gi|67922406|ref|ZP_00515917.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] gi|67855750|gb|EAM50998.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] Length = 350 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 142/355 (40%), Positives = 225/355 (63%), Gaps = 18/355 (5%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVGFA 48 M+ K +F+ I L+ + T+ + L IK+RG L CG+N + GF+ Sbjct: 1 MFNKPYFILIALLLTMPLTACGGGSQTSDNPTPTSSSRLDTIKQRGTLICGVNGEVPGFS 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V NG + G DVD CRA+++A+FDDP K++Y L+A+ERF A+QS ++D+L+RNT WT+ Sbjct: 61 FVDENGQYSGLDVDVCRAIAAALFDDPEKVEYRKLSAQERFPAVQSGEVDVLNRNTTWTI 120 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R+ + G+ F P ++DGQG ++ G++ + L+G SICV AGTTTE LAD + Sbjct: 121 SRDTTNGMEFAPTIFYDGQGIMVTTASGVTDIQGLAGKSICVLAGTTTEQNLADQMRKKG 180 Query: 169 M-KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + Y+P+ F+ V+ + AAY+ RC+ T D S L A + ++H IL ++SK PL Sbjct: 181 ITDYNPVTFDDVDALYAAYQQGRCEGVTADRSQLVARRSILPNSNDHNILNVVLSKEPLG 240 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGE 287 PA+ D++W++ V W ++++ AEE GI +N+ K + +P+++RFLG+D +GE Sbjct: 241 PAVKNNDSDWFDAVKWITFSLIQAEEFGINSENLATFEK-SEDPNIRRFLGLDD--KLGE 297 Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GL D+ R+++H+GNYGE++DRN+G L + RG N LW++GGL+Y+PP R Sbjct: 298 GIGLPNDFASRVVKHVGNYGEVYDRNIGK--PLGLERGPNQLWTEGGLLYSPPFR 350 >gi|269968795|ref|ZP_06182784.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio alginolyticus 40B] gi|269826607|gb|EEZ80952.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio alginolyticus 40B] Length = 350 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 166/342 (48%), Positives = 232/342 (67%), Gaps = 4/342 (1%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 S++ + + A L + K+GFL CG++TGL GF+ + G+W+G D Sbjct: 12 KLTVLASVVAASTAMMATSAQAADTTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 71 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V++C+AL++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F Sbjct: 72 VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 131 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ GISS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ Sbjct: 132 VNYYDGQGFMVKKELGISSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAA 191 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI Sbjct: 192 QTSKGFDAGRCDVLTTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQWFNI 251 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 WT AM+ AEE GI+ KN +++ K +T+P+++R LG+D G+ LG+ DW Y++I Sbjct: 252 AKWTLSAMINAEEYGISSKNADEMLK-STDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 308 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 309 KQVGNYGESFERTVGTGSPLEISRGVNALWNAGGFMYAPPIR 350 >gi|91227965|ref|ZP_01262075.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio alginolyticus 12G01] gi|91188286|gb|EAS74584.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio alginolyticus 12G01] Length = 342 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 166/342 (48%), Positives = 232/342 (67%), Gaps = 4/342 (1%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 S++ + + A L + K+GFL CG++TGL GF+ + G+W+G D Sbjct: 4 KLTVLASVVAASTAMMATSAQAADTTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V++C+AL++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F Sbjct: 64 VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ GISS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ Sbjct: 124 VNYYDGQGFMVKKELGISSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAA 183 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQWFNI 243 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 WT AM+ AEE GI+ KN +++ K +T+P+++R LG+D G+ LG+ DW Y++I Sbjct: 244 AKWTLSAMINAEEYGISSKNADEMLK-STDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 301 KQVGNYGESFERTVGTGSPLEISRGVNALWNAGGFMYAPPIR 342 >gi|317401305|gb|EFV81945.1| amino acid-binding periplasmic protein [Achromobacter xylosoxidans C54] Length = 338 Score = 346 bits (887), Expect = 3e-93, Method: Composition-based stats. Identities = 147/340 (43%), Positives = 226/340 (66%), Gaps = 4/340 (1%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + ++ +L + A+ L +++RG + CG TG GF+ A G W+G DVD Sbjct: 2 NIAKGLVGAALLLAVAQGAQAATLDVVRQRGAVACGTTTGFAGFSAPDAQGKWQGLDVDL 61 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 CRA+++A+F D +KI+ +PLN+++RF ALQS ++D+L+RNT T R+ +LG+ I + Sbjct: 62 CRAIAAAVFGDANKIKVVPLNSQQRFTALQSGEVDVLTRNTTVTQQRDTALGIIHAGINF 121 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF++ K G+ S +++GA+IC+Q GT+ E TLAD+ +A+N+ Y P+V E E+ Sbjct: 122 YDGQGFLVPKSLGVKSAKEINGATICLQTGTSNENTLADWARANNVTYKPVVIETFNEVV 181 Query: 184 AAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A+ A RCD ++ D S L +++ P ++V+LP+IISK PL P + QGD W NIV Sbjct: 182 NAFAAGRCDVFSTDASGLASIRISKLQNPDDYVVLPEIISKEPLGPFVRQGDDAWLNIVR 241 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 W+ AM+ AEE G+T +N+++ +K ++NP+++R LG+ G LGL + W Y I++ Sbjct: 242 WSLSAMIEAEEYGVTSRNVDEQAK-SSNPNIKRILGVTPGG--GANLGLDEKWAYNIVKQ 298 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F+RN+G S LKI RG NA W++GGLMYA PIR Sbjct: 299 VGNYGESFERNVGQGSPLKIKRGLNAQWTQGGLMYALPIR 338 >gi|144899134|emb|CAM75998.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Magnetospirillum gryphiswaldense MSR-1] Length = 340 Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 154/341 (45%), Positives = 235/341 (68%), Gaps = 3/341 (0%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F + + + + + +K +GF++CG+N GL GF+ G+W G DVD Sbjct: 2 KAFKACAIAATLAVTSMPAWAGPTVDAVKAKGFVQCGVNLGLYGFSAPDDKGNWSGLDVD 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 CRA+++A+F D SK++Y PL+A++R ALQS +ID+L+RNT WTL R+ + GL F Sbjct: 62 ACRAVAAAVFGDASKVKYTPLSAQQRLPALQSGEIDLLARNTTWTLSRDTANGLNFTVTN 121 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQGF++ K G+ + +L+GA++CV GTTTE LAD+F+A+ M Y P+V E+ EE+ Sbjct: 122 YYDGQGFMVPTKLGVKAAKELNGATVCVLPGTTTEQNLADWFRANKMTYKPVVIEKNEEL 181 Query: 183 DAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +A+ A RCD YT D S L A++ P++++ILP++ISK PLA A+ GD +W ++V Sbjct: 182 ASAFIAGRCDVYTSDASQLAAIRANEMPNPADYLILPELISKEPLAVAVRHGDDQWMDVV 241 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 W+ YAM+ AEE G+T N++Q++ + +P+++R LG+ ++ G+ALGL + W II+ Sbjct: 242 RWSIYAMIAAEEKGVTMANVDQMAASSPDPEIKRLLGV--TAGNGKALGLDEAWAKTIIK 299 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE FDRN+G+ S+LKI RG NAL+++GGLMYAPP + Sbjct: 300 QVGNYGESFDRNVGSGSKLKIARGQNALYTQGGLMYAPPFK 340 >gi|123444011|ref|YP_001007981.1| ABC transporter periplasmic solute-binding protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090972|emb|CAL13855.1| Putative ABC transporter periplasmic solute binding protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 341 Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 161/343 (46%), Positives = 229/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ L + +A L +KK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++AIF D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G+ F Sbjct: 61 DVDVCRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P E ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+T KN+ +++ T PD+ LG + N G+ L + DW +I Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEELAAKPTTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE FDRN+G SELKI RG NALW+ GGL YAPP+R Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNNGGLQYAPPVR 341 >gi|89070522|ref|ZP_01157811.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Oceanicola granulosus HTCC2516] gi|89043829|gb|EAR50027.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Oceanicola granulosus HTCC2516] Length = 339 Score = 345 bits (886), Expect = 4e-93, Method: Composition-based stats. Identities = 154/343 (44%), Positives = 219/343 (63%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + + ++ A+ L D+K RG L CG++TGL GF+ ANG W+GFD Sbjct: 1 MKKSVFLG--ALTVAGLAAGASAAATLDDVKARGTLNCGVSTGLTGFSAPDANGVWQGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V FCRAL++A+ DP+ ++++P + RF AL S +ID+L+RNT WT R+ L F Sbjct: 59 VAFCRALAAAVLGDPNAVEFVPTTGQTRFTALSSNEIDVLARNTTWTFSRDNDLKFEFAG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGFI+ ++ G++S +L GA++C+Q GTTTEL LAD+F+ ++M+Y P+ E Sbjct: 119 VNYYDGQGFIVPRELGVASAMELDGATVCIQTGTTTELNLADFFRVNDMEYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CDAYT D S L A + T + P +HVILP+IISK PL P + GD EW +I Sbjct: 179 EAQQQYLAGACDAYTTDASGLAATRATFENPEDHVILPEIISKEPLGPLVRHGDPEWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTN-PDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V WT A++ AEE G+T NI Q++ + + +V R LG + +G +GL DW R Sbjct: 239 VRWTLQALIAAEEYGVTSANIEQMASEAGDNAEVNRLLGTE--GELGAMIGLDSDWAQRA 296 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I GNYGE+F+ N+G S + + RG NA +S GGL+YA P R Sbjct: 297 IAAGGNYGEIFENNIGESSPVGLARGLNAQYSNGGLIYALPFR 339 >gi|254504024|ref|ZP_05116175.1| lysine-arginine-ornithine-binding periplasmic protein [Labrenzia alexandrii DFL-11] gi|222440095|gb|EEE46774.1| lysine-arginine-ornithine-binding periplasmic protein [Labrenzia alexandrii DFL-11] Length = 325 Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats. Identities = 163/316 (51%), Positives = 227/316 (71%), Gaps = 3/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K +GF++CG++ GL GF+ A G+W G DVD CRA+++A+F D S +++ PL+AK Sbjct: 13 LEDVKGKGFIQCGVSQGLPGFSNPDAQGNWTGLDVDLCRAMAAAVFGDASAVKFTPLSAK 72 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 ERF ALQS ++D+LSRNT WT+ R+ LGL F + Y+DGQGF++ K G++S ++SGA Sbjct: 73 ERFTALQSGEVDVLSRNTTWTMSRDTQLGLNFAGVNYYDGQGFMVRKDLGVTSALEMSGA 132 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 S+C GTTTEL +ADYF+A+NM Y + FE+ +E+ AAY A RCD YT D S LYA +L Sbjct: 133 SVCTNTGTTTELNVADYFRANNMPYEIVAFEKADEVVAAYDAGRCDVYTTDASGLYAQRL 192 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 P +H++LP+IISK PL P + QGD EW+NI WT AM+ AEELG+T N++++ K Sbjct: 193 KLTNPGDHMVLPEIISKEPLGPVVRQGDDEWFNIAKWTLNAMINAEELGVTSANVDEM-K 251 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 + NP V+R LG + GEA+GL+ DW Y I++++GNY E F+ N+G + L I RG Sbjct: 252 ASDNPSVKRLLGAE--GAFGEAIGLSNDWAYNIVKNVGNYEESFNANVGPDTPLGISRGV 309 Query: 327 NALWSKGGLMYAPPIR 342 NALWS GG +YAPP+R Sbjct: 310 NALWSNGGFLYAPPVR 325 >gi|238789893|ref|ZP_04633673.1| Extracellular solute-binding protein, family 3 [Yersinia frederiksenii ATCC 33641] gi|238721966|gb|EEQ13626.1| Extracellular solute-binding protein, family 3 [Yersinia frederiksenii ATCC 33641] Length = 341 Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats. Identities = 161/343 (46%), Positives = 229/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ L + +A L +KK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++AIF D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G+ F Sbjct: 61 DVDVCRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P E ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+T KN+ ++ + PD+ LG + N G+ L + DW +I Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEALAAKPSTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE FDRN+G SELKI RG NALW+KGGL YAPP+R Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNKGGLQYAPPVR 341 >gi|224371700|ref|YP_002605864.1| amino acid-binding periplasmic amino acid binding protein [Desulfobacterium autotrophicum HRM2] gi|223694417|gb|ACN17700.1| amino acid-binding periplasmic amino acid binding protein [Desulfobacterium autotrophicum HRM2] Length = 332 Score = 345 bits (885), Expect = 5e-93, Method: Composition-based stats. Identities = 146/334 (43%), Positives = 221/334 (66%), Gaps = 2/334 (0%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 ++ +++ F A L D++ + L CGI+ G+ GF+ + G W GFDVD RA++ Sbjct: 1 MIFIMMGAFPCTGPWAGTLEDVRAKDVLTCGISEGIPGFSIPDSTGKWVGFDVDMARAVA 60 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +A+ DP KI+++PL +K++ +A+ S Q+D+ SR T WTL R+ G+ F I ++DGQG Sbjct: 61 AAVLSDPQKIKFVPLASKQKIIAVSSGQVDLTSRTTTWTLKRDGKQGVDFTKIVFYDGQG 120 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 F++ K G+ S +++ GA++CV AGTT+EL LAD+ +A+ +K +VF+ +E AY Sbjct: 121 FMVKKALGVDSATKIDGATVCVTAGTTSELNLADFARANGLKIEALVFDGKKEALNAYAT 180 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 RCD +T D+S L +L+ T P++H I+P++ISK PLAP + GD +W +IV+W + Sbjct: 181 GRCDCFTTDVSQLASLRTTLPNPNDHEIMPEVISKEPLAPLVRHGDNQWKDIVTWVLNGL 240 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 V AEE GIT N+ ++ + + NP VQR LG KS + G +GL KDW R+I+ +GNYGE Sbjct: 241 VAAEEYGITSANVLEMKEKSENPVVQRMLG--KSGDTGSYIGLDKDWMVRVIQAVGNYGE 298 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++DR+ G + L IPRG N LW+KGGL YA PIR Sbjct: 299 IYDRHFGPATALNIPRGVNRLWTKGGLQYALPIR 332 >gi|15966449|ref|NP_386802.1| putative amino acid-binding periplasmic signal peptide protein [Sinorhizobium meliloti 1021] gi|15075720|emb|CAC47275.1| Putative amino acid-binding periplasmic signal peptide protein [Sinorhizobium meliloti 1021] Length = 331 Score = 345 bits (885), Expect = 5e-93, Method: Composition-based stats. Identities = 155/334 (46%), Positives = 229/334 (68%), Gaps = 3/334 (0%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + F + A+ L +K+RG L+CG++ G++GF+ G+W GFD+DFCRA++ Sbjct: 1 MALFATAFLAGTTAQAATLDVVKQRGELRCGVSQGVLGFSAPDDKGEWSGFDIDFCRAVA 60 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +A P K++Y+PL+ KERF ALQS ++D+LSR T WTL R+ LG++F + Y+DGQ Sbjct: 61 AATLGSPDKVKYVPLSTKERFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVGVNYYDGQA 120 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 F++ G+ SV +LSGAS+C + GTTTE +ADYF A+ ++Y I FE+ ++ A+ + Sbjct: 121 FMVRGDIGVKSVKELSGASVCTETGTTTEQNMADYFSANKIEYQVIAFEKADQTIQAFNS 180 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 RCD Y+ D SALY+ +LT + P V+LP++ISK PL PA+ QGD +W+ +V WT +AM Sbjct: 181 GRCDVYSTDASALYSQRLTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKVVRWTLFAM 240 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 + AEELGIT++N + + T +RFLGID + G+ALGL W Y+ + +GNYGE Sbjct: 241 IEAEELGITRENAASLLESGTAAQ-KRFLGIDNEA--GKALGLDPKWAYQTVAAVGNYGE 297 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +F+R+LG +S L+I RG N LW+ GGL+YAPP+R Sbjct: 298 IFERHLGKESALRIDRGLNKLWNNGGLIYAPPVR 331 >gi|312881587|ref|ZP_07741365.1| amino acid ABC transporter amino acid-binding protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309370650|gb|EFP98124.1| amino acid ABC transporter amino acid-binding protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 342 Score = 345 bits (885), Expect = 5e-93, Method: Composition-based stats. Identities = 161/342 (47%), Positives = 228/342 (66%), Gaps = 4/342 (1%) Query: 2 YKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 S++ + + L + K+GF+ CG++TGL GF+ + G+W+G D Sbjct: 4 KLTLLASVVAASSALIATHAFAAGDTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGID 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V++C+AL+SA+ D K++Y+PL AKERF ALQS ++D+LSRNT WTL R+ +LGL F Sbjct: 64 VEYCQALASAVLGDKKKVKYVPLTAKERFTALQSGEVDVLSRNTTWTLHRDTALGLNFVG 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+ S +L GAS+CVQ+GTTTEL LADYF+ MKY P+VF+ Sbjct: 124 VNYYDGQGFMVKKDLGLKSAKELDGASVCVQSGTTTELNLADYFRNSGMKYRPVVFDTAA 183 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + A RCD T D S LYAL+L P+ +LP+IISK PL P + QGD +W+NI Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPASAQVLPEIISKEPLGPVVRQGDDQWFNI 243 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 WT AMV AEE GI+ KN +++ K + +P+++R LG++ G+ LG+ DW Y+I+ Sbjct: 244 AKWTLAAMVNAEEYGISSKNADEMLK-SKDPNIRRILGVE--GPKGKGLGIRDDWGYQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 301 KQVGNYGESFERTVGQGSPLQISRGVNALWNAGGFMYAPPIR 342 >gi|307152419|ref|YP_003887803.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] gi|306982647|gb|ADN14528.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] Length = 356 Score = 345 bits (884), Expect = 7e-93, Method: Composition-based stats. Identities = 142/357 (39%), Positives = 220/357 (61%), Gaps = 22/357 (6%) Query: 3 KDFFVSILCLIILFFT--------------SFSTNASI--LGDIKKRGFLKCGINTGLVG 46 + V+++ L+ + N L IK RG L CG+N + G Sbjct: 5 RYLLVAVILLVTSLTACGEGTNNAGNSNTQASPANGETSRLDTIKARGTLICGVNGEVPG 64 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F+ V G ++G DVD CRA+++A+FDDP+K+++ L A++RF A+QS ++DIL+RNT W Sbjct: 65 FSFVDEKGQFEGLDVDMCRAVAAALFDDPNKVEFRKLTAEQRFTAVQSGEVDILNRNTTW 124 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 TL R+ S G+ F P T++DGQG ++ K GI+ + L G SICV +GTTTE LAD + Sbjct: 125 TLSRDTSTGMEFGPTTFYDGQGMMVTKASGITKLEDLKGKSICVLSGTTTEQNLADQMRK 184 Query: 167 HNMK-YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 + Y P+ + V+++ AAY+ RC+ T D S L A + +P +H++L ++SK P Sbjct: 185 RGVTAYTPVASDDVDQLYAAYQEGRCEGITSDRSQLVARRSVLPKPQDHIVLDVVMSKEP 244 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285 L + GD++W++ V W YA++ EELGI KNI K + +P+V+RFLG++ + Sbjct: 245 LGTLVADGDSKWFDTVKWITYAVIEGEELGINSKNIANFDK-SQDPNVRRFLGLE--GTL 301 Query: 286 GEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 G+ +GL D+ R+I+H+GNYGE+++RN+G L + RG N LW+ GGL+Y+PP R Sbjct: 302 GQDMGLPNDFAARVIKHVGNYGEIYERNIGK--PLGLERGPNRLWTNGGLLYSPPFR 356 >gi|238794642|ref|ZP_04638248.1| Extracellular solute-binding protein, family 3 [Yersinia intermedia ATCC 29909] gi|238726031|gb|EEQ17579.1| Extracellular solute-binding protein, family 3 [Yersinia intermedia ATCC 29909] Length = 341 Score = 345 bits (884), Expect = 8e-93, Method: Composition-based stats. Identities = 160/343 (46%), Positives = 228/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ L + +A L +KK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G+ F Sbjct: 61 DVDVCRGVAAAVFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P E ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+T KN+ ++ T PD+ LG + N G+ L + DW +I Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEALAAKPTTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE FDRN+G SELKI RG NALW+ GGL YAPP+R Sbjct: 299 VKQVGNYGESFDRNVGLGSELKIKRGQNALWNNGGLQYAPPVR 341 >gi|28898394|ref|NP_797999.1| amino acid ABC transporter periplasmic amino acid-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|153839329|ref|ZP_01991996.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus AQ3810] gi|260366020|ref|ZP_05778498.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus K5030] gi|260876625|ref|ZP_05888980.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus AN-5034] gi|260898001|ref|ZP_05906497.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus Peru-466] gi|260901584|ref|ZP_05909979.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus AQ4037] gi|28806611|dbj|BAC59883.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|149747161|gb|EDM58149.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus AQ3810] gi|308088041|gb|EFO37736.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus Peru-466] gi|308094322|gb|EFO44017.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus AN-5034] gi|308108540|gb|EFO46080.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus AQ4037] gi|308114193|gb|EFO51733.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio parahaemolyticus K5030] gi|328473628|gb|EGF44463.1| amino acid ABC transporter periplasmic amino acid-binding protein [Vibrio parahaemolyticus 10329] Length = 342 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 166/342 (48%), Positives = 230/342 (67%), Gaps = 4/342 (1%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 S++ + + A L + K+GFL CG++TGL GF+ + G+W+G D Sbjct: 4 KLTILASVVAASTAMMATSAQAADTTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V++C+AL++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F Sbjct: 64 VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K GISS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ Sbjct: 124 VNYYDGQGFMVKKDLGISSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 183 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQWFNI 243 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 WT AMV AEE GIT KN +++ K + +P+++R LG+D G+ LG+ DW Y+++ Sbjct: 244 AKWTLAAMVNAEEYGITSKNADEMLK-SQDPNIKRILGVD--GPKGKGLGIRDDWGYQVV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 301 KQVGNYGESFERTVGKGSPLEIARGVNALWNAGGFMYAPPIR 342 >gi|24114551|ref|NP_709061.1| putative periplasmic binding transport protein [Shigella flexneri 2a str. 301] gi|24053744|gb|AAN44768.1| putative periplasmic binding transport protein [Shigella flexneri 2a str. 301] gi|281602643|gb|ADA75627.1| putative periplasmic binding transport protein [Shigella flexneri 2002017] Length = 341 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 155/343 (45%), Positives = 230/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A L ++K+GF++CGI+ GL F+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPRFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y I Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ + NY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 IKQVSNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341 >gi|319779135|ref|YP_004130048.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Taylorella equigenitalis MCE9] gi|317109159|gb|ADU91905.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Taylorella equigenitalis MCE9] Length = 336 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 151/343 (44%), Positives = 226/343 (65%), Gaps = 8/343 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + L S A L +K RG + CG TG GF+ G+W+G D Sbjct: 1 MKK----LSLLIAGLVLASTQVQADTLETVKSRGHVVCGTTTGFAGFSAPNDKGEWEGLD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD C+++++A+F D SK + +PLN+++RF ALQS +IDIL+RNT T R+ ++GL Sbjct: 57 VDLCKSIAAAVFGDASKFKTVPLNSQQRFTALQSGEIDILTRNTTVTQQRDTAIGLMSPG 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++DGQGF++ K G+ S +L GA++C+Q GT+ E T+AD+ +A+ + Y P+VF++ Sbjct: 117 VNFYDGQGFLIKKDLGVKSAKELDGATVCMQTGTSNENTMADWARANKITYKPVVFDQFN 176 Query: 181 EIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ A+ + RCD +T D S L +++ P ++V+LP+IISK PL P + Q D +W+N Sbjct: 177 EVVNAFASGRCDVFTTDASGLASIRISKLSNPDDYVVLPEIISKEPLGPFVRQSDDKWFN 236 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W +A AEELGIT KN+++ K++TNP+VQR LG+ + G+ LGL++DW Y++ Sbjct: 237 IVKWVMHAQWNAEELGITSKNVDE-QKNSTNPNVQRLLGV--TEGSGKNLGLSEDWAYQV 293 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNYGE FDRN+G S LK+PRG N L++ GGL Y PIR Sbjct: 294 IKQVGNYGESFDRNVGKDSVLKVPRGLNKLYTDGGLHYGLPIR 336 >gi|84685382|ref|ZP_01013280.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Maritimibacter alkaliphilus HTCC2654] gi|84666539|gb|EAQ13011.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacterales bacterium HTCC2654] Length = 338 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 160/342 (46%), Positives = 218/342 (63%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + F + S +A+ L D++ RG LKCG N+GL GFA ANG W+GFD Sbjct: 1 MKKSVFLG--ALTVAGFVAGSASAATLDDVQARGSLKCGSNSGLTGFAAPDANGHWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ DP ++++P K RF AL S ++DIL RNT WTL R++ L F Sbjct: 59 VAVCRAVAAAVLGDPEAVEFVPTTPKTRFTALASGEVDILVRNTTWTLTRDVDLKFTFTG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGFI+ K G+SS +L GA++C+Q GTTTEL LAD+F+ +N+ Y P+ E Sbjct: 119 VNYYDGQGFIVPKALGVSSAKELDGATVCIQTGTTTELNLADFFRTNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + + + P++H ILP+IISK PL P + GD EW +I Sbjct: 179 EAQQQYLAGACDTYTTDASGLAATRASFENPADHAILPEIISKEPLGPLVRHGDDEWADI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A+V AEE GIT NI +++ T NP++ R LG + +GE LGL DW + I Sbjct: 239 VRWTLNALVAAEEFGITSTNIEELASGTDNPEINRILGTE--GTMGEMLGLEADWAMKAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F++N+G + + + RG NA W GGL YAPP R Sbjct: 297 AAGGNYGEIFEKNIGESTPIGLARGLNAQWKDGGLQYAPPFR 338 >gi|238798512|ref|ZP_04641991.1| Extracellular solute-binding protein, family 3 [Yersinia mollaretii ATCC 43969] gi|238717674|gb|EEQ09511.1| Extracellular solute-binding protein, family 3 [Yersinia mollaretii ATCC 43969] Length = 341 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 161/343 (46%), Positives = 229/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F +++ L + +A L +KK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMFSTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++AIF D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G+ F Sbjct: 61 DVDVCRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P E ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 +V WT +AM+ AEE+G+T KN+ ++ T PD+ LG + N G+ L + DW +I Sbjct: 241 VVRWTLFAMLNAEEMGVTSKNVEALAAKPTTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE FDRN+G SELKI RG NALW+ GGL YAPP+R Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNNGGLQYAPPVR 341 >gi|330429782|gb|AEC21116.1| putative extracellular solute-binding protein [Pusillimonas sp. T7-7] Length = 338 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 149/343 (43%), Positives = 222/343 (64%), Gaps = 6/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + +L + + +A L +K+RG + CG+ TG GF+ A G W+G D Sbjct: 1 MRK--FKYVAGAAVLAASFSAAHADTLDVVKERGVVHCGVTTGFAGFSAPDAKGVWQGLD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A D K + +PL++++RF ALQS +ID+L+RNT T R+ +LG Sbjct: 59 VDLCRAVAAATLGDAEKFKAVPLSSQQRFTALQSGEIDLLARNTTVTQQRDTALGAISAG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++DGQGF++ K G+SS +L GAS+C+Q GT+ E T+AD+ +A+N+ Y P+V E+ Sbjct: 119 VNFYDGQGFLVPKSLGVSSAKELDGASVCMQTGTSNENTMADWARANNITYKPVVIEQFN 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ A+ A RCD +T D S L +++ P ++ +LP+IISK PL P + QGD W N Sbjct: 179 EVVNAFAAGRCDVFTTDASGLASIRISKLSNPDDYQVLPEIISKEPLGPFVRQGDDRWLN 238 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 +V W+ AM+ AEELGIT N+++ K + NP+V+R LG+ + G+ LG+ + W Y I Sbjct: 239 VVKWSLQAMIGAEELGITSANVDEQLK-SENPNVKRLLGV--TEGAGKNLGVDEKWAYNI 295 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNYGE FDRN+G S L+I RG NA W+ GGLMY P+R Sbjct: 296 IKQVGNYGESFDRNVGKGSPLQIERGLNAQWTDGGLMYGLPVR 338 >gi|239815922|ref|YP_002944832.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239802499|gb|ACS19566.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 344 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 154/320 (48%), Positives = 220/320 (68%), Gaps = 3/320 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L +K+RG +KCG+ G+ GF+ G+W G DVD CRA+++A+ DP K+ ++PL Sbjct: 27 GKTLDAVKQRGTVKCGVTNGVAGFSAPDTQGNWSGLDVDTCRAIAAAVLGDPKKVDFVPL 86 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 N+++RF ALQ+ +IDIL+RNT WTL R+ SLG F ITY+DGQGF++ KK ++S QL Sbjct: 87 NSQQRFSALQAGEIDILARNTTWTLTRDASLGFNFTTITYYDGQGFLVPKKLKVTSAKQL 146 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 A+IC Q+GTT E ++DYF+A N+ +VFE E A+ + RC A+T D SAL Sbjct: 147 KNATICTQSGTTNEKNVSDYFRAQNIPVKTVVFESFEASFKAFFSGRCQAFTTDASALAG 206 Query: 204 LKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 L+ P ++VILP++ISK PLAP + +GD EW+ I W A++ AEE G+TQ N + Sbjct: 207 LRNKEAPNPDDYVILPELISKEPLAPLVRRGDDEWFAIAKWVPNALIEAEEFGVTQANAD 266 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 ++ + +P QR LG ++G+ LGL KDW++R I+ +GNYGEMF+RN+G +S LK+ Sbjct: 267 ELKAGSKDPAQQRLLGA--GEDLGKLLGLDKDWSFRAIKAVGNYGEMFERNVGPKSVLKL 324 Query: 323 PRGYNALWSKGGLMYAPPIR 342 PRG N LW+KGGL+YAPP+R Sbjct: 325 PRGSNNLWNKGGLIYAPPVR 344 >gi|49087174|gb|AAT51425.1| PA3858 [synthetic construct] Length = 342 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 157/342 (45%), Positives = 236/342 (69%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +L + L ++ + + L K++G+++CG++ GL GF+ A G +KG D Sbjct: 4 MKGTWL--LLAAVCLGASATAEAGATLDAGKRKGYVQCGVSDGLPGFSYADAKGRFKGLD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRAL++A+F D K+++ PL+A ERF ALQS +D+LSRNT WT R+ +LG+ F Sbjct: 62 VDICRALAAALFGDAEKVRFTPLSATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTG 121 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TYFDGQGF++++K G+SS +L A++C+Q+GTT EL +ADYF+AH ++Y ++ + E Sbjct: 122 VTYFDGQGFLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYE 181 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A +CD + D S LYA +L +P ++V+LP++ISK PL PA+ QGD W+NI Sbjct: 182 KSARALEAGQCDVLSSDQSQLYAQRLKLAKPEQYVVLPEVISKEPLGPAVRQGDEAWFNI 241 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT Y ++ AEELG+T N+ + ++D+ NPDV R LG + + G+ L L +DW +++ Sbjct: 242 VRWTLYGLLNAEELGVTSSNVERQARDSRNPDVARLLGSE--GDAGKDLQLPRDWVVQMV 299 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL YAPPIR Sbjct: 300 RQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 341 >gi|238782940|ref|ZP_04626968.1| Extracellular solute-binding protein, family 3 [Yersinia bercovieri ATCC 43970] gi|238716143|gb|EEQ08127.1| Extracellular solute-binding protein, family 3 [Yersinia bercovieri ATCC 43970] Length = 341 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 162/343 (47%), Positives = 228/343 (66%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ L + +A L +KK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKTIISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++AIF D K++Y PL AKERF ALQS ++DILSRNT WT R+ +G+ F Sbjct: 61 DVDVCRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ +P E ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +AM+ AEE+G+T KN+ ++ T PD+ LG + N G+ L + DW +I Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEALAAKPTTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNYGE FDRN+G SELKI RG NALW+ GGL YAPPIR Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNSGGLQYAPPIR 341 >gi|300718662|ref|YP_003743465.1| L-amino acid ABC transporter, solute-binding protein [Erwinia billingiae Eb661] gi|299064498|emb|CAX61618.1| L-amino acid ABC transporter, solute-binding protein [Erwinia billingiae Eb661] Length = 341 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 164/343 (47%), Positives = 233/343 (67%), Gaps = 3/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +++ LF + +A L IKK+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMLSTLVAAAALFAVANQAHAGTTLDAIKKKGFIQCGISDGLPGFSFADASGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA ++A+F D +K++Y PL AKERF ALQS ++DILSRNT WT R+ +G F Sbjct: 61 DVDVCRAAAAAVFGDATKVKYTPLTAKERFTALQSGEVDILSRNTTWTSARDGGMGFIFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DG GF+ H+K G+ S +L GA++C+QAGT TEL +ADYFKA+NM+Y P+ F+R Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMQYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A RCD D S LYAL++ +P+E ++LP++ISK PL P + +GD +W+ Sbjct: 181 DESAKALDTGRCDTLASDQSQLYALRIKLGKPNEFIVLPEVISKEPLGPVVRRGDDDWFT 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV W+ YAM+ AEE+GIT N++Q++ TNPD+ LG + + G+ L L W Y I Sbjct: 241 IVKWSLYAMLNAEEMGITSANVDQLAAKPTNPDMAHLLGSE--GDFGKDLKLDNKWAYNI 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++ +GNY E+FDRN+G S+LKI RG NALW+KGG+ YAPP+R Sbjct: 299 VKQVGNYQEVFDRNVGKDSQLKIARGQNALWNKGGIQYAPPVR 341 >gi|209695504|ref|YP_002263433.1| general L-amino acid-binding periplasmic protein precursor [Aliivibrio salmonicida LFI1238] gi|208009456|emb|CAQ79742.1| general L-amino acid-binding periplasmic protein precursor [Aliivibrio salmonicida LFI1238] Length = 342 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 163/339 (48%), Positives = 230/339 (67%), Gaps = 3/339 (0%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F +I L T + L + K G+L+CG++TGL GF+ + G+W+G DV++ Sbjct: 7 TLFAAIATSAALLSTQATAADGTLEKVVKNGYLQCGVSTGLPGFSNPNSKGEWEGIDVEY 66 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 C+A+++A+ D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F + Y Sbjct: 67 CQAVAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLNFVGVNY 126 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF++ K+ G++S +L GAS+CVQ+GTTTEL LADYF+ ++M+Y P+VF+ + Sbjct: 127 YDGQGFMVKKELGLTSAKELDGASVCVQSGTTTELNLADYFRNNSMEYKPVVFDTAAQTS 186 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + A RCD T D S LYAL+L P ILP+IISK PL P + QGD +W+NI W Sbjct: 187 KGFDAGRCDVLTTDQSGLYALRLNLKDPKTAQILPEIISKEPLGPVVRQGDDKWFNINKW 246 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 AM+ AEE GIT N +Q+ K + +P+++R LG+D G+ LG+ DW Y++I+ + Sbjct: 247 VLSAMINAEEYGITSANADQMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVIKQV 303 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE F+R +G S L+I RG NALW+ GG MYA PIR Sbjct: 304 GNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAAPIR 342 >gi|209524398|ref|ZP_03272947.1| extracellular solute-binding protein family 3 [Arthrospira maxima CS-328] gi|209495189|gb|EDZ95495.1| extracellular solute-binding protein family 3 [Arthrospira maxima CS-328] Length = 355 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 140/355 (39%), Positives = 222/355 (62%), Gaps = 16/355 (4%) Query: 2 YKDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGLVGF 47 + F + + CL L T+ + S L +K RG L CG++ G+ GF Sbjct: 3 KRGFLLLVSCLSALSLTACEPGGSPGSDGLAAGGSGQSRLNVVKNRGVLICGVDGGIPGF 62 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + V +G++ G DVD C+A+++A+FDDP+ +QY L++ ERF A+++ ++D+LSRNT WT Sbjct: 63 SFVDQSGEYSGLDVDVCKAVAAALFDDPNAVQYRNLDSTERFEAMRAGEVDMLSRNTTWT 122 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 L R+ S+G+ F P T+ DGQG ++ GI+S+ ++CV+AGTTTEL L D + Sbjct: 123 LSRDTSVGMEFAPTTFHDGQGMMVRADSGITSLEDFQDRAVCVEAGTTTELNLTDNMRER 182 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + + F++ + AAY RC+ T D S L A + T P++H+IL +SK PL Sbjct: 183 GITFETVTFQQADPAYAAYAEGRCEGMTSDKSQLLARRSTLPNPNDHIILDVTMSKEPLG 242 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGE 287 P + D+ W++ V W +A+ AEELGITQ N+ ++++ + NP ++RFLG++ ++G Sbjct: 243 PVTLNNDSAWFDTVKWVTFALFEAEELGITQANVEEIAQTSENPTIRRFLGVE--GDLGT 300 Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GLT D+ R+IRH+GNY E++DRNLG S+ +PR N LW+ GGL+++PP R Sbjct: 301 GMGLTNDFAARVIRHVGNYAEVYDRNLGAGSQFNLPRNENELWTNGGLLFSPPFR 355 >gi|163800832|ref|ZP_02194732.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio sp. AND4] gi|159175181|gb|EDP59978.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio sp. AND4] Length = 342 Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 165/339 (48%), Positives = 225/339 (66%), Gaps = 3/339 (0%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 I + T+ L + K+GFL CG++TGL GF+ A G+W+G DV++ Sbjct: 7 ILASVIAASTTMLATTAHAADGTLEKVTKQGFLNCGVSTGLPGFSNPNAKGEWEGIDVEY 66 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 C+AL++A+ D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y Sbjct: 67 CQALAAAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNY 126 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF++ K +SS L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + Sbjct: 127 YDGQGFMVKKDLEVSSAKDLDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAAQTS 186 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + A RCD T D S LYAL+L + PS +LP+IISK PL P + QGD W+NI W Sbjct: 187 KGFDAGRCDVLTTDQSGLYALRLNLEDPSSATVLPEIISKEPLGPVVRQGDDRWFNIAKW 246 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 T MV AEE GI+ KN++++ K + +P+++R LG+D G+ LG+ DW Y++I+ + Sbjct: 247 TLATMVNAEEYGISSKNVDEMKK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVIKQV 303 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE F+R +G S L I RG NALW+ GG MYAPPIR Sbjct: 304 GNYGESFERTVGTASPLNISRGVNALWNAGGFMYAPPIR 342 >gi|284052552|ref|ZP_06382762.1| extracellular solute-binding protein [Arthrospira platensis str. Paraca] Length = 355 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 143/357 (40%), Positives = 223/357 (62%), Gaps = 17/357 (4%) Query: 1 MYKDFFVSIL-CLIILFFTSF----------STNASI----LGDIKKRGFLKCGINTGLV 45 M K FV + CL L T+ L +K RGFL CG++ G+ Sbjct: 1 MRKWSFVLLASCLSALSLTACEPGGSPGSDGPAAGGTGQSRLNVVKNRGFLICGVDGGIP 60 Query: 46 GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 GF+ V +G++ G DVD C+A+++A+FDDP+ +QY L++ ERF A++S ++D+LSRNT Sbjct: 61 GFSFVDESGEYSGLDVDVCKAVAAALFDDPNAVQYRNLDSTERFEAMRSGEVDMLSRNTT 120 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 WTL R+ S+G+ F P T++DGQG ++ GI+++ ++CV+AGTTTEL L D + Sbjct: 121 WTLSRDTSVGMEFAPTTFYDGQGMMVRADSGITTLEDFQDLAVCVEAGTTTELNLTDNMR 180 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 + + + F++ + AAY RC+ T D S L A + T P++H+IL +SK P Sbjct: 181 ERGITFETVTFQQADPAYAAYAEGRCEGMTSDKSQLLARRSTLPNPNDHIILDVTMSKEP 240 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285 L P + D+ W++ V W +A+ AEELGITQ N+ Q+++ + NP ++RFLG++ ++ Sbjct: 241 LGPVTLNNDSAWFDTVKWVTFALFEAEELGITQANVEQIAQTSENPTIRRFLGVE--GDL 298 Query: 286 GEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 G +GLT D+ R+I+H+GNY E++DRNLG S+ +PR N LW+ GGL+++PP R Sbjct: 299 GTGMGLTNDFAARVIKHVGNYAEVYDRNLGTGSQFNLPRNENELWTNGGLLFSPPFR 355 >gi|89053118|ref|YP_508569.1| lysine-arginine-ornithine-binding periplasmic protein [Jannaschia sp. CCS1] gi|88862667|gb|ABD53544.1| L-glutamine-binding protein / L-glutamate-binding protein / L-asparagine-binding protein / L-aspartate-binding protein [Jannaschia sp. CCS1] Length = 338 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 152/342 (44%), Positives = 219/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + L S LG++++RG L CG++TGL GF+ ANG+W+GFD Sbjct: 1 MKKSVFLGTLAVAGLSAGFVSAQ--TLGEVQERGTLNCGVSTGLTGFSAPDANGEWQGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D ++++P + RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VSVCRAVAAAVLGDAGAVEFVPTTGQTRFTALSSGEIDMLARNTTWTFSRDVDLAFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ ++ G+SS +L GA++C+Q GTTTEL LADYF ++NM Y P+ E Sbjct: 119 VNYYDGQGFMVPRELGVSSALELDGATVCIQTGTTTELNLADYFSSNNMSYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T + PS HV+LP+I+SK PL P + GD E+ ++ Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFEDPSAHVVLPEIVSKEPLGPLVRHGDNEFGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++ AEELG+T N+ ++ T NP+++R LG + N+GE LGL W I Sbjct: 239 VRWTLNALIAAEELGVTSANVGEIGGTTENPEIRRLLGTE--GNLGEMLGLDAGWAAAAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+FDR++G + + + RG NA W+ GGL+YAPP R Sbjct: 297 GAGGNYGEIFDRHIGESTPIGLARGLNAQWTDGGLLYAPPFR 338 >gi|149908408|ref|ZP_01897071.1| general L-amino acid-binding protein [Moritella sp. PE36] gi|149808571|gb|EDM68506.1| general L-amino acid-binding protein [Moritella sp. PE36] Length = 337 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 166/342 (48%), Positives = 228/342 (66%), Gaps = 5/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M L L + NA+ L + K+G L CG++TG+ GF+ + G WKG D Sbjct: 1 MK--VTKIALILGLASTLPNLVNAATLEQVMKKGVLNCGVSTGIPGFSATDSKGVWKGID 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFCR++++A+ D SK++Y+PL AKERF ALQS +ID+LSR + WT R+ SLGL F Sbjct: 59 VDFCRSVAAAVLGDASKVKYIPLTAKERFTALQSGEIDLLSRASTWTATRDTSLGLNFAG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ G++S +L GAS C+QAGTTTEL L DYFK++NM+Y + F+ Sbjct: 119 VNYYDGQGFLVKKEIGVTSAKELDGASFCIQAGTTTELNLTDYFKSNNMEYKAVTFDTSG 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A++ RCDA T D S LY L++ D P ++LPDIISK PL P + QGD W+N+ Sbjct: 179 QTIDAFKKGRCDAVTSDASQLYGLRIKLDDPKSAIVLPDIISKEPLGPVVRQGDDAWFNV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ +A + AEELG+T N+++ K + NP V+R LG+ + GE LGL DW Y+I+ Sbjct: 239 VRWSLFATLEAEELGVTASNVDKQLK-SNNPSVKRLLGV--TGKAGENLGLKSDWAYQIV 295 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNY EMFD N+G S L I RG N LW+KGGLMYA PIR Sbjct: 296 KQVGNYEEMFDNNVGKNSPLNIDRGLNNLWNKGGLMYAMPIR 337 >gi|307546909|ref|YP_003899388.1| ABC transporter periplasmic protein [Halomonas elongata DSM 2581] gi|307218933|emb|CBV44203.1| ABC-type transport system periplasmic substrate-binding protein [Halomonas elongata DSM 2581] Length = 342 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 163/339 (48%), Positives = 223/339 (65%), Gaps = 2/339 (0%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 V++ + T+ S +A+ L ++K+RG L CG+N GL GF+ +G W+G DV+ Sbjct: 6 KALVALSLATLALGTAASASAATLDEVKERGELHCGVNVGLAGFSSSDEDGTWQGLDVET 65 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 CRA+SSAIF DP K+ + PL AKERF ALQS +ID+LSRNT WT R+ SLGL F T+ Sbjct: 66 CRAVSSAIFGDPEKVAFTPLTAKERFTALQSGEIDVLSRNTTWTATRDNSLGLNFTATTF 125 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF++ K+ GI S+ L GASIC+Q+GTT EL LADYF + N+ + F+ ++ Sbjct: 126 YDGQGFMVDKELGIESLEDLDGASICIQSGTTHELNLADYFPSRNIDIKTVTFDTPDQTA 185 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + + RCD T D S L AL+L P IL ++ISK PL P + QGD +W+NI+ W Sbjct: 186 QGFASGRCDVLTSDTSQLSALRLQLPEPDSVEILTELISKEPLGPVVRQGDDQWFNIIKW 245 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 T +AMV AEE+G+ N++++ +D NP V R LG+D GE LGL DW Y II + Sbjct: 246 TIFAMVNAEEMGVNSDNVDEMKQDPPNPGVARLLGVD--GTYGEQLGLGNDWAYNIISQV 303 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +G S L I RG NALW++GG++YAPP+R Sbjct: 304 GNYGEVFADTVGENSPLGISRGMNALWNEGGILYAPPVR 342 >gi|259416581|ref|ZP_05740501.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Silicibacter sp. TrichCH4B] gi|259348020|gb|EEW59797.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Silicibacter sp. TrichCH4B] Length = 335 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 143/334 (42%), Positives = 211/334 (63%), Gaps = 3/334 (0%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L + ++ ++ + A L ++K+RG L CG+ GL GFA + +G W G +V FCRAL++ Sbjct: 4 LTVALVALSAGTAMAGTLEEVKERGKLICGVYPGLPGFAFLSEDGTWMGSEVAFCRALAA 63 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 A+ DP+ ++++P +K RF AL S ++D+L+RNT WT R++ L F + Y+DGQGF Sbjct: 64 AVLKDPTAVEFVPTPSKTRFTALASGEVDVLARNTTWTFSRDVDLKFEFAGVNYYDGQGF 123 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ K+ G++S +L GA++C+Q GTTTEL LAD+F+A+ + Y P+ E E Y A Sbjct: 124 LVPKELGVTSAKELDGATVCIQTGTTTELNLADFFRANGISYEPVPVETNAESQQQYLAG 183 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 CD YT D + L A + P H+ILP+ ISK PL P + GD +W ++V WT A++ Sbjct: 184 ACDVYTTDKAGLAATRSAFADPQNHLILPETISKEPLGPLVRHGDNQWGDVVRWTLNALI 243 Query: 250 TAEELGITQKNINQVSKD-TTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 AEELGITQ N+ ++ T NP++ R LG + GE LGL +DW I GNYGE Sbjct: 244 IAEELGITQDNVTALAASATNNPEINRMLGTE--GTYGEMLGLDQDWAVAAISAGGNYGE 301 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +F R LG + + + RG NAL+ GG++YAPP R Sbjct: 302 IFARFLGEDTLIGLDRGLNALYRDGGILYAPPFR 335 >gi|218437710|ref|YP_002376039.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] gi|218170438|gb|ACK69171.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] Length = 362 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 142/356 (39%), Positives = 217/356 (60%), Gaps = 22/356 (6%) Query: 4 DFFVSILCLIILFFTSFSTNASI----------------LGDIKKRGFLKCGINTGLVGF 47 F + L++ T+ + L +K RG + CGIN + GF Sbjct: 12 RFLLVAAMLLVTPLTACGGGNNTAGDTTAQTSTSGGTSRLDTVKARGTVICGINGEVPGF 71 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + V G + G DVD CRA+++A+FDDP+K+++ L A +RF A+QS ++DIL+RNT WT Sbjct: 72 SFVDEQGQYSGLDVDMCRAVAAALFDDPTKVEFRKLTADQRFTAVQSGEVDILNRNTTWT 131 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 + R+ S+G+ F P T++DGQG ++ K GI+ + L G S+CV +GTTTE LAD + Sbjct: 132 ISRDTSVGMDFAPTTFYDGQGIMVTKASGITKLEDLKGKSVCVLSGTTTEQNLADQMRKR 191 Query: 168 NM-KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + Y PI + V+++ AAY+ RC+ T D S L A + +P +HV+L ++SK PL Sbjct: 192 GIEDYTPIASDDVDQLYAAYQEGRCEGVTSDRSQLVARRSVLPKPEDHVVLDVVLSKEPL 251 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIG 286 P + GD++W + + W YA + AEELGI +NI + K + +P+V+RFLG + +G Sbjct: 252 GPVVADGDSQWSDTIKWITYATIEAEELGINSQNIGEFEK-SEDPNVKRFLGSE--GTLG 308 Query: 287 EALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 E +GL D+ R+I+H+GNY E++DRN+G L + RG N LW+ GGL+Y+PP R Sbjct: 309 EDMGLNNDFATRVIKHVGNYEEIYDRNIGK--PLGLERGPNQLWTNGGLLYSPPFR 362 >gi|298292513|ref|YP_003694452.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296929024|gb|ADH89833.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 337 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 165/342 (48%), Positives = 228/342 (66%), Gaps = 5/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L + T+ +A L D+K RG LKCG++ GL GF+ G W GFD Sbjct: 1 MNR--IAFALAAAGIVMTAGLGHADTLADVKARGTLKCGVSQGLAGFSAKDDKGQWSGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA++SAIFDD SK++Y+PL+A RF ALQ +ID+LSRN+ WT+ RE L L F Sbjct: 59 VDLCRAVASAIFDDASKVEYVPLSADARFPALQKGEIDLLSRNSTWTMQREADLKLLFAA 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ++Y+DGQGF++ K + + +L + +C Q+GTT+ D+FK +NM I V+ Sbjct: 119 VSYYDGQGFLVPVAKKVDTALELDKSKVCTQSGTTSVGNAKDFFKQNNMALELIELPTVD 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E+ AY +CD T D+S LYAL+L +P+++++LPD+ISK PL P + QGD W N Sbjct: 179 EVVKAYDEGKCDVLTTDVSQLYALRLRLAKPADYIVLPDVISKEPLGPVVRQGDDAWLNA 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ YA++ AEELGI+Q ++Q K + PDVQRF+G D + GE LGLTKDW RI+ Sbjct: 239 VKWSFYALLNAEELGISQATLDQALK-SQKPDVQRFVGTD--GSYGEQLGLTKDWAVRIV 295 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +++GNYGE+F+RN+G QS+L IPRG N LWS GG+ YAPPIR Sbjct: 296 KNVGNYGEVFERNIGAQSKLGIPRGINQLWSAGGIQYAPPIR 337 >gi|262274329|ref|ZP_06052140.1| amino acid ABC transporter amino acid-binding protein [Grimontia hollisae CIP 101886] gi|262220892|gb|EEY72206.1| amino acid ABC transporter amino acid-binding protein [Grimontia hollisae CIP 101886] Length = 381 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 154/327 (47%), Positives = 221/327 (67%), Gaps = 3/327 (0%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + + L +KK G + CG+ TGL GF+ +NG W+G DV+FC+A+++A+ D Sbjct: 58 APAPSAQGENTLEKVKKSGVISCGVGTGLPGFSNPNSNGAWEGIDVEFCQAMAAAVLGDK 117 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++Y+PL AKERF ALQS +IDILSRNT WTL R+ +LGL F + Y+DGQGF++ K Sbjct: 118 DKVKYVPLTAKERFTALQSGEIDILSRNTTWTLQRDGTLGLNFVGVNYYDGQGFMVKKDL 177 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 G+ S +L GAS+CVQ+GTTTEL L+DYF+++ M + P+V++ + + + RCD T Sbjct: 178 GVKSALELDGASVCVQSGTTTELNLSDYFRSNGMSFKPVVYDTYDATVKGFESGRCDTLT 237 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D S LYA ++ P V+LP+IISK PL P + QGD W+NI WT M+ EE G Sbjct: 238 TDQSGLYASRIKLADPDSAVVLPEIISKEPLGPVVRQGDDNWFNIAKWTLNTMINGEEFG 297 Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 IT N++++ ++ +P+++R LG D G+ LGL DW Y++I+ +GNYGE F R +G Sbjct: 298 ITSANVDEMV-NSKDPNIRRILGQD--GPKGKGLGLNDDWGYQVIKQVGNYGESFQRTVG 354 Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342 + S L+I RG NALWS+GG++YAPPIR Sbjct: 355 SGSPLQISRGVNALWSEGGILYAPPIR 381 >gi|187476710|ref|YP_784733.1| amino acid-binding periplasmic protein [Bordetella avium 197N] gi|115421296|emb|CAJ47801.1| amino acid-binding periplasmic protein [Bordetella avium 197N] Length = 338 Score = 342 bits (877), Expect = 5e-92, Method: Composition-based stats. Identities = 154/344 (44%), Positives = 224/344 (65%), Gaps = 8/344 (2%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M S++ L L T S A L +K R + CG TG GF+ A G W+G Sbjct: 1 MK---IASLVALAALSLTGLQSAQAGTLDVVKNRDAVVCGTTTGFAGFSAPDAQGVWRGL 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRA+++A+ D +KI+ +PLN+++RF ALQS ++D+L+RNT T R+ +LG+ Sbjct: 58 DVDLCRAVAAAVLGDANKIKIVPLNSQQRFTALQSGEVDVLTRNTSVTQQRDTALGIIHA 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I ++DGQGF++ KK G+ S +L+GA+IC+Q GT+ E TLAD+ +A+N++Y P+V E Sbjct: 118 GINFYDGQGFLVPKKLGVKSAKELNGATICLQQGTSNENTLADWARANNVQYTPVVIETF 177 Query: 180 EEIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E+ A+ A RCD ++ D S L +++ ++P ++++LP++ISK PL P + QGD W Sbjct: 178 NEVVNAFAAGRCDVFSTDASGLASIRISKLEKPDDYIVLPEVISKEPLGPFVRQGDDNWL 237 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 NIV WT AM+ AEE G+T N+++ K + NP+V+R LG+ G +GL W Y Sbjct: 238 NIVYWTLTAMIEAEEYGLTSANVDEQLK-SENPNVRRILGVVP--GAGPNMGLNDKWAYN 294 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I++ +GNYGE FDRN+G S LKI RG NA W+KGGLMYA PIR Sbjct: 295 IVKQVGNYGESFDRNVGKGSPLKIDRGLNAQWTKGGLMYALPIR 338 >gi|328543624|ref|YP_004303733.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Polymorphum gilvum SL003B-26A1] gi|326413367|gb|ADZ70430.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Polymorphum gilvum SL003B-26A1] Length = 300 Score = 342 bits (876), Expect = 6e-92, Method: Composition-based stats. Identities = 161/303 (53%), Positives = 219/303 (72%), Gaps = 3/303 (0%) Query: 40 INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 ++ GL GF+ A G+W G DVD CRA+++A+F D S +++ PL+AKERF ALQS +IDI Sbjct: 1 MSQGLPGFSNPDAQGNWTGLDVDVCRAVAAAVFGDASAVKFTPLSAKERFTALQSGEIDI 60 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159 LSRNT WT+ R+ SLGL F +TY+DGQGF++ K G++S +LSGAS+C GTTTEL Sbjct: 61 LSRNTTWTMSRDTSLGLNFAGVTYYDGQGFMVRKALGVTSALELSGASVCTNTGTTTELN 120 Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 +ADYF+ +NM Y + FE+ +E+ AY A RCD +T D S LYA +L P +H++LP+ Sbjct: 121 VADYFRTNNMPYEIVAFEKSDEVVQAYDAGRCDVFTTDASGLYAERLKLSNPGDHMVLPE 180 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279 IISK PL P + QGD +W+NI WT AM+ AEELG+T N++++ K + NP+++R LGI Sbjct: 181 IISKEPLGPVVRQGDDQWFNIARWTLNAMINAEELGVTSANVDEM-KSSENPEIKRLLGI 239 Query: 280 DKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAP 339 + GE + L+ DW Y II+ +GNYGE FDRN+G + L I RG NALWSKGG++YAP Sbjct: 240 E--GAFGEGVSLSNDWAYNIIKQVGNYGEAFDRNVGPDTPLGIARGLNALWSKGGILYAP 297 Query: 340 PIR 342 PIR Sbjct: 298 PIR 300 >gi|119383545|ref|YP_914601.1| cationic amino acid ABC transporter, periplasmic binding protein [Paracoccus denitrificans PD1222] gi|119373312|gb|ABL68905.1| L-aspartate-binding protein / L-glutamate-binding protein / L-glutamine-binding protein / L-asparagine-binding protein [Paracoccus denitrificans PD1222] Length = 341 Score = 341 bits (875), Expect = 8e-92, Method: Composition-based stats. Identities = 159/343 (46%), Positives = 226/343 (65%), Gaps = 3/343 (0%) Query: 1 MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K FF S+ + + + + L ++K RG L CG+NTGL+GFA ANG+W GF Sbjct: 1 MKKSVFFGSVTAVALAASGALAAEGDTLKEVKARGVLNCGVNTGLIGFAAPDANGNWSGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV FC+A+++A+ D +KI+Y+P + RF AL S ++D+L+RN+ WT R+ L L F Sbjct: 61 DVAFCKAMAAAVLGDATKIKYVPTTGQTRFTALSSGEVDLLARNSTWTFQRDTDLKLDFI 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+DGQGF++ K G+SS +L+GA+IC+Q GTTTEL LADYFKA+NM Y P+ + Sbjct: 121 GVNYYDGQGFMVRKDLGVSSAKELNGATICIQTGTTTELNLADYFKANNMDYQPVNIDSN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E + Y A CDAYT D S L A + + P H+ILP+IISK PL PA+ GD W + Sbjct: 181 AEGEQQYMAGACDAYTTDASGLAATRASFADPENHIILPEIISKEPLGPAVRHGDNNWGD 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 I WT YA++ AEE G+T NI++++K + NP+VQR LG + ++G+ +GL +W R Sbjct: 241 IARWTLYALIAAEEYGVTSANIDELAKSSQNPEVQRLLGT--TDDLGKMIGLDAEWAKRA 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ GNYGE+F +G Q+ + + RG NA W++GGLMYA P R Sbjct: 299 IKAGGNYGEIFAATIGEQTPIGLARGLNAQWTQGGLMYAMPFR 341 >gi|282899899|ref|ZP_06307860.1| extracellular solute-binding protein, family 3 [Cylindrospermopsis raciborskii CS-505] gi|281195169|gb|EFA70105.1| extracellular solute-binding protein, family 3 [Cylindrospermopsis raciborskii CS-505] Length = 378 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 152/354 (42%), Positives = 232/354 (65%), Gaps = 15/354 (4%) Query: 1 MYKDFFVSILCLIILFFTSF------------STNASILGDIKKRGFLKCGINTGLVGFA 48 M K F + + +I+ + G +K L CG++ L GF+ Sbjct: 28 MAKSFLLLAVAPLIIALLGCNSSPTSSTSTSTVQPRNTTGKVKTNLRLVCGVSGELPGFS 87 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V+ + + G DVD CRA+S+A+FD+P K+++ L+AKERF ALQ+ ++D+LSRNT WT Sbjct: 88 FVQTDSKYAGIDVDVCRAVSAALFDNPDKVEFRNLSAKERFTALQTGEVDLLSRNTTWTF 147 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R+ S+GL F P+ +DGQG ++ K GI+S++ L +IC Q GTTTE LAD + Sbjct: 148 SRDTSMGLYFSPVVLYDGQGIMIRKNSGINSLADLKNKAICTQTGTTTEQNLADQMRRRG 207 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + Y P+VFE + A Y RCDA T D SAL + + T +P ++++L +++S PLAP Sbjct: 208 ISYKPVVFEDINVTFATYSEGRCDAITADRSALISRRTTLPKPEDNIVLNELLSSEPLAP 267 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288 A+ QGD +W+NIV W+ YA++ AEELGI +NI+Q ++ +P+++RFLG + N+G+ Sbjct: 268 AVAQGDPQWHNIVKWSVYALIKAEELGINSQNISQF-ANSKDPEIKRFLGTE--GNLGQG 324 Query: 289 LGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GLT D+ RII+H+GNYGE++DR+LG++++L +PRG N L+SKGGL+Y+PP R Sbjct: 325 IGLTNDFAARIIKHVGNYGEIYDRSLGSKTKLNLPRGQNELYSKGGLLYSPPFR 378 >gi|260772752|ref|ZP_05881668.1| amino acid ABC transporter amino acid-binding protein [Vibrio metschnikovii CIP 69.14] gi|260611891|gb|EEX37094.1| amino acid ABC transporter amino acid-binding protein [Vibrio metschnikovii CIP 69.14] Length = 340 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 170/339 (50%), Positives = 230/339 (67%), Gaps = 5/339 (1%) Query: 6 FVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 +++C + L T+ AS L + +G L CGI+TGL GF++ A G W+G DVD+ Sbjct: 5 LATLVCAVSLSLTTHLAFASPTTLDRVLTQGKLTCGISTGLAGFSDADAKGQWQGLDVDY 64 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 CRAL++A+ D +K++Y+PL A+ERF ALQS Q+D+LSRNT WT R+ ++GL F + + Sbjct: 65 CRALAAAVLGDKNKVEYVPLTARERFNALQSGQVDVLSRNTTWTFERDTTMGLNFVGVNF 124 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF++ KK I+ VSQL+ ICVQ+ TTT+L L DYF+ H M Y P+VF+ +I Sbjct: 125 YDGQGFMVTKKSAITQVSQLNNRPICVQSETTTKLNLDDYFRHHGMSYQPVVFDTAIQIA 184 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A+ A RC A T D S LYAL+L +P +ILP+IISK PL P I +GD W NI W Sbjct: 185 RAFNAERCVAVTADKSGLYALRLNLAKPDSAIILPEIISKEPLGPVIREGDDRWLNITRW 244 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 T AM+ AEELGIT N++Q K +TNP+++R LG++ IG LG+ DW Y+II+ + Sbjct: 245 TLAAMINAEELGITSANVDQQRK-STNPEIRRLLGVE--GEIGRPLGINNDWAYQIIKQV 301 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNY E F RN+G S L IPRG NALW+ GG+MYA PIR Sbjct: 302 GNYSESFQRNVGEDSPLAIPRGLNALWNAGGIMYATPIR 340 >gi|254486168|ref|ZP_05099373.1| glutamate/glutamine/aspartate/asparagine-binding protein [Roseobacter sp. GAI101] gi|214043037|gb|EEB83675.1| glutamate/glutamine/aspartate/asparagine-binding protein [Roseobacter sp. GAI101] Length = 338 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 156/342 (45%), Positives = 220/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + + L + + L D+K+RG L CG+ TGLVGFA ANG+W+GFD Sbjct: 1 MNKSVFFGAMTVAGLVAGASAAA--TLDDVKERGKLNCGVTTGLVGFAAPNANGEWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+F DP+ ++++P K RF AL S +ID L+RNT WT R++ L F Sbjct: 59 VAVCRAVAAAVFGDPTAVEFIPTTGKTRFTALASGEIDFLARNTTWTFSRDVDLKFDFIG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+SS L GA++C+Q GTTTEL LAD+F+A+N+ Y P+ E Sbjct: 119 VNYYDGQGFMVPKALGVSSAKDLDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L + + T + P +H+ILP+IISK PL P + GD +W ++ Sbjct: 179 EGQQQYLAGACDTYTTDASGLASTRATFETPGDHIILPEIISKEPLGPLVRHGDNDWGDL 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 W YA++ AEELG+T N+ +++ TTNP+V R LG + +GE LGL+ DW I Sbjct: 239 TRWVLYALIAAEELGVTSANVEEMATSTTNPEVARLLGAE--GTLGEMLGLSADWAKNAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +N+G ++ + + RG NA W+ GGLMYAPP R Sbjct: 297 ASQGNYGEIFAKNIGEETPIGLARGLNAQWTDGGLMYAPPFR 338 >gi|17231656|ref|NP_488204.1| periplasmic amino acid-binding protein of amino acid ABC transporter [Nostoc sp. PCC 7120] gi|17133299|dbj|BAB75863.1| periplasmic amino acid-binding protein of amino acid ABC transporter [Nostoc sp. PCC 7120] Length = 369 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 156/357 (43%), Positives = 222/357 (62%), Gaps = 18/357 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGD---------------IKKRGFLKCGINTGLV 45 M K + LI +A IK RG L CG++ + Sbjct: 16 MNKLAVILGASLIFTTTACGGDSAPTTDTSTNSGSTLVANRWNTIKNRGQLICGVSGEVP 75 Query: 46 GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 GF+ V +G++ G DVD CRA+++A+FD+P +++ L+AKERF ALQ+ ++DILSRNT Sbjct: 76 GFSFVGTDGEYSGIDVDVCRAIAAALFDNPDAVEFRNLSAKERFTALQTGEVDILSRNTT 135 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 WTL R S+GL F P+ ++DGQ ++ K I S++ L +ICVQ GTTTE LAD + Sbjct: 136 WTLSRATSVGLEFAPVVFYDGQAIMVRKNSAIKSLADLKDKAICVQTGTTTEQNLADQMR 195 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 N+ Y P+VFE V A Y RCDA T D SAL + + T P ++V+L ++IS P Sbjct: 196 KRNITYKPVVFEDVNVTFATYAEGRCDAITADRSALVSRRTTLPTPEDNVVLDEVISSEP 255 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285 LAPA+ +GD +W N V+W YA++ EELGI +N+ Q + +PDV+RFLG + ++ Sbjct: 256 LAPAVARGDAKWSNTVNWVVYALIKGEELGINAQNLGQF-TTSNDPDVKRFLGTE--GDL 312 Query: 286 GEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 G+ LGLT D+ RII+H+GNY E++DRNLG +++L + RG N LWSKGGL+Y+PP R Sbjct: 313 GQGLGLTNDFAARIIKHVGNYAEVYDRNLGPKTKLNLARGQNQLWSKGGLLYSPPFR 369 >gi|242280380|ref|YP_002992509.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] gi|242123274|gb|ACS80970.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] Length = 336 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 150/338 (44%), Positives = 226/338 (66%), Gaps = 5/338 (1%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F S +CL+I+ S A L ++KK GFLK G + GF+ + +NG GFDVDF Sbjct: 4 FRTSFICLMIVAMASI-AQAGTLDNVKKDGFLKAGTHIENPGFSALDSNGKRVGFDVDFI 62 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RA+++A+ + +I+Y PL +KER ALQS +IDILSR T T+ R++ LGL F T + Sbjct: 63 RAVAAAV--NVPEIKYTPLTSKERLPALQSGEIDILSRTTTHTMSRDVKLGLDFTVTTLY 120 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQG ++ K+ GI+ L GA++C+Q G+TTEL ++D+F+ + M + P+VF++ ++ Sbjct: 121 DGQGMMVRKELGITDAKDLDGATVCLQTGSTTELNISDFFRKNGMSFTPVVFDKQPDVRK 180 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 AY RCD +T D+S L A + ++P+EH+IL ++ISK PL P + GD +W +IV WT Sbjct: 181 AYDTGRCDVHTTDVSGLAAQRSLMEKPAEHIILSEVISKEPLGPVVRHGDNQWSDIVRWT 240 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 + + AEE G+TQ N+ ++ ++ +P+VQR LG K+ ++ LGL KD RII+ +G Sbjct: 241 IWLTMAAEEKGVTQANVEKMFANSKDPEVQRMLG--KTGSLWTDLGLDKDAPVRIIKTVG 298 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NYGE+FDRNLG ++ L++ RG N W++GGL+YAPP R Sbjct: 299 NYGEIFDRNLGPKTPLRMERGLNKQWNEGGLIYAPPFR 336 >gi|220910023|ref|YP_002485334.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC 7425] gi|219866634|gb|ACL46973.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7425] Length = 364 Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats. Identities = 145/326 (44%), Positives = 210/326 (64%), Gaps = 3/326 (0%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ L I RG L CG++ L GF+ V G++ G DVD CRA+++A+FDDP Sbjct: 42 TTADLQGTGRLATILNRGQLICGVSGELPGFSFVDQQGNYAGLDVDVCRAIAAALFDDPE 101 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 +++ LNAKERF ALQ+ +IDILSRNT T+ R+ ++G+ F P+ ++DGQG ++ + G Sbjct: 102 AVEFRNLNAKERFTALQTGEIDILSRNTTLTMSRDTAIGIQFAPVVFYDGQGIMVRNQDG 161 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I S+ L G SIC+Q GTT E L D + + Y P++FE + + A Y RC A + Sbjct: 162 IRSLKDLQGKSICLQTGTTHEQNLTDQTRKLGIDYQPVIFEDINTMFATYAQGRCQAVSA 221 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S L + + T P+ + ILPD++SK PLAPA+ +GD W +V W Y+++ AEELGI Sbjct: 222 DRSGLISRRTTLPNPNGNEILPDVLSKEPLAPAVAKGDPTWSTVVEWIIYSLIEAEELGI 281 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 T +NI + + +P ++RFLG + N+G LGL+ D+ RII+ +GNYGE++DRNLG Sbjct: 282 TTQNIESKLQ-SADPTLRRFLGRE--GNLGHGLGLSNDFAVRIIKGVGNYGEIYDRNLGP 338 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 + L + RG N WSKGGL+Y+PP R Sbjct: 339 NTLLNLERGLNQQWSKGGLLYSPPFR 364 >gi|254462559|ref|ZP_05075975.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacterales bacterium HTCC2083] gi|206679148|gb|EDZ43635.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacteraceae bacterium HTCC2083] Length = 347 Score = 340 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 151/343 (44%), Positives = 214/343 (62%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + + + + A L D+K RG L CG+ TGLVGFA ANG+W+GFD Sbjct: 9 MKKSVFFG--AMTVAALAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPDANGEWQGFD 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A DPS ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 67 VGVCRAVAAAALGDPSAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 126 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+SS +L GA++C+Q GTTTEL LADYF+ +N+ Y P+ E Sbjct: 127 VNYYDGQGFMVPKALGVSSAKELDGATVCIQTGTTTELNLADYFRTNNISYEPVPIETNA 186 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y CD YT D S L A + + P +HV+LP+IISK PL P + GD+EW ++ Sbjct: 187 EAQPLYLEGACDVYTTDASGLAATRAAFENPGDHVVLPEIISKEPLGPLVRHGDSEWGDV 246 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTN-PDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V W+ A++ AEELG+T NI ++ + P++ R LG + +GE LGL DW + Sbjct: 247 VRWSLNALIAAEELGVTSANIADMAAAAGDNPEINRLLGTE--GTLGEMLGLDADWAKKA 304 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I GNYGE+F++N+G + + + RG NA W+ GGL+Y PP R Sbjct: 305 IMAGGNYGEIFEKNIGENTPIGLGRGLNAQWTDGGLLYVPPFR 347 >gi|33591762|ref|NP_879406.1| amino acid-binding periplasmic protein [Bordetella pertussis Tohama I] gi|33599230|ref|NP_886790.1| amino acid-binding periplasmic protein [Bordetella bronchiseptica RB50] gi|33571405|emb|CAE44886.1| amino acid-binding periplasmic protein [Bordetella pertussis Tohama I] gi|33575276|emb|CAE30739.1| amino acid-binding periplasmic protein [Bordetella bronchiseptica RB50] Length = 338 Score = 340 bits (871), Expect = 3e-91, Method: Composition-based stats. Identities = 148/324 (45%), Positives = 217/324 (66%), Gaps = 4/324 (1%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + L +KKRG + CG TG GF+ G W+G DVD CRA+++A+F D SKI+ Sbjct: 18 AGAQGATLDVVKKRGTVVCGTTTGFAGFSAPDKQGTWRGLDVDLCRAVAAAVFGDASKIK 77 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +PLN+++RF ALQS ++D+L+RNT T R+ +LG+ I ++DGQGF++ K G+ S Sbjct: 78 VVPLNSQQRFTALQSGEVDVLTRNTTVTQQRDTALGIIHAGINFYDGQGFMVPKSLGVKS 137 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 +L+GA+IC+Q GT+ E TLAD+ +A+ + Y P+V E E+ A+ + RCD ++ D S Sbjct: 138 AKELNGATICLQTGTSNENTLADWARANQVSYKPVVIETFNEVVNAFASGRCDVFSTDAS 197 Query: 200 ALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 L +++ ++P ++V+LP+IISK PL P + QGD W NIV W+ AM+ AEE G+T Sbjct: 198 GLASIRISRLEKPDDYVVLPEIISKEPLGPFVRQGDDAWLNIVRWSLSAMIEAEEYGVTT 257 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 N+++ K + NP+V+R LG+ + G LGL + W Y II+ +GNYGE F+RN+G S Sbjct: 258 ANVDEQLK-SENPNVRRILGV--TPGAGANLGLDEKWAYNIIKQVGNYGESFERNVGQGS 314 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 LKI RG NA W++GGLMYA PIR Sbjct: 315 PLKIQRGLNAQWTQGGLMYALPIR 338 >gi|222526721|ref|YP_002571192.1| extracellular solute-binding protein family 3 protein [Chloroflexus sp. Y-400-fl] gi|222450600|gb|ACM54866.1| extracellular solute-binding protein family 3 [Chloroflexus sp. Y-400-fl] Length = 389 Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats. Identities = 148/328 (45%), Positives = 219/328 (66%), Gaps = 4/328 (1%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 T+ + I RG L CG+N L GFA V + G ++GFD+DFCRA+++A+FDD Sbjct: 65 GTTNQPAAGGQIERILSRGTLICGVNNNPLPGFASVDSAGVYRGFDIDFCRAVAAALFDD 124 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 P+K+++ PL+A+ERF ALQS +ID+L RN+ WTL R+ +LGL + P T++DGQG ++ K Sbjct: 125 PTKVEFRPLSAQERFTALQSGEIDVLIRNSTWTLGRDGTLGLDWAPTTFYDGQGMMVRKD 184 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI ++ + GA+ICVQ GTTTEL LAD F+A + + P+VF + AAY A +CD + Sbjct: 185 SGIETLEDMDGATICVQTGTTTELNLADQFRARGLTFTPVVFPDGDATRAAYDAGQCDGF 244 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D S L + P++H IL +SK PL PA+ QGD +W++ V W +A AEE Sbjct: 245 TTDKSGLISSLTLLTNPADHKILDVTMSKEPLGPAVRQGDPQWFDAVRWIVFATFQAEEY 304 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 GIT +N++Q + P+++RFLGI+ +G +GL D+ R++RH+GNY E+++RNL Sbjct: 305 GITSQNLDQFL-GSDVPEIRRFLGIE--GELGAGIGLPNDFAARVVRHVGNYAEIYNRNL 361 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G + +PRG NAL+++GGL+Y+PP R Sbjct: 362 GPDTPFNLPRGLNALYTEGGLLYSPPFR 389 >gi|88797541|ref|ZP_01113130.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Reinekea sp. MED297] gi|88779713|gb|EAR10899.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Reinekea sp. MED297] Length = 331 Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats. Identities = 156/331 (47%), Positives = 220/331 (66%), Gaps = 3/331 (0%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 + L AS L D++K GFLKCG++TG+ GF+ NG+W G DVD CRA+++A Sbjct: 3 VAVALSLAFSLAQASTLNDVRKTGFLKCGVSTGIPGFSNPDRNGNWTGLDVDVCRAVAAA 62 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + + K++Y+PL +RF ALQS +ID+LSR T WT R+ +L + F ++++DGQGF+ Sbjct: 63 VLGNAEKVRYIPLTPGDRFNALQSGEIDVLSRITTWTHSRDTTLDIIFAGVSFYDGQGFM 122 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + + GI S +L GA+ICVQ GTTTE LADYF+ H ++Y P+ F + ++A R Sbjct: 123 VREDAGIRSPQELDGAAICVQKGTTTEQNLADYFREHGLRYQPVSFTSSDRAINGFKAGR 182 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 C A T D S LYA + D PS ILP +ISK PL PA+ Q D +WYNIV W +A+V Sbjct: 183 CSAVTSDRSQLYAQRTKLDDPSSARILPTVISKEPLGPAVRQDDMQWYNIVKWCLFALVN 242 Query: 251 AEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMF 310 AEELG+T N++++ K + P VQR LG++ + G A+GL DW Y II +GNY E++ Sbjct: 243 AEELGVTSANVDEMRK-SNKPVVQRLLGVNS--DTGRAMGLASDWGYNIISQVGNYQEIY 299 Query: 311 DRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 D N+G SEL+I RG N+LWSKGG+++APP+ Sbjct: 300 DGNVGKDSELEIDRGLNSLWSKGGILFAPPL 330 >gi|56751276|ref|YP_171977.1| polar amino acid transport system substrate-binding protein [Synechococcus elongatus PCC 6301] gi|81299057|ref|YP_399265.1| extracellular solute-binding protein [Synechococcus elongatus PCC 7942] gi|56686235|dbj|BAD79457.1| polar amino acid transport system substrate-binding proetin [Synechococcus elongatus PCC 6301] gi|81167938|gb|ABB56278.1| extracellular solute-binding protein, family 3 [Synechococcus elongatus PCC 7942] Length = 359 Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats. Identities = 140/334 (41%), Positives = 209/334 (62%), Gaps = 5/334 (1%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 + + + S L ++ RG L CG+ L GF+ + + G++ G DVD C+A+++A Sbjct: 29 AACRSLGGNETESNSRLNQVQARGKLLCGVEGRLPGFSFLDSQGNYSGLDVDICKAIAAA 88 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA--FRPITYFDGQG 128 +F+DP I+Y L++ ERF AL S ++D+LSRNT WTL R+ G F P T++DGQG Sbjct: 89 LFNDPKAIEYRSLDSVERFPALASGEVDLLSRNTTWTLSRDAKGGNNLEFAPTTFYDGQG 148 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ + GI S+ G SICV+ GTT+EL LAD + ++Y I F + AAY Sbjct: 149 LMVRRNSGIQSLQDFQGKSICVETGTTSELNLADTMRELGVQYQEIKFPNSDANYAAYAQ 208 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 RC+ T D S L A + T +H +L +ISK PL+PA + D+ W+++V W A Sbjct: 209 GRCEGVTSDRSQLAARRTTLSDADQHQLLDAVISKEPLSPATLNNDSPWFDVVKWVVNAT 268 Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308 + AEE GITQ NI+Q K + NP+++RFLG++ +G+ LGL+ D+ YR I+ +GNYGE Sbjct: 269 IQAEEFGITQANIDQF-KTSKNPEIRRFLGLE--GELGQQLGLSNDFAYRAIKAVGNYGE 325 Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +++RN+G QS LK+ RG N L+ GGL+Y+PP R Sbjct: 326 IYERNVGQQSPLKLNRGLNQLYKNGGLLYSPPFR 359 >gi|163848771|ref|YP_001636815.1| extracellular solute-binding protein [Chloroflexus aurantiacus J-10-fl] gi|163670060|gb|ABY36426.1| extracellular solute-binding protein family 3 [Chloroflexus aurantiacus J-10-fl] Length = 389 Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats. Identities = 147/328 (44%), Positives = 219/328 (66%), Gaps = 4/328 (1%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 T+ + I RG L CG+N L GFA V + G ++GFD+DFCRA+++A+FDD Sbjct: 65 GTTNQPAAGGQIERILSRGTLICGVNNNPLPGFASVDSAGVYRGFDIDFCRAVAAALFDD 124 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 P+K+++ PL+A+ERF ALQS +ID+L RN+ WTL R+ +LGL + P T++DGQG ++ K Sbjct: 125 PTKVEFRPLSAQERFTALQSGEIDVLIRNSTWTLGRDGTLGLDWAPTTFYDGQGMMVRKD 184 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI ++ + GA+ICVQ G+TTEL LAD F+A + + P+VF + AAY A +CD + Sbjct: 185 SGIETLEDMDGATICVQTGSTTELNLADQFRARGLTFTPVVFPDGDATRAAYDAGQCDGF 244 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D S L + P++H IL +SK PL PA+ QGD +W++ V W +A AEE Sbjct: 245 TTDKSGLISSLTLLTNPADHKILDVTMSKEPLGPAVRQGDPQWFDAVRWIVFATFQAEEY 304 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 GIT +N++Q + P+++RFLGI+ +G +GL D+ R++RH+GNY E+++RNL Sbjct: 305 GITSQNLDQFL-GSDVPEIRRFLGIE--GELGAGIGLPNDFAARVVRHVGNYAEIYNRNL 361 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G + +PRG NAL+++GGL+Y+PP R Sbjct: 362 GPDTPFNLPRGLNALYTEGGLLYSPPFR 389 >gi|197336291|ref|YP_002156345.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio fischeri MJ11] gi|197317781|gb|ACH67228.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio fischeri MJ11] Length = 342 Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats. Identities = 163/345 (47%), Positives = 231/345 (66%), Gaps = 6/345 (1%) Query: 1 MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M F +I L + L ++K G+L+CG++TGL GF+ + G+W+ Sbjct: 1 MKFKTNTLFAAIATSAALLSAPALAASGTLEKVQKNGYLQCGVSTGLPGFSNPNSKGEWE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV+FC+A+++A+ D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL Sbjct: 61 GIDVEFCQAVAAAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLN 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + Y+DGQGF++ K+ G++S +L GAS+CVQ+GTTTEL LADYF+ +NM+Y P+VF+ Sbjct: 121 FVGVNYYDGQGFMVKKELGLTSAKELDGASVCVQSGTTTELNLADYFRNNNMEYKPVVFD 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + A RCD T D S LYAL+L P +LP+IISK PL P + QGD +W Sbjct: 181 TAAQTSKGFDAGRCDVLTTDQSGLYALRLNLKDPKTAQVLPEIISKEPLGPVVRQGDDQW 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 +NI W AM+ AEE I+ KN +Q+ K + +P+++R LG+D G+ LG+ DW Y Sbjct: 241 FNINKWVLNAMINAEEYDISSKNADQMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGY 297 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++++ +GNYGE F+R +G S L+I RG NALW+ GG MYA PIR Sbjct: 298 QVVKQVGNYGESFERTVGEGSPLQISRGVNALWNAGGFMYAAPIR 342 >gi|110678761|ref|YP_681768.1| glutamate/glutamine/aspartate/asparagine-binding protein [Roseobacter denitrificans OCh 114] gi|109454877|gb|ABG31082.1| glutamate/glutamine/aspartate/asparagine-binding protein [Roseobacter denitrificans OCh 114] Length = 338 Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats. Identities = 155/342 (45%), Positives = 221/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L I + + A L D+K RG L CG+ TGLVGFA A+G+W GFD Sbjct: 1 MKKSVLLG--ALTIAGLAAGAAAAGTLDDVKARGTLNCGVTTGLVGFAAPNADGEWNGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VAVCRAVAAAVLGDATAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFTFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y+DGQGF++ K G++S +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+ E Sbjct: 119 INYYDGQGFMVPKSLGVTSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + + + PS+HV+LP+IISK PL P + GD EW ++ Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRASFENPSDHVLLPEIISKEPLGPLVRHGDDEWGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++TAEELG+T N+++++ + NP+V+R LG + +GE LGL DW R I Sbjct: 239 VRWTLNALITAEELGVTSANVSEMATGSNNPEVKRLLGTE--GTLGEMLGLDADWAMRAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +N+G + + + RG NA W+ GGL+Y+PP R Sbjct: 297 ASQGNYGEIFAKNIGEDTPIALSRGLNAQWTNGGLIYSPPFR 338 >gi|288959842|ref|YP_003450182.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] gi|288912150|dbj|BAI73638.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] Length = 356 Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats. Identities = 143/335 (42%), Positives = 208/335 (62%), Gaps = 4/335 (1%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 ++ I L T + L IK RG +K G+ GF +NG W+GF VDF RAL Sbjct: 26 ALSLAIGLALTGAAKAGPTLDAIKARGSIKVGV-GTQPGFFSPDSNGRWQGFFVDFGRAL 84 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 S A+F+DP K+Q++ + ++R ALQS + DIL T R LG F P+ ++DGQ Sbjct: 85 SIAVFNDPDKVQFVSSSPQQRLPALQSGEFDILLSGVTQTFTRATKLGFHFGPVVFYDGQ 144 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 G ++ KK G++ L+GA++CVQ GTT EL + D+F+ + + + P+V E E A+ Sbjct: 145 GLLVPKKLGVAKGKDLNGATVCVQTGTTGELNITDFFRQNKIAFKPVVIEETAENQKAFS 204 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 + RCD T D S L + +P ++V+LP+ ISK PLAPAI GD +W IV+W YA Sbjct: 205 SGRCDVLTQDASDLAITRTQLPKPDDYVLLPERISKEPLAPAIRYGDDQWLEIVNWAVYA 264 Query: 248 MVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYG 307 + AEELGITQ NI+ + +P ++RFLG+D S +GEA L + Y I++ +GNYG Sbjct: 265 TIQAEELGITQANIDSFL-TSADPTIRRFLGVDPS--LGEAAKLDPKFAYTIVKTVGNYG 321 Query: 308 EMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 E+FDRN+G +++ + RG+N LW++GGL+YAPP R Sbjct: 322 EIFDRNVGPATKVGLDRGFNKLWTQGGLLYAPPFR 356 >gi|319957434|ref|YP_004168697.1| amino acid ABC transporter substrate-binding protein, paat family [Nitratifractor salsuginis DSM 16511] gi|319419838|gb|ADV46948.1| amino acid ABC transporter substrate-binding protein, PAAT family [Nitratifractor salsuginis DSM 16511] Length = 338 Score = 338 bits (866), Expect = 9e-91, Method: Composition-based stats. Identities = 159/315 (50%), Positives = 225/315 (71%), Gaps = 2/315 (0%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 D+KK G LKCG+NTGL GF+E + G W+G DVD+CRAL++ + D SK++Y+PLNAKE Sbjct: 26 DDVKKAGILKCGVNTGLPGFSEADSKGQWRGLDVDYCRALAAVVLGDASKVKYVPLNAKE 85 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 RF ALQS +ID+LSRNT T R+ SLG+ F + Y+DGQGF++ K G+ S +L GA+ Sbjct: 86 RFTALQSGEIDVLSRNTTNTETRDTSLGINFTGVMYYDGQGFMVPKSLGVKSAKELDGAT 145 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C+QAGTTTEL LADYF+A++MK+ I F+ +++ A+ A RCD T D S LYA + Sbjct: 146 VCIQAGTTTELNLADYFRANHMKFKAITFDTNDQVTKAFEAGRCDVLTTDASGLYATRTK 205 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 P ++V+LP+IISK PLAPA+ GD +W++I WT A++TAEE GIT N+++ Sbjct: 206 LANPEKYVVLPEIISKEPLAPAVRHGDDQWFDIAKWTRNALLTAEEKGITMANVDEAKAK 265 Query: 268 TTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYN 327 +T+P+V+R L ++ + + L L K Y I+ +GNYGE+F+RN+G ++ LKI RG N Sbjct: 266 STDPEVKRLLSVE--GKMCDNLKLEKGCFYNAIKQVGNYGEIFERNVGVKTPLKIQRGLN 323 Query: 328 ALWSKGGLMYAPPIR 342 ALW++GGL Y+PP R Sbjct: 324 ALWTQGGLQYSPPFR 338 >gi|15641374|ref|NP_231006.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587999|ref|ZP_01677751.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 2740-80] gi|121728530|ref|ZP_01681553.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae V52] gi|153212726|ref|ZP_01948383.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 1587] gi|153819348|ref|ZP_01972015.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae NCTC 8457] gi|153821335|ref|ZP_01974002.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae B33] gi|153825294|ref|ZP_01977961.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae MZO-2] gi|153828770|ref|ZP_01981437.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 623-39] gi|183179360|ref|ZP_02957571.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae MZO-3] gi|227081533|ref|YP_002810084.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae M66-2] gi|229505057|ref|ZP_04394567.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae BX 330286] gi|229511273|ref|ZP_04400752.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae B33] gi|229515734|ref|ZP_04405193.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae TMA 21] gi|229518391|ref|ZP_04407835.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae RC9] gi|229521468|ref|ZP_04410887.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae TM 11079-80] gi|229529562|ref|ZP_04418952.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae 12129(1)] gi|229608061|ref|YP_002878709.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae MJ-1236] gi|254225346|ref|ZP_04918958.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae V51] gi|254286186|ref|ZP_04961146.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae AM-19226] gi|254848484|ref|ZP_05237834.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255745749|ref|ZP_05419697.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholera CIRS 101] gi|262158973|ref|ZP_06030085.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae INDRE 91/1] gi|262192389|ref|ZP_06050542.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae CT 5369-93] gi|297578947|ref|ZP_06940875.1| amino acid ABC transporter [Vibrio cholerae RC385] gi|298498554|ref|ZP_07008361.1| amino acid ABC transporter [Vibrio cholerae MAK 757] gi|9655856|gb|AAF94520.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547740|gb|EAX57831.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 2740-80] gi|121629194|gb|EAX61634.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae V52] gi|124116376|gb|EAY35196.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 1587] gi|125622187|gb|EAZ50509.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae V51] gi|126510093|gb|EAZ72687.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae NCTC 8457] gi|126521153|gb|EAZ78376.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae B33] gi|148875723|gb|EDL73858.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 623-39] gi|149741122|gb|EDM55181.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae MZO-2] gi|150423855|gb|EDN15796.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae AM-19226] gi|183012771|gb|EDT88071.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae MZO-3] gi|227009421|gb|ACP05633.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae M66-2] gi|229333336|gb|EEN98822.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae 12129(1)] gi|229341566|gb|EEO06569.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae TM 11079-80] gi|229345106|gb|EEO10080.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae RC9] gi|229347503|gb|EEO12463.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae TMA 21] gi|229351238|gb|EEO16179.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae B33] gi|229357280|gb|EEO22197.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae BX 330286] gi|229370716|gb|ACQ61139.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae MJ-1236] gi|254844189|gb|EET22603.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255736824|gb|EET92221.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholera CIRS 101] gi|262029158|gb|EEY47810.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae INDRE 91/1] gi|262031742|gb|EEY50327.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae CT 5369-93] gi|297536541|gb|EFH75374.1| amino acid ABC transporter [Vibrio cholerae RC385] gi|297542887|gb|EFH78937.1| amino acid ABC transporter [Vibrio cholerae MAK 757] gi|327484032|gb|AEA78439.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Vibrio cholerae LMA3894-4] Length = 342 Score = 338 bits (866), Expect = 9e-91, Method: Composition-based stats. Identities = 163/318 (51%), Positives = 227/318 (71%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +GF+ CG++TGL GF+ A G+W+G DV++C+A+++A+ D +K++++PL Sbjct: 28 STLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEYCQAMAAAVLGDKTKVKFVPLT 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K G+ S +L+ Sbjct: 88 AKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKDLGVKSAKELN 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A RCD T D S LYAL Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L ++P V+LP+IISK PL P + Q D +W+N+ W YAMV AEE GIT KN++++ Sbjct: 208 RLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAMVNAEEYGITSKNVDEM 267 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K + NP+V+R LG+D G LG+ DW+Y+I++ +GNYGE FDR +G+ S LKI R Sbjct: 268 MK-SDNPEVKRILGLDGPKGTG--LGIRDDWSYQIVKQVGNYGESFDRTVGSGSPLKIDR 324 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+ GG MYAPPIR Sbjct: 325 GVNALWNAGGFMYAPPIR 342 >gi|154253424|ref|YP_001414248.1| extracellular solute-binding protein [Parvibaculum lavamentivorans DS-1] gi|154157374|gb|ABS64591.1| extracellular solute-binding protein family 3 [Parvibaculum lavamentivorans DS-1] Length = 367 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 156/321 (48%), Positives = 215/321 (66%), Gaps = 3/321 (0%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 L +++RGF++CG++ GL GF+ G W G DVDFCRA+++AIF +P ++++ Sbjct: 50 AAGDTLRRVRQRGFIQCGVSQGLPGFSNPDERGRWSGIDVDFCRAIAAAIFGNPDQVRFR 109 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 PL+AK+RF ALQS +IDILSRNT WT+ R+ LG F +TY+DGQ F++ K GI + + Sbjct: 110 PLSAKDRFTALQSGEIDILSRNTTWTMSRDTQLGFNFVGVTYYDGQSFMVRKAAGIKTTA 169 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+GA+IC + GTTTEL LADYF++ + Y + FE+ +E AY RCDAYT D S L Sbjct: 170 DLAGATICTETGTTTELNLADYFRSRGLSYRVLSFEKNDEAIVAYDRGRCDAYTTDASGL 229 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 YA +L P + IL +IISK PL PA+ QGD +W +I WT A++ AEE GIT NI Sbjct: 230 YATRLKLADPDANTILSEIISKEPLGPAVRQGDPQWEDIARWTLNALLEAEEFGITSANI 289 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 N++ + + NP V+R LG + G ++GL +W IR +GNYGEMF+RN+G + L Sbjct: 290 NEMLE-SDNPRVKRLLGRE--GAYGGSVGLDANWAANAIRAVGNYGEMFERNVGKNTPLG 346 Query: 322 IPRGYNALWSKGGLMYAPPIR 342 I RG NA W+ GGL YAPP+R Sbjct: 347 IERGLNAQWTDGGLQYAPPVR 367 >gi|258621541|ref|ZP_05716574.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio mimicus VM573] gi|258627556|ref|ZP_05722333.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio mimicus VM603] gi|262171608|ref|ZP_06039286.1| amino acid ABC transporter amino acid-binding protein [Vibrio mimicus MB-451] gi|258580138|gb|EEW05110.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio mimicus VM603] gi|258586159|gb|EEW10875.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio mimicus VM573] gi|261892684|gb|EEY38670.1| amino acid ABC transporter amino acid-binding protein [Vibrio mimicus MB-451] Length = 342 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 164/318 (51%), Positives = 227/318 (71%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +GF+ CG++TGL GF+ A GDW+G DV++C+AL++A+ D +K++++PL Sbjct: 28 STLDKVLAQGFITCGVSTGLPGFSNPNAKGDWEGIDVEYCQALAAAVLGDKTKVKFVPLT 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K GI S +L Sbjct: 88 AKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKDLGIKSAKELD 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+CVQ+GTTTEL LADYF+ MKY P+VF+ + + A RCD T D S LYAL Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMKYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L ++P ++LP+IISK PL P + Q D +W+N+ W YAMV AEE GIT KN++++ Sbjct: 208 RLNLEKPDSALVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAMVNAEEYGITSKNVDEM 267 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K + NP+V+R LG+D G LG+ DW+Y+I++ +GNYGE F+R +G+ S L+I R Sbjct: 268 MK-SDNPEVKRILGLDGPKGTG--LGIRDDWSYQIVKQVGNYGESFERTVGSGSPLQIDR 324 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+ GG MYAPPIR Sbjct: 325 GVNALWNAGGFMYAPPIR 342 >gi|171058819|ref|YP_001791168.1| extracellular solute-binding protein [Leptothrix cholodnii SP-6] gi|170776264|gb|ACB34403.1| extracellular solute-binding protein family 3 [Leptothrix cholodnii SP-6] Length = 339 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 144/320 (45%), Positives = 219/320 (68%), Gaps = 3/320 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L IK+R + G++TG+ GF+ + G W G DVD RA+++A+ D K++++PL Sbjct: 22 GKTLDTIKQRDQILVGVSTGVAGFSAADSQGKWTGLDVDVGRAIAAAVLGDADKVKWVPL 81 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + +RF A+QS ++D+LSRNT +TL R+ SLGL + ++DGQGF++ K + S QL Sbjct: 82 ASPQRFTAIQSGEVDVLSRNTTFTLTRDASLGLHQTAVVFYDGQGFMVPAKTKVKSAKQL 141 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++CVQ+GTTTE L D+ +A+ + P+VF++++ +AAY + RC AYT D S L + Sbjct: 142 KGATVCVQSGTTTEKNLTDFSRANKLNLKPVVFDKLDAANAAYFSGRCQAYTTDASGLAS 201 Query: 204 LKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 ++ P +HVILP++ISK PL P + +GD EW+ IV W Y ++ AEE GITQ N++ Sbjct: 202 IRSKEAKDPKDHVILPELISKEPLGPLVRRGDDEWFAIVKWVVYGLIEAEESGITQANVD 261 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 Q+ D+T+P VQR LG K+ + G+ LGL ++W R I+ +GNYGE+++RN+G ++ + + Sbjct: 262 QLKADSTDPVVQRLLG--KTEDTGKLLGLDREWLARAIKAVGNYGEIYERNVGEKTPVGL 319 Query: 323 PRGYNALWSKGGLMYAPPIR 342 PRG NALW+ GGL YA PIR Sbjct: 320 PRGKNALWTNGGLQYAMPIR 339 >gi|84515667|ref|ZP_01003028.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Loktanella vestfoldensis SKA53] gi|84510109|gb|EAQ06565.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Loktanella vestfoldensis SKA53] Length = 339 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 151/343 (44%), Positives = 220/343 (64%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + L T+ +A+ L D+K RG LKCG N GL GFA ANG+W+GFD Sbjct: 1 MTKTVFIGALAVAGL--TAGIASAATLDDVKARGSLKCGSNEGLAGFAAPDANGNWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D ++++PL ++ RF AL + ++D+L RN+ WT R+ L L F Sbjct: 59 VSLCRAIAAAVLGDGQAVEFVPLTSQTRFTALAAGEVDVLVRNSTWTFTRDTDLALDFPA 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y+DGQGF++ + G+SS ++L GA++C+Q GTTTEL LADYF+A+ + Y P+ Sbjct: 119 INYYDGQGFMVPRALGVSSAAELDGATVCIQTGTTTELNLADYFRANGISYEPVPVATNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT DIS L A + T + P +HVILP+++SK PL PA+ GD W +I Sbjct: 179 EGQQQYLAGACDVYTTDISGLAATRATFEAPGDHVILPEVVSKEPLGPAVRHGDNAWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTN-PDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V WT +A+V AEE G+T+ N+ +++ T+ P+V R LG + +G +GL DW ++ Sbjct: 239 VRWTTHALVAAEEYGVTKANVAELAAAPTDNPEVNRLLGTE--GELGAMIGLDADWAVKV 296 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + GNYGE+F+ N+G + + + RG NA W+ GGLMY P R Sbjct: 297 LSVAGNYGEIFEANIGESTAVGLARGLNAQWTDGGLMYGGPFR 339 >gi|298491367|ref|YP_003721544.1| family 1 extracellular solute-binding protein ['Nostoc azollae' 0708] gi|298233285|gb|ADI64421.1| extracellular solute-binding protein family 3 ['Nostoc azollae' 0708] Length = 355 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 153/358 (42%), Positives = 224/358 (62%), Gaps = 19/358 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL----------------GDIKKRGFLKCGINTGL 44 M K F+ + + S + +K RG L CG++ L Sbjct: 1 MLKSAFILASAPLFFTLAACSGESGTQVNTASAPATQVSRNIGSTVKNRGKLICGVSGEL 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 GF+ V + + G DVD CRA+++A+FD+P +++ LN KERF ALQ+ +ID+LSRNT Sbjct: 61 PGFSFVGTDAKYSGIDVDVCRAVTAALFDNPDAVEFRNLNTKERFTALQTGEIDLLSRNT 120 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 WT+ RE S+GL F P+ ++DGQ ++ K GI S++ L +IC Q GTTTE LAD Sbjct: 121 TWTMSRETSVGLQFAPVIFYDGQAIMVSKNSGIKSLADLKNKAICTQTGTTTEQNLADQM 180 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + ++ Y P+VFE V A Y RCD T D SAL + + T +P +++IL +++S Sbjct: 181 RKRSITYKPVVFEDVNITFATYAEGRCDGVTTDRSALISRRTTLPKPEDNIILDELLSSE 240 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284 PLAPA+ +GD +W +IV W Y++V AEELGI +NI Q+ ++ +PD++RFLG + N Sbjct: 241 PLAPAVAKGDPQWNDIVKWVVYSLVKAEELGINSQNIAQL-TNSNDPDIKRFLGTE--GN 297 Query: 285 IGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GE LGLT D+ RI++H+GNYGE++DRNLG +++L +PRG N L KGGL+Y+PP R Sbjct: 298 LGEGLGLTNDFAARIVKHVGNYGEVYDRNLGGKTKLNLPRGQNQLAIKGGLLYSPPFR 355 >gi|219847287|ref|YP_002461720.1| extracellular solute-binding protein family 3 protein [Chloroflexus aggregans DSM 9485] gi|219541546|gb|ACL23284.1| extracellular solute-binding protein family 3 [Chloroflexus aggregans DSM 9485] Length = 389 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 149/328 (45%), Positives = 220/328 (67%), Gaps = 4/328 (1%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 T+ + ++ I RG L CG+N L GFA V A+G + GFD+DFCRA+++A+FDD Sbjct: 65 GTTNQPASGGLIQQILARGRLICGVNNNPLPGFASVDASGVYSGFDIDFCRAVAAALFDD 124 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 P+K+ + PL+A+ERF ALQ+ +ID+L RN+ WTL R+ +LGL + P T++DGQG ++ K Sbjct: 125 PTKVDFRPLSAQERFTALQTGEIDVLIRNSTWTLGRDGNLGLDWAPTTFYDGQGMMVRKD 184 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 GI+++ + GA+ICVQ GTTTEL LAD F+A + + P+VF + AAY A +CD + Sbjct: 185 SGINTLEDMDGATICVQTGTTTELNLADQFRARGLTFTPVVFPDGDSTRAAYDAGQCDGF 244 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D S L + P++H IL +SK PL PA+ QGD +W++ V W +A AEE Sbjct: 245 TTDKSGLISSLTLLSNPADHKILEVTMSKEPLGPAVKQGDPQWFDAVRWIVFATFQAEEY 304 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 GIT +N+N ++ P+++RFLGI+ ++ +GL D+ RIIRH+GNY E+++RNL Sbjct: 305 GITSQNVNDFL-NSDVPEIRRFLGIE--GDLAAGIGLPNDFAVRIIRHVGNYAEIYNRNL 361 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G + +PRG NAL++ GGL+Y+PP R Sbjct: 362 GPDTPFNLPRGLNALYTDGGLLYSPPFR 389 >gi|309791172|ref|ZP_07685704.1| extracellular solute-binding protein family 3 [Oscillochloris trichoides DG6] gi|308226734|gb|EFO80430.1| extracellular solute-binding protein family 3 [Oscillochloris trichoides DG6] Length = 380 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 147/319 (46%), Positives = 220/319 (68%), Gaps = 3/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + I RG L CG+N+ L GF V + G++ GFDV+FCRA+++A+FDDP+K+++ PL Sbjct: 65 GGRIQTIISRGNLICGVNSVLPGFGNVDSTGNFSGFDVEFCRAIAAALFDDPTKVEFRPL 124 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 NA+ERF ALQS ++D+LSRNT TL R+ S+GL F P+T++DGQG ++ K GI S+ + Sbjct: 125 NAQERFTALQSGEVDVLSRNTTATLTRDGSVGLDFAPVTFYDGQGMMVRKDSGIESLEDM 184 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA ICVQ+GTTTEL LAD F++ N+ + ++F+ + AY + +CD +T D S L + Sbjct: 185 EGARICVQSGTTTELNLADQFRSRNINFEAVIFQEADPTFQAYDSGQCDGFTTDKSGLVS 244 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + P +H+IL +SK PLAPA++QGD +W + V W YA + AEELGIT NI Sbjct: 245 YQTKATNPDDHMILDVTMSKEPLAPAVLQGDAQWADAVRWVVYATIEAEELGITSANIGD 304 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + T +P+++RFLG++ +G +GL D+ R+I+H+GNY E+++RNLG + +P Sbjct: 305 FAA-TEDPNIRRFLGVE--GELGAGIGLPNDFAARVIKHVGNYQEIYNRNLGPDTPFNLP 361 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG N L+++GGL+Y+PP R Sbjct: 362 RGLNTLYTEGGLLYSPPFR 380 >gi|119946447|ref|YP_944127.1| ABC amino acid transporter extracellular solute-binding protein, family 3 [Psychromonas ingrahamii 37] gi|119865051|gb|ABM04528.1| ABC amino acid transporter extracellular solute-binding protein, family 3 [Psychromonas ingrahamii 37] Length = 337 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 164/321 (51%), Positives = 229/321 (71%), Gaps = 3/321 (0%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +AS L ++ K+G + CGI+TG+ GF+ + G W+G DVDFC+++++A+F D SK++Y+ Sbjct: 20 ASASTLEEVVKKGDINCGISTGIAGFSSTDSKGVWEGLDVDFCKSVAAAVFGDASKVKYI 79 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 PL AKERF ALQS +ID+LSR T WT R+ SLGL F + Y+DGQGF+++KK GISS Sbjct: 80 PLTAKERFTALQSGEIDVLSRATTWTATRDTSLGLNFAGVNYYDGQGFLVNKKLGISSAK 139 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +LSGA+ C+QAGTT+EL L DYF+++NM+Y + ++ + +++ RCD T D S L Sbjct: 140 ELSGATFCIQAGTTSELNLTDYFQSNNMEYRAVTYDTSGQTVNGFKSGRCDVITSDASQL 199 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 Y LKL D P ++LP+IISK PL P + QGD EW+NIV WT +A + AEELG++ N+ Sbjct: 200 YGLKLKLDDPDSAIVLPEIISKEPLGPVVRQGDDEWFNIVRWTMFATLEAEELGVSSANV 259 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 + + K + NP + R LG KS GE LGL DW Y+I++ +GNYGEMFD+N+G S L Sbjct: 260 DAMLK-SENPSIMRLLG--KSGTAGENLGLKGDWVYQIVKQVGNYGEMFDKNVGKDSPLN 316 Query: 322 IPRGYNALWSKGGLMYAPPIR 342 I RG N LW++GGLMY+ PIR Sbjct: 317 IDRGLNKLWNQGGLMYSMPIR 337 >gi|261210913|ref|ZP_05925203.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. RC341] gi|260839888|gb|EEX66488.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. RC341] Length = 342 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 165/318 (51%), Positives = 227/318 (71%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +GF+ CG++TGL GF+ A GDW+G DV++C+AL++A+ D +K++++PL Sbjct: 28 STLDKVLSQGFITCGVSTGLPGFSNPNAKGDWEGIDVEYCQALAAAVLGDKTKVKFVPLT 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K G+ S +L Sbjct: 88 AKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKDLGVKSAKELD 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+CVQ+GTTTEL LADYF+ MKY P+VF+ + + A RCD T D S LYAL Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMKYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L ++P V+LP+IISK PL P + Q D +W+N+ WT YAMV AEE GIT KN++++ Sbjct: 208 RLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWTLYAMVNAEEYGITSKNVDEM 267 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K + NP+V+R LG+D G LG+ DW+Y+I++ +GNYGE F+R +G S L+I R Sbjct: 268 MK-SENPEVKRILGLDGPKGTG--LGIRDDWSYQIVKQVGNYGESFERTVGKGSPLQIDR 324 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+ GG MYAPPIR Sbjct: 325 GVNALWNAGGFMYAPPIR 342 >gi|218246879|ref|YP_002372250.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC 8801] gi|257059921|ref|YP_003137809.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] gi|218167357|gb|ACK66094.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8801] gi|256590087|gb|ACV00974.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] Length = 363 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 145/326 (44%), Positives = 216/326 (66%), Gaps = 6/326 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +S + S L IK+RG L CG+N + GF+ V G + G DVD CRA+++A+FDDPSK Sbjct: 43 SSSKVSGSRLATIKERGTLICGVNGEVPGFSFVDEQGQYSGLDVDMCRAIAAALFDDPSK 102 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++Y L+A+ER A+QS ++D+L+RNT WT+ R+ ++G+ F P ++DGQG + K G Sbjct: 103 VEYRKLSAQERLTAVQSGEVDVLNRNTTWTMSRDTAVGMEFAPTVFYDGQGIMATKASGA 162 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHN-MKYHPIVFERVEEIDAAYRAHRCDAYTG 196 +++ L+G SICV AGTTTE LAD + Y+P+V + V+ + AAY+ RC+A T Sbjct: 163 NTLKDLTGKSICVLAGTTTEQNLADQMRKEGVTDYNPVVSDDVDALYAAYQEGRCEAVTS 222 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S L A + + +HVIL ++SK PL P + GD+ WY+ V W +A++ AEE GI Sbjct: 223 DRSQLVARRSIFPKKDDHVILDVVMSKEPLGPVVADGDSTWYDAVKWITFAVIQAEEFGI 282 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 T +N+ + T +P+++RFLGID +GE +GL D+ RII+H+GNYGE+++RN+G Sbjct: 283 TSQNLATF-ESTEDPNIKRFLGIDD--KLGEDMGLPNDFAARIIKHVGNYGEIYERNIGK 339 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 L + RG N LW+ GGL+Y+PP R Sbjct: 340 --PLGLERGQNQLWTNGGLLYSPPFR 363 >gi|33594953|ref|NP_882596.1| amino acid-binding periplasmic protein [Bordetella parapertussis 12822] gi|33565029|emb|CAE39978.1| amino acid-binding periplasmic protein [Bordetella parapertussis] Length = 338 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 148/324 (45%), Positives = 216/324 (66%), Gaps = 4/324 (1%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + L +KKRG + CG TG GF+ G W+G DVD CRA+++A+F D SKI+ Sbjct: 18 AGAQGATLDVVKKRGTVVCGTTTGFAGFSAPDKQGTWRGLDVDLCRAVAAAVFGDASKIK 77 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +PLN+++RF ALQS ++D+L+RNT T R+ +LG+ I ++DGQGF++ K G+ S Sbjct: 78 VVPLNSQQRFTALQSGEVDVLTRNTTVTQQRDTALGIIHAGINFYDGQGFMVPKSLGVKS 137 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 +L+GA+IC+Q GT+ E TLAD+ +A+ + Y P+V E E+ A+ + RCD ++ D S Sbjct: 138 AKELNGATICLQTGTSNENTLADWARANQVSYKPVVIETFNEVVNAFASGRCDVFSTDAS 197 Query: 200 ALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 L +++ ++P ++V+LP+IISK PL P + QGD W NIV W+ AM+ AEE G+T Sbjct: 198 GLASIRISRLEKPDDYVVLPEIISKEPLGPFVRQGDDAWLNIVRWSLSAMIEAEEYGVTT 257 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 N+++ K + NP+V+R LG+ + G LGL + W Y II+ +GNYGE F+RN+G S Sbjct: 258 ANVDEQLK-SENPNVRRILGV--TPGAGANLGLDEKWAYNIIKQVGNYGESFERNVGQGS 314 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 LKI RG NA W +GGLMYA PIR Sbjct: 315 PLKIQRGLNAQWIQGGLMYALPIR 338 >gi|148980390|ref|ZP_01816033.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrionales bacterium SWAT-3] gi|145961262|gb|EDK26574.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrionales bacterium SWAT-3] Length = 342 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 159/318 (50%), Positives = 223/318 (70%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +GFL CG++TGL GF+ + G+W+G DV++C+AL++A+ D +K++Y+PL Sbjct: 28 STLDKVTSQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEYCQALAAAVLGDKTKVKYVPLT 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K G++S +L Sbjct: 88 AKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMVKKDLGLTSALELD 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+CVQ+GTTTEL LADYF+ + M Y P+VF+ + + A RCD T D S LYAL Sbjct: 148 GASVCVQSGTTTELNLADYFRNNGMSYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L P +LP+IISK PL P + Q D +W+N+ WT AMV AEE GI+ KN +++ Sbjct: 208 RLNLADPKSAQVLPEIISKEPLGPVVRQDDDKWFNVAKWTLSAMVNAEEYGISSKNADEM 267 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K + +P+++R LG+D G+ LG+ DW Y++I+ +GNYGE F+R +G S L+I R Sbjct: 268 LK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVIKQVGNYGESFERTVGTGSPLQIDR 324 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+ GG MYAPPIR Sbjct: 325 GVNALWNAGGFMYAPPIR 342 >gi|153011796|ref|YP_001373009.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151563684|gb|ABS17180.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 335 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 153/318 (48%), Positives = 224/318 (70%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 + IK+RG ++CG++ G++GF+ NG W GFDVDFCRA+++A +P K+ Y+PL+ Sbjct: 21 GTVDVIKERGEVRCGVSQGVLGFSVPDKNGVWGGFDVDFCRAVAAATLGNPDKVAYVPLS 80 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 K+RF ALQS ++D+LSR T WTL R+ LG++F + Y+DGQ F+++K+ G+ SV ++S Sbjct: 81 TKDRFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVGVNYYDGQAFMVNKEVGVKSVKEIS 140 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+C + GTTTE +ADYF A+ ++Y I FE+ ++ A+ RCD Y+ D SALYA Sbjct: 141 GASVCTETGTTTEQNMADYFSANKIEYQVIAFEKPDQTIQAFNTGRCDVYSTDASALYAQ 200 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +LT + P V+LP++ISK PL PA+ QGD +W+ IV WT +A++ AEE+GIT++N + Sbjct: 201 RLTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKIVRWTLFALIEAEEMGITKENAASL 260 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 + + +RFLG++ + G+A+GL W Y+ I +GNYGE+F+R+LG S LKI R Sbjct: 261 LE-SGTVAQKRFLGVESEA--GKAMGLDAKWAYQAISAVGNYGEIFERHLGKDSPLKIDR 317 Query: 325 GYNALWSKGGLMYAPPIR 342 G N LWS GGLMYAPP R Sbjct: 318 GLNRLWSDGGLMYAPPAR 335 >gi|260432480|ref|ZP_05786451.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Silicibacter lacuscaerulensis ITI-1157] gi|260416308|gb|EEX09567.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Silicibacter lacuscaerulensis ITI-1157] Length = 356 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 153/342 (44%), Positives = 220/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + I + + A + D+K RG L CG+ TGLVGFA ANG+W+GFD Sbjct: 19 MKKSVI--LGAATIAGLAAGAAAAGTVDDVKARGKLNCGVTTGLVGFAAPDANGEWQGFD 76 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S ++D+L+RNT WT R++ L F Sbjct: 77 VAVCRAVAAAVLGDANAVEFVPTTGKTRFTALASGEVDMLARNTTWTFSRDVDLKFDFVG 136 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+SS +L GA++C+Q GTTTEL LAD+F+++N+ Y P+ E Sbjct: 137 VNYYDGQGFMVPKALGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 196 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T + P +HV+LP+IISK PL P + GD EW ++ Sbjct: 197 EAQQQYLAGACDVYTTDASGLAATRATFENPGDHVLLPEIISKEPLGPLVRHGDNEWGDV 256 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++TAEELGIT NI++++ T NP++ R LG + +GE LGL W R I Sbjct: 257 VRWTLNALITAEELGITSANIDEMASGTENPEINRLLGSE--GTLGEMLGLDAQWALRAI 314 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + GNYGE+F +N+G ++ + + RG NA W+ GGL+Y+PP R Sbjct: 315 KAGGNYGEVFAKNIGEETPIGLARGLNAQWTDGGLLYSPPFR 356 >gi|167041376|gb|ABZ06129.1| putative bacterial extracellular solute-binding protein, family 3 [uncultured marine microorganism HF4000_005K23] Length = 348 Score = 337 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 148/350 (42%), Positives = 217/350 (62%), Gaps = 12/350 (3%) Query: 1 MYKDF--FVSILCLIILFFT-----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M + F +S++ ++ + F + + L + K+ LKCG++ GL GF+ + A Sbjct: 3 MKRTFKHLLSLIAVVAVLFALGTEAMAAKKSKTLKNTIKKDTLKCGVSQGLPGFSNMDAA 62 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+W G DVD CRA+++A+ D K+ ++ L+AKERF AL + +IDILSRNT WTL R+ Sbjct: 63 GNWTGVDVDVCRAVAAAVLGDSGKVTFIALSAKERFTALIAGEIDILSRNTTWTLSRDAD 122 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYH 172 +GL F + ++DGQGF++ K GI+S + G S CV GTTTEL + D+F + + Y Sbjct: 123 IGLTFVGVNFYDGQGFMVRKDSGITSTNDFKSGLSACVNIGTTTELNMRDFFTSKGITYE 182 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 P+VFE+ +E+ AY A RCD YT D S L A + P +H++LP+ ISK PL P + Q Sbjct: 183 PVVFEKADEVKDAYDAGRCDTYTTDKSGLAAQRTKLANPDDHIVLPETISKEPLGPVVRQ 242 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292 GD W +IV W+ M+ AEE GI N + + K + NP ++R +G + +G ALGL Sbjct: 243 GDAVWEDIVRWSLNVMIEAEEYGINSANADSM-KTSKNPQIKRLVGAE--GELGAALGLD 299 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 DW+ RII+ +GNYGE + RN+ + + RG N LW+KGGL+Y PP R Sbjct: 300 NDWSLRIIKQVGNYGESYKRNI-ADTGILPTRGPNELWTKGGLLYVPPAR 348 >gi|84394265|ref|ZP_00992991.1| ABC-type amino acid transport, signal transduction system, periplasmic component/domain [Vibrio splendidus 12B01] gi|86148624|ref|ZP_01066906.1| ABC-type amino acid transport, signal transduction systems,periplasmic component/domain [Vibrio sp. MED222] gi|218709394|ref|YP_002417015.1| amino acid ABC transporter [Vibrio splendidus LGP32] gi|84375104|gb|EAP92025.1| ABC-type amino acid transport, signal transduction system, periplasmic component/domain [Vibrio splendidus 12B01] gi|85833580|gb|EAQ51756.1| ABC-type amino acid transport, signal transduction systems,periplasmic component/domain [Vibrio sp. MED222] gi|218322413|emb|CAV18566.1| Amino acid ABC transporter [Vibrio splendidus LGP32] Length = 342 Score = 337 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 158/318 (49%), Positives = 223/318 (70%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +GFL CG++TGL GF+ + G+W+G DV++C+AL++A+ D +K++Y+PL Sbjct: 28 STLDKVTSQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEYCQALAAAVLGDKTKVKYVPLT 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K+ G++S +L Sbjct: 88 AKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMVKKELGLTSAQELD 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A RCD T D S LYAL Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L P +LP+IISK PL P + Q D +W+N+ WT AM+ AEE GI+ KN +++ Sbjct: 208 RLNLADPKSAQVLPEIISKEPLGPVVRQDDDKWFNVAKWTLSAMINAEEYGISSKNADEM 267 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K + +P+++R LG+D G+ LG+ DW Y++I+ +GNYGE F+R +G S L+I R Sbjct: 268 LK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVIKQVGNYGESFERTVGTGSPLQISR 324 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+ GG MYAPPIR Sbjct: 325 GVNALWNAGGFMYAPPIR 342 >gi|304391889|ref|ZP_07373831.1| general L-amino acid-binding periplasmic protein AapJ [Ahrensia sp. R2A130] gi|303296118|gb|EFL90476.1| general L-amino acid-binding periplasmic protein AapJ [Ahrensia sp. R2A130] Length = 342 Score = 337 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 217/343 (63%), Gaps = 2/343 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M L + T +A+ L D+K +GFL+CG++TG GFA G+W+GFD Sbjct: 1 MKTKLLSLALGAAAIAMTGTVASAATLDDVKAKGFLQCGVSTGFPGFAFTDDAGNWQGFD 60 Query: 61 VDFCRALSSAIF-DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 CRA+++AIF D + +++ P K RF AL S ++D+L+RNT T R++ L F Sbjct: 61 PALCRAMAAAIFAGDSNAVKFTPTTGKTRFTALASGEVDVLARNTTETFSRDVDLKFTFG 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 P+ Y+DGQGF++ K G++S LSGA+ICVQ GTTTEL LADYF+A+NM Y P+ E Sbjct: 121 PVNYYDGQGFMVRKSLGVTSALNLSGATICVQTGTTTELNLADYFRANNMTYEPVPIETN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E Y A+ CDAYT D S L A + + P++H+ILP+IISK PL P + QGD +W + Sbjct: 181 AEAQEKYLANACDAYTTDASGLSATRSAFEAPNDHMILPEIISKEPLGPLVRQGDDQWAD 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 I+ WT A++TAEE G+T N +++ +T+PD+QR LG + G LGL DW Sbjct: 241 ILKWTLLALITAEEKGVTAANADEMKASSTDPDIQRLLGATEDG-FGAMLGLDNDWALNA 299 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ GNYGE+F + LG + + I RG NAL++ GGLMYA PIR Sbjct: 300 IKAGGNYGEIFAKYLGTDTAVGIERGLNALYTDGGLMYAAPIR 342 >gi|313680184|ref|YP_004057923.1| amino acid ABC transporter substrate-binding protein, paat family [Oceanithermus profundus DSM 14977] gi|313152899|gb|ADR36750.1| amino acid ABC transporter substrate-binding protein, PAAT family [Oceanithermus profundus DSM 14977] Length = 339 Score = 337 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 147/324 (45%), Positives = 210/324 (64%), Gaps = 6/324 (1%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQY 80 S L +K+RG L CG+N G GF + GD+ GFDVDFCRA+++AIFDDP+K+ + Sbjct: 19 AQQSRLDVVKQRGKLICGVNGGAPGFGFIDEKTGDYVGFDVDFCRAVAAAIFDDPTKVDF 78 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +PLNAK RF A+Q+ ++D++ RNT T R+ LG+ F P+ ++DGQG ++ K G+ SV Sbjct: 79 VPLNAKVRFNAIQTGKVDVVFRNTTVTTSRDSQLGVDFLPVNFYDGQGVMVKKSLGVKSV 138 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L GA++C AGTTTE D +AHN+ + F+ + A + RCDA T D S Sbjct: 139 YDLKGATVCTNAGTTTEKNWTDVDRAHNLGTKLLTFDDFSKSMAGLESGRCDAVTTDKSG 198 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L K + P VILP+ +SK PLA Q D++W + ++W YA + AEE GITQ N Sbjct: 199 LVGWKAKSKDPESLVILPETLSKEPLAGFTFQNDSKWRDALTWIVYATMQAEEFGITQAN 258 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 ++Q+ K ++NP ++RFLG++ +GE LGLT D+ R+IRH+GNYGE++ R+LG S Sbjct: 259 LDQMLK-SSNPGIRRFLGVES--KLGEGLGLTNDFAARVIRHVGNYGEIYARHLGPDSPF 315 Query: 321 KIPR--GYNALWSKGGLMYAPPIR 342 IPR NAL++ GGL+Y+PP R Sbjct: 316 FIPREGSLNALYTDGGLIYSPPFR 339 >gi|222102263|ref|YP_002546853.1| polar amino acid ABC transport substrate-binding protein, aapJ-2 [Agrobacterium radiobacter K84] gi|221728380|gb|ACM31389.1| polar amino acid ABC transport substrate-binding protein, aapJ-2 [Agrobacterium radiobacter K84] Length = 347 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 135/327 (41%), Positives = 203/327 (62%), Gaps = 4/327 (1%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + + S L IK+RG +K G+ GF ++G W+GF VDF RAL+ IF++P Sbjct: 25 LLPNMANAGSTLDKIKERGVIKVGV-GTTPGFFTPDSSGRWQGFFVDFGRALAVTIFNNP 83 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K+++ + ++R ALQ+ + DIL T+ R LG F P+ ++DGQG ++ K Sbjct: 84 DKVEFTNSSPQQRLPALQAGEFDILLSGVTETITRAFKLGFHFGPVVFYDGQGLLVRKDL 143 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 G++ + L GA+I +Q+GTT EL +AD+F+ K+ P+ E E A + R DA T Sbjct: 144 GVTKGADLDGATIGIQSGTTGELNIADFFRKTGKKFTPVTIEETAEFTKALDSGRVDALT 203 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + L A + +P ++V+LP+ +SK PLAPAI GD +W IV+WT YA + AEE G Sbjct: 204 QDSTDLAAKRTQLKKPDDYVLLPERLSKEPLAPAIRAGDDQWLEIVNWTIYATIQAEEFG 263 Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 IT+ N++ K + +P +QRFLG+D S +G+A+GL + Y II+ +GNYGE+F+RN+G Sbjct: 264 ITKDNVDTFLK-SDDPAIQRFLGVDPS--LGQAIGLDPKFAYNIIKAVGNYGEIFERNVG 320 Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342 + L RG N LW+KGGL+Y+PP R Sbjct: 321 KGTPLNFDRGLNQLWTKGGLIYSPPFR 347 >gi|323139262|ref|ZP_08074316.1| extracellular solute-binding protein family 3 [Methylocystis sp. ATCC 49242] gi|322395483|gb|EFX98030.1| extracellular solute-binding protein family 3 [Methylocystis sp. ATCC 49242] Length = 343 Score = 336 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 156/344 (45%), Positives = 239/344 (69%), Gaps = 5/344 (1%) Query: 1 MYKDFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M++ + L L+I F + + AS L +K+ G L CG++ G+VGF+ G+W G Sbjct: 3 MFQKRVRASLSLLIASFCLLAAPSQASTLDSVKQSGALACGVSNGIVGFSIADDKGNWSG 62 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVDFCRA++SAIF D SK++++P+ +ERF AL+S + D+LSRN+ W E+ GL F Sbjct: 63 FDVDFCRAVASAIFGDASKLRFVPVGTEERFEALKSGKFDLLSRNSTWAFSNEVDQGLIF 122 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 +T++DGQGF++ K + I+S +L+G+ +CV++ TTTE +AD+FK ++M + P+ FE Sbjct: 123 AGVTFYDGQGFLVPKSRKIASALELNGSKVCVKSATTTEANVADFFKQNHMSFEPVRFET 182 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI AY A +C+A + DIS L+A+KL +P++++IL D+ISK PL P + QGD +W Sbjct: 183 LAEIIKAYDAGQCNAISSDISQLHAIKLELKKPADNLILADVISKEPLGPVVRQGDDQWL 242 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 N+V W +AM+ AEELG++ NI Q +K + P V+RF+G + +IG+ LGL+ DW Sbjct: 243 NLVKWVIFAMLNAEELGVSSSNIEQ-AKKSQKPAVRRFIGAE--GDIGKQLGLSPDWALN 299 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I++++GNYGE+ +RN+G +S+L I RG N LWS GG+ YAPP+R Sbjct: 300 IVKNVGNYGEVLERNVGKKSKLGIARGLNQLWSMGGVQYAPPLR 343 >gi|59712139|ref|YP_204915.1| general L-amino acid-binding protein [Vibrio fischeri ES114] gi|59480240|gb|AAW86027.1| general L-amino acid-binding protein [Vibrio fischeri ES114] Length = 342 Score = 336 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 162/345 (46%), Positives = 231/345 (66%), Gaps = 6/345 (1%) Query: 1 MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M F +I L + L ++K G+L+CG++TGL GF+ + G+W+ Sbjct: 1 MKFKTNKLFAAIATSAALLSAPALAASGTLEKVQKNGYLQCGVSTGLPGFSNPNSKGEWE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV+FC+A+++A+ D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL Sbjct: 61 GIDVEFCQAVAAAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLN 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + Y+DGQGF++ K+ G++S +L GAS+CVQ+GTTTEL LADYF+ +NM+Y P+VF+ Sbjct: 121 FVGVNYYDGQGFMVKKELGLTSAKELDGASVCVQSGTTTELNLADYFRNNNMEYKPVVFD 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + A RCD T D S LYAL+L P +LP+IISK PL P + QGD +W Sbjct: 181 TAAQTSKGFDAGRCDVLTTDQSGLYALRLNLKDPKTAQVLPEIISKEPLGPVVRQGDDQW 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 +NI W M+ AEE GI+ KN +Q+ K + +P+++R LG+D G+ LG+ DW Y Sbjct: 241 FNINKWVLNTMINAEEYGISSKNADQMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGY 297 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++++ +GNYGE F+R +G S L+I RG NALW+ GG +YA PIR Sbjct: 298 QVVKQVGNYGESFERTVGEGSPLQISRGVNALWNAGGFVYAAPIR 342 >gi|323698172|ref|ZP_08110084.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. ND132] gi|323458104|gb|EGB13969.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans ND132] Length = 337 Score = 336 bits (861), Expect = 4e-90, Method: Composition-based stats. Identities = 144/342 (42%), Positives = 222/342 (64%), Gaps = 5/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M I +I L + S A L +++ G L G++ G+ GF+ +NG W GFD Sbjct: 1 MK--TLSKIFMVIALLAMAGSALAGTLEKVQQNGELVLGVSEGVAGFSAPDSNGKWAGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A+++A+ +P I+Y+PL +K++ +A+ S Q+D LSR T WT+ R+ G+ F Sbjct: 59 VDMGKAVAAAVLKNPDAIKYVPLASKQKIVAVSSGQVD-LSRGTTWTMKRDCKQGVDFTV 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++DGQG ++ K G++ ++L GAS+ V +GTT+EL +AD+ +A+N+K +VFE + Sbjct: 118 VLFYDGQGLMVKKGLGVTKATELDGASVAVVSGTTSELNVADFARANNIKLETVVFESKK 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AY A R DA+T D+S L +L+ P EH+ILP++ SK PL+P + GD +W ++ Sbjct: 178 EAFNAYVAGRADAFTTDVSQLASLRAGTTNPDEHIILPEVFSKEPLSPFVRHGDQQWKDL 237 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V+W + ++ AEE GITQ N+ ++ +T+P VQR LG + ++G + L DW R I Sbjct: 238 VTWVLFGLIEAEEKGITQANVLEMKAKSTDPVVQRMLGA--TGDVGALIDLDNDWLVRAI 295 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGEM+DRN G +S LKIPRG+N LW+KGGL+YA PIR Sbjct: 296 QAVGNYGEMYDRNFGPKSALKIPRGHNNLWTKGGLIYAMPIR 337 >gi|126728211|ref|ZP_01744027.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Sagittula stellata E-37] gi|126711176|gb|EBA10226.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Sagittula stellata E-37] Length = 336 Score = 335 bits (860), Expect = 4e-90, Method: Composition-based stats. Identities = 144/343 (41%), Positives = 211/343 (61%), Gaps = 8/343 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 MY+ I+ + + + A L ++K RG L CG+NTGLVGFA +NG+W+GFD Sbjct: 1 MYR-----IIGAGLAMLLAGAATAGTLDEVKSRGTLNCGVNTGLVGFASKDSNGEWRGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ DP + ++ A RF AL + +ID+L RNT W+ +I L + F Sbjct: 56 VGLCRAVAAAVLGDPMAVNFVETTAATRFTALNAGEIDLLVRNTTWSFSTDIDLKVDFAG 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y+DGQ F++ K G+SS +L G SICVQAGTT+ L + +YF + M Y + E Sbjct: 116 INYYDGQAFMVPKTLGLSSARELDGRSICVQAGTTSALNVDEYFDRYQMSYEAVPVEGTA 175 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y C+ Y+ D S L A++ T P +HV+L DIISK PL PA+ GD +W +I Sbjct: 176 EAQTLYLEGACEVYSSDASQLAAIRATFGNPGDHVLLEDIISKEPLGPAVRHGDNDWADI 235 Query: 241 VSWTHYAMVTAEELGITQKNINQVSK-DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V WT A++ AEELG+ N++++ T+ P+++R LG++ +GE LGL DW R Sbjct: 236 VRWTLNALIAAEELGVNSANVDELKAQGTSTPEIKRLLGLE--GRMGEMLGLDSDWAVRA 293 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ GNYGE+F RN+G + + + RG N W++GGL+Y+PP R Sbjct: 294 IKAGGNYGELFSRNIGVDTPIGLSRGLNLQWTEGGLLYSPPFR 336 >gi|209966385|ref|YP_002299300.1| general L-amino acid-binding periplasmic protein AapJ [Rhodospirillum centenum SW] gi|209959851|gb|ACJ00488.1| general L-amino acid-binding periplasmic protein AapJ [Rhodospirillum centenum SW] Length = 353 Score = 335 bits (860), Expect = 5e-90, Method: Composition-based stats. Identities = 158/321 (49%), Positives = 222/321 (69%), Gaps = 5/321 (1%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S L IK+RG L+CG+NTGL GF+ + G W G DVD C+A+++A D K+ Y P Sbjct: 37 QQSTLDQIKQRGVLRCGVNTGLAGFSTPDSQGRWTGLDVDVCKAIAAAALGDAGKVHYAP 96 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L+A++R ALQS ++DILSRNT W+L R+ G+ F P+ Y+DGQGF++ K G++S Q Sbjct: 97 LSAQQRLTALQSGEVDILSRNTTWSLSRDT-QGMNFGPVVYYDGQGFMVPKALGVTSAKQ 155 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-AL 201 L GA++CVQ GTTTEL LADYF A+ M + P+V E +E+ AA+ + RCD +T D S Sbjct: 156 LDGATVCVQTGTTTELNLADYFAANRMSFKPVVIESFDEVVAAFFSGRCDVFTTDGSQLA 215 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 ++ P ++VILP+IISK PLAP + GD +W++IV WT YA++ AEE GIT N+ Sbjct: 216 SVRAVSAAAPDDYVILPEIISKEPLAPVVRHGDDQWFDIVKWTVYALLEAEEKGITAANV 275 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 ++ K + +P VQR LG+ +G++LGL W YR I+ +GNYGE+F+RN+G + L+ Sbjct: 276 DEKKK-SADPTVQRLLGVQP--GMGQSLGLDDAWAYRAIKAVGNYGEVFERNVGKATPLR 332 Query: 322 IPRGYNALWSKGGLMYAPPIR 342 + RG NALW+ GGLMYAPP+R Sbjct: 333 LERGLNALWTNGGLMYAPPVR 353 >gi|126724899|ref|ZP_01740742.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacterales bacterium HTCC2150] gi|126706063|gb|EBA05153.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacterales bacterium HTCC2150] Length = 338 Score = 335 bits (860), Expect = 5e-90, Method: Composition-based stats. Identities = 155/342 (45%), Positives = 217/342 (63%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S L I ++ + A L D+K RG L CG+ TGLVGFA A+G W+GFD Sbjct: 1 MKKSVIFS--ALTIAGLSASAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNADGRWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA++ A D + ++++P K RF AL S +ID+L+RNT WTL R+ L F Sbjct: 59 VAVCRAVAVATLGDENAVEFVPTTGKTRFTALASGEIDMLARNTTWTLSRDADLKFTFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF+ K G++S L GA++C+Q GTTTEL LAD+F+++N+ Y P+ E Sbjct: 119 VNYYDGQGFMAPKDLGVASAKDLDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD +T D S L A + T + P++HV+LP+I+SK PL P + GD+EW +I Sbjct: 179 EAQQQYLAGACDVFTTDASGLAATRATFENPADHVLLPEIVSKEPLGPLVRHGDSEWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ AM+TAEELGIT N ++S T NP++ R LG + +GE LGL+ DW II Sbjct: 239 VRWSLNAMITAEELGITSANAAEMSAGTNNPEINRLLGSE--GTLGEMLGLSADWAKNII 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F+ N+G + + + RG N+ W+ GGL+Y+PP R Sbjct: 297 MTQGNYGEVFENNIGENTAIGLSRGLNSQWTDGGLIYSPPFR 338 >gi|254456453|ref|ZP_05069882.1| ABC transporter [Candidatus Pelagibacter sp. HTCC7211] gi|207083455|gb|EDZ60881.1| ABC transporter [Candidatus Pelagibacter sp. HTCC7211] Length = 346 Score = 335 bits (859), Expect = 5e-90, Method: Composition-based stats. Identities = 151/350 (43%), Positives = 223/350 (63%), Gaps = 12/350 (3%) Query: 1 MYKDF--FVSILCLIILFFTS-----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M+K S++ ++ + FT + + L + +K+GF++CG++ GL GF+ A Sbjct: 1 MFKYLKQLTSLVAMVAVLFTFTTETMAAKKSKTLKNTQKKGFVRCGVSQGLPGFSNADAA 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+W G DVD CRA+++A+ D +K+++ PL+AKERF AL S +IDILSRNT WTL R+ Sbjct: 61 GNWTGVDVDVCRAVAAAVLGDANKVKFTPLSAKERFTALTSNEIDILSRNTTWTLSRDAD 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYH 172 +GL F + ++DGQGF++ K G SSV+ +G S C GTTTEL + D+F + + Y Sbjct: 121 IGLTFVGVNFYDGQGFMVRKNSGYSSVNDFKNGISACTNLGTTTELNMRDFFNSKGISYE 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 P+ FE+ +E+ AAY A RCD YT D S L A ++ P +HV+LP+ ISK PL P + Q Sbjct: 181 PVTFEKADEVVAAYDAGRCDTYTTDKSGLAAQRIKLSSPDDHVVLPETISKEPLGPVVRQ 240 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292 GD+ W +IV W+ M+ AEE G+ N + + K + NP V+R +G + +G ALGL Sbjct: 241 GDSVWEDIVRWSLNVMIEAEEYGVNSANADSM-KTSDNPAVKRLVGAE--GELGAALGLD 297 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 DW+ RII+ +GNYGE + RN+ + + RG N LW+KGG++Y PP R Sbjct: 298 NDWSLRIIKQVGNYGESYKRNI-ADTGILPDRGPNELWTKGGILYVPPAR 346 >gi|254477415|ref|ZP_05090801.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Ruegeria sp. R11] gi|214031658|gb|EEB72493.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Ruegeria sp. R11] Length = 338 Score = 335 bits (859), Expect = 5e-90, Method: Composition-based stats. Identities = 155/342 (45%), Positives = 220/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F+ L + + + A L D+K RG L CG+ TGLVGFA ANG+W+GFD Sbjct: 1 MKNKVFLG--ALTVAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VAVCRAVAAAVLGDSTAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y+DGQGF++ K G+SS +L GA++C+Q GTTTEL LAD+F+++N+ Y P+ E Sbjct: 119 INYYDGQGFMVPKDLGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T D P+ HV+LP+IISK PL P + GD EW ++ Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFDDPAGHVLLPEIISKEPLGPLVRHGDHEWGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ A++ AEELG+T NIN+++ T NP++ R LG + +GE LGL+ DW + Sbjct: 239 VRWSLNALIAAEELGVTSANINEMAAGTENPEINRLLGTE--GTLGEMLGLSADWAKNAV 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +N+G + + + RG NA W++GGL+YAPP R Sbjct: 297 AAGGNYGEVFAKNIGEDTPIGLARGLNAQWTEGGLLYAPPFR 338 >gi|254463676|ref|ZP_05077087.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacterales bacterium Y4I] gi|206684584|gb|EDZ45066.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Rhodobacterales bacterium Y4I] Length = 338 Score = 335 bits (859), Expect = 6e-90, Method: Composition-based stats. Identities = 159/342 (46%), Positives = 223/342 (65%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + + + A L D+K RG L CG+ TGLVGFA ANG+W+GFD Sbjct: 1 MKKTVFLG--ALTVAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VAVCRAVAAAVLGDSTAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ G+SS +L GA++C+Q GTTTEL LAD+F+++N+ Y P+ E Sbjct: 119 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T D PS HVILP+IISK PL P + GD EW ++ Sbjct: 179 EAQQQYLAGSCDVYTTDASGLAATRATFDDPSGHVILPEIISKEPLGPLVRHGDHEWGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ A++ AEELGIT NIN+++ T NP++ R LG + N+GE LGL DW + + Sbjct: 239 VRWSLMALIAAEELGITSANINEMAAGTENPEINRLLGSE--GNLGEMLGLNADWAMKAV 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +N+G + + + RG NA W++GGL+YAPP R Sbjct: 297 AAGGNYGEIFAKNIGEDTPVGLARGLNAQWTEGGLLYAPPFR 338 >gi|126659578|ref|ZP_01730709.1| extracellular solute-binding protein, family 3 [Cyanothece sp. CCY0110] gi|126619121|gb|EAZ89859.1| extracellular solute-binding protein, family 3 [Cyanothece sp. CCY0110] Length = 334 Score = 335 bits (859), Expect = 6e-90, Method: Composition-based stats. Identities = 139/324 (42%), Positives = 215/324 (66%), Gaps = 6/324 (1%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + + S L IK+RG L CG+N + GF+ V NG + G DVD CRA+++A+FDDP K++ Sbjct: 16 TTASTSRLDTIKQRGTLICGVNGEVPGFSFVDENGQYSGLDVDICRAIAAALFDDPEKVE 75 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y L+A+ERF A+QS ++D+L+RNT WT+ R+ + G+ F P ++DGQG ++ G+++ Sbjct: 76 YRKLSAQERFPAVQSGEVDVLNRNTTWTISRDTTNGMEFAPTVFYDGQGIMVTTASGVAN 135 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G SICV AGTTTE LAD + + Y+P+ FE V+ + AAY+ RC+ T D Sbjct: 136 MEGLAGKSICVLAGTTTEQNLADQMRKRGIEDYNPVTFEDVDALYAAYQEGRCEGVTADR 195 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S L A + ++H IL ++SK PL PA+ D+ W++ V W ++++ AEELGI Sbjct: 196 SQLVARRSILPNRNDHAILNVVLSKEPLGPAVKNNDSAWFDAVKWITFSLIQAEELGINS 255 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 +NI + + +P+V+RFLG+D +GE +GL D+ R ++H+GNYGE+++RN+G Sbjct: 256 ENIETF-ETSEDPNVRRFLGLDD--KLGEGMGLPNDFAARAVKHVGNYGEVYERNIGE-- 310 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 L + RG N LW++GGL+Y+PP R Sbjct: 311 PLGLDRGQNNLWTEGGLLYSPPFR 334 >gi|291571845|dbj|BAI94117.1| putative ABC transporter substrate-binding protein [Arthrospira platensis NIES-39] Length = 343 Score = 335 bits (859), Expect = 6e-90, Method: Composition-based stats. Identities = 137/325 (42%), Positives = 216/325 (66%), Gaps = 2/325 (0%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + T S L +K RGFL CG++ G+ GF+ V +G++ G DVD C+A+++A+FDDP+ Sbjct: 21 AAGGTGQSRLNVVKNRGFLICGVDGGIPGFSFVDESGEYSGLDVDVCKAVAAALFDDPNA 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +QY L++ ERF A++S ++D+LSRNT WTL R+ S+G+ F P T++DGQG ++ GI Sbjct: 81 VQYRNLDSTERFEAMRSGEVDMLSRNTTWTLSRDTSVGMEFAPTTFYDGQGMMVRADSGI 140 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +++ ++CV+AGTTTEL L D + + + + F++ + AAY RC+ T D Sbjct: 141 TTLEDFQDLAVCVEAGTTTELNLTDNMRERGITFETVTFQQADPAYAAYAEGRCEGMTSD 200 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 S L A + T P++H+IL +SK PL P + D+ W++ V W +A+ AEELGIT Sbjct: 201 KSQLLARRSTLPNPNDHIILDVTMSKEPLGPVTLNNDSAWFDTVKWVTFALFEAEELGIT 260 Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317 Q N+ Q+++ + NP ++RFLG++ ++G +GLT D+ R+I+H+GNY E++DRNLG Sbjct: 261 QANVEQIAQTSENPTIRRFLGVE--GDLGTGMGLTNDFAARVIKHVGNYAEVYDRNLGTG 318 Query: 318 SELKIPRGYNALWSKGGLMYAPPIR 342 S+ +PR N LW+ GGL+++PP R Sbjct: 319 SQFNLPRNENELWTNGGLLFSPPFR 343 >gi|229523536|ref|ZP_04412941.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae bv. albensis VL426] gi|229337117|gb|EEO02134.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae bv. albensis VL426] Length = 342 Score = 335 bits (859), Expect = 6e-90, Method: Composition-based stats. Identities = 162/318 (50%), Positives = 223/318 (70%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +GF+ CG++TGL GF+ A G+W+G DV++C+A+++A+ D +K++++PL Sbjct: 28 STLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEYCQAMAAAVLGDKTKVKFVPLT 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AKERF ALQS +ID+LSRNT WTL R+ +LG F + Y+DGQGF++ K G+ S +L+ Sbjct: 88 AKERFTALQSGEIDVLSRNTTWTLQRDSALGRNFVGVNYYDGQGFMVKKDLGVKSAKELN 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A RCD T D S LYAL Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L ++P V+LP+IISK PL P + Q D +W+N+ W YAMV AEE GIT KN++++ Sbjct: 208 RLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAMVNAEEYGITSKNVDEM 267 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K + NP+V R LG D G LG+ DW+Y+I++ +GNYGE FDR +G S LKI R Sbjct: 268 MK-SDNPEVMRILGRDGPKGTG--LGIRDDWSYQIVKQVGNYGESFDRTVGAGSPLKIDR 324 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+ GG MYAPPIR Sbjct: 325 GVNALWNAGGFMYAPPIR 342 >gi|172037183|ref|YP_001803684.1| extracellular solute-binding protein [Cyanothece sp. ATCC 51142] gi|171698637|gb|ACB51618.1| extracellular solute-binding protein, family 3 [Cyanothece sp. ATCC 51142] Length = 349 Score = 335 bits (859), Expect = 6e-90, Method: Composition-based stats. Identities = 139/324 (42%), Positives = 214/324 (66%), Gaps = 6/324 (1%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + S L IK+RG L CG+N + GF+ V NG + G DVD CRA+++A+FDDP K++ Sbjct: 31 TTATTSRLDTIKQRGTLICGVNGEVPGFSFVDENGQYSGLDVDICRAIAAALFDDPEKVE 90 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y L+A+ERF A+QS ++D+L+RNT WT+ R+ + G+ F P ++DGQG ++ G++ Sbjct: 91 YRKLSAQERFPAVQSGEVDVLNRNTTWTISRDTTNGMEFAPTVFYDGQGIMVTTASGVAD 150 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G SICV AGTTTE LAD + + Y+P+ FE V+ + AAY+ RC+ T D Sbjct: 151 MEGLAGKSICVLAGTTTEQNLADQMRKRGIEDYNPVTFEDVDALYAAYQEGRCEGVTADR 210 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S L A + ++H IL ++SK PL PA+ D+ W++ V W ++++ AEELGI Sbjct: 211 SQLVARRSILPNRNDHAILNVVLSKEPLGPAVKNNDSAWFDAVKWITFSLIQAEELGINS 270 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 +NI + + +P+V+RFLG+D +GE +GL D+ R+++H+GNYGE+++RN+G Sbjct: 271 QNIATF-ETSEDPNVRRFLGLDD--KLGEGMGLPNDFAARVVKHVGNYGEVYERNIGE-- 325 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 L + RG N LW++GGL+Y+PP R Sbjct: 326 PLGLDRGPNNLWTEGGLLYSPPFR 349 >gi|119946443|ref|YP_944123.1| ABC amino acid transporter extracellular solute-binding protein, family 3 [Psychromonas ingrahamii 37] gi|119865047|gb|ABM04524.1| ABC amino acid transporter extracellular solute-binding protein, family 3 [Psychromonas ingrahamii 37] Length = 337 Score = 335 bits (859), Expect = 6e-90, Method: Composition-based stats. Identities = 163/321 (50%), Positives = 229/321 (71%), Gaps = 3/321 (0%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +AS L ++ K+G + CGI+TG+ GF+ + G W+G DVDFC+++++A+F D SK++Y+ Sbjct: 20 ASASTLEEVVKKGDISCGISTGIAGFSSTDSKGVWEGLDVDFCKSVAAAVFGDASKVKYI 79 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 PL AKERF ALQS +ID+LSR T WT R+ SLGL F + Y+DGQGF+++KK G++S Sbjct: 80 PLTAKERFTALQSGEIDVLSRATTWTATRDTSLGLNFAGVNYYDGQGFLVNKKIGVTSAK 139 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +LSGA+ C+QAGTT+EL L DYF+A+NM+Y + ++ + +++ RCD T D S L Sbjct: 140 ELSGATFCIQAGTTSELNLTDYFQANNMEYRAVTYDTSGQTINGFKSGRCDVITSDASQL 199 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 Y LKL D P ++LP+IISK PL P + QGD EW+NIV WT +A + AEELG++ N+ Sbjct: 200 YGLKLKLDDPDSAIVLPEIISKEPLGPVVRQGDDEWFNIVRWTMFATLEAEELGVSSANV 259 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 + + K + NP + R LG KS GE LGL DW Y+I++ +GNYGEMFD+N+G S L Sbjct: 260 DAMLK-SENPSIMRLLG--KSGTAGENLGLKGDWVYQIVKQVGNYGEMFDKNVGKDSPLN 316 Query: 322 IPRGYNALWSKGGLMYAPPIR 342 I RG N LW++GGLMY+ PIR Sbjct: 317 IDRGLNKLWNQGGLMYSMPIR 337 >gi|297624238|ref|YP_003705672.1| family 3 extracellular solute-binding protein [Truepera radiovictrix DSM 17093] gi|297165418|gb|ADI15129.1| extracellular solute-binding protein family 3 [Truepera radiovictrix DSM 17093] Length = 339 Score = 335 bits (858), Expect = 7e-90, Method: Composition-based stats. Identities = 150/342 (43%), Positives = 220/342 (64%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F S LC++I FT L +++ RG L CG+N L GF V G+ +GFD Sbjct: 1 MRKWFVGSALCVLIASFTVAQAQGK-LAEVRNRGSLVCGVNDVLPGFGTVNEEGEHEGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFC+A+++A+ D + Y PL+A+ERF A+Q+ ++D+L RNT WT R+ +GL F P Sbjct: 60 VDFCKAIAAAVLGDADAVTYRPLSAQERFTAVQTGEVDVLIRNTTWTSSRDTEVGLNFGP 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++DGQGF++ + GI S+ L G I VQ+GTTTEL LAD A +++Y P++FE + Sbjct: 120 VIFYDGQGFMVRRDSGIESLEDLEGRRIGVQSGTTTELNLADVMSALDIQYEPVIFETSD 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ AAY DA+T D S L +L ++ P EH IL ISK PLAPA++ GD EWY++ Sbjct: 180 QLVAAYDDGAVDAWTTDKSGLASLLISLSDPEEHRILDATISKEPLAPAVLHGDDEWYDV 239 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W + ++ AEE GIT +N+ ++++ +TNP++QR LG + S+ E +GL D I Sbjct: 240 VKWVIFGLMEAEEYGITSENVRELAETSTNPNIQRILGAEPSAV--EQIGLEADAIATAI 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+++RNLG + IPRG NA + +GGL+Y P R Sbjct: 298 EAVGNYGEIYERNLGEGTPFNIPRGLNAQYYEGGLIYGMPFR 339 >gi|163740274|ref|ZP_02147668.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis 2.10] gi|161386132|gb|EDQ10507.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis 2.10] Length = 338 Score = 334 bits (857), Expect = 9e-90, Method: Composition-based stats. Identities = 155/342 (45%), Positives = 219/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L + + + A L D+K RG L CG+ TGLVGFA ANG+W+GFD Sbjct: 1 MKNKVILG--ALTVAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VAVCRAVAAAVLGDSTAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ G+SS +L GA++C+Q GTTTEL LAD+F+++N+ Y P+ E Sbjct: 119 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T D PS HV+LP+IISK PL P + GD EW ++ Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFDDPSAHVLLPEIISKEPLGPLVRHGDHEWGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ A+V AEELG+T NI +++ T NP++ R LG + +GE LGL+ DW I Sbjct: 239 VRWSLNALVAAEELGVTSANIGEMAAGTENPEINRLLGTE--GTLGEMLGLSADWAKNAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +N+G + + + RG NA W++GGL+YAPP R Sbjct: 297 GAGGNYGEVFAKNIGEDTPIGLARGLNAQWTEGGLLYAPPFR 338 >gi|163739481|ref|ZP_02146891.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Phaeobacter gallaeciensis BS107] gi|161387234|gb|EDQ11593.1| glutamate/glutamine/aspartate/asparagine-binding protein BztA precursor [Phaeobacter gallaeciensis BS107] Length = 338 Score = 334 bits (857), Expect = 9e-90, Method: Composition-based stats. Identities = 156/342 (45%), Positives = 219/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L I + + A L D+K RG L CG+ TGLVGFA ANG+W+GFD Sbjct: 1 MKNKVILG--ALTIAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VAVCRAVAAAVLGDSTAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ G+SS +L GA++C+Q GTTTEL LAD+F+++N+ Y P+ E Sbjct: 119 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T D PS HV+LP+IISK PL P + GD EW ++ Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFDDPSAHVLLPEIISKEPLGPLVRHGDHEWGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ A+V AEELG+T NI +++ T NP++ R LG + +GE LGL+ DW I Sbjct: 239 VRWSLNALVAAEELGVTSANIGEMAAGTENPEINRLLGTE--GTLGEMLGLSADWAKNAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +N+G + + + RG NA W++GGL+YAPP R Sbjct: 297 GAGGNYGEVFAKNIGEDTPIGLARGLNAQWTEGGLLYAPPFR 338 >gi|259415913|ref|ZP_05739833.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Silicibacter sp. TrichCH4B] gi|259347352|gb|EEW59129.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Silicibacter sp. TrichCH4B] Length = 378 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 158/342 (46%), Positives = 220/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F L + + + A L D+K R L CG++TGLVGF+ ANG+W+GFD Sbjct: 41 MNNSVFFG--ALTVAGLAAGAAAAGTLDDVKARDKLNCGVSTGLVGFSAPNANGEWEGFD 98 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + CRA+++A+ DPSK++Y+P K RF AL S ++D+L+RNT WT R++ L F Sbjct: 99 IAVCRAVAAAVLGDPSKVEYVPTTGKTRFTALASGEVDVLARNTTWTFSRDVDLKFEFIG 158 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ G+SS +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+ E Sbjct: 159 VNYYDGQGFMIPKELGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 218 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T D PS HVILP+IISK PL P + GD EW ++ Sbjct: 219 EARQQYLAGACDVYTTDASGLAATRATFDDPSNHVILPEIISKEPLGPLVRHGDNEWGDV 278 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A+V AEELGIT N+++ + T NP++ R LG + N+GE LGL DW + + Sbjct: 279 VRWTLNALVAAEELGITSANMSEKAAGTDNPEINRLLGSE--GNLGEMLGLDADWAQKAL 336 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F + +G + + + RG NA W+ GGL+YAPP R Sbjct: 337 AAGGNYGEIFAKTIGEDTPVGLARGLNAQWTDGGLLYAPPFR 378 >gi|83854941|ref|ZP_00948471.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Sulfitobacter sp. NAS-14.1] gi|83941464|ref|ZP_00953926.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Sulfitobacter sp. EE-36] gi|83842784|gb|EAP81951.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Sulfitobacter sp. NAS-14.1] gi|83847284|gb|EAP85159.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Sulfitobacter sp. EE-36] Length = 347 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 157/342 (45%), Positives = 219/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F L + + + AS L D+K RG L CG+ TGL GFA ANG+W+GFD Sbjct: 10 MNKSVFFG--ALTVAGLAAGAAAASTLDDVKARGKLNCGVTTGLAGFAAPNANGEWEGFD 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ DP+ ++++P K RF AL S +ID L+RNT WT R++ L F Sbjct: 68 VAVCRAVAAAVLGDPAAVEFIPTTGKTRFTALASGEIDFLARNTTWTFSRDVDLKFDFIG 127 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ G+SS L GA++C+Q GTTTEL LAD+F+ +N+ Y P+ E Sbjct: 128 VNYYDGQGFMVPKELGVSSAKDLDGATVCIQTGTTTELNLADFFRNNNISYEPVPVETNA 187 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T + P EH+ILP+IISK PL P + GD +W ++ Sbjct: 188 EGQQQYLAGACDTYTTDASGLAATRATFENPGEHIILPEIISKEPLGPLVRHGDNDWGDV 247 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 W YA++ AEELG+T N+ +++ +TTNP+V R LG + +GE LGL DW + I Sbjct: 248 TRWVLYALIAAEELGVTSANVEEMTTNTTNPEVARLLGTE--GTLGEMLGLEADWAKKAI 305 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +N+G ++ + + RG NA W+ GGLMYAPP R Sbjct: 306 ASQGNYGEIFAKNIGEETPIGLARGLNAQWTDGGLMYAPPFR 347 >gi|126737042|ref|ZP_01752777.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseobacter sp. SK209-2-6] gi|126721627|gb|EBA18330.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseobacter sp. SK209-2-6] Length = 338 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 155/342 (45%), Positives = 222/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F+ L + + + A L D+K RG L CG+ TGLVGFA ANG+W+GFD Sbjct: 1 MKNTVFLG--ALTVAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A D + ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VAVCRAVAAAALGDSTAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFTG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ G+SS +L GA++C+Q GTTTEL LAD+F+++N+ Y P+ E Sbjct: 119 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T D P++HV+LP+IISK PL P + GD EW ++ Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFDAPADHVLLPEIISKEPLGPLVRHGDHEWGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++TAEELG+T NI ++S T+NP++ R LG + +GE LGL+ DW + Sbjct: 239 VRWTLNALITAEELGVTSANIAEMSAGTSNPEINRLLGTE--GTLGEMLGLSADWGKNAV 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +N+G + + + RG NA W++GGL+Y+PP R Sbjct: 297 AAGGNYGEVFAKNIGEDTPIGLARGLNAQWTEGGLLYSPPFR 338 >gi|89110028|ref|AP_003808.1| predicted amino-acid transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|170082796|ref|YP_001732116.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|218702040|ref|YP_002409669.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia coli IAI39] gi|254163203|ref|YP_003046311.1| putative amino-acid transporter subunit [Escherichia coli B str. REL606] gi|606209|gb|AAA58072.1| ORF_o305; frameshift upstream would extend start [Escherichia coli str. K-12 substr. MG1655] gi|85676059|dbj|BAE77309.1| predicted amino-acid transporter subunit [Escherichia coli str. K12 substr. W3110] gi|169890631|gb|ACB04338.1| predicted amino-acid transporter subunit; periplasmic-binding component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|218372026|emb|CAR19884.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI39] gi|242378802|emb|CAQ33594.1| yhdW, subunit of YhdW/YhdX/YhdY/YhdZ ABC transporter [Escherichia coli BL21(DE3)] gi|253975104|gb|ACT40775.1| predicted amino-acid transporter subunit [Escherichia coli B str. REL606] gi|253979260|gb|ACT44930.1| predicted amino-acid transporter subunit [Escherichia coli BL21(DE3)] gi|309703687|emb|CBJ03028.1| Putative ABC transporter, substrate-binding protein [Escherichia coli ETEC H10407] gi|315137851|dbj|BAJ45010.1| extracellular solute-binding protein [Escherichia coli DH1] Length = 305 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 149/305 (48%), Positives = 214/305 (70%), Gaps = 2/305 (0%) Query: 38 CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++ Sbjct: 3 CGISDGLPGFSYADADGKFSGIDVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT TE Sbjct: 63 DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 L +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E ++L Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL 182 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ L Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242 Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337 G + + G+ L L W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y Sbjct: 243 GKE--GDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300 Query: 338 APPIR 342 APP+R Sbjct: 301 APPVR 305 >gi|281180310|dbj|BAI56640.1| amino acid ABC transporter substrate binding component [Escherichia coli SE15] Length = 305 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 149/305 (48%), Positives = 214/305 (70%), Gaps = 2/305 (0%) Query: 38 CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++ Sbjct: 3 CGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT TE Sbjct: 63 DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 L +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E ++L Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPTEWIVL 182 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ L Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242 Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337 G + + G+ L L W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y Sbjct: 243 GKE--GDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300 Query: 338 APPIR 342 APP+R Sbjct: 301 APPVR 305 >gi|152998090|ref|YP_001342925.1| extracellular solute-binding protein [Marinomonas sp. MWYL1] gi|150839014|gb|ABR72990.1| extracellular solute-binding protein family 3 [Marinomonas sp. MWYL1] Length = 339 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 142/342 (41%), Positives = 214/342 (62%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +I+ +L ++ A L ++K RG +KCGI+ G GF+ G+W G D Sbjct: 1 MKKLIATAIIGAGVLSASASVYAADKLEEVKARGVMKCGIHPGKAGFSTPDTKGNWTGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ C+A+++A+F D SK++++ +N++ R AL + +ID+L+R+T +T R+ G+ Sbjct: 61 VELCKAVAAAVFGDASKVEFITMNSRNRLTALVTDEIDMLARSTTFTATRDGLNGVDVTT 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ++DGQ ++ K+ G++S+ +L GA+IC GTT+E + DYF++ + Y ++ E Sbjct: 121 PWFYDGQALMVKKELGVNSIEELDGATICTYPGTTSEKNINDYFESRGLSYKALIVEGSA 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AAY A+RCDA T D SAL A + PS +VILP+ ISK PL + QG+ EW + Sbjct: 181 ESTAAYLANRCDAVTNDASALAADRQGMPDPSANVILPERISKEPLGAYVKQGNDEWRQV 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V+WT A++ AEE GITQ N+++ K T PDV R LG + ++G+ GL W Y I Sbjct: 241 VTWTAMALIEAEEQGITQSNVDEKLKSTK-PDVMRLLGTE--GSLGKNFGLDDKWAYNAI 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE+FDRNLG S LK RG N L++KGGL+YA P R Sbjct: 298 KAVGNYGEIFDRNLGKDSALKFDRGLNNLYTKGGLLYAYPFR 339 >gi|71083646|ref|YP_266366.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1062] gi|71062759|gb|AAZ21762.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1062] Length = 346 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 150/350 (42%), Positives = 221/350 (63%), Gaps = 12/350 (3%) Query: 1 MYK--DFFVSILCLIILFFTS-----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M+K S++ ++ + FT + + L + +K+GF++CG++ GL GF+ A Sbjct: 1 MFKYVKQLTSLVAMVAVLFTFTTETMAAKKSKTLKNTQKKGFVRCGVSQGLPGFSNADAA 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+W G DVD CRA+++A+ D +K+++ PL+AKERF AL S +IDILSRNT WTL R+ Sbjct: 61 GNWTGVDVDVCRAVAAAVLGDANKVKFTPLSAKERFTALTSGEIDILSRNTTWTLSRDAD 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYH 172 +GL F + ++DGQGF++ K GI+S SQ +G S C GTTTEL + D+F + + Y Sbjct: 121 IGLTFVGVNFYDGQGFMVRKDSGITSTSQFKNGISACTNIGTTTELNMRDFFNSKGISYE 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 P+ FE+ +E+ AAY + RCD YT D S L A + P +HV+LP+ ISK PL P + Q Sbjct: 181 PVAFEKADEVVAAYDSGRCDTYTTDKSGLAAQRTKMTNPDDHVVLPETISKEPLGPVVRQ 240 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292 GD W +IV W+ M+ AEE GI N + + K + NP ++R +G + +G A GL Sbjct: 241 GDAVWEDIVRWSLNVMIEAEEYGINSANAD-MMKTSENPQIKRLVGSE--GELGAAFGLD 297 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 DW+ RII+ +GNYGE + RN+ + + RG N +W+KGGL+Y PP R Sbjct: 298 NDWSLRIIKQVGNYGESYKRNI-ADTGILPDRGPNQIWTKGGLLYVPPAR 346 >gi|311109272|ref|YP_003982125.1| general L-amino acid-binding periplasmic protein AapJ 5 [Achromobacter xylosoxidans A8] gi|310763961|gb|ADP19410.1| general L-amino acid-binding periplasmic protein AapJ 5 [Achromobacter xylosoxidans A8] Length = 338 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 144/318 (45%), Positives = 216/318 (67%), Gaps = 4/318 (1%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +++RG + CG TG GF+ A G W+G DVD CRA+++A+F D +KI+ +PLN+ Sbjct: 24 TLDVVRQRGAVACGTTTGFAGFSAPDAQGKWQGLDVDLCRAIAAAVFGDANKIKVVPLNS 83 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ++RF ALQS ++D+L+RNT T R+ +LG+ I ++DGQGF++ K G+ S +++G Sbjct: 84 QQRFTALQSGEVDVLTRNTTVTQQRDTALGIIHAGINFYDGQGFLVPKSLGVKSAKEING 143 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 A+IC+Q GT+ E TLAD+ +A+N+ Y P+V E E+ A+ A RCD ++ D S L +++ Sbjct: 144 ATICLQTGTSNENTLADWARANNVSYKPVVIETFNEVVNAFAAGRCDVFSTDASGLASIR 203 Query: 206 -LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 P ++V+LP+IISK PL P + QGD W NIV W+ AM+ AEE G++ N+++ Sbjct: 204 ISKLQNPDDYVVLPEIISKEPLGPFVRQGDDAWLNIVRWSLSAMIEAEEYGVSSANVDEQ 263 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 +K + NP+++R LG+ G LGL + W Y I++ +GNYGE F+RN+G S LKI R Sbjct: 264 AK-SANPNIKRILGVTPGG--GANLGLDEKWAYNIVKQVGNYGESFERNVGQGSPLKIKR 320 Query: 325 GYNALWSKGGLMYAPPIR 342 G NA W++GGLMYA PIR Sbjct: 321 GLNAQWTQGGLMYALPIR 338 >gi|262277476|ref|ZP_06055269.1| general L-amino acid-binding periplasmic protein AapJ [alpha proteobacterium HIMB114] gi|262224579|gb|EEY75038.1| general L-amino acid-binding periplasmic protein AapJ [alpha proteobacterium HIMB114] Length = 347 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 157/350 (44%), Positives = 226/350 (64%), Gaps = 11/350 (3%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M + L ++ T+ S L K +GF+KCG++ G+ GF+ A+ Sbjct: 1 MKNIMKAIGSLSVLAFVLTACGDGGGAKKTTSTLDTTKSQGFVKCGVSQGVPGFSNADAS 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+W G DVD CRA+++A+ D SK++Y L+AKERF ALQ+ +IDILSRNT WTL R+ S Sbjct: 61 GNWTGIDVDVCRAVAAAVLGDASKVKYTGLSAKERFTALQAGEIDILSRNTTWTLERDAS 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYH 172 +GL F + ++DGQGF++ K G+ SV+ +G +C GTTTEL +AD+FK+ +KY Sbjct: 121 IGLTFVGVNFYDGQGFMVRKSTGLKSVNDFKNGVKVCTNLGTTTELNMADFFKSKGVKYE 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 P+VFE+ +E+ AY A RCD YT D SAL A P+EHV+LP+ ISK PL P + Q Sbjct: 181 PVVFEKADEVVQAYDAGRCDTYTTDKSALAAQSTKMKDPTEHVVLPETISKEPLGPVVRQ 240 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292 GD++W ++V W+ + AEE G+ NI+ + K++ NP +QR +G + + N GEALGL Sbjct: 241 GDSKWEDVVRWSLNVFIEAEEYGVNSGNIDSM-KESKNPAIQRIVGAEGTKN-GEALGLD 298 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 W+YRII+ +GNYGE + RNL + + RG N LW+KGG++Y PP+R Sbjct: 299 NQWSYRIIKQIGNYGESYKRNL-ADTNIMPERGPNQLWTKGGILYVPPVR 347 >gi|15803803|ref|NP_289837.1| putative periplasmic binding transport protein [Escherichia coli O157:H7 EDL933] gi|209920741|ref|YP_002294825.1| amino acid ABC transporter substrate binding component [Escherichia coli SE11] gi|218555833|ref|YP_002388746.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia coli IAI1] gi|218696968|ref|YP_002404635.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|218706883|ref|YP_002414402.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia coli UMN026] gi|12517899|gb|AAG58397.1|AE005554_8 putative periplasmic binding transport protein [Escherichia coli O157:H7 str. EDL933] gi|13363614|dbj|BAB37564.1| putative periplasmic binding transport protein [Escherichia coli O157:H7 str. Sakai] gi|209757458|gb|ACI77041.1| putative periplasmic binding transport protein [Escherichia coli] gi|209757460|gb|ACI77042.1| putative periplasmic binding transport protein [Escherichia coli] gi|209757462|gb|ACI77043.1| putative periplasmic binding transport protein [Escherichia coli] gi|209757464|gb|ACI77044.1| putative periplasmic binding transport protein [Escherichia coli] gi|209757466|gb|ACI77045.1| putative periplasmic binding transport protein [Escherichia coli] gi|209914000|dbj|BAG79074.1| amino acid ABC transporter substrate binding component [Escherichia coli SE11] gi|218353700|emb|CAU99962.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|218362601|emb|CAR00226.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI1] gi|218433980|emb|CAR14897.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli UMN026] Length = 305 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 149/305 (48%), Positives = 214/305 (70%), Gaps = 2/305 (0%) Query: 38 CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++ Sbjct: 3 CGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT TE Sbjct: 63 DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 L +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E ++L Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL 182 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ L Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242 Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337 G + + G+ L L W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y Sbjct: 243 GKE--GDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300 Query: 338 APPIR 342 APP+R Sbjct: 301 APPVR 305 >gi|152989661|ref|YP_001346638.1| putative amino acid-binding protein [Pseudomonas aeruginosa PA7] gi|150964819|gb|ABR86844.1| probable amino acid-binding protein [Pseudomonas aeruginosa PA7] Length = 341 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 153/323 (47%), Positives = 230/323 (71%), Gaps = 2/323 (0%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + + L +K++G+L+CG++ GL GF+ A G ++G DVDFCRAL++A+F D K++ Sbjct: 21 TAQAGATLDAVKRKGYLQCGVSDGLAGFSYADAKGRYQGLDVDFCRALAAALFGDAGKVR 80 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + PL+ ERF ALQS +D+LSRNT WT R+ +LG+ F +TYFDGQGF+++++ G+SS Sbjct: 81 FTPLSTTERFSALQSGTVDLLSRNTSWTSARDTALGIHFTGVTYFDGQGFLVNRRLGVSS 140 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 +L A++C+Q+GTT EL +ADYF+AH ++Y ++ + E+ A A +CD + D S Sbjct: 141 ARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYEKSARALEAGQCDVLSSDQS 200 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 LYA +L +P ++V+LP++ISK PL PA+ QGD W+NIV WT Y ++ AEELG+T Sbjct: 201 QLYAQRLKLAKPEQYVVLPEVISKEPLGPAVRQGDEAWFNIVRWTLYGLLNAEELGVTSS 260 Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319 N+ + ++D+ NPDV R LG + ++G+ L L +DW +++R +GNYGE+F RN+G+ S Sbjct: 261 NVERQARDSRNPDVARLLGSE--GDVGKDLQLPRDWVVQMVRQVGNYGEIFARNVGDGSP 318 Query: 320 LKIPRGYNALWSKGGLMYAPPIR 342 LK+PRG NA W+ GGL YAPPIR Sbjct: 319 LKMPRGLNAQWNLGGLHYAPPIR 341 >gi|328950982|ref|YP_004368317.1| ABC-type transporter, periplasmic subunit family 3 [Marinithermus hydrothermalis DSM 14884] gi|328451306|gb|AEB12207.1| ABC-type transporter, periplasmic subunit family 3 [Marinithermus hydrothermalis DSM 14884] Length = 341 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 140/338 (41%), Positives = 215/338 (63%), Gaps = 7/338 (2%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67 +L ++L S + + +RG L CG+N GF + G ++GFD+DFCRA+ Sbjct: 7 LLVAVLLVGALGFAQQSRMDVVLERGKLVCGVNNVAPGFGFLNEQTGRFEGFDIDFCRAV 66 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++A+FDDP ++Y+PL AK RF A+Q+ ++D++ RNT T+ R+ S+G+ F P+ ++DGQ Sbjct: 67 AAALFDDPDAVEYVPLTAKARFSAIQTGEVDVVFRNTTITVSRDSSVGVDFLPVNFYDGQ 126 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK-YHPIVFERVEEIDAAY 186 G ++ K+ G++SV +L GA++C GTTTE D+ +A + + FE ++ A+ Sbjct: 127 GVMVKKELGVTSVFELEGATVCTNQGTTTEKNWTDFVRAQGWQGGQLLTFEDFSKVFNAF 186 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + RCDA T D S L K P E VILP+ ISK PLA Q D++W + ++W Y Sbjct: 187 ISGRCDAATTDKSGLAGWKAQASNPDEIVILPETISKEPLAGFTFQNDSKWRDALTWIVY 246 Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306 A++ AEE GIT +N+++ K + +P ++RFLG++ GE LGL D+ RI+RH+GNY Sbjct: 247 ALIQAEEFGITSENVDEFLK-SDSPAIRRFLGVE--GKFGEDLGLPNDFVVRILRHVGNY 303 Query: 307 GEMFDRNLGNQSELKIPR--GYNALWSKGGLMYAPPIR 342 GE++DR+LG +S IPR N LW++GGL+YAPP R Sbjct: 304 GEIYDRHLGPESPFYIPREGSLNELWTRGGLLYAPPFR 341 >gi|218550552|ref|YP_002384343.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia fergusonii ATCC 35469] gi|218358093|emb|CAQ90739.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia fergusonii ATCC 35469] Length = 305 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 148/305 (48%), Positives = 214/305 (70%), Gaps = 2/305 (0%) Query: 38 CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++ Sbjct: 3 CGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT TE Sbjct: 63 DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 L +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E ++L Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL 182 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 P++ISK PL P + +GD EW++IV WT +AM+ AEE+G+ +N+++ + + PD+ L Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGVNSQNVDEKAANPATPDMAHLL 242 Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337 G + + G+ L L W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y Sbjct: 243 GKE--GDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300 Query: 338 APPIR 342 APP+R Sbjct: 301 APPVR 305 >gi|91763314|ref|ZP_01265278.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1002] gi|91717727|gb|EAS84378.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1002] Length = 346 Score = 333 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 148/350 (42%), Positives = 220/350 (62%), Gaps = 12/350 (3%) Query: 1 MYK--DFFVSILCLIILFFTS-----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M+K S++ ++ + F + + L + +K+GF++CG++ GL GF+ A Sbjct: 1 MFKYVKQLTSLVAMVAVLFAFTTETMAAKKSKTLKNTQKKGFVRCGVSQGLPGFSNADAA 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+W G DVD CRA+++A+ D +K+++ PL+AKERF AL S +IDILSRNT WTL R+ Sbjct: 61 GNWTGVDVDVCRAVAAAVLGDANKVKFTPLSAKERFTALTSGEIDILSRNTTWTLSRDAD 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYH 172 +GL F + ++DGQGF++ K GI+S SQ +G S C GTTTEL + D+F + + Y Sbjct: 121 IGLTFVGVNFYDGQGFMVRKDSGITSTSQFKNGISACTNIGTTTELNMRDFFNSKGISYE 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 P+ FE+ +E+ AAY + RCD YT D S L A + P +H++LP+ ISK PL P + Q Sbjct: 181 PVAFEKADEVVAAYDSGRCDTYTTDKSGLAAQRTKMTNPDDHIVLPETISKEPLGPVVRQ 240 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292 GD W +IV W+ M+ AEE GI N + + K + NP ++R +G + +G A GL Sbjct: 241 GDAVWEDIVRWSLNVMIEAEEYGINSANAD-MMKTSENPQIKRLVGSE--GELGAAFGLD 297 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 DW+ RII+ +GNYGE + RN+ + + RG N +W+KGGL+Y PP R Sbjct: 298 NDWSLRIIKQVGNYGESYKRNI-ADTGILPDRGPNQIWTKGGLLYVPPAR 346 >gi|74313796|ref|YP_312215.1| putative periplasmic binding transport protein [Shigella sonnei Ss046] gi|73857273|gb|AAZ89980.1| putative periplasmic binding transport protein [Shigella sonnei Ss046] Length = 305 Score = 333 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 148/305 (48%), Positives = 213/305 (69%), Gaps = 2/305 (0%) Query: 38 CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++ Sbjct: 3 CGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 D+LSRNT WT R+ +G+AF +T +DG GF+ H K G+ S +L GA++C+QAGT TE Sbjct: 63 DLLSRNTTWTSSRDAGMGMAFTGVTDYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 L +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E ++L Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL 182 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ L Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242 Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337 G + + G+ L L W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y Sbjct: 243 GKE--GDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300 Query: 338 APPIR 342 APP+R Sbjct: 301 APPVR 305 >gi|293602358|ref|ZP_06684804.1| ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292819120|gb|EFF78155.1| ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 358 Score = 333 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 145/318 (45%), Positives = 217/318 (68%), Gaps = 4/318 (1%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + +++RG + CG TG GF+ A G W+G DVD CRA+++A+F D +KI+ +PLN+ Sbjct: 44 TVDVVRQRGAVACGTTTGFAGFSAPDAQGKWQGLDVDLCRAIAAAVFGDANKIKVVPLNS 103 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ++RF ALQS ++D+L+RNT T R+ +LG+ I ++DGQGF++ K G+ S +++G Sbjct: 104 QQRFTALQSGEVDVLTRNTTVTQQRDTALGIIHAGINFYDGQGFLVPKSLGVKSAKEING 163 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 A+IC+Q GT+ E TLAD+ +A+N+ Y P+V E E+ A+ A RCD ++ D S L +++ Sbjct: 164 ATICLQTGTSNENTLADWARANNVTYKPVVIETFNEVVNAFAAGRCDVFSTDASGLASIR 223 Query: 206 -LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 P ++V+LP+IISK PL P + QGD +W NIV W+ AM+ AEE G+T KN+++ Sbjct: 224 ISKLQNPDDYVVLPEIISKEPLGPFVRQGDDKWLNIVRWSLSAMIEAEEYGVTSKNVDEQ 283 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 ++ NP+++R LG+ G LGL + W Y I++ +GNYGE FDRN+G S LKI R Sbjct: 284 L-NSANPNIKRILGVTPGG--GANLGLDEKWAYNIVKQVGNYGESFDRNVGEGSPLKIKR 340 Query: 325 GYNALWSKGGLMYAPPIR 342 G NA W++GGLMYA PIR Sbjct: 341 GLNAQWTQGGLMYALPIR 358 >gi|147674492|ref|YP_001216921.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O395] gi|262169332|ref|ZP_06037024.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae RC27] gi|146316375|gb|ABQ20914.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O395] gi|227013279|gb|ACP09489.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O395] gi|262022145|gb|EEY40854.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae RC27] Length = 342 Score = 332 bits (851), Expect = 5e-89, Method: Composition-based stats. Identities = 162/318 (50%), Positives = 226/318 (71%), Gaps = 3/318 (0%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L + +GF+ CG++TGL GF+ A G+W+G DV++C+A+++A+ D +K++++PL Sbjct: 28 STLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEYCQAMAAAVLGDKTKVKFVPLT 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ K G+ S +L+ Sbjct: 88 AKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKDLGVKSAKELN 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A RCD T D S LYAL Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +L ++P V+LP+IISK PL P + Q D +W+N+ W YAMV AEE GIT KN++++ Sbjct: 208 RLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAMVNAEEYGITSKNVDEM 267 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 K + NP+V+R LG+D G LG+ D +Y+I++ +GNYGE FDR +G+ S LKI R Sbjct: 268 MK-SDNPEVKRILGLDGPKGTG--LGIRDDCSYQIVKQVGNYGESFDRTVGSGSPLKIDR 324 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+ GG MYAPPIR Sbjct: 325 GVNALWNAGGFMYAPPIR 342 >gi|260577146|ref|ZP_05845123.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodobacter sp. SW2] gi|259020620|gb|EEW23939.1| cationic amino acid ABC transporter, periplasmic binding protein [Rhodobacter sp. SW2] Length = 339 Score = 332 bits (850), Expect = 6e-89, Method: Composition-based stats. Identities = 157/342 (45%), Positives = 217/342 (63%), Gaps = 3/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + L + A L D+K RG L CG N GL GFA ANG+++GFD Sbjct: 1 MKKSVFLGTLAVSGLL--AGMAAAGTLDDVKARGILNCGSNNGLTGFAAPDANGNYQGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 C+A+++A+ D SK++++PL + RF AL S ++D+L RN+ WT R+ L F Sbjct: 59 AALCKAIAAAVLGDASKVKFVPLTGETRFTALASGEVDVLIRNSTWTFSRDTDLKFDFVA 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ G+SS +L GA++C+Q GTTTEL LAD+FK++NM Y P+ Sbjct: 119 VNYYDGQGFMVKKELGVSSAKELDGATVCIQTGTTTELNLADFFKSNNMSYTPVTIADDS 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CDAYT D S L A++ T H+ILP+IISK PL P + GD W +I Sbjct: 179 EGQRQYVAGACDAYTTDASGLAAVRATLPDAENHIILPEIISKEPLGPVVRHGDNNWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT+YA+V+AEE GIT N+ + + TTNP+++R LG N+G +GL K+W R I Sbjct: 239 VRWTYYALVSAEENGITAANVEETASTTTNPEIKRLLGASDD-NLGAMMGLDKEWAKRAI 297 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F NLG + + + RG NALW++GGL YAPP R Sbjct: 298 AAQGNYGEIFAANLGESTSIGLARGLNALWTQGGLQYAPPFR 339 >gi|218691562|ref|YP_002399774.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia coli ED1a] gi|218429126|emb|CAR10069.2| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli ED1a] Length = 305 Score = 331 bits (849), Expect = 8e-89, Method: Composition-based stats. Identities = 148/305 (48%), Positives = 214/305 (70%), Gaps = 2/305 (0%) Query: 38 CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++ Sbjct: 3 CGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT TE Sbjct: 63 DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 L +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E ++L Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPTEWIVL 182 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ L Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242 Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337 G + + G+ L L W + II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y Sbjct: 243 GKE--GDYGKDLKLDNKWAFNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300 Query: 338 APPIR 342 APP+R Sbjct: 301 APPVR 305 >gi|39937855|ref|NP_950131.1| ABC transporter amino acid binding protein [Rhodopseudomonas palustris CGA009] gi|39651715|emb|CAE30237.1| ABC transporter, amino acid binding protein [Rhodopseudomonas palustris CGA009] Length = 344 Score = 331 bits (849), Expect = 8e-89, Method: Composition-based stats. Identities = 169/350 (48%), Positives = 236/350 (67%), Gaps = 14/350 (4%) Query: 1 MYKDFFVSILCLIILFFTSFST--------NASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M+K F + L + ++ + + L +R + CG+N GL GF+ Sbjct: 1 MFKRTFRTGLAIGLVVAAGIAAAAITYERYDTKTLKRTIRRDAVLCGVNKGLPGFSTPDD 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+W GFDVDFCRA+++AIFDDP+K+Q++PL+A ERF LQS+++DILSRN+ W++ RE Sbjct: 61 KGNWTGFDVDFCRAVAAAIFDDPTKVQFVPLDANERFKELQSRKVDILSRNSTWSMSRET 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + L F + Y+DGQGF++ + I S +L G+ +CVQ GTTT+L LADYF+A+NMKY Sbjct: 121 NYDLYFPAVAYYDGQGFMVPASRKIDSAVELDGSKVCVQNGTTTQLNLADYFRANNMKYQ 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E+ +++ AY+ +CD +T D+S LYAL+ T ++ +H+ILPD+ISK PLAP + Q Sbjct: 181 EVKSEKFDDVVKAYKDGQCDTFTADVSQLYALRKTFEKSGDHIILPDVISKEPLAPVVRQ 240 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292 D +W IV WT YAM+ AEELGIT +NI + K + PDV R +G + GE LGL+ Sbjct: 241 RDDDWMMIVKWTLYAMINAEELGITSQNIGEALK-SKKPDVMRLVGTE--GAFGEDLGLS 297 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 KDW RIIRH+GNYGE++DRN+G L IPRG N LWS GG+ YAPPIR Sbjct: 298 KDWAARIIRHVGNYGEVYDRNVGK---LGIPRGLNQLWSNGGIQYAPPIR 344 >gi|86135803|ref|ZP_01054382.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseobacter sp. MED193] gi|85826677|gb|EAQ46873.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseobacter sp. MED193] Length = 346 Score = 331 bits (849), Expect = 9e-89, Method: Composition-based stats. Identities = 152/342 (44%), Positives = 218/342 (63%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L I ++ + A L D+K RG L CG+ TGLVGFA A+G+W+GFD Sbjct: 9 MKNTVILG--ALTIAGLSAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNASGEWEGFD 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 67 VAVCRAVAAAVLGDSNAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFTG 126 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ G+SS +L GA++C+Q GTTTEL LAD+F+++N+ Y P+ E Sbjct: 127 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 186 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T + P H +LP+IISK PL P + GD EW ++ Sbjct: 187 EAQQQYLAGACDVYTTDASGLAATRATFEAPDAHTLLPEIISKEPLGPLVRHGDHEWGDV 246 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A+++AEELG+T NI +++ T NP++ R LG + +GE LGL+ DW I Sbjct: 247 VRWTLNALISAEELGVTSANIGEMAAGTNNPEINRLLGTE--GTLGEMLGLSADWGKNAI 304 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F N+G + + + RG NA W+KGGL+Y+PP R Sbjct: 305 AAGGNYGEVFADNIGEATPIGLARGLNAQWTKGGLLYSPPFR 346 >gi|310816976|ref|YP_003964940.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Ketogulonicigenium vulgare Y25] gi|308755711|gb|ADO43640.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Ketogulonicigenium vulgare Y25] Length = 338 Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 155/342 (45%), Positives = 212/342 (61%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + A+ L D+K R L CG NTGL GFA A+G W+GFD Sbjct: 1 MKKSLV--FCAMGALAMGTGLAQAATLDDVKARDVLNCGTNTGLAGFAAPNADGVWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ DP+K+ ++P RF AL S +ID+LSR T WT R++ L F Sbjct: 59 VAVCRAVAAAVLGDPTKVNFVPTTGATRFTALASGEIDMLSRVTTWTFQRDVELAFDFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGFI+ G++S +L GA++C+Q GTTTEL LAD+F+A+ + Y P+ E Sbjct: 119 VNYYDGQGFIVPTSLGVTSAHELDGATVCIQTGTTTELNLADFFRANGISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CDAYT D S L A + T + P +H+ILP+IISK PL P + GD +W +I Sbjct: 179 EGQQQYLAGACDAYTTDASGLAATRATFEAPGDHIILPEIISKEPLGPVVRHGDNQWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ +A+V AEE GIT NI ++S T NP++ R LG + N+GE LGL +W R I Sbjct: 239 VRWSFFALVAAEEYGITSANIEELSAGTDNPEINRILGTE--GNLGEQLGLDAEWAKRAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F + LG + + + RG NALW++GGL YA P R Sbjct: 297 AAEGNYGEIFAKYLGTDTPIGLDRGLNALWTQGGLQYAMPFR 338 >gi|296533466|ref|ZP_06896047.1| cationic amino acid ABC superfamily ATP binding cassette transporter, periplasmic binding protein [Roseomonas cervicalis ATCC 49957] gi|296266210|gb|EFH12254.1| cationic amino acid ABC superfamily ATP binding cassette transporter, periplasmic binding protein [Roseomonas cervicalis ATCC 49957] Length = 350 Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 162/319 (50%), Positives = 221/319 (69%), Gaps = 5/319 (1%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 ++ L IK RG L CG+NTGL GFA+ + G W GFDV++CRAL+ A+F+D SK++Y+P Sbjct: 37 SATLDAIKARGTLSCGVNTGLAGFAQPDSQGRWTGFDVEYCRALAVALFNDASKVRYVPT 96 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 A+ RF ALQS +ID+L RNT TL R+ SLGL F I ++DGQGF++ G+ S +L Sbjct: 97 TAQNRFTALQSGEIDVLPRNTTATLSRDTSLGLDFPAINFYDGQGFMVKASLGVKSAKEL 156 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA++CVQ GTTTE L D+F+A+N+++ P++ ER+EE+ +AY A RCDAYT D+S L A Sbjct: 157 DGATVCVQPGTTTEQNLTDWFRANNIRFTPVIIERLEELVSAYVAGRCDAYTTDVSGLAA 216 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + P EHVILP++ISK PL PA+ GD W ++V WTHYA++ AEE GIT N+++ Sbjct: 217 TRSAQPNPGEHVILPEVISKEPLGPAVRHGDQRWADLVRWTHYALLAAEEFGITAANVDK 276 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + P+VQR LG K+ +G+ LG+ W RII+ GNYGEMF R+L + L I Sbjct: 277 AVAEDQRPEVQRLLG--KTGGLGQMLGVDNAWAARIIKATGNYGEMFTRHL---TPLGIQ 331 Query: 324 RGYNALWSKGGLMYAPPIR 342 RG NA W++GGL YA P R Sbjct: 332 RGPNAQWTQGGLQYAQPFR 350 >gi|218560337|ref|YP_002393250.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|218367106|emb|CAR04880.1| amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] Length = 305 Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 148/305 (48%), Positives = 214/305 (70%), Gaps = 2/305 (0%) Query: 38 CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 CGI+ GL GF+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++ Sbjct: 3 CGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT TE Sbjct: 63 DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 L +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E ++L Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL 182 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ L Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242 Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337 G + + G+ L L W + II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y Sbjct: 243 GKE--GDYGKDLKLDNKWAFNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300 Query: 338 APPIR 342 APP+R Sbjct: 301 APPVR 305 >gi|150397777|ref|YP_001328244.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150029292|gb|ABR61409.1| extracellular solute-binding protein family 3 [Sinorhizobium medicae WSM419] Length = 336 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 155/324 (47%), Positives = 228/324 (70%), Gaps = 3/324 (0%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 +T A+ L +K+RG L+CG++ G++GF+ G+W GFD+DFCRA+++A D ++ Sbjct: 16 GTATQAATLDVVKQRGELRCGVSQGVLGFSAPDDKGEWSGFDIDFCRAVAAAALGDADQV 75 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y+PL+ KERF ALQS ++D+LSR T WTL R+ LG++F +TY+DGQ F++ G+ Sbjct: 76 KYVPLSTKERFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVGVTYYDGQAFMVRDDIGVK 135 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 SV +LSGAS+C + GTTTE +ADYF A+ ++Y I FE+ ++ A+ A RCD Y+ D Sbjct: 136 SVKELSGASVCTETGTTTEQNMADYFSANKIEYKVIAFEKADQTIQAFNAGRCDVYSTDA 195 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 SALY+ ++T + P V+LP++ISK PL PA+ QGD +W+ +V WT +AMV AEELGIT Sbjct: 196 SALYSQRMTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKVVRWTLFAMVEAEELGITL 255 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 ++ + + + +RFLG+D + G ALGL DW Y+++ +GNYGE+F+R+LG S Sbjct: 256 ESAASLLE-SGTVAQKRFLGVDNEA--GRALGLNPDWAYQVVSAVGNYGEIFERHLGQAS 312 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 LKI RG N LW+ GGL+YAPP+R Sbjct: 313 ALKIDRGLNKLWNAGGLIYAPPVR 336 >gi|82778575|ref|YP_404924.1| putative periplasmic binding transport protein [Shigella dysenteriae Sd197] gi|81242723|gb|ABB63433.1| putative periplasmic binding transport protein [Shigella dysenteriae Sd197] Length = 305 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 148/305 (48%), Positives = 213/305 (69%), Gaps = 2/305 (0%) Query: 38 CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 CGI+ GL F+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++ Sbjct: 3 CGISDGLPRFSYADADGKFSGIDVDVCRGVAAAVFGDNTKVKYTPLTAKERFTALQSGEV 62 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT TE Sbjct: 63 DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 L +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E ++L Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL 182 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ L Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242 Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337 G + + G+ L L W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y Sbjct: 243 GKE--GDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300 Query: 338 APPIR 342 APP+R Sbjct: 301 APPVR 305 >gi|311109014|ref|YP_003981867.1| general L-amino acid-binding periplasmic protein AapJ 3 [Achromobacter xylosoxidans A8] gi|310763703|gb|ADP19152.1| general L-amino acid-binding periplasmic protein AapJ 3 [Achromobacter xylosoxidans A8] Length = 338 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 149/340 (43%), Positives = 226/340 (66%), Gaps = 3/340 (0%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++ +L + + + +K +GF++CG++TG+ GF+ + G W G DVD Sbjct: 2 KALKLAAAGTALLISSLTAHAGATFEAVKSKGFVQCGVSTGVAGFSVNDSKGGWIGLDVD 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 CRAL+ +F D SK + + ++A +RF ALQS ++D+L RNT +L R+ +LGL + Sbjct: 62 LCRALAITMFGDASKAKIMAVSALQRFTALQSGEVDVLPRNTTLSLTRDTTLGLIGVAVN 121 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+D QG +++K + S +L GA++CVQ GTTTEL LAD+F++ N+ + P+V ER++EI Sbjct: 122 YYDSQGIMVNKSLNVKSAKELDGATVCVQPGTTTELNLADWFRSQNIVFKPVVVERLDEI 181 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A+ RCDA+TGD S L A + + P ++ ILP+ SK PL P + QGD +W+N+V Sbjct: 182 IRAFAVGRCDAFTGDKSQLAAARSNLENPEKYDILPENFSKEPLGPMVRQGDEQWFNVVR 241 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 WT +AM+ AEE GIT KN++++ K +TNP+VQR LG+ + +G+ LG+ W Y II++ Sbjct: 242 WTLFAMLEAEEYGITSKNVDEMLK-STNPNVQRLLGV--TPGMGKNLGVDDKWAYNIIKN 298 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F++NLG S LK+PRG NA + GGLMY P+R Sbjct: 299 IGNYGESFEKNLGPSSPLKLPRGLNASYRDGGLMYGWPVR 338 >gi|163745575|ref|ZP_02152935.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Oceanibulbus indolifex HEL-45] gi|161382393|gb|EDQ06802.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Oceanibulbus indolifex HEL-45] Length = 338 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 151/342 (44%), Positives = 214/342 (62%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + + + A+ L D+K RG L CG+ TGL GFA ANG+W+GFD Sbjct: 1 MKKTVIFG--ALTVAGLAAGAAGAATLDDVKARGKLNCGVTTGLAGFAAPNANGEWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID L+RNT WT R+ L F Sbjct: 59 VAVCRAVAAAVLGDKNAVEFVPTTGKTRFTALASGEIDFLARNTTWTFSRDTDLKFDFIG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+SS L GA++C+Q GTTTEL LAD+F+ +N+ Y P+ E Sbjct: 119 VNYYDGQGFMVPKALGVSSAKDLDGATVCIQTGTTTELNLADFFRKNNISYEPVPVETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T + P +H++LP+IISK PL P + GD EW +I Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRATFETPGDHILLPEIISKEPLGPLVRHGDNEWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 W A++ AEELGIT NI +++ +T NP++ R LG + +GE +GL +W R I Sbjct: 239 TRWVLNALIAAEELGITSANIEEMTGNTNNPEIARLLGTE--GTLGEMIGLDNEWAKRAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F +N+G ++ + + RG NA W+ GGL+YAPP+R Sbjct: 297 MAEGNYGEIFAKNIGEETPIGLARGLNAQWTDGGLLYAPPVR 338 >gi|330429592|gb|AEC20926.1| putative ABC transporter periplasmic amino acid-binding protein [Pusillimonas sp. T7-7] Length = 338 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 146/340 (42%), Positives = 218/340 (64%), Gaps = 3/340 (0%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + L + F + S +K +GF++CG +T L GF+ + G W G D+D Sbjct: 2 KLIKAAALGASLFFAAATSQAGETYDAVKAKGFVQCGTHTALPGFSIADSKGVWSGIDID 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 C+A+++ +F D +K + P+ ++RF ALQS +ID+L+RNT T+ R+ +LGL + Sbjct: 62 LCKAIATMMFGDATKFKTTPVTTQQRFTALQSGEIDVLTRNTTATMTRDTTLGLMSAGVN 121 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+D QG ++ K+ G+ S +LSGA++CVQ GTTTEL LAD+F+A+N+ + P+V +E Sbjct: 122 YYDSQGIMVSKELGVKSAKELSGAAVCVQPGTTTELNLADWFRANNLDFKPVVINSPDEA 181 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +Y A RCDA+T D S L ++ T P +HVILP+ SK PL P + QGD +W+ +V Sbjct: 182 MRSYVAGRCDAFTTDKSGLATIRTTLANPDDHVILPEDFSKEPLGPMVRQGDDQWFMVVR 241 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 W M+ AEE GIT KN++++ K ++NP++QR LG+ + +G+ LGL W Y +I+ Sbjct: 242 WALNTMLEAEEYGITSKNVDEMLK-SSNPNIQRILGV--TGEMGKGLGLDNKWAYNLIKQ 298 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F+RNLG S +K+ RG NA W GGLMY PIR Sbjct: 299 VGNYGESFERNLGAGSAMKLERGINAQWRDGGLMYGWPIR 338 >gi|86751771|ref|YP_488267.1| extracellular solute-binding protein [Rhodopseudomonas palustris HaA2] gi|86574799|gb|ABD09356.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas palustris HaA2] Length = 341 Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats. Identities = 164/320 (51%), Positives = 226/320 (70%), Gaps = 6/320 (1%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + L +R + CG+N GL GF+ G+W GFDVDFCRA+++AIF+DP+K++++P Sbjct: 28 DTKTLKRTIRRDAVLCGVNKGLPGFSTPDEKGNWTGFDVDFCRAVAAAIFNDPNKVKFVP 87 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L+A ERF LQS+++DILSRN+ W++ RE L F + Y+DG+GF++ + I + + Sbjct: 88 LDANERFKELQSRKVDILSRNSTWSMSREAGYELYFPAVAYYDGEGFMVPSSRKIETALE 147 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G+ +CVQAGTTT L LADYF+A+NMKY + F +++E+ AAY + +CD ++ D S LY Sbjct: 148 LDGSKVCVQAGTTTLLNLADYFRANNMKYQEVKFPKLDEVVAAYNSGQCDTFSADASQLY 207 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 AL+ T +P +HVILPD+ISK PLAP + Q D EW IV W+ YAM+ AEELG+T NI+ Sbjct: 208 ALRQTLAKPGDHVILPDLISKEPLAPVVRQRDDEWMMIVKWSLYAMINAEELGVTSANID 267 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 + K + PDV R +G + GE LGL+KDW RIIRH+GNYGE++DRN+G L I Sbjct: 268 EALK-SKKPDVMRLVGTE--GAYGEELGLSKDWAARIIRHVGNYGEVYDRNVGK---LGI 321 Query: 323 PRGYNALWSKGGLMYAPPIR 342 PRG N LWS GG+ YAPPIR Sbjct: 322 PRGLNQLWSAGGIQYAPPIR 341 >gi|209883786|ref|YP_002287643.1| general L-amino acid-binding periplasmic protein AapJ [Oligotropha carboxidovorans OM5] gi|209871982|gb|ACI91778.1| general L-amino acid-binding periplasmic protein AapJ [Oligotropha carboxidovorans OM5] Length = 349 Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats. Identities = 158/320 (49%), Positives = 224/320 (70%), Gaps = 3/320 (0%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + L +RG ++CG+N GL GF+ A+G+W GFDVD CRA+++AIFDDP+K+ ++P Sbjct: 33 DTQTLKRTLRRGAVQCGVNAGLPGFSNKDASGNWSGFDVDICRAVAAAIFDDPTKVNFVP 92 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L+ +RF LQ++ +DILSRN+ W++ RE+ L F ++Y+DG+GF++ + + + S + Sbjct: 93 LDTNQRFKELQNRTVDILSRNSTWSMSREVDYELTFAAVSYYDGEGFMLRRSRNVDSALE 152 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ICVQ+ TTT+L LADYF+A+NM Y + F V ++ AY + +CD T D S LY Sbjct: 153 LGGTRICVQSDTTTQLNLADYFRANNMTYDEMKFGNVGDLLKAYESGQCDVLTTDTSQLY 212 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 A +LT +P +HVIL DIISK PLAP + Q D +W IV W YAM+ AEELG++ KNI+ Sbjct: 213 AYRLTLAKPDDHVILADIISKEPLAPVVRQRDDQWMLIVKWAVYAMLNAEELGVSSKNID 272 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 + K + PDV R +G + + GEALGLT DW R+IRH+GNY E+++RN+G S+L I Sbjct: 273 EALK-SKKPDVMRLVGTE--GSYGEALGLTNDWAARVIRHVGNYSEVYERNVGVSSKLGI 329 Query: 323 PRGYNALWSKGGLMYAPPIR 342 PRG N LW+ GG+ YAPPIR Sbjct: 330 PRGLNQLWNAGGIQYAPPIR 349 >gi|148252293|ref|YP_001236878.1| general L-amino acid-binding periplasmic protein [Bradyrhizobium sp. BTAi1] gi|146404466|gb|ABQ32972.1| amino acid ABC transporter substrate-binding protein, PAAT family [Bradyrhizobium sp. BTAi1] Length = 345 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 163/317 (51%), Positives = 228/317 (71%), Gaps = 3/317 (0%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +RG + CG+N GL GF+ G+W GFDVDFCRA+++AIFDDP K +++PL+A Sbjct: 32 TLKRTVRRGEVLCGVNAGLPGFSIPDDKGNWTGFDVDFCRAVAAAIFDDPKKAKFVPLDA 91 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ERF LQS+++DILSRNT W++ RE + L F + Y+DGQGF++ + + + + L+G Sbjct: 92 NERFKELQSRKVDILSRNTTWSMAREQNYDLYFPAVAYYDGQGFMVPRSRKLETALDLNG 151 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + +CVQ TT L LADYF+A+NMKY I F +++++ AY + +CD +T D+S LYAL+ Sbjct: 152 SKVCVQDSTTNALNLADYFRANNMKYEEIKFLKLDDVLKAYDSGKCDTFTADVSQLYALR 211 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 L +P++H ILPD+ISK PLAP + Q D +W IV WT YAM+ AEELG+T KNI++ Sbjct: 212 LVLTKPNDHDILPDMISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGVTSKNIDEAL 271 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 K + PDV R +G + G+ LGL KDW RIIRH+GNYGE+++RN+G++S+LKIPRG Sbjct: 272 K-SKKPDVMRLVGNE--GTYGQDLGLAKDWAARIIRHVGNYGEVYERNIGSESKLKIPRG 328 Query: 326 YNALWSKGGLMYAPPIR 342 N LW+ GG+ YAPPIR Sbjct: 329 MNQLWNAGGIQYAPPIR 345 >gi|192293640|ref|YP_001994245.1| extracellular solute-binding protein family 3 [Rhodopseudomonas palustris TIE-1] gi|192287389|gb|ACF03770.1| extracellular solute-binding protein family 3 [Rhodopseudomonas palustris TIE-1] Length = 344 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 167/350 (47%), Positives = 235/350 (67%), Gaps = 14/350 (4%) Query: 1 MYKDFFVSILCLIILFFTSFST--------NASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M+K F + L + ++ + + L +R + CG+N GL GF+ Sbjct: 1 MFKRTFRTGLAIGLVVAAGIAAAAITYERYDTKTLKRTIRRDAVLCGVNKGLPGFSTPDD 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+W GFDVDFCRA+++AIFDDP+K+Q++PL+A ERF LQS+++DILSRN+ W++ RE Sbjct: 61 KGNWTGFDVDFCRAVAAAIFDDPTKVQFVPLDANERFKELQSRKVDILSRNSTWSMSRET 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + L F + Y+DGQGF++ + I S +L G+ +CVQ GTTT+L LADYF+ +NMKY Sbjct: 121 NYDLYFPAVAYYDGQGFMVPASRKIDSAVELDGSKVCVQNGTTTQLNLADYFRTNNMKYQ 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E+ +++ AY+ +CD +T D+S LYAL+ T ++ +H+ILPD+ISK PLAP + Q Sbjct: 181 EVKSEKFDDVVKAYKDGQCDTFTADVSQLYALRKTFEKSGDHIILPDVISKEPLAPVVRQ 240 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292 D +W IV WT YAM+ AEELGIT +NI + K + PDV R +G + GE LGL+ Sbjct: 241 RDDDWMMIVKWTLYAMINAEELGITSQNIGEALK-SKKPDVMRLVGTE--GAFGEDLGLS 297 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 KDW R+IRH+GNYGE++DRN+G L IPRG N LWS GG+ YAPPIR Sbjct: 298 KDWAARVIRHVGNYGEVYDRNVGK---LGIPRGLNQLWSNGGIQYAPPIR 344 >gi|146343600|ref|YP_001208648.1| general L-amino acid-binding periplasmic protein [Bradyrhizobium sp. ORS278] gi|146196406|emb|CAL80433.1| General L-amino acid-binding periplasmic protein [Bradyrhizobium sp. ORS278] Length = 345 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 160/317 (50%), Positives = 226/317 (71%), Gaps = 3/317 (0%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +RG + CG+N GL GF+ G+W GFDVDFCRA+++AIFDDP K +++PL+A Sbjct: 32 TLKRTVRRGEVLCGVNAGLPGFSIPDDKGNWTGFDVDFCRAVAAAIFDDPKKARFVPLDA 91 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ERF LQS+++DILSRNT W++ RE + L F + Y+DGQGF++ + + + + L+G Sbjct: 92 SERFKELQSRKVDILSRNTTWSMAREQNYDLYFPAVAYYDGQGFMVPRARKLETALDLNG 151 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + +CVQ TT L L DYF+A+NMKY + +++++ AY + +CD +T D+S LYAL+ Sbjct: 152 SKVCVQDSTTNALNLGDYFRANNMKYEEVKLPKLDDVLKAYDSGKCDTFTADVSQLYALR 211 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 L +P +H ILPD+ISK PLAP + Q D +W IV WT YAM+ AEELG+T KNI++ Sbjct: 212 LVLTKPGDHDILPDLISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGVTSKNIDEAL 271 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 K + PDV R +G + G+ LGL+KDW RIIRH+GNYGE+++RN+G++S+LKIPRG Sbjct: 272 K-SKKPDVMRLVGNE--GTYGQDLGLSKDWAARIIRHVGNYGEVYERNVGSESKLKIPRG 328 Query: 326 YNALWSKGGLMYAPPIR 342 N LW+ GG+ YAPPIR Sbjct: 329 MNQLWNAGGIQYAPPIR 345 >gi|293605353|ref|ZP_06687737.1| general amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292816245|gb|EFF75342.1| general amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 338 Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats. Identities = 150/343 (43%), Positives = 219/343 (63%), Gaps = 6/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + + +L S + +KK+GFL+CG G+ GF+ + + G+W G D Sbjct: 1 MRK-FLTTAVAATLLCVASGAQAGVTFDAVKKKGFLQCG-FAGIPGFSVLDSKGEWTGLD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A+F D SK++ L A+ +F ALQS +ID+LSRNT TL R+ +LGL Sbjct: 59 VDMCRAVAAAMFGDASKVKGNVLTAQAKFTALQSGEIDMLSRNTTQTLTRDTTLGLIGVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++D QG I+ K + SV +L GA+ICVQ GTTTEL LADYF++ + + P++ E + Sbjct: 119 VNFYDAQGLIVKKSMNVKSVKELDGATICVQPGTTTELNLADYFRSRGLTFKPVLVENYD 178 Query: 181 EIDAAYRAHRCDAYTGDISALYA-LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E + RCDAYT D S A ++ +P + IL + +SK PL P + QGD +W+N Sbjct: 179 ENFRLLESGRCDAYTNDKSNTAANMRTRLAKPEDWEILSENLSKEPLGPMVRQGDEQWFN 238 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 +V W+ AM+ AEE GIT KN++++ K +TNP+VQR LG+ + +G+ LGL W Y I Sbjct: 239 VVRWSLNAMLEAEEYGITSKNVDEMLK-STNPNVQRILGV--TPGMGKNLGLDDKWAYNI 295 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNYGE +DR +G S LK+ RG N W++GGLMY P+R Sbjct: 296 IKQVGNYGESYDRAMGKDSPLKLERGLNKQWTQGGLMYGWPVR 338 >gi|330814052|ref|YP_004358291.1| glutamate Aspartate periplasmic binding protein precursor GltI [Candidatus Pelagibacter sp. IMCC9063] gi|327487147|gb|AEA81552.1| glutamate Aspartate periplasmic binding protein precursor GltI [Candidatus Pelagibacter sp. IMCC9063] Length = 343 Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats. Identities = 150/346 (43%), Positives = 221/346 (63%), Gaps = 7/346 (2%) Query: 1 MYK-DFFVSILCLIILFFTS--FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M F VSI +++L + S L K +GF+KCG++ GL GF+ A+G+W Sbjct: 1 MKIIKFAVSIFAVLLLAACGNESAKKTSTLDTTKSQGFVKCGVSQGLPGFSNADASGNWA 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DVD CRA+++A+ D +K++Y PL+AKERF ALQ+ ID+LSRNT WTL R+ ++GL Sbjct: 61 GMDVDVCRAVAAAVLGDATKVKYTPLSAKERFTALQAGDIDVLSRNTTWTLERDAAIGLE 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + ++DGQGF++ KK GI SV G +C GTTTEL +AD+FKA + Y P+VF Sbjct: 121 FVGVNFYDGQGFMVRKKSGIKSVKDFQNGTKVCTNTGTTTELNMADFFKAAGVSYEPVVF 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E+ +E+ AY + RCD YT D S L + + P +H++LP+ ISK PL P + +GD Sbjct: 181 EKADEVVQAYDSGRCDTYTTDKSGLASQRTKLTAPDDHIVLPETISKEPLGPVVREGDAT 240 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296 W ++V W+ + AEE G+ +NI+ + D+ NP +QR +G + + N G AL L + W+ Sbjct: 241 WADVVRWSLNVWIEAEEYGVNSENIDSMM-DSKNPAIQRIVGAEGTKN-GAALNLDQKWS 298 Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 Y +I+ +GNY E + RNL + + RG NALW+ GG++Y PP+R Sbjct: 299 YNLIKQVGNYAESYKRNL-ADTGIMPDRGPNALWTNGGILYVPPVR 343 >gi|159042874|ref|YP_001531668.1| glutamate/glutamine/aspartate/asparagine ABC transporter [Dinoroseobacter shibae DFL 12] gi|157910634|gb|ABV92067.1| glutamate/glutamine/aspartate/asparagine ABC transporter [Dinoroseobacter shibae DFL 12] Length = 338 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 153/342 (44%), Positives = 221/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + A L +++ RG + CGI+TGLVGFA ANG+W+GFD Sbjct: 1 MKKSVL--FGALAAAGLAATGAAADTLEEVQARGAVNCGISTGLVGFASQDANGEWQGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+F DP+ + + P+ + RF L S +ID+L+RNT WT R++ L L F Sbjct: 59 VAVCRAVAAAVFGDPTAVNFNPVTNQVRFEVLNSGEIDMLARNTTWTFSRDVDLKLEFTG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y+DGQGF++ K G+SS ++L GA++C+Q GTTTEL LAD+F+A+N+ + P+ Sbjct: 119 INYYDGQGFMVPKALGVSSATELDGATVCIQKGTTTELNLADFFRANNISFEPVPISTAS 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + + + P EHV+LP+IISK PL P + GD EW +I Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRASFESPDEHVVLPEIISKEPLGPLVRHGDNEWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT A++ AEELG+T N+ +++ T NP++ R LG + N+GE LGL+ DW +I Sbjct: 239 VRWTLNALIAAEELGVTSANVAELAAGTDNPEINRLLGTE--GNLGEQLGLSADWAVNVI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + GNYGE+F+ ++G + + + RG NA W++GGL+YAPP R Sbjct: 297 KAGGNYGEIFETHIGENTPIGLARGLNAQWTEGGLLYAPPFR 338 >gi|154245585|ref|YP_001416543.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154159670|gb|ABS66886.1| extracellular solute-binding protein family 3 [Xanthobacter autotrophicus Py2] Length = 337 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 148/315 (46%), Positives = 209/315 (66%), Gaps = 3/315 (0%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +K RG L CG++ GL GF+ A+G W GFDVD CR L++AIF+DP+K++++PL+A E Sbjct: 26 KTVKDRGELVCGVSKGLPGFSAPDASGKWTGFDVDVCRGLAAAIFNDPNKVKFVPLSADE 85 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 RF AL +D+LSRN+ WTL RE LGL F I Y+DGQGF++ + ++S +L + Sbjct: 86 RFPALTKGDVDMLSRNSTWTLEREAKLGLLFTAINYYDGQGFLVRDARKVTSALELDKSK 145 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +CVQAGTT E DYF A+ M + ++ AY +CD T D+S LYAL+LT Sbjct: 146 VCVQAGTTAEDNTKDYFAANGMTLELVTLPTSTDLVKAYEEGKCDTLTTDVSQLYALRLT 205 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 +P +H++LPD+ISK PL P + QGD +W+N+V WT + M+ AEELG++ I+ Sbjct: 206 MAKPGDHIVLPDVISKEPLGPVVRQGDDQWFNLVKWTIFGMINAEELGVSTTTIDAALA- 264 Query: 268 TTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYN 327 + P+V R +G D GE LG++ D+ RI++ +GNYGE F+RN+G S+L IPRG N Sbjct: 265 SKKPEVIRLVGND--GKFGEQLGVSNDFVVRIVKAVGNYGESFERNVGAASKLGIPRGIN 322 Query: 328 ALWSKGGLMYAPPIR 342 LWS GG+ YAPP+R Sbjct: 323 QLWSMGGIQYAPPVR 337 >gi|91978841|ref|YP_571500.1| extracellular solute-binding protein [Rhodopseudomonas palustris BisB5] gi|91685297|gb|ABE41599.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas palustris BisB5] Length = 341 Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats. Identities = 162/320 (50%), Positives = 223/320 (69%), Gaps = 6/320 (1%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + L +R + CG+N GL GF+ G+W GFDVDFCRA+++AIF+DP+K++++P Sbjct: 28 DTKTLKRTIRRDAVLCGVNKGLPGFSTPDDKGNWSGFDVDFCRAVAAAIFNDPNKVKFVP 87 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L+A ERF LQS+++DILSRN+ W++ RE L F + Y+DGQGF+ + + + + Sbjct: 88 LDANERFKELQSRKVDILSRNSTWSMSRETGYELYFPAVAYYDGQGFMAPAARKVETALE 147 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G+ +CVQ GTTT L LAD+F+ +NMKY + F +++E+ +AY+ +CD +T D S LY Sbjct: 148 LDGSKVCVQEGTTTLLNLADFFRTNNMKYQEVKFGKLDEVVSAYKNGQCDTFTADASQLY 207 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 AL+ T D+P +HVILPD+ISK PLAP + Q D +W IV WT YAM+ AEELGIT NI+ Sbjct: 208 ALRQTLDKPGDHVILPDLISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGITSINID 267 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 + K + PDV R +G + GE LGL KDW RIIRH+GNYGE++DRN+G L I Sbjct: 268 EALK-SKKPDVMRLVGTE--GTYGEELGLPKDWAARIIRHVGNYGEIYDRNVGK---LGI 321 Query: 323 PRGYNALWSKGGLMYAPPIR 342 PRG N LW+ GG+ YAPPIR Sbjct: 322 PRGLNQLWNAGGIQYAPPIR 341 >gi|27376134|ref|NP_767663.1| amino acid binding protein [Bradyrhizobium japonicum USDA 110] gi|27349273|dbj|BAC46288.1| bll1023 [Bradyrhizobium japonicum USDA 110] Length = 345 Score = 328 bits (841), Expect = 7e-88, Method: Composition-based stats. Identities = 156/317 (49%), Positives = 228/317 (71%), Gaps = 3/317 (0%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +RG + CG+N GL GF+ G+W GFDVDFCRA+++AIF+DP+K +++ L+A Sbjct: 32 TLKRTVRRGEVLCGVNKGLPGFSIPDDKGNWTGFDVDFCRAVAAAIFNDPAKAKFVALDA 91 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ERF LQS+++DILSRN+ W++ RE+ L F + Y+DG GF++ + + + L+G Sbjct: 92 SERFKELQSRKVDILSRNSTWSMARELDYDLYFPAVAYYDGAGFMLPRSRNKETSLDLTG 151 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + +CVQ GTTT L ++DYF+A+NMKY + F++++++ AY +CD + D+S LYAL+ Sbjct: 152 SKVCVQTGTTTALNVSDYFRANNMKYEEVKFDKLDDVVKAYDTGKCDTLSADVSQLYALR 211 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 L +P +H+ILPD+ISK PLAP + Q D +W IV WT YAM+ AEELG++ +NI++ Sbjct: 212 LNLSKPGDHMILPDMISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGVSSENIDEAL 271 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 K + P+V R +G + N GE LGLTKDW RIIR++GNYGEM++RN+G +S+LKIPRG Sbjct: 272 K-SKKPEVMRLVGTE--GNYGEQLGLTKDWVVRIIRNVGNYGEMYERNIGEKSKLKIPRG 328 Query: 326 YNALWSKGGLMYAPPIR 342 N LW+ GG+ YAPP+R Sbjct: 329 MNQLWNAGGVQYAPPMR 345 >gi|320184061|gb|EFW58881.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Shigella flexneri CDC 796-83] Length = 349 Score = 328 bits (841), Expect = 7e-88, Method: Composition-based stats. Identities = 157/351 (44%), Positives = 234/351 (66%), Gaps = 11/351 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A L ++K+GF++CGI+ GL+GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLLGFSYADADGKFSGI 60 Query: 60 DVDF--------CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 DVD CR++++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ Sbjct: 61 DVDVDVDVDVDVCRSVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRD 120 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY Sbjct: 121 AGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKY 180 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 P+ F+R +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + Sbjct: 181 TPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVR 240 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291 +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ LG + + G+ L L Sbjct: 241 RGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKL 298 Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 DNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 349 >gi|326794954|ref|YP_004312774.1| ABC-type transporter periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] gi|326545718|gb|ADZ90938.1| ABC-type transporter, periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] Length = 343 Score = 328 bits (841), Expect = 8e-88, Method: Composition-based stats. Identities = 136/345 (39%), Positives = 213/345 (61%), Gaps = 5/345 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + IL + S++ AS L ++K RG++ C I GF + G+W+G Sbjct: 1 MKKATSLLILASSMFSAASYAAETASTLDEVKSRGYMNCVIGNSFPGFYSLNKEGEWQGM 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D CR++S+A+F D SK+++LP+ + F +++S + D+LS+ WTL R+ GL F Sbjct: 61 DIDMCRSVSAAVFGDSSKVKFLPVQWAQSFTSIKSGKGDMLSKGMTWTLSRDTQQGLDFL 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++DGQGF++ K G+ SV L GA++CV GT++EL +AD+ +A+N+ +VF+ Sbjct: 121 DTYFYDGQGFMVRKDLGVDSVYDLEGATVCVLTGTSSELNIADFSRANNLDLKTVVFDDS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A+ CDA T D S L A + P ++++LP+ ISK L+ A+ Q D+EW N Sbjct: 181 SVRNTAFFNDNCDALTNDKSGLAAQRSAAQNPDDYIVLPETISKEALSFAVKQNDSEWAN 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 +V WT AMV AEE GIT N++Q+ ++ +P V+R LG++ N+ LGL +DW Y++ Sbjct: 241 VVKWTFAAMVAAEEYGITSDNVDQMRSESNSPVVRRLLGVE--GNLNTGLGLPQDWAYQV 298 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPR--GYNALWSKGGLMYAPPIR 342 I+ +GNYGE+++RN+G S L + R NALW GG+MYA R Sbjct: 299 IKSVGNYGEVYERNVGPNSVLGLKREGTLNALWKDGGMMYAKSFR 343 >gi|187479528|ref|YP_787553.1| L-amino acid ABC transporter substrate-binding protein [Bordetella avium 197N] gi|115424115|emb|CAJ50668.1| L-amino acid ABC transporter, substrate-binding protein [Bordetella avium 197N] Length = 338 Score = 328 bits (840), Expect = 1e-87, Method: Composition-based stats. Identities = 148/321 (46%), Positives = 225/321 (70%), Gaps = 3/321 (0%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + ++KK+GF++CG++TG+ GF+ + G+WKG DVD CRA+++A+F D SK + Sbjct: 21 QAGTTFDNVKKKGFVQCGVSTGIPGFSIADSKGEWKGLDVDLCRAVAAAMFGDASKFKVT 80 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 PLN ++RF ALQS ++D+L+RNT TL R+ +LGLA + Y+D QG ++ K G+ S Sbjct: 81 PLNTQQRFTALQSGEVDVLTRNTTLTLSRDTTLGLADVAVNYYDSQGVMVSKDLGVKSAK 140 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +L GA++CVQ GTTTEL LAD+F+++N+++ P+V ++ +EI A+ A RCDA+T D S L Sbjct: 141 ELGGATVCVQPGTTTELNLADWFRSNNIEFKPVVIDKYDEIVRAFSAGRCDAFTTDKSQL 200 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + + T ++P +VILP+ SK PL P + QGD +W+N++ WT AM+ AEE GIT KN+ Sbjct: 201 ASTRTTLEKPDNYVILPEDFSKEPLGPMVRQGDEQWFNMIRWTLTAMIEAEEYGITSKNV 260 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 +++K + NP++QR LG+ + +G+ LG+ W Y I++ +GNYGE F+ NLG S +K Sbjct: 261 EEMTK-SGNPNIQRILGV--TPGMGKNLGVDDKWAYNIVKQVGNYGESFEANLGKNSPMK 317 Query: 322 IPRGYNALWSKGGLMYAPPIR 342 + RG NA + GGLMY PIR Sbjct: 318 LERGMNASYKHGGLMYGWPIR 338 >gi|260426367|ref|ZP_05780346.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Citreicella sp. SE45] gi|260420859|gb|EEX14110.1| glutamate/glutamine/aspartate/asparagine-binding protein bztAprecursor [Citreicella sp. SE45] Length = 339 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 149/343 (43%), Positives = 215/343 (62%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + + A+ L D+K RG L CG++TGL GF+ ANG W+GFD Sbjct: 1 MKKTVILG--ALTVAGLAAGAAGAATLDDVKARGSLNCGVSTGLTGFSAPDANGVWQGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ DP ++++P + RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VAVCRAVAAAVLGDPMAVEFVPTTGQTRFTALASGEIDVLARNTTWTFSRDVDLKFEFIG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+SS +L GA++C+Q GTTTEL LAD+F+ +N+ Y P+ E Sbjct: 119 VNYYDGQGFMVPKALGVSSAKELDGATVCIQTGTTTELNLADFFRVNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + + + P +HVILP+IISK PL P + GD+EW +I Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRASFEAPGDHVILPEIISKEPLGPLVRHGDSEWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDT-TNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V WT A+V AEE G+T NI ++S NP++ R LG + +G GL DW + Sbjct: 239 VRWTLNALVAAEEYGVTSANIGELSAAPGNNPEINRLLGTE--GELGAMFGLEADWAKKA 296 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I GNYGE+F++ +G + + + RG NA W++GGL+Y+PP R Sbjct: 297 IMANGNYGEIFEKTIGENTPIGLSRGLNAQWTEGGLLYSPPFR 339 >gi|159028157|emb|CAO89764.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 351 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 147/326 (45%), Positives = 209/326 (64%), Gaps = 6/326 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T+ S +A L +K RG L CGIN + GF+ V G++ G DV CRA+++A+FDDP+K Sbjct: 31 TANSPSADRLQTVKNRGKLICGINGEVPGFSFVNEKGEYSGLDVQICRAIAAALFDDPAK 90 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++Y L+ +ERF A+Q+ ++DILSRNT WT+ R+ +LG+ F ++DGQG + K I Sbjct: 91 VEYRKLSPQERFTAVQTGEVDILSRNTTWTINRDTALGMEFITPVFYDGQGIMATKASNI 150 Query: 138 SSVSQLSGASICVQAGTTTELTLAD-YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + LSG SICV +GTTTE LAD KA Y PIV + VE + AY+A RC A T Sbjct: 151 KKLEDLSGKSICVLSGTTTEQNLADAMAKAAVQGYKPIVSDDVEALYTAYQAGRCQAVTS 210 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S L A + RP +H +L +ISK PLAPA+ GD W N V ++++ EE GI Sbjct: 211 DRSQLVARRSVFPRPQDHQLLEVVISKEPLAPAVADGDPAWSNAVRSIVFSLIQGEEFGI 270 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 +NI D+ +P ++RFLGID+ +GE +GL D+ R+++ +GNYGE++DR +G Sbjct: 271 NSQNIATF-ADSKDPSIRRFLGIDE--KLGEDMGLPNDFAQRVLKQVGNYGEIYDREIGQ 327 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 L++ RG N LW+KGGL+Y+PP R Sbjct: 328 --PLQLDRGLNNLWTKGGLLYSPPFR 351 >gi|166368449|ref|YP_001660722.1| amino acid transport system substrate-binding protein [Microcystis aeruginosa NIES-843] gi|166090822|dbj|BAG05530.1| amino acid transport system substrate-binding protein [Microcystis aeruginosa NIES-843] Length = 351 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 147/326 (45%), Positives = 209/326 (64%), Gaps = 6/326 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T+ S +A L +K RG L CGIN + GF+ V G++ G DV CRA+++A+FDDPSK Sbjct: 31 TANSPSADRLQTVKNRGKLICGINGEVPGFSFVNEKGEYSGLDVQICRAIAAALFDDPSK 90 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++Y L+ +ERF A+Q+ ++DILSRNT WT+ R+ +LG+ F ++DGQG + K + Sbjct: 91 VEYRKLSPQERFTAVQTGEVDILSRNTTWTINRDTALGMEFITPVFYDGQGIMATKASNV 150 Query: 138 SSVSQLSGASICVQAGTTTELTLAD-YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + LSG SICV +GTTTE LAD KA Y PIV + VE + AY+A RC A T Sbjct: 151 KKLEDLSGKSICVLSGTTTEQNLADAMAKAAVQGYKPIVSDDVEALYTAYQAGRCQAVTS 210 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S L A + RP +H +L +ISK PLAPA+ GD W N V ++++ EE GI Sbjct: 211 DRSQLVARRSVFPRPQDHQLLEVVISKEPLAPAVADGDPAWSNAVRSIVFSLIQGEEFGI 270 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 +NI D+ +P ++RFLGID+ +GE +GL D+ R+++ +GNYGE++DR +G Sbjct: 271 NSQNIATF-ADSKDPSIRRFLGIDE--KLGEDMGLPNDFAQRVLKQVGNYGEIYDREIGK 327 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 L++ RG N LW+KGGL+Y+PP R Sbjct: 328 --PLQLDRGLNNLWTKGGLLYSPPFR 351 >gi|30064596|ref|NP_838767.1| putative periplasmic binding transport protein [Shigella flexneri 2a str. 2457T] gi|56480353|ref|NP_709270.2| putative periplasmic binding transport protein [Shigella flexneri 2a str. 301] gi|30042855|gb|AAP18578.1| putative periplasmic binding transport protein [Shigella flexneri 2a str. 2457T] gi|56383904|gb|AAN44977.2| putative periplasmic binding transport protein [Shigella flexneri 2a str. 301] gi|313648492|gb|EFS12934.1| general L-amino acid-binding periplasmic protein aapJ [Shigella flexneri 2a str. 2457T] Length = 305 Score = 327 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 147/305 (48%), Positives = 212/305 (69%), Gaps = 2/305 (0%) Query: 38 CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 CGI+ GL F+ A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++ Sbjct: 3 CGISDGLPRFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT TE Sbjct: 63 DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 L +ADYFKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E ++L Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL 182 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ L Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242 Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337 G + + G+ L L W Y II+ + NY E+F+RN+G++S LKI RG N LW+ GG+ Y Sbjct: 243 GKE--GDYGKDLKLDNKWAYNIIKQVSNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300 Query: 338 APPIR 342 APP+R Sbjct: 301 APPVR 305 >gi|85703851|ref|ZP_01034954.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. 217] gi|85671171|gb|EAQ26029.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. 217] Length = 339 Score = 327 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 154/343 (44%), Positives = 222/343 (64%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L + + ++ A+ L D+K RG L CG+ TGLVGFA ANG W+GFD Sbjct: 1 MKKTVFLG--ALTVAGLAAGASAAATLDDVKARGKLNCGVTTGLVGFAAPDANGVWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+L+RNT WT R+ L F Sbjct: 59 VAVCRAVAAAVLSDANAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDTDLKFDFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K G+SS +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+ E Sbjct: 119 VNYYDGQGFLVPKSLGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L + + + P++HVILP+IISK PL P + GD +W +I Sbjct: 179 EGQQQYLAGACDTYTTDASGLASTRAAFESPTDHVILPEIISKEPLGPLVRHGDNDWADI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQV-SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V WT YA+V AEE+GIT NI ++ + NP++ R LG + ++G +GL +W R Sbjct: 239 VRWTFYALVAAEEMGITSANIGELSAAAGDNPEINRILGTE--GDLGAMIGLDNEWAKRA 296 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I GNYGE+F++N+G ++ + + RG NA W++GG+MYAPP R Sbjct: 297 IAASGNYGEIFEKNIGEKTPIGLARGLNAQWTQGGIMYAPPFR 339 >gi|227325810|ref|ZP_03829834.1| Extracellular solute-binding protein, family 3 precursor [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 350 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 137/353 (38%), Positives = 208/353 (58%), Gaps = 14/353 (3%) Query: 1 MYKDFFVSILCLIILF----------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV 50 M + ++ + + N L IK RG L CG++ GF+ + Sbjct: 1 MLRKLLSLTTATVLTLGSLLLPVAQATAADAGNGETLKKIKARGELVCGVHPARHGFSAI 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + G W G DVD+CRAL++AIF D +K+++ L+ +RF A+QS ++D+LSRN L R Sbjct: 61 DSKGQWTGLDVDYCRALAAAIFGDANKVRFAALSTAQRFPAIQSGEVDVLSRNITADLSR 120 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + SLGL F P T++ G GF++ + V L GA++C+ G++TE +A F + N+ Sbjct: 121 DTSLGLNFAPPTFYTGTGFMVRTSANVKKVEDLDGATVCITPGSSTERNVAQIFASRNLH 180 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPA 229 Y P+V E +E AAY + RCD D AL ++ ++PS+HVILP I SK PLA A Sbjct: 181 YTPVVIENNKEYVAAYLSGRCDVIARDKVALPGVRTFDAEKPSDHVILPGIYSKEPLAMA 240 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL 289 + QGD +WY+IV W YA AEE+ I Q+N++ K +T+PD+Q LG+ + + G+ L Sbjct: 241 VRQGDDQWYDIVKWVVYATFNAEEMEIGQQNVDSKLK-STDPDIQALLGV--TGDYGQKL 297 Query: 290 GLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GL W Y +I+ +GNYG++++R+ G + + R N LW+KGGL+Y PIR Sbjct: 298 GLNNQWAYNLIKQVGNYGDIYNRHFGPDTPAPLERDLNNLWTKGGLLYGLPIR 350 >gi|293602040|ref|ZP_06684495.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292819570|gb|EFF78596.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 361 Score = 326 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 151/343 (44%), Positives = 227/343 (66%), Gaps = 6/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + LF +S++ A +K +GF++CG++TG+ GF+ + G W G Sbjct: 24 MK--ALKHVAAGTALFLSSWAATAGVTFDSVKNKGFVQCGVSTGVAGFSVNDSKGGWIGL 81 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CRAL+ +F DP+K + + ++A +RF ALQS ++D+L RNT +L R+ +LGL Sbjct: 82 DVDLCRALAITMFGDPAKSKIMAVSAVQRFTALQSGEVDVLPRNTTLSLTRDTTLGLIGV 141 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y+D QG +++K + S +L GA++CVQ GTTTEL LAD+F++ N+ + P+V ER+ Sbjct: 142 GVNYYDSQGIMVNKSLNVKSAKELDGATVCVQPGTTTELNLADWFRSQNIVFKPVVVERL 201 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +EI A+ RCDA+TGD S L A + + P ++ ILP+ SK PL P + QGD +W+N Sbjct: 202 DEIIRAFAVGRCDAFTGDKSQLAAARSNLENPGQYDILPENFSKEPLGPMVRQGDEQWFN 261 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 +V WT +AM+ AEE G+T KN++++ K +TNP+VQR LG+ + +G+ LG+ W Y I Sbjct: 262 VVRWTMFAMLEAEEYGVTSKNVDEMLK-STNPNVQRLLGV--TPGMGKNLGVDDKWAYNI 318 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+H+GNYGE F++NLG S LK+ RG NA + GGLMY P+R Sbjct: 319 IKHIGNYGESFEKNLGPSSPLKLSRGLNASYRDGGLMYGWPVR 361 >gi|330938900|gb|EGH42413.1| extracellular solute-binding protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 324 Score = 326 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 148/324 (45%), Positives = 212/324 (65%), Gaps = 2/324 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + L IKK+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TY+DG GF+++ K G++S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ + Sbjct: 123 VTYYDGIGFLVNNKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + RCD T D S LYA + +P ++++LP++ISK PL P + +GD EW++I Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT +AM+ AEE IT KN+ +K T NPDV R LG D G+ L L KDW +I+ Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGQDLKLPKDWVVQIV 300 Query: 301 RHMGNYGEMFDRNLGNQSELKIPR 324 + +GNYGE+F+RNLG + LKI R Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKR 324 >gi|296448618|ref|ZP_06890487.1| extracellular solute-binding protein family 3 [Methylosinus trichosporium OB3b] gi|296253868|gb|EFH01026.1| extracellular solute-binding protein family 3 [Methylosinus trichosporium OB3b] Length = 351 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 148/338 (43%), Positives = 210/338 (62%), Gaps = 3/338 (0%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F +L L + + A+ LG + +RG L CG+ G GFA G+W G DVDFC Sbjct: 17 MFALLLPLAPARASGLAVRAATLGQVTERGRLLCGVGAGQPGFARQDEKGEWSGLDVDFC 76 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RA+++AIFDDPS+ + L KER ALQ+ ++D+L+ WTL R+ G+AF +F Sbjct: 77 RAVAAAIFDDPSRASIVALTPKERLKALQTGEVDLLAHGAAWTLARDAGQGVAFVATLFF 136 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQGF+ +K+ S L+G SICVQ GT+ EL L D +A + P +F EE Sbjct: 137 DGQGFLTARKRAAQSRRDLAGLSICVQQGTSFELDLVDGRRASDKPVEPRLFPSFEEAAE 196 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 AY +CDA T D+S L A + + P H IL ++I K PL P + QGD +W+++V WT Sbjct: 197 AYAQGQCDALTADLSTLAAERARLEAPDRHAILAELIDKEPLGPIVRQGDAQWFDVVRWT 256 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 ++AM+ AEELG+ N+++ K + +P +R LG++ E GL DW YRI++H+G Sbjct: 257 YFAMLDAEELGVASTNVDEALK-SADPRTRRLLGVE--GGRVEGFGLEPDWAYRIVKHVG 313 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NYGE+F+RNLG+ S L + R NALW++GGLMYAPP+R Sbjct: 314 NYGEVFERNLGHGSPLGLDRRLNALWTEGGLMYAPPVR 351 >gi|99080135|ref|YP_612289.1| lysine-arginine-ornithine-binding periplasmic protein [Ruegeria sp. TM1040] gi|99036415|gb|ABF63027.1| Lysine-arginine-ornithine-binding periplasmic protein [Ruegeria sp. TM1040] Length = 338 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 155/342 (45%), Positives = 217/342 (63%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F L + + + A L D+K R L CG++TGLVGF+ ANG+W+GFD Sbjct: 1 MNNSVFFG--ALTVAGLAAGAAAAGTLDDVKARDKLNCGVSTGLVGFSAPNANGEWEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + CRA+++A+ DPSK++Y+P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 IAVCRAVAAAVLGDPSKVEYVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ G+SS +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+ E Sbjct: 119 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + T D + HVILP+IISK PL P + GD EW ++ Sbjct: 179 EARQQYLAGACDVYTTDASGLAATRATFDDAANHVILPEIISKEPLGPLVRHGDNEWGDV 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT AM+ AEELGIT N+ + + T NP++ R LG + +GE LGL D+ + + Sbjct: 239 VRWTLNAMIAAEELGITSANLAEKAAGTDNPEINRLLGTE--GTLGEMLGLEADFAQKAL 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F + +G + + + RG NA W+ GGL+YAPP R Sbjct: 297 AAGGNYGEIFAKTIGEDTPVGLARGLNAQWTDGGLLYAPPFR 338 >gi|332098837|gb|EGJ03794.1| general L-amino acid-binding periplasmic protein aapJ [Shigella boydii 3594-74] Length = 357 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 157/359 (43%), Positives = 234/359 (65%), Gaps = 19/359 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A L ++K+GF++CGI+ GL+GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLLGFSYADADGKFSGI 60 Query: 60 DVDF----------------CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 DVD CR++++A+F D +K++Y PL AKERF ALQS ++D+LSRN Sbjct: 61 DVDVDVDVDVDVDVDVDVDVCRSVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRN 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T WT R+ +G+AF +TY+DG GF+ H K G+ S +L GA++C+QAGT TEL +ADY Sbjct: 121 TTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADY 180 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 FKA+NMKY P+ F+R +E A + RCD D S LYAL++ P+E ++LP++ISK Sbjct: 181 FKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISK 240 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSS 283 PL P + +GD EW++IV WT +AM+ AEE+GI +N+++ + + PD+ LG + Sbjct: 241 EPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--G 298 Query: 284 NIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + G+ L L W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 299 DYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 357 >gi|115522563|ref|YP_779474.1| extracellular solute-binding protein [Rhodopseudomonas palustris BisA53] gi|115516510|gb|ABJ04494.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas palustris BisA53] Length = 347 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 162/350 (46%), Positives = 232/350 (66%), Gaps = 11/350 (3%) Query: 1 MYKDFFVSILCLIILFFTSFST--------NASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F + L + ++ T+ + + L +R + CG+N GL GF+ Sbjct: 1 MLKRTFQTGLGIGLVVATAIAAAAITYERYDTKTLKRTIRRDAVLCGVNKGLPGFSIPDD 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G W GFDVDFCRA+++AIFDDP K++++ L+A ERF LQS+++DILSRN+ W++ RE Sbjct: 61 KGSWTGFDVDFCRAVAAAIFDDPKKVKFVALDANERFKELQSRKVDILSRNSTWSMARET 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 L F + Y+DG GF++ + I S +L G+ +CVQ TTT+L +AD+F+A+N+KY Sbjct: 121 GFELYFPAVAYYDGAGFMLPASRKIDSALELDGSQVCVQDATTTQLNVADFFRANNLKYQ 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + ++EE+ AY A +C+ + DIS LYAL++ +P +H ILPD+ISK PLAP + Q Sbjct: 181 EVKAAKLEEVVKAYEAGQCNVLSADISQLYALRVNFAKPIDHTILPDVISKEPLAPVVRQ 240 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292 D +W IV WT YAM+ AEELG++ NI++ K + PDV R +G + GE LGL+ Sbjct: 241 RDDDWMMIVKWTLYAMINAEELGVSSTNIDEALK-SKKPDVMRLVGTE--GAYGEELGLS 297 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 KDW RIIRH+GNYGE+++RN+G+ S+L IPRG N LWS GG+ YAPPIR Sbjct: 298 KDWAARIIRHVGNYGEVYERNVGSDSKLGIPRGLNQLWSAGGIQYAPPIR 347 >gi|316936277|ref|YP_004111259.1| family 3 extracellular solute-binding protein [Rhodopseudomonas palustris DX-1] gi|315603991|gb|ADU46526.1| extracellular solute-binding protein family 3 [Rhodopseudomonas palustris DX-1] Length = 344 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 170/350 (48%), Positives = 233/350 (66%), Gaps = 14/350 (4%) Query: 1 MYKDFFVSILCLIILFFTSFST--------NASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M+K F + L L ++ + + L +R + CG+N GL GFA Sbjct: 1 MFKRTFQTGLALGLVVAAGIAAAAVTYERYDTKTLKRTIRRDAVLCGVNKGLPGFATPDD 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+W GFDVDFCRA+++AIFDDP+K+++LPL+A ERF LQS+++DILSRN+ W++ RE Sbjct: 61 KGNWTGFDVDFCRAVAAAIFDDPTKVKFLPLDANERFKELQSRKVDILSRNSTWSMSRET 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + L F + Y+DGQGF++ + I S +L G+ +CVQ GTTT+L LADYF+ +NM Y Sbjct: 121 NYELYFPAVAYYDGQGFMVPASRKIDSAVELDGSKVCVQNGTTTQLNLADYFRTNNMTYQ 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E+ +++ AY+ +CD +T D+S LYAL+ T +HVILPD+ISK PLAP + Q Sbjct: 181 EVKSEKFDDVVKAYKDGQCDTFTADVSQLYALRKTFANAGDHVILPDVISKEPLAPVVRQ 240 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292 D +W IV WT YAM+ AEELGIT +NI++ K + PDV R +G D GE LGL+ Sbjct: 241 RDDDWMMIVKWTLYAMINAEELGITSQNIDEALK-SKKPDVMRLVGTD--GAFGEDLGLS 297 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 KDW RI+RH+GNYGE++DRN+G L IPRG N LWS GG+ YAPPIR Sbjct: 298 KDWAARIVRHVGNYGEVYDRNVGK---LGIPRGLNQLWSNGGIQYAPPIR 344 >gi|83592118|ref|YP_425870.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC 11170] gi|83575032|gb|ABC21583.1| extracellular solute-binding protein, family 3 [Rhodospirillum rubrum ATCC 11170] Length = 350 Score = 325 bits (833), Expect = 7e-87, Method: Composition-based stats. Identities = 140/326 (42%), Positives = 203/326 (62%), Gaps = 3/326 (0%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 F+S + L IK RG +K G+ GF+ + G W+GF +D RAL+ +F+DP Sbjct: 28 FSSSAEAGETLDAIKARGVIKIGVGGNSPGFSAPDSAGRWQGFFIDIGRALAVTVFNDPE 87 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K +++ + ++R ALQS + DIL T+ R LG F P+ ++DGQG ++ KK G Sbjct: 88 KAEFVNSSPQQRLPALQSGEFDILLSGVTQTITRATKLGFHFGPVVFYDGQGLLVPKKLG 147 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+ S+L GA++CVQ GTT EL +AD+F+ H + + P+V E E A+ + RCD T Sbjct: 148 ITKGSELDGATVCVQTGTTGELNIADFFRQHKISFKPVVIEESNEFLKAFASGRCDVLTQ 207 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S L + +++V+LP+ ISK PLAPAI GD W IV+WT YA++ AEELGI Sbjct: 208 DSSDLAIRRTLLPNAADYVLLPERISKEPLAPAIRYGDDRWLEIVNWTVYALIEAEELGI 267 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 TQ I+ + NP ++RFLG+D S + EA GL + Y II+ +GNYGE+F+R++G Sbjct: 268 TQATIDSFL-GSDNPSIRRFLGVDPS--LAEATGLDAKFAYNIIKALGNYGEVFERSVGK 324 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 S+L RGYN W++GGL+Y+PP R Sbjct: 325 ASKLGFERGYNQPWTQGGLLYSPPFR 350 >gi|126731935|ref|ZP_01747738.1| ABC transporter amino acid-binding protein [Sagittula stellata E-37] gi|126707467|gb|EBA06530.1| ABC transporter amino acid-binding protein [Sagittula stellata E-37] Length = 337 Score = 325 bits (832), Expect = 8e-87, Method: Composition-based stats. Identities = 146/316 (46%), Positives = 208/316 (65%), Gaps = 2/316 (0%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L D+K G LKCG++ GL GF+ G+W G DVD+CRAL++A+ D ++Y+ L+AK Sbjct: 24 LDDVKAAGSLKCGVSQGLPGFSATNDAGEWTGIDVDYCRALAAAVLGDADAVEYVSLSAK 83 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 +RF AL S +ID+LSRNT WT+ R+ LG+ F + Y+DGQG ++ GI+S +L GA Sbjct: 84 DRFTALSSGEIDVLSRNTTWTITRDTDLGITFVGVNYYDGQGMMVPAGLGITSALELDGA 143 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 +IC GTTTEL + DYF H+M + + E +E+ AAY A RCD +T D S + A +L Sbjct: 144 TICTNTGTTTELNITDYFTQHDMSFELVALENSDEVIAAYGAGRCDVFTTDRSGVAAERL 203 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 P HV+LP+ ISK PL P++ GD +W + W ++ AEE GIT +N++++ + Sbjct: 204 KLADPDAHVVLPETISKEPLGPSVRAGDEQWMKVAKWVLNGVIEAEEYGITSENVDEMLE 263 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 + NP VQR LG ++ G LGL D+ Y+ ++ +GNYGEM+DRN+G + LK+ RG Sbjct: 264 -SENPSVQRILGA-GDNDYGAPLGLGADFVYQAVKQVGNYGEMYDRNVGPDTPLKLERGV 321 Query: 327 NALWSKGGLMYAPPIR 342 N LW+KGG MYAPPIR Sbjct: 322 NNLWNKGGFMYAPPIR 337 >gi|288962140|ref|YP_003452435.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] gi|288914406|dbj|BAI75891.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] Length = 353 Score = 325 bits (832), Expect = 8e-87, Method: Composition-based stats. Identities = 152/338 (44%), Positives = 232/338 (68%), Gaps = 4/338 (1%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + + + + +K++G+++CG+N GL GF+ G W G DVD CR Sbjct: 19 LSVSAFALSGALSGTAEAGATFDGVKQKGYVQCGVNLGLYGFSAPDDKGKWSGLDVDMCR 78 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A+++A+F D K++Y PL+A++R ALQS +IDIL+RNT TL R+ + GL F P Y+D Sbjct: 79 AVAAAVFGDAEKVKYTPLSAQQRLPALQSGEIDILARNTTRTLTRDTANGLNFAPTNYYD 138 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 GQGF++ K G+ S QL+GA++CV GTTTE ++DYF+A+ M + P+V E+ EE++ A Sbjct: 139 GQGFMVSAKLGLKSAKQLNGATVCVLPGTTTEQNVSDYFRANKMTFKPVVIEKNEELNKA 198 Query: 186 YRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + A RCDA T D S L A++ P+++VILP++ISK PL+PAI QGD EW N+V+W Sbjct: 199 FFAGRCDALTSDASQLAAIRAAEVPNPADYVILPELISKEPLSPAIRQGDEEWTNLVTWA 258 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 YAMV AEE G+T + ++ + +PDV+R LG+ ++ G+ALG+ ++W + II+ +G Sbjct: 259 FYAMVQAEEKGLTSETVDAAL-TSPDPDVKRLLGV--TAGNGKALGVEENWAFNIIKQVG 315 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NY + ++RN+G S+LK+PRG NAL+++GGLMYAPP++ Sbjct: 316 NYAQSYERNVGAGSKLKMPRGQNALYTEGGLMYAPPMK 353 >gi|317405857|gb|EFV86140.1| extracellular solute-binding protein [Achromobacter xylosoxidans C54] Length = 340 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 145/343 (42%), Positives = 228/343 (66%), Gaps = 4/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + L + + + L +KK+G+++CG+ G+ GF+ + G+W+G D Sbjct: 1 MKRLISFAAGALALACASQAAVAGPTLDAVKKKGYVQCGLTDGVSGFSATNSKGEWEGMD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A+F DP+K + L+ ++RF ALQS ++D+L R T R+ SLGL+ Sbjct: 61 VDICRAVAAAVFGDPTKFKGTALSTQQRFTALQSGEVDVLLRTVTLTQTRDTSLGLSAVA 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +++DGQG +++KK G+ S +L+GA++CVQ GTTTEL LAD+F+A+N+++ P+V ++V Sbjct: 121 ASFYDGQGILVNKKLGVKSAKELNGATVCVQPGTTTELNLADWFRANNIEFKPVVIDKVT 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ A+ + RCDA+T D S L A++ +P ++ ILP+ SK PL P + QGD W Sbjct: 181 EVVRAFESGRCDAFTDDASQLAAVRATQVAKPDDYEILPERFSKEPLGPMVRQGDENWLG 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +A++ AEE GITQKN++++ K + NP++ R LG+ + G+ +GL + W Y Sbjct: 241 IVRWTLFALLEAEEYGITQKNVDEMLK-SNNPNISRILGV--TPGAGKNMGLDEKWAYNA 297 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G S+L + RG NALWSKGG MY PIR Sbjct: 298 IKAVGNYSEVFERNVGKDSKLGLQRGTNALWSKGGAMYPWPIR 340 >gi|33600508|ref|NP_888068.1| ABC transporter substrate-binding protein [Bordetella bronchiseptica RB50] gi|33568107|emb|CAE32020.1| Putative ABC transport system, substrate-binding protein [Bordetella bronchiseptica RB50] Length = 336 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 140/342 (40%), Positives = 198/342 (57%), Gaps = 6/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ I T+ +A L D+K RG L C TG GF+ G G + Sbjct: 1 MKKTLTSLLVAAIA--HTAAPVHAGTLEDVKARGNLLCSSTTGSPGFSMPDDAGKRHGLE 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A+F DP + + + LN +RF ALQS ++DIL T WTL RE + L Sbjct: 59 VDVCRAIATAVFGDPERHKIVVLNPTQRFTALQSGEVDILFNTTTWTLSREGAGALYAGV 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I+S +L G +IC G+TTEL L D+F+A+ + I F V+ Sbjct: 119 TYYDGQGVLVRK--GTIASAKELDGGAICTNQGSTTELNLVDFFRANKVSNEVITFATVQ 176 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AY + RCDA++ D L AL+ P +HVIL D +SK PL A+ +GD W+++ Sbjct: 177 EAANAYESGRCDAWSADAGILAALRSKMKAPDDHVILADRLSKEPLGAAVRKGDDAWFSV 236 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ +A+ AEELG+T KNI + +K TTNP+V RF+G + ++G+ LGL DW Y+I+ Sbjct: 237 VRWSIFALQAAEELGLTSKNIAEQAKSTTNPEVLRFVGKE--GSLGKVLGLNGDWAYQIV 294 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +G+Y E+FDRN+G S L + RG NA W GGL Y PP R Sbjct: 295 AQVGSYAEIFDRNIGAASPLNLERGINASWKNGGLFYTPPFR 336 >gi|311108222|ref|YP_003981075.1| general L-amino acid-binding periplasmic protein AapJ 1 [Achromobacter xylosoxidans A8] gi|310762911|gb|ADP18360.1| general L-amino acid-binding periplasmic protein AapJ 1 [Achromobacter xylosoxidans A8] Length = 340 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 146/343 (42%), Positives = 228/343 (66%), Gaps = 4/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + L + + + L +KK+GF++CG+ G+ GF+ + G+W+G D Sbjct: 1 MKRSILFAASALALACASQAAVAGPTLDAVKKKGFVQCGLTDGVSGFSATNSKGEWEGMD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A+F DP+K + PL+ ++RF ALQS ++D+L R T R+ SLGLA Sbjct: 61 VDICRAVAAAVFGDPTKFKGTPLSTQQRFTALQSGEVDVLLRTVTLTQTRDTSLGLAAVA 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +++DGQG +++KK G+ S +L+GA++CVQ GTTTEL LAD+F+ +N+++ P+V ++V Sbjct: 121 ASFYDGQGILVNKKLGVKSAKELNGATVCVQPGTTTELNLADWFRTNNIEFKPVVIDKVT 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ A+ + RCDA+T D S L A++ +P ++ ILP+ SK PL P + QGD W Sbjct: 181 EVVRAFESGRCDAFTDDSSQLAAVRATQVAKPDDYEILPERFSKEPLGPMVRQGDENWLG 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +A++ AEE GITQKN++++ K + NP++ R LG+ + G+ +GL + W Y Sbjct: 241 IVRWTLFALMEAEEYGITQKNVDEMLK-SNNPNIARILGV--TPGAGKNMGLDEKWAYNA 297 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G S+L + RG NALW+KGG MY PIR Sbjct: 298 IKAVGNYSEVFERNVGKDSKLGLQRGTNALWNKGGAMYPWPIR 340 >gi|114766874|ref|ZP_01445796.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Pelagibaca bermudensis HTCC2601] gi|114540920|gb|EAU43980.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. HTCC2601] Length = 339 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 146/343 (42%), Positives = 214/343 (62%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L + + + +A+ L D+K RG L CG++TGL GF+ ANG W+GFD Sbjct: 1 MKNTVILG--ALTVAGLAAGAASAATLDDVKARGNLNCGVSTGLTGFSAPDANGVWQGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ DP ++++ + RF AL S +ID+L+RNT WT R+ L F Sbjct: 59 VAVCRAVAAAVLGDPMAVEFVSTTGQTRFTALASGEIDMLARNTTWTFSRDNDLKFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ K+ G+SS +L GA++C+Q GTTTEL LAD+F+ +N+ Y P+ E Sbjct: 119 VNYYDGQGFMIPKELGVSSAKELDGATVCIQTGTTTELNLADFFRVNNINYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E Y A CD YT D S L A + + + P +HVILP+IISK PL P + GD EW +I Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRASFETPGDHVILPEIISKEPLGPLVRHGDNEWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTN-PDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 WT A++ AEE G+T NI ++S T+ P++ R LG + +G +GL DW + Sbjct: 239 ARWTLNALIAAEEYGVTSANIEELSSAPTDNPEINRLLGTE--GELGAMIGLEADWAKKA 296 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I GNYGE+F++ +G + + + RG NA W++GGLMY+PP R Sbjct: 297 IMANGNYGEIFEKTIGENTPIGLSRGLNAQWTEGGLMYSPPFR 339 >gi|315499877|ref|YP_004088680.1| extracellular solute-binding protein family 3 [Asticcacaulis excentricus CB 48] gi|315417889|gb|ADU14529.1| extracellular solute-binding protein family 3 [Asticcacaulis excentricus CB 48] Length = 370 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 146/330 (44%), Positives = 220/330 (66%), Gaps = 4/330 (1%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 T ++++ L + RG + CG++ GL+GF+ +G W+GFDVDFCRAL++AIF D Sbjct: 43 ATLTPTQSDSATLKAVLARGRVSCGVHPGLIGFSYKDNSGRWRGFDVDFCRALAAAIFSD 102 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K+ Y+PL ERF AL++ ++D+L R+T WTL R+ + + + I Y+DGQGF++ K Sbjct: 103 ADKVTYVPLTTTERFEALKTGKVDVLWRSTSWTLSRDAADQVDYAGINYYDGQGFLVRKS 162 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 ++S ++L+GA ICVQ G+T+EL LAD+F+A +KY+P+V + +E AY A +CDA Sbjct: 163 LRLNSATELNGARICVQTGSTSELNLADFFRARGLKYNPVVVKNEDEGRDAYAAGQCDAL 222 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + D+SAL A + T P+ H ILP+IISK PL P + QGD +W +IV WT Y + AEEL Sbjct: 223 SSDVSALAAARATLSDPTAHTILPEIISKEPLGPVVRQGDDQWTDIVRWTLYVTIVAEEL 282 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 G++ + + ++ NP+V+R LG + + G L +W Y I+ +GNYGE+FDRN+ Sbjct: 283 GVSSETVKAQQLESQNPEVRRLLGSEGNLGGGLGL--GPEWAYNILSQVGNYGEIFDRNI 340 Query: 315 GNQSELKIPRGYNALWS--KGGLMYAPPIR 342 G S LK+ RG NA W+ + GL+Y+PP+R Sbjct: 341 GADSPLKLSRGLNAQWNAPERGLLYSPPVR 370 >gi|158422580|ref|YP_001523872.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] gi|158329469|dbj|BAF86954.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] Length = 336 Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats. Identities = 156/342 (45%), Positives = 226/342 (66%), Gaps = 6/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +++ + FT+ + A L +K RG L CG++TG+ GF+ + +G W GFD Sbjct: 1 MK--TLFALVAGAAVAFTAPAAMAQTLKAVKDRGTLNCGVSTGIPGFS-QQVDGKWSGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDFCRA+++A+ +DP+K+ ++PLNA++RF AL ++D+LSRNT WTL RE F Sbjct: 58 VDFCRAVAAAVLNDPAKVNFVPLNAEDRFTALSGSKVDLLSRNTTWTLEREAKQKFLFGA 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +TYFDGQGF++ + I S +L G+ +CVQ GTT DYFK +NMK + V+ Sbjct: 118 VTYFDGQGFLVPAARKIESALELDGSKVCVQVGTTAASYAEDYFKTNNMKLELVTLPTVQ 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ AY C+ + D+SALYAL+ +P+ H++LPD+I+K PL P + QGD EW+N+ Sbjct: 178 DLVKAYENGTCNTISTDVSALYALRTGFAKPASHIVLPDVITKEPLGPVVRQGDDEWFNV 237 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WTHY M+ EELG++ ++++ K + PDV+R +G D + G LGLTKD+ RII Sbjct: 238 VKWTHYVMINGEELGVSSLSLDEALK-SQKPDVKRLVGTD--GDFGTELGLTKDFAVRII 294 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 R +GNYGE F+RN+G S+L IPRG N LWS GG+ YAPP+R Sbjct: 295 RAVGNYGEAFERNIGTGSKLAIPRGVNQLWSAGGIQYAPPVR 336 >gi|317403931|gb|EFV84400.1| L-amino acid ABC transporter [Achromobacter xylosoxidans C54] Length = 338 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 146/326 (44%), Positives = 218/326 (66%), Gaps = 3/326 (0%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T + L +KKRG+++CG++TG+ GF+ + G+W+G DVD CRA+++ IF+D S Sbjct: 16 VTGLAHAGPTLDTVKKRGYVQCGVSTGIQGFSSPDSKGNWQGLDVDMCRAIAATIFNDAS 75 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K + PL + RF ALQS ++D+L+RN T+ R+ +LGL + Y+D QG ++ + G Sbjct: 76 KFRLTPLTTQARFTALQSGEVDVLTRNVTPTMARDTTLGLISTGVNYYDSQGVMVSARLG 135 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + + +L GA+ICVQ GT TEL LAD+F+A+ +K+ P+V ++ +EI A+ A RCDA+T Sbjct: 136 VRKLKELDGATICVQPGTVTELDLADWFRANGLKFKPVVIDKYDEIVRAFSAGRCDAFTS 195 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D S L A + T + P +VIL + I+KSPL P + QGD W+N+V WT AM+ AEE G+ Sbjct: 196 DKSQLAASRTTLEHPDNYVILDENIAKSPLGPMVRQGDDNWFNVVRWTLNAMLEAEEFGV 255 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 T N++ K +TNP+VQR LG+ + +G+ LG+ W Y I++ +GNYGE ++RNLG Sbjct: 256 TSANVDSQLK-STNPNVQRILGV--TPGMGKNLGVDDKWAYNIVKQVGNYGESYERNLGM 312 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 S +K+PRG NA W GG MY P+R Sbjct: 313 ASAMKLPRGLNAQWRDGGQMYGWPVR 338 >gi|33596740|ref|NP_884383.1| ABC transporter substrate-binding protein [Bordetella parapertussis 12822] gi|33573441|emb|CAE37426.1| Putative ABC transport system, substrate-binding protein [Bordetella parapertussis] Length = 336 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 140/342 (40%), Positives = 198/342 (57%), Gaps = 6/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ I T+ +A L D+K RG L C TG GF+ G G + Sbjct: 1 MKKTLTSPLVAAIA--HTAAPVHAGTLEDVKARGNLLCSSTTGSPGFSMPDDAGKRHGLE 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A+F DP + + + LN +RF ALQS ++DIL T WTL RE + L Sbjct: 59 VDVCRAIATAVFGDPERHKIVVLNPIQRFTALQSGEVDILFNTTTWTLSREGAGALYAGV 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I+S +L G +IC G+TTEL L D+F+A+ + I F V+ Sbjct: 119 TYYDGQGVLVRK--GTIASAKELDGGAICTNQGSTTELNLVDFFRANKVSNEVITFATVQ 176 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AY + RCDA++ D L AL+ P +HVIL D +SK PL A+ +GD W+++ Sbjct: 177 EAANAYESGRCDAWSADAGILAALRSKMKAPDDHVILADRLSKEPLGAAVRKGDDAWFSV 236 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ +A+ AEELG+T KNI + +K TTNP+V RF+G + ++G+ LGL DW Y+I+ Sbjct: 237 VRWSIFALQAAEELGLTSKNIAEQAKSTTNPEVLRFVGKE--GSLGKVLGLNGDWAYQIV 294 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +G+Y E+FDRN+G S L + RG NA W GGL Y PP R Sbjct: 295 AQVGSYAEIFDRNIGAASPLNLERGINASWKNGGLFYTPPFR 336 >gi|92119138|ref|YP_578867.1| extracellular solute-binding protein [Nitrobacter hamburgensis X14] gi|91802032|gb|ABE64407.1| amino acid ABC transporter substrate-binding protein, PAAT family [Nitrobacter hamburgensis X14] Length = 345 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 169/341 (49%), Positives = 233/341 (68%), Gaps = 6/341 (1%) Query: 5 FFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + + + + + + L +R + CG+NTGL GF+ V G+W GFDV Sbjct: 8 LLIGLAIATAIAVMAVTYERYDTKTLKRTLRRDAVLCGVNTGLPGFSNVDEKGNWSGFDV 67 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 DFCRA+++AIFDDP+K++++PL A ERF LQS+++DIL+RN+ W++ RE + L F + Sbjct: 68 DFCRAVAAAIFDDPAKVKFVPLAADERFKELQSRKVDILARNSTWSMSRETNFDLYFPAV 127 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y+DG+GF++ + +S L G ICVQ GTTT+L LADYFKA+N+ Y I F ++E+ Sbjct: 128 AYYDGEGFMVRTSRKAASALDLGGTKICVQDGTTTKLNLADYFKANNLTYEEIKFGKLED 187 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + AY +CD T D++ LYA++L +PSE ILPD+ISK PLAP + Q D +W IV Sbjct: 188 MLKAYDEAKCDVVTSDVAQLYAMRLRLTKPSESFILPDVISKEPLAPVVRQRDDDWMMIV 247 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 WT YAMV AEELG+T KNI++ K + PDV R +G + GEALGLTKDW RIIR Sbjct: 248 KWTLYAMVNAEELGVTSKNIDEAMK-SKKPDVMRLVGTE--GAYGEALGLTKDWAARIIR 304 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 H+GNYGE++DRN+G S+LKIPRG N LW+ GG+MYAPP+R Sbjct: 305 HVGNYGEVYDRNVGADSKLKIPRGLNQLWNAGGIMYAPPLR 345 >gi|319940740|ref|ZP_08015081.1| extracellular solute-binding protein, family 3 [Sutterella wadsworthensis 3_1_45B] gi|319805800|gb|EFW02574.1| extracellular solute-binding protein, family 3 [Sutterella wadsworthensis 3_1_45B] Length = 340 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 144/342 (42%), Positives = 217/342 (63%), Gaps = 2/342 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + S + ++L I+ L CG+NT GF+ + G W+G D Sbjct: 1 MKTTLLSAAVVAAAATAASPAFAGAVLDKIRANDQLVCGVNTSAPGFSSADSKGHWEGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ CR++++A+ + K++Y+PL++ + AL S QID+L+RNT WT+ R+ S G F Sbjct: 61 VNLCRSVAAAVLGNADKVKYVPLSSTQHMTALASGQIDMLARNTTWTMTRDASHGNVFVA 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ++Y+DGQ F++ K G+ S+ +L GA++CVQ GTTTE T ADYF++H M+Y +VF+ E Sbjct: 121 VSYYDGQAFMVPKSLGVKSLKELDGATVCVQTGTTTEKTTADYFRSHGMQYKTVVFDTTE 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + RCDAYT D+S L ++ PS+ ILP+ I+K PL PA+ +GD E++ I Sbjct: 181 ATQGAFLSGRCDAYTSDMSDLAGVRTVAQDPSKFDILPETITKEPLGPAVRRGDWEFFEI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ A + AEELG+TQ N++ + K + +P+V R +G ++G LGL KDW+YRII Sbjct: 241 VRWSFMAFLNAEELGVTQANVDDMRKTSKDPNVMRLVGT--GEDMGRMLGLDKDWSYRII 298 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE + + G S L +PRG N LW+ GGLMYA PIR Sbjct: 299 KQVGNYGESWTKYFGPTSPLNLPRGMNKLWTDGGLMYAMPIR 340 >gi|311108521|ref|YP_003981374.1| general L-amino acid-binding periplasmic protein AapJ 2 [Achromobacter xylosoxidans A8] gi|310763210|gb|ADP18659.1| general L-amino acid-binding periplasmic protein AapJ 2 [Achromobacter xylosoxidans A8] Length = 338 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 145/342 (42%), Positives = 222/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M++ + +I L + +S + L ++KRG+L+CG++TG+ GF+ + G W G D Sbjct: 1 MHRRTY-AICALALAAVSSQAFAGPTLDTVRKRGYLQCGVSTGIQGFSAPDSKGTWHGLD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++ +F+D +K + PL + RF ALQS ++D+L+RN T+ R+ +LGL Sbjct: 60 VDMCRAIAATVFNDATKYRLTPLTTQARFTALQSGEVDVLTRNVTPTMARDTTLGLLSVA 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+D QG ++ K G+ + +L GA++CVQ GT TEL LAD+F++ ++++ P+V E+ + Sbjct: 120 VNYYDSQGVMVSDKLGVKKLRELDGATVCVQPGTVTELDLADWFRSQSLRFKPVVIEKYD 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 EI A+ A RCDA+T D S L A ++T + P +VIL + ISKSPL P + QGD W NI Sbjct: 180 EIVRAFSAGRCDAFTSDKSQLAASRMTLENPESYVILDENISKSPLGPMVRQGDDNWINI 239 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ AM+ AEE GIT N++ K + P+VQR LG+ + +G +G+ W Y I+ Sbjct: 240 VRWSLNAMLEAEEFGITSSNVDAQLKANS-PNVQRILGV--TPGMGRNMGVDDKWAYNIV 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGE ++RNLG S +K+PR NA W GGLMY P+R Sbjct: 297 KQVGNYGESYERNLGMSSPMKLPRALNAQWRDGGLMYGWPVR 338 >gi|75677073|ref|YP_319494.1| extracellular solute-binding protein [Nitrobacter winogradskyi Nb-255] gi|74421943|gb|ABA06142.1| amino acid ABC transporter substrate-binding protein, PAAT family [Nitrobacter winogradskyi Nb-255] Length = 345 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 168/320 (52%), Positives = 226/320 (70%), Gaps = 3/320 (0%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + L +R + CG+NTGL GF+ G+W GFDVDFCRA+++AIFDDPSK++++P Sbjct: 29 DTKTLKRTLRRDAVLCGVNTGLPGFSSSDEKGNWSGFDVDFCRAVAAAIFDDPSKVKFVP 88 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L A ERF LQS+++DIL+RN+ W++ RE + L F + Y+DG+GF++ + S Sbjct: 89 LAADERFKELQSRKVDILARNSTWSMSRETNFNLYFPAVAYYDGEGFMVRTSRKADSALD 148 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L ICVQ+ TTT+L LADYF+A+N+KY I FE++E++ AY RCD T D+S LY Sbjct: 149 LGDTKICVQSATTTQLNLADYFRANNLKYEEIRFEKLEDVLRAYDEARCDVVTADVSQLY 208 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 AL+L +P+E ILPD+ISK PLAP + Q D +W I+ WT YAM+ AEELG+T KNI+ Sbjct: 209 ALRLRLTKPNESFILPDVISKEPLAPVVRQRDDDWMMIIKWTLYAMINAEELGVTSKNID 268 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 + K T PDV R +G + GEALGLTKDW RIIRH+GNYGE++DRN+G +S LKI Sbjct: 269 EAMKSTK-PDVMRLVGTE--GQYGEALGLTKDWAARIIRHVGNYGEVYDRNIGTESRLKI 325 Query: 323 PRGYNALWSKGGLMYAPPIR 342 PRG N W+ GG+MYAPP+R Sbjct: 326 PRGLNQPWNAGGIMYAPPLR 345 >gi|293607066|ref|ZP_06689409.1| general amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292814556|gb|EFF73694.1| general amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 340 Score = 322 bits (824), Expect = 7e-86, Method: Composition-based stats. Identities = 146/343 (42%), Positives = 226/343 (65%), Gaps = 4/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + L + + + L +KK+GF++CG+ G+ GF+ + G+W+G D Sbjct: 1 MKRSTLFAAGALALACASQAAIAGPTLDAVKKKGFVQCGLTDGVSGFSATNSKGEWEGMD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A+F DPSK + L+ ++RF ALQS ++D+L R T R+ SLGL+ Sbjct: 61 VDICRAVAAAVFGDPSKFKGTALSTQQRFTALQSGEVDVLLRTVTLTQTRDTSLGLSAVA 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +++DGQG +++KK G+ S +L+GA++CVQ GTTTEL LAD+F+A+ +++ P+V ++V Sbjct: 121 ASFYDGQGILVNKKLGVKSAKELNGATVCVQPGTTTELNLADWFRANKIEFKPVVIDKVT 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ A+ + RCDA+T D S L A++ +P ++ ILP+ SK PL P + QGD W Sbjct: 181 EVVRAFESGRCDAFTDDSSQLAAVRATQVAKPDDYEILPERFSKEPLGPMVRQGDENWLG 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +A++ AEE GITQKN++++ K + NP+V R LG+ + G+ +GL + W Y Sbjct: 241 IVRWTLFALLEAEEYGITQKNVDEMLK-SNNPNVLRILGV--TPGAGKNMGLDEKWAYNA 297 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY E+F+RN+G S+L + RG NALWS GG MY PIR Sbjct: 298 IKAVGNYSEVFERNVGKDSKLGLARGTNALWSNGGAMYPWPIR 340 >gi|227327916|ref|ZP_03831940.1| general L-amino ABC transporter binding protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 305 Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats. Identities = 152/305 (49%), Positives = 216/305 (70%), Gaps = 2/305 (0%) Query: 38 CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 CGI+ GL GF+ A+G + G DVD CR L++A+F D +K++Y PL AKERF ALQS ++ Sbjct: 3 CGISDGLPGFSYADASGKYSGIDVDVCRGLAAAVFGDANKVKYTPLTAKERFTALQSGEV 62 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 D+LSRNT WT R+ +G+ F +TY+DG GF+ H K G++S +L GA++C+QAGT TE Sbjct: 63 DVLSRNTTWTSSRDGGMGMLFTGVTYYDGIGFLTHNKAGLTSAKELDGATVCIQAGTDTE 122 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 L +ADYFK H M+Y P+ F+R +E A + RCD D S LYAL++ +P+E ++L Sbjct: 123 LNVADYFKTHKMQYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSKPAEFIVL 182 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 P++ISK PL P + +GD EW+ IV WT +AM+ AEE+G+T KN++Q++ T PD+ L Sbjct: 183 PEVISKEPLGPVVRRGDEEWFAIVRWTLFAMLNAEEMGVTSKNVDQLAAKPTTPDMSHLL 242 Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337 G + + G+ L L DW ++II+ +GNYGE+F+RN+G SELKI RG N LW+KGG+ Y Sbjct: 243 GHE--GSYGKDLKLPNDWAFKIIKQVGNYGEIFERNVGMGSELKIKRGLNELWNKGGIQY 300 Query: 338 APPIR 342 AP +R Sbjct: 301 APAVR 305 >gi|297567745|ref|YP_003686716.1| hypothetical protein Mesil_3397 [Meiothermus silvanus DSM 9946] gi|296852194|gb|ADH65208.1| hypothetical protein Mesil_3397 [Meiothermus silvanus DSM 9946] Length = 345 Score = 321 bits (823), Expect = 9e-86, Method: Composition-based stats. Identities = 140/349 (40%), Positives = 215/349 (61%), Gaps = 11/349 (3%) Query: 1 MYKDF---FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDW 56 M K + + + + + S L +K RG L CG+N L GF + G Sbjct: 1 MIKAWRKPLLLVAVVAYVLTGMGLAQQSRLDVVKGRGKLVCGVNARLPGFGFLDEKTGKA 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVDFCRA+++A+FDDP K++Y+PL+A+ RF A+Q+ ++D+ RNT T R+ ++G+ Sbjct: 61 TGFDVDFCRAVAAALFDDPEKVEYVPLDARVRFQAVQNGEVDVAFRNTTVTSSRDGAVGV 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-PIV 175 F P+T++DGQG ++ K SS+ +L GA+ C GTT E ++DY ++ + + Sbjct: 121 DFLPVTFYDGQGVMVKKG-KASSLRELEGATFCTTQGTTNEKNISDYIRSRRWRNTRLLT 179 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 FE +++ AA RCDA+T D S L + T P + +IL + ISK PLA + + D+ Sbjct: 180 FEDGQKVFAALLEGRCDAFTADKSQLVGYRGTASNPDDLLILRETISKEPLAGMVRENDS 239 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295 W + ++W YA + AEE GIT KN++Q +K + P+V+RFLG++ +G+ LGL D+ Sbjct: 240 RWRDALTWIVYATIQAEEFGITVKNLDQQTK-SDVPEVRRFLGLE--GTLGKDLGLPPDF 296 Query: 296 TYRIIRHMGNYGEMFDRNLGNQSELKIPRG--YNALWSKGGLMYAPPIR 342 RI+RH+GNYGE++DR G +S IPR NAL++KGGL+Y+PP R Sbjct: 297 AVRIVRHVGNYGEIYDRYFGPKSAFAIPRAGTLNALYNKGGLLYSPPFR 345 >gi|220914746|ref|YP_002490054.1| extracellular solute-binding protein family 3 [Methylobacterium nodulans ORS 2060] gi|219952497|gb|ACL62887.1| extracellular solute-binding protein family 3 [Methylobacterium nodulans ORS 2060] Length = 341 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 137/347 (39%), Positives = 224/347 (64%), Gaps = 11/347 (3%) Query: 1 MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + +IL + F + + + + DI+ RG L CG+ G GF+ + G Sbjct: 1 MNRVLAGAILFGALAAFADPSWAQGSGSKTIDDIRARGQLVCGVTAGAAGFSLPDSRGVM 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +G D D CRA+++A + K++Y+P RF ALQS +IDIL R+T WTL RE +LGL Sbjct: 61 RGIDADICRAVAAATLGEADKVRYVPTTVTNRFTALQSGEIDILVRSTTWTLSREANLGL 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + +FDG GF+++K G+ S +L+GA+IC+Q GT+TEL +ADYF+ H MK+ PI+ Sbjct: 121 EFAGVYFFDGTGFMVNKSLGVKSSKELNGATICIQPGTSTELAVADYFREHGMKFKPILI 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDT 235 + E + + RCDAY+ DISAL + + + ++V+LP++ISK P+ + +GD Sbjct: 181 QDPAETQNTFISGRCDAYSMDISALASFRFQQGPKKDDYVLLPEVISKEPVGVMVRKGDE 240 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295 +++++V W+ A++ EE G+TQ N++Q+ D+ +P ++R LG++ ++G+A+G+ W Sbjct: 241 KFFDLVRWSMIALLQGEESGVTQANVDQML-DSKDPTIRRMLGLE--GDLGKAMGVDNKW 297 Query: 296 TYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 Y+I++ +GN+GE+++RN+ + L I RG NALW+KGGL Y PP+R Sbjct: 298 AYKILKSVGNFGEIWERNI---APLGISRGINALWTKGGLHYPPPMR 341 >gi|317405707|gb|EFV86003.1| L-amino acid ABC transporter [Achromobacter xylosoxidans C54] Length = 338 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 144/340 (42%), Positives = 222/340 (65%), Gaps = 3/340 (0%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K +L + ++ +K +GF++CG++TG+ GF+ + G W G DVD Sbjct: 2 KALTTVAAGAALLLSSWGASAGVTFESVKNKGFVQCGVSTGVAGFSVNDSKGGWMGLDVD 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 CRAL+ +F D SK + + ++A +RF ALQS ++D+L RNT +L R+ +LGL + Sbjct: 62 LCRALAVTMFGDASKAKIMAVSAVQRFTALQSGEVDVLPRNTTLSLTRDTTLGLIGVGVN 121 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+D QG +++K + S +L GA++CVQ GTTTEL L+D+F++ N+ + P+V ER++EI Sbjct: 122 YYDSQGIMVNKSLNVKSAKELDGATVCVQPGTTTELNLSDWFRSQNIAFKPVVVERLDEI 181 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A+ RCDA+TGD S L A + + P ++ ILP+ SK PL P + QGD +W+N+V Sbjct: 182 IRAFAVGRCDAFTGDKSQLAAARTNLENPEKYDILPENFSKEPLGPMVRQGDEQWFNVVR 241 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 WT +AM+ AEE G+T KN++++ K +TNP+VQR LG+ + +G+ LG+ W Y +I+ Sbjct: 242 WTMFAMLEAEEYGVTSKNVDEMLK-STNPNVQRLLGV--TPGMGKNLGVDDKWAYNVIKQ 298 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F++NLG S +K+ RG NA + GGLMY P+R Sbjct: 299 IGNYGESFEKNLGATSPMKLSRGLNASYRNGGLMYGWPVR 338 >gi|253690349|ref|YP_003019539.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756927|gb|ACT15003.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 350 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 134/326 (41%), Positives = 204/326 (62%), Gaps = 4/326 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + + N L IK RG L CG++ GF+ + + G W G DVD+CRAL++A+F D +K Sbjct: 28 AADAGNGETLKKIKARGELVCGVHPARHGFSAIDSKGQWTGLDVDYCRALAAAVFGDANK 87 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +++ L+ +RF A+QS ++D+LSRN L R+ SLGL F P T++ G GF++ + Sbjct: 88 VRFAALSTAQRFPAIQSGEVDVLSRNITADLSRDTSLGLNFAPPTFYTGTGFMVRTSANV 147 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 V L GA++C+ G++TE +A F + N+ Y P+V E +E AAY + RCD D Sbjct: 148 KKVEDLDGATVCITPGSSTERNVAQIFASRNLHYTPVVIENNKEYVAAYLSGRCDVIARD 207 Query: 198 ISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 AL ++ ++PS+HVILP I SK PLA A+ QGD +WY+IV W YA AEE+ I Sbjct: 208 KVALPGVRTFDAEKPSDHVILPGIYSKEPLAMAVRQGDDQWYDIVKWVVYATFNAEEMEI 267 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 Q+N++ K +T+PD+Q LG+ + + G+ LGL+ W Y +I+ +GNY ++++R+ G Sbjct: 268 GQQNVDSKLK-STDPDIQALLGV--TGDYGQKLGLSNQWAYNVIKQVGNYSDIYNRHFGP 324 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 + + R N LW+KGGL+Y PIR Sbjct: 325 DTPAPLERDLNNLWTKGGLLYGLPIR 350 >gi|85714820|ref|ZP_01045806.1| extracellular solute-binding protein, family 3 [Nitrobacter sp. Nb-311A] gi|85698306|gb|EAQ36177.1| extracellular solute-binding protein, family 3 [Nitrobacter sp. Nb-311A] Length = 345 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 162/341 (47%), Positives = 228/341 (66%), Gaps = 6/341 (1%) Query: 5 FFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + + + + + + L +R + CG+N G+ GF+ G+W GFDV Sbjct: 8 LLIGLAIATAIAVMAITYERYDTKTLKRTLRRDAVLCGVNAGVPGFSNSDEKGNWSGFDV 67 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 DFCRA+++AIFDDP+K++++PL + ERF LQS+++DIL+RN+ W++ RE + L F + Sbjct: 68 DFCRAVAAAIFDDPAKVKFVPLESDERFKELQSRKVDILARNSTWSMSRETNYNLYFPAV 127 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y+DG+GF++ + S L ICVQ TTT+L LADYFKA+N+KY I F ++E+ Sbjct: 128 AYYDGEGFMVRTSRKADSALDLGDTKICVQDSTTTKLNLADYFKANNLKYEEIKFGKLED 187 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + AY +CD T D+S LYAL+L +P+E ILPD+ISK PLAP + Q D +W I+ Sbjct: 188 MLRAYDEAKCDVLTADVSHLYALRLRLTKPNESFILPDVISKEPLAPVVRQRDDDWMMII 247 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 WT YAM+ AEELG+T KNI++ K + PDV R +G D GE LGLTKDW RI+R Sbjct: 248 KWTLYAMINAEELGVTSKNIDEAMK-SKKPDVMRLVGTD--GQYGEGLGLTKDWAARIVR 304 Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 H+GNYGE++DRN+G+ S LKIPRG N LW+ GG+MYAPP+R Sbjct: 305 HVGNYGEVYDRNIGSDSRLKIPRGLNQLWNAGGIMYAPPLR 345 >gi|296387623|ref|ZP_06877098.1| putative amino acid-binding protein [Pseudomonas aeruginosa PAb1] Length = 305 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 150/305 (49%), Positives = 217/305 (71%), Gaps = 2/305 (0%) Query: 38 CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 CG++ GL GF+ A G +KG DVD CRAL++A+F D K+++ PL+A ERF ALQS + Sbjct: 3 CGVSDGLPGFSYADAKGRFKGLDVDICRALAAALFGDAEKVRFTPLSATERFSALQSGTV 62 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 D+LSRNT WT R+ +LG+ F +TYFDGQGF++++K G+SS +L ++C+Q+GTT E Sbjct: 63 DLLSRNTSWTSSRDTALGIHFTGVTYFDGQGFLVNRKLGVSSARELKDTTVCIQSGTTNE 122 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 L +ADYF+AH ++Y ++ + E+ A A +CD + D S LYA +L +P ++V+L Sbjct: 123 LNVADYFRAHGIRYKAVLDDSYEKSARALEAGQCDVLSSDQSQLYAQRLKLAKPEQYVVL 182 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 P++ISK PL PA+ QGD W+NIV WT Y ++ AEELG+T N+ + ++D+ NPDV R L Sbjct: 183 PEVISKEPLGPAVRQGDEAWFNIVRWTLYGLLNAEELGVTSSNVERQARDSRNPDVARLL 242 Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337 G + + G+ L L +DW +++R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL Y Sbjct: 243 GSE--GDAGKDLQLPRDWVVQMVRQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGLHY 300 Query: 338 APPIR 342 APPIR Sbjct: 301 APPIR 305 >gi|317970283|ref|ZP_07971673.1| extracellular solute-binding protein [Synechococcus sp. CB0205] Length = 354 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 135/351 (38%), Positives = 206/351 (58%), Gaps = 13/351 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++ L L T + S L +K RG L CG++ L GF+ V +G ++ Sbjct: 6 RKVLRALPLLAGLVLTGCAVEGSGPQSQKLAAVKARGQLVCGVDGKLPGFSFVAPDGRYQ 65 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL- 116 GF+VD CRA+++ + DP+K+++ L+A ERF A+ S ++D+LSR+T TL R+ + G Sbjct: 66 GFEVDLCRAVAAGVLSDPAKVEFRDLSASERFAAVNSGEVDLLSRSTTMTLSRDAAGGNA 125 Query: 117 -AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 +F PI ++ GQ +++ GI+ + QL+G ICV GTTTEL LAD + N Y P+ Sbjct: 126 LSFAPIHFYGGQAVMVNAGSGITYLKQLAGKPICVTTGTTTELNLADRMRELNAAYMPLK 185 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + AY RC A T D + L A + + P HV+L +SK PLA + GD Sbjct: 186 FQNDGQTYGAYLQGRCVAVTSDRALLAAKRSSFPDPKAHVLLAGDLSKEPLAMGTVNGDP 245 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGEALGL 291 W + V W YA++ AEE GITQ N+ + D+ D++RFLG+D +G+ LGL Sbjct: 246 AWADAVRWIAYALMQAEESGITQANVEAKLAEAQADSNQADLRRFLGVD--GQLGQQLGL 303 Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 D+ ++I+ +GNYGE+F+RNLG + + + RG N W+ GGL+Y+PP R Sbjct: 304 PADFVVQVIKAVGNYGEIFERNLGVNTRINLERGTNRQWTDGGLIYSPPFR 354 >gi|39935694|ref|NP_947970.1| polar amino acid ABC transport substrate-binding protein AapJ-2 [Rhodopseudomonas palustris CGA009] gi|39649547|emb|CAE28069.1| polar amino acid ABC transport substrate-binding protein, aapJ-2 [Rhodopseudomonas palustris CGA009] Length = 340 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 141/319 (44%), Positives = 197/319 (61%), Gaps = 7/319 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L IK RG +K G+ G+ +NG W+GF VDF RAL+ +F DP K+Q+ Sbjct: 29 GPTLDRIKSRGVIKVGV-GTTPGYFAPDSNGRWQGFFVDFGRALAVTVFGDPDKVQFTSS 87 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + ++R ALQS + D+L T+ R LG F P ++DGQG ++ K G++S SQL Sbjct: 88 SPQQRLPALQSGEFDVLLSGVTVTITRAFKLGFHFGPTIFYDGQGILVRKDLGVTSASQL 147 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA+I +Q+GTT EL +ADYF+ H K+ P+ E E AA + R D T D S L A Sbjct: 148 DGATIGIQSGTTGELNIADYFRKHRHKFTPVTIEDTSEFIAALDSGRVDGLTQDASDLAA 207 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + +PS++VILP+ +SK PLAPA+ GD W IV+WT A + AEE GIT KN++ Sbjct: 208 KQTQLKKPSDYVILPERLSKEPLAPAVAGGDDRWLEIVTWTVNATIQAEEWGITSKNVDD 267 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 K + +P ++RFLG+D S + E++GL W Y II+ +GNYGE+FDR+L L Sbjct: 268 FLK-SDDPSIRRFLGVDPS--LAESIGLDPKWAYTIIKTVGNYGEIFDRHL---KPLGWE 321 Query: 324 RGYNALWSKGGLMYAPPIR 342 RGYN LW++GGL+Y+PP R Sbjct: 322 RGYNRLWTQGGLLYSPPFR 340 >gi|299134008|ref|ZP_07027201.1| extracellular solute-binding protein family 3 [Afipia sp. 1NLS2] gi|298590755|gb|EFI50957.1| extracellular solute-binding protein family 3 [Afipia sp. 1NLS2] Length = 350 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 161/333 (48%), Positives = 224/333 (67%), Gaps = 3/333 (0%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + + F + L KRG + CG+N GL GFA ANG+W GFDVD CRA+++ Sbjct: 21 IVAVGAFTALDRYDTQTLKRTVKRGAVNCGVNAGLPGFANKDANGNWSGFDVDICRAVAA 80 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 A+FDD +K+ ++PL+ +RF LQ++++DILSRN+ W++ RE+ L F ++Y+DG+GF Sbjct: 81 AVFDDATKVNFIPLDTNQRFKELQNRKVDILSRNSTWSMSREVDYDLTFAAVSYYDGEGF 140 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ + + + S +L G +CVQ+ TTT+L LADYFK +N+ Y + F V ++ AY A Sbjct: 141 MVRRSRNVDSALELGGTRVCVQSDTTTQLNLADYFKVNNITYDEMKFGNVSDMLKAYEAG 200 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 +CD T D S LYA + +P +HVIL DIISK PLAP + Q D +W IV W YAM+ Sbjct: 201 KCDVLTTDTSQLYAYRQNLAKPDDHVILADIISKEPLAPVVRQRDDQWMLIVKWAVYAML 260 Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 AEELG+T KNI++ K + PDV R +G + N GE LGLTKDW RIIRH+GNYGE+ Sbjct: 261 NAEELGVTSKNIDEALK-SKKPDVMRLVGTE--GNYGEELGLTKDWAARIIRHVGNYGEV 317 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++RN+G S+L IPRG N LW+ GG+ YAPPIR Sbjct: 318 YERNVGLGSKLGIPRGLNQLWNAGGIQYAPPIR 350 >gi|192291277|ref|YP_001991882.1| extracellular solute-binding protein family 3 [Rhodopseudomonas palustris TIE-1] gi|192285026|gb|ACF01407.1| extracellular solute-binding protein family 3 [Rhodopseudomonas palustris TIE-1] Length = 340 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 140/319 (43%), Positives = 196/319 (61%), Gaps = 7/319 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L IK RG +K G+ G+ +NG W+GF VDF RAL+ +F DP K+Q+ Sbjct: 29 GPTLDRIKSRGVIKVGV-GTTPGYFAPDSNGRWQGFFVDFGRALAVTVFGDPDKVQFTSS 87 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + ++R ALQS + D+L T+ R LG F P ++DGQG ++ K G++S SQL Sbjct: 88 SPQQRLPALQSGEFDVLLSGVTVTITRAFKLGFHFGPTIFYDGQGILVRKDLGVTSASQL 147 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA+I +Q+GTT EL +ADYF+ H K+ P+ E E AA + R D T D S L A Sbjct: 148 DGATIGIQSGTTGELNIADYFRKHRHKFTPVTIEDTSEFIAALDSGRVDGLTQDASDLAA 207 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + +P ++VILP+ +SK PLAPA+ GD W IV+WT A + AEE GIT KN++ Sbjct: 208 KQTQLKKPGDYVILPERLSKEPLAPAVAGGDDRWLEIVTWTVNATIQAEEWGITSKNVDD 267 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 K + +P ++RFLG+D S + E++GL W Y II+ +GNYGE+FDR+L L Sbjct: 268 FLK-SDDPSIRRFLGVDPS--LAESIGLDPKWAYTIIKTVGNYGEIFDRHL---KPLGWE 321 Query: 324 RGYNALWSKGGLMYAPPIR 342 RGYN LW++GGL+Y+PP R Sbjct: 322 RGYNRLWTQGGLLYSPPFR 340 >gi|254424681|ref|ZP_05038399.1| hypothetical protein S7335_4841 [Synechococcus sp. PCC 7335] gi|196192170|gb|EDX87134.1| hypothetical protein S7335_4841 [Synechococcus sp. PCC 7335] Length = 350 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 140/324 (43%), Positives = 209/324 (64%), Gaps = 3/324 (0%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + ++ S L + RG L CG++ G+ GF+ V+A G + G DVD C+A+++A+FDDP ++ Sbjct: 30 AVGSSGSRLQTVLDRGELICGVDGGIPGFSFVEA-GAYSGLDVDVCKAVAAALFDDPEQV 88 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Y L++ ERF AL+ ++D+LSRNT WTL R+ S+G+ F P T++DGQG ++ + GI+ Sbjct: 89 VYRNLDSTERFEALKGGEVDMLSRNTTWTLSRDTSVGMEFGPTTFYDGQGMLVREADGIA 148 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 +S G S+CV+AGTTTEL LAD + + + P F+ + AAY A C+ T D Sbjct: 149 ELSDFEGRSVCVEAGTTTELNLADQMRQLGVSFEPQTFQDADAAYAAYEAGSCEGMTSDK 208 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S L A + T P EHV+L +SK PL P I D+ W++ V W YA++ EELG+T Sbjct: 209 SQLIARRSTLTNPDEHVLLDVTMSKEPLGPLTINNDSAWFDTVKWVTYALIEGEELGLTS 268 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 +NI + T +P ++RF G + +G +GL D+ R I+H+GNYGE+++RNLG S Sbjct: 269 ENIEETVASTEDPTIRRFAGEE--GTLGSDMGLPNDFALRAIKHVGNYGEIYERNLGEGS 326 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 + + RG NALWS+GGL+Y+PP R Sbjct: 327 QFALARGQNALWSEGGLLYSPPFR 350 >gi|296534477|ref|ZP_06896902.1| ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] gi|296265196|gb|EFH11396.1| ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] Length = 449 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 130/327 (39%), Positives = 206/327 (62%), Gaps = 2/327 (0%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 S+ + L ++ RG L CG++TG+ GFA + G W+G DVD CR L++AIF+DP Sbjct: 125 AAAQTSSASPTLEAVRARGQLVCGVHTGIAGFALPDSRGVWQGLDVDLCRGLAAAIFNDP 184 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +K++ +P+++ RF AL S ++D+L R + T+LR+ +LGL +FDG GF++ Sbjct: 185 AKLRLVPVSSSTRFTALGSGELDVLFRTSTQTMLRDTTLGLRHAVTYFFDGHGFMVRADS 244 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 G+ V++L GA+IC+ GTT E ADYF++ N + P+VFER +++ AA +A RCDA+ Sbjct: 245 GVQRVAELRGATICLVQGTTNEQVTADYFRSINTPFQPVVFERTDQVAAALQAGRCDAFG 304 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D S L A + + P++ +LP+ SK P + +GD W++IV W A++ AEE G Sbjct: 305 TDASQLAATRASLPNPAQWSVLPERFSKEPYGAYVRRGDDNWFDIVRWYTTAIIEAEEQG 364 Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 +T N + + NP+ +R LG+ + +G+AL L W Y IR +GNY E++DR++G Sbjct: 365 VTAANAEAMRGSSANPNTRRLLGV--TPELGQALKLDPLWAYNAIRAVGNYAEIYDRHMG 422 Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342 + + +PRG N W++GGL+YA P+R Sbjct: 423 PATPIGLPRGPNEQWTRGGLLYAWPMR 449 >gi|116749482|ref|YP_846169.1| extracellular solute-binding protein [Syntrophobacter fumaroxidans MPOB] gi|116698546|gb|ABK17734.1| extracellular solute-binding protein, family 3 [Syntrophobacter fumaroxidans MPOB] Length = 347 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 125/339 (36%), Positives = 199/339 (58%), Gaps = 3/339 (0%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 ++ ++LF + ++ L IK RG L+CG++ G+ GF+ +G W G DVDFC Sbjct: 11 LVTLLIASVLLFPENVASAGDTLIRIKARGKLRCGVSDGIPGFSWKGPDGRWTGMDVDFC 70 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RAL++A+ DP K+ ++PL A RF AL++ ++D+L+RNT WT+ RE LG+ F + + Sbjct: 71 RALAAAVLKDPEKVDFVPLTASRRFPALKAGELDVLARNTTWTMEREAVLGILFAGVLVY 130 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 D QGF++ GI+ +SQL GA++CV G++ E +A F A N Y P+ E + A Sbjct: 131 DTQGFLVPTSSGITELSQLDGATVCVVRGSSHEEHIAQTFGARNWTYQPLQVESSVQAMA 190 Query: 185 AYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A +C A+T + L ++ P ++ +L + IS+ P+ P + +GD +W+ IV W Sbjct: 191 ALNEGKCKAFTSESPQLKTARMNAPDGPDQYSLLKETISEEPMGPVVRRGDEDWFTIVRW 250 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 + ++ AE+ G T N+ + T + + +D I ++LG+ W R++ + Sbjct: 251 VLFTLILAEDGGYTGANVRSRLEKTADFRAMSWKQLD--GLIAKSLGIDPGWRIRVVESV 308 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F+RNLG+QS L + RG N LW GLMYAPP R Sbjct: 309 GNYGEVFERNLGSQSTLNLERGPNKLWKDAGLMYAPPFR 347 >gi|261823404|ref|YP_003261510.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] gi|261607417|gb|ACX89903.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] Length = 350 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 137/326 (42%), Positives = 204/326 (62%), Gaps = 4/326 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + + N L IK RG L CG++ GF+ + + G W G DVD+CRAL++AIF D SK Sbjct: 28 AADAGNGETLKKIKARGELVCGVHPARHGFSAIDSKGQWTGLDVDYCRALAAAIFGDASK 87 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +++ L+ +RF A+QS ++D+LSRN L R+ SLGL F P T++ G GF++ + Sbjct: 88 VRFAALSTAQRFPAIQSGEVDVLSRNITADLSRDTSLGLNFAPPTFYTGTGFMVRTSANV 147 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +V L GA++C+ G++TE +A F + N+ Y P+V E +E AAY + RCD D Sbjct: 148 KTVEDLDGATVCITPGSSTERNVAQIFASRNLHYTPVVIENNKEYVAAYLSGRCDVIARD 207 Query: 198 ISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 AL ++ ++P++HVILP I SK PLA A+ QGD +WY+IV W YA AEE+ I Sbjct: 208 KVALPGVRTFDAEKPADHVILPGIYSKEPLAMAVRQGDDQWYDIVKWVVYATFNAEEMEI 267 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 Q+N++ K +T+PDVQ LG + + G+ LGL W Y +I+ +GNYG++++R+ G Sbjct: 268 GQQNVDSKLK-STDPDVQALLGT--TGDYGQKLGLNNQWAYNLIKQVGNYGDIYNRHFGP 324 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 + + R N LW+KGGL+Y PIR Sbjct: 325 DTPAPLERDLNNLWTKGGLLYGLPIR 350 >gi|126731767|ref|ZP_01747571.1| Lysine-arginine-ornithine-binding periplasmic protein [Sagittula stellata E-37] gi|126707594|gb|EBA06656.1| Lysine-arginine-ornithine-binding periplasmic protein [Sagittula stellata E-37] Length = 344 Score = 318 bits (814), Expect = 9e-85, Method: Composition-based stats. Identities = 140/347 (40%), Positives = 210/347 (60%), Gaps = 8/347 (2%) Query: 1 MYKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K F ++I + + L IK RG L CG++ GFA + G+W Sbjct: 1 MTKIFKSLSTGMLIGAAALATAAQAESGDTLASIKSRGELLCGVHPARHGFAAPDSQGNW 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G +VD+C AL++A+F D K++++ L++++RF A+QS ++D+L RN TL R+ +LGL Sbjct: 61 AGLEVDYCHALAAAVFGDADKVRFVALSSQQRFPAIQSGEVDVLVRNVTATLGRDTALGL 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F P ++ G GF++H G+ +V L GA+ICV G+TTE +A F + M+Y P+V Sbjct: 121 NFAPPIFYTGTGFLVHAGSGVETVEDLDGATICVAPGSTTERNVAQIFASRGMEYTPVVI 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E +++ AY RCDA T D +AL ++ P EHV+LP I SK PLAPA+ QGD Sbjct: 181 ENNKQLVDAYVTGRCDALTKDKAALPGVRAYDTTDPKEHVLLPGIFSKEPLAPAVRQGDD 240 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295 +WY+IV W YA AEELG+T +N ++ ++ + DV LG + + G LGLT+DW Sbjct: 241 QWYDIVKWVVYATFNAEELGVTSENAEEMR-NSDDVDVMSLLGT--TGDYGSKLGLTEDW 297 Query: 296 TYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 Y +I +GNYGE++DR+ G S +++ R N W+ GGL+Y PI+ Sbjct: 298 AYDVITQVGNYGEIYDRHFGPDSPVQLDRDLNKQWTDGGLLYGFPIK 344 >gi|160899043|ref|YP_001564625.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160364627|gb|ABX36240.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 345 Score = 318 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 153/319 (47%), Positives = 220/319 (68%), Gaps = 3/319 (0%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L IK+RG + CG++TG GFA +G+W G DVD CRA+++A D SK++++P Sbjct: 28 GKTLDGIKQRGAVACGVHTGRAGFALADGSGNWSGLDVDLCRAVAAATLGDASKVKFIPT 87 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + + R ALQS +ID+L+RNT WT R+ LGL + I + DGQGF+ KK G++SV QL Sbjct: 88 SGQTRITALQSGEIDLLARNTTWTFTRDNGLGLMWAGINFHDGQGFMARKKPGLNSVKQL 147 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 SGA+ICV +G+TTE TL++YF+AH + Y +VF+ E A+ + RC AYTGD+ AL Sbjct: 148 SGATICVISGSTTEKTLSEYFRAHKLNYKAVVFDNPEAALQAFSSGRCQAYTGDLGALAV 207 Query: 204 LKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 L+ P ++VILP++ISK P PA+ +GD EW+ +V WT AM+ AEELGITQ N + Sbjct: 208 LRGKELANPDDYVILPEVISKEPAGPAVRRGDDEWFAVVRWTLNAMIEAEELGITQANAD 267 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 ++ + + V+RFLG ++G+ LGL K+W RI++ +GNYGE ++RNLG +S L + Sbjct: 268 ELKTRSDSIQVKRFLGQSD--DLGKQLGLDKEWALRIVKAVGNYGESYERNLGAKSGLNV 325 Query: 323 PRGYNALWSKGGLMYAPPI 341 PRG NAL++KGGLM +PP+ Sbjct: 326 PRGKNALFTKGGLMMSPPM 344 >gi|254466846|ref|ZP_05080257.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Rhodobacterales bacterium Y4I] gi|206687754|gb|EDZ48236.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Rhodobacterales bacterium Y4I] Length = 337 Score = 318 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 139/336 (41%), Positives = 211/336 (62%), Gaps = 4/336 (1%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + + + S +A L D++ G L CG++ G+ GF+ + G W G D D CRA Sbjct: 6 TLAILATAVATMAASAHAGKLEDVRAAGELACGVSEGVPGFSNPNSEGVWTGLDADICRA 65 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 +++A D + ++++PL +K++ LA+ S Q+D+ SR T WT+ R+ + G+ F + Y+DG Sbjct: 66 VAAATLGDANAVRFVPLASKQKVLAVSSGQVDMTSRTTTWTMKRDSAEGVDFTSVVYYDG 125 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 QGF++ G++S +L A++C+ GTTTEL +AD+ +A+ + P+VFE E AY Sbjct: 126 QGFMVRADAGVTSAKELDAATVCLTTGTTTELNMADFARANGLTLEPVVFEGKREAVEAY 185 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + RCDA T D S L A + PS+H ILP+IISK PLAP + GD +W ++V+W Y Sbjct: 186 ASGRCDALTTDASQLAAFRAGFANPSDHKILPEIISKEPLAPFVAHGDNQWKDVVTWVVY 245 Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306 ++TAEELG+TQ N+ ++ + NPDVQR LG S + G LGL+ W I +GNY Sbjct: 246 GLITAEELGVTQANVADMAASSANPDVQRLLGA--SGDTGGLLGLSNTWMADAISAIGNY 303 Query: 307 GEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GE+++RNL + L + RG NALWS GG++YA P+R Sbjct: 304 GEIYERNL--TATLGLERGVNALWSDGGILYAMPVR 337 >gi|269102822|ref|ZP_06155519.1| amino acid ABC transporter amino acid-binding protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268162720|gb|EEZ41216.1| amino acid ABC transporter amino acid-binding protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 342 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 146/333 (43%), Positives = 220/333 (66%), Gaps = 3/333 (0%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L L+ L F+ S +S L +KKRG++KCG++TGL+GF+E G W GFDV+FCRA+++ Sbjct: 13 LVLVALLFSYASVASSTLETVKKRGYIKCGVSTGLLGFSEPNQKGIWHGFDVEFCRAVAA 72 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 A+ D +++++PL AKERF ALQ+ +D+L+RNT WTL R+ SL + F ++Y+DGQGF Sbjct: 73 AVLKDKGQVKFIPLTAKERFFALQNNDVDLLARNTSWTLHRDTSLNVLFTGVSYYDGQGF 132 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ I+ +++LS IC Q GTTTEL L++YF + I F+ ++ A+ Sbjct: 133 LVKTSANINKITELSNPRICFQTGTTTELNLSEYFAQIKQPFQSIPFDAKPQLVTAFEDD 192 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 RCD + D + LY++K + P IL +ISK PL P + D++W+NIV WT + ++ Sbjct: 193 RCDVISSDKAGLYSIKQSLKDPLSAHILVSVISKEPLGPVVRDNDSQWFNIVKWTLFTLL 252 Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 AEE I+ +NI+ + KD++ P + RFL N+ E L L DW Y+II+ +GNYG++ Sbjct: 253 NAEENRISSENIDDL-KDSSIPHIARFLSTKD--NLSEGLQLPLDWRYQIIKQVGNYGQI 309 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++R LG+ S+LK+ RG NALW GG+ YAPPIR Sbjct: 310 YERTLGHSSKLKMERGLNALWIDGGIQYAPPIR 342 >gi|296537351|ref|ZP_06899216.1| ABC superfamily ATP binding cassette transporter, amino acid binding protein [Roseomonas cervicalis ATCC 49957] gi|296262324|gb|EFH09084.1| ABC superfamily ATP binding cassette transporter, amino acid binding protein [Roseomonas cervicalis ATCC 49957] Length = 344 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 152/318 (47%), Positives = 219/318 (68%), Gaps = 6/318 (1%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 +G I+ RG L CG+ GF+ + G +G D D CRA+++AIF D SK++++ Sbjct: 33 DTVGAIRARGALICGVTGTTAGFSLPDSQGVMRGIDADTCRAVAAAIFGDASKVRFVNTT 92 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 ++ RF ALQS ++D+L+RNT WTL RE SLG F I ++DGQGF++ ++S L Sbjct: 93 SQNRFTALQSGEVDMLARNTTWTLSREASLGFEFASINFYDGQGFMVKTSLNVTSAKALD 152 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 GA+ICVQ GTTTEL LADYF+ + M++ P+V E VEEI A+ + RCDAYT D S+L A Sbjct: 153 GATICVQPGTTTELNLADYFRTNRMRFTPVVIESVEEIRTAFNSGRCDAYTNDASSLAAF 212 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + T P+E+++LP+IISK PL + +GD ++++IV W H+A VTAEELGIT +N+ Sbjct: 213 RATQANPAEYLLLPEIISKEPLGAVVRKGDWKFFDIVRWAHFAQVTAEELGITSQNLASF 272 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 D+ NPDVQRF+G KS ++G LG+ DW +I+R +GN+GE+++RN+ + L + R Sbjct: 273 -ADSPNPDVQRFMG--KSGDLGRMLGVQADWAVQIVRQVGNFGEVWERNI---TPLGVQR 326 Query: 325 GYNALWSKGGLMYAPPIR 342 G N LW++GGL YAPP+R Sbjct: 327 GINRLWTQGGLQYAPPMR 344 >gi|296535903|ref|ZP_06898057.1| amino-acid ABC superfamily ATP binding cassette transporter, substrate-binding protein [Roseomonas cervicalis ATCC 49957] gi|296263760|gb|EFH10231.1| amino-acid ABC superfamily ATP binding cassette transporter, substrate-binding protein [Roseomonas cervicalis ATCC 49957] Length = 325 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 144/317 (45%), Positives = 212/317 (66%), Gaps = 4/317 (1%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L ++ + L C N G GF + G+ +G D D CRA+++A+ ++I++ L + Sbjct: 13 TLAAVRAKALLDCSANQGSPGFGVPDSRGEQQGLDPDICRAVAAAVLGPNARIRWTVLTS 72 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 R ALQS Q+DI++R WT RE++ GL F ++DGQGFI+ K G++ +QL G Sbjct: 73 ATRVTALQSGQVDIVARTFTWTHAREVNAGLQFASPVFYDGQGFIVPKASGVTRAAQLDG 132 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ASICV AG+T EL LAD+ +++ ++ +P+VFE E+ AY + RCDAYT D S L Sbjct: 133 ASICVTAGSTNELNLADWARSNGLRVNPVVFEGNEDTRKAYTSGRCDAYTLDASQLAGFA 192 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 T R EHVIL DIISK PL+PA+ +GD +WY+IV WT +A++ AEE GITQ N++ + Sbjct: 193 TTLPRG-EHVILSDIISKEPLSPAVRKGDAQWYDIVRWTIFALILAEEHGITQANVDSML 251 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 + + NP+V+R LG+ + + G A+GL + W Y I+ +GNYGE+F+R+LG +S L + RG Sbjct: 252 E-SQNPEVRRLLGV--AGDHGPAMGLDRRWAYNAIKAVGNYGEIFERHLGAESPLGLERG 308 Query: 326 YNALWSKGGLMYAPPIR 342 NALW++GGL+YAPP+R Sbjct: 309 LNALWNRGGLLYAPPMR 325 >gi|317405314|gb|EFV85638.1| amino acid-binding periplasmic protein [Achromobacter xylosoxidans C54] Length = 341 Score = 315 bits (807), Expect = 6e-84, Method: Composition-based stats. Identities = 140/321 (43%), Positives = 202/321 (62%), Gaps = 4/321 (1%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + IKKRG L CG++ G G + G W G D D CRAL++A+ DP K +++P Sbjct: 24 AGVTVDAIKKRGELVCGVSQGSAGLSIADKQGRWTGLDADLCRALAAAVLGDPEKTRFVP 83 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L++++RF ALQ +ID+L+RNT T R+ LG+ I ++DGQGF++ KK G+ S ++ Sbjct: 84 LSSQQRFPALQGGEIDVLNRNTTITSSRDAGLGIVSAGIVFYDGQGFLVPKKLGVKSATE 143 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-AL 201 L GA +CVQ GT E L DYFK H + Y P+V E + E++ A+ A RCD Y D S Sbjct: 144 LDGAQVCVQPGTVNEQNLVDYFKKHKLNYRPVVIENLVELEQAFYAGRCDVYLSDASTLA 203 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + P + VILP+ I+KSPL P + Q D W IV WT A+V AEELGIT +N+ Sbjct: 204 ASRAARAANPDDFVILPERINKSPLGPFVRQDDPNWTAIVRWTVNALVAAEELGITSRNV 263 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 + ++ +++ V+R LG+D IG+ GL + W +IR +GNYGE++DRNLG + LK Sbjct: 264 DSQAQ-SSDAQVRRLLGLDP--GIGKGFGLDEGWARNVIRAVGNYGEVWDRNLGAATPLK 320 Query: 322 IPRGYNALWSKGGLMYAPPIR 342 + RG N W++GGL+Y+PP + Sbjct: 321 LDRGLNRQWNQGGLLYSPPFQ 341 >gi|33592620|ref|NP_880264.1| putative extracellular solute-binding protein [Bordetella pertussis Tohama I] gi|33595874|ref|NP_883517.1| putative extracellular solute-binding protein [Bordetella parapertussis 12822] gi|33600404|ref|NP_887964.1| putative extracellular solute-binding protein [Bordetella bronchiseptica RB50] gi|33565953|emb|CAE36503.1| putative extracellular solute-binding protein [Bordetella parapertussis] gi|33568003|emb|CAE31916.1| putative extracellular solute-binding protein [Bordetella bronchiseptica RB50] gi|33572266|emb|CAE41818.1| putative extracellular solute-binding protein [Bordetella pertussis Tohama I] Length = 340 Score = 315 bits (807), Expect = 7e-84, Method: Composition-based stats. Identities = 143/343 (41%), Positives = 219/343 (63%), Gaps = 4/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ L + + L +KK+GF++CG+ G+ GF+ + G+W+G D Sbjct: 1 MKRHIAMAAGALALALGAQAAHAGPTLDAVKKKGFVQCGLTDGVAGFSATNSKGEWEGMD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A+F D K + L+ ++RF ALQS ++D+L R T R+ SLGLA Sbjct: 61 VDICRAVAAAVFGDAGKFKGTALSTQQRFTALQSGEVDVLLRTVTLTQTRDTSLGLAAVA 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +++DGQG ++ K G+ S +L A+ICVQ GTTTEL LAD+F+A+ +K+ P+V ++V Sbjct: 121 ASFYDGQGVLVRKALGVKSAKELDEATICVQPGTTTELNLADWFRANGIKFTPVVIDKVT 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ A+ + RCDA+T D S L A++ +P + ILP+ SK PL P + QGD W Sbjct: 181 EVVRAFESGRCDAFTDDASQLAAVRATQVAKPDDFEILPERFSKEPLGPMVRQGDENWLG 240 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 IV WT +A++ AEE GITQ+N++++ K + NP+V R LG+ + G+ +GL + W Y Sbjct: 241 IVRWTLFALMEAEEYGITQQNVDEMLK-SKNPNVLRILGV--TPGAGKNMGLDEKWAYNA 297 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+ +GNY ++F+RN+G S L + RG NALWS+GG MY PIR Sbjct: 298 IKAVGNYSQIFERNVGKDSRLGLQRGVNALWSQGGAMYPWPIR 340 >gi|83595863|gb|ABC25225.1| glutamate/glutamine/aspartate/asparagine-binding protein bztA precursor [uncultured marine bacterium Ant4D3] Length = 340 Score = 314 bits (805), Expect = 9e-84, Method: Composition-based stats. Identities = 144/316 (45%), Positives = 204/316 (64%), Gaps = 3/316 (0%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 D++ G LKC + TGL GFA ANG W+GFD DFCRA+++A+ D K++++P K Sbjct: 27 EDVRAAGELKCVVTTGLAGFAAPDANGRWEGFDADFCRAVAAAVLGDGDKVKFVPSTGKT 86 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 RF L S + DIL RNT TL R++ L L+F P+ ++DGQGF++ G++S L GAS Sbjct: 87 RFTMLNSGEGDILFRNTTETLSRDVDLKLSFLPVNFYDGQGFMVPAALGVTSAMDLDGAS 146 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C+Q GTTTEL LADYF+A+ M Y P+ E EE Y A RCD YT D S L + + Sbjct: 147 VCIQTGTTTELNLADYFRANGMSYEPVPIETNEEGFTNYVAGRCDVYTTDASGLASTRAK 206 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 D P++HV+LP+IISK PL A+ GD +W++I W A++ AEE+G+TQ N ++ + Sbjct: 207 FDDPTQHVVLPEIISKEPLGGAVRHGDDQWHDIGKWVVNALINAEEMGVTQANAMNLAAN 266 Query: 268 -TTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 NP + R +G + ++G LGL W R + GNYGE+++RN+G + L+I RG Sbjct: 267 VGKNPGINRLVGSE--GSMGAMLGLDAKWAARAVAQGGNYGEIYERNVGPNTPLEIARGL 324 Query: 327 NALWSKGGLMYAPPIR 342 N LW+ GG++YA PIR Sbjct: 325 NNLWNNGGVLYAAPIR 340 >gi|148655565|ref|YP_001275770.1| extracellular solute-binding protein [Roseiflexus sp. RS-1] gi|148567675|gb|ABQ89820.1| extracellular solute-binding protein, family 3 [Roseiflexus sp. RS-1] Length = 415 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 132/323 (40%), Positives = 200/323 (61%), Gaps = 10/323 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN- 84 L +K+RG+L CG N L GF + W GFDVDFCRA+++AIF D +K++++ L Sbjct: 96 LARVKERGYLICGTNADLPGFGFYDSVRQTWSGFDVDFCRAVAAAIFGDATKVEFVALGT 155 Query: 85 ---AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 RF A++ ++D+L RNT WTL R GLAF P T+ DGQ F++ K I+ + Sbjct: 156 GPGPNNRFDAVREGRVDVLFRNTTWTLGRN-ISGLAFGPTTFHDGQTFMVRAKDRITKLE 214 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G ICV GTT+E L D F A +++ V + +E+ AY CDA T D S L Sbjct: 215 DLEGKVICVAKGTTSEQNLNDDFAARGIRFTARVLDGEDELYPAYDEGECDAVTSDSSQL 274 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 A + P++H+IL D IS+ PL P I + D +W +++SWT +A + AEEL + Q+N+ Sbjct: 275 AAKRQQLKNPADHIILGDRISREPLGPVIARDDNQWLDVISWTVFATIYAEELRVDQRNV 334 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 +++ TT+P ++R LG++ N GE LGL D+ Y+II+ +GNYG++++RNLG + + Sbjct: 335 DRLRTSTTDPRIKRLLGLE--GNFGEGLGLPNDFAYQIIKQVGNYGDIYNRNLGPNTVIN 392 Query: 322 IPRGYNALWS--KGGLMYAPPIR 342 + RG N +W+ GG++ +PP R Sbjct: 393 LDRGPNKVWNLGAGGVLASPPFR 415 >gi|113953701|ref|YP_730400.1| polar amino acid ABC transporter periplasmic amino acid-binding protein [Synechococcus sp. CC9311] gi|113881052|gb|ABI46010.1| polar amino amino acid ABC transporter (PAAT) family, periplasmic amino acid-binding protein [Synechococcus sp. CC9311] Length = 381 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 135/352 (38%), Positives = 211/352 (59%), Gaps = 12/352 (3%) Query: 1 MYKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M L + +T AS L IK+R L+CG++ + GF+ ++ +G + Sbjct: 32 MRVHLLALPLVSFLFILNGCATLGEGGASRLDLIKRRAELRCGVSGKIPGFSFLRRDGSF 91 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--L 114 G DVD CRA ++A+ P ++QY L A ERF AL++ +ID+LSRNT + L R+ Sbjct: 92 AGLDVDICRAFAAALTGSPDQVQYRSLTAPERFTALRTGEIDLLSRNTTFNLSRDAVGGN 151 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 G++F P+ + DGQG ++ ++ G+S ++ L G +ICV +GTTTE L D F+A + Y PI Sbjct: 152 GVSFAPVVFHDGQGLLVKRQSGVSDLNDLQGKTICVGSGTTTEQNLNDAFQARGIDYKPI 211 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 ++ + ++ A Y RC A T D S L A + + P +HVILP+++SK PLAP GD Sbjct: 212 KYQDLNQVIAGYLQGRCSAMTSDRSQLAAARSGFNNPEQHVILPEVLSKEPLAPLAAGGD 271 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNI----NQVSKDTTNPDVQRFLGIDKSSNIGEALG 290 + + W YA++ AEELGITQ+NI + + ++RFLG++ +GE LG Sbjct: 272 QRLADAMRWVIYALIAAEELGITQQNIGDKLEEAQRRPELTQLRRFLGVE--GELGEKLG 329 Query: 291 LTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 L D+ ++I+ +GNYGE+++R+LG S + IPRG N L+ GG++ +PP + Sbjct: 330 LNNDFIVKVIQAVGNYGEIYNRHLGPDSAVPIPRGLNNLYRNGGVLTSPPFQ 381 >gi|295689853|ref|YP_003593546.1| extracellular solute-binding protein family 3 [Caulobacter segnis ATCC 21756] gi|295431756|gb|ADG10928.1| extracellular solute-binding protein family 3 [Caulobacter segnis ATCC 21756] Length = 376 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 143/319 (44%), Positives = 207/319 (64%), Gaps = 6/319 (1%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L ++ RG+L CG+ GL+GFA G W+GFD DFCRA ++AIF ++ P ++ Sbjct: 62 TLAAVRARGYLVCGVQQGLIGFAYADNTGRWRGFDTDFCRATAAAIFGRAEAARFTPTSS 121 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ER LQ+ ++D+L RNT T R+ F + Y+DGQ F++ K G++ +QL+G Sbjct: 122 TERLTVLQAGEVDVLWRNTSATFSRDA--KFDFSGVNYYDGQAFLVRKALGVAHAAQLNG 179 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 A IC+Q G+T+E+ L DYF+AH + Y P+VF+ ++ AAY +CD YT D+S L A + Sbjct: 180 ARICIQTGSTSEMNLTDYFRAHKLTYEPVVFDTEDKARAAYGREQCDVYTADLSNLAAAR 239 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 T RP +H+ILP++ISK PL P + QGD W N+V WT AM+ AEELG+T N+ + Sbjct: 240 ATLARPGDHLILPEVISKEPLGPVVRQGDDAWGNVVRWTLNAMILAEELGVTSANVEALR 299 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 + NP+++R LG + G +GL+ D+ ++IIR +GNYGE+F RNLG + LKI RG Sbjct: 300 ARSDNPEIRRLLGAEP--GYGAMIGLSDDFAFQIIRQVGNYGEVFARNLGPATPLKIERG 357 Query: 326 YNALWSKG--GLMYAPPIR 342 NALW+ GL+YAPP+R Sbjct: 358 LNALWNASPPGLLYAPPMR 376 >gi|87302592|ref|ZP_01085409.1| polar amino acid transport system substrate-binding proetin [Synechococcus sp. WH 5701] gi|87282936|gb|EAQ74893.1| polar amino acid transport system substrate-binding proetin [Synechococcus sp. WH 5701] Length = 405 Score = 312 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 135/333 (40%), Positives = 206/333 (61%), Gaps = 8/333 (2%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + + L I+ R L CG++ L GF+ + +G + G D D CRA+++A+ DP Sbjct: 75 SGSGGGVQSVKLSTIRGRDKLVCGVDGKLPGFSFLGPDGTYSGLDADTCRAVAAAVLGDP 134 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLAFRPITYFDGQGFIMHK 133 SK++Y LN+ ERF AL S ++D+L+RNT TL R+ + G++F P T++DGQG ++ Sbjct: 135 SKVEYRDLNSSERFAALASGEVDMLARNTTMTLSRDSAGGNGISFGPTTFYDGQGVMVPV 194 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 G ++ L G ICV++GTTTEL LAD + + Y P+ F+ ++ AAY RC A Sbjct: 195 ASGARTLKDLDGKPICVESGTTTELNLADRMREQGIAYTPLKFQTGDQTYAAYLGGRCVA 254 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 T D S L A + + +P EH++LP+++SK PL PA + GD W + + WT +A+ AEE Sbjct: 255 VTSDRSQLAAKRSSFPKPDEHILLPEVMSKEPLTPASVNGDPAWADALRWTVFALFQAEE 314 Query: 254 LGITQKNINQVSK----DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 LGIT+ N+ +T D++RFLG++ + G+ LGL D+ + I +GNYGE+ Sbjct: 315 LGITKANVAAKVAEAKANTNQADLRRFLGVE--GDFGKQLGLPADFVAKTIAAVGNYGEI 372 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 F+RN+G S LK+ R N LW++GGL+Y+PP R Sbjct: 373 FERNVGTGSPLKLERAENRLWTQGGLIYSPPFR 405 >gi|326204744|ref|ZP_08194599.1| extracellular solute-binding protein family 3 [Clostridium papyrosolvens DSM 2782] gi|325985115|gb|EGD45956.1| extracellular solute-binding protein family 3 [Clostridium papyrosolvens DSM 2782] Length = 363 Score = 312 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 137/365 (37%), Positives = 208/365 (56%), Gaps = 27/365 (7%) Query: 1 MYKDF-------FVSILCLIILFFTSFSTN-----------------ASILGDIKKRGFL 36 M K F +L +L T S++ SIL +K RG + Sbjct: 1 MRKIFNAKALGKVAMLLVASVLVVTGCSSSNEQSDTSGKSGTKGQGSESILQKVKARGKV 60 Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 G +T L GF ++ +G + GFD++ +A ++AI DP+ + P+ + RF ALQ+ + Sbjct: 61 YIGCDTVLPGFGFLETDGKYSGFDIEIGKAFAAAILGDPNAAEMKPVTGQTRFTALQTGE 120 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 IDILSR T ++ R+ +LG+ F P ++DGQG ++ K K + + L G I V+ GTTT Sbjct: 121 IDILSRATTMSITRDTTLGIRFLPTDFYDGQGIMVKKNKNVKTFKDLDGMRIGVEQGTTT 180 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 E + A K + +VFE + I +AY A DA+T D S L + + EH I Sbjct: 181 EKNVTTKLAAVGAKANIVVFENQDSIVSAYEAGSIDAWTSDKSGLVSRLAGMSKQDEHAI 240 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 L + +SK PL PAI GD +W+N+ WT YA++ AEELGITQ N+ ++ K + +P ++ Sbjct: 241 LEETLSKEPLTPAIKAGDDQWFNVTRWTLYALMQAEELGITQANVEEMVK-SDDPSIRSL 299 Query: 277 LGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLM 336 LG + ++G+ LGL+ DW ++I+ +GNYGE+++R LG S K+ RG NALW+ GGLM Sbjct: 300 LGAE--GDLGKNLGLSNDWVVKLIKGVGNYGEIYERTLGQGSAFKLDRGLNALWTDGGLM 357 Query: 337 YAPPI 341 Y+PP Sbjct: 358 YSPPF 362 >gi|27378020|ref|NP_769549.1| amino acid binding protein [Bradyrhizobium japonicum USDA 110] gi|27351166|dbj|BAC48174.1| bll2909 [Bradyrhizobium japonicum USDA 110] Length = 337 Score = 312 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 145/318 (45%), Positives = 208/318 (65%), Gaps = 4/318 (1%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +K RG L CG++ G GF+ + G++KG DVD+CRAL++ + D SK++Y+ L A Sbjct: 23 TLDTVKSRGTLVCGVSAGFAGFSAPDSQGNYKGLDVDYCRALAAGVLGDASKVRYVSLTA 82 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + RF ALQS +ID+L RN+ T LR ++LGL PI ++DGQGF++ K G+ + L G Sbjct: 83 QNRFTALQSGEIDVLYRNSTQTYLRGVTLGLRQGPINFYDGQGFVVKKDLGVKDIKDLKG 142 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 A++CV GTT E+TL DY +A+ + + P+VF+RV+ + + RCDA T D SAL Sbjct: 143 ATVCVAQGTTHEVTLGDYGRANGIDWKPLVFDRVDTMYQTFFGGRCDAMTQDASALAGAV 202 Query: 206 LT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 T P+++V+LP ISK PL P GD W +I++W HY ++ AEELG+TQ N++++ Sbjct: 203 TTAAPNPADYVVLPQTISKEPLGPFTRNGDEVWSDIITWLHYGLIEAEELGVTQANVDEM 262 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 +K T P +QR LG S ++G LGL W I+ GNYGE+++RN+G S LK+ R Sbjct: 263 AKSQT-PAIQRLLGA--SGDLGSRLGLDNKWLVTAIKATGNYGEIYERNVGKASPLKLDR 319 Query: 325 GYNALWSKGGLMYAPPIR 342 G N LWSKGGLMYA P + Sbjct: 320 GLNGLWSKGGLMYAVPFK 337 >gi|156741676|ref|YP_001431805.1| extracellular solute-binding protein [Roseiflexus castenholzii DSM 13941] gi|156233004|gb|ABU57787.1| extracellular solute-binding protein family 3 [Roseiflexus castenholzii DSM 13941] Length = 411 Score = 312 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 131/323 (40%), Positives = 199/323 (61%), Gaps = 10/323 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN- 84 L +K+RG+L CG N L GF W GFDVDFCRA+++AIF D +K++++ L Sbjct: 92 LARVKERGYLICGTNADLPGFGFYDNVRQAWSGFDVDFCRAVAAAIFGDATKVEFVALGT 151 Query: 85 ---AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 RF A++ ++D+L RNT WTL R GLAF P T+ DGQ F++ + I+ + Sbjct: 152 GPGPNNRFDAVREGRVDVLFRNTTWTLGRN-ISGLAFGPTTFHDGQTFMVRIRDRITKLE 210 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G ICV GTT+E L D F A +++ V +E+ AY CDA T D S L Sbjct: 211 DLAGKVICVAKGTTSEQNLNDDFAARGIQFTARVLNGEDELYPAYDEGECDAVTSDSSQL 270 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 A + P++H+IL D IS+ PL P I + D +W +++SWT +A + AEEL + Q+N+ Sbjct: 271 AAKRQQLKNPADHIILGDRISREPLGPVIARDDNQWLDVISWTVFATIYAEELRVDQRNV 330 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 +++ TT+P ++R LG++ N GE LGL D+ Y+II+ +GNYG++++RNLG + + Sbjct: 331 DRLRASTTDPRIKRLLGLE--GNFGEGLGLPNDFAYQIIKQVGNYGDIYNRNLGPNTVIN 388 Query: 322 IPRGYNALWS--KGGLMYAPPIR 342 + RG N +W+ GG++ +PP R Sbjct: 389 LDRGPNKVWNLGAGGVLASPPFR 411 >gi|3182934|sp|Q52663|BZTA_RHOCA RecName: Full=Glutamate/glutamine/aspartate/asparagine-binding protein BztA; Flags: Precursor gi|1655712|gb|AAB17886.1| BztA [Rhodobacter capsulatus SB 1003] Length = 338 Score = 311 bits (797), Expect = 9e-83, Method: Composition-based stats. Identities = 154/342 (45%), Positives = 221/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + + + + +AS L D+K RG L CG N GL GFA ANG ++GFD Sbjct: 1 MKKSVFFG--SVALAALVAGAASASTLDDVKARGQLICGSNPGLTGFAAPDANGVYQGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V C+A+++A+ DP K++Y+PL + RF AL S ++D+L RN+ WT R+ L L F Sbjct: 59 VAVCKAVAAAVLGDPMKVKYVPLTGETRFTALASGEVDVLVRNSTWTFSRDTELALDFVA 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF+++K G+SS +L GA+ICVQ GTTTE+ LAD+FKA+NM Y P+ Sbjct: 119 VNYYDGQGFMVNKSLGVSSAKELDGATICVQTGTTTEMNLADFFKANNMTYTPVNIADDA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + A CD+YT D S L + + T ++ VILP+IISK PL P + GD W +I Sbjct: 179 EGQQKFAAGACDSYTTDASGLASSRATLPNAADIVILPEIISKEPLGPVVRHGDNNWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ YA+V AEE GIT+ N+ +V+ T NP+++R LG++ ++G+ +GL D+ R I Sbjct: 239 VRWSFYALVAAEEYGITKANLEEVAASTQNPEIRRLLGLE--GDMGKKIGLDNDFAKRAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F+ N+G + + + RG NA W++GGLMYAPP R Sbjct: 297 LASGNYGEVFEANIGASTSIGLARGLNAQWTQGGLMYAPPFR 338 >gi|331005342|ref|ZP_08328727.1| amino acid ABC transporter, periplasmic amino acid-binding protein [gamma proteobacterium IMCC1989] gi|330420839|gb|EGG95120.1| amino acid ABC transporter, periplasmic amino acid-binding protein [gamma proteobacterium IMCC1989] Length = 336 Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats. Identities = 145/341 (42%), Positives = 216/341 (63%), Gaps = 6/341 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + +LF + A L D+++RGF+ CG++ GL GF++ G W G D Sbjct: 1 MK---LLKTIIVGVLFLAALGVKAGTLEDVRERGFVSCGVSDGLTGFSQKNDKGVWSGLD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A+F D K+ Y PL AKERF+ALQS ++D+LSRNT WTL R++++GL F Sbjct: 58 VDVCRAVAAAVFSDADKVAYKPLTAKERFVALQSNEVDLLSRNTTWTLTRDVAMGLKFAG 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y+DGQGF++ ++ G+SS +L GAS CVQAG+T+E+ + +F +NM Y +F++ Sbjct: 118 INYYDGQGFLVSQELGVSSAFELDGASFCVQAGSTSEVGIEIFFNNNNMTYKRRIFDKSS 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ CD + D S LY+ + P V+LP++ISK PL P + QGD W+NI Sbjct: 178 DVRDGLDKGMCDVISSDQSQLYSFRTGLMNPESFVVLPEVISKEPLGPVVRQGDDTWFNI 237 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ AM+ AE LGIT N++ + K +R LG + + L+ DW Y II Sbjct: 238 VRWSLVAMIEAEFLGITSLNVDILRKSGELGQ-KRLLGSE--GELSTNSSLSADWAYNII 294 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 + +GNY E F+RN+G++S LKI RG NA W+ GG++Y+PPI Sbjct: 295 KQVGNYSESFERNVGSESTLKIARGLNAQWNAGGILYSPPI 335 >gi|254432874|ref|ZP_05046577.1| polar amino acid transport system substrate-binding proetin [Cyanobium sp. PCC 7001] gi|197627327|gb|EDY39886.1| polar amino acid transport system substrate-binding proetin [Cyanobium sp. PCC 7001] Length = 344 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 143/346 (41%), Positives = 213/346 (61%), Gaps = 12/346 (3%) Query: 7 VSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 +++L LI L + ++ L I R L CG+ L GF+ V+ +G + G DVD Sbjct: 1 MALLGLIPLAACAPPDGSGLQSAKLNGITARDKLVCGVEGTLPGFSFVEPDGRYSGLDVD 60 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI--SLGLAFRP 120 C+A+++A+ DP K++Y LN+ ERF AL S ++D+L+RNT TL R+ GL+F P Sbjct: 61 TCKAVAAAVLGDPDKVEYRNLNSSERFAALASGEVDMLARNTTATLSRDAAGGNGLSFAP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 T++DGQG + K GI+ + LSG +ICV++GTTTEL LAD + ++ Y P+ F+ + Sbjct: 121 TTFYDGQGVMAPVKSGITDLKGLSGKAICVESGTTTELNLADRMREIDVPYTPLKFQTSD 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + AAY RC A T D S L + + P +H +LPD++SK PL+PA D W + Sbjct: 181 QTYAAYLGGRCAAVTSDRSQLAGKRSSFPAPDDHQLLPDVLSKEPLSPATTNADPAWADA 240 Query: 241 VSWTHYAMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296 + W ++++ AEE GITQ N++ + +T D++RF G++ + G LGL D+T Sbjct: 241 LRWIVFSLMQAEEWGITQANLDSKLAEAQANTNLADLRRFFGVE--GDFGRQLGLPADFT 298 Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 R IR +GNYGE+F+RN+G S LK+ RG N LWS+GGL+YA P R Sbjct: 299 VRAIRAVGNYGEIFERNVGTTSRLKLERGLNRLWSEGGLIYAQPFR 344 >gi|78213330|ref|YP_382109.1| extracellular solute-binding protein [Synechococcus sp. CC9605] gi|78197789|gb|ABB35554.1| extracellular solute-binding protein, family 3 [Synechococcus sp. CC9605] Length = 353 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 143/354 (40%), Positives = 207/354 (58%), Gaps = 15/354 (4%) Query: 1 MYK---DFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M++ + L + F S + S L +K RG L CG++ + GF+ + + Sbjct: 1 MFRTSSRVLIVALAGLSSFLASCASLDSAAGSRLDLVKARGELLCGVSGKIPGFSFLNPD 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G + G DVD CRA+++A D K+QY PL A ERF AL+S +ID+LSRNT TL R+ Sbjct: 61 GRYTGLDVDICRAMAAAFVGDAEKVQYRPLTAPERFTALRSGEIDLLSRNTTHTLSRDAM 120 Query: 114 --LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 GL F P+ + DGQG +++ G+ S++ LSG SICV +GTTTE L D F + + Y Sbjct: 121 GGNGLRFGPVVFHDGQGLMVNAASGVRSLADLSGKSICVGSGTTTEQNLNDAFASQGLPY 180 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 PI ++ + ++ Y RC+A T D S L A + P H IL D ISK PLAPA++ Sbjct: 181 TPIKYQDLNQVVGGYLQGRCEAMTSDRSQLAAARSGFSDPQAHQILDDRISKEPLAPAVV 240 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGE 287 GD + ++W A++ AEE GITQ N++ Q + D + ++RFLG+D +G Sbjct: 241 GGDQPMGDAMTWVVNALIEAEERGITQANVDAVVKQAAADPSQTSLRRFLGVDP--GLGR 298 Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 LGL D+ ++IR GNYGE+++R+LG S + IPRG N L +GGLM +PP Sbjct: 299 KLGLADDFVVQVIRATGNYGEIYNRHLGLDSAVAIPRGANRLAGEGGLMISPPF 352 >gi|163742834|ref|ZP_02150218.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis 2.10] gi|161383798|gb|EDQ08183.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis 2.10] Length = 347 Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 140/349 (40%), Positives = 209/349 (59%), Gaps = 9/349 (2%) Query: 1 MYKDFFV---SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M F + + + L + + S L +K RG L C + GF ++ +GDW+ Sbjct: 1 MKNLFSMLSCAAMAAGGLSIAAPAAAQSTLETVKTRGHLNCQVGPPRAGFYQLLESGDWE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV CRA+++AIF DP+K+++ ++A RF +L + + D+LSR WT+ R+ +LG+ Sbjct: 61 GSDVAVCRAMAAAIFGDPNKVEFQSVSASVRFTSLANGESDVLSRTATWTVGRDAALGID 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + DGQGF++ K GI S L+GA++CV G T+E TL D+ +A+N+ + F+ Sbjct: 121 FTAPVFHDGQGFLVRKDSGIKSAFDLTGATVCVITGHTSEATLQDFSRANNLDIQAVAFD 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 ++ Y CDA T D L + PSEHV+LP+I+SK PL PA+ GD +W Sbjct: 181 DSAIVNETYLNGGCDAITTDKGVLASEARGFPDPSEHVVLPEILSKEPLTPAVRNGDNQW 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 +IV WT +A++ AEELGITQ N+ +++ + NP V RFLG + N G LGL KDW Sbjct: 241 GDIVQWTVFALINAEELGITQANVEEIAANPPNPLVARFLGAEGELNTG--LGLPKDWVV 298 Query: 298 RIIRHMGNYGEMFDRNLGNQSE--LKIPR--GYNALWSKGGLMYAPPIR 342 I+ +GNYGE+++ LG+ L IPR NALW++GGLM++PP R Sbjct: 299 HAIKAVGNYGEIYEHYLGDGRPEALGIPRAGSANALWTEGGLMFSPPFR 347 >gi|294675892|ref|YP_003576507.1| glutamate/aspartate ABC transporter periplasmic glutamate/aspartate-binding protein BztA [Rhodobacter capsulatus SB 1003] gi|294474712|gb|ADE84100.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein BztA [Rhodobacter capsulatus SB 1003] Length = 338 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 154/342 (45%), Positives = 221/342 (64%), Gaps = 4/342 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + + + + +AS L D+K RG L CG N GL GFA ANG ++GFD Sbjct: 1 MKKSAFFG--SVALAALVAGAASASTLDDVKARGQLICGSNPGLTGFAAPDANGVYQGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V C+A+++A+ DP K++Y+PL + RF AL S ++D+L RN+ WT R+ L L F Sbjct: 59 VAVCKAVAAAVLGDPMKVKYVPLTGETRFTALASGEVDVLVRNSTWTFSRDTELALDFVA 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF+++K G+SS +L GA+ICVQ GTTTE+ LAD+FKA+NM Y P+ Sbjct: 119 VNYYDGQGFMVNKSLGVSSAKELDGATICVQTGTTTEMNLADFFKANNMTYTPVNIADDA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + A CD+YT D S L + + T ++ VILP+IISK PL P + GD W +I Sbjct: 179 EGQQKFAAGACDSYTTDASGLASSRATLPNAADIVILPEIISKEPLGPVVRHGDNNWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W+ YA+V AEE GIT+ N+ +V+ T NP+++R LG++ ++G+ +GL D+ R I Sbjct: 239 VRWSFYALVAAEEYGITKANLEEVAASTQNPEIRRLLGLE--GDMGKKIGLDNDFAKRAI 296 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+F+ N+G + + + RG NA W++GGLMYAPP R Sbjct: 297 LASGNYGEVFEANIGASTSIGLARGLNAQWTQGGLMYAPPFR 338 >gi|87120913|ref|ZP_01076805.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Marinomonas sp. MED121] gi|86163751|gb|EAQ65024.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Marinomonas sp. MED121] Length = 325 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 138/327 (42%), Positives = 205/327 (62%), Gaps = 2/327 (0%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + A L D+KKRGFL+CG GFA N W+G ++D+C+ALSSA+F D Sbjct: 1 MGATAPVFADTLDDVKKRGFLRCGTGEAKAGFAMPGDNNQWQGMEIDYCKALSSAVFGDE 60 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +K + +P+ +K RF +L S++ID+L + T WT R+ LG+ F +FDGQGF++ K+ Sbjct: 61 TKFEVVPVTSKVRFTSLTSREIDVLVKGTTWTYSRDAKLGVDFAAYWFFDGQGFLIKKEL 120 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 G++S QL+GA+IC+ GTT+E +AD+F+ ++MKY P+V + E A + RCD T Sbjct: 121 GVTSAKQLNGATICISPGTTSEKNVADFFRTYDMKYKPVVIKAGPETLDALQKGRCDVIT 180 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D+SAL + + P + V+L D I+K PL+ + Q D+ W ++++WT A+V AEELG Sbjct: 181 NDLSALASDRQKFTNPDDFVVLQDNIAKEPLSLYVRQNDSRWKDVITWTRNALVEAEELG 240 Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 ITQ+N+ Q +K +P V R LG GE LGL W + I +GNYGE+F+RN+G Sbjct: 241 ITQENVGQHAKHPIDPRVARLLGAK--GAYGEMLGLPNTWAHDAISAVGNYGEIFERNVG 298 Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342 Q+ + + R N W GGL++APP R Sbjct: 299 EQTRMGLTRNLNQQWYDGGLVFAPPFR 325 >gi|197105093|ref|YP_002130470.1| lysine-arginine-ornithine-binding periplasmic protein [Phenylobacterium zucineum HLK1] gi|196478513|gb|ACG78041.1| lysine-arginine-ornithine-binding periplasmic protein [Phenylobacterium zucineum HLK1] Length = 337 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 146/324 (45%), Positives = 221/324 (68%), Gaps = 4/324 (1%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 +T + L +++RG + CG++ GL GFA A G W+GFDVD CRA+++A+F D ++++ Sbjct: 16 ATPSPTLEAVRRRGRVTCGVHPGLPGFAMRDARGIWRGFDVDVCRAVAAAVFGDAERVRF 75 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P++ +RF L++++IDILSRNT TL R+ LGL F TY+DGQGF++ + G++S Sbjct: 76 VPIDGSDRFRELRAERIDILSRNTSLTLSRDAGLGLTFPATTYYDGQGFLVARALGVASA 135 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +L GA +CVQAGT +E LAD+F+A + Y P++ + E+ Y + CD ++ DIS Sbjct: 136 EELGGARVCVQAGTASETNLADFFRARGLDYQPVLAKSEEDARRLYESDGCDVFSADISG 195 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L A + P+ HVILP++ISK PL P + Q D W +IV+WT +A+V AEELG++ + Sbjct: 196 LAASRSLLSNPNGHVILPNVISKEPLGPVVRQDDPAWADIVAWTVHAIVLAEELGLSSRT 255 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 + Q + T+P+ +R LG++ N+GE LG+ +DW Y++IR +G Y E+F R+LG S L Sbjct: 256 VEQARETATDPETRRLLGVE--GNLGELLGVRRDWAYQVIRQVGAYHEIFRRDLGADSAL 313 Query: 321 KIPRGYNALWS--KGGLMYAPPIR 342 K+ RG NALW+ K GLMYAPP+R Sbjct: 314 KLERGLNALWTAPKPGLMYAPPVR 337 >gi|123966465|ref|YP_001011546.1| ABC transporter for amino acids, substrate binding protein [Prochlorococcus marinus str. MIT 9515] gi|123200831|gb|ABM72439.1| ABC transporter for amino acids, substrate binding protein [Prochlorococcus marinus str. MIT 9515] Length = 349 Score = 310 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 141/350 (40%), Positives = 208/350 (59%), Gaps = 11/350 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M F I +L S S L I+KR L CG++ + GF+ ++ +G +K Sbjct: 1 MINRLFFGIAAFGLLLTGCASNQQENISRLSLIQKRDELICGVSGKIPGFSFIERDGKYK 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL- 116 G DVD C+A +SAI D KIQ+ PL A ERFLA+++ ID+LSRNT +TL R+ G Sbjct: 61 GLDVDICKAFASAIIGDSEKIQFRPLTAAERFLAIKTGDIDLLSRNTTFTLSRDSFEGNG 120 Query: 117 -AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F P+ + DGQG ++ K GI S+ +L+ SICV +GTTTE + D F++ ++ Y PI Sbjct: 121 LTFAPVVFHDGQGLMVKKNSGIDSIQELANKSICVGSGTTTEQNINDTFESLSLPYVPIK 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + ++ A Y RC+A T D S L A + +H+IL +++SK PLAPA + Sbjct: 181 YQDLNQVVAGYLQGRCEAMTSDRSQLAAARSGFKNAKDHIILDNVLSKEPLAPASNGSEQ 240 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQ----VSKDTTNPDVQRFLGIDKSSNIGEALGL 291 + + + WT +A++ AEE GITQ NI+ + ++RFLGID +GE +GL Sbjct: 241 KLADAMRWTIFALIAAEEQGITQLNIDDKVQLAKNNPQLKSLRRFLGID--GGLGEKIGL 298 Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 D+ +I+ GNYGE++DRNLG S++ IPRG N ++SKGGL +PP Sbjct: 299 RNDFVVNVIKATGNYGEIYDRNLGKDSDVPIPRGLNKIYSKGGLHISPPF 348 >gi|33594685|ref|NP_882329.1| putative ABC transporter periplasmic amino acid-binding protein [Bordetella pertussis Tohama I] gi|33598479|ref|NP_886122.1| putative ABC transporter periplasmic amino acid-binding protein [Bordetella parapertussis 12822] gi|33603422|ref|NP_890982.1| putative ABC transporter periplasmic amino acid-binding protein [Bordetella bronchiseptica RB50] gi|33564761|emb|CAE44086.1| putative ABC transporter periplasmic amino acid-binding protein [Bordetella pertussis Tohama I] gi|33574608|emb|CAE39258.1| putative ABC transporter periplasmic amino acid-binding protein [Bordetella parapertussis] gi|33577546|emb|CAE34811.1| putative ABC transporter periplasmic amino acid-binding protein [Bordetella bronchiseptica RB50] Length = 338 Score = 310 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 144/324 (44%), Positives = 227/324 (70%), Gaps = 3/324 (0%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S + + ++KK+GF++CG++TG+ GF+ + G+WKG DVD CRA+++ +F D SK Sbjct: 18 SVAHAGATFDNVKKKGFVQCGVSTGIPGFSIADSKGEWKGLDVDMCRAIAATMFGDASKF 77 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + PLN ++RF ALQS ++D+L+RNT TL R+ +LGL + Y+D QG ++ K+ G+ Sbjct: 78 KVTPLNTQQRFTALQSGEVDVLTRNTTVTLTRDTTLGLIGVGVNYYDSQGVMVSKELGVK 137 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S +L+GA++CVQ GTTTEL LAD+F+ + +++ P+V ++ +EI A+ A RCDA+T D Sbjct: 138 SAKELNGATVCVQPGTTTELNLADWFRGNKIEFKPVVIDKYDEIVRAFSAGRCDAFTTDK 197 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 S L + + T ++P +VILP+ SK PL P + QGD +W+N+V W+ AM+ AEE GIT Sbjct: 198 SQLASTRTTLEKPDNYVILPEDFSKEPLGPMVRQGDEQWFNVVRWSLNAMLEAEEYGITS 257 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 KN+++++K ++NP++QR LG+ + +G+ LG+ W + II+ +GNYGE F+ LG S Sbjct: 258 KNVDEMAK-SSNPNIQRILGV--TPGMGKNLGVDDKWAFNIIKQVGNYGESFEATLGKSS 314 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 +K+ RG NA + +GGLMY P+R Sbjct: 315 AMKLERGLNASYKQGGLMYGWPVR 338 >gi|114771237|ref|ZP_01448657.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [alpha proteobacterium HTCC2255] gi|114548162|gb|EAU51049.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [alpha proteobacterium HTCC2255] Length = 339 Score = 310 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 148/343 (43%), Positives = 211/343 (61%), Gaps = 5/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + F + A L D++ G LKCG+ TGL GFA ANG W GFD Sbjct: 1 MKKSAFFG--TIAAATFAAGFAAAGTLEDVQAAGELKCGVTTGLAGFALADANGVWDGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V CRA+++A+ D + ++++P K RF AL S +ID+L+RNT WT R++ L F Sbjct: 59 VAVCRAVAAAVLGDGNAVKFVPTTGKTRFTALASGEIDLLARNTTWTFSRDVDLKFEFVG 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF+ K G+SS L GA++C+Q GTTTEL LAD+F+++N+ Y P+ E Sbjct: 119 VNYYDGQGFMAPKALGVSSAKDLDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A Y A CD +T D S L + + T + P +H++LP+I+SK PL P + GD W +I Sbjct: 179 EAQAQYLAGACDVFTTDASGLASTRATFENPDDHIVLPEIVSKEPLGPLVRHGDNNWGDI 238 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDT-TNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 WT A++TAEELG+T N+ + + + NP+V R LG + ++G LGL K W R Sbjct: 239 ARWTLNALITAEELGVTSANVAEHTANAGNNPEVNRLLGTE--GDLGGMLGLDKQWASRA 296 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I GNYGE+F++N+G + + I RG NA W+ GGL+Y+ P R Sbjct: 297 IAVNGNYGEIFEKNIGVNTPIGIARGLNASWTNGGLIYSAPFR 339 >gi|152994191|ref|YP_001339026.1| extracellular solute-binding protein [Marinomonas sp. MWYL1] gi|150835115|gb|ABR69091.1| extracellular solute-binding protein family 3 [Marinomonas sp. MWYL1] Length = 343 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 132/325 (40%), Positives = 209/325 (64%), Gaps = 4/325 (1%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + S L +K+RG++ C I GF + G+W+G D+D CR ++SA+F D SK++ Sbjct: 21 AADTTSTLDAVKERGYVNCVIGNSFPGFYSLNKAGEWQGMDIDMCRGVASAVFGDASKVK 80 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +LP+ + F +++S + DILS+ WTL R+ + GL F ++DGQGF++ K G+ S Sbjct: 81 FLPVQWAQSFTSIKSGKGDILSKGMTWTLSRDSAQGLDFLDTYFYDGQGFMVRKDLGVKS 140 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V +L+GA++CV GT++EL +ADY +A+N+ +VF+ + A+ + CDA T D S Sbjct: 141 VKELNGATVCVLTGTSSELNIADYSRANNLDIKTVVFDDSSVRNTAFFNNNCDALTNDKS 200 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L A + P+++VILP+ ISK L+ A+ Q D+EW N+V WT AMV AEE G+ + Sbjct: 201 GLAAQRSAAPNPNDYVILPETISKEALSFAVKQNDSEWANVVKWTFAAMVAAEEFGVNSQ 260 Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319 N+ ++ ++ +P V+R LG++ N G LGL +DW +++I+++GNYGE+++RN+G S Sbjct: 261 NVEKMRAESQSPVVRRLLGVEGDLNTG--LGLPQDWAFQVIKNVGNYGEVYERNVGTDSV 318 Query: 320 LKIPR--GYNALWSKGGLMYAPPIR 342 L + R N LW+KGGLMYA R Sbjct: 319 LGLDREGTLNELWTKGGLMYAKSFR 343 >gi|221370067|ref|YP_002521163.1| Extracellular solute-binding protein, family 3 precursor [Rhodobacter sphaeroides KD131] gi|221163119|gb|ACM04090.1| Extracellular solute-binding protein, family 3 precursor [Rhodobacter sphaeroides KD131] Length = 335 Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats. Identities = 129/323 (39%), Positives = 206/323 (63%), Gaps = 4/323 (1%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 F+ + L +K+RG + CG++ GFA + G W GF+VDFC A+++A+F D +K++ Sbjct: 15 FAQSGDTLAAVKERGEVLCGVHPARHGFAAPDSQGKWSGFEVDFCHAIAAAVFGDANKVR 74 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++ L++++RF A+QS ++D+L+RN TL R+ +LGL F P ++ G GF++ GI Sbjct: 75 FVALSSQQRFPAIQSGEVDVLARNVTATLSRDTALGLNFAPPIFYTGTGFLVRAADGIEK 134 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V L GA+IC+ G+TTE +A F A + Y P+V E +++ AY RCDA T D + Sbjct: 135 VEDLDGAAICMAPGSTTERNVAQIFAARGLSYTPVVIENNKQLVDAYVTGRCDALTKDKA 194 Query: 200 ALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 AL ++ + P +HV+LP I SK PLA A+ QGD +WY++V W YA AEELG+TQ Sbjct: 195 ALPGVRAFDTEVPGDHVLLPGIYSKEPLAMAVRQGDDKWYDLVKWVTYATFNAEELGVTQ 254 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 N++++ K + +PD+Q LG+ + G LG+ DW Y I++ +GNY +++ R+ G + Sbjct: 255 ANVDEM-KASDDPDIQTLLGV--IGDNGTKLGVPNDWAYAIVKQVGNYEDIYMRHFGPDT 311 Query: 319 ELKIPRGYNALWSKGGLMYAPPI 341 + + R N LW++GGL+Y P+ Sbjct: 312 PVALDRDQNQLWTEGGLLYGFPM 334 >gi|293602099|ref|ZP_06684552.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Achromobacter piechaudii ATCC 43553] gi|292819501|gb|EFF78529.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Achromobacter piechaudii ATCC 43553] Length = 357 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 142/317 (44%), Positives = 223/317 (70%), Gaps = 3/317 (0%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 ++KK+GF++CG++TG+ GF+ + G++KG DVD CRA++S +F D +K+++ PLN Sbjct: 44 TFDNVKKKGFVQCGVSTGIPGFSIADSKGEYKGIDVDMCRAIASTMFGDATKVKFTPLNT 103 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ++RF ALQS ++D+L+RNT TL R+ +LGL + Y+D QG ++ K + S +L+G Sbjct: 104 QQRFTALQSGEVDVLTRNTTVTLTRDTTLGLIGVGVNYYDSQGVMVSKDLNVKSAKELNG 163 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 A+ICVQ GTTTEL LAD+F+ +++ P+V ++ +EI A+ A RCDA+T D S L + + Sbjct: 164 ATICVQPGTTTELNLADWFRGQKIEFKPVVIDKYDEIIRAFSAGRCDAFTTDKSQLASTR 223 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 T + P + VILP+ SK PL P + QGD +W+N+V W+ AM+ AEE GIT+ N+++++ Sbjct: 224 TTLENPDKFVILPEDFSKEPLGPMVRQGDEQWFNVVRWSLNAMLEAEEYGITKANVDEMT 283 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 K ++NP++QR LG+ + +G+ LG+ W Y II+++GNYGE F+ LG S +K+ RG Sbjct: 284 K-SSNPNIQRILGV--TPGMGKNLGVDDKWAYNIIKNVGNYGESFEATLGKGSAMKLERG 340 Query: 326 YNALWSKGGLMYAPPIR 342 NA + +GGLMY P+R Sbjct: 341 LNASYKQGGLMYGWPVR 357 >gi|126464337|ref|YP_001045450.1| extracellular solute-binding protein [Rhodobacter sphaeroides ATCC 17029] gi|126106148|gb|ABN78678.1| extracellular solute-binding protein, family 3 [Rhodobacter sphaeroides ATCC 17029] Length = 345 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 129/323 (39%), Positives = 206/323 (63%), Gaps = 4/323 (1%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 F+ + L +K+RG + CG++ GFA + G W GF+VDFC A+++A+F D +K++ Sbjct: 25 FAQSGDTLAAVKERGEVLCGVHPARHGFAAPDSQGKWSGFEVDFCHAIAAAVFGDANKVR 84 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++ L++++RF A+QS ++D+L+RN TL R+ +LGL F P ++ G GF++ GI Sbjct: 85 FVALSSQQRFPAIQSGEVDVLARNVTATLSRDTALGLNFAPPIFYTGTGFLVRAADGIEK 144 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V L GA+IC+ G+TTE +A F A + Y P+V E +++ AY RCDA T D + Sbjct: 145 VEDLDGAAICMAPGSTTERNVAQIFAARGLSYTPVVIENNKQLVDAYVTGRCDALTKDKA 204 Query: 200 ALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 AL ++ + P +HV+LP I SK PLA A+ QGD +WY++V W YA AEELG+TQ Sbjct: 205 ALPGVRAFDTEVPGDHVLLPGIYSKEPLAMAVRQGDDKWYDLVKWVTYATFNAEELGVTQ 264 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 N++++ K + +PD+Q LG+ + G LG+ DW Y I++ +GNY +++ R+ G + Sbjct: 265 ANVDEM-KASDDPDIQTLLGV--IGDNGTKLGVPNDWAYAIVKQVGNYEDIYMRHFGPDT 321 Query: 319 ELKIPRGYNALWSKGGLMYAPPI 341 + + R N LW++GGL+Y P+ Sbjct: 322 PVALDRDQNQLWTEGGLLYGFPM 344 >gi|33865374|ref|NP_896933.1| ABC transporter, substrate binding protein for amino acids [Synechococcus sp. WH 8102] gi|33632543|emb|CAE07355.1| ABC transporter, substrate binding protein for amino acids [Synechococcus sp. WH 8102] Length = 353 Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats. Identities = 140/349 (40%), Positives = 201/349 (57%), Gaps = 12/349 (3%) Query: 3 KDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 + + + ++ + S L +K+R L CG++ + GF+ + G + G Sbjct: 6 RRILIGAITVVAGLLGGCASLDEAGRSRLDLVKQRDELLCGVSGKIPGFSFLTPKGTYTG 65 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGL 116 DVD CRA+++A D K+QY PL A ERF AL+S +ID+LSRNT TL R+ GL Sbjct: 66 LDVDICRAMAAAFLGDADKVQYRPLTAPERFTALRSGEIDLLSRNTTHTLSRDAEGGNGL 125 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F P+ + DGQG I+ G++S++ LSG +ICV +GTTTE L D F + + Y PI + Sbjct: 126 GFAPVVFHDGQGLIVPVNSGVTSLADLSGQAICVGSGTTTEQNLNDAFASKGIPYTPIKY 185 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + ++ Y RC A T D S L A + P HVIL D +SK PLAPA++ GD Sbjct: 186 QDLNQVVGGYLQGRCQAMTSDRSQLAAARSGFIEPEGHVILEDRLSKEPLAPAVVGGDQR 245 Query: 237 WYNIVSWTHYAMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292 + ++W YA++ AEE GITQ N++ D + ++RFLG+D +G LGL Sbjct: 246 LVDAMTWVVYALIEAEERGITQANLDRQLRAAEADPSQAAMRRFLGVD--GGLGRKLGLP 303 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 D+ + IR GNYGE++DR+LG +S + IPRG N L GGLM APP Sbjct: 304 DDFVVQAIRATGNYGEIYDRHLGPESPVAIPRGANRLAEDGGLMIAPPF 352 >gi|311109074|ref|YP_003981927.1| general L-amino acid-binding periplasmic protein AapJ 4 [Achromobacter xylosoxidans A8] gi|310763763|gb|ADP19212.1| general L-amino acid-binding periplasmic protein AapJ 4 [Achromobacter xylosoxidans A8] Length = 338 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 143/317 (45%), Positives = 221/317 (69%), Gaps = 3/317 (0%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 ++KK+GF++CG++TG+ GF+ + G++KG DVD CRA++S +F D +K+++ PLN Sbjct: 25 TFDNVKKKGFVQCGVSTGIPGFSIADSKGEYKGIDVDLCRAIASTMFGDATKVKFTPLNT 84 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ++RF ALQS ++D+L+RNT TL R+ +LGL + Y+D QG ++ K + S +L+G Sbjct: 85 QQRFTALQSGEVDVLTRNTTVTLTRDTTLGLIGVGVNYYDSQGVMVSKDLNVKSAKELNG 144 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 A+ICVQ GTTTEL LAD+F+ +++ P+V ++ +EI A+ A RCDA+T D S L + + Sbjct: 145 ATICVQPGTTTELNLADWFRGQKIEFKPVVIDKYDEIIRAFSAGRCDAFTTDKSQLASTR 204 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 T + P + VILP+ SK PL P + QGD +W+NIV W+ AM+ AEE GIT+ N+++++ Sbjct: 205 TTLENPDKFVILPEDFSKEPLGPMVRQGDEQWFNIVRWSLNAMLEAEEYGITKANVDEMA 264 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 K + NP++QR LG+ + +G+ LG+ W Y II+++GNYGE F+ LG S +K+ RG Sbjct: 265 K-SPNPNIQRILGV--TPGMGKNLGVDDKWAYNIIKNVGNYGESFENTLGKSSAMKLERG 321 Query: 326 YNALWSKGGLMYAPPIR 342 NA + GGLMY P+R Sbjct: 322 LNASYKNGGLMYGWPVR 338 >gi|47114851|emb|CAE48356.1| unnamed protein product [Methylocystis sp. SC2] Length = 343 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 145/319 (45%), Positives = 213/319 (66%), Gaps = 4/319 (1%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L I KRG+L CG++ GFA+ G+W+GFDVDFCRA++SA+ DDP+K +++ L Sbjct: 29 GPTLAQIMKRGYLTCGVS-DAPGFAQRDGAGEWRGFDVDFCRAVASAVLDDPNKARFVEL 87 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + KER ALQ+ +D+L + WT R+ S L + I DGQGF++ +++ +SV L Sbjct: 88 SQKERAGALQAGAVDLLVSASPWTQARDTSHRLIYAAIFLHDGQGFLVRRQRKTASVQDL 147 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GASICV+ GT EL +AD+F+A KY P +F +E+ AY +CDA T D+S L+ Sbjct: 148 DGASICVEQGTPYELAVADFFRARKEKYDPKLFPSLEDAAKAYDEEKCDALTADVSTLHG 207 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 +++ P++H +LPDI+SKSP P + QGD +W NIV WT +AM+ AEEL +++ N + Sbjct: 208 VRIGLTAPADHAVLPDILSKSPRGPLVRQGDDQWLNIVRWTLFAMIDAEELEVSKANADA 267 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + NP ++R LG+D G+ LGL++DW YRI++H+GNY ++F+RNLG + + Sbjct: 268 AL-SSENPQIRRLLGVD--GAHGDDLGLSQDWAYRIVKHVGNYADVFERNLGRGAPYAME 324 Query: 324 RGYNALWSKGGLMYAPPIR 342 R NALW+KGGLMYAPP+R Sbjct: 325 RRLNALWNKGGLMYAPPVR 343 >gi|78779551|ref|YP_397663.1| extracellular solute-binding protein [Prochlorococcus marinus str. MIT 9312] gi|78713050|gb|ABB50227.1| amino acid ABC transporter substrate-binding protein, PAAT family [Prochlorococcus marinus str. MIT 9312] Length = 349 Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats. Identities = 140/350 (40%), Positives = 206/350 (58%), Gaps = 11/350 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M F I +L S S L I++R L CG++ + GF+ ++ +G +K Sbjct: 1 MMNRLFFGIAAFGLLLTGCASNQNDNISRLSLIQERDELICGVSGKIPGFSFIERDGSYK 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LG 115 G DVD C+A ++AI D KIQ+ PL A ERFLA+++ ID+LSRNT TL R+ G Sbjct: 61 GLDVDICKAFAAAIIGDSEKIQFRPLTAAERFLAIKTGDIDLLSRNTTLTLSRDSFGGNG 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 L F P+ + DGQG ++ K GI S+ +L+ SICV +GTTTE + D F++ ++ Y PI Sbjct: 121 LTFAPVVFHDGQGLMVKKNSGIESIQELANKSICVGSGTTTEQNINDTFESLSLPYVPIK 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + ++ A Y RC A T D S L A + +H+IL D++SK PLAPA + Sbjct: 181 YQDLNQVVAGYLQGRCQAMTSDRSQLAAARSGFKNAKDHIILDDVLSKEPLAPASDGSEQ 240 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQ----VSKDTTNPDVQRFLGIDKSSNIGEALGL 291 + + + WT +A++ AEE GITQ NI + ++RFLG+D +GE +GL Sbjct: 241 KLADAMRWTVFALIAAEEQGITQSNIADRLQLAKNNPQLKSLRRFLGVD--GGLGEKIGL 298 Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 D+ +I+ GNYGE++DRNLG S++ IPRG N ++SKGGL +PP Sbjct: 299 RNDFVVNVIKATGNYGEIYDRNLGIDSDVPIPRGLNEIYSKGGLHISPPF 348 >gi|82545639|ref|YP_409586.1| periplasmic binding transport protein [Shigella boydii Sb227] gi|81247050|gb|ABB67758.1| putative periplasmic binding transport protein [Shigella boydii Sb227] Length = 321 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 149/321 (46%), Positives = 216/321 (67%), Gaps = 18/321 (5%) Query: 38 CGINTGLVGFAEVKANGDWKGFDVDF----------------CRALSSAIFDDPSKIQYL 81 CGI+ GL+GF+ A+G + G DVD CR++++A+F D +K++Y Sbjct: 3 CGISDGLLGFSYADADGKFSGIDVDVDVDVDVDVDVDVDVDVCRSVAAAVFGDDTKVKYT 62 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 PL AKERF ALQS ++D+LSRNT WT R+ +G+AF +TY+DG GF+ H K G+ S Sbjct: 63 PLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAK 122 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E A + RCD D S L Sbjct: 123 ELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQL 182 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 YAL++ P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI +N+ Sbjct: 183 YALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNV 242 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 ++ + + PD+ LG + + G+ L L W Y II+ +GNY E+F+RN+G++S LK Sbjct: 243 DEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLK 300 Query: 322 IPRGYNALWSKGGLMYAPPIR 342 I RG N LW+ GG+ YAPP+R Sbjct: 301 IKRGQNNLWNNGGIQYAPPVR 321 >gi|72382453|ref|YP_291808.1| extracellular solute-binding protein [Prochlorococcus marinus str. NATL2A] gi|72002303|gb|AAZ58105.1| amino acid ABC transporter substrate-binding protein, PAAT family [Prochlorococcus marinus str. NATL2A] Length = 353 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 141/354 (39%), Positives = 213/354 (60%), Gaps = 15/354 (4%) Query: 1 MYKDF-------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K V + L T+ N+S L IK R L CG++ + GF+ +K++ Sbjct: 1 MIKKIMRRLVSVIVGLAALSAGCATTNQDNSSRLNLIKNRNELICGVSGKIPGFSFLKSD 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G ++G DVD C+A ++AI D KIQY PL A ERF A+++ +ID+LSRNT +TL R+ S Sbjct: 61 GTYQGLDVDICKAFAAAIIGDSEKIQYRPLTAAERFTAIKTGEIDLLSRNTTFTLSRDSS 120 Query: 114 --LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 GL F P+ + DGQG ++ K+ IS + L+ SICV +GTTTE + D F++ ++ Y Sbjct: 121 GGNGLTFAPVVFHDGQGLMVKKESKISGLKDLANKSICVGSGTTTEQNINDAFESASLPY 180 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 PI ++ + ++ A Y RC A T D S L A + P EH+IL D++SK PLAPA Sbjct: 181 TPIKYQDLNQVVAGYLQGRCSAMTSDRSQLAAARSGFKNPQEHIILDDVLSKEPLAPASD 240 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQ----VSKDTTNPDVQRFLGIDKSSNIGE 287 D + + + W +++++AEE GIT+ NI++ + ++RFLGID +GE Sbjct: 241 GQDQKLADAMRWVVFSLISAEEQGITKSNIDKKVQIAKNNPQLKPLRRFLGID--GGLGE 298 Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 +GL+ D+ ++I GNYGE+++R+LG SE+ IPRG N L+ KGG+ +PP Sbjct: 299 KIGLSNDFVVKVISSTGNYGEIYERHLGQNSEVPIPRGQNELYKKGGVHISPPF 352 >gi|260434256|ref|ZP_05788226.1| general L-amino acid-binding periplasmic protein AapJ [Synechococcus sp. WH 8109] gi|260412130|gb|EEX05426.1| general L-amino acid-binding periplasmic protein AapJ [Synechococcus sp. WH 8109] Length = 368 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 141/354 (39%), Positives = 207/354 (58%), Gaps = 15/354 (4%) Query: 1 MYK---DFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M++ + L + F S + S L +K RG L CG++ + GF+ + ++ Sbjct: 16 MFRSSSRVLIVALAGLSSFLASCASLDSAAGSRLDLVKARGELLCGVSGKIPGFSFLSSD 75 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G + G DVD CRA+++A D K+QY PL A ERF AL+S +ID+LSRNT TL R+ Sbjct: 76 GRYTGLDVDICRAMAAAFVGDAEKVQYRPLTAPERFTALRSGEIDLLSRNTTHTLSRDAV 135 Query: 114 --LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 GL F P+ + DGQG +++ G+ S++ LSG SICV +GTTTE L D F + + Y Sbjct: 136 GGNGLRFGPVVFHDGQGLMVNAASGVRSLADLSGKSICVGSGTTTEQNLNDAFASKGLPY 195 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 PI ++ + ++ Y RC A T D S L A + P H IL D ISK PL+PA++ Sbjct: 196 IPIKYQDLNQVVGGYLQGRCAAMTSDRSQLAAARSGFSDPEAHQILDDRISKEPLSPAVV 255 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGE 287 GD + ++W ++ AEE GITQ N++ Q + D++ ++RFLG+D +G Sbjct: 256 GGDQPMGDAMTWVINGLIEAEERGITQANVDAVVKQAAADSSQTALRRFLGVDP--GLGR 313 Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 LGL D+ ++IR GNYGE+++R+LG S + IPRG N L +GGLM +PP Sbjct: 314 KLGLADDFVVQVIRATGNYGEIYNRHLGPDSAVAIPRGANRLAGEGGLMISPPF 367 >gi|163854807|ref|YP_001629105.1| putative extracellular solute-binding protein [Bordetella petrii DSM 12804] gi|163258535|emb|CAP40834.1| putative extracellular solute-binding protein [Bordetella petrii] Length = 338 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 145/317 (45%), Positives = 220/317 (69%), Gaps = 3/317 (0%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 +KK+GF++CG++TG+ GF+ + G+WKG DV CRA+++ +F+D +K + PLN Sbjct: 25 TFDSVKKKGFVQCGVSTGIPGFSMADSKGEWKGIDVAMCRAIAATMFNDSTKFKVTPLNT 84 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ++RF ALQS ++D+L+RNT TL R+ +LGL + Y+D QG ++ K G+ S +L+G Sbjct: 85 QQRFTALQSGEVDVLTRNTTQTLTRDTTLGLIGAGVNYYDSQGVMVSKDLGVKSAKELNG 144 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 A+ICVQ GTTTEL LAD+F+ +++ P+V ++ +EI A+ A RCDA+T D S L + + Sbjct: 145 ATICVQPGTTTELNLADWFRGQKIEFKPVVIDKYDEIIRAFSAGRCDAFTTDKSQLASTR 204 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 T + P VILP+ SK PL P + QGD +W+NIV W+ AM+ AEE GIT KN+++++ Sbjct: 205 TTLENPDNFVILPEDFSKEPLGPMVRQGDEQWFNIVRWSLNAMLEAEEYGITSKNVDEMA 264 Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325 K ++NP++QR LG+ + +G+ LG+ W Y II+ +GNYGE+F+R LG S +K+ RG Sbjct: 265 K-SSNPNIQRILGV--TPGMGKNLGVDDKWAYTIIKQVGNYGEVFERTLGADSAMKLERG 321 Query: 326 YNALWSKGGLMYAPPIR 342 NA + GGLMY P+R Sbjct: 322 LNASYKDGGLMYGWPVR 338 >gi|124026134|ref|YP_001015250.1| extracellular solute-binding protein [Prochlorococcus marinus str. NATL1A] gi|123961202|gb|ABM75985.1| extracellular solute-binding protein, family 3 [Prochlorococcus marinus str. NATL1A] Length = 353 Score = 307 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 141/354 (39%), Positives = 213/354 (60%), Gaps = 15/354 (4%) Query: 1 MYKDF-------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K V + L T+ N+S L IK R L CG++ + GF+ +K++ Sbjct: 1 MIKKIMRRLVSVIVGLAALSAGCATTNQDNSSRLNLIKNRNELICGVSGKIPGFSFLKSD 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G ++G DVD C+A ++AI D KIQY PL A ERF A+++ +ID+LSRNT +TL R+ S Sbjct: 61 GTYQGLDVDICKAFAAAIIGDSEKIQYRPLTAAERFTAIKTGEIDLLSRNTTFTLSRDSS 120 Query: 114 --LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 GL F P+ + DGQG ++ K+ IS + L+ SICV +GTTTE + D F++ ++ Y Sbjct: 121 GGNGLTFAPVVFHDGQGLMVKKESKISGLKDLANKSICVGSGTTTEQNINDAFESASLPY 180 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 PI ++ + ++ A Y RC A T D S L A + P EH+IL D++SK PLAPA Sbjct: 181 TPIKYQDLNQVVAGYLQGRCSAMTSDRSQLAAARSGFKNPKEHIILEDVLSKEPLAPASD 240 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQ----VSKDTTNPDVQRFLGIDKSSNIGE 287 D + + + W +++++AEE GIT+ NI++ + ++RFLGID +GE Sbjct: 241 GQDQKLADAMRWVVFSLISAEEQGITKSNIDKKVQIAKNNPQLKPLRRFLGID--GGLGE 298 Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 +GL+ D+ ++I GNYGE+++R+LG SE+ IPRG N L+ KGG+ +PP Sbjct: 299 KIGLSNDFVVKVISSTGNYGEIYERHLGQNSEVPIPRGQNELYKKGGVHISPPF 352 >gi|124022922|ref|YP_001017229.1| amino acid ABC transporter substrate-binding protein [Prochlorococcus marinus str. MIT 9303] gi|123963208|gb|ABM77964.1| ABC transporter for amino acids, substrate binding protein [Prochlorococcus marinus str. MIT 9303] Length = 349 Score = 307 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 137/350 (39%), Positives = 206/350 (58%), Gaps = 11/350 (3%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + F ++ L +L S S L I KRG L CG++ + GF+ + NG ++ Sbjct: 1 MIRRFATGLVTLSLLATGCASIDQGGGSRLELISKRGQLHCGVSGKIPGFSFLLGNGRYE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI--SLG 115 G DVD CRA+++A+ D +K+QY PL A ERF AL++ +ID+LSRNT L R+ G Sbjct: 61 GLDVDICRAMAAAVVGDATKVQYRPLTAPERFTALKTGEIDLLSRNTTLNLSRDAAGGNG 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 L F P+ + DGQG ++ + GI + L ++ICV +GTTTE L D F+ + Y PI Sbjct: 121 LTFAPVVFHDGQGLMVKRSTGIKGLQDLKASNICVGSGTTTEQNLNDAFQERKLSYTPIK 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + ++ A Y RC A T D S L A + P +H+IL ++SK PLAPA + GD Sbjct: 181 YQDLNQVVAGYLQGRCLAMTSDRSQLAAARSGFPDPEQHIILDVVLSKEPLAPASVGGDQ 240 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSK----DTTNPDVQRFLGIDKSSNIGEALGL 291 + + W +A+ AEE GITQ+N++ + + ++RFLG+D +G+ LGL Sbjct: 241 RLGDAIRWVVFALFAAEEFGITQENVDSKLQQAKTNPQMSSLRRFLGVDA--GLGQKLGL 298 Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 D+ ++IR GNYGE+++R+LG S + IPRG N + +GGL+ APP Sbjct: 299 ADDFVVKVIRATGNYGEIYNRHLGPNSSVPIPRGLNRSYRQGGLLIAPPF 348 >gi|83858265|ref|ZP_00951787.1| ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein [Oceanicaulis alexandrii HTCC2633] gi|83853088|gb|EAP90940.1| ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein [Oceanicaulis alexandrii HTCC2633] Length = 353 Score = 307 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 132/343 (38%), Positives = 206/343 (60%), Gaps = 5/343 (1%) Query: 3 KDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + F S S S+ + ++++RG L+CG++TGLVGFA+ G W GF Sbjct: 13 RRLAKGAAAFALGFTVSHSDLDSVTSHMDEVQRRGVLRCGVDTGLVGFAQTDETGSWSGF 72 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +V+ CRA ++A +DP + +++P +RF A++ ++DIL RNT WTL R G+ F Sbjct: 73 EVELCRAYAAAFLNDPDRAEFIPTTTLDRFRAVREGEVDILLRNTSWTLSRATLQGVRFA 132 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I Y+DGQGF+ G++S +LSGA ICVQ TT+ L L DY + + + + + E V Sbjct: 133 GIYYYDGQGFLTPADLGLTSAQELSGARICVQPETTSALNLDDYAERYGLDFTIVSVETV 192 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + AY A +CDA+T D+S L + + P H++LPD+ISK PL+P + D + Sbjct: 193 ADARTAYEAGQCDAFTSDVSRLAGFRRSLSEPDRHMVLPDVISKEPLSPVVRDDDDAFAM 252 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V W +++ AEE G+TQ + ++ P+V+R L +D+ + +LGL D+ + Sbjct: 253 AVEWVLTSLIAAEEYGVTQSQAASADQTSSRPEVRRLLEVDE--EVAASLGLENDFARQA 310 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I G+YGE+F+RNLG S+L++ RG NA W +GGL+YAPP+R Sbjct: 311 IAVGGHYGELFERNLGEASQLQLERGLNAQWKEGGLLYAPPVR 353 >gi|149925439|ref|ZP_01913703.1| probable amino acid-binding protein [Limnobacter sp. MED105] gi|149825556|gb|EDM84764.1| probable amino acid-binding protein [Limnobacter sp. MED105] Length = 343 Score = 307 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 153/336 (45%), Positives = 228/336 (67%), Gaps = 4/336 (1%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 + L L + + +L I KR ++CG+++G+ GF+ + ++G W+G DV CRA+ Sbjct: 11 LLGTLFCLLVANTAQAGPVLDAIYKRDAVRCGVSSGVAGFSALGSDGQWRGLDVAVCRAV 70 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++A+ D K+Q+ PL++++RF ALQ+ QIDILSRNT WTL R+ L F ITY+DGQ Sbjct: 71 AAAVLGDAQKVQFTPLSSQQRFAALQAGQIDILSRNTTWTLGRDAGLNAHFAAITYYDGQ 130 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 G +MHK+ G+ S +L GA ICVQ+GTT E L+ Y + + IV++ E A+ Sbjct: 131 GILMHKRFGVKSAKELKGAEICVQSGTTNEKNLSTYLGSQGITAKAIVYDNFEAAYKAFF 190 Query: 188 AHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + RC A++ D+SAL LK + RP ++V+LP++ SK PL PA+++GD E++ IV W + Sbjct: 191 SGRCQAFSTDVSALIGLKSSQSGRPDDYVVLPEVFSKEPLGPAVLRGDDEFFAIVKWVVF 250 Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306 AM+ AEELG+ + NI Q +++NP VQR LG + N+G+ LGL +DW +I++ +GNY Sbjct: 251 AMIEAEELGVGKGNIEQAL-NSSNPAVQRLLG--GAENLGKPLGLPRDWVVKILQQVGNY 307 Query: 307 GEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GE+F+ NLG QS LK+ RG NALW++GGLMYAPP+R Sbjct: 308 GEVFEENLGKQSPLKLERGLNALWTQGGLMYAPPLR 343 >gi|317404416|gb|EFV84833.1| extracellular solute-binding protein [Achromobacter xylosoxidans C54] Length = 338 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 143/340 (42%), Positives = 230/340 (67%), Gaps = 3/340 (0%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++ + + ++ + + ++KK+GF++CG++TG+ GF+ + G++KG DVD Sbjct: 2 KVLKLAAIGTALFAASAAANAGATFDNVKKKGFVQCGVSTGIPGFSIADSKGEYKGLDVD 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 CRA+++ +F D SK + PLN ++RF ALQS ++D+L+RNT TL R+ +LGL + Sbjct: 62 LCRAVAATMFGDASKFKVTPLNTQQRFTALQSGEVDVLTRNTTVTLTRDTTLGLIGVGVN 121 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+D QG ++ K + S +L+GA+ICVQ GTTTEL LAD+F+ +++ P+V ++ +EI Sbjct: 122 YYDSQGVMVSKDLNVKSAKELNGATICVQPGTTTELNLADWFRGQKIEFKPVVIDKYDEI 181 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A+ A RCDA+T D S L + + T + P +++ILP+ SK PL P + QGD +W+N++ Sbjct: 182 IRAFSAGRCDAFTTDKSQLASTRTTLENPDKYIILPEDFSKEPLGPMVRQGDEQWFNVIR 241 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 W+ AM+ AEE GIT KN+++++K +TNP++QR LG+ + +G+ LG+ W Y II+ Sbjct: 242 WSLNAMLEAEEYGITSKNVDEMTK-STNPNIQRILGV--TPGMGKNLGVDDKWAYNIIKQ 298 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE F+ LG S +K+ RG NA + +GGLMY P+R Sbjct: 299 VGNYGESFEATLGKSSAMKLERGLNASYKQGGLMYGWPVR 338 >gi|148239754|ref|YP_001225141.1| ABC transporter, substrate binding protein for amino acids [Synechococcus sp. WH 7803] gi|147848293|emb|CAK23844.1| ABC transporter, substrate binding protein for amino acids [Synechococcus sp. WH 7803] Length = 338 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 132/340 (38%), Positives = 205/340 (60%), Gaps = 8/340 (2%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L + T AS L +++RG L+CG++ + GF+ + G + G DVD C+A + Sbjct: 1 MLVGLQACATLGEGGASRLDLVRQRGELRCGVSGKIPGFSFLDREGRYAGLDVDMCKAFA 60 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLAFRPITYFDG 126 +A D +K++Y PL A ERF AL++ +ID+LSRNT + L R+ S G+AF P+ + DG Sbjct: 61 AAFVGDANKVEYRPLTAPERFTALRTGEIDLLSRNTTFNLSRDASGGNGVAFAPVVFHDG 120 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 QG ++ + GI + L +ICV +GTTTE L D F+A + Y P+ ++ + ++ A Y Sbjct: 121 QGLLVRRDSGIKRLEDLRNQTICVGSGTTTEQNLNDVFQAKGIPYKPVKYQDLNQLVAGY 180 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 RC A T D S L + + ++P H ILP+++SK PLAP GD + + W Y Sbjct: 181 LQKRCAAMTSDRSQLASARSGFEQPGNHQILPEVLSKEPLAPLSSGGDQRLADAMRWVVY 240 Query: 247 AMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 A+VTAEE+GITQ N++ + D + ++RFLG++ +G LGL D+ +++ Sbjct: 241 ALVTAEEMGITQNNVDAKLQEAINDPSKTALRRFLGVE--GELGSKLGLPNDFVVSVLKA 298 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE+++R+LG QS + IPRG N L GG++ APP + Sbjct: 299 TGNYGEIYNRHLGPQSAVPIPRGLNQLHRDGGVLIAPPFQ 338 >gi|300022607|ref|YP_003755218.1| extracellular solute-binding protein family 3 [Hyphomicrobium denitrificans ATCC 51888] gi|299524428|gb|ADJ22897.1| extracellular solute-binding protein family 3 [Hyphomicrobium denitrificans ATCC 51888] Length = 344 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 143/338 (42%), Positives = 213/338 (63%), Gaps = 3/338 (0%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 ++I ++ F + AS++ I+KRG + CG++ GF+E+ +G WKGFDV+FC Sbjct: 10 LILAIGSMVGGFCGPAWSEASLIDTIRKRGHVVCGVSERAPGFSEISGSGTWKGFDVEFC 69 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 AL++A+ + +++L L ++F AL+ +ID+L T WTL R+ LG F Y+ Sbjct: 70 SALAAAVLGNKDSVKFLSLMPSDKFNALRDNEIDVLMGATSWTLTRDTELGARFVAALYY 129 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQGFI+ + ISSV +LSGASICV G+T +ADYF A M+Y I +R +E+ Sbjct: 130 DGQGFIVPRNHSISSVLELSGASICVLPGSTDASAVADYFGARRMRYQLITSDRWDELVK 189 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 Y + C TGD+S L + ++ ++LP+ ISK PL PA+ G W+ +V WT Sbjct: 190 TYSSGGCTVLTGDLSLLAYERSRLANGADQMLLPEYISKEPLGPAVKVGRDSWFAVVRWT 249 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 + A+V AEELGI N+ ++ K + + DV+RFLG++ +IG LGL +DW Y+++R +G Sbjct: 250 YMALVAAEELGINSSNV-EMMKVSPSHDVRRFLGLEA--DIGAPLGLARDWAYQVVRQVG 306 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NY E+FDR LG S LK+ RG N LW+KGGLMY+ P+R Sbjct: 307 NYAEIFDRTLGQGSALKLDRGLNNLWTKGGLMYSVPMR 344 >gi|78184422|ref|YP_376857.1| extracellular solute-binding protein [Synechococcus sp. CC9902] gi|78168716|gb|ABB25813.1| extracellular solute-binding protein, family 3 [Synechococcus sp. CC9902] Length = 367 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 140/348 (40%), Positives = 206/348 (59%), Gaps = 11/348 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + ++ L+ L + + L ++ RG L CG++ + GF+ + G + GF Sbjct: 21 RRLIGAVGGLVGLISGCATLSDGTSSRLDLVQSRGELLCGVSGKIPGFSFLSPEGRYAGF 80 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLA 117 DVD C+A+++A D +K+QY PL A ERF AL+S +ID+LSRNT TL R+ + GL+ Sbjct: 81 DVDICKAMAAAFVGDSAKVQYRPLTAPERFTALRSGEIDLLSRNTTHTLSRDAAGGNGLS 140 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F P + DGQG ++ G+ S++ LSG +ICV +GTTTE L D F A + Y PI ++ Sbjct: 141 FAPTVFHDGQGLMVSVGSGVRSIADLSGKAICVGSGTTTEQNLNDAFAAQGLPYTPIKYQ 200 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + ++ Y RC A T D S L + + P +HVIL D +SK PLAPA++ GD Sbjct: 201 DLNQVVGGYLQGRCAAMTSDRSQLASARSGFKDPQQHVILEDRLSKEPLAPAVVGGDQRM 260 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS----KDTTNPDVQRFLGIDKSSNIGEALGLTK 293 + +W YA++ AEE GITQ N++ V D + ++RFLG+D +G LGL Sbjct: 261 ADATNWVVYALIEAEERGITQANLDDVLERAVADPSQAALRRFLGVD--GGLGAKLGLPD 318 Query: 294 DWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 D+ ++IR GNYGE+++R+LG S + IPRG N L +GGLM APP Sbjct: 319 DFVVQVIRATGNYGEIYNRHLGPGSAVTIPRGPNRLGVEGGLMIAPPF 366 >gi|302383029|ref|YP_003818852.1| extracellular solute-binding protein family 3 [Brevundimonas subvibrioides ATCC 15264] gi|302193657|gb|ADL01229.1| extracellular solute-binding protein family 3 [Brevundimonas subvibrioides ATCC 15264] Length = 370 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 144/321 (44%), Positives = 212/321 (66%), Gaps = 4/321 (1%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L IK+RG L CG+N GLVGFA G+W+GFDVDFCR L++A+ DP ++++PL Sbjct: 52 SPTLVAIKRRGRLNCGVNQGLVGFAYTDNRGEWRGFDVDFCRGLAAAVVGDPDAVRFVPL 111 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 +A+ RF AL+ ++D+L RNT WT+ R+ L+F I Y+DGQGF++ + ++S ++L Sbjct: 112 SAENRFQALEDGRVDVLWRNTSWTMERDTGGRLSFAGINYYDGQGFLVRRALNLNSAAEL 171 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +GA IC+Q+G+T+ L + DYF++ ++Y +V E AY CDA++ D+SAL A Sbjct: 172 NGARICLQSGSTSALNVEDYFRSRGIEYRAVVLPTEEAARQAYGREDCDAFSADVSALAA 231 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + T S+HVILPD+ISK PL P + +GD +W IV WT A+V AEELG+TQ N+ Sbjct: 232 ARTTLGDSSQHVILPDVISKEPLGPVVRRGDEQWTAIVRWTQNALVLAEELGVTQANVED 291 Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 + + +P V+R LG++ G +GL+ DW I +GNYGE+F+RNLG+QS L + Sbjct: 292 QAAEARDPQVRRLLGVE--GEFGSRMGLSDDWARDAIAGVGNYGEIFERNLGSQSALDLA 349 Query: 324 RGYNALWS--KGGLMYAPPIR 342 RG NA W+ GL+Y P+R Sbjct: 350 RGLNAQWNGRPAGLIYGLPVR 370 >gi|56697221|ref|YP_167586.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ruegeria pomeroyi DSS-3] gi|56678958|gb|AAV95624.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ruegeria pomeroyi DSS-3] Length = 337 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 138/318 (43%), Positives = 206/318 (64%), Gaps = 4/318 (1%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L D++ G L CG++ G+ GF+ + G W G D D CRA+++A D + ++++PL Sbjct: 24 GKLDDVRAAGELACGVSEGVPGFSNPNSEGVWTGLDADICRAVAAATLGDANAVRFVPLA 83 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +K++ LA+ S Q+D+ SR T WT+ R+ + G+ F + Y+DGQGF++ G++S +L Sbjct: 84 SKQKVLAVSSGQVDMTSRTTTWTMKRDSAEGVDFTSVVYYDGQGFMVRADAGVTSARELD 143 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 A++C+ GTTTEL +AD+ +A+ + P+VFE E AY + RCDA T D S L A Sbjct: 144 AATVCLTTGTTTELNMADFARANGLTLEPVVFEGKREAVEAYASGRCDALTTDASQLAAF 203 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + PSEH ILP+IISK PLAP + GD +W +IV+W Y ++TAEELG+TQ N+ ++ Sbjct: 204 RAGFADPSEHKILPEIISKEPLAPFVAHGDNQWKDIVTWVVYGLITAEELGVTQANVAEM 263 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 + +TNP++QR LG S + G LGL W I +GNYGE++DRNL + L + R Sbjct: 264 TASSTNPNIQRLLGT--SGDTGGFLGLNSTWMVDTISAVGNYGEIYDRNL--TATLGLER 319 Query: 325 GYNALWSKGGLMYAPPIR 342 G NALW+ GG++YA P+R Sbjct: 320 GVNALWTDGGILYAMPVR 337 >gi|88808790|ref|ZP_01124300.1| ABC transporter for amino acids, substrate binding protein [Synechococcus sp. WH 7805] gi|88787778|gb|EAR18935.1| ABC transporter for amino acids, substrate binding protein [Synechococcus sp. WH 7805] Length = 338 Score = 306 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 133/340 (39%), Positives = 207/340 (60%), Gaps = 8/340 (2%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L + T AS L I++RG L+CG++ + GF+ ++ +G + G DVD C+A + Sbjct: 1 MLFGLYACATLGEGGASRLDLIRQRGELRCGVSGKIPGFSFLERDGRYAGLDVDMCQAFA 60 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLAFRPITYFDG 126 +A D SK++Y PL A ERF AL++ +ID+LSRNT + L R+ S G+ F P+ + DG Sbjct: 61 AAFVGDSSKVEYRPLTAPERFTALRTGEIDLLSRNTTFNLSRDASGGNGVTFAPVVFHDG 120 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 QG ++ + GI + L +ICV +GTTTE L D F+A + Y P+ ++ + ++ A Y Sbjct: 121 QGLLVRRNSGIKGLDDLRDKTICVGSGTTTEQNLNDVFQARGIAYKPVKYQDLNQLVAGY 180 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 RC A T D S L + + +P+ H ILP+++SK PLAP GD + + W Y Sbjct: 181 LQGRCSAMTSDRSQLASARSGFAQPNNHQILPEVLSKEPLAPLSSGGDQRLADAMRWVVY 240 Query: 247 AMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 A++TAEE+GIT+ N++ + + D + ++RFLG+D +G LGL D+ +++ Sbjct: 241 ALITAEEMGITKANVDVKLQEATSDPSKTALRRFLGVD--GELGSKLGLRNDFVVSVLKT 298 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYGE++DR+LG QS + IPRG N L GG++ APP + Sbjct: 299 TGNYGEIYDRHLGPQSAVPIPRGLNQLHRDGGVLIAPPFQ 338 >gi|296536584|ref|ZP_06898665.1| ABC superfamily ATP binding cassette transporter, amino acid binding protein [Roseomonas cervicalis ATCC 49957] gi|296263094|gb|EFH09638.1| ABC superfamily ATP binding cassette transporter, amino acid binding protein [Roseomonas cervicalis ATCC 49957] Length = 323 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 154/326 (47%), Positives = 220/326 (67%), Gaps = 7/326 (2%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + A LG I+ RG + CG+ +GFA + G ++G D D+CRAL+ A+F D K Sbjct: 4 ATAQPAADTLGAIRARGHVLCGVTPNTIGFAAPDSQGVFRGLDADYCRALAVAVFGDADK 63 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +++P A +RF ALQS ++D+L R T WTL RE +LG F + ++DG GF++ + G+ Sbjct: 64 ARFVPTTAPQRFPALQSGEVDVLIRTTTWTLSREAALGFVFAGVNFYDGNGFMVRRALGV 123 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S QL GAS+C+Q G+TTEL + DYF+AH M+ +P+ +E VEEI A+ A RCD Y+ D Sbjct: 124 QSARQLDGASVCLQQGSTTELNVTDYFRAHGMRLNPVTYENVEEIRTAFAAGRCDVYSSD 183 Query: 198 ISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 S L A + + V+LP+IISK PL PA+ +GD W++IV WTH+A++TAEELGI Sbjct: 184 TSTLAAFRAGQGAAADQFVLLPEIISKEPLGPAVRKGDARWFDIVRWTHFALLTAEELGI 243 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 TQ N+ + D+T+PDVQRFLG +S ++G LGL DW RI+ +GN+GEM++RN+ Sbjct: 244 TQANLARF-ADSTSPDVQRFLG--RSGDLGRMLGLQPDWAARIVGQLGNFGEMWERNI-- 298 Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342 + + I RG NALW++GGL YAPP+R Sbjct: 299 -TPMGIQRGINALWTQGGLQYAPPMR 323 >gi|119510485|ref|ZP_01629618.1| extracellular solute-binding protein, family 3 [Nodularia spumigena CCY9414] gi|119464907|gb|EAW45811.1| extracellular solute-binding protein, family 3 [Nodularia spumigena CCY9414] Length = 358 Score = 305 bits (780), Expect = 8e-81, Method: Composition-based stats. Identities = 151/358 (42%), Positives = 226/358 (63%), Gaps = 19/358 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI----------------LGDIKKRGFLKCGINTGL 44 M + + + +I T+ + IK RG L CG++ + Sbjct: 4 MRRSALILAIAPLIFAITACNNPGETTNTNNPNPGTQTTRNRWDAIKSRGQLICGVSGQI 63 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 GF+ V+ +G + G DVD CRA+++A+FD+P +++ L+A+ERF ALQ+ +ID+LSRNT Sbjct: 64 PGFSFVETDGKYSGIDVDICRAIAAALFDNPDAVEFRNLSAQERFTALQTGEIDVLSRNT 123 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 WTL R ++GL F P+ ++DGQ ++ K +GI+S++ + +ICVQ+GTTTE LAD Sbjct: 124 SWTLSRATAMGLEFAPVVFYDGQAIMVGKNRGINSLADMKDKAICVQSGTTTEQNLADQM 183 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + N+ Y PIVFE V A Y RCD T D SAL + ++T P +VIL ++IS Sbjct: 184 RKRNITYKPIVFEDVNVTFATYAEGRCDGITADRSALVSRRITLPNPENNVILDEVISSE 243 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284 PLAPA+ +GD+ + V+W Y+++ AEELGI +N+ Q + +PD++RFLG + N Sbjct: 244 PLAPAVAKGDSVLGSAVTWVVYSLIKAEELGINSQNLGQF-ATSNDPDIKRFLGTE--GN 300 Query: 285 IGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GE LGLT D+ RI++H+GNYGE++DRNLG ++ L +PRG N L +GGL+YAPP R Sbjct: 301 LGEGLGLTNDFAARIVKHVGNYGEIYDRNLGPKTNLNLPRGQNQLGQQGGLLYAPPFR 358 >gi|33240126|ref|NP_875068.1| amino acid ABC transporter periplasmic protein [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237653|gb|AAP99720.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 350 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 140/351 (39%), Positives = 217/351 (61%), Gaps = 12/351 (3%) Query: 1 MY-KDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K FF ++ L IL ST NAS L IKKR L CG++ + GF+ ++ +G + Sbjct: 1 MKIKRFFSGMMTLSILLTGCASTGERNASRLQLIKKRNSLICGVSGKIPGFSFLETDGTY 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--L 114 +G D+D C+A ++A D ++QY PL A ERF A+++ +ID+LSRNT + L R+ Sbjct: 61 QGLDIDICKAFAAAFIGDSKRVQYRPLTAAERFTAVRTGEIDLLSRNTTFNLSRDSIGGN 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 GL F P+ + DGQG ++ + I+++ L+ SICV +GTTTE + D F+A ++ Y PI Sbjct: 121 GLTFAPVIFHDGQGLMVKRNSRINTIESLANKSICVGSGTTTEQNINDAFEAISLPYTPI 180 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 ++ + ++ A Y RC A T D S L A + +P +H+IL DI+SK PLAPA GD Sbjct: 181 KYQDLNQVVAGYLQGRCSAMTSDRSQLAAARSGFPKPEDHIILNDILSKEPLAPASSGGD 240 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN----PDVQRFLGIDKSSNIGEALG 290 + + + W +++++AEE GIT+ NI + + N ++RFLG++ ++GE +G Sbjct: 241 QKLSDAMRWVIFSLISAEEQGITKGNIKEKLQIAQNNPQMKSLRRFLGVE--GDLGEKIG 298 Query: 291 LTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 L D+ ++I GNYGE+++R+LG SE+ IPRG N L++KGG+ APP Sbjct: 299 LANDFVVKVISSTGNYGEIYNRHLGINSEVPIPRGLNKLYNKGGVQIAPPF 349 >gi|33863169|ref|NP_894729.1| ABC transporter for amino acids, substrate binding protein [Prochlorococcus marinus str. MIT 9313] gi|33635086|emb|CAE21072.1| ABC transporter for amino acids, substrate binding protein [Prochlorococcus marinus str. MIT 9313] Length = 349 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 136/350 (38%), Positives = 204/350 (58%), Gaps = 11/350 (3%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + ++ L +L S S L I KRG L CG++ + GF+ + NG ++ Sbjct: 1 MMRRLTTGLVTLSLLATGCASIDQGGGSRLELISKRGQLNCGVSGKIPGFSFLLGNGRYE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI--SLG 115 G DVD CRA+++A D +K+QY PL A ERF AL++ +ID+LSRNT L R+ G Sbjct: 61 GLDVDICRAMAAAFIGDATKVQYRPLTAPERFTALKTGEIDLLSRNTTLNLSRDAAGGNG 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 L F P+ + DGQG ++ + GI + L ++ICV +GTTTE L D F+ + Y PI Sbjct: 121 LTFAPVVFHDGQGLMVKRSSGIKGLQDLKASNICVGSGTTTEQNLNDAFQERKLSYTPIK 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + ++ A Y RC A T D S L A + P +H+IL ++SK PLAPA + GD Sbjct: 181 YQDLNQVVAGYLQGRCLAMTSDRSQLAAARSGFPDPEQHIILDVVLSKEPLAPASVGGDQ 240 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSK----DTTNPDVQRFLGIDKSSNIGEALGL 291 + + W +A+ AEE GITQ+N++ + + ++RFLG+D +G+ LGL Sbjct: 241 RLGDAIRWVVFALFAAEEFGITQENVDSKLEQAQTNPQMSSLRRFLGVDA--GLGQKLGL 298 Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 D+ ++IR GNYGE+++R+LG S + IPRG N + +GGL+ APP Sbjct: 299 VDDFVVKVIRATGNYGEIYNRHLGPNSSVPIPRGRNRSYRQGGLLIAPPF 348 >gi|254417720|ref|ZP_05031444.1| hypothetical protein BBAL3_30 [Brevundimonas sp. BAL3] gi|196183897|gb|EDX78873.1| hypothetical protein BBAL3_30 [Brevundimonas sp. BAL3] Length = 356 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 139/322 (43%), Positives = 203/322 (63%), Gaps = 4/322 (1%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 ++ L +K+RG L CG++ GLVGFA G W+GFD DFCRA+++AIF D + ++++P Sbjct: 37 DSPTLIAVKRRGRLNCGVHQGLVGFAYTDNRGQWRGFDADFCRAMAAAIFGDGNAVRFVP 96 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L+A +RF AL+ ++D+L RN+ WT+ R+ G F I Y+DGQGF++ + ++S ++ Sbjct: 97 LSASDRFAALKEGRVDVLWRNSSWTMSRDAGEGFVFAGINYYDGQGFLVRRSLSLASATE 156 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+GA ICVQAG+T + D+F++ + Y P+V E AY CDA + DISAL Sbjct: 157 LNGARICVQAGSTAQANADDFFRSRGIAYRPVVLPSEEAARDAYGREDCDALSADISALA 216 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 A + H IL D++SK PL P + GD W ++V WT A+V AEE G+TQ+N Sbjct: 217 AARTVLADSQAHTILSDVVSKEPLGPVVRAGDERWADVVRWTLNAVVLAEEFGVTQENAE 276 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 +SK + +P ++R LG + G LGL+ DW I +GNYG++FDRNLG+QS L + Sbjct: 277 ALSKTSNDPRIKRLLGSE--GEYGALLGLSDDWAKDAILSVGNYGQIFDRNLGSQSPLDL 334 Query: 323 PRGYNALWSK--GGLMYAPPIR 342 RG NA W+ GL+Y PIR Sbjct: 335 ARGLNAQWNARPAGLIYGLPIR 356 >gi|237807991|ref|YP_002892431.1| extracellular solute-binding protein family 3 [Tolumonas auensis DSM 9187] gi|237500252|gb|ACQ92845.1| extracellular solute-binding protein family 3 [Tolumonas auensis DSM 9187] Length = 342 Score = 302 bits (774), Expect = 5e-80, Method: Composition-based stats. Identities = 159/345 (46%), Positives = 234/345 (67%), Gaps = 6/345 (1%) Query: 1 MYK-DFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + + + L + + + L ++KK+G+++CG+N GL GF+ A G W+ Sbjct: 1 MSKLKYLTGVASAVALLVAGNAQAASGDTLANVKKKGYVQCGVNDGLPGFSSPNAKGAWE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DVD CRA+++A+F D SK++Y+PL KERF ALQS ++DILSRNT WT+ R+ +LGL Sbjct: 61 GMDVDVCRAVAAAVFADASKVKYIPLGGKERFTALQSGEVDILSRNTTWTMTRDATLGLK 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 TY+DGQGF+++K G+ S +L GA+IC + GTTTE+ +ADYF A+ MKY P+VF+ Sbjct: 121 STATTYYDGQGFMVNKSLGVKSAKELDGATICTEGGTTTEMNMADYFNANKMKYTPVVFD 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 ++ + + RCD T D S L+A+++ +P + +LP+IISK PL P + QGD W Sbjct: 181 NSDQTVKGFESGRCDVLTSDKSQLFAVRVKLAKPDDVAVLPEIISKEPLGPMVRQGDESW 240 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 +V WT +AM+ AEELG++ KN+++++K + +PDV+R LG D G LG KDW Y Sbjct: 241 ELLVKWTVFAMINAEELGVSSKNVDEMAK-SGSPDVKRMLGYDAPD--GTTLGAVKDWGY 297 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +I++ +GNY E+FDRN+G S LKI R N LW+KGG +YAPP+R Sbjct: 298 QIVKQVGNYAEVFDRNVGKDSPLKIVRTENNLWNKGGFLYAPPVR 342 >gi|116070918|ref|ZP_01468187.1| extracellular solute-binding protein, family 3 [Synechococcus sp. BL107] gi|116066323|gb|EAU72080.1| extracellular solute-binding protein, family 3 [Synechococcus sp. BL107] Length = 371 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 141/354 (39%), Positives = 205/354 (57%), Gaps = 15/354 (4%) Query: 1 MYK----DFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKAN 53 M++ ++ LI L + L ++ RG L CG++ + GF+ + + Sbjct: 19 MFRPISSRLIGAVGGLIGLLCGCATLGDGTDSRLNLVQTRGELLCGVSGKIPGFSFLSPD 78 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G + G DVD C+A+++A D +K+QY PL A ERF AL+S +ID+LSRNT TL R+ + Sbjct: 79 GRYAGLDVDVCKAMAAAFVGDSTKVQYRPLTAPERFTALRSGEIDLLSRNTTHTLSRDAA 138 Query: 114 --LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 GL+F P + DGQG ++ G S++ LSG +ICV +GTTTE L D F A + Y Sbjct: 139 GGNGLSFAPTVFHDGQGLMVSVGSGARSMADLSGKAICVGSGTTTEQNLNDAFAAQGLPY 198 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 PI ++ + ++ Y RC A T D S L + + P +HVIL D +SK PLAPA++ Sbjct: 199 TPIKYQDLNQVVGGYLQGRCAAMTSDRSQLASARSGFKDPQQHVILEDRLSKEPLAPAVV 258 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS----KDTTNPDVQRFLGIDKSSNIGE 287 GD + +W YA++ AEE GITQ N++ V D + ++RFLG+D +G Sbjct: 259 GGDQRMADATNWVVYALIEAEERGITQANLDDVLERAVADPSQAALRRFLGVD--GGLGA 316 Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 LGL D+ ++IR GNYGE+++R+LG S + IPRG N L GGLM APP Sbjct: 317 KLGLPDDFVVQVIRATGNYGEIYNRHLGPGSAVTIPRGPNRLGRDGGLMIAPPF 370 >gi|163793102|ref|ZP_02187078.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [alpha proteobacterium BAL199] gi|159181748|gb|EDP66260.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [alpha proteobacterium BAL199] Length = 346 Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats. Identities = 137/325 (42%), Positives = 200/325 (61%), Gaps = 4/325 (1%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 S S L +K RG L+C + T G+ + G W GFD + CRA+S+AIF DP KI+ Sbjct: 24 ASAQQSTLDIVKSRGHLRCQLGTPAPGWYMLSDTGKWSGFDYENCRAVSAAIFGDPDKIE 83 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + + RF A+ + + D+LSR T WTL RE LGL F ++++DGQGF++ K GI S Sbjct: 84 VQSVTSAVRFTAMANGESDMLSRTTTWTLFRETQLGLDFTTVSFYDGQGFMVLKDAGIKS 143 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 +L GA++CV GTTTEL L DY + + + P+VFE D + CDA T D S Sbjct: 144 ALELKGATVCVATGTTTELNLTDYSRTNGLDIKPVVFEDSNVRDNTFFTGGCDAITNDKS 203 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 +L + + S ILP+ ISK PL P + Q D++W +IV W+ Y M+ AEE G++ Sbjct: 204 SLASTRAKAPDVSIFKILPETISKEPLGPVVRQNDSQWKDIVQWSVYTMIAAEEYGMSST 263 Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319 N+++V +TTNP+++R LG + ++ + LGL W Y II+ +GNYGE ++ +G ++ Sbjct: 264 NVDKVLAETTNPEIKRMLGAE--GDLNKGLGLEPKWAYNIIKMVGNYGENYEEFMGEKTV 321 Query: 320 LKIPR--GYNALWSKGGLMYAPPIR 342 + IPR NALW+KGGL+Y+PP R Sbjct: 322 MNIPRDGSPNALWTKGGLLYSPPFR 346 >gi|116072941|ref|ZP_01470203.1| ABC transporter for amino acids, substrate binding protein [Synechococcus sp. RS9916] gi|116068246|gb|EAU73998.1| ABC transporter for amino acids, substrate binding protein [Synechococcus sp. RS9916] Length = 349 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 138/351 (39%), Positives = 205/351 (58%), Gaps = 11/351 (3%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M+ +L +++ + AS LG I++R L+CG++ + GF+ ++ NG + Sbjct: 1 MHFRTLSGLLAGVLMLQGCATLGEGGASRLGLIQQRKSLRCGVSGKIPGFSFLRPNGSYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LG 115 G DVD C+A ++A D + ++Y PL A ERF AL++ +ID+LSRNT + L R+ + G Sbjct: 61 GLDVDLCKAFAAAFVGDATAVEYRPLTAPERFTALRTGEIDLLSRNTTFNLSRDAAGGNG 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 ++F P+ + DGQG I+ K GI ++ L SICV +GTTTE L D +A + Y PI Sbjct: 121 VSFAPVVFHDGQGLIVKKTSGIRQLTDLRNQSICVGSGTTTEQNLNDALEAQGIAYTPIK 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + ++ A Y RC A T D S L A + P EHVIL ++SK PLAP + GD Sbjct: 181 YQDLNQVVAGYLQDRCSAMTSDRSQLAAARSGFANPQEHVILNAVLSKEPLAPLSVGGDQ 240 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN----PDVQRFLGIDKSSNIGEALGL 291 + + W YA++TAEELG+TQ N+ + N ++RFLG+D +G LGL Sbjct: 241 RLGDAMRWVVYALITAEELGLTQANVQERLAKAQNNPQMTQLRRFLGVD--GELGTKLGL 298 Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 D+ R+I GNYGE+++R+LG S + IPRG N L GG M APP + Sbjct: 299 APDFVVRVIEATGNYGEIYNRHLGPDSAVPIPRGLNQLHRDGGAMTAPPFQ 349 >gi|309791547|ref|ZP_07686046.1| extracellular solute-binding protein [Oscillochloris trichoides DG6] gi|308226407|gb|EFO80136.1| extracellular solute-binding protein [Oscillochloris trichoides DG6] Length = 404 Score = 299 bits (765), Expect = 5e-79, Method: Composition-based stats. Identities = 131/338 (38%), Positives = 204/338 (60%), Gaps = 9/338 (2%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSS 69 ++ T ++ +L +K RG L CG N L GF G W GFDVDFCRAL++ Sbjct: 70 LTVVAEATPTPASSGLLERVKARGKLICGTNADLPGFGFYDNVRGRWSGFDVDFCRALAA 129 Query: 70 AIFDDPSKIQYLPLN---AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 AIF D ++++ LN ERF +++S ++D+L RNT WTL R+ LAF P T+ DG Sbjct: 130 AIFADADAVEFVALNTSGQNERFESVRSGKVDVLFRNTTWTLGRD-LSQLAFGPTTFHDG 188 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 Q F++ I+S++ L+G ICV GTT+ L+D F A + + ++++ ++ AY Sbjct: 189 QTFMVRTASQITSLNDLAGKKICVSRGTTSAQNLSDDFAARGIVFEQVLYDDENQLYPAY 248 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 CDA T D S L + + T +RP +H IL + IS+ PL PA I+ D +W ++V+W + Sbjct: 249 DQGACDAVTSDSSQLASKRQTLERPEDHTILGERISREPLGPAFIEHDEQWRDVVTWVVF 308 Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306 A + AEEL + Q N+ Q+ ++T+P V+R LG++ + G +LGL D+ Y+IIR +GNY Sbjct: 309 ATMYAEELRVDQTNVEQMKANSTDPRVRRLLGLE--GDFGTSLGLNNDFGYQIIRLVGNY 366 Query: 307 GEMFDRNLGNQSELKIPRGYNALWS--KGGLMYAPPIR 342 ++++RNLG + + RG N W+ GG++ +PP R Sbjct: 367 ADIYNRNLGPTTPFAMDRGPNKAWNLGAGGVLASPPFR 404 >gi|254469135|ref|ZP_05082540.1| glutamate/glutamine/aspartate/asparagine-binding protein [Pseudovibrio sp. JE062] gi|211960970|gb|EEA96165.1| glutamate/glutamine/aspartate/asparagine-binding protein [Pseudovibrio sp. JE062] Length = 678 Score = 299 bits (765), Expect = 5e-79, Method: Composition-based stats. Identities = 133/318 (41%), Positives = 196/318 (61%), Gaps = 2/318 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + + +A L D+++RG L+C ++TGL GF+ NG W+GFD Sbjct: 1 MKKMILPVALGAAFAATSLSAASAGTLEDVQERGKLRCAVSTGLAGFSYTDENGKWQGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+CRA+++A+ D +++ P K RF AL S ++DILSRNT WT R+ L F Sbjct: 61 VDYCRAVAAAVLGDADAVEFSPTTGKTRFTALASGEVDILSRNTTWTFSRDADLKFTFLG 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ++Y+DGQGF++ K G++S +L GA++C+Q GTTTEL L+DYF A M Y P+ E Sbjct: 121 VSYYDGQGFMVKKSLGVASAKELDGATVCIQTGTTTELNLSDYFTAEGMSYEPLSIETNT 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A Y A CD YT D S L A + T + +H++LP+IISK PL P + GD +W +I Sbjct: 181 EGRANYLADACDVYTTDASGLAASRATFENADDHIVLPEIISKEPLGPLVRHGDDQWADI 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 W A+ AEE GIT N ++++ ++ +P+V R LG S +G ++GL D+ I Sbjct: 241 GRWVLNALKIAEEKGITAANADEMAANSKDPEVLRLLGA--SGEMGASVGLGNDFALVAI 298 Query: 301 RHMGNYGEMFDRNLGNQS 318 + +GNYGE+F+R+LG Q+ Sbjct: 299 KAVGNYGEVFERHLGTQT 316 >gi|317407537|gb|EFV87488.1| extracellular solute-binding protein, family 3 [Achromobacter xylosoxidans C54] Length = 329 Score = 295 bits (755), Expect = 7e-78, Method: Composition-based stats. Identities = 123/331 (37%), Positives = 192/331 (58%), Gaps = 5/331 (1%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 + TN+ + I+ RG++ CG G GF+ +G+WKG DVD CRA++ A+ Sbjct: 2 ASPVAAAVTQTNSPTVDQIRARGYVICGSGHGTTGFSAPDKDGNWKGLDVDTCRAIAIAV 61 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 D SK +++PL ++R ALQ+ QID+L R T WTL R+ + G+ F Y++ F++ Sbjct: 62 LGDASKTRFVPLTGQQRLTALQTGQIDVLPRTTSWTLRRDAN-GINFTYPNYYEYDAFMV 120 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 K GI+ ++GA+ICVQ G+T E+T+AD + + ++F+ V A+ + RC Sbjct: 121 RKDLGITQTKDMNGATICVQTGSTNEVTVADLSRKFKLGLKTVLFDNVAASRQAFFSGRC 180 Query: 192 DAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 D D SAL A++ P ++VI P L P++ GD W++IV W + Sbjct: 181 DGLITDASALAAVRATQAQNPDDYVIFPASGHSEALTPSVRHGDDRWFDIVKWVIQVPIA 240 Query: 251 AEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMF 310 AE++GITQ N++ + K + +P + RFLG + G+ALGL + W Y I++ +GNYGE+F Sbjct: 241 AEDMGITQANVDDMLK-SDDPRIARFLGKEP--GNGKALGLDERWAYNIVKQLGNYGEIF 297 Query: 311 DRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 +RN+G S +K+ RG N L+ GGLMY Sbjct: 298 ERNVGKNSPMKLERGMNRLYRDGGLMYPYVF 328 >gi|150397299|ref|YP_001327766.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150028814|gb|ABR60931.1| extracellular solute-binding protein family 3 [Sinorhizobium medicae WSM419] Length = 343 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 117/343 (34%), Positives = 194/343 (56%), Gaps = 7/343 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M ++ L T+ +AS+L +K+RG L CG + GF + G +G Sbjct: 1 MKLIKLLTAGVFAGLAVTTGQASASVLDTVKQRGTLNCGTDNTAPGFGYLNTTTGQMEGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVDFCRA+++A+ D SK++++ + K RF A+ + Q+D++ +T RE S+ + F Sbjct: 61 DVDFCRAVAAAVLGDASKVKFVTVTDKSRFDAVLTNQVDVVFAHTTMKPARESSIAIDFL 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK-YHPIVFER 178 P+ ++DG G ++ + + L GA+ C G+ TE L FKA+ + + +E Sbjct: 121 PVNFYDGTGIMVKTDSEVVQFADLEGATFCTTQGSVTETVLTSAFKANGWQGSKVLTYEN 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E++ AA + RC+A + D SAL A + +PS+++ILP+ + KSP A + D++W Sbjct: 181 LEKLFAALNSGRCNAMSTDKSALAAWAGNSPKPSDYLILPETLDKSPFAGFVAANDSKWR 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 N + W Y + AEE ITQ N+ + K + +P VQ+FLG+ G+ GL D+ + Sbjct: 241 NALRWITYGLFQAEESDITQANLEEKLK-SDDPFVQKFLGV--GGGYGKDFGLPDDFVAQ 297 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPR--GYNALWSKGGLMYAP 339 I+ MGNYGE++ RNLG + + + R NALW++GG +Y+P Sbjct: 298 AIKAMGNYGEIYARNLGPDTSMFLDRKGTPNALWTEGGAIYSP 340 >gi|190891654|ref|YP_001978196.1| putative amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] gi|190696933|gb|ACE91018.1| putative amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] Length = 343 Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats. Identities = 119/343 (34%), Positives = 198/343 (57%), Gaps = 7/343 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M F++ + FT+ + +AS+L +K+RG L CG + GF + G +G Sbjct: 1 MKLLKFLTAGVFAGVAFTAANASASVLDTVKQRGVLNCGTDNTAPGFGYLNTTTGQMEGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVDFC+A+++ + D SK++++ + K RF A+ + Q+D++ +T RE S+ + F Sbjct: 61 DVDFCKAVAAGVLGDASKVKFITVTDKSRFDAVLTGQVDVVFAHTTIKPARESSIAIDFL 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFER 178 PI ++DG G ++ GI + L GA+IC G+ TE LA FKA K + +E Sbjct: 121 PINFYDGTGLMVKTDAGIKEFADLDGATICTTQGSATETVLAAAFKARGWKDSKVLTYEN 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E++ +A + RC+A + D SAL A +P++++ILPD + KSP + D++W Sbjct: 181 LEKLFSALNSGRCNAMSTDKSALAAWAGNAPKPADYLILPDTLDKSPFGGFVAANDSKWR 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 N + W Y + AEE ITQ N+ + K + +P +Q+FLG+ G+ GL+ D+ + Sbjct: 241 NALRWIEYGLFQAEESEITQANLAEKLK-SEDPFIQKFLGV--GGGYGKDFGLSDDFIAQ 297 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPR--GYNALWSKGGLMYAP 339 I+ +GNYGE +DRNLG +++ + R NALW++GG +Y+P Sbjct: 298 AIKAVGNYGEAYDRNLGPTTKMYLDRKGTPNALWTQGGAIYSP 340 >gi|323136410|ref|ZP_08071492.1| extracellular solute-binding protein family 3 [Methylocystis sp. ATCC 49242] gi|322398484|gb|EFY01004.1| extracellular solute-binding protein family 3 [Methylocystis sp. ATCC 49242] Length = 345 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 153/346 (44%), Positives = 217/346 (62%), Gaps = 10/346 (2%) Query: 3 KDFFVSILCLIILFFTSFSTN------ASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 + FF+++ ++ + L +I KRGF+ CG+ GFAE +W Sbjct: 4 RRFFLAVALAVMCALAAAQDAEAQIEIGPTLSEILKRGFVICGMTEAD-GFAEPLDGNEW 62 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDVD CRAL+SAIFDDP+K+ Y L AKER +LQ +D+L+ WT R+ + Sbjct: 63 RGFDVDICRALASAIFDDPTKVMYSALPAKERAASLQGNWVDLLASGAPWTQSRDTGQRI 122 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + ++ +DGQ F++ +++ +S LSG S+CVQ GT+ ELTLAD+F Y P F Sbjct: 123 IYAGVSLYDGQTFLVRRQRSFASARDLSGVSVCVQRGTSYELTLADFFNVRKAPYEPRAF 182 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E EE A Y A +CDA T D S LYA + P++H +LPD++SK+P P + QGD + Sbjct: 183 ETFEEAAAGYEAGKCDALTADASMLYAARAKFASPADHAVLPDMLSKAPRGPVVRQGDDQ 242 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296 W NIV WT YAM+ AEEL ++ N + K + NPD++R +G+D ++G LGL K+W Sbjct: 243 WLNIVRWTLYAMINAEELQVSILNADLALK-SENPDIRRLVGVD--GDLGAGLGLAKNWA 299 Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +RII+H+GNYG+MFDRNLG + + + R NALWS GGLMYAPP+R Sbjct: 300 FRIIKHIGNYGDMFDRNLGPATPMAMDRRINALWSNGGLMYAPPVR 345 >gi|83591779|ref|YP_425531.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC 11170] gi|83574693|gb|ABC21244.1| extracellular solute-binding protein, family 3 [Rhodospirillum rubrum ATCC 11170] Length = 364 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 124/351 (35%), Positives = 190/351 (54%), Gaps = 17/351 (4%) Query: 6 FVSILCLIILFFTS-------------FSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 +L + + + L +++RG+L CG+N L G V Sbjct: 15 LAVVLAIGFALLSPLAGRAEQAPASPISAAEGDTLRQVRERGYLTCGVNARLTGLGSVDP 74 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 +G W+GFD+D+CRA+++A D +++++PL+ + R LAL S ++D+LSRNT WTL R+ Sbjct: 75 DGVWRGFDIDYCRAVAAAALGDSGRVRFVPLDIRSRLLALTSGEVDLLSRNTTWTLERDA 134 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKY 171 G++F ++ FDG G + K ++ L +CVQ+ T L A + + Sbjct: 135 GQGISFVGVSLFDGPGLLAWKDLPGDDLASLPPTARLCVQSAATAARVLPARMAAAGLSF 194 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAI 230 + F +EE A CD Y D +AL +L RP +LPD+++ PL PA+ Sbjct: 195 TILPFRSLEEARMALFTRACDGYVADRTALASLATFEAPRPDALRLLPDLLAVEPLGPAV 254 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALG 290 GD W++I WT +A++ AEE G++ + V + T +P+++RFLG+D +G LG Sbjct: 255 RDGDANWFDIARWTLFALIKAEEEGLSHDRLPAVLESTQDPELRRFLGLDP--GVGAPLG 312 Query: 291 LTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 L W RI+ +G YGE+FDRNLG S LK+ RG NAL GGLM APP Sbjct: 313 LDDAWVRRIVSQVGTYGEVFDRNLGQGSPLKLERGPNALRRDGGLMVAPPF 363 >gi|296536952|ref|ZP_06898974.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] gi|296262721|gb|EFH09324.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] Length = 338 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 137/344 (39%), Positives = 217/344 (63%), Gaps = 8/344 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + ++ + + S L ++ RG L CG++ GFA + G+ +G Sbjct: 1 MLRTMLSCLAATLLASAAAAQGSGSPTLDAVRARGQLACGVSGTNPGFALADSRGEMRGS 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + DFCRA+++A D +++++ L + RF ALQS +ID+L R W+L RE SLGL F Sbjct: 61 EADFCRAVAAATLGDAGRVKFVVLTSTNRFTALQSGEIDLLVRTATWSLGREASLGLLFA 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 IT+ DG F++H G+ S ++L GA+IC+ GTTTEL + DYF+ M++ P++ + V Sbjct: 121 GITFHDGTAFMVHAASGVRSAAELDGATICILPGTTTELAVTDYFRRGGMRFTPVLIDNV 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E+ AA+R+ RCD+Y+ D SAL + + ++ +LP++ISK PL P + +GD +W+ Sbjct: 181 TELRAAFRSGRCDSYSSDASALASFRFGEGAGAGQYALLPEVISKEPLGPLVRKGDDKWF 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 +IV WTH+AM+ AEELGI + + NPD++R LG+D ++G A+GL W + Sbjct: 241 DIVRWTHFAMLAAEELGIRGADAEAALA-SPNPDIRRLLGVD--GDLGRAMGLDNRWAFN 297 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 I+R +GNY E++DRN+ + L +PRG+N +W++GGL YAPPIR Sbjct: 298 ILRQVGNYAEVWDRNI---APLGVPRGHNRIWTQGGLQYAPPIR 338 >gi|301166613|emb|CBW26189.1| General L-amino acid substrate binding protein [Bacteriovorax marinus SJ] Length = 347 Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 142/342 (41%), Positives = 206/342 (60%), Gaps = 11/342 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L L L + AS + +IKKRG L CG++ GL GF+ G+WKGFD Sbjct: 17 MK--IIFTFLLLTSLSW------ASTISEIKKRGHLNCGVSEGLTGFSIPNEKGEWKGFD 68 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD C+A++ AIF+D K++++P + ERF +L KQIDILSRNT T RE++ + F P Sbjct: 69 VDICKAIAVAIFNDTQKVKFIPTSLGERFNSLAKKQIDILSRNTSRTFSREVTRDIEFAP 128 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + YFD QG ++ K+ I + L ICV+ TTT+ L DYFK HN++ + F+ + Sbjct: 129 VVYFDTQGILVSKRSKIKKIKDLDNKKICVKNNTTTQQNLIDYFKHHNLRLRQVRFDNND 188 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ + RC A T D++ L + K +L + I K PLAP I+ GD W N+ Sbjct: 189 QLVLGFLKKRCIALTSDVTTLISEKNHFQNSKSFTLLSERIEKEPLAPVILSGDRRWKNL 248 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V WT Y+++ AEELG++ NI + K + +P V+RF G + N + LG++ WT II Sbjct: 249 VDWTIYSLIWAEELGVSSSNIEAM-KTSADPRVKRFFG--EGFNFEKMLGVSNGWTGNII 305 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNY E+F RNLG S LKIPRG N+LW GG++Y+PP++ Sbjct: 306 SKIGNYSEVFHRNLGRDSNLKIPRGLNSLWKDGGILYSPPMK 347 >gi|87119292|ref|ZP_01075190.1| ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein [Marinomonas sp. MED121] gi|86165683|gb|EAQ66950.1| ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein [Marinomonas sp. MED121] Length = 344 Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 109/346 (31%), Positives = 174/346 (50%), Gaps = 11/346 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K L ++ S + S L + +RG L CG+ + + G W+ Sbjct: 5 KKTSLYLTLFILSFSTLSQAAQIIKPNSTLTQVIQRGDLNCGVFPDDPSRSAINLEGQWQ 64 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GF VDFCRA ++A+ D + Y+ + A RF L + D++ ++ WT RE L Sbjct: 65 GFYVDFCRATAAAVLKDQEFVNYIEVGATTRFSTLVELKTDVVMYSSTWTHSREFQYQLD 124 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + FDGQGFI+ I +++ L ++CV T+T L D ++ +K + Sbjct: 125 FPAVYLFDGQGFIVRAATNIQTINDLDNKTVCVTQNTSTHQNLVDLIESRELKTKILFSN 184 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 +R CDAYT D L + D+P + +LPD IS+ P+ P + D + Sbjct: 185 GDS----FFRGGPCDAYTADRMNLATNRANRTDKPENYRLLPDTISREPIGPMVRNDDAQ 240 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296 W I+ +A++ AEE I N++Q + N +VQ LG K IG+ LGL W Sbjct: 241 WSRIIRAVVHALILAEEKNINAANVDQALTQSKNAEVQNLLG--KKGEIGQQLGLDNQWA 298 Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 YR I+ +GNYGE+++R+ G+ S++ + RG N W++GG++YAP + Sbjct: 299 YRAIKAVGNYGEVYNRHFGSHSKIGVKRGINQPWNQGGILYAPIFK 344 >gi|261752067|ref|ZP_05995776.1| cationic amino acid ABC transporter [Brucella suis bv. 5 str. 513] gi|261741820|gb|EEY29746.1| cationic amino acid ABC transporter [Brucella suis bv. 5 str. 513] Length = 277 Score = 288 bits (738), Expect = 7e-76, Method: Composition-based stats. Identities = 154/273 (56%), Positives = 204/273 (74%), Gaps = 3/273 (1%) Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 F DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F I Y+DGQGF++ Sbjct: 6 FGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMI 65 Query: 132 --HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 K GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + Sbjct: 66 NSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEKIEEANAAYDSG 125 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W ++V WTH A++ Sbjct: 126 RCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRWTHNALL 185 Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW +II+ +GNYGE+ Sbjct: 186 NAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEI 244 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 245 FERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 277 >gi|87124569|ref|ZP_01080418.1| ABC transporter for amino acids, substrate binding protein [Synechococcus sp. RS9917] gi|86168141|gb|EAQ69399.1| ABC transporter for amino acids, substrate binding protein [Synechococcus sp. RS9917] Length = 343 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 133/333 (39%), Positives = 196/333 (58%), Gaps = 8/333 (2%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 T AS L I++RG L+CG++ + GF+ ++ +G + G DVD C+A ++A + Sbjct: 13 CATLGEGGASRLDLIRQRGSLRCGVSGKIPGFSYLQTDGRYFGLDVDLCKAFAAAFVPET 72 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLAFRPITYFDGQGFIMHK 133 + Y PL A ERF AL++ +ID+LSRNT L R+ + GL+F P+ + DGQG ++ Sbjct: 73 GAVDYRPLTAPERFTALRTGEIDLLSRNTTMNLSRDAAGGNGLSFAPVVFHDGQGLMVSS 132 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 GI + L G SICV +GTTTE L D F+A + Y PI ++ + ++ A Y RC A Sbjct: 133 GSGIKRLEDLQGKSICVGSGTTTEQNLNDAFEARGIAYTPIKYQDLNQVVAGYLQGRCQA 192 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 T D S L A + H IL +++SK PLAPA + GD + + W YA++TAEE Sbjct: 193 MTSDRSQLAAARSGFADQRNHRILEEVLSKEPLAPASVGGDQRLADAMRWVVYALITAEE 252 Query: 254 LGITQKNINQVSKDTTNP----DVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 LGITQ N+ + + ++RF G++ +GE LGL D+ ++I+ GNYGE+ Sbjct: 253 LGITQANVQERYAEAQRRPELTRLRRFFGLNA--GLGETLGLRDDFVVQVIQATGNYGEI 310 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + RNLG S++ IPRG N L GG+M APP + Sbjct: 311 YARNLGPDSQVPIPRGLNRLGRDGGVMVAPPFQ 343 >gi|209549223|ref|YP_002281140.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534979|gb|ACI54914.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 344 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 121/343 (35%), Positives = 198/343 (57%), Gaps = 6/343 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + + FT+ +ASIL +K+RG L CG + GF + G +G Sbjct: 1 MTLLKILIAGVFAGMAFTATHASASILDTVKQRGVLNCGTDNTAPGFGYLNTTTGQMEGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVDFC+A+++++ D +KI+++ + K RF A+ + Q+D++ +T RE S+ + F Sbjct: 61 DVDFCKAVAASVLGDAAKIKFITVTDKSRFDAVLTGQVDVVFAHTTIKPARESSIAIDFL 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFER 178 PI ++DG G ++ GI + L GA+IC G+ TE LA FKA K + +E Sbjct: 121 PINFYDGTGLMVKADAGIKEFADLDGATICTTQGSATETVLAAAFKARGWKDSKVLTYEN 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E+ +A + RC+A + D SAL A +P++++ILPD + KSP ++ D++W Sbjct: 181 LEKFFSALNSGRCNAMSTDKSALAAWAGNAPKPADYLILPDTLDKSPFGGFVVANDSKWR 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 N + W Y + AEE GITQ N+ + K + +P VQ+FLG + G+ GL+ D+ + Sbjct: 241 NALRWIEYGLFQAEESGITQANLAEKLK-SEDPFVQKFLGSNG-GGYGKDFGLSDDFIAQ 298 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPR--GYNALWSKGGLMYAP 339 I+ +GNYGE +DRNLG ++++ + R NALW++GG +Y+P Sbjct: 299 AIKAVGNYGEAYDRNLGPKTKMYLDRKGTPNALWTQGGAIYSP 341 >gi|260757721|ref|ZP_05870069.1| cationic amino acid ABC transporter [Brucella abortus bv. 4 str. 292] gi|260761546|ref|ZP_05873889.1| cationic amino acid ABC transporter [Brucella abortus bv. 2 str. 86/8/59] gi|260668039|gb|EEX54979.1| cationic amino acid ABC transporter [Brucella abortus bv. 4 str. 292] gi|260671978|gb|EEX58799.1| cationic amino acid ABC transporter [Brucella abortus bv. 2 str. 86/8/59] Length = 277 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 153/273 (56%), Positives = 203/273 (74%), Gaps = 3/273 (1%) Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 F DP+K+++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F I Y+DGQGF++ Sbjct: 6 FGDPTKVKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMI 65 Query: 132 --HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 K GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + Sbjct: 66 NSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEKIEEANAAYDSG 125 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 RCDAYT D S+LY ++L P +HVILP+IISK P + QGD W ++V WTH A++ Sbjct: 126 RCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRWTHNALL 185 Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 AEE GITQ N+ ++ K + NPD++R LG + + IG LGL KDW +II+ +GNYGE+ Sbjct: 186 NAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEI 244 Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 F+RN+G+ S LKI RG NA W+KGGL Y P+R Sbjct: 245 FERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 277 >gi|144898062|emb|CAM74926.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Magnetospirillum gryphiswaldense MSR-1] Length = 340 Score = 283 bits (723), Expect = 4e-74, Method: Composition-based stats. Identities = 121/346 (34%), Positives = 197/346 (56%), Gaps = 10/346 (2%) Query: 1 MYKDFFVSILC---LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++ L LI T A L ++ RG ++CG++ + NG W Sbjct: 1 MLKRIAIAALTALPLIAGLTTPPQARAGTLEEVTARGVIRCGVSEYGPALTAMNENGQWA 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GF DFCRA ++A + + ++ +++ +RF AL+ K +D+LS + WT R+ GLA Sbjct: 61 GFYTDFCRAFAAATLGNARAVDFVSVSSLDRFEALRQKAVDVLSEASTWTSERD-LGGLA 119 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + DGQGF++ + GIS + QL G ICV + T+ L K N+ + + Sbjct: 120 FPATSMMDGQGFLVRRDGGISGLDQLKGRRICVISHATSVGGLNRVNKVRNLGFKIQEYS 179 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ AA+ +CDA + D L +L+ P+++V+LP+ I++ PL+P +++ D Sbjct: 180 SIQGSFAAFFDRQCDAVSTDGIILASLRQQLAPNPADYVLLPERITREPLSPVVLKNDRR 239 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296 W +I+ WT A + AEELGIT N+ Q ++T+P+++R LG+D ++G LGL K W Sbjct: 240 WEDIIRWTILATIAAEELGITSANVKQHL-NSTDPEIRRLLGLD--GDMGARLGLDKAWA 296 Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 R+I +GNYGE+++RNL L + RG NAL S+GG++++PP R Sbjct: 297 MRVIEQVGNYGEIYNRNL--TKVLGLERGQNALSSQGGILWSPPFR 340 >gi|110347225|ref|YP_666043.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1] gi|110283336|gb|ABG61396.1| amino acid ABC transporter substrate-binding protein, PAAT family [Chelativorans sp. BNC1] Length = 340 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 117/344 (34%), Positives = 183/344 (53%), Gaps = 6/344 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + ++L SI +++RG++ CG + G+ G + G W GFD Sbjct: 1 MKRVTQFAAAAAMVLIGAGSVNAQSITDKVRQRGYVSCGASQGVPGLSRPDDKGVWTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD CRA+++A F D K Q++PLNA +R A+Q+ ++D+L+R T WT R++ + F Sbjct: 61 VDSCRAVAAAFFGDSQKAQFVPLNAAQRIPAVQTGEVDVLARTTTWTYTRDV--AVRFVA 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179 I DG ++ K + + + L G +IC+Q G + D + N K + F+ Sbjct: 119 INLVDGDAIMLRKSLNVGAAADLEGLTICLQGGGSLVENALDLIEQQNQVKVERVYFDST 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 AY RCD Y D A+ + P EH I + PLA AI +GD W+ Sbjct: 179 ILARDAYFGGRCDGYMSDGFAIAGQRAAVASNPDEHAIFQSGATTEPLALAIPRGDDRWF 238 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 +IV + AMV AE+ GIT KN+++++ T+ + ++ LG++ IGE L L W Y Sbjct: 239 DIVRYAFNAMVWAEDRGITSKNVDEIAASATDGETRKALGVEP--GIGEPLKLDDKWIYN 296 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +I+ +GNYGE+F RNLG +S LK R NAL GG+++ P + Sbjct: 297 VIKQVGNYGEVFARNLGEESPLKAERRLNALPRDGGILFPIPFK 340 >gi|319782291|ref|YP_004141767.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168179|gb|ADV11717.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 344 Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats. Identities = 119/339 (35%), Positives = 196/339 (57%), Gaps = 3/339 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKC-GINTGLVGFAEVKANGDWKGF 59 M L L+ + + L +K RG L C G + +GFAEV G+WKG Sbjct: 4 MKWGAAAMALGLVHFAAPAEAAGGKTLEAVKARGVLNCTGHDGSYLGFAEVDDKGNWKGM 63 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D CRA+++A+ DP+K++ +P++ +R+ +LQS +DI+ + + TL R+ LGL F Sbjct: 64 DIDLCRAVATAVLGDPAKLKVVPISWAQRWPSLQSGDVDIIIKASGGTLSRDTELGLQFS 123 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + HK+ + S+ +G +IC+ AGT+ E +A Y +K P++ E+ Sbjct: 124 MSYYLGTTKVMAHKELNLKSLKDAAGGTICIPAGTSQEQQVAAYTAKLGIKLEPVLIEKT 183 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 EE++ AY + RCD Y L ++ + +HVILPD+++ P + QGD W + Sbjct: 184 EELEQAYFSGRCDLYAQWGPTLAIARIAKSKVDDHVILPDVLAVEPEVMIMRQGDDNWVD 243 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 I +WT ++ AE+ GIT KN+++V T+P V +FLG+ + +G+ LGL DW Y++ Sbjct: 244 IANWTLSTLIFAEQEGITSKNVDEVKAKPTSPQVAKFLGV--TPGMGKGLGLDDDWAYKV 301 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYA 338 I+++GNYGE+F+R+LG S K+ R LW+ GG+++ Sbjct: 302 IKNVGNYGEIFERDLGKDSPYKMDRELTNLWNNGGVLFP 340 >gi|170690235|ref|ZP_02881402.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170144670|gb|EDT12831.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 345 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 136/339 (40%), Positives = 192/339 (56%), Gaps = 6/339 (1%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 L L + S + + L +K RG L+CG++ G+ GF+ A G W G DVDFC Sbjct: 12 LLGLWLSLASVPSISNAADGEALASVKTRGVLRCGVSEGVAGFSSQDAAGQWSGIDVDFC 71 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RAL++A D K+ ++PL A ERF AL++++ID+LSRNT WTLLRE +L F + ++ Sbjct: 72 RALAAAALGDSRKVAFVPLKASERFPALETRRIDVLSRNTTWTLLREGALKAQFAGVLFY 131 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 D Q F++ L GA++CVQ T+T L Y A P+V +E Sbjct: 132 DNQAFMVPAASASQLAGALKGATVCVQKDTSTLSHLIAYSDASGADIKPLVAGSADEARR 191 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSE-HVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A+ A RC AYT D S L AL L S+ ILP+ ISK PL P + GD W +V W Sbjct: 192 AFFAGRCAAYTADASYLAALLLHAPGGSQAFAILPERISKEPLGPVVRGGDQAWLTLVRW 251 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303 ++ AEE+ +T++N+ ++ + V R L D + + +G+ WT R + + Sbjct: 252 VLLTLIAAEEMDVTRENLEIRLRNPS---VSRALVPDDT--VTRTIGVEPGWTVRALESV 306 Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GNYG+MFDRN+G S L + RG N LW++GGLMYAPPIR Sbjct: 307 GNYGQMFDRNVGAHSPLGLARGTNDLWTRGGLMYAPPIR 345 >gi|103487895|ref|YP_617456.1| extracellular solute-binding protein [Sphingopyxis alaskensis RB2256] gi|98977972|gb|ABF54123.1| extracellular solute-binding protein, family 3 [Sphingopyxis alaskensis RB2256] Length = 365 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 124/324 (38%), Positives = 195/324 (60%), Gaps = 6/324 (1%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + S L I+ RG L C I+TG +G + + G W+GF VD+CRAL++A+ D K++ Sbjct: 47 AAAKGSTLARIRARGTLNCAIHTGQLGMSYLDKRGRWQGFFVDYCRALAAAVLGDARKVR 106 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++P+ + +RF +Q+ + D+LSR T WTL R+ LG+ F Y+DGQ F++ ++ G+ Sbjct: 107 FMPVASNKRFTIVQTGEADVLSRTTTWTLTRDTDLGVNFVGTMYYDGQSFLVPRRSGVRL 166 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI- 198 + L GASIC+ GTT+EL A+YF+ +++ +VFE EE A+ A RCDA T D Sbjct: 167 PTDLDGASICITKGTTSELNTAEYFERKGLRFLSVVFENPEEAKLAFFAGRCDAMTTDAF 226 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + P ++V+LP+ ++K P+ P + D +WY I W A+ AEE+G+T+ Sbjct: 227 TLTVIRLADTAHPDDYVVLPERLTKEPVGPVVRSDDEQWYEINKWVLNALFAAEEMGVTR 286 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 N ++ + +P+V++ LG G++LGL DW YR I GNYGE+FDR++ + Sbjct: 287 ANAARMRMASRDPEVRKMLG--GLPGFGKSLGLDDDWAYRAIEATGNYGEIFDRHI---T 341 Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342 L + RG N L+ GGL+Y P+R Sbjct: 342 PLGVERGQNKLYRDGGLIYPLPMR 365 >gi|260545549|ref|ZP_05821290.1| cationic amino acid ABC transporter [Brucella abortus NCTC 8038] gi|260096956|gb|EEW80831.1| cationic amino acid ABC transporter [Brucella abortus NCTC 8038] Length = 266 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 149/267 (55%), Positives = 198/267 (74%), Gaps = 3/267 (1%) Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM--HKKK 135 +++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F I Y+DGQGF++ K Sbjct: 1 MKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMINSKKLA 60 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 GI+S QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + RCDAYT Sbjct: 61 GINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEKIEEANAAYDSGRCDAYT 120 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D S+LY ++L P +HVILP+IISK P + QGD W ++V WTH A++ AEE G Sbjct: 121 TDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRWTHNALLNAEEYG 180 Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 ITQ N+ ++ K + NPD++R LG + + IG LGL KDW +II+ +GNYGE+F+RN+G Sbjct: 181 ITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEIFERNIG 239 Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342 + S LKI RG NA W+KGGL Y P+R Sbjct: 240 SGSPLKIARGLNAQWNKGGLQYGIPVR 266 >gi|186470673|ref|YP_001861991.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184196982|gb|ACC74945.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 345 Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 138/328 (42%), Positives = 200/328 (60%), Gaps = 7/328 (2%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + + + L IK RG L+CGI+ G+ GF+ G + G D DFCRA+++A+ DP Sbjct: 24 SAVATAAGSETLAHIKARGTLRCGISEGIAGFSAADGAGHFSGIDADFCRAVAAAVLGDP 83 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +K+ ++PL A RF AL++ +ID+L+RNT WTLLRE +LG+ F I ++D Q F++ +K Sbjct: 84 NKVTFVPLKASARFPALRTDRIDLLARNTTWTLLREGTLGIQFAGILFYDAQAFMVSRKN 143 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 G +S S L+GA++CVQ TT+E L Y A+++ P+V V E+ A+ + RC A T Sbjct: 144 GTASSS-LNGATVCVQQDTTSERNLMGYASANSLNVKPLVVGSVPELAQAFFSGRCSAAT 202 Query: 196 GDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D S L LK S ILP+ +SK PL PA+ D W +V W + ++TAEEL Sbjct: 203 ADASLLSVLKSRAPGGASTVEILPERLSKQPLGPAVRGDDDAWLVVVRWVLFTLITAEEL 262 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 G+T++N + +P V R L D + + LG+ WT R ++ GNYGEMF+RNL Sbjct: 263 GVTRENY---AARVRDPLVARALVPDAT--VTATLGIEPGWTLRALQSAGNYGEMFERNL 317 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G S L + RG N LW+ GGLMYAPP++ Sbjct: 318 GAGSPLGLERGLNNLWTHGGLMYAPPMQ 345 >gi|269964209|ref|ZP_06178500.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio harveyi 1DA3] gi|269831058|gb|EEZ85226.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio harveyi 1DA3] Length = 285 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 143/271 (52%), Positives = 190/271 (70%), Gaps = 3/271 (1%) Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 + +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F + Y+DGQGF++ Sbjct: 18 LGNKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMV 77 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 K G+SS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ + + A RC Sbjct: 78 KKDLGVSSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAAQTSKGFDAGRC 137 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 D T D S LYAL+L PS +LP+IISK PL P + QGD +W+NI WT +AMV A Sbjct: 138 DVLTTDQSGLYALRLNLKDPSSATVLPEIISKEPLGPVVRQGDDQWFNIAKWTLFAMVNA 197 Query: 252 EELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFD 311 EE GIT KN +++ K + +P+++R LG+D G+ LG+ DW Y++I+ +GNYGE F+ Sbjct: 198 EEYGITSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVIKQVGNYGESFE 254 Query: 312 RNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 R +G S LKI RG NALW+ GG MYAPPIR Sbjct: 255 RTVGTGSPLKISRGVNALWNAGGFMYAPPIR 285 >gi|148240911|ref|YP_001220412.1| general L-amino acid-binding periplasmic protein [Bradyrhizobium sp. BTAi1] gi|146411287|gb|ABQ39740.1| General L-amino acid-binding periplasmic protein [Bradyrhizobium sp. BTAi1] Length = 339 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 113/323 (34%), Positives = 184/323 (56%), Gaps = 7/323 (2%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + S++ IK+RG++ CG + G+ G + NG ++GFD D CR ++AI D KI+ Sbjct: 20 SAGAQSVVNKIKQRGYVSCGASQGVPGLSRPDENGYYRGFDSDMCRTFAAAILGDKDKIR 79 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++PLNA +RF ALQ+ +ID+LSR + TL R+ + F IT +D G ++ K I+ Sbjct: 80 FVPLNAGQRFPALQTGEIDVLSRTSTITLSRDTVVR--FVWITLYDTDGLLVRKADKITD 137 Query: 140 VSQLSGASICVQAGTT-TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 QL+G ++C+Q G + TE ++ + + + + + F+ + A+ RCD Y D Sbjct: 138 PKQLAGKTVCLQGGGSLTERSIEETEEEYGITMKKVYFDSTIQARDAFFGGRCDTYVTDG 197 Query: 199 SALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 +A + + P ++ I+ + P A+ +GD + ++I WT A++ AE GIT Sbjct: 198 TAAAGQRASVAKNPDDYDIIKVGHAAEPNGVAVARGDDQLFDITRWTINALLWAELHGIT 257 Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317 +NI++ K + + +++R LG + G+ LGL W Y +++ MGNY E++D NLG Sbjct: 258 ARNIDEKLK-SGSIEIKRVLGQEP--GFGKPLGLDDKWVYNVVKQMGNYAEIWDNNLGKS 314 Query: 318 SELKIPRGYNALWSKGGLMYAPP 340 S LKI RG NALW GGL Y P Sbjct: 315 SPLKIDRGLNALWKDGGLNYPYP 337 >gi|254707031|ref|ZP_05168859.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella pinnipedialis M163/99/10] Length = 251 Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 140/252 (55%), Positives = 186/252 (73%), Gaps = 3/252 (1%) Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM--HKKKGISSVSQLSGASICV 150 QS ++D+L RNT WT+ R+ SLGL F I Y+DGQGF++ K GI+S QLSGASICV Sbjct: 1 QSGEVDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMINSKKLAGINSALQLSGASICV 60 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 QAGTTTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + RCDAYT D S+LY ++L Sbjct: 61 QAGTTTELNMADYFRANKMEYNPVVFEKIEEANAAYDSGRCDAYTTDQSSLYGVRLALAN 120 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 P +HVILP+IISK P + QGD W ++V WTH A++ AEE GITQ N+ ++ K + N Sbjct: 121 PDDHVILPEIISKEPFGLTVRQGDARWADVVRWTHNALLNAEEYGITQANVEEMKK-SDN 179 Query: 271 PDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALW 330 PD++R LG + + IG LGL KDW +II+ +GNYGE+F+RN+G+ S LKI RG NA W Sbjct: 180 PDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEIFERNIGSGSPLKIARGLNAQW 239 Query: 331 SKGGLMYAPPIR 342 +KGGL Y P+R Sbjct: 240 NKGGLQYGIPVR 251 >gi|113478121|ref|YP_724182.1| Na-Ca exchanger/integrin-beta4 [Trichodesmium erythraeum IMS101] gi|110169169|gb|ABG53709.1| Na-Ca exchanger/integrin-beta4 [Trichodesmium erythraeum IMS101] Length = 3427 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 116/325 (35%), Positives = 174/325 (53%), Gaps = 13/325 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 +L IK+RG LK G+ GFA +NG+++GFDVD +A+++AIF DP K++ + Sbjct: 2867 DLLAKIKERGVLKLGLPDNEPGFAVKMSNGEYEGFDVDLGKAIAAAIFGDPEKLEVKTQS 2926 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 K+ F + +DI + L+R+ SLG+ F PI + GQG ++ GI+ + L+ Sbjct: 2927 FKDSFANTANGVVDISAMGITHNLVRDASLGIDFGPIYLYTGQGVLVRNDSGITVLPALN 2986 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G + V G T+ + D P F +E+ AAY DA D++ L Sbjct: 2987 GRRVGVLEGATSLQNIQDTITELGGDIIPAEFTTNDEMFAAYDDGDIDAVITDMTILNGR 3046 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 P EH IL DI+SK PL I + +EW ++V W A+V AEE IT KNI ++ Sbjct: 3047 VQNLSNPKEHKILDDILSKEPLGLIIDENQSEWSDVVRWVTNALVQAEEYDITSKNIKRL 3106 Query: 265 SKDTTNPD--------VQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 + + D V++FLGI+ NIG+ LGL D+ +I+ +GNYGE+++R Sbjct: 3107 MANNLDDDPNNDSDPVVRQFLGIE--GNIGKVLGLPNDFVPNVIKAVGNYGEIYERYF-- 3162 Query: 317 QSELKIPRGYNALWSKGGLMYAPPI 341 S L +PR N L+S GL YA P+ Sbjct: 3163 DSNL-LPREQNELFSNFGLQYALPL 3186 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 104/323 (32%), Positives = 168/323 (52%), Gaps = 27/323 (8%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L DI KRG +K I+ +G+ FD++F +++A+F D SK++ + Sbjct: 2548 LDDIIKRGQIKVAISG----------SGNE--FDLEFAEVIAAAVFGDASKVKSITSKFS 2595 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 + F + + D+ ++ TL R+ L + F P FD Q I+ I++VS L+ Sbjct: 2596 KSFELVADGKADLAAQRITATLGRDGELNVDFAPTYLFDYQTVIVPNDSDITNVSHLNEQ 2655 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 +I V GTT + L + + +K+ P +FE EE+ AAY A DAY+ D S + Sbjct: 2656 TIGVIEGTTALINLQNQLEVEGIKFTPKLFETAEEMIAAYDAGEVDAYSHDRSLILENLD 2715 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 +P H +L +SK P++ A+ + D++W ++V W Y + AEE GI+ +NI + Sbjct: 2716 QLSQPENHRLLDVELSKEPISLALPENDSQWADVVRWAGYVPIQAEEFGISSQNIAEFIA 2775 Query: 267 DTTNPD--------VQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 T+ + ++RFLGI+ N+GE LGL D+ II +GNY E++DR+ Sbjct: 2776 LNTDDNPTNDSSLGIRRFLGIE--GNLGETLGLPNDFAVNIINQVGNYSEIYDRHFS--- 2830 Query: 319 ELKIPRGYNALWSKGGLMYAPPI 341 I N+LWS GG +Y+PP Sbjct: 2831 --GIEGDRNSLWSDGGFLYSPPF 2851 >gi|117923521|ref|YP_864138.1| extracellular solute-binding protein [Magnetococcus sp. MC-1] gi|117607277|gb|ABK42732.1| amino acid ABC transporter substrate-binding protein, PAAT family [Magnetococcus sp. MC-1] Length = 342 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 111/328 (33%), Positives = 181/328 (55%), Gaps = 4/328 (1%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + + L ++ RG L CG+ TG F++ + +G W GF D+CRAL+ A+ DD Sbjct: 18 APAQAAPASDTLDKVRARGLLNCGVMTGTPAFSQQQPDGAWHGFFADWCRALAVAVLDDA 77 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 + ++ + RF AL Q+D++ NT WTL RE + F I +DGQ K Sbjct: 78 RAVHFIQVTPATRFKALTELQVDVVMSNTTWTLSREYQYQVRFPAIYLYDGQAIATRKDT 137 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 +++Q + A++CV+ +T+ L +Y + +N+ ++ + + I A+ HRCD T Sbjct: 138 RWHTLAQANQATVCVEPNSTSHANLQEYAQRNNLNFNYLALNQQG-IITAFLEHRCDLIT 196 Query: 196 GDI-SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + LK T ++V+ + +S+ PLAP + D W IV A++ A+E Sbjct: 197 DDRIALTANLKTTASNDQDYVVFAETLSREPLAPMVRADDERWQRIVRMVVQALLVADEK 256 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314 G+++ + Q + ++P+VQR LG + G+ +GL++ W R+I +GNYGE+F R+L Sbjct: 257 GVSRDALKQNRERLSDPEVQRLLGSEDDP--GQFVGLSRGWARRMIEAVGNYGELFARHL 314 Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342 G QS L++PR N WS+GGL YAPP R Sbjct: 315 GAQSSLQMPRLLNRPWSRGGLFYAPPFR 342 >gi|148555539|ref|YP_001263121.1| extracellular solute-binding protein [Sphingomonas wittichii RW1] gi|148500729|gb|ABQ68983.1| extracellular solute-binding protein, family 3 [Sphingomonas wittichii RW1] Length = 347 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 125/312 (40%), Positives = 199/312 (63%), Gaps = 5/312 (1%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L ++ RG+++CG + GF+ +G W+G DVD CRA++ A D K++++PL Sbjct: 34 TLEAVRSRGYVRCGASKEAPGFSGPDESGRWRGLDVDTCRAIAVAALGDREKVRFVPLTG 93 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 ++R ALQ+ +ID+L R T WTL R+ G+ F TY+D F++ +K G+ ++ L G Sbjct: 94 QQRITALQTGEIDVLPRTTTWTLRRDA-AGINFTIPTYYDYTAFMVRRKVGVRDLAGLRG 152 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 AS CVQ+G+ TE+ LAD + + + P++F+ V+ A+ + RCDA D SAL AL+ Sbjct: 153 ASACVQSGSMTEVILADVSRKYRLALRPVIFDNVQSTRQAFLSGRCDALITDASALAALR 212 Query: 206 LTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 T R ++VILP + +PL PA+ GD +W++IV ++ AM+ E+LGI + +++ Sbjct: 213 ATLPGRADDYVILPADSNVAPLTPAVRHGDDQWFDIVKFSIEAMIDGEQLGIGRDTADRL 272 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324 + +P+V+RFLG++ G ALG++ D+ Y+I+R +GNYGE++D NLG++S L IPR Sbjct: 273 RA-SADPNVRRFLGVEP--GNGRALGISDDFAYQIVRQIGNYGEVYDDNLGSRSRLNIPR 329 Query: 325 GYNALWSKGGLM 336 G N L GGLM Sbjct: 330 GLNRLQRDGGLM 341 >gi|83593850|ref|YP_427602.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC 11170] gi|83576764|gb|ABC23315.1| extracellular solute-binding protein, family 3 [Rhodospirillum rubrum ATCC 11170] Length = 373 Score = 266 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 109/321 (33%), Positives = 166/321 (51%), Gaps = 3/321 (0%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 N L I+ RG + CG N + GF ++G+W+GF +DFCRAL++A DP+ + +P Sbjct: 55 NGDTLTSIRDRGSVTCGTNP-IPGFGFPDSDGNWRGFFIDFCRALAAATLGDPTAFEVVP 113 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + R+ AL S D+ + WTL R+ +LG F + +DGQ F+ SV Sbjct: 114 VESNSRWEALNSHTTDVNVDGSTWTLSRDTALGFDFPGVLIYDGQRFLAKPSVPEGSVKA 173 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 +G +C+ GTT E+ L D+ K ++++ I E E ++ RC+ + D L Sbjct: 174 AAGLRVCIIMGTTAEVNLRDFLKKNDLEMTVIATESDEGAWTSFLKGRCELFVNDGIGLA 233 Query: 203 ALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 P + ++ + ISK PL P + D +W I W ++ AEE GI+ + Sbjct: 234 LRNALHMTPPRVNHLMTEAISKEPLGPVVRGDDHQWLEINRWVLNVLIAAEEAGISSTTL 293 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 S R + + ALGL W R+I +GNYGE+FDRNLG SE+ Sbjct: 294 VDPSPTADLSSEDRVF-VGGPEDNAAALGLEPGWARRVIAAVGNYGEVFDRNLGKGSEIG 352 Query: 322 IPRGYNALWSKGGLMYAPPIR 342 + RG NALWS+GGLM +PP++ Sbjct: 353 LDRGVNALWSEGGLMISPPLQ 373 >gi|261314499|ref|ZP_05953696.1| cationic amino acid ABC transporter [Brucella pinnipedialis M163/99/10] gi|261303525|gb|EEY07022.1| cationic amino acid ABC transporter [Brucella pinnipedialis M163/99/10] Length = 247 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 138/248 (55%), Positives = 183/248 (73%), Gaps = 3/248 (1%) Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGT 154 +D+L RNT WT+ R+ SLGL F I Y+DGQGF++ K GI+S QLSGASICVQAGT Sbjct: 1 MDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMINSKKLAGINSALQLSGASICVQAGT 60 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 TTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + RCDAYT D S+LY ++L P +H Sbjct: 61 TTELNMADYFRANKMEYNPVVFEKIEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDH 120 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 VILP+IISK P + QGD W ++V WTH A++ AEE GITQ N+ ++ K + NPD++ Sbjct: 121 VILPEIISKEPFGLTVRQGDARWADVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIK 179 Query: 275 RFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGG 334 R LG + + IG LGL KDW +II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGG Sbjct: 180 RLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGG 239 Query: 335 LMYAPPIR 342 L Y P+R Sbjct: 240 LQYGIPVR 247 >gi|209546999|ref|YP_002278917.1| family 3 extracellular solute-binding protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538243|gb|ACI58177.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 345 Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 112/318 (35%), Positives = 187/318 (58%), Gaps = 7/318 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 S+L +K+RG L CG + GF + +G DVD CRA ++A+ DP K+ ++ + Sbjct: 27 SVLDSVKQRGVLNCGTDNTTPGFGYLNPKTSKMEGVDVDLCRATAAAVLGDPDKVNFVVV 86 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 K RF A+Q+ Q+DI+ +T R +L + F P +FDG G ++ G+ S++ L Sbjct: 87 TDKSRFNAVQTGQVDIVYAHTSVFASRAAALAVDFLPSYFFDGGGVMVTAASGVKSINDL 146 Query: 144 SGASICVQAGTTTELTLADYFKAHN-MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 SGA+IC G+ +E TLA KA N + F+ E++ +A + RC+ D SAL Sbjct: 147 SGATICTTQGSGSEATLAQEVKARNLTNTKILTFDTSEKLFSALTSGRCNGMYTDKSALA 206 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 A + + + +++VILP+ ++ +P A I+Q D EW +++WT YA+ AEE GIT N++ Sbjct: 207 AWRGNSQKSADYVILPETLAVAPFAGIIVQNDPEWRKLMTWTLYALFQAEEWGITSANLS 266 Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322 ++ K + +P +Q+FLG++ G ++ + +I+ +GNYGE++DR+LG ++ L + Sbjct: 267 EMQK-SADPAIQKFLGVN--GGFGADFHVSDSFIADMIKGVGNYGEIYDRSLGPKTPLYL 323 Query: 323 PRGY--NALWSKGGLMYA 338 R NAL GGL+Y+ Sbjct: 324 ERDKTSNALSKNGGLLYS 341 >gi|144897558|emb|CAM74422.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Magnetospirillum gryphiswaldense MSR-1] Length = 335 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 115/340 (33%), Positives = 175/340 (51%), Gaps = 12/340 (3%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F ++L + + + +L + RG + CG++ GF G G +VD Sbjct: 7 SFMTAMLFALSAPAPTPALAGQVLDRVLTRGKVVCGVDQT-PGFGGFDDRGVPVGLEVDL 65 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 CRA+++AI +P IQ + K +F AL ++D+ T WT R+ ++ +F I + Sbjct: 66 CRAIAAAILKNPQAIQVQRVTTKYKFHALAEGELDVAFGMTTWTFDRDTTMMASFPAIAF 125 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 +DGQGF+ + + ++ICVQ+GTT+ LA+Y + EE Sbjct: 126 YDGQGFMKWAD---IADPWAATSTICVQSGTTSANNLAEYLSRRKSAAKVLALSSSEEKF 182 Query: 184 AAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +A+ RC A TGD + L K + V+L IIS+ PL PAI D EW++IV Sbjct: 183 SAFAERRCTAVTGDSTELAVQKNRRSATQPSWVLLETIISREPLGPAIFNNDPEWFSIVR 242 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 W+ + AE G+ + N+ V + +++R LG + G L L + W RII Sbjct: 243 WSMLIPIIAEARGLGRYNLESVPAT--DAELRRLLGEEP--GFGANLRLDQAWARRIIAS 298 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F RNL + L I RG NALWS+GGL+YAPP+R Sbjct: 299 VGNYGEIFARNL---APLGIVRGQNALWSEGGLLYAPPLR 335 >gi|67923106|ref|ZP_00516597.1| Hemolysin-type calcium-binding region:Bacterial extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] gi|67855059|gb|EAM50327.1| Hemolysin-type calcium-binding region:Bacterial extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] Length = 712 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 108/325 (33%), Positives = 177/325 (54%), Gaps = 14/325 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL-PL 83 +L +IK RG LK GIN GF+ NG + GFDVD +A++ A+F+D +KI+++ Sbjct: 211 DLLQEIKDRGILKLGINGQKPGFSFPDENGSYIGFDVDLGKAIAVAVFNDSNKIEFVERE 270 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + + + +D+ + L+R+ G+ F + GQGF++ K GI +++ L Sbjct: 271 DRVTWLTNVANGVVDVTAAQVTQNLVRDGKAGVDFISPYLYTGQGFLVRKDSGILNLATL 330 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +G + + +GTT E L D K + + P+ ++ ++E+ A Y DA D+ L Sbjct: 331 NGHEVGLFSGTTAEQNLQDAMKEYGGTFIPVYYDNLDEMLAGYAQGDIDAIINDLPLLGG 390 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L T P EH++L D+ISK PL+ + + ++W + VSW Y ++ AEE GITQ NI+Q Sbjct: 391 LIDTFSNPDEHLLLDDVISKEPLSMVVDENQSDWKDAVSWVQYGLLQAEEYGITQDNIDQ 450 Query: 264 VSKDTTNPD--------VQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 + D T+ + + FLGI+ N GE LGL D+ +I+ +GNYGE+++R+ Sbjct: 451 ILADNTDSNPDNDSDISTRIFLGIE--GNAGELLGLENDYMVNVIKAVGNYGEIYERHFD 508 Query: 316 NQSELKIPRGYNALWSKGGLMYAPP 340 + +PR +N L GL P Sbjct: 509 SD---ILPRDFNQLSGDFGLQIPYP 530 Score = 178 bits (452), Expect = 9e-43, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 15/200 (7%) Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + G+T L ++ +++ P +E + A Y A DA + D S +Y T Sbjct: 1 MIEGSTALTNLEILLSSNGVEFEPRFYESTSAMFADYDAGNIDALSTDRSLIYGRLDTLS 60 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK--- 266 P H IL S P+A + + D++W N+V W A + AEELG+ NI Q+ Sbjct: 61 EPDAHHILDVEFSSEPIAMVLPEDDSQWNNVVKWVINATIEAEELGLNSDNIEQILAVNK 120 Query: 267 -----DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 + ++P ++RFLGI+ +GEALGL D+ Y I++ +GNY E++DR+ + Sbjct: 121 DENPNNDSDPAIRRFLGIESQ--LGEALGLPNDFAYNIVKLVGNYDEIYDRHFPD----- 173 Query: 322 IPRGYNALWSKGGLMYAPPI 341 + R N L+S GGL+Y+PP Sbjct: 174 LERDRNLLYSDGGLLYSPPF 193 >gi|218672485|ref|ZP_03522154.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli GR56] Length = 219 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 129/220 (58%), Positives = 176/220 (80%), Gaps = 1/220 (0%) Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DGQGF++ K + S +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++E+ Sbjct: 1 YYDGQGFMVRKSLNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLDEV 60 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +AAY A RCD YT D S LY+L+LT P EH ILP+IISK PL PA+ QGD +W++IVS Sbjct: 61 NAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHAILPEIISKEPLGPAVRQGDDQWFDIVS 120 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 W YA++ AEE GITQ N++ + K++ NPD++RFLG++ + IG LGLT +W Y II++ Sbjct: 121 WVGYALINAEEFGITQANVDDM-KNSPNPDIKRFLGVEADTKIGTDLGLTNEWAYNIIKN 179 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F+RN+G S+LKI RG NALW+KGG+ YAPP+R Sbjct: 180 VGNYGEVFERNVGQGSQLKIARGLNALWNKGGIQYAPPVR 219 >gi|282899859|ref|ZP_06307820.1| hypothetical protein CRC_01252 [Cylindrospermopsis raciborskii CS-505] gi|281195129|gb|EFA70065.1| hypothetical protein CRC_01252 [Cylindrospermopsis raciborskii CS-505] Length = 9381 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 104/329 (31%), Positives = 171/329 (51%), Gaps = 17/329 (5%) Query: 25 SILGDIKKRGFLKCG----INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 ++L +I+ RGF+K G +G GFAE+ + G +KGFDVD +A+++A+F DPSK++Y Sbjct: 8644 NLLAEIQNRGFIKYGLPQITGSGFPGFAEIDSQGQYKGFDVDLSKAIAAAVFGDPSKVEY 8703 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 F + +D+ + L+R+ LG+ + P+ GQG + K GI+ + Sbjct: 8704 TQQAFANSFANTANGLVDVSAAGYTGNLMRDAGLGVDYSPVYIHTGQGILTRKDSGITGI 8763 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+G++I T L+D K F+ ++ AAY DA D + Sbjct: 8764 ATLNGSTIGALTTVTAIENLSDLTKKFGSTIIITPFDDKNKMYAAYEKGEIDAVYNDKTL 8823 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + T P H ILP+ SK PL + + ++W ++V W ++V AEE GIT N Sbjct: 8824 LAGIIPTLSDPQAHEILPETFSKEPLTLILDENQSDWADVVRWVMNSLVQAEEYGITSTN 8883 Query: 261 INQVSKDTTN--------PDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDR 312 I+ + + ++Q FLG+ N G +LGL+ D+ ++I+ +GNYGE++ R Sbjct: 8884 IDDIIAKNRDNDPNNNSIKEIQAFLGL--QGNPGASLGLSSDFVVKMIKAVGNYGEIYAR 8941 Query: 313 NLGNQSELKIPRGYNALWSKGGLMYAPPI 341 N + + +PR N L+ GL YA P+ Sbjct: 8942 NF--DTNI-LPREKNDLYHFSGLQYALPL 8967 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 93/339 (27%), Positives = 169/339 (49%), Gaps = 29/339 (8%) Query: 16 FFTSFSTNASILGDIKKRGFLKC-GINTGLVGFAEVKANGDWKG-FDVDFCRALSSAIFD 73 T+ + ++L +I++RG+++ G + G FD F RA+++AIF Sbjct: 8306 TVTTSANPDNLLAEIQQRGYIRFSGGRSDS-----------ISGVFDYQFVRAIAAAIFG 8354 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 D +++ +P E F + +KQ+D+ +R+ L+R+ L + F P+ Y+D ++ Sbjct: 8355 DANRVDQVPGTFSESFSQVANKQVDLSTRHITQNLVRDGELNVDFGPVYYYDFLSVLVRN 8414 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 K GI L+G I V TT L + + +++ VF+ ++ AAY DA Sbjct: 8415 KSGIQGAKDLNGKKIGVVKNTTALTNLDNLLDSIGVQFTAEVFDTQNDLYAAYNLGEVDA 8474 Query: 194 YTGDISALYAL--KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 D +Y + + EH L SK P+ I + ++EW ++V W Y + A Sbjct: 8475 IASDKGIIYDALEREILENKQEHRFLDIQFSKEPIGLVIPENESEWGDVVRWVVYTTIQA 8534 Query: 252 EELGITQKNINQVS--------KDTTNPDVQRFLGIDK-SSNIGEALGLTKDWTYRIIRH 302 EE GI +NI+++ K+ ++P ++RFLG++ ++G AL L +D+ ++I+ Sbjct: 8535 EEYGINSQNIDRLLADNTDDNSKNDSDPAIRRFLGLEGLEGSLGSALELPQDFVVQVIKQ 8594 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 +GNYGE++ R+ + + R N L GGL+ + P Sbjct: 8595 VGNYGEIYQRSFPS-----LTRDLNLLSLTGGLLESLPF 8628 >gi|288962134|ref|YP_003452429.1| ABC transporter amino-acid binding protein [Azospirillum sp. B510] gi|288914400|dbj|BAI75885.1| ABC transporter amino-acid binding protein [Azospirillum sp. B510] Length = 352 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 105/332 (31%), Positives = 169/332 (50%), Gaps = 8/332 (2%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 L +++ + L I RGFL CG+ +G+ G + G GF VD CR ++A Sbjct: 26 ALTSPAWAGDGDTLERIHGRGFLICGLRSGVSGISFSDPQGHLDGFLVDVCRVFAAATLG 85 Query: 74 DPSKIQYLPL-NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 + I+ + L + F A++ ++D+ T WT R++S + F DGQGF +H Sbjct: 86 NAQAIRVVRLPEKPQEFQAVEKHEVDVALTTTTWTFSRDLSNDIEFLMPLLHDGQGFAIH 145 Query: 133 KKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 G ++CV+ TTT L D+ + ++ + F+ ++E A+ AH C Sbjct: 146 SDGTPPPPLDRLGPRTVCVKTATTTVRNLEDHIRKSDLPWTMRTFQTLDEALQAFLAHEC 205 Query: 192 DAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 D T D + L + + + PD+IS+ PL P I +GD WY++ W +A+V Sbjct: 206 DLLTTDRTVLVTSLAGYRKAGMGIYIYPDVISREPLTPYIARGDRNWYDVTRWILHAIVL 265 Query: 251 AEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMF 310 A+ G+T ++ Q + +P++ R LG S N LGL DW + + +GNYGE+F Sbjct: 266 ADARGVTSADV-QAGRVPDDPELHRMLG--HSGNAARMLGLPDDWALQALAQVGNYGEIF 322 Query: 311 DRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +RNLG + RG N W++GGL+Y+PP R Sbjct: 323 ERNLGI--PYGMDRGPNKPWTQGGLLYSPPFR 352 >gi|117925598|ref|YP_866215.1| extracellular solute-binding protein [Magnetococcus sp. MC-1] gi|117609354|gb|ABK44809.1| amino acid ABC transporter substrate-binding protein, PAAT family [Magnetococcus sp. MC-1] Length = 360 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 113/348 (32%), Positives = 185/348 (53%), Gaps = 10/348 (2%) Query: 3 KDFFVSILCLIILFFTS-------FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 + V + L I + ++ S + IK RG L+CG+ + + + +G+ Sbjct: 15 RKLGVVLALLWIACWLPQAGWCGEAASLGSTVQGIKDRGVLRCGVEQNTLTMSAMDRDGE 74 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 W+GF VD C AL A+ ++ + +N R+ AL+ D+L N+ WTL RE +LG Sbjct: 75 WRGFMVDLCHALGVALLGTTQDVEIIEVNKHLRYEALKGNAYDVLMSNSTWTLTRETALG 134 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F FDGQGF+ H K+G + +S A+ICV TT+ L H + Sbjct: 135 VRFVTPYLFDGQGFLAHLKQGRTRLSAYDKANICVLDSTTSLTNLKALLAQHYPHFTLTS 194 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGD 234 F +E + ++ + CD + D L + +L + IL DIIS+ PL P + QGD Sbjct: 195 FVTLERMRESFFSGNCDMLSSDRLVLASEQLVRGGEQGAYHILEDIISREPLGPYVRQGD 254 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294 +W++++ W ++ AE G+T+ N+++++ T + ++Q LG+ N +ALG+ Sbjct: 255 EQWFSLLRWLVQGLLLAEHKGVTRDNVDKLAGTTEDREIQHLLGV--VGNAHQALGVDAQ 312 Query: 295 WTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 W R+IR +GN+ E++ RNLG ++L + RGYN LW KGGL Y PP + Sbjct: 313 WMRRVIRVVGNFEEIYQRNLGALAQLGVRRGYNGLWYKGGLHYVPPFQ 360 >gi|256376161|ref|YP_003099821.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] gi|255920464|gb|ACU35975.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] Length = 319 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 99/325 (30%), Positives = 169/325 (52%), Gaps = 7/325 (2%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ ++ + + I++RG L+ G++TG+ G + G +G DVD RA+++A+F +P Sbjct: 1 MTTSASLSPTVSAIRRRGHLRLGVSTGIRGLSWTDDAGVRRGLDVDTGRAVAAALFGEPG 60 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 +I+Y ++ ++R A+ S +D+L+ N WT RE +AF T +D ++ + G Sbjct: 61 RIEYTEIDPEDRIRAVTSDAVDLLACNATWTFSRECDANVAFVLTTCYDEGAILVRRDSG 120 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+S L G ++ + GT++E L +F H + AAY + Y Sbjct: 121 IASADDLDGHTLGMCEGTSSEEALRAWFGPRGRAVHCKHYASPAAALAAYASGEVTGYVA 180 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D + + PS+HV+LP+ +S P+ P + D +W W +A++ AE G+ Sbjct: 181 DGVVVAGERTRLATPSDHVVLPERVSVEPMGPVVKDDDPQWVKTARWVFFALIAAEAAGV 240 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 T + + + + S + GL W ++ +GNYGE+++RNLG+ Sbjct: 241 TSHQVRAGTAEDPPL-------LKDQSRLAAKAGLHPRWISAVVGEVGNYGEIYERNLGD 293 Query: 317 QSELKIPRGYNALWSKGGLMYAPPI 341 S L+IPRGYN LW +GGLMYAPP+ Sbjct: 294 ASGLRIPRGYNELWLRGGLMYAPPL 318 >gi|197104926|ref|YP_002130303.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Phenylobacterium zucineum HLK1] gi|196478346|gb|ACG77874.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Phenylobacterium zucineum HLK1] Length = 310 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 105/311 (33%), Positives = 175/311 (56%), Gaps = 6/311 (1%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K R ++ CG + G+ G + G W+GFDVD CRA ++A+ D KI+++PLNA +R Sbjct: 2 KGRDYVTCGASQGITGLSRPDERGVWRGFDVDVCRAFAAALLGDAQKIRFIPLNAAQRLP 61 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 ALQ+ +ID+LSR T T R+ + + F +T FD I K+ G +S + L+G ++C+ Sbjct: 62 ALQTGEIDVLSRTTTMTFTRD--MAVRFVTVTQFDTDVLIFRKRLGAASPADLNGRTVCL 119 Query: 151 QAGTTTELT-LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 Q+G ++ L +++ + F+ AY + RCD Y D + T Sbjct: 120 QSGGSSADNTLTRVEAEAKIRFERVYFDSTITARDAYFSARCDVYVTDGFLGASQVATVA 179 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 R + L + P AI +GD W+++V WT ++ AE+ G+TQ N++++ + + Sbjct: 180 RDPDDHALLYLDHLLPQGVAIARGDDRWFDVVRWTVNLLIWAEQNGVTQANVDELRR-SG 238 Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329 DV+R LG D + G A+GL DW Y++++ +GNYGE+++RNLG ++ +K R N Sbjct: 239 PADVRRVLGADPA--FGRAIGLEPDWGYQVLKQVGNYGEIWERNLGARTRIKADRRLNRP 296 Query: 330 WSKGGLMYAPP 340 + GGL++ P Sbjct: 297 YKDGGLLFPYP 307 >gi|288962967|ref|YP_003453261.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] gi|288915233|dbj|BAI76717.1| general L-amino acid transport system substrate-binding protein [Azospirillum sp. B510] Length = 353 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 96/327 (29%), Positives = 162/327 (49%), Gaps = 6/327 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 ++ +T+ +L +I++RG ++CG++ GFA G GF VD CRAL++A+ Sbjct: 31 SARATDRPVLAEIERRGVVRCGVSFN-PGFAANDDGGRPVGFMVDLCRALAAAVLGKADA 89 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I+ L+ + F A+ + ++D+ T WTL R+++ + F P ++D QG + Sbjct: 90 IEIRRLSKPQEFDAVAAGEVDVSFAQTSWTLTRDVTHAVDFGPPVFYDVQGIAAWRLPDG 149 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S ++C+ AGTTT+ + + F + A+ + C A D Sbjct: 150 GSALDGGELTVCMPAGTTTQAEMESLIAGGKRPWKLRSFPGWPDALEAFLSRDCAALGAD 209 Query: 198 ISALYALKLTNDRPSEHVILPD--IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L P + + + D + S+ PLAP D W V WT +A+ A++ G Sbjct: 210 RAQLTTALHMLGLPPDSLEITDAPLASREPLAPMTPNSDRNWMAAVRWTMFALFLADDAG 269 Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 ++ N N + T +++R L + GL DW Y+ + +GNYGE+FDRNLG Sbjct: 270 VSGANAN-FQRITGGSEMRRLL--SGIPEVAAKAGLRPDWAYQAVVQVGNYGEIFDRNLG 326 Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342 +S K+ RG N W++GGL+YAP + Sbjct: 327 ARSPFKLERGLNRPWTQGGLLYAPVFQ 353 >gi|330899538|gb|EGH30957.1| extracellular solute-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 218 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 109/220 (49%), Positives = 153/220 (69%), Gaps = 2/220 (0%) Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y+DG GF+++ K G++S +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+ +E Sbjct: 1 YYDGIGFLVNNKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSDES 60 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + RCD T D S LYA + +P ++++LP++ISK PL P + +GD EW++IV Sbjct: 61 AKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSIVR 120 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302 WT +AM+ AEE IT KN+ +K T NPDV R LG D G+ L L KDW +I++ Sbjct: 121 WTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGQDLKLPKDWVVQIVKQ 178 Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 +GNYGE+F+RNLG + LKI RG NALW+ GG+ YAPPIR Sbjct: 179 VGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 218 >gi|254464335|ref|ZP_05077746.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Rhodobacterales bacterium Y4I] gi|206685243|gb|EDZ45725.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Rhodobacterales bacterium Y4I] Length = 333 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 106/345 (30%), Positives = 177/345 (51%), Gaps = 19/345 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + F+S L L + + A I+ RG+L CG+ + +GFA ++ +G+W Sbjct: 1 MMR--FLSALTLGLWLAGALGAEAGEGDTGAAIRDRGYLLCGVGSDDLGFATLRYDGEWT 58 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVDFCRA+++A+ D + ++++PL++ R L ++D+L R T +T R+++ L Sbjct: 59 GFDVDFCRAVAAAMLGDATAVEFVPLDSLNRLEVLARGEVDVLFRTTTFTFDRDVNAALE 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F IT++D Q +++ G +++ L+G ++C +GTT+ + + + Sbjct: 119 FPAITFYDSQKVLVYADTGARTLADLAGKTVCANSGTTSITNIRHRIDSLGGGIGIQEYA 178 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTE 236 A+ C+A T D S L A+ + + V+L D I+ PL P + + D + Sbjct: 179 SQAGRWRAFFGRECEAVTADGSDLAAMLASRPGYRDDFVLLEDEIANEPLGPVVREDDRQ 238 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296 W IV W + AE GI Q + ++ R G LG+ W Sbjct: 239 WEQIVRWVINLTLVAEAAGIGQ--------TSGPAEIARL-----PLPAGADLGVAGTWG 285 Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 +IR +GNY ++F RNLG+ SEL++ RG NALW+ GGLMY P+ Sbjct: 286 ADVIRQVGNYDDIFSRNLGDGSELRMARGRNALWTDGGLMYPLPM 330 >gi|56697219|ref|YP_167584.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ruegeria pomeroyi DSS-3] gi|56678956|gb|AAV95622.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ruegeria pomeroyi DSS-3] Length = 333 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 108/345 (31%), Positives = 177/345 (51%), Gaps = 19/345 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + F L L + + S A I+ RG+L CG+ + +GFA ++ +G+W Sbjct: 1 MMR--FRGALTLGLWLAGALSAQAGEGDTGAAIRDRGYLLCGVGSDDLGFATLRFDGEWT 58 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVDFCRA+++A+ D + ++++PL++ R L ++D+L R T +T R+++ L Sbjct: 59 GFDVDFCRAVAAAMLGDATAVEFVPLDSLNRLEVLARGEVDVLFRTTTFTFDRDVNAALE 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F ITY+D Q +++ G ++S L+G ++C +GTT+ + + + Sbjct: 119 FPAITYYDSQKVLVYADTGARTLSDLAGKTVCANSGTTSITNIRHRIDSLGGGIGIQEYA 178 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTE 236 A+ C+A T D S L A+ + + V+L D I+ PL P + + D + Sbjct: 179 SQAGRWRAFFGRECEAVTADGSDLAAMMASRPGYRDDFVLLEDEIANEPLGPVVREDDRQ 238 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296 W IV W + AE GI Q + ++ R + G LG+ W Sbjct: 239 WEQIVRWVINLTLVAETAGIGQV--------SDPEEIARL-----ALPAGADLGVVDTWG 285 Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 +IR +GNY ++F RNLG+ SEL++ RG NALW+ GGLMY P+ Sbjct: 286 AEVIRQVGNYDDIFRRNLGDGSELRMERGRNALWTDGGLMYPLPM 330 >gi|224367657|ref|YP_002601820.1| AapJ2 [Desulfobacterium autotrophicum HRM2] gi|223690373|gb|ACN13656.1| AapJ2 [Desulfobacterium autotrophicum HRM2] Length = 219 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 108/222 (48%), Positives = 153/222 (68%), Gaps = 3/222 (1%) Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y+DGQGF++ KK G+ +L GA++CV GTTTE +ADYF+A+ MK +P+V E Sbjct: 1 MNYYDGQGFLISKKLGVKDAKELDGATVCVLPGTTTEQNVADYFRANGMKMNPVVIENTA 60 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E+ A+ A RCD T D S L + P +++ILP IISK PLAPA+ GD +W ++ Sbjct: 61 ELAKAFFAGRCDCLTSDASQLAGTRAVAPNPDDYIILPTIISKEPLAPAVRHGDNKWKDV 120 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V+++ AM+ AEELGIT KN+++ K +T+P VQRFLG+ G+ALGL + + Y I+ Sbjct: 121 VNYSVLAMINAEELGITSKNVDEKLK-STDPKVQRFLGVSP--GNGKALGLDEKFAYNIV 177 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 + +GNYGEMF+RN+G + LKI RG NALW+ GGLMY+ P + Sbjct: 178 KQVGNYGEMFERNVGMDTPLKIERGLNALWTNGGLMYSAPFK 219 >gi|119488696|ref|ZP_01621705.1| extracellular solute-binding protein, family 3 [Lyngbya sp. PCC 8106] gi|119455119|gb|EAW36260.1| extracellular solute-binding protein, family 3 [Lyngbya sp. PCC 8106] Length = 607 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 98/320 (30%), Positives = 175/320 (54%), Gaps = 11/320 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL-PL 83 ++L ++ RGF++ G+ G + NG+ GFDVD RAL++++F DP+ ++++ Sbjct: 295 NVLQEVLDRGFVRVGVRNDAQGLGFAEENGNLTGFDVDLGRALAASLFGDPNAVEFVIQT 354 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 +RF + + +D+ SRN L R+ LG+ F PI +D Q + GI+++ QL Sbjct: 355 TGSQRFSDVANGVVDVTSRNATHNLRRDALLGVDFAPINTYDAQFVVTPTASGITTLEQL 414 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +G I V AGTT+E L + A + + + + I +Y DA TGD + + Sbjct: 415 AGGRIGVSAGTTSETRLQEKLSAAGINAEVVALDNFQTIFDSYINGELDAITGDGGLIIS 474 Query: 204 LKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 LT + S+H P+++ + PLA + + ++W ++VS YA+ A ELG+T +N+ Sbjct: 475 SLLTLPVEQRSQHQPFPEVLGEEPLAMVVDENQSQWKDVVSGVTYAVTEALELGLTSENV 534 Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321 + ++NP ++RFLG++ N+GE+LGL D+ I +GNY EM +RN ++ Sbjct: 535 TAELE-SSNPVIRRFLGVE--GNVGESLGLPNDFALNAISAVGNYREMTERNF---PGIE 588 Query: 322 IPRGYNALWSKGGLMYAPPI 341 + +++GG +++ P Sbjct: 589 LEGIL--PYTEGGTLFSVPF 606 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 91/283 (32%), Positives = 158/283 (55%), Gaps = 9/283 (3%) Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D+ RAL++A+FD+P+ ++++ + A E F ++ S +DI + ++LR+ +LG+ F P Sbjct: 3 IDYSRALATALFDNPNSVEFVVVEAGEDFNSVASGTVDIAATLPTHSVLRDATLGVDFSP 62 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +FD QG ++ GI+SV QL ++ V AGT ++ L D + + + F + Sbjct: 63 TVFFDTQGVLVRGDSGINSVEQLQETTVGVLAGTRSQQNLEDAAQRAGITLNIQTFPSQD 122 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ AAY A + + + L T P VIL + I K PLA + + ++E+ ++ Sbjct: 123 DLFAAYDAGEIGSVSINRGVLSNRIPTLSNPGNQVILEENIGKEPLAFIVPENESEFADV 182 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V W A + AE GI +N+N+ ++ ++RFLG+ S N+GE+LG+ D+ II Sbjct: 183 VRWVVNAPIQAEFFGINSQNVNEFLDGNSD--IKRFLGV--SGNLGESLGIDNDFALNII 238 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNAL--WSKGGLMYAPPI 341 + +GNY E+++RN + +PR N L GGL+Y PP Sbjct: 239 QQVGNYEEIYNRNFDETA---LPRNLNELMFVEPGGLVYYPPF 278 >gi|254230451|ref|ZP_04923829.1| hypothetical protein VEx25_B0035 [Vibrio sp. Ex25] gi|151937022|gb|EDN55902.1| hypothetical protein VEx25_B0035 [Vibrio sp. Ex25] Length = 222 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 114/225 (50%), Positives = 153/225 (68%), Gaps = 3/225 (1%) Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + Y+DGQGF++ K GISS +L GAS+CVQ+GTTTEL LADYF+ M Y P+VF+ Sbjct: 1 FVGVNYYDGQGFMVKKDLGISSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFD 60 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + A RCD T D S LYAL+L PS +LP+IISK PL P + QGD +W Sbjct: 61 TAAQTSKGFDAGRCDVLTTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQW 120 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 +NI WT AM+ AEE GI+ KN +++ K + +P+++R LG+D G+ LG+ DW Y Sbjct: 121 FNIAKWTLSAMINAEEYGISSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGY 177 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 ++I+ +GNYGE F+R +G S L+I RG NALW+ GG MYAPPIR Sbjct: 178 QVIKQVGNYGESFERTVGTGSPLEISRGVNALWNAGGFMYAPPIR 222 >gi|327395693|dbj|BAK13115.1| general L-amino acid-binding periplasmic protein AapJ precursor [Pantoea ananatis AJ13355] Length = 323 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 108/319 (33%), Positives = 164/319 (51%), Gaps = 7/319 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 +++ I++ L G++ G G ++ N W GFD+D RA++ ++ D KI ++PL Sbjct: 5 AVIKRIEQHDVLNVGVSLGFKGLSQRDPLNNSWNGFDIDLARAVAISVLGDGGKIHFIPL 64 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ- 142 + +RF AL+ ID+ + N T RE G+ F FDG+ + + Q Sbjct: 65 QSADRFQALRDGVIDLGTFNASVTFQREAEYGINFLHPMLFDGEVLMTPRSNLTEETPQA 124 Query: 143 --LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 I G+TTE L YF N+ ++F+ ++ AY + CD Y D Sbjct: 125 RFTRQRRIAAMRGSTTEENLTRYFDELNLPCEILLFDSPQQARQAYESGECDIYCLDGYL 184 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L S+H+IL D IS +APA+ D++WY W A++ AE LGITQKN Sbjct: 185 LAGEHHQLTDSSQHLILDDRISLEAMAPAVSASDSQWYIATKWVMRALIEAENLGITQKN 244 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 I + S + ++ FL D N+ LGL D+ IIR +GNYGE+F+RNLG SEL Sbjct: 245 ILEKSDNPEGY-LKTFLYPDV--NLCSQLGLQPDFIREIIRKIGNYGEIFERNLGKNSEL 301 Query: 321 KIPRGYNALWSKGGLMYAP 339 K R N W++GG++++P Sbjct: 302 KQQRRDNKPWAEGGMLWSP 320 >gi|300721866|ref|YP_003711144.1| putative Amino-acid binding protein [Xenorhabdus nematophila ATCC 19061] gi|297628361|emb|CBJ88926.1| putative Amino-acid binding protein [Xenorhabdus nematophila ATCC 19061] Length = 323 Score = 228 bits (582), Expect = 9e-58, Method: Composition-based stats. Identities = 105/320 (32%), Positives = 170/320 (53%), Gaps = 7/320 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 ++++ IK L G++ G G + N W+GFD+D +A++ A+ + KI ++P Sbjct: 4 SAVIQRIKTHNILNAGVSLGFRGLSFRDNYNSQWEGFDIDLAKAVAIAVLGNSKKINFIP 63 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L + RF AL+ ID+ N+ T E ++F FDG+ + H+ I++VS+ Sbjct: 64 LQSGNRFQALKDNIIDLGCFNSSITFQSESEYNVSFAHPMLFDGEVLMTHENNLINNVSE 123 Query: 143 LSGAS---ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 I G+TT+ L YF + + ++FE ++ AY+ C+ Y D Sbjct: 124 ARSTKKREIAAMRGSTTQENLERYFAELGLNCNIMLFESPQDAREAYQKGICNIYCLDSY 183 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L ++ + P +H+ L D IS ++PA+ D +W+ VSW A++ AE LGIT+ Sbjct: 184 LLAGERIQLEAPEKHLFLKDRISLEAMSPAVSLHDPQWHASVSWIMKALIEAENLGITRN 243 Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319 N+N +T + +FL S + LGL ++TY+IIR +GNYGE+F+RNLG S Sbjct: 244 NVNDKYNISTGY-INKFL--KPSEELCNNLGLQTEFTYKIIRELGNYGEIFERNLGKSSI 300 Query: 320 LKIPRGYNALWSKGGLMYAP 339 L R N WSKGG++Y+P Sbjct: 301 LNQERKDNKPWSKGGMLYSP 320 >gi|291619370|ref|YP_003522112.1| AapJ [Pantoea ananatis LMG 20103] gi|291154400|gb|ADD78984.1| AapJ [Pantoea ananatis LMG 20103] Length = 323 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 106/319 (33%), Positives = 162/319 (50%), Gaps = 7/319 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 +++ I++ L G++ G G ++ N W GFD+D RA++ ++ D KI ++PL Sbjct: 5 AVIKRIEQHDVLNVGVSLGFKGLSQRDPLNNSWNGFDIDLARAVAISVLGDGGKIHFIPL 64 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ- 142 + +RF AL+ ID+ + N T RE G+ F FDG+ + + Q Sbjct: 65 QSADRFQALRDGVIDLGTFNASVTFQREAEYGINFLHPMLFDGEVLMTPRSNLTEETPQA 124 Query: 143 --LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 I G+TTE L YF N+ ++F+ ++ AY + CD Y D Sbjct: 125 RFTRQRRIAAMRGSTTEENLTRYFDELNLPCEILLFDSPQQARQAYESGECDIYCLDGYL 184 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L S+H+IL D IS +APA+ D++WY W A++ AE LGITQK Sbjct: 185 LAGEHHQLTDSSQHLILDDRISLEAMAPAVSASDSQWYIATKWVMRALIEAENLGITQKT 244 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 + S + ++ FL D N+ LGL D+ IIR +GNYGE+F+RNLG SEL Sbjct: 245 FLEKSDNPEGY-LKTFLYPDV--NLCSQLGLQPDFIREIIRKIGNYGEIFERNLGKNSEL 301 Query: 321 KIPRGYNALWSKGGLMYAP 339 K R N W++GG++++P Sbjct: 302 KQQRRDNKPWAEGGMLWSP 320 >gi|71735465|ref|YP_276122.1| amino-acid binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556018|gb|AAZ35229.1| amino-acid binding protein, putative [Pseudomonas syringae pv. phaseolicola 1448A] Length = 317 Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 102/311 (32%), Positives = 167/311 (53%), Gaps = 3/311 (0%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 DIKKRG+L+ G++ GL+G + + G+W GFDVD RA+S AIF D I+Y PL + +R Sbjct: 7 DIKKRGYLRVGVSLGLIGLSSKNSEGEWSGFDVDLARAVSVAIFGDDQCIEYFPLASNDR 66 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 F ALQ ID+ N+ T RE + F FDG+ + G+S + Sbjct: 67 FDALQQNIIDLGCFNSSITFSRETISEVKFCHPMLFDGEMLMTKSAGGMSRPIVSGEIRV 126 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 G+TT L YF+ N+K +++ ++ AY C+ Y D L + Sbjct: 127 AALEGSTTGDNLNRYFREQNLKGVVHLYKTFDDARNAYNLDVCNYYCLDGYLLSGEQTKL 186 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 +HVIL +IS+ ++PA + T+ + V+W +++ +E +GI N+N + Sbjct: 187 RDSRDHVILEQMISREAMSPATLSSKTQLTSAVTWVLRSIIESENIGINSHNLNAF-YEL 245 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 N ++++L D I LG++ +T +++++GNY E+F+R+LG++S L+ R N Sbjct: 246 ENWYIRKYLHPDP--RISSKLGISPSFTADVVKNVGNYEEIFERHLGSKSILRQTRRENR 303 Query: 329 LWSKGGLMYAP 339 L S GGL+Y+P Sbjct: 304 LRSVGGLLYSP 314 >gi|320327184|gb|EFW83198.1| amino-acid binding protein, putative [Pseudomonas syringae pv. glycinea str. race 4] Length = 317 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 101/311 (32%), Positives = 167/311 (53%), Gaps = 3/311 (0%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 DIKKRG+L+ G++ GL+G + + G+W GFDVD RA+S AIF D I+Y PL + +R Sbjct: 7 DIKKRGYLRVGVSLGLIGLSSKNSEGEWSGFDVDLARAVSVAIFGDDQCIEYFPLASNDR 66 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 F ALQ ID+ N+ T RE + F FDG+ + G+S + Sbjct: 67 FDALQQNIIDLGCFNSSITFSRETISEVKFCHPMLFDGEMLMTKSAGGMSRPIVSGEIRV 126 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 G+TT L YF+ ++K +++ ++ AY C+ Y D L + Sbjct: 127 AALEGSTTGDNLNRYFREQHLKGVVHLYKTFDDARNAYNLDVCNYYCLDGYLLSGEQTKL 186 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 +HVIL +IS+ ++PA + T+ + V+W +++ +E +GI N+N + Sbjct: 187 RDSRDHVILEQMISREAMSPATLSSKTQLTSAVTWVLRSIIESENIGINSHNLNAF-YEL 245 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 N ++++L D I LG++ +T +++++GNY E+F+R+LG++S L+ R N Sbjct: 246 ENWYIRKYLHPDP--RISSKLGISPSFTADVVKNVGNYEEIFERHLGSKSILRQTRRENR 303 Query: 329 LWSKGGLMYAP 339 L S GGL+Y+P Sbjct: 304 LRSVGGLLYSP 314 >gi|320325529|gb|EFW81591.1| amino-acid binding protein, putative [Pseudomonas syringae pv. glycinea str. B076] Length = 346 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 101/311 (32%), Positives = 166/311 (53%), Gaps = 3/311 (0%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 DIKKRG+L+ G++ GL+G + + G+W GFDVD RA+S AIF D I+Y PL + +R Sbjct: 36 DIKKRGYLRVGVSLGLIGLSSKNSEGEWSGFDVDLARAVSVAIFGDDQCIEYFPLASNDR 95 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 F ALQ ID+ N+ T RE + F FDG+ + G+S + Sbjct: 96 FDALQQNIIDLGCFNSSITFSRETISEVKFCHPMLFDGEMLMTKSAGGMSRPIVSGEIRV 155 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 G+TT L YF+ N+K +++ ++ AY C+ Y D L + Sbjct: 156 AALEGSTTGDNLNRYFREQNLKGVVHLYKTFDDARNAYNLDVCNYYCLDGYLLSGEQTKL 215 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 +HVIL +IS+ ++PA + + + V+W +++ +E +GI N+N + Sbjct: 216 RDSRDHVILEQMISREAMSPATLSSKIQLTSAVTWVLRSIIESENIGINSHNLNAF-YEL 274 Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328 N ++++L D I LG++ +T +++++GNY E+F+R+LG++S L+ R N Sbjct: 275 ENWYIRKYLHPDP--RISSKLGISPSFTADVVKNVGNYEEIFERHLGSKSILRQTRRENR 332 Query: 329 LWSKGGLMYAP 339 L S GGL+Y+P Sbjct: 333 LRSVGGLLYSP 343 >gi|297192982|ref|ZP_06910380.1| ABC transporter amino acid-binding protein [Streptomyces pristinaespiralis ATCC 25486] gi|197723387|gb|EDY67295.1| ABC transporter amino acid-binding protein [Streptomyces pristinaespiralis ATCC 25486] Length = 352 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 99/321 (30%), Positives = 160/321 (49%), Gaps = 19/321 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + L K RG ++ ++ G+ G + G W G D D RA+++A +D I + Sbjct: 50 PATTATLRSAKVRGAVRVAVSQGVRGLSLRTPAGRWTGLDTDIARAVAAAALEDAEAIDW 109 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ A +R L+S + D+ N WT+ RE + + F IT +DG+GF++ G++ Sbjct: 110 VPVRATDRLRTLESGRADLTVCNLTWTMGREATGAVLFAGITCYDGEGFLVRAADGLADP 169 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+G + V G TT + L ++ ++ P+ F+ + AAY C AY D +A Sbjct: 170 ADLAGRRLAVHNGCTTVVNLESWYGPLGLEVEPVGFDDPADALAAYACGDCAAYVLDRTA 229 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + RP +H ILP IS+ P+A A+ + D W+ +V W +V AE G Sbjct: 230 LAGARACLPRPQDHRILPVSISREPMAAAVHEADPHWFRLVRWVLQLLVAAEHEGPEAA- 288 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 R + G + GL + W R++ +G YG++++RNLG S L Sbjct: 289 -------------ARL-----AGPHGPSAGLDEKWADRVLSAVGTYGDVYERNLGAASGL 330 Query: 321 KIPRGYNALWSKGGLMYAPPI 341 +PRG N LW+ GGL YA P+ Sbjct: 331 DVPRGVNELWTAGGLHYAVPL 351 >gi|193083904|gb|ACF09583.1| amino acid ABC transporter periplasmic amino acid-binding protein [uncultured marine group II euryarchaeote KM3-72-G3] Length = 470 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 114/365 (31%), Positives = 172/365 (47%), Gaps = 38/365 (10%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73 + +T S L I RG +KCG+ G + A G G D+ +CRA+++A+ Sbjct: 107 AAGIAEATPVSTLDTIVDRGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRAVAAALGL 166 Query: 74 DPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +P ++Y+P + +RF L S ID+L R T WT R+ L F + +FDGQG ++ Sbjct: 167 NPDTDVEYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVR 226 Query: 133 KKKGIS---SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 S QL+ A ICV GTTTE + D+F + N+++ + E A + Sbjct: 227 SDAYEYGTGSADQLNNAEICVGIGTTTEGNMVDWFSSRNIQFTSVPVADAAEATAKFIDG 286 Query: 190 RCDAYTGDISALYALKLTND----------RPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 CDA+TGD+SA+ A K D P I +++SK PL A D+++ + Sbjct: 287 SCDAFTGDMSAMVAKKWQLDGDASMVDDNGDPVSIWIAQELMSKEPLGAATRDMDSDFKD 346 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSK---------DTTNPDVQRFLGIDKSSNIGEALG 290 +V+W Y MVTAEE+G+T N + T++P + R L + Sbjct: 347 VVAWVWYGMVTAEEMGVTAANAADSAATACALNEGGATSDPGMCRLL-TENLGLGTATNP 405 Query: 291 LTKDWTYRIIRHMGNYGEMFDRNLGNQ-----------SELKIPRG--YNALWSKGGLMY 337 L DW ++ GNYGE +D + S I R NAL S+GG+ Y Sbjct: 406 LAGDWMQAVLATAGNYGEAYDDAFCDGTYDGVSGSDAMSGCLISRSGTLNALVSEGGIQY 465 Query: 338 APPIR 342 AP +R Sbjct: 466 APAMR 470 >gi|193083731|gb|ACF09418.1| amino acid ABC transporter periplasmic amino acid-binding protein [uncultured marine group II euryarchaeote SAT1000-15-B12] Length = 374 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 15/339 (4%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 T+ + S L I RG +KCG+ G + +G + G D+++C+AL++AI D Sbjct: 40 AAGTADAQLVSTLDTIIARGSMKCGVKDSQFGMGFLNDDGTYSGLDIEYCKALAAAIGVD 99 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK- 133 I+Y+ RF L S +ID+L R T WT R+ L F + ++DGQG +++ Sbjct: 100 --SIEYILATGSNRFELLASHEIDVLIRTTTWTTSRDAGLNADFAGMNFYDGQGMLVNTG 157 Query: 134 ---KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 G +S L GA+ICV GTTTE L DY++ + M+ I E + Sbjct: 158 PDHFPGATSALDLDGANICVGIGTTTEGNLLDYYELNQMQMTTINTENAAAAQENFLDGS 217 Query: 191 CDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 C +TGD+SA+ A I+P+++SK PL A D +W ++V+W Y M+ Sbjct: 218 CGVWTGDMSAMVARMYGLRDEGMSLAIMPELLSKEPLGAATRDNDDDWNDVVAWVWYGMI 277 Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 TAEE GI N ++ NP + R L + L+ W ++ +GNY + Sbjct: 278 TAEEFGIDGSNYMDFV-NSENPGINRLL-NSNLGLGTDDNPLSDTWMQSVLGAVGNYHDA 335 Query: 310 FDRNLGNQ----SELKIPRG--YNALWSKGGLMYAPPIR 342 +DR+ + + I R NAL S+GG+ YAPP+R Sbjct: 336 YDRSFCDGDGGMNNCLISRAGTLNALVSEGGIQYAPPMR 374 >gi|193084366|gb|ACF10022.1| amino acid ABC transporter periplasmic amino acid-binding protein [uncultured marine group II euryarchaeote AD1000-18-D2] Length = 394 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 112/356 (31%), Positives = 175/356 (49%), Gaps = 29/356 (8%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73 + +T S L I RG +KCG+ G + A G G D+ +CRA+++A+ Sbjct: 40 AAGIAEATPVSTLDTIIDRGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRAVAAALGL 99 Query: 74 DPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +P ++Y+P + +RF L S ID+L R T WT R+ L F + +FDGQG ++ Sbjct: 100 NPDTDVEYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVR 159 Query: 133 KKKGISSVSQ-----LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + ++ + L GA+ICV GTTTE + D+F + N+ + + E A + Sbjct: 160 EDAYSAAGAGNSAGGLDGANICVGIGTTTEGNMVDWFSSRNIAFTSVPVADAAEATAKFI 219 Query: 188 AHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 CDA+TGD+SA+ A K D + I +++SK PL A D+++ ++V+ Sbjct: 220 DGSCDAFTGDMSAMVAKKWQLDGDGSMNGVDIWIAQELMSKEPLGAATRDMDSDFKDVVA 279 Query: 243 WTHYAMVTAEELGITQKNINQVSK---DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 W Y MVTAEE+G+T N + D ++P + R L + A L DW + Sbjct: 280 WVWYGMVTAEEMGVTAANAADSAAAACDGSDPGMCRLL-TENLGLGTAANPLAGDWMQAV 338 Query: 300 IRHMGNYGEMFDRNLGNQ-----------SELKIPRG--YNALWSKGGLMYAPPIR 342 + GNYGE +D + + I R NAL S+GG+ YAP +R Sbjct: 339 LATAGNYGEAYDDAFCDGTYDGVSGSDAMTGCLISRSGTLNALVSEGGIQYAPAMR 394 >gi|256395455|ref|YP_003117019.1| extracellular solute-binding protein family 3 [Catenulispora acidiphila DSM 44928] gi|256361681|gb|ACU75178.1| extracellular solute-binding protein family 3 [Catenulispora acidiphila DSM 44928] Length = 321 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 100/315 (31%), Positives = 157/315 (49%), Gaps = 19/315 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L + G ++ ++ G+ G + A G W+G D D RA+++A D + +L Sbjct: 25 LAAARATGTVRAVVSRGIRGLSSPDAAGVWRGLDTDMARAVAAAAIGDGEAVSWLSTEPA 84 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R L + + D++ N WTL RE + G+ F +T +DG+GF++ GI+ +QL+G Sbjct: 85 ARLDRLVAGEADLVVSNLTWTLGRETA-GVLFAGVTCYDGEGFLVRASDGITDPAQLAGR 143 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + QAGTT+ LA +F + + PI + + A Y + C AY D AL + Sbjct: 144 QVATQAGTTSAANLAAWFGSRGLAVTPIAYPTPADALAGYASGDCAAYVLDCVALAGERA 203 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 D P EH IL IS+ P+A A+ D EW+ + W ++ AE Sbjct: 204 ALDDPGEHRILDTTISREPMAMAVRDDDAEWFRLCRWVLQFLIAAEHAE----------- 252 Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326 + R + G ALGL ++W R++ +G YG+++ RNLG S L +PRG Sbjct: 253 --DPAEAAR-----DAGRHGPALGLDENWAARVLDAVGTYGDVYARNLGPASGLDVPRGL 305 Query: 327 NALWSKGGLMYAPPI 341 NALW++GGL Y P+ Sbjct: 306 NALWTEGGLHYPMPL 320 >gi|193084292|gb|ACF09951.1| amino acid ABC transporter periplasmic amino acid-binding protein [uncultured marine group II euryarchaeote KM3-130-D10] Length = 394 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 113/356 (31%), Positives = 174/356 (48%), Gaps = 29/356 (8%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73 + +T S L I RG +KCG+ G + A G G D+ +CRA+++A+ Sbjct: 40 AAGIAEATPVSTLDTIIDRGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRAVAAALGL 99 Query: 74 DPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +P ++Y+P + +RF L S ID+L R T WT R+ L F + +FDGQG ++ Sbjct: 100 NPDTDVEYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVR 159 Query: 133 KK-----KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + +S L GA+ICV GTTTE + D+F + N+ + + E A + Sbjct: 160 EDVFPAAAAGNSAGGLDGANICVGIGTTTEGNMVDWFSSRNIAFTSVPVADAAEATAKFI 219 Query: 188 AHRCDAYTGDISALYALKLTNDRPS-----EHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 CDA+TGD+SA+ A K D + I +++SK PL A D+++ ++V+ Sbjct: 220 DGSCDAFTGDMSAMVAKKWQLDGDDSMGGVDIWIASELMSKEPLGAATRDMDSDFKDVVA 279 Query: 243 WTHYAMVTAEELGITQKNINQVSK---DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 W Y MVTAEE+G+T N + D ++P + R L + A L DW + Sbjct: 280 WVWYGMVTAEEMGVTAANAAASAAAACDGSDPGMCRLL-TENLGLGTAANPLAGDWMQAV 338 Query: 300 IRHMGNYGEMFDRNLGNQ-----------SELKIPR--GYNALWSKGGLMYAPPIR 342 + GNYGE +D + + I R NAL S+GG+ YAP +R Sbjct: 339 LATAGNYGEAYDDAFCDGTYDGVSGSAAMTGCLISRVGTLNALVSEGGIQYAPAMR 394 >gi|161170240|gb|ABX59211.1| substrate-binding protein [uncultured marine group II euryarchaeote EF100_57A08] Length = 439 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 117/351 (33%), Positives = 174/351 (49%), Gaps = 34/351 (9%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPS-KIQYLP 82 S + I +RG LKCG+ G + A G G D+ +CRAL++AI DP I+++P Sbjct: 90 STMDVILERGMLKCGVKESQYGMGYLDSATGVRSGLDISYCRALAAAIGLDPMTDIEFVP 149 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG----IS 138 ++++RF L S +ID+L R T WT R+ L F + +FDGQG ++ + Sbjct: 150 ASSQDRFEKLASGEIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILIREDTYPQGLTQ 209 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + L+ A +CV GTTTE LAD+ ++++ I E A ++ CDA+TGD+ Sbjct: 210 TATMLTSAKVCVGTGTTTEGNLADFDTSNSVGMDIIGVVDAAEGTAKLQSGECDAFTGDM 269 Query: 199 SALYALKLTNDR----------PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 SA+ A K D P I P+I+SK PL A D +W ++V+W Y M Sbjct: 270 SAMVAKKWALDNDGTVVDDNGDPVGLWIAPEILSKEPLGAATRDNDDDWNDVVAWVWYGM 329 Query: 249 VTAEELGITQKNINQVSKDTT----NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 VTAEE GIT N ++ D NP R + +A L W ++ +G Sbjct: 330 VTAEEYGITSANYMTMASDAAAEGGNPGHNRLMNT-NLGLGTDANPLADTWMQAVMGAVG 388 Query: 305 NYGEMFDRNLGNQ-----------SELKIPRG--YNALWSKGGLMYAPPIR 342 NYGE +D + + + R NAL S+GGL +APP+R Sbjct: 389 NYGEAYDDAFCDGTYDGSSGSDTMTGCLLDRAGTANALVSEGGLQFAPPMR 439 >gi|320106917|ref|YP_004182507.1| family 3 extracellular solute-binding protein [Terriglobus saanensis SP1PR4] gi|319925438|gb|ADV82513.1| extracellular solute-binding protein family 3 [Terriglobus saanensis SP1PR4] Length = 336 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 102/338 (30%), Positives = 167/338 (49%), Gaps = 7/338 (2%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 VS+L L + + L ++ G L CG+ + +G GFD+D C+A Sbjct: 4 VSLLLLAVCSSLTLGAQ-QTLQKVRAAGVLTCGVIAEDAEYNTEDDHGSRGGFDLDLCKA 62 Query: 67 LS-SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ +A+ + L+ K AL + +ID L + L +D Sbjct: 63 VAVAALGEKAQTKVITFLDDKSGVDALIAGKID-LIATLSADFSHTTNASLGESAPVLYD 121 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G GF++ +K GI+ + L+ +C A T E L +F ++ P F+ E++AA Sbjct: 122 GVGFLVLRKSGIAHAADLTHRKVCFLAETNVETALQAWFTRQHLDLLPFPFQEEGEMEAA 181 Query: 186 YRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 Y C A GD++ L + + + + +H+ILP++I+ PLA A D +W IV WT Sbjct: 182 YITKNCAAIAGDLTRLAQTRASFETQAPDHMILPEVIAADPLAFAYRSSDPQWGRIVDWT 241 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 + E LG+T NI+ +S + +P V+ LG + +G LGL++DW ++R +G Sbjct: 242 AQVLFHGEALGVTSANID-ISAKSADPAVRHLLGATHA--VGTPLGLSEDWAASVLRSVG 298 Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 NY E+FDR G S L + RG N L S+GGL+ P++ Sbjct: 299 NYREVFDRTFGEASTLSLTRGRNRLTSEGGLILPLPLK 336 >gi|323165231|gb|EFZ51021.1| general L-amino acid-binding periplasmic protein aapJ [Shigella sonnei 53G] Length = 254 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 117/253 (46%), Positives = 171/253 (67%), Gaps = 1/253 (0%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++ +L + +A L ++K+GF++CGI+ GL GF+ A+G + G Sbjct: 1 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT R+ +G+AF Sbjct: 61 DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +T +DG GF+ H K G+ S +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R Sbjct: 121 GVTDYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + RCD D S LYAL++ P+E ++LP++ISK PL P + +GD EW++ Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240 Query: 240 IVSWTHYAMVTAE 252 IV WT +AM+ AE Sbjct: 241 IVRWTLFAMLNAE 253 >gi|170516837|gb|ACB15239.1| hypothetical protein [uncultured marine group II euryarchaeote DeepAnt-15E7] Length = 393 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 111/363 (30%), Positives = 172/363 (47%), Gaps = 36/363 (9%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73 + +T S L I RG +KCG+ G + A G G D+ +CR +++A+ Sbjct: 32 AAGIAEATPVSTLDTIIARGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRGVAAALGL 91 Query: 74 DPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +P ++Y+P + +RF L S ID+L R T WT R+ L F + +FDGQG ++ Sbjct: 92 NPDTDVEYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVR 151 Query: 133 -----KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + +S S L+GA+ICV GTTTE + D+F + + + + E A + Sbjct: 152 EDAFGAEASGNSASALNGANICVGIGTTTEGNMVDWFSSRGIAFTSVPVADAAEATAKFI 211 Query: 188 AHRCDAYTGDISALYALKLTND-----------RPSEHVILPDIISKSPLAPAIIQGDTE 236 CDA+TGD+SA+ A K D I +++SK PL A D++ Sbjct: 212 DGSCDAFTGDMSAMVAKKWQLDGDASMGVDENGDAIGIWIASELMSKEPLGAATRDMDSD 271 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSK----DTTNPDVQRFLGIDKSSNIGEALGLT 292 + ++V+W Y MVTAEE+G+T N + D ++P + R L + L Sbjct: 272 FKDVVAWVWYGMVTAEEMGVTAANAAASATAACADGSDPGMCRLL-TENLGLGTATNPLA 330 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQ-----------SELKIPR--GYNALWSKGGLMYAP 339 DW ++ GNYGE +D + + I R NAL S+GG+ YAP Sbjct: 331 GDWMQAVLATAGNYGEAYDDAFCDGTYDGVSGSAAMTGCLISRVGTLNALVSEGGIQYAP 390 Query: 340 PIR 342 +R Sbjct: 391 AMR 393 >gi|329295742|ref|ZP_08253078.1| amino-acid ABC transporter-binding protein yhdW precursor [Plautia stali symbiont] Length = 216 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 94/218 (43%), Positives = 143/218 (65%), Gaps = 2/218 (0%) Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +G F + Y+DG GF+ HKK + S +L GA++C+Q GT TEL +ADYFKA+ M+Y P Sbjct: 1 MGFLFAGVNYYDGIGFLTHKKASLKSAKELDGATVCIQVGTDTELNVADYFKANKMQYTP 60 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + F+R +E A + RCD + D S LYA ++ +P + ++L ++ISK PL P + +G Sbjct: 61 VTFDRSDESAKALDSGRCDTLSSDQSQLYAQRIKLGKPDDFIVLAEVISKEPLGPVVRRG 120 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTK 293 D +W+ IV W+ +AM+ AEE+GI+ K++++++ T PD+ LG + + G+ L L Sbjct: 121 DDDWFTIVKWSLFAMLNAEEMGISSKSVDEMAAKPTTPDMAHLLGAE--GDFGKDLKLDN 178 Query: 294 DWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWS 331 Y II+ +GNY E+FDRN+G S LKI RG NALW+ Sbjct: 179 KCAYNIIKQVGNYQEVFDRNVGKDSALKIARGQNALWN 216 >gi|7381255|gb|AAF61456.1|AF139661_1 putative amino acid ABC transporter binding protein [Azospirillum brasilense] Length = 236 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 95/235 (40%), Positives = 137/235 (58%), Gaps = 4/235 (1%) Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAH 167 R+ + G+ F + FDGQGFI H+ +GI+ +S L GAS+CV TTT L D+ Sbjct: 2 QRDATFGIDFPAVYLFDGQGFIAHRAQGIARLSDLPPGASVCVIEQTTTLRNLEDWMART 61 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPL 226 +++ E +A+ H CD YT D L+A +L ++VILP+ ISK PL Sbjct: 62 GLRFRLKPVRSTEGALSAFFNHHCDLYTSDRIGLHAQRLLKAPEREDYVILPEAISKEPL 121 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIG 286 P + + W+++V W A V AEE GIT N ++ ++ +P+V+RFLG ++ +G Sbjct: 122 GPMVRPDERRWFDVVRWVFLATVLAEEKGITTANAARLKEEAQDPEVRRFLGA--TAGVG 179 Query: 287 EALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 LGL W +R++ +GNYGE+FDR+LG S L I RG N LW GGL YAPP+ Sbjct: 180 WGLGLDDGWAFRVVTQVGNYGEIFDRHLGAASPLGIDRGMNGLWMNGGLHYAPPL 234 >gi|159904020|ref|YP_001551364.1| hypothetical protein P9211_14791 [Prochlorococcus marinus str. MIT 9211] gi|159889196|gb|ABX09410.1| Hypothetical protein P9211_14791 [Prochlorococcus marinus str. MIT 9211] Length = 215 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 86/216 (39%), Positives = 130/216 (60%), Gaps = 6/216 (2%) Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ K ISS+ L ICV +GTTTE + D F+A ++ Y PI ++ + ++ A Y Sbjct: 1 MVKKNSSISSIDDLVNQPICVGSGTTTEQNINDAFEARSIPYTPIKYQDLNQVVAGYLQG 60 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 RC A T D S L A + P EH+IL DI+SK PLAPA + D + + + W Y+++ Sbjct: 61 RCAAMTSDRSQLAAARSGFSNPKEHIILKDILSKEPLAPASLGADQKLGDAMRWVIYSLI 120 Query: 250 TAEELGITQKNINQVSK----DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305 +AEE GIT+ NIN+ K + ++RFLG++ ++GE +GL + +IR GN Sbjct: 121 SAEEKGITKVNINEKLKTAKANPQLKPLRRFLGVE--GDLGEKIGLDNSFVVNVIRATGN 178 Query: 306 YGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 YGE+++R+LG S + IPRG N L+ KGG+ +PP Sbjct: 179 YGEIYNRHLGPNSNVPIPRGLNELYIKGGVQISPPF 214 >gi|260223278|emb|CBA33680.1| General L-amino acid-binding periplasmic protein aapJ [Curvibacter putative symbiont of Hydra magnipapillata] Length = 173 Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 85/175 (48%), Positives = 118/175 (67%), Gaps = 3/175 (1%) Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLA 227 M PIVFE++E + AY + RC AYT D S L + + P++HVILP++ISK PL Sbjct: 1 MNIKPIVFEKLEAAEGAYFSGRCVAYTTDASGLASTRNKVAKNPADHVILPELISKEPLG 60 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGE 287 P + +GD EW IV WT Y ++ AEE G+TQ N++ + +T +P V R LG + + G+ Sbjct: 61 PMVRRGDDEWTAIVKWTVYGLLEAEENGVTQANVDDLKANTKDPVVGRLLGT--TEDTGK 118 Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 LGL K+W R I+ GNYGE+F+RN+G +S L++PRG N LWSKGG+ YAPP+R Sbjct: 119 LLGLDKEWLARAIKTTGNYGEIFERNVGPKSPLQLPRGLNNLWSKGGVQYAPPVR 173 >gi|262165601|ref|ZP_06033338.1| amino acid ABC transporter amino acid-binding protein [Vibrio mimicus VM223] gi|262025317|gb|EEY43985.1| amino acid ABC transporter amino acid-binding protein [Vibrio mimicus VM223] Length = 166 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 82/169 (48%), Positives = 115/169 (68%), Gaps = 3/169 (1%) Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +VF+ + + A RCD T D S LYAL+L ++P ++LP+IISK PL P + Q Sbjct: 1 MVFDTAAQTSKGFDAGRCDVLTTDQSGLYALRLNLEKPDSALVLPEIISKEPLGPVVRQD 60 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTK 293 D +W+N+ W YAMV AEE GIT KN++++ K + NP+V+R LG+D G LG+ Sbjct: 61 DDKWFNVAKWVLYAMVNAEEYGITSKNVDEMMK-SDNPEVKRILGLDGPKGTG--LGIRD 117 Query: 294 DWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 DW+Y+I++ +GNYGE F+R +G+ S L+I RG NALW+ GG MYAPPIR Sbjct: 118 DWSYQIVKQVGNYGESFERTVGSGSPLQIDRGVNALWNAGGFMYAPPIR 166 >gi|218516840|ref|ZP_03513680.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli 8C-3] Length = 211 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 118/211 (55%), Positives = 167/211 (79%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + + + +A+ LGD+K +GF++CG+NTGL GFA A+G+W GFDVDFC+A++SA+F D Sbjct: 1 MALGAPAASATTLGDVKAKGFVQCGVNTGLAGFAAPDASGNWAGFDVDFCKAVASAVFGD 60 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 P+K+++ PL+A RF ALQS +ID+L+RNT W++ R+ +LGL FR + Y+DGQGF++ K Sbjct: 61 PTKVKFTPLSAANRFPALQSGEIDVLARNTTWSINRDTALGLNFRFVNYYDGQGFMVRKS 120 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + S +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++E++AAY A RCD Y Sbjct: 121 LNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLDEVNAAYDAGRCDVY 180 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSP 225 T D S LY+L+LT P EH ILP+IISK P Sbjct: 181 TTDQSGLYSLRLTLKNPDEHAILPEIISKEP 211 >gi|47079429|gb|AAT10172.1| periplasmic substrate binding protein [uncultured marine group II euryarchaeote DeepAnt-JyKC7] Length = 373 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 100/320 (31%), Positives = 156/320 (48%), Gaps = 16/320 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS-KI 78 +T S L I RG +KCG+ G + A G G D+ +CR +++A+ +P I Sbjct: 46 ATPVSTLDTIIARGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRGVAAALGLNPDTDI 105 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-----IMHK 133 +Y+P + +RF L S ID+L R T WT R+ L F + +FDGQG + Sbjct: 106 EYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVREDVFPA 165 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 +S + L+GA+ICV GTTTE + D+F + N+ + + E A + CDA Sbjct: 166 ADAGNSAAGLNGANICVGIGTTTEGNMVDWFSSRNIAFTSVPVADAAEATAKFIDGSCDA 225 Query: 194 YTGDISALYALKLTNDRPSEH-----VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 +TGD+SA+ A K D I +++SK PL A D+++ ++V+W Y M Sbjct: 226 FTGDMSAMVAKKWQLDGDDSMGGVGIWIAQELMSKEPLGAATRDMDSDFKDVVAWVWYGM 285 Query: 249 VTAEELGITQKNINQVSK---DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305 VTAEE G+T N ++ D ++P V R L + L W +++ GN Sbjct: 286 VTAEENGVTAANAADMAAAACDGSDPGVCRLL-TENLGLGTTDNPLAGTWMQAVLQAAGN 344 Query: 306 YGEMFDRNLGNQSELKIPRG 325 YGE +D + + + Sbjct: 345 YGEAYDDAFCDGTYDGVSGS 364 >gi|117618623|ref|YP_855303.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560030|gb|ABK36978.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 278 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 104/247 (42%), Gaps = 10/247 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K V L+ L S + +A L IK R L G+ T F V G++ G Sbjct: 1 MKKITSVLFSALLGLGLASGAAHAADGSLDKIKARDKLIVGVFTDKPPFGYVDEKGNYVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD D R + + D +K++++ + R LQS ++D++ N T R + F Sbjct: 61 FDTDLGRRFAKDLLGDENKVEFVAVEPASRIPFLQSDKVDLILANMTVTPER--RQVVDF 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 ++ + + L+ ++ V GTT ++ L ++ + + FE+ Sbjct: 119 TNPNLRVAVQVLVPQGSPAKQLDDLASKTLIVTTGTTADIWLTR----NHPDWKVLKFEK 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E A R DAY D L++ + P V+ + S+ P+APA+ +G+ E Sbjct: 175 NTESLQALAQGRGDAYAQDNLVLFSWA--KENPGYRVLPEKLGSEDPIAPAVKKGNIELR 232 Query: 239 NIVSWTH 245 + V+ Sbjct: 233 DWVNDRL 239 >gi|218888235|ref|YP_002437556.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218759189|gb|ACL10088.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 271 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 110/255 (43%), Gaps = 12/255 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M + V + + + T +A + DIK RG L CG+ V F + GF Sbjct: 1 MKR--LVLLAVALCVVLTGTMAHAGKIEDIKARGALVCGVKDSTVPFGYIDEQSKQIVGF 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D C+A++ + ++ + + R L +D+++ R+ + F Sbjct: 59 DIDICKAVADKLGVK---LELKTVTSATRIPMLTQGSVDMVAATMTHKFERD--DVIDFS 113 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + DGQ ++ K G+ S + L G + G+T+E + KA + + F+ Sbjct: 114 ITYFMDGQKLLVKKGGGVKSAADLKGKKVATAKGSTSEKNI----KAAQPEATVVSFDEY 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A + + +A T D + L L+ ++ P + I+ D IS P + + D+++ + Sbjct: 170 PQAFLALKQGKAEAVTTDSTILLGLRNSDPEPDKWEIVGDYISPEPYGLGLAENDSKFRD 229 Query: 240 IVSWTHYAMVTAEEL 254 +V+ T + + E Sbjct: 230 LVNRTLVDLWNSGEY 244 >gi|239826929|ref|YP_002949553.1| extracellular solute-binding protein family 3 [Geobacillus sp. WCH70] gi|239807222|gb|ACS24287.1| extracellular solute-binding protein family 3 [Geobacillus sp. WCH70] Length = 286 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 107/282 (37%), Gaps = 36/282 (12%) Query: 1 MYKDF-------FVSILCLIILFFTSFSTNASI------------------LGDIKKRGF 35 M + I L I S+ +S L IKKRG Sbjct: 1 MKRKIVWKMWITLALIALLSITALAGCSSESSTSNKGDGAKSTETSGGTNTLEKIKKRGK 60 Query: 36 LKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G+ L F G +GFD+D + L+ I D +KI+ + +K R L + Sbjct: 61 LVVGVKYDLNLFGLKNPETGKVEGFDIDIAKGLAKKILGDENKIELKEVTSKTRIPMLNN 120 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAG 153 +ID + T R+ + F + + GQ ++ K I+SV L G ++ G Sbjct: 121 GEIDAIIATMTITEERKK--EVDFSDVYFMAGQSLLVKKDSKINSVKDLKKGMTVLTAKG 178 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T+ + + + FE E A +A + DA T D + L + + Sbjct: 179 STSAQNIRKVAPE----VNVLEFENYAEAFTALKAGQGDALTTDNALLLGMAKQDPN--- 231 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + +L + ++ P A+ +GD E+ +++ + E Sbjct: 232 YRVLDETFTEEPYGIAVRKGDKEFLQVINEYLKEIKENGEYD 273 >gi|78356474|ref|YP_387923.1| extracellular solute-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218879|gb|ABB38228.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 271 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 112/256 (43%), Gaps = 12/256 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M + +++ + + F++ + +A + +IK RG L G+ +V F V N GF Sbjct: 1 MKRLLLIAV--ALGMIFSAATASAGKIEEIKDRGVLVAGVKDSVVPFGFVDENSKQLVGF 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD CR ++ + + ++ + + R + +DI + R+ + F Sbjct: 59 DVDICRYIAGQLGVE---LELKTVTSATRIPMVTQGSVDIAAATMTHKHERD--NVIDFS 113 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + DGQ ++ K GI+SV+ L G + G+T+E + KA + F+ Sbjct: 114 ITYFMDGQKILVAKDSGINSVADLKGKKVATVKGSTSEKNI----KAAQPDCRVLSFDEY 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A + + A T D + L LK ++ P + VI D IS P + + D+++ + Sbjct: 170 PQAMLALKQGKASAVTTDSTILLGLKNSDPEPEKWVIAGDYISAEPYGLGLPENDSDFRD 229 Query: 240 IVSWTHYAMVTAEELG 255 V+ M + E Sbjct: 230 FVNKALNDMWRSGEYE 245 >gi|332041717|gb|EGI78069.1| extracellular solute-binding protein [Hylemonella gracilis ATCC 19624] Length = 297 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 105/257 (40%), Gaps = 5/257 (1%) Query: 1 MYKDFFVSILCLIILFFTSF--STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K VS + + + + L IK G + G+ + +G + G Sbjct: 1 MKKHLLVSAFAVALATLAAGVQAQANDTLAKIKSSGKVVMGVRESSPPLSYTLGDGKYTG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + V+ C+ + +I + ++Y P+ + R +Q+ +DI +T R+ ++F Sbjct: 61 YHVELCQNILKSI-APGAAVEYTPVTSANRIPLVQNGTVDIECGSTTNNATRQK--DVSF 117 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 TY + I S++ L G ++ GTT+ L + + ++K+ + + Sbjct: 118 ALTTYVTEVRTAVKSTSKIKSIADLEGKTVATTTGTTSVALLRKHKRGADIKFTEVYGKD 177 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R DA+ D + L L + P + VI+ + ++ P+A + + D + Sbjct: 178 HADSFLLLESGRADAFVMDDNLLAGLIAGSKNPKDFVIVGETLNVEPIAIMVRKDDPAFK 237 Query: 239 NIVSWTHYAMVTAEELG 255 V A + + EL Sbjct: 238 KAVDDYIRAAIKSGELN 254 >gi|239909117|ref|YP_002955859.1| amino acid ABC transporter substrate binding protein precursor [Desulfovibrio magneticus RS-1] gi|239798984|dbj|BAH77973.1| amino acid ABC transporter substrate binding protein precursor [Desulfovibrio magneticus RS-1] Length = 272 Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 10/256 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M K +++L + + A L DIK RG L G+ F V GF Sbjct: 1 MRKAARLTVLACLFTLVAAMPALAGKLDDIKSRGTLVAGVKDSQRPFGFVDEKTNQIVGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D +AL++ + +K++ P+ + R L +DI++ RE + F Sbjct: 61 EIDLMQALATRL---NAKLELKPVTSSTRIPMLTQGAVDIVAATMTHKKERE--DQVDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ ++ K GI SV+ L+G + G+T+E + K I FE Sbjct: 116 ITYFMTGQKLLVKKDGGIKSVADLAGKKVGSVKGSTSEQNV----KKAQPDCTVISFETY 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + + A T D S L +K ++D+P I+ + IS P + + D+++ + Sbjct: 172 PEAFLALKQGKVQAVTTDESILVGIKNSDDKPEAWDIVGEYISPEPYGLGVAENDSDFRD 231 Query: 240 IVSWTHYAMVTAEELG 255 V+ M E Sbjct: 232 FVNAALMDMWEKGEYQ 247 >gi|258406273|ref|YP_003199015.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] gi|257798500|gb|ACV69437.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] Length = 273 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 11/261 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M K + + + + A L +IK+RG++ G+ +V F V + + GF Sbjct: 1 MRKMVLLLVAMTVTCTLALGTAWADKLEEIKERGYMVAGVKDAVVPFGYVDKDTNNIVGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C+ L+ + D ++ P+ + R L +DIL+ RE + F Sbjct: 61 DVDICKELADKLGVD---LRLKPVTSSTRIPMLAQGSVDILAATMTHKFSRE--DSIDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ ++ K ISS + L+G + G+T+E + K + + FE Sbjct: 116 TTYFMTGQKLLVKKDSDISSTADLAGKKVGTAKGSTSEKNI----KEAQPESRVLSFEGY 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A R + A T D + L LK + P ++ I+ + IS P + + ++ + + Sbjct: 172 PQAFLALRQGKVKAVTTDATILLGLKNSAPDPDKYAIVGEYISDEPYGLGVPENESNFRD 231 Query: 240 IVSWTH-YAMVTAEELGITQK 259 V+ + V E I K Sbjct: 232 FVNRSLAKMWVNGEYQEIYSK 252 >gi|295400877|ref|ZP_06810853.1| extracellular solute-binding protein family 3 [Geobacillus thermoglucosidasius C56-YS93] gi|294977140|gb|EFG52742.1| extracellular solute-binding protein family 3 [Geobacillus thermoglucosidasius C56-YS93] Length = 284 Score = 172 bits (435), Expect = 9e-41, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 113/280 (40%), Gaps = 34/280 (12%) Query: 1 MYKDF---------FVSILCLIILFFTS--------------FSTNASILGDIKKRGFLK 37 M + ++L + +L S+ + L IKKRG L Sbjct: 1 MKRKTIWKMCMALALTALLSITVLAGCGSESSTTDKGDGSTKTSSETNTLEKIKKRGKLV 60 Query: 38 CGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 G+ L F G+ +GFD+D + L+ I D +KI+ + +K R L + + Sbjct: 61 VGVKYDLNLFGLKNPETGEVEGFDIDIAKGLAKKILGDENKIELKEVTSKTRIPMLNNGE 120 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTT 155 ID + T R+ + F + + GQ ++ K I+SV L G ++ G+T Sbjct: 121 IDAIIATMTITEERKK--EVDFSDVYFMAGQSLLVKKDSKINSVKDLKKGMTVLTAKGST 178 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 + + + + + + FE E A +A + DA T D + L + + + Sbjct: 179 SAQNI----RKAAPQVNVLEFENYAEAFTALKAGQGDALTTDNALLLGMAKQDPN---YR 231 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 +L + ++ P A+ +GDTE+ +++ + E Sbjct: 232 VLDETFTEEPYGIAVRKGDTEFLQVINEYLKEIKENGEYD 271 >gi|315928341|gb|EFV07656.1| Putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 279 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 114/279 (40%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + + + + N+ L IK+ G ++ G+ F V G+ Sbjct: 1 MKKILLSVLTAFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ +F D +K+Q++ + A R L+S ++DI+ N T R Sbjct: 61 NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAE--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + K I+SV L ++ + GTT + F + + Sbjct: 119 VDFCSPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAY----FTQNYPNIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A D P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + + + K ++ K +V+ Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDEVK 268 >gi|153953344|ref|YP_001394109.1| extracellular amino acid-binding protein [Clostridium kluyveri DSM 555] gi|219853973|ref|YP_002471095.1| hypothetical protein CKR_0630 [Clostridium kluyveri NBRC 12016] gi|146346225|gb|EDK32761.1| Predicted extracellular amino acid-binding protein [Clostridium kluyveri DSM 555] gi|219567697|dbj|BAH05681.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 268 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 89/251 (35%), Gaps = 13/251 (5%) Query: 1 MYKDF--FVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K F ++ L+ + T N + DIK +G G++ G Sbjct: 1 MKKKFGILTIVIFLMGILLTGCGQTQKSNDTSWDDIKAKGKFVVGLDDSFPPMGFRDEKG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+D +A + + +++ P+ L+L +K ID++ T R+ Sbjct: 61 QIVGFDIDMAKAAAEKLGVK---VEFKPVEWDGVILSLNNKDIDVIWNGLTITEERKK-- 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F + + Q ++ K I+S LSG ++ +Q G+++E L Sbjct: 116 QIVFSKVYLQNKQIIVVQKNSTINSKKDLSGKTVGLQMGSSSEKALNADADTSKSLKEVR 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R DA D + +P + IL D I + D Sbjct: 176 KYSNNTEALLDLSQGRTDAVIVDE--VVGRYYIEKKPDLYKILDDNFGVEDYGVGIRKTD 233 Query: 235 TEWYNIVSWTH 245 T + + Sbjct: 234 TSFKEKLDEAL 244 >gi|56420512|ref|YP_147830.1| glutamine ABC transporter glutamine-binding protein [Geobacillus kaustophilus HTA426] gi|261420185|ref|YP_003253867.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y412MC61] gi|297529846|ref|YP_003671121.1| extracellular solute-binding protein family 3 [Geobacillus sp. C56-T3] gi|319766997|ref|YP_004132498.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y412MC52] gi|56380354|dbj|BAD76262.1| glutamine ABC transporter (glutamine-binding protein) [Geobacillus kaustophilus HTA426] gi|261376642|gb|ACX79385.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y412MC61] gi|297253098|gb|ADI26544.1| extracellular solute-binding protein family 3 [Geobacillus sp. C56-T3] gi|317111863|gb|ADU94355.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y412MC52] Length = 281 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 57/277 (20%), Positives = 111/277 (40%), Gaps = 31/277 (11%) Query: 1 MYKD---FFVSILCLIILFFTS-----------------FSTNASILGDIKKRGFLKCGI 40 M K +++++ +L + + + L IK+RG L G+ Sbjct: 1 MRKKAWKWWIAVALTALLSAVALTGCSTTDKGEGGTSSETAKATNTLEKIKQRGKLIVGV 60 Query: 41 NTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 L F G +GFD+D + L+ I D +KI+ + +K R L + +ID Sbjct: 61 KYDLNLFGLKNPETGKVEGFDIDIAKGLAKKILGDENKIELKEVTSKTRIPMLNNGEIDA 120 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTEL 158 + T R+ + F + + GQ ++ K I+SV L G ++ G+T+ Sbjct: 121 IIATMTITEERKK--EVDFSDVYFMAGQSLLVKKDSPINSVKDLKKGMTVLTAKGSTSAE 178 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 + + + + FE E A +A + DA T D + L+ + + + +L Sbjct: 179 NIRKVAP----QVNVLEFENYAEAFTALKAGQGDALTTDNALLWGMAKQDPN---YRVLD 231 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + ++ P A+ +GD E +++ + E Sbjct: 232 ETFTEEPYGIAVRKGDKELLQVINEYLKEIKENGEYD 268 >gi|312111273|ref|YP_003989589.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y4.1MC1] gi|311216374|gb|ADP74978.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y4.1MC1] Length = 284 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 113/280 (40%), Gaps = 34/280 (12%) Query: 1 MYKD----FFVSILCLIILFFTSFSTNAS-------------------ILGDIKKRGFLK 37 M + ++++ +L T + S L IKKRG L Sbjct: 1 MKRKTIWKMWMALALTALLSITVLAGCGSESSTTDKGDGSTKTSSETNTLEKIKKRGKLV 60 Query: 38 CGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 G+ L F G+ +GFD+D + L+ I D +KI+ + +K R L + + Sbjct: 61 VGVKYDLNLFGLKNPETGEVEGFDIDIAKGLAKKILGDENKIELKEVTSKTRIPMLNNGE 120 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTT 155 ID + T R+ + F + + GQ ++ K I+SV L G ++ G+T Sbjct: 121 IDAIIATMTITEERKK--EVDFSDVYFMAGQSLLVKKDSKINSVKDLKKGMTVLTAKGST 178 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 + + + + + + FE E A +A + DA T D + L + + + Sbjct: 179 SAQNI----RKAAPQVNVLEFENYAEAFTALKAGQGDALTTDNALLLGMAKQDPN---YR 231 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 +L + ++ P A+ +GDTE+ +++ + E Sbjct: 232 VLDETFTEEPYGIAVRKGDTEFLQVINEYLKEIKENGEYD 271 >gi|157415241|ref|YP_001482497.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 81116] gi|283956380|ref|ZP_06373860.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 1336] gi|157386205|gb|ABV52520.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 81116] gi|283792100|gb|EFC30889.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 1336] gi|307747883|gb|ADN91153.1| Surface antigen, CjaA [Campylobacter jejuni subsp. jejuni M1] gi|315932110|gb|EFV11053.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 327] Length = 279 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 115/279 (41%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++ + N+ L IK+ G ++ G+ F V G+ Sbjct: 1 MKKILLSVLTAFVVVVLAACGGNSDSKTLNSLDKIKQNGVIRIGVFGDKPPFGYVDEKGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ +F D +K+Q++ + A R L+S ++DI+ N T R Sbjct: 61 NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAE--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + K I+SV L ++ + GTT + F + + Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAY----FTQNYPDIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A D P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMAIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + + + K ++ K DV+ Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268 >gi|226938961|ref|YP_002794032.1| GltI [Laribacter hongkongensis HLHK9] gi|226713885|gb|ACO73023.1| GltI [Laribacter hongkongensis HLHK9] Length = 298 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 100/257 (38%), Gaps = 7/257 (2%) Query: 4 DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 VS L ++ + + L ++++G G + F+ + AN G+ +D Sbjct: 6 RLLVSALAASVVATPALAAELTGTLKKVQEKGEFVIGHRESSIPFSYLDANQKPVGYMMD 65 Query: 63 FCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C +++ + + + +P+ ++ R + + +DI +T +L R+ + F Sbjct: 66 ICNRIAAEVKKEAGAKGAVTRLVPVTSQTRIPLMTNGTVDIECGSTTNSLERQKQVA--F 123 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y ++ GI S+S L G + GTT++ + + K N+ + + Sbjct: 124 SVTPYITSIRMLVKADSGIKSLSDLDGKPVVTTTGTTSDRYIKQHEKGQNLNVKNVYGKD 183 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R A+ D L L + P E I+ + +S P + + D + Sbjct: 184 HADSFLMVSTGRASAFVMDDVLLAGLIANSKNPKEFSIVGETLSVEPYGVMMRKDDPQLK 243 Query: 239 NIVSWTHYAMVTAEELG 255 +V M+ + EL Sbjct: 244 AVVDRVIVGMMKSGELD 260 >gi|121611643|ref|YP_999450.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121556283|gb|ABM60432.1| extracellular solute-binding protein, family 3 [Verminephrobacter eiseniae EF01-2] Length = 296 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 98/259 (37%), Gaps = 6/259 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ + +LF + + A L I + G + V F+ + GF Sbjct: 1 MKRSVLMASMAAAVLFSATGAQAADTLAKIAESGKITLAYRESSVPFSYLDGANKPIGFS 60 Query: 61 VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 V+ A+ A+ ++ +P+ ++ R L + +D+ +T R + Sbjct: 61 VELSNAVVEAVKKKLNKPNLQVALMPVTSQNRIPLLTNGTVDLECGSTTNNSARGKDVA- 119 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F ++ G + K I + L+ ++ GTT + Y N+ ++ Sbjct: 120 -FAVNHFYTGTRLLAKKSSKIKDYADLAKKTVASTTGTTNAQVMRKYNADKNLGMDIVLG 178 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D L+ L + P+++ ++ + + P A + + D Sbjct: 179 KDHADAFLLVESDRVVAFAMDDILLFGLIANSKNPADYEVVGESLQVEPYACMLPKDDPA 238 Query: 237 WYNIVSWTHYAMVTAEELG 255 + +V T M+ + E Sbjct: 239 FKKLVDDTFIDMMKSGEFE 257 >gi|145297676|ref|YP_001140517.1| ABC-type glutamine/glutamate transporter, periplasmic binding protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142850448|gb|ABO88769.1| ABC-type glutamine/glutamate transporter, periplasmic binding protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 278 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 60/248 (24%), Positives = 103/248 (41%), Gaps = 12/248 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K V LI L S + A L IK R L G+ T F V G + G Sbjct: 1 MKKITSVLFSALIGLGLASGAAQAADGSLDKIKARDKLIVGVFTDKPPFGYVDEKGSYVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD D R + + D +K++++ + R LQS ++D++ N T R + F Sbjct: 61 FDTDLGRRFAKDLLGDENKVEFVAVEPASRIPFLQSDKVDLILANMTVTPER--REVVDF 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 ++ + + L+ ++ V GTT ++ L ++ + + FE+ Sbjct: 119 TNPNLRVAVQVLVPEGSPAKGLGDLADKTLIVTTGTTADIWLTR----NHPDWKVLKFEK 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEW 237 E A R DAY D L++ + P + +LP+ + P+APA+ +G+ E Sbjct: 175 NTESLQALAQGRGDAYAQDNLVLFSWA--KENPG-YRVLPEKLGAEDPIAPAVKKGNIEL 231 Query: 238 YNIVSWTH 245 + V+ Sbjct: 232 RDWVNERL 239 >gi|269120152|ref|YP_003308329.1| extracellular solute-binding protein family 3 [Sebaldella termitidis ATCC 33386] gi|268614030|gb|ACZ08398.1| extracellular solute-binding protein family 3 [Sebaldella termitidis ATCC 33386] Length = 283 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 106/253 (41%), Gaps = 15/253 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K F+S++ L++ + + + I+KRG L G+ T F + Sbjct: 1 MKKLLFLSLMVLVLFVSCGNKNTDDNNAKTSGEIEKIQKRGKLIVGVFTDKPPFGFINEK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFD+ + + + D +KI+++P+ A R LQS ++DI+ N T RE Sbjct: 61 NENDGFDIALAKQFAKDLLGDENKIEFVPVEAASRVPFLQSDKVDIIMANMTVTPDREKV 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + + K I S++ L G + V GTT ++ +F + Sbjct: 121 --VDFANPYMKVAIQILGNDKDNIKSLNDLKGKKLIVNKGTTADI----FFTKNYPDIEL 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + F+ E A + R A D LYA T P ++ + SP+APA+ +G Sbjct: 175 LRFDHNTEAFQALKDGRGVALAHDSLLLYAWAQT--NPGFTIVNEKLEEPSPIAPAVKKG 232 Query: 234 DTEWYNIVSWTHY 246 + E ++ Sbjct: 233 NNELREWINNELT 245 >gi|86150666|ref|ZP_01068887.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596418|ref|ZP_01099655.1| CjaA protein [Campylobacter jejuni subsp. jejuni 84-25] gi|218562598|ref|YP_002344377.1| putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85838847|gb|EAQ56115.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni CF93-6] gi|88191259|gb|EAQ95231.1| CjaA protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112360304|emb|CAL35100.1| putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315930170|gb|EFV09291.1| Putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni 305] Length = 279 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 114/279 (40%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + + + + N+ L IK+ G ++ G+ F V G+ Sbjct: 1 MKKILLSVLTAFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ +F D +K+Q++ + A R L+S ++DI+ N T R Sbjct: 61 NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAE--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + K I+SV L ++ + GTT + F + + Sbjct: 119 VDFCSPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAY----FTQNYPNIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A D P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + + + K ++ K DV+ Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268 >gi|228989782|ref|ZP_04149762.1| hypothetical protein bpmyx0001_5510 [Bacillus pseudomycoides DSM 12442] gi|228769929|gb|EEM18512.1| hypothetical protein bpmyx0001_5510 [Bacillus pseudomycoides DSM 12442] Length = 276 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 105/269 (39%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFS-----------TNASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL L + ++ IKKRG L G+ F Sbjct: 4 MKKLFVLIVFSCLFTLIVAGCGKETSKEVSKETSGGKVVDQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 G +GFDVD +AL+ I D SK+++ + +K R L++ ID + T Sbjct: 64 LKDPATGKVEGFDVDIAKALAKKILGDESKVEFKEVTSKTRIPMLKNGDIDTIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G ++ G+T+ + + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSKIKSIDDVKSGVTVLAVKGSTSTQNIREKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 AK----VLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDAN---YQVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G T+ +++ M E Sbjct: 235 GIAVQKGATDLTKVINDLLKEMKANGEYD 263 >gi|86151024|ref|ZP_01069240.1| bacterial extracellular solute-binding proteins, family 3 [Campylobacter jejuni subsp. jejuni 260.94] gi|148926105|ref|ZP_01809791.1| putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|85842194|gb|EAQ59440.1| bacterial extracellular solute-binding proteins, family 3 [Campylobacter jejuni subsp. jejuni 260.94] gi|145845584|gb|EDK22676.1| putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|284926212|gb|ADC28564.1| putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni IA3902] Length = 279 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 114/279 (40%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + + + + N+ L IK+ G ++ G+ F V G+ Sbjct: 1 MKKILLSVLTAFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ +F D +K+Q++ + A R L+S ++DI+ N T R Sbjct: 61 NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAE--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + K I+SV L ++ + GTT + F + + Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAY----FTQNYPNIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A D P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + + + K ++ K DV+ Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268 >gi|86152552|ref|ZP_01070757.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843437|gb|EAQ60647.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni HB93-13] Length = 279 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 114/279 (40%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + + + + N+ L IK+ G ++ G+ F V G+ Sbjct: 1 MKKILLSVLTTFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ +F D +K+Q++ + A R L+S ++DI+ N T R Sbjct: 61 NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPERAE--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + K I+SV L ++ + GTT + F + + Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAY----FTQNYPNIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A D P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + + + K ++ K DV+ Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268 >gi|228995972|ref|ZP_04155628.1| hypothetical protein bmyco0003_5680 [Bacillus mycoides Rock3-17] gi|229003589|ref|ZP_04161405.1| hypothetical protein bmyco0002_5620 [Bacillus mycoides Rock1-4] gi|228757631|gb|EEM06860.1| hypothetical protein bmyco0002_5620 [Bacillus mycoides Rock1-4] gi|228763745|gb|EEM12636.1| hypothetical protein bmyco0003_5680 [Bacillus mycoides Rock3-17] Length = 276 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 107/269 (39%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFS-----------TNASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL L + ++ IKKRG L G+ F Sbjct: 4 MKKLFVLIVFSCLFTLIVAGCGKETSKEVSKETSGGKVVDQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 G +GFDVD +AL+ I D SK+++ + +K R L++ ID + T Sbjct: 64 LKDPATGKVEGFDVDIAKALAKKILGDESKVEFKEVTSKTRIPMLKNGDIDTIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G ++ G+T+ + + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSKIKSIDDVKSGVTVLAVKGSTSTQNI----RK 177 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 178 KSPEAKVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDAN---YQVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G T+ +++ M E Sbjct: 235 GIAVQKGATDLTKVINDLLKEMKANGEYD 263 >gi|224824035|ref|ZP_03697143.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] gi|224603454|gb|EEG09629.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] Length = 301 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 93/255 (36%), Gaps = 6/255 (2%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 + L +I+ + + L IK+ G + G + F+ + ++ G+ + Sbjct: 8 MSAAALAVIVAHPAFAAGESGTLKKIKESGTIVLGYRDSSIPFSYLGSDQKPIGYSWEIA 67 Query: 65 RALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 A+ + + +++ + ++ R +Q+ +D+ +T R + F Sbjct: 68 NAVVERVKKELNMPNLEVKTNLVTSQTRIPLVQNGTVDLECGSTTNNPER--QQQIDFSV 125 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + K GI L G ++ V AG+T+E L M + I + + Sbjct: 126 GYFSASTRLLTRKTSGIKEFPDLKGKNVVVTAGSTSERLLRAMNAEKQMSMNVISAKDIG 185 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + R AY D L + P E V+ S + +GD E+ + Sbjct: 186 ESFLMLESGRSAAYMVDDVLLAGEIAKSKNPDEWVVTGKPQSFENYGCMMRKGDPEFKKV 245 Query: 241 VSWTHYAMVTAEELG 255 V T + + E+ Sbjct: 246 VDETIKGLFKSGEIN 260 >gi|261404399|ref|YP_003240640.1| family 3 extracellular solute-binding protein [Paenibacillus sp. Y412MC10] gi|329929709|ref|ZP_08283395.1| putative major cell-binding factor [Paenibacillus sp. HGF5] gi|261280862|gb|ACX62833.1| extracellular solute-binding protein family 3 [Paenibacillus sp. Y412MC10] gi|328935926|gb|EGG32385.1| putative major cell-binding factor [Paenibacillus sp. HGF5] Length = 269 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 56/266 (21%), Positives = 110/266 (41%), Gaps = 20/266 (7%) Query: 1 MYKDF---------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M + F ++++ ++I S + L IKKRG L G+ F Sbjct: 1 MKRRFTGTFRWSAALLALVIMLIASGCGGSGSTDTLEAIKKRGKLVAGVKYDTKLFGLQD 60 Query: 52 A-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G+ +GFD+D +AL+ I D +K++ + +K R L++ IDI+ T R Sbjct: 61 PATGNVEGFDIDIAKALAKKILGDETKVELKEVTSKTRIDMLKNGDIDIIIATMTITEER 120 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS-ICVQAGTTTELTLADYFKAHNM 169 + + F + + GQ ++ K I+ + L+ + + G+T+ + + Sbjct: 121 KE--QVDFSDVYFEAGQSLLVKKGSPITGLESLNKDTKVLTVKGSTSAQNIREKAP---- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + FE ++ A +A + DA T D S L ++ + ++ + P A Sbjct: 175 DAVILEFENYQDAFTALKAGQGDALTTDNSILLGMQQQDP---SFELVGGNFTDEPYGMA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255 I +G+ E+ V+ + + E Sbjct: 232 IKKGNPEFVKTVNELLKELKDSGEYD 257 >gi|332179316|gb|AEE15005.1| ABC-type transporter, periplasmic subunit family 3 [Thermodesulfobium narugense DSM 14796] Length = 270 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 102/258 (39%), Gaps = 20/258 (7%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGLVGFA 48 M K F+ + L+ S A + IK RG L G+ + F Sbjct: 1 MKNLKFLFLGFIVLLGFVIAGCSQQAQKPQESSAVPPDIKAIKDRGVLNVGVKYDVPKFG 60 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 G +GF++D ++ I +P K+ + + K R L + ++D++ T Sbjct: 61 YKDPKTGKVEGFEIDIAHEMAKKILGNPDKVNLIAVTPKTRGPLLDNGEVDMVIATFTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 RE F + DG ++ K GI S + L+G ++ V TT+ + KA Sbjct: 121 PEREK--SFNFSIPYFTDGVALLVKKDSGIKSFTDLNGKTVGVAQSATTKGAIEAEAKAK 178 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 +K + + F EI AA + R A++ D + LY ILPD + Sbjct: 179 GIKVNVLEFASYPEIKAALESGRVQAFSTDGAILYGYL-----DDSTTILPDRFAPQNYG 233 Query: 228 PAIIQGDTEWYNIVSWTH 245 A+ +G+ +V+ T Sbjct: 234 IAMKKGNDGLLKLVNSTL 251 >gi|57237809|ref|YP_179057.1| surface antigen, CjaA [Campylobacter jejuni RM1221] gi|205356696|ref|ZP_03223457.1| putative amino-acid transporter periplasmic solute binding protein [Campylobacter jejuni subsp. jejuni CG8421] gi|57166613|gb|AAW35392.1| surface antigen, CjaA [Campylobacter jejuni RM1221] gi|205345434|gb|EDZ32076.1| putative amino-acid transporter periplasmic solute binding protein [Campylobacter jejuni subsp. jejuni CG8421] gi|315058426|gb|ADT72755.1| Putative amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni S3] Length = 279 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 114/279 (40%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + + + + N+ L IK+ G ++ G+ F V G+ Sbjct: 1 MKKILLSVLTTFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ +F D +K+Q++ + A R L+S ++DI+ N T R Sbjct: 61 NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAE--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + K I+SV L ++ + GTT + F + + Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAY----FTQNYPNIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A D P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + + + K ++ K DV+ Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268 >gi|153951094|ref|YP_001397935.1| CjaA protein [Campylobacter jejuni subsp. doylei 269.97] gi|152938540|gb|ABS43281.1| CjaA protein [Campylobacter jejuni subsp. doylei 269.97] Length = 279 Score = 169 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 114/279 (40%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + + + + N+ L IK+ G ++ G+ F V G+ Sbjct: 1 MKKILLSVLTAFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ +F D +K+Q++ + A R L+S ++DI+ N T R Sbjct: 61 NQGYDIVLAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTETPQRAE--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + K I+SV L ++ + GTT + F + + Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAY----FTQNYPDIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A D P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + + + K ++ K DV+ Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268 >gi|52144760|ref|YP_082068.1| amino acid ABC transporter, periplasmic solute-binding protein [Bacillus cereus E33L] gi|51978229|gb|AAU19779.1| amino acid ABC transporter, periplasmic solute-binding protein [Bacillus cereus E33L] Length = 286 Score = 169 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 104/256 (40%), Gaps = 19/256 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-----------ASILGDIKKRGFLKCGINTGLVGFAE 49 M K I+ L+ + + +N + + IK+RG L + T F Sbjct: 1 MKKLLTFIIIGLLSILVVACGSNEKKTEKTSAKPSGKIEQIKERGELVVAVFTDKPPFGY 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V +G GF++D + + + D SK++++P+ A R LQS ++D + N T Sbjct: 61 VDKDGKNVGFEIDMAKRFAKDLLGDESKVKFVPVEAASRIPYLQSDKVDFVLANMTATDE 120 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ + F ++ I SV L G + V GTT ++ L K Sbjct: 121 RKKV--VDFTNPHLKVAVQVLVKDGSPIQSVKDLEGKKVIVTKGTTADIYLTKNMK---- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 I F++ E A + R DAY D L + N P H++ + +A A Sbjct: 175 NVELIKFDKNTEALQALKDGRADAYAQDNLVLLSWA--NKNPGFHLLKDKLGGDDLIAIA 232 Query: 230 IIQGDTEWYNIVSWTH 245 + +G+ E ++ V+ Sbjct: 233 VKKGNKEIHDWVNKEL 248 >gi|121612178|ref|YP_001000662.1| CjaA protein [Campylobacter jejuni subsp. jejuni 81-176] gi|167005588|ref|ZP_02271346.1| CjaA protein [Campylobacter jejuni subsp. jejuni 81-176] gi|71532927|emb|CAJ20048.1| glutamine-binding protein [Campylobacter jejuni subsp. jejuni 81-176] gi|87249126|gb|EAQ72087.1| CjaA protein [Campylobacter jejuni subsp. jejuni 81-176] Length = 279 Score = 169 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 113/279 (40%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + + + + N+ L IK+ G ++ G+ F V G+ Sbjct: 1 MKKILLSVLTTFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ +F D +K+Q++ + A R L+S ++DI+ N T R Sbjct: 61 NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPERAE--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + K I+SV L ++ + GTT + + + Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAYFTQDYP----NIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A D P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + + + K ++ K DV+ Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268 >gi|56478019|ref|YP_159608.1| putative ABC transporter, glutamate receptor [Aromatoleum aromaticum EbN1] gi|56314062|emb|CAI08707.1| putative ABC transporter, glutamate receptor [Aromatoleum aromaticum EbN1] Length = 298 Score = 169 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 101/261 (38%), Gaps = 8/261 (3%) Query: 1 MYKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M+K V LCL + + ++ L IK G + G V F+ + AN G Sbjct: 1 MHKSLTVIALCLSAAGMVAPAHAQSSGTLQKIKDTGTITVGHRESSVPFSYLDANQKPVG 60 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + +D C + A+ + +++Y P+ ++ R +Q+ ID+ +T ++ R+ + Sbjct: 61 YAMDLCAKVVDAVKTELKMPNLQVKYQPVTSQNRIPLMQNGTIDLECGSTTNSVARQQQV 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 G F + + K GI + L G + GTT++ + K + I Sbjct: 121 G--FSVAYFITSVRMGVRKDSGIDDIGDLDGKPVVTTTGTTSDELIKQNEKGRTINVKNI 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D L L + PS I+ + P + + D Sbjct: 179 YGKDHADSFLMVDSGRAAAFVMDDILLAGLIANSKNPSAFEIVGPSLRDEPYGVMVRKDD 238 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + IV T ++ + E Sbjct: 239 APFKAIVDKTLVGLMKSGEAE 259 >gi|1930092|gb|AAB51532.1| outer membrane protein [Campylobacter jejuni] Length = 279 Score = 169 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 113/279 (40%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + + + + N+ L IK+ G ++ G+ F V G+ Sbjct: 1 MKKILLSVLTTFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ +F D +K+Q++ + A R L+S ++DI+ N T R Sbjct: 61 NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPERAE--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + K I+SV L ++ + GTT + + + Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLIDKTLLLNKGTTADAYFTQDYP----NIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A D P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + + + K ++ K DV+ Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268 >gi|324324589|gb|ADY19849.1| amino acid ABC transporter, periplasmic solute-binding protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 286 Score = 168 bits (426), Expect = 9e-40, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 104/256 (40%), Gaps = 19/256 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-----------ASILGDIKKRGFLKCGINTGLVGFAE 49 M K ++ L+ + + +N + + IK+RG L + T F Sbjct: 1 MKKLLTFIMIGLLSILVVACGSNEKKTEKTSAKPSGKIEQIKERGELVVAVFTDKPPFGY 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V +G GF++D + + + D SK++++P+ A R LQS ++D + N T Sbjct: 61 VDKDGKNVGFEIDMAKRFAKDLLGDESKVKFVPVEAASRIPYLQSDKVDFVLANMTATDE 120 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ + F ++ I SV L G + V GTT ++ L K Sbjct: 121 RKKV--VDFTNPHLKVAVQVLVKDGSPIQSVKDLEGKKVIVTKGTTADIYLTKNMK---- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 I F++ E A + R DAY D L + N P H++ + +A A Sbjct: 175 NVELIKFDKNTEALQALKDGRADAYAQDNLVLLSWA--NKNPGFHLLKDKLGGDDLIAIA 232 Query: 230 IIQGDTEWYNIVSWTH 245 + +G+ E ++ V+ Sbjct: 233 VKKGNKEVHDWVNKEL 248 >gi|322421250|ref|YP_004200473.1| family 3 extracellular solute-binding protein [Geobacter sp. M18] gi|320127637|gb|ADW15197.1| extracellular solute-binding protein family 3 [Geobacter sp. M18] Length = 271 Score = 168 bits (426), Expect = 9e-40, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 93/256 (36%), Gaps = 11/256 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M K + ++ + L D+KK+G L G+ L F V + G+ Sbjct: 1 MKKLMTLFAAMALVGIMAHAALAGDTLADVKKKGVLVAGVKDSLPPFGYVDEKSREIVGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+DF + ++ + ++ P+ + R L IDI++ R + F Sbjct: 61 DIDFVKYIAKKLGVK---VELKPVTSASRMPQLMEGNIDIIAATMTKNPERAK--QIDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + S+ L G I G+T+E +A + F+ Sbjct: 116 HTYFLTGQKFITKKG-AVKSLKDLEGKKIGTAKGSTSEQNVAKAIPTA----TVLSFDDY 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A + + A T D S L + ++ I IS+ P + + D + Sbjct: 171 PQAFLALQQGKVAAVTTDESILAGILGKAPNKNKFEIPNLQISEEPYGLGMRKDDKNFVA 230 Query: 240 IVSWTHYAMVTAEELG 255 V+ T M E Sbjct: 231 FVNKTLLEMEKNGEAK 246 >gi|319792374|ref|YP_004154014.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315594837|gb|ADU35903.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 296 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 97/259 (37%), Gaps = 6/259 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ + +LF + + A L I + G + V F+ + GF Sbjct: 1 MKLSVLMASMAAAVLFTATGAQAADTLAKIAESGKITLAYRESSVPFSYLDGPNKPIGFS 60 Query: 61 VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 V+ A+ A+ ++ + + ++ R + + +D+ +T R + Sbjct: 61 VELSNAVVEAVKKKLNKPNLQVSLMAVTSQNRIPLITNGTVDLECGSTTNNTARGKDVA- 119 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F ++ G + K I + L+ ++ GTT L + Y N+ ++ Sbjct: 120 -FAVNHFYTGTRLLTKKSSKIKDYADLAKKTVASTTGTTNALVMRKYNTEKNLGMDIVLG 178 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D L+ L + P+++ ++ + + P A + + D Sbjct: 179 KDHADAFLLVESDRAVAFAMDDILLFGLIANSKNPADYEVVGESLQVEPYACMLPKDDPA 238 Query: 237 WYNIVSWTHYAMVTAEELG 255 + +V T M+ + E Sbjct: 239 FKKLVDDTFIGMMKSGEFE 257 >gi|229541938|ref|ZP_04430998.1| extracellular solute-binding protein family 3 [Bacillus coagulans 36D1] gi|229326358|gb|EEN92033.1| extracellular solute-binding protein family 3 [Bacillus coagulans 36D1] Length = 271 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 103/267 (38%), Gaps = 22/267 (8%) Query: 2 YKDFFVSILCLIILFFTSF-----------STNASILGDIKKRGFLKCGINTGLVGFAEV 50 K ++ ++ + S + + I+ RG L G+ F Sbjct: 5 KKWLAAGLVFILAAALVAGCGKSKSTGGSGSASDDPIKKIEDRGKLVVGVKYDTYLFGYK 64 Query: 51 KAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 G+ +GFDVD +A+S IF D K++ + +K R LQ+ +D++ Sbjct: 65 DPKTGNVEGFDVDIAKAISKKIFGDKVKVELKEVTSKTRIPMLQNGDVDMVVATMTI--S 122 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHN 168 + + F + + GQ ++ K I SV L G + G T+ + + Sbjct: 123 PDRKKVVDFSDVYFDAGQSLLVKKGSKIKSVKDLTKGTKVLTVKGATSGDNV----RKAA 178 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + +E +E A ++ + DA T D S LY + + + ++ +K P Sbjct: 179 PDTTVLEYENYQEAFTALKSGKGDALTTDNSILYGMAAQDSN---YQVVGGTFTKEPYGI 235 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G+T+ V+ + + E Sbjct: 236 AMKKGNTKLVKAVNKALKELKDSGEYD 262 >gi|222823699|ref|YP_002575273.1| amino acid ABC transporter, periplasmic solute-binding lipoprotein [Campylobacter lari RM2100] gi|222538921|gb|ACM64022.1| amino acid ABC transporter, periplasmic solute-binding lipoprotein [Campylobacter lari RM2100] Length = 275 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 113/246 (45%), Gaps = 9/246 (3%) Query: 1 MYKDFFVSIL-CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F +S L L ++ +N + + IK++G ++ G+ F + A G +G+ Sbjct: 1 MKKIFLLSFLMALFFGACSNSGSNENSIEKIKQQGVIRIGVFGDKPPFGYLDAQGKNQGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV F + ++ + D SKIQ++ + A R LQS ++D++ N T RE+ + F Sbjct: 61 DVYFAKRIAKELLGDESKIQFVLVEAANRVEFLQSNKVDLILANFTKTPEREVV--VDFA 118 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G + K I ++ L ++ + GTT + F + + I F++ Sbjct: 119 LPYMKVALGVVAPKNSDIKTIDDLKSKTLILNKGTTADAY----FTKNMPEIKTIKFDQN 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E AA R DA + D + L+A + P+ V++ ++ + +APA+ +GD Sbjct: 175 TETFAALIGKRGDALSHDNALLFAWA--KENPNFEVVIKELGNHDVIAPAVKKGDEAMLK 232 Query: 240 IVSWTH 245 ++ Sbjct: 233 FINNLI 238 >gi|283954532|ref|ZP_06372051.1| CjaA protein [Campylobacter jejuni subsp. jejuni 414] gi|283793936|gb|EFC32686.1| CjaA protein [Campylobacter jejuni subsp. jejuni 414] Length = 279 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 115/279 (41%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + + + + N+ L +IK+ G ++ G+ F V G+ Sbjct: 1 MKKILLSVLTAFVAVVLAACEGNSDSKTLNSLDEIKQNGVVRIGVFGDKPPFGYVDEKGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+DV + ++ +F D +K+Q++ + A R L+S ++DI+ N T R Sbjct: 61 NQGYDVVLAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAE--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + K I+SV L + + GTT + F + + Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKILLLNKGTTADAY----FTQNYPNIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A D P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAWI--KDHPDFKMGIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + + + K N+ KD DV+ Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYNETLKDHFGDDVK 268 >gi|330429988|gb|AEC21322.1| amino-acid ABC transporter binding protein precursor [Pusillimonas sp. T7-7] Length = 299 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 94/253 (37%), Gaps = 7/253 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ + L IK G + G + F+ + G+ Sbjct: 1 MKKTTITLFTALAVVATAPVYADG-RLEKIKSSGEIALGHRDSSIPFSYLDDKQQPIGYS 59 Query: 61 VDFCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D C+ A+ + D ++ +P+ + R L + +D+ ++ T R+ + Sbjct: 60 MDICKNIVEAVKEKLGMDKLNVKMVPVTSSTRIPLLANGTVDLNCGSSTNTKERQA--QV 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F P T+ F+ K I+S+ L G ++ AGT+ + + I Sbjct: 118 TFAPTTFVTATRFVAKKSSNINSLEDLKGKTVISTAGTSNIRWATGANDQQKLGMNIIPA 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + E R A+ D L L T+ PSE +I D + P A + D E Sbjct: 178 KDHAEALLTVNNGRAAAFFMDDILLAGLVATSRDPSEWMISKDAYTVEPYAIMEPKDDPE 237 Query: 237 WYNIVSWTHYAMV 249 + +V T M+ Sbjct: 238 FKKVVDDTIKGMM 250 >gi|42779689|ref|NP_976936.1| glutamine ABC transporter, glutamine-binding protein [Bacillus cereus ATCC 10987] gi|42735606|gb|AAS39544.1| glutamine ABC transporter, glutamine-binding protein [Bacillus cereus ATCC 10987] Length = 286 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 105/256 (41%), Gaps = 19/256 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-----------ASILGDIKKRGFLKCGINTGLVGFAE 49 M K I+ L+ + + +N + + +IK+RG L + T F Sbjct: 1 MKKFLTFIIIGLLSILVVACGSNEKKTEKTSAKPSGKIEEIKERGELVVAVFTDKPPFGY 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V +G GF++D + + + D SK++++P+ A R LQS ++D + N T Sbjct: 61 VDKDGKNVGFEIDMAKRFAKDLLGDESKVKFVPVEAASRIPYLQSDKVDFVLANMTATDE 120 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ + F ++ I SV L G + V GTT ++ L K Sbjct: 121 RKKV--VDFTNPHLKVAVQVLVKDGSPIQSVKDLEGKKVIVTKGTTADIYLTKNMK---- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 I F++ E A + R D+Y D L + N P H++ + +A A Sbjct: 175 NVELIKFDKNTEALQALKDGRADSYAQDNLVLLSWA--NKNPGFHLLKDKLGGDDLIAIA 232 Query: 230 IIQGDTEWYNIVSWTH 245 + +G+ E ++ V+ Sbjct: 233 VKKGNKEVHDWVNKEL 248 >gi|300856477|ref|YP_003781461.1| putative amino acid ABC transporter periplasmic solute-binding protein [Clostridium ljungdahlii DSM 13528] gi|300436592|gb|ADK16359.1| predicted ABC-type aminoacid transporter, periplasmic solute-binding component [Clostridium ljungdahlii DSM 13528] Length = 268 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 87/254 (34%), Gaps = 13/254 (5%) Query: 1 MYKDF--FVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K ++ L+ + T + DIK +G G++ G Sbjct: 1 MKKKLGILTLVIFLLGIILTGCGQGQKSSDKSWDDIKSKGQFVVGLDDSFPPMGFRDEKG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+D +A + + + + P+ L+L +K ID++ T R+ + Sbjct: 61 QIVGFDIDMAKAAAQKMGVK---VVFKPVEWDGIILSLNNKDIDVIWNGLTITDKRKKQI 117 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + + Q ++ I + LSG ++ +Q G+++E L + Sbjct: 118 A--FSKVYLQNKQIIVVRNDSNIKNKKDLSGKTVGLQMGSSSETALNSDAATAKSLKNIR 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R DA D + +P + IL D K I + D Sbjct: 176 KYSNNTEALLDLNQGRIDAVVVDE--VVGRYYLQKKPGLYKILEDNFGKEDYGVGIRKSD 233 Query: 235 TEWYNIVSWTHYAM 248 + + +M Sbjct: 234 ESFKEKLDEALDSM 247 >gi|294637494|ref|ZP_06715780.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Edwardsiella tarda ATCC 23685] gi|291089326|gb|EFE21887.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Edwardsiella tarda ATCC 23685] Length = 300 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 95/253 (37%), Gaps = 10/253 (3%) Query: 1 MYKDFFVSILCLIILFFTS----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M+K L + L + + +++ L IK+ G + G V F+ Sbjct: 1 MHKSVLTMALLALSLPLYAVADNGAADSATLAKIKQNGVIVVGHRESSVPFSYYDNKQQV 60 Query: 57 KGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ D+ A+ +A+ +++ LP+ ++ R LQ+ D +T R Sbjct: 61 VGYSQDYSNAIVAAVKKQLGLPNLQVKLLPITSQNRIPLLQNGTYDFECGSTTHNAER-- 118 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 +AF + G + K G+ L+G + V +GTT+E+ L + MK Sbjct: 119 QQQVAFSNTLFIVGTRLLTAKDSGVHDFRDLAGKPVVVTSGTTSEILLNRMNEKEGMKMR 178 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + + + R A+ D + L + +P VI+ S + + Sbjct: 179 IISAKDHGDAFRTLESGRAVAFMMDDALLAGERAKAKQPERWVIVGTPQSYEAYGCMLRK 238 Query: 233 GDTEWYNIVSWTH 245 D + +V T Sbjct: 239 DDPAFKKLVDDTI 251 >gi|152974368|ref|YP_001373885.1| extracellular solute-binding protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023120|gb|ABS20890.1| extracellular solute-binding protein family 3 [Bacillus cytotoxicus NVH 391-98] Length = 275 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 104/268 (38%), Gaps = 22/268 (8%) Query: 1 MYKDF-FVSILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGLVGFAE 49 M K F + +CL L ST+ ++ IKKRG L G+ F Sbjct: 4 MKKWFTLIVFVCLFTLIVAGCGNKQEEAKETSTSGGVVEQIKKRGKLVVGVKNDTNLFGL 63 Query: 50 VKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 KNPSTGQVEGFDVDMAKALAKRILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTITE 123 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAH 167 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 ERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTQNVRQKAPEA 181 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 ----TVLEFENYSEAFTALKAGQGDVLTTDNAILYGMAKQDAN---YEVVGKIFTNEPYG 234 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G T+ ++ + E Sbjct: 235 IAVQKGATDLTKEINDLLKEIKENGEYD 262 >gi|317153800|ref|YP_004121848.1| family 3 extracellular solute-binding protein [Desulfovibrio aespoeensis Aspo-2] gi|316944051|gb|ADU63102.1| extracellular solute-binding protein family 3 [Desulfovibrio aespoeensis Aspo-2] Length = 268 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 102/249 (40%), Gaps = 11/249 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M + V L L +F + + NA + D+K RG L CG+ + F V + G Sbjct: 1 MKRLIVVLALVLSFVFGVA-AANAGKIEDVKARGVLVCGVKDSVNLFGFVDPDTKELVGL 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D C+ ++ + + + + R L +DIL+ R+ + F Sbjct: 60 DIDVCKYIADKLGVKTE---FKVVTSSNRIPMLVQGSVDILAATMTHKFSRDE--QIDFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + DGQ ++ K GI S + L+ + G+T+E + + A I ++ Sbjct: 115 ITYFMDGQKLLVEKGAGIKSTADLANKKVGTVKGSTSEKNIKNAQPA----SQVISYDEY 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A + + A T D L LK +D P + I+ + + P + + D+++ + Sbjct: 171 PQAFMALKQGKVVAVTTDSGILAGLKAGDDNPDKWEIVGEFFASEPYGLGVPENDSKFRD 230 Query: 240 IVSWTHYAM 248 V+ M Sbjct: 231 FVNLCLNEM 239 >gi|224826757|ref|ZP_03699857.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] gi|224600977|gb|EEG07160.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] Length = 301 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 93/257 (36%), Gaps = 6/257 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + + + ++ + L IK G + G + F+ + N G+ +D Sbjct: 6 RLICTATVGALLAAPAMSAELTGTLKKIKDSGTIVIGHRDASIPFSYLDNNQQPIGYSMD 65 Query: 63 FCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + A+ D K+QY + ++ R +Q+ +DI +T L R+ + F Sbjct: 66 IAHKVVEAVKKDLKMPGLKVQYNLVTSQTRIPLVQNGTVDIECGSTTNNLERQK--QVDF 123 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G + K GI L G ++ AGTT+E + M + I + Sbjct: 124 SVGIFEIGTRLLTKKTSGIKDFPDLKGKNVVTTAGTTSERLIKAMNAEKQMGMNIISAKD 183 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R A+ D LY + P+E V+ S + +GD + Sbjct: 184 HGESFLMAESGRAVAFMMDDVLLYGEMVKARNPAEWVVTGKPQSFEIYGCMMRKGDPAFK 243 Query: 239 NIVSWTHYAMVTAEELG 255 +V A + E+ Sbjct: 244 KVVDDAIKATYKSGEIN 260 >gi|154249737|ref|YP_001410562.1| extracellular solute-binding protein [Fervidobacterium nodosum Rt17-B1] gi|154153673|gb|ABS60905.1| extracellular solute-binding protein family 3 [Fervidobacterium nodosum Rt17-B1] Length = 250 Score = 166 bits (419), Expect = 6e-39, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 95/257 (36%), Gaps = 17/257 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +++ ++L + ++ A L IK+RG L G F V GFD Sbjct: 1 MKK--FFTMVIAVLLVVLTVTSFAQTLTQIKQRGKLIVGTEPTFPPFEFVDEKNQVVGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ + ++ + L ALQ +ID+ T R + F Sbjct: 59 IDIAMELAKRLGVK---LEIVSLPFDSLIPALQQGKIDLAIAGMTITKERAKV--VDFSK 113 Query: 121 ITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q ++ K + L G + VQ GTT +L ++D + + F++ Sbjct: 114 PYFEANQAIVVRKDSKFEPKKLEDLVGQKVAVQLGTTGDLVVSDI-----TGINVVRFQK 168 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R DA D + A + I + + A+ +G+ E Sbjct: 169 FTDAFLELQNGRVDAVVLDEAPAKAYVKKFSK---FSISSIVDTGETYGIAVKKGNKELL 225 Query: 239 NIVSWTHYAMVTAEELG 255 N V+ T M + + Sbjct: 226 NFVNQTLDIMKGSGQYN 242 >gi|229101400|ref|ZP_04232144.1| hypothetical protein bcere0019_5790 [Bacillus cereus Rock3-28] gi|228682105|gb|EEL36238.1| hypothetical protein bcere0019_5790 [Bacillus cereus Rock3-28] Length = 276 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 102/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDDVKETNTKQGGAIEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSIDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDAN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 AI +G + ++ M T+ E Sbjct: 235 GIAIQKGADDLTKEINNLLKDMKTSGEYD 263 >gi|321312269|ref|YP_004204556.1| glutamine ABC transporter glutamine-binding lipoprotein [Bacillus subtilis BSn5] gi|320018543|gb|ADV93529.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus subtilis BSn5] Length = 273 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 101/260 (38%), Gaps = 23/260 (8%) Query: 1 MYKDFFVSILCLIIL-FFTSFSTNAS-----------ILGDIKKRGFLKCGINTGLVGFA 48 M K F ++++ L + + + S L IK + G+ T F Sbjct: 1 MKKIFSLALISLFAVILLAACGSKGSNGEASKESKKDTLAAIKDNDKIVFGVKTDTRLFG 60 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G+ +GFD+D + ++ I D K ++ + +K R LQ+ ID + T Sbjct: 61 LKNPSSGEIEGFDIDIAKQIAKDILGDEKKAEFKEVTSKTRIPMLQNGDIDAIVATMTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I SV L G+ + G+T+ + + Sbjct: 121 DERKK--EVDFSDVYFEAGQSLLVKKGSKIKSVEDLDKGSKVLAVKGSTSSQNIREKAPE 178 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A ++ + DA T D + LY + N + + + P Sbjct: 179 A----SVLEFENYAEAFTALKSGQGDALTTDNAILYGMADENKN---YQLTGKPFTDEPY 231 Query: 227 APAIIQGDTEWYNIVSWTHY 246 A+ +G + ++ + Sbjct: 232 GIAVKKGQSALAKEINASLK 251 >gi|315644844|ref|ZP_07897973.1| extracellular solute-binding protein family 3 [Paenibacillus vortex V453] gi|315279786|gb|EFU43087.1| extracellular solute-binding protein family 3 [Paenibacillus vortex V453] Length = 269 Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 109/266 (40%), Gaps = 20/266 (7%) Query: 1 MYKDF---------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M F +S++ ++I S N L IKKRG L G+ F Sbjct: 1 MKNRFTRKFRWSAAILSLIMMLIASGCGGSGNTDTLDAIKKRGKLVAGVKYDTKLFGLQD 60 Query: 52 A-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G+ +GFD+D +AL+ I D +K++ + +K R L++ IDI+ T R Sbjct: 61 PATGNVEGFDIDIAKALAKKILGDETKVELKEVTSKTRIDMLKNGDIDIIIATMTITEER 120 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS-ICVQAGTTTELTLADYFKAHNM 169 + + F + + GQ ++ K I+ + L+ + + G+T+ + + Sbjct: 121 KE--QVDFSDVYFEAGQSLLVKKGSPITGLESLNKDTKVLTVKGSTSAQNIREKAP---- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + FE ++ A +A + DA T D S L ++ + ++ + P A Sbjct: 175 DAVILEFENYQDAFTALKAGQGDALTTDNSILLGMQQQDP---SFELVGGNFTDEPYGMA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255 I +G+ E+ V+ M + + Sbjct: 232 IKKGNPEFVKTVNELLKEMKDSGDYD 257 >gi|229188845|ref|ZP_04315879.1| hypothetical protein bcere0002_5360 [Bacillus cereus ATCC 10876] gi|228594658|gb|EEK52443.1| hypothetical protein bcere0002_5360 [Bacillus cereus ATCC 10876] Length = 276 Score = 165 bits (417), Expect = 9e-39, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEKIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I SV + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSVDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M + E Sbjct: 235 GIAVQKGADDLTKEINTLIKDMKASGEYD 263 >gi|152985853|ref|YP_001351140.1| putative ABC transporter binding protein subunit [Pseudomonas aeruginosa PA7] gi|150961011|gb|ABR83036.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa PA7] Length = 299 Score = 165 bits (417), Expect = 9e-39, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 102/260 (39%), Gaps = 9/260 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWK 57 M ++ + L + + L + G + G V F+ + +G Sbjct: 1 MKTLVSSTLAFSLSLAIGAAQAEELSGTLKKVADNGTITLGYRDASVPFSYLGDNSGRPM 60 Query: 58 GFDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ VD L + + +++Y + ++ R +Q+ +D+ +T T R+ Sbjct: 61 GYSVDLAGKVVERLKATLGKPELRVKYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQ 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + + K GI+ L G ++ AGTT E L +Y H + + Sbjct: 121 VA--FSYGFIYVKGQLLTRKDSGIAHFDDLKGRNVVTTAGTTNERYLKNYNAEHKLGMNV 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + E ++ R A+ D + LY + +P + V++ + S+ + + + Sbjct: 179 VSAKDHGEAFQMLQSGRAVAFYMDDALLYGERAKARQPHDWVVVGEPQSREIYSCMVRKD 238 Query: 234 DTEWYNIVSWTHYAMVTAEE 253 D ++ +V+ T + + E Sbjct: 239 DPQFLALVNETLAGLYRSGE 258 >gi|218895694|ref|YP_002444105.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus G9842] gi|228899325|ref|ZP_04063588.1| hypothetical protein bthur0014_5490 [Bacillus thuringiensis IBL 4222] gi|228963737|ref|ZP_04124879.1| hypothetical protein bthur0004_6060 [Bacillus thuringiensis serovar sotto str. T04001] gi|218544001|gb|ACK96395.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus G9842] gi|228795973|gb|EEM43439.1| hypothetical protein bthur0004_6060 [Bacillus thuringiensis serovar sotto str. T04001] gi|228860356|gb|EEN04753.1| hypothetical protein bthur0014_5490 [Bacillus thuringiensis IBL 4222] Length = 276 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSIDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M + E Sbjct: 235 GIAVQKGADDLTKEINNLLKDMKASGEYD 263 >gi|163868657|ref|YP_001609866.1| amino-acid ABC transporter binding protein [Bartonella tribocorum CIP 105476] gi|161018313|emb|CAK01871.1| amino-acid ABC transporter binding protein [Bartonella tribocorum CIP 105476] Length = 301 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 98/258 (37%), Gaps = 6/258 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + I I + L IK+ G + G+ G A N + GF Sbjct: 1 MKKSLLMFIAAAAIGLTSGAHAENDTLEKIKQTGEITLGVRESS-GLAYALGNNKYVGFH 59 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + + I KI YLP+ ++ R L++K D +T + R Sbjct: 60 TEMAEHIIDDISKKIGKSIKIHYLPITSQNRIPLLKNKTYDFECGSTTNDIARSKEAA-- 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F TY + + K I S+ L+G + GTT+ + +A N+ + + + Sbjct: 118 FAYTTYVEEVRIAVKKNSNIKSLDDLNGKIVATTTGTTSVQLIRKNKRAKNIHFKVVKGK 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R DA+ D S L + PS++VIL ++S P+A + D + Sbjct: 178 DHGDSFLLLESGRADAFVMDASILAGHIAKSKNPSDYVILDTVLSVEPIACMLRLHDKNF 237 Query: 238 YNIVSWTHYAMVTAEELG 255 ++ + + E L Sbjct: 238 EQAINDSILHQIKDESLE 255 >gi|116750584|ref|YP_847271.1| extracellular solute-binding protein [Syntrophobacter fumaroxidans MPOB] gi|116699648|gb|ABK18836.1| extracellular solute-binding protein, family 3 [Syntrophobacter fumaroxidans MPOB] Length = 295 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 12/255 (4%) Query: 1 MYKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + F + ++L +T+ + S++ I++ G + G G V F + G W Sbjct: 1 MMRKLFGASAAALLLMWTANTACPAHAESVMDKIERTGKVNMGHREGAVPFGYMDEKGQW 60 Query: 57 KGFDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 GFD+D L+ A+ F + P+N K R + + +D+ +T TL RE Sbjct: 61 VGFDMDLGAELAKALETKFGKKIEYIKTPMNPKNRIPLVANGTVDVGIGSTTITLEREE- 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT-ELTLADYFKAH--NMK 170 + F + G ++ K I QL+G + V +G+T L A + Sbjct: 120 -AVDFSLPYFLTGTKLLVPKGSPIRDYRQLAGKKVGVGSGSTANIKGLQKAIDAKTIDPP 178 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 ++FE + + + DAY D + L ++ +P + ++ ++ P + Sbjct: 179 CEMVLFEDHAKGFLGLQQGKIDAYFTDEAMLAGMRAKAQKPDDWEVVAPFLTYEPYGFIL 238 Query: 231 IQGDTEWYNIVSWTH 245 + D++W + V+ T Sbjct: 239 PRDDSKWRDFVNATL 253 >gi|57506052|ref|ZP_00371975.1| glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) [Campylobacter upsaliensis RM3195] gi|57015660|gb|EAL52451.1| glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) [Campylobacter upsaliensis RM3195] Length = 277 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 62/277 (22%), Positives = 117/277 (42%), Gaps = 14/277 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + +F T+ ++ S + IK G +K G+ F V G + Sbjct: 1 MKKILLSIFTAFVAVFLTACGSSESGVNSIERIKNAGVVKIGVFGDKPPFGYVDEKGTNQ 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+D+ F + ++ + D +K++++ + A R L+S ++DI+ N T R + Sbjct: 61 GYDIIFAKRIAKELLGDENKVEFVLVEAANRVEFLKSNKVDIILANFTQTPERAE--QVD 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F G + K I SV L ++ + GTT + F ++ + F+ Sbjct: 119 FALPYMKVALGVAVPKDSEIKSVEDLKDKTLILNKGTTADAY----FTKNHADIKTLKFD 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + E AA R DA D + L+A +RP V++ ++ ++ +APA+ +GD E Sbjct: 175 QNTETFAALMDKRGDALAHDNTLLFAW--VKERPDYKVVIKELGNQDVIAPAVKKGDKEL 232 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + + AE+ K ++ K D++ Sbjct: 233 KEFIDNLII-SLAAEQF--FHKAYDESLKAHFGADIK 266 >gi|145589173|ref|YP_001155770.1| extracellular solute-binding protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047579|gb|ABP34206.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 304 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 102/253 (40%), Gaps = 9/253 (3%) Query: 1 MY-KDFFVSILCLIILFFTS--FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K+ + + + + + L IK G + G+ + + + + Sbjct: 1 MKYKNLISASVFAASFLVGAIDANAASQTLDKIKSSGAVTMGVRESSIPMSYTTGDSRFD 60 Query: 58 GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ V+ CR + + +I Y P+ ++ R +Q+ +DI T + R Sbjct: 61 GYHVEICRMILGDIKDKLGMSTLRINYQPVTSQNRVPLVQNGTVDIECGTTTNNVNRAKD 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +G F Y + + GI+S+SQL+G + GTT+ L + KA+ + + Sbjct: 121 VG--FAYTLYVEEVRIAVKANSGITSISQLAGKKVATTTGTTSVQLLRKHEKANGVNFEE 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + + + R DA+ D S L + P ++ I+ +++S P+A + + Sbjct: 179 VYGKDHADSFLLLESGRADAFVMDGSILAGNIANSKNPKDYKIVGEVLSTEPIAIMVRKD 238 Query: 234 DTEWYNIVSWTHY 246 D E+ V Sbjct: 239 DPEFKAAVDAAIT 251 >gi|228957061|ref|ZP_04118835.1| hypothetical protein bthur0005_5930 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802621|gb|EEM49464.1| hypothetical protein bthur0005_5930 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 276 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I SV + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSVDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M + E Sbjct: 235 GIAVQKGADDLTKEINTLIKDMKASGEYD 263 >gi|229068325|ref|ZP_04201628.1| hypothetical protein bcere0025_5400 [Bacillus cereus F65185] gi|228714786|gb|EEL66658.1| hypothetical protein bcere0025_5400 [Bacillus cereus F65185] Length = 273 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 1 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 60 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 61 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I SV + G + G+T+ + Sbjct: 121 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSVDDIKQGVKVLAVKGSTSTNNIRQKSPE 178 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 179 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M + E Sbjct: 232 GIAVQKGADDLTKEINTLIKDMKASGEYD 260 >gi|229177165|ref|ZP_04304554.1| hypothetical protein bcere0005_5410 [Bacillus cereus 172560W] gi|228606346|gb|EEK63778.1| hypothetical protein bcere0005_5410 [Bacillus cereus 172560W] Length = 276 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEVKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I SV + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSVDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M + E Sbjct: 235 GIAVQKGADDLTKEINTLIKDMKASGEYD 263 >gi|206967952|ref|ZP_03228908.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH1134] gi|228906387|ref|ZP_04070271.1| hypothetical protein bthur0013_5700 [Bacillus thuringiensis IBL 200] gi|228951131|ref|ZP_04113247.1| hypothetical protein bthur0006_5580 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229077953|ref|ZP_04210562.1| hypothetical protein bcere0023_6430 [Bacillus cereus Rock4-2] gi|229108249|ref|ZP_04237871.1| hypothetical protein bcere0018_5390 [Bacillus cereus Rock1-15] gi|229143367|ref|ZP_04271798.1| hypothetical protein bcere0012_5390 [Bacillus cereus BDRD-ST24] gi|206736872|gb|EDZ54019.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH1134] gi|228640174|gb|EEK96573.1| hypothetical protein bcere0012_5390 [Bacillus cereus BDRD-ST24] gi|228675265|gb|EEL30487.1| hypothetical protein bcere0018_5390 [Bacillus cereus Rock1-15] gi|228705291|gb|EEL57668.1| hypothetical protein bcere0023_6430 [Bacillus cereus Rock4-2] gi|228808541|gb|EEM55044.1| hypothetical protein bthur0006_5580 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228853299|gb|EEM98072.1| hypothetical protein bthur0013_5700 [Bacillus thuringiensis IBL 200] Length = 276 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I SV + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSVDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M + E Sbjct: 235 GIAVQKGADDLTKEINTLIKDMKASGEYD 263 >gi|291485150|dbj|BAI86225.1| glutamine ABC transporter, glutamine-binding protein [Bacillus subtilis subsp. natto BEST195] Length = 273 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 102/260 (39%), Gaps = 23/260 (8%) Query: 1 MYKDFFVSILCLIIL-FFTSFSTNAS-----------ILGDIKKRGFLKCGINTGLVGFA 48 M K F ++++ L + + S+ S L IK + G+ T F Sbjct: 1 MKKIFSLALISLFAVILLAACSSKGSNGEASKESKKDTLAAIKDNDKIVFGVKTDTRLFG 60 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G+ +GFD+D + ++ I D K ++ + +K R LQ+ ID + T Sbjct: 61 LKNPSSGEIEGFDIDIAKQIAKDILVDEKKAEFKEVTSKTRIPMLQNGDIDAIVATMTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I SV L G+ + G+T+ + + Sbjct: 121 DERKK--EVDFSDVYFEAGQSLLVKKGSKIKSVEDLDKGSKVLAVKGSTSSQNIREKAPE 178 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A ++ + DA T D + LY + N + + + P Sbjct: 179 A----SVLEFENYAEAFTALKSGQGDALTTDNAILYGMADENKN---YQLTGKPFTDEPY 231 Query: 227 APAIIQGDTEWYNIVSWTHY 246 A+ +G + ++ + Sbjct: 232 GIAVKKGQSALAKEINASLK 251 >gi|219670584|ref|YP_002461019.1| extracellular solute-binding protein family 3 [Desulfitobacterium hafniense DCB-2] gi|219540844|gb|ACL22583.1| extracellular solute-binding protein family 3 [Desulfitobacterium hafniense DCB-2] Length = 297 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 8/224 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++A L +IK+RG L+ G+ + F V ANG +GFDV+ R + + D SK++++ Sbjct: 45 SSAGSLEEIKQRGTLRIGVFSDKPPFGYVDANGQNQGFDVEIARRFAKDLLGDESKVEFV 104 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + A R L+S ++DI+ N T R + F G + I+S+ Sbjct: 105 LVEAANRVPYLESNKVDIIMANFTVTEER--KQKVDFANPYMKVALGIVSPNGALITSID 162 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G + V GTT DY ++ + +++ E A + R A D + + Sbjct: 163 QLQGQKVIVNKGTTA----QDYLTKNHPDLELLKYDQNTEAFEALKDGRGAALAHDNTEV 218 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A P V +P + S +APA+ +GDTE N ++ Sbjct: 219 LAWA--KSNPGFTVGVPTLGSTDTIAPAVKKGDTELLNWINQEL 260 >gi|115352263|ref|YP_774102.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115282251|gb|ABI87768.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 330 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 95/257 (36%), Gaps = 6/257 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + V+ L + + L I++ G + G V F+ V A+G GF D Sbjct: 37 RSLLVAACALACGASLAAEPLSGTLEKIRQAGLISIGHRETSVPFSYVDASGKVIGFSQD 96 Query: 63 FCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + +A+ +++++P+ ++ R +Q+ +D+ T R + F Sbjct: 97 LCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--F 154 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + GI L+G ++ GTT+E L + M I + Sbjct: 155 STTFFVATTRLLTRTSSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKD 214 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R AY D L ++ +P++ I+ S + + D ++ Sbjct: 215 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWAIVGTPQSSEAYGFMLRKDDPQFK 274 Query: 239 NIVSWTHYAMVTAEELG 255 +V ++ + E+ Sbjct: 275 ALVDGVLVQLMKSGEIN 291 >gi|15600275|ref|NP_253769.1| binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|116053228|ref|YP_793551.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|9951376|gb|AAG08467.1|AE004921_4 probable binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|115588449|gb|ABJ14464.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] Length = 299 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 100/259 (38%), Gaps = 10/259 (3%) Query: 3 KDFFVSILCLIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKG 58 K S L + + + L + G + G V F+ + +G G Sbjct: 2 KTLVSSTFALSLSLAIGAAQAEELSGTLKKVADNGTITLGYRDASVPFSYLGDNSGQPMG 61 Query: 59 FDVDFCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + V+ + + K++Y + ++ R +Q+ +D+ +T T R+ + Sbjct: 62 YSVELAGKVVERLKSTLGKPELKVKYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQV 121 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + + K GI+ L G ++ AGTT E L +Y H + + + Sbjct: 122 A--FSYGFIYVKGQLLTRKDSGIAHFDDLKGKNVVTTAGTTNERYLKNYNAEHKLGMNVV 179 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E ++ R A+ D + LY + +P + V++ + S+ + + + D Sbjct: 180 SAKDHGEAFQMLQSGRAVAFYMDDALLYGERAKARQPHDWVVVGEPQSREIYSCMVRKDD 239 Query: 235 TEWYNIVSWTHYAMVTAEE 253 ++ +V+ T + + E Sbjct: 240 PQFLALVNETLAGLYRSGE 258 >gi|171319564|ref|ZP_02908662.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171095209|gb|EDT40203.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 306 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 95/257 (36%), Gaps = 6/257 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + V+ L + + L I++ G + G V F+ V A+G GF D Sbjct: 13 RSLLVAACALACGASLAAEPLSGTLEKIRQAGLISIGHRETSVPFSYVDASGKVIGFSQD 72 Query: 63 FCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + +A+ +++++P+ ++ R +Q+ +D+ T R + F Sbjct: 73 LCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--F 130 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + GI L+G ++ GTT+E L + M I + Sbjct: 131 STTFFVATTRLLTRTSSGIRDFHDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKD 190 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R AY D L ++ +P++ I+ S + + D ++ Sbjct: 191 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWAIVGTPQSSEAYGFMLRKDDPQFK 250 Query: 239 NIVSWTHYAMVTAEELG 255 +V ++ + E+ Sbjct: 251 ALVDGVLVQLMKSGEIN 267 >gi|326318026|ref|YP_004235698.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374862|gb|ADX47131.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 295 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 96/257 (37%), Gaps = 6/257 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K S L + A L I G + V F+ + G GF VD Sbjct: 2 KTTLCSAALLACGLMAGAAAQADTLKKIADSGKITLAYRESSVPFSYLAGAGAPIGFSVD 61 Query: 63 FCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 A+ A+ +K ++ + ++ R + + +D+ +T R + F Sbjct: 62 ISNAVVDAVKKKLNKPDIKVELQAVTSQNRIPLVTNGTVDLECGSTTNNTARAKDVQ--F 119 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 ++ G ++ K GI + + L+ ++ GTT + Y + +N+ ++ + Sbjct: 120 AVNYFYTGTRLLVKKSWGIRNYADLAKKTVASTTGTTNAQVIRKYNRDNNLDMDIVLGKD 179 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R A+ D L+ LK P+E ++ D + P A + + D ++ Sbjct: 180 HNDSMLLVDTGRALAFAMDDILLFGLKANATNPAEWDVVGDALQVEPYACMLRKDDPQFQ 239 Query: 239 NIVSWTHYAMVTAEELG 255 +V+ M+ + E Sbjct: 240 ALVNGVIGGMMKSGEFE 256 >gi|229074424|ref|ZP_04207456.1| hypothetical protein bcere0024_5440 [Bacillus cereus Rock4-18] gi|228708708|gb|EEL60849.1| hypothetical protein bcere0024_5440 [Bacillus cereus Rock4-18] Length = 276 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 103/269 (38%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDDVKETNTKQSRAIEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSIDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDAN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M T+ E Sbjct: 235 GIAVQKGADDLTKEINNLLKDMKTSGEYD 263 >gi|323697540|ref|ZP_08109452.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. ND132] gi|323457472|gb|EGB13337.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans ND132] Length = 268 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 102/249 (40%), Gaps = 11/249 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M + + L L +F + + L D+K +G L CG+ + F V N GF Sbjct: 1 MKRLVLILALVLSFVFAANAAFAGK-LEDVKAKGVLVCGVKDSVNLFGFVDPNTKELVGF 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C+ ++ I + + +K R L +D+L+ R+ + F Sbjct: 60 DVDICKYIADKIGVKTE---FKVVTSKNRIPMLAQGSVDMLAATMTHKFSRDE--QIDFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + DGQ ++ K GI+S + L+ + G+T+E + KA I ++ Sbjct: 115 ITYFMDGQKLLVEKGSGITSTADLANKKVGTVKGSTSEKNI----KAAQPAAQVISYDEY 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A + + A T D L LK +D P + I+ S P + Q D+E+ + Sbjct: 171 PQAFMALKQGKVKAVTTDSGILAGLKAGDDNPEKWEIVGAFFSSEPYGLGVPQNDSEFRD 230 Query: 240 IVSWTHYAM 248 V+ M Sbjct: 231 FVNKCLNEM 239 >gi|168240514|ref|ZP_02665446.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194450029|ref|YP_002044700.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194408333|gb|ACF68552.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205339899|gb|EDZ26663.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 302 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 93/262 (35%), Gaps = 11/262 (4%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 4 RKLTTAMLAMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63 Query: 58 GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 64 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + G + K I L G ++ V +GTT+E+ L + M Sbjct: 124 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 241 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 D E+ ++ T T+ E Sbjct: 242 DPEFKKLMDDTIAQAQTSGEAE 263 >gi|121393|sp|P27676|GLNH_BACST RecName: Full=Glutamine-binding protein; Short=GlnBP; Flags: Precursor gi|142989|gb|AAA22484.1| glutamine-binding protein [Geobacillus stearothermophilus] Length = 262 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 56/271 (20%), Positives = 105/271 (38%), Gaps = 36/271 (13%) Query: 1 MYKD----FFVSILCLIILFFTSFS---------------------TNASILGDIKKRGF 35 M + ++++ + +L T+ + + L IKKRG Sbjct: 1 MKRKTVWKIWITLALIALLSITALAGCSSESSTTNKEDGAKSTETSAGTNTLEKIKKRGK 60 Query: 36 LKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G+ L F G +GFD+D + L+ I D +KI+ + +K R L + Sbjct: 61 LIVGVKYDLNLFGLKNPETGKVEGFDIDIAKGLAKKILGDENKIELKEVTSKTRIPMLNN 120 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAG 153 +ID + T R+ + F + + GQ ++ K I+SV L G ++ G Sbjct: 121 GEIDAIIGTMTITEERKK--EVDFSDVYFMAGQSLLVKKDSKINSVKDLKKGMTVLTAKG 178 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T+ + + + FE E A +A + DA T D + L+ + + Sbjct: 179 STSAQNIRKVAPE----VNVLEFENYAEAFTALKAGQGDALTTDNALLWGMAKQDPN--- 231 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + +L + SK P + + ++ T Sbjct: 232 YRVLDETFSKEPYGIGSAKETKNYCKSLTNT 262 >gi|1813949|emb|CAA71822.1| cjaA [Campylobacter jejuni] Length = 279 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 111/279 (39%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +F + N+ L IK+ G ++ G+ F V G Sbjct: 1 MKKMLLSIFTTFVAVFLAACGGNSDSGASNSLERIKQDGVVRIGVFGDKPPFGYVDEKGV 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ + D +K+Q++ + A R L+S ++DI+ N T R Sbjct: 61 NQGYDIVLAKRIAKELLGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPERAE--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + + ISS+ L ++ + GTT + F + Sbjct: 119 VDFCLPYMKVALGVAVPQDSNISSIEDLKDKTLLLNKGTTADAY----FTKEYPDIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A + P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALIDQRGDALSHDNTLLFAW--VKEHPEFKMAIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + + E K ++ K DV+ Sbjct: 233 ELKEFIDNLITKL---GEEQFFHKAYDETLKSHFGDDVK 268 >gi|310639894|ref|YP_003944652.1| abc transporter, periplasmic glutamine-binding protein [Paenibacillus polymyxa SC2] gi|309244844|gb|ADO54411.1| ABC transporter, periplasmic glutamine-binding protein [Paenibacillus polymyxa SC2] Length = 276 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 57/273 (20%), Positives = 110/273 (40%), Gaps = 27/273 (9%) Query: 1 MYKDF------FVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGL 44 M K F V++ CL++L A+ L IK+RG L G+ Sbjct: 1 MRKRFQWSTLVLVALTCLLVLAGCGGKQEAATSGNEAAASNGLEAIKQRGKLVVGVKYDT 60 Query: 45 VGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F +G +GFD+D +A++ IF D +K++ + +K R LQ+ ID + Sbjct: 61 KLFGLKDPASGKVEGFDIDIAKAVAKHIFGDETKLELKEVTSKTRITLLQNGDIDAIIAT 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLAD 162 + R+ + F + + GQ ++ K I+ + L + G+T+ + + Sbjct: 121 MTISDERKK--QVDFSDVYFNAGQSLLVKKGSPITGLESLTPDTKVLAVKGSTSAKNIRE 178 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 + FE ++ A +A + A T D S L ++ + + ++ + Sbjct: 179 KAPKA----TILEFENYQDAFNALKAGKGQALTTDNSILLGMQQQDPN---YTLVGGNFT 231 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + P A+ +G TE ++ T + + E Sbjct: 232 EEPYGIAVKKGQTELLQAINDTIKELKSNGEYD 264 >gi|222094394|ref|YP_002528453.1| ABC transporter , substrate-binding protein; glutamine-binding protein [Bacillus cereus Q1] gi|229194958|ref|ZP_04321739.1| hypothetical protein bcere0001_5370 [Bacillus cereus m1293] gi|221238451|gb|ACM11161.1| ABC transporter, substrate-binding protein; probable glutamine-binding protein [Bacillus cereus Q1] gi|228588526|gb|EEK46563.1| hypothetical protein bcere0001_5370 [Bacillus cereus m1293] Length = 276 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M + E Sbjct: 235 GIAVQKGADDLTKEINNLIKDMKASGEYD 263 >gi|32266237|ref|NP_860269.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter hepaticus ATCC 51449] gi|32262287|gb|AAP77335.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter hepaticus ATCC 51449] Length = 275 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 15/256 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K + ++ ++ N S L +IK++G ++ G+ + F + G Sbjct: 1 MKKLLLALFGVVFMIGLSACGDNQSTKESKNALEEIKQKGVVRIGVFSDKPPFGFINEKG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFDV + ++ + D +K++++ A R L+S ++DI+ N T RE Sbjct: 61 QNDGFDVYIAKRIAKDLLGDENKVEFVLTEAASRVEFLRSNKVDIIMANFTQTPEREAV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F G I I S+ L G + V GTT + +F + + Sbjct: 120 -VDFAKPYMKVALGVISPNG-EIKSIDDLKGKKLIVNKGTTADA----FFSKNYPDIELL 173 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +E+ E A + R DA D + L A + + +V +P + + +APAI +G+ Sbjct: 174 KYEQNTEAFLALKDKRGDALAHDNTLLLAWAM--ENEGFNVGIPTLGEEENIAPAIKKGN 231 Query: 235 TEWYNIVSWTHYAMVT 250 E N + ++ Sbjct: 232 IELKNWLDNEITSLTH 247 >gi|228919494|ref|ZP_04082858.1| hypothetical protein bthur0011_5190 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840137|gb|EEM85414.1| hypothetical protein bthur0011_5190 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 276 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 102/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDFFVSIL-CLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + I CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFMLIIFSCLFVLVVAGCGSKKDEAKETNTKQGRAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I SV + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSVDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M + E Sbjct: 235 GIAVQKGADDLTKEINTLIKDMKASGEYD 263 >gi|224372632|ref|YP_002607004.1| extracellular solute-binding protein, family 3 [Nautilia profundicola AmH] gi|223588682|gb|ACM92418.1| extracellular solute-binding protein, family 3 [Nautilia profundicola AmH] Length = 260 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 102/249 (40%), Gaps = 15/249 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + ++ +F T+ +A +L D++ RG LK G+ F V + G GFD Sbjct: 1 MKKLF--AFFVILGMFLTT--ASADLLKDVQSRGVLKAGVKYDFPPFGYVNSKGQVVGFD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + P + + +K R +QS IDI + + + R++ + F Sbjct: 57 IDLIKYIAKKLGVKP---VFTQVTSKTRIPMVQSGTIDIAAASMTHKVKRDLP--IDFTI 111 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 YFDGQ + K S +G + V G T+ D FK + F+ Sbjct: 112 SYYFDGQSILARKDCKAKSYKDFAGKRVGVIQGATS----GDNFKRVCPGVKLVYFQEYP 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + + DA + D + + + ++ + P + + ++ + + Sbjct: 168 QAVMALKRGKIDAVSTDYTWCATQAKNSH--GQFKVVGKPFTFEPYGMGVRENESNFRDA 225 Query: 241 VSWTHYAMV 249 V++ V Sbjct: 226 VNFAIQDAV 234 >gi|206978156|ref|ZP_03239038.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus H3081.97] gi|206743628|gb|EDZ55053.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus H3081.97] Length = 276 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M + E Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKASGEYD 263 >gi|228970759|ref|ZP_04131399.1| hypothetical protein bthur0003_5460 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228788884|gb|EEM36823.1| hypothetical protein bthur0003_5460 [Bacillus thuringiensis serovar thuringiensis str. T01001] Length = 273 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 1 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 60 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 61 LKNPSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 121 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSIDDIKQGVKVLAVKGSTSTNNIRQKSPE 178 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 179 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M E Sbjct: 232 GIAVQKGADDLTKEINSLLKDMKANGEYD 260 >gi|228937878|ref|ZP_04100506.1| hypothetical protein bthur0008_5540 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228977334|ref|ZP_04137729.1| hypothetical protein bthur0002_5490 [Bacillus thuringiensis Bt407] gi|228782311|gb|EEM30494.1| hypothetical protein bthur0002_5490 [Bacillus thuringiensis Bt407] gi|228821784|gb|EEM67784.1| hypothetical protein bthur0008_5540 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938356|gb|AEA14252.1| glutamine-binding protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 276 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSIDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M E Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYD 263 >gi|16079797|ref|NP_390621.1| glutamine ABC transporter glutamine-binding lipoprotein [Bacillus subtilis subsp. subtilis str. 168] gi|221310680|ref|ZP_03592527.1| glutamine ABC transporter (glutamine-binding protein) [Bacillus subtilis subsp. subtilis str. 168] gi|221315003|ref|ZP_03596808.1| glutamine ABC transporter (glutamine-binding protein) [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319924|ref|ZP_03601218.1| glutamine ABC transporter (glutamine-binding protein) [Bacillus subtilis subsp. subtilis str. JH642] gi|221324205|ref|ZP_03605499.1| glutamine ABC transporter (glutamine-binding protein) [Bacillus subtilis subsp. subtilis str. SMY] gi|81555988|sp|O34563|GLNH_BACSU RecName: Full=ABC transporter glutamine-binding protein glnH; Flags: Precursor gi|2635189|emb|CAB14685.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus subtilis subsp. subtilis str. 168] gi|28375453|emb|CAA93318.1| glutamine-binding subunit [Bacillus subtilis subsp. subtilis str. 168] Length = 273 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 101/260 (38%), Gaps = 23/260 (8%) Query: 1 MYKDFFVSILCLIIL-FFTSFSTNAS-----------ILGDIKKRGFLKCGINTGLVGFA 48 M K F ++++ L + + + S L IK + G+ T F Sbjct: 1 MKKIFSLALISLFAVILLAACGSKGSNGEASKESKKDTLAAIKDNDKIVFGVKTDTRLFG 60 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G+ +GFD+D + ++ I D K Q+ + +K R LQ+ ID + T Sbjct: 61 LKNPSSGEIEGFDIDIAKQIAKDILGDEKKAQFKEVTSKTRIPMLQNGDIDAIVATMTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I SV L G+ + G+T+ + + Sbjct: 121 EERKK--EVDFSDVYFEAGQSLLVKKGSKIKSVENLGKGSKVLAVKGSTSSQNIREKAPE 178 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A ++ + DA T D + LY + N + + + P Sbjct: 179 A----SVLEFENYAEAFTALKSGQGDALTTDNAILYGMADENKN---YQLTGKPFTDEPY 231 Query: 227 APAIIQGDTEWYNIVSWTHY 246 A+ +G + ++ + Sbjct: 232 GIAVKKGQSALAKEINASLK 251 >gi|42779786|ref|NP_977033.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus ATCC 10987] gi|52144672|ref|YP_082157.1| glytamine ABC transporter substrate-binding protein [Bacillus cereus E33L] gi|42735703|gb|AAS39641.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus ATCC 10987] gi|51978141|gb|AAU19691.1| ABC transporter, substrate-binding protein; probable glutamine-binding protein [Bacillus cereus E33L] Length = 276 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M + E Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKASGEYD 263 >gi|302339794|ref|YP_003805000.1| extracellular solute-binding protein family 3 [Spirochaeta smaragdinae DSM 11293] gi|301636979|gb|ADK82406.1| extracellular solute-binding protein family 3 [Spirochaeta smaragdinae DSM 11293] Length = 266 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 103/283 (36%), Gaps = 28/283 (9%) Query: 1 MYKDFFVSILCL----IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + F+ S++ L +LF ++S + I+ +G L G++ + + Sbjct: 1 MKRIFWFSLILLISSGALLFAGGDKESSSDIDAIRDKGVLVVGLDDSFPPMGFRDESNEI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D + + + +++ P++ L+L ID++ T R + Sbjct: 61 VGFDIDLAKEAAKRLGVK---VEFKPVDWDGVILSLNKGDIDVVWNGMSITESR--MEKI 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + Q ++ K I S L G + +Q G+++E+ L +Y + + Sbjct: 116 NFSKPYLDNRQIIVVPKGSAIKEKSDLVGKVVGLQMGSSSEVALNNYAEVAASLGDVKKY 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E A R DA D + + RP + ++ D I + D + Sbjct: 176 SNNVEALLDLAAGRTDAVIVDE--IVGRYYISKRPGIYQVIGDDFGSETYGVGIRKSDVK 233 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLG 278 + +++ D + ++ Q++ G Sbjct: 234 LKQELDKVL----------------DEMKADGSADEISQKWFG 260 >gi|156934833|ref|YP_001438749.1| glutamate and aspartate transporter subunit [Cronobacter sakazakii ATCC BAA-894] gi|156533087|gb|ABU77913.1| hypothetical protein ESA_02680 [Cronobacter sakazakii ATCC BAA-894] Length = 316 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 92/251 (36%), Gaps = 10/251 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 + ++L + + + + +AS L IK G + G V F+ G Sbjct: 19 RKLTAAMLVMGLSAGLAHAEDASSGQSTLDKIKANGVIVVGHRESSVPFSYYDNQQKVVG 78 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D+ A+ A+ +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 79 YSQDYSNAIVEAVKKQLNKPDLQVKMIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA 138 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + G ++ K I L G ++ V +GTT+E+ L M I Sbjct: 139 A--FSDTIFVVGTRLLVKKGGPIKDFPDLKGKAVVVTSGTTSEVLLHKLNDEKKMDMRII 196 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D + L + +P I+ SK + +GD Sbjct: 197 SAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGTPQSKEAYGCMLRKGD 256 Query: 235 TEWYNIVSWTH 245 + +V T Sbjct: 257 ESFKKLVDETI 267 >gi|324324679|gb|ADY19939.1| glytamine ABC transporter substrate-binding protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 276 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLIVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M + E Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKASGEYD 263 >gi|293397296|ref|ZP_06641568.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] gi|291420214|gb|EFE93471.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] Length = 298 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 90/257 (35%), Gaps = 6/257 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L + L IK G + G V F+ G+ Sbjct: 3 MRKLALSLLLIGMASSVAHAEELTGTLKKIKDNGVIVVGHRESSVPFSYYDNQRKVVGYS 62 Query: 61 VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 D+ + AI +++ +P+ ++ R LQ+ D +T + R+ Sbjct: 63 QDYSNQIVEAIKKQLNAPDLQVKMMPITSQNRIPLLQNGTFDFECGSTTNNIERQKQAA- 121 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G ++ K + L+G ++ V +GTT+E+ L M I Sbjct: 122 -FSDTIFVVGTRLLVKKGSEVKDFKDLAGKAVVVTSGTTSEVLLNKLNDKDKMNMRIISA 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D + L + +P + I+ SK + + D + Sbjct: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDQWQIIGTAQSKEAYGCMLRKDDPQ 240 Query: 237 WYNIVSWTHYAMVTAEE 253 + +V T T+ E Sbjct: 241 FKKLVDDTIAQAQTSGE 257 >gi|62179263|ref|YP_215680.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224582500|ref|YP_002636298.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62126896|gb|AAX64599.1| ABC superfamily (bind_prot), glutamate/aspartate transporter [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224467027|gb|ACN44857.1| ABC transporter periplasmic binding protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322713729|gb|EFZ05300.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 308 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 93/262 (35%), Gaps = 11/262 (4%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 10 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 69 Query: 58 GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 70 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 129 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + G + K I L G ++ V +GTT+E+ L + M Sbjct: 130 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLRGKAVVVTSGTTSEILLHKLNEEQKMGMRI 187 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 188 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 247 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 D E+ ++ T T+ E Sbjct: 248 DPEFKKLMDDTIAQAQTSGEAE 269 >gi|16764042|ref|NP_459657.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56414206|ref|YP_151281.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197363130|ref|YP_002142767.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|16419178|gb|AAL19616.1| glutamate/aspartate transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56128463|gb|AAV77969.1| ABC transporter periplasmic binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094607|emb|CAR60128.1| ABC transporter periplasmic binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|326622408|gb|EGE28753.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 308 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 93/262 (35%), Gaps = 11/262 (4%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 10 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 69 Query: 58 GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 70 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 129 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + G + K I L G ++ V +GTT+E+ L + M Sbjct: 130 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 187 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 188 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 247 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 D E+ ++ T T+ E Sbjct: 248 DPEFKKLMDDTIAQAQTSGEAE 269 >gi|229159720|ref|ZP_04287729.1| hypothetical protein bcere0009_5230 [Bacillus cereus R309803] gi|228623745|gb|EEK80562.1| hypothetical protein bcere0009_5230 [Bacillus cereus R309803] Length = 276 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAIEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSIDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M E Sbjct: 235 GIAVQKGAEDLTKEINSLLKDMKANGEYD 263 >gi|30018825|ref|NP_830456.1| glutamine-binding protein [Bacillus cereus ATCC 14579] gi|229126071|ref|ZP_04255093.1| hypothetical protein bcere0015_5340 [Bacillus cereus BDRD-Cer4] gi|29894367|gb|AAP07657.1| Glutamine-binding protein [Bacillus cereus ATCC 14579] gi|228657393|gb|EEL13209.1| hypothetical protein bcere0015_5340 [Bacillus cereus BDRD-Cer4] Length = 276 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSEIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M E Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKENGEYD 263 >gi|161615117|ref|YP_001589082.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550797|ref|ZP_02344553.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168231680|ref|ZP_02656738.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168264402|ref|ZP_02686375.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465842|ref|ZP_02699724.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820210|ref|ZP_02832210.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443341|ref|YP_002039908.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194469057|ref|ZP_03075041.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197248012|ref|YP_002145641.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262383|ref|ZP_03162457.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198241916|ref|YP_002214653.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389609|ref|ZP_03216220.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|238911616|ref|ZP_04655453.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|20141451|sp|Q9ZF60|GLTI_SALTY RecName: Full=Glutamate/aspartate periplasmic-binding protein; Flags: Precursor gi|161364481|gb|ABX68249.1| hypothetical protein SPAB_02884 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402004|gb|ACF62226.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194455421|gb|EDX44260.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195631794|gb|EDX50314.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197211715|gb|ACH49112.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240638|gb|EDY23258.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197936432|gb|ACH73765.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602054|gb|EDZ00600.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205324274|gb|EDZ12113.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205334029|gb|EDZ20793.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205343265|gb|EDZ30029.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347107|gb|EDZ33738.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|312911697|dbj|BAJ35671.1| glutamate/aspartate ABC transporter substrate binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320084938|emb|CBY94727.1| Membrane-bound lytic murein transglycosylase F Murein lyase F; Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226244|gb|EFX51295.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613209|gb|EFY10152.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621277|gb|EFY18134.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623697|gb|EFY20535.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628969|gb|EFY25748.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631691|gb|EFY28445.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637573|gb|EFY34275.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641913|gb|EFY38543.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646757|gb|EFY43263.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651458|gb|EFY47838.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653091|gb|EFY49425.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658811|gb|EFY55066.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664919|gb|EFY61112.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668921|gb|EFY65073.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670573|gb|EFY66706.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675314|gb|EFY71390.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682215|gb|EFY78240.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684956|gb|EFY80953.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323193986|gb|EFZ79188.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197922|gb|EFZ83044.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202031|gb|EFZ87091.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207164|gb|EFZ92117.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210929|gb|EFZ95792.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214309|gb|EFZ99060.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219286|gb|EGA03777.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225503|gb|EGA09733.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231062|gb|EGA15178.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234106|gb|EGA18195.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238199|gb|EGA22257.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242567|gb|EGA26591.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248456|gb|EGA32390.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251329|gb|EGA35201.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323259257|gb|EGA42900.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262142|gb|EGA45704.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264846|gb|EGA48347.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272317|gb|EGA55724.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 302 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 93/262 (35%), Gaps = 11/262 (4%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 4 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63 Query: 58 GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 64 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + G + K I L G ++ V +GTT+E+ L + M Sbjct: 124 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 241 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 D E+ ++ T T+ E Sbjct: 242 DPEFKKLMDDTIAQAQTSGEAE 263 >gi|170702494|ref|ZP_02893375.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170132604|gb|EDT01051.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 306 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 95/261 (36%), Gaps = 6/261 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + V+ L + + L I++ G + G V F+ V A+G GF D Sbjct: 13 RSLLVAACALACGASLAAEPLSGTLEKIRQAGLISIGHRETSVPFSYVDASGKVIGFSQD 72 Query: 63 FCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + +A+ +++++P+ ++ R +Q+ +D+ T R + F Sbjct: 73 LCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--F 130 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + GI L+G ++ GTT+E L + + I + Sbjct: 131 STTFFVATTRLLTRTSSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKLNMQIISAKD 190 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R AY D L ++ +P++ I+ S + + D ++ Sbjct: 191 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWAIVGTPQSSEAYGFMLRKDDPQFK 250 Query: 239 NIVSWTHYAMVTAEELGITQK 259 +V ++ + E+ Sbjct: 251 ALVDGVLVQLMKSGEINAQYD 271 >gi|308067189|ref|YP_003868794.1| Glutamine-binding protein precursor (GlnBP) [Paenibacillus polymyxa E681] gi|305856468|gb|ADM68256.1| Glutamine-binding protein precursor (GlnBP) [Paenibacillus polymyxa E681] Length = 276 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 111/273 (40%), Gaps = 27/273 (9%) Query: 1 MYKDF------FVSILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGL 44 M K F V++ CL++L A L IK+RG L G+ Sbjct: 1 MRKRFQWSTLVLVALSCLLVLAGCGGKEGAATSGNEPAAAKGLEAIKQRGKLVVGVKYDT 60 Query: 45 VGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F +G +GFD+D +A++ IF D +K++ + +K R LQ+ ID + Sbjct: 61 KLFGLKDPASGKVEGFDIDIAKAVAKHIFGDETKLELKEVTSKTRITLLQNGDIDAIIAT 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLAD 162 + R+ + F + + GQ ++ K I+ + L+ + G+T+ + + Sbjct: 121 MTISDERKK--QVDFSDVYFNAGQSLLVKKGSPITGLESLTANTKVLAVKGSTSAKNIRE 178 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 + FE ++ A +A + +A T D S L ++ + ++++ + Sbjct: 179 KAPEA----TILEFENYQDAFNALKAGKGEALTTDNSILLGMQKQDPN---YILVGGNFT 231 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + P A+ +G E ++ T + + E Sbjct: 232 EEPYGIAVKKGQPELLQAINDTLKELKSNGEYD 264 >gi|146342965|ref|YP_001208013.1| glutamate/aspartate ABC transporter substrate binding protein [Bradyrhizobium sp. ORS278] gi|146195771|emb|CAL79798.1| glutamate/aspartate ABC transporter (substrate binding protein) [Bradyrhizobium sp. ORS278] Length = 304 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 96/260 (36%), Gaps = 9/260 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + L L IK+ G + G+ + F+ + N G Sbjct: 1 MKQLRLFGLAFAAALCAGQVQAEDLTGTLKTIKETGAITLGVRDSSIPFSYLDDNQKPVG 60 Query: 59 FDVDFCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 F +D C A+ + D +++ P+ + R L + ID+ +T R+ Sbjct: 61 FAIDICMGIVDAVKKELKLDKLEVKLNPVTSSTRIPLLANGTIDLECGSTTNNAERQK-- 118 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 ++F + ++ K I+ + L G + AGTT L + A + + I Sbjct: 119 QISFTNTHFLTASRYVSKKASNITKIDDLKGKPVVSTAGTTNIKQLTEANAARGLGINII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQG 233 + E R A+ D L +L ++ P+ +VI D SK P + + Sbjct: 179 PAKDHAEAFLMVETDRAVAFVMDDILLASLVASSKDPAAYVISSDAFSKPEPYGIMLRKD 238 Query: 234 DTEWYNIVSWTHYAMVTAEE 253 D ++ +V + T+ E Sbjct: 239 DPQFKKVVDAATAKIYTSGE 258 >gi|229015970|ref|ZP_04172931.1| hypothetical protein bcere0030_5530 [Bacillus cereus AH1273] gi|228745330|gb|EEL95371.1| hypothetical protein bcere0030_5530 [Bacillus cereus AH1273] Length = 276 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 103/269 (38%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDETKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNI----RQ 177 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 178 KSPESTVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M E Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYD 263 >gi|229022187|ref|ZP_04178737.1| hypothetical protein bcere0029_5500 [Bacillus cereus AH1272] gi|228739118|gb|EEL89564.1| hypothetical protein bcere0029_5500 [Bacillus cereus AH1272] Length = 273 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 103/269 (38%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 1 MKKLFTLIVFSCLFVLVVAGCGSKKDETKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 60 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 61 LKNPSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + + Sbjct: 121 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNI----RQ 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 175 KSPESTVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M E Sbjct: 232 GIAVQKGADDLTKEINSLLKDMKANGEYD 260 >gi|57168852|ref|ZP_00367982.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter coli RM2228] gi|57019688|gb|EAL56374.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter coli RM2228] Length = 279 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 111/279 (39%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +F + N+ L IK+ G ++ G+ F V G Sbjct: 1 MKKMLLSIFTTFVAVFLAACGGNSDSGASNSLERIKQDGVVRIGVFGDKPPFGYVDEKGV 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ + D +K+Q++ + A R L+S ++DI+ N T R Sbjct: 61 NQGYDIVLAKRIAKELLGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPERAE--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + + ISS+ L ++ + GTT + F + Sbjct: 119 VDFCLPYMKVALGVAVPQDSNISSIEDLKDKTLLLNKGTTADAY----FTKEYPDIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A + P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALIDQRGDALSHDNTLLFAW--VKEHPEFKMAIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + + E K ++ K DV+ Sbjct: 233 ELKEFIDNLITKL---GEEQFFHKVYDETLKSHFGDDVK 268 >gi|283853865|ref|ZP_06371081.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. FW1012B] gi|283570740|gb|EFC18784.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. FW1012B] Length = 272 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 62/256 (24%), Positives = 105/256 (41%), Gaps = 10/256 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M K ++S L +++ + + A L DIK RG L G+ F V GF Sbjct: 1 MRKTAWISALAGLLILGLAATALAGKLDDIKSRGALVAGVKDSQPPFGYVDEKTNQVVGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D AL+ + ++ P+ + R L IDI++ RE + F Sbjct: 61 EIDLMEALAKRLGVK---LELKPVTSSTRIPMLGQGAIDIVAATMTHKKERE--DQVDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ ++ K G++SV+ L G + G+T+E + K I FE Sbjct: 116 ITYFMTGQKLLVKKGGGVNSVADLGGKKVGSVKGSTSEQNV----KKAQPDCTVISFETY 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + + A T D S L +K ++D P I+ + IS P + + D+++ + Sbjct: 172 PEAFLALKQGKVQAMTTDESILVGIKNSDDNPDAWDIVGEYISPEPYGLGLPENDSDFRD 231 Query: 240 IVSWTHYAMVTAEELG 255 V+ M E Sbjct: 232 FVNLALMNMWETGEYQ 247 >gi|228983841|ref|ZP_04144036.1| hypothetical protein bthur0001_5580 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775890|gb|EEM24261.1| hypothetical protein bthur0001_5580 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 276 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L T + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVTGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSQIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M E Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYD 263 >gi|229154342|ref|ZP_04282462.1| hypothetical protein bcere0010_5420 [Bacillus cereus ATCC 4342] gi|228629166|gb|EEK85873.1| hypothetical protein bcere0010_5420 [Bacillus cereus ATCC 4342] Length = 273 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L T + + IKKRG L G+ F Sbjct: 1 MKKLFTLIVFSCLFVLVVTGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 60 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 61 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 121 EERKK--EVDFSDVYFKAGQSLLVKKGSQIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 178 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 179 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M E Sbjct: 232 GIAVQKGADDLTKEINSLLKDMKANGEYD 260 >gi|204930506|ref|ZP_03221436.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204320440|gb|EDZ05643.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 302 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 93/262 (35%), Gaps = 14/262 (5%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 4 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63 Query: 58 GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 64 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + G + K I L G ++ V +GTT+E+ L + M Sbjct: 124 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 241 Query: 234 DTEWYNIVSWTH---YAMVTAE 252 D E+ ++ T A AE Sbjct: 242 DPEFKKLMDDTIAQAQASGEAE 263 >gi|118476326|ref|YP_893477.1| ABC transporter periplasmic glutamine-binding protein [Bacillus thuringiensis str. Al Hakam] gi|118415551|gb|ABK83970.1| amino acid ABC transporter substrate-binding protein, PAAT family [Bacillus thuringiensis str. Al Hakam] Length = 276 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M E Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKANGEYD 263 >gi|15643359|ref|NP_228403.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Thermotoga maritima MSB8] gi|4981112|gb|AAD35678.1|AE001734_5 amino acid ABC transporter, periplasmic amino acid-binding protein [Thermotoga maritima MSB8] Length = 246 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 102/247 (41%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K VSIL + I+ F+ + +IK RG+L G++ F V NG+ GFD Sbjct: 1 MKKLLAVSILLVSIVIFSGA------IDEIKSRGYLLVGLSADFPPFEFVDENGNIVGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + + ++ + + +L +K+ID++ T R+ + F Sbjct: 55 VDLAKEIARRLGVE---LKIVDMTFDGLIPSLLTKKIDVIISGMTITEERKKVVA--FSD 109 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + GQ ++ K + L G ++ VQ GTT ++ ++ Y + F++ Sbjct: 110 PYFDAGQVIVVRKDSDFRPKTYEDLVGKTVAVQIGTTGDIEVSKY-----DGIKVVRFDK 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R DA D + + + VI ++S A+ + DT+ Sbjct: 165 FTDAFLELKRGRADAVVLD---SATARAFVAKNPDLVISSGVLSSEQYGIAVRKEDTDLL 221 Query: 239 NIVSWTH 245 ++ Sbjct: 222 EFINSVL 228 >gi|225862618|ref|YP_002747996.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB102] gi|225788614|gb|ACO28831.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB102] Length = 276 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 56/269 (20%), Positives = 102/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I ++ + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKNIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I ++ P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTEEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M + E Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKASGEYD 263 >gi|47568091|ref|ZP_00238796.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus G9241] gi|218232444|ref|YP_002365436.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus B4264] gi|229148978|ref|ZP_04277223.1| hypothetical protein bcere0011_5470 [Bacillus cereus m1550] gi|47555245|gb|EAL13591.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus G9241] gi|218160401|gb|ACK60393.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus B4264] gi|228634518|gb|EEK91102.1| hypothetical protein bcere0011_5470 [Bacillus cereus m1550] Length = 276 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M E Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYD 263 >gi|229114241|ref|ZP_04243662.1| hypothetical protein bcere0017_5430 [Bacillus cereus Rock1-3] gi|228669261|gb|EEL24682.1| hypothetical protein bcere0017_5430 [Bacillus cereus Rock1-3] Length = 275 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 99/269 (36%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAIEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I + + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKGIDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTGLKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M + E Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKASGEYD 263 >gi|168236652|ref|ZP_02661710.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194737342|ref|YP_002113776.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194712844|gb|ACF92065.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290231|gb|EDY29587.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 302 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 93/262 (35%), Gaps = 11/262 (4%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 4 RKLTTTMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63 Query: 58 GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 64 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + G + K I L G ++ V +GTT+E+ L + M Sbjct: 124 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 241 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 D E+ ++ T T+ E Sbjct: 242 DPEFKKLMDDTIAQAQTSGEAE 263 >gi|229028439|ref|ZP_04184561.1| hypothetical protein bcere0028_5570 [Bacillus cereus AH1271] gi|228732888|gb|EEL83748.1| hypothetical protein bcere0028_5570 [Bacillus cereus AH1271] Length = 275 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M E Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYD 263 >gi|229137440|ref|ZP_04266051.1| hypothetical protein bcere0013_5720 [Bacillus cereus BDRD-ST26] gi|228645998|gb|EEL02221.1| hypothetical protein bcere0013_5720 [Bacillus cereus BDRD-ST26] Length = 273 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 1 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 60 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 61 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 121 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 178 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 179 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M E Sbjct: 232 GIAVQKGADDLTKEINSLLKDMKANGEYD 260 >gi|229171423|ref|ZP_04299008.1| hypothetical protein bcere0006_5510 [Bacillus cereus MM3] gi|228612127|gb|EEK69364.1| hypothetical protein bcere0006_5510 [Bacillus cereus MM3] Length = 276 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEVKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M E Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYD 263 >gi|217958226|ref|YP_002336772.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH187] gi|217064327|gb|ACJ78577.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH187] Length = 276 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M E Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYD 263 >gi|229042502|ref|ZP_04190247.1| hypothetical protein bcere0027_5680 [Bacillus cereus AH676] gi|296501400|ref|YP_003663100.1| glutamine-binding protein [Bacillus thuringiensis BMB171] gi|228726855|gb|EEL78067.1| hypothetical protein bcere0027_5680 [Bacillus cereus AH676] gi|296322452|gb|ADH05380.1| glutamine-binding protein [Bacillus thuringiensis BMB171] Length = 276 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSEIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M E Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYD 263 >gi|207856130|ref|YP_002242781.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206707933|emb|CAR32222.1| ABC transporter periplasmic binding protein (glutamate/aspartate?) [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 308 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 93/262 (35%), Gaps = 11/262 (4%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 10 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDRIAKNGVIVVGHRESSVPFSYYDNQQKVV 69 Query: 58 GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 70 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 129 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + G + K I L G ++ V +GTT+E+ L + M Sbjct: 130 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 187 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 188 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 247 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 D E+ ++ T T+ E Sbjct: 248 DPEFKKLMDDTIAQAQTSGEAE 269 >gi|120610617|ref|YP_970295.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120589081|gb|ABM32521.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 295 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 98/259 (37%), Gaps = 7/259 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L + + + A L I G + V F+ + G GF Sbjct: 1 MKTTLCSAALLACGMLAGA-AAQADTLKKIADSGKITLAYRESSVPFSYLAGAGAPIGFS 59 Query: 61 VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD A+ A+ K++ + ++ R + + +D+ +T R + Sbjct: 60 VDISNAVVDAVKKKLNKPDLKVELQAVTSQNRIPLVTNGTVDLECGSTTNNTARAKDVQ- 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F ++ G ++ K G+ + + L+ ++ GTT + Y + +N++ I+ Sbjct: 119 -FAVNYFYTGTRLLVKKSSGVKNYADLAKKTVASTTGTTNAQVIRKYNRDNNLEMDIILG 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R A+ D L+ LK P+E ++ D + P A + + D + Sbjct: 178 KDHNDSMLLVDTGRALAFAMDDILLFGLKANAVNPAEWDVVGDALQVEPYACMLRKDDPQ 237 Query: 237 WYNIVSWTHYAMVTAEELG 255 + +V+ M+ + E Sbjct: 238 FQALVNGVIGGMMKSGEFE 256 >gi|242278992|ref|YP_002991121.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] gi|242121886|gb|ACS79582.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] Length = 271 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 101/244 (41%), Gaps = 10/244 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDV 61 + + + ++ + + A L ++K RG L CG+ +V F + + G D+ Sbjct: 2 RRLSIIVAMVLAMALCASVAMADKLQEVKARGVLMCGVKDAVVPFGYIDEDTKKLVGLDI 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D C ++ + + P+ + R + ID+ + + R+ + F Sbjct: 62 DICNYIAKELGVKAE---FKPVTSATRIPMVVQGSIDLAAATMTHKIARD--DTIDFSIT 116 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + DGQ ++ K GI+SV+ L G + G+T+E + A + FE + Sbjct: 117 YFMDGQKLLVKKGAGINSVADLKGKKVGTAKGSTSEQNI----MAAQPDCKVLSFEGYPQ 172 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + + A T D + L LK ++ P + I+ + IS P + + ++ + + V Sbjct: 173 AMLALKQGKVKAVTTDSTILLGLKNSDPNPEKWEIVGEFISPEPYGIGLPENESNFRDAV 232 Query: 242 SWTH 245 + Sbjct: 233 NQAL 236 >gi|228913329|ref|ZP_04076962.1| hypothetical protein bthur0012_5720 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228925828|ref|ZP_04088912.1| hypothetical protein bthur0010_5540 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228833843|gb|EEM79396.1| hypothetical protein bthur0010_5540 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228846238|gb|EEM91257.1| hypothetical protein bthur0012_5720 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 276 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAIEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M E Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKANGEYD 263 >gi|229120290|ref|ZP_04249540.1| hypothetical protein bcere0016_6050 [Bacillus cereus 95/8201] gi|228663100|gb|EEL18690.1| hypothetical protein bcere0016_6050 [Bacillus cereus 95/8201] Length = 276 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKEMNTKQGGAIEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M E Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKANGEYD 263 >gi|150018984|ref|YP_001311238.1| extracellular solute-binding protein [Clostridium beijerinckii NCIMB 8052] gi|149905449|gb|ABR36282.1| extracellular solute-binding protein, family 3 [Clostridium beijerinckii NCIMB 8052] Length = 270 Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats. Identities = 60/268 (22%), Positives = 104/268 (38%), Gaps = 20/268 (7%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVGFA 48 M + F+++ + + S++ + IK RG LK G+ + + Sbjct: 1 MKLRKLFLAVGLGVCMMMAGCSSSTPTNTGGNTAEAKEIQAIKDRGVLKVGVKVDVPKYG 60 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 G+ +G ++D +A++ I D SK+++ + AK R L + +ID+++ T Sbjct: 61 YKNPQTGEMEGLEIDLSKAIAKKILGDESKVEFQGVTAKTRGPLLDNGEIDMVAATFTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ F DG G ++ K G SS+ L G +I V TT+ L + Sbjct: 121 DERKK--SYNFSDPYIKDGVGLLVKKSLGASSLKDLDGKTIGVAQSATTKTALQKEAEKE 178 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + E+ AA + R D + D S L VIL D Sbjct: 179 GITLKFSELGGYPELKAALDSGRIDCFAVDASILNGYV-----DDSTVILNDRYDPQEYG 233 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A + +TE V+ M ++ EL Sbjct: 234 IATKKDNTELAKEVNEVINDMKSSGELD 261 >gi|172061134|ref|YP_001808786.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171993651|gb|ACB64570.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 306 Score = 162 bits (409), Expect = 8e-38, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 94/257 (36%), Gaps = 6/257 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + V+ L + + L I++ G + G V F+ V A+G GF D Sbjct: 13 RSLLVAACALACGTALAAQPLSGTLEKIRQAGLISIGHRETSVPFSYVDASGKVIGFSQD 72 Query: 63 FCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + + + +++++P+ ++ R +Q+ +D+ T R + F Sbjct: 73 LCDRVIATVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--F 130 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + GI L+G ++ GTT+E L + M I + Sbjct: 131 STTFFVATTRLLTRTSSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKD 190 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R AY D L ++ +P++ I+ S + + D ++ Sbjct: 191 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWAIVGTPQSSEAYGFMLRKDDPQFK 250 Query: 239 NIVSWTHYAMVTAEELG 255 +V ++ + E+ Sbjct: 251 ALVDGVLVQLMKSGEIN 267 >gi|161504171|ref|YP_001571283.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865518|gb|ABX22141.1| hypothetical protein SARI_02277 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 308 Score = 162 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 93/262 (35%), Gaps = 11/262 (4%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 10 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 69 Query: 58 GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +++ LP+ ++ R LQ+ D +T L R+ Sbjct: 70 GYSQDYSNAIVEAVKKKLNKPDLQVKLLPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 129 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + G + K I L G ++ V +GTT+E+ L + M Sbjct: 130 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 187 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 188 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 247 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 D E+ ++ T T+ E Sbjct: 248 DPEFKKLMDDTIAQAQTSGEAE 269 >gi|229083877|ref|ZP_04216186.1| hypothetical protein bcere0022_5340 [Bacillus cereus Rock3-44] gi|228699455|gb|EEL52131.1| hypothetical protein bcere0022_5340 [Bacillus cereus Rock3-44] Length = 276 Score = 162 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFS-----------TNASILGDIKKRGFLKCGINTGLVGFA 48 M K F F+ CL L ++ IKKRG L G+ F Sbjct: 4 MKKLFTFIVFACLFTLVVAGCGNKKEEAKETNTKQGGVVEQIKKRGKLVVGVKHDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D SK++ + +K R L++ ID + T Sbjct: 64 LKNPSTGKVEGFDVDIAKALAKKILGDESKLELKEVTSKTRIPMLKNGDIDTIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSIDDVKKDVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDAN---YQVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G T+ ++ M E Sbjct: 235 GIAVQKGATDLTKEINDLLKEMKANGEYD 263 >gi|228932067|ref|ZP_04094959.1| hypothetical protein bthur0009_5520 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|301052294|ref|YP_003790505.1| ABC transporter substrate-binding protein [Bacillus anthracis CI] gi|228827650|gb|EEM73392.1| hypothetical protein bthur0009_5520 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|300374463|gb|ADK03367.1| ABC transporter, substrate-binding protein; probable glutamine-binding protein [Bacillus cereus biovar anthracis str. CI] Length = 276 Score = 162 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKEEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M E Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKANGEYD 263 >gi|229089702|ref|ZP_04220963.1| hypothetical protein bcere0021_5460 [Bacillus cereus Rock3-42] gi|228693601|gb|EEL47303.1| hypothetical protein bcere0021_5460 [Bacillus cereus Rock3-42] Length = 273 Score = 162 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 1 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 60 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 61 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 121 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 178 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 179 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M E Sbjct: 232 GIAVQKGADDLTKEINSLIKDMKANGEYD 260 >gi|30260794|ref|NP_843171.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Ames] gi|47525919|ref|YP_017268.1| amino acid ABC transporter amino acid-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49183632|ref|YP_026884.1| amino acid ABC transporter amino acid-binding protein [Bacillus anthracis str. Sterne] gi|49476850|ref|YP_034898.1| glutamine ABC transporter substrate-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65318066|ref|ZP_00391025.1| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Bacillus anthracis str. A2012] gi|165872945|ref|ZP_02217568.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0488] gi|167635159|ref|ZP_02393475.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0442] gi|167640878|ref|ZP_02399136.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0193] gi|170689027|ref|ZP_02880227.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0465] gi|170708475|ref|ZP_02898917.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0389] gi|177652832|ref|ZP_02935205.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0174] gi|190568524|ref|ZP_03021430.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis Tsiankovskii-I] gi|196035755|ref|ZP_03103158.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus W] gi|196041840|ref|ZP_03109129.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus NVH0597-99] gi|196047174|ref|ZP_03114391.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB108] gi|218901836|ref|YP_002449670.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH820] gi|227816490|ref|YP_002816499.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. CDC 684] gi|228944392|ref|ZP_04106765.1| hypothetical protein bthur0007_5660 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229182974|ref|ZP_04310206.1| hypothetical protein bcere0004_5530 [Bacillus cereus BGSC 6E1] gi|229602354|ref|YP_002865238.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0248] gi|254684283|ref|ZP_05148143.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. CNEVA-9066] gi|254722087|ref|ZP_05183876.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A1055] gi|254738747|ref|ZP_05196450.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Western North America USA6153] gi|254742041|ref|ZP_05199728.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Kruger B] gi|254754973|ref|ZP_05207007.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Vollum] gi|254762296|ref|ZP_05214140.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Australia 94] gi|30254243|gb|AAP24657.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Ames] gi|47501067|gb|AAT29743.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49177559|gb|AAT52935.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Sterne] gi|49328406|gb|AAT59052.1| ABC transporter, substrate-binding protein; probable glutamine-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|164711299|gb|EDR16853.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0488] gi|167511098|gb|EDR86486.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0193] gi|167529418|gb|EDR92169.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0442] gi|170126596|gb|EDS95481.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0389] gi|170667012|gb|EDT17775.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0465] gi|172081866|gb|EDT66935.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0174] gi|190560318|gb|EDV14297.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis Tsiankovskii-I] gi|195991722|gb|EDX55687.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus W] gi|196022044|gb|EDX60734.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB108] gi|196027334|gb|EDX65952.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus NVH0597-99] gi|218539731|gb|ACK92129.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH820] gi|227003893|gb|ACP13636.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. CDC 684] gi|228600431|gb|EEK58019.1| hypothetical protein bcere0004_5530 [Bacillus cereus BGSC 6E1] gi|228815294|gb|EEM61542.1| hypothetical protein bthur0007_5660 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229266762|gb|ACQ48399.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0248] Length = 276 Score = 162 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M E Sbjct: 235 GIAVQKGADDLTKEINSLIKDMKANGEYD 263 >gi|305431997|ref|ZP_07401164.1| ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter coli JV20] gi|304445081|gb|EFM37727.1| ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter coli JV20] Length = 279 Score = 162 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 110/279 (39%), Gaps = 16/279 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +F + N+ L IK+ G ++ G+ F V G Sbjct: 1 MKKMLLSIFTTFVAVFLAACGGNSDSGASNSLERIKQDGVVRIGVFGDKPPFGYVDEKGV 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+D+ + ++ + D +K+Q++ + A R L+S ++DI+ N T R Sbjct: 61 NQGYDIVLAKRIAKELLGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPERAE--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + + ISS+ L ++ + GTT + F + Sbjct: 119 VDFCLPYMKVALGVAVPQDSNISSIEDLKDKTLLLNKGTTADAY----FTKEYPDIKTLK 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ E AA R DA + D + L+A + P + + ++ +K +APA+ +GD Sbjct: 175 YDQNTETFAALIDQRGDALSHDNTLLFAW--VKEHPEFKMAIKELGNKDVIAPAVKKGDK 232 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E + + E K + K DV+ Sbjct: 233 ELKEFIDNLITKL---GEEQFFHKAYGETLKSHFGDDVK 268 >gi|256750908|ref|ZP_05491792.1| extracellular solute-binding protein family 3 [Thermoanaerobacter ethanolicus CCSD1] gi|256750243|gb|EEU63263.1| extracellular solute-binding protein family 3 [Thermoanaerobacter ethanolicus CCSD1] Length = 260 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 99/262 (37%), Gaps = 17/262 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGD- 55 M K + +L + I+ S A+ L IK++G + G + F K G+ Sbjct: 1 MNKKPLLLLLTMTIVLSLFLSACGNEPANTLDKIKQKGVIVMGTSADFPPFEFHKVEGNK 60 Query: 56 --WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 GFD+D A++ + ++ ++ K ALQ+ +ID++ T + + Sbjct: 61 DTIVGFDIDIANAIAKKLGVK---LEIKDMDFKGLIPALQAGRIDMIVAGMTPTP--DRA 115 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F I Y Q ++ I L G ++ VQ GTT+E + Sbjct: 116 ENVDFSDIYYNSQQVVVVKNDSPILKFDDLKGKTVAVQIGTTSEEAAKKI-----PDVNL 170 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 RV + + RCDA + + A + + +A A+ +G Sbjct: 171 KQLNRVGDAFMDLKNGRCDAIVLEDTVANAYLKEYKDMKILSMKEINTEEGGMAVAVAKG 230 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 + E NI++ + T+ E Sbjct: 231 NKELVNIINEVIKELKTSGEYD 252 >gi|85058784|ref|YP_454486.1| glutamate and aspartate transporter subunit [Sodalis glossinidius str. 'morsitans'] gi|84779304|dbj|BAE74081.1| glutamate-aspartate ABC transporter periplasmic component GltI [Sodalis glossinidius str. 'morsitans'] Length = 298 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 98/263 (37%), Gaps = 14/263 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K L L+++ + +A L IK G + G + F+ Sbjct: 3 MRK----LALSLVMIGIAASQAHAEELTGTLKKIKDNGVIVVGHRESSIPFSYYDNQQKV 58 Query: 57 KGFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ D+ A+ A+ +++YLP+ + R LQ+ D +T L R+ Sbjct: 59 VGYSQDYSNAIVDAVKKKIDAPNLQVKYLPITSSNRIPLLQNGTYDFECGSTTNNLERQK 118 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F + G + K I S L+G ++ V AGTT+E+ L MK Sbjct: 119 --QVDFSDTLFIIGTRLAVKKGALIKDFSDLAGKTVVVTAGTTSEVLLNKLNDEKQMKMR 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + + R A+ D + L + +P + I+ SK + + Sbjct: 177 IISTKDHGDSFRTLENGRAVAFMMDDALLAGEHAKSRKPDQWDIVGTPQSKEAYGCMLRK 236 Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255 D ++ ++ T + T+ E Sbjct: 237 DDAQFKTLMDDTIAHIQTSGEAE 259 >gi|16759617|ref|NP_455234.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142610|ref|NP_805952.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|25296373|pir||AF0583 ABC transporter periplasmic binding protein (glutamate/ aspartate) STY0710 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501909|emb|CAD05136.1| ABC transporter periplasmic binding protein (glutamate/aspartate?) [Salmonella enterica subsp. enterica serovar Typhi] gi|29138241|gb|AAO69812.1| ABC transporter periplasmic binding protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 308 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 92/262 (35%), Gaps = 11/262 (4%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 10 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 69 Query: 58 GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ + +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 70 GYSQDYSNAIVEVVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 129 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + G + K I L G ++ V +GTT+E+ L + M Sbjct: 130 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 187 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 188 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 247 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 D E+ ++ T T+ E Sbjct: 248 DPEFKKLMDDTIAQAQTSGEAE 269 >gi|213052442|ref|ZP_03345320.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425078|ref|ZP_03357828.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 302 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 92/262 (35%), Gaps = 11/262 (4%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 4 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63 Query: 58 GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ + +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 64 GYSQDYSNAIVEVVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + G + K I L G ++ V +GTT+E+ L + M Sbjct: 124 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 241 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 D E+ ++ T T+ E Sbjct: 242 DPEFKKLMDDTIAQAQTSGEAE 263 >gi|157369457|ref|YP_001477446.1| glutamate and aspartate transporter subunit [Serratia proteamaculans 568] gi|157321221|gb|ABV40318.1| extracellular solute-binding protein family 3 [Serratia proteamaculans 568] Length = 298 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 89/257 (34%), Gaps = 6/257 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L L IK G + G V F+ G+ Sbjct: 3 MRKLALSLLLIGTAANVAHAEELTGTLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYS 62 Query: 61 VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 D+ + A+ +++ LP+ ++ R LQ+ D +T L R+ Sbjct: 63 QDYSNQIVEAVKKKLNAPDLQVKMLPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAA- 121 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G ++ K + L+G + V +GTT+E+ L + M I Sbjct: 122 -FSDTIFVVGTRLLVKKGSDVKDFKDLAGKPVVVTSGTTSEVLLNKLNDSGKMNMRIISA 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D + L + +P + I+ SK + + D E Sbjct: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDQWEIIATPQSKEAYGCMLRKDDPE 240 Query: 237 WYNIVSWTHYAMVTAEE 253 + +V T T+ E Sbjct: 241 FKKLVDDTIAQAQTSGE 257 >gi|83718416|ref|YP_441772.1| glutamate/aspartate ABC transporter periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis E264] gi|83652241|gb|ABC36304.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis E264] Length = 298 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 93/259 (35%), Gaps = 8/259 (3%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + + L + + L IK G + G + F+ N G Sbjct: 1 MMKFPKAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVG 60 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + DF + A+ +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 61 YSRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQA 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + G + K GI + L G ++ AGTT+E L + + M I Sbjct: 121 A--FSDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D + L + +P E VI+ S+ + + D Sbjct: 179 SAKDHGESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDD 238 Query: 235 TEWYNIVSWTHYAMVTAEE 253 + +V + + E Sbjct: 239 PAFKKVVDDAIAQVEKSGE 257 >gi|296103387|ref|YP_003613533.1| glutamate/aspartate transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057846|gb|ADF62584.1| glutamate/aspartate transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 316 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 93/261 (35%), Gaps = 10/261 (3%) Query: 3 KDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 + ++L + + + S L I K G + G V F+ G Sbjct: 19 RKLATAMLVMGMSAGVVHAEDAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNTQKVVG 78 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D+ A+ A+ +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 79 YSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA 138 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + G + K I + L G ++ V +GTT+E+ L M I Sbjct: 139 A--FSDTIFVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLHKLNDEKKMDMRII 196 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D + L + +P I+ SK + + D Sbjct: 197 SAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWDIVGTAQSKEAYGCMLRKDD 256 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 ++ ++ T + T+ E Sbjct: 257 PQFKKLIDDTIAQVQTSGEAE 277 >gi|261245937|emb|CBG23739.1| ABC transporter periplasmic binding protein (glutamate/aspartate?) [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992399|gb|ACY87284.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157265|emb|CBW16753.1| ABC transporter periplasmic binding protein (glutamate/aspartate?) [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|323128982|gb|ADX16412.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 308 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 92/262 (35%), Gaps = 11/262 (4%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 10 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 69 Query: 58 GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 70 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 129 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + G + K I L G ++ V +GTT+E+ L + M Sbjct: 130 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 187 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 188 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 247 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 E+ ++ T T+ E Sbjct: 248 APEFKKLMDDTIAQAQTSGEAE 269 >gi|167990674|ref|ZP_02571774.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205331024|gb|EDZ17788.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] Length = 302 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 92/262 (35%), Gaps = 11/262 (4%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 4 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63 Query: 58 GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 64 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + G + K I L G ++ V +GTT+E+ L + M Sbjct: 124 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 241 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 E+ ++ T T+ E Sbjct: 242 APEFKKLMDDTIAQAQTSGEAE 263 >gi|46580747|ref|YP_011555.1| amino acid ABC transporter periplasmic amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120601965|ref|YP_966365.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4] gi|46450167|gb|AAS96815.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120562194|gb|ABM27938.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio vulgaris DP4] gi|311234461|gb|ADP87315.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris RCH1] Length = 270 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 10/229 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS 76 T+ +A L +IK+RG L CG+ +V F + + GFDVD C+ ++ Sbjct: 16 TAAVAHAGKLDEIKQRGTLVCGVKDSVVPFGFIDETSKQLVGFDVDICQFIADRAGVK-- 73 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 ++ + + R L +D+++ R+ + F + GQ ++ K G Sbjct: 74 -LEVKTVTSATRIPMLTQGSVDLVAATMTHKFERD--DVIDFSITYFDAGQRLLVKKGGG 130 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I S + L G + G+T+E KA + F+ + A + + +A T Sbjct: 131 IKSAADLKGKKVATVKGSTSEKN----MKAAQPDCVVVSFDEYPQAFLALKQGKAEAVTT 186 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D L LK ++ P + I+ D I+ P +++ D+++ + V+ + Sbjct: 187 DEPILVGLKNSDPEPDKWDIVGDFIASEPYGLGLVENDSKFRDFVNKSL 235 >gi|167039129|ref|YP_001662114.1| extracellular solute-binding protein [Thermoanaerobacter sp. X514] gi|300913281|ref|ZP_07130598.1| extracellular solute-binding protein family 3 [Thermoanaerobacter sp. X561] gi|307723705|ref|YP_003903456.1| family 3 extracellular solute-binding protein [Thermoanaerobacter sp. X513] gi|166853369|gb|ABY91778.1| extracellular solute-binding protein, family 3 [Thermoanaerobacter sp. X514] gi|300889966|gb|EFK85111.1| extracellular solute-binding protein family 3 [Thermoanaerobacter sp. X561] gi|307580766|gb|ADN54165.1| extracellular solute-binding protein family 3 [Thermoanaerobacter sp. X513] Length = 260 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 99/262 (37%), Gaps = 17/262 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGD- 55 M K + +L + I+ S A+ L IK++G + G + F K G+ Sbjct: 1 MNKKPLLLLLTMTIVLSLFLSACGNEPANTLDKIKQKGVIVMGTSADFPPFEFHKVEGNK 60 Query: 56 --WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 GFD+D A++ + ++ ++ K ALQ+ +ID++ T + + Sbjct: 61 DTIVGFDIDIANAIAKKLGVK---LEIKDMDFKGLIPALQAGRIDMIVAGMTPTP--DRA 115 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + Y Q ++ I L G ++ VQ GTT+E + Sbjct: 116 ENVDFSDLYYNSQQVVVVKNDSPILKFDDLKGKTVAVQIGTTSEEAAKKI-----PDVNL 170 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 RV + + RCDA + + A + + +A A+ +G Sbjct: 171 KQLNRVGDAFMDLKNGRCDAIVLEDTVANAYLKEYKDMKILSMKEINTEEGGMAVAVAKG 230 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 + E NI++ + T+ E Sbjct: 231 NKELVNIINEVIKELKTSGEYD 252 >gi|226942880|ref|YP_002797953.1| amino acid ABC transporter perplasmic binding protein [Azotobacter vinelandii DJ] gi|226717807|gb|ACO76978.1| amino acid ABC transporter, perplasmic binding protein [Azotobacter vinelandii DJ] Length = 302 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 92/258 (35%), Gaps = 9/258 (3%) Query: 5 FFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61 S L + + T+F+ L IK G + G + F+ + A+ G+ Sbjct: 7 LLGSALAVALSSGTAFAAEELTGTLKKIKDTGTITLGHRDASIPFSYLGGASRQPIGYSH 66 Query: 62 DF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D AL + K++Y + ++ R +Q+ +D+ +T R +A Sbjct: 67 DLQLKVVEALKQQLGLPELKVRYTLVTSQTRIPLVQNGTVDLECGSTTNNQER--QQQVA 124 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + G + K GI+ L G ++ AGTT+E L M + I + Sbjct: 125 FSVGIFEVGTRLLTRKTSGIADFPDLKGKNVVTTAGTTSERLLKAMNVERQMGMNIIAAK 184 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R A+ D + LY +P + ++ S + + D + Sbjct: 185 DHGEAFLMLESGRAVAFMMDDALLYGEMAKARKPDDWTVVGTPQSYEIYGCMLRKDDPAF 244 Query: 238 YNIVSWTHYAMVTAEELG 255 V A + E+ Sbjct: 245 KKAVDGALTATFESGEIN 262 >gi|71064880|ref|YP_263607.1| ABC glutamate/aspartate transporter, periplasmic binding protein GltI [Psychrobacter arcticus 273-4] gi|71037865|gb|AAZ18173.1| ABC glutamate/aspartate transporter, periplasmic binding protein GltI [Psychrobacter arcticus 273-4] Length = 319 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 49/264 (18%), Positives = 94/264 (35%), Gaps = 17/264 (6%) Query: 7 VSILCLIILFFTSFSTNA----------SILGDIKKRGFLKCGINTGLVGFAEV-KANGD 55 ++++ + L + N+ L IK+ G + G + F+ + Sbjct: 13 LTLVAFMALALAGCNNNSQTSTETTNTNGTLDKIKESGTIVVGHRDSSIPFSYIADDPNQ 72 Query: 56 WKGFDVDF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G+ D A+ + KI+Y + ++ R +Q+ +D +T R+ Sbjct: 73 PIGYAHDLEMKVVEAVKQKLNMPDLKIRYNLITSQTRIPLVQNGTVDFECGSTTNNEERQ 132 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + F + G + K GI L G ++ AGTT+E + +Y M Sbjct: 133 KQVA--FSNGFFEIGTRLLTKKDSGIQGFDDLKGKTLVTTAGTTSERYIREYNDDKKMNI 190 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + I + E R +A+ D L K P E VI+ + S + Sbjct: 191 NIISAKDHGEGFLMLENGRAEAFMMDDVLLAGEKAKAKNPDEWVIVGEPQSFEIYGCMMR 250 Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255 + D E+ +V + + E+ Sbjct: 251 KDDPEFKAVVDDALATVFKSGEIN 274 >gi|322833889|ref|YP_004213916.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] gi|321169090|gb|ADW74789.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] Length = 298 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 92/257 (35%), Gaps = 8/257 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K +L + + + + L IK G + G V F+ G+ Sbjct: 4 RKLALSVLLASVTVSSFAHAEELTGTLKKIKDNGVIVVGHRESSVPFSYYNNEQKVVGYS 63 Query: 61 VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 D+ A+ A+ +++ +P+ ++ R LQ+ D +T L R Sbjct: 64 QDYSDAIVDAVKKKLNLPDLQVKMMPITSQNRIPLLQNGTYDFECGSTTNNLER--QQQA 121 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 AF + G ++ K I + L G ++ V +GTT+E+ L + + I Sbjct: 122 AFSDTIFVIGTRLLVKKGSEIKDFTDLKGKTVVVTSGTTSEVLLNKLNEEKKLDLRIISA 181 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R A+ D + L + +P I+ SK + + D E Sbjct: 182 KDHGDSFRTLETGRAVAFMMDDALLAGERAKAKKPDNWEIVGTPQSKEAYGCMMRKDDAE 241 Query: 237 WYNIVSWTH-YAMVTAE 252 + +V T A + E Sbjct: 242 FKKLVDDTIVQAQTSGE 258 >gi|238755070|ref|ZP_04616418.1| Glutamate/aspartate periplasmic-binding protein [Yersinia ruckeri ATCC 29473] gi|238706774|gb|EEP99143.1| Glutamate/aspartate periplasmic-binding protein [Yersinia ruckeri ATCC 29473] Length = 298 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 88/249 (35%), Gaps = 6/249 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L + L IK G + G V F+ G+ Sbjct: 3 MRKLALSLLLVGMASSVAHAEELTGTLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYS 62 Query: 61 VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 D+ + A+ +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 63 QDYSNLIVDAVKKKLNLPDLQVKLIPVTSQNRIPLLQNGTFDFECGSTTNNLERQKQAA- 121 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G + K GI L+G ++ V +GTT+E+ L + + M I Sbjct: 122 -FSNTIFVVGTRLLTKKDSGIKDFKDLAGKAVVVTSGTTSEVLLNKLNEENKMDMRIISA 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D + L + + E I+ S+ + + D + Sbjct: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKAGEWEIVGTPQSQEAYGCMLRKDDPQ 240 Query: 237 WYNIVSWTH 245 + ++ T Sbjct: 241 FKALMDQTI 249 >gi|33598570|ref|NP_886213.1| amino-acid ABC transporter binding protein precursor [Bordetella parapertussis 12822] gi|33603520|ref|NP_891080.1| amino-acid ABC transporter binding protein precursor [Bordetella bronchiseptica RB50] gi|33574699|emb|CAE39356.1| amino-acid ABC transporter binding protein precursor [Bordetella parapertussis] gi|33577644|emb|CAE34909.1| amino-acid ABC transporter binding protein precursor [Bordetella bronchiseptica RB50] Length = 299 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 92/251 (36%), Gaps = 6/251 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K V L+ + ++ + L IK G + G + F+ + G+ ++ Sbjct: 2 KISTVFFAALVGVAASAPAHAEGRLDKIKSSGTITIGHRDASIPFSYLDDKQKPIGYSME 61 Query: 63 FCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C A+ + + K+ +P+ + R + + +D++ + T+ R +AF Sbjct: 62 ICEKAVEAIKAKLGMAQIKVNLVPVTSSTRIPLVANGTVDLVCGSATNTVER--QQQVAF 119 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 P T+ F K + + + G ++ AGT+ L + + I + Sbjct: 120 APTTFVTATRFAAKKSSNLKKLDDMKGKTVVSTAGTSNIRWLTQANEKDGLDMRIIPTKD 179 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R A+ D L L T +P E +I D + P A + + D + Sbjct: 180 HPAAMLTVANGRAAAFFMDDVLLAGLVATERKPDEWMISEDTYTVEPYALILPKDDPAFK 239 Query: 239 NIVSWTHYAMV 249 +V T M+ Sbjct: 240 KVVDDTVTGMM 250 >gi|163938563|ref|YP_001643447.1| extracellular solute-binding protein [Bacillus weihenstephanensis KBAB4] gi|229131583|ref|ZP_04260466.1| hypothetical protein bcere0014_5420 [Bacillus cereus BDRD-ST196] gi|163860760|gb|ABY41819.1| extracellular solute-binding protein family 3 [Bacillus weihenstephanensis KBAB4] gi|228651874|gb|EEL07828.1| hypothetical protein bcere0014_5420 [Bacillus cereus BDRD-ST196] Length = 276 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 103/269 (38%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQDGAVEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDIAKALAKKILGDEKKLELKEVTSKTRIPLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I S+ + G + G+T+ + + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTNNI----RQ 177 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + + FE E A +A + D T D + LY + + + ++ I + P Sbjct: 178 KSPESTVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M E Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKANGEYD 263 >gi|110347169|ref|YP_665987.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1] gi|110283280|gb|ABG61340.1| amino acid ABC transporter substrate-binding protein, PAAT family [Chelativorans sp. BNC1] Length = 303 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 98/260 (37%), Gaps = 8/260 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + + + + + L IK G + G V F+ + G+ Sbjct: 1 MLKKLCAFAVVMTAMCGGASADDLTGTLKKIKDTGVITVGNRDSSVPFSYLDDKQQPVGY 60 Query: 60 DVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 VD C A+ + D ++++ P+ + R + + +D+ +T T R+ + Sbjct: 61 AVDICLKVVDAVKERLKLDKLEVRFNPVTSATRIPLIANGTVDLECGSTFNTAERQKQVA 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + F+ K ++S++ L G S+ +GT L + A + + I Sbjct: 121 --FSNTYFLTANRFVAKKSSNLNSIADLKGQSVVSTSGTVNIQELNEVNTAQQLGMNIIA 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGD 234 E R A+ D L +L + PS + I D + P A + + D Sbjct: 179 ANDHAEAFLMVETGRAAAFVMDDILLASLVAGSRDPSGYAISQDAFSNPQPYAIMLRRDD 238 Query: 235 TEWYNIVSWTHYAMVTAEEL 254 E+ +V A+ + E+ Sbjct: 239 AEFKELVDDATAALYKSPEM 258 >gi|328956549|ref|YP_004373935.1| major cell-binding factor [Carnobacterium sp. 17-4] gi|328672873|gb|AEB28919.1| major cell-binding factor [Carnobacterium sp. 17-4] Length = 274 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 107/264 (40%), Gaps = 23/264 (8%) Query: 1 MYKD-FFVSILCLIILFFTSFSTNAS--------------ILGDIKKRGFLKCGINTGLV 45 M K +++ +LF + S++ S + IK+ G LK G+ + Sbjct: 1 MKKRNLLATVILSSVLFLGACSSDDSSTTEADTPKGSDQLTIESIKEAGVLKVGVKEDVP 60 Query: 46 GFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F + G+ +GF++D + ++ I DP I+ P+ AK R L + ++D++ Sbjct: 61 NFGLKNTDTGEIEGFEIDIAKKIAEDILGDPDAIELTPVTAKTRGPLLDNGEVDMVIATF 120 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F Y D G ++ K K + + GA++ V +TT +A Sbjct: 121 TVTEERKET--YNFSDAYYEDAVGLLVKKDKNYEGLKDMDGANVGVAQSSTTSEAIASEA 178 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + +++ + EI AA + R DA++ D S L ILPD + Sbjct: 179 EQYDIAVEFSEYATYPEIKAALDSGRVDAFSVDRSILAGYL-----DDSTEILPDRFATQ 233 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAM 248 A + +TE V+ Sbjct: 234 DYGIATKKTNTELAEHVNGLITTW 257 >gi|297544040|ref|YP_003676342.1| extracellular solute-binding protein family 3 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841815|gb|ADH60331.1| extracellular solute-binding protein family 3 [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 260 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 98/262 (37%), Gaps = 17/262 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGD- 55 M K F ++L + ++ + S L IK++G + G + F K G+ Sbjct: 1 MNKKSFTALLIITLVLSLFLAGCGSKPTNTLEKIKQKGVIVMGTSADFPPFEFHKVEGNK 60 Query: 56 --WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 GFD+D A++ + ++ ++ K ALQS +ID++ T + + Sbjct: 61 DTIVGFDIDIANAIAKKLGVK---LEIKDMDFKGLIPALQSGRIDMIVAGMTPTP--DRA 115 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + Y Q ++ I L G ++ VQ GTT+E + Sbjct: 116 ENVDFSDLYYNSQQVVVVKNDSPILKFDDLKGKTVAVQIGTTSEEAAKKI-----PDVNL 170 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 RV + + RCDA + + A + + +A A+ +G Sbjct: 171 KQLNRVGDAFMDLKNGRCDAIVLEDTVANAYLKEYKDMKILSMKEINTEEGGMAVAVAKG 230 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 + E NI++ + + E Sbjct: 231 NKELVNIINEVIKDLKASGEYD 252 >gi|226310804|ref|YP_002770698.1| glutamine ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] gi|226093752|dbj|BAH42194.1| glutamine ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] Length = 283 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 102/267 (38%), Gaps = 21/267 (7%) Query: 1 MYKDFFVSILCLIILFFTS----------FSTNASILGDIKKRGFLKCGINTGLVGFAEV 50 M +S L S + L IK+R G+ L F Sbjct: 13 MGLVLMLSATALAGCGGGSTTEGGAKGTPAAAGTGTLAKIKERDKFVVGVKYDLNLFGLK 72 Query: 51 KA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 G+ +GFD+D +A++ + D +KI+ + +K R L++ +ID + T Sbjct: 73 DPATGNVEGFDIDIAKAIAKKVLGDENKIELKEVTSKTRIPMLKNGEIDAIIATMTITED 132 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHN 168 R+ + F + + GQ F++ K I+ + + G I G+T+ + Sbjct: 133 RKK--EVDFSDVYFLAGQSFLVKKDSPINGLKDMQKGMKIVTAKGSTSAKNIRASAP--- 187 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + FE E A +A + DA T D + LY + + + + + ++ P Sbjct: 188 -DVEVLEFENYAEAFTALKAGQGDALTTDNALLYGMAKQDPN---YRVTEETFTEEPYGI 243 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELG 255 AI +GD E+ V+ M E Sbjct: 244 AISKGDAEFVKTVNDLLKEMKENGEYD 270 >gi|134093508|ref|YP_001098583.1| glutamate/aspartate periplasmic binding protein ABC transporter [Herminiimonas arsenicoxydans] gi|133737411|emb|CAL60454.1| Glutamate/aspartate periplasmic binding protein precursor [Herminiimonas arsenicoxydans] Length = 300 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 106/264 (40%), Gaps = 11/264 (4%) Query: 1 MY-----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + + ++ + L IK+ G + G + F+ + Sbjct: 1 MKSTTLLKTLIGAAMMSTLMTAAQAQELSGTLKKIKETGEITIGYRESSIPFSFLDDKQQ 60 Query: 56 WKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G+ +D C + + D K++ P+ + R L + ID+ +T ++ R Sbjct: 61 PIGYAMDLCMKIVGTVKADLKLPALKVKLQPVTSSNRIPLLNNGTIDLECGSTTNSIAR- 119 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 +AF P + + K I++++QL G ++ +GTT+ L Y KA N + Sbjct: 120 -QEQVAFGPTYFVINVTAAVKKSSNINTIAQLDGKTVSTTSGTTSVPLLKAYKKAGNAQV 178 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 I + E R A+ D L RP ++ ILP+ + + P + + Sbjct: 179 KEIYGKDHAEAFLLMADDRAAAFVMDDILLAGQIANAKRPGDYKILPESLRQEPYSMMLR 238 Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255 +GD ++ +V + A++ + E+ Sbjct: 239 KGDPQFKALVDKSITAVMQSGEID 262 >gi|170742663|ref|YP_001771318.1| extracellular solute-binding protein [Methylobacterium sp. 4-46] gi|168196937|gb|ACA18884.1| extracellular solute-binding protein family 3 [Methylobacterium sp. 4-46] Length = 301 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 96/256 (37%), Gaps = 7/256 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + ++ S + L IK+ G + G V F+ + N G+ +D Sbjct: 4 KRLLILLVAGFAALPASAEELSGTLKKIKETGAITLGYRDSSVPFSYLDGNQKPVGYAMD 63 Query: 63 FC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C A+ + + +++ P+ + R + + +D+ +T + + ++F Sbjct: 64 ICYKVVDAVKAKLGLPNLEVKLNPVTSATRIPLIANGTVDLECGSTTNNV--DRQKQVSF 121 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + F+ K +S L G ++ +GTT + +Y A+ + + + Sbjct: 122 TNTHFLTASRFVAKKSSNVSKFDDLKGKTVVSTSGTTNIRQINEYNAANKLGITILPAKD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEW 237 E R A+ D L +L ++ P ++I D ISK P + + D + Sbjct: 182 HAEAFLMVETGRAVAFVMDDVLLASLAASSKEPDAYLISTDAISKPEPYGIMLRKDDAPF 241 Query: 238 YNIVSWTHYAMVTAEE 253 +V A + E Sbjct: 242 KKVVDDATAAFYQSPE 257 >gi|289577746|ref|YP_003476373.1| extracellular solute-binding protein family 3 [Thermoanaerobacter italicus Ab9] gi|289527459|gb|ADD01811.1| extracellular solute-binding protein family 3 [Thermoanaerobacter italicus Ab9] Length = 260 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 98/262 (37%), Gaps = 17/262 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGD- 55 M K F ++L + ++ + S L IK++G + G + F K G+ Sbjct: 1 MNKKSFTALLIITLVLSLFLAGCGSKPTNTLEKIKQKGVIVMGTSADFPPFEFHKVEGNK 60 Query: 56 --WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 GFD+D A++ + ++ ++ K ALQS +ID++ T + + Sbjct: 61 DTIVGFDIDIANAIAKRLGVK---LEIKDMDFKGLIPALQSGRIDMIVAGMTPTP--DRA 115 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + Y Q ++ I L G ++ VQ GTT+E + Sbjct: 116 ENVDFSDLYYNSQQVVVVKNDSPILKFDDLKGKTVAVQIGTTSEEAAKKI-----PDVNL 170 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 RV + + RCDA + + A + + +A A+ +G Sbjct: 171 KQLNRVGDAFMDLKNGRCDAIVLEDTVANAYLKEYKDMKILSMKEINTEEGGMAVAVAKG 230 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 + E NI++ + + E Sbjct: 231 NKELVNIINEVIKDLKASGEYD 252 >gi|193885219|pdb|2VHA|A Chain A, Debp gi|193885220|pdb|2VHA|B Chain B, Debp Length = 287 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 88/241 (36%), Gaps = 6/241 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---- 74 + S L I K G + G V F+ G+ D+ A+ A+ Sbjct: 2 AAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 61 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +++ +P+ ++ R LQ+ D +T + R+ F + G + K Sbjct: 62 DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKG 119 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + L G ++ V +GTT+E+ L + M I + + + R A+ Sbjct: 120 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 179 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 180 MMDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEA 239 Query: 255 G 255 Sbjct: 240 E 240 >gi|260597072|ref|YP_003209643.1| glutamate and aspartate transporter subunit [Cronobacter turicensis z3032] gi|260216249|emb|CBA29167.1| Glutamate/aspartate periplasmic-binding protein [Cronobacter turicensis z3032] Length = 314 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 94/259 (36%), Gaps = 10/259 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 + ++L + + + + +AS L IK G + G V F+ G Sbjct: 17 RKLTAAMLVMGLSAGLAHAEDASGGQSTLDKIKANGVIVVGHRESSVPFSYYDNQQKVVG 76 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D+ A+ A+ +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 77 YSQDYSNAIVEAVKKQLNKPDLQVKMIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA 136 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + G ++ K I L G ++ V +GTT+E+ L M I Sbjct: 137 A--FSDTIFVVGTRLLVKKGGPIKDFPDLKGKAVVVTSGTTSEVLLHKLNDEKKMDMRII 194 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D + L + + I+ SK + +GD Sbjct: 195 SAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKQDNWEIVGTPQSKEAYGCMLRKGD 254 Query: 235 TEWYNIVSWTHYAMVTAEE 253 + +V T T+ E Sbjct: 255 ESFKKLVDDTIAQAQTSGE 273 >gi|229095292|ref|ZP_04226284.1| hypothetical protein bcere0020_5490 [Bacillus cereus Rock3-29] gi|228688151|gb|EEL42037.1| hypothetical protein bcere0020_5490 [Bacillus cereus Rock3-29] Length = 275 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 99/269 (36%), Gaps = 23/269 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K F + CL +L + + IKKRG L G+ F Sbjct: 4 MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAIEQIKKRGKLVVGVKNDTNLFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + G +GFDVD +AL+ I D K++ + +K R L++ ID + T Sbjct: 64 LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIRLLKNGDIDAIIATMTIT 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166 R+ + F + + GQ ++ K I + + G + G+T+ + Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKGIDDIKQGVKVLAVKGSTSTNNIRQKSPE 181 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + FE E +A + D T D + LY + + + ++ I + P Sbjct: 182 A----TVLEFENYSEAFTGLKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ +G + ++ M + E Sbjct: 235 GIAVQKGADDLTKEINSLLKDMKASGEYD 263 >gi|167837860|ref|ZP_02464743.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis MSMB43] Length = 297 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 94/259 (36%), Gaps = 9/259 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K V + L + + L IK G + G + F+ + G Sbjct: 1 MKFPKAMLV-VAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQSQQVVG 59 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + DF + A+ +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 60 YSRDFQMKVVDAVKKKLNLSNLQVRNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQA 119 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + G + K GI + L G ++ AGTT+E L + + M + I Sbjct: 120 A--FSDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMNII 177 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D + L + +P E VI+ S+ + + D Sbjct: 178 SAKDHGESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDD 237 Query: 235 TEWYNIVSWTHYAMVTAEE 253 + +V + + E Sbjct: 238 PAFKKVVDDAIAQVEKSGE 256 >gi|94309287|ref|YP_582497.1| extracellular solute-binding protein [Cupriavidus metallidurans CH34] gi|93353139|gb|ABF07228.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 302 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 96/265 (36%), Gaps = 12/265 (4%) Query: 1 MYKDFFVSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + F L+ + + S + L IK G + G T + F+ AN Sbjct: 1 MNQFFMTRAAVLMAVSLGAGSALAVDVAASPTLSKIKSSGTISIGHRTSSIPFSYYDANQ 60 Query: 55 DWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 GF D C + A+ + +++ +P+ ++ R +Q+ +D+ T R Sbjct: 61 KVIGFSQDICDRVIDAVKKETGTPNLQVRMVPVTSQNRQSLVQNGTVDLECGVTTNLKSR 120 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 +AF + G ++ K + LSG ++ AGTT+E L Sbjct: 121 --QQQVAFSTTFFVAGTRLLVKKGSPVHDFGDLSGKAVVTNAGTTSERILRKLNDEKGAN 178 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + E ++ R A+ D L + P++ V++ S + Sbjct: 179 ITIQSAKDYGESFLILQSGRVAAFMMDDVLLSGSRTLAPNPNDWVVVGTPQSFEAYGFMM 238 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELG 255 + D + +V T ++ + E+ Sbjct: 239 RKDDPGFKQVVDATTTGLMRSGEIN 263 >gi|167586129|ref|ZP_02378517.1| extracellular solute-binding protein, family 3 [Burkholderia ubonensis Bu] Length = 297 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 91/258 (35%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + L + + L IK G + G + F+ N G+ Sbjct: 1 MKYHKAILMAAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60 Query: 60 DVD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 D A+ + +++ +P+ ++ R +Q+ +DI +T R Sbjct: 61 SRDFQLKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTER--QQQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 AF + G + K GI + L G ++ AGTT+E L + + I Sbjct: 119 AAFSDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R A+ D + L + +P E VI+ S+ + +GD Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDA 238 Query: 236 EWYNIVSWTHYAMVTAEE 253 ++ +V + + E Sbjct: 239 DFKKVVDDAISQVEKSGE 256 >gi|303249936|ref|ZP_07336138.1| putative ABC transporter, periplasmic binding protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650999|gb|EFL81153.1| putative ABC transporter, periplasmic binding protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 278 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 109/254 (42%), Gaps = 19/254 (7%) Query: 1 MY-----KDFFVSILCLIILFFT--SFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49 M K + + L + + +S + IK++G ++ G+ F Sbjct: 1 MKLSTTLKTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGY 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V ANG +GFDV+ + +++ + P K++++ A R L+S ++D++ N T Sbjct: 61 VDANGKNQGFDVEIAKEIANDLLGSPDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPE 120 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R + F G + K IS + QL G ++ V GTT + F ++ Sbjct: 121 RAEV--VDFATPYMNVALGVVSPKGALISDLKQLEGKTLLVNKGTTADAY----FTKNHP 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + + F++ E A + R A D + ++A + P+ V + + +APA Sbjct: 175 EINLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGPAEQIAPA 232 Query: 230 IIQGDTEWYNIVSW 243 + +G+ ++++ Sbjct: 233 VQKGNQALLDVINK 246 >gi|50120253|ref|YP_049420.1| glutamate and aspartate transporter subunit [Pectobacterium atrosepticum SCRI1043] gi|49610779|emb|CAG74224.1| glutamate/aspartate periplasmic binding protein [Pectobacterium atrosepticum SCRI1043] Length = 298 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 90/259 (34%), Gaps = 6/259 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K IL A L +K G + G V F+ G+ Sbjct: 3 MRKLALSLILLGTAASAAQAEDLAGTLKKVKDNGVIVIGHRESSVPFSYYDNTQKVVGYS 62 Query: 61 VD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 A+ + +++ LP+ ++ R LQ+ D+ +T L R+ Sbjct: 63 QAYSDKIVEAIKKKLDAPNLQVKLLPITSQNRIPLLQNGTFDLECGSTTNNLERQKQAA- 121 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G + K G+ L+G ++ V +GTT+E+ L + MK I Sbjct: 122 -FSNTIFVVGTRLLAKKDSGVKDFPDLAGKTVVVTSGTTSEVLLNKLNEEKQMKMRIISA 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D + L + + I+ S+ + + D + Sbjct: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKNADQWDIVGKAQSEEAYGCMLRKDDPQ 240 Query: 237 WYNIVSWTHYAMVTAEELG 255 + +V T + T+ E Sbjct: 241 FKKLVDDTIAEVQTSGEAD 259 >gi|313144530|ref|ZP_07806723.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter cinaedi CCUG 18818] gi|313129561|gb|EFR47178.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter cinaedi CCUG 18818] Length = 286 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 103/252 (40%), Gaps = 15/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASI---LGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K + + +++ ++ A + IK+ G L+ G+ F + NG Sbjct: 12 MKKWIVAFLATICVIWLSACGDDKAQAQTSRGVEQIKQNGVLRVGVFGDKPPFGFIDENG 71 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+ + L+ + D SKI+++ A R L+S ++DI+ N T RE Sbjct: 72 KNAGFDIYIAKRLAKDLLGDESKIEFILTEAASRVEFLRSNKVDIIMANFTQTKEREE-- 129 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F G + I SV L G + V GTT ++ F ++ + Sbjct: 130 AVDFAKPYMKVSLGVVSPNG-EIKSVEDLKGKKLIVNKGTTADVY----FSKNHPDIELL 184 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +E+ + A + R DA D + + A + + P V +P + + +APA+ +G+ Sbjct: 185 KYEQNTQAFLALKDKRGDALAHDNTLVLAWAM--ENPGFGVGIPTLGEEDVIAPAVKKGN 242 Query: 235 TEWYNIVSWTHY 246 E + Sbjct: 243 VELKTWLDEEIT 254 >gi|303246863|ref|ZP_07333140.1| extracellular solute-binding protein family 3 [Desulfovibrio fructosovorans JJ] gi|302491880|gb|EFL51760.1| extracellular solute-binding protein family 3 [Desulfovibrio fructosovorans JJ] Length = 272 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 10/256 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M K ++S L ++ + + A L DIK RG L G+ F V GF Sbjct: 1 MRKIAWISTLACLLTLLAAAAATAGKLDDIKARGALVAGVKDSQPPFGYVDEKTNQIVGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D +AL+ + ++ P+ + R L +DI++ RE + F Sbjct: 61 EIDLMQALAKRLGVK---LELKPVTSSTRIPMLGQGAVDIVAATMTHKKERE--DQIDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ ++ K G+ SV+ L+G + G+T+E + K I FE Sbjct: 116 ITYFMTGQKLLVKKGGGVQSVADLNGKKVASVKGSTSEQNV----KKAQPGCTVISFETY 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + + A T D S L ++ ++D P + I+ D IS P + + D+++ + Sbjct: 172 PEAFLALKQGKVQAMTTDESILVGIRNSDDHPEKWEIVGDYISPEPYGFGLPENDSDFRD 231 Query: 240 IVSWTHYAMVTAEELG 255 V+ M E Sbjct: 232 YVNLALMNMWETGEYQ 247 >gi|76808998|ref|YP_334805.1| glutamate/aspartate periplasmic binding protein [Burkholderia pseudomallei 1710b] gi|167721209|ref|ZP_02404445.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei DM98] gi|167740181|ref|ZP_02412955.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 14] gi|167817396|ref|ZP_02449076.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 91] gi|167825802|ref|ZP_02457273.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 9] gi|167895874|ref|ZP_02483276.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 7894] gi|167912523|ref|ZP_02499614.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 112] gi|167920474|ref|ZP_02507565.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei BCC215] gi|254190906|ref|ZP_04897412.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|76578451|gb|ABA47926.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei 1710b] gi|157938580|gb|EDO94250.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei Pasteur 52237] Length = 297 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 92/258 (35%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + L + + L IK G + G + F+ N G+ Sbjct: 1 MKFPKAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60 Query: 60 DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 DF + A+ +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 61 SRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAA 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + G + K GI + L G ++ AGTT+E L + + M I Sbjct: 121 --FSDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D + L + +P E VI+ S+ + + D Sbjct: 179 AKDHGESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDP 238 Query: 236 EWYNIVSWTHYAMVTAEE 253 + +V + + E Sbjct: 239 AFKKVVDDAIVQVEKSGE 256 >gi|167904262|ref|ZP_02491467.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei NCTC 13177] Length = 300 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 92/258 (35%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + L + + L IK G + G + F+ N G+ Sbjct: 4 MKFPKAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 63 Query: 60 DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 DF + A+ +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 64 SRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAA 123 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + G + K GI + L G ++ AGTT+E L + + M I Sbjct: 124 --FSDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIIS 181 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D + L + +P E VI+ S+ + + D Sbjct: 182 AKDHGESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIIGKPQSQEAYGCMMRKDDP 241 Query: 236 EWYNIVSWTHYAMVTAEE 253 + +V + + E Sbjct: 242 AFKKVVDDAIVQVEKSGE 259 >gi|167580590|ref|ZP_02373464.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis TXDOH] gi|167618697|ref|ZP_02387328.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis Bt4] gi|257137940|ref|ZP_05586202.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis E264] Length = 297 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 92/258 (35%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + L + + L IK G + G + F+ N G+ Sbjct: 1 MKFPKAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60 Query: 60 DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 DF + A+ +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 61 SRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAA 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + G + K GI + L G ++ AGTT+E L + + M I Sbjct: 121 --FSDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D + L + +P E VI+ S+ + + D Sbjct: 179 AKDHGESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDP 238 Query: 236 EWYNIVSWTHYAMVTAEE 253 + +V + + E Sbjct: 239 AFKKVVDDAIAQVEKSGE 256 >gi|119896733|ref|YP_931946.1| putative glutamine-binding protein [Azoarcus sp. BH72] gi|119669146|emb|CAL93059.1| putative glutamine-binding protein [Azoarcus sp. BH72] Length = 299 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 93/235 (39%), Gaps = 6/235 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIFDDPSKIQY 80 L IK G + G V F+ + A+ G+ +D C A+ + +++Y Sbjct: 28 GTLKKIKDSGTITVGHRESSVPFSYLDADQKPVGYAMDLCAKVVDAVKDELKLPKLEVKY 87 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + ++ R +Q+ IDI +T ++ R+ +G F + + K GI + Sbjct: 88 QAVTSQNRIPLMQNGTIDIECGSTTNSVQRQQQVG--FSVNYFVTSVRMAVRKDSGIKDI 145 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G + GTT++ + K ++ I + + + R A+ D Sbjct: 146 GDLNGKPVATTTGTTSDALIKQNEKGKSIDVRNIYGKDHADSFLMVESGRAAAFVMDDIL 205 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L L ++ P+ + I+ + P + + DTE+ +V ++ + E Sbjct: 206 LAGLIASSKNPAAYEIVGPSLRDEPYGVMLRKDDTEFKAVVDKALTGLMKSGEAE 260 >gi|315638784|ref|ZP_07893956.1| ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter upsaliensis JV21] gi|315481002|gb|EFU71634.1| ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter upsaliensis JV21] Length = 282 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 116/277 (41%), Gaps = 14/277 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + +F + ++ S + IK G +K G+ F V G + Sbjct: 6 MKKILLSIFTAFVAVFLAACDSSESGVNSIERIKNAGVVKIGVFGDKPPFGYVDEKGANQ 65 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+D+ F + ++ + D +K++++ + A R L+S ++DI+ N T R + Sbjct: 66 GYDIIFAKRIAKELLGDENKVEFVLVEAANRVEFLKSNKVDIILANFTQTPERAE--QVD 123 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F G ++ + I SV L ++ + GTT + F + + F+ Sbjct: 124 FALPYMKVALGVVVPEDSEIKSVEDLKDKTLILNKGTTADAY----FTKNYADIKTLKFD 179 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + E AA R DA D + L+A +RP V++ ++ ++ +APA+ +GD E Sbjct: 180 QNTETFAALMDKRGDALAHDNTLLFAW--VKERPDYKVVIKELGNQDVIAPAVKKGDKEL 237 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + + AE+ K ++ K D++ Sbjct: 238 KEFIDNLII-SLAAEQF--FHKAYDESLKAHFGADIK 271 >gi|224438086|ref|ZP_03659025.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter cinaedi CCUG 18818] Length = 275 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 103/252 (40%), Gaps = 15/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASI---LGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K + + +++ ++ A + IK+ G L+ G+ F + NG Sbjct: 1 MKKWIVAFLATICVIWLSACGDDKAQAQTSRGVEQIKQNGVLRVGVFGDKPPFGFIDENG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+ + L+ + D SKI+++ A R L+S ++DI+ N T RE Sbjct: 61 KNAGFDIYIAKRLAKDLLGDESKIEFILTEAASRVEFLRSNKVDIIMANFTQTKEREE-- 118 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F G + I SV L G + V GTT ++ F ++ + Sbjct: 119 AVDFAKPYMKVSLGVVSPNG-EIKSVEDLKGKKLIVNKGTTADVY----FSKNHPDIELL 173 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +E+ + A + R DA D + + A + + P V +P + + +APA+ +G+ Sbjct: 174 KYEQNTQAFLALKDKRGDALAHDNTLVLAWAM--ENPGFGVGIPTLGEEDVIAPAVKKGN 231 Query: 235 TEWYNIVSWTHY 246 E + Sbjct: 232 VELKTWLDEEIT 243 >gi|53720532|ref|YP_109518.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei K96243] gi|52210946|emb|CAH36934.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei K96243] Length = 300 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 92/258 (35%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + L + + L IK G + G + F+ N G+ Sbjct: 4 MKFPKAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 63 Query: 60 DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 DF + A+ +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 64 SRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAA 123 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + G + K GI + L G ++ AGTT+E L + + M I Sbjct: 124 --FSDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIIS 181 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D + L + +P E VI+ S+ + + D Sbjct: 182 AKDHGESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDP 241 Query: 236 EWYNIVSWTHYAMVTAEE 253 + +V + + E Sbjct: 242 AFKKVVDDAIVQVEKSGE 259 >gi|165977129|ref|YP_001652722.1| putative ABC transporter, periplasmic binding protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165877230|gb|ABY70278.1| putative ABC transporter, periplasmic binding protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 278 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 109/254 (42%), Gaps = 19/254 (7%) Query: 1 MY-----KDFFVSILCLIILFFT--SFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49 M K + + L + + +S + IK++G ++ G+ F Sbjct: 1 MKLSTTLKTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGY 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V ANG +GFDV+ + +++ + P K++++ A R L+S ++D++ N T Sbjct: 61 VDANGKSQGFDVEIAKEIANDLLGSPDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPE 120 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R + F G + K IS + QL G ++ V GTT + F ++ Sbjct: 121 RAEV--VDFATPYMNVALGVVSPKGALISDLKQLEGKTLLVNKGTTADAY----FTKNHP 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + + F++ E A + R A D + ++A + P+ V + + +APA Sbjct: 175 EINLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGPAEQIAPA 232 Query: 230 IIQGDTEWYNIVSW 243 + +G+ ++++ Sbjct: 233 VQKGNQALLDVINK 246 >gi|126439062|ref|YP_001060407.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 668] gi|126452231|ref|YP_001067668.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1106a] gi|134280250|ref|ZP_01766961.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 305] gi|217420638|ref|ZP_03452143.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 576] gi|226196796|ref|ZP_03792375.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei Pakistan 9] gi|237813798|ref|YP_002898249.1| glutamate/aspartate periplasmic-binding protein [Burkholderia pseudomallei MSHR346] gi|242316081|ref|ZP_04815097.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1106b] gi|254180661|ref|ZP_04887259.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1655] gi|254299254|ref|ZP_04966704.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 406e] gi|126218555|gb|ABN82061.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 668] gi|126225873|gb|ABN89413.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1106a] gi|134248257|gb|EBA48340.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 305] gi|157809157|gb|EDO86327.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 406e] gi|184211200|gb|EDU08243.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1655] gi|217396050|gb|EEC36067.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 576] gi|225931056|gb|EEH27064.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei Pakistan 9] gi|237504398|gb|ACQ96716.1| glutamate/aspartate periplasmic-binding protein [Burkholderia pseudomallei MSHR346] gi|242139320|gb|EES25722.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1106b] Length = 328 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 92/258 (35%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + L + + L IK G + G + F+ N G+ Sbjct: 32 MKFPKAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 91 Query: 60 DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 DF + A+ +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 92 SRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAA 151 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + G + K GI + L G ++ AGTT+E L + + M I Sbjct: 152 --FSDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIIS 209 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D + L + +P E VI+ S+ + + D Sbjct: 210 AKDHGESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDP 269 Query: 236 EWYNIVSWTHYAMVTAEE 253 + +V + + E Sbjct: 270 AFKKVVDDAIVQVEKSGE 287 >gi|146310840|ref|YP_001175914.1| glutamate and aspartate transporter subunit [Enterobacter sp. 638] gi|145317716|gb|ABP59863.1| L-glutamate-binding protein / L-aspartate-binding protein [Enterobacter sp. 638] Length = 301 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 93/261 (35%), Gaps = 10/261 (3%) Query: 3 KDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 + ++L + + + S L I K G + G V F+ G Sbjct: 4 RKLATAMLVMGMSASVVHAEDAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNTQKVVG 63 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D+ A+ A+ +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 64 YSQDYSNAIVEAVKKKLNKPDLEVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA 123 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + G + K I + L G ++ V +GTT+E+ L + M I Sbjct: 124 A--FSDTIFVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLHKLNEEKKMDMRII 181 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D + L + +P I+ SK + + D Sbjct: 182 SAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGTAQSKEAYGCMLRKDD 241 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 ++ ++ T T+ E Sbjct: 242 ADFKKLIDDTIAKTQTSGEAE 262 >gi|254253239|ref|ZP_04946557.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] gi|124895848|gb|EAY69728.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] Length = 300 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 94/258 (36%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + L + + L IK G + G + F+ N G+ Sbjct: 4 MKYHKAVLMAAALCAFASGAQAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 63 Query: 60 DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 DF + A+ +++ +P+ ++ R +Q+ +DI +T L R Sbjct: 64 SRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLER--QQQ 121 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 AF + G + K GI + L G ++ AGTT+E L M + I Sbjct: 122 AAFSNTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLRKMNNDKQMGMNIIS 181 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R A+ D + L + +P E VI+ S+ + +GDT Sbjct: 182 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDT 241 Query: 236 EWYNIVSWTHYAMVTAEE 253 E+ +V + + E Sbjct: 242 EFKKVVDDAIAQVEKSGE 259 >gi|150017371|ref|YP_001309625.1| extracellular solute-binding protein [Clostridium beijerinckii NCIMB 8052] gi|149903836|gb|ABR34669.1| extracellular solute-binding protein, family 3 [Clostridium beijerinckii NCIMB 8052] Length = 290 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 68/298 (22%), Positives = 125/298 (41%), Gaps = 27/298 (9%) Query: 1 MY--KDFFVSILCLIILFFTSFS--------------TNASILGDIKKRGFLKCGINTGL 44 M K ++L ++ + ++S L DIKKRG +K G+ + Sbjct: 1 MKSIKKIVAALLLSTVVVGSFVGCGNSAQTNNGDSNKASSSSLEDIKKRGTIKIGVFSDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V + G +GFDV + + + D SK++++ ++A R L+SK++DI+ N Sbjct: 61 APFGYVDSEGKNQGFDVYVAKRFAKDLLGDESKVEFVLVDAASRVSYLESKKVDIIMANF 120 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + I+S QL G + V GTT E + Sbjct: 121 TVTDERKE--KVDFANPYMKVSLGVVSPDGAKITSEDQLKGKKVIVAKGTTAETYMT--- 175 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 ++ + +E+ EI A + R DA D + + A D P V +P + S Sbjct: 176 -KNHPDVELVKYEQYSEIFQALKDKRGDAILSDNTEVIAWA--KDNPGFSVGIPSLGSTD 232 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKS 282 +APA+ +G+TE + ++ ++ + K ++ K + + L ++ Sbjct: 233 TIAPAVTKGNTELRDWINTELESL---GKENFVHKAYDETLKSVYGAEFEDSLVVEGG 287 >gi|171321021|ref|ZP_02910008.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171093718|gb|EDT38862.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 297 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 95/258 (36%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + + L + + L IK G + G + F+ N G+ Sbjct: 1 MKYQKAVLMVAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60 Query: 60 DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +F + A+ +++ +P+ ++ R +Q+ +DI +T R Sbjct: 61 SREFQMKIVDAVKKKLSLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTER--QQQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 AF + G + K G+ + L G ++ AGTT+E L + + I Sbjct: 119 AAFSDTIFVIGTRLMTKKDSGVKDFTDLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R A+ D + L + +P E VI+ S+ + +GDT Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDT 238 Query: 236 EWYNIVSWTHYAMVTAEE 253 ++ +V + + E Sbjct: 239 DFKKVVDDAISQVEKSGE 256 >gi|322513416|ref|ZP_08066532.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Actinobacillus ureae ATCC 25976] gi|322120804|gb|EFX92674.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Actinobacillus ureae ATCC 25976] Length = 277 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 105/253 (41%), Gaps = 18/253 (7%) Query: 1 MY-----KDFFVSILCLIILFFT-----SFSTNASILGDIKKRGFLKCGINTGLVGFAEV 50 M K + + L + S+ + IK G ++ G+ F V Sbjct: 1 MKLNTTLKTLLATAIAAFALTACDNGNNAPSSAQDSVAQIKANGVIRIGVFGDKPPFGYV 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 ANG +GFDV+ + +++ + P K++++ A R L+S ++D++ N T R Sbjct: 61 DANGKSQGFDVEIAKEIANDLLGSPDKVEFVLTEAANRVKYLKSNKVDLILANFTKTPER 120 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + F G + K I+ + QL G ++ V GTT + F ++ + Sbjct: 121 AEV--VDFAAPYMNVALGVVSPKGALITDLKQLEGKTLLVNKGTTGDAY----FTKNHPE 174 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + F++ E A + R A D + ++A + P+ V + + +APA+ Sbjct: 175 INLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGLAEQIAPAV 232 Query: 231 IQGDTEWYNIVSW 243 +G+ +++ Sbjct: 233 QKGNQALLEVINK 245 >gi|117619722|ref|YP_857305.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561129|gb|ABK38077.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 283 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 92/249 (36%), Gaps = 18/249 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +S L L L + + S L + +RG L+ G + G F G + GFD Sbjct: 22 MIKKLILSTLLLCGL---ANAAPTSTLDAVLERGVLRVGFDAGYQPFEMTNKQGQYIGFD 78 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + ++++ AL + + D++ T R +L + F Sbjct: 79 VDLAKMVAKEMGVK---VEFVNTAWDGIIPALLTDKFDVIMGGMTVTPQR--NLRVNFAD 133 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K I S + L+ V+ GTT E + + F Sbjct: 134 PYIVVGQTIVLRKDKAGEIKSFTDLNDPKYKIAVKLGTTGEQAVKRLIPKA----TLLQF 189 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E ++ + DA+ D+ N H L + PLA AI +GD + Sbjct: 190 ETQDDAKLEVINGKVDAFVYDLPYNAIFATQNKGAVVH--LDKPFTFEPLAWAIRKGDQD 247 Query: 237 WYNIVSWTH 245 N + Sbjct: 248 TLNWFNNYL 256 >gi|307253362|ref|ZP_07535233.1| hypothetical protein appser6_18560 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859041|gb|EFM91083.1| hypothetical protein appser6_18560 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 298 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 109/254 (42%), Gaps = 19/254 (7%) Query: 1 MY-----KDFFVSILCLIILFFT--SFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49 M K + + L + + +S + IK++G ++ G+ F Sbjct: 21 MKLSTTLKTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGY 80 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V ANG +GFDV+ + +++ + P K++++ A R L+S ++D++ N T Sbjct: 81 VDANGKNQGFDVEIAKEIANDLLGSPDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPE 140 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R + F G + K IS + QL G ++ V GTT + F ++ Sbjct: 141 RAEV--VDFATPYMNVALGVVSPKGALISDLKQLEGKTLLVNKGTTADAY----FTKNHP 194 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + + F++ E A + R A D + ++A + P+ V + + +APA Sbjct: 195 EINLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGPAEQIAPA 252 Query: 230 IIQGDTEWYNIVSW 243 + +G+ ++++ Sbjct: 253 VQKGNQALLDVINK 266 >gi|294338803|emb|CAZ87137.1| Glutamate/aspartate periplasmic binding protein ABC transporter [Thiomonas sp. 3As] Length = 297 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 7/260 (2%) Query: 1 MYKDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F ++IL + + L +K+ + G + F+ + NG G+ Sbjct: 1 MIKKLFGLTILAAAAISCAQAAELTGTLKKVKETNSITVGYRESSIPFSYLDNNGKPIGY 60 Query: 60 DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 ++ C + A+ D K+ Y P+ + R L++ ID+ +T ++ R+ + Sbjct: 61 AMELCGKVVDAVKADLKMPGLKVNYTPVTSSNRIPLLENGTIDLECGSTTNSVARQKQVA 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F P + + K GI+ +QL+G +I +GTT L Y K +M++ I Sbjct: 121 --FGPTYFVINVTAAVKKDSGINDFAQLAGKTIVTTSGTTAVPLLKKYEKTKDMEFKEIY 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D L + P+ + ILP + + P + + + D Sbjct: 179 GKDHAESFLLMADGRASAFVMDDILLAGQIANSKDPAAYKILPGSLRQEPYSMMLRKDDP 238 Query: 236 EWYNIVSWTHYAMVTAEELG 255 ++ +V T ++ + E+ Sbjct: 239 QFKALVDKTIDGVMKSGEIN 258 >gi|212712951|ref|ZP_03321079.1| hypothetical protein PROVALCAL_04049 [Providencia alcalifaciens DSM 30120] gi|212684429|gb|EEB43957.1| hypothetical protein PROVALCAL_04049 [Providencia alcalifaciens DSM 30120] Length = 297 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 93/245 (37%), Gaps = 10/245 (4%) Query: 9 ILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 ++ ++L + + A L IK G + G V F+ N G+ D+ Sbjct: 6 LVLTMMLLGATCAVQAEELNGTLKKIKDNGVIVVGHRESSVPFSYYDNNQKVVGYSQDYS 65 Query: 65 RALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + A+ +++ +P+ ++ R LQ+ D +T L R+ F Sbjct: 66 NLIVDAVKKKLNMPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAA--FSN 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + G + K GI + L+G ++ V +GTT+E+ L NMK I + Sbjct: 124 TIFVVGTRLLAKKDSGIKDFADLAGKNVVVTSGTTSEVILNKLNDEKNMKMRIISAKDHG 183 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + R A+ D + L + +P I+ ++ + + D ++ + Sbjct: 184 DSFRTLESGRAVAFMMDDALLAGERAKAKQPDIWEIVAKPQTEEAYGCMLRKDDPQFKAL 243 Query: 241 VSWTH 245 V T Sbjct: 244 VDDTI 248 >gi|89897433|ref|YP_520920.1| hypothetical protein DSY4687 [Desulfitobacterium hafniense Y51] gi|89336881|dbj|BAE86476.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 276 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 8/221 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L +IK+RG L+ G+ + F V ANG +GFDV+ R + + D SK++++ + Sbjct: 27 GSLEEIKQRGTLRIGVFSDKPPFGYVDANGQNQGFDVEIARRFAKDLLGDESKVEFVLVE 86 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L+S ++DI+ N T R + F G + I+S+ QL Sbjct: 87 AANRVPYLESNKVDIIMANFTVTEER--KQKVDFANPYMKVALGIVSPDGALITSIDQLQ 144 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G + V GTT DY ++ + +++ E A + R A D + + A Sbjct: 145 GKKVIVNKGTTA----QDYLTKNHPDLELLKYDQNTEAFEALKDGRGAALAHDNTEVLAW 200 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 P V +P + S +APA+ +GDTE N ++ Sbjct: 201 A--KSNPGFTVGVPALGSTDTIAPAVKKGDTELLNWINQEL 239 >gi|322418597|ref|YP_004197820.1| family 3 extracellular solute-binding protein [Geobacter sp. M18] gi|320124984|gb|ADW12544.1| extracellular solute-binding protein family 3 [Geobacter sp. M18] Length = 273 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 94/258 (36%), Gaps = 13/258 (5%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWK 57 M + + + L + A L ++KK+G L G+ L F V + Sbjct: 1 MKRLAAVVMGLALLGSFGKAMAAAPADTLAEVKKKGVLVAGVKDSLPPFGYVDEKSREIV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+DVDF +A++ + ++ P+ + R L IDI++ R +G Sbjct: 61 GYDVDFVKAIAKKLGVK---VELKPVTSASRMPQLTEGNIDIIAATMTKNPERAKQIG-- 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + GQ FI K + + L G I G+T+E + + F+ Sbjct: 116 FSHTYFATGQKFITVKG-KVKGLKDLQGKKIGTAKGSTSEQNVKTALPTA----TVLAFD 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + A + + A T D + L + ++ I IS P + + D ++ Sbjct: 171 DYPQAFLALQQGKVAAVTTDEAILAGILAKAPNKAKFEIPNLQISNEPYGLGMRKDDAKF 230 Query: 238 YNIVSWTHYAMVTAEELG 255 V T M + E Sbjct: 231 IAFVDKTILEMEKSGEAR 248 >gi|33591321|ref|NP_878965.1| amino-acid ABC transporter binding protein precursor [Bordetella pertussis Tohama I] gi|33570963|emb|CAE40435.1| amino-acid ABC transporter binding protein precursor [Bordetella pertussis Tohama I] Length = 299 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 93/251 (37%), Gaps = 6/251 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K V L+ + ++ + L IK G + G + F+ + G+ ++ Sbjct: 2 KISTVFFAALVGVAASAPAHAEGRLDKIKSSGTITIGHRDASIPFSYLDDKQKPIGYSME 61 Query: 63 FCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C A+ + + K+ +P+ + R + + +D++ + T+ R +AF Sbjct: 62 ICEKAVEAIKAKLGMAQIKVNLVPVTSSTRIPLVANGTVDLVCGSATNTVER--QQQVAF 119 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 P T+ F K + + + G ++ AGT+ L + ++ I + Sbjct: 120 APTTFVTATRFAAKKSSNLKKLDDMKGKTVVSTAGTSNIRWLTQANEKDSLDMRIIPTKD 179 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R A+ D L L T +P E +I D + P A + + D + Sbjct: 180 HPAAMLTVANGRAAAFFMDDVLLAGLVATERKPDEWMISEDTYTVEPYALILPKDDPAFK 239 Query: 239 NIVSWTHYAMV 249 +V T M+ Sbjct: 240 KVVDDTVTGMM 250 >gi|260891043|ref|ZP_05902306.1| CjaA protein [Leptotrichia hofstadii F0254] gi|260859070|gb|EEX73570.1| CjaA protein [Leptotrichia hofstadii F0254] Length = 279 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 107/256 (41%), Gaps = 15/256 (5%) Query: 1 MYKDF-----FVSILCLIILFFTSF--STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K+F ++IL L + + S + IKK G ++ G+ F V N Sbjct: 1 MKKNFERLVKIIAILVLGVFAISCGKGSAEPGSIEAIKKAGKIRIGVFGDKPPFGFVDEN 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G +G+D+ + L+ + D +KI+++ L A R L S ++DI+ N T R Sbjct: 61 GKNQGYDIYLAKRLAKDLLGDENKIEFITLEAANRVEYLLSNKVDIILANFTVTDER--K 118 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F G + + I V +L G + V GTT E+ F ++ Sbjct: 119 QKVDFAKPYMKVSLGIVSPEGAPIKDVKELKGKKLIVNKGTTAEIY----FTKNHPDIEL 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + +++ E A R A D + ++A + P V + + + +APA+ +G Sbjct: 175 LKYDQNTETFNALLDKRGAALAHDNTLVFAWAT--ENPGFVVDIKQLGEQDYIAPAVRKG 232 Query: 234 DTEWYNIVSWTHYAMV 249 + E + ++ A+ Sbjct: 233 NKELLDWLNTEIDALT 248 >gi|323527327|ref|YP_004229480.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323384329|gb|ADX56420.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 297 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 99/260 (38%), Gaps = 7/260 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L + + + +A L IK G + G + F+ + G+ Sbjct: 1 MKVKKAALLLATLGLFTVGAHAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGY 60 Query: 60 DVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +F A+ + K++ +P+ ++ R +Q+ +D+ +T R Sbjct: 61 SQEFALKVVDAVKQKLNAPNLKVKLIPVTSQNRIPLVQNGTVDMECGSTTNNAER--QQQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 +AF + G + K GI + L G ++ AGTT+E L + NM + I Sbjct: 119 VAFSNTIFVIGTRLMTKKDSGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKNMGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D + L + ++ P + VI+ S + + D Sbjct: 179 AKDHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMLRKNDP 238 Query: 236 EWYNIVSWTHYAMVTAEELG 255 E+ +V + T+ E Sbjct: 239 EFKKVVDEAIAKVETSGEAD 258 >gi|221069701|ref|ZP_03545806.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] gi|220714724|gb|EED70092.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] Length = 293 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 96/256 (37%), Gaps = 7/256 (2%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++LC + + +A L ++ G + V F+ + NG G V+ Sbjct: 2 QLHSTVLCAALGLGFLGAAHADTLAKVRDSGRITLAYRESSVPFSYLD-NGKPIGMTVEL 60 Query: 64 CRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +A++ A+ ++++ + ++ R L + ID+ +T +R +G F Sbjct: 61 SQAVAEAVKKVLNLPALEVRWQAVTSQNRMPLLANGTIDLECGSTTNNTVRAKEVG--FA 118 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ G ++ K GI + + L G + + GTT L + ++ + Sbjct: 119 INHFYTGTRLLVKKSSGIQNYADLKGKTASITTGTTNLQVLRKANAEQGWGMNIVMAKDH 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R A+ D LY L P + ++ D + P A + + D ++ Sbjct: 179 ADGFLLVENDRAAAFGMDDILLYGLIANAKNPKDFHVVADALQVEPYACMLRKDDPQFKQ 238 Query: 240 IVSWTHYAMVTAEELG 255 +V M+ + Sbjct: 239 LVDGVIGDMMKSGAFA 254 >gi|307246618|ref|ZP_07528689.1| hypothetical protein appser1_18140 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306852490|gb|EFM84724.1| hypothetical protein appser1_18140 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 298 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 109/254 (42%), Gaps = 19/254 (7%) Query: 1 MY-----KDFFVSILCLIILFFT--SFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49 M K + + L + + +S + IK++G ++ G+ F Sbjct: 21 MKLSTTLKTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGY 80 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V ANG +GFDV+ + +++ + P K++++ A R L+S ++D++ N T Sbjct: 81 VDANGKNQGFDVEIAKEIANDLLGSPDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPE 140 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R + F G + K I+ + QL G ++ V GTT + F ++ Sbjct: 141 RAEV--VDFAAPYMNVALGVVSPKGALITDLKQLEGKTLLVNKGTTADAY----FTKNHP 194 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + + F++ E A + R A D + ++A + P+ V + + +APA Sbjct: 195 EINLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGPAEQIAPA 252 Query: 230 IIQGDTEWYNIVSW 243 + +G+ ++++ Sbjct: 253 VQKGNQALLDVINK 266 >gi|170703105|ref|ZP_02893924.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170131984|gb|EDT00493.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 297 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 94/258 (36%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + L + + L IK G + G + F+ N G+ Sbjct: 1 MKYHKAVLMVAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60 Query: 60 DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +F + A+ +++ +P+ ++ R +Q+ +DI +T R Sbjct: 61 SREFQMKIVDAVKKKLSLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTER--QQQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 AF + G + K G+ + L G ++ AGTT+E L + + I Sbjct: 119 AAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R A+ D + L + +P E VI+ S+ + +GDT Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDT 238 Query: 236 EWYNIVSWTHYAMVTAEE 253 ++ +V + + E Sbjct: 239 DFKKVVDDAISQVEKSGE 256 >gi|307730962|ref|YP_003908186.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] gi|307585497|gb|ADN58895.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] Length = 297 Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 99/260 (38%), Gaps = 7/260 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L + + + +A L IK G + G + F+ + G+ Sbjct: 1 MKVKKAALLLATLGLFTVGAHAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGY 60 Query: 60 DVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +F A+ + K++ +P+ ++ R +Q+ +D+ +T R Sbjct: 61 SQEFALKVVEAVKQKLNAPNLKVKLIPVTSQNRIPLVQNGTVDMECGSTTNNAER--QQQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 +AF + G + K GI + L G ++ AGTT+E L + NM + I Sbjct: 119 VAFSNTIFVIGTRLMTKKDSGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKNMGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D + L + ++ P + VI+ S + + D Sbjct: 179 AKDHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMLRKNDP 238 Query: 236 EWYNIVSWTHYAMVTAEELG 255 E+ +V + T+ E Sbjct: 239 EFKKVVDDAIAKLETSGEAD 258 >gi|330501772|ref|YP_004378641.1| extracellular solute-binding protein family 3 [Pseudomonas mendocina NK-01] gi|328916058|gb|AEB56889.1| extracellular solute-binding protein family 3 [Pseudomonas mendocina NK-01] Length = 299 Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 98/259 (37%), Gaps = 7/259 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +++ S L I + G + G G V F+ G+ Sbjct: 1 MKK-ILAASSMMLMFAAAGVSAQEGTLAKIAELGEISVGHRDGAVPFSYYDDQQRPVGYA 59 Query: 61 VDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D C + AI + + YLP+ R L + ID+ T R+ + Sbjct: 60 MDLCAKVVEAIKLKLDEPDLKVSYLPVTGATRMPLLANGTIDMECGTTTNNAERQR--QV 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 +F + G + K + +++ G ++ AGTT+ +++ A N+ + + Sbjct: 118 SFSNTYFVAGVRILSKKNAPVETMADAKGKTVVTLAGTTSVKVISEINAAQNLGLNVLSV 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + E + R A D ++ T+ P + ++ + +S P + +GD Sbjct: 178 KDLAEGMLTLQTERAVALIFDDVSIAGAAATSKNPDDFIMSAEPLSVEPYGIMLRRGDDA 237 Query: 237 WYNIVSWTHYAMVTAEELG 255 + +V+ T + E+ Sbjct: 238 FKELVNATLDELYATGEIN 256 >gi|254199128|ref|ZP_04905543.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei S13] gi|254261815|ref|ZP_04952869.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1710a] gi|169656958|gb|EDS88355.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei S13] gi|254220504|gb|EET09888.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1710a] Length = 363 Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 92/258 (35%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + L + + L IK G + G + F+ N G+ Sbjct: 67 MKFPKAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 126 Query: 60 DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 DF + A+ +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 127 SRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAA 186 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + G + K GI + L G ++ AGTT+E L + + M I Sbjct: 187 --FSDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMSIIS 244 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D + L + +P E VI+ S+ + + D Sbjct: 245 AKDHGESFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDP 304 Query: 236 EWYNIVSWTHYAMVTAEE 253 + +V + + E Sbjct: 305 AFKKVVDDAIVQVEKSGE 322 >gi|325525013|gb|EGD02925.1| extracellular solute-binding protein [Burkholderia sp. TJI49] Length = 297 Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 92/258 (35%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + L + + L IK G + G + F+ N G+ Sbjct: 1 MKYHKAVLMVAALCAFASGAQAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60 Query: 60 DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +F + A+ +++ +P+ ++ R +Q+ +DI +T R Sbjct: 61 SREFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNAER--QQQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 AF + G + K GI L G ++ AGTT+E L M + I Sbjct: 119 AAFSDTIFVIGTRLMTKKDSGIKDFGDLKGKTVVTTAGTTSERLLRKMNNEKQMGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R A+ D + L + +P E VI+ S+ + +GD Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDA 238 Query: 236 EWYNIVSWTHYAMVTAEE 253 ++ +V + + E Sbjct: 239 DFKKVVDDAIAQVEKSGE 256 >gi|296134850|ref|YP_003642092.1| extracellular solute-binding protein family 3 [Thiomonas intermedia K12] gi|295794972|gb|ADG29762.1| extracellular solute-binding protein family 3 [Thiomonas intermedia K12] Length = 297 Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 108/260 (41%), Gaps = 7/260 (2%) Query: 1 MYKDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F ++IL + + L +K+ + G + F+ + NG G+ Sbjct: 1 MIKKLFGLTILAAAAMSCAQAAELTGTLKKVKETNSITVGYRESSIPFSYLDNNGKPIGY 60 Query: 60 DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 ++ C + A+ D K+ Y P+ + R L++ ID+ +T ++ R+ + Sbjct: 61 AMELCGKVVDAVKADLKMPGLKVNYTPVTSSNRIPLLENGTIDLECGSTTNSVARQKQVA 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F P + + K GIS +QL+G +I +GTT L Y K +M++ I Sbjct: 121 --FGPTYFVINVTAAVKKDSGISDFAQLAGKTIVTTSGTTAVPLLKKYEKTKDMEFKEIY 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D L + P+ + ILP + + P + + + D Sbjct: 179 GKDHAESFLLMADGRAAAFVMDDILLAGQIANSKDPAAYKILPGSLRQEPYSMMLRKDDP 238 Query: 236 EWYNIVSWTHYAMVTAEELG 255 ++ +V T ++ + E+ Sbjct: 239 QFKALVDKTIDGVMKSGEIN 258 >gi|307265619|ref|ZP_07547173.1| extracellular solute-binding protein family 3 [Thermoanaerobacter wiegelii Rt8.B1] gi|306919417|gb|EFN49637.1| extracellular solute-binding protein family 3 [Thermoanaerobacter wiegelii Rt8.B1] Length = 261 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 96/262 (36%), Gaps = 17/262 (6%) Query: 1 MYKD----FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD- 55 M K F + L ++ + A+ L IK++G + G + + K G+ Sbjct: 1 MNKKTLFVFLTMTIILGLILSACGTKPANTLDKIKEKGVIVMGTSADFPPYEFHKVEGNK 60 Query: 56 --WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 GFDVD A++ + ++ ++ K ALQ+ +ID++ T R Sbjct: 61 DTIVGFDVDIANAIAKKLGVK---LEIKDMDFKGLIPALQAGRIDMIVAGMTPTPERAK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + Y Q ++ IS L G ++ VQ GTT+E + Sbjct: 117 -SVDFSDLYYNSQQVVVVKNDSPISKFDDLKGKTVAVQIGTTSEEAAKKI-----PDVNL 170 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 RV + + RCDA + + A + + A A+ +G Sbjct: 171 KQLNRVGDAFMDLKNGRCDAIVLENTVANAYLKEYKDMKMVFMKEINTVDNGSAVAVAKG 230 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 + E NI++ + + E Sbjct: 231 NKELVNIINEVIKELKASGEYD 252 >gi|93005165|ref|YP_579602.1| extracellular solute-binding protein [Psychrobacter cryohalolentis K5] gi|92392843|gb|ABE74118.1| extracellular solute-binding protein, family 3 [Psychrobacter cryohalolentis K5] Length = 330 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 87/242 (35%), Gaps = 7/242 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDF----CRALSSAIFD 73 + + L IK+ G + G + F+ + G+ D A+ + Sbjct: 46 ATANTNGTLDKIKESGTIVVGHRDSSIPFSYIADDPNQPIGYAHDLEMKVVEAVKQKLNM 105 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 KI+Y + ++ R +Q+ +D +T R+ + F + G + K Sbjct: 106 PDLKIRYNLITSQTRIPLVQNGTVDFECGSTTNNEERQKQVA--FSNGFFEIGTRLLTKK 163 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 GI L G ++ AGTT+E + +Y M + I + E R DA Sbjct: 164 DSGIQGFDDLKGKTLVTTAGTTSERYIREYNDDKKMNINVISAKDHGEGFLMLENGRADA 223 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D L K P E VI+ + S + + D E+ +V + + E Sbjct: 224 FMMDDVLLAGEKAKAKNPDEWVIVGEPQSFEIYGCMMRKDDPEFKAVVDEALANVFKSGE 283 Query: 254 LG 255 + Sbjct: 284 IN 285 >gi|260866803|ref|YP_003233205.1| periplasmic-binding component GltI [Escherichia coli O111:H- str. 11128] gi|257763159|dbj|BAI34654.1| periplasmic-binding component GltI [Escherichia coli O111:H- str. 11128] gi|323179868|gb|EFZ65425.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli 1180] Length = 302 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 88/241 (36%), Gaps = 6/241 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---- 74 + S L I K G + G V F+ G+ D+ A+ A+ Sbjct: 25 AAPVAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 84 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +++ +P+ ++ R LQ+ D +T + R+ F + G + K Sbjct: 85 DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKS 142 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + L G ++ V +GTT+E+ L + M I + + + R A+ Sbjct: 143 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 202 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 203 MMDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEA 262 Query: 255 G 255 Sbjct: 263 E 263 >gi|237752493|ref|ZP_04582973.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter winghamensis ATCC BAA-430] gi|229375982|gb|EEO26073.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter winghamensis ATCC BAA-430] Length = 284 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 15/248 (6%) Query: 1 MYKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M F L + + + ST+ L IK++G + G+ + F V G Sbjct: 10 MKNLIFKIFLAIFVAGIFAGCENNTQSTSEDRLAKIKQKGVITIGVFSDKPPFGFVNDKG 69 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFDV R L+ ++ D SK+++ + A R L+S ++D++ N T R Sbjct: 70 ENDGFDVYVARELAKSLLGDASKVKFELVEAASRVEFLKSGKVDLIMANFTKTPERAEV- 128 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F G + K+ I V+ L G + V GTT + F ++ + + Sbjct: 129 -VDFATPYMKVALGIVS-KEGAIKDVADLKGKKLIVNKGTTADFY----FTKNHPEIELV 182 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F++ E A + R DA D L+A + P+ V + + ++ +APA+ +GD Sbjct: 183 KFDQNTEAFLALKDGRGDALAHDNLLLFAWA--KENPNFAVAISKLGNEDVIAPAVKKGD 240 Query: 235 TEWYNIVS 242 V+ Sbjct: 241 KALLEWVN 248 >gi|83312881|ref|YP_423145.1| amino acid ABC transporter periplasmic protein [Magnetospirillum magneticum AMB-1] gi|82947722|dbj|BAE52586.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Magnetospirillum magneticum AMB-1] Length = 302 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 106/259 (40%), Gaps = 6/259 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M L L ++ + L +K+ G + G+ + + + G+ Sbjct: 1 MKPFVLPLFLALAVISTGGAARAEPTLDKVKRTGSVVLGVREASYPLSYLDGDKKPIGYH 60 Query: 61 VDFCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD CR A+ + + +++ + +K R L ID+ +T R+ + Sbjct: 61 VDICRRVTEAVKAQLGLAALEVRTEVVTSKTRIPRLLDGGIDLECGSTTNNAARQTQVA- 119 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F P TY + K I +SQL G ++ AG+T+ L + ++K + Sbjct: 120 -FAPTTYVASVRIAVKKAAHIGKLSQLDGKAVATTAGSTSVQLLKARVQGRDIKVTELFG 178 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E + + A+ D + L L ++ P ++ ILP ++ P+A + +GD E Sbjct: 179 NDHAESFKMLESDQAAAFVMDDNLLAGLIASSAAPKDYQILPQTLNTEPIAIMLRKGDPE 238 Query: 237 WYNIVSWTHYAMVTAEELG 255 + +V T AM+ + E+G Sbjct: 239 FKALVDRTVKAMMESGEVG 257 >gi|300692064|ref|YP_003753059.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein [Ralstonia solanacearum PSI07] gi|299079124|emb|CBJ51791.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein [Ralstonia solanacearum PSI07] Length = 303 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 97/250 (38%), Gaps = 9/250 (3%) Query: 7 VSILCLIILFF---TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++LC + F T+ ++ +L I+ G ++ F+ A+ G+ VD Sbjct: 11 AALLCSSLSIFAPGTALASATPVLDRIRDTGTVRIAHRESAAPFSYYDADKKPIGYAVDL 70 Query: 64 CRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 C + + + K+QY+ + R + + D+ T RE +AF Sbjct: 71 CLRVVDKLRAELKRPDLKVQYVLVTPSTRIPTIMEGKADLECSTTTNN--RERREQVAFT 128 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ GI L ++ + GTT+ + + + + Sbjct: 129 IPHYIAGIRMLVKTSSGIHKWDDLRNKTVVLTKGTTSVTEMRKLNDSRVLHMKIEEVKEH 188 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + + DA+ D LY+ + P ++ ++ D+++ P A + + D E+ Sbjct: 189 AEAFAMVESGKADAFAMDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKSDPEFKR 248 Query: 240 IVSWTHYAMV 249 +V A++ Sbjct: 249 VVDRAMTAII 258 >gi|222529920|ref|YP_002573802.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor bescii DSM 6725] gi|222456767|gb|ACM61029.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor bescii DSM 6725] Length = 266 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 95/251 (37%), Gaps = 14/251 (5%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 MYK V ++ L I F + ++N L IKK G++ N + Sbjct: 1 MYKKVIALVLLIALFIPFLSGCTSNDQNMTTLEKIKKTKEFVVGMDNTFPPMEFTDDNNN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD ++ + +K++ + ++ AL+SK+ D + T R+ + Sbjct: 61 TVGFDVDLANEIAKKLG---AKLKIVAVDWSGIQSALKSKKFDAIISCFSITDERKKAFN 117 Query: 116 LAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 L + Q + K I S L G I VQA TT + + K N + Sbjct: 118 L--AGPYLYIRQVIAVKKGDSSIKSFEDLKGIKIGVQANTTGDNAVQKM-KFINYEKDVT 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +ER+ + R A D + A P + I P + + P+ A+ + D Sbjct: 175 RYERITDAFNDLDIGRIKAVVIDS--VVAYYYKKQNPEKFDIAPAQLEREPVGIALRKED 232 Query: 235 TEWYNIVSWTH 245 + YN + Sbjct: 233 KDLYNEIQKIL 243 >gi|251796879|ref|YP_003011610.1| extracellular solute-binding protein family 3 [Paenibacillus sp. JDR-2] gi|247544505|gb|ACT01524.1| extracellular solute-binding protein family 3 [Paenibacillus sp. JDR-2] Length = 282 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 111/277 (40%), Gaps = 31/277 (11%) Query: 1 MYKDFFVSILCLIILFFTS--------------------FSTNASILGDIKKRGFLKCGI 40 M K ++++ + T+ S +AS L IK RG L G+ Sbjct: 1 MKKKSWMTLGIALTFLATALLAGCSSKEGGDGNGANGESASGSASALESIKNRGKLVVGV 60 Query: 41 NTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 F +G +GFDVD +AL+ I D +KI+ + +K R L + ID+ Sbjct: 61 KYDTKLFGLKDPASGSVEGFDVDIAKALAKEILGDETKIELKEVTSKTRIPMLNNNDIDM 120 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTEL 158 + T R+ + F + + GQ ++ K I S+ + G + G+T+ Sbjct: 121 IVATMTITEERKK--EVDFSDVYFKAGQSLLVKKGSPIKSIDDIKKGTKVLAVKGSTSVD 178 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 + KA + F+ ++ +A +A + D T D + LY + + + + ++ Sbjct: 179 NI----KAKAPDATILEFDNYQDAFSALKAGQGDTLTTDNAILYGMAVQDPN---YEVVG 231 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + P AI +G T+ N V+ + E Sbjct: 232 EPFTDEPYGIAIKKGATDLLNSVNAGLKKLHDNGEYD 268 >gi|188534469|ref|YP_001908266.1| glutamate and aspartate transporter subunit [Erwinia tasmaniensis Et1/99] gi|188029511|emb|CAO97388.1| Glutamate/aspartate periplasmic-binding protein [Erwinia tasmaniensis Et1/99] Length = 309 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 54/270 (20%), Positives = 93/270 (34%), Gaps = 20/270 (7%) Query: 1 MYKDFFVSILCLIILFFTSFST-------------NASILGDIKKRGFLKCGINTGLVGF 47 M L L S L I K G + G V F Sbjct: 1 MKFRKLGLCLALASAASGIAHADDTKVQAVADAQQQNSTLEKIAKTGVIVVGHRESSVPF 60 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRN 103 + G+ D+ A+ +AI +++ LP+ ++ R LQ+ D + Sbjct: 61 SYYDNQQKVVGYSQDYSNAIVAAIKTKLNKPDLQVKMLPVTSQNRIPLLQNGTYDFECGS 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T L R+ +F + G ++ K I + L G ++ V +GTT+E+ L Sbjct: 121 TTNNLERQK--QASFSNSIFVVGTRLLVKKGGAIKDFADLKGKTVVVTSGTTSEILLNKL 178 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 M I + + + R A+ D + L + +PS+ IL S Sbjct: 179 NDEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPSDWEILGTPQSH 238 Query: 224 SPLAPAIIQGDTEWYNIVSWTH-YAMVTAE 252 + +GD E+ ++ T A + E Sbjct: 239 EAYGCMLRKGDNEFKKLMDDTIVQAQTSGE 268 >gi|149926670|ref|ZP_01914930.1| putative ABC transporter, glutamate receptor [Limnobacter sp. MED105] gi|149824599|gb|EDM83815.1| putative ABC transporter, glutamate receptor [Limnobacter sp. MED105] Length = 299 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 93/235 (39%), Gaps = 6/235 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFDDPSKIQY 80 L I + + G V F+ + N G+ +D C A+ + + +Q Sbjct: 28 GTLKKITETKTIVVGYRESSVPFSYLDNNQKPIGYHMDMCNKVVDAVKAKLKMPSLNVQL 87 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P+ + R LQ+ ID+ +T ++ R ++F T+ ++ K GI S+ Sbjct: 88 QPVTSANRIPLLQNGTIDMECGSTTNSVAR--QEQVSFANSTFITSVKIVVKKNSGIKSL 145 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L G I +GTT+ + K N+ + I + E R A+ D Sbjct: 146 ADLDGQPIATTSGTTSVQLIKQNEKGANINFKEIYGKDHAESFLLVANDRAKAFVMDDIL 205 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L + P E + LP+I+ P + + D ++ ++ T M+ + E Sbjct: 206 IAGLVAQSKNPDEFMFLPEILRTEPYGIMLRKDDPQFKALLDETVNGMIKSGEAE 260 >gi|261379487|ref|ZP_05984060.1| CjaA protein [Neisseria subflava NJ9703] gi|284797947|gb|EFC53294.1| CjaA protein [Neisseria subflava NJ9703] Length = 284 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 114/256 (44%), Gaps = 17/256 (6%) Query: 2 YKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 +K S + L S+ A+ + IK++G ++ G+ F V A Sbjct: 7 FKALLASAAIAVGLTACGGGSGDAQSSQSSGAATVASIKEKGVIRIGVFGDKPPFGYVDA 66 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 NG +GFDV+ + L+ + P K++++ A R ++S ++D++ N T R Sbjct: 67 NGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTKTPER-- 124 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + + F G + K K I+ V+QL ++ V GTT + +F ++ + Sbjct: 125 TEAVDFADPYMKVALGVVSPKDKPITDVAQLKDQTLLVNKGTTADA----FFTKNHPEVK 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + F++ E A + R A D + L+A + P+ V + ++ +APA+ + Sbjct: 181 LLKFDQNTETFDALKDGRGVALAHDNALLWAWA--KENPNFEVAIGNLGPAEFIAPAVQK 238 Query: 233 GDTEWYNIVSWTHYAM 248 G+T+ N V+ AM Sbjct: 239 GNTDLLNWVNGEIAAM 254 >gi|292487616|ref|YP_003530488.1| putative glutamate/aspartate ABC transporter periplasmic protein [Erwinia amylovora CFBP1430] gi|292898854|ref|YP_003538223.1| glutamate/aspartate ABC transporter substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291198702|emb|CBJ45811.1| glutamate/aspartate ABC transporter, substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291553035|emb|CBA20080.1| putative glutamate/aspartate ABC transport system, periplasmic component [Erwinia amylovora CFBP1430] Length = 309 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 52/270 (19%), Positives = 100/270 (37%), Gaps = 20/270 (7%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNAS------------ILGDIKKRGFLKCGINTGLVGF 47 M + + + I + + +A L I K G + G V F Sbjct: 1 MKFRKLGLCLALAGIASGIAHAEDAKAPATADAQQQTHTLEKIAKNGVIVVGHRESSVPF 60 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRN 103 + G+ D+ A+ +AI +++ LP+ ++ R LQ+ D + Sbjct: 61 SYYDNQQKVVGYSQDYSDAIVAAIKKKLNKPDLQVKMLPVTSQNRIPLLQNGTYDFECGS 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T + R+ +F + G ++ K I + L G ++ V +GTT+E+ L Sbjct: 121 TTNNIERQK--QASFSNSIFVVGTRLLVKKGSAIKDFADLKGKTVVVTSGTTSEILLNKL 178 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 M + + + + R A+ D + L + +PSE IL S+ Sbjct: 179 NDEQKMGMRIVSAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPSEWEILGTPQSR 238 Query: 224 SPLAPAIIQGDTEWYNIVSWTH-YAMVTAE 252 + +GD+E+ ++ T A + E Sbjct: 239 EAYGCMLRKGDSEFKKLMDDTIVQAQTSGE 268 >gi|300823028|ref|ZP_07103162.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 119-7] gi|300920529|ref|ZP_07136955.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 115-1] gi|331676315|ref|ZP_08377027.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli H591] gi|300412468|gb|EFJ95778.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 115-1] gi|300524377|gb|EFK45446.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 119-7] gi|331076373|gb|EGI47655.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli H591] Length = 327 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 88/241 (36%), Gaps = 6/241 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---- 74 + S L I K G + G V F+ G+ D+ A+ A+ Sbjct: 50 AAPVAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 109 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +++ +P+ ++ R LQ+ D +T + R+ F + G + K Sbjct: 110 DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKG 167 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + L G ++ V +GTT+E+ L + M I + + + R A+ Sbjct: 168 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 227 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 228 MMDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEA 287 Query: 255 G 255 Sbjct: 288 E 288 >gi|301155146|emb|CBW14610.1| unnamed protein product [Haemophilus parainfluenzae T3T1] Length = 285 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 109/259 (42%), Gaps = 21/259 (8%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNA-----------SILGDIKKRGFLKCGINTGLVGF 47 M K F ++ L F + N S L I+K G ++ G+ + F Sbjct: 1 MKKTFKTLTALFATATLAFGLTACNDKEPAKDGAKTVSSLEQIQKDGKVRIGVFSDKPPF 60 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 V A G +GFDV+ +A+ + D +K++++ ++A R L SK++DI+ N T Sbjct: 61 GYVDAQGKSQGFDVEIGKAIGKDLLGDENKVEFVLVDAANRAEYLLSKKVDIILANFTVT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ + F G + I+ + QL G ++ V GTT ++ +F + Sbjct: 121 PARKEV--VDFANPYMKVALGVVSKDGSVITDLEQLKGKTLIVDKGTTADI----FFTKN 174 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + FE+ E A R R DA + D + L+A P V + + + +A Sbjct: 175 YPDVKLLKFEQNTETFEALRDGRGDALSNDNTFLFAWAKQ--NPGYTVGVKNFGDQDVIA 232 Query: 228 PAIIQGDTEWYNIVSWTHY 246 PA+ + E N ++ Sbjct: 233 PAVRKDAPELLNWLNNEIQ 251 >gi|171315678|ref|ZP_02904912.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171099210|gb|EDT43983.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 298 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 87/251 (34%), Gaps = 8/251 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F + L ++ A L IK G + GI V F+ G Sbjct: 1 MDRRFRWLAVALTCALASTAHAQALTGTLKKIKDTGIVSLGIRESSVPFSYSDNQQKNIG 60 Query: 59 FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D AL + + ++ +P+ ++ R LQ+ ID +T TL R+ Sbjct: 61 YSRDIAARIIDALKAELKAPNLTVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + G F K G+ + L+G ++ AGT+ E L + M I Sbjct: 121 A--FSNSIFLYGIRFSTRKDSGVKDFTDLAGKTVATTAGTSDERLLRKLNEEKGMNMTII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D LY + P + + + A + + D Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVAGTPLVHENYACMMRKDD 238 Query: 235 TEWYNIVSWTH 245 + ++V Sbjct: 239 PAFKHVVDGVI 249 >gi|145298525|ref|YP_001141366.1| ABC-type amino acid transporter, periplasmic binding protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142851297|gb|ABO89618.1| ABC-type amino acid transporter, periplasmic binding protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 260 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 56/249 (22%), Positives = 92/249 (36%), Gaps = 17/249 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +S L L L + + AS L + RG L+ G + G F G + GFD Sbjct: 1 MIKKLILSTLLLCGL--ANAAAPASTLDAVLDRGVLRVGFDAGYQPFEMTNKQGQYIGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + ++++ AL + + D++ T R +L + F Sbjct: 59 VDLAKMVAKEMGVK---VEFVNTAWDGIIPALLTDKFDVIMGGMTVTPQR--NLRVNFAD 113 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K I S S L+ V+ GTT E + + F Sbjct: 114 PYIVVGQTIVLRKDKAGEIKSFSDLNDPKYKIAVKLGTTGEQAVKRLIPKA----TLLQF 169 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E ++ + DA+ D+ N H L + PLA AI +GD + Sbjct: 170 ETQDDAKLEVINGKVDAFVYDLPYNAIFASQNTGAVVH--LDKPFTFEPLAWAIRKGDQD 227 Query: 237 WYNIVSWTH 245 N + Sbjct: 228 TLNWFNNYL 236 >gi|309780275|ref|ZP_07675026.1| glutamate/aspartate periplasmic-binding protein [Ralstonia sp. 5_7_47FAA] gi|308920978|gb|EFP66624.1| glutamate/aspartate periplasmic-binding protein [Ralstonia sp. 5_7_47FAA] Length = 301 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 92/256 (35%), Gaps = 6/256 (2%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F L ++ L I+ + G+ + F+ + + GF D Sbjct: 9 RTFPLALASLLAIGAHAQALDGTLKKIQDSNTILIGVRESSIPFSYRDSKNEIVGFSADL 68 Query: 64 C----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 C A+ I+++P+ ++ R +Q+ +D+ T RE AF Sbjct: 69 CSRVIDAVKKKTGKPNLDIKHIPVTSQNRTSLVQNGSVDLECGVTTHLKSRE--QQTAFS 126 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + + K G+ L+G S+ AGTT+E L M + I + Sbjct: 127 TTFFIAGTRLLTNVKSGVKDFPDLAGKSVITNAGTTSERILRRMNDEKKMNMNVISGKDY 186 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E ++ R A+ D L + +P + V+ S + + D ++ Sbjct: 187 GESFLTLQSGRVAAFMMDDVLLAGARTLAQKPDDWVVTGTPQSFEAYGFMLRRDDPQFKK 246 Query: 240 IVSWTHYAMVTAEELG 255 +V T ++ + E+ Sbjct: 247 LVDDTMTGVMKSGEIK 262 >gi|66047135|ref|YP_236976.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae B728a] gi|63257842|gb|AAY38938.1| extracellular solute-binding protein, family 3 [Pseudomonas syringae pv. syringae B728a] Length = 333 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 89/258 (34%), Gaps = 8/258 (3%) Query: 4 DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDV 61 + + ++ F+ L IK+ G + G + F+ + A+G G+ Sbjct: 35 HLLGAAITAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPVGYSH 94 Query: 62 DFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D + AI D K++Y + ++ R +Q+ +D+ +T + R + Sbjct: 95 DIQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVD 152 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + G + K L G ++ AGTT+E L M + I + Sbjct: 153 FSIGIFEVGTRLLSKKNSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAK 212 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R A+ D + L +P + + S + +GD + Sbjct: 213 DHGESFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPF 272 Query: 238 YNIVSWTHYAMVTAEELG 255 V A + E+ Sbjct: 273 KKAVDDAIVATYKSGEIN 290 >gi|157160143|ref|YP_001457461.1| glutamate and aspartate transporter subunit [Escherichia coli HS] gi|260853906|ref|YP_003227797.1| periplasmic-binding component GltI [Escherichia coli O26:H11 str. 11368] gi|312970730|ref|ZP_07784911.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli 1827-70] gi|331667009|ref|ZP_08367883.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA271] gi|157065823|gb|ABV05078.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli HS] gi|257752555|dbj|BAI24057.1| periplasmic-binding component GltI [Escherichia coli O26:H11 str. 11368] gi|310337379|gb|EFQ02517.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli 1827-70] gi|320198220|gb|EFW72824.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli EC4100B] gi|323153620|gb|EFZ39868.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli EPECa14] gi|331066233|gb|EGI38117.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA271] Length = 302 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 88/241 (36%), Gaps = 6/241 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---- 74 + S L I K G + G V F+ G+ D+ A+ A+ Sbjct: 25 AAPVAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 84 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +++ +P+ ++ R LQ+ D +T + R+ F + G + K Sbjct: 85 DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKG 142 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + L G ++ V +GTT+E+ L + M I + + + R A+ Sbjct: 143 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 202 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 203 MMDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEA 262 Query: 255 G 255 Sbjct: 263 E 263 >gi|193069104|ref|ZP_03050062.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli E110019] gi|218694095|ref|YP_002401762.1| glutamate and aspartate transporter subunit [Escherichia coli 55989] gi|192957648|gb|EDV88093.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli E110019] gi|218350827|emb|CAU96521.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|324116729|gb|EGC10644.1| extracellular solute-binding protein 3 [Escherichia coli E1167] Length = 302 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 88/241 (36%), Gaps = 6/241 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---- 74 + S L I K G + G V F+ G+ D+ A+ A+ Sbjct: 25 AAPVAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 84 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +++ +P+ ++ R LQ+ D +T + R+ F + G + K Sbjct: 85 DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKG 142 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + L G ++ V +GTT+E+ L + M I + + + R A+ Sbjct: 143 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 202 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 203 MMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEA 262 Query: 255 G 255 Sbjct: 263 E 263 >gi|311280448|ref|YP_003942679.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] gi|308749643|gb|ADO49395.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] Length = 303 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 93/265 (35%), Gaps = 15/265 (5%) Query: 4 DFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 ++++ ++ + S L I K G + G V F+ Sbjct: 2 QLRKLAAAMLVMGMSAGLAHADDAAPAAGQSTLDKIAKNGVIVVGHRESSVPFSYYDNQQ 61 Query: 55 DWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G+ D+ A+ A+ +I+ LP+ ++ R LQ+ D +T L R Sbjct: 62 KVVGYSQDYSNAIVEAVKKKLNKPDLQIKLLPVTSQNRIPLLQNGTFDFECGSTTNNLER 121 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 +F + G ++ K I L ++ V +GTT+E+ L M Sbjct: 122 --QQQASFSDTIFVIGTRLLVKKGSPIKDFPDLKDKTVVVTSGTTSEVLLHKLNDEKQMN 179 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 I + + + R A+ D + L + +P + VI+ SK + Sbjct: 180 MRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDDWVIVGTPQSKEAYGCML 239 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELG 255 + D E+ ++ T T+ E Sbjct: 240 RKNDPEFKKLMDDTISQAQTSGEAE 264 >gi|115350618|ref|YP_772457.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115280606|gb|ABI86123.1| L-aspartate-binding protein / L-glutamate-binding protein [Burkholderia ambifaria AMMD] Length = 297 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 94/258 (36%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + L + + L IK G + G + F+ N G+ Sbjct: 1 MKYHKAVLMVAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60 Query: 60 DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +F + A+ +++ +P+ ++ R +Q+ +DI +T R Sbjct: 61 SREFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTER--QQQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 AF + G + K G+ + L G ++ AGTT+E L + + I Sbjct: 119 AAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R A+ D + L + +P E VI+ S+ + +GDT Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDT 238 Query: 236 EWYNIVSWTHYAMVTAEE 253 ++ +V + + E Sbjct: 239 DFKKVVDDAISQVEKSGE 256 >gi|242309235|ref|ZP_04808390.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter pullorum MIT 98-5489] gi|239524276|gb|EEQ64142.1| amino-acid ABC transporter periplasmic solute-binding protein [Helicobacter pullorum MIT 98-5489] Length = 273 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 107/254 (42%), Gaps = 13/254 (5%) Query: 1 MYKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K F+ L ++ L+F + + L IK++G + G+ + F + +G Sbjct: 1 MRKILFIMFLGILSLWFVGCGQTQTNSNNTLEAIKQKGVVTIGVFSDKPPFGFINKDGKN 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDV + ++ + D +K+++ + A R L+S ++DI+ N T RE + Sbjct: 61 DGFDVYLSKQIAKDLLGDENKVKFELVEAASRVEFLKSGKVDIIMANFTKTPEREAV--V 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G + K I ++ L G + V GTT + F ++ + + + Sbjct: 119 DFAAPYMKVALGVVS-KNGEIKTIEDLKGKKLIVNKGTTADFY----FSKNHPEIELLKY 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ E A + R A D ++A + P V + + ++ +APA+ +GD E Sbjct: 174 DQNTESFLALKDGRGVALAHDNLLVFAWA--KENPGFEVGITKMGNEDVIAPAVKKGDKE 231 Query: 237 WYNIVSWTHYAMVT 250 ++ + Sbjct: 232 LLEWLNQEIQTLTE 245 >gi|302876277|ref|YP_003844910.1| extracellular solute-binding protein family 3 [Clostridium cellulovorans 743B] gi|307687009|ref|ZP_07629455.1| extracellular solute-binding protein family 3 [Clostridium cellulovorans 743B] gi|302579134|gb|ADL53146.1| extracellular solute-binding protein family 3 [Clostridium cellulovorans 743B] Length = 282 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 58/253 (22%), Positives = 105/253 (41%), Gaps = 15/253 (5%) Query: 1 MYKDF-----FVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K F +++ I + S + S + IKK G +K G+ + F V Sbjct: 1 MKKRFKVASILTTLVIAIGVLAGCSSKTSKESSIETIKKNGVIKIGVFSDKPPFGYVDEK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ +GFDV R + + D SK+Q++ + A R L++ ++D++ N T R+ Sbjct: 61 GNNQGFDVYIARRFAKDLLGDESKVQFVLVEAASRVEYLETGKVDVILANFTVTDERKE- 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F G + + I++V QL G + V GTT E F + Sbjct: 120 -KVDFANPYMKVALGVVSPEGDKITNVDQLKGKKLIVNKGTTAETY----FTKNYPNIEL 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + +++ E A + R A D + L+A + + + S +APA+ +G Sbjct: 175 LKYDQNTEAFQALKDGRGSALAHDNTLLFAWA--RENKGFTTGVESLGSLDTIAPAVQKG 232 Query: 234 DTEWYNIVSWTHY 246 + E N ++ Sbjct: 233 NVELLNWINDELT 245 >gi|17544803|ref|NP_518205.1| amino-acid-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17427092|emb|CAD13612.1| probable amino-acid-binding periplasmic (pbp) abc transporter protein [Ralstonia solanacearum GMI1000] Length = 301 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 89/253 (35%), Gaps = 8/253 (3%) Query: 7 VSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 +++ I A L I+ + G+ + F+ + GF D C Sbjct: 10 LALAGAIAASVLPAQAEALDGTLKKIQDSNTILIGVRESSIPFSYRDSKNQIIGFSADLC 69 Query: 65 ----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 A+ + ++Q +P+ ++ R +Q+ +D+ T RE AF Sbjct: 70 SRVIDAVKQKVGKPDLQVQQIPVTSQNRTALVQNGSVDLECGVTTHLKSRE--QQTAFST 127 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + G+ L+G S+ AGTT+E L M + I + Sbjct: 128 TFFIAATRLLTSTHSGVKDFPDLAGKSVITNAGTTSERILRKMNDEKKMNMNVISGKDYG 187 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E ++ R A+ D L + +P++ V+ S + + D ++ + Sbjct: 188 ESFLTLQSGRVQAFMMDDVLLAGARTLAQKPADWVVTGTPQSFEAYGFMLRKDDPQFKKL 247 Query: 241 VSWTHYAMVTAEE 253 V T ++ E Sbjct: 248 VDDTLTGVMKRGE 260 >gi|134294747|ref|YP_001118482.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134137904|gb|ABO53647.1| L-aspartate-binding protein / L-glutamate-binding protein [Burkholderia vietnamiensis G4] Length = 297 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 94/258 (36%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + I L + + L IK G + G + F+ N G+ Sbjct: 1 MKYQKAVLMIAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60 Query: 60 DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 DF + A+ +++ +P+ ++ R +Q+ +DI +T L R Sbjct: 61 SRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLER--QQQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 AF + G + K G+ + L G ++ AGTT+E L + I Sbjct: 119 AAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMSIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R A+ D + L + +P E VI+ S+ + +GD Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDA 238 Query: 236 EWYNIVSWTHYAMVTAEE 253 ++ +V + + E Sbjct: 239 DFKKVVDEAISQVEKSGE 256 >gi|257092714|ref|YP_003166355.1| family 3 extracellular solute-binding protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045238|gb|ACV34426.1| extracellular solute-binding protein family 3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 301 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 93/264 (35%), Gaps = 11/264 (4%) Query: 1 MYK---DFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M+K F ++ L + L IK G + G + F+ Sbjct: 1 MFKVSRRFAIAATLSAALLSAPVAAQELTGTLKKIKDTGVITLGHRESSIPFSYYDDKQQ 60 Query: 56 WKGFDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G+ + A+ + + ++ +P+ + R +Q+ +D+ +T R+ Sbjct: 61 VIGYSHEMMLKAVEAIKADLKLAKLDVKLMPVTSANRITLVQNGSVDLECGSTTNNTERQ 120 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 ++F + G + GI+ L+G ++ AGTT+E L + MK Sbjct: 121 K--QVSFSNSIFIIGTRLMTKTNSGINDFPDLAGKNVVTTAGTTSERLLRKMNEDKQMKM 178 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + I + E R A+ D + LY + S+ V++ S + Sbjct: 179 NVISAKDHGESFLTLETGRAVAFMMDDALLYGEMAKAKKASDWVVVGTPQSYEAYGCMLR 238 Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255 + D + +V +T+ E Sbjct: 239 KDDPAFKKVVDGALAKAMTSGEAE 262 >gi|171060694|ref|YP_001793043.1| extracellular solute-binding protein [Leptothrix cholodnii SP-6] gi|170778139|gb|ACB36278.1| extracellular solute-binding protein family 3 [Leptothrix cholodnii SP-6] Length = 298 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 109/259 (42%), Gaps = 9/259 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V ++ + + L IK + G+ + +G + G+ Sbjct: 1 MKKTLLVF---AALMAMGAAQAQSDTLKKIKDSASVTMGVRESSGALSLTLGDGKYVGYH 57 Query: 61 VDFC-RALS---SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 V+ C RAL+ + I+Y + ++ R +Q+ +DI +T R+ + Sbjct: 58 VELCQRALADVQKLLGLPKLDIKYQAVTSQNRIPLVQNGTVDIECGSTTNNAARQK--DV 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 +F TY + + GI+S++QL G S+ GTT+ L + +A+ + ++ + Sbjct: 116 SFAVTTYVEEVRIAVKGSSGITSIAQLGGKSVATTTGTTSVQLLRKHERANGVNFNEVFG 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R DA+ D L + P++ I+ +++S P+A + + D Sbjct: 176 KDHADSFLLLESGRADAFVMDGQILAGNIAKSKAPADFKIVGEVLSVEPIAIMMRKDDPA 235 Query: 237 WYNIVSWTHYAMVTAEELG 255 + + + AM+ + E+ Sbjct: 236 FKKAIDASLTAMMKSGEIA 254 >gi|320178445|gb|EFW53413.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Shigella boydii ATCC 9905] Length = 302 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 88/241 (36%), Gaps = 6/241 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---- 74 + S L I K G + G V F+ G+ D+ A+ A+ Sbjct: 25 AAPVAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 84 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +++ +P+ ++ R LQ+ D +T + R+ F + G + K Sbjct: 85 DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQTQAA--FSDTIFVVGTRLLTKKG 142 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + L G ++ V +GTT+E+ L + M I + + + R A+ Sbjct: 143 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 202 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L + +P I+ S+ + + D ++ ++ T M T+ E Sbjct: 203 MMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQMQTSGEA 262 Query: 255 G 255 Sbjct: 263 E 263 >gi|303253108|ref|ZP_07339257.1| putative ABC transporter, periplasmic binding protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302647790|gb|EFL77997.1| putative ABC transporter, periplasmic binding protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] Length = 278 Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 109/256 (42%), Gaps = 19/256 (7%) Query: 1 MY-----KDFFVSILCLIILFFT--SFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49 M K + + L + + +S + IK++G ++ G+ F Sbjct: 1 MKLSTTLKTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGY 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V ANG +GFDV+ + +++ + P K++++ A R L+S ++D++ N T Sbjct: 61 VDANGKSQGFDVEIAKEIANDLLGSPDKMEFVLTEAANRVEYLKSNKVDLILANFTKTPE 120 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R + F G + K I+ + QL G ++ V GTT + F ++ Sbjct: 121 RAEV--VDFAAPYMNVALGVVSPKGALITDLKQLEGKTLLVNKGTTADAY----FTKNHP 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + + F++ E A + R A D + ++A + P+ V + + +APA Sbjct: 175 EINLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGPAEQIAPA 232 Query: 230 IIQGDTEWYNIVSWTH 245 + +G+ ++++ Sbjct: 233 VQKGNQALLDVINKKI 248 >gi|157146734|ref|YP_001454053.1| glutamate and aspartate transporter subunit [Citrobacter koseri ATCC BAA-895] gi|157083939|gb|ABV13617.1| hypothetical protein CKO_02507 [Citrobacter koseri ATCC BAA-895] Length = 317 Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 95/262 (36%), Gaps = 11/262 (4%) Query: 3 KDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + + S L I K G + G V F+ Sbjct: 19 RKLATAMLVMGMSAGLAHAEDAAPAAGSTLDKIAKNGIIVVGHRESSVPFSYYDNQQKVV 78 Query: 58 GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +++ +P+ ++ R LQ+ D +T + R+ Sbjct: 79 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQ 138 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + G + K I L G ++ V +GTT+E+ L + M Sbjct: 139 AA--FSDTIFIVGTRLLAKKDSDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMNMRI 196 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 197 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKN 256 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 D E+ +V T + T+ E Sbjct: 257 DPEFKTLVDDTIAQVQTSGEAE 278 >gi|258405418|ref|YP_003198160.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] gi|257797645|gb|ACV68582.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] Length = 263 Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 81/251 (32%), Gaps = 11/251 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + + ++K+G L G++ K +G GFD Sbjct: 1 MKKAILFVSALLCLCVAATGFAGDGSWERVQKKGELVIGLDDTFAPMGFRKDDGTLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + D I + P +L +K+ D + T R + F Sbjct: 61 VDAAEALGERLGID---IAWQPTAWDGVIHSLNAKKFDCIWNGMTITEERAA--KVDFTE 115 Query: 121 ITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 D + + ++ + L G ++ VQ G++ + D KA + Sbjct: 116 PYIMDGQIVVVQFENDAVTDFADLGGTTVGVQKGSSAVEAVEDLPKA---PETVKEYPSN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R A D + RP +LP ++K P A + D Sbjct: 173 NNALLDLEAGRLAAVIVDN--VAGRYAIATRPGTFKVLPGFVTKEPFGIAFRKADDSLRM 230 Query: 240 IVSWTHYAMVT 250 V AMV Sbjct: 231 KVQQALDAMVE 241 >gi|161525883|ref|YP_001580895.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189349395|ref|YP_001945023.1| polar amino acid transporter substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221202318|ref|ZP_03575352.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2M] gi|221209132|ref|ZP_03582126.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2] gi|160343312|gb|ABX16398.1| extracellular solute-binding protein family 3 [Burkholderia multivorans ATCC 17616] gi|189333417|dbj|BAG42487.1| polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221171036|gb|EEE03489.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2] gi|221177892|gb|EEE10305.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2M] Length = 297 Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 92/258 (35%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + L + + L IK G + G + F+ N G+ Sbjct: 1 MKYHKAVLMVAALCAFASGAQAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60 Query: 60 DVD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + A+ + +++ +P+ ++ R +Q+ +DI +T R Sbjct: 61 SREFQLKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNAER--QQQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 AF + G + K G+ + L G ++ AGTT+E L M + I Sbjct: 119 AAFSNTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQMGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R A+ D + L + +P E VI+ S+ + +GD Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDP 238 Query: 236 EWYNIVSWTHYAMVTAEE 253 E+ +V + + E Sbjct: 239 EFKKVVDDAIAQVEKSGE 256 >gi|290476187|ref|YP_003469087.1| glutamate/aspartate ABC transporter periplasmic binding protein [Xenorhabdus bovienii SS-2004] gi|289175520|emb|CBJ82323.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) [Xenorhabdus bovienii SS-2004] Length = 295 Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 95/259 (36%), Gaps = 7/259 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L L + L IK G + G V F+ + G+ Sbjct: 1 MRKLMLTMML-LSAVGAAHAEELTGTLKKIKDNGIIVVGHRESSVPFSYYDNQQNVVGYA 59 Query: 61 VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 D+ + A+ +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 60 QDYSNLIVDAVKKKLDMPNLQVKLIPITSQNRIPLLQNGTYDFECGSTTNNLERQKQAA- 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G + +K GI L+G + V +GTT+E+ L M+ I Sbjct: 119 -FSNTIFVVGTRLLTNKDSGIKGFDDLAGKHVVVTSGTTSEILLNKLNDEKQMQMRIISA 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D + L + +P + VI+ S+ + + D + Sbjct: 178 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDQWVIVGKPQSEEAYGCMLRKDDPQ 237 Query: 237 WYNIVSWTHYAMVTAEELG 255 + ++ T + T+ E Sbjct: 238 FKKLIDGTIVKVQTSGEAE 256 >gi|222099043|ref|YP_002533611.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Thermotoga neapolitana DSM 4359] gi|221571433|gb|ACM22245.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Thermotoga neapolitana DSM 4359] Length = 246 Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 103/247 (41%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + V +L + ++ F+ + +IK RG+L G++ F V NG+ GFD Sbjct: 1 MRRLIAVLVLAISMVAFSGA------IEEIKSRGYLLVGLSADFPPFEFVDENGNIVGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + + ++ + + +L +K+ID++ T R+ + F Sbjct: 55 VDLAKEIARRLGVE---LKIVDMTFDGLIPSLLTKKIDVIISGMTITEERKKVVA--FSD 109 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + GQ ++ K + L G ++ VQ GTT ++ ++ Y + + F++ Sbjct: 110 PYFDAGQVIVVRKDSDFRPKTYEDLVGKTVAVQIGTTGDIEVSKY-----EGINVVRFDK 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R DA D + + + VI D++S A+ + DT+ Sbjct: 165 FTDAFLELKRKRADAVVLD---SATARAFVSKNPDIVISSDVLSSEQYGIAVRKEDTDLL 221 Query: 239 NIVSWTH 245 ++ Sbjct: 222 EFINGVL 228 >gi|311107045|ref|YP_003979898.1| glutamate/aspartate periplasmic-binding protein 2 [Achromobacter xylosoxidans A8] gi|310761734|gb|ADP17183.1| glutamate/aspartate periplasmic-binding protein 2 [Achromobacter xylosoxidans A8] Length = 302 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 96/261 (36%), Gaps = 8/261 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M S+ L I + S L + G + G + F+ N G Sbjct: 1 MALRIKASVAALAIFMAGAASAQQLDGTLKKVADTGTITIGHRETSIPFSYYDGNQKPVG 60 Query: 59 FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + +D C RA+ + + +++YLP+ + R + + ID+ +T TL + Sbjct: 61 YSIDICERIVRAVQTRLKRSDIQVKYLPVTSATRIPLMGNGTIDLECASTSNTL--DRQQ 118 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 +AF T+ G F+ K + +V L G + +GT + + + + + Sbjct: 119 QVAFSVTTFVTGNRFLSQKSSKLRTVDDLKGKVVASTSGTANIRQINELNETRGLGMRIV 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D LY L +P + + +S P A + + D Sbjct: 179 PVKEHAEGFLMVETGRAAAFVMDDILLYGLIANAKQPDRYEVSDASLSIEPYAIMLRRDD 238 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 ++ +V A+ + E Sbjct: 239 PQFKALVDDAIKALYASGEFQ 259 >gi|319761413|ref|YP_004125350.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|317115974|gb|ADU98462.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] Length = 299 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 101/253 (39%), Gaps = 7/253 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + ++ ++ + L IK G + G+ A +G + GF Sbjct: 1 MKKHLLAAAITVLA-AGSAIAQANDTLAKIKSSGAITLGVRESSGALAYTLGDGKYVGFH 59 Query: 61 VDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + ++ + +I+Y P+ ++ R + + +D+ +T L R+ + Sbjct: 60 TEMAERVARDLQKKLGLSKLEIKYQPVTSQNRIPLVVNGTVDLECGSTTNNLARQKDVA- 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F TY + + GIS + L+G +I GTT+ TL +A M + ++ Sbjct: 119 -FANTTYVEEVRIAVKANSGISDIKDLNGKTIVTTTGTTSVQTLRKNKRAEGMNFREVMG 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R DA+ D S L + P++ I+ + +S P+A + + D Sbjct: 178 KDHADSFLMLETGRADAFIMDGSILAGNISKSKNPNDFKIVGEALSVEPIACMLRKDDPA 237 Query: 237 WYNIVSWTHYAMV 249 + V + A + Sbjct: 238 FKKAVDESIVAQI 250 >gi|182419546|ref|ZP_02950794.1| glutamine-binding protein [Clostridium butyricum 5521] gi|237668292|ref|ZP_04528276.1| glutamine-binding protein (GlnBP) [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376581|gb|EDT74156.1| glutamine-binding protein [Clostridium butyricum 5521] gi|237656640|gb|EEP54196.1| glutamine-binding protein (GlnBP) [Clostridium butyricum E4 str. BoNT E BL5262] Length = 279 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 103/277 (37%), Gaps = 29/277 (10%) Query: 1 MY-KDFFVSILCLIILFFTSF--------------------STNASILGDIKKRGFLKCG 39 M K ++ + T S + + IK G LK G Sbjct: 1 MKLKRLIIAFGLGACILMTGCGSSSSTSQSQGTDTSSKASSSAEGADIQKIKDNGVLKVG 60 Query: 40 INTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98 + + F + G+ +GF+VD + ++ I D +KI+ + AK R L + +ID Sbjct: 61 VKVDVPKFGYKNPDTGEIEGFEVDLSKQIAKKILGDENKIELQGVTAKTRGPLLDNGEID 120 Query: 99 ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158 +++ T R+ F DG G ++ K G +S+ L+G +I V +TT+ Sbjct: 121 MVAATFTITDERKK--SYNFSDPYLTDGVGLLVKKDAGYTSLKDLNGKTIGVAQSSTTKK 178 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 L + + F EI AA + R D + D S L VIL Sbjct: 179 ALEEEAANQGISLKFSEFGSYPEIKAALDSKRVDCFAVDASILNGYV-----DDNSVILD 233 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + A + E +++ M T+ E+ Sbjct: 234 DRYNPQEYGIASKLDNKELAKVINEVVNDMKTSGEMD 270 >gi|330837353|ref|YP_004411994.1| amino acid ABC transporter substrate-binding protein, PAAT family [Spirochaeta coccoides DSM 17374] gi|329749256|gb|AEC02612.1| amino acid ABC transporter substrate-binding protein, PAAT family [Spirochaeta coccoides DSM 17374] Length = 269 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 64/265 (24%), Positives = 107/265 (40%), Gaps = 18/265 (6%) Query: 1 MYKDFFVSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGFAEV 50 M K ++ L+ + S S ++ + IK RG L G+ + GF Sbjct: 1 MKKKCISGLVMLLCVMLVSTSVLFAAGSKESGASNEVDKIKSRGVLNVGVKVDVPGFGYK 60 Query: 51 K-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 + G GF+ D R ++ I D SK+ + P+ AK R L + ++DI+ T Sbjct: 61 DISTGANVGFETDLARQIAKVILGDASKVSFTPVTAKTRGPLLDTGELDIVIATFTVTEE 120 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ L F I Y D ++ K G S+ L G +I V TT+ L K + Sbjct: 121 RK--LSYEFSTIYYTDAVSLLVKKSGGYKSLKDLDGKTIGVAQSATTKAVLETEAKNQGI 178 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + E+ A + R D+++ D + L + ILPD S A Sbjct: 179 TLKFSEYASYPELKVALDSGRIDSFSVDRAILMGYVEDSS-----EILPDKYSPQEYGAA 233 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEEL 254 + +G+ ++V+ T + + EL Sbjct: 234 MKKGNLALLSVVNSTIADLDASGEL 258 >gi|170700094|ref|ZP_02891116.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170135008|gb|EDT03314.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 298 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 86/251 (34%), Gaps = 8/251 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F + L + A L IK G + GI V F+ G Sbjct: 1 MDRRFRWLAVALTCALAGTAHAQALTGTLKKIKDTGIVSLGIRESSVPFSYSDNQQKNIG 60 Query: 59 FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D AL + + ++ +P+ ++ R LQ+ ID +T TL R+ Sbjct: 61 YSRDIAARIIDALKAELKAPNLTVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + G F K G+ + L+G ++ AGT+ E L + M I Sbjct: 121 A--FSNSIFLYGIRFSTRKDSGVKDFTDLAGKTVATTAGTSDERLLRKLNEEKGMNMTII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D LY + P + + + A + + D Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVAGTPLVHENYACMMRKDD 238 Query: 235 TEWYNIVSWTH 245 + ++V Sbjct: 239 PAFKHVVDGVI 249 >gi|257125151|ref|YP_003163265.1| extracellular solute-binding protein family 3 [Leptotrichia buccalis C-1013-b] gi|257049090|gb|ACV38274.1| extracellular solute-binding protein family 3 [Leptotrichia buccalis C-1013-b] Length = 282 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 106/259 (40%), Gaps = 18/259 (6%) Query: 1 MYKDF-----FVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEV 50 M K+F ++IL L + + S + IKK G ++ G+ F V Sbjct: 1 MKKNFERLVKIIAILVLGVFAISCGKGGKGSAEPGSIEAIKKAGKIRIGVFGDKPPFGFV 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 NG +G+D+ + L+ + D +KI+++ L A R L S ++DI+ N T R Sbjct: 61 DENGKNQGYDIYLAKRLAKDLLGDENKIEFVTLEAANRVEYLLSNKVDIILANFTVTDER 120 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + F G + + I V +L G + V GTT E+ F + Sbjct: 121 --KQKVDFAKPYMKVSLGIVSPEGAPIKDVKELKGKKLIVNKGTTAEIY----FTKNYPD 174 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + +++ E A R A D + ++A + P V + + + +APA+ Sbjct: 175 IELLKYDQNTETFNALLDKRGAALAHDNTLVFAWAT--ENPGFVVDIKQLGEQDYIAPAV 232 Query: 231 IQGDTEWYNIVSWTHYAMV 249 +G+ E + ++ A+ Sbjct: 233 RKGNKELLDWLNTEIDALT 251 >gi|312127064|ref|YP_003991938.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor hydrothermalis 108] gi|311777083|gb|ADQ06569.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor hydrothermalis 108] Length = 266 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 96/251 (38%), Gaps = 14/251 (5%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 MYK V ++ L I F + S+N + L IKK G++ N + Sbjct: 1 MYKKAIALVLLIALFIPFLSGCSSNEKNMTTLEKIKKTKEFVVGMDNTFPPMEFTDDNNN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD ++ + +K++ + ++ AL+SK+ D + T R+ + Sbjct: 61 TVGFDVDLANEIAKKLG---AKLKIVAVDWSGIQSALKSKKFDAIISCFSITDERKKAFN 117 Query: 116 LAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 L + Q + K I S L G I VQA TT + + K N + Sbjct: 118 L--AGPYLYIRQVIAVKKGDNSIKSFEDLKGIKIGVQANTTGDSAVQKM-KFINYEKDVT 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +ER+ + R A D + A P + I P + + P+ A+ + D Sbjct: 175 RYERITDAFNDLDIGRIKAVVIDS--VVAYYYKKQNPEKFDIAPAQLEREPVGIALRKED 232 Query: 235 TEWYNIVSWTH 245 + YN + Sbjct: 233 KDLYNEIQKIL 243 >gi|4588485|gb|AAD26123.1| antigenic protein [Actinobacillus pleuropneumoniae] Length = 278 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 109/254 (42%), Gaps = 19/254 (7%) Query: 1 MY-----KDFFVSILCLIILFFT--SFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49 M K + + L + + +S + IK++G ++ G+ F Sbjct: 1 MKLSTTLKTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGY 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V ANG +GFDV+ + +++ + K++++ A R L+S ++D++ N T Sbjct: 61 VDANGKSQGFDVEIAKEIANDLLGSSDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPE 120 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R + F G + K + IS + QL G ++ V GTT + F ++ Sbjct: 121 RAEV--VDFAAPYMNVALGVVSPKVRLISDLKQLEGKTLLVNKGTTADAY----FTKNHP 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + + F++ E A + R A D + ++A + P+ V + + +APA Sbjct: 175 EINLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGPAEQIAPA 232 Query: 230 IIQGDTEWYNIVSW 243 + +G+ ++++ Sbjct: 233 VQKGNQALLDVINK 246 >gi|17545692|ref|NP_519094.1| amino-acid-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17427986|emb|CAD14675.1| probable amino-acid-binding periplasmic (pbp) abc transporter protein [Ralstonia solanacearum GMI1000] Length = 303 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 97/250 (38%), Gaps = 9/250 (3%) Query: 7 VSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++LC + F+ + AS L I+ G ++ F+ A+ G+ VD Sbjct: 11 AALLCTSLSIFSPGTALASTTPVLDRIRDTGIVRIAHRESASPFSYYDADKKPVGYAVDL 70 Query: 64 CRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 C + + + K+QY+ + R +Q + D+ T RE +AF Sbjct: 71 CLRVVDKLRTELKRPDLKVQYVLVTPSTRIPTIQEGKADLECSTTTNN--RERREQVAFT 128 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ GI L ++ GTT+ L + ++ + Sbjct: 129 IPHYIAGIRMLVKTASGIHRWDDLRDKTVVSTKGTTSVAELRKMNDSRVLRIKFEEVKEH 188 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + + DA+ D LY+ + P ++ ++ D+++ P A + + D ++ Sbjct: 189 AEAFAMVESGKADAFVMDDVQLYSFRANAKHPQDYTVVGDMMTVEPYAIMLSKSDPDFKR 248 Query: 240 IVSWTHYAMV 249 +V A++ Sbjct: 249 MVDRAMTAII 258 >gi|78066952|ref|YP_369721.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77967697|gb|ABB09077.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 306 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 101/305 (33%), Gaps = 27/305 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + + L + + L I++ + G V F+ ANG GF D Sbjct: 13 RPLLFAACALACGASLAAEPLSGTLDKIRQSNLISIGHRETSVPFSYADANGKVIGFSQD 72 Query: 63 FCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + +A+ +++++P+ ++ R +Q+ +D+ T R + F Sbjct: 73 LCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--F 130 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + GI L+G ++ GTT+E L + M I + Sbjct: 131 STTFFVATTRLLTRTNSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMRIISAKD 190 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R AY D L ++ +P++ I+ S + + D ++ Sbjct: 191 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWQIVGTPQSSEAYGFMLRKDDPQFK 250 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY- 297 +V + + + + ++ GL+ D+ Sbjct: 251 ALVDGVL---------------VQLMKRGEIDTLYDKWFTKPVPPK-----GLSFDFAMS 290 Query: 298 RIIRH 302 +I+ Sbjct: 291 DVIKA 295 >gi|307248744|ref|ZP_07530757.1| hypothetical protein appser2_17100 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306854671|gb|EFM86861.1| hypothetical protein appser2_17100 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 298 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 109/256 (42%), Gaps = 19/256 (7%) Query: 1 MY-----KDFFVSILCLIILFFT--SFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49 M K + + L + + +S + IK++G ++ G+ F Sbjct: 21 MKLSTTLKTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGY 80 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V ANG +GFDV+ + +++ + P K++++ A R L+S ++D++ N T Sbjct: 81 VDANGKSQGFDVEIAKEIANDLLGSPDKMEFVLTEAANRVEYLKSNKVDLILANFTKTPE 140 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R + F G + K I+ + QL G ++ V GTT + F ++ Sbjct: 141 RAEV--VDFAAPYMNVALGVVSPKGALITDLKQLEGKTLLVNKGTTADAY----FTKNHP 194 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + + F++ E A + R A D + ++A + P+ V + + +APA Sbjct: 195 EINLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGPAEQIAPA 252 Query: 230 IIQGDTEWYNIVSWTH 245 + +G+ ++++ Sbjct: 253 VQKGNQALLDVINKKI 268 >gi|299531139|ref|ZP_07044551.1| extracellular solute-binding protein [Comamonas testosteroni S44] gi|298720842|gb|EFI61787.1| extracellular solute-binding protein [Comamonas testosteroni S44] Length = 293 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 95/256 (37%), Gaps = 7/256 (2%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++LC + + +A L ++ G + V F+ + NG G V+ Sbjct: 2 QLHSTVLCAALGLGFLGAVHADTLAKVRDSGRITLAYRESSVPFSYLD-NGKPIGMTVEL 60 Query: 64 CRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + ++ A+ ++++ + ++ R L + ID+ +T +R +G F Sbjct: 61 SQTVAEAVKKQLNLPALEVRWQAVTSQNRMPLLANGTIDLECGSTTNNTVRAKEVG--FA 118 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ G ++ K GI S + L G + + GTT L + ++ + Sbjct: 119 INHFYTGTRLLVKKSSGIQSYADLKGKTAAITTGTTNLQVLRKANAEQGWGMNIVMAKDH 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R A+ D LY L P + ++ D + P A + + D ++ Sbjct: 179 ADGFLLVENDRAAAFGMDDILLYGLIANAKNPRDFHVVADALQVEPYACMLRKDDPQFKQ 238 Query: 240 IVSWTHYAMVTAEELG 255 +V M+ + Sbjct: 239 LVDGVIGDMMKSGAFA 254 >gi|307703202|ref|ZP_07640148.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] gi|307623277|gb|EFO02268.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] Length = 264 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 103/252 (40%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFSLAAAKPAQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMIADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 116 FTSPYYTDSSGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISKRT-----ELLDDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAMV 249 + + Sbjct: 231 NDYLDSLVTKWT 242 >gi|293364951|ref|ZP_06611668.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|291316401|gb|EFE56837.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] Length = 273 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 103/252 (40%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 10 MKKKFFLSALLISLFSLAAAKPAQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 69 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 70 GIETDLAKMIADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 124 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 125 FTSPYYTDSSGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 184 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 185 SYPELITSLHAHRIDAFSVDRSILSGYISKRT-----ELLDDSFKPSDYGIVTKKSNTEL 239 Query: 238 YNIVSWTHYAMV 249 + + Sbjct: 240 NDYLDSLVTKWT 251 >gi|163734793|ref|ZP_02142231.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseobacter litoralis Och 149] gi|161391898|gb|EDQ16229.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseobacter litoralis Och 149] Length = 288 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 102/256 (39%), Gaps = 6/256 (2%) Query: 2 YKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + L + + + + L I G + G V F+ + N + G+ Sbjct: 4 KNTLLTAAVALGLSAPVAMADGHGGTLDKIAASGEIVIGHRESSVPFSYLDENQNPVGYS 63 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 +D C + A+ D I+Y+P+N K R + + ID+ +T L R + Sbjct: 64 IDLCMKIVDAVAAELDQELTIKYVPVNPKTRIALMANGTIDLECGSTTNNLTR--QQQVE 121 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + P+T+ G + K GI+SV+ L G ++ + GTT E + +A + + Sbjct: 122 YLPVTFVTGTKILTRKDSGINSVADLDGMAVALAQGTTNERAVMAAVEAAGLDVKILPVR 181 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R DAY D L+ L + P + ++ D +S P A + + D+ + Sbjct: 182 DHAEGMLSLETDRVDAYATDHILLHGLISKSKNPDDFAVVGDFLSFDPYALMVRRDDSAF 241 Query: 238 YNIVSWTHYAMVTAEE 253 + + E Sbjct: 242 ELVGKKALAEVFRTGE 257 >gi|295096601|emb|CBK85691.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 316 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 93/259 (35%), Gaps = 10/259 (3%) Query: 3 KDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 + ++L + + + S L I K G + G V F+ G Sbjct: 19 RKLATAMLVMGMSAGVVHAEDAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNTQKVVG 78 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D+ A+ A+ +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 79 YSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA 138 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + G + K I + L G ++ V +GTT+E+ L M I Sbjct: 139 A--FSDTIFVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLHKLNDEKKMDMRII 196 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D + L + +P I+ SK + +GD Sbjct: 197 SAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGTAQSKEAYGCMLRKGD 256 Query: 235 TEWYNIVSWTHYAMVTAEE 253 ++ ++ T T+ E Sbjct: 257 EDFKKLIDDTIAQAQTSGE 275 >gi|167564084|ref|ZP_02357000.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia oklahomensis EO147] Length = 297 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 93/258 (36%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + L + + L IK G + G + F+ + G+ Sbjct: 1 MKFPKAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQSQQVVGY 60 Query: 60 DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 DF + A+ +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 61 SRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAA 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + G + K G+ + L G ++ AGTT+E L + + M + I Sbjct: 121 --FSNTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + R A+ D + L + +P E VI+ S+ + + D Sbjct: 179 AKDHGDSFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDP 238 Query: 236 EWYNIVSWTHYAMVTAEE 253 + +V + + E Sbjct: 239 AFKKVVDDAIAQVEKSGE 256 >gi|241664919|ref|YP_002983279.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|240866946|gb|ACS64607.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 301 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 91/252 (36%), Gaps = 8/252 (3%) Query: 10 LCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC--- 64 L L L A L I+ + G+ + F+ + + GF D C Sbjct: 13 LALTSLLAIGAQAQALDGTLKKIQDSNTILIGVRESSIPFSYRDSKNEIVGFSADLCSRV 72 Query: 65 -RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 A+ I+ +P+ ++ R +Q+ +D+ T RE AF + Sbjct: 73 IDAVKKKTGKPNLDIKQIPVTSQNRTSLVQNGSVDLECGVTTHLKSRE--QQTAFSTTFF 130 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G + + K G+ L+G S+ AGTT+E L M + I + E Sbjct: 131 IAGTRLLTNVKSGVKDFPDLAGKSVITNAGTTSERILRKMNDEKKMNMNVISGKDYGESF 190 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 ++ R A+ D L + +P + V+ S + + D ++ +V Sbjct: 191 LTLQSGRVAAFMMDDVLLAGARTLAQKPDDWVVTGTPQSFEAYGFMLRRDDPQFKKLVDD 250 Query: 244 THYAMVTAEELG 255 T ++ + E+ Sbjct: 251 TMTGVMKSGEIK 262 >gi|167571226|ref|ZP_02364100.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia oklahomensis C6786] Length = 297 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 93/258 (36%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + L + + L IK G + G + F+ + G+ Sbjct: 1 MKFPKAMLMVAALSTFAGGAIAQETGTLKKIKDTGVIALGHRESSIPFSYYDQSQQVVGY 60 Query: 60 DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 DF + A+ +++ +P+ ++ R +Q+ +DI +T L R+ Sbjct: 61 SRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAA 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + G + K G+ + L G ++ AGTT+E L + + M + I Sbjct: 121 --FSNTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLREMNNKNQMGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + R A+ D + L + +P E VI+ S+ + + D Sbjct: 179 AKDHGDSFQTLETGRAVAFMMDDALLAGERAKAKQPGEWVIVGKPQSQEAYGCMMRKDDP 238 Query: 236 EWYNIVSWTHYAMVTAEE 253 + +V + + E Sbjct: 239 AFKKVVDDAIAQVEKSGE 256 >gi|187925335|ref|YP_001896977.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] gi|187716529|gb|ACD17753.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 297 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 97/260 (37%), Gaps = 7/260 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L + + + +A L IK G + G + F+ + G+ Sbjct: 1 MKVKKAALLLATLGLFTVGAHAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGY 60 Query: 60 DVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +F A+ + K++ P+ ++ R +Q+ +D+ +T R Sbjct: 61 SQEFALKVVEAVKQKLNMPNLKVKLTPVTSQNRIPLVQNGTVDMECGSTTNNAER--QQQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 AF + G + K GI + L G ++ AGTT+E L + +M + I Sbjct: 119 AAFSNTIFVIGTRLMTKKDSGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKSMGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D + L + ++ P + VI+ S I + D Sbjct: 179 AKDHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMIRKNDP 238 Query: 236 EWYNIVSWTHYAMVTAEELG 255 E+ +V + T+ E Sbjct: 239 EFKKVVDDAIAKVETSGEAD 258 >gi|302872379|ref|YP_003841015.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor obsidiansis OB47] gi|302575238|gb|ADL43029.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor obsidiansis OB47] Length = 266 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 92/250 (36%), Gaps = 12/250 (4%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 MYK F V ++ I + S+N L IKK G++ N + Sbjct: 1 MYKKFVVLVLLVAFFIPLLSGCSSNNQNMTTLEKIKKTKEFAVGMDNTFPPMEFADDNNN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD ++ + +K++ + ++ AL+SK+ D + T R+ + Sbjct: 61 TVGFDVDLANEIAKKLG---AKLKIVTVDWSGIQSALKSKKFDAIISCFSITDERKKAFN 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 LA + I S L G I VQA TT + + K N + Sbjct: 118 LAGPYLYIRQVIAV-KRGDSSIKSFEDLKGIKIGVQANTTGDSAVQKM-KFINYEKDVTR 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +ER+ + R A D + A P + I P + K P+ A+ + D Sbjct: 176 YERITDAFNDLDIGRIKAVVIDS--VVAYYYKKQNPEKFDIAPAELEKEPVGIALRKEDK 233 Query: 236 EWYNIVSWTH 245 E YN + Sbjct: 234 ELYNEIQKIL 243 >gi|206561695|ref|YP_002232460.1| periplasmic glutamate/aspartate-binding protein [Burkholderia cenocepacia J2315] gi|198037737|emb|CAR53681.1| periplasmic glutamate/aspartate-binding protein [Burkholderia cenocepacia J2315] Length = 297 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 94/258 (36%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M +++ L + + L IK G + G + F+ N G+ Sbjct: 1 MKFHKAVLTVAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60 Query: 60 DVD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + A+ + +++ +P+ ++ R +Q+ +DI +T L R Sbjct: 61 SREFQLKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLER--QQQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 AF + G + K G+ + L G ++ AGTT+E L + + I Sbjct: 119 AAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R A+ D + L + +P E VI+ S+ + +GD Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDA 238 Query: 236 EWYNIVSWTHYAMVTAEE 253 ++ +V + + E Sbjct: 239 DFKKVVDDAISQVEKSGE 256 >gi|209520965|ref|ZP_03269702.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209498602|gb|EDZ98720.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 300 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 95/258 (36%), Gaps = 7/258 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M ++ +F+ +A S L I++ G + G V F+ V +N GF Sbjct: 4 MNWSTVAVLVAATSASPGAFAQDATSTLAKIQQSGVIAIGHRETSVPFSYVDSNNQVIGF 63 Query: 60 DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 D C + A+ K++++P+ ++ R +Q+ +D+ T R+ Sbjct: 64 SQDLCNKVIDAVKVKTKRPDLKVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARQS--Q 121 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + + K GI L+G ++ GTT+E L + M I Sbjct: 122 VTFGDTFFVATTRLLTRKDSGIKDFPDLAGKTVVTNQGTTSERILRKMNEDKKMNMQIIS 181 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E + R AY D L + +PS+ +I S + + D Sbjct: 182 AKDYGEGRLTLESGRAVAYMMDDVLLAGTRTLTAKPSDWIITGTPQSSEAYGFMMRREDP 241 Query: 236 EWYNIVSWTHYAMVTAEE 253 E+ +V T + E Sbjct: 242 EFRKLVDDTLEQTMKGPE 259 >gi|312792974|ref|YP_004025897.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180114|gb|ADQ40284.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 266 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 95/251 (37%), Gaps = 14/251 (5%) Query: 1 MYKDF--FVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 MYK V ++ L I F + S N + L IKK G++ N + Sbjct: 1 MYKKAIALVLLIALFIPFLSGCSLNNQNMTTLEKIKKTKEFVVGMDNTFPPMEFTDDNNN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD ++ + +K++ + ++ AL+SK+ D + T R+ + Sbjct: 61 TVGFDVDLANEIAKKLG---AKLKIVAVDWSGIQSALKSKKFDAIISCFSITDERKKAFN 117 Query: 116 LAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 L + Q + K I S L G I VQA TT + + K N + Sbjct: 118 L--AGPYLYIRQVIAVKKGDSSIKSFEDLKGIKIGVQANTTGDSAVQKM-KFINYEKDVT 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +ER+ + R A D + A P + I P + + P+ A+ + D Sbjct: 175 RYERITDAFNDLNIGRIKAVVIDS--VVAYYYKKQNPEKFDIAPAQLEREPVGIALRKED 232 Query: 235 TEWYNIVSWTH 245 + YN + Sbjct: 233 KDLYNEIQKIL 243 >gi|186477321|ref|YP_001858791.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184193780|gb|ACC71745.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 297 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 98/258 (37%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L + + + +A L IK G + G + F+ + G+ Sbjct: 1 MKVKKAALLLATLGLFTVGAQAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGY 60 Query: 60 DVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +F A+ + K++ P+ ++ R +Q+ +D+ +T R Sbjct: 61 SQEFALKVVDAVKQKLNMPNLKVKLTPVTSQNRIPLVQNGTVDLECGSTTNNAER--QQQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 ++F + G + K G+ + L G ++ AGTT+E L + NM + I Sbjct: 119 VSFSNTIFVIGTRLMTKKDSGVKDWADLKGKTVVTTAGTTSERLLRKMNQDKNMGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D + L + ++ P + VI+ S + + D Sbjct: 179 AKDHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMLRKNDP 238 Query: 236 EWYNIVSWTHYAMVTAEE 253 E+ +V + T+ E Sbjct: 239 EFKKVVDDAIAKVETSGE 256 >gi|296162982|ref|ZP_06845759.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295886776|gb|EFG66617.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 297 Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 99/260 (38%), Gaps = 7/260 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L + + + +A L IK G + G + F+ + G+ Sbjct: 1 MKVKKAALLLATLGLFTVGAHAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGY 60 Query: 60 DVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +F A+ + K++ P+ ++ R +Q+ +D+ +T R Sbjct: 61 SQEFALKVVDAVKQKLNMPNLKVKLTPVTSQNRIPLVQNGTVDMECGSTTNNAER--QQQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 +AF + G + K GI + L G ++ AGTT+E L + +M + I Sbjct: 119 VAFSNTIFVIGTRLMTKKDSGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKSMGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D + L + ++ P++ VI+ S I + D Sbjct: 179 AKDHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPADFVIVGAPQSHEAYGCMIRKNDP 238 Query: 236 EWYNIVSWTHYAMVTAEELG 255 E+ +V + T+ E Sbjct: 239 EFKKVVDDAIAKVETSGEAD 258 >gi|91785182|ref|YP_560388.1| ABC glutamate/aspartate transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|91689136|gb|ABE32336.1| L-glutamate-binding protein / L-aspartate-binding protein [Burkholderia xenovorans LB400] Length = 297 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 98/260 (37%), Gaps = 7/260 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L + + + +A L IK G + G + F+ + G+ Sbjct: 1 MKVKKAALLLATLGLFTVGAHAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGY 60 Query: 60 DVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +F A+ + K++ P+ ++ R +Q+ +D+ +T R Sbjct: 61 SQEFALKVVDAVKQKLNMPNLKVKLTPVTSQNRIPLVQNGTVDMECGSTTNNAER--QQQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 +AF + G + K GI + L G ++ AGTT+E L + +M + I Sbjct: 119 VAFSNTIFVIGTRLMTKKDSGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKSMGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D + L + ++ P + VI+ S I + D Sbjct: 179 AKDHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMIRKNDP 238 Query: 236 EWYNIVSWTHYAMVTAEELG 255 E+ +V + T+ E Sbjct: 239 EFKKVVDDAIAKVETSGEAD 258 >gi|167036205|ref|YP_001671436.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166862693|gb|ABZ01101.1| extracellular solute-binding protein family 3 [Pseudomonas putida GB-1] Length = 290 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 62/260 (23%), Positives = 105/260 (40%), Gaps = 24/260 (9%) Query: 1 MYKDFFVSILC-LIILFFTSFSTNASI-------------LGDIKKRGFLKCGINTGLVG 46 M F +L L L + A L IK R L G+ T Sbjct: 1 MKTANFTKLLAPLFGLALLAGCNKADEPPKPAAASPATSYLETIKARDKLIVGVFTDKPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V G + GFD D R L+ + D +K++++ + R LQS ++D++ N Sbjct: 61 FGFVDEKGRYVGFDTDIGRRLAKDLLGDENKVEFVAVEPASRIPFLQSDKVDLILANMTV 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + F I+ + + L+ +I V GTT ++ L Sbjct: 121 TPERKE--AVDFTNPNLRVAVQAIVADGSPVQKLDDLADKTIIVTTGTTADIWLT----K 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-P 225 ++ + + FE+ E A R DAY D L++ N + +LP+++ P Sbjct: 175 NHPDWKLLKFEKNSESLQALATGRGDAYAQDNLILFSWAKQNPG---YRVLPELLGDEAP 231 Query: 226 LAPAIIQGDTEWYNIVSWTH 245 +APA+ +G+TE + V+ Sbjct: 232 IAPAVKKGNTELRDWVNAEL 251 >gi|53728918|ref|ZP_00134502.2| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209158|ref|YP_001054383.1| antigenic protein, ABC transporter-like protein [Actinobacillus pleuropneumoniae L20] gi|190151024|ref|YP_001969549.1| antigenic protein, ABC transporter-like protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264383|ref|ZP_07545970.1| hypothetical protein appser13_17750 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126097950|gb|ABN74778.1| antigenic protein, ABC transporter-like protein [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|189916155|gb|ACE62407.1| antigenic protein, ABC transporter-like protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870270|gb|EFN02027.1| hypothetical protein appser13_17750 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 278 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 108/254 (42%), Gaps = 19/254 (7%) Query: 1 MY-----KDFFVSILCLIILFFT--SFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49 M K + + L + + +S + IK++G ++ G+ F Sbjct: 1 MKLSTTLKTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGY 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V ANG +GFDV+ + +++ + K++++ A R L+S ++D++ N T Sbjct: 61 VDANGKSQGFDVEIAKEIANDLLGSSDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPE 120 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R + F G + K IS + QL G ++ V GTT + F ++ Sbjct: 121 RAEV--VDFAAPYMNVALGVVSPKGALISDLKQLEGKTLLVNKGTTADAY----FTKNHP 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + + F++ E A + R A D + ++A + P+ V + + +APA Sbjct: 175 EINLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGPAEQIAPA 232 Query: 230 IIQGDTEWYNIVSW 243 + +G+ ++++ Sbjct: 233 VQKGNQALLDVINK 246 >gi|115358741|ref|YP_775879.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115284029|gb|ABI89545.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 298 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 86/251 (34%), Gaps = 8/251 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F + L + A L IK G + GI V F+ G Sbjct: 1 MDRRFRWLAVALTCALAGTAHAQALTGTLKKIKDTGIVSLGIRESSVPFSYSDNQQKNIG 60 Query: 59 FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D AL + + ++ +P+ ++ R LQ+ ID +T TL R+ Sbjct: 61 YSRDIAARIIDALKAELKAPNLTVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + G F K G+ + L+G ++ AGT+ E L + M I Sbjct: 121 A--FSNSIFLYGIRFSTRKDSGVKDFADLAGKTVATTAGTSDERLLRKLNEEKGMNMTII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D LY + P + + + A + + D Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVAGTPLVHENYACMMRKDD 238 Query: 235 TEWYNIVSWTH 245 + ++V Sbjct: 239 PAFKHVVDGVI 249 >gi|299068342|emb|CBJ39566.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum CMR15] Length = 301 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 90/255 (35%), Gaps = 8/255 (3%) Query: 7 VSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 +++ I A L I+ + G+ + F+ + GF D C Sbjct: 10 LALAGAIAASVLPAQAEALDGTLKKIQDSNTILIGVRESSIPFSYRDSKNQIIGFSADLC 69 Query: 65 R----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 A+ + ++Q +P+ ++ R +Q+ +D+ T RE AF Sbjct: 70 TRVIDAVKQKVGKPDLQVQQIPVTSQNRTALVQNGSVDLECGVTTHLKSRE--QQTAFST 127 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + G+ L+G S+ AGTT+E L M + I + Sbjct: 128 TFFIAATRLLTSVHSGVKDFPDLAGKSVITNAGTTSERILRKMNDEKKMSMNVISGKDYG 187 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E ++ R A+ D L + +P++ V+ S + + D ++ + Sbjct: 188 ESFLTLQSGRVQAFMMDDVLLAGARTLAQKPADWVVTGTPQSFEAYGFMLRRDDPQFKKL 247 Query: 241 VSWTHYAMVTAEELG 255 V T ++ E+ Sbjct: 248 VDDTLTGVMKRGEIN 262 >gi|170731989|ref|YP_001763936.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|169815231|gb|ACA89814.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 297 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 93/258 (36%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + L +++ L IK G + G + F+ N G+ Sbjct: 1 MKYHKAVLMAAALCAFASGAYAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60 Query: 60 DVD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + A+ + +++ +P+ ++ R +Q+ +DI +T L R Sbjct: 61 SREFQLKIVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLER--QQQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 AF + G + K G+ + L G ++ AGTT+E L + + I Sbjct: 119 AAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R A+ D + L + +P + VI+ S+ + +GD Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGDWVIVGTPQSEEAYGCMMRKGDA 238 Query: 236 EWYNIVSWTHYAMVTAEE 253 ++ +V + + E Sbjct: 239 DFKKVVDDAISQVEKSGE 256 >gi|187928559|ref|YP_001899046.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|187725449|gb|ACD26614.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] Length = 297 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 96/256 (37%), Gaps = 6/256 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + S L + L + +A L + G + G V F+ + A GF VD Sbjct: 4 RHTLASTLVVAGLTVAAQGIHAQTLEKVAAAGKITVGYREAAVPFSYLLAPNKAVGFSVD 63 Query: 63 FCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +A+ + + ++ +P+ R L + D+ +T T R + F Sbjct: 64 LTQAIVDDVRARLKKPSLQVDAIPVTGTNRIPLLVNGTYDLECGSTTNTSARGKDVA--F 121 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 ++ G + + GI + L+G ++ AG+T E L + HN+ I + Sbjct: 122 SINFFYAGTRLLTKRDSGIKNYPDLAGKTVASTAGSTNEKVLKKFAVEHNIDVQIISGKD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R A D LY L+ + P+ ++ + + P A + + D + Sbjct: 182 YADALKLVETGRATALALDDVLLYGLRANSANPAALEVVAETLQVEPYACMVRKDDPAFK 241 Query: 239 NIVSWTHYAMVTAEEL 254 +V T ++ + E Sbjct: 242 RLVDATITRLMKSGEF 257 >gi|330827244|ref|YP_004390547.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans K601] gi|329312616|gb|AEB87031.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus denitrificans K601] Length = 295 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 96/237 (40%), Gaps = 6/237 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKI 78 A L I G + V F+ + +G GF V+ A+ A+ K+ Sbjct: 22 QADTLKKIADTGKITVAYRESSVPFSYLAGSGGPVGFSVEITNAIVDAVKKQLNKPGLKV 81 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++ R LQ+ IDI +T +R + F ++ G ++ K GI Sbjct: 82 DMQAVTSQNRIPLLQNGTIDIECGSTTNNAVRGKDVQ--FAINYFYTGTRLLVKKNSGIK 139 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + L+ + GTT + Y K +N+ + ++ + ++ A R +A+ D Sbjct: 140 NWADLARKKVSSTTGTTNAQVIRKYSKDNNLDFDIVLGKDHDDSMLLVDAGRAEAFAMDD 199 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L+ LK P++ ++ D + P A + + D ++ +V+ M+ + E Sbjct: 200 ILLFGLKNNARNPADWDVVGDALQVEPYACMMRKDDPQFQKLVNGVIGGMMKSGEFE 256 >gi|300312815|ref|YP_003776907.1| amino acid ABC transporter/signal transduction system periplasmic protein [Herbaspirillum seropedicae SmR1] gi|300075600|gb|ADJ64999.1| ABC-type amino acid transport/signal transduction system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 305 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 97/256 (37%), Gaps = 7/256 (2%) Query: 5 FFVSILCLIIL-FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 +L ++ + S L IK + G T + F+ N G+ D Sbjct: 13 MLSMMLAVLPQQACAADSALGPTLQKIKDANLIAIGHRTSSIPFSYYDENQQVIGYSQDL 72 Query: 64 CR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 C A+ + I +++ +P+ ++ R LQ+ ID+ T R ++F Sbjct: 73 CNKVIDAVKTKIGAAKLEVRMVPVTSQNRTPLLQNGTIDLECGVTSNLKSR--WQQVSFA 130 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + + GI L+G ++ AGTT+E L + + M + Sbjct: 131 TNFFVASSRILTKRDSGIKDFPDLAGKAVVTNAGTTSEQLLRNLNEHRKMGMQIQSAKDY 190 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E ++ R AY D L + T +P++ V+ + P A + + D ++ Sbjct: 191 GEAFLILQSGRVAAYVMDDVLLAGARTTAQKPNDWVLTGNPFGAEPYAFMVRRDDPQFKQ 250 Query: 240 IVSWTHYAMVTAEELG 255 +V T ++ + E+ Sbjct: 251 LVDDTLSGLMKSGEIK 266 >gi|160880801|ref|YP_001559769.1| extracellular solute-binding protein [Clostridium phytofermentans ISDg] gi|160429467|gb|ABX43030.1| extracellular solute-binding protein family 3 [Clostridium phytofermentans ISDg] Length = 287 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 66/265 (24%), Positives = 111/265 (41%), Gaps = 22/265 (8%) Query: 1 MYKDFFVSILCLIILFF------------TSFSTNASILGDIKKRGFLKCGINTGLVGFA 48 M K IL L ++ T + A L DIKK G +K G+ + F Sbjct: 1 MKKKILGVILSLTMVAGILTGCGQTKETNTGATAKARTLEDIKKDGKIKIGVFSDKNPFG 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V +NGD +G+DV F + ++ + KI+++ + A R L+S ++D+ N T Sbjct: 61 YVDSNGDIQGYDVYFAKRIAKDLLGSEDKIEFVYMEAANRVEYLKSAKVDVTLANFTVTK 120 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 + S + F G + I+ V QL ++ V GTT E F ++ Sbjct: 121 --DRSEQVDFALPYMKVALGVVSPDNALITDVDQLKDKTLIVVKGTTAETY----FMENH 174 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + F+ +E A R DA++ D + + A V + I S +AP Sbjct: 175 SDIKLLKFDEYQEAYDALLDGRGDAFSTDNTEVLAWA--LQNKGFSVGIESIGSIDAIAP 232 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEE 253 A+ +G+ E + ++ A+ AEE Sbjct: 233 AVQKGNKELLDWINNEIKAL--AEE 255 >gi|307262182|ref|ZP_07543833.1| hypothetical protein appser12_17280 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868159|gb|EFM99984.1| hypothetical protein appser12_17280 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 298 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 109/254 (42%), Gaps = 19/254 (7%) Query: 1 MY-----KDFFVSILCLIILFFT--SFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49 M K + + L + + +S + IK++G ++ G+ F Sbjct: 21 MKLSTTLKTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGY 80 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V ANG +GFDV+ + +++ + P K++++ A R L+S ++D++ N T Sbjct: 81 VDANGKSQGFDVEIAKEIANDLLGSPDKMEFVLTEAANRVEYLKSNKVDLILANFTKTPE 140 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R + F G + K I+ + QL G ++ V GTT + F ++ Sbjct: 141 RAEV--VDFAAPYMNVALGVVSPKGALITDLKQLEGKTLLVNKGTTADAY----FTKNHP 194 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + + F++ E A + R A D + ++A + P+ V + + +APA Sbjct: 195 EINLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGPAEQIAPA 252 Query: 230 IIQGDTEWYNIVSW 243 + +G+ ++++ Sbjct: 253 VQKGNQALLDVINK 266 >gi|254246322|ref|ZP_04939643.1| Extracellular solute-binding protein, family 12 [Burkholderia cenocepacia PC184] gi|124871098|gb|EAY62814.1| Extracellular solute-binding protein, family 12 [Burkholderia cenocepacia PC184] Length = 300 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 92/258 (35%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + L + + L IK G + G + F+ N G+ Sbjct: 4 MKYHKAVLMAAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 63 Query: 60 DVD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + A+ + +++ +P+ ++ R +Q+ +DI +T L R Sbjct: 64 SREFQLKIVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLER--QQQ 121 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 AF + G + K G+ + L G ++ AGTT+E L + + I Sbjct: 122 AAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIIS 181 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R A+ D + L + +P E VI+ S+ + +GD Sbjct: 182 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDA 241 Query: 236 EWYNIVSWTHYAMVTAEE 253 ++ +V + + E Sbjct: 242 DFKKVVDDAISQVEKSGE 259 >gi|187930729|ref|YP_001901216.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|187727619|gb|ACD28784.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] Length = 301 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 92/256 (35%), Gaps = 6/256 (2%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F L ++ L I+ + G+ + F+ + + GF D Sbjct: 9 RTFPLALASLLAIGAHAQALDGTLKKIQDSNTILIGVRESSIPFSYRDSKNEIVGFSADL 68 Query: 64 C----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 C A+ I+++P+ ++ R +Q+ +D+ T RE AF Sbjct: 69 CSRVIDAVRKKTGKPNLDIKHIPVTSQNRTSLVQNGSVDLECGVTTHLKSRE--QQTAFS 126 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + + K G+ L+G S+ AGTT+E L M + I + Sbjct: 127 TTFFIAGTRLLTNVKSGVKDFPDLAGKSVITNAGTTSERILRRMNDEKKMNMNVISGKDY 186 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E ++ R A+ D L + +P + V+ S + + D ++ Sbjct: 187 GESFLTLQSGRVAAFMMDDVLLAGARTLAQKPDDWVVTGTPQSFEAYGFMLRRDDPQFKK 246 Query: 240 IVSWTHYAMVTAEELG 255 +V T ++ + E+ Sbjct: 247 LVDDTMAGVMKSGEVK 262 >gi|300722327|ref|YP_003711612.1| glutamate/aspartate ABC transporter periplasmic-binding protein [Xenorhabdus nematophila ATCC 19061] gi|297628829|emb|CBJ89407.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) [Xenorhabdus nematophila ATCC 19061] Length = 295 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 95/249 (38%), Gaps = 7/249 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L L + L IK G + G V FA +N + G+ Sbjct: 1 MRKLMLTMML-LGAVGAAHAEELTGTLKKIKDTGMIAVGHRESSVPFAYYDSNQNVIGYA 59 Query: 61 VDFCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 D+ A+ + + +++ +P+ ++ R LQ+ + +T T R+ Sbjct: 60 QDYSNMIVDAIKAKLNMPNLQVKLIPVTSQNRIPLLQNGTYNFECGSTTNTPERQKQAA- 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + + +K GI L+G ++ V AGTT+E+ L NMK I Sbjct: 119 -FSNTIFIVSTRLLTNKDSGIKGFDDLAGKNVVVSAGTTSEIILNKLNDEKNMKMRIISA 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D + L + +P + +I+ + S+ + + D + Sbjct: 178 KDHGDSFRTLESGRAAAFMVDDALLAGERAKAKKPDQWLIVGEPQSREGYGCLMRKDDAQ 237 Query: 237 WYNIVSWTH 245 + +V Sbjct: 238 FKALVDEVI 246 >gi|330973079|gb|EGH73145.1| extracellular solute-binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 304 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 89/258 (34%), Gaps = 8/258 (3%) Query: 4 DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDV 61 + + ++ F+ L IK+ G + G + F+ + A+G G+ Sbjct: 6 HLLGAAITAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPVGYSH 65 Query: 62 DFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D + AI D K++Y + ++ R +Q+ +D+ +T + R + Sbjct: 66 DIQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVD 123 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + G + K L G ++ AGTT+E L M + I + Sbjct: 124 FSIGIFEVGTRLLAKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNTDKQMGMNVISAK 183 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R A+ D + L +P + + S + +GD + Sbjct: 184 DHGESFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPF 243 Query: 238 YNIVSWTHYAMVTAEELG 255 V A + E+ Sbjct: 244 KKAVDDAIVATYKSGEIN 261 >gi|221214523|ref|ZP_03587494.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD1] gi|221165780|gb|EED98255.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD1] Length = 378 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 92/258 (35%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + L + + L IK G + G + F+ N G+ Sbjct: 82 MKYHKAVLMVAALCAFASGAQAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 141 Query: 60 DVD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + A+ + +++ +P+ ++ R +Q+ +DI +T R Sbjct: 142 SREFQLKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNAER--QQQ 199 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 AF + G + K G+ + L G ++ AGTT+E L M + I Sbjct: 200 AAFSNTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQMGMNIIS 259 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R A+ D + L + +P E VI+ S+ + +GD Sbjct: 260 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDP 319 Query: 236 EWYNIVSWTHYAMVTAEE 253 E+ +V + + E Sbjct: 320 EFKKVVDDAIAQVEKSGE 337 >gi|172063476|ref|YP_001811127.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171995993|gb|ACB66911.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 298 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 85/251 (33%), Gaps = 8/251 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F + L + L IK G + GI V F+ G Sbjct: 1 MDRRFRWLAVALTCALAGTAHAQGLTGTLKKIKDTGIVSLGIRESSVPFSYSDNQQKNIG 60 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + A+ + ++ +P+ ++ R LQ+ ID +T TL R+ Sbjct: 61 YSRDIAARIIDALKVELKAPNLTVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + G F K G+ + L+G ++ AGT+ E L + M I Sbjct: 121 A--FSNSIFLYGIRFSTRKDSGVKDFADLAGKTVATTAGTSDERLLRKLNEEKGMNMTII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D LY + P + + + A + + D Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVAGTPLVHENYACMMRKDD 238 Query: 235 TEWYNIVSWTH 245 + ++V Sbjct: 239 PAFKHVVDGVI 249 >gi|239503576|ref|ZP_04662886.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB900] Length = 286 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 22/269 (8%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46 M+K +S L + + T+ S S L +KK G L+ + Sbjct: 1 MFKRNSIKILSSLAVAGVLLTACSKTPSTEQASNAQTDHSLEQVKKNGVLRVAVFADDPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V + G+ +GFDV + ++ + D K++++ A R L+S + D++ Sbjct: 61 FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVLATFTV 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + F G + K K I+ ++QL G ++ V GT+++ F Sbjct: 121 TPERKEV--VDFAEPYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDTY----FTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 H K + + FER + A R DA + D + YAL PS + I + + Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 APA+ +G+T+ N ++ + T+ E+ Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIK 261 >gi|260550584|ref|ZP_05824793.1| ArtI protein [Acinetobacter sp. RUH2624] gi|260406295|gb|EEW99778.1| ArtI protein [Acinetobacter sp. RUH2624] Length = 286 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 22/269 (8%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46 M+K +S L + + T+ S S L +KK G L+ + Sbjct: 1 MFKRNSIKILSSLAVAGVLLTACSKTPSTEQASNSQEDHSLEQVKKNGVLRVAVFADDPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V + G+ +GFDV + ++ + D K++++ A R L+S + D++ Sbjct: 61 FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + F G + K K I+ ++QL G ++ V GT+++ F Sbjct: 121 TPERKEV--VDFAEPYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDTY----FTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 H K + + FER + A R DA + D + YAL PS + I + + Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 APA+ +G+T+ N ++ + T+ E+ Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIK 261 >gi|193077069|gb|ABO11827.2| ArtI protein [Acinetobacter baumannii ATCC 17978] Length = 286 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 22/269 (8%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46 M+K +S L + + T+ S S L +KK G L+ + Sbjct: 1 MFKRNSIKILSSLAVAGVLLTACSKTPSTEQASNAQEDHSLEQVKKNGVLRVAVFADDPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V + G+ +GFDV + ++ + D K++++ A R L+S + D++ Sbjct: 61 FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + F G + K K I+ ++QL G ++ V GT+++ F Sbjct: 121 TPERKEV--VDFAEPYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDTY----FTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 H K + + FER + A R DA + D + YAL PS + I + + Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 APA+ +G+T+ N ++ + T+ E+ Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIK 261 >gi|169796305|ref|YP_001714098.1| amino acid ABC transporter periplasmic substrate-binding protein [Acinetobacter baumannii AYE] gi|213156959|ref|YP_002319004.1| ABC transporter, periplasmic binding protein [Acinetobacter baumannii AB0057] gi|215483764|ref|YP_002325989.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB307-0294] gi|294837743|ref|ZP_06782426.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp. 6013113] gi|294859370|ref|ZP_06797139.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp. 6013150] gi|301344840|ref|ZP_07225581.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB056] gi|301510867|ref|ZP_07236104.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB058] gi|301596929|ref|ZP_07241937.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB059] gi|169149232|emb|CAM87114.1| putative amino acid transport protein (ABC superfamily, peri_bind) [Acinetobacter baumannii AYE] gi|213056119|gb|ACJ41021.1| ABC transporter, periplasmic binding protein [Acinetobacter baumannii AB0057] gi|213987452|gb|ACJ57751.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB307-0294] Length = 286 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 63/269 (23%), Positives = 115/269 (42%), Gaps = 22/269 (8%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46 M+K +S L + + T+ S S L +KK G L+ + Sbjct: 1 MFKRNSIKILSSLAVAGVLLTACSKTPSTEQASNAQEDHSLEQVKKNGVLRVAVFADDPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V + G+ +GFDV + ++ + D K++++ A R L+S + D++ Sbjct: 61 FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + F G + K + I+ ++QL G ++ V GT+++ F Sbjct: 121 TPERKEV--VDFAEPYLKGAFGIVSPKARPITDIAQLEGKTLIVNKGTSSDTY----FTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 H K + + FER + A R DA + D + YAL PS + I + + Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 APA+ +G+T+ N ++ + T+ E+ Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIK 261 >gi|319791997|ref|YP_004153637.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315594460|gb|ADU35526.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 300 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 104/255 (40%), Gaps = 7/255 (2%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFC 64 L L + + + L IK+ G ++ G + F+ A+ G+ D C Sbjct: 10 LALGLTLAFTCGAASAQDGGTLQKIKESGTIQIGARDSQIPFSYKLSADSAPIGYTNDIC 69 Query: 65 ----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 A+ + + +++Y LN+ R LQ+ +D+ T T R+ + F P Sbjct: 70 LKIVDAVKAKLGLSKIEVRYTMLNSTNRIPLLQNGTVDLDCATTTNTTQRQA--QVDFAP 127 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + K GI+++S L+G ++ +G+T+ L K+ ++ + I + Sbjct: 128 SHFVTNITAAVRKNSGINALSDLNGKNVATVSGSTSIQLLRGARKSGTIEVNEIAGKDTS 187 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + R DAY D L + + P E+ +L + + + P + + D ++ + Sbjct: 188 DGFLLLSTGRADAYVLDDVQLAGMIASATNPGEYKLLKESLRQEPYGIMLRKDDPQFKAL 247 Query: 241 VSWTHYAMVTAEELG 255 V T ++ + + Sbjct: 248 VDETVTGLMKSGAIE 262 >gi|299770571|ref|YP_003732597.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp. DR1] gi|298700659|gb|ADI91224.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp. DR1] Length = 286 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 63/269 (23%), Positives = 115/269 (42%), Gaps = 22/269 (8%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46 M+K +S + + + T+ S S L +KK G L+ + Sbjct: 1 MFKRNSVKILSSIAVAGVLLTACSKTPSTEQASNAQTDHSLEQVKKNGVLRVAVFADDPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V + G+ +GFDV + ++ + D K++++ A R L+S + D++ Sbjct: 61 FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + F G + K K I+ ++QL G ++ V GT+++ F Sbjct: 121 TPERKEV--VDFSEPYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDTY----FTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 H K + + FER + A R DA + D + YAL PS + I + + Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 APA+ +G+T+ N ++ + T+ E+ Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIK 261 >gi|193063399|ref|ZP_03044489.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli E22] gi|194429723|ref|ZP_03062239.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli B171] gi|260842881|ref|YP_003220659.1| periplasmic-binding component GltI [Escherichia coli O103:H2 str. 12009] gi|192930983|gb|EDV83587.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli E22] gi|194412204|gb|EDX28510.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli B171] gi|257758028|dbj|BAI29525.1| periplasmic-binding component GltI [Escherichia coli O103:H2 str. 12009] gi|323158891|gb|EFZ44902.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli E128010] Length = 302 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 87/241 (36%), Gaps = 6/241 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---- 74 + S L I K G + G V F+ G+ D+ A+ A+ Sbjct: 25 AAPVAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 84 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +++ +P+ ++ R LQ+ D +T + R+ F + G + K Sbjct: 85 DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKG 142 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + L ++ V +GTT+E+ L + M I + + + R A+ Sbjct: 143 GDIKDFADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 202 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 203 MMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEA 262 Query: 255 G 255 Sbjct: 263 E 263 >gi|213609637|ref|ZP_03369463.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 285 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 84/241 (34%), Gaps = 6/241 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDD 74 S L I K G + G V F+ G+ D+ A+ + Sbjct: 8 GAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEVVKKKLNKP 67 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +++ +P+ ++ R LQ+ D +T L R+ F + G + K Sbjct: 68 DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAA--FSDTIFVVGTRLLTKKG 125 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I L G ++ V +GTT+E+ L + M I + + + R A+ Sbjct: 126 GDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRIISAKDHGDSFRTLESGRAVAF 185 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L + +P I+ S+ + + D E+ ++ T T+ E Sbjct: 186 MMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKNDPEFKKLMDDTIAQAQTSGEA 245 Query: 255 G 255 Sbjct: 246 E 246 >gi|167038160|ref|YP_001665738.1| extracellular solute-binding protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116569|ref|YP_004186728.1| family 3 extracellular solute-binding protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|326389621|ref|ZP_08211187.1| extracellular solute-binding protein family 3 [Thermoanaerobacter ethanolicus JW 200] gi|166856994|gb|ABY95402.1| extracellular solute-binding protein, family 3 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929660|gb|ADV80345.1| extracellular solute-binding protein family 3 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|325994336|gb|EGD52762.1| extracellular solute-binding protein family 3 [Thermoanaerobacter ethanolicus JW 200] Length = 261 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 95/262 (36%), Gaps = 17/262 (6%) Query: 1 MYKD----FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD- 55 M K F + L ++ + A+ L IK++G + G + + K G+ Sbjct: 1 MNKKTLFVFLTMTIILGLILSACGNKPANTLDKIKEKGVIVMGTSADFPPYEFHKVEGNK 60 Query: 56 --WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 GFDVD A++ + ++ ++ K ALQ+ +ID+ T R Sbjct: 61 DTIVGFDVDIANAIAKKLGVK---LEIKDMDFKGLIPALQAGRIDMAIAGMTPTPERAK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + Y Q ++ IS L G ++ VQ GTT+E Sbjct: 117 -SVDFSDLYYDSKQVVVVRNDSPISKFDDLKGKTVAVQIGTTSEEAAKKI-----PDVKL 170 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 RV + + RCDA + + A + ++ A A+ +G Sbjct: 171 KQLNRVGDAFMDLKNGRCDAIVLENTVANAYLKEYKDMKILNMKEINTVENGSAVAVAKG 230 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 + E NI++ + + E Sbjct: 231 NKELVNIINDVIKELKASGEYD 252 >gi|312171723|emb|CBX79981.1| putative glutamate/aspartate ABC transport system, periplasmic component [Erwinia amylovora ATCC BAA-2158] Length = 309 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 52/270 (19%), Positives = 100/270 (37%), Gaps = 20/270 (7%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNAS------------ILGDIKKRGFLKCGINTGLVGF 47 M + + + I + + +A L I K G + G V F Sbjct: 1 MKFRKLGLCLALAGIASGIAHAEDAKAPATADAQQQTHTLEKIAKNGVIVVGHRESSVPF 60 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRN 103 + G+ D+ A+ +AI +++ LP+ ++ R LQ+ D + Sbjct: 61 SYYDNQQKVVGYSQDYSDAIVAAIKKKLNKPDLQVKMLPVTSQNRIPLLQNGTYDFECGS 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T + R+ +F + G ++ K I + L G ++ V +GTT+E+ L Sbjct: 121 TTNNIERQK--QASFSNSIFVVGTRLLVKKGGAIKDFADLKGKTVVVTSGTTSEILLNKL 178 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 M + + + + R A+ D + L + +PSE IL S+ Sbjct: 179 NDEQKMGMRIVSAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPSEWEILGTPQSR 238 Query: 224 SPLAPAIIQGDTEWYNIVSWTH-YAMVTAE 252 + +GD+E+ ++ T A + E Sbjct: 239 EAYGCMLRKGDSEFKKLMDDTIVQAQTSGE 268 >gi|293608419|ref|ZP_06690722.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828992|gb|EFF87354.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 286 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 22/269 (8%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46 M+K +S L + + T+ S S L +KK G L+ + Sbjct: 1 MFKRNSIKILSSLAVAGVLLTACSKTPSTEQAGNAQADHSLEQVKKNGVLRVAVFADDPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V + G+ +GFDV + ++ + D K++++ A R L+S + D++ Sbjct: 61 FGFVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + F G + K K I+ ++QL G ++ V GT+++ F Sbjct: 121 TPERKEV--VDFAEPYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDTY----FTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 H K + + FER + A R DA + D + YAL PS + I + + Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 APA+ +G+T+ N ++ + T+ E+ Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIK 261 >gi|184157761|ref|YP_001846100.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii ACICU] gi|294842167|ref|ZP_06786850.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp. 6014059] gi|183209355|gb|ACC56753.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Acinetobacter baumannii ACICU] gi|322508071|gb|ADX03525.1| ArtI protein [Acinetobacter baumannii 1656-2] gi|323517653|gb|ADX92034.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii TCDC-AB0715] Length = 286 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 22/269 (8%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46 M+K +S L + + T+ S S L +KK G L+ + Sbjct: 1 MFKRNSIKILSSLAVAGVLLTACSKTPSTEQASNAQADHSLEQVKKNGVLRVAVFADDPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V + G+ +GFDV + ++ + D K++++ A R L+S + D++ Sbjct: 61 FGFVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + F G + K K I+ ++QL G ++ V GT+++ F Sbjct: 121 TPERKEV--VDFAEPYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDTY----FTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 H K + + FER + A R DA + D + YAL PS + I + + Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 APA+ +G+T+ N ++ + T+ E+ Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIK 261 >gi|134291750|ref|YP_001115519.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134134939|gb|ABO59264.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia vietnamiensis G4] Length = 296 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 92/259 (35%), Gaps = 6/259 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F + L+ S + A L I + G + V F+ + GF Sbjct: 1 MRHRSFAVLATLLAACVASTAACAQTLDKISRSGRIVVSYREAAVPFSYLLTPHKAVGFS 60 Query: 61 VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD A+ + ++ Y+P+ + R L D+ +T T R + Sbjct: 61 VDVTEAIVDDVRKTLRRPDLRVAYVPVTGQNRIPLLVDGSYDLECGSTTNTSARGKDVA- 119 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F ++ G + + I + L+ ++ AG+T E TL A ++ ++ Sbjct: 120 -FSINYFYAGTRLMAKRASHIGDYADLAHQAVATVAGSTNEKTLRRELAARHIDADVVLA 178 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + A D LY L+ D P V+ D + P A + + D Sbjct: 179 KDYADALQMVATDKVAALALDDVLLYGLRANADDPGSWVVAGDALQVEPYACMVRKDDPA 238 Query: 237 WYNIVSWTHYAMVTAEELG 255 + +V T ++ + E Sbjct: 239 FKRLVDGTLTRLIRSGEFA 257 >gi|319408772|emb|CBI82429.1| amino-acid ABC transporter binding protein [Bartonella schoenbuchensis R1] Length = 302 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 97/258 (37%), Gaps = 5/258 (1%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++I + L IK G + G+ +G A NG + GF Sbjct: 1 MKKSLLAFSAAIVIGLTSMVQAQNDTLEKIKTTGEITLGVRESSIGLAYAIGNGKYTGFH 60 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + + I KI YLP+ ++ R LQ+ D +T R Sbjct: 61 TEMAEYIIDDISKKIGQSIKIHYLPITSQNRIPLLQNGTYDFECGSTTNDSSRNKEAA-- 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F TY + + K GI S+ L+G ++ GTT+ + +A N+ + + + Sbjct: 119 FAYTTYVEEVRIAVKKNSGIKSIEDLNGKTVATTTGTTSVQLIRKNKRAKNINFKVVTGK 178 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R DA+ D S L + PS+++IL ++S P+A + D Sbjct: 179 DHGDSFLLLESGRADAFVMDASILSGHISKSKNPSDYIILDTVLSIEPIACMLRLNDKNL 238 Query: 238 YNIVSWTHYAMVTAEELG 255 ++ + + L Sbjct: 239 EQEINNSIMRQIKDGSLE 256 >gi|307250985|ref|ZP_07532911.1| hypothetical protein appser4_17490 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307255603|ref|ZP_07537408.1| hypothetical protein appser9_18280 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260054|ref|ZP_07541766.1| hypothetical protein appser11_18400 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306857013|gb|EFM89143.1| hypothetical protein appser4_17490 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306861452|gb|EFM93441.1| hypothetical protein appser9_18280 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865890|gb|EFM97766.1| hypothetical protein appser11_18400 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 298 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 108/254 (42%), Gaps = 19/254 (7%) Query: 1 MY-----KDFFVSILCLIILFFT--SFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49 M K + + L + + +S + IK++G ++ G+ F Sbjct: 21 MKLSTTLKTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGY 80 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V ANG +GFDV+ + +++ + K++++ A R L+S ++D++ N T Sbjct: 81 VDANGKSQGFDVEIAKEIANDLLGSSDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPE 140 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R + F G + K I+ + QL G ++ V GTT + F ++ Sbjct: 141 RAEV--VDFAAPYMNVALGVVSPKGALITDLKQLEGKTLLVNKGTTADAY----FTKNHP 194 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + + F++ E A + R A D + ++A + P+ V + + +APA Sbjct: 195 EINLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGPAEQIAPA 252 Query: 230 IIQGDTEWYNIVSW 243 + +G+ ++++ Sbjct: 253 VQKGNQALLDVINK 266 >gi|319765052|ref|YP_004128989.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|317119613|gb|ADV02102.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] Length = 295 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 97/237 (40%), Gaps = 6/237 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKI 78 A L I G + V F+ + +G GF V+ A+ A+ K+ Sbjct: 22 QADTLKKIADTGKITVAYRESSVPFSYLAGSGGPVGFSVEITNAIVDAVKKQLNKPGLKV 81 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + ++ R LQ+ IDI +T +R + F ++ G ++ K GI Sbjct: 82 DMQAVTSQNRIPLLQNGTIDIECGSTTNNAVRGKDVQ--FAINYFYTGTRLLVKKNSGIK 139 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + L+ + GTT + Y K +N+ + ++ + ++ A R +A+ D Sbjct: 140 NWADLARKKVSSTTGTTNAQVIRKYSKDNNLDFDIVLGKDHDDSMLLVDAGRAEAFAMDD 199 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L+ LK P++ ++ D + P A + + D ++ +V+ +M+ + E Sbjct: 200 ILLFGLKNNARNPADWDVVGDALQVEPYACMMRKDDPQFQKLVNGVIGSMMKSGEFE 256 >gi|307257780|ref|ZP_07539537.1| hypothetical protein appser10_17650 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863686|gb|EFM95612.1| hypothetical protein appser10_17650 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 298 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 109/254 (42%), Gaps = 19/254 (7%) Query: 1 MY-----KDFFVSILCLIILFFT--SFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49 M K + + L + + +S + IK++G ++ G+ F Sbjct: 21 MKLSTTLKTLLATAITAFALTACDNANNAQSSTAKDSVAQIKEKGVIRIGVFGDKPPFGH 80 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V ANG +GFDV+ + +++ + P K++++ A R L+S ++D++ N T Sbjct: 81 VDANGKSQGFDVEIAKEIANDLLGSPDKVEFVLTEAANRVEYLKSNKVDLILANFTKTPE 140 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R + F G + K IS + QL G ++ V GTT + F ++ Sbjct: 141 RAEV--VDFATPYMNVALGVVSPKGALISDLKQLEGKTLLVNKGTTADAY----FTKNHP 194 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + + F++ E A + R A D + ++A + P+ V + + +APA Sbjct: 195 EINLLKFDQNTETFDALKDGRGVALAHDNALVWAWA--KENPTFDVAIGSVGPAEQIAPA 252 Query: 230 IIQGDTEWYNIVSW 243 + +G+ ++++ Sbjct: 253 VKKGNQALLDVINK 266 >gi|325121846|gb|ADY81369.1| putative ABC transporter, periplasmic binding protein, amino acid [Acinetobacter calcoaceticus PHEA-2] Length = 286 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 22/269 (8%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46 M+K +S L + + T+ S S L +KK G L+ + Sbjct: 1 MFKRNSIKILSGLAVAGVLLTACSKTPSTEQASNTQEDHSLEQVKKNGVLRVAVFADDPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V + G+ +GFDV + ++ + D K++++ A R L+S + D++ Sbjct: 61 FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + F G + K K I+ ++QL G ++ V GT+++ F Sbjct: 121 TPERKEV--VDFAEPYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDTY----FTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 H K + + FER + A R DA + D + YAL PS + I + + Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 APA+ +G+T+ N ++ + T+ E+ Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIN 261 >gi|300715838|ref|YP_003740641.1| Glutamate/aspartate periplasmic-binding protein [Erwinia billingiae Eb661] gi|299061674|emb|CAX58790.1| Glutamate/aspartate periplasmic-binding protein [Erwinia billingiae Eb661] Length = 300 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 88/237 (37%), Gaps = 6/237 (2%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PS 76 ++ + L I K G + G V F+ G+ D+ A+ +AI Sbjct: 25 ASQSPTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVAAIKAKLNKPDL 84 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 +++ LP+ ++ R LQ+ D +T L R+ F + G ++ K Sbjct: 85 QVKMLPVTSQNRIPLLQNGTYDFECGSTTNNLERQKQAA--FSDTIFVIGTRLLVKKGSP 142 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I L G ++ V +GTT+E+ L M I + + + R A+ Sbjct: 143 IKDFPDLKGKTVVVTSGTTSEILLNKLNDEKKMDMRIISAKDHGDSFRTLESGRAVAFMM 202 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 D + L + +P VI+ SK + + D + ++ T T+ E Sbjct: 203 DDALLAGERAKAKKPDNWVIVGTPQSKEAYGCMLRKDDAGFKQLMDDTIAKAQTSGE 259 >gi|261822382|ref|YP_003260488.1| glutamate and aspartate transporter subunit [Pectobacterium wasabiae WPP163] gi|261606395|gb|ACX88881.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] Length = 298 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 90/259 (34%), Gaps = 6/259 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K IL A L +K G + G V F+ G+ Sbjct: 3 MRKLALSLILLGTAASAAQAEDLAGTLKKVKDNGVIVIGHRESSVPFSYYDNTQKVVGYS 62 Query: 61 VD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 A+ + +++ LP+ ++ R LQ+ D+ +T L R+ Sbjct: 63 QAYSDKIVDAIKKKLDAPNLQVKLLPITSQNRIPLLQNGTFDLECGSTTNNLERQKQAA- 121 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G + K G+ L+G ++ V +GTT+E+ L + +K I Sbjct: 122 -FSNTIFVVGTRLLTKKDSGVKDFPDLAGKTVVVTSGTTSEVLLNKLNEEKQLKMRIISA 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D + L + + I+ S+ + + D + Sbjct: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKSADQWDIVGKAQSEEAYGCMLRKDDPQ 240 Query: 237 WYNIVSWTHYAMVTAEELG 255 + +V T + T+ E Sbjct: 241 FKKLVDDTIAEVQTSGEAE 259 >gi|262278742|ref|ZP_06056527.1| ArtI protein [Acinetobacter calcoaceticus RUH2202] gi|262259093|gb|EEY77826.1| ArtI protein [Acinetobacter calcoaceticus RUH2202] Length = 286 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 63/269 (23%), Positives = 115/269 (42%), Gaps = 22/269 (8%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46 M+K +S + + + T+ S S L +KK G L+ + Sbjct: 1 MFKRNSIKILSSIAVAGVLLTACSKTPSTEQASNTQEDQSLEQVKKNGVLRVAVFADDPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V + G+ +GFDV + ++ + D K++++ A R L+S + D++ Sbjct: 61 FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + F G + K K I+ ++QL G ++ V GT+++ F Sbjct: 121 TPERKEV--VDFAEPYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDTY----FTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 H K + + FER + A R DA + D + YAL PS + I + + Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 APA+ +G+T+ N ++ + T+ E+ Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIK 261 >gi|224824053|ref|ZP_03697161.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] gi|224603472|gb|EEG09647.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] Length = 301 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 89/253 (35%), Gaps = 9/253 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F + ++ S S+ A L IK+ G + + F+ + + Sbjct: 1 MSKSFKLLPAAVLAFSMISVSSAAELTGTLKKIKETGAIVLAHRDAAIPFSYLDNDQKPI 60 Query: 58 GFDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ + A++ + + + ++ + A+ R +Q+ +D+ +T + R+ Sbjct: 61 GYSWEIANAVAERVSKELNMPSLVVRTNLVTAQTRIPLIQNGTVDLECGSTTNNVERQR- 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + G + K G+ + L ++ AGTT E L M + Sbjct: 120 -QVDFSVGIFVTGTRLLTKKTSGVKDFADLKSKNVVTTAGTTAERLLKAMNADKQMDMNI 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + E ++ R A+ D L + PSE I S + + Sbjct: 179 ISAKDHGESFQMLQSGRASAFIVDDVIEAGLMTISKNPSEWAITGKPQSVENYGCMLRKD 238 Query: 234 DTEWYNIVSWTHY 246 D + +V Sbjct: 239 DPAFKKVVDDAIK 251 >gi|78065231|ref|YP_368000.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77965976|gb|ABB07356.1| L-glutamate-binding protein / L-aspartate-binding protein [Burkholderia sp. 383] Length = 297 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 92/258 (35%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + L + + L IK G + G + F+ N G+ Sbjct: 1 MKYQKAVLMFAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60 Query: 60 DVD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + A+ + +++ +P+ ++ R +Q+ +DI +T R Sbjct: 61 SREFQLKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNAER--QQQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 AF + G + K G+ + L G ++ AGTT+E L + + I Sbjct: 119 AAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R A+ D + L + +P E VI+ S+ + +GD Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDA 238 Query: 236 EWYNIVSWTHYAMVTAEE 253 ++ +V + + E Sbjct: 239 DFKKVVDDAISQVEKSGE 256 >gi|237665766|ref|ZP_04525754.1| extracellular solute-binding protein, family 3 [Clostridium butyricum E4 str. BoNT E BL5262] gi|237658713|gb|EEP56265.1| extracellular solute-binding protein, family 3 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 286 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 66/285 (23%), Positives = 116/285 (40%), Gaps = 28/285 (9%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNA-----------SILGDIKKRGFLKCGINTGLVGFA 48 M K +IL + L TS + S + IK+RG +K G+ + F Sbjct: 1 MKKLRKLAAILVVGSLALTSLTGCGTVADKSGQENKSSIEAIKQRGTIKIGVFSDKAPFG 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V +NG+ +GFDV + + + D SK +++ ++A R L+S ++D++ N T Sbjct: 61 YVDSNGENQGFDVYIAKRFAKDLLGDESKAEFVLVDAASRVAYLESNKVDMIMANFTVTD 120 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 + + F G + + I S +L G I V GTT E + + Sbjct: 121 --DRKEKVDFANPYMKVSLGIVSPESAPIKSADELKGKKIIVAKGTTAET----FMTENY 174 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + +E+ EI A + R D D + + A D P V + + S+ +AP Sbjct: 175 PDVELVKYEQYSEIFQALKDGRGDGILSDNTEVIAWA--KDNPGFTVGVSTLGSQDTIAP 232 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 A+ +G+TE + E + ++N + + T V Sbjct: 233 AVAKGNTE--------LQEWINTELETLGKENFVHKAYEETLKSV 269 >gi|223040121|ref|ZP_03610401.1| acriflavine resistance protein [Campylobacter rectus RM3267] gi|222878598|gb|EEF13699.1| acriflavine resistance protein [Campylobacter rectus RM3267] Length = 278 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 103/267 (38%), Gaps = 15/267 (5%) Query: 1 MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K F + +F + L IKKRG+++ G+ + F V G Sbjct: 1 MKKLLFSFLAIFAAVFLMDQANVCAAETDALAKIKKRGYVRVGVFSDKPPFGYVDKEGKN 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +G+D+ F + ++ + D SK+++ + A R L S ++DI N T R + Sbjct: 61 QGYDIYFAKRIAKDLLGDESKVKFELVEAASRVEVLVSDKVDITLANFTKTPERTRV--V 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G + I SV +L G + V GTT + F ++ + + Sbjct: 119 DFALPYMKVSLGVVSPNGAVIKSVDELKGKKLIVNKGTTADAY----FTKNHPDIELVKY 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ E AA R A D + L+A + P V + + +APA+ + + Sbjct: 175 DQNTETFAALVDKRGTALAHDNALLFAWA--KENPGFTVGIEALGEIDVIAPAVKKRNKA 232 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQ 263 ++ ++ + KN + Sbjct: 233 LLEWLN---NEIIELGKENFFHKNYDA 256 >gi|51891628|ref|YP_074319.1| amino acid ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] gi|51855317|dbj|BAD39475.1| amino acid ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 275 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 8/230 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + I+ G L+ G+ + F +G ++D R ++ IF D SK+Q+ +NA Sbjct: 44 VQKIRDAGVLRVGVKEDVPKFGYFDPAKNAHEGLEIDLARRIAKEIFGDESKVQFTGVNA 103 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 K R AL + +ID++ T R+ F + D GF++ GI S L G Sbjct: 104 KTRGPALDNGEIDLVIATFTITEERKK--SWNFSDPYFTDYVGFLVLADSGIQSWKDLDG 161 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 I V +T L + + +K + F EI AA + R DA++ D S L+ Sbjct: 162 KVIGVAQSASTRAALTEQAEKDGIKVEFMEFATYPEIKAALDSRRIDAFSVDQSILWGY- 220 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + ++V+LPD + A +TE V+ M + EL Sbjct: 221 ----KDDKNVMLPDKFAPQEYGIATKLSNTELAEFVNNILKGMKESGELD 266 >gi|107021746|ref|YP_620073.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116688692|ref|YP_834315.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105891935|gb|ABF75100.1| L-aspartate-binding protein / L-glutamate-binding protein [Burkholderia cenocepacia AU 1054] gi|116646781|gb|ABK07422.1| L-aspartate-binding protein / L-glutamate-binding protein [Burkholderia cenocepacia HI2424] Length = 297 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 93/258 (36%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + L +++ L IK G + G + F+ N G+ Sbjct: 1 MKYHKAVLMAAALCAFASGAYAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY 60 Query: 60 DVD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + A+ + +++ +P+ ++ R +Q+ +DI +T L R Sbjct: 61 SREFQLKIVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLER--QQQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 AF + G + K G+ + L G ++ AGTT+E L + + I Sbjct: 119 AAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R A+ D + L + +P E VI+ S+ + +GD Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDA 238 Query: 236 EWYNIVSWTHYAMVTAEE 253 ++ +V + + E Sbjct: 239 DFKKVVDDAISQVEKSGE 256 >gi|56697500|ref|YP_167868.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3] gi|56679237|gb|AAV95903.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3] Length = 287 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 98/256 (38%), Gaps = 5/256 (1%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + L + + L I G + G V FA + N G+ +D Sbjct: 5 KPILAGAVALGLALPVAAQDRTGTLAKIDASGEIVIGHRESSVPFAYLDENQKPVGYSID 64 Query: 63 FCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 C + A+ I+Y+P+N K R + + ID+ +T L R + + Sbjct: 65 LCMKIVEAVSAELGKELSIKYVPVNPKTRIALMANGTIDLECGSTTNNLTR--QEQVEYL 122 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 P T+ G ++ K GISSV+ L G ++ + GTT E + + + + Sbjct: 123 PTTFITGTKLMVRKGSGISSVADLDGKAVALAQGTTNERAVKAAIETMGLDVKVLPVRDH 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E + R D Y D L+ L + P ++ D +S P A + + D+ + Sbjct: 183 AEGMLSLETDRVDVYATDHILLFGLIAKSKTPDAFEVVGDFLSFDPYALMVRRDDSAFEL 242 Query: 240 IVSWTHYAMVTAEELG 255 + A+ + E+ Sbjct: 243 VGKKALAAVFRSGEID 258 >gi|20807013|ref|NP_622184.1| ABC-type amino acid transport system, periplasmic component [Thermoanaerobacter tengcongensis MB4] gi|20515498|gb|AAM23788.1| ABC-type amino acid transport system, periplasmic component [Thermoanaerobacter tengcongensis MB4] Length = 260 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 98/260 (37%), Gaps = 17/260 (6%) Query: 2 YKDFFVSILCLIILFF--TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG---DW 56 K F++ + L F + + + + IK++G + G + F K G + Sbjct: 3 KKSLFLAFAVVFALAFMLSGCGSKFNTVDQIKQKGVIVMGTSADFPPFEFHKVEGGKDEI 62 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D A++ + ++ ++ K ALQ+ ++D++ T R+ + Sbjct: 63 VGFDIDIANAIAKKLGVK---LEIKDMDFKGLIPALQAGRVDMVIAGMTPTAERKK--SV 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + Y Q ++ IS L +I VQ GTT+E Sbjct: 118 DFSDLYYDSRQVVVVKNDSPISKFDDLKVKTIAVQIGTTSEEAAKKI-----PNVKLKQL 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDT 235 RV + + RCDA + + A + + + +I + A A+ +G+ Sbjct: 173 NRVSDEFMDLQNGRCDAIVVEDTVAKAYLKEYKD-MKILYMDEINNVENGSAVAVAKGNK 231 Query: 236 EWYNIVSWTHYAMVTAEELG 255 ++V+ + + E Sbjct: 232 SLLDVVNEVIKELKQSGEYD 251 >gi|254518100|ref|ZP_05130156.1| amino-acid ABC transporter periplasmic solute-binding protein [Clostridium sp. 7_2_43FAA] gi|226911849|gb|EEH97050.1| amino-acid ABC transporter periplasmic solute-binding protein [Clostridium sp. 7_2_43FAA] Length = 288 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 58/254 (22%), Positives = 101/254 (39%), Gaps = 13/254 (5%) Query: 1 MYK---DFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K ++ L +L S + IKK G ++ G+ + F V G Sbjct: 14 MKKFLSLILTLVIALGVLVGCGSKAEESKASIDVIKKAGKIRIGVFSDKPPFGFVDEKGA 73 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G+DV + L+ + D +K++++ + A R LQS ++DI+ N T R+ Sbjct: 74 NQGYDVYLAKRLAKDLLGDENKVEFVLVEAANRVEYLQSNKVDIILANFTVTPERKE--K 131 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + I SV L G + V GTT E F + + Sbjct: 132 VDFATPYMKVSLGVVSPDGAPIKSVDDLKGKKLLVNKGTTAESY----FTKNYPDIELVK 187 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 FE+ E AA + R A D + L+A + + + + +APA+ +GD Sbjct: 188 FEQNTETFAALKDGRGAALAHDNTLLFAWA--RENEGYDTYISSLGEEDAIAPAVKKGDA 245 Query: 236 EWYNIVSWTHYAMV 249 E ++ ++ Sbjct: 246 ELLEWLNKEVDTLI 259 >gi|332094327|gb|EGI99378.1| glutamate/aspartate periplasmic-binding protein [Shigella boydii 5216-82] Length = 302 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 88/241 (36%), Gaps = 6/241 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---- 74 + S L I K G + G V F+ G+ D+ A+ A+ Sbjct: 25 AAPVAGSTLDKIAKNGMIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 84 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +++ +P+ ++ R LQ+ D +T + R+ F + G + K Sbjct: 85 DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKG 142 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + L G ++ V +GTT+E+ L + M I + + + R A+ Sbjct: 143 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAF 202 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L + +P I+ S+ + + D ++ ++ T M T+ E Sbjct: 203 MMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQMQTSGEA 262 Query: 255 G 255 Sbjct: 263 E 263 >gi|261377618|ref|ZP_05982191.1| CjaA protein [Neisseria cinerea ATCC 14685] gi|269146371|gb|EEZ72789.1| CjaA protein [Neisseria cinerea ATCC 14685] Length = 284 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 17/256 (6%) Query: 2 YKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 +K S + L S A+ + IK++G ++ G+ F V A Sbjct: 7 FKALLASAAIAVGLTACGGDSGDTQSSQSGGAATVASIKEKGVIRIGVFGDKPPFGYVDA 66 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 NG +GFDV+ + L+ + P K++++ A R ++S ++D++ N T R Sbjct: 67 NGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTKTPERAE 126 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F G + K K I+ ++QL ++ V GTT + +F + + Sbjct: 127 --AVDFADPYMKVALGVVSPKDKPITDIAQLKDQTLLVNKGTTADA----FFTKSHPEVK 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + F++ E A + R A D + L+A + P+ V + ++ +APA+ + Sbjct: 181 LLKFDQNTETFDALKDGRGVALAHDNALLWAWA--KENPNFEVAIGNLGPAEFIAPAVQK 238 Query: 233 GDTEWYNIVSWTHYAM 248 G+T+ N V+ AM Sbjct: 239 GNTDLLNWVNGEIAAM 254 >gi|225025468|ref|ZP_03714660.1| hypothetical protein EIKCOROL_02366 [Eikenella corrodens ATCC 23834] gi|224941752|gb|EEG22961.1| hypothetical protein EIKCOROL_02366 [Eikenella corrodens ATCC 23834] Length = 297 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 57/224 (25%), Positives = 103/224 (45%), Gaps = 8/224 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK+RG ++ G+ F V ANG +GFDV+ + L++ + P K++++ A Sbjct: 56 LAKIKERGVIRIGVFGDKPPFGYVDANGKSQGFDVEIAKYLANDLLGSPDKVEFVLTEAA 115 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R ++S ++D++ N T R + F G + K I+ +SQL G Sbjct: 116 NRVEYVRSGKVDLILANFTQTPERAEV--VDFASPYMNVALGVVSPKGAPITDLSQLEGK 173 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++ V GTT + F ++ + + F++ E A + R A D + L+A Sbjct: 174 TLLVNKGTTADAY----FTKNHPNINLLKFDQNTETFDALKDGRGVALAHDNALLWAWA- 228 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + P+ V++ +I +APA+ +GD N V+ A+ Sbjct: 229 -KENPNFEVVIGNIGPAEHIAPAVRKGDQSLLNWVNQEIAAIKQ 271 >gi|260555372|ref|ZP_05827593.1| ArtI protein [Acinetobacter baumannii ATCC 19606] gi|260411914|gb|EEX05211.1| ArtI protein [Acinetobacter baumannii ATCC 19606] Length = 286 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 63/269 (23%), Positives = 114/269 (42%), Gaps = 22/269 (8%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46 M+K +S + + T+ S S L +KK G L+ + Sbjct: 1 MFKRNSIKILSSFAVAGVLLTACSKTPSTEQASNAQEDHSLEQVKKNGVLRVAVFADDPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V + G+ +GFDV + ++ + D K++++ A R L+S + D++ Sbjct: 61 FGYVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + F G + K K I+ ++QL G ++ V GT+++ F Sbjct: 121 TPERKEV--VDFAEPYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDTY----FTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 H K + + FER + A R DA + D + YAL PS + I + + Sbjct: 175 HYPKVNLLKFERNSDAFKALTDGRGDAISQDST--YALAWAAKNPSYVAGIQSIGDQEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 APA+ +G+T+ N ++ + T+ E+ Sbjct: 233 APAVKKGNTQLLNWLNTEIKQLRTSGEIK 261 >gi|253990626|ref|YP_003041982.1| glutamate and aspartate transporter subunit [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782076|emb|CAQ85240.1| glutamate/aspartate transport system permease protein glti [Photorhabdus asymbiotica] Length = 313 Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 92/250 (36%), Gaps = 7/250 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M V + L+ + + + L IK G + G V FA + G+ Sbjct: 17 MRMRNLVLTMMLLGVAGAAQAEELTGTLKKIKDDGVIIVGHRESSVPFAYYDNHQKVVGY 76 Query: 60 DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 D+ + A+ +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 77 SQDYSNLIVEAVKKKLDMPNLQVKLIPVTSQNRIPLLQNGTYDFECGSTSNNLERQK--Q 134 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + + K GI L+G ++ V AGTT+E+ L NMK I Sbjct: 135 VTFSNTIFIVNTRLLTKKGSGIKDFPDLAGKNVVVSAGTTSEILLNKLNDEKNMKMRIIS 194 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R A+ D + L + +P + I+ S+ + D Sbjct: 195 AKDHGDSFRTLESGRAIAFMVDDALLAGERAKAKKPDQWEIVGKPQSREAYGCISRKDDL 254 Query: 236 EWYNIVSWTH 245 ++ ++ T Sbjct: 255 QFKKLIDETI 264 >gi|78062134|ref|YP_372042.1| extracellular solute-binding protein [Burkholderia sp. 383] gi|77970019|gb|ABB11398.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 298 Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 84/251 (33%), Gaps = 8/251 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + L + A L IK G + GI V F+ G Sbjct: 1 MDRRLRWLAVALSCALAGTAHAQALTGTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIG 60 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + + D ++ +P+ ++ R LQ+ ID +T TL R+ Sbjct: 61 YSRDIAARIIDQLKTDLNAPNLAVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + G F K G+ + L+G ++ AGT+ E L + M I Sbjct: 121 A--FSNSIFLYGIRFSTRKDSGVKDFADLAGKTVATTAGTSDERLLRKLNEEKAMNMTII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D LY + P + + + A + + D Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVTGTPLVHENYACMMRRDD 238 Query: 235 TEWYNIVSWTH 245 + ++V Sbjct: 239 PAFKHVVDGVI 249 >gi|168764668|ref|ZP_02789675.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4501] gi|217324409|ref|ZP_03440493.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. TW14588] gi|189365371|gb|EDU83787.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4501] gi|217320630|gb|EEC29054.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. TW14588] Length = 302 Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ F + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGDDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 208 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263 >gi|167628301|ref|YP_001678800.1| glutamine abc transporter, glutamine-binding protein [Heliobacterium modesticaldum Ice1] gi|167591041|gb|ABZ82789.1| glutamine abc transporter, glutamine-binding protein [Heliobacterium modesticaldum Ice1] Length = 282 Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 106/269 (39%), Gaps = 32/269 (11%) Query: 1 MYKDFFVSIL-----CLIILFFTSFSTNASI-----------------LGDIKKRGFLKC 38 M+K + I L+ +A + IK RG+L Sbjct: 1 MFKKWTKGIALCCTAALLGTLAVGCGGSAPTGGEKKAAENQTQTSGDYIQTIKNRGYLIA 60 Query: 39 GINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 G+ + F ++K+ +GF+VD + L+ +F D SK++ + ++ R LQ+ QI Sbjct: 61 GVKNDVPLFGQLKSGADKPEGFEVDIMKELAKKLFGDESKVKLEKVESQTRIPMLQNGQI 120 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 DI++ T T R+ + F + + GQ ++ K I SV+ L G ++ G+T+ Sbjct: 121 DIVAGTTTITEERKK--QIDFSDVYFKAGQSLLVKKGSPIKSVTDLKGKTVSTVRGSTSA 178 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 + + + + E A + R DA T D S L + ++ Sbjct: 179 KNIREKAPDAKVD----EYATYTEAFQALKLGRSDAMTTDNSILMGFANEDPN---FELV 231 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + ++ P +G EW N V+ Sbjct: 232 GGLFTEEPYGFGFQKGHPEWVNYVNDFLK 260 >gi|121606347|ref|YP_983676.1| extracellular solute-binding protein [Polaromonas naphthalenivorans CJ2] gi|120595316|gb|ABM38755.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 299 Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 109/258 (42%), Gaps = 6/258 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M L L+ F+ + + +K G + G+ + +G + G+ Sbjct: 1 MKFKIATLTLALLA-SGAVFAQASDTVAKVKASGVVTMGVRDSSGALSYTLGDGKYVGYH 59 Query: 61 VDFCRALSSAIF---DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 V+ C+ + + + +++Y P+ ++ R +Q+ +DI +T R + Sbjct: 60 VEICQRILANLEKAAGRKLEVKYQPVTSQNRIPLVQNGTVDIECGSTTNNATRAKDVA-- 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F T+ + + GI+SV+QL+G ++ GTT+ TL +A N+ ++ I + Sbjct: 118 FLHTTFVEEVRIAVKTSSGITSVAQLNGKNVATTTGTTSVQTLRRNERATNVNFNEIFGK 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R DA+ D S L + P++ I+ +++S P+A I + D Sbjct: 178 DHSDSFLLLESGRADAFVMDGSILAGNIASAKNPADFKIVGEVLSVEPIAIMIRKDDAGL 237 Query: 238 YNIVSWTHYAMVTAEELG 255 I T ++ + EL Sbjct: 238 KKIGDDTINGLIKSGELA 255 >gi|330823278|ref|YP_004386581.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans K601] gi|329308650|gb|AEB83065.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus denitrificans K601] Length = 299 Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 101/253 (39%), Gaps = 7/253 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + ++ ++ + L IK G + G+ A +G + GF Sbjct: 1 MKKHLLAAAITVLA-AGSAIAQANDTLAKIKSSGAITLGVRESSGALAYTLGDGKYVGFH 59 Query: 61 VDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + ++ + +I+Y P+ ++ R + + +D+ +T L R+ + Sbjct: 60 TEMAERVARDLQKKLGLSKLEIKYQPVTSQNRIPLVVNGTVDLECGSTTNNLARQKDVA- 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F TY + + GI+ + L+G +I GTT+ TL +A M + ++ Sbjct: 119 -FANTTYVEEVRIAVKANSGINDIKDLNGKTIVTTTGTTSVQTLRKNKRAEGMNFREVMG 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R DA+ D S L + P++ I+ + +S P+A + + D Sbjct: 178 KDHADSFLMLETGRADAFIMDGSILAGNISKSKSPNDFKIVGEALSVEPIACMLRKDDPA 237 Query: 237 WYNIVSWTHYAMV 249 + V + A + Sbjct: 238 FKKAVDESIVAQI 250 >gi|329906185|ref|ZP_08274376.1| Glutamate Aspartate periplasmic binding protein precursor gltI [Oxalobacteraceae bacterium IMCC9480] gi|327547318|gb|EGF32154.1| Glutamate Aspartate periplasmic binding protein precursor gltI [Oxalobacteraceae bacterium IMCC9480] Length = 313 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 93/250 (37%), Gaps = 7/250 (2%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + ++ ++ + + L IK G + G+ + F+ + ++G+ Sbjct: 1 MKLAKMMLVLIGSGLIASAAQAQETGTLKKIKDSGQITLGVRDSSIPFSYLDDKQSYQGY 60 Query: 60 DVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +D C + + ++ P+ + R + + +D++ + + R+ Sbjct: 61 SIDICMKIVTSIQKELGMTSLNVKLNPVTSATRIPLMANGTVDLVCGSATNNIERQK--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 ++F P T+ + K I ++ + G S+ +GT+ L N+ + + Sbjct: 119 VSFAPTTFVTANRLLAKKSSNIKTLDDMKGKSLVSTSGTSNLKQLVQLNGDRNLGMNVMT 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D L +L ++ P+++ I + +S P + + D Sbjct: 179 AKDHAEAFLMVETGRAVAFGMDDILLASLAASSKSPADYSITTEALSTEPYGIMLRREDP 238 Query: 236 EWYNIVSWTH 245 + V Sbjct: 239 AFKKSVDTAV 248 >gi|291085702|ref|ZP_06353786.2| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Citrobacter youngae ATCC 29220] gi|291070188|gb|EFE08297.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Citrobacter youngae ATCC 29220] Length = 317 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 95/260 (36%), Gaps = 12/260 (4%) Query: 3 KDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + + S L I K G + G V F+ Sbjct: 19 RKLATAMLVMGMSAGLAHAEDAAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 78 Query: 58 GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +++ +P+ ++ R LQ+ D +T + R+ Sbjct: 79 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQ 138 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + G + K I + L G ++ V +GTT+E+ L + M Sbjct: 139 AA--FSDTIFVVGTRLLAKKGGDIKDFADLKGKAVVVTSGTTSEVLLHKLNEEQKMDMRI 196 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 197 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKD 256 Query: 234 DTEWYNIVSWTH-YAMVTAE 252 D E+ ++ T A + E Sbjct: 257 DPEFKKLMDDTIANAQTSGE 276 >gi|253575034|ref|ZP_04852373.1| extracellular solute-binding protein, family 3 [Paenibacillus sp. oral taxon 786 str. D14] gi|251845490|gb|EES73499.1| extracellular solute-binding protein, family 3 [Paenibacillus sp. oral taxon 786 str. D14] Length = 284 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 109/280 (38%), Gaps = 34/280 (12%) Query: 1 MYKDF-FVSILCLIILFFTSFSTN----------------------ASILGDIKKRGFLK 37 M K + +SI + L + + L IK RG L Sbjct: 1 MKKRWRLISIAVVCALTVLAGCASNGAGGNTAGNGGNAAPATGESGTGALAKIKDRGKLV 60 Query: 38 CGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 G+ F + G+ +GFD+D + ++ I D + ++ + +K R L + + Sbjct: 61 VGVKYDTKLFGLKDPSTGNVEGFDIDISKTIAKHILGDENALELKEVTSKTRIPMLNNGE 120 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ-AGTT 155 ID++ T R+ + F + + GQ ++ K I+ + L+ S + G+T Sbjct: 121 IDMIVATMTITEERKK--EVDFSDVYFQAGQSLLVKKGSPITGIESLTADSTVLGSKGST 178 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 + + + + + F+ ++ A +A + DA T D + LY + + + Sbjct: 179 SVKNIREKVE----GIKVLEFDNYQDAFNALKAGQGDALTTDDAILYGMAAQDPN---YE 231 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 ++ + P A+ +G+++ ++ T + + E Sbjct: 232 VVGKPFTDEPYGIAVQKGNSDIVQAINDTLKELHDSGEYD 271 >gi|315612724|ref|ZP_07887635.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] gi|315314834|gb|EFU62875.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] Length = 273 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 103/251 (41%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 10 MKKKFFLSALLISLFSLAAAKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 69 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 70 GIETDLAKMIADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 124 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 125 FTSPYYTDASGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 184 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 185 SYPELITSLHAHRIDAFSVDRSILSGYISKRT-----ELLDDSFKPSDYGIVTKKSNTEL 239 Query: 238 YNIVSWTHYAM 248 + + Sbjct: 240 NDYLDTLVTKW 250 >gi|295700116|ref|YP_003608009.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295439329|gb|ADG18498.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 300 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 96/253 (37%), Gaps = 7/253 (2%) Query: 6 FVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 ++ + +F+ +A S L I++ G + G V F+ V AN D GF D C Sbjct: 9 VAVLVAATSVSPGAFAQDATSTLAKIQQSGVIAIGHRETSVPFSYVDANNDVIGFSQDLC 68 Query: 65 RALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + A+ ++++P+ ++ R +Q+ +D+ T R+ + F Sbjct: 69 NKIIDAVKAKTKHPDLKVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARQS--QVTFGD 126 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + K GI L+G ++ GTT+E L + M I + Sbjct: 127 TFFVATTRLLTRKDSGIKDFPDLAGKTVVTNQGTTSERILRKMNEDKKMNMQIISAKDYG 186 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + R AY D L + +PS+ +I S + + D E+ + Sbjct: 187 EGRLTLESGRAVAYMMDDVLLAGTRTLTAKPSDWIITGTPQSSEAYGFMLRRDDPEFRKL 246 Query: 241 VSWTHYAMVTAEE 253 V T ++ E Sbjct: 247 VDDTLEQVMKGPE 259 >gi|331672187|ref|ZP_08372979.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA280] gi|331070654|gb|EGI42017.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA280] Length = 327 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ F + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFHTLESGRAVAFMMDDA 232 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 233 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 288 >gi|313667604|ref|YP_004047888.1| ABC transporter [Neisseria lactamica ST-640] gi|313005066|emb|CBN86498.1| putative ABC transporter [Neisseria lactamica 020-06] Length = 284 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 22/262 (8%) Query: 1 MY-----KDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVG 46 M K S + L S+ A+ + IK++G ++ G+ Sbjct: 1 MKLNTKLKALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V ANG +GFDV+ + L+ + P K++++ A R ++S ++D++ N Sbjct: 61 FGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTK 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R + F G + K K I+ V+QL ++ V GTT + +F Sbjct: 121 TPERAE--AVDFADPYMKVALGVVSPKDKPITDVAQLKDQTLLVNKGTTADA----FFTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + + F++ E A + R A D + L+A + P+ V + ++ + Sbjct: 175 SHPEVKLLKFDQNTETFDALKDGRGVALAHDNALLWAWA--KENPNFEVAIGNLGPAEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAM 248 APA+ +G+ + N V+ AM Sbjct: 233 APAVQKGNADLLNWVNGEIAAM 254 >gi|241759167|ref|ZP_04757275.1| antigenic protein [Neisseria flavescens SK114] gi|241320586|gb|EER56863.1| antigenic protein [Neisseria flavescens SK114] Length = 284 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 110/256 (42%), Gaps = 17/256 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTN---------ASILGDIKKRGFLKCGINTGLVGFAEVKA 52 +K S + L S+ A+ + IK++G ++ G+ F V A Sbjct: 7 FKALLASAAIAVGLTACGGSSGDAQSSQSSGAATVASIKEKGVIRIGVFGDKPPFGYVDA 66 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 NG +GFDV+ + L+ + P K++++ A R ++S ++D++ N T R Sbjct: 67 NGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTKTPERAE 126 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F G + K K I+ V+QL ++ V GTT + +F + + Sbjct: 127 --AVDFADPYMKVALGVVSPKGKPITDVAQLKDQTLLVNKGTTADA----FFTKSHPEVK 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + F++ E A + R A D + L+A + P V + ++ +APA+ + Sbjct: 181 LLKFDQNTETFDALKDGRGAALAHDNALLWAWA--KENPDFEVAIGNLGPAEFIAPAVQK 238 Query: 233 GDTEWYNIVSWTHYAM 248 G+ + N V+ AM Sbjct: 239 GNADLLNWVNSEIAAM 254 >gi|319638911|ref|ZP_07993669.1| ABC transporter [Neisseria mucosa C102] gi|317399815|gb|EFV80478.1| ABC transporter [Neisseria mucosa C102] Length = 284 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 17/256 (6%) Query: 2 YKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 +K S + L S+ A+ + IK++G ++ G+ F V A Sbjct: 7 FKALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDA 66 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 NG +GFDV+ + L+ + P K++++ A R ++S ++D++ N T R Sbjct: 67 NGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTKTPERAE 126 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F G + K K I+ V+QL ++ V GTT + +F + + Sbjct: 127 --AVDFADPYMKVALGVVSSKDKPITDVAQLKDQTLLVNKGTTADA----FFTKSHPEVK 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + F++ E A + R A D + L+A + P+ V + ++ +APA+ + Sbjct: 181 LLKFDQNTETFDALKDGRGVALAHDNALLWAWA--KENPNFEVAIGNLGPAEFIAPAVQK 238 Query: 233 GDTEWYNIVSWTHYAM 248 G+T+ N V+ AM Sbjct: 239 GNTDLLNWVNGEIAAM 254 >gi|282599606|ref|ZP_05971190.2| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Providencia rustigianii DSM 4541] gi|282568694|gb|EFB74229.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Providencia rustigianii DSM 4541] Length = 310 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 96/253 (37%), Gaps = 15/253 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K ++ ++L + + A L IK G + G V F+ + Sbjct: 16 MSK-----LVLTMMLLGATCAVQAEELNGTLKKIKDNGVIVVGHRESSVPFSYYDNSQKV 70 Query: 57 KGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ D+ + A+ +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 71 VGYSQDYSNQIVDAVKKKLNMPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQK 130 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F + G + K GI + L+G ++ V +GTT+E+ L NMK Sbjct: 131 QAA--FSNTIFVVGTRLLAKKDAGIKDFADLAGKNVVVTSGTTSEIILNQLNDQKNMKMR 188 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + + + R A+ D + L + +P+ I+ ++ + + Sbjct: 189 IISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKQPAIWEIVGKPQTQEAYGCMLRK 248 Query: 233 GDTEWYNIVSWTH 245 D ++ ++ T Sbjct: 249 DDPQFKALIDETI 261 >gi|225076166|ref|ZP_03719365.1| hypothetical protein NEIFLAOT_01198 [Neisseria flavescens NRL30031/H210] gi|224952509|gb|EEG33718.1| hypothetical protein NEIFLAOT_01198 [Neisseria flavescens NRL30031/H210] Length = 287 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 25/265 (9%) Query: 1 MY---KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTG 43 M K + I + T+ S+ A+ + IK++G ++ G+ Sbjct: 1 MKLNAKFKALLAFAAIAVGLTACGGGSSGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGD 60 Query: 44 LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F V ANG +GFDV+ + L+ + P K++++ A R ++S ++D++ N Sbjct: 61 KPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILAN 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R + F G + K K I+ V+QL ++ V GTT + + Sbjct: 121 FTKTPERAE--AVDFADPYMKVALGVVSPKDKPITDVAQLKDQTLLVNKGTTADA----F 174 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 F + + + F++ E A + R A D + L+A + P+ V + ++ Sbjct: 175 FTKSHPEVKLLKFDQNTETFDALKDGRGVALAHDNALLWAWA--KENPNFEVAIGNLGPA 232 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAM 248 +APA+ +G+T+ N V+ AM Sbjct: 233 EFIAPAVQKGNTDLLNWVNGEIAAM 257 >gi|331266846|ref|YP_004326476.1| ABC transporter, substrate-binding protein,polar amino acid transport system; glutamine transport,putative [Streptococcus oralis Uo5] gi|326683518|emb|CBZ01136.1| ABC transporter, substrate-binding protein,polar amino acid transport system; glutamine transport,putative [Streptococcus oralis Uo5] Length = 264 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 103/251 (41%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLAAAKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMIADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 116 FTSPYYTDASGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISKRT-----ELLEDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAM 248 + + Sbjct: 231 NDYLDTLVTKW 241 >gi|255528434|ref|ZP_05395230.1| extracellular solute-binding protein family 3 [Clostridium carboxidivorans P7] gi|296188321|ref|ZP_06856713.1| bacterial extracellular solute-binding protein, family 3 [Clostridium carboxidivorans P7] gi|255507868|gb|EET84312.1| extracellular solute-binding protein family 3 [Clostridium carboxidivorans P7] gi|296047447|gb|EFG86889.1| bacterial extracellular solute-binding protein, family 3 [Clostridium carboxidivorans P7] Length = 275 Score = 156 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 83/256 (32%), Gaps = 20/256 (7%) Query: 2 YKDFFVSILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51 K + + + + + + + L IKK G LK G+ Sbjct: 5 KKAVVLMLSVIFVAALFAGCGKSSSSQSQAQGGNSLEKIKKAGVLKVGLEDSFPPMEFRD 64 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + KGFD+D + + ++ + LAL+S + D + T R+ Sbjct: 65 KQNELKGFDIDMANEIGKKLGVKTE---FVCTDFNGIILALKSGKFDTIISGLSITDERK 121 Query: 112 ISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 ++F + Q ++ + + L G ++ V GTT+E Sbjct: 122 K--EISFSDPYVMNSQIIVVKNGNTAVKGANDLKGKTVGVGLGTTSESVATKMQGLK--- 176 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 +++ E R DA D D+ ++ +L + ++K P+ Sbjct: 177 -EVKKYDKTTEELQDLLIGRIDAVIVDEPVGRYYISEADKKGKYEVLSEKLTKEPMGIGF 235 Query: 231 IQGDTEWYNIVSWTHY 246 D E + V Sbjct: 236 KNEDKELKDAVQKAIN 251 >gi|322374749|ref|ZP_08049263.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C300] gi|321280249|gb|EFX57288.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C300] Length = 293 Score = 156 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 103/251 (41%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 30 MKKKFFLSALLISLFGLAATKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 89 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 90 GIETDLAKMIADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 144 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 145 FTSPYYTDASGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 204 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 205 SYPELITSLHAHRIDAFSVDRSILSGYISKRT-----ELLNDSFKPSDYGIVTKKSNTEL 259 Query: 238 YNIVSWTHYAM 248 + + Sbjct: 260 NDYLDNLVTKW 270 >gi|312135672|ref|YP_004003010.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor owensensis OL] gi|311775723|gb|ADQ05210.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor owensensis OL] Length = 266 Score = 156 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 91/250 (36%), Gaps = 12/250 (4%) Query: 1 MYKDFFVSILCLIIL--FFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 MYK +L + + + S+N L IKK G++ N + Sbjct: 1 MYKKVIALVLLISLFIPLLSGCSSNNQDMTTLEKIKKTKEFAVGMDNTFPPMEFADDNNN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD ++ + +K++ + ++ AL+SK+ D + T R+ + Sbjct: 61 AVGFDVDLANEIAKKLG---AKLKIVTVDWSGIQSALKSKKFDAIISCFSITDERKKAFN 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 LA + I S L G I VQA TT + + K N + Sbjct: 118 LAGPYLYIRQVIAV-KRGDNSIKSFEDLKGIKIGVQANTTGDSAVQKM-KFINYEKDVTR 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +ER+ + R A D + A P + I P + K P+ A+ + D Sbjct: 176 YERITDAFNDLDIGRIKAVVIDS--VVAYYYKKQNPEKFDIAPAELEKEPVGIALRKEDK 233 Query: 236 EWYNIVSWTH 245 E YN + Sbjct: 234 ELYNEIQKIL 243 >gi|312960169|ref|ZP_07774681.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] gi|311285663|gb|EFQ64232.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] Length = 305 Score = 156 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 87/254 (34%), Gaps = 7/254 (2%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDF-- 63 V++ ++ + L IK G + G + F+ + +G G+ D Sbjct: 10 VTLTAALMSIPLMAAEPTGTLEKIKTSGTITLGHRDSSIPFSYIADGSGQPVGYSHDIQL 69 Query: 64 --CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 A+ + ++Y + ++ R +Q+ +D+ +T T R + F Sbjct: 70 KIVEAIKQELDIPNLNVRYNLVTSQTRIPLVQNGTVDLECGSTTNTAERAR--QVDFSVG 127 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + ++ K L G ++ AG+T E L M + I + + E Sbjct: 128 IFEASTRLLVRKNSAYKDFQDLDGKNVVTTAGSTAERMLKVMNAEKKMNMNVISAKDIGE 187 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + R A+ D + L P + V+ S + +GD IV Sbjct: 188 SYQMLESGRAIAFMQDDALLAGEMAKAKNPEDWVVTGTPQSNEIYGCTMRRGDPALKKIV 247 Query: 242 SWTHYAMVTAEELG 255 + ++ + E+ Sbjct: 248 DDSIKSLFVSGEIN 261 >gi|323706490|ref|ZP_08118050.1| extracellular solute-binding protein family 3 [Thermoanaerobacterium xylanolyticum LX-11] gi|323534152|gb|EGB23943.1| extracellular solute-binding protein family 3 [Thermoanaerobacterium xylanolyticum LX-11] Length = 258 Score = 156 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 98/260 (37%), Gaps = 16/260 (6%) Query: 1 MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K +S++ + I+ S + S L +KK G + G + F V Sbjct: 1 MKKRLIISLILVTIMSIALSGCSKQSTLSRVKKSGVIVMGTSADFPPFEFHKVVNGKDTI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD A++ + ++ ++ ALQS QID+ + T R+ + Sbjct: 61 MGFDVDLANAIAKKLGVK---LEIKDMDFTGLIPALQSGQIDMAIAGMNATPERKK--NV 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y Q ++ I++++ L G ++ VQ GTT+ D Sbjct: 116 DFSDEYYNSEQVLVVKNSSNINNLNDLKGKTVAVQLGTTS-----DDAAKKIKGIDIKEL 170 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDT 235 R+ + + R DA + + A + + + +I P + A+ +G+ Sbjct: 171 NRLGDAFLSLENGRVDAILMESTIADAYLKEYKD-MKMLHIKEINEAVPGYSVAVAKGNQ 229 Query: 236 EWYNIVSWTHYAMVTAEELG 255 + N ++ + + E Sbjct: 230 DLVNQINSVIKDLKDSGEYE 249 >gi|270263718|ref|ZP_06191987.1| glutamate/aspartate periplasmic-binding protein, precursor [Serratia odorifera 4Rx13] gi|270042602|gb|EFA15697.1| glutamate/aspartate periplasmic-binding protein, precursor [Serratia odorifera 4Rx13] Length = 276 Score = 156 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 85/244 (34%), Gaps = 6/244 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L + L IK G + G V F+ G+ Sbjct: 3 MRKLALSLLLIGMAGNVAHAEELTGTLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYS 62 Query: 61 VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 D+ + A+ +++ LP+ ++ R LQ+ D +T + R+ Sbjct: 63 QDYSNQIVDAVKKKLNMPDLQVKMLPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA- 121 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G ++ K + L+G + V +GTT+E+ L + M I Sbjct: 122 -FSDTIFVVGTRLLVKKGSDVKDFKDLAGKPVVVTSGTTSEVLLNKLNDSGKMNMRIISA 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D + L + +P + IL SK + + D E Sbjct: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDQWEILGTPQSKEAYGCMLRKDDAE 240 Query: 237 WYNI 240 + N Sbjct: 241 FKNW 244 >gi|300996649|ref|ZP_07181507.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 200-1] gi|300304478|gb|EFJ58998.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 200-1] Length = 325 Score = 156 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 53 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 112 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T R+ F + G + K I Sbjct: 113 LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 170 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 171 FADLKGKAVVVTSGTTSEVFLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 230 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 231 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 286 >gi|159794822|pdb|2IA4|B Chain B, Crystal Structure Of Novel Amino Acid Binding Protein From Shigella Flexneri Length = 280 Score = 156 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 86/241 (35%), Gaps = 6/241 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---- 74 + S L I K G + G V F+ G+ D+ A+ A+ Sbjct: 1 AAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKP 60 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +++ +P+ ++ R LQ+ D +T + R+ F + G + K Sbjct: 61 DLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKG 118 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + L G ++ V +GTT+E+ L + I + + + R A+ Sbjct: 119 GDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKXNXRIISAKDHGDSFRTLESGRAVAF 178 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L + +P I+ S+ + + D ++ + T + T+ E Sbjct: 179 XXDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCXLRKDDPQFKKLXDDTIAQVQTSGEA 238 Query: 255 G 255 Sbjct: 239 E 239 >gi|107104181|ref|ZP_01368099.1| hypothetical protein PaerPA_01005254 [Pseudomonas aeruginosa PACS2] gi|254244037|ref|ZP_04937359.1| hypothetical protein PA2G_04870 [Pseudomonas aeruginosa 2192] gi|126197415|gb|EAZ61478.1| hypothetical protein PA2G_04870 [Pseudomonas aeruginosa 2192] Length = 299 Score = 156 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 95/235 (40%), Gaps = 7/235 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAI----FDDPSKI 78 + L + G + G V F+ + +G G+ V+ + + K+ Sbjct: 26 SGTLKKVADNGTITLGYRDASVPFSYLGDNSGQPMGYSVELADKVVERLKSTLGKPELKV 85 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y + ++ R +Q+ +D+ +T T R+ + F + + K GI+ Sbjct: 86 KYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQVA--FSYGFIYVKGQLLTRKDSGIA 143 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L G ++ AGTT E L +Y H + + + + E ++ R A+ D Sbjct: 144 HFDDLKGKNVVTTAGTTNERYLKNYNAEHKLGMNVVSAKDHGEAFQMLQSGRAVAFYMDD 203 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + LY + +P + V++ + S+ + + + D ++ +V+ T + + E Sbjct: 204 ALLYGERAKARQPHDWVVVGEPQSREIYSCMVRKDDPQFLALVNETLAGLYRSGE 258 >gi|300817825|ref|ZP_07098039.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 107-1] gi|331651668|ref|ZP_08352687.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli M718] gi|300529522|gb|EFK50584.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 107-1] gi|324016061|gb|EGB85280.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 117-3] gi|331049946|gb|EGI22004.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli M718] Length = 327 Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ F + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 233 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 288 >gi|291281605|ref|YP_003498423.1| Glutamate/aspartate periplasmic binding protein [Escherichia coli O55:H7 str. CB9615] gi|290761478|gb|ADD55439.1| Glutamate/aspartate periplasmic binding protein [Escherichia coli O55:H7 str. CB9615] Length = 327 Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ F + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 233 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 288 >gi|281600010|gb|ADA72994.1| putative periplasmic binding transport protein [Shigella flexneri 2002017] Length = 327 Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ F + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 233 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 288 >gi|15800369|ref|NP_286381.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H7 EDL933] gi|15829948|ref|NP_308721.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H7 str. Sakai] gi|30062157|ref|NP_836328.1| glutamate and aspartate transporter subunit [Shigella flexneri 2a str. 2457T] gi|56479704|ref|NP_706556.2| glutamate and aspartate transporter subunit [Shigella flexneri 2a str. 301] gi|82775933|ref|YP_402280.1| glutamate and aspartate transporter subunit [Shigella dysenteriae Sd197] gi|110804696|ref|YP_688216.1| glutamate and aspartate transporter subunit [Shigella flexneri 5 str. 8401] gi|168752225|ref|ZP_02777247.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4113] gi|168758298|ref|ZP_02783305.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4401] gi|168767102|ref|ZP_02792109.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4486] gi|168777604|ref|ZP_02802611.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4196] gi|168779146|ref|ZP_02804153.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4076] gi|168786505|ref|ZP_02811512.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC869] gi|168802435|ref|ZP_02827442.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC508] gi|195939393|ref|ZP_03084775.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H7 str. EC4024] gi|208805792|ref|ZP_03248129.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208816032|ref|ZP_03257211.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208823216|ref|ZP_03263534.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209399444|ref|YP_002269290.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4115] gi|209917916|ref|YP_002292000.1| glutamate and aspartate transporter subunit [Escherichia coli SE11] gi|254791819|ref|YP_003076656.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H7 str. TW14359] gi|261224124|ref|ZP_05938405.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261257818|ref|ZP_05950351.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK966] gi|307312629|ref|ZP_07592261.1| extracellular solute-binding protein family 3 [Escherichia coli W] gi|309786318|ref|ZP_07680944.1| glutamate/aspartate periplasmic-binding protein [Shigella dysenteriae 1617] gi|12513562|gb|AAG54989.1|AE005244_7 putative periplasmic binding transport protein [Escherichia coli O157:H7 str. EDL933] gi|13360152|dbj|BAB34117.1| putative periplasmic binding transport protein [Escherichia coli O157:H7 str. Sakai] gi|30040402|gb|AAP16134.1| putative periplasmic binding transport protein [Shigella flexneri 2a str. 2457T] gi|56383255|gb|AAN42263.2| putative periplasmic binding transport protein [Shigella flexneri 2a str. 301] gi|81240081|gb|ABB60791.1| putative periplasmic binding transport protein [Shigella dysenteriae Sd197] gi|110614244|gb|ABF02911.1| putative periplasmic binding transport protein [Shigella flexneri 5 str. 8401] gi|187767185|gb|EDU31029.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4196] gi|188013872|gb|EDU51994.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4113] gi|189002825|gb|EDU71811.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4076] gi|189354868|gb|EDU73287.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4401] gi|189363489|gb|EDU81908.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4486] gi|189373621|gb|EDU92037.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC869] gi|189375561|gb|EDU93977.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC508] gi|208725593|gb|EDZ75194.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208732680|gb|EDZ81368.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208737409|gb|EDZ85093.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209160844|gb|ACI38277.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli O157:H7 str. EC4115] gi|209776908|gb|ACI86766.1| putative periplasmic binding transport protein [Escherichia coli] gi|209776910|gb|ACI86767.1| putative periplasmic binding transport protein [Escherichia coli] gi|209776912|gb|ACI86768.1| putative periplasmic binding transport protein [Escherichia coli] gi|209776914|gb|ACI86769.1| putative periplasmic binding transport protein [Escherichia coli] gi|209776916|gb|ACI86770.1| putative periplasmic binding transport protein [Escherichia coli] gi|209911175|dbj|BAG76249.1| glutamate/aspartate ABC transporter substrate binding component [Escherichia coli SE11] gi|254591219|gb|ACT70580.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|306907331|gb|EFN37836.1| extracellular solute-binding protein family 3 [Escherichia coli W] gi|308925712|gb|EFP71193.1| glutamate/aspartate periplasmic-binding protein [Shigella dysenteriae 1617] gi|313649699|gb|EFS14123.1| glutamate/aspartate periplasmic-binding protein [Shigella flexneri 2a str. 2457T] gi|315059910|gb|ADT74237.1| glutamate and aspartate transporter subunit [Escherichia coli W] gi|320193061|gb|EFW67701.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli O157:H7 str. EC1212] gi|320638106|gb|EFX07870.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H7 str. G5101] gi|320643510|gb|EFX12680.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H- str. 493-89] gi|320648845|gb|EFX17472.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H- str. H 2687] gi|320654429|gb|EFX22476.1| glutamate and aspartate transporter subunit [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660111|gb|EFX27641.1| glutamate and aspartate transporter subunit [Escherichia coli O55:H7 str. USDA 5905] gi|320664909|gb|EFX32044.1| glutamate and aspartate transporter subunit [Escherichia coli O157:H7 str. LSU-61] gi|323184990|gb|EFZ70357.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli 1357] gi|323379526|gb|ADX51794.1| extracellular solute-binding protein family 3 [Escherichia coli KO11] gi|326341405|gb|EGD65197.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli O157:H7 str. 1044] gi|326345815|gb|EGD69554.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli O157:H7 str. 1125] Length = 302 Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ F + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 208 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263 >gi|170020988|ref|YP_001725942.1| glutamate and aspartate transporter subunit [Escherichia coli ATCC 8739] gi|188495638|ref|ZP_03002908.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli 53638] gi|169755916|gb|ACA78615.1| extracellular solute-binding protein family 3 [Escherichia coli ATCC 8739] gi|188490837|gb|EDU65940.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli 53638] Length = 302 Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ F + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 208 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263 >gi|172059651|ref|YP_001807303.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171992168|gb|ACB63087.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 297 Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 92/258 (35%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + L + L IK G + G + F+ + G+ Sbjct: 1 MKYHKAVLMVAALCAFASGVHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQSQQVVGY 60 Query: 60 DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +F + A+ +++ +P+ ++ R +Q+ +DI +T R Sbjct: 61 SREFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTER--QQQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 AF + G + K G+ + L G ++ AGTT+E L + + I Sbjct: 119 AAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R A+ D + L + +P E VI+ S+ + +GD Sbjct: 179 AKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDA 238 Query: 236 EWYNIVSWTHYAMVTAEE 253 ++ +V + + E Sbjct: 239 DFKKVVDDAISQVEKSGE 256 >gi|315299197|gb|EFU58451.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 16-3] gi|332104148|gb|EGJ07494.1| glutamate/aspartate periplasmic binding protein [Shigella sp. D9] Length = 325 Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 53 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 112 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ F + G + K I Sbjct: 113 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 170 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 171 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 230 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 231 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 286 >gi|300931590|ref|ZP_07146902.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 187-1] gi|300460614|gb|EFK24107.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 187-1] Length = 327 Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ F + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 233 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 288 >gi|300927239|ref|ZP_07142971.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 182-1] gi|301329186|ref|ZP_07222177.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 78-1] gi|300416805|gb|EFK00116.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 182-1] gi|300844474|gb|EFK72234.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 78-1] Length = 327 Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ F + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 173 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 233 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 288 >gi|218699020|ref|YP_002406649.1| glutamate and aspartate transporter subunit [Escherichia coli IAI39] gi|256020607|ref|ZP_05434472.1| glutamate and aspartate transporter subunit [Shigella sp. D9] gi|293408781|ref|ZP_06652620.1| glutamate and aspartate transporter subunit [Escherichia coli B354] gi|218369006|emb|CAR16760.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI39] gi|284920455|emb|CBG33516.1| glutamate/aspartate ABC transporter, substrate-binding protein [Escherichia coli 042] gi|291471959|gb|EFF14442.1| glutamate and aspartate transporter subunit [Escherichia coli B354] gi|323191287|gb|EFZ76551.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli RN587/1] gi|323976362|gb|EGB71452.1| extracellular solute-binding protein 3 [Escherichia coli TW10509] Length = 302 Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ F + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263 >gi|218894181|ref|YP_002443050.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254238211|ref|ZP_04931534.1| hypothetical protein PACG_04337 [Pseudomonas aeruginosa C3719] gi|126170142|gb|EAZ55653.1| hypothetical protein PACG_04337 [Pseudomonas aeruginosa C3719] gi|218774409|emb|CAW30226.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 299 Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 95/235 (40%), Gaps = 7/235 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAI----FDDPSKI 78 + L + G + G V F+ + +G G+ V+ + + K+ Sbjct: 26 SGTLKKVADNGTITLGYRDASVPFSYLGDNSGQPMGYSVELADKVVERLKSTLGKPELKV 85 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y + ++ R +Q+ +D+ +T T R+ + F + + K GI+ Sbjct: 86 KYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQVA--FSYGFIYVKGQLLTRKDSGIA 143 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L G ++ AGTT E L +Y H + + + + E ++ R A+ D Sbjct: 144 HFDDLKGKNVVTTAGTTNERYLKNYNAEHKLGMNVVSAKDHGEAFQMLQSGRAVAFYMDD 203 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + LY + +P + V++ + S+ + + + D ++ +V+ T + + E Sbjct: 204 ALLYGERAKARQPHDWVVVGEPQSREIYSCMVRKDDPQFLALVNETLAGLYRSGE 258 >gi|194439879|ref|ZP_03071942.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli 101-1] gi|253774361|ref|YP_003037192.1| glutamate and aspartate transporter subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160734|ref|YP_003043842.1| glutamate and aspartate transporter subunit [Escherichia coli B str. REL606] gi|194421173|gb|EDX37197.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli 101-1] gi|242376428|emb|CAQ31130.1| gltI, subunit of GltIJKL glutamate ABC transporter [Escherichia coli BL21(DE3)] gi|253325405|gb|ACT30007.1| extracellular solute-binding protein family 3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972635|gb|ACT38306.1| glutamate and aspartate transporter subunit [Escherichia coli B str. REL606] gi|253976829|gb|ACT42499.1| glutamate and aspartate transporter subunit [Escherichia coli BL21(DE3)] gi|323963223|gb|EGB58791.1| extracellular solute-binding protein 3 [Escherichia coli H489] Length = 302 Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ F + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263 >gi|207725321|ref|YP_002255717.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|206590556|emb|CAQ37518.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] Length = 303 Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 93/248 (37%), Gaps = 6/248 (2%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + I+ T+ ++ +L I+ G ++ F+ A+ G+ VD C Sbjct: 13 LLCSSLSIVAPGTALASATPVLDRIRDTGTVRIAYRESASPFSYSDADKKPIGYAVDLCL 72 Query: 66 ALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + + + K+QY+ + R + + D+ T RE +AF Sbjct: 73 RVVDKLRTELKRPDLKVQYVLVTPSSRIPTILEGKADLECSTTTNN--RERREQVAFTIP 130 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ GI L ++ GTT+ + + + + + Sbjct: 131 HYIAGIRMLVKTSSGIHKWDDLRDKTVVSTKGTTSIAEMRRLNDSRVLHMKVEEVKEHAD 190 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + + DA+ D LY+ + P ++ ++ D+++ P A + + D E+ + V Sbjct: 191 AFAMVESGKADAFVMDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKSDPEFKHSV 250 Query: 242 SWTHYAMV 249 A++ Sbjct: 251 DRAMTAII 258 >gi|83745767|ref|ZP_00942824.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|207743682|ref|YP_002260074.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] gi|83727457|gb|EAP74578.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|206595081|emb|CAQ62008.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] Length = 303 Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 93/248 (37%), Gaps = 6/248 (2%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + I+ T+ ++ +L I+ G ++ F+ A+ G+ VD C Sbjct: 13 LLCSSLSIVAPGTALASATPVLDRIRDTGTVRIAYRESASPFSYSDADKKPIGYAVDLCL 72 Query: 66 ALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + + + K+QY+ + R + + D+ T RE +AF Sbjct: 73 RVVDKLRTELKRSDLKVQYVLVTPSSRIPTILEGKADLECSTTTNN--RERREQVAFTIP 130 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ GI L ++ GTT+ + + + + + Sbjct: 131 HYIAGIRMLVKTSSGIHKWDDLRDKTVVSTKGTTSIAEMRRLNDSRVLHMKVEEVKEHAD 190 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + + DA+ D LY+ + P ++ ++ D+++ P A + + D E+ + V Sbjct: 191 AFAMVESGKADAFVMDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKSDPEFKHSV 250 Query: 242 SWTHYAMV 249 A++ Sbjct: 251 DRAMTAII 258 >gi|296313420|ref|ZP_06863361.1| CjaA protein [Neisseria polysaccharea ATCC 43768] gi|296840052|gb|EFH23990.1| CjaA protein [Neisseria polysaccharea ATCC 43768] Length = 287 Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 59/265 (22%), Positives = 113/265 (42%), Gaps = 25/265 (9%) Query: 1 MY---KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTG 43 M K + I + T+ S+ A+ + IK++G ++ G+ Sbjct: 1 MKLNAKLKALLASAAIAVGLTACGGGSSGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGD 60 Query: 44 LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F V ANG +GFDV+ + L+ + P K++++ A R ++S ++D++ N Sbjct: 61 KPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILAN 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R + F G + K K I+ ++QL ++ V GTT + + Sbjct: 121 FTKTPERAE--AVDFADPYMKVALGVVSPKGKPITDIAQLKDQTLLVNKGTTADA----F 174 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 F ++ + + F++ E A + R A D + L+A + P V + ++ Sbjct: 175 FTKNHPEVKLLKFDQNTETFDALKDGRGAALAHDNALLWAWA--KENPDFEVAIGNLGPA 232 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAM 248 +APA+ +G+ + N V+ AM Sbjct: 233 EFIAPAVQKGNADLLNWVNGEIAAM 257 >gi|331007193|ref|ZP_08330404.1| amino acid ABC transporter, periplasmic amino acid-binding protein [gamma proteobacterium IMCC1989] gi|330418988|gb|EGG93443.1| amino acid ABC transporter, periplasmic amino acid-binding protein [gamma proteobacterium IMCC1989] Length = 120 Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 3/120 (2%) Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKS 282 K PL P + QGD W+N+V W+ AM+ AE L + + + +K + +P+ +R LG + Sbjct: 4 KEPLGPVVRQGDDAWFNVVRWSLMAMIEAEFLNVDSASADT-AKASGSPEQKRLLGAE-- 60 Query: 283 SNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 GE LGL++DW + I++ +GNY E F+RN+G+ S LKI RG NA W+KGG++Y+ PIR Sbjct: 61 GGAGEKLGLSEDWAFNIVKQVGNYSESFERNVGSGSALKIARGLNAQWNKGGILYSSPIR 120 >gi|254247735|ref|ZP_04941056.1| Extracellular solute-binding protein, family 10 [Burkholderia cenocepacia PC184] gi|124872511|gb|EAY64227.1| Extracellular solute-binding protein, family 10 [Burkholderia cenocepacia PC184] Length = 342 Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 93/257 (36%), Gaps = 6/257 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + V+ L + A L I++ + G V F+ V A G GF D Sbjct: 49 RPLLVAACALACGASVAAEPLAGTLEKIRQSNLISIGHRETSVPFSYVDAGGKVIGFSQD 108 Query: 63 FCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + +A+ +++++P+ ++ R +Q+ +D+ T R + F Sbjct: 109 LCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--F 166 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + GI L+G ++ GTT+E L + M I + Sbjct: 167 STTFFVATTRLLTRTTSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKD 226 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R AY D L ++ +P++ ++ S + + D ++ Sbjct: 227 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWQLVGTPQSSEAYGFMLRKDDPQFK 286 Query: 239 NIVSWTHYAMVTAEELG 255 +V ++ + E+ Sbjct: 287 ALVDGVLVQLMKSGEIN 303 >gi|288550055|ref|ZP_05969127.2| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Enterobacter cancerogenus ATCC 35316] gi|288316573|gb|EFC55511.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Enterobacter cancerogenus ATCC 35316] Length = 316 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 92/259 (35%), Gaps = 10/259 (3%) Query: 3 KDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 + ++L + + + S L I K G + G V F+ G Sbjct: 19 RKLATAMLVMGMSAGVVHAEDAPAAGSTLAKIAKNGVIVVGHRESSVPFSYYDNTQKVVG 78 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D+ A+ A+ +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 79 YSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQA 138 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + G + K I + L G ++ V +GTT+E+ L M I Sbjct: 139 A--FSDTIFVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLHKLNDDKKMDMRII 196 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D + L + +P I+ SK + + D Sbjct: 197 SAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGTAQSKEAYGCMLRKDD 256 Query: 235 TEWYNIVSWTHYAMVTAEE 253 ++ ++ T T+ E Sbjct: 257 ADFKKLIDDTIAQAQTSGE 275 >gi|229593102|ref|YP_002875221.1| putative ABC transporter substrate-binding exported protein [Pseudomonas fluorescens SBW25] gi|229364968|emb|CAY53090.1| putative ABC transport system, substrate-binding exported protein [Pseudomonas fluorescens SBW25] Length = 300 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 97/263 (36%), Gaps = 10/263 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEV-KANGDW 56 M K ++L + + A LG I + G V F+ V +G Sbjct: 1 MKKILLAGCTLGLLLGAQAHANPAPLDGTLGKIANAQSITLGYRDASVPFSYVGDNSGKP 60 Query: 57 KGFDVDFCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ V+ + I ++Y + ++ R +Q+ +D+ +T T R+ Sbjct: 61 MGYSVELADKIVERIRQKTGVATLNVKYTLVTSQTRIPLVQNGTVDLECGSTGVTAERQK 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F + + K GI + L+G ++ AGTT E L Y H Sbjct: 121 QVA--FSYGFIYVKGQLLTAKDSGIQGFADLAGKNVVTTAGTTNERFLKSYNAEHKANMF 178 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + E R A+ D + LY + P V++ + S+ + + + Sbjct: 179 VISAKDHGEAFKMLETGRAAAFYMDDALLYGERAKAKDPHNWVVVGEEQSREIYSCMVRK 238 Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255 D+++ +V+ T + + E+ Sbjct: 239 DDSQFLAVVNETLGDLYRSGEIN 261 >gi|26246629|ref|NP_752669.1| glutamate and aspartate transporter subunit [Escherichia coli CFT073] gi|91209696|ref|YP_539682.1| glutamate and aspartate transporter subunit [Escherichia coli UTI89] gi|117622864|ref|YP_851777.1| glutamate and aspartate transporter subunit [Escherichia coli APEC O1] gi|227884372|ref|ZP_04002177.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli 83972] gi|237707378|ref|ZP_04537859.1| glutamate/aspartate periplasmic binding protein [Escherichia sp. 3_2_53FAA] gi|300989986|ref|ZP_07179062.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 45-1] gi|301049845|ref|ZP_07196784.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 185-1] gi|26107028|gb|AAN79212.1|AE016757_116 Glutamate/aspartate Periplasmic binding protein precursor [Escherichia coli CFT073] gi|91071270|gb|ABE06151.1| glutamate/aspartate periplasmic binding protein precursor [Escherichia coli UTI89] gi|115511988|gb|ABJ00063.1| Glutamate/aspartate Periplasmic binding protein precursor [Escherichia coli APEC O1] gi|226898588|gb|EEH84847.1| glutamate/aspartate periplasmic binding protein [Escherichia sp. 3_2_53FAA] gi|227838458|gb|EEJ48924.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli 83972] gi|300298397|gb|EFJ54782.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 185-1] gi|300407261|gb|EFJ90799.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 45-1] gi|315287098|gb|EFU46512.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 110-3] gi|315292077|gb|EFU51429.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 153-1] gi|324006272|gb|EGB75491.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 57-2] gi|324010380|gb|EGB79599.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 60-1] Length = 325 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 53 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 112 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T R+ F + G + K I Sbjct: 113 LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 170 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 171 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 230 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 231 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 286 >gi|110640877|ref|YP_668605.1| glutamate and aspartate transporter subunit [Escherichia coli 536] gi|191173985|ref|ZP_03035503.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli F11] gi|215485688|ref|YP_002328119.1| glutamate and aspartate transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|218557586|ref|YP_002390499.1| glutamate and aspartate transporter subunit [Escherichia coli S88] gi|306812920|ref|ZP_07447113.1| glutamate and aspartate transporter subunit [Escherichia coli NC101] gi|312965095|ref|ZP_07779332.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli 2362-75] gi|331682072|ref|ZP_08382696.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli H299] gi|110342469|gb|ABG68706.1| glutamate/aspartate periplasmic binding protein precursor [Escherichia coli 536] gi|190905761|gb|EDV65382.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli F11] gi|215263760|emb|CAS08096.1| glutamate and aspartate transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|218364355|emb|CAR02030.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|222032408|emb|CAP75147.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli LF82] gi|294492965|gb|ADE91721.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli IHE3034] gi|305853683|gb|EFM54122.1| glutamate and aspartate transporter subunit [Escherichia coli NC101] gi|307552518|gb|ADN45293.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli ABU 83972] gi|307627914|gb|ADN72218.1| glutamate and aspartate transporter subunit [Escherichia coli UM146] gi|312290186|gb|EFR18069.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli 2362-75] gi|312945195|gb|ADR26022.1| glutamate and aspartate transporter subunit [Escherichia coli O83:H1 str. NRG 857C] gi|320194170|gb|EFW68802.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli WV_060327] gi|323952774|gb|EGB48642.1| extracellular solute-binding protein 3 [Escherichia coli H252] gi|323958407|gb|EGB54113.1| extracellular solute-binding protein 3 [Escherichia coli H263] gi|331080751|gb|EGI51925.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli H299] Length = 302 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T R+ F + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263 >gi|295677664|ref|YP_003606188.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295437507|gb|ADG16677.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 297 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 97/258 (37%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L + + + ++ L IK G + G + F+ + G+ Sbjct: 1 MKVKKAALLLATLGLFTVGAHAQDSGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGY 60 Query: 60 DVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 D+ A+ + K++ +P+ ++ R +Q+ +DI +T L R Sbjct: 61 SQDYAVKIVEAVKQKLNMPNLKVKLVPVTSQNRIPLVQNGTVDIECGSTTNNLER--QQQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 AF + G + K GI L G ++ AGTT+E L + NM + I Sbjct: 119 AAFTNTIFVIGTRLMTKKDSGIKDFPDLKGKTVVTTAGTTSERLLRKMNQDKNMGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D + L + + P++ VI+ S+ + + D Sbjct: 179 AKDHGESFLTLSTGRAAAFMMDDALLAGERAKSSNPNDFVIVGTPQSREAYGCMLRKNDA 238 Query: 236 EWYNIVSWTHYAMVTAEE 253 ++ + + + E Sbjct: 239 DFKKVADDAIAKVQLSSE 256 >gi|146296044|ref|YP_001179815.1| extracellular solute-binding protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409620|gb|ABP66624.1| amino acid ABC transporter substrate-binding protein, PAAT family [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 267 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 92/250 (36%), Gaps = 13/250 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K + +L L I F S +N S L IK+ G++ N + Sbjct: 4 KKLITICLLVLFIATFLSGCSNKNQNISTLQKIKQNKEFVVGMDNTFPPMEFTDDNNNTV 63 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD ++ + +K++ + ++ AL+SK+ D + T R+ + L Sbjct: 64 GFDVDLANEIAKRLG---AKLKIVAVDWSGIQSALKSKKFDAIISCFSITDERKKAFNL- 119 Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + Q + K I S L G I VQA TT + + K N + + Sbjct: 120 -AGPYLYIRQVIAVKKGDTSIKSFEDLKGIKIGVQANTTGDSAVQKM-KFINYEKDVTRY 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ER+ + R A D + A P + I P + K P+ A+ + D + Sbjct: 178 ERITDAFNDLDIGRIKAVVIDS--VVAYYYKKQNPEKFDIAPAELEKEPVGIALRKEDKD 235 Query: 237 WYNIVSWTHY 246 Y + Sbjct: 236 LYEEIQKILN 245 >gi|206560608|ref|YP_002231373.1| periplasmic glutamate/aspartate-binding protein [Burkholderia cenocepacia J2315] gi|198036650|emb|CAR52548.1| periplasmic glutamate/aspartate-binding protein [Burkholderia cenocepacia J2315] Length = 306 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 94/257 (36%), Gaps = 6/257 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + V+ L + + L I++ + G V F+ V A+G GF D Sbjct: 13 RSLLVAACVLACGASVAAEPLSGTLEKIRQANLISIGHRETSVPFSYVDASGKVIGFSQD 72 Query: 63 FCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + +A+ +++++P+ ++ R +Q+ +D+ T R + F Sbjct: 73 LCERVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--F 130 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + GI L+G ++ GTT+E L + M I + Sbjct: 131 STTFFVATTRLLTRTTSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKD 190 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R AY D L ++ +P++ ++ S + + D ++ Sbjct: 191 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWRLVGTPQSSEAYGFMLRKDDPQFK 250 Query: 239 NIVSWTHYAMVTAEELG 255 +V ++ + E+ Sbjct: 251 ALVDGVLVQLMKSGEID 267 >gi|331656675|ref|ZP_08357637.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA206] gi|331054923|gb|EGI26932.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA206] Length = 302 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIIEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ F + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263 >gi|15596539|ref|NP_250033.1| binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|218892553|ref|YP_002441422.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254234461|ref|ZP_04927784.1| hypothetical protein PACG_00313 [Pseudomonas aeruginosa C3719] gi|254239713|ref|ZP_04933035.1| hypothetical protein PA2G_00337 [Pseudomonas aeruginosa 2192] gi|9947282|gb|AAG04731.1|AE004563_8 probable binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|126166392|gb|EAZ51903.1| hypothetical protein PACG_00313 [Pseudomonas aeruginosa C3719] gi|126193091|gb|EAZ57154.1| hypothetical protein PA2G_00337 [Pseudomonas aeruginosa 2192] gi|218772781|emb|CAW28566.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 302 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 88/258 (34%), Gaps = 8/258 (3%) Query: 4 DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61 + + +L + L IK+ G + G + F+ + G G+ Sbjct: 6 SLLSTAIVAALLSAPVVADELTGTLKKIKETGTITLGHRDASIPFSYLGTEPGKPIGYSH 65 Query: 62 DF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D A+ + K++Y + ++ R +Q+ +DI +T R+ + Sbjct: 66 DLQLKVVEAVKKELNLPELKVRYNLVTSQTRIPLVQNGTVDIECGSTTNNEERQK--QVD 123 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + G + K I L G ++ AGTT+E L M + I + Sbjct: 124 FSVGIFEVGTRLLSKKTANIKDFDDLKGKNVVTTAGTTSERLLKAMNADKKMGMNIISAK 183 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R A+ D + LY +P + V+ S + +GD + Sbjct: 184 DHGESFMMLESGRAVAFMMDDALLYGEMAKAKKPDDWVVGGTPQSFEIYGCMVRKGDAAF 243 Query: 238 YNIVSWTHYAMVTAEELG 255 +V + E+ Sbjct: 244 KKVVDKAITDTYASGEVN 261 >gi|313106334|ref|ZP_07792576.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] gi|310879078|gb|EFQ37672.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] Length = 349 Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 87/258 (33%), Gaps = 8/258 (3%) Query: 4 DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61 + + +L + L IK G + G + F+ + G G+ Sbjct: 53 SLLSTAIVAALLSAPVVADELTGTLKKIKDTGTITLGHRDASIPFSYLGTEPGKPIGYSH 112 Query: 62 DF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D A+ + K++Y + ++ R +Q+ +DI +T R+ + Sbjct: 113 DLQLKVVEAVKKELNLPDLKVRYNLVTSQTRIPLVQNGTVDIECGSTTNNEERQK--QVD 170 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + G + K I L G ++ AGTT+E L M + I + Sbjct: 171 FSVGIFEVGTRLLSKKTANIKDFDDLKGKNVVTTAGTTSERLLKAMNADKKMGMNIISAK 230 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R A+ D + LY +P + V+ S + +GD + Sbjct: 231 DHGESFMMLESGRAVAFMMDDALLYGEMAKAKKPDDWVVGGTPQSFEIYGCMVRKGDAAF 290 Query: 238 YNIVSWTHYAMVTAEELG 255 +V + E+ Sbjct: 291 KKVVDKAITDTYASGEVN 308 >gi|49084568|gb|AAT51210.1| PA1342 [synthetic construct] Length = 303 Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 88/258 (34%), Gaps = 8/258 (3%) Query: 4 DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61 + + +L + L IK+ G + G + F+ + G G+ Sbjct: 6 SLLSTAIVAALLSAPVVADELTGTLKKIKETGTITLGHRDASIPFSYLGTEPGKPIGYSH 65 Query: 62 DF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D A+ + K++Y + ++ R +Q+ +DI +T R+ + Sbjct: 66 DLQLKVVEAVKKELNLPELKVRYNLVTSQTRIPLVQNGTVDIECGSTTNNEERQK--QVD 123 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + G + K I L G ++ AGTT+E L M + I + Sbjct: 124 FSVGIFEVGTRLLSKKTANIKDFDDLKGKNVVTTAGTTSERLLKAMNADKKMGMNIISAK 183 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R A+ D + LY +P + V+ S + +GD + Sbjct: 184 DHGESFMMLESGRAVAFMMDDALLYGEMAKAKKPDDWVVGGTPQSFEIYGCMVRKGDAAF 243 Query: 238 YNIVSWTHYAMVTAEELG 255 +V + E+ Sbjct: 244 KKVVDKAITDTYASGEVN 261 >gi|261400798|ref|ZP_05986923.1| CjaA protein [Neisseria lactamica ATCC 23970] gi|269209400|gb|EEZ75855.1| CjaA protein [Neisseria lactamica ATCC 23970] Length = 284 Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 17/256 (6%) Query: 2 YKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 +K S + L S+ A+ + IK++G ++ G+ F V A Sbjct: 7 FKALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDA 66 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 NG +GFDV+ + L+ + P K++++ A R ++S ++D++ N T R Sbjct: 67 NGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTKTPERAE 126 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F G + K K I+ ++QL ++ V GTT + +F + + Sbjct: 127 --AVDFADPYMKVALGVVSPKGKPITDIAQLKDQTLLVNKGTTADA----FFTKSHPEVK 180 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + F++ E A + R A D + L+A + P V + ++ +APA+ + Sbjct: 181 LLKFDQNTETFDALKDGRGAALAHDNALLWAWA--KENPDFEVAIGNLGPAEFIAPAVQK 238 Query: 233 GDTEWYNIVSWTHYAM 248 G+ + N V+ AM Sbjct: 239 GNADLLNWVNGEIAAM 254 >gi|59802322|ref|YP_209034.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae FA 1090] gi|239999903|ref|ZP_04719827.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae 35/02] gi|240015593|ref|ZP_04722133.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae FA6140] gi|240081799|ref|ZP_04726342.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae FA19] gi|240114683|ref|ZP_04728745.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae PID18] gi|240122519|ref|ZP_04735475.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae PID332] gi|240126633|ref|ZP_04739519.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae SK-92-679] gi|240127229|ref|ZP_04739890.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae SK-93-1035] gi|260441510|ref|ZP_05795326.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae DGI2] gi|291044873|ref|ZP_06570582.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|293397951|ref|ZP_06642157.1| glutamine transport system substrate-binding protein [Neisseria gonorrhoeae F62] gi|59719217|gb|AAW90622.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae FA 1090] gi|291011767|gb|EFE03763.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291611897|gb|EFF40966.1| glutamine transport system substrate-binding protein [Neisseria gonorrhoeae F62] gi|317165198|gb|ADV08739.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae TCDC-NG08107] Length = 284 Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 111/262 (42%), Gaps = 22/262 (8%) Query: 1 MY-----KDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVG 46 M K S + L S+ A+ + IK++G ++ G+ Sbjct: 1 MKLNAKLKALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V ANG +GFDV+ + L+ + P K++++ A R ++S ++D++ N Sbjct: 61 FGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTQ 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R + F G + K K I+ ++QL ++ V GTT + +F Sbjct: 121 TPERAE--AVDFADPYMKVALGVVSPKNKPITDMAQLKDQTLLVNKGTTADA----FFTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + + F++ E A + R A D + L+A + P+ V + ++ + Sbjct: 175 SHPEVKLLKFDQNTETFDALKDGRGVALAHDNALLWAWA--KENPNFEVAIGNLGPAEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAM 248 APA+ +G+ + N V+ AM Sbjct: 233 APAVQKGNADLLNWVNGEIAAM 254 >gi|240013150|ref|ZP_04720063.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae DGI18] gi|240116885|ref|ZP_04730947.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae PID1] gi|240120221|ref|ZP_04733183.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae PID24-1] Length = 284 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 111/262 (42%), Gaps = 22/262 (8%) Query: 1 MY-----KDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVG 46 M K S + L S+ A+ + IK++G ++ G+ Sbjct: 1 MKLNAKLKALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V ANG +GFDV+ + L+ + P K++++ A R ++S ++D++ N Sbjct: 61 FGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTQ 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R + F G + K K I+ ++QL ++ V GTT + +F Sbjct: 121 TPERAE--AVDFADPYMKVALGVVSPKNKPITDMAQLKDQTLLVNKGTTADA----FFTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + + F++ E A + R A D + L+A + P+ V + ++ + Sbjct: 175 SHPEVKLLKFDQNTETFDALKDGRGVALAHDNALLWAWA--KENPNFEVAIGNLGPAEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAM 248 APA+ +G+ + N V+ AM Sbjct: 233 APAVQKGNADLLNWVNGEIAAM 254 >gi|194017138|ref|ZP_03055750.1| glutamine-binding protein (GlnBP) [Bacillus pumilus ATCC 7061] gi|194011006|gb|EDW20576.1| glutamine-binding protein (GlnBP) [Bacillus pumilus ATCC 7061] Length = 269 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 99/266 (37%), Gaps = 20/266 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTN---------ASILGDIKKRGFLKCGINTGLVGFAEVK 51 M + + + I + + S L I+K + G+ F Sbjct: 4 MKRFGLLLFMTCCIAALAACGSAEKGSTDAKKGSSLEAIQKDKKIIFGVKNDTRLFGLKN 63 Query: 52 A-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 NGD +GFD+D +A++ + D K ++ + +K R LQ I + T R Sbjct: 64 PSNGDIEGFDIDIAKAIAKEMLGDEGKAEFKEVTSKTRIPLLQKGDIHAIVATMTITEER 123 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNM 169 + + F + + GQ ++ K I S+ L G + G+T+ + + Sbjct: 124 KK--EVNFSDVYFEAGQSLLVKKGSDIQSIDDLKKGTKVLAVKGSTSSQNIREKAPEA-- 179 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + FE +E A ++++ T D + L+ + D S + ++ + P A Sbjct: 180 --SVLEFENYQEAFTALKSNQGQVLTTDNAILFGM---ADEDSNYEVVGGTFTDEPYGIA 234 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255 + +GD + ++ + E Sbjct: 235 VKKGDQKLTAAINKALKTLKGNGEYD 260 >gi|188025731|ref|ZP_02959612.2| hypothetical protein PROSTU_01484 [Providencia stuartii ATCC 25827] gi|188020278|gb|EDU58318.1| hypothetical protein PROSTU_01484 [Providencia stuartii ATCC 25827] Length = 295 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 90/249 (36%), Gaps = 7/249 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +S++ L L I G + G V F+ N G+ Sbjct: 1 MSK-IVLSMMVLGATCAVQAEELTGTLKKINDNGVIVVGHRESSVPFSYYDNNQKVVGYS 59 Query: 61 VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 D+ + A+ +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 60 QDYSNEIVDAVKKKLNKPNLEVKLIPITSQNRIPLLQNGTYDFECGSTTNNLERQKQAA- 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G + G+ + L+G ++ V +GTT+E+ L NMK I Sbjct: 119 -FSNTIFVVGTRLLTKNDSGVKDFADLAGKNVVVTSGTTSEILLNKLNDEKNMKMRIISA 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D + L + +P I+ ++ + + D + Sbjct: 178 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDIWEIVGKPQTEEAYGCMLRKDDPQ 237 Query: 237 WYNIVSWTH 245 + +V T Sbjct: 238 FKALVDETI 246 >gi|73540102|ref|YP_294622.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72117515|gb|AAZ59778.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 302 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 93/261 (35%), Gaps = 9/261 (3%) Query: 2 YKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 F L + + + + L IK G + G T + F+ +N G Sbjct: 5 KATFLCLALAASLPAGLAHAVDVAASPTLSKIKSSGTISIGHRTSSIPFSYYDSNQKVIG 64 Query: 59 FDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 F D C + + + ++ ++ +P+ ++ R +Q+ +D+ T R Sbjct: 65 FSQDLCDRVVNEVKKQTNQPNLQVRMVPVTSQNRISLVQNGTVDLECGVTTNLKSR--QQ 122 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 +AF + G ++ K + S LSG ++ AGTT+E L Sbjct: 123 QVAFSTTFFVAGTRLLVKKGSPVHDFSDLSGKAVVTNAGTTSERILRRLNDEKKANITIQ 182 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E ++ R A+ D L + P+E V++ S + + D Sbjct: 183 SAKDYGESFLILQSGRVAAFMMDDVLLSGARTLAPNPAEWVVVGTPQSFEAYGFMLRKDD 242 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + +V ++ + E+ Sbjct: 243 PGFKQLVDGVLTGLMKSGEIN 263 >gi|312876440|ref|ZP_07736424.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor lactoaceticus 6A] gi|311796798|gb|EFR13143.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor lactoaceticus 6A] Length = 266 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 95/251 (37%), Gaps = 14/251 (5%) Query: 1 MYKDF--FVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 MYK V ++ L I F + S N + L IKK G++ N + Sbjct: 1 MYKKAIALVLLIALFIPFLSGCSLNNQNMTTLEKIKKTKEFVVGMDNTFPPMEFTDDNNN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD ++ + +K++ + ++ AL+SK+ D + T R+ + Sbjct: 61 TVGFDVDLANEIAKKLG---AKLKIVAVDWSGIQSALKSKKFDAIISCFSITDERKKAFN 117 Query: 116 LAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 L + Q + K I S L G I VQA TT + + K N + Sbjct: 118 L--AGPYLYIRQVIAVKKGDSSIKSFEDLKGIKIGVQANTTGDSAVQKM-KFINYEKDVT 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +ER+ + R A D + A P + I P + + P+ A+ + D Sbjct: 175 RYERITDAFNDLNIGRIKAVVIDS--VVAYYYKKQNPEKFDIAPAQLEREPVVIALRKED 232 Query: 235 TEWYNIVSWTH 245 + YN + Sbjct: 233 KDLYNEIQKIL 243 >gi|255528450|ref|ZP_05395244.1| extracellular solute-binding protein family 3 [Clostridium carboxidivorans P7] gi|255507856|gb|EET84302.1| extracellular solute-binding protein family 3 [Clostridium carboxidivorans P7] Length = 270 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 85/256 (33%), Gaps = 22/256 (8%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGLVGFAE 49 M K ++ + + LF +N+ L +K G LK G++ Sbjct: 3 MKKISALVLTAVMAMSLFAGCGKSNSGTSTNQKTDNSLQKVKDAGVLKIGLDDSYPPMEF 62 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 + GFD+D + L+ + + + LAL+S + D + T Sbjct: 63 RDEKNELAGFDIDMGKELAKKLGVKYEPVT---TDFNGIVLALKSGKFDAIIAAMSITDE 119 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ + F GQ I+ I + L G ++ Q G+T E A Sbjct: 120 RKK--EIDFVGPYIDGGQIIIVKNSSAIQGKADLKGKTLAAQLGSTGEQAANKIEGAK-- 175 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 +++V E R DA D T + IL + ++K P Sbjct: 176 --EVKKYDKVTEAFHDLSIGRVDALIVD--GQVGGYYTKKEAGTYKILTEKLTKEPEGIG 231 Query: 230 IIQGDTEWYNIVSWTH 245 + + + E + + Sbjct: 232 VKKENKELKDALQKAL 247 >gi|66045410|ref|YP_235251.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae B728a] gi|63256117|gb|AAY37213.1| extracellular solute-binding protein, family 3 [Pseudomonas syringae pv. syringae B728a] Length = 304 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 90/257 (35%), Gaps = 9/257 (3%) Query: 6 FVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVD 62 + + + L T+ L IK G + G + F+ + +G G+ D Sbjct: 7 ILGVTLTVALSSTALMAAEPTGTLKKIKTSGTITLGHRDSSIPFSYMADGSGQPMGYSHD 66 Query: 63 F----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 A+ + ++Y + ++ R +Q+ +D+ +T T R + F Sbjct: 67 IQLKIVEAIKQELGMPKLNVRYNLVTSQTRIPLVQNGTVDLECGSTTNTAERAR--QVDF 124 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + ++ K L+G ++ AG+T E L M + I + Sbjct: 125 SVGIFEASTRLLVRKDSVYKDFQDLNGKNVVTTAGSTAERMLKVMNAEKKMNMNVISAKD 184 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + E + R A+ D + L +P + V+ S + +GD + Sbjct: 185 IGESYQMLESGRAIAFMQDDALLAGEMAKAKKPEDWVVTGTPQSNEIYGCTMRRGDPDLK 244 Query: 239 NIVSWTHYAMVTAEELG 255 +V + ++ + E+ Sbjct: 245 KVVDDSIKSLFVSGEIN 261 >gi|218688471|ref|YP_002396683.1| glutamate and aspartate transporter subunit [Escherichia coli ED1a] gi|218426035|emb|CAR06852.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli ED1a] Length = 302 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T R+ F + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQAA--FSNTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263 >gi|170695393|ref|ZP_02886539.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170139793|gb|EDT07975.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 297 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 100/260 (38%), Gaps = 7/260 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L + + + +A L IK G + G + F+ + G+ Sbjct: 1 MKVKKAALLLATLGLFTVGAHAQDAGTLKKIKDTGVIALGHRESSIPFSYYDDKQEVIGY 60 Query: 60 DVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +F A+ + K++ +P+ ++ R +Q+ +D+ +T R Sbjct: 61 SQEFALKVVEAVKQKLNAPNLKVKLIPVTSQNRIPLVQNGTVDMECGSTTNNAER--QQQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 +AF + G + K GI + L G ++ AGTT+E L + ++ + I Sbjct: 119 VAFSNTIFVIGTRLMTKKDSGIKDWADLKGKTVVTTAGTTSERLLRKMNQDKSLGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D + L + ++ P++ VI+ S + + D Sbjct: 179 AKDHGESFLTLSTGRAAAFMMDDALLAGERAKSNTPNDFVIVGAPQSHEAYGCMLRKNDP 238 Query: 236 EWYNIVSWTHYAMVTAEELG 255 E+ +V + T+ E Sbjct: 239 EFKKVVDDAIAKVETSGEAD 258 >gi|107028647|ref|YP_625742.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116690194|ref|YP_835817.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105897811|gb|ABF80769.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116648283|gb|ABK08924.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 306 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 93/257 (36%), Gaps = 6/257 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + V+ L + A L +++ + G V F+ V A G GF D Sbjct: 13 RPLLVAACALACGASVAAEPLAGTLDKVRQSNLISIGHRETSVPFSYVDAGGKVIGFSQD 72 Query: 63 FCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + +A+ +++++P+ ++ R +Q+ +D+ T R + F Sbjct: 73 LCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--F 130 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + GI L+G ++ GTT+E L + M I + Sbjct: 131 STTFFVATTRLLTRTTSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKD 190 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R AY D L ++ +P++ ++ S + + D ++ Sbjct: 191 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWQLVGTPQSSEAYGFMLRKDDPQFK 250 Query: 239 NIVSWTHYAMVTAEELG 255 +V ++ + E+ Sbjct: 251 ALVDGVLVQLMKSGEIN 267 >gi|300692905|ref|YP_003753900.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum PSI07] gi|299079965|emb|CBJ52642.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum PSI07] Length = 301 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 90/255 (35%), Gaps = 8/255 (3%) Query: 7 VSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 +++ I A L I+ + G+ + F+ + GF D C Sbjct: 10 IALAGAIAASVLPAQAEALDGTLKKIQDSNTILIGVREASIPFSYRDSKNQIIGFSADLC 69 Query: 65 RALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + + ++Q +P+ ++ R +Q+ +D+ T RE AF Sbjct: 70 ARVIDVVKQKVGKPDLQVQQIPVTSQNRTALVQNGSVDLECGVTTHLKSRE--QQTAFST 127 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + + G+ L+G S+ AGTT+E L M + I + Sbjct: 128 TFFIAATRLLTNVNSGVKDFPDLAGKSVITNAGTTSERILRKMNDEKKMNMNVISGKDYG 187 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E ++ R A+ D L + +P++ V+ S + + D ++ + Sbjct: 188 ESFLTLQSGRVQAFMMDDVLLAGARTLAQKPADWVVAGTPQSFEAYGFMLRRDDPQFKKL 247 Query: 241 VSWTHYAMVTAEELG 255 V T ++ E+ Sbjct: 248 VDDTLTGIMKRGEIN 262 >gi|296391932|ref|ZP_06881407.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa PAb1] gi|313110121|ref|ZP_07796023.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] gi|310882525|gb|EFQ41119.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] Length = 299 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 95/235 (40%), Gaps = 7/235 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAI----FDDPSKI 78 + L + G + G V F+ + +G G+ V+ + + K+ Sbjct: 26 SGTLKKVADNGTITLGYRDASVPFSYLGDNSGQPMGYSVELAGKVVERLKSTLGKPELKV 85 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y + ++ R +Q+ +D+ +T T R+ + F + + K GI+ Sbjct: 86 KYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQVA--FSYGFIYVKGQLLTRKDSGIA 143 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L G ++ AGTT E L +Y H + + + + E ++ R A+ D Sbjct: 144 HFDDLKGKNVVTTAGTTNERYLKNYNAEHKLGMNVVSAKDHGEAFQMLQSGRAVAFYMDD 203 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + LY + +P + V++ + S+ + + + D ++ +V+ T + + E Sbjct: 204 ALLYGERAKARQPHDWVVVGEPQSREIYSCMVRKDDPQFLALVNETLAGLYRSGE 258 >gi|206579054|ref|YP_002239696.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Klebsiella pneumoniae 342] gi|288936538|ref|YP_003440597.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|206568112|gb|ACI09888.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Klebsiella pneumoniae 342] gi|288891247|gb|ADC59565.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] Length = 303 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 90/263 (34%), Gaps = 15/263 (5%) Query: 4 DFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 ++++ T+ + S L I K G + G V F+ Sbjct: 2 QLRKLAAAMLVMGVTAGLAHAEDAAPAAGQSTLDKIAKNGVIVVGHRESSVPFSYYDNQQ 61 Query: 55 DWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G+ D+ A+ AI +++ +P+ ++ R LQ+ D +T L R Sbjct: 62 KVVGYSQDYSNAIVDAIKKKLNKPDLQVKLIPVTSQNRIPLLQNGTFDFECGSTTNNLER 121 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + F + G ++ K I L ++ V +GTT+E+ L M Sbjct: 122 QKQAA--FSDTIFVVGTRLLVKKGGPIKDFPDLKDKAVVVTSGTTSEILLHKLNDEKKMN 179 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 I + + + R A+ D + L + +P I+ SK + Sbjct: 180 MRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGTAQSKEAYGCML 239 Query: 231 IQGDTEWYNIVSWTHYAMVTAEE 253 + D + +V T T+ E Sbjct: 240 RKDDPSFKALVDETVAQAQTSGE 262 >gi|268595712|ref|ZP_06129879.1| antigenic protein [Neisseria gonorrhoeae 35/02] gi|268597898|ref|ZP_06132065.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268549101|gb|EEZ44519.1| antigenic protein [Neisseria gonorrhoeae 35/02] gi|268551686|gb|EEZ46705.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] Length = 282 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 58/255 (22%), Positives = 110/255 (43%), Gaps = 17/255 (6%) Query: 3 KDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 K S + L S+ A+ + IK++G ++ G+ F V AN Sbjct: 6 KALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDAN 65 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G +GFDV+ + L+ + P K++++ A R ++S ++D++ N T R Sbjct: 66 GKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTQTPERAE- 124 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F G + K K I+ ++QL ++ V GTT + +F + + Sbjct: 125 -AVDFADPYMKVALGVVSPKNKPITDMAQLKDQTLLVNKGTTADA----FFTKSHPEVKL 179 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + F++ E A + R A D + L+A + P+ V + ++ +APA+ +G Sbjct: 180 LKFDQNTETFDALKDGRGVALAHDNALLWAWA--KENPNFEVAIGNLGPAEFIAPAVQKG 237 Query: 234 DTEWYNIVSWTHYAM 248 + + N V+ AM Sbjct: 238 NADLLNWVNGEIAAM 252 >gi|306825704|ref|ZP_07459043.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432065|gb|EFM35042.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 273 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 10 MKKKFFLSALLISLFSLVAAKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 69 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 70 GIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 124 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF+++K I S+ L+G +I V G+ T+ + + K ++ + + Sbjct: 125 FTSPYYTDASGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKDLTFKFVELG 184 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 185 SYPELITSLHAHRIDAFSVDRSILSGYTSKRT-----ELLDDSFKPSDYGIVTKKSNTEL 239 Query: 238 YNIVSWTHYAMV 249 + + + Sbjct: 240 NDYLDTLVTKWI 251 >gi|242238549|ref|YP_002986730.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] gi|242130606|gb|ACS84908.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] Length = 298 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 87/236 (36%), Gaps = 7/236 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD----FCRALSSAIFDDPSKIQY 80 L +K G + G V F+ G+ D A+ A+ +++ Sbjct: 28 PTLQKVKDSGVIVIGHRESSVPFSYYDNQQKVVGYSQDYSDKIVEAVKKAVNAPNLQVKL 87 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D+ +T L R AF + G + K I Sbjct: 88 IPITSQNRIPLLQNGTFDLECGSTTNNLER--QQQAAFSNTIFVIGTRLLTKKGSDIKDF 145 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 S L+G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 146 SDLNGKAVVVTSGTTSEILLNKMNEEKKMNLRIISAKDHGDSFRTLESGRAVAFMMDDAL 205 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH-YAMVTAEELG 255 L + P E VI+ S + + D E+ +V T A + E + Sbjct: 206 LAGERAKAKNPDEWVIVGTPQSHEAYGCMLRKNDPEFKKLVDDTIAQAQTSGEAVK 261 >gi|237730633|ref|ZP_04561114.1| glutamate and aspartate transporter subunit [Citrobacter sp. 30_2] gi|226906172|gb|EEH92090.1| glutamate and aspartate transporter subunit [Citrobacter sp. 30_2] Length = 317 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 95/262 (36%), Gaps = 11/262 (4%) Query: 3 KDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + + S L I K G + G V F+ Sbjct: 19 RKLATAMLVMGMSAGLAHAEDAAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 78 Query: 58 GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +++ +P+ ++ R LQ+ D +T + R+ Sbjct: 79 GYSQDYSNAIVDAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQ 138 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + G + K + + L G ++ V +GTT+E+ L + M Sbjct: 139 AA--FSDTIFVVGTRLLAKKGGDVKDFADLKGKAVVVTSGTTSEVLLHKLNEEQKMDMRI 196 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 197 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKD 256 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 D E+ ++ T T+ E Sbjct: 257 DPEFKKLMDDTIAKAQTSGEAE 278 >gi|322377820|ref|ZP_08052309.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M334] gi|321281243|gb|EFX58254.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M334] Length = 296 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 103/251 (41%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 33 MKKKFFLSALLISLFGLAATKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 92 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 93 GIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 147 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 148 FTSPYYTDASGFLVNKSAKIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 207 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 208 SYPELITSLHAHRIDAFSVDRSILSGYTSKRT-----ALLDDSFKPSDYGIVTKKSNTEL 262 Query: 238 YNIVSWTHYAM 248 + + Sbjct: 263 NDYLDNLVTKW 273 >gi|283784426|ref|YP_003364291.1| glutamate/aspartate ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] gi|282947880|emb|CBG87442.1| glutamate/aspartate ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] Length = 302 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 94/260 (36%), Gaps = 11/260 (4%) Query: 3 KDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + + S L I K G + G V F+ Sbjct: 4 RKLATAMLVMGMSAGLAHAEDAAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63 Query: 58 GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +++ +P+ ++ R LQ+ D +T + R+ Sbjct: 64 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQ 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + G + K I + L G ++ V +GTT+E+ L M Sbjct: 124 AA--FSNTIFVVGTRLLAKKGGDIKDFADLKGKAVVVTSGTTSEILLHKLNDEQKMDMRI 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSEEAYGCMLRKN 241 Query: 234 DTEWYNIVSWTHYAMVTAEE 253 D E+ ++ T T+ E Sbjct: 242 DPEFKKLMDETIAQAQTSGE 261 >gi|154483455|ref|ZP_02025903.1| hypothetical protein EUBVEN_01158 [Eubacterium ventriosum ATCC 27560] gi|149735707|gb|EDM51593.1| hypothetical protein EUBVEN_01158 [Eubacterium ventriosum ATCC 27560] Length = 295 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 104/263 (39%), Gaps = 28/263 (10%) Query: 1 MYKDFFVSILCLIILFF--------------------TSFSTNASILGDIKKRGFLKCGI 40 M K +L + I+ S + A + +IKK G +K G+ Sbjct: 1 MKKKILGVLLVVGIIAGVIAGCGNSNTTQNGAENASQASATAKARTIDEIKKSGKIKIGV 60 Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 + F V NG +G+DV F + ++ + + ++ + A R L+S ++DI Sbjct: 61 FSDKNPFGYVDENGKVQGYDVYFAKRIAKDLLGSEDAVDFVYVEAASRVEYLKSAKVDIT 120 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 N T R+ + F G + +K I+ V+QL G + V GTT E Sbjct: 121 LANFTVTDERKE--QVDFALPYMKVALGIVSPQKAEITDVNQLKGKKLIVVKGTTAETY- 177 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 F + + F+ +E A R DA++ D + + A V + + Sbjct: 178 ---FSKNYPDVTLVKFDEYQEAYDALLDGRGDAFSTDNTEVLAWAKQ--NKGFVVGVESL 232 Query: 221 ISKSPLAPAIIQGDTEWYNIVSW 243 +APA+ +G+TE N ++ Sbjct: 233 GDIDTIAPAVQKGNTELLNWLND 255 >gi|303253934|ref|ZP_07340055.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS455] gi|302599110|gb|EFL66135.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS455] Length = 264 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 103/251 (41%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLAATKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF+++K I + L+G +I V G+ T+ + + K + + + Sbjct: 116 FTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L V+L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISKRT-----VLLDDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAM 248 + + Sbjct: 231 NDYLDTLVTKW 241 >gi|73542047|ref|YP_296567.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72119460|gb|AAZ61723.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 311 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 108/259 (41%), Gaps = 19/259 (7%) Query: 11 CLIILFFTSFST------------NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 +++L S + A +L I++ G ++ V F+ V A+G G Sbjct: 15 AVLVLSSLSCAAMLATGAASAGAATAPVLNHIQQTGVIRIAHRESSVPFSFV-ADGKPVG 73 Query: 59 FDVDFCRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + VD C ++ A + +++++P+ R A+ + D+ +T RE Sbjct: 74 YAVDLCLKIADAVRTSLHLPGLRVEWVPVTPANRIPAIVEGKADLECGSTTNN--RERRE 131 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 +AF Y G I+ GIS + L G ++ +GTT L + M++ + Sbjct: 132 QVAFTIPHYIAGSRMIVKTDSGISKWADLRGKTVVSTSGTTPLAMLRKMDEGKVMQWRLV 191 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + A A + DA+ D LY L+ RP + + ++++ P A + + D Sbjct: 192 EAKDHAQAFAMVEAGKADAFVMDDVLLYGLRANASRPGDFKVTGEMLTIEPYAIMLSKSD 251 Query: 235 TEWYNIVSWTHYAMVTAEE 253 E+ +V T A V +E Sbjct: 252 PEFKKLVDKTLIAAVYDQE 270 >gi|307704349|ref|ZP_07641266.1| ABC transporter substrate-binding protein [Streptococcus mitis SK597] gi|307622109|gb|EFO01129.1| ABC transporter substrate-binding protein [Streptococcus mitis SK597] Length = 264 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 106/251 (42%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLAATKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITEERKKL--YN 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF+++K I S+ L+G +I V G+ T+ + + K ++K+ + Sbjct: 116 FTSPYYTDASGFLVNKSAKIKSIEDLNGKTIGVAQGSITQRLITELGKKKDLKFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L V+L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISKRT-----VLLDDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAM 248 + + Sbjct: 231 NDYLDNLVTKW 241 >gi|163791025|ref|ZP_02185446.1| amino acid ABC transporter, amino acid-binding protein [Carnobacterium sp. AT7] gi|159873670|gb|EDP67753.1| amino acid ABC transporter, amino acid-binding protein [Carnobacterium sp. AT7] Length = 273 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 57/263 (21%), Positives = 104/263 (39%), Gaps = 22/263 (8%) Query: 1 MYKD-FFVSILCLIILFFTSFSTNAS-------------ILGDIKKRGFLKCGINTGLVG 46 M K +++ +LF + S++ + IK+ G LK G+ + Sbjct: 1 MKKRNLLATVVLSSVLFLGACSSDDDATKAGTTNNSDQVTVESIKEAGVLKVGVKEDVPN 60 Query: 47 FAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 F + G+ +GF++D + L+ I DP I+ P+ AK R L + ++D++ Sbjct: 61 FGLKNTDTGEIEGFEIDIAKKLAEEILGDPDAIELTPVTAKTRGPLLDNGEVDMIIATFT 120 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 T R+ + F Y D G ++ K K + + GA+I V +TT + + Sbjct: 121 VTEERKET--YNFTDAYYEDAVGLLVKKDKNYEGLKDMDGATIGVSQSSTTAEAIEAEAE 178 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 +++ + EI AA + R DA++ D S L IL D + Sbjct: 179 KYDIAIDFSEYATYPEIKAALDSGRVDAFSVDRSILAGYL-----DDSTEILSDRFATQD 233 Query: 226 LAPAIIQGDTEWYNIVSWTHYAM 248 A + +TE + + Sbjct: 234 YGIATKKTNTELADYTNDLITTW 256 >gi|209517530|ref|ZP_03266370.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209502063|gb|EEA02079.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 297 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 95/258 (36%), Gaps = 7/258 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L + + + ++ L IK G + G + F+ + G+ Sbjct: 1 MKIKKAALLLATLGLFTVGAHAQDSGTLKKIKDTGVISLGHRESSIPFSFYDDKQNVIGY 60 Query: 60 DVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 D+ A+ + K++ +P+ ++ R +Q+ +DI +T L R Sbjct: 61 SQDYALKIVEAVKQKLNMPNLKVKLVPVTSQNRIPLVQNGTVDIECGSTTNNLER--QQQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 AF + G + K GI L G ++ AGTT+E L + +M + I Sbjct: 119 AAFTNTIFVIGTRLMTKKDSGIKDFPDLKGKTVVTTAGTTSERLLRKMNQDKSMGMNIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E R A+ D + L + P + VI+ S+ + + D Sbjct: 179 AKDHGESFLTLSTGRAAAFMMDDALLAGERAKASNPGDFVIVGTPQSREAYGCMLRKNDA 238 Query: 236 EWYNIVSWTHYAMVTAEE 253 ++ + + + E Sbjct: 239 DFKKVADDAIAKVQLSSE 256 >gi|306829074|ref|ZP_07462264.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus mitis ATCC 6249] gi|304428160|gb|EFM31250.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus mitis ATCC 6249] Length = 264 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 102/252 (40%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFSLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLSKMIADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF+++K I S L+G +I V G+ T+ + + K + + + Sbjct: 116 FTSPYYTDASGFLVNKSANIKSFEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYTSKRT-----ELLDDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAMV 249 + + Sbjct: 231 NDYLDTLVTKWT 242 >gi|307130055|ref|YP_003882071.1| glutamate/aspartate ABC transporter periplasmic-binding protein [Dickeya dadantii 3937] gi|306527584|gb|ADM97514.1| periplasmic-binding component of an ABC superfamily glutamate/aspartate transporter [Dickeya dadantii 3937] Length = 307 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 97/266 (36%), Gaps = 17/266 (6%) Query: 3 KDFFVSILCLIILFFTS----FSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVK 51 + +S++ + + + +A L +K G + G V F+ Sbjct: 4 RKLALSVMLISTTATMAYAEEQAASAPKEDKSVPTLKKVKDSGVIVIGHRESSVPFSYYD 63 Query: 52 ANGDWKGFDVD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 G+ A+ A+ +++ LP+ ++ R LQ+ D+ +T Sbjct: 64 NQQKVVGYSQAYSDKIVEAVKKAVGAPNLQVKLLPITSQNRIPLLQNGTFDLECGSTTNN 123 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 L R AF + G + K GI + L+G ++ V +GTT+E+ L + Sbjct: 124 LER--QQQAAFSNTIFVIGTRLLTKKDSGIKDFTDLNGKAVVVTSGTTSEVLLNKMNEEK 181 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 M I + + + R A+ D + L + P E VI+ S Sbjct: 182 KMNLRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKNPDEWVIVGTPQSHEAYG 241 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEE 253 + + D E+ +V T + T+ E Sbjct: 242 CMLRKNDPEFKKLVDDTIAQVQTSGE 267 >gi|107100793|ref|ZP_01364711.1| hypothetical protein PaerPA_01001821 [Pseudomonas aeruginosa PACS2] gi|116049294|ref|YP_791903.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|296390281|ref|ZP_06879756.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa PAb1] gi|115584515|gb|ABJ10530.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] Length = 302 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 87/258 (33%), Gaps = 8/258 (3%) Query: 4 DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61 + + +L + L IK G + G + F+ + G G+ Sbjct: 6 SLLSTAIVAALLSAPVVADELTGTLKKIKDTGTITLGHRDASIPFSYLGTEPGKPIGYSH 65 Query: 62 DF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D A+ + K++Y + ++ R +Q+ +DI +T R+ + Sbjct: 66 DLQLKVVEAVKKELNLPDLKVRYNLVTSQTRIPLVQNGTVDIECGSTTNNEERQK--QVD 123 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + G + K I L G ++ AGTT+E L M + I + Sbjct: 124 FSVGIFEVGTRLLSKKTANIKDFDDLKGKNVVTTAGTTSERLLKAMNADKKMGMNIISAK 183 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R A+ D + LY +P + V+ S + +GD + Sbjct: 184 DHGESFMMLESGRAVAFMMDDALLYGEMAKAKKPDDWVVGGTPQSFEIYGCMVRKGDAAF 243 Query: 238 YNIVSWTHYAMVTAEELG 255 +V + E+ Sbjct: 244 KKVVDKAITDTYASGEVN 261 >gi|167461572|ref|ZP_02326661.1| glutamine ABC transporter (glutamine-binding protein) [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381527|ref|ZP_08055506.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154534|gb|EFX46831.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 284 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 97/237 (40%), Gaps = 11/237 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + IK+RG L G+ F +G+ G+DVDF +AL+ D +K++ Sbjct: 44 TAAGGTFQKIKERGKLIVGVKYDTNLFGLKDPASGEVTGYDVDFAKALAKKFLGDENKLE 103 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +N+K R L + +ID + + R+ + F + + GQ ++ K I Sbjct: 104 LEEVNSKTRIPMLDNGEIDAIIATMTISEERKK--QVDFSDVYFKAGQSLLVKKGSPIKG 161 Query: 140 VSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + G + G T+ + + + + +E +E A +A + DA T D Sbjct: 162 IGDIRKGTKVLTAKGATSGKNIKEKAE----GVQVLEYENYQEAFNALKAGKGDALTTDN 217 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 S LY + + ++ + + P A+ +G+ E+ V+ M + E Sbjct: 218 SILYGMVKQDPN---FEVVGEPFTDEPYGIAVKKGEAEFLKEVNGLLKEMQSNGEAD 271 >gi|326789993|ref|YP_004307814.1| ABC transporter periplasmic protein [Clostridium lentocellum DSM 5427] gi|326540757|gb|ADZ82616.1| ABC-type transporter, periplasmic subunit family 3 [Clostridium lentocellum DSM 5427] Length = 288 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 60/261 (22%), Positives = 110/261 (42%), Gaps = 21/261 (8%) Query: 1 MYKDFFVSILCLIIL----FFTSFSTN---------ASILGDIKKRGFLKCGINTGLVGF 47 M + V + + +L T+ S N AS + IK+RG ++ G+ + F Sbjct: 1 MKQRLRVLSILVGLLVILGSLTACSNNKQASSNGESASGIEAIKERGKIRIGVFSDKPPF 60 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 V NG +G+DV F + ++ + D + ++++ + A R LQS ++DI+ N T Sbjct: 61 GYVDENGVNQGYDVYFAKRIAKDLLGDENAVEFVLVEAASRVEYLQSGKVDIILANFTVT 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 + + + F G + I+ VSQL G + V GTT E F + Sbjct: 121 K--DRAEVVDFALPYMKVALGVVSPDGAIITDVSQLEGKQLIVNKGTTAETY----FTEN 174 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + ++ E A + R A D + ++A + P + + +A Sbjct: 175 YPNIELLKYDENTEAFNALKDGRGAALAHDNTLVFAWAIQ--NPGFTTGIESLGGLDTIA 232 Query: 228 PAIIQGDTEWYNIVSWTHYAM 248 PA+ +G+TE N ++ A+ Sbjct: 233 PAVQKGNTELLNWINDEIKAL 253 >gi|161520627|ref|YP_001584054.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189353187|ref|YP_001948814.1| ABC-type polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|160344677|gb|ABX17762.1| extracellular solute-binding protein family 3 [Burkholderia multivorans ATCC 17616] gi|189337209|dbj|BAG46278.1| ABC-type polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] Length = 298 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 87/261 (33%), Gaps = 8/261 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F + + L + L IK G + GI V F+ G Sbjct: 1 MDRRFRWAAVALSCALAGAAHAQALTGTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIG 60 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + + D ++ +P+ ++ R LQ+ ID +T TL R+ Sbjct: 61 YSRDIAARIIDQLKTDLNLPGLTVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + G F K G+ L+G ++ AGT+ E L + M I Sbjct: 121 A--FSNSIFLYGIRFSTRKDSGVKDFPDLAGKTVATTAGTSDERLLRKLNEEKGMNMTII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D LY + P + + + A + + D Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVTGTPLMHENYACMMRKDD 238 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + +V M T+ E Sbjct: 239 PAFKRVVDGVIAKMQTSGEAE 259 >gi|158321705|ref|YP_001514212.1| extracellular solute-binding protein [Alkaliphilus oremlandii OhILAs] gi|158141904|gb|ABW20216.1| extracellular solute-binding protein family 3 [Alkaliphilus oremlandii OhILAs] Length = 285 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 20/257 (7%) Query: 1 MY--KDFFVSILC--LIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFA 48 M K ++L ++I + S A L IK+RG ++ G+ + F Sbjct: 1 MKIIKKVLATLLVGIVVIGGLVACSPKAGSEAGGTVDSLDAIKERGTIRIGVFSDKAPFG 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V ANG+ +GFDV + + + D SK++++ + A R L+S ++DI+ N T Sbjct: 61 YVDANGENQGFDVHIAKRFAKDLLGDESKVEFVLVEAANRVAFLESNKVDIIMANFTVTE 120 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R+ + F G + I+S+ L + V GTT DYF ++ Sbjct: 121 ERKE--KVDFANPYMKVSLGIVSPDGALITSIEDLKDQKLIVNKGTTA----QDYFTKNH 174 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + + +++ E A + R A D + + A P V +P + ++ +AP Sbjct: 175 PEIELLKYDQNTEAFEALKDLRGAALAHDNTEVLAWA--KGNPGFTVGIPVLGNQDVIAP 232 Query: 229 AIIQGDTEWYNIVSWTH 245 A+ +G+TE ++ Sbjct: 233 AVKKGNTELLAWINEEL 249 >gi|290510406|ref|ZP_06549776.1| glutamate and aspartate transporter subunit [Klebsiella sp. 1_1_55] gi|289777122|gb|EFD85120.1| glutamate and aspartate transporter subunit [Klebsiella sp. 1_1_55] Length = 318 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 90/263 (34%), Gaps = 15/263 (5%) Query: 4 DFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 ++++ T+ + S L I K G + G V F+ Sbjct: 17 QLRKLAAAMLVMGVTAGLAHAEDAAPAAGQSTLDKIAKNGVIVVGHRESSVPFSYYDNQQ 76 Query: 55 DWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G+ D+ A+ AI +++ +P+ ++ R LQ+ D +T L R Sbjct: 77 KVVGYSQDYSNAIVDAIKKKLNKPDLQVKLIPVTSQNRIPLLQNGTFDFECGSTTNNLER 136 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + F + G ++ K I L ++ V +GTT+E+ L M Sbjct: 137 QKQAA--FSDTIFVVGTRLLVKKGGPIKDFPDLKDKAVVVTSGTTSEILLHKLNDEKKMN 194 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 I + + + R A+ D + L + +P I+ SK + Sbjct: 195 MRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGTAQSKEAYGCML 254 Query: 231 IQGDTEWYNIVSWTHYAMVTAEE 253 + D + +V T T+ E Sbjct: 255 RKDDPSFKALVDETVAQAQTSGE 277 >gi|74311191|ref|YP_309610.1| glutamate and aspartate transporter subunit [Shigella sonnei Ss046] gi|73854668|gb|AAZ87375.1| putative periplasmic binding transport protein [Shigella sonnei Ss046] gi|323163917|gb|EFZ49726.1| glutamate/aspartate periplasmic-binding protein [Shigella sonnei 53G] Length = 302 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ F + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHSDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTTAQVQTSGEAE 263 >gi|299066929|emb|CBJ38124.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein [Ralstonia solanacearum CMR15] Length = 304 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 99/251 (39%), Gaps = 10/251 (3%) Query: 7 VSILCLIILFF---TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVD 62 ++LC + F T+ ++ +L I+ G ++ F+ A+ G+ VD Sbjct: 11 AALLCTSLSIFSPGTALASATPVLDRIRDTGTVRIAYRESASPFSYYDADSKKPIGYTVD 70 Query: 63 FCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + + + K+QY+ + R A+Q + D+ T RE +AF Sbjct: 71 LCLRVVDKLRTELKRPDLKVQYVLITPSTRIPAIQEGKADLECSTTTNN--RERREQVAF 128 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ GI L ++ GTT+ L + ++ + Sbjct: 129 TIPHYIAGIRMLVKTASGIHKWDDLRDKTVVSTKGTTSVAELRKMNDSRVLRIKFEEVKE 188 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E A + + DA+ D LY+ + P ++ ++ D+++ P A + + D ++ Sbjct: 189 HAEAFAMVESGKADAFVMDDVQLYSFRANAKHPQDYTVVGDMMTVEPYAIMLSKSDPDFK 248 Query: 239 NIVSWTHYAMV 249 + V A++ Sbjct: 249 HTVDRAMTAII 259 >gi|238893716|ref|YP_002918450.1| glutamate and aspartate transporter subunit [Klebsiella pneumoniae NTUH-K2044] gi|238546032|dbj|BAH62383.1| glutamate/aspartate periplasmic binding protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 328 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 91/263 (34%), Gaps = 12/263 (4%) Query: 3 KDFFVSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 + ++L + + + + + L I K G + G V F+ Sbjct: 29 RKLATAMLVMGMTAGLAQAEDAAPAAGQNTLDKIAKNGVIVVGHRESSVPFSYYDNQQKV 88 Query: 57 KGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ D+ A+ AI +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 89 VGYSQDYSNAIVDAIKKKLNKPDLQVKLIPVTSQNRIPLLQNGTFDFECGSTTNNLERQK 148 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F + G ++ K I L ++ V +GTT+E+ L M Sbjct: 149 QAA--FSDTIFVVGTRLLVKKGGPIKDFPDLKDKAVVVTSGTTSEILLHKLNDEKKMNMR 206 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + + + R A+ D + L + +P I+ SK + + Sbjct: 207 IISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGTPQSKEAYGCMLRK 266 Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255 D + +V T T+ E Sbjct: 267 DDPTFKALVDETVAQAQTSGEAE 289 >gi|300704696|ref|YP_003746299.1| glutamate/aspartate ABC transport protein high affinity periplasmic solute-binding protein [Ralstonia solanacearum CFBP2957] gi|299072360|emb|CBJ43698.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein [Ralstonia solanacearum CFBP2957] Length = 303 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 92/248 (37%), Gaps = 6/248 (2%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + I+ T+ ++ +L I+ G ++ F+ A+ G+ VD C Sbjct: 13 LLCSSLSIVAPGTALASATPVLDRIRDTGTVRIAYRESASPFSYSDADKKPIGYAVDLCL 72 Query: 66 ALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + + + K+QY+ + R + + D+ T RE +AF Sbjct: 73 RVVDKLRTELKRPDLKVQYVQVTPSSRIPTILEGKADLECSTTTNN--RERREQVAFTIP 130 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ GI L ++ GTT+ + + + + + Sbjct: 131 HYIAGIRMLVKTSSGIHKWDDLRDKTVVSTKGTTSIAEMRRLNDSRVLHMKVEEVKEHAD 190 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + + DA+ D LY+ + P ++ ++ D+++ P A + + D E+ V Sbjct: 191 AFAMVESGKADAFVMDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKSDPEFKRTV 250 Query: 242 SWTHYAMV 249 +++ Sbjct: 251 DRAMTSII 258 >gi|152985923|ref|YP_001349397.1| putative ABC transporter binding protein subunit [Pseudomonas aeruginosa PA7] gi|150961081|gb|ABR83106.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa PA7] Length = 302 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 87/258 (33%), Gaps = 8/258 (3%) Query: 4 DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61 + + +L + L IK G + G + F+ + G G+ Sbjct: 6 SLLSTAIVAALLSAPVVADELTGTLKKIKDTGTITLGHRDASIPFSYLGVEPGKPIGYSH 65 Query: 62 DF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D A+ + K++Y + ++ R +Q+ +DI +T R+ + Sbjct: 66 DLQLKVVEAVKKELNLPDLKVRYNLVTSQTRIPLVQNGTVDIECGSTTNNEERQK--QVD 123 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + G + K I L G ++ AGTT+E L M + I + Sbjct: 124 FSVGIFEVGTRLLSKKTANIKDFDDLKGKNVVTTAGTTSERLLKAMNADKKMGMNIISAK 183 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R A+ D + LY +P + V+ S + +GD + Sbjct: 184 DHGESFMMLESGRAVAFMMDDALLYGEMAKAKKPDDWVVGGTPQSFEIYGCMVRKGDAAF 243 Query: 238 YNIVSWTHYAMVTAEELG 255 +V + E+ Sbjct: 244 KKVVDKAITDTYASGEVN 261 >gi|221209879|ref|ZP_03582860.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD1] gi|221170567|gb|EEE03033.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD1] Length = 317 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 87/261 (33%), Gaps = 8/261 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F + + L + L IK G + GI V F+ G Sbjct: 20 MDRRFRWAAVALSCALAGAAHAQALTGTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIG 79 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + + D ++ +P+ ++ R LQ+ ID +T TL R+ Sbjct: 80 YSRDIAARIIDQLKTDLNLPGLTVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 139 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + G F K G+ L+G ++ AGT+ E L + M I Sbjct: 140 A--FSNSIFLYGIRFSTRKDSGVKDFPDLAGKTVATTAGTSDERLLRKLNEEKGMNMTII 197 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D LY + P + + + A + + D Sbjct: 198 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVTGTPLMHENYACMMRKDD 257 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + +V M T+ E Sbjct: 258 PAFKRVVDGVIAKMQTSGEAE 278 >gi|168177792|ref|ZP_02612456.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum NCTC 2916] gi|226947682|ref|YP_002802773.1| polar amino acid uptake ABC transporter amino acid-binding protein [Clostridium botulinum A2 str. Kyoto] gi|182670634|gb|EDT82608.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum NCTC 2916] gi|226841993|gb|ACO84659.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A2 str. Kyoto] Length = 267 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 89/254 (35%), Gaps = 12/254 (4%) Query: 1 MYKD--FFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K F ++ +I T S + L DIK +G G++ G+ Sbjct: 1 MKKKNILFSILIMGLIFMLTGCDNKSKEDTSLKDIKAKGEFVVGLDDSFPPMGFKNDKGE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D + ++ + + + P+ L+L +K ID++ T R+ Sbjct: 61 IVGFDIDLAKEVAKKMGVK---VVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKE--Q 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + Q +++ I S L+ ++ +Q G+++E+ L Sbjct: 116 INFSKPYVENKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKDFVKSLKELKK 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E +A R D + + + +P+ +L + + D Sbjct: 176 YSNNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGIGFRKTDN 233 Query: 236 EWYNIVSWTHYAMV 249 + V ++ Sbjct: 234 SFREAVDKALDEVI 247 >gi|255321552|ref|ZP_05362710.1| acriflavine resistance protein [Campylobacter showae RM3277] gi|255301408|gb|EET80667.1| acriflavine resistance protein [Campylobacter showae RM3277] Length = 278 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 59/270 (21%), Positives = 106/270 (39%), Gaps = 15/270 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K F + +F T + A L IK+RG+++ G+ + F V G Sbjct: 1 MRKLLFSFLATFAAVFLTGQANLQAAEADALAKIKERGYVRVGVFSDKPPFGYVDKEGKN 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +G+D+ F + ++ + D SK+++ + A R L + ++DI N T R + Sbjct: 61 QGYDIYFAKRIAKDLLGDESKVKFELVEAAGRVEVLVADKVDITLANFTKTPERARV--V 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G + I SV +L G + V GTT + F ++ I + Sbjct: 119 DFALPYMKVSLGVVSPDGAVIKSVDELKGKKLIVNKGTTADAY----FTKNHPDIELIKY 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ E AA R A D + L+A + P V + + +APA+ +G+ Sbjct: 175 DQNTETFAALVDKRGVALAHDNALLFAWA--KENPGFTVGIEALGEVDVIAPAVKKGNKA 232 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSK 266 ++ + + KN + K Sbjct: 233 LLEWLN---NEITELGKENFFHKNYDATLK 259 >gi|331645812|ref|ZP_08346915.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli M605] gi|331044564|gb|EGI16691.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli M605] Length = 325 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 + L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 53 GNTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 112 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T R+ F + G + K I Sbjct: 113 LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQAA--FSNTIFVVGTRLLTKKGGDIKD 170 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 171 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 230 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 231 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 286 >gi|317491137|ref|ZP_07949573.1| extracellular solute-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920684|gb|EFV42007.1| extracellular solute-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 304 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 91/263 (34%), Gaps = 12/263 (4%) Query: 1 MYKDFFVSILCLIILFFTSFS------TNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K +L + + + L IK G + G V F+ Sbjct: 3 MRKLALSMLLIGMSSTMVHAADDQKSEATSDTLQKIKNNGVIVVGHRESSVPFSYYDNAQ 62 Query: 55 DWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G+ D+ + A+ +++ LP+ ++ R LQ+ D +T R Sbjct: 63 KVVGYSQDYSNQIVDAVKKQLNMPNLQVKMLPITSQNRIPLLQNGTFDFECGSTTNNAER 122 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 AF + G ++ K I L+G + V +GTT+E+ L + NMK Sbjct: 123 --QQQAAFSNTIFVVGTRLLVKKGGDIKDFKDLAGKPVVVTSGTTSEILLNKLNEKDNMK 180 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 I + + + R A+ D + L + +P + I+ S + Sbjct: 181 MRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDQWEIVGTPQSHEAYGCML 240 Query: 231 IQGDTEWYNIVSWTHYAMVTAEE 253 + D + ++ T T+ E Sbjct: 241 RKNDPAFKKLMDETIAKAQTSGE 263 >gi|159794821|pdb|2IA4|A Chain A, Crystal Structure Of Novel Amino Acid Binding Protein From Shigella Flexneri Length = 279 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 85/240 (35%), Gaps = 6/240 (2%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----P 75 S L I K G + G V F+ G+ D+ A+ A+ Sbjct: 1 APAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPD 60 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +++ +P+ ++ R LQ+ D +T + R+ F + G + K Sbjct: 61 LQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGG 118 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I + L G ++ V +GTT+E+ L + I + + + R A+ Sbjct: 119 DIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKXNXRIISAKDHGDSFRTLESGRAVAFX 178 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + L + +P I+ S+ + + D ++ + T + T+ E Sbjct: 179 XDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCXLRKDDPQFKKLXDDTIAQVQTSGEAE 238 >gi|34495575|ref|NP_899790.1| amino acid ABC transporter periplasmic amino acid-binding protein [Chromobacterium violaceum ATCC 12472] gi|34101430|gb|AAQ57799.1| probable amino acid ABC transporter, periplasmic amino acid-binding protein [Chromobacterium violaceum ATCC 12472] Length = 302 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 82/241 (34%), Gaps = 6/241 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD---- 74 + L IK G + G + F+ N G+ VD + + + Sbjct: 25 GAAELTGTLKKIKDSGVIVLGNRDSSIPFSYYDNNQKPIGYSVDLANKVVDEVKKELKMP 84 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +++Y + ++ R +Q+ +D+ +T R + F + G + K Sbjct: 85 NLQVRYNLVTSQTRIPLVQNGTVDLECGSTTNNAERGKQVA--FSVGIFEIGTRLLTAKT 142 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 G+ L G ++ AGTT+E + + NM + I + E + R A+ Sbjct: 143 SGVKDFPDLKGKNVVTTAGTTSERLIKAMNASKNMGMNVISAKDHGESFLMLESGRAAAF 202 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + LY P V+ S + + D + +V + E+ Sbjct: 203 MMDDALLYGEMAKAKNPGNWVVTGKSQSYEIYGCMMRKDDPAFKKVVDTALEKTFKSGEV 262 Query: 255 G 255 Sbjct: 263 N 263 >gi|71735103|ref|YP_276039.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555656|gb|AAZ34867.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 358 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 88/258 (34%), Gaps = 8/258 (3%) Query: 4 DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDV 61 + ++ F+ L IK+ G + G + F+ + A+G G+ Sbjct: 60 HLLGVAITAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSH 119 Query: 62 DFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D + AI D K++Y + ++ R +Q+ +D+ +T + R + Sbjct: 120 DIQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVD 177 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + G + K L G ++ AGTT+E L M + I + Sbjct: 178 FSIGIFEVGTRLLSKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAK 237 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R A+ D + L +P + + S + +GD + Sbjct: 238 DHGESFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPF 297 Query: 238 YNIVSWTHYAMVTAEELG 255 V A + ++ Sbjct: 298 KKAVDDAIVATYKSGDIN 315 >gi|187777536|ref|ZP_02994009.1| hypothetical protein CLOSPO_01127 [Clostridium sporogenes ATCC 15579] gi|187774464|gb|EDU38266.1| hypothetical protein CLOSPO_01127 [Clostridium sporogenes ATCC 15579] Length = 267 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 89/254 (35%), Gaps = 12/254 (4%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K F ++ +I T + + L DIK +G G++ G+ Sbjct: 1 MKKKNILFSILIMGLIFMLTGCGNKSKEDTSLKDIKDKGEFVVGLDDSFPPMGFKNDKGE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D + ++ + + + P+ L+L +K ID++ T R+ Sbjct: 61 IVGFDIDLAKEVAKKMGVK---VVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKE--Q 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + Q +++ I S L+ ++ +Q G+++E+ L Sbjct: 116 INFSKPYVENKQIIVVYNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKDFVKSLKELKK 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E +A R D + + + +P+ +L + + D Sbjct: 176 YSNNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGVGFRKTDN 233 Query: 236 EWYNIVSWTHYAMV 249 + V ++ Sbjct: 234 SFREAVDKALDEVI 247 >gi|152969252|ref|YP_001334361.1| glutamate and aspartate transporter subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150954101|gb|ABR76131.1| glutamate/aspartate periplasmic binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 318 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 91/263 (34%), Gaps = 12/263 (4%) Query: 3 KDFFVSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 + ++L + + + + + L I K G + G V F+ Sbjct: 19 RKLATAMLVMGMTAGLAQAEDAAPAAGQNTLDKIAKNGVIVVGHRESSVPFSYYDNQQKV 78 Query: 57 KGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ D+ A+ AI +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 79 VGYSQDYSNAIVDAIKKKLNKPDLQVKLIPVTSQNRIPLLQNGTFDFECGSTTNNLERQK 138 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F + G ++ K I L ++ V +GTT+E+ L M Sbjct: 139 QAA--FSDTIFVVGTRLLVKKGGPIKDFPDLKDKAVVVTSGTTSEILLHKLNDEKKMNMR 196 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + + + R A+ D + L + +P I+ SK + + Sbjct: 197 IISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGTPQSKEAYGCMLRK 256 Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255 D + +V T T+ E Sbjct: 257 DDPTFKALVDETVAQAQTSGEAE 279 >gi|257094459|ref|YP_003168100.1| family 3 extracellular solute-binding protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046983|gb|ACV36171.1| extracellular solute-binding protein family 3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 284 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 6/242 (2%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 + L F + A L IK + G + F+ + G+ VD C + Sbjct: 7 LLCVATALSFPLSALAAGTLDKIKASRTISLGYREASIPFSYTGDDNQPWGYSVDLCTRV 66 Query: 68 SSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 ++A + + ++Q++P+ + R L+S ID+ +T +L R + F +T+ Sbjct: 67 AAAIVKQLGLEELQLQWVPVTPETRVAKLKSGAIDLECGSTTSSLAR--MQEVDFSLLTF 124 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 DG ++ K GI + L+G I V AGTT+E T+A+ H + + ++ Sbjct: 125 VDGGSYLTRKASGIKRLDDLAGKRIAVAAGTTSERTIAEALTQHQVGAQLVKVSDHQQGL 184 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 AA + DAY D S L L L + S+ V+ P+ S P A + + D ++ V+ Sbjct: 185 AAMVQGKVDAYASDRSLLIGLALDSGNQSDWVLGPETFSYEPYALMMRRNDADFRLAVNR 244 Query: 244 TH 245 Sbjct: 245 EL 246 >gi|270293187|ref|ZP_06199398.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M143] gi|270279166|gb|EFA25012.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M143] Length = 264 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 104/251 (41%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFSLAAAKPVQADTSVADIQKRGELVVGVKQDVPNFGYKNPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + +++ + K++Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMIANEL---KVKVRYVPVTAQTRGPLLDNEQVDLDIATFTITDERKKL--YN 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 116 FTSPYYTDASGFLVNKSANIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISKRT-----ELLEDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAM 248 + + Sbjct: 231 NDYLDTLVTKW 241 >gi|37525274|ref|NP_928618.1| glutamate and aspartate transporter subunit [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784701|emb|CAE13601.1| Glutamate/aspartate transport system permease protein GltI [Photorhabdus luminescens subsp. laumondii TTO1] Length = 297 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 92/250 (36%), Gaps = 7/250 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M V + L+ + + + L +K G + G V FA + G+ Sbjct: 1 MRMRNLVLTMMLLGMAGAAQAEELTGTLKKVKDDGVIIVGHRESSVPFAYYDNHQKVVGY 60 Query: 60 DVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 D+ + A+ +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 61 SQDYSNLIVEAVKKKLDMPNLQVKLIPVTSQNRIPLLQNGTYDFECGSTSNNLERQK--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + + K GI L+G ++ V AGTT+E+ L +MK I Sbjct: 119 VTFSNSIFIITTRLLTKKGSGIKDFPDLAGKNVVVSAGTTSEILLNKLNDEKSMKMRIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R A+ D + L + +P + I+ S+ + D Sbjct: 179 AKDHGDSFRTLESGRAIAFMVDDALLAGERAKAKKPDQWEIVGTPQSREAYGCISRKDDL 238 Query: 236 EWYNIVSWTH 245 ++ ++ T Sbjct: 239 QFKKLIDETI 248 >gi|309379285|emb|CBX22058.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 284 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 22/262 (8%) Query: 1 MY-----KDFFVSILCLIILFF---------TSFSTNASILGDIKKRGFLKCGINTGLVG 46 M K S + L S S+ A + IK++G ++ G+ Sbjct: 1 MKLNAKLKALLASAAIAVGLTACGGGSGDTQASQSSGAVTVAAIKEKGVIRIGVFGDKPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V ANG +GFDV+ + L+ + P K++++ A R ++S ++D++ N Sbjct: 61 FGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTK 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R + F G + K K I+ ++QL ++ V GTT + +F Sbjct: 121 TPERAE--AVDFADPYMKVALGVVSPKGKPITDIAQLKDQTLLVNKGTTADA----FFTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + + F++ E A + R A D + L+A + P+ V + ++ + Sbjct: 175 SHPEVKLLKFDQNTETFDALKDGRGAALAHDNALLWAWA--KENPNFEVAIGNLGPAEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAM 248 APA+ +G+ + N V+ AM Sbjct: 233 APAVQKGNADLLNWVNGEIAAM 254 >gi|121608200|ref|YP_996007.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121552840|gb|ABM56989.1| extracellular solute-binding protein, family 3 [Verminephrobacter eiseniae EF01-2] Length = 373 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 100/251 (39%), Gaps = 8/251 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + + L S L IK G + G+ G + NG + GF Sbjct: 73 MKKHLLAATVTSLCLSAGSVGAQTGDTLAKIKASGSVTLGVRESS-GLSYTLGNGKYVGF 131 Query: 60 DVDFCRALSS----AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + + + + +Y P+ ++ R + + +D+ +T T R+ + Sbjct: 132 HTEMAERILADIQKQLGLATLTTKYQPVTSQNRIPLVTNGTVDLECGSTTNTTARQKDVA 191 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F TY + GI+S+ L+G ++ GTT+ TL + +A + + + Sbjct: 192 --FAMTTYVEEIRTATKANSGITSIRDLNGKTVATTTGTTSVQTLRRHQRADGVDFKEVF 249 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + R DAY D+S L A + PS++ I+ +++S P+A + + D Sbjct: 250 GKDHADSFLLLETGRADAYVMDVSILAANISKSKAPSDYKIVGEVLSVEPIACMLRKDDP 309 Query: 236 EWYNIVSWTHY 246 + V + Sbjct: 310 AFKKAVDDSIK 320 >gi|300907833|ref|ZP_07125449.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 84-1] gi|301302137|ref|ZP_07208270.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 124-1] gi|309795477|ref|ZP_07689894.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 145-7] gi|300400465|gb|EFJ84003.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 84-1] gi|300842689|gb|EFK70449.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 124-1] gi|308120852|gb|EFO58114.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 145-7] gi|315255039|gb|EFU35007.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 85-1] Length = 327 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ F + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 173 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 233 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 288 >gi|82543098|ref|YP_407045.1| glutamate and aspartate transporter subunit [Shigella boydii Sb227] gi|157157607|ref|YP_001461825.1| glutamate and aspartate transporter subunit [Escherichia coli E24377A] gi|191168682|ref|ZP_03030462.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli B7A] gi|81244509|gb|ABB65217.1| putative periplasmic binding transport protein [Shigella boydii Sb227] gi|157079637|gb|ABV19345.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli E24377A] gi|190901274|gb|EDV61043.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli B7A] gi|320174704|gb|EFW49836.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Shigella dysenteriae CDC 74-1112] gi|320185366|gb|EFW60136.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Shigella flexneri CDC 796-83] gi|332097776|gb|EGJ02750.1| glutamate/aspartate periplasmic-binding protein [Shigella boydii 3594-74] Length = 302 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ F + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 208 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263 >gi|168181319|ref|ZP_02615983.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum Bf] gi|182675354|gb|EDT87315.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum Bf] Length = 267 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 88/254 (34%), Gaps = 12/254 (4%) Query: 1 MYKD--FFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K F ++ +I T S + L DIK +G G++ G Sbjct: 1 MKKKNILFSILIMGLIFILTGCDNKSKEDTSLKDIKAKGEFVVGLDDSFPPMGFKNDKGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D + ++ + + + P+ L+L +K ID++ T R+ Sbjct: 61 IVGFDIDLAKEVAKKMGVK---VVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKE--Q 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + Q +++ I S L+ ++ +Q G+++E+ L Sbjct: 116 INFSKPYVENKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKDFVKSLKELKK 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E +A R D + + + +P+ +L + + D Sbjct: 176 YSNNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGIGFRKTDN 233 Query: 236 EWYNIVSWTHYAMV 249 + V ++ Sbjct: 234 SFREAVDKALDEVI 247 >gi|300937877|ref|ZP_07152670.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 21-1] gi|300457120|gb|EFK20613.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 21-1] gi|325498166|gb|EGC96025.1| glutamate and aspartate transporter subunit [Escherichia fergusonii ECD227] Length = 325 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 53 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 112 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ F + G + K I Sbjct: 113 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 170 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 171 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 230 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 231 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 286 >gi|300901167|ref|ZP_07119271.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 198-1] gi|301025212|ref|ZP_07188783.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 69-1] gi|300355381|gb|EFJ71251.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 198-1] gi|300396164|gb|EFJ79702.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 69-1] Length = 327 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ F + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 173 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 233 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 288 >gi|293418767|ref|ZP_06661202.1| LOW QUALITY PROTEIN: glutamate and aspartate transporter subunit [Escherichia coli B088] gi|291325295|gb|EFE64710.1| LOW QUALITY PROTEIN: glutamate and aspartate transporter subunit [Escherichia coli B088] Length = 301 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ F + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263 >gi|170680102|ref|YP_001742772.1| glutamate and aspartate transporter subunit [Escherichia coli SMS-3-5] gi|218549769|ref|YP_002383560.1| glutamate and aspartate transporter subunit [Escherichia fergusonii ATCC 35469] gi|218553197|ref|YP_002386110.1| glutamate and aspartate transporter subunit [Escherichia coli IAI1] gi|218703989|ref|YP_002411508.1| glutamate and aspartate transporter subunit [Escherichia coli UMN026] gi|293403917|ref|ZP_06647911.1| glutamate and aspartate transporter subunit [Escherichia coli FVEC1412] gi|298379692|ref|ZP_06989297.1| glutamate and aspartate transporter subunit [Escherichia coli FVEC1302] gi|331662021|ref|ZP_08362944.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA143] gi|170517820|gb|ACB15998.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia coli SMS-3-5] gi|218357310|emb|CAQ89945.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|218359965|emb|CAQ97509.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI1] gi|218431086|emb|CAR11962.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli UMN026] gi|291428503|gb|EFF01528.1| glutamate and aspartate transporter subunit [Escherichia coli FVEC1412] gi|298279390|gb|EFI20898.1| glutamate and aspartate transporter subunit [Escherichia coli FVEC1302] gi|323170779|gb|EFZ56429.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli LT-68] gi|323945130|gb|EGB41192.1| bacterial extracellular solute-binding protein 3 [Escherichia coli H120] gi|323967602|gb|EGB63018.1| extracellular solute-binding protein 3 [Escherichia coli M863] gi|324114776|gb|EGC08744.1| extracellular solute-binding protein 3 [Escherichia fergusonii B253] gi|327254340|gb|EGE65962.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli STEC_7v] gi|331060443|gb|EGI32407.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli TA143] Length = 302 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ F + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263 >gi|148378449|ref|YP_001252990.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A str. ATCC 3502] gi|153933297|ref|YP_001382838.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A str. ATCC 19397] gi|153937497|ref|YP_001386405.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A str. Hall] gi|148287933|emb|CAL81999.1| binding-protein-dependent transport system,permease component [Clostridium botulinum A str. ATCC 3502] gi|152929341|gb|ABS34841.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A str. ATCC 19397] gi|152933411|gb|ABS38910.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A str. Hall] gi|322804728|emb|CBZ02280.1| amino acid ABC transporter, amino acid-binding protein [Clostridium botulinum H04402 065] Length = 267 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 12/254 (4%) Query: 1 MYKD--FFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K F ++ +I T S + L DIK +G G++ G+ Sbjct: 1 MKKKNILFSILIMGLIFMLTGCDNKSKEDTSLKDIKAKGEFVVGLDDSFPPMGFKNDKGE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D + ++ + K+ + P+ L+L +K ID++ T R+ Sbjct: 61 IVGFDIDLAKEVAKKMG---IKVVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKE--Q 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + Q +++ I S L+ ++ +Q G+++E+ L Sbjct: 116 INFSKPYVENKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKDFVKSLKELKK 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E +A R D + + + +P+ +L + + D Sbjct: 176 YSNNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGVGFRKTDN 233 Query: 236 EWYNIVSWTHYAMV 249 + V ++ Sbjct: 234 SFREAVDKALDEVI 247 >gi|330430558|gb|AEC21892.1| family 3 extracellular solute-binding protein [Pusillimonas sp. T7-7] Length = 308 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 91/261 (34%), Gaps = 18/261 (6%) Query: 1 MYKDF-------FVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFA 48 M K+F ++L IL F S S + L IK G + G + F+ Sbjct: 1 MLKNFSKKGATLRSALLAAGILAFASTSLASTPELTGTLKKIKDEGVVVLGYREASIPFS 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNT 104 G+ +D+ + I D KI+ LP+ ++ R LQ+ D T Sbjct: 61 YYDDAKQPIGYSIDYTNLILERIKQDLDLPQLKIRKLPITSQNRISLLQNGTFDFECTTT 120 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 RE + F + G ++ K GI+ L ++ V AGTT+E+ L Sbjct: 121 THNASREK--QVDFSNSLFVIGTRLLVKKDSGINDFDDLKDTNVVVGAGTTSEILLRKLN 178 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + I + E R A D + L + P ++VI S Sbjct: 179 VDKKLGMRIISAKDHSESFLTLSTGRAKAMMMDDALLAGERAKTKDPKDYVITGTPQSFE 238 Query: 225 PLAPAIIQGDTEWYNIVSWTH 245 I + DT+ ++ Sbjct: 239 VYGCMIRKDDTQMKALIDDVI 259 >gi|281177803|dbj|BAI54133.1| glutamate/aspartate ABC transporter substrate binding component [Escherichia coli SE15] gi|330910411|gb|EGH38921.1| glutamate Aspartate periplasmic binding protein precursor GltI [Escherichia coli AA86] Length = 302 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 + L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 30 GNTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T R+ F + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNAERQKQAA--FSNTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263 >gi|330505353|ref|YP_004382222.1| putative ABC transporter binding protein subunit [Pseudomonas mendocina NK-01] gi|328919639|gb|AEB60470.1| putative ABC transporter binding protein subunit [Pseudomonas mendocina NK-01] Length = 302 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 89/258 (34%), Gaps = 7/258 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDV 61 + V+I + L IK G + G + F+ + G+ Sbjct: 6 RVLSVAIAAAFLSTPVIAEELTGTLKKIKDSGTITLGHRDSSIPFSYFGDNSRQPIGYSH 65 Query: 62 DF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D A+ + K++Y + ++ R +Q+ +D+ +T + R + Sbjct: 66 DLQLKVVEAIKQELSMPDLKVRYNLVTSQTRIPLVQNGTVDLECGSTTNNIER--QQQVD 123 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + G + K GI+ L G ++ AGTT+E + M + I + Sbjct: 124 FSVGIFEVGTRLLAKKSSGINDFDDLKGKNVVTTAGTTSERLIKAMNAEKKMGMNVISAK 183 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E ++R A+ D + L +P + ++ S + +GD + Sbjct: 184 DHGESFLMLESNRAVAFMMDDALLAGEMAKAKKPDDWAVVGTPQSFEIYGCMVRKGDAGF 243 Query: 238 YNIVSWTHYAMVTAEELG 255 +V A + E+ Sbjct: 244 KQVVDKAISATFASGEIN 261 >gi|330005974|ref|ZP_08305449.1| glutamate-aspartate periplasmic-binding protein [Klebsiella sp. MS 92-3] gi|328536028|gb|EGF62435.1| glutamate-aspartate periplasmic-binding protein [Klebsiella sp. MS 92-3] Length = 318 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 92/263 (34%), Gaps = 12/263 (4%) Query: 3 KDFFVSILCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 + ++L + + + + + L I K G + G V F+ Sbjct: 19 RKLATAMLVMGMTAGLAQAEDAAPAAGQNTLDKIAKNGVIVVGHRESSVPFSYYDNQQKV 78 Query: 57 KGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ D+ A+ AI +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 79 VGYSQDYSNAIVDAIKKKLNKPDLQVKLIPVTSQNRIPLLQNGTFDFECGSTTNNLERQK 138 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F + G ++ K I S L ++ V +GTT+E+ L M Sbjct: 139 QAA--FSDTIFVVGTRLLVKKGGPIKDFSDLKDKAVVVTSGTTSEILLHKLNDEKKMNMR 196 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + + + R A+ D + L + +P I+ SK + + Sbjct: 197 IISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGTPQSKEAYGCMLRK 256 Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255 D + +V T T+ E Sbjct: 257 DDPTFKALVDETVAQAQTSGEAE 279 >gi|237793772|ref|YP_002861324.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum Ba4 str. 657] gi|229262805|gb|ACQ53838.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum Ba4 str. 657] Length = 267 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 89/254 (35%), Gaps = 12/254 (4%) Query: 1 MYKD--FFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K F ++ +I T S + L DIK +G G++ G+ Sbjct: 1 MKKKNILFSILIMGLIFILTGCDNKSKEDTSLKDIKAKGEFVVGLDDSFPPMGFKNDKGE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D + ++ + + + P+ L+L +K ID++ T R+ Sbjct: 61 IVGFDIDLAKEVAKKMGVK---VVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKE--Q 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + Q +++ I S L+ ++ +Q G+++E+ L Sbjct: 116 INFSKPYVENKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKDFVKSLKELKK 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E +A R D + + + +P+ +L + + D Sbjct: 176 YSNNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGIGFRKTDN 233 Query: 236 EWYNIVSWTHYAMV 249 + V ++ Sbjct: 234 SFREAVDKALDEVI 247 >gi|269139977|ref|YP_003296678.1| glutamate and aspartate transporter subunit [Edwardsiella tarda EIB202] gi|267985638|gb|ACY85467.1| glutamate and aspartate transporter subunit [Edwardsiella tarda EIB202] gi|304559810|gb|ADM42474.1| Glutamate Aspartate periplasmic binding protein precursor GltI [Edwardsiella tarda FL6-60] Length = 300 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 93/245 (37%), Gaps = 6/245 (2%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 + + + + L IK G + G V F+ G+ D+ A+ A+ Sbjct: 17 LFVAAQDATDGSPTLQKIKDSGVIVVGHRESSVPFSYYDNQQRVVGYSQDYANAIVDAVK 76 Query: 73 DD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +++ LP+ ++ R LQ+ D+ +T R +AF + G Sbjct: 77 KQLNLPALQVKLLPITSQNRIPLLQNGTYDVECGSTTHNAER--QQQVAFSNTLFIVGTR 134 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + K+ G+ L+G + V +GTT+E+ L + +MK I + + + Sbjct: 135 LLTAKESGVHDFRDLAGKPVVVTSGTTSEIMLNRMNEKDDMKMRIISAKDHGDAFRTLES 194 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R A+ D + L + +P VI+ S + + D + +V T + Sbjct: 195 GRAVAFMMDDALLAGERAKAKQPERWVIVGTPQSYEAYGCMLRRDDPAFKKLVDDTIAHV 254 Query: 249 VTAEE 253 T+ + Sbjct: 255 QTSGQ 259 >gi|309389821|gb|ADO77701.1| amino acid ABC transporter substrate-binding protein, PAAT family [Halanaerobium praevalens DSM 2228] Length = 264 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 93/252 (36%), Gaps = 9/252 (3%) Query: 1 MYKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F S L L+++ F ST A L +IK++G + G++ +G+ G Sbjct: 1 MKNNLFKSFLVLVLVLFLCSSTVMAADSLVEIKEKGKMVVGLDDSFPPMGFRNDDGEIVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D + + + + + ++ L+L++ ID++ T RE + F Sbjct: 61 FDIDLAKEAAKRLGVEAE---FKAVDWDGVILSLKNGMIDVIWNGLTITPAREK--SIDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q ++ K I + S L+ I +Q G++ + + F Sbjct: 116 SQPYLENSQSIVVQKNSEIKNKSHLAAKVIGIQLGSSAVSAVESEPEVMASFKELRKFSN 175 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E R R +A D + + RP + +L D + G + Sbjct: 176 NTEALMDLRTGRVEAVVLDK--IVGRYYMSKRPGQFRVLKDNFGAEKYGVGVRAGADSFR 233 Query: 239 NIVSWTHYAMVT 250 ++ M+ Sbjct: 234 KALNKVLTEMIE 245 >gi|319405905|emb|CBI79537.1| amino-acid ABC transporter binding protein [Bartonella sp. AR 15-3] Length = 301 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 65/297 (21%), Positives = 114/297 (38%), Gaps = 20/297 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + I + + + L IK+ G + G+ G A NG + GF Sbjct: 1 MRKLFLIFIAAIFMGLTSIAHATNDTLEKIKRTGEITLGVRESS-GLAYALGNGKYTGFH 59 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + + + I P K+ YLP+ ++ R L++ D +T R + Sbjct: 60 TEMAEHIINDISKKIGQPIKVNYLPITSQNRIPLLKNGTYDFECGSTTNDSARNKEVA-- 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F TY + + K GI S+ L+G + GTT + + N+ + + + Sbjct: 118 FAYTTYVETVKIAVKKNSGIKSIDDLNGKKVATTTGTTAVQLIRKNKRQKNIHFQVVNGK 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R DA+ DIS L A + PS++VIL +S P+A + D + Sbjct: 178 DHGESFLLLESGRADAFVMDISILSANIAKSKNPSDYVILDTTLSVEPIACMLRLNDKNF 237 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294 ++ + + Q N ++K F+ +N L L+K+ Sbjct: 238 EQAINDSI----------VRQINDASLAKLYNKW----FMEPIPPTNTIINLPLSKE 280 >gi|182683540|ref|YP_001835287.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CGSP14] gi|182628874|gb|ACB89822.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CGSP14] Length = 293 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 102/251 (40%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 30 MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 89 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 90 GIETDLAKIVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 144 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF+++K I + L+G +I V G+ T+ + + K + + + Sbjct: 145 FTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 204 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 205 SYPELITSLHAHRIDAFSVDRSILSGYTSKRT-----ELLDDSFKPSDYGIVTKKSNTEL 259 Query: 238 YNIVSWTHYAM 248 + + Sbjct: 260 NDYLDTLVTKW 270 >gi|319404432|emb|CBI78035.1| amino-acid ABC transporter binding protein [Bartonella rochalimae ATCC BAA-1498] Length = 301 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 97/248 (39%), Gaps = 6/248 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + I + + L IK+ G + G+ G A NG + GF Sbjct: 1 MRKSFVIFIAAIFMGLTNIAHATNDTLEKIKRTGEITLGVRESS-GLAYALGNGKYTGFH 59 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + + + I P K+ Y P+ ++ R L++ D +T R Sbjct: 60 TEMAERIINDISKKIGQPIKVNYQPITSQNRIPLLKNGTYDFECGSTTNDSARNKEAA-- 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F TY + ++ K GI S+ L+G + GTT + + N+ + + + Sbjct: 118 FAYTTYVESVKIVVKKNSGIQSIDDLNGKKVATTTGTTAVQLIRKNKRQKNIHFEVVNGK 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + + R DA+ D S L A + PS+++IL +S P+A + D + Sbjct: 178 DHGDSFLSLESGRADAFVMDTSILSAHIAKSKNPSDYIILDTTLSVEPIACMLRLNDKNF 237 Query: 238 YNIVSWTH 245 ++ + Sbjct: 238 EQTINDSI 245 >gi|157693147|ref|YP_001487609.1| glutamine ABC transporter binding protein [Bacillus pumilus SAFR-032] gi|157681905|gb|ABV63049.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Bacillus pumilus SAFR-032] Length = 269 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 100/266 (37%), Gaps = 20/266 (7%) Query: 1 MYKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M + + + I T+ + S L I+K + G+ F Sbjct: 4 MKRFGLLLFMTCCIAALTACGFAEKGSTDAKQGSSLETIQKDKKMIFGVKNDTRLFGLKN 63 Query: 52 AN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + GD +GFD+D +A++ I D K ++ + +K R LQ I + T R Sbjct: 64 PSSGDIEGFDIDIAKAIAKEILGDEGKAEFKEVTSKTRIPLLQKGDIHAIVATMTITEER 123 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNM 169 + + F + + GQ ++ K I S+ L G + G+T+ + + Sbjct: 124 KK--EVNFSDVYFEAGQSLLVKKGSDIQSIDDLKKGTKVLAVKGSTSSQNIREKAPEA-- 179 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + FE +E A ++++ T D + L+ + D S + ++ + P A Sbjct: 180 --SVLEFENYQEAFTALKSNQGQVLTTDNAILFGM---ADEDSNYEVVGGTFTDEPYGIA 234 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255 + +GD E ++ + E Sbjct: 235 VKKGDKELTTAINKALKTLKDNGEYD 260 >gi|310766983|gb|ADP11933.1| glutamate/aspartate ABC transporter, substrate-binding protein [Erwinia sp. Ejp617] Length = 309 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 52/270 (19%), Positives = 94/270 (34%), Gaps = 20/270 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-------------ILGDIKKRGFLKCGINTGLVGF 47 M L L + + L I K G + G V F Sbjct: 1 MKFRKLGLCLALAGIASGIAHAEDAKAPAAADAQQQTHTLEKIAKSGVIVVGHRESSVPF 60 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRN 103 + G+ D+ A+ +AI +++ LP+ ++ R LQ+ D + Sbjct: 61 SYYDNQQKAVGYSQDYSDAIVAAIKKKLNKPDLQVKMLPVTSQNRIPLLQNGTYDFECGS 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T + R+ +F + G ++ K I + L G ++ V +GTT+E+ L Sbjct: 121 TTNNIERQK--QASFSNSIFVVGTRLLVKKGGAIKDFADLKGKTVVVTSGTTSEILLNKL 178 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 M + + + + R A+ D + L + +PSE IL S Sbjct: 179 NDEQKMGMRIVSAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPSEWEILGTPQSH 238 Query: 224 SPLAPAIIQGDTEWYNIVSWTH-YAMVTAE 252 + +GD E+ ++ T A + E Sbjct: 239 EAYGCMLRKGDNEFKKLMDDTIVQAQTSGE 268 >gi|239814553|ref|YP_002943463.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239801130|gb|ACS18197.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 295 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 91/238 (38%), Gaps = 6/238 (2%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----K 77 A L I + G + V F+ + GF V+ A+ A+ + + Sbjct: 21 QAADTLAKIAESGKITLAYRESSVPFSYLDGPNKPIGFSVELSNAVVEAVKKKLNKPSLQ 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +Q +P+ ++ R + + +D+ +T R + F ++ G ++ K I Sbjct: 81 VQLMPVTSQNRIPLITNGTVDLECGSTTNNSARGKDVA--FAVNHFYTGTRLLVKKSSKI 138 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + L+ ++ GTT L + Y N+ ++ + + + R A+ D Sbjct: 139 KDYADLAKKTVASTTGTTNALVMRKYNTEKNLDMDIVLGKDHADAFLLVESDRAVAFAMD 198 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L+ L P+++ ++ + + P A + + D + +V T M+ + E Sbjct: 199 DILLFGLIANAKNPADYEVVGEPLQVEPYACMLPKDDPAFKKLVDDTFIGMMKSGEFE 256 >gi|257866174|ref|ZP_05645827.1| extracellular solute-binding protein [Enterococcus casseliflavus EC30] gi|257872505|ref|ZP_05652158.1| extracellular solute-binding protein [Enterococcus casseliflavus EC10] gi|257875809|ref|ZP_05655462.1| extracellular solute-binding protein [Enterococcus casseliflavus EC20] gi|257800108|gb|EEV29160.1| extracellular solute-binding protein [Enterococcus casseliflavus EC30] gi|257806669|gb|EEV35491.1| extracellular solute-binding protein [Enterococcus casseliflavus EC10] gi|257809975|gb|EEV38795.1| extracellular solute-binding protein [Enterococcus casseliflavus EC20] Length = 269 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 99/252 (39%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANG 54 M K F ++ L S + IL + K+ + G+ F + A Sbjct: 1 MRKKIFSFLVLAFALVTFSGCKGQSAAEIDILENSKETNQIVWGVKNDTRLFGLMDIATR 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + +GFD+D RA++ I ++ + +K R L++ ID + T R+ Sbjct: 61 EVRGFDIDIARAITEKILGRDGNAIFVEVTSKTRIPLLKNGNIDAIIATMTITEERKK-- 118 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + + GQ ++ K I + L+ ++ V G+T+ + + + Sbjct: 119 QVDFSDVYFDAGQSLLVAKDSPIQGIEDLTADTTVLVVKGSTSAVNIREAAPEA----QI 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + E E A ++ + DA T D + L + N + ++ + ++ P AI +G Sbjct: 175 LELENYAEAFTALQSGQGDAMTTDNAILLGMASENPN---YHLVGETFTEEPYGIAINKG 231 Query: 234 DTEWYNIVSWTH 245 + + V+ Sbjct: 232 QKPFLDAVNQAL 243 >gi|307706136|ref|ZP_07642955.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] gi|307618536|gb|EFN97684.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] Length = 264 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 104/251 (41%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S + + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSAILISLFGLAAAKPVQADTSVADIQKRGELVVGVKQDVPNFGYKNPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF+++K I S+ L+G +I V G+ T+ + + K + + + Sbjct: 116 FTSPYYTDASGFLVNKSAKIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L V+L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISKRT-----VLLDDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAM 248 + + Sbjct: 231 NDYLDNLVTKW 241 >gi|148269469|ref|YP_001243929.1| extracellular solute-binding protein [Thermotoga petrophila RKU-1] gi|147735013|gb|ABQ46353.1| extracellular solute-binding protein, family 3 [Thermotoga petrophila RKU-1] Length = 246 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 101/247 (40%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + I+ F+ + +IK RG+L G++ F V NG+ GFD Sbjct: 1 MKKLLVVLVLLVSIVIFS------GTIDEIKSRGYLLVGLSADFPPFEFVDENGNIAGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + + ++ + + +L +K+ID++ T R+ + F Sbjct: 55 VDLAKEIARRLGVE---LKIVDMTFDGLIPSLLTKKIDVIISGMTITEERKKVVA--FSD 109 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + GQ ++ K + L G ++ VQ GTT ++ ++ Y + F++ Sbjct: 110 PYFDAGQVIVVRKDSDFRPKTYEDLVGKTVAVQIGTTGDIEVSKY-----EGIKVVRFDK 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R DA D + + + VI ++S A+ + DT+ Sbjct: 165 FTDAFLELKRGRADAVVLD---SATARAFVAKNPDLVISSGVLSSEQYGIAVRKEDTDLL 221 Query: 239 NIVSWTH 245 ++ Sbjct: 222 EFINSVL 228 >gi|309700894|emb|CBJ00191.1| glutamate/aspartate ABC transporter, substrate-binding protein [Escherichia coli ETEC H10407] Length = 302 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 95/262 (36%), Gaps = 11/262 (4%) Query: 3 KDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + +IL L + + + + S L I K G + G V F+ Sbjct: 4 RKPATAILTLALSAGLAQADDAAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63 Query: 58 GFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ A+ +++ +P+ ++ R LQ+ D +T + R+ Sbjct: 64 GYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQ 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + G + K I + L ++ V +GTT+E+ L + M Sbjct: 124 AA--FSDTIFVVGTRLLTKKGGDIKDFANLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRI 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + L + +P I+ S+ + + Sbjct: 182 ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKD 241 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 D ++ ++ T + T+ E Sbjct: 242 DPQFKKLMDDTIAQVQTSGEAE 263 >gi|170759814|ref|YP_001785787.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A3 str. Loch Maree] gi|169406803|gb|ACA55214.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A3 str. Loch Maree] Length = 267 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 89/254 (35%), Gaps = 12/254 (4%) Query: 1 MYKD--FFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K F ++ +I T S + L DIK +G G++ G+ Sbjct: 1 MKKKNILFSILIMGLIFMLTGCDNKSKEDTSLKDIKAKGEFVVGLDDSFPPMGFKNDKGE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D + ++ + + + P+ L+L +K ID++ T R+ Sbjct: 61 IVGFDIDLAKEVAEKMGVK---VVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKE--Q 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + Q +++ I S L+ ++ +Q G+++E+ L Sbjct: 116 INFSKPYVENKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKNFVKSLKELKK 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E +A R D + + + +P+ +L + + D Sbjct: 176 YSNNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGVGFRKTDN 233 Query: 236 EWYNIVSWTHYAMV 249 + V ++ Sbjct: 234 SFREAVDKALDEII 247 >gi|311103230|ref|YP_003976083.1| glutamate/aspartate periplasmic-binding protein 1 [Achromobacter xylosoxidans A8] gi|310757919|gb|ADP13368.1| glutamate/aspartate periplasmic-binding protein 1 [Achromobacter xylosoxidans A8] Length = 295 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 102/259 (39%), Gaps = 9/259 (3%) Query: 4 DFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 L ++L + + S L IK +G + G + F+ + G+ Sbjct: 10 RVLRGALGAVLLAGSVAAMAQSTDPILERIKAKGTITLGYRESSIPFSYLDDARKPVGYA 69 Query: 61 VDFCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D C A+ + K+ Y+ +N + R + + +D+ +T +L R+ + Sbjct: 70 MDLCMKVVDAVRQRLQMPALKVDYIAVNPQNRIALVANGTVDLECGSTVNSLGRQA--QV 127 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + ++ K I V L+G ++ + TT E + +A N++ + Sbjct: 128 DFSAPHFISTTRLLVRKGADIKEVEDLNGKAVALPINTTPERLIKALIEAKNLQVRIVPV 187 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E A R DA++ D LY L+ + P + ++ +S P + + T Sbjct: 188 RDNSEGFLALSTGRADAFSTDDILLYGLRKSAPTPVDFEVVGRPLSFDPYGLMLQKNSTV 247 Query: 237 WYNIVSWTHYAMVTAEELG 255 + ++V+ T V + EL Sbjct: 248 FLSLVNATIARSVRSGELN 266 >gi|253581218|ref|ZP_04858475.1| extracellular solute-binding protein family 3 [Ruminococcus sp. 5_1_39B_FAA] gi|251847495|gb|EES75468.1| extracellular solute-binding protein family 3 [Ruminococcus sp. 5_1_39BFAA] Length = 330 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 98/257 (38%), Gaps = 22/257 (8%) Query: 1 MYKDFFVSILCLIILFFT--------------SFSTNASILGDIKKRGFLKCGINTGLVG 46 M K +L + T + A L +IKK G +K G+ + Sbjct: 1 MKKKILAVLLATGVAATTLLGGSILVSAADDGGNTAQARTLDEIKKDGKIKIGVFSDKNP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V NGD +G+D+ F + L+ + ++ + A R LQS ++D++ N Sbjct: 61 FGYVDENGDVQGYDIYFGKRLAKDLLGSEDDAEFTYVEAASRVEYLQSAKVDVILANFTV 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T + + + F G + I V L G + V GTT E D Sbjct: 121 TD--DRAEKVDFALPYMKVALGVVSPDDALIKDVKDLEGKKLIVVKGTTAETYFTD---- 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + F+ +E A R DA++ D + + A V + + + Sbjct: 175 NYPDIELVKFDEYQEAYDALLDGRGDAFSTDNTEVLAWAQQ--NEGFSVGIESLGDIDTI 232 Query: 227 APAIIQGDTEWYNIVSW 243 APA+ +G+T+ N ++ Sbjct: 233 APAVQKGNTDLLNAIND 249 >gi|238026228|ref|YP_002910459.1| glutamate/aspartate ABC transporter periplasmic glutamate/aspartate-binding protein [Burkholderia glumae BGR1] gi|237875422|gb|ACR27755.1| Glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia glumae BGR1] Length = 297 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 83/243 (34%), Gaps = 6/243 (2%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + + A L IK G + G + F+ N G+ DF + A+ Sbjct: 16 FAGGAIAQEAGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVIGYARDFQMRIVDAVKKK 75 Query: 75 PSKIQYL----PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + P+ ++ R +Q+ +DI +T L R+ F + G + Sbjct: 76 LNLPNLQTKNIPVTSQNRIPLVQNGTVDIECGSTTNNLDRQKQAA--FSTTYFVIGTRLM 133 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 K GI + L G ++ AGTT+E L M + I + E R Sbjct: 134 TSKDSGIKDFADLKGKTVVTTAGTTSERLLRAMNNDKQMGMNIISAKDHGESFQTLETGR 193 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A+ D + L + +P VI+ S+ + + D + +V Sbjct: 194 AVAFMMDDALLAGERAKAKKPDNWVIVGTPQSEEAYGCMMRKDDPAFKKVVDDAITETEK 253 Query: 251 AEE 253 + E Sbjct: 254 SGE 256 >gi|291616688|ref|YP_003519430.1| GltI [Pantoea ananatis LMG 20103] gi|291151718|gb|ADD76302.1| GltI [Pantoea ananatis LMG 20103] Length = 298 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 82/226 (36%), Gaps = 6/226 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 + L I G + G V F+ G+ + A++ AI +I+ Sbjct: 26 SGTLKKINDNGVIVIGHRESSVPFSYYDNQQKVVGYSQAYSNAIAEAIKAKLNKPDLQIK 85 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ F + G ++ K I Sbjct: 86 MIPITSQNRIPLLQNGTYDYECGSTTNNLERQKQAA--FSDTIFVIGTRLLVKKGSPIKD 143 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ V +GTT+E+ L M I + + R A+ D + Sbjct: 144 FDDLKGKTVVVTSGTTSEVLLHKLNDEKKMDMRIISAKDHGDSFRTLETGRAVAFMMDDA 203 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L + +P + VI+ SK + + D ++ +V T Sbjct: 204 LLAGERAKAKKPDDWVIIGTPQSKEAYGCMLRKDDPQFKALVDDTI 249 >gi|330966686|gb|EGH66946.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 304 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 89/258 (34%), Gaps = 8/258 (3%) Query: 4 DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDV 61 + + ++ F+ L IK+ G + G + F+ + A+G G+ Sbjct: 6 HLLGAAIAATLISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGIPMGYSH 65 Query: 62 DFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D + AI D K++Y + ++ R +Q+ +D+ +T + R + Sbjct: 66 DIQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVD 123 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + G + K L G ++ AGTT+E L M + I + Sbjct: 124 FSIGIFEVGTRLLSKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAK 183 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R A+ D + L +P + + S + +GD + Sbjct: 184 DHGESFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPF 243 Query: 238 YNIVSWTHYAMVTAEELG 255 V A + ++ Sbjct: 244 KKAVDDAIVATYKSGDIN 261 >gi|319940827|ref|ZP_08015166.1| extracellular solute-binding protein family 3 [Sutterella wadsworthensis 3_1_45B] gi|319805709|gb|EFW02490.1| extracellular solute-binding protein family 3 [Sutterella wadsworthensis 3_1_45B] Length = 300 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 101/259 (38%), Gaps = 7/259 (2%) Query: 2 YKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + CL L + L +++ G + G V F+ + A+G G+ Sbjct: 6 RRTAVAAATCLFALSGVVSAAELTGTLKKVQETGSITLGYRESSVPFSYLNADGKPVGYA 65 Query: 61 VDFCRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 C+ ++ A + ++Y + + R +Q+ +DI +T +L R+ Sbjct: 66 FTVCQRVADAVKSELGLKTLDVKYQAVTSANRIPLIQNGTVDIECGSTTNSLKRQREAA- 124 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + + K GI S+ L+G ++ V +GTT+ + ++ KAHN+K ++ Sbjct: 125 -FSVSYFGIQVSAAVWKSSGIKSLEDLNGKTVTVTSGTTSVALIKEFEKAHNLKIRYLMT 183 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + E R DA+ D L SE IL + P + D Sbjct: 184 KDFAESMQLVANKRADAFILDDVLLAGQISNLPNASEFTILDASLGVEPYGAMFRKDDAP 243 Query: 237 WYNIVSWTHYAMVTAEELG 255 + +V T M+ + EL Sbjct: 244 FKAVVDKTVKGMIASGELA 262 >gi|17545200|ref|NP_518602.1| amino-acid-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17427491|emb|CAD14009.1| probable amino-acid-binding periplasmic (pbp) abc transporter protein [Ralstonia solanacearum GMI1000] Length = 313 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 107/309 (34%), Gaps = 25/309 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M ++L I + ++ L IK G + G+ + F+ G Sbjct: 16 MNLAKLATVLAAIGVLSSAAHAQELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIG 75 Query: 59 FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D A+ + +++ +P+ ++ R LQ+ ID+ +T L R+ Sbjct: 76 YSYDVATKVVEAVKEQLKLKDLQVKEIPVTSQNRITLLQNGTIDLECGSTTNNLERQK-- 133 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 +F + G ++ K GI L G ++ AGTT+E L + + I Sbjct: 134 QASFTNTIFIIGTRMMVKKDSGIKDWVDLKGKNVVTTAGTTSERLLRKMNDEKQLGMNII 193 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D + LY + P++ V++ S+ + + D Sbjct: 194 STKDHGQSFLTLESGRAVAFMMDDALLYGERAKAKTPADWVVVGKPQSREAYGCMVRKDD 253 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL-GIDKSSNIGEALGLTK 293 + + T M + + N + +++ + L+ Sbjct: 254 APFKTLADKTIAGM---------------MKDGSINAEYKKWFEQPVPPKGLNLDFPLSD 298 Query: 294 DWTYRIIRH 302 D +I+ Sbjct: 299 D-MKALIKS 306 >gi|304395669|ref|ZP_07377552.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] gi|304356963|gb|EFM21327.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] Length = 298 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 44/226 (19%), Positives = 81/226 (35%), Gaps = 6/226 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 + L I G + G V F+ G+ D+ A+ AI +++ Sbjct: 26 SGTLKKINDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAIKAKLNKPDLQVK 85 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ F + G ++ K I Sbjct: 86 MIPITSQNRIPLLQNGTYDYECGSTTNNLERQKQAA--FSDTIFVIGTRLLVKKDGPIKD 143 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ V +GTT+E+ L + I + + R A+ D + Sbjct: 144 FADLKGKTVVVTSGTTSEVLLHKLNDEQKLDMRIISAKDHGDSFRTLETGRAVAFMMDDA 203 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L + +P IL SK + + D ++ +V T Sbjct: 204 LLAGERAKAKKPDNWEILGTPQSKEAYGCMLRKDDPQFKALVDETI 249 >gi|170767654|ref|ZP_02902107.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia albertii TW07627] gi|170123142|gb|EDS92073.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Escherichia albertii TW07627] Length = 302 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ F + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 208 LLAGERAKAKKPGNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIVQVQTSGEAE 263 >gi|325570409|ref|ZP_08146186.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus casseliflavus ATCC 12755] gi|325156619|gb|EGC68796.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus casseliflavus ATCC 12755] Length = 269 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 99/252 (39%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANG 54 M K F ++ L S + + IL + K+ + G+ F + A Sbjct: 1 MRKKIFSFLVLAFALVTFSGCKGQSAADIDILENSKETNQIVWGVKNDTRLFGLMDIATR 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + +GFD+D RA++ I ++ + +K R L++ ID + T R+ Sbjct: 61 EVRGFDIDIARAITEKILGRDGNAIFVEVTSKTRIPLLKNGNIDAIIATMTITEERKK-- 118 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + + GQ ++ K I + L+ ++ V G+T+ + + + Sbjct: 119 QVDFSDVYFDAGQSLLVAKDSPIQGIEDLTADTTVLVVKGSTSAVNIREAAPEA----QI 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + E E A ++ + DA D + L + N + ++ + ++ P AI +G Sbjct: 175 LELENYAEAFTALQSGQGDAMITDNAILLGMASENPN---YHLVGETFTEEPYGIAINKG 231 Query: 234 DTEWYNIVSWTH 245 + + V+ Sbjct: 232 QKPFLDAVNQAL 243 >gi|170733526|ref|YP_001765473.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|169816768|gb|ACA91351.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 306 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 92/257 (35%), Gaps = 6/257 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + V+ L + L +++ + G V F+ V A G GF D Sbjct: 13 RPLLVAACALACGASVAAEPLTGTLDKVRQSNLISIGHRETSVPFSYVDAGGKVIGFSQD 72 Query: 63 FCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C + +A+ +++++P+ ++ R +Q+ +D+ T R + F Sbjct: 73 LCDRVIAAVKARTGKPDLQVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--F 130 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + GI L+G ++ GTT+E L + M I + Sbjct: 131 STTFFVATTRLLTRTTSGIRDFPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKD 190 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R AY D L ++ +P++ ++ S + + D ++ Sbjct: 191 YGEGRLTLESGRAAAYMMDDVLLAGVRQLAAKPADWQLVGTPQSSEAYGFMLRKDDPQFK 250 Query: 239 NIVSWTHYAMVTAEELG 255 +V ++ + E+ Sbjct: 251 ALVDGVLVQLMKSGEIN 267 >gi|91780195|ref|YP_555402.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91692855|gb|ABE36052.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 272 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 70/323 (21%), Positives = 110/323 (34%), Gaps = 63/323 (19%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDV 61 K + S + +L S +A L DIKK G L+ F V G DV Sbjct: 2 KIWTRSAAVVGLLLTLSGVAHADRLDDIKKAGVLRVATFDSNPPFGFVDPKTNQIVGLDV 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D+ RA+++ + ++ P N R L+S ++D++ N T R+ + F Sbjct: 62 DYARAVAAKLGVK---LEIQPTNPANRIAFLKSNKVDLVFANFTITDERKK--EIDFSTP 116 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + G FI K + S QL I GTT E + F A + ++ Sbjct: 117 YFASGTQFIAKKG-VLKSPQQLDSLRIGADKGTTNEQQVRAQFPAA----TIVAYDDTPF 171 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AA RA A T D L AL ++ I P IS + + + N+V Sbjct: 172 AFAALRAGNVQAITQDGPKLVALLANVPDKEKYEIPPFTISNDYEGVGVPKNEARLLNVV 231 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 + T +GL + Sbjct: 232 NETL-------------------------------------------VGLEAN------- 241 Query: 302 HMGNYGEMFDRNLGNQSELKIPR 324 GN +++D+ G S+ +PR Sbjct: 242 --GNAAKIYDQWFGPGSKAPLPR 262 >gi|330815541|ref|YP_004359246.1| Glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia gladioli BSR3] gi|327367934|gb|AEA59290.1| Glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia gladioli BSR3] Length = 297 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 85/244 (34%), Gaps = 6/244 (2%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 + + L IK G + G + F+ N G+ DF + A+ Sbjct: 15 TFAGGAMAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQKVIGYARDFQMKVVDAVKK 74 Query: 74 D----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 +++ +P+ ++ R +Q+ +DI +T L R+ F + G Sbjct: 75 KLNLPNLQVKDIPVTSQNRIPLVQNGTVDIECGSTTNNLERQKQAA--FSTTYFVIGTRL 132 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + K GI + L G ++ AGTT+E L M I + E Sbjct: 133 MTSKDSGIKDFADLKGKTVVTTAGTTSERLLRAMNNDKQMGMSIISAKDHGESFQTLETG 192 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R A+ D + L + +P VI+ S+ + + D + +V + Sbjct: 193 RAVAFMMDDALLAGERAKAKKPDNWVIVGTPQSEEAYGCMMRKDDPAFKAVVDGAITELE 252 Query: 250 TAEE 253 + E Sbjct: 253 KSGE 256 >gi|257486609|ref|ZP_05640650.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|320325614|gb|EFW81676.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. B076] gi|320327102|gb|EFW83116.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330989515|gb|EGH87618.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010092|gb|EGH90148.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 304 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 88/258 (34%), Gaps = 8/258 (3%) Query: 4 DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDV 61 + ++ F+ L IK+ G + G + F+ + A+G G+ Sbjct: 6 HLLGVAITAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSH 65 Query: 62 DFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D + AI D K++Y + ++ R +Q+ +D+ +T + R + Sbjct: 66 DIQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVD 123 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + G + K L G ++ AGTT+E L M + I + Sbjct: 124 FSIGIFEVGTRLLSKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAK 183 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R A+ D + L +P + + S + +GD + Sbjct: 184 DHGESFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPF 243 Query: 238 YNIVSWTHYAMVTAEELG 255 V A + ++ Sbjct: 244 KKAVDDAIVATYKSGDIN 261 >gi|197117373|ref|YP_002137800.1| amino acid ABC transporter amino acid-binding protein [Geobacter bemidjiensis Bem] gi|197086733|gb|ACH38004.1| amino acid ABC transporter, amino acid-binding protein [Geobacter bemidjiensis Bem] Length = 264 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 82/246 (33%), Gaps = 11/246 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L++ S +KK G L G++ G+ GFD Sbjct: 1 MKKILAILSSLLVLTLAVSAFAADGSFKRVKKEGTLTIGLDDAFPPMGYRNDKGELVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + KI++ P AL SK+ D + T R+ + F Sbjct: 61 IDAAEEVGKRLG---IKIKWQPTAWDGVMHALNSKKFDCIWNGMTITDERKKEVA--FTK 115 Query: 121 ITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 D + +K ++ L GA + VQ G++ + A +E Sbjct: 116 PYKMDGQVAVVRFGEKKFKKLADLKGAKVGVQKGSSAVEAVKKLPAA---PAEVREYEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R D D + RP + I+P I+K P A + D E Sbjct: 173 PKALLDLESKRLDTVVIDDAT--GRDFIAKRPGKFQIIPGNITKEPFGVAFRKDDVELRE 230 Query: 240 IVSWTH 245 V T Sbjct: 231 AVQKTL 236 >gi|194099714|ref|YP_002002849.1| Putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae NCCP11945] gi|193935004|gb|ACF30828.1| Putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae NCCP11945] Length = 284 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 110/262 (41%), Gaps = 22/262 (8%) Query: 1 MY-----KDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVG 46 M K S + L S+ A+ + IK++G ++ G+ Sbjct: 1 MKLNAKLKALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V ANG +GFDV+ + L+ + P K++++ A R ++S ++D++ N Sbjct: 61 FGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTQ 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R + F G + K K I+ ++QL ++ V GT + +F Sbjct: 121 TPERAE--AVDFADPYMKVALGVVSPKNKPITDMAQLKDQTLLVNKGTAADA----FFTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + + F++ E A + R A D + L+A + P+ V + ++ + Sbjct: 175 SHPEVKLLKFDQNTETFDALKDGRGVALAHDNALLWAWA--KENPNFEVAIGNLGPAEFI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAM 248 APA+ +G+ + N V+ AM Sbjct: 233 APAVQKGNADLLNWVNGEIAAM 254 >gi|325266789|ref|ZP_08133461.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Kingella denitrificans ATCC 33394] gi|324981721|gb|EGC17361.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Kingella denitrificans ATCC 33394] Length = 293 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 8/227 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L IK G ++ G+ F + ANG +GFDV+ R ++ + P K++++ Sbjct: 47 GDSLARIKAAGVIRIGVFGDKPPFGYLDANGKSQGFDVEIARNMAQDLLGSPDKVEFVLT 106 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 A R ++S ++D+L N T R + F G + K I+S+ QL Sbjct: 107 EAANRVEYIKSGKVDVLLANFTQTPERAEV--VDFAAPYMQVALGVVSPKNAPITSIDQL 164 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G ++ V GTT + F ++ +++ E A + R A D + L+A Sbjct: 165 KGKTLLVNKGTTADAY----FTKNHSDITLQKYDQNTETFDALKDGRGVALAHDNALLWA 220 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + P+ V + + +APA+ +GD V+ AM Sbjct: 221 WA--KENPNFDVAIGKLGEPENIAPAVQKGDQALLAWVNSEITAMKQ 265 >gi|319407433|emb|CBI81084.1| amino-acid ABC transporter binding protein [Bartonella sp. 1-1C] Length = 301 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 97/248 (39%), Gaps = 6/248 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + I + + L IK+ G + G+ G A NG + GF Sbjct: 1 MRKSFLIFIAAIFMGSTNIAHATNDTLEKIKRTGEITLGVRESS-GLAYALGNGKYTGFH 59 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + + + I P K+ Y P+ ++ R L++ D +T R Sbjct: 60 TEMAERIINDISKKIGQPIKVHYQPITSQNRIPLLKNGTYDFECGSTTNDSARSKEAA-- 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F TY + ++ K GI S+ L+G + GTT + + N+ + + + Sbjct: 118 FAYTTYVESVKIVVKKNSGIQSIDDLNGKKVATTTGTTAVQLIRKNKRQKNIHFEVVNGK 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + + R DA+ D S L A + PS+++IL +S P+A + D + Sbjct: 178 DHGDSFLSLESGRADAFVMDTSILSAHIAKSRNPSDYIILDTTLSVEPIACMLRLNDKNF 237 Query: 238 YNIVSWTH 245 ++ + Sbjct: 238 EQTINDSI 245 >gi|224367959|ref|YP_002602122.1| GltB1 [Desulfobacterium autotrophicum HRM2] gi|223690675|gb|ACN13958.1| GltB1 [Desulfobacterium autotrophicum HRM2] Length = 290 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 98/250 (39%), Gaps = 7/250 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++ + FTS + L I G G + F A + GF Sbjct: 1 MRKPLLFGTILMLFMVFTSGAFAGDTLKKISDSNKFIVGARDGAIPFGFHNAENEHVGFS 60 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 +D + L A+ P + + +N K R + + ++++ T+ RE + Sbjct: 61 IDLAKELHKALEERLGKPLEFEIKVVNPKTRIPLVANGNLNMVCGAATHTVPRE--DTVD 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH--NMKYHPIV 175 F + G + K G LSG I G+T E T+ + ++ N +V Sbjct: 119 FSLTFFLTGSQLLAKKSGGYMVAKDLSGKKIGAAQGSTNEKTIRNLNESGYFNPPVKLVV 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + A R +AY GD S L +K P +VIL +++S P + + D+ Sbjct: 179 YQEHTQGMLALRNGAINAYCGDGSHLAGMKAKAMDPDNYVILGELLSYDPYGFILPENDS 238 Query: 236 EWYNIVSWTH 245 + + V+ Sbjct: 239 NFKDFVNEQL 248 >gi|327393114|dbj|BAK10536.1| glutamate/aspartate periplasmic- binding protein precursor GltI [Pantoea ananatis AJ13355] Length = 298 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 82/226 (36%), Gaps = 6/226 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 + L I G + G V F+ G+ + A++ AI +I+ Sbjct: 26 SGTLKKINDNGVIVIGHRESSVPFSYYDNQQKVVGYSQAYSNAIAEAIKAKLNKPDLQIK 85 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T L R+ F + G ++ K I Sbjct: 86 MIPITSQNRIPLLQNGTYDYECGSTTNNLERQKQAA--FSDTIFVIGTRLLVKKGSPIKD 143 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ V +GTT+E+ L M I + + R A+ D + Sbjct: 144 FDDLKGKTVVVTSGTTSEVLLHKLNDEKKMDMRIISAKDHGDSFRTLETGRAVAFMMDDA 203 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L + +P + VI+ SK + + D ++ +V T Sbjct: 204 LLAGERAKAKKPDDWVIIGTPQSKEAYGCMLRKDDPQFKALVDDTI 249 >gi|304405840|ref|ZP_07387498.1| extracellular solute-binding protein family 3 [Paenibacillus curdlanolyticus YK9] gi|304345083|gb|EFM10919.1| extracellular solute-binding protein family 3 [Paenibacillus curdlanolyticus YK9] Length = 283 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 15/261 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS-------TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K + L++ S + + IKK ++ GI F A+ Sbjct: 1 MKKAIAGILSILLLAGLVGCSSSNDGKSAESGSIAAIKKADTIRIGIFADDAPFCYQDAD 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G +KG+DVD + ++ + D +KI ++ +N +R LQ+ + D++ + T R Sbjct: 61 GTFKGYDVDLGKRIAKELLGDENKISWVVVNPADRIPYLQTDKADLMLADFTVTEERAK- 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F G + K I+SV L G ++ V GTT + F + Sbjct: 120 -SVDFTLPYEKVSLGVVSKDKAPINSVDDLKGKTLAVNTGTTADSY----FTKNYPDVKL 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + A R DA+ D + L + V + ++ +K +A A+ QG Sbjct: 175 IKIDAITDGYQALITGRADAFAQDNTLLLSWA--KKNEGYTVGVKELGNKDYIAGAVKQG 232 Query: 234 DTEWYNIVSWTHYAMVTAEEL 254 + E + V+ + E Sbjct: 233 NKELLDYVNDLIKGKLKDENF 253 >gi|257057662|ref|YP_003135494.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Saccharomonospora viridis DSM 43017] gi|256587534|gb|ACU98667.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Saccharomonospora viridis DSM 43017] Length = 324 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 89/223 (39%), Gaps = 9/223 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S + IK+RG L G++ F G GFD+D R ++ A+ + + + Sbjct: 79 GSTMAKIKERGHLIVGVDQNTYLFGFPDPETGKLSGFDIDIARKIAEALLGNADAVHFKA 138 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 +++ ER AL++ +DI+ R T + + F + Y GQ ++ +S Sbjct: 139 ISSAERIDALRNGDVDIVVRTFSITC--DRLEDINFSTVYYVAGQRVLVPVGSTARGLSD 196 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L +C +T+ +A A + P+ + + + + DA + D + L Sbjct: 197 LGDKRVCAAKDSTSLRNIA----ASRPRPIPVAVDDWSDCLVLLQQGQVDAISTDDTILA 252 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L+ + + I+ + +K I + + + V+ Sbjct: 253 GLRAQDRTGT--KIVGEPFTKEYYGIGIPKENEDMVRFVNAVL 293 >gi|78357806|ref|YP_389255.1| extracellular solute-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220211|gb|ABB39560.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 275 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 103/251 (41%), Gaps = 11/251 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V++ + +F S + + I + ++ GI T + A G+W GFD Sbjct: 1 MRMAKIVALAVAMTMFVASAAFAGPVYDKIMQTKKVRVGIMTDSIPGAFYNEKGEWVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D ++ + + ++ +N + R LQ +IDI N T R+ + F Sbjct: 61 YDIATEVAKRMGVEIDRVA---VNNQTRISFLQQGRIDISVANMTHTRERDK--SIDFSI 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN---MKYHPIVFE 177 +FDGQ + K + +S++ + G I GTT+EL L KA + I ++ Sbjct: 116 TYFFDGQKVLAKKGQF-TSLNDMVGKKIATMQGTTSELNLKAALKAAGDPDYDKNVISYQ 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + A ++ R ++ D + L P + ++ D +S P + Q D+ Sbjct: 175 KESQCFQALQSGRVAGWSTDATILLGYAS--KTPGAYELVGDFLSDEPYGMGLPQDDSAL 232 Query: 238 YNIVSWTHYAM 248 + V+ M Sbjct: 233 RDAVNMAIQDM 243 >gi|238762870|ref|ZP_04623838.1| Glutamate/aspartate periplasmic-binding protein [Yersinia kristensenii ATCC 33638] gi|238698881|gb|EEP91630.1| Glutamate/aspartate periplasmic-binding protein [Yersinia kristensenii ATCC 33638] Length = 304 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 45/228 (19%), Positives = 83/228 (36%), Gaps = 6/228 (2%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSK 77 +A L IK G + G V F+ G+ D+ + AI + Sbjct: 30 ASADTLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIKKKLNAPDLQ 89 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ +P+ ++ R LQ+ D +T L R AF + G + K I Sbjct: 90 VKLIPITSQNRIPLLQNGTFDFECGSTTNNLER--QQQAAFSNTIFVVGTRLLTKKGSEI 147 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L+G + V +GTT+E+ L + NM I + + + R A+ D Sbjct: 148 KDFKDLAGKPVVVTSGTTSEVLLNKLNEKDNMNMRIISAKDHGDSFRTLESGRAVAFMMD 207 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + L + +P + I+ S+ + + D + ++ T Sbjct: 208 DALLAGERAKAKKPDQWDIVGTPQSQEAYGCMLRKNDPAFKALLDETI 255 >gi|187920635|ref|YP_001889667.1| family 3 extracellular solute-binding protein [Burkholderia phytofirmans PsJN] gi|187719073|gb|ACD20296.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 291 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 93/254 (36%), Gaps = 7/254 (2%) Query: 7 VSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 +++ ++ ++ + S L I+ + G V F+ V N GF D C Sbjct: 1 MALATFAVVSTSASAQETQSTLAKIRSGNSISIGHRETSVPFSYVDTNNQVIGFSQDICN 60 Query: 66 ----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 A+ + ++++P+ ++ R +Q+ +D+ T R +AF Sbjct: 61 RIIDAVKAKTGHPDLHVRFIPVTSQNRIPLVQNGTVDLECGVTTNLTSR--QNQVAFSDT 118 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + + K GI + L+G ++ GTT+E L + M I + E Sbjct: 119 FFVATTRLLTRKDSGIKDFTDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGE 178 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 R AY D L + +P++ VI+ S + + D E+ +V Sbjct: 179 GRVTLETGRAVAYMMDDVLLAGARSLTAKPADWVIVGAPQSSEAYGFMLRKDDPEFKRLV 238 Query: 242 SWTHYAMVTAEELG 255 ++ E+ Sbjct: 239 DDAMVRVMKGSEIK 252 >gi|148652493|ref|YP_001279586.1| extracellular solute-binding protein [Psychrobacter sp. PRwf-1] gi|148571577|gb|ABQ93636.1| extracellular solute-binding protein, family 3 [Psychrobacter sp. PRwf-1] Length = 334 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 48/243 (19%), Positives = 87/243 (35%), Gaps = 7/243 (2%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDD-- 74 + + ++ L IK G + G + F+ + G+ D + A+ D Sbjct: 49 AANADASATLNKIKDSGTIVVGFRDSSIPFSYIADDPNQPLGYAHDLEMKVVDAVKDKLN 108 Query: 75 --PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 KI+Y + ++ R +Q+ ID +T R+ + F + G + Sbjct: 109 MPDLKIRYNLITSQTRIPLVQNGTIDFECGSTTNNEERQKQVA--FSNGFFEIGTRLLTK 166 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K GI+ L G ++ AGTT+E + Y + I + E R D Sbjct: 167 KDSGINDFEDLKGRTLVTTAGTTSERYIRQYNDEKKLGAKIISAKDHGEAFLMLEKGRAD 226 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A+ D L K + P E I+ S + + D ++ IV + + Sbjct: 227 AFMMDDVLLAGEKAKSAHPEEWQIVGTPQSFEIYGCMMRKDDPQFKAIVDEALKNVYASG 286 Query: 253 ELG 255 E+ Sbjct: 287 EIN 289 >gi|291326463|ref|ZP_06124623.2| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Providencia rettgeri DSM 1131] gi|291314316|gb|EFE54769.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Providencia rettgeri DSM 1131] Length = 288 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 91/241 (37%), Gaps = 10/241 (4%) Query: 13 IILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +++ + + A L IK G + G V F+ + G+ D+ A+ Sbjct: 1 MMILGATCAVQAEELNGTLKKIKDNGVIVVGHRESSVPFSYYDNSQKVVGYSQDYSNAIV 60 Query: 69 SAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 A+ +++ +P+ ++ R LQ+ D +T + R+ F + Sbjct: 61 DAVKKKLNMPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSNTIFV 118 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 G + G+ + L+G ++ V +GTT+E+ L NMK I + + Sbjct: 119 VGTRLLTKGDSGVKDFADLAGKNVVVTSGTTSEILLNQLNDEKNMKMRIISAKDHGDSFR 178 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + R A+ D + L + +P I+ ++ + + D ++ ++ T Sbjct: 179 TLESGRAVAFMMDDALLAGERAKAKKPDIWEIVGKPQTEEAYGCMLRKDDPQFKALIDET 238 Query: 245 H 245 Sbjct: 239 I 239 >gi|298488720|ref|ZP_07006749.1| glutamate/aspartate periplasmic binding protein precursor [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156793|gb|EFH97884.1| glutamate/aspartate periplasmic binding protein precursor [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 304 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 88/258 (34%), Gaps = 8/258 (3%) Query: 4 DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDV 61 + ++ F+ L IK+ G + G + F+ + A+G G+ Sbjct: 6 HLLGVTITAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSH 65 Query: 62 DFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D + AI D K++Y + ++ R +Q+ +D+ +T + R + Sbjct: 66 DIQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVD 123 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + G + K L G ++ AGTT+E L M + I + Sbjct: 124 FSIGIFEVGTRLLSKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAK 183 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R A+ D + L +P + + S + +GD + Sbjct: 184 DHGESFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPF 243 Query: 238 YNIVSWTHYAMVTAEELG 255 V A + ++ Sbjct: 244 KKAVDDAIIATYKSGDIN 261 >gi|146339752|ref|YP_001204800.1| glutamate/aspartate periplasmic-binding protein [Bradyrhizobium sp. ORS278] gi|146192558|emb|CAL76563.1| Putative extracellular solute-binding protein, family 3 ; putative glutamate/aspartate periplasmic-binding protein [Bradyrhizobium sp. ORS278] Length = 302 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 90/252 (35%), Gaps = 9/252 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M ++ + L +K+ G + G + F+ + N G Sbjct: 1 MKTSRLLAYALFATMLAAPALAEDLTGTLQKVKETGTITIGYRETSLPFSYIDDNQKPLG 60 Query: 59 FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 F +D C + + + D +++ P+++ R + + ID+ +T L R+ Sbjct: 61 FALDICGKIVDEIKATLKLDKLEVKLTPVSSATRIPLMANGTIDLECASTTNNLERQRL- 119 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 ++F + ++ G+ ++ L G ++ +GT+ L + A + + + Sbjct: 120 -VSFSHTYFLTASRYVAKAASGLKTIDDLKGKTVASTSGTSNIKQLYEANTARQLGLNIV 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQG 233 + E R DAY D L L + PS++ I D P + + Sbjct: 179 AAKDNAEGFLMVENGRADAYVMDDILLAGLVASAKAPSDYAISTDQFSMPEPYGIMLRKD 238 Query: 234 DTEWYNIVSWTH 245 D + +V Sbjct: 239 DPAFKTVVDRAT 250 >gi|170293734|gb|ACB12919.1| glutamate-sensitive fluorescent reporter [synthetic construct] Length = 841 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 92/248 (37%), Gaps = 6/248 (2%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 +++L F + + S L I K G + G V F+ G+ D+ A+ A+ Sbjct: 256 MVLLEFVTAARMLSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAV 315 Query: 72 FDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 +++ +P+ + R LQ+ D +T + R+ F + G Sbjct: 316 KKKLNKPDLQVKLIPITTQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGT 373 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + K I + L ++ V +GTT+E+ L + M I + + Sbjct: 374 RLLTKKGGDIKDFANLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLE 433 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 + R A+ D + L + +P I+ S+ + + D ++ ++ T Sbjct: 434 SGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQ 493 Query: 248 MVTAEELG 255 + T+ E Sbjct: 494 VQTSGEAE 501 >gi|329666779|gb|AEB92727.1| ABC transporter solute-binding component [Lactobacillus johnsonii DPC 6026] Length = 262 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 91/259 (35%), Gaps = 9/259 (3%) Query: 1 MYKDFF---VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + I+ L + + IK RG L G++ V + +G Sbjct: 1 MKKIIRFLGLLIIVLTSVGLAGCQRQENSWQAIKSRGTLVIGVDDSFVPMDFRQKDGKLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+ I P + ++ + L++ ID++ T RE +A Sbjct: 61 GFDVDLAKAVCKEIGLKPD---FQTIDWSMKETELRNGTIDVIWNGYTKTKAREK--KVA 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-PIVF 176 F + Q + K +GI++ Q+ G + VQ G++ L +Y K + +++ Sbjct: 116 FSKPYLENDQILVTRKNEGINNYRQMRGKILGVQTGSSGTDDLDNYPKVLKKRVKSTVLY 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +A R D D + E + I + D Sbjct: 176 DTYNNAFIDLKAGRIDGLLIDGVYANYYLAHSKYQKEFKKEKLPYPSEKFSVGINKKDKT 235 Query: 237 WYNIVSWTHYAMVTAEELG 255 N ++ + EL Sbjct: 236 LKNKINQALDHLEKTGELK 254 >gi|294497132|ref|YP_003560832.1| glutamine ABC transporter glutamine-binding protein GlnH [Bacillus megaterium QM B1551] gi|294347069|gb|ADE67398.1| glutamine ABC transporter, glutamine-binding protein GlnH [Bacillus megaterium QM B1551] Length = 271 Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 99/241 (41%), Gaps = 11/241 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDP 75 + S L +IK RG + G+ F G+ +GFDVD + L+ I D Sbjct: 31 TSGSSAKKDALTEIKDRGKIVIGVKNDTRLFGLKNPKTGEVEGFDVDISKQLAKEILGDE 90 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +K+++ + +K R LQ ID + T R+ + F + + GQ ++ K Sbjct: 91 NKVEFKEVTSKTRVPLLQKGDIDAVVATMTITDERKK--EVDFTDVYFQAGQSLLVKKGS 148 Query: 136 GISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I SV L G + G+T+ + + + + FE E A ++ + DA Sbjct: 149 KIKSVDDLKKGTKVLAVKGSTSAINIREKAPE----TTVLEFENYAEAFTALKSKQGDAL 204 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D + LY + D + ++ ++ P A+ +G+ E + ++ + + + Sbjct: 205 TTDDAILYGM---ADEDPSYELVGKPFTEEPYGIAVKKGNKELVDALNDALKKIKDSGKY 261 Query: 255 G 255 Sbjct: 262 D 262 >gi|308174443|ref|YP_003921148.1| glutamine ABC transporter glutamine-binding lipoprotein [Bacillus amyloliquefaciens DSM 7] gi|307607307|emb|CBI43678.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus amyloliquefaciens DSM 7] Length = 275 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 99/251 (39%), Gaps = 19/251 (7%) Query: 6 FVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDW 56 +S+L + +L T L IK R + G+ T F + GD Sbjct: 12 LISLLAVFMLAACGGKETSGDSKGTGKDTLASIKDRDKIIFGVKTDTRLFGLKNPSSGDI 71 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFD+D + ++ I D K ++ + +K R LQ+ ID ++ T R+ + Sbjct: 72 EGFDIDIAKQIAKDILGDEKKAEFKEVTSKTRIPMLQNGDIDAITATMTITDERKK--EV 129 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + + GQ ++ K I S L G+ + G+T+ + + + Sbjct: 130 DFSDVYFEAGQSLLVKKGSSIKSTEDLKKGSKVLAVKGSTSSQNIREKAP----DASVLE 185 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 FE E A +A + DA T D + LY + N ++ + + P A+ +G + Sbjct: 186 FENYAEAFTALKAGQGDALTTDNAILYGMADENK---QYQLTGGTFTDEPYGIAVKKGQS 242 Query: 236 EWYNIVSWTHY 246 ++ + Sbjct: 243 GLVKEINASLK 253 >gi|300705512|ref|YP_003747115.1| glutamate/aspartate ABC transporter periplasmic-binding protein [Ralstonia solanacearum CFBP2957] gi|299073176|emb|CBJ44534.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum CFBP2957] Length = 301 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 85/242 (35%), Gaps = 6/242 (2%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIFD 73 L I+ + G+ + F+ + GF D C A+ + Sbjct: 23 AQAQALDGTLKKIQDSNTILIGVREASIPFSYRDSKNQIVGFSADLCARVIEAVKQKVGK 82 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 ++Q +P+ ++ R +Q+ +D+ T RE AF + + Sbjct: 83 PDLQVQQIPVTSQNRTALVQNGSVDLECGVTTHLKSRE--QQTAFSTTFFIAATRLLTSV 140 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 G+ L+G S+ AGTT+E L M + + + E ++ R A Sbjct: 141 NSGVKDFPDLAGKSVITNAGTTSERILRKMNDEKKMNMNVVSGKDYGESFLTLQSGRVQA 200 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D L + +P++ V+ S + + D ++ +V T ++ E Sbjct: 201 FMMDDVLLAGARTLAQKPADWVVTGTPQSFEAYGFMLRRDDPQFKKLVDDTLTGVMKRGE 260 Query: 254 LG 255 + Sbjct: 261 IN 262 >gi|22125092|ref|NP_668515.1| glutamate and aspartate transporter subunit [Yersinia pestis KIM 10] gi|45440928|ref|NP_992467.1| glutamate and aspartate transporter subunit [Yersinia pestis biovar Microtus str. 91001] gi|51595455|ref|YP_069646.1| glutamate and aspartate transporter subunit [Yersinia pseudotuberculosis IP 32953] gi|108808475|ref|YP_652391.1| glutamate and aspartate transporter subunit [Yersinia pestis Antiqua] gi|108811264|ref|YP_647031.1| glutamate and aspartate transporter subunit [Yersinia pestis Nepal516] gi|145599901|ref|YP_001163977.1| glutamate and aspartate transporter subunit [Yersinia pestis Pestoides F] gi|149365484|ref|ZP_01887519.1| putative amino acid-binding protein precursor [Yersinia pestis CA88-4125] gi|153950913|ref|YP_001401882.1| glutamate and aspartate transporter subunit [Yersinia pseudotuberculosis IP 31758] gi|162419470|ref|YP_001606323.1| glutamate and aspartate transporter subunit [Yersinia pestis Angola] gi|165925198|ref|ZP_02221030.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165937719|ref|ZP_02226281.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|166008368|ref|ZP_02229266.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166212590|ref|ZP_02238625.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167399290|ref|ZP_02304814.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422521|ref|ZP_02314274.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423472|ref|ZP_02315225.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467950|ref|ZP_02332654.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis FV-1] gi|170025231|ref|YP_001721736.1| glutamate and aspartate transporter subunit [Yersinia pseudotuberculosis YPIII] gi|186894486|ref|YP_001871598.1| glutamate and aspartate transporter subunit [Yersinia pseudotuberculosis PB1/+] gi|218929696|ref|YP_002347571.1| glutamate and aspartate transporter subunit [Yersinia pestis CO92] gi|229838162|ref|ZP_04458321.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895954|ref|ZP_04511124.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis Pestoides A] gi|229898727|ref|ZP_04513872.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229901502|ref|ZP_04516624.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis Nepal516] gi|294504419|ref|YP_003568481.1| putative amino acid-binding protein precursor [Yersinia pestis Z176003] gi|21957947|gb|AAM84766.1|AE013722_5 solute-binding periplasmic protein of glutamate/aspartate ABC transporter [Yersinia pestis KIM 10] gi|45435787|gb|AAS61344.1| putative amino acid-binding protein precursor [Yersinia pestis biovar Microtus str. 91001] gi|51588737|emb|CAH20348.1| ABC transporter, periplasmic glutamate/aspatate binding protein [Yersinia pseudotuberculosis IP 32953] gi|108774912|gb|ABG17431.1| amino acid-binding protein precursor [Yersinia pestis Nepal516] gi|108780388|gb|ABG14446.1| putative amino acid-binding protein precursor [Yersinia pestis Antiqua] gi|115348307|emb|CAL21238.1| putative amino acid-binding protein precursor [Yersinia pestis CO92] gi|145211597|gb|ABP41004.1| amino acid-binding protein precursor [Yersinia pestis Pestoides F] gi|149291897|gb|EDM41971.1| putative amino acid-binding protein precursor [Yersinia pestis CA88-4125] gi|152962408|gb|ABS49869.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pseudotuberculosis IP 31758] gi|162352285|gb|ABX86233.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis Angola] gi|165914469|gb|EDR33084.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|165922805|gb|EDR39956.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165992750|gb|EDR45051.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166206521|gb|EDR51001.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166958535|gb|EDR55556.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051794|gb|EDR63202.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057642|gb|EDR67388.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751765|gb|ACA69283.1| extracellular solute-binding protein family 3 [Yersinia pseudotuberculosis YPIII] gi|186697512|gb|ACC88141.1| extracellular solute-binding protein family 3 [Yersinia pseudotuberculosis PB1/+] gi|229681431|gb|EEO77525.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis Nepal516] gi|229688275|gb|EEO80346.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229694528|gb|EEO84575.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700877|gb|EEO88906.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis Pestoides A] gi|262362591|gb|ACY59312.1| putative amino acid-binding protein precursor [Yersinia pestis D106004] gi|262366405|gb|ACY62962.1| putative amino acid-binding protein precursor [Yersinia pestis D182038] gi|294354878|gb|ADE65219.1| putative amino acid-binding protein precursor [Yersinia pestis Z176003] gi|320016181|gb|ADV99752.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 305 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 93/257 (36%), Gaps = 15/257 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K + +L + + + +A L +K G + G V F+ Sbjct: 3 MRK-LALVLLLAGMTSSVAQAEDATAKADTAIDTLQKVKNNGVIVVGHRESSVPFSYYDN 61 Query: 53 NGDWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 G+ D+ + AI + +++ +P+ ++ R LQ+ D +T L Sbjct: 62 QQKVVGYSQDYSNLIVDAIRKELNAPNLEVKLIPITSQNRIPLLQNGTFDFECGSTTNNL 121 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R AF + G + K + L+G ++ V +GTT+E+ L + N Sbjct: 122 ER--QQQAAFSNTIFVVGTRLLTKKDSEVKDFKDLAGKAVVVTSGTTSEVLLNKLNEKDN 179 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 M I + + + R A+ D + L + +P E I+ S+ Sbjct: 180 MNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDEWSIVGTPQSEEAYGC 239 Query: 229 AIIQGDTEWYNIVSWTH 245 + + D + ++ T Sbjct: 240 MMRKNDPAFKALLDKTI 256 >gi|229010071|ref|ZP_04167285.1| hypothetical protein bmyco0001_5390 [Bacillus mycoides DSM 2048] gi|229165583|ref|ZP_04293358.1| hypothetical protein bcere0007_5650 [Bacillus cereus AH621] gi|228617890|gb|EEK74940.1| hypothetical protein bcere0007_5650 [Bacillus cereus AH621] gi|228751204|gb|EEM01016.1| hypothetical protein bmyco0001_5390 [Bacillus mycoides DSM 2048] Length = 259 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 93/239 (38%), Gaps = 11/239 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK 77 + + + IKKRG L G+ F + G +GFD+D +AL+ I D K Sbjct: 17 TNTKQGGAVEQIKKRGKLVVGVKNDTNLFGLKNPSTGQVEGFDIDIAKALAKKILGDEKK 76 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ + +K R L++ ID + T R+ + F + + GQ ++ K I Sbjct: 77 LELKEVTSKTRIPMLKNGDIDAIIATMTITEERKK--EVDFSDVYFKAGQSLLVKKGSNI 134 Query: 138 SSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 S+ + G + G+T+ + + FE E A +A + D T Sbjct: 135 KSIDDIKQGVKVLAVKGSTSTNNIRQKSPEA----TVLEFENYSEAFTALKAGKGDVLTT 190 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + LY + + + ++ I + P A+ +G + ++ M E Sbjct: 191 DNAILYGMAKQDSN---YEVVGKIFTDEPYGIAVQKGADDLTKEINSLLKDMKANGEYD 246 >gi|307708313|ref|ZP_07644780.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus mitis NCTC 12261] gi|307615759|gb|EFN94965.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus mitis NCTC 12261] Length = 264 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + +L + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLLGLAAAKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF+++K I S+ L+G +I V G+ T+ + + K +K+ + Sbjct: 116 FTSPYYTDASGFLVNKSAKIKSIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L V+L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISKRT-----VLLDDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAM 248 + + Sbjct: 231 NDYLDNLVTKW 241 >gi|46202161|ref|ZP_00208410.1| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Magnetospirillum magnetotacticum MS-1] Length = 542 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 107/253 (42%), Gaps = 6/253 (2%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++ L + A L + G L GI + + G+ +D C Sbjct: 1 MAALVVFASLPALAEDLAGTLKKVGDSGTLTLGIRESSYPLSYLDDGQKPIGYHIDICTR 60 Query: 67 LSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 L+ A+ K++ LP+ ++ R +Q+ +D+ +T R + F P T Sbjct: 61 LAEAVKTRLALPALKVETLPVTSQNRIPLVQNGTVDLECGSTTNNEARARQVA--FAPTT 118 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + + K GI+S++QL+G + + GTT+ + + K N+ + I + + Sbjct: 119 FVTKVRMAVKKSSGITSIAQLAGKPVAITTGTTSVQLVRAHKKGQNVAFKEIYGKDHADS 178 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R A+ D + L L T+ P ++ I+ +++S P+A + + D ++ +V Sbjct: 179 FLLLETDRAVAFVMDDNLLAGLIATSKAPGDYAIVGEVLSVEPIAIMLRRDDPQFKALVD 238 Query: 243 WTHYAMVTAEELG 255 T AM+ + E+ Sbjct: 239 DTVKAMMASGEVE 251 >gi|73537816|ref|YP_298183.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72121153|gb|AAZ63339.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 311 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 93/254 (36%), Gaps = 8/254 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 ++ +L + L + +L I+ G + G + F+ G G+ V Sbjct: 19 FRPLTALLLAVATLSPLGARAQSPVLDKIRDSGTIVLGYRESALPFSFADDKGQPAGYAV 78 Query: 62 DFCRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D C ++ A + K+++LPL + RF A+ + +D+ +L R+ + Sbjct: 79 DLCLRVAEAARQKLGLKDIKVRWLPLTPQNRFPAVVNGLVDLDCAPNTNSLERQKQVA-- 136 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y ++ GI S L G ++ AG+T + + Y + + Sbjct: 137 FSVSHYVSTVRMLVRADSGIQSFEDLRGKTVVTSAGSTGDRHVRRL--KQQYGYRDVYAK 194 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R A+ D L L+ PS+ VI+ +S A + + D EW Sbjct: 195 DHGESFLLLESGRAQAFVMDDVLLAGLRARAKDPSQFVIVGPALSTEQNALMMSKADPEW 254 Query: 238 YNIVSWTHYAMVTA 251 V T Sbjct: 255 KRFVDQTLAGTFAG 268 >gi|83746634|ref|ZP_00943684.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|207727924|ref|YP_002256318.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|207742329|ref|YP_002258721.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] gi|83726768|gb|EAP73896.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|206591166|emb|CAQ56778.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|206593719|emb|CAQ60646.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] Length = 298 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 96/255 (37%), Gaps = 8/255 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M ++L + + ++ L IK G + G+ + F+ G Sbjct: 1 MNLAKLATVLAAVGVLSSAAHAQELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIG 60 Query: 59 FDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + A+ D +++ +P+ ++ R LQ+ ID+ +T L R+ Sbjct: 61 YSYDVATKIVEAVKDQLKLKDLQVKEIPVTSQNRITLLQNGTIDLECGSTTNNLERQK-- 118 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 +F + G ++ K GI + L G ++ AGTT+E L + + I Sbjct: 119 QASFTDTIFIIGTRIMVKKDSGIKDWADLKGKNVVTTAGTTSERLLRKMNDDKQLGMNII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D + LY + P++ V++ S+ + + D Sbjct: 179 STKDHGQSFLTLESGRAVAFMMDDALLYGERAKAKNPADWVVVAKPQSREAYGCMLRKDD 238 Query: 235 TEWYNIVSWTHYAMV 249 + + T M+ Sbjct: 239 APFKTLADKTIAGMM 253 >gi|302386907|ref|YP_003822729.1| extracellular solute-binding protein family 3 [Clostridium saccharolyticum WM1] gi|302197535|gb|ADL05106.1| extracellular solute-binding protein family 3 [Clostridium saccharolyticum WM1] Length = 289 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 105/258 (40%), Gaps = 23/258 (8%) Query: 1 MYKDFFVSILCLIILF---------------FTSFSTNASILGDIKKRGFLKCGINTGLV 45 M K +L + + S A L +IK+ G +K G+ + Sbjct: 1 MKKKILGVLLGVTLAAGLLAGCSQAKDNPGTTGGASAKARTLSEIKEDGTIKIGVFSDKN 60 Query: 46 GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 F V +NG +G+DV F + L+ + K +++ + A R L+S ++D++ N Sbjct: 61 PFGYVDSNGKIQGYDVYFAKRLAKDLLGSEDKAEFVYVEAASRVEYLKSAKVDVILANFT 120 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 T R+ + F G + IS V+QL ++ V GTT E F Sbjct: 121 VTDERKE--QVDFALPYMKVALGVVSPDAALISDVTQLKDKTLIVVKGTTAETY----FS 174 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 ++ + + F+ +E A R DA++ D + + A V + I + Sbjct: 175 ENHQEVKLLKFDEYQEAYDALLDGRGDAFSTDNTEVLAWA--LQNKGFTVGIESIGNLDT 232 Query: 226 LAPAIIQGDTEWYNIVSW 243 +APA+ +G+ E + ++ Sbjct: 233 IAPAVQKGNKELLDWINS 250 >gi|295702498|ref|YP_003595573.1| glutamine ABC transporter glutamine-binding protein GlnH [Bacillus megaterium DSM 319] gi|294800157|gb|ADF37223.1| glutamine ABC transporter, glutamine-binding protein GlnH [Bacillus megaterium DSM 319] Length = 271 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 100/241 (41%), Gaps = 11/241 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDP 75 + S L +IK RG + G+ F G+ +GFDVD + L+ I D Sbjct: 31 TSGSSAKKDALTEIKDRGKIVIGVKNDTRLFGLKNPKTGEVEGFDVDISKQLAKEILGDE 90 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +K+++ + +K R LQ ID + T R+ + F + + GQ ++ K Sbjct: 91 NKVEFKEVTSKTRVPLLQKGDIDAVVATMTITDERKK--EVDFTDVYFQAGQSLLVKKGS 148 Query: 136 GISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I SV L G + G+T+ + + + + FE E A ++ + DA Sbjct: 149 KIKSVDDLKKGTKVLAVKGSTSAINIREKAPE----TTVLEFENYAEAFTALKSKQGDAL 204 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T D + LY + D + ++ ++ P A+ +G+ E + ++ + + + Sbjct: 205 TTDDAILYGM---ADEDPSYELVGKPFTEEPYGIAVKKGNKELVDALNDALKKIKDSGKY 261 Query: 255 G 255 G Sbjct: 262 G 262 >gi|163791792|ref|ZP_02186170.1| hypothetical protein CAT7_03744 [Carnobacterium sp. AT7] gi|159872938|gb|EDP67064.1| hypothetical protein CAT7_03744 [Carnobacterium sp. AT7] Length = 260 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 86/253 (33%), Gaps = 9/253 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + I+ + T IK+ G L G++ +NGD GFD Sbjct: 5 MTKVVLGLGMVGILAGCGAEETAKDSFDQIKEEGTLVVGLDDTFAPMGFRDSNGDIVGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + ++++ ++ + L+S ID++ T R+ + F Sbjct: 65 VDLANVVAEKL---DVEVEFQAIDWALKETELKSDNIDVIWNGYTITDERKK--QVDFSS 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK---AHNMKYHPIVFE 177 + Q I+ + I + LSG + Q ++ + +++ Sbjct: 120 PYLENSQIIIVLEDSDIQTKEDLSGKVVAAQQSSSAVDAINADESKIIEKFANQEVVLYP 179 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 ++ + R DA D + + + + +L + A + D + Sbjct: 180 SNNDVFNDLASGRSDAIVVDETLGR-YYMKQNEEISYRVLEGNFGEEEYAVGTRKEDDKL 238 Query: 238 YNIVSWTHYAMVT 250 ++ M T Sbjct: 239 TEAINDALDEMKT 251 >gi|27382711|ref|NP_774240.1| ABC transporter amino-acid-binding protein [Bradyrhizobium japonicum USDA 110] gi|27355883|dbj|BAC52865.1| ABC transporter amino-acid-binding protein [Bradyrhizobium japonicum USDA 110] Length = 303 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 98/260 (37%), Gaps = 9/260 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + +++ ++ L +IK G + G + F+ + N G Sbjct: 1 MKHFRHIGLALAATFVVSQAGAQELTGTLKNIKDTGAITLGFRDSSIPFSYLDDNQKPIG 60 Query: 59 FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 F +D C A+ + D +++ P+ + R + + ID+ +T R+ + Sbjct: 61 FAMDICYKIVDAVKKELKLDKLEVKLNPVTSATRIPLMANGTIDLECGSTTNNADRQKQV 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + ++ K G+ S+ L G ++ AGTT L + A + + I Sbjct: 121 A--FTNTHFLTASRYVFKKSSGLKSIDDLKGKTVVSTAGTTNIKQLTEANVAKGLGANII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQG 233 + E R A+ D L +L + P ++VI D SK P + + Sbjct: 179 PAKDHAESFLMVETDRAVAFVMDDILLASLVAGSKSPDDYVISKDAFSKPEPYGIMLRKD 238 Query: 234 DTEWYNIVSWTHYAMVTAEE 253 D + +V A+ T+ E Sbjct: 239 DAPFKKVVDAATAALYTSGE 258 >gi|317047307|ref|YP_004114955.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316948924|gb|ADU68399.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 308 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 85/236 (36%), Gaps = 6/236 (2%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSK 77 S L I K G + G V F+ G+ D+ A+ AI + Sbjct: 34 QQVSTLEKISKNGVIVVGHRESSVPFSYYDNEQKVVGYSQDYSNAIVEAIKKKLNKPDLQ 93 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ LP+ ++ R LQ+ D +T L R AF + G ++ K I Sbjct: 94 VKMLPITSQNRIPLLQNGTFDFECGSTTNNLER--QQQAAFSDTIFVVGTRLLVKKGGPI 151 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + L G ++ V +GTT+E+ L + M I + + R A+ D Sbjct: 152 KDFADLKGKTVVVTSGTTSEILLNKLNDSQKMGMRIISAKDHGDSFRTLETGRAVAFMMD 211 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + L + +P IL S + + D E+ ++ T T+ E Sbjct: 212 DALLAGERAKAKKPDNWEILGTPQSHEAYGCMLRKNDPEFKKLMDDTIAQAQTSGE 267 >gi|218887872|ref|YP_002437193.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758826|gb|ACL09725.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 275 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 11/251 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +++ + + S + + I+K ++ GI T + A G+W GFD Sbjct: 1 MRLVKLLAMASALTVLMASVAMAGPVFDRIQKEKKIRIGIMTDSIPGAFYNEKGEWGGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D ++ + + ++Q +N K R +QS QID+ N T R+ + F Sbjct: 61 YDMATEVAKRMGVEIERVQ---VNNKTRIALVQSGQIDLSVSNMTHTRERDK--SVDFSL 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY---HPIVFE 177 +FDGQ + K + SV + G I GTT+E+ + K + I F+ Sbjct: 116 TYFFDGQKILAKKGQF-KSVKDMVGKKIATMQGTTSEVNVRRALKEAGDPNAETNVISFQ 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + E A + R ++ D S L P + ++ D +S P A+ Q D+ Sbjct: 175 KESECFQALQNGRVAGWSTDASILVGYAA--KTPGQFELVGDFLSDEPYGMAMPQDDSAL 232 Query: 238 YNIVSWTHYAM 248 + V+ M Sbjct: 233 RDAVNAAIQDM 243 >gi|70732196|ref|YP_261952.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] gi|68346495|gb|AAY94101.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] Length = 304 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 86/241 (35%), Gaps = 7/241 (2%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPS-- 76 + L IK+ G + G + F+ + A+G G+ D + AI D Sbjct: 23 AAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPVGYSHDIQLKIVEAIKKDLDMP 82 Query: 77 --KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K++Y + ++ R +Q+ +D+ +T + R + F + G + K Sbjct: 83 DLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVDFSVGIFEIGTRLLSKKD 140 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + L G ++ AGTT+E L M + I + E + R A+ Sbjct: 141 SSYKDFADLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAF 200 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L +P++ + S + +GD + V A + E+ Sbjct: 201 MMDDALLAGEMAKAKKPTDWAVTGTPQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGEI 260 Query: 255 G 255 Sbjct: 261 N 261 >gi|319762438|ref|YP_004126375.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|330825711|ref|YP_004389014.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans K601] gi|317116999|gb|ADU99487.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|329311083|gb|AEB85498.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus denitrificans K601] Length = 300 Score = 152 bits (383), Expect = 8e-35, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 101/261 (38%), Gaps = 9/261 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L+ F A L IK G + G+ + + A+G GF Sbjct: 1 MKKYL--AACALVAQGFLHVPVQAQTLEKIKASGAVTMGVRDSSIPLSYAGADGAPIGFH 58 Query: 61 VDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD CR + + + + +Y + ++ R + + IDI +T T R+ + Sbjct: 59 VDICRKVLEDVQAQLGLARLETRYQLVTSQNRIPLVANGTIDIECGSTTNTQARQKEVA- 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F TY + + GI SV L+G + GTT+ L + ++ + Sbjct: 118 -FALTTYVEEVRLAVRADSGIRSVRDLAGKVVVATTGTTSVQHLRRKVRELGLELKDVSL 176 Query: 177 -ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R DA+ D L A + S ++ ++++ P+A + + D Sbjct: 177 GKDHADSFLLLESGRADAWVLDQGVLRASIANARQSSAFSVVGEVLNAEPIAIMVRKDDP 236 Query: 236 EWYNIVSWTHYAMVTAEELGI 256 + V T ++ + E+ + Sbjct: 237 GFKRAVDVTIRKLLASGEMQV 257 >gi|328554362|gb|AEB24854.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus amyloliquefaciens TA208] gi|328912766|gb|AEB64362.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus amyloliquefaciens LL3] Length = 275 Score = 152 bits (383), Expect = 8e-35, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 99/251 (39%), Gaps = 19/251 (7%) Query: 6 FVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDW 56 +S+L + +L T L IK R + G+ T F + GD Sbjct: 12 LISLLAVFMLAACGGKETAGDSKGTGKDTLASIKDRDKIIFGVKTDTRLFGLKNPSSGDI 71 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFD+D + ++ I D K ++ + +K R LQ+ ID ++ T R+ + Sbjct: 72 EGFDIDIAKQIAKDILGDEKKAEFKEVTSKTRIPMLQNGDIDAITATMTITDERKK--EV 129 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + + GQ ++ K I S L G+ + G+T+ + + + Sbjct: 130 DFSDVYFEAGQSLLVKKGSSIKSTEDLKKGSKVLAVKGSTSSQNIREKAP----DASVLE 185 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 FE E A +A + DA T D + LY + N ++ + + P A+ +G + Sbjct: 186 FENYAEAFTALKAGQGDALTTDNAILYGMADENK---QYQLTGGTFTDEPYGIAVKKGQS 242 Query: 236 EWYNIVSWTHY 246 ++ + Sbjct: 243 GLVKEINASLK 253 >gi|121610312|ref|YP_998119.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121554952|gb|ABM59101.1| extracellular solute-binding protein, family 3 [Verminephrobacter eiseniae EF01-2] Length = 278 Score = 152 bits (383), Expect = 8e-35, Method: Composition-based stats. Identities = 62/246 (25%), Positives = 104/246 (42%), Gaps = 7/246 (2%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 V++L L+ + FTS +A L D+ KRG+L G F G+ +GFDVD R Sbjct: 10 LVAVLTLLGMCFTSL-AHADKLADVLKRGYLIVGTTGSSPPFGFKDEKGELQGFDVDMSR 68 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ A+F DP K++++ L + R+ ALQ+ Q+D++++ T R + +G F P + Sbjct: 69 LIAKALFGDPQKVKFVLLGNEARWTALQTDQVDMVAQFATITPERLVRVG--FTPRYFDT 126 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G ++ K I S + L A + + T E D K F V++ A Sbjct: 127 GMTVVVRKDSKIKSFADLDSADVTIATLTVPEQI--DLVKRMAPNARVASFATVDQQFLA 184 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R+ R A+ D+ T+ + D A G+ W + Sbjct: 185 LRSGRVQAFLVDLPIGMWYGATSPDARVIPGVYDGFQN--YGIAYKLGELSWKQFLDGFV 242 Query: 246 YAMVTA 251 + T Sbjct: 243 TDLTTG 248 >gi|229056415|ref|ZP_04195828.1| hypothetical protein bcere0026_5420 [Bacillus cereus AH603] gi|228720889|gb|EEL72438.1| hypothetical protein bcere0026_5420 [Bacillus cereus AH603] Length = 259 Score = 152 bits (383), Expect = 8e-35, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 93/239 (38%), Gaps = 11/239 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK 77 + + + IKKRG L G+ F + G +GFD+D +AL+ I D K Sbjct: 17 TNTKQGGAVEQIKKRGKLVVGVKNDTNLFGLKNPSTGQVEGFDIDIAKALAKKILGDEKK 76 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ + +K R L++ ID + T R+ + F + + GQ ++ K I Sbjct: 77 LELKEVTSKTRIPMLKNGDIDAIIATMTITEERKK--EVDFSDVYFKAGQSLLVKKGSNI 134 Query: 138 SSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 S+ + G + G+T+ + + FE E A +A + D T Sbjct: 135 KSIDDVKQGVKVLAVKGSTSTNNIRQKSPEA----TVLEFENYSEAFTALKAGKGDVLTT 190 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + LY + + + ++ I + P A+ +G + ++ M E Sbjct: 191 DNAILYGMAKQDSN---YEVVGKIFTDEPYGIAVQKGADDLTKEINSLLKDMKANGEYD 246 >gi|281411813|ref|YP_003345892.1| extracellular solute-binding protein family 3 [Thermotoga naphthophila RKU-10] gi|281372916|gb|ADA66478.1| extracellular solute-binding protein family 3 [Thermotoga naphthophila RKU-10] Length = 246 Score = 152 bits (383), Expect = 8e-35, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 102/247 (41%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + I+ F+ ++ +IK RG+L G++ F V +G+ GFD Sbjct: 1 MKKLLVVLVLLVSIVIFS------GVIDEIKSRGYLLVGLSADFPPFEFVDESGNIVGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + + ++ + + +L +K+ID++ T R+ + F Sbjct: 55 VDLAKEIARRLGVE---LKIVDMTFDGLIPSLLTKKIDVIISGMTITEERKKVVA--FSD 109 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + GQ ++ K + L G ++ VQ GTT ++ ++ Y + F++ Sbjct: 110 PYFDAGQVIVVRKDSDFRPKTYEDLVGKTVAVQIGTTGDIEVSKY-----EGIKVVRFDK 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R DA D + + + VI ++S A+ + DT+ Sbjct: 165 FTDAFLELKRGRADAVVLD---SATARAFVAKNPDLVISSGVLSSEQYGIAVRKEDTDLL 221 Query: 239 NIVSWTH 245 ++ Sbjct: 222 EFINSVL 228 >gi|328957171|ref|YP_004374557.1| putative amino acid ABC transporter, substrate-binding lipoprotein precursor [Carnobacterium sp. 17-4] gi|328673495|gb|AEB29541.1| putative amino acid ABC transporter, substrate-binding lipoprotein precursor [Carnobacterium sp. 17-4] Length = 265 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 89/266 (33%), Gaps = 19/266 (7%) Query: 1 MYKDFFVSILCL----IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K IL L ++ ++ I + G L G++ +NG+ Sbjct: 1 MKKTLATMILGLGFTVLVAGCSTNEARTDSYDQIIEEGKLIVGLDDTFAPMGFRDSNGEI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D + + D +++ P++ + L + ID++ T R+ + Sbjct: 61 VGFDIDLANEVGERLDLD---VEFQPIDWALKETELTNGNIDLIWNGYTITDERKK--QV 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD---YFKAHNMKYHP 173 F + Q I+ + I + LSG + Q ++ + Sbjct: 116 DFSSPYLENSQIIIVLEDSEIQTKEDLSGKVVAAQQSSSAVDAINADESNIIEEFANEEV 175 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +++ ++ + R DA D + N+ + +L D + A + + Sbjct: 176 VLYPSNNDVFNDLASERSDAIVVDETLGRYYMNQNED-ISYRVLEDNFGEEEYAVGMRKE 234 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQK 259 D + ++ EE+ Sbjct: 235 DDKLTEAINQAL------EEMKADGT 254 >gi|257455526|ref|ZP_05620758.1| extracellular solute-binding protein, family 3 [Enhydrobacter aerosaccus SK60] gi|257447095|gb|EEV22106.1| extracellular solute-binding protein, family 3 [Enhydrobacter aerosaccus SK60] Length = 359 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 96/278 (34%), Gaps = 26/278 (9%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-------------------ILGDIKKRGFLKCGINT 42 K ++ + ++ L + + L IKK G + G Sbjct: 6 KKPIALATVAIMALGLAGCNKASDNKAVGTEGSQPAAAATGEKTLDKIKKSGEIVLGYRD 65 Query: 43 GLVGFAEV-KANGDWKGFDVDF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 + F+ + G+ D A+ + K++Y + ++ R +Q+ + Sbjct: 66 SSIPFSYIAGTPNQPVGYAHDLQLKIVDAVKKQLNMPDLKVRYNLVTSQTRIPLVQNGTV 125 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 D+ +T R+ + F + G + K GI + L G ++ AGTT+E Sbjct: 126 DLECGSTTNNEERQKQVA--FSNGFFEIGTRLLTAKDSGIKDFADLKGKTLVTTAGTTSE 183 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 + M + + + E + R A+ D L K P++ VI+ Sbjct: 184 RFIKKLNDDKKMGINIVSAKDHGESFLMLESGRAAAFMMDDVLLAGEKAKAKDPNKWVIV 243 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 S + + D+E+ +V A ++ E+ Sbjct: 244 GTPQSYEIYGCMMRKDDSEFKKVVDDALVATYSSGEIN 281 >gi|319899106|ref|YP_004159199.1| amino-acid ABC transporter binding protein [Bartonella clarridgeiae 73] gi|319403070|emb|CBI76625.1| amino-acid ABC transporter binding protein [Bartonella clarridgeiae 73] Length = 301 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 99/248 (39%), Gaps = 6/248 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + I+ + + + L IKK G + G+ G A NG + GF Sbjct: 1 MRKSLLIFIVVISMGLTSIAHATNDTLEKIKKTGEITLGVRESS-GLAYALGNGKYTGFH 59 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + + I P K+ YLP+ ++ R L++ D +T R Sbjct: 60 TEMAERIIDDISKKIGKPIKVNYLPITSQNRIPLLKNGTYDFECGSTTNDSARSKEAA-- 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F TY + ++ K GI S+ L+G ++ GTT + + N+ + + + Sbjct: 118 FAYTTYVESVKIVVKKNSGIKSIDDLNGKTVATTTGTTAVQLIRKNKRQKNIHFKVVNGK 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R DA+ D S L A + PS+++IL +S P+A + D + Sbjct: 178 DHGDSFLLLESGRADAFVMDTSILSANIAKSKNPSDYIILDTTLSVEPIACMLRLNDKNF 237 Query: 238 YNIVSWTH 245 +++ + Sbjct: 238 EQVINDSI 245 >gi|218249147|ref|YP_002374518.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC 8801] gi|218169625|gb|ACK68362.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8801] Length = 299 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 105/256 (41%), Gaps = 11/256 (4%) Query: 1 MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + IL L++ + S +L IK+ G + G + F + G W G+ Sbjct: 1 MGKKVTLFILTLVLATTGQASSWAGQVLEKIKQTGVINAGTRKDAIPFGYINEQGKWVGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D + + P K+ + + ++RF ++ IDI +T +T R + + Sbjct: 61 SLDVLEIIRKDVEKQLGKPIKLNLVEVTTQDRFNKIKDGSIDIECASTTFTWERNKT--V 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G ++ K +GI SV L+G + V TT E + A ++ Sbjct: 119 DFTVSYFASGTKVLVKKDRGIGSVETLAGLKVGVIPKTTNEQAIKIQHPAA----QLVMV 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235 + +E A DA+ D L LK + P+ ++P+ + A I Q + Sbjct: 175 KDRKEGLQKLEAGTIDAFASDGILLEGLKKESSNPNNLEVVPEFPYAYESYACMIPQDQS 234 Query: 236 EWYNIVSWTHYAMVTA 251 +W N+V+++ + Sbjct: 235 QWRNMVNYSLVKFMEG 250 >gi|300705161|ref|YP_003746764.1| glutamate/aspartate ABC transporter periplasmic-binding protein [Ralstonia solanacearum CFBP2957] gi|299072825|emb|CBJ44181.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum CFBP2957] Length = 298 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 96/255 (37%), Gaps = 8/255 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M ++L + + ++ L IK G + G+ + F+ G Sbjct: 1 MNLAKLATVLAAVGVLSSAAHAQELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIG 60 Query: 59 FDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + A+ D +++ +P+ ++ R LQ+ ID+ +T L R+ Sbjct: 61 YSYDVATKIVEAVKDQLKLKDLQVKEIPVTSQNRITLLQNGTIDLECGSTTNNLERQK-- 118 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 +F + G ++ K GI + L G ++ AGTT+E L + + I Sbjct: 119 QASFTDTIFIIGTRIMVKKDSGIKDWADLKGKNVVTTAGTTSERLLRKMNDDKQLGMNII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D + LY + P++ V++ S+ + + D Sbjct: 179 STKDHGQSFLTLESGRAVAFMMDDALLYGERAKAKNPADWVVVAKPQSREAYGCMVRKDD 238 Query: 235 TEWYNIVSWTHYAMV 249 + + T M+ Sbjct: 239 APFKALADKTIAGMM 253 >gi|171059369|ref|YP_001791718.1| extracellular solute-binding protein [Leptothrix cholodnii SP-6] gi|170776814|gb|ACB34953.1| extracellular solute-binding protein family 3 [Leptothrix cholodnii SP-6] Length = 300 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 100/259 (38%), Gaps = 7/259 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L L F T + L I+ G G+ A +G + GF Sbjct: 1 MKKTLMMAAL-LACAFVTGQARAEDTLKKIRDTGSATLGVRESSGALAYTLGDGKYVGFH 59 Query: 61 VDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + + I+Y + ++ R +Q+ +D+ +T R+ + Sbjct: 60 TEMAERILGDIRKQLGLPKLDIKYQVVTSQNRIPLVQNGTVDLECGSTTNNAARQKDVA- 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F TY + GI+ + QLSG ++ GTT+ TL + +A+ + + + Sbjct: 119 -FAVTTYVEEVRIATKVNSGITGIGQLSGRAVATTTGTTSVQTLRRHERANGVDFKEVYG 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R DA+ D L P ++ ++ +++S P+A + + D Sbjct: 178 KDHADSFLLLETGRADAFVMDGQILAGNISRAKNPPDYRLVGEVLSVEPIACVLRRDDPV 237 Query: 237 WYNIVSWTHYAMVTAEELG 255 + V + M+ + EL Sbjct: 238 FKKAVDDSIVGMIRSGELA 256 >gi|302390116|ref|YP_003825937.1| extracellular solute-binding protein family 3 [Thermosediminibacter oceani DSM 16646] gi|302200744|gb|ADL08314.1| extracellular solute-binding protein family 3 [Thermosediminibacter oceani DSM 16646] Length = 278 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 99/273 (36%), Gaps = 32/273 (11%) Query: 3 KDFFVSI-----LCLIILFFTSFSTNAS------------ILGDIKKRGFLKCGINTGLV 45 K FF+++ + +L T AS + IKK G L G + Sbjct: 4 KKFFLTLFILVFITAAVLGVTGCGQKASQDAGSSQVEQQDTVDKIKKAGKLVIGTSADYP 63 Query: 46 GFAEVKANG---DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 F + G + GFD+D +A++ + D ++ + + A+ SK +D+ Sbjct: 64 PFEFHQVTGGKDEIVGFDIDIAKAIAKELGVD---LEIKDMAFESIIPAVLSKTVDLGIA 120 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 T R + F GQ I +K G+ S L+G +I VQ GTT E Sbjct: 121 GFTITEER--LKSVNFSDPYIDGGQQIITYKGSGVKSKEDLNGKTIGVQLGTTGEEIAKK 178 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 A F++V R +A D+ A + P + + + + Sbjct: 179 IEGAK-----LKQFDKVGAAVLDLMNKRVEAVIVDLP--VAQAFVTNNPDKLELAGEPLD 231 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + A I + D + ++V+ + + E Sbjct: 232 DAAKAVVIRKEDQKLLDVVNKVIKDLKDSGEYD 264 >gi|300951156|ref|ZP_07165019.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 116-1] gi|300959230|ref|ZP_07171305.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 175-1] gi|301643929|ref|ZP_07243956.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 146-1] gi|331641159|ref|ZP_08342294.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli H736] gi|300314159|gb|EFJ63943.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 175-1] gi|300449559|gb|EFK13179.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 116-1] gi|301077699|gb|EFK92505.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 146-1] gi|331037957|gb|EGI10177.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli H736] Length = 327 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 55 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 114 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ F + G + K I Sbjct: 115 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 172 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 173 FANLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 232 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 233 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 288 >gi|239816902|ref|YP_002945812.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239803479|gb|ACS20546.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 297 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 104/259 (40%), Gaps = 7/259 (2%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFD 60 +K + +L + + + L IK+ G ++ G + F+ A GF Sbjct: 3 FKLSLAFGASIALLCGAAAAQESPTLRKIKETGTVQIGSRDTQIPFSYKTGAESAPIGFT 62 Query: 61 VDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + C A+ + + +++Y LN+ R +Q+ +D+ T T+ R + Sbjct: 63 NEICLKVVDAIKAKLGLSKIEVRYTLLNSTNRIPLVQNGTVDLDCATTTNTVQR--QQQV 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F P + + K GI+S++ L G ++ AG+T+ L + K N++ I Sbjct: 121 DFAPSHFVTNITAAVKKNSGINSIADLQGKTVATVAGSTSMQLLRGFRKTENIEVQEIAG 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R AY D L L +++ +L D++ + P + + D E Sbjct: 181 KDTADAFLLLASDRAAAYVLDDVQLAGLIANQPNAADYKLLKDVLRQEPYGIMMRKDDPE 240 Query: 237 WYNIVSWTHYAMVTAEELG 255 + IV M+ + + Sbjct: 241 FKAIVDQAVTEMMKSGSID 259 >gi|154686884|ref|YP_001422045.1| GlnH [Bacillus amyloliquefaciens FZB42] gi|154352735|gb|ABS74814.1| GlnH [Bacillus amyloliquefaciens FZB42] Length = 275 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 100/251 (39%), Gaps = 19/251 (7%) Query: 6 FVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDW 56 +S+L + +L T L IK R + G+ T F + GD Sbjct: 12 LISLLAVFMLAACGGKETSGDSKGTGKDTLASIKDRDKIIFGVKTDTRLFGLKNPSSGDI 71 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFD+D + L+ I D K ++ + +K R LQ+ ID ++ T R+ + Sbjct: 72 EGFDIDISKQLAKDILGDEKKAEFKEVTSKTRIPMLQNGDIDAITATMTITDERKK--EV 129 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + + GQ ++ K I S L G+ + G+T+ + + + Sbjct: 130 DFSDVYFEAGQSLLVKKGSSIKSTEDLGKGSKVLAVKGSTSSQNIREKAP----DASVLE 185 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 FE E A +A + DA T D + LY + N ++ + + + P A+ +G + Sbjct: 186 FENYAEAFTALKAGQGDALTTDNAILYGMADENK---QYQLTGETFTDEPYGIAVKKGQS 242 Query: 236 EWYNIVSWTHY 246 ++ + Sbjct: 243 GLIKEINASLK 253 >gi|16128638|ref|NP_415188.1| glutamate and aspartate transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|89107524|ref|AP_001304.1| glutamate and aspartate transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|170080234|ref|YP_001729554.1| glutamate/aspartate ABC transporter periplasmic-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|170080335|ref|YP_001729655.1| glutamate/aspartate ABC transporter periplasmic-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|238899932|ref|YP_002925728.1| glutamate and aspartate transporter subunit [Escherichia coli BW2952] gi|256023733|ref|ZP_05437598.1| glutamate and aspartate transporter subunit [Escherichia sp. 4_1_40B] gi|301028861|ref|ZP_07192037.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 196-1] gi|307137272|ref|ZP_07496628.1| glutamate and aspartate transporter subunit [Escherichia coli H736] gi|2507365|sp|P37902|GLTI_ECOLI RecName: Full=Glutamate/aspartate periplasmic-binding protein; Flags: Precursor gi|1778573|gb|AAB40856.1| hypothetical protein [Escherichia coli] gi|1786876|gb|AAC73756.1| glutamate and aspartate transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|85674732|dbj|BAA35307.2| glutamate and aspartate transporter subunit [Escherichia coli str. K12 substr. W3110] gi|169888069|gb|ACB01776.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|169888170|gb|ACB01877.1| glutamate and aspartate transporter subunit, periplasmic-binding component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|238861328|gb|ACR63326.1| glutamate and aspartate transporter subunit [Escherichia coli BW2952] gi|260450178|gb|ACX40600.1| extracellular solute-binding protein family 3 [Escherichia coli DH1] gi|299878166|gb|EFI86377.1| glutamate-aspartate periplasmic-binding protein [Escherichia coli MS 196-1] gi|315135321|dbj|BAJ42480.1| glutamate and aspartate transporter subunit [Escherichia coli DH1] gi|315616423|gb|EFU97040.1| glutamate/aspartate periplasmic-binding protein [Escherichia coli 3431] gi|323938417|gb|EGB34671.1| bacterial extracellular solute-binding protein 3 [Escherichia coli E1520] gi|323943070|gb|EGB39229.1| extracellular solute-binding protein 3 [Escherichia coli E482] gi|323972110|gb|EGB67324.1| extracellular solute-binding protein 3 [Escherichia coli TA007] Length = 302 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 86/236 (36%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 S L I K G + G V F+ G+ D+ A+ A+ +++ Sbjct: 30 GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R LQ+ D +T + R+ F + G + K I Sbjct: 90 LIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 148 FANLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 208 LLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 263 >gi|289624942|ref|ZP_06457896.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650481|ref|ZP_06481824.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330867232|gb|EGH01941.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 304 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 88/258 (34%), Gaps = 8/258 (3%) Query: 4 DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDV 61 + ++ F+ L IK+ G + G + F+ + A+G G+ Sbjct: 6 HLLGVTITAALISTPIFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSH 65 Query: 62 DFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D + AI D K++Y + ++ R +Q+ +D+ +T + R + Sbjct: 66 DIQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVD 123 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + G + K L G ++ AGTT+E L M + I + Sbjct: 124 FSIGIFEVGTRLLSKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAK 183 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R A+ D + L +P + + S + +GD + Sbjct: 184 DHGESFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPF 243 Query: 238 YNIVSWTHYAMVTAEELG 255 V A + ++ Sbjct: 244 KKAVDDAIVATYKSGDIN 261 >gi|319943773|ref|ZP_08018054.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lautropia mirabilis ATCC 51599] gi|319743006|gb|EFV95412.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lautropia mirabilis ATCC 51599] Length = 274 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 93/239 (38%), Gaps = 8/239 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 ++L ++ + L IK ++ G+ F + + G +GFDV+ Sbjct: 9 LMAALLAAGVVSGSHAMAADDGLARIKASDRIRIGVFGDKPPFGYIDSEGKSQGFDVEIA 68 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + + + P K++Y+ A R L+S ++DI+ N T R + F Sbjct: 69 KDFAKDLLGSPDKVEYVITEAANRVEYLKSGKVDIILANFTQTKERARV--VDFAAPYMK 126 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 G + K I SV++L G ++ V GTT + F + +++ E Sbjct: 127 VSLGVVSPTKAPIKSVNELEGKTLLVNKGTTADAY----FSKKYPDISLLKYDQNTETFD 182 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A + R A D + L+A + P V + + +APA+ +GD + Sbjct: 183 ALKDGRGAALAHDNALLWAWA--KENPGYEVAIGQLGEPEFIAPAVKKGDDALRAWIDQ 239 >gi|94311476|ref|YP_584686.1| extracellular solute-binding protein [Cupriavidus metallidurans CH34] gi|93355328|gb|ABF09417.1| ABC-type transporter, periplasmic component, probable glutamate and aspartate transporter [Cupriavidus metallidurans CH34] Length = 310 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 105/256 (41%), Gaps = 9/256 (3%) Query: 4 DFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 F+S+ L+ + ++ ++ I++ G ++ V F+ + A+G G+ V Sbjct: 17 SVFLSLAALLTPAAIPAAQAASSPVIQRIQQTGTIRIAHRESSVPFSFI-ADGKPVGYAV 75 Query: 62 DFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D C A+ + + +++++P+ R A+ + D+ +T RE +A Sbjct: 76 DLCLKAADAVRAQLKMPQLRVEWVPVTPATRIPAIVDGKADLECGSTTNN--RERREQVA 133 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y G ++ GI S L G ++ GTT + ++ M + + + Sbjct: 134 FTIPHYIAGSRMLVKSDSGIRRWSDLRGKTVVSTTGTTPLAMIRKMDESGAMGWKVLEAK 193 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E A + R DA+ D L+ L+ P+ + D+++ P A + + D E+ Sbjct: 194 DHAEAFAMVESGRADAFVMDDVLLFGLRANAKNPASLAVTGDLLTIEPYAIMLSKQDAEF 253 Query: 238 YNIVSWTHYAMVTAEE 253 IV + +E Sbjct: 254 KKIVDKALVNAIYDQE 269 >gi|218439818|ref|YP_002378147.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] gi|218172546|gb|ACK71279.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] Length = 298 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 101/250 (40%), Gaps = 11/250 (4%) Query: 1 MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 MYK F ++ + L++ + + S +L I++ G + G T + F G+W G+ Sbjct: 1 MYKQFAITAITLLLTVTSQAPSWAGRVLDRIRQTGVITAGARTDAIPFGYKNEKGEWVGY 60 Query: 60 DVDFCRAL---SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D + + P K+Q + + + RF ++ + IDI +T T RE + Sbjct: 61 SLDILELIRQETEKQLGKPIKLQLVEVTPENRFTKIKDQSIDIECGSTTVTWAREK--EV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G ++ K + +V L+G I V TT E + A + Sbjct: 119 DFSVSYFASGTKLLVKKGSQLETVESLAGMRIGVIPNTTNEKAIKFQQPAA----QLVTV 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235 + E D + D L LK T + I+P+ A I Q ++ Sbjct: 175 KDRLEGLQKLEKGEIDGFASDGIILEGLKQTASNSNALEIVPEYPYMYESYACVIPQDES 234 Query: 236 EWYNIVSWTH 245 +W ++V+++ Sbjct: 235 QWRDLVNYSL 244 >gi|330889551|gb|EGH22212.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. mori str. 301020] Length = 304 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 89/254 (35%), Gaps = 7/254 (2%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCR 65 V+I +I + L IK+ G + G + F+ + A+G G+ D Sbjct: 10 VAITAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHDIQL 69 Query: 66 ALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + AI D K++Y + ++ R +Q+ +D+ +T + R + F Sbjct: 70 KIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVDFSIG 127 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + G + K L G ++ AGTT+E L M + I + E Sbjct: 128 IFEVGTRLLSKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGE 187 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + R A+ D + L +P + + S + +GD + V Sbjct: 188 SFQMLESGRAVAFMMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAV 247 Query: 242 SWTHYAMVTAEELG 255 A + ++ Sbjct: 248 DDAIVATYKSGDIN 261 >gi|73540163|ref|YP_294683.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72117576|gb|AAZ59839.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 299 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 94/256 (36%), Gaps = 9/256 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M S++ LF S L IK G + G+ + F Sbjct: 1 MKFAKLASLMMAAGLFCGSAQAAEQLTGTLKKIKDTGVITLGVRDSSIPFNYNLGGVRQV 60 Query: 58 GFDVDF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D A+ + +++ +P+ ++ R LQ+ IDI +T L R+ Sbjct: 61 GYSYDINMKIVEAIKDQLKMPNLQVKEIPITSQNRITLLQNGTIDIECGSTTNNLERQK- 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 ++F + G ++ K GI + L G ++ AGTT+E L + + Sbjct: 120 -QVSFTDSIFIIGTRIMVKKDGGIKDWADLKGKNVVTTAGTTSERLLRKMNDDQKLGMNI 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + + R A+ D + LY + P++ +++ S+ I + Sbjct: 179 ISTKDHGQSFLTLESGRAVAFMMDDALLYGERAKAKNPADWIVVGKPQSREAYGCMIRKD 238 Query: 234 DTEWYNIVSWTHYAMV 249 D ++ + M+ Sbjct: 239 DPQFKKVSDTVIAGMM 254 >gi|207727575|ref|YP_002255969.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|206590813|emb|CAQ56425.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] Length = 301 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 86/242 (35%), Gaps = 6/242 (2%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIFD 73 L I+ + G+ + F+ + GF D C A+ + Sbjct: 23 AQAQALDGTLKKIQDSNTILIGVREASIPFSYRDSKNQIVGFSADLCARVIEAVKQKVGK 82 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 ++Q +P+ ++ R +Q+ +D+ T RE AF + + Sbjct: 83 PDLQVQQIPVTSQNRTALVQNGSVDLECGVTTHLKSRE--QQTAFSTTFFIAATRLLTGV 140 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 G+ L+G S+ AGTT+E L M + + + E ++ R A Sbjct: 141 NSGVKDFPDLAGKSVITNAGTTSERILRKMNDEKKMNMNVVSGKDYGESFLTLQSGRVQA 200 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D L + +P++ V+ S + + D ++ +V T ++ E Sbjct: 201 FMMDDVLLAGARTLAQKPADWVVTGTPQSFEAYGFMLRRDDPQFKKLVDDTLTGVMKRGE 260 Query: 254 LG 255 +G Sbjct: 261 IG 262 >gi|330812332|ref|YP_004356794.1| putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380440|gb|AEA71790.1| putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 300 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 101/263 (38%), Gaps = 10/263 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEV-KANGDW 56 M K + ++L + + A LG I + G V F+ V ++G Sbjct: 1 MQKITLIGCTLSLLLSVQAHANEAPPAGTLGKIASTRSITLGYRDASVPFSYVGDSSGQP 60 Query: 57 KGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ V+ + I ++Y + ++ R +Q+ +D+ +T T R+ Sbjct: 61 MGYSVELAGKIVERIKTQLALSQLDVKYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQK 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F + + K GI S + L G ++ AGTT E L Y + +N + Sbjct: 121 QVA--FSYGFIYVKGQLLTAKDSGIHSFADLRGKNVVTTAGTTNERFLKSYNQDNNAEMF 178 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + E R A+ D + LY + P + V++ S+ + + + Sbjct: 179 IISAKDHGESFQMLETGRAAAFYMDDALLYGERAKARDPHKWVVVGQEQSREIYSCMVRK 238 Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255 D ++ +V+ T + + E+ Sbjct: 239 DDPQFLALVNATLADLYKSGEIN 261 >gi|254492739|ref|ZP_05105910.1| antigenic protein [Neisseria gonorrhoeae 1291] gi|268600327|ref|ZP_06134494.1| antigenic protein [Neisseria gonorrhoeae PID18] gi|268681108|ref|ZP_06147970.1| antigenic protein [Neisseria gonorrhoeae PID332] gi|268685214|ref|ZP_06152076.1| antigenic protein [Neisseria gonorrhoeae SK-92-679] gi|268685588|ref|ZP_06152450.1| antigenic protein [Neisseria gonorrhoeae SK-93-1035] gi|226511779|gb|EEH61124.1| antigenic protein [Neisseria gonorrhoeae 1291] gi|268584458|gb|EEZ49134.1| antigenic protein [Neisseria gonorrhoeae PID18] gi|268621392|gb|EEZ53792.1| antigenic protein [Neisseria gonorrhoeae PID332] gi|268625498|gb|EEZ57898.1| antigenic protein [Neisseria gonorrhoeae SK-92-679] gi|268625872|gb|EEZ58272.1| antigenic protein [Neisseria gonorrhoeae SK-93-1035] Length = 274 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 110/252 (43%), Gaps = 19/252 (7%) Query: 8 SILCLIILFFTSF-----------STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 I + T+ S+ A+ + IK++G ++ G+ F V ANG Sbjct: 1 MASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDANGKN 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDV+ + L+ + P K++++ A R ++S ++D++ N T R + Sbjct: 61 QGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTQTPERAE--AV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G + K K I+ ++QL ++ V GTT + +F + + + F Sbjct: 119 DFADPYMKVALGVVSPKNKPITDMAQLKDQTLLVNKGTTADA----FFTKSHPEVKLLKF 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ E A + R A D + L+A + P+ V + ++ +APA+ +G+ + Sbjct: 175 DQNTETFDALKDGRGVALAHDNALLWAWA--KENPNFEVAIGNLGPAEFIAPAVQKGNAD 232 Query: 237 WYNIVSWTHYAM 248 N V+ AM Sbjct: 233 LLNWVNGEIAAM 244 >gi|104784168|ref|YP_610666.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas entomophila L48] gi|95113155|emb|CAK17883.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas entomophila L48] Length = 290 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 10/220 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK R L G+ T F V +G + GFD D R + + D +K++++ + Sbjct: 41 LETIKARDKLIVGVFTDKPPFGFVDESGRYVGFDTDIGRRFAKELLGDENKVEFVAVEPA 100 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R LQS ++D++ N T R+ + F I+ + + L+ Sbjct: 101 SRIPFLQSDKVDLILANMTVTPERKE--AVDFTNPNLRVAVQAIVADGSPVQKLDDLADK 158 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 +I V GTT ++ L ++ + + FE+ E AA + R +AY D L++ Sbjct: 159 TIIVTTGTTADIWLT----KNHPDWKLLKFEKNTESLAALASGRGEAYAQDNLILFSWAK 214 Query: 207 TNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYNIVSWTH 245 N + +LP ++ + P+APA+ +G+TE + V+ Sbjct: 215 QNPG---YRVLPQLLGEEAPIAPAVKKGNTELRDWVNAEL 251 >gi|323467048|gb|ADX70735.1| Glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus H10] Length = 272 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 98/251 (39%), Gaps = 14/251 (5%) Query: 1 MYKDFFVS--ILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M K FF+S ++ + + ++ S N ++ +K + G+ F + G Sbjct: 1 MKKRFFLSTLLIGITLFTLSACSQNKKQNVYQTVKSTKTINWGVKADTPLFGSMNIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GF++D +AL+ + +K ++ A + L+++ +D + T RE Sbjct: 61 INGFEIDLAKALTKEMLGKNAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPEREK--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + GQ ++ K I +V L+ + V GTT + + + Sbjct: 119 VDFSKPYFPAGQSIMVAKNSKIKNVKDLNNKKVLVVKGTTAADAVKKFAPKA----EILQ 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + AA +A + DA+ D L S + ++ + P A+ +G T Sbjct: 175 FDDYGQAFAALKAGQGDAFVTDNGILVG---ILRDSSGYKLVGGNFTNQPYGIAVNKGQT 231 Query: 236 EWYNIVSWTHY 246 E ++ Sbjct: 232 EMDKQINLALT 242 >gi|83746015|ref|ZP_00943071.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|207741963|ref|YP_002258355.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] gi|83727409|gb|EAP74531.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|206593349|emb|CAQ60276.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] Length = 301 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 86/242 (35%), Gaps = 6/242 (2%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIFD 73 L I+ + G+ + F+ + GF D C A+ + Sbjct: 23 AQAQALDGTLKKIQDSNTILIGVREASIPFSYRDSKNQIVGFSADLCARVIEAVKQKVGK 82 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 ++Q +P+ ++ R +Q+ +D+ T RE AF + + Sbjct: 83 PDLQVQQIPVTSQNRTALVQNGSVDLECGVTTHLKSRE--QQTAFSTTFFIAATRLLTGV 140 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 G+ L+G S+ AGTT+E L M + + + E ++ R A Sbjct: 141 SSGVKDFPDLAGKSVITNAGTTSERILRKMNDEKKMNMNVVSGKDYGESFLTLQSGRVQA 200 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D L + +P++ V+ S + + D ++ +V T ++ E Sbjct: 201 FMMDDVLLAGARTLAQKPADWVVTGTPQSFEAYGFMLRRDDPQFKKLVDDTLTGVMKRGE 260 Query: 254 LG 255 +G Sbjct: 261 IG 262 >gi|268602559|ref|ZP_06136726.1| antigenic protein [Neisseria gonorrhoeae PID1] gi|268586690|gb|EEZ51366.1| antigenic protein [Neisseria gonorrhoeae PID1] Length = 274 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 110/252 (43%), Gaps = 19/252 (7%) Query: 8 SILCLIILFFTSF-----------STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 I + T+ S+ A+ + IK++G ++ G+ F V ANG Sbjct: 1 MASAAIAVGLTACGGGSGDAQSSQSSGAATVAAIKEKGVIRIGVFGDKPPFGYVDANGKN 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDV+ + L+ + P K++++ A R ++S ++D++ N T R + Sbjct: 61 QGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTQTPERAE--AV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G + K K I+ ++QL ++ V GTT + +F + + + F Sbjct: 119 DFADPYMKVALGVVSPKNKPITDMAQLKDQTLLVNKGTTADA----FFTKSHPEVKLLKF 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ E A + R A D + L+A + P+ V + ++ +APA+ +G+ + Sbjct: 175 DQNTETFDALKDGRGVALAHDNALLWAWA--KENPNFEVAIGNLGPAEFIAPAVQKGNAD 232 Query: 237 WYNIVSWTHYAM 248 N V+ AM Sbjct: 233 LLNWVNGEIAAM 244 >gi|238790776|ref|ZP_04634535.1| Glutamate/aspartate periplasmic-binding protein [Yersinia frederiksenii ATCC 33641] gi|238721134|gb|EEQ12815.1| Glutamate/aspartate periplasmic-binding protein [Yersinia frederiksenii ATCC 33641] Length = 312 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 44/228 (19%), Positives = 83/228 (36%), Gaps = 6/228 (2%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSK 77 + L IK G + G V F+ G+ D+ + AI + Sbjct: 38 ASVDTLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIKKKLNAPDLQ 97 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ +P+ ++ R LQ+ D +T L R AF + G + K + Sbjct: 98 VKLIPITSQNRIPLLQNGTFDFECGSTTNNLER--QQQAAFSNTIFVVGTRLLTKKGSEV 155 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L+G ++ V +GTT+E+ L + M I + + + R A+ D Sbjct: 156 KDFKDLAGKAVVVTSGTTSEVLLNKLNEKDKMNMRIISAKDHGDSFRTLESGRAVAFMMD 215 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + L + +P + I+ S+ + + D + N+V T Sbjct: 216 DALLAGERAKAKKPDQWDIVGTPQSQEAYGCMLRKNDPAFKNLVDETI 263 >gi|220924346|ref|YP_002499648.1| family 3 extracellular solute-binding protein [Methylobacterium nodulans ORS 2060] gi|219948953|gb|ACL59345.1| extracellular solute-binding protein family 3 [Methylobacterium nodulans ORS 2060] Length = 301 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 91/256 (35%), Gaps = 7/256 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++ + S L IK+ G + G V F+ + N G+ +D Sbjct: 4 KRLLPLLVAGLAAMPASAEELTGTLKKIKETGAITLGYRDSSVPFSYLDGNQKPVGYAMD 63 Query: 63 FC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C A+ + + +++ P+ + R + + ID+ +T R+ + F Sbjct: 64 ICYKIVEAVKAKLAMPNLEVKLNPVTSATRIPLMANGTIDLECGSTTNNAERQKQVA--F 121 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + F+ K ++ L G ++ +GTT + +Y AH + + Sbjct: 122 TNTHFLTANRFVAKKASNVNKFEDLKGKTVVSTSGTTNIKQINEYNAAHKFGMTILPAKD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEW 237 E R A+ D L +L + P ++I D ISK P + + D + Sbjct: 182 HAEAFLMVETGRAVAFVMDDVLLASLAAGSKEPDAYMISKDAISKPEPYGIMLRKDDAPF 241 Query: 238 YNIVSWTHYAMVTAEE 253 + A + E Sbjct: 242 KKVADEATAAFYRSPE 257 >gi|309777346|ref|ZP_07672307.1| amino acid ABC transporter, amino acid-binding protein [Erysipelotrichaceae bacterium 3_1_53] gi|308914887|gb|EFP60666.1| amino acid ABC transporter, amino acid-binding protein [Erysipelotrichaceae bacterium 3_1_53] Length = 256 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 89/248 (35%), Gaps = 11/248 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + L L T+ ++A D + L GI+ +G GFD Sbjct: 1 MKRIVMTMLALLCTLSLTACGSDAGKGDD---KEVLTIGIDDTFAPMGFK-KDGKLVGFD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A+S I +++ ++ + L+S ID++ T R+ + F Sbjct: 57 VELAEAVSKKIGK---SVEFQNIDWDLKETELESGNIDLIWNGYSITDERKK--QVLFSD 111 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY--FKAHNMKYHPIVFER 178 + Q I K GI + + + G ++ VQ ++ + F A P F+ Sbjct: 112 PYMENRQLIITTDKTGIKAKTDIKGKTLSVQKNSSAYDAVMKDKDFVADLKGGKPTQFDT 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R DA D + D ++V+L + A + + DTE Sbjct: 172 NNDCFMDLESGRSDAIVVDETLARYYMKQQDNGVKYVVLDENFGTEEYAIGMRKDDTELC 231 Query: 239 NIVSWTHY 246 ++ Sbjct: 232 KEINKAMQ 239 >gi|227327385|ref|ZP_03831409.1| glutamate and aspartate transporter subunit [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 298 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 90/259 (34%), Gaps = 6/259 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L A L +K G + G V F+ G+ Sbjct: 3 MRKLALSLLLLGTAASVAQAEDLAGTLKKVKDNGVIVIGHRESSVPFSYYDNTQKVVGYS 62 Query: 61 VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + A+ +++ LP+ ++ R LQ+ D +T L R+ Sbjct: 63 QAYSDKIVEAVKKKLDAPNLQVKLLPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAA- 121 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G + K G+ L+G ++ V +GTT+E+ L + +K I Sbjct: 122 -FSNTIFVVGTRLLTKKDSGVKDFPDLAGKTVVVTSGTTSEVLLNKLNEEKQLKMRIISA 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D + L + + I+ S+ + + D + Sbjct: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKNADQWDIVGKAQSEEAYGCMLRKDDPQ 240 Query: 237 WYNIVSWTHYAMVTAEELG 255 + +V T + T+ E Sbjct: 241 FKKLVDDTIAEVQTSGEAE 259 >gi|197284337|ref|YP_002150209.1| glutamate and aspartate transporter subunit [Proteus mirabilis HI4320] gi|227358519|ref|ZP_03842844.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, substrate-binding protein [Proteus mirabilis ATCC 29906] gi|194681824|emb|CAR41086.1| glutamate/aspartate ABC transporter, substrate-binding protein [Proteus mirabilis HI4320] gi|227161230|gb|EEI46304.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, substrate-binding protein [Proteus mirabilis ATCC 29906] Length = 297 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 89/250 (35%), Gaps = 7/250 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + +S++ L L I + G V F+ G+ Sbjct: 1 MRMRKLALSLMILGAAGAVQAEELTGTLKKINDNDIIIVGHRESSVPFSYYDNQQKVVGY 60 Query: 60 DVD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 D A+ + +++ +P+ ++ R LQ+ D +T L R Sbjct: 61 SQDYSNLIVEAVKEKLGKPNLQVRLIPITSQNRIPLLQNGTFDFECGSTTNNLAR--QQQ 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + G + K GI + L+G ++ V +GTT+E+ L M I Sbjct: 119 ADFSNTIFIVGTRLLAKKDSGIKDFADLAGKNVVVTSGTTSEMLLNKLNDEKKMNMRIIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R A+ D + L + +P+ I+ S+ + +GDT Sbjct: 179 AKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPALWEIVGTPQSEEAYGCMLRKGDT 238 Query: 236 EWYNIVSWTH 245 ++ +++ T Sbjct: 239 QFKSLIDETI 248 >gi|153939947|ref|YP_001389817.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum F str. Langeland] gi|152935843|gb|ABS41341.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum F str. Langeland] gi|295317904|gb|ADF98281.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum F str. 230613] Length = 267 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 88/254 (34%), Gaps = 12/254 (4%) Query: 1 MYKD--FFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K F ++ +I T S + L DI +G G++ G+ Sbjct: 1 MKKKNILFSILIMGLIFMLTGCDNKSKEDTSLKDINAKGEFVVGLDDSFPPMGFKNDKGE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D + ++ + + + P+ L+L +K ID++ T R+ Sbjct: 61 IVGFDIDLAKEVAKKMGVK---VVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKE--Q 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + Q +++ I S L+ ++ +Q G+++E+ L Sbjct: 116 INFSKPYVENKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKDFVKSLKELKK 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E +A R D + + + +P+ +L + + D Sbjct: 176 YSNNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGVGFRKTDN 233 Query: 236 EWYNIVSWTHYAMV 249 + V ++ Sbjct: 234 SFREAVDKALDEVI 247 >gi|170755905|ref|YP_001780101.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum B1 str. Okra] gi|169121117|gb|ACA44953.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum B1 str. Okra] Length = 267 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 88/254 (34%), Gaps = 12/254 (4%) Query: 1 MYKD--FFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K F ++ +I T S + L DI +G G++ G+ Sbjct: 1 MKKKNILFSILIMGLIFMLTGCDNKSKEDTSLKDINAKGEFVVGLDDSFPPMGFKNDKGE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D + ++ + + + P+ L+L +K ID++ T R+ Sbjct: 61 IVGFDIDLAKEVAKKMGVK---VVFKPVQWDGVVLSLNNKDIDVIWNGLTITEKRKE--Q 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + Q +++ I S L+ ++ +Q G+++E+ L Sbjct: 116 INFSKPYVENKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVALDSDKDFVKSLKELKK 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E +A R D + + + +P+ +L + + D Sbjct: 176 YSNNTEALMDLQAKRVD--AVVVDEVVGRYYISKKPNVFKVLDEDFGGESYGVGFRKTDN 233 Query: 236 EWYNIVSWTHYAMV 249 + V ++ Sbjct: 234 SFREAVDKALDEVI 247 >gi|124265636|ref|YP_001019640.1| amino-acid ABC transporter binding protein [Methylibium petroleiphilum PM1] gi|124258411|gb|ABM93405.1| amino-acid ABC transporter binding protein [Methylibium petroleiphilum PM1] Length = 297 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 104/259 (40%), Gaps = 10/259 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L T + L +K G + G+ + + G+ Sbjct: 1 MKKSLLILVTALAA---TGLAQAEDTLKKVKDSGAITLGVRESSGVLSYTLGGAKYVGYH 57 Query: 61 VDFCRA----LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 V C + A+ K+ Y P+ ++ R +Q+ +D+ +T R+ + Sbjct: 58 VAICEKAVEDIEKAV-GRKLKVNYQPVTSQNRIPLVQNGTVDLECGSTTNNATRQKDVA- 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F T+ + + GI S++ L G ++ GTT+ TL +A NM++ + Sbjct: 116 -FANTTFVEEVRMAVKTSSGIKSIADLQGKTVATTTGTTSVQTLRKNKRAENMEFKEVFG 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R D + D S L L + P++ I+ +++S P+A + + D Sbjct: 175 KDHSDSFLLVDSGRADVFVMDGSLLAGLIARSKNPADFKIVGEVLSVEPIAIMMRKDDEA 234 Query: 237 WYNIVSWTHYAMVTAEELG 255 +V+ T MV + E+ Sbjct: 235 LLKLVNATIAGMVKSGEIN 253 >gi|291276583|ref|YP_003516355.1| putative amino acid transporter periplasmic solute-binding protein [Helicobacter mustelae 12198] gi|290963777|emb|CBG39612.1| putative amino-acid transporter periplasmic solute-binding protein [Helicobacter mustelae 12198] Length = 272 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 116/248 (46%), Gaps = 11/248 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K F+ I+ + ++F+ S S IK++G L+ G+ + F V A G++ G Sbjct: 1 MKKFAFLFIIFMTMMFWGCSSDKEKQSNFDLIKQKGVLRVGVFSDKPPFGYVDAKGEFDG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV + ++ + + ++++ P+ A R L+S ++D++ N T R + F Sbjct: 61 FDVYIAKRIAKDLLGEKGRVEFYPVEAAARIEFLKSGKVDLIMANFTKTKERAEV--VDF 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G + K I+++SQL ++ V GTT + F ++ + + +++ Sbjct: 119 AKPYMKVSLGVVS-KNGEITTISQLKDQTLIVDRGTTADFY----FSKNHPEVKLLKYDQ 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E A ++ R A D + L+A P V + ++ ++ +APAI++GD ++ Sbjct: 174 NTEAFLALKSDRGVALAHDNTLLFAWAKQ--NPPFAVGIAELGNQDVIAPAIVKGDAKFL 231 Query: 239 NIVSWTHY 246 + ++ Sbjct: 232 DWLNQEIT 239 >gi|120608912|ref|YP_968590.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120587376|gb|ABM30816.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 305 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 58/255 (22%), Positives = 109/255 (42%), Gaps = 8/255 (3%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKGFDVDFC- 64 V CL+ + + L IK+ G + G + F+ K GD GF D C Sbjct: 15 VLGACLLAHGAAASAQEIDTLARIKQTGVIHIGNRDSSIPFSYSPKGGGDPVGFSNDICL 74 Query: 65 ---RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 A+ + + ++QY LN+ R +Q+ +D+ T +++R+ + F P Sbjct: 75 KIVEAVKAKLGLPALRVQYTLLNSLNRIPLMQNGTVDLDCATTTNSVVRQQMVA--FAPS 132 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + G + K GI+S+S L+G ++ AG+T+ L Y +A + + + + Sbjct: 133 HFVAGITVAVKKNSGINSLSDLAGKTVATVAGSTSVQLLRTYKRAEALDVRELSGKDTAD 192 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNI 240 R DAY D L L ++ P E+ +L D++ + P + D ++ + Sbjct: 193 AFLLLANGRADAYVLDDVQLAGLIASSPNPGEYRMLRDVVLRQEPYGIMFRKNDPQFEAL 252 Query: 241 VSWTHYAMVTAEELG 255 V T ++ + E+ Sbjct: 253 VDETVTQLMKSGEME 267 >gi|225019520|ref|ZP_03708712.1| hypothetical protein CLOSTMETH_03473 [Clostridium methylpentosum DSM 5476] gi|224947741|gb|EEG28950.1| hypothetical protein CLOSTMETH_03473 [Clostridium methylpentosum DSM 5476] Length = 282 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 12/247 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK+RG ++ G+ + F + +NG+ +G+DV + L+ + D SK++++ + A Sbjct: 35 LESIKERGTIRIGVFSDKPPFGYIDSNGENQGYDVYLAKRLAKDLLGDESKVEFVLVEAA 94 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R LQS ++D+L N T R + F G ++ K GI+SV QL G Sbjct: 95 SRVEYLQSNKVDLLLANFTVTKERAE--QVDFANPYMKVALGIVL-KDGGITSVDQLKGK 151 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++ V GTT E F + + + F++ E A + R DA D + L+A Sbjct: 152 TLAVNKGTTAETY----FTENYPDINLLKFDQNTETFQALKDGRADALAHDNTLLFAWA- 206 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 N+ V + + S +APA+ +G+ E + V+ E KN + Sbjct: 207 -NENDGFEVGVSSLGSHDTIAPAVKKGNDELRSWVNDEL---AKLGEEKFMHKNYQETLL 262 Query: 267 DTTNPDV 273 D+ Sbjct: 263 PYYGDDI 269 >gi|75765505|pdb|1XT8|A Chain A, Crystal Structure Of Cysteine-Binding Protein From Campylobacter Jejuni At 2.0 A Resolution gi|75765506|pdb|1XT8|B Chain B, Crystal Structure Of Cysteine-Binding Protein From Campylobacter Jejuni At 2.0 A Resolution Length = 292 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 11/250 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 + L IK+ G ++ G+ F V G+ +G+D+ + ++ +F D +K+Q++ + Sbjct: 35 NSLDKIKQNGVVRIGVFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENKVQFVLVE 94 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L+S ++DI+ N T R + F G + K I+SV L Sbjct: 95 AANRVEFLKSNKVDIILANFTQTPQRAE--QVDFCSPYMKVALGVAVPKDSNITSVEDLK 152 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 ++ + GTT + F + + +++ E AA R DA + D + L+A Sbjct: 153 DKTLLLNKGTTADAY----FTQNYPNIKTLKYDQNTETFAALMDKRGDALSHDNTLLFAW 208 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 D P + + ++ +K +APA+ +GD E + + + K ++ Sbjct: 209 --VKDHPDFKMGIKELGNKDVIAPAVKKGDKELKEFIDNLI---IKLGQEQFFHKAYDET 263 Query: 265 SKDTTNPDVQ 274 K DV+ Sbjct: 264 LKAHFGDDVK 273 >gi|167576714|ref|ZP_02369588.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis TXDOH] Length = 299 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 87/261 (33%), Gaps = 8/261 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + + L I+ G + G+ V F+ G Sbjct: 2 MKPFRPLLSIAVGCALAAAAHAEDASPTLKKIRDTGVVTLGVRESSVPFSYYDQRQQTIG 61 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + + + I + ++ +P+ ++ R +Q+ +D+ +T T R + Sbjct: 62 YSQEIALKIVDEIKKELNRTNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 119 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 ++F + G I K G+ L+G ++ AGTT E L + M I Sbjct: 120 QVSFSNSIFQYGMRLIAKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMSMQII 179 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ R A+ D LY K P ++VI + + D Sbjct: 180 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGSSPVSEAYGCMLRKDD 239 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + + M + E Sbjct: 240 PGFKQLADRVIARMQRSGEAE 260 >gi|172060589|ref|YP_001808241.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171993106|gb|ACB64025.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 292 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 62/249 (24%), Positives = 93/249 (37%), Gaps = 11/249 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M + L L +A L DIKK G L+ F V A + G Sbjct: 22 MKIHTLATWLVGAALVTAGTVAHADRLDDIKKAGVLRVATFDSNPPFGYVDAKNNHIVGL 81 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + +Q P N R L S ++D++ N T R + F Sbjct: 82 DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 136 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F+ K + S QL+G + GTT E+TL + F + ++ Sbjct: 137 IPYFSSGQQFLAKKG-VLKSADQLNGLRVGADKGTTNEITLREKFPKA----TIVAYDDT 191 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I IS + + +G+T Sbjct: 192 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 251 Query: 240 IVSWTHYAM 248 V+ T + Sbjct: 252 FVNDTLKGL 260 >gi|121593036|ref|YP_984932.1| extracellular solute-binding protein [Acidovorax sp. JS42] gi|120605116|gb|ABM40856.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax sp. JS42] Length = 299 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 105/254 (41%), Gaps = 8/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + ++ ++F+ L IK G + G+ G NG + GF Sbjct: 1 MKKHLLAAAITVLA-AGSAFAQANDTLAKIKSTGAVTLGVRESS-GLGYTLGNGKYVGFH 58 Query: 61 VDFCRALSS----AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + + + +I+Y P+ ++ R + + +DI +T R+ + Sbjct: 59 TEMGERILADIQKQLGLANMEIKYQPVTSQNRIPLVTNGTVDIECGSTTNNTARQKEVA- 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F TY + ++ K GI+ + L+G +I GTT+ TL + +A + + ++ Sbjct: 118 -FAVTTYVEEVRIAVNAKSGITGIKDLNGKTIVTTTGTTSVQTLRKHKRADGLNFKEVMG 176 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R DA+ D S L A + PS+ I+ +++S P+A I + D Sbjct: 177 KDHADSFLMLETGRADAFIMDGSILAANISKSKNPSDFKIVGEVLSVEPIACMIRKDDPA 236 Query: 237 WYNIVSWTHYAMVT 250 + V + + Sbjct: 237 FKKAVDDSIKRQIA 250 >gi|304317592|ref|YP_003852737.1| extracellular solute-binding protein family 3 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779094|gb|ADL69653.1| extracellular solute-binding protein family 3 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 258 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 100/260 (38%), Gaps = 16/260 (6%) Query: 1 MYKDFFVSILCLIILFF-TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K +S+ +++L S + S L +KK G + G + F V Sbjct: 1 MKKVLIISLSLIVMLSIILSGCSKQSTLSRVKKSGVIVMGTSADFPPFEFHKVVNGKDTI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD A++ + ++ ++ ALQS QID+ + T R+ + Sbjct: 61 MGFDVDLANAIAKKLGVK---LEIKDMDFTGLIPALQSGQIDMAIAGMNATPDRKK--NV 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y Q ++ I+++ L+G ++ VQ GTT+ D + Sbjct: 116 DFSDEYYNSEQVLVVKSSSSINNLKDLNGKTVAVQLGTTS-----DDAAKKIKGINLNEL 170 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDT 235 R+ + + R DA + + A + + + +I P + A+ +G+ Sbjct: 171 NRLGDAFLSLENGRVDAILMESTIANAYLKEYKD-MKMLHVKEINEAVPGYSVAVAKGNQ 229 Query: 236 EWYNIVSWTHYAMVTAEELG 255 + N ++ + + E G Sbjct: 230 DLVNQINSVIKELKDSGEYG 249 >gi|206560032|ref|YP_002230796.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] gi|198036073|emb|CAR51967.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] Length = 271 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 62/249 (24%), Positives = 95/249 (38%), Gaps = 11/249 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + + L + L + +A L DIKK G L+ F V A G Sbjct: 1 MKINTLATWLIGVALVTAGTAAHADRLDDIKKAGVLRVATFDSNPPFGYVDAKSNHIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + +Q P N R L S ++D++ N T R + F Sbjct: 61 DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F+ K + S QL+G + GTT E+TL + F + ++ Sbjct: 116 IPYFSSGQQFLAKKG-VLKSADQLNGLRVGADKGTTNEITLREKFPKA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I IS + + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 230 Query: 240 IVSWTHYAM 248 V+ T + Sbjct: 231 FVNDTLKGL 239 >gi|238920803|ref|YP_002934318.1| glutamate/aspartate periplasmic-binding protein [Edwardsiella ictaluri 93-146] gi|238870372|gb|ACR70083.1| glutamate/aspartate periplasmic-binding protein [Edwardsiella ictaluri 93-146] Length = 300 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 92/245 (37%), Gaps = 7/245 (2%) Query: 14 ILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 + T + + S L IK G + G V F+ G+ D+ A+ A+ Sbjct: 17 LFATTQGAADGSPTLQKIKDSGVIVVGHRESSVPFSYYDNQQRVVGYSQDYANAIVDAVK 76 Query: 73 DD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +++ LP+ ++ R LQ+ D+ +T R +AF + G Sbjct: 77 KQLNLPTLQVKLLPITSQNRIPLLQNGTYDVECGSTTHNAER--QQQVAFSNTLFIVGTR 134 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + ++ G+ L+G + V +GTT+E+ L + M+ I + + + Sbjct: 135 LLTARESGVHDFRDLAGKPVVVTSGTTSEIMLNRMNEKDGMQMRIISAKDHGDAFRTLES 194 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R A+ D + L + +P VI+ S + + D + + T + Sbjct: 195 GRAVAFMMDDALLAGERAKAKQPERWVIVGTPQSYEAYGCMLRRDDPAFKKLADDTIAHV 254 Query: 249 VTAEE 253 T+ + Sbjct: 255 QTSGQ 259 >gi|227114975|ref|ZP_03828631.1| glutamate and aspartate transporter subunit [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 298 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 89/259 (34%), Gaps = 6/259 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L A L +K G + G V F+ G+ Sbjct: 3 MRKLALSLLLLGTAASVAQAEDLAGTLKKVKDNGVIVIGHRESSVPFSYYDNTQKVVGYS 62 Query: 61 VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + A+ +++ LP+ ++ R LQ+ D +T L R+ Sbjct: 63 QAYSDKIVEAVKKKLDAPNLQVKLLPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAA- 121 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G + K G+ L+G ++ V +GTT+E+ L + +K I Sbjct: 122 -FSNTIFVVGTRLLTKKDSGVKDFPDLAGKTVVVTSGTTSEVLLNKLNEEKQLKMRIISA 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D + L + + I+ S+ + + D + Sbjct: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKNADQWDIVGKAQSEEAYGCMLRKDDPQ 240 Query: 237 WYNIVSWTHYAMVTAEELG 255 + +V T + + E Sbjct: 241 FKKLVDDTIAEVQASGEAE 259 >gi|167838586|ref|ZP_02465445.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis MSMB43] Length = 299 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 87/261 (33%), Gaps = 8/261 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + + L ++ G + G+ V F+ G Sbjct: 2 MKPLRPLLSIAIGCALAAAAHADDASPTLKKVRDTGVVTLGVRESSVPFSYYDQQQQTIG 61 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + + + I + ++ +P+ ++ R +Q+ +D+ +T T R + Sbjct: 62 YSQEIALKIVDEIKKELNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 119 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 ++F + G I+ K G+ L+G ++ AGTT E L + M I Sbjct: 120 QVSFSNSIFQYGMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMSMQII 179 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D LY K P ++ I + + + D Sbjct: 180 SAKDHADAFLNVKNGRAVAFFMDEPLLYGAKAKEANPGDYAITGNSPVSEAYGCMLRKDD 239 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + + M + E Sbjct: 240 PGFKQLADRVIARMQRSGEAE 260 >gi|325518275|gb|EGC98022.1| extracellular solute-binding protein [Burkholderia sp. TJI49] Length = 271 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 59/253 (23%), Positives = 96/253 (37%), Gaps = 11/253 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + L + L + +A L DI+K G L+ F V A G Sbjct: 1 MKIHTLAAWLVGVALVTAGTAAHADRLDDIRKAGVLRVATFDSNPPFGYVDAKSNHIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +A++ + +Q P N R L S ++D++ N T R + F Sbjct: 61 DVDYAKAIADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F+ K + S QL+G + GTT E+TL + + + + ++ Sbjct: 116 IPYFSSGQQFLAKKG-VLKSADQLNGLRVGADKGTTNEITLREKYPSA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I IS + + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 230 Query: 240 IVSWTHYAMVTAE 252 V+ T + + Sbjct: 231 FVNDTLKGLEASG 243 >gi|260102758|ref|ZP_05752995.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] gi|260083428|gb|EEW67548.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] Length = 272 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 94/251 (37%), Gaps = 14/251 (5%) Query: 1 MYKDFFVSIL----CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M K FF+S L L L S + ++ +K + G+ F + G Sbjct: 1 MKKRFFLSTLLIGIALFTLSACSQNKKQNVYQTVKSTKTINWGVKADTPLFGSMNIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GF++D +AL+ + +K ++ A + L+++ +D + T RE Sbjct: 61 INGFEIDLAKALTKEMLGKNAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPEREK--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + GQ ++ K I +V L+ + V GTT + + + Sbjct: 119 VDFSKPYFPAGQSIMVAKNNKIKNVKDLNNKKVLVVKGTTAADAVKKFAPKA----EILQ 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + A +A + DA+ D L S + ++ + P A+ +G T Sbjct: 175 FDDYGQAFTALKAGQGDAFVTDNGILVG---ILRDSSGYKLVGGNFTNQPYGIAVNKGQT 231 Query: 236 EWYNIVSWTHY 246 E ++ Sbjct: 232 EMDKQINLALT 242 >gi|307710649|ref|ZP_07647082.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus mitis SK564] gi|307618592|gb|EFN97735.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus mitis SK564] Length = 264 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 104/251 (41%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLAATKPVQADTSVADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 116 FTNPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L V+L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYISKRT-----VLLDDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAM 248 + + Sbjct: 231 SDYLDTLVTKW 241 >gi|300718266|ref|YP_003743069.1| polar amino acid ABC transporter, periplasmic ligand binding protein [Erwinia billingiae Eb661] gi|299064102|emb|CAX61222.1| polar amino acid ABC transporter, periplasmic ligand binding protein [Erwinia billingiae Eb661] Length = 271 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 65/246 (26%), Positives = 101/246 (41%), Gaps = 11/246 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ +++ L +L T+A L DIK RG L GI + + A G GF+ Sbjct: 1 MKRN--RALMALSLLIMAPVITHADTLSDIKSRGVLTVGIKNDYPPYGFMNAEGKTVGFE 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD R++++ + P KI+ +P+NA R LQS QID++ T R + F Sbjct: 59 VDLARSIAANLLGSPDKIKLVPVNASNRIQFLQSGQIDLIMATLGVTPERAK--EIDFTV 116 Query: 121 ITYF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G + K+ + QL G IC G+ TL + F + Sbjct: 117 EYVSAAGPSVMARKEAKFNQWEQLKGQKICGIQGSYYNKTLTQ-----KYGIQLVNFTAL 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + +RC A D L KL S++ I P+A + +GD + N Sbjct: 172 PEAYRALQDNRCVAMVFDDMTLQ-NKLGEPGWSDYKIAIKPYEFLPMAGGLRKGDEAFKN 230 Query: 240 IVSWTH 245 V+ Sbjct: 231 AVNAAI 236 >gi|259909117|ref|YP_002649473.1| glutamate and aspartate transporter subunit [Erwinia pyrifoliae Ep1/96] gi|224964739|emb|CAX56256.1| Glutamate/aspartate periplasmic-binding protein [Erwinia pyrifoliae Ep1/96] gi|283479144|emb|CAY75060.1| putative glutamate/aspartate ABC transport system, periplasmic component [Erwinia pyrifoliae DSM 12163] Length = 309 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 52/270 (19%), Positives = 94/270 (34%), Gaps = 20/270 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-------------ILGDIKKRGFLKCGINTGLVGF 47 M L L + + L I K G + G V F Sbjct: 1 MKFRKLGLCLALAGIASGIAHAEDAKAPAAADAQQQTHTLEKIAKSGVIVVGHRESSVPF 60 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRN 103 + G+ D+ A+ +AI +++ LP+ ++ R LQ+ D + Sbjct: 61 SYYHNQQKVVGYSQDYSDAIVAAIKKKLNKPDLQVKMLPVTSQNRIPLLQNGTYDFECGS 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T + R+ +F + G ++ K I + L G ++ V +GTT+E+ L Sbjct: 121 TTNNIERQK--QASFSNSIFVVGTRLLVKKGGVIKEFADLKGKTVVVTSGTTSEILLNKL 178 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 M + + + + R A+ D + L + +PSE IL S Sbjct: 179 NDEQKMGIRIVSAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPSEWEILGTPQSH 238 Query: 224 SPLAPAIIQGDTEWYNIVSWTH-YAMVTAE 252 + +GD E+ ++ T A + E Sbjct: 239 EAYGCMLRKGDNEFKKLMDDTIVQAQTSGE 268 >gi|319791947|ref|YP_004153587.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315594410|gb|ADU35476.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 304 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 56/234 (23%), Positives = 104/234 (44%), Gaps = 5/234 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81 L ++ G + G V F+ + A + G+ ++ CRAL +AI + I+++ Sbjct: 36 GTLAKARETGAITIGYRESSVPFSYLNARKEPIGYSIELCRALVTAIEDTVNKSLTIKWV 95 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ + R A+ S Q+D+ +T L R+ ++F P + G ++ K I S Sbjct: 96 PVTSDSRIDAVASGQVDLECGSTTNNLERQKR--VSFSPTMFVSGTKVLVKKGAPIKSFR 153 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + V AGTT E TL D + + + V E ++ + DA+ D L Sbjct: 154 DLAGKKVAVTAGTTNEKTLRDLSEKFKLGINLQVARDHAESFGLVKSGQADAFATDDVLL 213 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 Y L + +++ ++ D +S P +GD + +V+ T + E+ Sbjct: 214 YGLIAQDAAKADYEVVGDFLSYDPYGIMYRKGDAQLAKVVNDTFQVLAEDGEIE 267 >gi|241114113|ref|YP_002973588.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] gi|240868686|gb|ACS66344.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 295 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 97/259 (37%), Gaps = 8/259 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ L + ++ + L IK+ G + G + F + + G+ Sbjct: 1 MIR--LLAFAALATVLGSATAQETGTLAKIKQTGVMTLGAREASIPFNYLDDHQRQAGYA 58 Query: 61 VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + ++ A+ +I+ + L + R + ++ +D+ +T L R+ + Sbjct: 59 WELSTRIADAVKRQLKLPKLEIKEINLTPQTRVALVANQTVDLECSSTTNNLERQKQVA- 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G ++ K GI + L G ++ V AGTT E L + + I+ Sbjct: 118 -FSNTFFIVGARLLVRKNSGIQHWADLIGKNVVVSAGTTGERLLRKLNVENRWGINIILA 176 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + E R A D LY+ PS ++ + + + D Sbjct: 177 KDINENFLTVETGRAVASMQDDIILYSNIARAKDPSMWEVVGMPQQREAYGCMLRKDDPA 236 Query: 237 WYNIVSWTHYAMVTAEELG 255 + +V T AM+ + E+ Sbjct: 237 FKKLVDDTIAAMMKSGEME 255 >gi|240850842|ref|YP_002972242.1| glutamate-aspartate ABC transporter periplasmic component GltI [Bartonella grahamii as4aup] gi|240267965|gb|ACS51553.1| glutamate-aspartate ABC transporter periplasmic component GltI [Bartonella grahamii as4aup] Length = 301 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 103/258 (39%), Gaps = 6/258 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + I I F + L IK+ G + G+ G A N + GF Sbjct: 1 MKKSLLMFIAATAIGFTSVAHAEHDTLEKIKRTGEITLGVRESS-GLAYALGNNKYVGFH 59 Query: 61 VDFCRALSSAIFDD---PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + + I P KI YLP+ ++ R L++K D +T + R Sbjct: 60 TEMAERIIDDISKKIAKPIKIHYLPITSQNRIPLLKNKTYDFECGSTTNDIARSKEAA-- 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F TY + + K I S+ L+G ++ GTT+ + +A N+++ + + Sbjct: 118 FAYTTYIEEVRIAVKKNSNIKSLDDLNGKTVATTTGTTSVQLIRKNKRAKNIQFKVLKGK 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + + DA+ D S L + PS++VIL ++S P+A + D ++ Sbjct: 178 DHGDSFLLLESGKADAFVMDASILAGHIAKSKNPSDYVILDTVLSVEPIACMLRLNDKKF 237 Query: 238 YNIVSWTHYAMVTAEELG 255 ++ + + E L Sbjct: 238 EQTINDSIVRQIKDESLE 255 >gi|221065073|ref|ZP_03541178.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] gi|264680314|ref|YP_003280224.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni CNB-2] gi|299532720|ref|ZP_07046108.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni S44] gi|220710096|gb|EED65464.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] gi|262210830|gb|ACY34928.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni CNB-2] gi|298719355|gb|EFI60324.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni S44] Length = 299 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 100/249 (40%), Gaps = 8/249 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +I + T F+ L IK G + G+ G NG + GF Sbjct: 1 MKKHLL-AIAVTALATGTVFAQANDTLAKIKSTGSVTLGVRESS-GLGYTLGNGKYVGFH 58 Query: 61 VDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + + + +++Y P+ ++ R +Q+ +DI +T R+ Sbjct: 59 TEMGERILKDIQKQLGLTALEVKYQPVTSQNRIPLVQNGTVDIECGSTTNNTARQKDAAF 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 AF TY + GI+ + L+G +I GTT+ TL +A + + ++ Sbjct: 119 AFT--TYVEEVRIATRANSGITGIKDLNGKTIVTTTGTTSVQTLRKNKRADGLTFKEVMG 176 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R DA+ D S L A + P+++ I+ +++S P+A + + D Sbjct: 177 KDHADSFLMLETGRADAFIMDGSILAANISKSKAPNDYKIVGEVLSVEPIACMMRKDDPA 236 Query: 237 WYNIVSWTH 245 + V + Sbjct: 237 FKKAVDESI 245 >gi|83745670|ref|ZP_00942728.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|83727747|gb|EAP74867.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] Length = 319 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 96/259 (37%), Gaps = 6/259 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L++ + ++S L IK G ++ V F+ + A G G+ Sbjct: 24 MLPRVRKLLPALLVFPLMNAVASSSTLDRIKATGAIRLAHRESSVPFSYLDAGGKPIGYS 83 Query: 61 VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D C L AI ++ K+QY+ + R A+ + + D+ +T RE + Sbjct: 84 MDLCMRLVDAIRENLKRPDLKVQYVQVTPATRMDAIMNGKADLECAST--NNARERREKV 141 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 AF Y ++ GI + L G ++ G+ + +A + + Sbjct: 142 AFTIPHYIANGRMLVKTASGIQKLEDLRGKTVVSTRGSANGDLVRQLSEAGGLGITVVEA 201 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + A + A+ D L +K T P+++ I+ P A + + D E Sbjct: 202 SDHAQSFAMLADGKAQAFAMDDVLLAGMKATAKNPADYAIVGKTQQVVPYAIMLNKNDPE 261 Query: 237 WYNIVSWTHYAMVTAEELG 255 + ++ ++ E Sbjct: 262 FKKLIDAAMSRLMEDGEAE 280 >gi|225163910|ref|ZP_03726202.1| extracellular solute-binding protein family 3 [Opitutaceae bacterium TAV2] gi|224801487|gb|EEG19791.1| extracellular solute-binding protein family 3 [Opitutaceae bacterium TAV2] Length = 269 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 87/258 (33%), Gaps = 15/258 (5%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASIL-----GDIKKRG--FLKCGINTGLVGFAEVKA 52 M K + ++ L L F + S K G + G++ Sbjct: 1 MKKRIALGLMALTASLLFAACGQKESTSPSGADQTAPKPGARKIIVGLDDNFPPMGFRNE 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 GFD+D R + + +++ P++ + L K++D L T R+ Sbjct: 61 QNQIVGFDIDMAREAGKRMGIE---VEFKPIDWSAKEAELSGKRVDALWNGLTITEERKK 117 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 +G F + Q ++ K GI + + L+G ++ VQ G++ + Sbjct: 118 KIG--FTTPYMENHQIIVVTTKSGIKNKAGLAGKTVGVQEGSSAVQAVEKDADVRKTFRD 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 F A R DA D + T +P+E+V+L + + Sbjct: 176 LKAFGDNVTALMDLSAGRLDAVVVDE--VVGRYYTAKKPAEYVVLTEHFGTEDYGVGTRK 233 Query: 233 GDTEWYNIVSWTHYAMVT 250 DTE + AM Sbjct: 234 DDTELLGKLQNALDAMKQ 251 >gi|328462032|gb|EGF34212.1| glutamine ABC transporter [Lactobacillus helveticus MTCC 5463] Length = 272 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 94/251 (37%), Gaps = 14/251 (5%) Query: 1 MYKDFFVSIL----CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M K FF+S L L L S + ++ +K + G+ F + G Sbjct: 1 MKKRFFLSTLLIGIALFTLSACSQNKKQNVYQTVKSTKTINWGVKADTPLFGSMNIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GF++D +AL+ + +K ++ A + L+++ +D + T RE Sbjct: 61 INGFEIDLAKALTKEMLGKNAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPEREK--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + GQ ++ K I +V L+ + V GTT + + + Sbjct: 119 VNFSKPYFPAGQSIMVAKNNKIKNVKDLNNKKVLVVKGTTAADAVKKFAPKA----EILQ 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + A +A + DA+ D L S + ++ + P A+ +G T Sbjct: 175 FDDYGQAFTALKAGQGDAFVTDNGILVG---ILRDSSGYKLVGGNFTNQPYGIAVNKGQT 231 Query: 236 EWYNIVSWTHY 246 E ++ Sbjct: 232 EMDKQINLALT 242 >gi|257062232|ref|YP_003140120.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] gi|256592398|gb|ACV03285.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] Length = 299 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 105/256 (41%), Gaps = 11/256 (4%) Query: 1 MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + IL L++ + S +L IK+ G + G + F + G W G+ Sbjct: 1 MGKKVTLFILTLVLATTGQASSWAGQVLEKIKQTGVINAGTRKDAIPFGYINEQGKWVGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D + + P K+ + + ++RF ++ +DI +T +T R + + Sbjct: 61 SLDVLEIIRKDVEKQLGKPIKLNLVEVTTQDRFNKIKDGSLDIECASTTFTWERNKT--V 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G ++ K +GI SV L+G + V TT E + A ++ Sbjct: 119 DFTVSYFASGTKVLVKKDRGIGSVETLAGLKVGVIPKTTNEQAIKIQQPAA----QLVMV 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235 + +E A DA+ D L LK + P+ ++P+ + A I Q + Sbjct: 175 KDRKEGLQKLEAGTIDAFASDGILLEGLKKESSNPNNLEVVPEFPYAYESYACMIPQDQS 234 Query: 236 EWYNIVSWTHYAMVTA 251 +W N+V+++ + Sbjct: 235 QWRNMVNYSLVKFMEG 250 >gi|325576799|ref|ZP_08147414.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] gi|325161005|gb|EGC73123.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] Length = 285 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 8/227 (3%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + S L I+K G ++ G+ + F V A G +GFDV+ +A+ + D +K++ Sbjct: 33 GAKTVSSLEQIQKDGKVRIGVFSDKPPFGYVDAQGKSQGFDVEIGKAIGKDLLGDENKVE 92 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++ ++A R L SK++DI+ N T R+ + F G + I+ Sbjct: 93 FVLVDAANRAEYLLSKKVDIILANFTVTPARKEV--VDFANPYMKVALGVVSKDGSVITD 150 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + QL G ++ V GTT ++ +F + + FE+ E A R R DA + D + Sbjct: 151 LEQLKGKTLIVDKGTTADI----FFTKNYPDVKLLKFEQNTETFEALRDGRGDALSNDNT 206 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 L+A P V + + + +APA+ + E N ++ Sbjct: 207 FLFAWAKQ--NPGYTVGVKNFGDQDVIAPAVRKDAPELLNWLNNEIQ 251 >gi|186473553|ref|YP_001860895.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184195885|gb|ACC73849.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 302 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 95/265 (35%), Gaps = 12/265 (4%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + +++ T+ A L I+ + G V F+ V +N Sbjct: 1 MNRLTSLALALCVAAPCLTTTTGAAAQETQPTLAKIEAANLIAIGHRETSVPFSYVDSNN 60 Query: 55 DWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 GF D C + A+ +++++P+ ++ R +Q+ +D+ T R Sbjct: 61 QVIGFSQDLCNRIIDAVKVKTHKPNLQVRFIPVTSQNRISLVQNGTVDLECGVTTNLTSR 120 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 +AF + + K GI L+G ++ GTT+E L + M Sbjct: 121 --QNQVAFGDTFFVATTRLLTRKDSGIKDFPDLAGKTVVTNQGTTSERILRKMNEEKKMN 178 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 I + E R AY D L + +P++ VI+ S + Sbjct: 179 MQIISAKDYGEGRMTLETGRAAAYMMDDVLLAGTRTLTAKPADWVIVGTPQSSEAYGFML 238 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELG 255 +GD + IV T ++ + E+ Sbjct: 239 RKGDPAFLKIVDDTLAQVMKSGEID 263 >gi|330432864|gb|AEC17923.1| cystine transporter subunit [Gallibacterium anatis UMN179] Length = 280 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 100/248 (40%), Gaps = 14/248 (5%) Query: 2 YKDFFVSILCLIILFFTSFS------TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 K + L T+ S L I++ G ++ G+ + F V G Sbjct: 5 KKLTAALFATTLALGLTACDDNDKADGAKSQLAQIQEAGKVRIGVFSDKPPFGYVDGQGK 64 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GFDV+ + ++ + D +K +++ + A R L S ++DI+ N T R+ Sbjct: 65 SQGFDVEIGKEIAKDLVGDENKAEFVLVEAANRAEYLLSNKVDIILANFTVTPARKEV-- 122 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + + I+ + QL+ ++ V GTT + +F + + Sbjct: 123 VDFANPYMKVALGVVSKEGSVITDIQQLTDKTLLVNKGTTADA----FFTKNYPNIKLLK 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 FE+ E A + R DA D + L+A + P V + + + +APA+ + Sbjct: 179 FEQNTETFDALKDGRGDALAHDNTLLFAWA--KNNPGYTVGVRSLGEQEFIAPAVQKNQP 236 Query: 236 EWYNIVSW 243 E ++ Sbjct: 237 ELLKWLND 244 >gi|307133280|ref|YP_003885296.1| cystine-binding protein [Dickeya dadantii 3937] gi|306530809|gb|ADN00740.1| Cystine-binding protein [Dickeya dadantii 3937] Length = 278 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 63/328 (19%), Positives = 108/328 (32%), Gaps = 66/328 (20%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K V L ++ + + A L DI+K G +K + F V + G+ Sbjct: 1 MKKSLLVFSLLAGLVSL-AGNAQADKLDDIQKAGVVKVAVFDSNPPFGYVDPQSKKLVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A+ A+ ++ N R L SK++D+++ N T R + F Sbjct: 60 DVDVAEAIGKALGVK---VELRATNPANRIPLLTSKKVDLIAANFTITDERAK--QVNFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI HK + + + I GT E+TL +++ I ++ Sbjct: 115 VPYFATGQKFIAHKG-VLKTPDDIKNLRIGADKGTVQEITLREHYPTAK----VISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237 A R A T D + L L + I P I+K I +G+ Sbjct: 170 PLAFTALRNGNVQAITQDDAKLVGLLGNLPAAQKADFEISPFSITKEYQGIGIPKGEDRL 229 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 V+ L ++K + Sbjct: 230 TQKVNDI-------------------------------LLNLEKQGD------------- 245 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRG 325 +++ ++ R G ++ PRG Sbjct: 246 -VVK-------IYHRWFGPETPSAQPRG 265 >gi|225860607|ref|YP_002742116.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae Taiwan19F-14] gi|225727230|gb|ACO23081.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae Taiwan19F-14] Length = 264 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 104/251 (41%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 116 FTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE+ Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYTSKRT-----ALLDDSFKPSDYGIVTKKSNTEF 230 Query: 238 YNIVSWTHYAM 248 + + Sbjct: 231 NDYLDNLVTKW 241 >gi|24379909|ref|NP_721864.1| putative ABC transporter, glutamine binding protein [Streptococcus mutans UA159] gi|24377888|gb|AAN59170.1|AE014984_5 putative ABC transporter, glutamine binding protein [Streptococcus mutans UA159] Length = 270 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 115/278 (41%), Gaps = 21/278 (7%) Query: 2 YKDFFVSILCLIILFFTSFS--------TNASILGDIKKRGFLKCGINTGLVGFAEVKA- 52 K F +S+ LI++ + + + IK+ G LK G+ + F A Sbjct: 3 IKKFLISLAALIMIATSLSGLSKVNADNVTSPQVKKIKRAGVLKVGVKQDVPNFGYYNAE 62 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G ++G ++D R ++ +I ++ +P+ + R + + Q+D++ T R+ Sbjct: 63 TGKYEGMEIDIARKIAKSIGVK---LELVPVTTQTREPLMDNGQVDLVIATYTITPERQA 119 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 S + Y+D GF++ + IS +S L G +I V G TT++ L Y K H++K++ Sbjct: 120 SYSI--SKPYYYDQIGFLVRQSSKISKISDLDGLTIGVSQGATTKVNLEAYAKKHHLKFN 177 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E+ + + R DA++ D S L + +L + A + Sbjct: 178 YVQLGSFPELAISLYSKRIDAFSVDKSILTGYVSKQSK-----LLKSGFNTQEYGIATKK 232 Query: 233 GDTEWYNIVSWTHYAMVT--AEELGITQKNINQVSKDT 268 +T V++ + E + N+ D Sbjct: 233 SNTGLTKYVNYLLKKWTADKSLESIYNKHNLESAKPDK 270 >gi|46579165|ref|YP_009973.1| amino acid ABC transporter amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120603261|ref|YP_967661.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4] gi|46448578|gb|AAS95232.1| amino acid ABC transporter, amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120563490|gb|ABM29234.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio vulgaris DP4] gi|311233003|gb|ADP85857.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris RCH1] Length = 275 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 101/251 (40%), Gaps = 11/251 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +++ ++F S + ++ K ++ G+ T + G+W GFD Sbjct: 1 MRLGKIIALAAAFLVFTGSAALAGPAYDNVMKDKKIRVGLMTDSIPGGFYNEKGEWGGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D ++ + D ++Q +N K R +Q ++DI N T R+ + F Sbjct: 61 YDIATEIAKRMGVDIERVQ---VNNKTRIAYVQQGRVDISVSNMTHTRERDK--SVDFSI 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN---MKYHPIVFE 177 +FDGQ + K + SV + G I GTT+E+ + K I F+ Sbjct: 116 TYFFDGQKVLAKKGQF-KSVKDMVGKKIATMQGTTSEVNVKRALKEAGDPNPDQSVISFQ 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + E A + R ++ D S L + P + ++ + +++ P A+ Q D+ Sbjct: 175 KESECFQALQMGRVAGWSTDASILVGY--SAKEPGKFELVGNFLAEEPYGIAMPQDDSAL 232 Query: 238 YNIVSWTHYAM 248 + V+ M Sbjct: 233 RDAVNAALQDM 243 >gi|294670245|ref|ZP_06735138.1| CjaA protein [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307982|gb|EFE49225.1| CjaA protein [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 288 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 108/262 (41%), Gaps = 23/262 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGD---------------IKKRGFLKCGINTGLVG 46 K + +I L + + A IK++G ++ G+ Sbjct: 5 KKFSTLLAGAVIALGLAACNGGADNQAASGGQPAAAGADTVAAIKEKGVIRIGVFGDKPP 64 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V ANG +GFDV+ + ++ + P KI+++ A R ++S ++D+L N Sbjct: 65 FGYVDANGKNQGFDVEIAKEMAKDLLGSPDKIEFVLTEAANRVEYVRSGKVDVLLANFTQ 124 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R + F G + K K I+ V+QL ++ V GTT + +F Sbjct: 125 TPERAE--AVDFASPYMKVALGVVSPKGKPITDVAQLKDQTLLVNKGTTADA----FFTK 178 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 ++ + + F++ E A + R A D + L+A + P V + +I + Sbjct: 179 NHPEVKLLKFDQNTETFDALKDGRGVALAHDNALLWAWA--KENPDYEVAIGNIGPAESI 236 Query: 227 APAIIQGDTEWYNIVSWTHYAM 248 APA+ +GD + V+ AM Sbjct: 237 APAVKKGDKALLDWVNGEIAAM 258 >gi|289676732|ref|ZP_06497622.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. syringae FF5] Length = 341 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 84/241 (34%), Gaps = 7/241 (2%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDD---- 74 + L IK+ G + G + F+ + A+G G+ D + AI D Sbjct: 51 AAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHDIQLKIVEAIKKDLDMP 110 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K++Y + ++ R +Q+ +D+ +T + R + F + G + K Sbjct: 111 DLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNIER--QQQVDFSIGIFEVGTRLLSKKD 168 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 L G ++ AGTT+E L M + I + E + R A+ Sbjct: 169 SSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAF 228 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L +P + + S + +GD + V A + E+ Sbjct: 229 MMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATFKSGEI 288 Query: 255 G 255 Sbjct: 289 N 289 >gi|226198726|ref|ZP_03794290.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei Pakistan 9] gi|225929166|gb|EEH25189.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei Pakistan 9] Length = 359 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 87/261 (33%), Gaps = 8/261 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + L I+ G + G+ V F+ G Sbjct: 62 MKPLRPLLSIAVGCALAAAAHADDAGPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIG 121 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + + + I ++ +P+ ++ R +Q+ +D+ +T T R + Sbjct: 122 YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 179 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 ++F + G I+ K G+ L+G ++ AGTT E L + M I Sbjct: 180 QVSFSNSIFQYGMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 239 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ R A+ D LY K P ++VI + + + D Sbjct: 240 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 299 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + + M + E Sbjct: 300 PGFKQLADRVIARMQRSGEAE 320 >gi|126446655|ref|YP_001079383.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei NCTC 10247] gi|238561893|ref|ZP_04609795.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia mallei GB8 horse 4] gi|251766795|ref|ZP_02264976.2| bacterial extracellular solute-binding protein, family 3 [Burkholderia mallei PRL-20] gi|254175972|ref|ZP_04882630.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei ATCC 10399] gi|254189571|ref|ZP_04896081.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei Pasteur 52237] gi|254203467|ref|ZP_04909828.1| bacterial extracellular solute-binding protein family 3 [Burkholderia mallei FMH] gi|254205346|ref|ZP_04911699.1| bacterial extracellular solute-binding protein family 3 [Burkholderia mallei JHU] gi|254265422|ref|ZP_04956287.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1710a] gi|254356151|ref|ZP_04972428.1| bacterial extracellular solute-binding protein family 3 [Burkholderia mallei 2002721280] gi|126239509|gb|ABO02621.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia mallei NCTC 10247] gi|147745706|gb|EDK52785.1| bacterial extracellular solute-binding protein family 3 [Burkholderia mallei FMH] gi|147754932|gb|EDK61996.1| bacterial extracellular solute-binding protein family 3 [Burkholderia mallei JHU] gi|148025134|gb|EDK83303.1| bacterial extracellular solute-binding protein family 3 [Burkholderia mallei 2002721280] gi|157937249|gb|EDO92919.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei Pasteur 52237] gi|160697014|gb|EDP86984.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei ATCC 10399] gi|238523731|gb|EEP87168.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia mallei GB8 horse 4] gi|243064693|gb|EES46879.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia mallei PRL-20] gi|254216424|gb|EET05809.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1710a] gi|261826291|gb|ABM99036.2| bacterial extracellular solute-binding protein, family 3 [Burkholderia mallei NCTC 10229] Length = 359 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 88/261 (33%), Gaps = 8/261 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + + L I+ G + G+ V F+ G Sbjct: 62 MKPLRPLLSIAVGCALAAAAHANDAGPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIG 121 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + + + I ++ +P+ ++ R +Q+ +D+ +T T R + Sbjct: 122 YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 179 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 ++F + G I+ K G+ L+G ++ AGTT E L + M I Sbjct: 180 QVSFSNSIFQYGMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 239 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ R A+ D LY K P ++VI + + + D Sbjct: 240 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 299 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + + M + E Sbjct: 300 PGFKQLADRVIARMQRSGEAE 320 >gi|330830266|ref|YP_004393218.1| amino acid ABC transporter periplasmic amino acid-binding protein [Aeromonas veronii B565] gi|328805402|gb|AEB50601.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Aeromonas veronii B565] Length = 266 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 52/250 (20%), Positives = 92/250 (36%), Gaps = 16/250 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +S L + + + S L + +RG L+ G + G F G + GF Sbjct: 1 MIKKLILSTLLFCGIATAAPTPAPTSTLDAVLERGVLRVGFDAGYQPFEMTNKQGQYIGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD + ++ + ++++ AL + + D++ T R +L + F Sbjct: 61 DVDLAKMVAKEMGVK---VEFVNTAWDGIIPALLTNKFDVIMGGMTVTPQR--NLRVNFA 115 Query: 120 PITYFDGQGFIMHKK--KGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIV 175 GQ ++ K+ I S + L+ V+ GTT E + + Sbjct: 116 DPYIVVGQTIVLRKEKAGEIKSFTDLNDPKYKIAVKLGTTGEQAVKRLIPKA----TLLQ 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 FE ++ + DA+ D+ N H L + PLA AI +GD Sbjct: 172 FETQDDAKLEVINGKVDAFVYDLPYNAIFASQNQGAVVH--LDKPFTFEPLAWAIRKGDQ 229 Query: 236 EWYNIVSWTH 245 + N + Sbjct: 230 DTLNWFNNYL 239 >gi|150020368|ref|YP_001305722.1| extracellular solute-binding protein [Thermosipho melanesiensis BI429] gi|149792889|gb|ABR30337.1| extracellular solute-binding protein, family 3 [Thermosipho melanesiensis BI429] Length = 247 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 92/247 (37%), Gaps = 20/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + V + +I+ L +IK+RG L G F V + + GFD Sbjct: 3 MRRWVAVFVFLIIVGVIF-----GGTLSEIKERGKLIIGTEPTFPPFEYVDKDNNIVGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + + ++ + L A+ S +ID++ T R + F Sbjct: 58 IDIAKKIAEELGVE---LEIVNLPFDSLIPAIMSDKIDLIIAGMTITKERAKV--IDFSI 112 Query: 121 ITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q ++ K + S+++L G + VQ GTT +L ++D + F++ Sbjct: 113 PYFNANQSIVVRKGESFSPKSLNELVGKRVAVQLGTTGDLVVSDIKR-----IKITRFQK 167 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R DA D + A + + I + + + +TE Sbjct: 168 FTDAFLELQNKRVDAVVLDEAVARAYVKKFPK---FEVSTVIDTGEKYGIGVKKENTELL 224 Query: 239 NIVSWTH 245 V+ Sbjct: 225 EFVNKVI 231 >gi|256377588|ref|YP_003101248.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] gi|255921891|gb|ACU37402.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] Length = 319 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 97/232 (41%), Gaps = 10/232 (4%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73 L + S + I +RG L G++ G+ +GFDVD R ++ ++ Sbjct: 67 LPAPGAMPSGSTMRRIAERGQLVVGVDQNTYLMGFRDPFTGELQGFDVDLAREVARSLLG 126 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DP+K+++ LN+ +R AL++ ++D++ R T R + F Y GQ ++ K Sbjct: 127 DPTKVRFRVLNSDQRLPALETGEVDVVVRTMTITCER--WRRVNFSTSYYEAGQRVLVPK 184 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 G++ ++ LSG +C G+++ + +AH P+ + + + DA Sbjct: 185 DSGVTGLTALSGRKVCATTGSSSLAHV----RAHPSGPVPVAVPNWTDCLVMLQQGQVDA 240 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + D + L + ++ ++ + +G + V+ Sbjct: 241 ISTDDTILAGFAAQDP---YTEVVGPRLTTESYGIGVAKGADDLTRFVNGVL 289 >gi|300313151|ref|YP_003777243.1| glutamate/aspartate ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gi|300075936|gb|ADJ65335.1| ABC-type glutamate/aspartate transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 315 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 93/261 (35%), Gaps = 8/261 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M +L + +S L IK G L G+ + F+ + ++G Sbjct: 1 MKLLKLAGVLVGASVLMSSVHAEEFTGRLKKIKDSGTLTLGVRDSSIPFSYLDDKQSYQG 60 Query: 59 FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + +D C A+ + I+ +P+ + R + + DI + R Sbjct: 61 YSIDLCLKAATAIQKKLGLTSLNIKMVPVTSATRIPLIANGTTDISCDSATNNQER--WN 118 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 +AF + F+ K + ++ L G ++ +GT+ + N+ + + Sbjct: 119 QVAFSVTEFVTANKFLSKKAANLKTLEDLKGKTVVSTSGTSNLKQITALNAERNLGMNIL 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D L +L + P ++ + + +S P + +GD Sbjct: 179 AAKDHAEAFLMVETGRAAAFVMDDILLSSLAANSKAPGDYQVSSEALSVEPYGLILPKGD 238 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 E+ +V + +++ Sbjct: 239 KEFKTVVDDALTVVYKGDDIK 259 >gi|170288143|ref|YP_001738381.1| extracellular solute-binding protein [Thermotoga sp. RQ2] gi|170175646|gb|ACB08698.1| extracellular solute-binding protein family 3 [Thermotoga sp. RQ2] Length = 246 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 102/247 (41%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + I+ F+ ++ +IK RG+L G++ F V +G+ GFD Sbjct: 1 MKKLLVVLVLLVSIVIFS------GVINEIKSRGYLLVGLSADFPPFEFVDESGNIVGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + + ++ + + +L +K+ID++ T R+ + F Sbjct: 55 VDLAKEIARRLGVE---LKIVDMTFDGLIPSLLTKKIDVIISGMTITEERKKVVA--FSD 109 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + GQ ++ K + L G ++ VQ GTT ++ ++ Y + F++ Sbjct: 110 PYFDAGQVIVVRKDSDFRPKTYEDLVGKTVAVQIGTTGDIEVSKY-----EGIKVVRFDK 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R DA D + + + VI ++S A+ + DT+ Sbjct: 165 FTDAFLELKRGRADAVVLD---SATARAFVAKNPDLVISSGVLSSEQYGIAVRKEDTDLL 221 Query: 239 NIVSWTH 245 ++ Sbjct: 222 EFINSVL 228 >gi|253687586|ref|YP_003016776.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754164|gb|ACT12240.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 298 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 90/259 (34%), Gaps = 6/259 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L A L +K G + G V F+ G+ Sbjct: 3 MRKLALSLLLLGTAASVAQAEDLAGTLKKVKDNGVIVIGHRESSVPFSYYDNTQKVVGYS 62 Query: 61 VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + A+ +++ LP+ ++ R LQ+ D +T L R+ Sbjct: 63 QAYSDKIVEAVKKKLDAPNLQVKLLPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAA- 121 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G + K G+ L+G ++ V +GTT+E+ L + MK I Sbjct: 122 -FSNTIFVVGTRLLTKKDSGVKDFPDLAGKTVVVTSGTTSEVLLNKLNEEKQMKMRIISA 180 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + R A+ D + L + + I+ S+ + + D + Sbjct: 181 KDHGDSFRTLESGRAVAFMMDDALLAGERAKAKSADQWDIVGKAQSEEAYGCMLRKDDPQ 240 Query: 237 WYNIVSWTHYAMVTAEELG 255 + +V T + T+ E Sbjct: 241 FKKLVDDTIAEVQTSGEAE 259 >gi|224371421|ref|YP_002605585.1| GltI [Desulfobacterium autotrophicum HRM2] gi|223694138|gb|ACN17421.1| GltI [Desulfobacterium autotrophicum HRM2] Length = 300 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 106/264 (40%), Gaps = 17/264 (6%) Query: 1 MYKDFFVSILCLIILFFT---------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M K V++ L + + + ++L I+K G + G G V F + Sbjct: 1 MEKMMGVAVAAFYSLAILLGITGNMDHAVAGDENLLEKIEKSGEVHMGFREGSVPFGFID 60 Query: 52 ANGDWKGFDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 NG W GF +D + + F+ P K+ P+N K R + + + + +T TL Sbjct: 61 KNGSWDGFGIDLGTEVVKDLEKKFNKPIKLVKHPMNPKTRITMVTNGMVAMGIGSTTITL 120 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 RE + F + G ++ K ISS + + G + + +G+T + D Sbjct: 121 AREEV--VDFSLPYFLTGTRLLVPKDSPISSFADIGGKRVGMGSGSTANIKGMDRAIEQG 178 Query: 169 ---MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 ++FE + A + + DAY D S L ++ P + I+ ++ P Sbjct: 179 LVKPACKKVLFEEHNKGFLALQQGKIDAYFTDASQLAGMRAKARNPQDWKIVGKYLTYEP 238 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMV 249 + +G EW + V+ + M+ Sbjct: 239 YGFILPEGQGEWRDFVNASLIHMI 262 >gi|291280399|ref|YP_003497234.1| amino acid ABC transporter substrate-binding protein [Deferribacter desulfuricans SSM1] gi|290755101|dbj|BAI81478.1| amino acid ABC transporter, substrate-binding protein [Deferribacter desulfuricans SSM1] Length = 269 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 94/251 (37%), Gaps = 15/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K F ++ L F + N+ S L I KRG L+ G+ +G F NG+ Sbjct: 1 MRKFFVSLLVFLFAATFLYAADNSLWEKSTLNQILKRGELRVGLESGYKPFEMTAKNGEI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD + ++ A+ ++ + AL + + DI+ T R +L + Sbjct: 61 IGFDVDLAKVMAKAMGVK---LKIVNTAWDGIIPALITDKFDIIMSGMTITQKR--NLQV 115 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F GQ ++HKK I S L+ + + T A K + K Sbjct: 116 NFADPYIIVGQTLLIHKKDAGKIKSYKDLNNPKYVIASKLGTTGYFA--AKKYIPKAKVN 173 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 FE + + + DA+ D+ L + PL AI +GD Sbjct: 174 AFETEADAFQDFINGKADAFVYDLPLCAYYYSLYKDRVVF--LDKPFTFEPLGWAIKKGD 231 Query: 235 TEWYNIVSWTH 245 ++ N ++ Sbjct: 232 PDFLNWLNNFL 242 >gi|15891687|ref|NP_357359.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15160141|gb|AAK90144.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 297 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 100/257 (38%), Gaps = 8/257 (3%) Query: 1 MYKDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M F + + C + + L I K ++ G F+ NG+ GF Sbjct: 1 MRLSVFCLFLTCFAPVTPLQAADEGDTLQQIAKTAKIRIGYREAEPPFSYQLPNGEITGF 60 Query: 60 DVDFCRALSS----AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 D CRA+S + D +++Y+ RF+ ++S QIDI T R Sbjct: 61 STDLCRAISEDIRSKLKLDKIELEYVKATPATRFILVRSGQIDIECAATTNNSERRKI-- 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + F+ K+ + S++ L+G S+ +GT L +A N+ + Sbjct: 119 VDFSYPNFMTATQFLSRKQDNLKSLADLAGRSVTSASGTVNIEQLNAVNRAKNLNISVMP 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGD 234 + EE A + A+ D L AL T++ P + + + +S P + D Sbjct: 179 TKTNEEAFDLVVAGKASAFVMDGILLAALAATSENPDLYALSEETLSAPEPYGLVFRRND 238 Query: 235 TEWYNIVSWTHYAMVTA 251 + V+ + M T+ Sbjct: 239 PAFKAAVNDSLRHMYTS 255 >gi|167748158|ref|ZP_02420285.1| hypothetical protein ANACAC_02902 [Anaerostipes caccae DSM 14662] gi|167652150|gb|EDR96279.1| hypothetical protein ANACAC_02902 [Anaerostipes caccae DSM 14662] Length = 289 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 101/257 (39%), Gaps = 19/257 (7%) Query: 1 MYK----DFFVSILCLIILFFTSF-------STNASILGDIKKRGFLKCGINTGLVGFAE 49 M K +++L + I T S N S + IKK G +K G+ + F Sbjct: 1 MKKFSRILVVLAVLSMAIGLMTGCGNKKSEKSDNQSSVEQIKKNGKIKVGVFSDKPPFGY 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V NG +G+DV L+ + D +K++++ + A R LQS ++D++ N T Sbjct: 61 VDKNGKNQGYDVVLAHRLAKDLLGDENKVEFVLVEAASRVEFLQSNKVDVILANFTVTDE 120 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ + + G + K I+ V QL G + V GTT E F Sbjct: 121 RKEV--VDYALPYMKVSLGVVSPNGKVITDVKQLKGKKLIVNKGTTAETY----FTQKYP 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + +++ E A + R A D + +YA + + + +APA Sbjct: 175 DIELLKYDQNTEAFNALKDGRGAALAHDNTLVYAWA--RENKGFTTGIKSLGEHDFIAPA 232 Query: 230 IIQGDTEWYNIVSWTHY 246 + +G+ + + Sbjct: 233 VKKGNDDLKGWIDDEIT 249 >gi|42518509|ref|NP_964439.1| ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] gi|41582794|gb|AAS08405.1| ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] Length = 262 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 90/259 (34%), Gaps = 9/259 (3%) Query: 1 MYKDFF---VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + I+ L + + IK RG L G++ V + NG Sbjct: 1 MKKIIRFLGLLIIVLASVGVVGCQRQENSWQAIKSRGTLVIGVDDSFVPMDFRQKNGKLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+ I P + ++ + L++ ID++ T R +A Sbjct: 61 GFDVDLAKAVCKEIGLKPD---FQTIDWSMKETELRNGTIDVIWNGYTKTKARAK--KVA 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-PIVF 176 F + Q + K +GI++ Q+ G + VQ G++ L +Y K + +++ Sbjct: 116 FSKPYLENDQILVTRKNEGINNYRQMKGKILGVQTGSSGADDLDNYPKVLKKRVKSTVLY 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +A R D D + E + I + D Sbjct: 176 DTYNNAFIDLKAGRIDGLLIDGVYANYYLAHSKYQKEFKKEKLPYPSEKFSVGINKKDKT 235 Query: 237 WYNIVSWTHYAMVTAEELG 255 N ++ + EL Sbjct: 236 LKNKINQALDHLEKTGELK 254 >gi|264676197|ref|YP_003276103.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni CNB-2] gi|262206709|gb|ACY30807.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni CNB-2] Length = 238 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 88/239 (36%), Gaps = 7/239 (2%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++LC + + +A L ++ G + V F+ + NG G V+ Sbjct: 2 QLHSTVLCAALGLGFLGAAHADTLAKVRDSGRITLAYRESSVPFSYLD-NGKPIGMTVEL 60 Query: 64 CRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + ++ A+ ++++ + ++ R L + ID+ +T +R +G F Sbjct: 61 SQTVAEAVKKQLNLPALEVRWQAVTSQNRMPLLANGTIDLECGSTTNNTVRAKEVG--FA 118 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ G ++ K GI S + L G + + GTT L + ++ + Sbjct: 119 INHFYTGTRLLVKKSSGIQSYADLKGKTAAITTGTTNLQVLRKANAEQGWGMNIVMAKDH 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R A+ D LY L P + ++ D + P A + + W Sbjct: 179 ADGFLLVENDRAAAFGMDDILLYGLIANAKNPRDFHVVADALQVEPYACMLRSSSSWWM 237 >gi|49475801|ref|YP_033842.1| amino-acid ABC transporter binding protein [Bartonella henselae str. Houston-1] gi|49238608|emb|CAF27849.1| Amino-acid ABC transporter binding protein [Bartonella henselae str. Houston-1] Length = 303 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 95/254 (37%), Gaps = 8/254 (3%) Query: 1 MYKDFFVSILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + I + L IKK G + G+ G NG + G Sbjct: 1 MRKSLLIFIAATTTIIGLIGIAKAENDTLEKIKKTGEVTLGVRESS-GLGYALGNGKYVG 59 Query: 59 FDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 F + + I P KI YLP+ ++ R LQ+ D +T + R Sbjct: 60 FHTEMAEHIIDDISKKIGKPIKIHYLPITSQNRIPLLQNNTYDFECGSTTNDIFRSKEAA 119 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F TY + + K I S+ L+G +I GTT + +A N+ + + Sbjct: 120 --FAYTTYVEEVRIAVKKNSNIKSLEDLNGKTIATTTGTTAVQLIRKNKRAKNINFKVVK 177 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R DA+ D S L + PS++VIL ++S P+A + D Sbjct: 178 GKDHGDSFLLLESGRADAFIMDASILAGHIAKSKNPSDYVILDTVLSVEPIACMLRLNDQ 237 Query: 236 EWYNIVSWTHYAMV 249 + ++ + + Sbjct: 238 NLEHAINESIVHQI 251 >gi|308186031|ref|YP_003930162.1| glutamate/aspartate transport system, periplasmic-binding protein precursor [Pantoea vagans C9-1] gi|308056541|gb|ADO08713.1| Glutamate/aspartate transport system, periplasmic-binding protein precursor [Pantoea vagans C9-1] Length = 298 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 83/248 (33%), Gaps = 6/248 (2%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K +L + L I G + G V F+ G+ Sbjct: 4 RKVALSLLLISAAAGAAQAEDLSGTLKKINDNGVIVVGHRESSVPFSYYDNQQKVVGYSQ 63 Query: 62 DFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + A+ AI +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 64 AYSNAIVEAIKAKLNKPDLQVKMIPITSQNRIPLLQNGTYDYECGSTTNNLERQKQAA-- 121 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + G ++ K I + L G ++ V +GTT+E+ L + I + Sbjct: 122 FSDTIFVIGTRLLVKKDGPIKDFADLKGKTVVVTSGTTSEVLLHKLNDEQKLDMRIISAK 181 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + R A+ D + L + +P IL SK + + D ++ Sbjct: 182 DHGDSFRTLETGRAVAFMMDDALLAGERAKAKKPDNWEILGTPQSKEAYGCMLRKDDPQF 241 Query: 238 YNIVSWTH 245 +V T Sbjct: 242 KALVDETI 249 >gi|51245088|ref|YP_064972.1| glutamine ABC transporter, periplasmic substrate binding protein [Desulfotalea psychrophila LSv54] gi|50876125|emb|CAG35965.1| probable glutamine ABC transporter, periplasmic substrate binding protein [Desulfotalea psychrophila LSv54] Length = 271 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 97/248 (39%), Gaps = 9/248 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ + ++ + + I+K L+ GI + A +W GFD Sbjct: 1 MRLKSIIAGAVISVMVSGVVAFAGPVWDKIQKSKTLRAGIMNNSIPGAYYNDKKEWVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + ++ + K R LQ +ID+ N T RE + F Sbjct: 61 VDMAKEIAKRLGLKLEQVL---VTDKTRIGFLQQGRIDMSIANM--THKRERDKSIDFSI 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +FDGQ + K + + L G +I GTT+E+ + K + ++ Sbjct: 116 TYFFDGQKMLTRKG-KYADWNALVGKTIATVQGTTSEINVKTLMKKMG-GAEIVSYQDYP 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + R A++ D + L P ++ ++ D S+ P + Q +++ + Sbjct: 174 SAFNALQMGRVQAFSTDSTILLGYAAQ--EPGKYELVGDFFSREPYGIGLPQDESQLRDA 231 Query: 241 VSWTHYAM 248 V++ M Sbjct: 232 VNFALQDM 239 >gi|27375213|ref|NP_766742.1| glutamate/aspartate periplasmic binding protein [Bradyrhizobium japonicum USDA 110] gi|27348349|dbj|BAC45367.1| glutamate/aspartate periplasmic binding protein precursor [Bradyrhizobium japonicum USDA 110] Length = 308 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 94/245 (38%), Gaps = 6/245 (2%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 S+L L T + L IKK ++ G F+ + +G G+ ++ Sbjct: 15 WLAASLLATTALAQTGSEGLSPTLSAIKKAHVVRLGYRESSPPFSFLDQSGRPIGYSLEL 74 Query: 64 CRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 C A+ I + I Y+ + + +R A+ +ID+ +T R + F Sbjct: 75 CEAIVEEIGVEVDDPNLKIDYVKVTSDDRIDAVLQNKIDLECGSTTANAERAKRVA--FS 132 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 P+ + G ++ K + S++ L G +I V GTT E + K ++ V Sbjct: 133 PLMFVAGTKLMVPKASSVQSLTDLKGKTIVVTKGTTNEQAIQAADKKSSLGLTIAVGADH 192 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ + DA+ D L L + ++ + D +S P +G+ + Sbjct: 193 EQSFQMLADGKADAFATDDILLSGLIARHKAQDKYRVTGDYLSYDPYGIMFRKGEPQLSA 252 Query: 240 IVSWT 244 +V T Sbjct: 253 VVERT 257 >gi|49474411|ref|YP_032453.1| amino-acid ABC transporter binding protein [Bartonella quintana str. Toulouse] gi|49239915|emb|CAF26313.1| Amino-acid ABC transporter binding protein [Bartonella quintana str. Toulouse] Length = 303 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 101/260 (38%), Gaps = 8/260 (3%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K F ++ ++ L IKK G + G+ G A NG + G Sbjct: 1 MKKSLSIFTAVTVTVMGLIGIAKAENDTLEKIKKTGEITLGVRESS-GLAYALGNGKYVG 59 Query: 59 FDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 F + + I P KI YLP+ ++ R L++ D +T + S Sbjct: 60 FHTEMAERIIDDISKKIGKPVKIHYLPITSQNRIPLLKNSTYDFECGSTTNDVS--SSKE 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 AF TY + + K I S L+G ++ GTT+ + ++ N+ ++ + Sbjct: 118 AAFAYTTYVEDVRIAVKKNSNIKSFDDLNGKTVATTTGTTSVQIIRKNQRSKNINFNVVK 177 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + R DA+ D S L + PS+++IL ++S P+A + D Sbjct: 178 GKDHGDSFLLLESGRADAFIMDASILAGHIAKSKNPSDYIILDTVLSVEPIACMLRLNDK 237 Query: 236 EWYNIVSWTHYAMVTAEELG 255 ++ + + E L Sbjct: 238 NLKQAINDSIVRQIKDESLK 257 >gi|194397781|ref|YP_002037268.1| ABC transporter substrate-binding protein [Streptococcus pneumoniae G54] gi|194357448|gb|ACF55896.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae G54] Length = 264 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 103/251 (41%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 116 FTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYTSKRT-----ELLDDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAM 248 + + Sbjct: 231 NDYLDNLVTKW 241 >gi|157145937|ref|YP_001453256.1| hypothetical protein CKO_01690 [Citrobacter koseri ATCC BAA-895] gi|157083142|gb|ABV12820.1| hypothetical protein CKO_01690 [Citrobacter koseri ATCC BAA-895] Length = 277 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 91/244 (37%), Gaps = 11/244 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDV 61 K +++ L + A L DIK G +K F V G+DV Sbjct: 10 KKTLLALSALFASGIAALPAQADQLADIKAAGVVKVATFDANPPFGSVDPQTHKIVGYDV 69 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 DF AL+ ++ ++ + N R LQS + D++ + T R + + F Sbjct: 70 DFAEALAKSLGVK---LELVATNPANRIPLLQSGKADLIVADITITPER--AQVIDFSVP 124 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + GQ F++ + + S A I GTT E L F + + ++ + Sbjct: 125 YFITGQQFLVPATSP-DKLDEYSRARIGAVKGTTGEQALHQRFP----QSRVLAYDDIPL 179 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A R A T D + L L + ILPD++SK + + +G+ V Sbjct: 180 ALTALRNGNVQAITQDSTILAGLLSGAPDKANFKILPDLLSKEEIGVGVKKGEPALLKAV 239 Query: 242 SWTH 245 + Sbjct: 240 NDEL 243 >gi|319793095|ref|YP_004154735.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315595558|gb|ADU36624.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 299 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 105/259 (40%), Gaps = 12/259 (4%) Query: 1 MYKDFFV--SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + ++ +++F S + A L +K G + G+ G + G + G Sbjct: 1 MKTQSLLNAAVASALVVFCASAAAEADTLKKLKDTGVITMGVRDGSGAISFTTGPGKYTG 60 Query: 59 FDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 F V+ C + + I D +++Y + + R +Q+ +DI T R+ + Sbjct: 61 FHVEICERVIADIKKSAQLDKLEVRYQLVTPQNRIPLVQNGTVDIECGTTTNNAARQKEV 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F P Y +G + I S +QL+G + +G+T+ L + + Sbjct: 121 A--FAPTLYVEGVRIAVKANSPIKSTTQLAGKTAAATSGSTSVQLL----RKLKSDATEL 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + E R DA+ D L L + P+++ +L I+S P+A + +GD Sbjct: 175 MAKDNSEGFLLLETGRADAFVADGQILATLISKSKEPAQYRLLDQILSTEPIAIMLPKGD 234 Query: 235 TEWYNIVSWTHYAMVTAEE 253 + + V + AM + E Sbjct: 235 SAFKKAVDQSIEAMARSGE 253 >gi|221214829|ref|ZP_03587798.1| glutamate/aspartate periplasmic-binding protein [Burkholderia multivorans CGD1] gi|221165368|gb|EED97845.1| glutamate/aspartate periplasmic-binding protein [Burkholderia multivorans CGD1] Length = 301 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 89/236 (37%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI----FDDPSKIQ 79 + L I++ + G V F+ V A+G GF D C + +A+ +++ Sbjct: 29 SGTLEKIRQTNLISIGHRETSVPFSYVDASGKVIGFSQDLCDRVIAAVKARTGKPDLQVR 88 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++P+ ++ R +Q+ +D+ T R + F + + + GI Sbjct: 89 FIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--FSTTFFVATTRLLTRTQSGIRD 146 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G ++ GTT+E L + M I + E + R AY D Sbjct: 147 FPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRLTLESGRAAAYMMDDV 206 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L ++ +P++ I+ S + + D ++ +V ++ E+ Sbjct: 207 LLAGVRQLAAKPADWRIVGTPQSSEAYGFMLRKDDPQFKALVDSVLVQLMKRGEID 262 >gi|254195402|ref|ZP_04901830.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei S13] gi|254299631|ref|ZP_04967080.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 406e] gi|157809634|gb|EDO86804.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 406e] gi|169652149|gb|EDS84842.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei S13] Length = 298 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 87/261 (33%), Gaps = 8/261 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + L I+ G + G+ V F+ G Sbjct: 1 MKPLRPLLSIAVGCALAAAAHADDAGPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIG 60 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + + + I ++ +P+ ++ R +Q+ +D+ +T T R + Sbjct: 61 YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 118 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 ++F + G I+ K G+ L+G ++ AGTT E L + M I Sbjct: 119 QVSFSNSIFQYGMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ R A+ D LY K P ++VI + + + D Sbjct: 179 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 238 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + + M + E Sbjct: 239 PGFKQLADRVIARMQRSGEAE 259 >gi|53715943|ref|YP_106460.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei ATCC 23344] gi|121597649|ref|YP_990548.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei SAVP1] gi|52421913|gb|AAU45483.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei ATCC 23344] gi|121225447|gb|ABM48978.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei SAVP1] Length = 298 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 88/261 (33%), Gaps = 8/261 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + + L I+ G + G+ V F+ G Sbjct: 1 MKPLRPLLSIAVGCALAAAAHANDAGPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIG 60 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + + + I ++ +P+ ++ R +Q+ +D+ +T T R + Sbjct: 61 YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 118 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 ++F + G I+ K G+ L+G ++ AGTT E L + M I Sbjct: 119 QVSFSNSIFQYGMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ R A+ D LY K P ++VI + + + D Sbjct: 179 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 238 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + + M + E Sbjct: 239 PGFKQLADRVIARMQRSGEAE 259 >gi|222109804|ref|YP_002552068.1| family 3 extracellular solute-binding protein [Acidovorax ebreus TPSY] gi|221729248|gb|ACM32068.1| extracellular solute-binding protein family 3 [Acidovorax ebreus TPSY] Length = 299 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 104/254 (40%), Gaps = 8/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + ++ ++F+ L IK G + G+ G NG + GF Sbjct: 1 MKKHLLAAAITVLA-AGSAFAQANDTLAKIKSTGAVTLGVRESS-GLGYTLGNGKYVGFH 58 Query: 61 VDFCRALSS----AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + + + +I+Y P+ ++ R + + +DI +T R+ + Sbjct: 59 TEMGERILADIQKQLGLANMEIKYQPVTSQNRIPLVTNGTVDIECGSTTNNTARQKDVA- 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F TY + ++ K GI+ + L+G +I GTT+ TL +A + + ++ Sbjct: 118 -FAVTTYVEEVRIAVNAKSGITGIKDLNGKTIVTTTGTTSVQTLRKNKRADGLTFKEVMG 176 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R DA+ D S L A + P++ I+ +++S P+A + + D Sbjct: 177 KDHADSFLMLETGRADAFIMDGSILAANISKSKNPADFKIVGEVLSVEPIACMLRKDDPA 236 Query: 237 WYNIVSWTHYAMVT 250 + V + + Sbjct: 237 FKKAVDDSIKRQIA 250 >gi|299067960|emb|CBJ39174.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum CMR15] Length = 298 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 108/309 (34%), Gaps = 25/309 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M ++L I + ++ L IK G + G+ + F+ G Sbjct: 1 MNLAKLATVLAAIGVLSSAAHAQELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIG 60 Query: 59 FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D A+ + +++ +P+ ++ R LQ+ IDI +T L R+ Sbjct: 61 YSYDVATKVVEAVKEQLKLKDLQVKEIPVTSQNRITLLQNGTIDIECGSTTNNLERQK-- 118 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 +F + G ++ K GI + L G ++ AGTT+E L + + I Sbjct: 119 QASFTNTIFIIGTRMMVKKDAGIKDWTDLKGKNVVTTAGTTSERLLRKMNDEKQLGMNII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D + LY + P++ +++ S+ + + D Sbjct: 179 STKDHGQSFLTLESGRAVAFMMDDALLYGERAKARTPADWIVVGKPQSREAYGCMVRKDD 238 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL-GIDKSSNIGEALGLTK 293 + + T + + + N + +++ + L+ Sbjct: 239 APFKTLADKTI---------------VGMMKDGSINAEYKKWFEQPVPPKGLNLEFPLSD 283 Query: 294 DWTYRIIRH 302 D +I+ Sbjct: 284 D-MKALIKS 291 >gi|226362770|ref|YP_002780548.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4] gi|226241255|dbj|BAH51603.1| putative ABC transporter substrate-binding protein [Rhodococcus opacus B4] Length = 325 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 52/226 (23%), Positives = 90/226 (39%), Gaps = 10/226 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQ 79 + S L I+ RG L G + F+ G GFD+D R ++ +F DPSK++ Sbjct: 76 APPGSALAAIRARGRLIVGTDQNTNLFSFRDPKTGTLSGFDIDLAREIARDLFGDPSKVE 135 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + L + RF AL+ +D++ T T R +G F + + Q ++ + GISS Sbjct: 136 FRLLTSAGRFDALERNDVDLVVHATSITCERAARVG--FSSVYFEAFQRLLVPEGSGISS 193 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L+G +C TT+ T+ + ++ + + DA T D S Sbjct: 194 PTDLAGKRVCTFIDTTSLATIQRVSPEA----TIVAVPDWDDCLTTLQLGQADAATTDNS 249 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L L + I+ + P + + V+ T Sbjct: 250 ILAGLAAQDPN---LEIVGPNLELEPYGVVANKNNDALVRFVNGTL 292 >gi|107022690|ref|YP_621017.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116689639|ref|YP_835262.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|170732941|ref|YP_001764888.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|254245482|ref|ZP_04938803.1| Extracellular solute-binding protein, family 13 [Burkholderia cenocepacia PC184] gi|105892879|gb|ABF76044.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116647728|gb|ABK08369.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] gi|124870258|gb|EAY61974.1| Extracellular solute-binding protein, family 13 [Burkholderia cenocepacia PC184] gi|169816183|gb|ACA90766.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 271 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 62/249 (24%), Positives = 94/249 (37%), Gaps = 11/249 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + + L + L +A L DIKK G L+ F V A G Sbjct: 1 MKINTLATWLVGVALVTAGTVAHADRLDDIKKAGVLRVATFDSNPPFGYVDAKSNHIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + +Q P N R L S ++D++ N T R + F Sbjct: 61 DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F+ K + S QL+G + GTT E+TL + F + ++ Sbjct: 116 IPYFSSGQQFLAKKG-VLKSADQLNGLRVGADKGTTNEITLREKFPKA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I IS + + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 230 Query: 240 IVSWTHYAM 248 V+ T + Sbjct: 231 FVNDTLKGL 239 >gi|290580111|ref|YP_003484503.1| putative ABC transporter glutamine binding protein [Streptococcus mutans NN2025] gi|254997010|dbj|BAH87611.1| putative ABC transporter glutamine binding protein [Streptococcus mutans NN2025] Length = 270 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 114/278 (41%), Gaps = 21/278 (7%) Query: 2 YKDFFVSILCLIILFFTSFS--------TNASILGDIKKRGFLKCGINTGLVGFAEVKA- 52 K F +S+ LI++ + + IK+ G LK G+ + F A Sbjct: 3 IKKFLISLAALIMIATGLSGLSKVNADNVTSPQVKKIKRAGVLKVGVKQDVPNFGYYNAE 62 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G ++G ++D R ++ +I ++ +P+ + R + + Q+D++ T R+ Sbjct: 63 TGKYEGMEIDIARKIAKSIGVK---LELVPVTTQTREPLMDNGQVDLVIATYTITPERQA 119 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 S + Y+D GF++ + IS +S L G +I V G TT++ L Y K H++K++ Sbjct: 120 SYSI--SKPYYYDQIGFLVRQSSKISKISDLDGLTIGVSQGATTKVNLEAYAKKHHLKFN 177 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E+ + + R DA++ D S L + +L + A + Sbjct: 178 YVQLGSFPELAISLYSKRIDAFSVDKSILTGYVSKQSK-----LLKYGFNTQEYGIATKK 232 Query: 233 GDTEWYNIVSWTHYAMVT--AEELGITQKNINQVSKDT 268 +T V++ + E + N+ D Sbjct: 233 SNTGLTKYVNYLLKKWTADKSLESIYNKHNLESAKPDK 270 >gi|315635238|ref|ZP_07890515.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] gi|315475984|gb|EFU66739.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] Length = 285 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 8/222 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L I+K G ++ G+ + F V A G +GFDV+ +A+ + D +K++++ ++ Sbjct: 38 SSLEQIQKDGKVRIGVFSDKPPFGYVDAQGKSQGFDVEIGKAIGKDLLGDENKVEFVLVD 97 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L SK++DI+ N T R+ + F G + I+ + QL Sbjct: 98 AANRAEYLLSKKVDIILANFTVTPARKEV--VDFANPYMKVALGVVSKDGSVITDLEQLK 155 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G ++ V GTT ++ +F + + FE+ E A R R DA + D + L+A Sbjct: 156 GKTLIVDKGTTADI----FFTKNYPDVKLLKFEQNTETFEALRDGRGDALSNDNTFLFAW 211 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 P V + + + +APA+ + E N ++ Sbjct: 212 AKQ--NPGYTVGVKNFGDQDVIAPAVRKDAPELLNWLNNEIQ 251 >gi|69246349|ref|ZP_00603905.1| extracellular solute-binding protein, family 3 [Enterococcus faecium DO] gi|257878163|ref|ZP_05657816.1| extracellular solute-binding protein [Enterococcus faecium 1,230,933] gi|257881053|ref|ZP_05660706.1| extracellular solute-binding protein [Enterococcus faecium 1,231,502] gi|257884714|ref|ZP_05664367.1| extracellular solute-binding protein [Enterococcus faecium 1,231,501] gi|257889638|ref|ZP_05669291.1| extracellular solute-binding protein [Enterococcus faecium 1,231,410] gi|258616331|ref|ZP_05714101.1| glutamine ABC transporter, substrate binding protein [Enterococcus faecium DO] gi|260559210|ref|ZP_05831396.1| extracellular solute-binding protein family 3 [Enterococcus faecium C68] gi|261207743|ref|ZP_05922428.1| extracellular solute-binding protein family 3 [Enterococcus faecium TC 6] gi|289565818|ref|ZP_06446260.1| ABC transporter glutamine-binding protein glnH [Enterococcus faecium D344SRF] gi|293554036|ref|ZP_06674636.1| glutamine-binding protein [Enterococcus faecium E1039] gi|293563130|ref|ZP_06677595.1| glutamine-binding protein [Enterococcus faecium E1162] gi|293569785|ref|ZP_06680872.1| glutamine-binding protein (GlnBP) [Enterococcus faecium E1071] gi|294619641|ref|ZP_06699063.1| glutamine-binding protein [Enterococcus faecium E1679] gi|294623308|ref|ZP_06702170.1| glutamine-binding protein [Enterococcus faecium U0317] gi|314939889|ref|ZP_07847095.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133a04] gi|314943736|ref|ZP_07850475.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133C] gi|314949692|ref|ZP_07853010.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0082] gi|314953238|ref|ZP_07856177.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133A] gi|314993682|ref|ZP_07859030.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133B] gi|314997401|ref|ZP_07862352.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133a01] gi|68195302|gb|EAN09753.1| extracellular solute-binding protein, family 3 [Enterococcus faecium DO] gi|257812391|gb|EEV41149.1| extracellular solute-binding protein [Enterococcus faecium 1,230,933] gi|257816711|gb|EEV44039.1| extracellular solute-binding protein [Enterococcus faecium 1,231,502] gi|257820552|gb|EEV47700.1| extracellular solute-binding protein [Enterococcus faecium 1,231,501] gi|257825998|gb|EEV52624.1| extracellular solute-binding protein [Enterococcus faecium 1,231,410] gi|260074967|gb|EEW63283.1| extracellular solute-binding protein family 3 [Enterococcus faecium C68] gi|260078126|gb|EEW65832.1| extracellular solute-binding protein family 3 [Enterococcus faecium TC 6] gi|289162361|gb|EFD10219.1| ABC transporter glutamine-binding protein glnH [Enterococcus faecium D344SRF] gi|291587533|gb|EFF19410.1| glutamine-binding protein (GlnBP) [Enterococcus faecium E1071] gi|291594115|gb|EFF25567.1| glutamine-binding protein [Enterococcus faecium E1679] gi|291597276|gb|EFF28465.1| glutamine-binding protein [Enterococcus faecium U0317] gi|291601818|gb|EFF32070.1| glutamine-binding protein [Enterococcus faecium E1039] gi|291604908|gb|EFF34377.1| glutamine-binding protein [Enterococcus faecium E1162] gi|313588536|gb|EFR67381.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133a01] gi|313591856|gb|EFR70701.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133B] gi|313594704|gb|EFR73549.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133A] gi|313597599|gb|EFR76444.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133C] gi|313640852|gb|EFS05432.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0133a04] gi|313643950|gb|EFS08530.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecium TX0082] Length = 271 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 97/250 (38%), Gaps = 15/250 (6%) Query: 2 YKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDW 56 K + +L + L N IL K + G+ F + + Sbjct: 5 KKIRLIFLLGIAFLALAGCKGNGLANEDILERSKSTNEIIWGVKYDTRLFGMMDIESRTV 64 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDVD +A++ I D K +++ + +K R L++ ID + T R+ + Sbjct: 65 QGFDVDIAKAITKKILGDNGKTEFVEVTSKTRIPLLKNGNIDAIIATMTITDERKK--QV 122 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASIC-VQAGTTTELTLADYFKAHNMKYHPIV 175 F + + GQ ++ K I SV L+ ++ G+T+ + + + Sbjct: 123 DFSDVYFDAGQALLVKKGSQIKSVDDLNASTTVLAVKGSTSAANIRQHAP----DAKILE 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E E A ++ + DA T D + L + ++ P E+ ++ + P AI +G Sbjct: 179 LENYAEAFTALQSGQGDAMTTDNAILLGIA--DENP-EYELVGGTFTNEPYGIAINKGQE 235 Query: 236 EWYNIVSWTH 245 + V+ Sbjct: 236 NFLKAVNQAL 245 >gi|48428787|gb|AAT42435.1| ABC-type amino acid transport, periplasmic component [Collimonas fungivorans Ter331] Length = 277 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 98/254 (38%), Gaps = 7/254 (2%) Query: 7 VSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + ++ I L + + +A +L I+ + G F+ V + G+ +D C Sbjct: 22 LGMVLAITLGVAATAVHAEDVLTKIRDSKTITIGYREASFPFSFVDQDKKPVGYAIDLCL 81 Query: 66 ALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 ++ A+ I Y+P+ + R + S +ID+ +T R ++F Sbjct: 82 KIADAVKQQLKLPQLNIVYVPVTSSNRIDMIASGKIDLECGSTTNNAERRK--QVSFTIA 139 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + ++ + I + L + GTT+ +L D + ++ + E Sbjct: 140 HFMASSRMLVRVEDKIKNWPDLRDKKVATTKGTTSVKSLVDRGQVRSLNMTIVEGRDHNE 199 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 DA+ D LY LK T P+ + I+ + ++ P A + +GDT + +V Sbjct: 200 SFKMVEDKAADAFVMDDVLLYGLKATAKDPAAYAIVGEPLTTEPYAIMLPKGDTSYKAVV 259 Query: 242 SWTHYAMVTAEELG 255 ++ E+ Sbjct: 260 DREMGRIIHDGEIN 273 >gi|34496730|ref|NP_900945.1| ABC transporter periplasmic-binding protein [Chromobacterium violaceum ATCC 12472] gi|34102585|gb|AAQ58950.1| probable ABC transporter, periplasmic-binding protein [Chromobacterium violaceum ATCC 12472] Length = 283 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 65/325 (20%), Positives = 110/325 (33%), Gaps = 67/325 (20%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M K +I + + TS + A L DIKK G L+ F + A G Sbjct: 17 MKK----TIALALAVALTSTAALADRLDDIKKAGVLRVAAFDSNPPFGFLDAKTRQISGL 72 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD + ++ + I N R L S + DI++ N T R+ + F Sbjct: 73 DVDVAQHIAKKLGVKLQLIP---TNPANRVPLLVSGKADIVAANFTVTDERKK--QVDFS 127 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI+ K + QL+G + V GTT E+ L + + + ++ Sbjct: 128 LPYFASGQQFIVRKG-ALQKPEQLAGLRVGVDKGTTQEVYLREKYPK----TTVVAYDDT 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R A T D S L AL +++ + P +++ A + +G+ Sbjct: 183 PLAFTALRNGNVQAITQDGSKLAALLANAPDKAKYELAPFTLTREFQAIGLPKGEARLTK 242 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 +V+ T EL + Sbjct: 243 VVNETLR------ELEKSGDAAR------------------------------------- 259 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPR 324 ++DR G +++ +PR Sbjct: 260 ---------IYDRWFGPKTKAPLPR 275 >gi|126444823|ref|YP_001061310.1| solute-binding family 1 protein [Burkholderia pseudomallei 668] gi|126456775|ref|YP_001074257.1| solute-binding family 1 protein [Burkholderia pseudomallei 1106a] gi|167722081|ref|ZP_02405317.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei DM98] gi|167826650|ref|ZP_02458121.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 9] gi|167908550|ref|ZP_02495755.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei NCTC 13177] gi|237509822|ref|ZP_04522537.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei MSHR346] gi|242313678|ref|ZP_04812695.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1106b] gi|254182839|ref|ZP_04889432.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1655] gi|126224314|gb|ABN87819.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 668] gi|126230543|gb|ABN93956.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1106a] gi|184213373|gb|EDU10416.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1655] gi|235002027|gb|EEP51451.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei MSHR346] gi|242136917|gb|EES23320.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1106b] Length = 299 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 87/261 (33%), Gaps = 8/261 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + L I+ G + G+ V F+ G Sbjct: 2 MKPLRPLLSIAVGCALAAAAHADDAGPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIG 61 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + + + I ++ +P+ ++ R +Q+ +D+ +T T R + Sbjct: 62 YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 119 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 ++F + G I+ K G+ L+G ++ AGTT E L + M I Sbjct: 120 QVSFSNSIFQYGMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 179 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ R A+ D LY K P ++VI + + + D Sbjct: 180 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 239 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + + M + E Sbjct: 240 PGFKQLADRVIARMQRSGEAE 260 >gi|53721189|ref|YP_110174.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei K96243] gi|76819782|ref|YP_336826.1| glutamate/aspartate periplasmic binding protein [Burkholderia pseudomallei 1710b] gi|124381383|ref|YP_001025039.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei NCTC 10229] gi|167818262|ref|ZP_02449942.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 91] gi|167848169|ref|ZP_02473677.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei B7210] gi|167896727|ref|ZP_02484129.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 7894] gi|167913410|ref|ZP_02500501.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 112] gi|52211603|emb|CAH37598.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei K96243] gi|76584255|gb|ABA53729.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei 1710b] Length = 299 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 88/261 (33%), Gaps = 8/261 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + + L I+ G + G+ V F+ G Sbjct: 2 MKPLRPLLSIAVGCALAAAAHANDAGPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIG 61 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + + + I ++ +P+ ++ R +Q+ +D+ +T T R + Sbjct: 62 YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 119 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 ++F + G I+ K G+ L+G ++ AGTT E L + M I Sbjct: 120 QVSFSNSIFQYGMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 179 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ R A+ D LY K P ++VI + + + D Sbjct: 180 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 239 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + + M + E Sbjct: 240 PGFKQLADRVIARMQRSGEAE 260 >gi|325062714|gb|ADY66404.1| amino acid ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 297 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 95/251 (37%), Gaps = 8/251 (3%) Query: 1 MYKDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M F + + C I + L I K ++ G F+ +G+ GF Sbjct: 1 MRISVFCLFLTCFIPTAPVQAAGEGDTLRQIAKTAKIRIGYREAEPPFSYQLPDGEVTGF 60 Query: 60 DVDFCRALSS----AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 D CRA+S + D I+Y+ RF+ ++S +IDI T R Sbjct: 61 STDLCRAISEDIRTQLKLDKLDIEYVKATPATRFILVRSGKIDIECAATTNNSERRKM-- 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + F+ K+ + S++ L+G S+ +GT L + N+ + Sbjct: 119 VDFSYPNFMTATQFLSRKQDNLKSLADLAGRSVTSASGTVNIEQLNAVNREKNLNISVMP 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGD 234 + EE A + A+ D L AL T++ P + + + +S P + D Sbjct: 179 TKTNEEAFELVVAGKASAFVMDGILLAALAATSENPDLYALSDETLSAPEPYGLVFRRND 238 Query: 235 TEWYNIVSWTH 245 + V+ + Sbjct: 239 PAFKAAVNESL 249 >gi|123443206|ref|YP_001007180.1| glutamate and aspartate transporter subunit [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090167|emb|CAL13030.1| putative amino acid-binding protein precursor [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 304 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 93/251 (37%), Gaps = 9/251 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSK 77 + L IK G + G V F+ G+ D+ + AI + Sbjct: 30 ASVDTLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIKKKLNAPDLQ 89 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ +P+ ++ R LQ+ D +T L R AF + G + K + Sbjct: 90 VKLIPITSQNRIPLLQNGTFDFECGSTTNNLER--QQQAAFSNTIFVVGTRLLTKKGSEV 147 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L+G + V +GTT+E+ L + M I + + + R A+ D Sbjct: 148 KDFKDLAGKPVVVTSGTTSEVLLNKLNEKDKMNMRIISAKDHGDSFRTLESGRAVAFMMD 207 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + L + +P + I+ S+ + + D + ++ T TA+ G+ Sbjct: 208 DALLAGERAKAKKPDQWDIVGTPQSQEAYGCMLRKNDPAFKTLLDETI---ATAQTSGVA 264 Query: 258 QKNINQVSKDT 268 +K+ ++ K+ Sbjct: 265 EKSFDRWFKNP 275 >gi|146337810|ref|YP_001202858.1| ABC transporter substrate-binding protein [Bradyrhizobium sp. ORS278] gi|146190616|emb|CAL74618.1| Putative ABC transporter (substrate binding protein) [Bradyrhizobium sp. ORS278] Length = 308 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 94/259 (36%), Gaps = 17/259 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-----------SILGDIKKRGFLKCGINTGLVGFAE 49 M V+ L + L + + L IK R + G F+ Sbjct: 1 MRGCVVVASLTVAALLACAGAQPGIAQSGAGEGLSPTLAAIKARHVVNLGYRESSPPFSF 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTD 105 + G G+ ++ C A+ I + I Y+ + + +R A+ + +ID+ +T Sbjct: 61 LDQAGRPIGYSLELCEAIVEEIGGEIDDPGLRIAYVKVTSDDRIDAVVAGRIDLECGSTT 120 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 R ++F P+ + G ++ K ++S + L G S+ V GTT E + + + Sbjct: 121 ANAERSR--QVSFSPLIFVAGTKLMVSKGSPVASATDLRGKSVVVTKGTTNEAAMREVDR 178 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 + + E+ + DA+ D L L + + I+ D +S P Sbjct: 179 KSALGLTVVTATDHEQSYQMLVDGKVDAFATDDILLSGLIARHKAQDKMRIVGDYLSYDP 238 Query: 226 LAPAIIQGDTEWYNIVSWT 244 + + + +V Sbjct: 239 YGIMFRKDEPQLAAVVERA 257 >gi|253701872|ref|YP_003023061.1| extracellular solute-binding protein family 3 [Geobacter sp. M21] gi|251776722|gb|ACT19303.1| extracellular solute-binding protein family 3 [Geobacter sp. M21] Length = 264 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 82/246 (33%), Gaps = 11/246 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L++ S +KK G L G++ G+ GFD Sbjct: 1 MKKILAILSSLLVLTLAVSAFAADGSFKRVKKEGTLTIGLDDAFPPMGYRNDKGELIGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + KI++ P AL SK+ D + T R+ + F Sbjct: 61 IDAAEEVGKRLG---IKIKWQPTAWDGVMHALNSKKFDCIWNGMTITDERKKEVA--FTK 115 Query: 121 ITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 D + +K ++ L GA + VQ G++ + + +E Sbjct: 116 PYKMDGQVAVVRFGEKKFKKLADLKGARVGVQKGSSAVEAVKKLPA---VPAGVREYEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R D D + RP + I+P I+K P A + D E Sbjct: 173 PKALLDLESKRLDTVVIDDAT--GRDFIAKRPGKFQIIPGNITKEPFGVAFRKEDVELRE 230 Query: 240 IVSWTH 245 V T Sbjct: 231 AVQKTL 236 >gi|167564787|ref|ZP_02357703.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia oklahomensis EO147] gi|167571954|ref|ZP_02364828.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia oklahomensis C6786] Length = 299 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 89/261 (34%), Gaps = 8/261 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + + L I+ G + G+ V F+ G Sbjct: 2 MKPLRPLLSIAIGCALAAAAHADDASPTLKKIRDTGIVTLGVRESSVPFSYYDQQQRTIG 61 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + I + ++ +P+ ++ R +Q+ +D+ +T T R + Sbjct: 62 YSQDIALKIVDEIKKELKRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 119 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 ++F + G I+ K G+ L+G ++ AGTT E L + M I Sbjct: 120 QVSFSNSFFQYGMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMSMQII 179 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ R A+ D LY K P ++VI + + + D Sbjct: 180 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSETYGCMLRKDD 239 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + + M + E Sbjct: 240 AGFKQLADRVIAQMQRSGEAE 260 >gi|332160868|ref|YP_004297445.1| glutamate and aspartate transporter subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665098|gb|ADZ41742.1| glutamate and aspartate transporter subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863400|emb|CBX73522.1| glutamate/aspartate periplasmic-binding protein [Yersinia enterocolitica W22703] Length = 304 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 93/251 (37%), Gaps = 9/251 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSK 77 + L IK G + G V F+ G+ D+ + AI + Sbjct: 30 ASVDTLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIKKKLNAPDLQ 89 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ +P+ ++ R LQ+ D +T L R AF + G + K + Sbjct: 90 VKLIPITSQNRIPLLQNGTFDFECGSTTNNLER--QQQAAFSNTIFVVGTRLLTKKGSEV 147 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L+G + V +GTT+E+ L + M I + + + R A+ D Sbjct: 148 KDFKDLAGKPVVVTSGTTSEVLLNKLNEKDKMNMRIISAKDHGDSFRTLESGRAVAFMMD 207 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + L + +P + I+ S+ + + D + ++ T TA+ G+ Sbjct: 208 DALLAGERAKAKKPDQWDIVGTPQSQEAYGCMLRKDDPAFKTLLDETI---ATAQTSGVA 264 Query: 258 QKNINQVSKDT 268 +K+ ++ K+ Sbjct: 265 EKSFDRWFKNP 275 >gi|167921349|ref|ZP_02508440.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei BCC215] Length = 299 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 87/261 (33%), Gaps = 8/261 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + L I+ G + G+ V F+ G Sbjct: 2 MKPLRPLLSIAVGCALAAAAHADDAGPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIG 61 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + + + I ++ +P+ ++ R +Q+ +D+ +T T R + Sbjct: 62 YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 119 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 ++F + G I+ K G+ L+G ++ AGTT E L + M I Sbjct: 120 QVSFSNSIFQYGMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 179 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ R A+ D LY K P ++VI + + + D Sbjct: 180 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 239 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + + M + E Sbjct: 240 PGFKQLADRVIARMQRSGEAE 260 >gi|149204302|ref|ZP_01881269.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. TM1035] gi|149142187|gb|EDM30234.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. TM1035] Length = 291 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 100/258 (38%), Gaps = 7/258 (2%) Query: 3 KDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + L + L I G + G V F+ + +G+ Sbjct: 7 RRVLAVAALTTGLAPAALWAQDLTGTLAKINDSGEIVIGHRESSVPFSYLNDQQQPEGYS 66 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 +D C + + +++Y+P+N K R + + ID+ +T L R + Sbjct: 67 IDLCMKVVEEVEKTLGKDIEVRYVPVNPKTRIALMANGTIDLECGSTTNNLTR--QQQVE 124 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + P+T+ G + K GISSV+ L G SI + GTT E + +A ++ + Sbjct: 125 YLPVTFVTGTKILTRKDSGISSVADLDGKSIALAQGTTNERAVKAAVEAQGLEVKILPVR 184 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R DAY+ D L+ L + P E ++ D +S P A + + D+ + Sbjct: 185 DHAEGMLSLETDRVDAYSTDHILLFGLIAKSKTPDEFAVVGDFLSFDPYALMVRRDDSAF 244 Query: 238 YNIVSWTHYAMVTAEELG 255 + + + E+ Sbjct: 245 ELVGKTALANVFRSGEIN 262 >gi|300692512|ref|YP_003753507.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum PSI07] gi|299079572|emb|CBJ52250.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Ralstonia solanacearum PSI07] Length = 298 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 108/309 (34%), Gaps = 25/309 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M ++L + + ++ L IK G + G+ + F+ G Sbjct: 1 MNLAKLATVLAAVGVLSSAAHAQELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIG 60 Query: 59 FDVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + A+ D +++ +P+ ++ R LQ+ ID+ +T L R+ Sbjct: 61 YSYDIATKIVEAVKDQLKLKDLQVKEIPVTSQNRITLLQNGTIDLECGSTTNNLERQK-- 118 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 +F + G ++ K GI + L G ++ AGTT+E L + + I Sbjct: 119 QASFTNTIFIIGTRMMVRKDSGIKDWADLKGKNVVTTAGTTSERLLRKMNDDKQLGMNII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + R A+ D + LY + ++ +++ S+ + + D Sbjct: 179 STKDHGQSFLTLESGRAVAFMMDDALLYGERAKAKTTADWIVVGKPQSREAYGCMVRKDD 238 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL-GIDKSSNIGEALGLTK 293 + + T M + + N + +++ + L+ Sbjct: 239 APFKTLADKTITGM---------------MKDGSINAEYKKWFEQPVPPKGLNLDFPLSD 283 Query: 294 DWTYRIIRH 302 D +I+ Sbjct: 284 D-MKALIKS 291 >gi|302391066|ref|YP_003826886.1| extracellular solute-binding protein family 3 [Acetohalobium arabaticum DSM 5501] gi|302203143|gb|ADL11821.1| extracellular solute-binding protein family 3 [Acetohalobium arabaticum DSM 5501] Length = 258 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 93/252 (36%), Gaps = 19/252 (7%) Query: 1 MYKDFFVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K + ++ L+ L + + + +IK+ G L G + F G Sbjct: 1 MSKRIKLFLVTLLGLALVVGVVGCTGTEEKTTFNEIKEEGKLVVGCSADYKPFEYPNEEG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFDV+ A+ + ++++ +L+SK+ D++ T R Sbjct: 61 EIVGFDVELMEAVGEELG---LEVEFKDTAFDGLIPSLKSKKFDVIVSAMTITDKRAE-- 115 Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + GQ + + I L+G + VQ GTT +L ++ Sbjct: 116 AVDFSEPYFNAGQVIAVKEGSTDIQGPEDLAGKVVGVQLGTTGDLEASEMEDIK----QV 171 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +E++ + R R DA D+ A + D P + I+ ++ A+ Sbjct: 172 KRYEKITQAFIELRNGRIDAVVNDLPVTAAYIM--DNP-DVEIIGKPFTEENYGIAMRPK 228 Query: 234 DTEWYNIVSWTH 245 D E ++ T Sbjct: 229 DDELEQKINETI 240 >gi|167614881|ref|ZP_02383516.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis Bt4] Length = 299 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 86/261 (32%), Gaps = 8/261 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + + L I+ + G+ V F+ G Sbjct: 2 MKPFRPLLSIAVGCTLAAAAHAEDASPTLKKIRDTSVVTLGVRESSVPFSYYDQRQQTIG 61 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + + + I + ++ +P+ ++ R +Q+ +D+ +T T R + Sbjct: 62 YSQEIALKIVDEIKKELNRTNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 119 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 ++F + G I K G+ L+G ++ AGTT E L + M I Sbjct: 120 QVSFSNSIFQYGMRLIAKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMSMQII 179 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ R A+ D LY K P ++VI + + D Sbjct: 180 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGSSPVSEAYGCMLRKDD 239 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + + M + E Sbjct: 240 PGFKQLADRVIARMQRSGEAE 260 >gi|83950533|ref|ZP_00959266.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseovarius nubinhibens ISM] gi|83838432|gb|EAP77728.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseovarius nubinhibens ISM] Length = 287 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 100/257 (38%), Gaps = 5/257 (1%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K F + + + L I G + G V FA + N G+ + Sbjct: 4 IKSFMAAAIAASLAVPAIAQNAGGTLEKIAASGEIVLGHRESSVPFAYLDENQKPIGYSI 63 Query: 62 DFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D C + A+ I+Y+P+N K R + + ID+ +T L R + + Sbjct: 64 DLCHKIVEAVSAELGKEISIKYVPVNPKTRIALMANGTIDLECGSTTNNLTR--QEQVEY 121 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 P T+ G ++ K GI+++ L G ++ + GTT E + + + + Sbjct: 122 LPTTFITGTKLLVRKDGGIATIDDLDGKAVALAQGTTNERAVKAAIEEKGLDVKILPVRD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R DAY+ D L+ L + P + ++ D +S P A + + D+ + Sbjct: 182 HAEGMLSLETDRVDAYSTDHILLFGLISKSKSPDDFAVVGDFLSFDPYALMVRRDDSAFE 241 Query: 239 NIVSWTHYAMVTAEELG 255 + A+ + E+ Sbjct: 242 LVGKKALAAVFRSGEIN 258 >gi|319791541|ref|YP_004153181.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315594004|gb|ADU35070.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 299 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 6/243 (2%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF--- 72 +F+ L IK G + G+ G + NG + GF D C + + Sbjct: 15 TSGAFAQANDTLAKIKASGVITEGVRESS-GLSYTLGNGQYTGFHYDVCANIIKDLEKAA 73 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 ++++ P+ ++ R +Q+ +DI +T R+ + F TY + ++ Sbjct: 74 GKKLEVKFQPVTSQNRIPLVQNGTVDIECGSTTNNATRQKDVA--FGVTTYVEETKIVVK 131 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 GI+S++ L ++ GTT T+ +A N+ + + + + R D Sbjct: 132 ANSGINSLADLKDKTVATTTGTTPLQTVRKQKRAENLSFKEVYGKDHSDSFLLLETGRAD 191 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A+ D S L AL + P ++ ILPD+++ P+ I + D + V + A + Sbjct: 192 AFVMDGSILAALAAKSKSPKDYKILPDVLAVEPIGIMIRKDDPAFKKAVDDSIKAQAKSG 251 Query: 253 ELG 255 EL Sbjct: 252 ELA 254 >gi|66046172|ref|YP_236013.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae B728a] gi|63256879|gb|AAY37975.1| extracellular solute-binding protein, family 3 [Pseudomonas syringae pv. syringae B728a] Length = 290 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 103/256 (40%), Gaps = 20/256 (7%) Query: 2 YKDFFVSILCLIILFF------------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49 +S++ +L + S ++S L IK R L G+ + F Sbjct: 4 KTALVLSLIAFTLLAGCDKPAEQKPVAKAAPSPSSSYLETIKARDKLIVGVFSDKPPFGF 63 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V G + GFD D + + + D K++++ + R LQS ++D++ N T Sbjct: 64 VNEQGQYVGFDTDLGKRFAKDLLGDEKKVEFVVVEPASRIPFLQSDKVDLILANMTVTPE 123 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R + F ++ + + ++ L+ + V GTT ++ L ++ Sbjct: 124 R--REAVDFTHPNLRVAVQALVPQASPVKTLDDLASKTTIVTTGTTADIWLT----KNHP 177 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + FE+ E A R DAY D L++ P V+ + ++P+APA Sbjct: 178 DWKVLKFEKNSESLQALANGRGDAYAQDNLVLFSWA--KKNPGYRVLEQKLGDEAPIAPA 235 Query: 230 IIQGDTEWYNIVSWTH 245 + +G+ E + V+ Sbjct: 236 VKKGNIELRDWVNTEL 251 >gi|148998282|ref|ZP_01825751.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP11-BS70] gi|168576492|ref|ZP_02722366.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae MLV-016] gi|307067225|ref|YP_003876191.1| amino acid ABC transporter/signal transduction system periplasmic domain-containing protein [Streptococcus pneumoniae AP200] gi|147755925|gb|EDK62969.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP11-BS70] gi|183577688|gb|EDT98216.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae MLV-016] gi|306408762|gb|ADM84189.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Streptococcus pneumoniae AP200] Length = 264 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 103/251 (41%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 116 FTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYTNKRT-----ALLDDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAM 248 + + Sbjct: 231 NDYLDNLVTKW 241 >gi|237737433|ref|ZP_04567914.1| extracellular solute-binding protein [Fusobacterium mortiferum ATCC 9817] gi|229421295|gb|EEO36342.1| extracellular solute-binding protein [Fusobacterium mortiferum ATCC 9817] Length = 253 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 91/248 (36%), Gaps = 11/248 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +S++ ++ +F +SF + S L +K++G+ G++ +G+ GFD Sbjct: 1 MKK-FLMSLVLMVCVFVSSFGADKS-LETVKEKGYFIVGLDATFAPMGYRDESGEIVGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + + ++ P L+SK ID++ T R + F Sbjct: 59 IDLAKEVAKRMGVEA---RFKPCEWDAIIFDLRSKNIDMVWNGMTITPARAKQVA--FTK 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 D Q K + V L+G + VQ G++ ++ D + + Sbjct: 114 PYLSDNQIIFTRKGTAPAKVQDLAGKVVGVQLGSSGAQSVEDN-PINKEIKELKKYATNV 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A R DA D + + ++ A+ + D + Sbjct: 173 EALMDLEAGRLDAVVMDEISGKYYNAKKS---TLTYSVETLADEDFGVALRKQDKALVDE 229 Query: 241 VSWTHYAM 248 ++ M Sbjct: 230 INRLLDEM 237 >gi|83746652|ref|ZP_00943701.1| Hypothetical Protein RRSL_03562 [Ralstonia solanacearum UW551] gi|207739613|ref|YP_002258006.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum IPO1609] gi|83726605|gb|EAP73734.1| Hypothetical Protein RRSL_03562 [Ralstonia solanacearum UW551] gi|206592993|emb|CAQ59899.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum IPO1609] Length = 288 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 65/318 (20%), Positives = 108/318 (33%), Gaps = 65/318 (20%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALS 68 L + + + A L DIKK G L+ G+ F A G G DVD+ + ++ Sbjct: 25 AVLAVAVLHAPAARADRLDDIKKAGVLRVGVFDANPPFGFADAKSGQPVGLDVDYAQEIA 84 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + ++ N R L + ++D+++ N T R + F + G Sbjct: 85 RKLGVK---LELRATNPANRVPLLTAGKVDLIAANFTITDERRK--QIDFSTPYFASGLQ 139 Query: 129 FIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 FI K + L G + V GTT E TL + + I ++ A Sbjct: 140 FIARKG-VLKQPDDLKKDGIRLGVDKGTTQEATLREGYP----NARVIAYDDSPLALTAL 194 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 R+ A+ D + L AL T SE I P ++++ + + +G+T+ + V Sbjct: 195 RSGAIQAFAQDGAKLGALLATLPNRSELEISPFVLTREYMGIGVPKGETQLADTVDRILQ 254 Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306 GL KD G Sbjct: 255 -------------------------------------------GLEKD---------GTA 262 Query: 307 GEMFDRNLGNQSELKIPR 324 ++DR G +S +PR Sbjct: 263 ARIYDRWFGPKSAAPLPR 280 >gi|296132709|ref|YP_003639956.1| extracellular solute-binding protein family 3 [Thermincola sp. JR] gi|296031287|gb|ADG82055.1| extracellular solute-binding protein family 3 [Thermincola potens JR] Length = 260 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 100/259 (38%), Gaps = 12/259 (4%) Query: 1 MYK---DFFVSILCLIILFFTSFSTNASILG-DIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K F +SIL L +LF T A+ + K G + F V +G+ Sbjct: 1 MKKYLKIFVLSILALSLLFAVGCGTKATTEESKGEDVKTYKVGTDAAYAPFESVAPSGEI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDVD RA++ A + +++++ + F +L+ Q DI+ T R+ + Sbjct: 61 EGFDVDIMRAIAKA---EGFEVEFVNTAWEGIFASLK-GQNDIVISAVTITDDRKKEM-- 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + + K I+S++ L G + VQ GTT + L + + F Sbjct: 115 DFSEPYFESTNYIAVPKDSNIASLNDLKGKVVAVQEGTTGDEALTKFLGKDY--RNIKRF 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + E R + DA D + N + ++ + K A+ +G+TE Sbjct: 173 KGTPEAFLELRNGKADAAVADSGVVANYVKNNPDANLKIVKDETFPKEYYGIAVAKGNTE 232 Query: 237 WYNIVSWTHYAMVTAEELG 255 ++ + E Sbjct: 233 LLAKINSGLKKIKENGEYD 251 >gi|77461510|ref|YP_351017.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77385513|gb|ABA77026.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 300 Score = 149 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 98/263 (37%), Gaps = 10/263 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDW 56 M K + ++ + ++ LG + + G V F+ V G Sbjct: 1 MQKITLLGCTLALVFGAQAQASEVPLTGTLGKVASANSITLGYRDASVPFSYVGDHTGQP 60 Query: 57 KGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+ V+ + I K++Y + ++ R +Q+ +D+ +T T R+ Sbjct: 61 MGYSVELADKIVERIKQQLALPELKVKYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQK 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F + + + GI S L G ++ AGTT E L Y H + Sbjct: 121 QVA--FSYGFIYVKGQLLTARDSGIQSFDDLRGKNVVTTAGTTNERYLKSYNLDHKLNMF 178 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + E ++ R A+ D + LY + P V++ + S+ + + + Sbjct: 179 VISAKDHGEAFQMLQSGRAAAFYMDDALLYGERAKARDPHNWVVVGEEQSREIYSCMVRK 238 Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255 D ++ +V+ + ++ E+ Sbjct: 239 DDPQFLALVNGVLADLYSSGEIN 261 >gi|296156268|ref|ZP_06839107.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295893774|gb|EFG73553.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 272 Score = 149 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 67/325 (20%), Positives = 111/325 (34%), Gaps = 64/325 (19%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M +++ +L ++ + +A L DIKK G L+ F V G Sbjct: 1 MNLRVLGAVIAGSLLVMSA-AAHADRLDDIKKAGVLRVAAFDSNPPFGFVDPKSNQIVGL 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D+ RA+++ + ++ P N R L+S ++D++ N T R+ + F Sbjct: 60 DIDYARAVANRLGVK---LEIQPTNPANRIAFLKSGKVDLVFANFTITDDRKK--EVDFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G FI K ++S QL+G I GTT E + F I ++ Sbjct: 115 IPYFASGTQFIAKKG-TLTSPQQLNGLRIGADKGTTNEQQVRAQFP----GATIIAYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA R A T D L AL + + I P IS + +G+T N Sbjct: 170 PFAFAALRTGNVQAITQDGPKLVALLAKVPDKANYEIPPFTISNDYEGVGVPKGETRLLN 229 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 +V+ T Sbjct: 230 VVNDTLKD---------------------------------------------------- 237 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPR 324 + G G+++D G +S +PR Sbjct: 238 LEAKGTAGQIYDTWFGPKSAAPLPR 262 >gi|221198481|ref|ZP_03571527.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2M] gi|221208569|ref|ZP_03581570.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2] gi|221171560|gb|EEE04006.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2] gi|221182413|gb|EEE14814.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia multivorans CGD2M] Length = 301 Score = 149 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 89/236 (37%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI----FDDPSKIQ 79 + L I++ + G V F+ V ANG GF D C + +A+ +++ Sbjct: 29 SGTLEKIRQNNLISIGHRETSVPFSYVDANGKVIGFSQDLCDRVIAAVKARTGKPDLQVR 88 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++P+ ++ R +Q+ +D+ T R + F + + + GI Sbjct: 89 FIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--FSTTFFVATTRLLTRTQSGIRD 146 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G ++ GTT+E L + M I + E + R AY D Sbjct: 147 FPDLAGKTVVTNQGTTSERLLRKMNEEKKMNMQIISAKDYGEGRLTLESGRAVAYMMDDV 206 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L ++ +P++ I+ S + + D ++ +V ++ E+ Sbjct: 207 LLAGVRQLAAKPADWQIVGTPQSSEAYGFMLRKDDPQFKALVDGVLVQLMKRGEID 262 >gi|167587241|ref|ZP_02379629.1| extracellular solute-binding protein, family 3 [Burkholderia ubonensis Bu] Length = 271 Score = 149 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 95/253 (37%), Gaps = 11/253 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + L + L + +A L DI+K G L+ F V A G Sbjct: 1 MKIHTLATWLVGVALVTAGSAAHADRLDDIRKAGVLRVATFDSNPPFGFVDAKTNHIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + +Q P N R L S ++D++ N T R + F Sbjct: 61 DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F+ K + S QL+G + GTT E+TL + + + ++ Sbjct: 116 IPYFSSGQQFLAKKG-VLKSAEQLNGLRVGADKGTTNEITLREKYPKA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I IS + + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFAISNDYMGVGVPKGETRLLG 230 Query: 240 IVSWTHYAMVTAE 252 V+ T + + Sbjct: 231 FVNDTLKGLEASG 243 >gi|310778238|ref|YP_003966571.1| amino acid ABC transporter substrate-binding protein, PAAT family [Ilyobacter polytropus DSM 2926] gi|309747561|gb|ADO82223.1| amino acid ABC transporter substrate-binding protein, PAAT family [Ilyobacter polytropus DSM 2926] Length = 262 Score = 149 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 80/251 (31%), Gaps = 11/251 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + +L + IK++G G++ +G+ GFD Sbjct: 1 MKKIVLIFLATIALL--GCGKKSTDSYDKIKEQGKFIVGLDDTFAPMGFRDESGEIVGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++S + + + P L+S ID++ T R +AF Sbjct: 59 IDLAKEVASRMGVEAE---FSPREWSSIVFELKSGNIDMVWNGMTITPER--QEQIAFSE 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + Q + I + L G I VQ G+++ + + + + Sbjct: 114 PYFANDQIIMTLADSPIQTAEDLKGKIIGVQLGSSSYTLVMKNPISESAS-EIKKYATNA 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQGDTEW 237 E A R DA D+ + L + K + + D + Sbjct: 173 EALMDLEAKRIDAVVMDVIVGEYYAAKKEAREGKDIFKSLDKALGKEDFGVGLRKEDKKL 232 Query: 238 YNIVSWTHYAM 248 + M Sbjct: 233 KKEIDKILDEM 243 >gi|304385261|ref|ZP_07367606.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Pediococcus acidilactici DSM 20284] gi|304328468|gb|EFL95689.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Pediococcus acidilactici DSM 20284] Length = 272 Score = 149 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 94/268 (35%), Gaps = 18/268 (6%) Query: 1 MYK----DFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEV 50 M K V L+I A S I+ + + G++ V Sbjct: 1 MKKLVKFSLLVMACALLIPGLAGCGKTAQNNPQPSSWKSIQAKHHVVIGLDDSFVPMGFR 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + NG G+D+D RA+ K+ + ++ L+++ +D++ T R Sbjct: 61 QKNGKLAGYDIDLARAVFKQYG---IKVDFQTIDWSMNVTELRNQTVDLIWNGLTITDER 117 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY---FKAH 167 + + F + Q ++ K + I S ++G ++ VQ+G++ + Y K Sbjct: 118 QR--AMTFSEPYLVNQQVLVVKKSQHIHSPQDMTGKTLGVQSGSSGAQDIDRYPKLLKQR 175 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 K+ P++++ +A R D P ++ ++ + A Sbjct: 176 IKKHTPVLYDTFNNAFIDLKADRIQGLLIDSVYANYYLQHLPNPGDYRVIKSGMPNEYFA 235 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG 255 I +G+ E + + EL Sbjct: 236 VGIKKGNQEVKQKIDQGIEHLRKTGELQ 263 >gi|254557099|ref|YP_003063516.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum JDM1] gi|254046026|gb|ACT62819.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum JDM1] Length = 279 Score = 149 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 89/261 (34%), Gaps = 20/261 (7%) Query: 1 MYKDFFVSILCLIILFFTSF------------STNASILGDIKKRGFLKCGINTGLVGFA 48 M K F L +++L + + IKKRG++ G++ V Sbjct: 1 MKKRLFALSLIVVMLLGMATTLSGCGQNVTKRADTQDTWSKIKKRGYVVVGLDDSFVPMG 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + +G G+D+D RA+ KI + ++ L++ ID++ Sbjct: 61 FREKSGKLVGYDIDLARAVFKLYG---IKISFQTIDWSMNATELRNGTIDLIWNGYTKNP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 RE + F + Q + KK I+S ++G ++ VQ+G++ +L + K Sbjct: 118 QREKVVA--FSNTYLKNKQVLVSLKKNHINSFDDMTGKTLGVQSGSSGYESLENNPKLLK 175 Query: 169 M---KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 K P+ ++ A R D +++ Sbjct: 176 DKIAKKTPVQYDTFTNAFLDLNAGRIKGLFIDSVYASYYIKHEANSADYQETQGTFKSED 235 Query: 226 LAPAIIQGDTEWYNIVSWTHY 246 A + +GD ++ Sbjct: 236 FAVGMRKGDKTMKRKINAGLK 256 >gi|251791764|ref|YP_003006485.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] gi|247540385|gb|ACT09006.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] Length = 278 Score = 149 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 62/328 (18%), Positives = 108/328 (32%), Gaps = 66/328 (20%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K L ++ + + A L DI+K G +K + F V + G+ Sbjct: 1 MKKSLLAFSLLAGLVSL-AGNAQADKLDDIQKAGVVKVAVFDSNPPFGYVDPQSKKLVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD +A+ A+ + ++ N R L SK++D+++ N T R + F Sbjct: 60 DVDVAQAIGKALGVN---VELRATNPANRIPLLTSKKVDLIAANFTITDERAK--QVNFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + + I GT E+TL +++ I ++ Sbjct: 115 VPYFATGQKFIARKG-VLKTPDDIKSLRIGADKGTVQEITLREHYPTAK----VISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237 A R A T D + L L + I P I+K I +G+ Sbjct: 170 PLAFTALRNGNVQAITQDDAKLVGLLGNLPAAQKADFEISPFSITKEYQGIGIPKGEDRL 229 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 V+ L ++K + Sbjct: 230 TQKVNDI-------------------------------LLNLEKQGD------------- 245 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRG 325 ++ +++R G Q+ PRG Sbjct: 246 -AVK-------IYNRWFGPQTPSAQPRG 265 >gi|152981667|ref|YP_001351969.1| solute-binding periplasmic protein of glutamate/aspartate ABC transporter [Janthinobacterium sp. Marseille] gi|151281744|gb|ABR90154.1| solute-binding periplasmic protein of glutamate/aspartate ABC transporter [Janthinobacterium sp. Marseille] Length = 300 Score = 149 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 98/245 (40%), Gaps = 6/245 (2%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L L IK + G + F+ + G+ VD C + + D Sbjct: 20 LVTVQAQDLGGTLKKIKDTNSITIGYRESSIPFSFLDDKQQPIGYAVDLCMKIVDTVKAD 79 Query: 75 ----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 K+ P+ + R L++ ID+ +T + +R ++F P + Sbjct: 80 LKLPNLKVVMQPVTSSNRIPLLRNGTIDLECGSTTNSKVR--QEQVSFGPNYFVINVTAA 137 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + K I+S+ L+G +I +GTT+ L Y K N++ I + E R Sbjct: 138 VKKTSNINSLDDLNGKTISTTSGTTSVPLLKGYKKTENIQVKEIYGKDHAEAFLLMADDR 197 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A+ D L + RP ++ ILP+ +S+ P + + + D ++ +V + A++ Sbjct: 198 AVAFVMDNILLAGQIANSKRPGDYKILPESLSQEPYSMMLRKDDPQFKALVDKSIGAVMK 257 Query: 251 AEELG 255 + E+ Sbjct: 258 SGEIN 262 >gi|89897023|ref|YP_520510.1| hypothetical protein DSY4277 [Desulfitobacterium hafniense Y51] gi|219667104|ref|YP_002457539.1| extracellular solute-binding protein family 3 [Desulfitobacterium hafniense DCB-2] gi|89336471|dbj|BAE86066.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219537364|gb|ACL19103.1| extracellular solute-binding protein family 3 [Desulfitobacterium hafniense DCB-2] Length = 278 Score = 149 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 67/277 (24%), Positives = 101/277 (36%), Gaps = 29/277 (10%) Query: 1 MYK--DFFVSILCLIILFFTSFST-------------------NASILGDIKKRGFLKCG 39 M K S+ + L S+ + + IK RG L G Sbjct: 1 MKKLGILLASVFLVGSLLAGCGSSTAQQPAQPPAQSGGGSESGAPADVQAIKDRGALSVG 60 Query: 40 INTGLVGFAEVKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98 + + GF + GF++D +AL+ IF DPSKI+ + AK R L S +D Sbjct: 61 VKVDVPGFGYKDPKTNVIDGFEIDLVKALAEEIFGDPSKIKLQAVTAKTRGPLLDSGDVD 120 Query: 99 ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158 ++ T R+ F Y DG G ++ K G S+ L G +I V T++ Sbjct: 121 MVVATFTITEDRKK--SYNFSDPYYIDGVGLLVKKAPGYKSLKDLDGKNIGVAQSATSKT 178 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 + +K F EI AA + R DA++ D S L ++L Sbjct: 179 AVQAEADKLGVKVKFQEFATYPEIKAALDSGRVDAFSVDRSILLGYI-----DDSTMLLD 233 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D S A G+ +V+ M EL Sbjct: 234 DKFSPQEYGVASKLGNDGLAKLVNDKIAEMKGNGELD 270 >gi|313891662|ref|ZP_07825269.1| ABC transporter, substrate-binding protein, family 3 [Dialister microaerophilus UPII 345-E] gi|313119940|gb|EFR43125.1| ABC transporter, substrate-binding protein, family 3 [Dialister microaerophilus UPII 345-E] Length = 265 Score = 149 bits (375), Expect = 9e-34, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 91/238 (38%), Gaps = 7/238 (2%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 ++++ +K + G++ NG+ GFDVD +A+S I + Sbjct: 20 LVAGCGSDSAKNDSTQKPKKIIAGLDDTFAPMGFRDENGNIVGFDVDIAKAVSKEIGVE- 78 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 I++ P++ + L S +ID + T RE + F + Q +++ Sbjct: 79 --IEFKPIDWASKESELNSGRIDCIWNGLSITPEREE--KMDFTNPYMNNDQIYVVMDNS 134 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S S L G IC Q G+T +L L + + A+R DA Sbjct: 135 DIKSASDLKGKRICFQEGSTVDLALNKNMDLRHSFGEIKTYPDFTSCFLDLDANRADAVL 194 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 D A P ++ LP+ +S P A + +G+ E +++ + + E Sbjct: 195 VDGIL--ADYYMTKSPDKYRRLPEKLSTEPFAIGVKKGNEEIVKMLNEGIEEVKASGE 250 >gi|220928328|ref|YP_002505237.1| extracellular solute-binding protein family 3 [Clostridium cellulolyticum H10] gi|219998656|gb|ACL75257.1| extracellular solute-binding protein family 3 [Clostridium cellulolyticum H10] Length = 284 Score = 148 bits (374), Expect = 9e-34, Method: Composition-based stats. Identities = 39/268 (14%), Positives = 86/268 (32%), Gaps = 27/268 (10%) Query: 1 MYK-DFFVSILCLIILFF--TSFSTNASI-----------------LGDIKKRGFLKCGI 40 M K ++ + L F + +K++G L G+ Sbjct: 1 MGKGRIIKALAAAMALTFLVAGCGASGDSSKSSGTAASSNIAVDESWDKVKEKGELVMGL 60 Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 + + + G+D+D + ++S + ++ P+N + L + ID + Sbjct: 61 DENFPPMGFRDEDNNIVGYDLDLAKEVASRLGVK---LKVQPINWDSKDQELNTGNIDCI 117 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 R+ + F + Q ++ ++ L G S+ +QA ++ L Sbjct: 118 WNGFSINEERKE--NILFSDPYMKNNQVVVVMADSEYNTFGDLKGKSVSLQAQSSASDAL 175 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 A + N I + + DA D + A ++ +L + Sbjct: 176 AKNAEFKNSLKDVIELKDNTLCLMDLKTGNTDAVVMDE--VVARYQIQMNSEKYRMLGES 233 Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 ++ +GD + V+ T M Sbjct: 234 LAAEEYGVGFRKGDVKLMTKVNDTLKEM 261 >gi|28378894|ref|NP_785786.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum WCFS1] gi|300769713|ref|ZP_07079596.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308181095|ref|YP_003925223.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|28271731|emb|CAD64637.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum WCFS1] gi|300492756|gb|EFK27941.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046586|gb|ADN99129.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 279 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 89/261 (34%), Gaps = 20/261 (7%) Query: 1 MYKDFFVSILCLIILFFTSF------------STNASILGDIKKRGFLKCGINTGLVGFA 48 M K F L +++L + + IKKRG++ G++ V Sbjct: 1 MKKRLFALSLIVVMLLGMATTLSGCGQNVTKRADTQDTWSKIKKRGYVVVGLDDSFVPMG 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + +G G+D+D RA+ KI + ++ L++ ID++ Sbjct: 61 FREKSGKLVGYDIDLARAVFKLYG---IKISFQTIDWSMNATELRNGTIDLIWNGYTKNP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 RE + F + Q + KK I+S ++G ++ VQ+G++ +L + K Sbjct: 118 QREKVVA--FSNTYLKNKQVLVSLKKNHINSFDDMTGKTLGVQSGSSGYESLENNPKLLK 175 Query: 169 M---KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 K P+ ++ A R D +++ Sbjct: 176 DKIAKKTPVQYDTFTNAFLDLNAGRIKGLLIDSVYASYYIKHEANSADYQETQGTFKSED 235 Query: 226 LAPAIIQGDTEWYNIVSWTHY 246 A + +GD ++ Sbjct: 236 FAVGMRKGDKTMKRKINAGLK 256 >gi|77460756|ref|YP_350263.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77384759|gb|ABA76272.1| L-glutamate-binding protein / L-aspartate-binding protein [Pseudomonas fluorescens Pf0-1] Length = 304 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 7/241 (2%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDD---- 74 + L IK+ G + G + F+ + A+G G+ D A+ AI D Sbjct: 23 AAELTGTLKKIKESGVITLGHRDASIPFSYIADASGKPVGYSHDIQLAIVEAIKKDLDLP 82 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +++Y + ++ R +Q+ +D+ +T + R + F + G + Sbjct: 83 NLQVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVDFSVGIFEIGTRLLSKAD 140 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 L G ++ AGTT+E L M + I + E + R A+ Sbjct: 141 SKYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAF 200 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L + S+ + S + +GD + V A + E+ Sbjct: 201 MMDDALLAGEAAKAKKASDWAVTGTPQSYEIYGCMMRKGDEPFKKAVDDAIKATYASGEI 260 Query: 255 G 255 Sbjct: 261 N 261 >gi|315640804|ref|ZP_07895904.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus italicus DSM 15952] gi|315483416|gb|EFU73912.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus italicus DSM 15952] Length = 268 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 103/251 (41%), Gaps = 15/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M K + + +L ++ + + + IL K+ + G+ F + ++ + Sbjct: 1 MKKIYTMLLLLATVITLGACKSSSAASQDILTTAKETNQIVWGVKNDTKLFGLMDISSRE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 KGFD+D +A++ I ++ + +K R L++ ID + T R+ Sbjct: 61 VKGFDIDIAKAITEEILGRDGNAVFVEVTSKTRIPLLKNGNIDAIIATMTITDERKK--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F + + GQ ++ K I++V L+ ++ V G+T+ AD + + Sbjct: 119 VDFSDVYFDAGQSLLVAKGSPITNVKDLTANDTVLVVKGSTS----ADNIRKAAPDVKVL 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E E A +A + DA + D + L + ND + ++ + P AI +G Sbjct: 175 EMENYSEAFTALQAGQGDAVSTDNAILLGMASENDN---YTLVGGTFTNEPYGIAINKGQ 231 Query: 235 TEWYNIVSWTH 245 + N V+ Sbjct: 232 ESFLNAVNDAL 242 >gi|262368883|ref|ZP_06062212.1| ABC glutamate/aspartate transporter [Acinetobacter johnsonii SH046] gi|262316561|gb|EEY97599.1| ABC glutamate/aspartate transporter [Acinetobacter johnsonii SH046] Length = 316 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 88/247 (35%), Gaps = 8/247 (3%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDF----CRALS 68 + ++ + L IKK G + G + F+ + G+ D A+ Sbjct: 35 AASTGADASQSGTLDKIKKSGTIVLGYRDSSIPFSYIADNPNQPVGYAHDLQLKVVEAVK 94 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + K++Y + ++ R + + +D+ +T R + F + G Sbjct: 95 QKLNMPDLKVRYNLVTSQNRIPLVSNGTVDLECGSTTNNKER--QQQVDFSVGFFEVGSR 152 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + G+ + L G + AGTT+E + + K + I + E ++ Sbjct: 153 LLTATDSGVKDFADLKGKKLVTTAGTTSERYIRQHEKELGIG-EVISAKDHAESFLMLQS 211 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R A+ D L K P++ I+ + + +GDT + +V A Sbjct: 212 GRAAAFMMDDILLAGEKSKAKDPNKWHIVGTAPIQEVYGCMLRKGDTGFKQVVDDAIKAT 271 Query: 249 VTAEELG 255 ++ E+ Sbjct: 272 YSSGEIN 278 >gi|257470564|ref|ZP_05634654.1| hypothetical protein FulcA4_14556 [Fusobacterium ulcerans ATCC 49185] Length = 256 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 90/248 (36%), Gaps = 10/248 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++ +I+ + F+ + S L +KK G+ G++ N + GFD Sbjct: 1 MKKLFMAVLVIMILASVSLFAADGS-LEKVKKDGYFTVGLDATFAPMGFRDENEEIVGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + + ++ P L+SK ID++ T R F Sbjct: 60 IDLAKEVAKRMGVEA---KFKPCEWDGIIFDLRSKNIDMVWNGMTITEQRSKQAA--FTT 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 DGQ K I+ VS+L G + VQ G++ + A +K + Sbjct: 115 PYLVDGQIIFSRKGNEINKVSELEGKVVGVQLGSSGSQAVERNAIAPKLK-EIKKYATNV 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A R DA D + + + +S A A+ + D + Sbjct: 174 EALLDLEAGRTDAVVMDAISGKYYNAKK---NTLSFSEESLSDEYFAVALRKDDKALLDE 230 Query: 241 VSWTHYAM 248 ++ M Sbjct: 231 INRLLDEM 238 >gi|295698917|ref|YP_003606810.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295438130|gb|ADG17299.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 272 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 97/247 (39%), Gaps = 11/247 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDV 61 K FV + +L S + +A L DIKK G L+ F G DV Sbjct: 2 KIKFVGAAVMGLLLAISGAAHADRLDDIKKAGVLRVATFDSNAPFGFADPKTNQIVGLDV 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D+ RA+++ + ++ P N R L+S ++D++ N T R+ + F Sbjct: 62 DYARAVANKLGVK---LEIQPTNPANRIAFLKSGKVDLVFANFTITDERKK--EVDFSTP 116 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + G FI K ++S Q++G + GTT E + F + ++ Sbjct: 117 YFASGTQFIAKKG-VLTSPQQVNGLRVGADKGTTNEQQVRAQFP----NATIVAYDDTPF 171 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AA RA A T D L AL + + I P IS + +G+T ++V Sbjct: 172 AFAALRAGNVQAITQDGPKLVALLANVPDKANYEIPPFTISNDYEGVGVPKGETRLLSVV 231 Query: 242 SWTHYAM 248 T + Sbjct: 232 DDTLKGL 238 >gi|238786077|ref|ZP_04630035.1| Glutamate/aspartate periplasmic-binding protein [Yersinia bercovieri ATCC 43970] gi|238713016|gb|EEQ05070.1| Glutamate/aspartate periplasmic-binding protein [Yersinia bercovieri ATCC 43970] Length = 309 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 93/248 (37%), Gaps = 9/248 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD----FCRALSSAIFDDPSKIQY 80 L IK G + G V F+ G+ D A+ + +++ Sbjct: 38 DTLKKIKDSGVIVVGHRESSVPFSYYDNQQKVVGYAQDYSDLIVDAVKKKLNAPDLQVKL 97 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D +T L R +F + G + K + Sbjct: 98 IPITSQNRIPLLQNGTFDFECGSTTNNLER--QQQASFSNTIFVVGTRLLTKKGSEVKDF 155 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G ++ V +GTT+E+ L + NM I + + + R A+ D + Sbjct: 156 KDLAGKTVVVTSGTTSEVLLNKLNEKDNMNMRIISAKDHGDSFRTLESGRAVAFMMDDAL 215 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + +P + I+ S+ + + D + ++ T TA+ G+ +K+ Sbjct: 216 LAGERAKAKKPDQWDIVGTAQSQEAYGCMLRKNDPAFKALLDETI---ATAQTSGVAEKS 272 Query: 261 INQVSKDT 268 ++ K+ Sbjct: 273 FDRWFKNP 280 >gi|187921593|ref|YP_001890625.1| family 3 extracellular solute-binding protein [Burkholderia phytofirmans PsJN] gi|187720031|gb|ACD21254.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 312 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 92/246 (37%), Gaps = 9/246 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFD 73 + + L I+ + + G + F+ A G+ +D + + + Sbjct: 34 AADAAPTGTLKKIQDQHVVTIGYRDASIPFSYYDAQQKPIGYSIDIANLIIDRIKAQLKQ 93 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++ +P+ ++ R LQ+ ID +T R + + F + G ++ + Sbjct: 94 GDLQVRLIPITSQNRISLLQNGTIDFECTSTTNNAAR--AQQVDFSNSFFDIGTRLLVRQ 151 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 GI + L G ++ V AGTT+E ++ + +M + I + E R A Sbjct: 152 NSGIHDFADLKGKTVVVGAGTTSEKSIRNMNVEKSMGMNIISAKDHSESFLMLSTGRAKA 211 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 D + L + RP ++ I+ S + + D + ++ A+ AE Sbjct: 212 MMMDDALLAGERAKTSRPEDYAIVGTPQSFEAYGCMLRKNDAQLKALMDA---AIADAER 268 Query: 254 LGITQK 259 G+ Sbjct: 269 SGVATA 274 >gi|313673774|ref|YP_004051885.1| amino acid abc transporter substrate-binding protein, paat family [Calditerrivibrio nitroreducens DSM 19672] gi|312940530|gb|ADR19722.1| amino acid ABC transporter substrate-binding protein, PAAT family [Calditerrivibrio nitroreducens DSM 19672] Length = 268 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 85/250 (34%), Gaps = 14/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K FV L + + S L I KR L+ G+ G + F G+ Sbjct: 1 MKKLLFVIFSLLFVASLFAADMTVWEKSTLNSIIKRKELRVGLEAGYMPFELKDKKGNII 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD + ++ + + + AL + + DI+ T R ++ + Sbjct: 61 GFDVDIAKEMAKELGVK---LTLVNTAWDGIIPALLTNKFDIIMSGMTITPQR--NMQVN 115 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F GQ ++ K I S L+ V A K K + Sbjct: 116 FADPYIIVGQTILIRKDLAGKIKSYKDLNDPKYTVVTKLGVTADFA--TKKLMPKAKLRL 173 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 FE +E + DA+ D+ N L + PLA AI +GD Sbjct: 174 FETEQEAAMEVINGKADAFVYDLPYNAIFYAQNKNKLVF--LDKPFTYEPLAWAINKGDP 231 Query: 236 EWYNIVSWTH 245 ++ N ++ Sbjct: 232 DFLNWLNNFL 241 >gi|289168422|ref|YP_003446691.1| ABC-type amino acid transporter, substrate-binding protein [Streptococcus mitis B6] gi|288907989|emb|CBJ22829.1| ABC-type amino acid transporter, substrate-binding protein [Streptococcus mitis B6] Length = 264 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 104/251 (41%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + T+ A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLTATKPVQADTSVADIQKRGELVVGVKQDVPNFGYKNPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + K++Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKVRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 116 FTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDRSILSGYTSKRT-----ALLDDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAM 248 + + Sbjct: 231 NDYLDNLVTKW 241 >gi|310827749|ref|YP_003960106.1| hypothetical protein ELI_2160 [Eubacterium limosum KIST612] gi|308739483|gb|ADO37143.1| hypothetical protein ELI_2160 [Eubacterium limosum KIST612] Length = 273 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 86/248 (34%), Gaps = 10/248 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + L+++ + + D G LK G N V F N + GF Sbjct: 3 MKKKLVGVSVALMLVASLTLAGCGGKTAEDPLADGVLKIGTNATYVPFEYRDENNEMVGF 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D A++ + ++ F L S Q +++ T T R+ + + Sbjct: 63 DIDMGNAIAEELGVKAE---WVDTGFDGIFNGLTSNQYEMIIAGTSITEERQKTFNM--S 117 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 +G + + L G + VQ TT++ A+ + + F+ Sbjct: 118 SPYTANGIVIVSRNDGTPAKTADDLKGKKVGVQIETTSD-YAAEKMIENGTDMNLSKFDA 176 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + A D D T+ +P + I + +S P+ + + DTE+ Sbjct: 177 MLDAFTALEGKTIDYILTDKP--VGQFYTSKKPDVYSITSETLSNEPIGITMRKNDTEFS 234 Query: 239 NIVSWTHY 246 + T Sbjct: 235 QKIEETLQ 242 >gi|299770480|ref|YP_003732506.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter sp. DR1] gi|298700568|gb|ADI91133.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter sp. DR1] Length = 297 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 93/253 (36%), Gaps = 10/253 (3%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + +S L + TS A L IK G + G + V A G Sbjct: 1 MKRSATSLIISTFMLCTVGATSQIQAADTLAKIKSSGKIVIGHRESSDPISYVVA-GKPV 59 Query: 58 GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ VD C + + K++Y + + R L + ID+ T + R+ Sbjct: 60 GYAVDICNQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQEQ 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +G F Y + GI S++ L+G ++ GTT++ + K ++ Sbjct: 120 VG--FSTNYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQSINVQN 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + A + R A+ D + L L + P I+ ++S P + + Sbjct: 178 IYGKDHADSFAMMASGRAAAFVMDDNILAGLVAKSSTPKAFAIVGPVLSSEPYGIMLAKD 237 Query: 234 DTEWYNIVSWTHY 246 D ++ I T Sbjct: 238 DPKFKAIADRTVN 250 >gi|271499712|ref|YP_003332737.1| family 3 extracellular solute-binding protein [Dickeya dadantii Ech586] gi|270343267|gb|ACZ76032.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech586] Length = 297 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 86/235 (36%), Gaps = 6/235 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD----FCRALSSAIFDDPSKIQY 80 L IK G + G V F+ G+ A+ + +++ Sbjct: 27 GTLKKIKDNGVITIGHRESSVPFSYYDNQQKVVGYSQAYSDKIVEAVRKKLDAPNLQVKL 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D+ +T L R +AF + G + K + Sbjct: 87 IPITSQNRIPLLQNGTYDLECGSTTNNLER--QQQVAFSDTIFIIGTRLLTKKDSDVKDF 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 S L+G ++ V +GTT+E+ L + + I + + + R A+ D + Sbjct: 145 SDLAGKAVVVTSGTTSEVLLNKMNEEKKLNMRIISAKDHGDSFRTLESGRAVAFMMDDAL 204 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + P E VI S+ + + D ++ +V T + T+ E Sbjct: 205 LAGERAKAKAPDEWVITGTPQSREAYGCMLRKDDPQFKQLVDATISQVQTSGEAE 259 >gi|160896811|ref|YP_001562393.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160362395|gb|ABX34008.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 299 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 101/254 (39%), Gaps = 8/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +I + ++F+ L IK G + G+ G NG + GF Sbjct: 1 MKKHLL-AIAVTALAAGSAFAQAGDTLAKIKSSGAVTLGVRESS-GLGYTLGNGKYVGFH 58 Query: 61 VDFCRALSS----AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + + + I+Y P+ ++ R + + +D+ +T + R+ + Sbjct: 59 TEMGERVLADIQKELGLAKLDIKYQPVTSQNRIPLVTNGTVDLECGSTTNSQARQKDVA- 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F TY + + GI+ + L+G +I GTT+ TL +A + + ++ Sbjct: 118 -FAVTTYVEEVRIAVKGNSGITGIKDLNGKTIVTTTGTTSVQTLRKNKRADGLTFKEVMG 176 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R DA+ D S L A + P+++ I+ + +S P+A + + D Sbjct: 177 KDHADSFLMLETGRADAFIMDGSILAANISKSKAPADYKIVGETLSVEPIACMLRKDDPA 236 Query: 237 WYNIVSWTHYAMVT 250 + V + + Sbjct: 237 FKKAVDDSIKRQIA 250 >gi|15893671|ref|NP_347020.1| periplasmic amino acid-binding protein [Clostridium acetobutylicum ATCC 824] gi|15023229|gb|AAK78360.1|AE007552_10 Periplasmic amino acid-binding protein [Clostridium acetobutylicum ATCC 824] gi|325507793|gb|ADZ19429.1| Periplasmic amino acid-binding protein [Clostridium acetobutylicum EA 2018] Length = 272 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 94/257 (36%), Gaps = 22/257 (8%) Query: 1 MYKD-------FFVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEV 50 M K +++ + +L S + ++S L +KK G LK G++ Sbjct: 1 MKKSVKKIMAVILTAVIGVGLLAGCSSTGSSSNDESLSKVKKAGVLKVGLSDDYPPMEFR 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 +N GFD+D A+ + +Q + + F+AL++K+ D++ T R Sbjct: 61 DSNNKVSGFDIDMINAIGKKMGVK---VQIVTNSFDGIFVALKAKKFDMVQSCVSITDER 117 Query: 111 EISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + + L F + G + K I L G + QAGTT E L + Sbjct: 118 KST--LLFSDPYIYGGVAVFVKKSNTTIKKPEDLKGKVVGCQAGTTAEDALKKFNGLK-- 173 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 +++ + +R +A D + T P ++ + + K P+ A Sbjct: 174 --ETKKYQQTTDAFLDLENNRIEAVVADP--MVGDYYTTKNPGKYEKISKYLGKEPVGAA 229 Query: 230 IIQGDTEWYNIVSWTHY 246 + D + + Sbjct: 230 FRKQDKTLKDAYQKAYN 246 >gi|322508165|gb|ADX03619.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii 1656-2] Length = 297 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 93/253 (36%), Gaps = 10/253 (3%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + VS + L + TS A L IK G + G + V A G Sbjct: 1 MKRSATSLIVSTVMLCTVGATSQIQAADTLAKIKSTGKIVIGHRESSDPISYVVA-GKPV 59 Query: 58 GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ VD C + + K++Y + + R L + ID+ T + R+ Sbjct: 60 GYAVDICNQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQQQ 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +G F Y + GI S++ L+G ++ GTT++ + K + Sbjct: 120 VG--FSTNYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQAINVQN 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + A + R A+ D + L L + P I+ ++S P I + Sbjct: 178 IYGKDHADSFAMMASGRAAAFVMDDNILAGLIAKSSTPKAFAIVGPVLSSEPYGIMIAKD 237 Query: 234 DTEWYNIVSWTHY 246 D ++ I T Sbjct: 238 DPKFKAIADRTVN 250 >gi|257093422|ref|YP_003167063.1| family 3 extracellular solute-binding protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045946|gb|ACV35134.1| extracellular solute-binding protein family 3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 301 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 89/246 (36%), Gaps = 7/246 (2%) Query: 15 LFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSS 69 + T+ + + L IK G + G + F+ G+ + A+ + Sbjct: 19 MSITALAQDLTGTLKKIKDTGAITLGHRESSIPFSYYDDKQQVIGYSQEMMLKAVDAIKA 78 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + I+ +P+ ++ R +Q+ +D+ +T T R+ ++F + G Sbjct: 79 ELKLAKLDIKLMPVTSENRITLVQNGSVDLECGSTTNTTERQK--QVSFSNSIFVVGTRM 136 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + GI L+G ++ AGTT+E L + +NMK I + E Sbjct: 137 LTRSNSGIKDFPDLAGKTVVTTAGTTSERLLRKMNEDNNMKVKIISAKDHGESFLTLETG 196 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R A+ D LY +E ++ S + + D +V ++ Sbjct: 197 RATAFVMDEVLLYGETAKAKNINEWAVVGTPQSYEAYGCMMRKDDPALKKVVDAALAKVM 256 Query: 250 TAEELG 255 T+ E Sbjct: 257 TSGEAE 262 >gi|270290989|ref|ZP_06197212.1| polar amino acid transport system substrate-binding protein [Pediococcus acidilactici 7_4] gi|270280385|gb|EFA26220.1| polar amino acid transport system substrate-binding protein [Pediococcus acidilactici 7_4] Length = 272 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 95/268 (35%), Gaps = 18/268 (6%) Query: 1 MYK----DFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEV 50 M K V L+I A S I+ + + G++ V Sbjct: 1 MKKLVKFSLLVMACALLIPGLAGCGKTAQNNPQPSSWKSIQAKHHVVIGLDDSFVPMGFR 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + NG G+D+D RA+ K+ + ++ L+++ +D++ T R Sbjct: 61 QKNGKLAGYDIDLARAVFKQYG---IKVDFQTIDWSMNVTELRNQTVDLIWNGLTITDER 117 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY---FKAH 167 + ++ F + Q ++ K + I S ++G ++ VQ+G++ + + K Sbjct: 118 QRAMA--FSEPYLVNQQVLVVKKSQHIHSPQDMTGKTLGVQSGSSGAQDIDRFPKLLKQR 175 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 K+ P++++ +A R D P ++ ++ + A Sbjct: 176 IKKHTPVLYDTFNNAFIDLKADRIQGLLIDSVYANYYLQHLPNPGDYRVIKSGMPNEYFA 235 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG 255 I +G+ E + + EL Sbjct: 236 VGIKKGNQEVKQKIDQGIEHLRKTGELQ 263 >gi|169834023|ref|YP_001694088.1| glutamine ABC transporter substrate-binding protein [Streptococcus pneumoniae Hungary19A-6] gi|168996525|gb|ACA37137.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae Hungary19A-6] Length = 264 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEF---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 116 FTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDHSILSGYTSKRT-----ALLNDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAM 248 + + Sbjct: 231 NDYLDTLVTKW 241 >gi|325524104|gb|EGD02268.1| extracellular solute-binding protein [Burkholderia sp. TJI49] Length = 298 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 83/251 (33%), Gaps = 8/251 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + L + L IK G + GI V F+ G Sbjct: 1 MDRRIRWLAVALSCALAGAAHAQALTGTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIG 60 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + + + ++ +P+ ++ R LQ+ ID +T TL R+ Sbjct: 61 YSRDIAARIIEQLKTELNLPGLAVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + G F K G+ + L+G ++ AGT+ E L + M I Sbjct: 121 A--FSNSIFLYGIRFSTRKDSGVKDFADLAGKTVATTAGTSDERLLRKLNEEKGMNMTII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D LY + P + + + A + + D Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVTGTPLVHENYACMMRRDD 238 Query: 235 TEWYNIVSWTH 245 + ++V Sbjct: 239 PAFKHVVDGVI 249 >gi|170751122|ref|YP_001757382.1| extracellular solute-binding protein [Methylobacterium radiotolerans JCM 2831] gi|170657644|gb|ACB26699.1| extracellular solute-binding protein family 3 [Methylobacterium radiotolerans JCM 2831] Length = 299 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 92/260 (35%), Gaps = 10/260 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 + + + + A L +K G + G V F+ + N G Sbjct: 2 RILKHAAIAATMTLALMTGAKADDLTGTLKKVKDTGTITLGYRESSVPFSYLDGNQKPVG 61 Query: 59 FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 F +D C A+ + + K+ Y P+N+ R + + +D+ +T L+R+ + Sbjct: 62 FSIDVCGKVVEAVKTKLGMPDLKVAYTPVNSATRLPLVANGTVDLECGSTANQLVRQKQV 121 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F T+ ++ GI++ L + V AGT T L + +K Sbjct: 122 A--FSVSTFVAQFKWLTRSDSGITTPDDLKSKMVAVTAGTNTSQFLNKLNQEDGLKLTIA 179 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D L LK PS IL S P A + D Sbjct: 180 QGKDHAESFLLVETGRAAAFMEDDILLAGLKANAKDPSRFKILDKAYSADPYALMFRRED 239 Query: 235 TEWYNIVSWTHYAMVTAEEL 254 E+ +V T ++ + E Sbjct: 240 PEFKALVDETLIGLMRSGEF 259 >gi|312797284|ref|YP_004030206.1| glutamate/aspartate-binding protein [Burkholderia rhizoxinica HKI 454] gi|312169059|emb|CBW76062.1| Glutamate/aspartate-binding protein [Burkholderia rhizoxinica HKI 454] Length = 297 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 90/237 (37%), Gaps = 6/237 (2%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PS 76 + L IK G + G + F+ + G+ + + A+ + Sbjct: 22 AQEMETLKKIKDSGVIALGHRESSIPFSYYDEKQNVVGYSQELALKIVEAVKHELKTPDL 81 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K++ +P+ ++ R +Q+ IDI +T L R+ F + G + K G Sbjct: 82 KVKLIPITSQNRIPLVQNGTIDIECGSTTNNLDRQKQAA--FSNTIFVVGTRLMTKKDSG 139 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I + L G ++ AGTT+E L + HNM + I + E R A+ Sbjct: 140 IKDFADLKGKTVVTTAGTTSERLLRKLNQDHNMGMNIISAKDHGESFLTLSTGRAAAFMM 199 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 D + L + + P + VI+ S + +GD + +V + T+ E Sbjct: 200 DDALLAGERAKSSHPGDFVIVGTPQSHEAYGCMMRKGDPAFKKVVDAAIAKVETSGE 256 >gi|167588750|ref|ZP_02381138.1| extracellular solute-binding protein family 3 [Burkholderia ubonensis Bu] Length = 302 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 83/255 (32%), Gaps = 12/255 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTN------ASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + + + L + + L IK G + GI V F+ Sbjct: 1 MDRRYRWLAVTLSFALPCALAGAAHAQALTGTLKKIKDTGVVSLGIRESSVPFSYSDNQQ 60 Query: 55 DWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G+ D + + + ++ +P+ ++ R LQ+ ID +T TL R Sbjct: 61 KNIGYSRDIASRIVEQLKTELNLPGLAVKEIPITSQNRIPLLQNGTIDFECGSTTNTLER 120 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + F + G F K G+ L+G ++ AGT+ E L + M Sbjct: 121 QKQAA--FSNSIFLYGIRFSTRKDSGVKDFPDLAGKTVATTAGTSDERLLRKLNEEKGMN 178 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 I + E R A+ D LY + P + + + A + Sbjct: 179 MTIISAKDHAEAFMNVTTGRAVAFVMDEPLLYGELAKDRNPGAYTVTGTPLVHENYACMM 238 Query: 231 IQGDTEWYNIVSWTH 245 + D + +V Sbjct: 239 RRDDPAFKRVVDGVI 253 >gi|149005718|ref|ZP_01829457.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP18-BS74] gi|225856308|ref|YP_002737819.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae P1031] gi|303260101|ref|ZP_07346074.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP-BS293] gi|303261285|ref|ZP_07347233.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS292] gi|303263950|ref|ZP_07349871.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS397] gi|303265941|ref|ZP_07351837.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS457] gi|303268323|ref|ZP_07354120.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS458] gi|147762658|gb|EDK69618.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP18-BS74] gi|225724646|gb|ACO20498.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae P1031] gi|302637419|gb|EFL67906.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS292] gi|302638796|gb|EFL69258.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP-BS293] gi|302642161|gb|EFL72511.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS458] gi|302644525|gb|EFL74776.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS457] gi|302646355|gb|EFL76581.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS397] Length = 264 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 104/251 (41%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 116 FTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDHSILSGYTSKRT-----ALLDDSFKPSDYSIVTKKSNTEL 230 Query: 238 YNIVSWTHYAM 248 + + Sbjct: 231 NDYLDNLVTKW 241 >gi|260550662|ref|ZP_05824871.1| glutamate/aspartate transporter [Acinetobacter sp. RUH2624] gi|260406373|gb|EEW99856.1| glutamate/aspartate transporter [Acinetobacter sp. RUH2624] Length = 297 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 93/253 (36%), Gaps = 10/253 (3%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + VS + L + TS A L IK G + G + V G Sbjct: 1 MKRSATSLIVSTIMLCTVGATSQIQAADTLAKIKSTGKIVIGHRESSDPISYVVG-GKPV 59 Query: 58 GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ VD C + + K++Y + + R L + ID+ T + R+ Sbjct: 60 GYAVDICNQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQQQ 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +G F Y + GI S++ L+G ++ GTT++ + K ++ Sbjct: 120 VG--FSTNYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQSLNVQN 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + A + R A+ D + L L + P I+ ++S P I + Sbjct: 178 IYGKDHSDSFAMMASGRAAAFVMDDNILAGLIAKSSTPKAFAIVGPVLSSEPYGIMIAKD 237 Query: 234 DTEWYNIVSWTHY 246 D ++ I T Sbjct: 238 DPKFKAIADRTVN 250 >gi|169796221|ref|YP_001714014.1| glutamate/aspartate ABC transporter substrate-binding protein [Acinetobacter baumannii AYE] gi|184157850|ref|YP_001846189.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii ACICU] gi|213157045|ref|YP_002319090.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Acinetobacter baumannii AB0057] gi|215483676|ref|YP_002325897.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter baumannii AB307-0294] gi|239502273|ref|ZP_04661583.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter baumannii AB900] gi|260555283|ref|ZP_05827504.1| glutamate/aspartate transporter [Acinetobacter baumannii ATCC 19606] gi|294838744|ref|ZP_06783427.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter sp. 6013113] gi|294841311|ref|ZP_06785994.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter sp. 6014059] gi|294859044|ref|ZP_06796813.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter sp. 6013150] gi|301347722|ref|ZP_07228463.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter baumannii AB056] gi|301512792|ref|ZP_07238029.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter baumannii AB058] gi|301596773|ref|ZP_07241781.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter baumannii AB059] gi|169149148|emb|CAM87027.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) [Acinetobacter baumannii AYE] gi|183209444|gb|ACC56842.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Acinetobacter baumannii ACICU] gi|193077140|gb|ABO11918.2| glutamate/aspartate transport protein [Acinetobacter baumannii ATCC 17978] gi|213056205|gb|ACJ41107.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Acinetobacter baumannii AB0057] gi|213988773|gb|ACJ59072.1| Glutamate/aspartate periplasmic-binding protein precursor [Acinetobacter baumannii AB307-0294] gi|260411825|gb|EEX05122.1| glutamate/aspartate transporter [Acinetobacter baumannii ATCC 19606] gi|323517739|gb|ADX92120.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii TCDC-AB0715] Length = 297 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 93/253 (36%), Gaps = 10/253 (3%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + VS + L + TS A L IK G + G + V A G Sbjct: 1 MKRSATSLIVSTVMLCTVGATSQIQAADTLAKIKSTGKIVIGHRESSDPISYVVA-GKPV 59 Query: 58 GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ VD C + + K++Y + + R L + ID+ T + R+ Sbjct: 60 GYAVDICNQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQQQ 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +G F Y + GI S++ L+G ++ GTT++ + K + Sbjct: 120 VG--FSTNYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQAINVQN 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + A + R A+ D + L L + P I+ ++S P I + Sbjct: 178 IYGKDHADSFAMMASGRAAAFVMDDNILAGLIAKSSTPKAFAIVGPVLSSEPYGIMIAKD 237 Query: 234 DTEWYNIVSWTHY 246 D ++ I T Sbjct: 238 DPKFKAIADRTVN 250 >gi|254173137|ref|ZP_04879810.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Thermococcus sp. AM4] gi|214032546|gb|EEB73375.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Thermococcus sp. AM4] Length = 253 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 87/260 (33%), Gaps = 21/260 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M +L L++ + S + L G + F G+ Sbjct: 1 MNGKIIGGLLVLMLAAAVASSGCIGGGSKEKV-----LIVGTSADFPPFEYKDPQTGNIT 55 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D + ++ D ++ ++ ALQ+ ++D++ T R+ + Sbjct: 56 GFDIDLIKMVAKKAGYDK--VEIKDMDFDSLIPALQTGKVDVVIAGMTITEKRK--QVVD 111 Query: 118 FRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + Q ++ K I+S+ L G I V+ GTT + + D+ + Sbjct: 112 FSIPYWKADQAVVVRKDSDIAINSLDDLKGKVIGVEKGTTGAIYIKDHL---GDQVTLKE 168 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + A + D D + ++ I + A+ +G+ Sbjct: 169 YNSYVAALQALLNGQVDVLVIDSPV----ANMFTNKYDVKVVYTINTNEHYGIAVKKGNK 224 Query: 236 EWYNIVSWTHYAMVTAEELG 255 E + ++ ++ + E Sbjct: 225 ELLDKINKALQDIMNSPEWN 244 >gi|307126808|ref|YP_003878839.1| glutamine ABC transporter substrate-binding protein/Major cell binding factor [Streptococcus pneumoniae 670-6B] gi|306483870|gb|ADM90739.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor [Streptococcus pneumoniae 670-6B] Length = 269 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 104/251 (41%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 116 FTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR DA++ D S L +L D S + + +TE Sbjct: 176 SYPELITSLHAHRIDAFSVDHSILSGYTSKRT-----ALLDDSFKPSDYSIVTKKSNTEL 230 Query: 238 YNIVSWTHYAM 248 + + Sbjct: 231 NDYLDNLVTKW 241 >gi|170696121|ref|ZP_02887256.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170138936|gb|EDT07129.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 272 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 99/247 (40%), Gaps = 12/247 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M +++ +L ++ + +A L DIKK G L+ F V G Sbjct: 1 MNLRVLGAVIAGSLLVMSA-AAHADRLDDIKKAGVLRVAAFDSNPPFGFVDPKSNQIVGL 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ RAL++ + ++ P N R L+S ++D++ N T R+ + F Sbjct: 60 DVDYARALATRLGVK---LEIQPTNPANRIAFLKSGKVDLVFANFTITDDRKK--EVDFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G FI K ++S QL+G I GTT E + F + I ++ Sbjct: 115 IPYFASGTQFIAKKG-TLTSPQQLNGLRIGADKGTTNEQQVRAQFPSA----TIIAYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA R A T D L AL + + I P IS + +G+T N Sbjct: 170 PFAFAALRTGNVQAITQDGPKLVALLAKVPDKANYEIPPFTISNDYEGVGVPKGETRLLN 229 Query: 240 IVSWTHY 246 +V+ T Sbjct: 230 VVNDTLK 236 >gi|253582766|ref|ZP_04859986.1| extracellular solute-binding protein [Fusobacterium varium ATCC 27725] gi|251835342|gb|EES63883.1| extracellular solute-binding protein [Fusobacterium varium ATCC 27725] Length = 256 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 90/248 (36%), Gaps = 10/248 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++ ++ + F+ + S L +KK G+ G++ N + GFD Sbjct: 1 MKKLFMAVLVIMVSASISLFAADNS-LEKVKKDGYFTVGLDATFAPMGFRDENEEIVGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + + +++ P L+SK ID++ T R F Sbjct: 60 IDLAKEVAKRMGVE---VKFKPCEWDGIIFDLRSKNIDMVWNGMTITEERSKQAA--FST 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 DGQ K I+ VS+L G + VQ G++ + A +K + Sbjct: 115 PYLVDGQIIFSRKGNEINKVSELEGKVVGVQLGSSGAQAVERNAIAPKLKG-IKKYATNV 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A R DA D + + + +S A A+ + D + Sbjct: 174 EALLDLEAGRTDAVVMDAISGKYYNAKK---NTLSFSEESLSDEYFAIALRKDDKALLDE 230 Query: 241 VSWTHYAM 248 ++ M Sbjct: 231 INRLLDEM 238 >gi|237798757|ref|ZP_04587218.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021610|gb|EGI01667.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 308 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 84/236 (35%), Gaps = 7/236 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 L IK+ G + G + F+ + A+G G+ D + AI D K++ Sbjct: 32 GTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHDIQLKIVEAIKKDLDMPALKVK 91 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y + ++ R +Q+ +D+ +T + R+ + F + G + K Sbjct: 92 YNLVTSQTRIPLVQNGTVDVECGSTTNNVERQK--QVDFSTGIFEVGTRLLSKKDSSYKD 149 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ AGTT+E + M + I + E + R A+ D + Sbjct: 150 FDDLKGKNVVTTAGTTSERIIKAMNADKQMGMNVISAKDHGESFQMLESGRAVAFMMDDA 209 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L +P + + S + +GD + V A + ++ Sbjct: 210 LLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATFKSGDIN 265 >gi|91789746|ref|YP_550698.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91698971|gb|ABE45800.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 298 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 48/243 (19%), Positives = 106/243 (43%), Gaps = 6/243 (2%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---F 72 + + + +K G + G+ G + +G + G+ VD C+ + + + Sbjct: 15 TGGAIAQANDTIAKVKASGVVTMGVRDSS-GLSFTLGDGKYAGYHVDVCQRILARLEKTV 73 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +++YLP+ ++ R +Q+ +DI +T R+ + F T+ + + Sbjct: 74 GKKLEVKYLPVTSQNRIPLVQNGTVDIECGSTTNNATRQKDVA--FAVTTFVEEVRIAVK 131 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 GI+S++QL+G S+ GTT+ TL +A + + + + + + R D Sbjct: 132 ADSGITSIAQLNGKSVATTTGTTSVQTLRKNERATGIDFKEVFGKDHSDSFLLLESGRAD 191 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A+ D S L + + P+ I+ +++S P+A + + D + + T ++ + Sbjct: 192 AFVMDGSILASNIANSKNPAGFKIVGEVLSVEPIAIMMRKDDPAFKKLSDDTIKDLIKSG 251 Query: 253 ELG 255 EL Sbjct: 252 ELA 254 >gi|326315074|ref|YP_004232746.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323371910|gb|ADX44179.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 305 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 105/246 (42%), Gaps = 8/246 (3%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFC----RALSSA 70 + + L IK+ G + G + F+ G + GF D C A+ + Sbjct: 24 GAAASAQEIDTLARIKQTGVITIGSRDSSIPFSYSPKGGSEPVGFSNDICLKIVDAVKAK 83 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + ++QY LN+ R +Q+ +D+ T +++R+ + F P + G Sbjct: 84 LGLPALRVQYTLLNSLNRIPLMQNGTVDLDCATTTNSVVRQQMVA--FAPSHFVAGITVA 141 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + K GI+S+S L+G ++ AG+T+ L Y +A ++ + + + R Sbjct: 142 VKKNSGINSLSDLAGKTVATVAGSTSVQLLRTYKRAEALEVRELSGKDTADAFLLLANGR 201 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 DAY D L L ++ P E+ +L D++ + P + D ++ +V T ++ Sbjct: 202 ADAYVLDDVQLAGLIASSPNPGEYRMLRDVVLRQEPYGIMFRKNDPQFEALVDETVTQLM 261 Query: 250 TAEELG 255 + ++ Sbjct: 262 KSGDME 267 >gi|161507099|ref|YP_001577053.1| glutamine ABC transporter [Lactobacillus helveticus DPC 4571] gi|160348088|gb|ABX26762.1| Glutamine ABC transporter [Lactobacillus helveticus DPC 4571] Length = 272 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 96/251 (38%), Gaps = 14/251 (5%) Query: 1 MYKDFFV--SILCLIILFFTSFSTNASIL--GDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M K FF+ ++ + + ++ S N + +K + G+ F + G Sbjct: 1 MKKRFFLPTLLIGIALFTLSACSQNKKQIVYQTVKSTKTINWGVKADTPLFGSMNIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GF++D +AL+ + + +K ++ A + L+++ +D + T RE Sbjct: 61 INGFEIDLAKALTKEMLSNNAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPEREK--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + GQ + K I +V L+ + V GTT + + + Sbjct: 119 VDFSKPYFPAGQSITVAKNSKIKNVKDLNNKKVLVVKGTTAADAVKKFAPKA----EILQ 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + AA +A + DA+ D L S + ++ + P A+ +G T Sbjct: 175 FDDYGQAFAALKAGQGDAFVTDNGILVG---ILRDSSGYKLVGGNFTNQPYGIAVNKGQT 231 Query: 236 EWYNIVSWTHY 246 E ++ Sbjct: 232 EMDKQINLALT 242 >gi|50085186|ref|YP_046696.1| glutamate/aspartate ABC transporter substrate-binding protein [Acinetobacter sp. ADP1] gi|49531162|emb|CAG68874.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) [Acinetobacter sp. ADP1] Length = 297 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 95/262 (36%), Gaps = 10/262 (3%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M VS + + + A L IK G + G + V A G Sbjct: 1 MKHSATSLLVSAFMICTVGGATQVQAADTLAKIKSSGKIIIGHRESSDPISYVVA-GKPV 59 Query: 58 GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ VD C + + K++Y + + R L S ID+ T + R+ Sbjct: 60 GYAVDICNNFANDIKKELKMPNLKVEYKAVTSSTRIPELLSGNIDMECGTTTNSKQRQQQ 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +G F Y + GI S++ L+G ++ GTT++ + K ++ Sbjct: 120 VG--FSTNYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQSINVQN 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + A + R A+ D + L L + P E I+ ++S P I + Sbjct: 178 IYGKDHADSFAMMASGRAAAFVMDDNILAGLIAKSSNPKEFAIVGPVLSSEPYGIMIAKD 237 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 D ++ + T M ++ Sbjct: 238 DPKFKALADRTVTGMWKTGQMD 259 >gi|55823483|ref|YP_141924.1| amino acid (glutamine) ABC transporter substrate binding protein [Streptococcus thermophilus CNRZ1066] gi|116628268|ref|YP_820887.1| amino acid ABC transporter periplasmic protein [Streptococcus thermophilus LMD-9] gi|55739468|gb|AAV63109.1| amino acid (glutamine) ABC transporter substrate binding protein [Streptococcus thermophilus CNRZ1066] gi|116101545|gb|ABJ66691.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus thermophilus LMD-9] gi|312278892|gb|ADQ63549.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus thermophilus ND03] Length = 284 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 101/251 (40%), Gaps = 20/251 (7%) Query: 2 YKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 K F + L ++ T+ + A + +IKK G L+ + F V Sbjct: 5 KKIFALLALVFALVAVTACSSNSSSGKSTAKARTIEEIKKSGELRIAVFADKKPFGYVDN 64 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G ++G+D++ L+ + P +Y+ ++A R L S ++DI N T R+ Sbjct: 65 KGAYQGYDIELGNRLAKDLGVKP---KYVSVDAANRAEFLISNKVDITLANFTVTDERKK 121 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F G + K K I V +L G ++ V GTT E F+ + Sbjct: 122 --QVDFALPYMKVSIGVVSPKDKVIKDVKELEGKTLIVTKGTTAETY----FEKNYPNIK 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +++ + A R DA++ D + + A + V + + +APA+ + Sbjct: 176 LQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGYEVGITSLGDPDTIAPAVQK 233 Query: 233 GDTEWYNIVSW 243 G+ E + ++ Sbjct: 234 GNKELLDFINK 244 >gi|58198299|gb|AAW65857.1| putative lipoprotein P30Hm13 [Helicobacter muridarum] Length = 268 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 99/256 (38%), Gaps = 14/256 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNAS------ILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 K F +++ +I + + S + + + IKKRG L G+ FA + Sbjct: 9 KLFIGALIAIIGMLAIACSESGNNKKANNQIEAIKKRGVLIVGVKKDAPNFALMNHKTQQ 68 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GF++D + L+ + D +KI+ P+ AK R L + +DI+ T R+ + Sbjct: 69 IEGFEIDMAKMLAKQMLGDENKIKLEPVTAKTRGPLLDNGTLDIVIATFTITDERKKT-- 126 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y D GF++ K+ S L I V TT + + + Sbjct: 127 YNFTESYYSDPIGFLVLKENNFKSFKDLDDKVIGVAQAATTNKVVTEAAADLGITVKIKE 186 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F + +A + R DA++ D S L + + IL D + A + D Sbjct: 187 FPDYPSLKSALDSKRIDAFSVDKSILRGYL-----DANNEILDDNLKAQEYGMATRKEDI 241 Query: 236 EWYNIVSWTHYAMVTA 251 +W N V+ Sbjct: 242 DWSNYVNNFVKDNKQT 257 >gi|317064770|ref|ZP_07929255.1| extracellular amino acid-binding protein [Fusobacterium ulcerans ATCC 49185] gi|313690446|gb|EFS27281.1| extracellular amino acid-binding protein [Fusobacterium ulcerans ATCC 49185] Length = 287 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 90/248 (36%), Gaps = 10/248 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++ +I+ + F+ + S L +KK G+ G++ N + GFD Sbjct: 32 MKKLFMAVLVIMILASVSLFAADGS-LEKVKKDGYFTVGLDATFAPMGFRDENEEIVGFD 90 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + + ++ P L+SK ID++ T R F Sbjct: 91 IDLAKEVAKRMGVEA---KFKPCEWDGIIFDLRSKNIDMVWNGMTITEQRSKQAA--FTT 145 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 DGQ K I+ VS+L G + VQ G++ + A +K + Sbjct: 146 PYLVDGQIIFSRKGNEINKVSELEGKVVGVQLGSSGSQAVERNAIAPKLK-EIKKYATNV 204 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A R DA D + + + +S A A+ + D + Sbjct: 205 EALLDLEAGRTDAVVMDAISGKYYNAKK---NTLSFSEESLSDEYFAVALRKDDKALLDE 261 Query: 241 VSWTHYAM 248 ++ M Sbjct: 262 INRLLDEM 269 >gi|326204706|ref|ZP_08194561.1| extracellular solute-binding protein family 3 [Clostridium papyrosolvens DSM 2782] gi|325985077|gb|EGD45918.1| extracellular solute-binding protein family 3 [Clostridium papyrosolvens DSM 2782] Length = 294 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 81/278 (29%), Gaps = 37/278 (13%) Query: 1 MYK----DFFVSILCLIILFFTS--------------------------FSTNASILGDI 30 M K S + L L ST + Sbjct: 1 MKKGKLIKVLASAMALTFLIAGCGTPGDSSSSSSTASESKVAENTAVSNTSTGEKSWDKV 60 Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K +G L G++ N + G+D+D + +++ + ++ P+N + Sbjct: 61 KDKGELVLGLDENFPPMGFRDGNNNIVGYDIDLAKEVAARLGVK---LKIQPINWDSKDQ 117 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 L + ID + R+ + F + Q ++ +++ L G S+ + Sbjct: 118 ELNTGNIDCIWNGFSINEERKA--NILFSDPYMKNNQVVVVAADSKFKTLADLKGKSVSL 175 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 QA ++ + + + + D D + A Sbjct: 176 QAQSSAADAIDKNTDFKKSLKDVVELKDNTLCLMDLKTGNTDGVVMDE--IVARYQIKMN 233 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 ++ IL + ++ + D + V+ T M Sbjct: 234 SEKYRILDESLAAEEYGVGFRKADVQLMTKVNDTLKTM 271 >gi|323698009|ref|ZP_08109921.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. ND132] gi|323457941|gb|EGB13806.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans ND132] Length = 253 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 86/252 (34%), Gaps = 18/252 (7%) Query: 1 MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + + + + F +F+ + L IK +G + G + F + G+ Sbjct: 1 MKFNKMRMLLMLAAIISLCAFATFAQAGTTLDKIKAKGVITVGNSPDYPPFESIGDGGER 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD A+++ + +Q++ ++ A QS Q+D+ T R + Sbjct: 61 VGFDVDLLNAIAAKMGVK---VQWVTMDFAAIVTATQSGQVDMGMSGFSVTPERAG--QV 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 +F + GQ ++ I S + L G I VQ GTT E A + Sbjct: 116 SFSAPYFASGQALVVRNDSDIKSAADLKGKKIAVQLGTTGEQEADKIEGA-----EVVKP 170 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E DA DIS + ++ A +G+ Sbjct: 171 ESYNIAFMMLGNKVADAVVADISVADEFVKQGK----FKRAGEPLTFEEFAMITRKGNDA 226 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 227 LLQALNQGLEAV 238 >gi|113866501|ref|YP_724990.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113525277|emb|CAJ91622.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia eutropha H16] Length = 299 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 94/252 (37%), Gaps = 8/252 (3%) Query: 4 DFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 ++ ++ T+ + L IK G + G+ + F G+ Sbjct: 5 KLAALMIAGGVMCGTAQAAEQLTGTLKKIKDTGVITLGVRESSIPFNYNLGGVRQVGYSY 64 Query: 62 DF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D A+ + +++ +P+ ++ R LQ+ IDI +T L R+ +G Sbjct: 65 DINMKIVEAIKDQLKLPNLQVKEIPITSQNRITLLQNGTIDIECGSTTNNLERQKQVG-- 122 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + G ++ K GI + L G ++ AGTT+E L + + I + Sbjct: 123 FTNSIFIIGTRIMVKKDAGIKDWADLKGKNVVTTAGTTSERLLRKMNDDQKLGVNIISTK 182 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R A+ D + LY + P++ +++ S+ I + D ++ Sbjct: 183 DHGQSFLTLESGRAVAFMMDDALLYGERAKAKNPADWIVVGKPQSRESYGCMIRKDDPQF 242 Query: 238 YNIVSWTHYAMV 249 + M+ Sbjct: 243 KKLSDTVISGMM 254 >gi|312863687|ref|ZP_07723925.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus vestibularis F0396] gi|322516243|ref|ZP_08069175.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] gi|311101223|gb|EFQ59428.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus vestibularis F0396] gi|322125307|gb|EFX96672.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] Length = 284 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 101/251 (40%), Gaps = 20/251 (7%) Query: 2 YKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 K F + L ++ T+ + A + +IKK G L+ + F V Sbjct: 5 KKIFALLALVFALVAVTACSSNSSSGKSTAKARTIEEIKKSGELRIAVFADKKPFGYVDN 64 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G ++G+D++ L+ + P +Y+ ++A R L S ++DI N T R+ Sbjct: 65 KGAYQGYDIELGNRLAKDLGVKP---KYVSVDAANRAEFLISNKVDITLANFTVTDERKK 121 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F G + K K I V +L G ++ V GTT E F+ + Sbjct: 122 --QVDFALPYMKVSIGVVSPKDKVIKDVKELEGKTLIVTKGTTAETY----FEKNYPNIK 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +++ + A R DA++ D + + A + V + + +APA+ + Sbjct: 176 LQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGYEVGITSLGDPDTIAPAVQK 233 Query: 233 GDTEWYNIVSW 243 G+ E + ++ Sbjct: 234 GNKELLDFINK 244 >gi|257887550|ref|ZP_05667203.1| extracellular solute-binding protein [Enterococcus faecium 1,141,733] gi|257898672|ref|ZP_05678325.1| extracellular solute-binding protein [Enterococcus faecium Com15] gi|257823604|gb|EEV50536.1| extracellular solute-binding protein [Enterococcus faecium 1,141,733] gi|257836584|gb|EEV61658.1| extracellular solute-binding protein [Enterococcus faecium Com15] Length = 271 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 98/250 (39%), Gaps = 15/250 (6%) Query: 2 YKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDW 56 K + +L + L N IL K + G+ F + + Sbjct: 5 KKIRLIFLLGIAFLALAGCKGNGLANEDILERSKSTNEIIWGVKYDTRLFGMMDIESRTV 64 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDVD +A++ I + K +++ + +K R L++ ID + T R+ + Sbjct: 65 QGFDVDIAKAITEKILGENGKAEFVEVTSKTRIPLLKNGNIDAIIATMTITDERKK--QV 122 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASIC-VQAGTTTELTLADYFKAHNMKYHPIV 175 F + + GQ ++ K I SV L+ ++ G+T+ + + N + Sbjct: 123 DFSDVYFDAGQALLVKKGSQIKSVDDLNASTTVLAVKGSTSAANIRQHAPDAN----ILE 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E E A ++ + DA T D + L + ++ P E+ ++ + P AI +G Sbjct: 179 LENYAEAFTALQSGQGDAMTTDNAILLGIA--DENP-EYELVGGTFTNEPYGIAINKGQE 235 Query: 236 EWYNIVSWTH 245 + V+ Sbjct: 236 NFLKAVNQAL 245 >gi|222152719|ref|YP_002561895.1| glutamine-binding protein [Streptococcus uberis 0140J] gi|222113531|emb|CAR41318.1| putative glutamine-binding protein precursor [Streptococcus uberis 0140J] Length = 271 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 111/276 (40%), Gaps = 18/276 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKAN- 53 K F ++ L+ L F ++ + IKK G L+ G+ + F A+ Sbjct: 5 KKWTFFCLMTLLTLIFMPKASADDNQLLKTKSIQTIKKAGVLRVGVKQDVPNFGYYSADT 64 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G ++G +VD R ++ + P + + A+ R L + Q+DI+ T E Sbjct: 65 GKYEGMEVDLARKIAKKLKVKP---VFTAVTAQTREALLDNGQLDIIIATYTITP--ERQ 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +F Y D GF++++ + I S+ L+ +I V G+TT+ + +Y KAH++ + Sbjct: 120 ANYSFSIPYYRDEVGFLVNQSEKIDSIKDLNHRTIGVAQGSTTKAAIEEYGKAHHLDFKF 179 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + E+ + + R A++ D S L ILPD ++ A + Sbjct: 180 VQLGSYPELAISLYSKRIQAFSVDKSILSGYVSKQT-----AILPDGFNQQSYGIASSKA 234 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 +++ ++ L KN + Sbjct: 235 NSQLTKYINQLIEEWTNDGSLQAIYKNYGLKPAKSE 270 >gi|15902578|ref|NP_358128.1| amino acid ABC transporter amino acid-binding protein [Streptococcus pneumoniae R6] gi|116516520|ref|YP_816032.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae D39] gi|15458109|gb|AAK99338.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor precursor [Streptococcus pneumoniae R6] gi|116077096|gb|ABJ54816.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae D39] Length = 264 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 102/251 (40%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSF-STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 M K FF+S L + + + A + DI+KRG L G+ + F G + Sbjct: 1 MKKKFFLSALLISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G + D + ++ + KI+Y+P+ A+ R L ++Q+D+ T R+ Sbjct: 61 GIETDLAKMVADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YN 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y D GF+++K I + L+G +I V G+ T+ + + K +K+ + Sbjct: 116 FTSPYYTDASGFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + AHR D ++ D S L +L D S + +TE Sbjct: 176 SYPELITSLHAHRIDTFSVDRSILSGYTSKRT-----ALLDDSFKPSDYGIVTKKSNTEL 230 Query: 238 YNIVSWTHYAM 248 + + Sbjct: 231 NDYLDNLVTKW 241 >gi|85704883|ref|ZP_01035984.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. 217] gi|85670701|gb|EAQ25561.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. 217] Length = 291 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 100/258 (38%), Gaps = 7/258 (2%) Query: 3 KDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + L + L I G + G V F+ + +G+ Sbjct: 7 RRMLAIAALTTGLAPAALWGQDLTGTLAKINDSGEIVLGHRESSVPFSYLNDQQQPEGYS 66 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 +D C + + +++Y+P+N K R + + ID+ +T L R + Sbjct: 67 IDLCMKVVEEVEKTLGKDIEVRYVPVNPKTRIALMANGTIDLECGSTTNNLTR--QQQVE 124 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + P+T+ G + K+ GI+SV+ L G SI + GTT E + +A + + Sbjct: 125 YLPVTFVTGTKILTRKESGITSVADLDGKSIALAQGTTNERAIKAVVEAQGLDVKILPVR 184 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R DAY+ D L+ L + P E ++ D +S P A + + D+ + Sbjct: 185 DHAEGMLSLETDRVDAYSTDHILLHGLIAKSKTPDEFAVVGDFLSFDPYALMVRRDDSAF 244 Query: 238 YNIVSWTHYAMVTAEELG 255 + + + E+ Sbjct: 245 ELVGKTALANVFRSGEIN 262 >gi|228477047|ref|ZP_04061685.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] gi|228251066|gb|EEK10237.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] Length = 284 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 102/251 (40%), Gaps = 20/251 (7%) Query: 2 YKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 K F + L ++ T+ + A + +IKK G L+ + F V Sbjct: 5 KKIFALLALVFALVAVTACSSNSSSGKSTAKARTIEEIKKSGELRIAVFADKKPFGYVDN 64 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G ++G+D++ L+ + P +Y+ ++A R L S ++DI N T R+ Sbjct: 65 KGAYQGYDIELGNRLAKDLGVKP---KYVSVDAANRAEFLISNKVDITLANFTVTDERKK 121 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F G + K K I V +L G ++ V GTT E F+ + Sbjct: 122 --QVDFALPYMKVSIGVVSPKDKVIKDVKELEGKTLIVTKGTTAETY----FEKNYPNIK 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +++ + A R DA++ D + + A + V + + + +APA+ + Sbjct: 176 LQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGYEVGITSLGNPDTIAPAVQK 233 Query: 233 GDTEWYNIVSW 243 G+ E + ++ Sbjct: 234 GNKELLDFINK 244 >gi|332111811|gb|EGJ11791.1| extracellular solute-binding protein [Rubrivivax benzoatilyticus JA2] Length = 295 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 50/240 (20%), Positives = 106/240 (44%), Gaps = 7/240 (2%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDP 75 + A L IK+ G + G+ G + +G + G+ +D C+ + + Sbjct: 15 GAVQADTLSKIKETGTVTMGVRESS-GLSYTLGDGKFVGYHIDVCQKVLSDIRKKLGLSS 73 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 I+Y P+ ++ R +Q+ +DI +T + R+ + F T+ + + Sbjct: 74 LTIKYQPVTSQNRIPLVQNGTVDIECGSTTNNVARQKDVA--FAVTTFVEEVRIAVKADS 131 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 GI+S++QL G ++ GTT+ TL + +A+ + + + + + + R DA+ Sbjct: 132 GINSIAQLVGKTVATTTGTTSVQTLRKHERANGVDFKEVYGKDHADSFLLLESGRADAFV 191 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D S L T+ P+ I+ +++S P+A + + D + V + A + + +L Sbjct: 192 MDGSILAKNIATSKNPAGFKIVGEVLSVEPIAIMLRKDDAAFKAAVDESIKAQIKSGDLA 251 >gi|238791651|ref|ZP_04635289.1| Glutamate/aspartate periplasmic-binding protein [Yersinia intermedia ATCC 29909] gi|238729267|gb|EEQ20783.1| Glutamate/aspartate periplasmic-binding protein [Yersinia intermedia ATCC 29909] Length = 309 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 80/225 (35%), Gaps = 6/225 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD----FCRALSSAIFDDPSKIQY 80 L IK G + G V F+ G+ D A+ + +++ Sbjct: 38 DTLKKIKDSGVIVVGHRESSVPFSYYDNQQKVVGYAQDYSNLIIDAVKKKLNAPDLQVKL 97 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D +T L R AF + G + K + Sbjct: 98 IPITSQNRIPLLQNGTFDFECGSTTNNLER--QQQAAFSNTIFVVGTRLLTKKGSDVKDF 155 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G ++ V +GTT+E+ L + M I + + + R A+ D + Sbjct: 156 KDLAGKAVVVTSGTTSEVLLNKLNEKDKMDMRIISAKDHGDSFRTLESGRAVAFMMDDAL 215 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L + +P + I+ S+ + + D + ++ T Sbjct: 216 LAGERAKAKKPDQWDIVGKPQSQEAYGCMLRKNDPAFKALLDETI 260 >gi|330957762|gb|EGH58022.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 304 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 84/241 (34%), Gaps = 7/241 (2%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDF----CRALSSAIFDD 74 + L IK+ G + G + F+ + A+G G+ D A+ + Sbjct: 23 AAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHDIQLKIVEAIKKDLGMP 82 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K++Y + ++ R +Q+ +D+ +T + R + F + G + K Sbjct: 83 ELKVKYNLVTSQTRIPLVQNGTVDLECGSTTNNVER--QQQVDFSIGIFEVGTRLLSKKX 140 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 L G ++ AGTT+E L M + I + E + R A+ Sbjct: 141 SSYKDFDDLKGKNVVTTAGTTSERILKSMNADKQMGMNVISAKDHGESFQMLESGRAVAF 200 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L K +P + + S + +GD + V A + ++ Sbjct: 201 MMDDALLAGEKAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGDI 260 Query: 255 G 255 Sbjct: 261 N 261 >gi|322373492|ref|ZP_08048028.1| CjaA protein [Streptococcus sp. C150] gi|321278534|gb|EFX55603.1| CjaA protein [Streptococcus sp. C150] Length = 284 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 103/251 (41%), Gaps = 20/251 (7%) Query: 2 YKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 K F + L ++ T+ + A + +IKK G L+ + F V + Sbjct: 5 KKIFALLALVFALVAVTACSSNSSSGKSTAKARTIAEIKKSGELRIAVFADKKPFGYVDS 64 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G ++G+D++ L+ + P +Y+ ++A R L S ++DI N T R+ Sbjct: 65 KGAYQGYDIELGNRLAKDLGVKP---KYVSVDAANRAEFLISNKVDITLANFTVTDERKK 121 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F G + K K I V +L G ++ V GTT E F+ + Sbjct: 122 --QVDFALPYMKVSIGVVSPKDKVIKDVKELEGKTLIVTKGTTAETY----FEKNYPNIK 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +++ + A R DA++ D + + A + V + + + +APA+ + Sbjct: 176 LQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGYEVGITSLGAPDTIAPAVQK 233 Query: 233 GDTEWYNIVSW 243 G+ E + ++ Sbjct: 234 GNKELLDFINK 244 >gi|315452691|ref|YP_004072961.1| amino-acid(glutamine) ABC transporter, periplasmic glutamine-binding protein [Helicobacter felis ATCC 49179] gi|315131743|emb|CBY82371.1| amino-acid(Glutamine) ABC transporter, periplasmic glutamine-binding protein [Helicobacter felis ATCC 49179] Length = 276 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 101/245 (41%), Gaps = 14/245 (5%) Query: 4 DFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 L ++ L + S L IK+RG LK G+ + F + + G+++G Sbjct: 6 RVLGIFLVVLGLGLAGCGDHKNQSKESGLASIKQRGVLKVGVFSDKPPFGYMDSKGEYQG 65 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV + ++ + D KI+++P+ A R L+S ++DI+ N T RE + F Sbjct: 66 FDVYIAKRMAKDLLGDEKKIEFIPVEAAARVEFLKSNKVDIIMANFTKTKEREAV--VDF 123 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G K + S+ L + V GTT + F + + +++ Sbjct: 124 AKPYMKVALGVAS-KNGEVKSIEDLKDKPLIVNKGTTADFY----FSKNYPNISLLKYDQ 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E A + +R A D + L+A P V +P + + +APA+ +G+ Sbjct: 179 NTETFLALKDNRGPALAHDNTLLFAW--VKKNPEFKVGIPSLGDQDVIAPAVKKGNKALL 236 Query: 239 NIVSW 243 ++ Sbjct: 237 EWLNK 241 >gi|330811359|ref|YP_004355821.1| Putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379467|gb|AEA70817.1| Putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 304 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 83/241 (34%), Gaps = 7/241 (2%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDD---- 74 + L IK+ G + G + F+ + A+G G+ D + A+ D Sbjct: 23 AAELTGTLKKIKESGVVTLGHRDASIPFSYIADASGKPVGYSHDIQMKVVEALKKDLDLP 82 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +++Y + ++ R +Q+ +D+ +T + R + F + G + K Sbjct: 83 NLQVKYNLVTSQTRIPLVQNGTVDLECGSTTNNVER--QQQVDFSVGIFEIGTKLLSKKD 140 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 L G ++ AGTT+E L M + I + E + R A+ Sbjct: 141 SKYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAF 200 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L + + + S + +GD + V A + E+ Sbjct: 201 MMDDALLAGEAAKAKKADDWAVTGTPQSYEIYGCMMRKGDEPFKKAVDDAIKATYASGEI 260 Query: 255 G 255 Sbjct: 261 N 261 >gi|227551336|ref|ZP_03981385.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecium TX1330] gi|257896044|ref|ZP_05675697.1| extracellular solute-binding protein [Enterococcus faecium Com12] gi|293378784|ref|ZP_06624941.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium PC4.1] gi|227179547|gb|EEI60519.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecium TX1330] gi|257832609|gb|EEV59030.1| extracellular solute-binding protein [Enterococcus faecium Com12] gi|292642577|gb|EFF60730.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium PC4.1] Length = 271 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 98/250 (39%), Gaps = 15/250 (6%) Query: 2 YKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDW 56 K + +L + L N IL K + G+ F + + Sbjct: 5 KKIRLIFLLGIAFLALAGCKGNGLANEDILERSKSTNEIIWGVKYDTRLFGMMDIESRTV 64 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDVD +A++ I + K +++ + +K R L++ ID + T R+ + Sbjct: 65 QGFDVDIAKAITEKILGENGKAEFVEVTSKTRIPLLKNGNIDAIIATMTITDERKK--QV 122 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASIC-VQAGTTTELTLADYFKAHNMKYHPIV 175 F + + GQ ++ K I SV L+ ++ G+T+ + + N + Sbjct: 123 DFSDVYFDAGQALLVKKGSRIKSVDDLNASTTVLAVKGSTSAANIRQHAPDAN----ILE 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E E A ++ + DA T D + L + ++ P E+ ++ + P AI +G Sbjct: 179 LENYAEAFTALQSGQGDAMTTDNAILLGIA--DENP-EYELVGGTFTNEPYGIAINKGQE 235 Query: 236 EWYNIVSWTH 245 + V+ Sbjct: 236 NFLKAVNQAL 245 >gi|16329306|ref|NP_440034.1| hypothetical protein sll0224 [Synechocystis sp. PCC 6803] gi|1651787|dbj|BAA16714.1| sll0224 [Synechocystis sp. PCC 6803] Length = 298 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 56/249 (22%), Positives = 103/249 (41%), Gaps = 10/249 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L+ + S +L I++ G + G V FA V G+W GF Sbjct: 1 MKKFACLALSVLLSGAASLPSWAGEVLDRIEQTGVINAGTRKDAVPFAYVDDQGEWVGFS 60 Query: 61 VDFCRAL---SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 +D + + A P K+ + A RF + ++ ID+ ++ +T R + Sbjct: 61 IDLLELIRQEAEARLGKPIKLNMVEATADNRFDLITNQTIDLECASSTFTWNRTAV--VD 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + DG I + S L+G +I V TT + D+ + + Sbjct: 119 FSVSYFADGTKIITGVDSDLESADSLAGRAIGVIPDTTNAKAILDF----QPGATIVEVK 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTE 236 + A A +A+ GD L LK T+D P + ++P+ A + + D++ Sbjct: 175 DQADGMAKLEAGEIEAFAGDGIVLAGLKKTSDNPQQWKVVPNFPYQYEAYACLLPKDDSD 234 Query: 237 WYNIVSWTH 245 W N+V+++ Sbjct: 235 WRNLVNYSL 243 >gi|271502694|ref|YP_003335720.1| family 3 extracellular solute-binding protein [Dickeya dadantii Ech586] gi|270346249|gb|ACZ79014.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech586] Length = 278 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 63/328 (19%), Positives = 111/328 (33%), Gaps = 66/328 (20%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K L ++ + + A L DI+K G +K + F V + G+ Sbjct: 1 MKKPLLAFSLLAGLVSL-AGNAQADKLDDIQKAGVVKVAVFDSNPPFGYVDPQSKKLVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD +A+ +A+ ++ N R L SK++D+++ N T R + F Sbjct: 60 DVDVAQAIGNALGVK---VELRATNPANRIPLLTSKKVDLIAANFTITDERAK--QVNFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + L I GT E+TL +++ I ++ Sbjct: 115 VPYFATGQKFIARKG-VLKTPDDLKNLRIGADKGTVQEITLREHYPTAK----VISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTN--DRPSEHVILPDIISKSPLAPAIIQGDTEW 237 AA R A T D + L L + ++ I P I+K + +G+ Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLGNLAPAQKADFEISPFSITKEYQGIGLPKGEDRL 229 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 V+ L ++K + Sbjct: 230 TQKVNDI-------------------------------LLNLEKQGD------------- 245 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRG 325 ++ +++R G Q+ PRG Sbjct: 246 -AVK-------IYNRWFGPQTPSAQPRG 265 >gi|257869447|ref|ZP_05649100.1| extracellular solute-binding protein [Enterococcus gallinarum EG2] gi|257803611|gb|EEV32433.1| extracellular solute-binding protein [Enterococcus gallinarum EG2] Length = 269 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 95/255 (37%), Gaps = 16/255 (6%) Query: 1 MYKDFFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANG 54 M K +L + L S + +L K+ + G+ F + A Sbjct: 1 MSKKISTVLLLVFALMTFSACKGQSAAERDVLASSKESNQIIWGVKNDTRLFGLMDIATA 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + +GFD+D +A++ I ++ + +K R L++ ID + T R+ Sbjct: 61 EVRGFDIDIAKAITEHILGRDGSAIFVEVTSKTRIPLLKNGNIDAIIATMTITDERKK-- 118 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + + GQ ++ K I + L+ ++ V G+T+ + + Sbjct: 119 QVDFSDVYFDAGQSLLVAKDSPIQGIEDLNANTTVLVVKGSTSAINIRKAAPEAK----I 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + E E A ++ + DA T D + L + N + ++ + P AI +G Sbjct: 175 LELENYAEAFTALQSGQGDAMTTDNAILLGMASENPN---YHLVGGTFTNEPYGIAIDKG 231 Query: 234 DTEWYNIVSWTHYAM 248 + V+ M Sbjct: 232 QEPFLKAVNQALKEM 246 >gi|325526439|gb|EGD04023.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. TJI49] Length = 301 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 89/236 (37%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI----FDDPSKIQ 79 + L I++ + G V F+ V A+G GF D C + +A+ +++ Sbjct: 29 SGTLEKIRQNNLISIGHRETSVPFSYVDASGKVIGFSQDLCDRVIAAVKARTGKPDLQVR 88 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++P+ ++ R +Q+ +D+ T R + F + + + GI Sbjct: 89 FIPVTSQNRIPLVQNGTVDLECGVTTNLAARHAQVA--FSTTFFVATTRLLTRTQSGIRD 146 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G ++ GTT+E L + M I + E + R AY D Sbjct: 147 FPDLAGKTVVTNQGTTSERLLRKMNEDKKMNMQIISAKDYGEGRLTLESGRAAAYMMDDV 206 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L ++ +P++ I+ S + + D ++ +V ++ E+ Sbjct: 207 LLAGVRQLAAKPADWQIVGTPQSSEAYGFMLRKDDPQFKALVDGVLVQLMKRGEID 262 >gi|224825939|ref|ZP_03699043.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] gi|224602163|gb|EEG08342.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] Length = 297 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 92/259 (35%), Gaps = 7/259 (2%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + L L T + AS L + + V F+ + + GF Sbjct: 1 MKTKKLMTTALIATGLACTLPAVAASTLEKVAASNKITVSYREAAVPFSYLPGSDKAVGF 60 Query: 60 DVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 VD A+ + ++ +P+ ++ R L D+ +T R + Sbjct: 61 SVDLTNAIVDDVRKKLKKPNLEVAAIPVTSQNRIPLLVDGTYDLECGSTTNNAARGKDVA 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F ++ G + K I+S + L+ ++ AG+T E + Y +++ ++ Sbjct: 121 --FAISHFYAGTRLLAKKTAHITSYADLAKKTVASTAGSTNEKVIRQYSADNHLDMQFVL 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + A D L+ LK P ++ D + P + + D Sbjct: 179 GKDYGDALQLVENDQAVALALDDILLFGLKANAKNPDSLEVVGDALQVEPYGCMLRKDDP 238 Query: 236 EWYNIVSWTHYAMVTAEEL 254 E+ +V T ++ + E Sbjct: 239 EFKALVDGTLARLMKSGEF 257 >gi|325121936|gb|ADY81459.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) [Acinetobacter calcoaceticus PHEA-2] Length = 297 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 93/253 (36%), Gaps = 10/253 (3%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + +S + L + TS A L IK G + G + V A G Sbjct: 1 MKRSATSLIISTVMLCTVGATSQIQAADTLAKIKSTGKIVIGHRESSDPISYVVA-GKPV 59 Query: 58 GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ VD C + + K++Y + + R L + ID+ T + R+ Sbjct: 60 GYAVDICNQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQQQ 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +G F Y + GI S++ L+G ++ GTT++ + K + Sbjct: 120 VG--FSTNYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQAVNVQN 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + A + R A+ D + L L + P I+ ++S P + + Sbjct: 178 IYGKDHADSFAMMASGRAAAFVMDDNILAGLIAKSSTPKAFAIVGPVLSSEPYGIMLAKD 237 Query: 234 DTEWYNIVSWTHY 246 D ++ I T Sbjct: 238 DPKFKAIADRTVN 250 >gi|329122022|ref|ZP_08250631.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Dialister micraerophilus DSM 19965] gi|327467074|gb|EGF12586.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Dialister micraerophilus DSM 19965] Length = 265 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 91/238 (38%), Gaps = 7/238 (2%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 ++++ +K + G++ NG+ GFDVD +A+S I + Sbjct: 20 LVAGCGSDSAKNDSTQKPKKIIAGLDDTFAPMGFRDENGNIVGFDVDIAKAVSKEIGVE- 78 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 I++ P++ + L S +ID + T RE + F + Q +++ Sbjct: 79 --IEFKPIDWASKESELNSGRIDCIWNGLSITPEREE--KMDFTNPYMNNDQIYVVMDNS 134 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S S L G IC Q G+T +L L + + A+R DA Sbjct: 135 DIKSASDLKGKRICFQEGSTVDLALNKNMDLRHSFGEIKTYPDFTSCFLDLDANRADAVL 194 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 D A P ++ LP+ +S P A + +G+ E +++ + + E Sbjct: 195 VDGIL--ADYYMTKSPGKYRRLPEKLSTEPFAIGVKKGNEEIVKMLNEGIEKVKASGE 250 >gi|318604771|emb|CBY26269.1| glutamate Aspartate periplasmic binding protein precursor GltI [Yersinia enterocolitica subsp. palearctica Y11] Length = 304 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 94/251 (37%), Gaps = 9/251 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSK 77 + L IK G + G V F+ G+ D+ + AI + Sbjct: 30 ASVDTLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIKKKLNAPDLQ 89 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ +P+ ++ R LQ+ D +T L R AF + G + K + Sbjct: 90 VKLIPITSQNRIPLLQNGTFDFECGSTTNNLER--QQQAAFSNTIFVVGTRLLTKKGSEV 147 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +L+G + V +GTT+E+ L + M I + + + R A+ D Sbjct: 148 KDFKELAGKPVVVTSGTTSEVLLNKLNEKDKMNMRIISAKDHGDSFRTLESGRAVAFMMD 207 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + L + +P + I+ S+ + + D + ++ T TA+ G+ Sbjct: 208 DALLAGERAKAKKPDQWDIVGTPQSQEAYGCMLRKDDPAFKTLLDETI---ATAQTSGVA 264 Query: 258 QKNINQVSKDT 268 +K+ ++ K+ Sbjct: 265 EKSFDRWFKNP 275 >gi|312621847|ref|YP_004023460.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor kronotskyensis 2002] gi|312202314|gb|ADQ45641.1| extracellular solute-binding protein family 3 [Caldicellulosiruptor kronotskyensis 2002] Length = 266 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 49/234 (20%), Positives = 86/234 (36%), Gaps = 9/234 (3%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 + S N + L IKK G++ N + GFDVD ++ + Sbjct: 18 FLSGCASNDQNMTTLEKIKKTKEFVVGMDNTFPPMEFTDDNNNTVGFDVDLANEIAKKLG 77 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +K++ + ++ AL+SK+ D + T R+ + L + Q + Sbjct: 78 ---AKLKIVAVDWSGIQSALKSKKFDAIISCFSITDERKKAFNL--AGPYLYIRQVIAVK 132 Query: 133 K-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 K I + L G I VQA TT + + K N + +ER+ + R Sbjct: 133 KGDSSIKNFEDLKGIKIGVQANTTGDNAVQKM-KFINYEKDVTRYERITDAFNDLDIGRI 191 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A D + A P + I P + + P+ A+ + D + YN + Sbjct: 192 KAVVIDS--VVAYYYKKQNPEKFDIAPAQLEREPVGIALRKEDKDLYNEIQKIL 243 >gi|307152951|ref|YP_003888335.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] gi|306983179|gb|ADN15060.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] Length = 298 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 52/250 (20%), Positives = 99/250 (39%), Gaps = 11/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 MYK ++ + L++ + + A +L I++ G + G + F V G W G+ Sbjct: 1 MYKQLAITAITLLLTITSQTPSLAGRVLDKIRQTGVITAGARKDAIPFGYVNEKGQWVGY 60 Query: 60 DVD---FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D R + P K+Q + + + RF ++ + IDI +T T R+ + Sbjct: 61 SLDILELIRQQTEKQLGKPIKLQLVEVTPENRFAKIKDQSIDIECGSTTVTWARDK--EV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G ++ K + ++ L+G I V TT E + A + Sbjct: 119 DFSVSYFASGTQLLVKKGSNLGTIESLAGMKIGVIPNTTNERAIKLQQPAA----QLVTV 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235 + E D + D L LK T + I+P+ A I Q ++ Sbjct: 175 KDRFEGLQKLEKGEIDGFASDGIVLQGLKRTVKNGNSLEIVPEYPYMYESYACVIPQDES 234 Query: 236 EWYNIVSWTH 245 +W ++V+++ Sbjct: 235 QWRDLVNYSL 244 >gi|220904827|ref|YP_002480139.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869126|gb|ACL49461.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 302 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 85/235 (36%), Gaps = 6/235 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQY 80 L IK+ G + G V F+ + G+ D+ + A+ K+++ Sbjct: 31 GTLKKIKETGVITVGHRESSVPFSYYDLQQNVIGYSQDYSNKIVDAVKKQLNMPNLKVRF 90 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D +T + + F + G + HK GI Sbjct: 91 VPITSQNRIPLLQNGTYDFECGSTTNNA--DRQQQVDFSNTLFIVGTRLLTHKDSGIKDF 148 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G ++ V AGTT+E+ L + I + + + R A+ D + Sbjct: 149 DDLKGKNVAVTAGTTSEMLLNKMNDEKKLGISIISTKDHGDSFRTVESGRAVAFFIDDAL 208 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + +P+E VI+ S + +GD + + + E Sbjct: 209 LAGERAKAKKPAEWVIVGTPQSFEAYGCMLRKGDAAFKKLADDAIAELQLNGEAE 263 >gi|209516854|ref|ZP_03265704.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209502670|gb|EEA02676.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 272 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 94/247 (38%), Gaps = 11/247 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDV 61 K FV + +L S +A L DIKK G L+ F V G DV Sbjct: 2 KIKFVGAAVMGLLLAFSGVAHADRLDDIKKAGVLRVATFDSNAPFGFVDPKTNQIVGLDV 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D+ RA+++ + ++ P N R L+S ++D++ N T R + F Sbjct: 62 DYARAVANKLGVK---LEIQPTNPANRIAFLKSGKVDLVFANFTITDERRK--EVDFSTP 116 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + G FI K + S QL+ + GTT E + F + ++ Sbjct: 117 YFASGTQFIAKKG-VLKSAQQLNNLRVGADKGTTNEQQVRAQFP----NATIVAYDDTPF 171 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AA RA A T D L AL + + I P IS + +G+T N+V Sbjct: 172 AFAALRAGNVQAITQDGPKLVALLANVPDKANYEIPPFTISNDYEGVGVPKGETRLLNVV 231 Query: 242 SWTHYAM 248 T + Sbjct: 232 DDTLKGL 238 >gi|238795397|ref|ZP_04638912.1| Glutamate/aspartate periplasmic-binding protein [Yersinia mollaretii ATCC 43969] gi|238720516|gb|EEQ12317.1| Glutamate/aspartate periplasmic-binding protein [Yersinia mollaretii ATCC 43969] Length = 309 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 93/248 (37%), Gaps = 9/248 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD----FCRALSSAIFDDPSKIQY 80 L IK G + G V F+ G+ D A+ + +++ Sbjct: 38 DTLKKIKDSGVIVVGHRESSVPFSYYDNQQKVVGYAQDYSDLIVDAVKKKLNAPDLQVKL 97 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D +T L R +F + G + K + Sbjct: 98 IPITSQNRIPLLQNGTFDFECGSTTNNLER--QQQASFSNTIFVVGTRLLTKKGSEVKDF 155 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G ++ V +GTT+E+ L + N+ I + + + R A+ D + Sbjct: 156 KDLAGKTVVVTSGTTSEVLLNKLNEKDNLNMRIISAKDHGDSFRTLESGRAVAFMMDDAL 215 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + +P + I+ S+ + + D + ++ T TA+ G+ +K+ Sbjct: 216 LAGERAKAKKPDQWDIVGTAQSQEAYGCMLRKNDPAFKALLDETI---ATAQTSGVAEKS 272 Query: 261 INQVSKDT 268 ++ K+ Sbjct: 273 FDRWFKNP 280 >gi|82880397|gb|ABB92744.1| glutamate sensor protein FLIPE-600n [synthetic construct] Length = 764 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 85/233 (36%), Gaps = 6/233 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLP 82 L I K G + G V F+ G+ D+ A+ A+ +++ +P Sbjct: 250 LDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIP 309 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T + R+ F + G + K I + Sbjct: 310 ITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKDFAN 367 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L ++ V +GTT+E+ L + M I + + + R A+ D + L Sbjct: 368 LKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLA 427 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 428 GERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 480 >gi|82880399|gb|ABB92745.1| surface displayed FLIPE 600n sensor protein [synthetic construct] Length = 865 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 85/233 (36%), Gaps = 6/233 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLP 82 L I K G + G V F+ G+ D+ A+ A+ +++ +P Sbjct: 289 LDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIP 348 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R LQ+ D +T + R+ F + G + K I + Sbjct: 349 ITSQNRIPLLQNGTFDFECGSTTNNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKDFAN 406 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L ++ V +GTT+E+ L + M I + + + R A+ D + L Sbjct: 407 LKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLA 466 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + +P I+ S+ + + D ++ ++ T + T+ E Sbjct: 467 GERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 519 >gi|330969980|gb|EGH70046.1| extracellular solute-binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 262 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 51/231 (22%), Positives = 98/231 (42%), Gaps = 8/231 (3%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + + S ++S L IK R L G+ + F V G + GFD D + + + D Sbjct: 1 MAKAAPSPSSSYLETIKARDKLIVGVFSDKPPFGFVNEQGQYVGFDTDLGKRFAKDLLGD 60 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K++++ + R LQS ++D++ N T R + F ++ + Sbjct: 61 EKKVEFVVVEPASRIPFLQSDKVDLILANMTVTPER--REAVDFTHPNLRVAVQALVPQA 118 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + ++ L+ + V GTT ++ L ++ + + FE+ E A R DAY Sbjct: 119 SPVKTLDDLASKTTIVTTGTTADIWLT----KNHPDWKVLKFEKNSESLQALANGRGDAY 174 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D L++ P V+ + ++P+APA+ +G+ E + V+ Sbjct: 175 AQDNLVLFSWA--KKNPGYRVLEQKLGDEAPIAPAVKKGNIELRDWVNTEL 223 >gi|329121399|ref|ZP_08250024.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Dialister micraerophilus DSM 19965] gi|327469689|gb|EGF15156.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Dialister micraerophilus DSM 19965] Length = 281 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 111/253 (43%), Gaps = 21/253 (8%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGINTGLVGFAEV 50 M K F ++I+ ++ L F S + S + +IKK G L G+ + F + Sbjct: 1 MKKFTTFLMAIVSILALTFASGCASNSETESKPYRSIAEIKKSGELIIGVFSDKAPFGYI 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 NG+++G+D+ F L+ + P +Y+ L R ++ ++DI+ N T R Sbjct: 61 DKNGNYRGYDIYFAERLAKDLGVKP---KYISLEPANRTEYAKTGKVDIILANFTVTKER 117 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + F G + K + I+SV QL G + V GTT E F ++ + Sbjct: 118 AE--QVDFALPYMKVAIGVVSPKNQNITSVEQLKGKKLIVAKGTTAETY----FTENHPE 171 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + F++ E +A R DA++ D + + A + P V + + +APA+ Sbjct: 172 IELLKFDQYAETYSALLDKRGDAFSTDNTEVLAWAM--KNPEYKVGITHLGKDEVIAPAV 229 Query: 231 IQGDTEWYNIVSW 243 +G+ E + ++ Sbjct: 230 QKGNKELLDYINN 242 >gi|227888779|ref|ZP_04006584.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] gi|227850616|gb|EEJ60702.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] Length = 263 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 89/260 (34%), Gaps = 10/260 (3%) Query: 1 MYKDFF----VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K + I+ L + + IK RG L G++ V + NG Sbjct: 1 MMKKIIRFLSLLIIVLASVGVAGCQGQENSWQAIKSRGTLVIGVDDSFVPMDFRQKNGKL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD +A+ I P + ++ + L++ I+++ T R + Sbjct: 61 VGFDVDLAKAVCKEIGLKPD---FQTIDWSMKETELRNGTINVIWNGYTKTKARAK--KV 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-PIV 175 AF + Q + K +GI++ Q+ + VQ G++ L +Y K + ++ Sbjct: 116 AFSKPYLENDQILVTRKNEGINNYRQMRWKILGVQTGSSGADDLDNYPKVLKKRVKSTVL 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ +A R D D + E + I + D Sbjct: 176 YDTYNNAFIDLKAGRIDGLLIDGVYANYYLAHSKYQKEFKKEKLPYPSEKFSVGINKKDK 235 Query: 236 EWYNIVSWTHYAMVTAEELG 255 N ++ + EL Sbjct: 236 TLKNKINQALDHLEKTGELK 255 >gi|261823780|ref|YP_003261886.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] gi|261607793|gb|ACX90279.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] Length = 278 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 91/248 (36%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K L L L S + A L DI+K G +K + F V + G+ Sbjct: 1 MKKQILTVAL-LAGLASVSGAAQADKLDDIQKAGVVKIAVFDSNPPFGYVDPQSKKLVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A+ A+ ++ N R L S+++D+++ N T R + F Sbjct: 60 DVDIAEAIGKALGVK---VELRATNPANRIPLLSSQKVDLIAANFTITDERAK--QVNFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + + I GT E+TL +++ I ++ Sbjct: 115 LPYFATGQKFIARKG-VLKTPDDIKTLRIGADKGTVQEITLREHYPTAK----VISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237 AA R A T D + L L E I P I+K I +G+ Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLANVPDAQKAEFEISPFSITKEYQGVGIPKGEERL 229 Query: 238 YNIVSWTH 245 ++ T Sbjct: 230 TAKINDTL 237 >gi|226304964|ref|YP_002764922.1| ABC transporter substrate-binding protein [Rhodococcus erythropolis PR4] gi|226184079|dbj|BAH32183.1| putative ABC transporter substrate-binding protein [Rhodococcus erythropolis PR4] Length = 334 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 88/229 (38%), Gaps = 10/229 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS 76 S L I+ RG L G++TG + G +GFDVD R ++ + DP Sbjct: 82 ASPQPPTPSLDAIRARGRLIVGLDTGSNLMSFRDPATGRLEGFDVDIAREIARDLLGDPE 141 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 KI+Y L + +R ALQ +D++ + T R + F + Q + + Sbjct: 142 KIEYRILTSDDRIAALQESMVDVVVKTMTITCER--REKVDFSTQYFSAEQRIQVLQGSP 199 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + ++ L+G +C GTT+ + + + + + + DA + Sbjct: 200 VRGIADLAGKRVCAARGTTSATRIQELQPEA----TVVTVPMWSDCLVVLQQGQVDAIST 255 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D + L L + +++ + P + + + + V+ T Sbjct: 256 DDTILAGLASQDP---YLMMVGGSLGVEPYGIGVNKDNPDLVRFVNGTL 301 >gi|330429005|gb|AEC20339.1| family 3 extracellular solute-binding protein [Pusillimonas sp. T7-7] Length = 299 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 95/236 (40%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQ 79 A+ L +++ G G + F + N GF + + ++ + + D +++ Sbjct: 27 ATTLKKVEQTGTFTVGTRAASIPFNYLDDNNQQSGFAWEITQRVADKVKETVARDDIQVR 86 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + + + R + ++ +D+ +T RE ++F + G + I + Sbjct: 87 PMEVTPQTRIPLVANQTVDLECSSTTHN--RERENQVSFSTSFFIVGTRMLTLANSPIKN 144 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G ++ V AGTT E L ++ + I+ + ++ R DA D Sbjct: 145 WEDLAGKNVVVSAGTTAERLLRKVNDEKKLRVNIILSKDIDNTFMTVDTGRADAAMMDDM 204 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 LY+L + P + ++ +++ + + DTE+ +V M+ + E+ Sbjct: 205 VLYSLIARSPDPKKWKVVGEVLQPEAYGCMLRKDDTEFKELVDNVITGMMNSGEMA 260 >gi|115351568|ref|YP_773407.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115281556|gb|ABI87073.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 271 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 92/249 (36%), Gaps = 11/249 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + L L +A L DI+K G L+ F V A G Sbjct: 1 MKIHTLATWLVGAALVTAGTVAHADRLDDIRKAGVLRVATFDSNPPFGYVDAKSNHIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + +Q P N R L S ++D++ N T R + F Sbjct: 61 DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F+ K + S QL+G + GTT E+TL + + + ++ Sbjct: 116 IPYFSSGQQFLAKKG-VLKSADQLNGLRVGADKGTTNEITLREKYPKA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I IS + + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 230 Query: 240 IVSWTHYAM 248 V+ T + Sbjct: 231 FVNDTLKGL 239 >gi|116492193|ref|YP_803928.1| amino acid ABC transporter periplasmic protein [Pediococcus pentosaceus ATCC 25745] gi|116102343|gb|ABJ67486.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pediococcus pentosaceus ATCC 25745] Length = 278 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 94/267 (35%), Gaps = 21/267 (7%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVK 51 M K + L ++ +S +K + G+ F + Sbjct: 1 MRKILKSVALIFTLMASLVLLSSCGAKGEVKNIDAWDQAQKTDSITWGVKADTKLFGLMD 60 Query: 52 -ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + KGFD+D +AL+ + +K ++ + ++ R L++ +D + T R Sbjct: 61 VKDSQIKGFDIDIAKALTKQMLGKKAKANFIQVTSQTRIPLLKNGNLDAIIATMTITKER 120 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHN 168 E + F + GQ ++ K I SV L G + G+ + + + Sbjct: 121 EKV--VDFSNSYFDAGQSLLVKKGSSIKSVKDLNKPGTKVIGVVGSNSVENIKKFAPKA- 177 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 I + + A ++ + A T D L+ + + N + ++ +K P Sbjct: 178 ---QVIQLQDYAQALTALKSGQGAALTTDNGILFGMAVDNPN---YQVVGKAFTKEPYGI 231 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELG 255 AI +G + ++ + + E Sbjct: 232 AINKGQGQLKKHLNQALKELEESGEYN 258 >gi|313891392|ref|ZP_07825008.1| ABC transporter, substrate-binding protein, family 3 [Dialister microaerophilus UPII 345-E] gi|313120167|gb|EFR43343.1| ABC transporter, substrate-binding protein, family 3 [Dialister microaerophilus UPII 345-E] Length = 281 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 110/253 (43%), Gaps = 21/253 (8%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGINTGLVGFAEV 50 M K F ++I+ ++ L F S + S + +IKK G L G+ + F + Sbjct: 1 MKKITMFLMAIVSILALTFASGCASNSETESKPYRSIAEIKKSGELIIGVFSDKAPFGYI 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 NG+++G+D+ F L+ + P +Y+ L R ++ ++DI+ N T R Sbjct: 61 DKNGNYRGYDIYFAERLAKDLGVKP---KYISLEPANRTEYAKTGKVDIILANFTMTKER 117 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + F G + K + I+SV QL G + V GTT E F ++ + Sbjct: 118 AE--QVDFALPYMKVAIGVVSPKNQNITSVEQLKGKKLIVAKGTTAETY----FTENHPE 171 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + F++ E A R DA++ D + + A + P V + + +APA+ Sbjct: 172 IELLKFDQYSETYNALLDKRGDAFSTDNTEVLAWAM--KNPEYKVGITHLGKDEVIAPAV 229 Query: 231 IQGDTEWYNIVSW 243 +G+ E + ++ Sbjct: 230 QKGNKELLDYINN 242 >gi|242241397|ref|YP_002989578.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] gi|242133454|gb|ACS87756.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] Length = 278 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 66/328 (20%), Positives = 111/328 (33%), Gaps = 66/328 (20%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K F ++ L L F S + A L DI+K G +K + F V + G+ Sbjct: 1 MKKQVF-ALTLLAGLVFLSGAAQADKLDDIQKAGVVKVAVFDSNPPFGYVDPQSKKLVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A+ A+ ++ N R L SK++D++S N T R + F Sbjct: 60 DVDVAEAIGKALGVK---VELRATNPANRIPLLTSKKVDLISANFTITDERAK--QVNFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + + I GT E+TL ++F + I ++ Sbjct: 115 IPYFATGQKFIARKG-ALKTPDDIKTLRIGADKGTVQEITLREHFPSAK----VISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEW 237 AA R A T D + L L + I P I+K + +G+ Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLGNLPADQKAGFEISPFSITKEYQGIGVPKGEDRL 229 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 ++ L ++K + Sbjct: 230 TQKINEV-------------------------------LLNLEKQGD------------- 245 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRG 325 ++ +++R G ++ PRG Sbjct: 246 -AVK-------IYNRWFGPDTKSAQPRG 265 >gi|91787876|ref|YP_548828.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91697101|gb|ABE43930.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 294 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 97/258 (37%), Gaps = 8/258 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F + +++ + + +A L + + V F+ + + GF Sbjct: 1 MK--FSTLMTAVLLTAGLAATASAQTLKKVADSNKITVSYREASVPFSYLIGSTKAVGFS 58 Query: 61 VDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 V+ A+ + ++ Y+P+ ++ R L + D+ +T R + Sbjct: 59 VELTEAIIDDVRKKVKKPNLEVAYMPVTSQNRIPLLVNGTYDLECGSTTNNSARGKDVA- 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F ++ G + K G+ + + L+ ++ GTT + Y N+ I+ Sbjct: 118 -FSINMFYTGTRLLTKKTSGVKNYADLTKKTVASTTGTTNAQVIRKYNTEKNLDMQLILG 176 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + ++ + R A+ D L+ L + P+ ++ D + P A + + D E Sbjct: 177 KDHDDSLLLVESDRAMAFAMDDILLFGLMANSKNPAALQVVGDSLQVEPYACMLRKDDPE 236 Query: 237 WYNIVSWTHYAMVTAEEL 254 + +V T ++ + E Sbjct: 237 FKKLVDGTITRLMKSGEF 254 >gi|83717385|ref|YP_438424.1| glutamate/aspartate ABC transporter periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis E264] gi|257141466|ref|ZP_05589728.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis E264] gi|83651210|gb|ABC35274.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis E264] Length = 299 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 86/261 (32%), Gaps = 8/261 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + + L I+ + G+ V F+ G Sbjct: 2 MKPFRPLLSIAVGCALAAAAHAEDASPTLKKIRDTSVVTLGVRESSVPFSYYDQRQQTIG 61 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + + + I + ++ +P+ ++ R +Q+ +D+ +T T R + Sbjct: 62 YSQEIALKIVDEIKKELNRTNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 119 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 ++F + G I K G+ L+G ++ AGTT E L + M I Sbjct: 120 QVSFSNSIFQYGMRLIAKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMSMQII 179 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ R A+ D LY K P ++VI + + D Sbjct: 180 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGSSPVSEAYGCMLRKDD 239 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + + M + E Sbjct: 240 PGFKQLADRVIARMQRSGEAE 260 >gi|160901104|ref|YP_001566686.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160366688|gb|ABX38301.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 299 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 97/255 (38%), Gaps = 8/255 (3%) Query: 4 DFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKG 58 F ++ + + + + + A L I+ G + G+ A + G Sbjct: 2 RFVLAHVAMACVVAATGAAHAQEAAGTLDKIQSTGKVVMGVRESSAPMAYAFGTTQKYVG 61 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + V+ C + + I KI+Y+ L ++ +Q+ +DI T L R+ + F Sbjct: 62 YHVELCEKVLAQIVPKA-KIEYMALTSQNTMPLVQNGTVDIGCGPTTNNLARQKQVA--F 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 TY + GI+S QL G + AGTT L Y + + + + + Sbjct: 119 AVTTYVSQVRMAVRADSGITSFKQLDGKPVAASAGTTAVQLLRKYGRDNGVNLPTSLGKD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R DA+ D + L + + P+ I+ +++ P+A + D + Sbjct: 179 HFESFLMLESGRADAFVLDDNLLAGVIANSKNPAGFKIVGEVLGSEPIAILFRRDDPAFK 238 Query: 239 NIVSWTHYAMVTAEE 253 V M+ + E Sbjct: 239 KAVDDVLVGMMASGE 253 >gi|77456456|ref|YP_345961.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77380459|gb|ABA71972.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 292 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 101/262 (38%), Gaps = 26/262 (9%) Query: 1 MY--KDFFVSILCLIILFFTS--------------FSTNASILGDIKKRGFLKCGINTGL 44 M K F L + L + A L IK R L G+ T Sbjct: 1 MKTAKALFALPLISLALLAGCNKTEEPAKPKVASESTAPAGYLDKIKARDKLIVGVFTDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V G + GFD D R + + D +K++++ + R LQS ++D++ N Sbjct: 61 PPFGFVNEAGRYVGFDTDIGRQFAKDLLGDENKVEFVAVEPASRIPFLQSDKVDLILANM 120 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F ++ + + + L+ + V GTT ++ L Sbjct: 121 TVTPERKE--AVEFTNPNLKVAVQALVPQGSEVKKLDDLATRTTIVTTGTTADIWLT--- 175 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 ++ + + FE+ E A R DAY D L++ N + +L + + Sbjct: 176 -KNHPDWKLLKFEKNSESLQALANGRGDAYAQDNLVLFSWAKQNPG---YRVLDEKLGAE 231 Query: 225 -PLAPAIIQGDTEWYNIVSWTH 245 P+APA+ +G+ E + V+ Sbjct: 232 APIAPAVKKGNIELRDWVNAEL 253 >gi|229493071|ref|ZP_04386866.1| bacterial extracellular solute-binding protein, family 3 [Rhodococcus erythropolis SK121] gi|229320101|gb|EEN85927.1| bacterial extracellular solute-binding protein, family 3 [Rhodococcus erythropolis SK121] Length = 328 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 86/229 (37%), Gaps = 10/229 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS 76 S L I+ RG L G++TG + G +GFDVD R ++ + DP Sbjct: 76 ASPQPPTPSLDAIRARGRLIVGLDTGSNLMSFRDPATGRLEGFDVDIAREIARDLLGDPE 135 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 KI+Y L + +R ALQ +D++ + T R + F + Q + + Sbjct: 136 KIEYRILTSDDRIAALQESMVDVVVKTMTITCER--REKVDFSTQYFSAEQRIQVLQGSS 193 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + + L+G +C GTT+ + + + + + DA + Sbjct: 194 VRGIDDLAGKRVCAARGTTSATRIQQLQPEA----TVVTVPMWSDCLVVLQQGQVDAIST 249 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D + L L + +++ + P + + + + V+ T Sbjct: 250 DDTILAGLASQDP---YLMMVGGSLGVEPYGIGVNKDNPDLVRFVNGTL 295 >gi|188591216|ref|YP_001795816.1| glutamate/aspartate transporter; ABC superfamily, periplasmic binding component [Cupriavidus taiwanensis LMG 19424] gi|170938110|emb|CAP63096.1| glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component [Cupriavidus taiwanensis LMG 19424] Length = 299 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 93/252 (36%), Gaps = 8/252 (3%) Query: 4 DFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 ++ ++ T+ + L IK G + G+ + F G+ Sbjct: 5 KLAALMIAGGVMCGTAQAAEQLTGTLKKIKDTGVITLGVRESSIPFNYNLGGVRQVGYSY 64 Query: 62 DF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D A+ + +++ +P+ ++ R LQ+ IDI +T L R+ + Sbjct: 65 DINMKIVEAIKDQLKLPNLQVKEIPITSQNRITLLQNGTIDIECGSTTNNLERQKQVA-- 122 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + G ++ K GI + L G ++ AGTT+E L + + I + Sbjct: 123 FTNSIFIIGTRIMVKKDAGIKDWADLKGKNVVTTAGTTSERLLRKMNDDQKLGMNIISTK 182 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R A+ D + LY + P++ +++ S+ I + D ++ Sbjct: 183 DHGQSFLTLESGRAVAFMMDDALLYGERAKAKNPADWIVVGKPQSRESYGCMIRKDDPQF 242 Query: 238 YNIVSWTHYAMV 249 + M+ Sbjct: 243 KKLSDTVISGMM 254 >gi|76574838|gb|ABA47312.1| probable binding protein component of ABC transporter [Pseudomonas cichorii] Length = 268 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 102/278 (36%), Gaps = 17/278 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M K ++ + + L S +A L DIKK G L+ F V A +G Sbjct: 1 MKK---LTAITALSLAVLSGLAHADRLEDIKKSGVLRVAAFDSNPPFGFVDAKSKQIEGL 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +A++ + +Q P N R L + ++D++ N T R + F Sbjct: 58 DVDYAKAIADKLGVK---LQLQPTNPANRVPLLMANKVDLVLANFTITPERAE--QVNFS 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI+ K + + L+ + V GT E L + F I ++ Sbjct: 113 IPYFSSGQQFIVKKG-TLKNQDDLNKWRVGVDKGTVNEGVLREKFP----GAKVIAYDDT 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R A T D L L ++ + P IS + I +G+T Sbjct: 168 PFAFTALRNGNVQAITQDGPKLIGLLANVPDKDKYEVPPFTISNDLIGVGIPKGETALTE 227 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 V+ T V E G QK + T + R Sbjct: 228 FVNQTL---VELESKGQAQKIYDTWFGPNTPTPLARLF 262 >gi|330950012|gb|EGH50272.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae Cit 7] Length = 304 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 7/241 (2%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPS-- 76 + L IK+ G + G + F+ + A+G G+ D + AI D Sbjct: 23 AAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHDIQLKIVEAIKKDLDMP 82 Query: 77 --KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K++Y + ++ R +Q+ +D+ +T + R + F + G + K Sbjct: 83 DLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVDFSIGIFEVGTRLLSKKD 140 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 L G ++ AGTT+E L M + I + E + R A+ Sbjct: 141 SSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAF 200 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L +P + + S + +GD + V A + ++ Sbjct: 201 MMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGDI 260 Query: 255 G 255 Sbjct: 261 N 261 >gi|238758025|ref|ZP_04619206.1| Glutamate/aspartate periplasmic-binding protein [Yersinia aldovae ATCC 35236] gi|238703779|gb|EEP96315.1| Glutamate/aspartate periplasmic-binding protein [Yersinia aldovae ATCC 35236] Length = 309 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 83/227 (36%), Gaps = 6/227 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKI 78 ++ L IK G + G V F+ G+ D+ + A+ ++ Sbjct: 36 SSDTLKKIKDSGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNVIVEAVKKKLNAPDLQV 95 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +P+ ++ R LQ+ D +T L R AF + G + K + Sbjct: 96 KLIPITSQNRIPLLQNGTFDFECGSTTNNLER--QQQAAFSNTIFVVGTRLLTKKGTEVK 153 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ V +GTT+E+ L + M I + + + R A+ D Sbjct: 154 DFKDLAGKAVVVTSGTTSEVLLNKLNEKDKMDMRIISAKDHGDSFRTLESGRAVAFMMDD 213 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + L + +P + I+ S+ + + D + ++ T Sbjct: 214 ALLAGERAKAKKPDQWDIVGTAQSQEAYGCMLRKNDPAFKTLMDETI 260 >gi|327474725|gb|EGF20130.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK408] gi|327490282|gb|EGF22070.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1058] Length = 270 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 100/259 (38%), Gaps = 14/259 (5%) Query: 17 FTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72 ++S + DI+KRG L G+ + F + + + G ++D + ++ + Sbjct: 22 AAPAQADSSTSQQVKDIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGIEIDIAKKIAKELG 81 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 I Y+P+ A+ R L + Q+D++ T R+ F Y D GF+++ Sbjct: 82 VK---INYVPVTAQTRGPLLDNGQVDMVIATFTITDERKEI--YNFTTPYYTDASGFLVN 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K I V L+ +I V G+ T+ L + + + + + E+ + RAHR D Sbjct: 137 KSSKIKDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRID 196 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A + D S L + IL K+ + +T+ + V Sbjct: 197 AISVDKSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKWKENG 251 Query: 253 ELGITQKNINQVSKDTTNP 271 L + D+T+ Sbjct: 252 SLQKLYDKYDLKPSDSTDD 270 >gi|326792530|ref|YP_004310351.1| ABC transporter periplasmic protein [Clostridium lentocellum DSM 5427] gi|326543294|gb|ADZ85153.1| ABC-type transporter, periplasmic subunit family 3 [Clostridium lentocellum DSM 5427] Length = 260 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 91/251 (36%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILF--FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + L L +F ++ + +K++ L + F + +G+ G Sbjct: 1 MLKKILLLGLSLCTMFSFVGCTNSTQTTYEKVKEKKELTFAMTGQYPPFNYIDESGELVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D A++ + + + L K+ D++ + T R ++F Sbjct: 61 FDIDIANAIADKMGVTAKP---ETIAWEGIITGLTGKRFDMIIGSMAITEER--LEKVSF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y+DG + + I+ ++ L+ A + V GTT L++ + + FE Sbjct: 116 SNPYYYDGAQLFVMQDSDIADINDLTNAKVGVVTGTTFHSYLSE----NYPNLEILQFES 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A + R DA L + + ++ + AI + D E Sbjct: 172 DVDNLRALKQGRMDALVTGK--FVGLSAPSKYGINIKVAGTLLYFEEIGVAIRKEDAELL 229 Query: 239 NIVSWTHYAMV 249 + V+ M+ Sbjct: 230 DAVNTALQDMI 240 >gi|187780001|ref|ZP_02996474.1| hypothetical protein CLOSPO_03597 [Clostridium sporogenes ATCC 15579] gi|187773626|gb|EDU37428.1| hypothetical protein CLOSPO_03597 [Clostridium sporogenes ATCC 15579] Length = 278 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 79/260 (30%), Gaps = 21/260 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K + ++ + L IK+ G + G++ Sbjct: 11 MKKTLLLVSSVILSIALLGGCGKTDKKLNSLEKIKEAGKITVGLDDSYPPMEFRDKENKL 70 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D + + Y + LAL S + D++ T R+ + Sbjct: 71 VGFDIDLGNEIGKKLGVKTE---YTTTDFNGILLALNSGKFDVIISGLSITDKRKE--AI 125 Query: 117 AFRPITYFDGQGFI------MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 F GQ I+ +S L +I Q G+T + + Sbjct: 126 DFSEPYVMGGQVIAINKNNNTINNNTINKLSDLKDKTIGCQLGSTGDKAATEIKGLK--- 182 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 ++++ E A R DA D A + ++ +L + +SK P+ Sbjct: 183 -ETKRYDKITEAFHELIAGRIDAVIMD--AQVGGYYISKEKDKYKVLEETVSKEPMGIGF 239 Query: 231 IQGDTEWYNIVSWTHYAMVT 250 + D E V + Sbjct: 240 KKEDKELKEAVQKALNELKE 259 >gi|262378934|ref|ZP_06072091.1| ABC-type amino acid transport/signal transduction system protein [Acinetobacter radioresistens SH164] gi|262300219|gb|EEY88131.1| ABC-type amino acid transport/signal transduction system protein [Acinetobacter radioresistens SH164] Length = 304 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 86/242 (35%), Gaps = 8/242 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIF----D 73 + S + L I++ G + G + F+ + G+ D + A+ Sbjct: 28 TGSAGSGTLEKIRQSGTVVLGHRDSSIPFSYIADNPNQPVGYAHDLQMKVVEALKQKLNK 87 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 K++Y + ++ R + + +D+ +T R + F + G + K Sbjct: 88 PDLKVRYNLVTSQNRIPLVSNGTVDLECGSTTNNKER--QQQVDFSVGFFQVGSRLLTAK 145 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 GI S L G + AGTT+E + + + + I + + + R A Sbjct: 146 DSGIKDFSDLKGKKVVTTAGTTSERYIRQHAQELGIG-EVISAKDHADSFLMLQNGRAAA 204 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D L K P + VI+ + + +GD E+ +V A + E Sbjct: 205 FMMDDILLAGEKSKAKEPDKWVIVGTPPIQEVYGCMLRKGDKEFKQVVDDAIKATYASGE 264 Query: 254 LG 255 + Sbjct: 265 IN 266 >gi|255318803|ref|ZP_05360029.1| glutamate/aspartate periplasmic-binding protein [Acinetobacter radioresistens SK82] gi|255304059|gb|EET83250.1| glutamate/aspartate periplasmic-binding protein [Acinetobacter radioresistens SK82] Length = 320 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 86/242 (35%), Gaps = 8/242 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIF----D 73 + S + L I++ G + G + F+ + G+ D + A+ Sbjct: 44 TGSAGSGTLEKIRQSGTVVLGHRDSSIPFSYIADNPNQPVGYAHDLQMKVVEALKQKLNK 103 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 K++Y + ++ R + + +D+ +T R + F + G + K Sbjct: 104 PDLKVRYNLVTSQNRIPLVSNGTVDLECGSTTNNKER--QQQVDFSVGFFQVGSRLLTAK 161 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 GI S L G + AGTT+E + + + + I + + + R A Sbjct: 162 DSGIKDFSDLKGKKVVTTAGTTSERYIRQHAQELGIG-EVISAKDHADSFLMLQNGRAAA 220 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D L K P + VI+ + + +GD E+ +V A + E Sbjct: 221 FMMDDILLAGEKSKAKEPDKWVIVGTPPIQEVYGCMLRKGDKEFKQVVDDAIKATYASGE 280 Query: 254 LG 255 + Sbjct: 281 IN 282 >gi|226362801|ref|YP_002780579.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4] gi|226241286|dbj|BAH51634.1| putative ABC transporter substrate-binding protein [Rhodococcus opacus B4] Length = 336 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 57/239 (23%), Positives = 101/239 (42%), Gaps = 10/239 (4%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRA 66 ++ L + S L +I RG L GI+ F+ G GFDVD Sbjct: 74 ALASLRPVTAPDVRAPGSALAEITARGRLVVGIDQNTNLFSFRDPTTGMLMGFDVDVAGE 133 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ +F DP+++++ L + +RF AL+ K +D++ ++T T R S +AF + + Sbjct: 134 MARDLFGDPARVEFRLLTSGDRFDALEKKAVDLVVKSTTITCER--SERVAFSTVYFQAY 191 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 Q ++ K GIS L+G +C A TT+ T+ A + ++ Sbjct: 192 QRLLVPKVSGISGPEDLAGKRVCTVADTTSLDTVRRVQPAA----TIVTVPDWDDCLVTL 247 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + R DA + D S L L + I+ + P + +G+ + V+ T Sbjct: 248 QQRRADAASTDDSILAGLAAQDPN---LEIVGPPLHSEPYGIGVNKGNEDLVRFVNGTL 303 >gi|17231622|ref|NP_488170.1| binding protein of ABC transporter component [Nostoc sp. PCC 7120] gi|17133265|dbj|BAB75829.1| binding protein of ABC transporter component [Nostoc sp. PCC 7120] Length = 301 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 100/250 (40%), Gaps = 11/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 MYK+ +++ L + + A + + + G L G + + FA A G G+ Sbjct: 1 MYKNLAIALFSLTLTTVIPGAALAETVMQKVSRTGVLTAGTSKDAMPFAYTNAQGQLTGY 60 Query: 60 DVDFCRAL---SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD + +++ +PL +R + ++Q+DI+ + +T R+ + Sbjct: 61 SVDMLSEIKRHLEKELGKKIQLKLVPLTPAQRIPKIVNRQVDIVCDASSFTWERDK--KV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G ++ + S L G I V A TT E + + + Sbjct: 119 DFSVSYGATGTQLLVKSGSNLGSPESLIGKRIGVLAQTTNEQAIKRV----QPQAKLVYL 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235 + E A + + DA++ D L + P + I+PD S+ +A + + ++ Sbjct: 175 KSRSEGYTALQEGKIDAFSSDSILLEGWLQRVENPDDFAIVPDRPYSREGIACMVPEDNS 234 Query: 236 EWYNIVSWTH 245 ++ + V+++ Sbjct: 235 KFLDAVNYSL 244 >gi|189310258|emb|CAP64356.1| probable extracellular solute-binding protein [Bordetella bronchiseptica 253] Length = 304 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 92/235 (39%), Gaps = 6/235 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIFDDPSKIQY 80 L I G + G + F+ AN G+ +D C A+ + I D +++Y Sbjct: 29 GTLKKISDTGVITIGHRETSIPFSYYDANQKPVGYSIDICARIVDAVKARIKRDDIQVKY 88 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 LP+ + R + + ID+ +T TL R+ + F T+ G FI K + ++ Sbjct: 89 LPVTSATRIPLMGNGTIDLECASTSNTLDRQKQVA--FSVTTFVTGNRFISLKSANLKTI 146 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G ++ +GT + +A + + + E R A+ D Sbjct: 147 DDLKGKTVVSTSGTANIRQANEINEARGLGMKVVPVKEHAEGFLMVETGRAAAFIMDDIL 206 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 LY L P + + D +S P A + + D ++ +V T ++ + + Sbjct: 207 LYGLAANAKEPDRYQVSGDSLSIEPYAIMLRRDDPQFKALVDDTIKSLYASGDFE 261 >gi|56962545|ref|YP_174271.1| glutamine ABC transporter substrate-binding protein [Bacillus clausii KSM-K16] gi|56908783|dbj|BAD63310.1| glutamine ABC transporter substrate-binding protein [Bacillus clausii KSM-K16] Length = 273 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 94/237 (39%), Gaps = 11/237 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQ 79 S S L I++ G+ F G+ +GFD+D + ++ + D +KI+ Sbjct: 34 SNEESTLAKIEEADKFVVGVKFDTRLFGLKDPGTGEVEGFDIDIAKEIAKELLGDENKIE 93 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + +K R L + QID + T R+ + F + + GQ ++ K I Sbjct: 94 LKEVTSKTRIPLLDNGQIDAIIATMTITEERKK--EVNFSDVYFEAGQSLLVEKGSDIQG 151 Query: 140 VSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + +G + G T+ L + I E +E A ++ + DA T D Sbjct: 152 IDDIGAGTKVLAVKGATSGQNLLEQAP----DAEVIELENYQEAFLALQSGQGDALTTDN 207 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 S LY + + S++ ++ + P A+ +GD E+ ++ + + Sbjct: 208 SILYGM---AEENSDYEVVGGTFTDEPYGIAVRKGDDEFTEKINEILADLKASGRYD 261 >gi|94310068|ref|YP_583278.1| extracellular solute-binding protein [Cupriavidus metallidurans CH34] gi|93353920|gb|ABF08009.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 303 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 101/261 (38%), Gaps = 8/261 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M ++ ++ + L K G L G + F+ + Sbjct: 8 MLAALWLGLVATFGATLAVAQDATVLSGTLKKAKDTGTLVIGYRESSLPFSYLNQASRPI 67 Query: 58 GFDVDFCRAL---SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G+ +D C + +S ++++P+ ++ RF A+ S +ID+ +T R Sbjct: 68 GYSIDICTEIVQAASEEVGRELAVKWVPVTSENRFEAITSGKIDLECGSTTRNAER--MQ 125 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 +AF P+ + G ++ + I S L G ++ V AGTT E +A K ++ + I Sbjct: 126 TVAFSPVIFIAGTKLMVPRASPIKSFRDLKGKTVVVTAGTTNEQAVAQLSKRFDLNINLI 185 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + A DAY GD LY + +I D IS P + + D Sbjct: 186 RVRDHADAFAVLSRGGADAYAGDDVLLYGFLAHYGAGKKFIITRDFISYDPYGIMLRKND 245 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 ++ +V ++T+ ++ Sbjct: 246 PQFATLVGKAVRDVITSGDME 266 >gi|54027317|ref|YP_121559.1| putative transporter substrate-binding protein [Nocardia farcinica IFM 10152] gi|54018825|dbj|BAD60195.1| putative transporter substrate-binding protein [Nocardia farcinica IFM 10152] Length = 323 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 93/228 (40%), Gaps = 10/228 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSK 77 + +T L I++RG L G++TG F+ G GFD D R ++ + P Sbjct: 72 TGATTGPTLDAIRRRGRLLVGLDTGSNLFSFRDPITGAVVGFDADIAREIARDLLGSPDL 131 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I++ + + +R ALQ + +D++++ T R +AF + Q + K GI Sbjct: 132 IEFRSMGSADREQALQDRTVDLVAKTMTITCERRR--KVAFSTVYLRADQRVLAMKDSGI 189 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 ++ L+G +CV GTT+ + A + + + + DA + D Sbjct: 190 RGLADLAGKRVCVVRGTTSLEHVRREQPAA----TVLTVPSWADCLVVLQQRQVDAVSTD 245 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + L L + ++ + IS P I + + V+ T Sbjct: 246 DAILAGLAAQDP---YTEVVGESISVEPYGIGIPREADDLVRFVNRTL 290 >gi|307637843|gb|ADN80293.1| Aminoacid ABC transporter binding protein [Helicobacter pylori 908] Length = 277 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G+++G+ Sbjct: 8 KMWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGNYQGY 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 68 DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G I K I ++ +L + V GTT + F + + FE+ Sbjct: 126 NPYMKVALGVIS-KDGIIKNIEELKNKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A ++ A D + L A P + + + K +APAI +G+ + Sbjct: 181 TETFLALLNNKATALAHDNTLLLAW--VKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238 Query: 240 IVSWTHYAMVTAEELG 255 ++ ++++++ L Sbjct: 239 WLNNEIDSLISSDFLK 254 >gi|254254170|ref|ZP_04947487.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] gi|124898815|gb|EAY70658.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] Length = 298 Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 83/251 (33%), Gaps = 8/251 (3%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F +L + L IK G + GI V F+ G Sbjct: 1 MNRRFRCLTVVLACALAGAAHAQALTGTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIG 60 Query: 59 FDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + D + + + + ++ +P+ ++ R LQ+ ID +T TL R+ Sbjct: 61 YSRDIAARIIDQLKTELNVPSLTVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQA 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + G F K G+ L+G ++ AGT+ E L + M I Sbjct: 121 A--FSNSIFLYGIRFSTRKDSGVKDFPDLAGKTVATTAGTSDERLLRKLNEEKGMNMTII 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E R A+ D LY + P + + + A + + D Sbjct: 179 SAKDHAEAFMNVTTGRAVAFVMDEPLLYGEIAKDRNPGAYTVTGTPLVHENYACMMRKDD 238 Query: 235 TEWYNIVSWTH 245 + +V Sbjct: 239 PAFKRVVDGVI 249 >gi|227113891|ref|ZP_03827547.1| extracellular solute-binding protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 278 Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 91/248 (36%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K L L L S + A L DI+K G +K + F V + G+ Sbjct: 1 MKKQILTVTL-LAGLASVSGAAQADKLDDIQKAGVVKIAVFDSNPPFGYVDPQSKKLVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A+ A+ ++ N R L S+++D+++ N T R + F Sbjct: 60 DVDIAEAIGKALGVK---VELRATNPANRIPLLSSQKVDLIAANFTITDERAK--QVNFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + + I GT E+TL +++ I ++ Sbjct: 115 IPYFATGQKFIARKG-VLKTPEDIKTLRIGADKGTVQEITLREHYPTAK----VISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237 AA R A T D + L L E I P I+K I +G+ Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLANVPDAQKAEFEISPFSITKEYQGVGIPKGEERL 229 Query: 238 YNIVSWTH 245 ++ T Sbjct: 230 TAKINDTL 237 >gi|289672924|ref|ZP_06493814.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae FF5] gi|330982422|gb|EGH80525.1| extracellular solute-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 290 Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 8/231 (3%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + + S ++S L IK R L G+ + F V G + GFD D + + + D Sbjct: 29 VAKAAPSPSSSYLETIKARDKLIVGVFSDKPPFGFVNEQGQYVGFDTDLGKRFAKDLLGD 88 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 KI+++ + R LQS ++D++ N T R + F ++ + Sbjct: 89 EKKIEFVVVEPASRIPFLQSDKVDLILANMTVTPER--REAVDFTNPNLRVAVQALVPQA 146 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + ++ L+ + V GTT +L L ++ + + FE+ E A R DAY Sbjct: 147 SPVKTLDDLASKTTIVTTGTTADLWLT----KNHPDWKVLKFEKNSESLQALANGRGDAY 202 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D L++ P V+ + ++P+APA+ +G+ E + V+ Sbjct: 203 AQDNLVLFSWA--KKNPGYRVLEQKLGDEAPIAPAVKKGNIELRDWVNTEL 251 >gi|293608330|ref|ZP_06690633.1| predicted protein [Acinetobacter sp. SH024] gi|292828903|gb|EFF87265.1| predicted protein [Acinetobacter sp. SH024] Length = 297 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 93/253 (36%), Gaps = 10/253 (3%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + +S + L + TS A L IK G + G + V A G Sbjct: 1 MKRSATSLIISTVMLCTVGATSQIQAADTLAKIKSTGKIVIGHRESSDPISYVVA-GKPV 59 Query: 58 GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ VD C + + K++Y + + R L + ID+ T + R+ Sbjct: 60 GYAVDICNQFANDIKKELKMPSLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQQQ 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +G F Y + GI S++ L+G ++ GTT++ + K + Sbjct: 120 VG--FSTNYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQAVNVQN 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + A + R A+ D + L L + P I+ ++S P + + Sbjct: 178 IYGKDHADSFAMMASGRAAAFVMDDNILAGLIAKSSTPKAFAIVGPVLSSEPYGIMLAKD 237 Query: 234 DTEWYNIVSWTHY 246 D ++ + T Sbjct: 238 DPKFKAVADRTVN 250 >gi|217423103|ref|ZP_03454605.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 576] gi|217394011|gb|EEC34031.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 576] Length = 292 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 83/236 (35%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQ 79 L I+ G + G+ V F+ G+ + + I ++ Sbjct: 20 GPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIGYSQEIALKIVDEIKKTLNRPNLTVR 79 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 +P+ ++ R +Q+ +D+ +T T R + ++F + G I+ K G+ Sbjct: 80 EIPITSQNRIPLVQNGTVDLECGSTTHTKER--ANQVSFSNSIFQYGMRLIVKKSSGVKD 137 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G ++ AGTT E L + M I + + ++ R A+ D Sbjct: 138 FPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQIISAKDHADAFLNVKSGRAVAFFMDEP 197 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 LY K P ++VI + + + D + + M + E Sbjct: 198 LLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDDPGFKQLADRVIARMQRSGEAE 253 >gi|322421000|ref|YP_004200223.1| family 3 extracellular solute-binding protein [Geobacter sp. M18] gi|320127387|gb|ADW14947.1| extracellular solute-binding protein family 3 [Geobacter sp. M18] Length = 264 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 80/246 (32%), Gaps = 11/246 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + V L++ S +K +G L G++ G GFD Sbjct: 1 MKKIWVVLSSLLVLACAVSAFAGDGSFKRVKSQGALTIGLDDAFPPMGYRNDKGQLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + KI + P AL SK+ D + T R+ + F Sbjct: 61 IDAAEEAGKRLG---IKINWQPTAWDGVIHALNSKKFDCIWNGMTITEERKKEVA--FTK 115 Query: 121 ITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 D + +K ++ L GA + VQ G++ + A +E Sbjct: 116 PYKMDGQVAVVRFGEKKFKKLADLKGAKVGVQKGSSAVEAVKKLPAA---PAEVREYEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R D D + RP + I+P I+K P A + D E Sbjct: 173 PKALLDLESKRLDTVIIDDAT--GRDFIAKRPGKFQIIPGNITKEPFGVAFRKEDVELRE 230 Query: 240 IVSWTH 245 V T Sbjct: 231 AVQKTL 236 >gi|327463114|gb|EGF09435.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1] Length = 270 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 99/259 (38%), Gaps = 14/259 (5%) Query: 17 FTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72 ++S + DI+KRG L G+ + F + + + G ++D + ++ + Sbjct: 22 AAPAQADSSTSQQVKDIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGIEIDIAKKIAKELG 81 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 I Y+P+ A+ R L + Q+D++ T R+ F Y D GF+++ Sbjct: 82 VK---INYVPVTAQTRGPLLDNGQVDMVIATFTITDERKEI--YNFTTPYYTDASGFLVN 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K I V L+ +I V G+ T+ L + + + + + E+ + RAHR D Sbjct: 137 KSSKIKDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRID 196 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A + D S L + IL K+ + +T+ + V Sbjct: 197 AISVDKSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKWKENG 251 Query: 253 ELGITQKNINQVSKDTTNP 271 L + +T+ Sbjct: 252 SLQKIYDKYDLKPSTSTDD 270 >gi|168186417|ref|ZP_02621052.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Clostridium botulinum C str. Eklund] gi|169295555|gb|EDS77688.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Clostridium botulinum C str. Eklund] Length = 272 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 93/257 (36%), Gaps = 21/257 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGD---------IKKRGFLKCGINTGLVGFAEV 50 M K + I+ + ++ T + + +KK G L G++ G Sbjct: 1 MKKIISILLIVMMGVVALTGCGSKGASAKSSGSDSSLESVKKSGKLLVGLDDGYPPMEFR 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + GFDVD R + I ++++P L LQSK+ D + T R Sbjct: 61 DEKNNLVGFDVDLAREIGKKIGVK---VEFIPTEFSGILLGLQSKKFDTIIAGFTMTDER 117 Query: 111 EISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + L F GQ + K I +S L G I Q G+ ++T + Sbjct: 118 KK--SLNFTEPYVLGGQIVAVKKGNTSIKKLSDLKGKIIGCQMGSAGQITAE---RKLKD 172 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + ++ E + R DA D A + +P + +L ++++K P+ A Sbjct: 173 IKELRKYGKITETFSDMSIGRIDAVIMD--AQVGGYYISKKPGQFEVLDEMVAKEPMGIA 230 Query: 230 IIQGDTEWYNIVSWTHY 246 +GD N V Sbjct: 231 FRKGDNALKNEVQKIIN 247 >gi|293572581|ref|ZP_06683555.1| glutamine-binding protein [Enterococcus faecium E980] gi|291607364|gb|EFF36712.1| glutamine-binding protein [Enterococcus faecium E980] Length = 271 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 98/250 (39%), Gaps = 15/250 (6%) Query: 2 YKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDW 56 K + +L + L N IL K + G+ F + + Sbjct: 5 KKIRLIFLLGIAFLALAGCKGNGLANEDILERSKSTNEISWGVKYDTRLFGMMDIESRTV 64 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFDVD +A++ I + K +++ + +K R L++ ID + T R+ + Sbjct: 65 QGFDVDIAKAITEKILGENGKAEFVEVTSKTRIPLLKNGNIDAIIATMTITDERKK--QV 122 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASIC-VQAGTTTELTLADYFKAHNMKYHPIV 175 F + + GQ ++ K I SV L+ ++ G+T+ + + N + Sbjct: 123 DFSDVYFDAGQALLVKKGSQIKSVDDLNASTTVLAVKGSTSAANIRQHAPDAN----ILE 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E E A ++ + DA T D + L + ++ P E+ ++ + P AI +G Sbjct: 179 LENYAEAFTALQSGQGDAMTTDNAILLGIA--DENP-EYELVGGTFTNEPYGIAINKGQE 235 Query: 236 EWYNIVSWTH 245 + V+ Sbjct: 236 NFLKAVNQAL 245 >gi|308183276|ref|YP_003927403.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori PeCan4] gi|308065461|gb|ADO07353.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori PeCan4] Length = 277 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 8 KMWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 68 DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G I K I ++ +L + V GTT + F + + FE+ Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A ++ A D + L A P + + + K +APAI +G+ + Sbjct: 181 TETFLALLNNKATALAHDNTLLLAWAKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238 Query: 240 IVSWTHYAMVTAEELG 255 ++ ++++++ L Sbjct: 239 WLNNEIDSLISSDFLK 254 >gi|170691878|ref|ZP_02883042.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170143162|gb|EDT11326.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 306 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 88/252 (34%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGLVGFAEV 50 M +++F + + + +S L + + + G V F+ Sbjct: 1 MKREYFARAIVTVAIATSSALQLHGVKAAEPALTGTLLKVSEDKVITIGYRDASVPFSYY 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 AN G+ +D + I D K++ +P+ ++ R LQ+ ID +T Sbjct: 61 DANQKPIGYSIDVANLVIERIRKDLKLPDLKVRTIPITSQNRLSLLQNGTIDFECTSTTN 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R ++F + G +++ K GI L ++ V AGTT+E +L Sbjct: 121 NAERAR--QVSFSNSFFIIGTRLLVNTKSGIKDFDDLKDKTVVVGAGTTSEKSLRKMNVE 178 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 +M I + E R A D + L + P+++ I+ S Sbjct: 179 KSMNMDIISAKDHAESFLMLTTGRAKAMMMDDALLAGERAKTRNPNDYEIVGTPQSYEAY 238 Query: 227 APAIIQGDTEWY 238 + + D Sbjct: 239 GCMLRKNDAPMK 250 >gi|262278835|ref|ZP_06056620.1| glutamate/aspartate transporter [Acinetobacter calcoaceticus RUH2202] gi|262259186|gb|EEY77919.1| glutamate/aspartate transporter [Acinetobacter calcoaceticus RUH2202] Length = 297 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 94/253 (37%), Gaps = 10/253 (3%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + +S L + TS A L IK G + G + V A G Sbjct: 1 MKRSATSLIISTFMLCTVGATSQIQAADTLAKIKSSGKIVIGHRESSDPISYVVA-GKPV 59 Query: 58 GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ VD C + + K++Y + + R L + ID+ T + R+ Sbjct: 60 GYAVDICNQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQEQ 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 +G F Y + GI S++ L+G ++ GTT++ + K + Sbjct: 120 VG--FSTNYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQALTIQN 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + + A + R A+ D + L L + P I+ ++S P + +G Sbjct: 178 IYGKDHSDSFAMMASGRAAAFVMDDNILAGLVAKSSTPKAFAIVGPVLSSEPYGIMLAKG 237 Query: 234 DTEWYNIVSWTHY 246 DT++ I T Sbjct: 238 DTKFKAIADRTVN 250 >gi|330901546|gb|EGH32965.1| extracellular solute-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 290 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 8/228 (3%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + + S ++S L IK R L G+ + F V G + GFD D + + + D Sbjct: 29 VAKAAPSPSSSYLETIKARDKLIVGVFSDKPPFGFVNEQGQYVGFDTDLGKRFAKDLLGD 88 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 KI+++ + R LQS ++D++ N T R + F ++ + Sbjct: 89 EKKIEFVVVEPASRIPFLQSDKVDLILANMTVTPER--REAVDFTNPNLRVAVQALVPQA 146 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + ++ L+ + V GTT +L L ++ + + FE+ E A R DAY Sbjct: 147 SPVKTLDDLASKTTIVTTGTTADLWLT----KNHPDWKVLKFEKNSESLQALANGRGDAY 202 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 D L++ P V+ + ++P+APA+ +G+ E + V+ Sbjct: 203 AQDNLVLFSWA--KKNPGYRVLEQKLGDEAPIAPAVKKGNIELRDWVN 248 >gi|78066232|ref|YP_369001.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77966977|gb|ABB08357.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 271 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 61/249 (24%), Positives = 91/249 (36%), Gaps = 11/249 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + + L L +A L DIKK G L+ F V G Sbjct: 1 MKINTLATWLVGAALITAGTVAHADRLDDIKKAGVLRVATFDSNPPFGYVDGKSNHIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + +Q P N R L S ++D++ N T R + F Sbjct: 61 DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F+ K + S QLS + GTT E+TL + F + ++ Sbjct: 116 IPYFSSGQQFLAKKG-VLKSADQLSALRVGADKGTTNEITLREKFPKA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I IS + + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 230 Query: 240 IVSWTHYAM 248 V+ T + Sbjct: 231 FVNDTLKGL 239 >gi|325996441|gb|ADZ51846.1| Aminoacid ABC transporter, binding protein precursor [Helicobacter pylori 2018] gi|325998030|gb|ADZ50238.1| Amino acid ABC transporter binding protein [Helicobacter pylori 2017] Length = 277 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G+++G+ Sbjct: 8 KMWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGNYQGY 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 68 DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G I K I ++ +L + V GTT + F + + FE+ Sbjct: 126 NPYMKVALGVIS-KDGIIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A ++ A D + L A P + + + K +APAI +G+ + Sbjct: 181 TETFLALLNNKATALAHDNTLLLAW--VKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238 Query: 240 IVSWTHYAMVTAEELG 255 ++ ++++++ L Sbjct: 239 WLNNEIDSLISSDFLK 254 >gi|171778294|ref|ZP_02919500.1| hypothetical protein STRINF_00342 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282994|gb|EDT48418.1| hypothetical protein STRINF_00342 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 290 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 61/261 (23%), Positives = 104/261 (39%), Gaps = 29/261 (11%) Query: 1 MY--KDFFVSILCLIILFFTSFS----------------TNASILGDIKKRGFLKCGINT 42 M K F + L+I+F S A L IKK G +K G+ + Sbjct: 1 MKIVKRFLAIVSLLLIVFAAGCSTSKSSTTKNSSSATSTAKARSLDAIKKSGTIKIGVFS 60 Query: 43 GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 F V G ++G+D+ F L+ + ++Y+ ++ R L S ++DI+ Sbjct: 61 DKKPFGYVDDKGKYQGYDIYFANRLAKDLGVK---VKYVSVDPASRVEYLTSAKVDIILA 117 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 N T R + F G + + IS V L G ++ V GTT E Sbjct: 118 NFTVTDERAK--QVDFALPYMKVALGVVSPSNQLISDVDALEGKTLIVGKGTTAETY--- 172 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 F+ H K + + F++ E A R DA + D + + A + V + + Sbjct: 173 -FEKHYPKVNLLKFDQYSEAYQALLDGRGDALSTDNTEVLAWA--LENKGYKVGITSLGD 229 Query: 223 KSPLAPAIIQGDTEWYNIVSW 243 +APA+ +G+TE + ++ Sbjct: 230 TDTIAPAVQKGNTELLDWIND 250 >gi|227329657|ref|ZP_03833681.1| extracellular solute-binding protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 280 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 91/248 (36%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K L L L S + A L DI+K G +K + F V + G+ Sbjct: 1 MKKQILTVTL-LAGLASVSGAAQADKLDDIQKAGVVKIAVFDSNPPFGYVDPQSKKLVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A+ A+ ++ N R L S+++D+++ N T R + F Sbjct: 60 DVDIAEAIGKALGVK---VELRATNPANRIPLLSSQKVDLIAANFTITDERAK--QVNFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + + I GT E+TL +++ I ++ Sbjct: 115 IPYFATGQKFIARKG-VLKTPEDIKTLRIGADKGTVQEITLREHYPTAK----VISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237 AA R A T D + L L E I P I+K I +G+ Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLANVPDAQKAEFEISPFSITKEYQGVGIPKGEERL 229 Query: 238 YNIVSWTH 245 ++ T Sbjct: 230 TAKINDTL 237 >gi|315634945|ref|ZP_07890227.1| ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] gi|315476497|gb|EFU67247.1| ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] Length = 284 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 16/249 (6%) Query: 2 YKDFFVSILCLIILFFTSFS--------TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 K + L+ + T+ + +S + +K+ G ++ G+ + F V + Sbjct: 6 KKVTALFATALLAIGLTACNDKEGKTELATSSTIEQLKQAGKVRVGVFSDKPPFGYVDSQ 65 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G +GFDV+ +A++ + D +K +Y+ + A R L S ++DI+ N T R Sbjct: 66 GKSQGFDVEIAKAITKDLLGDENKAEYVLVEAANRVEYLTSNKVDIILANFTVTPARAEV 125 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F G + I+ V+QL G ++ + GTT + F + Sbjct: 126 --VDFAKPYMKVALGVVSKDGAVITDVNQLKGKTLLINKGTTADAY----FTKNYPDIKL 179 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + FE+ E A R R DA D + L+A + V + ++ + +APA+ +G Sbjct: 180 LKFEQNTETFEALRDGRGDALAHDNTLLFAWA--KENSGFTVGVKNLGDQDFIAPAVKKG 237 Query: 234 DTEWYNIVS 242 D E N ++ Sbjct: 238 DVELLNWLN 246 >gi|226331009|ref|ZP_03806527.1| hypothetical protein PROPEN_04939 [Proteus penneri ATCC 35198] gi|225201804|gb|EEG84158.1| hypothetical protein PROPEN_04939 [Proteus penneri ATCC 35198] Length = 287 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 88/248 (35%), Gaps = 11/248 (4%) Query: 14 ILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD----FCR 65 ++ + + A L I + G V F+ G+ D + Sbjct: 1 MILGAAGAVQAEELTGTLKKINDNDIIIVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVQ 60 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A+ I +++ +P+ ++ R LQ+ D +T R +F + Sbjct: 61 AVKDKIGKPNLQVRLIPITSQNRIPLLQNGTFDFECGSTTNNEAR--QQQASFSNTIFIV 118 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G + K GI + LSG ++ V +GTT+E+ L M I + + Sbjct: 119 GTRLLAKKDSGIKDFADLSGKNVVVTSGTTSEMLLNKLNDEKKMNMRIISAKDHGDSFRT 178 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + R A+ D + L + +P E I+ S+ + + D ++ ++ T Sbjct: 179 LESGRAVAFMMDDALLAGERAKAKKPGEWEIVGTPQSEEAYGCMLRKDDAQFKALIDETI 238 Query: 246 -YAMVTAE 252 A + E Sbjct: 239 ANAQKSGE 246 >gi|253690631|ref|YP_003019821.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251757209|gb|ACT15285.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 278 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 91/248 (36%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K L L L S + A L DI+K G +K + F V + G+ Sbjct: 1 MKKQILTVTL-LAGLASISGAAQADKLDDIQKAGVVKIAVFDSNPPFGYVDPQSKKLVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A+ A+ ++ N R L S+++D+++ N T R + F Sbjct: 60 DVDIAEAIGKALGVK---VELRATNPANRIPLLSSQKVDLIAANFTITDERAK--QVNFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + + I GT E+TL +++ I ++ Sbjct: 115 IPYFATGQKFIARKG-VLKTPEDIKTLRIGADKGTVQEITLREHYPTAK----VISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237 AA R A T D + L L E I P I+K I +G+ Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLANVPDAQKAEFEISPFSITKEYQGVGIPKGEERL 229 Query: 238 YNIVSWTH 245 ++ T Sbjct: 230 TAKINDTL 237 >gi|212711638|ref|ZP_03319766.1| hypothetical protein PROVALCAL_02713 [Providencia alcalifaciens DSM 30120] gi|212685740|gb|EEB45268.1| hypothetical protein PROVALCAL_02713 [Providencia alcalifaciens DSM 30120] Length = 279 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 65/328 (19%), Positives = 112/328 (34%), Gaps = 65/328 (19%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M F S L + L T+ +A L DIK+ G ++ + F + G+ Sbjct: 1 MKARFLTSALLVAGLALTANVASADKLDDIKQAGVIRISVFDSNPPFGFIDPQTKKLAGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D +A++ + ++ P N R L S ++D++ N T R + F Sbjct: 61 DIDIAQAIADDLGVK---LELRPTNPANRIPLLTSGKVDLIGANFTITDERAK--QVDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + ++ I GT E+TL + F + I ++ Sbjct: 116 IPDFATGQKFIARKG-VLKTPEDIAPLRIGADKGTVQEVTLRERFPS----TKVISYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237 + AA R A T D + L L ++ I P ++K A +G+T Sbjct: 171 PQAFAALRNGNVQAITQDDAKLVGLLGNLPEKVKADFEISPFSLTKEYQALGASKGETRL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 V+ T L ++K Sbjct: 231 IENVNAT-------------------------------LLKLEKEGKA------------ 247 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRG 325 N E+++R G ++ PRG Sbjct: 248 -------N--EIYNRWFGPDTKAAQPRG 266 >gi|17546976|ref|NP_520378.1| amino-acid-binding periplasmic ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17429277|emb|CAD15964.1| probable amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum GMI1000] Length = 284 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 100/251 (39%), Gaps = 12/251 (4%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDF 63 + + + A L D+KK+G L CG+ F+ +K + + G+DVD Sbjct: 13 LACAAIVAAVTLAAVPAKADQLADVKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDM 72 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 C A++ ++ P L R LQ ++D+L+ + RE + F T+ Sbjct: 73 CNAVAKSLGVKP---VLKQLAVAARIPELQQGRVDLLAASLTHNKEREA--QIDFSVSTF 127 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 GQ ++ K GI+S++QL G + G+T E + K + F+ + Sbjct: 128 VTGQKAMVRKDSGITSLAQLDGKKVLTVKGSTMEANIGKTIK----NADIVSFDNSPQAL 183 Query: 184 AAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + + AY D + L ++ +LP +S A + + + + V+ Sbjct: 184 LALQQGKGAAYVNDETTLVGNMAKLGAASRDYALLPQNLSTEHFALGLRKNEPAFREQVN 243 Query: 243 WTHYAMVTAEE 253 + + E Sbjct: 244 KVLRGLEASGE 254 >gi|91778558|ref|YP_553766.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91691218|gb|ABE34416.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 272 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 66/325 (20%), Positives = 110/325 (33%), Gaps = 64/325 (19%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M +++ +L ++ + +A L DIKK G L+ F V G Sbjct: 1 MNLRVLGAVIAGSLLVMSA-AAHADRLDDIKKAGVLRVAAFDSNPPFGFVDPKSNQIVGL 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D+ RA+++ + ++ P N R L+S ++D++ N T R+ + F Sbjct: 60 DIDYARAVANRLGVK---LEVQPTNPANRIAFLKSGKVDLVFANFTITDDRKK--EVDFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G FI K ++S QL+ I GTT E + F I ++ Sbjct: 115 IPYFASGTQFIAKKG-TLTSPQQLNSLRIGADKGTTNEQQVRAQFP----GATIIAYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA R A T D L AL + + I P IS + +G+T N Sbjct: 170 PFAFAALRTGNVQAITQDGPKLVALLAKVPDKANYEIPPFTISNDYEGVGVPKGETRLLN 229 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 +V+ T Sbjct: 230 VVNDTLKD---------------------------------------------------- 237 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPR 324 + G G+++D G +S +PR Sbjct: 238 LEAKGTAGQIYDTWFGPKSAAPLPR 262 >gi|312963583|ref|ZP_07778064.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] gi|311282092|gb|EFQ60692.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] Length = 300 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 87/240 (36%), Gaps = 7/240 (2%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAI----FDDP 75 + L I + G V F+ V ++G G+ VD + I Sbjct: 24 AALDGTLSKIANAKSITLGYRDASVPFSYVGDSSGKPMGYSVDLASRIVERIQQKTGVAN 83 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +QY + ++ R +Q+ +D+ +T T R+ + F + + + Sbjct: 84 LNVQYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQVA--FSYGFIYVKGQLLTARDS 141 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 GI + L G ++ AGTT E L Y H I + E R A+ Sbjct: 142 GIKGFADLEGKNVVTTAGTTNERFLKSYNAEHKANMFVISAKDHGEAFKMLETGRAVAFY 201 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + LY + P V++ + S+ + + + D ++ +V+ + + E+ Sbjct: 202 MDDALLYGERAKAKDPHHWVVVGEEQSREIYSCMVRKDDPQFLAVVNEALADLYRSGEIN 261 >gi|302185657|ref|ZP_07262330.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. syringae 642] gi|330898559|gb|EGH29978.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 304 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 83/241 (34%), Gaps = 7/241 (2%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDD---- 74 + L IK+ G + G + F+ + A+G G+ D + AI D Sbjct: 23 AAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSHDIQLKIVEAIKKDLDMP 82 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K++Y + ++ R +Q+ +D+ +T R + F + G + K Sbjct: 83 DLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNAER--QQQVDFSIGIFEVGTRLLSKKD 140 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 L G ++ AGTT+E L M + I + E + R A+ Sbjct: 141 SSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAF 200 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L +P + + S + +GD + V A + ++ Sbjct: 201 MMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGDI 260 Query: 255 G 255 Sbjct: 261 N 261 >gi|210615937|ref|ZP_03290860.1| hypothetical protein CLONEX_03079 [Clostridium nexile DSM 1787] gi|210150030|gb|EEA81039.1| hypothetical protein CLONEX_03079 [Clostridium nexile DSM 1787] Length = 268 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 43/255 (16%), Positives = 88/255 (34%), Gaps = 13/255 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKANGD 55 M K + + + + A ++ G G + V +G+ Sbjct: 1 MKKKIALIMALALSVTTVFAGCGAKDDQKQRESGSGTQKTFTVGFDQDFPPMGFVGDDGE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D + ++ + D + P++ + + L S ID + T + Sbjct: 61 YTGFDLDLAKEVADRL--DMKFVP-KPISWDAKDMELSSGGIDCIWNGFTMTGREDK--- 114 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + + Q F++ K GI + + L+G + VQ ++ + L K + Sbjct: 115 YTWSEPYLNNEQVFVVKKDSGIKTQADLAGKVVDVQTDSSAQKALEQQEKLQKSFKELKI 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + DA D + A R ++ V+L D ++ A ++G+ Sbjct: 175 VADYNTAFMDLESGAVDAIAMD--IVVAKYQIEQRKADFVLLDDALASEEYAVGFLKGND 232 Query: 236 EWYNIVSWTHYAMVT 250 E + V T M Sbjct: 233 ELRDKVQKTLEEMAE 247 >gi|298735821|ref|YP_003728346.1| putative glutamine transport system substrate-binding protein [Helicobacter pylori B8] gi|298355010|emb|CBI65882.1| putative glutamine transport system substrate-binding protein [Helicobacter pylori B8] Length = 277 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 8 KMWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 68 DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G I K I ++ +L + V GTT + F + + FE+ Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A ++ A D + L A P + + + K +APAI +G+ + Sbjct: 181 TETFLALLNNKATALAHDNTLLLAWIKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238 Query: 240 IVSWTHYAMVTAEELG 255 ++ ++++++ L Sbjct: 239 WLNNEIDSLISSDFLK 254 >gi|315640020|ref|ZP_07895146.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus italicus DSM 15952] gi|315484229|gb|EFU74699.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus italicus DSM 15952] Length = 267 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 40/258 (15%), Positives = 88/258 (34%), Gaps = 8/258 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L ++ + ++ + + G++ V +G GFD Sbjct: 1 MKKWVSLVMLVASVVGLAACGSSEKTTESAADKKTVVVGLDDTFVPMGFKDDDGTIVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + D +K+++ P++ + L + ID++ R+ + F Sbjct: 61 VDLANAVFA--LTD-TKVKFQPIDWSMKETELANGTIDMIWNGYTMNDERKK--KVTFSD 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL---ADYFKAHNMKYHPIVFE 177 + Q + K GI++V + G + Q G++ AD K ++ Sbjct: 116 SYMKNTQVLVTKKSSGITTVDGMKGKILGAQEGSSGYNVFTKQADVLKDIVQDEDATLYA 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E R D D S++ I+ ++ A + +GD + Sbjct: 176 SFNEAFIDLEHGRIDGLLVDNVYAGYYLKQAGTLSDYNIIETPYTQESFAVGVRKGDDKL 235 Query: 238 YNIVSWTHYAMVTAEELG 255 ++ + + Sbjct: 236 AEKINEGLKTLKENGKYD 253 >gi|134098327|ref|YP_001103988.1| putative glutamate binding protein [Saccharopolyspora erythraea NRRL 2338] gi|291004253|ref|ZP_06562226.1| putative glutamate binding protein [Saccharopolyspora erythraea NRRL 2338] gi|133910950|emb|CAM01063.1| putative glutamate binding protein [Saccharopolyspora erythraea NRRL 2338] Length = 299 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 95/257 (36%), Gaps = 10/257 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSK-IQYL 81 + IK+RG + G+ G G + GFD++ R +++ + DP+ I Y Sbjct: 49 SPTFDRIKQRGRVTVGVKEDQPGLGFRDPVTGQYSGFDIEIARLVAAQLGLDPNTAIDYK 108 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSV 140 P+ + R AL + ++D R+ +G F + GQ ++ K I+ Sbjct: 109 PIPSTAREQALATGEVDYYVGTYTINDKRKEQVG--FAGPYFMAGQDVLVRKDNTDITGP 166 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G +C G+T + + + + F+R E + DA T D + Sbjct: 167 ETLKGKKVCSATGSTPIQRVKEQ--QLTEPQNIVEFQRYSECVQQLLDGQIDAVTTDDAI 224 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH-YAMVTAEELGITQK 259 L P + ++ S+ P + + D N ++ A + E + Sbjct: 225 LKGYAAQ--DPDKLKVVGKTFSEEPYGIGVAKDDIALRNKINDVLEQAAKSGEWKRVYDA 282 Query: 260 NINQVSKDTTNPDVQRF 276 + + P V R+ Sbjct: 283 TLGKSGTGAEPPPVDRY 299 >gi|329666939|gb|AEB92887.1| Glutamine ABC transporter, periplasmic glutamine-binding protein [Lactobacillus johnsonii DPC 6026] Length = 273 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 96/250 (38%), Gaps = 14/250 (5%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M + FF + L +F S ++ ++KK + G+ F + G Sbjct: 1 MKRKLRFFSLFIVLFSVFLLSACQKNTRNVYQEVKKSNEITWGVKADTRLFGLMSIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GF+VD AL+ I +K ++ AK + L++ ID + T R+ Sbjct: 61 IEGFEVDLANALTKEILGKNAKANFVQTTAKTKIPLLKNGNIDAVLAAMTITPERKK--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F ++ GQ ++ I S+ ++G + GTT + + + Sbjct: 119 IDFSDPYFYAGQSLLVKDDSTIKSIKDMNGKTALAVKGTTAVANVKKFAPKAK----VLE 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + A +A + A T D L + N + ++ +K P A+ +G T Sbjct: 175 FDDYGQAFTALKAGQGQAMTTDNGLLAGIATENKG---YKLVGGTYTKEPYGIAVNKGQT 231 Query: 236 EWYNIVSWTH 245 + N ++ Sbjct: 232 QMKNAINRAL 241 >gi|50123386|ref|YP_052553.1| extracellular solute-binding protein [Pectobacterium atrosepticum SCRI1043] gi|49613912|emb|CAG77365.1| extracellular solute-binding protein [Pectobacterium atrosepticum SCRI1043] Length = 278 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 90/248 (36%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K L L L S + A L DI+K G +K + F V + G+ Sbjct: 1 MKKQILTVTL-LAGLASVSGAAQADKLDDIQKAGVVKIAVFDSNPPFGYVDPQSKKLVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A+ A+ ++ N R L S+++D+++ N T R + F Sbjct: 60 DVDIAEAIGKALGVK---VELRATNPANRIPLLSSQKVDLIAANFTITDERAK--QVNFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + + I GT E+TL +++ I ++ Sbjct: 115 LPYFATGQKFIARKG-VLKTPDDIKTLRIGADKGTVQEITLREHYPTAK----VISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237 A R A T D + L L E I P I+K I +G+ Sbjct: 170 PLAFVALRNGNVQAITQDDAKLVGLLANVPDAQKAEFEISPFSITKEYQGVGIPKGEERL 229 Query: 238 YNIVSWTH 245 ++ T Sbjct: 230 TAKINDTL 237 >gi|320546920|ref|ZP_08041222.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] gi|320448438|gb|EFW89179.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] Length = 290 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 63/261 (24%), Positives = 104/261 (39%), Gaps = 29/261 (11%) Query: 1 MY--KDFFVSILCLIILFFTSFS----------------TNASILGDIKKRGFLKCGINT 42 M K F I L+I+F S A L IKK G +K G+ + Sbjct: 1 MKIVKRFLAIISLLLIVFAAGCSTSKSSTTKNSSSATSTAKARSLDAIKKSGTIKIGVFS 60 Query: 43 GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 F V G ++G+DV F L+ + ++Y+ ++ R L S ++DI+ Sbjct: 61 DKKPFGYVDDKGKYQGYDVYFANRLAKDLGVK---VKYVSVDPASRVEYLTSAKVDIILA 117 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 N T R + F G + + IS V L G ++ V GTT E Sbjct: 118 NFTVTDERAK--QVDFALPYMKVALGVVSPSNQLISDVDALEGKTLIVGKGTTAETY--- 172 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 F+ H K + + F++ E A R DA + D + + A + V + + Sbjct: 173 -FEKHYPKVNLLKFDQYSEAYQALLDGRGDALSTDNTEVLAWA--LENKGYEVGIISLGD 229 Query: 223 KSPLAPAIIQGDTEWYNIVSW 243 +APA+ +G+TE + ++ Sbjct: 230 TDTIAPAVQKGNTELLDWIND 250 >gi|325567190|ref|ZP_08143857.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus casseliflavus ATCC 12755] gi|325158623|gb|EGC70769.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus casseliflavus ATCC 12755] Length = 267 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 76/249 (30%), Gaps = 8/249 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K I + + ++ + + G++ V G+ GFD Sbjct: 1 MKKLLLTGIAAASVFLLGACGSSNDTTTSAADKEEVIVGLDDTFVPMGFKDDQGNIVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ +K+++ P++ + L + ID++ T RE + F Sbjct: 61 VDLATAILDLTG---TKVKFQPIDWSMKETELSNGTIDMIWNGYTKTAAREE--KVLFTD 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFE 177 + Q + K GI+S + G + Q G++ T + K ++ Sbjct: 116 TYMENKQVLVTAKSSGITSFDDMEGKVLGAQEGSSGYETFNNQPEVLKDLVDGNDATLYA 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E R D D + + + A + + D Sbjct: 176 SFNEAFIDLENGRIDGLLIDRVYAEYYLTQTGKTDDFNEIESPFEAEDFAVGVRKDDQAM 235 Query: 238 YNIVSWTHY 246 + ++ Sbjct: 236 ADKINDGLK 244 >gi|213970375|ref|ZP_03398504.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. tomato T1] gi|301381158|ref|ZP_07229576.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302063124|ref|ZP_07254665.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. tomato K40] gi|302132571|ref|ZP_07258561.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924846|gb|EEB58412.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. tomato T1] Length = 290 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 102/258 (39%), Gaps = 21/258 (8%) Query: 2 YKDFFVSILCLIILFF-------------TSFSTNASILGDIKKRGFLKCGINTGLVGFA 48 +K V L L + S + S L IK R L G+ + F Sbjct: 3 FKTALVLPLIAFTLLAGCDKPAEQKPVAKAAPSPSTSYLETIKARDKLIVGVFSDKPPFG 62 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V G + GFD D + + + D K++++ + R LQS ++D++ N T Sbjct: 63 FVNEQGQYVGFDTDLGKRFAKDLLGDEKKVEFVVVEPASRIPFLQSDKVDLILANMTVTP 122 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R S + F ++ + + ++ L+ + V GTT ++ L ++ Sbjct: 123 ER--SEAVDFTHPNLRVAVQALVPEASPVKTLDDLASKTTIVTTGTTADIWLT----KNH 176 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + + FE+ E A R DAY D L++ P V+ + ++P+AP Sbjct: 177 PDWKVLKFEKNSESLQALANGRGDAYAQDNLVLFSWA--KKNPGYRVLEQKLGDEAPIAP 234 Query: 229 AIIQGDTEWYNIVSWTHY 246 A+ +G+ E + V+ Sbjct: 235 AVKKGNIELRDWVNTELT 252 >gi|312602223|ref|YP_004022068.1| hypothetical protein RBRH_00467 [Burkholderia rhizoxinica HKI 454] gi|312169537|emb|CBW76549.1| unnamed protein product [Burkholderia rhizoxinica HKI 454] Length = 283 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 62/253 (24%), Positives = 95/253 (37%), Gaps = 12/253 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M ++L +L + +A L DIKK G L+ F V A G Sbjct: 14 MKSTVLSTLLA-GLLIVAAGVAHADRLDDIKKAGVLRVATFDSNPPFGFVDAKTHHIVGL 72 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + ++ P N R L S+++D++ N T R + F Sbjct: 73 DVDYAKALADKLGVK---LELQPTNPANRIPFLTSRKVDLVLANFTITEERAK--QVDFS 127 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F+ K + S QL+G I GT E+TL + F + ++ Sbjct: 128 IPYFASGQQFLAKKG-VLKSAEQLNGLRIGADKGTINEITLREKFPQA----TIVAYDDT 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I IS + I +G+T Sbjct: 183 PFAFAALRAGNVQAITQDGPKLVGLLANVPDKQNYEIPAFTISNDYMGVGIPKGETRLVA 242 Query: 240 IVSWTHYAMVTAE 252 V+ T + Sbjct: 243 FVNDTLRGLEKGG 255 >gi|167586688|ref|ZP_02379076.1| extracellular solute-binding protein, family 3 [Burkholderia ubonensis Bu] Length = 302 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 89/236 (37%), Gaps = 6/236 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI----FDDPSKIQ 79 A L I++ + G V F+ V A+G GF D C + +A+ +++ Sbjct: 30 AGTLAKIQQSNVIAIGHRETSVPFSYVDASGKVIGFSQDLCDRVIAAVRARTGKPDLQVR 89 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++P+ ++ R +Q+ +D+ T R + F + + GI Sbjct: 90 FIPVTSQNRMPLVQNGTVDLECGVTTNLAARHAQVA--FSTTFFVATTRLLTRTTSGIRD 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G ++ GTT+E L + M I + E + R AY D Sbjct: 148 FPDLAGKTVVTNQGTTSERLLRRMNEEKKMNMQIISAKDYGEGRLTLESGRAVAYMMDDV 207 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L ++ +P++ I+ S + + D ++ +V ++ + E+ Sbjct: 208 LLAGVRQLAAKPADWTIVGTPQSSEAYGFMLRKDDPQFKALVDGVLAQVMKSGEIN 263 >gi|104780401|ref|YP_606899.1| glutamate/aspartate ABC transporter periplasmic binding protein [Pseudomonas entomophila L48] gi|95109388|emb|CAK14088.1| glutamate/aspartate ABC transporter, periplasmic binding protein [Pseudomonas entomophila L48] Length = 305 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 85/237 (35%), Gaps = 8/237 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81 L IK G + G + F+ + + G+ D A+ A+ K++Y Sbjct: 28 GTLKKIKDSGTITLGHRDSSIPFSYLAGKPEPVGYSHDIQLAVVEALKKQLGTDIKVKYN 87 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GIS 138 + ++ R +Q+ +D+ +T + R+ +G F + G + K Sbjct: 88 LVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVG--FSVGIFEVGTRLLTKVKDGQPSFK 145 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGTT+E L MK + I + E + R A+ D Sbjct: 146 DFPDLAGKNVVTTAGTTSERILKAMNADKQMKMNVISAKDHGEAFNMLESGRAVAFMMDD 205 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L +P++ VI S + + D + V A + E+ Sbjct: 206 ALLAGEMAKAKKPTDWVITGTPQSYEIYGCMVRKDDPAFKKAVDEAIVAYFKSGEVN 262 >gi|28870257|ref|NP_792876.1| glutamine/glutamate ABC transporter periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28853504|gb|AAO56571.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|331016472|gb|EGH96528.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 290 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 101/258 (39%), Gaps = 21/258 (8%) Query: 2 YKDFFVSILCLIILFF-------------TSFSTNASILGDIKKRGFLKCGINTGLVGFA 48 +K V L L + S + S L IK R L G+ + F Sbjct: 3 FKTALVLPLIAFTLLAGCDKPAEQKPVAKAAPSPSTSYLETIKARDKLIVGVFSDKPPFG 62 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V G + GFD D + + + D K++++ + R LQS ++D++ N T Sbjct: 63 FVNEQGQYVGFDTDLGKRFAKDLLGDEKKVEFVVVEPASRIPFLQSDKVDLILANMTVTP 122 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R + F ++ + + ++ L+ + V GTT ++ L ++ Sbjct: 123 ERAE--AVDFTHPNLRVAVQALVPEASPVKTLDDLASKTTIVTTGTTADIWLT----KNH 176 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + + FE+ E A R DAY D L++ P V+ + ++P+AP Sbjct: 177 PDWKVLKFEKNSESLQALANGRGDAYAQDNLVLFSWA--KKNPGYRVLEQKLGDEAPIAP 234 Query: 229 AIIQGDTEWYNIVSWTHY 246 A+ +G+ E + V+ Sbjct: 235 AVKKGNIELRDWVNTELT 252 >gi|261344518|ref|ZP_05972162.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Providencia rustigianii DSM 4541] gi|282567430|gb|EFB72965.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Providencia rustigianii DSM 4541] Length = 280 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 65/328 (19%), Positives = 112/328 (34%), Gaps = 65/328 (19%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M S L + L T+ +A L DIK+ G ++ + F + G+ Sbjct: 1 MKARILTSALLVAGLALTANVASADKLDDIKQAGVIRISVFDSNPPFGFIDPKTKKLAGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D +A++ + ++ P N R L S ++D++ N T R + F Sbjct: 61 DIDIAQAIADDLGVK---LELRPTNPANRIPLLTSGKVDLIGANFTITDERAK--QVDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + ++ I GT E+TL + F I ++ Sbjct: 116 IPDFATGQKFIARKG-VLKTPEDIAPLRIGADKGTVQEVTLRERFP----NTKVISYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237 + AA R A T D + L L ++ I P ++K A A +G+T Sbjct: 171 PQAFAALRNGNVQAITQDDAKLVGLLGNLPEKVKADFEISPFSLTKEYQALAASKGETRL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 V+ T L ++K Sbjct: 231 VESVNET-------------------------------LLKLEKQGKA------------ 247 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRG 325 N E+++R G +++ PRG Sbjct: 248 -------N--EIYNRWFGPETKAAQPRG 266 >gi|326384625|ref|ZP_08206303.1| extracellular solute-binding protein family 3 protein [Gordonia neofelifaecis NRRL B-59395] gi|326196592|gb|EGD53788.1| extracellular solute-binding protein family 3 protein [Gordonia neofelifaecis NRRL B-59395] Length = 328 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 51/225 (22%), Positives = 91/225 (40%), Gaps = 10/225 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S + I KRG L G + G + +GD KGFD+D +S+AIF DP+ I+Y Sbjct: 83 GSTMDRIAKRGRLVVGTDLGSNPLSFRDPISGDVKGFDIDVAHWISAAIFGDPNLIEYRM 142 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + R AL++ +DI+ + T + ++F Y Q + ++ GIS S Sbjct: 143 ITNDNRSEALENGTVDIVVKTMSITC--DRLKTVSFSVPYYAASQQILAYRNSGISQASD 200 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++C +T+ + + + I + + + DA T D L Sbjct: 201 LAGKNVCATRSSTSIARVQEAVPSAKF----ITTASWADCLVMMQQGQVDAITSDDPILA 256 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 + + ++ D + I +G + V+ A Sbjct: 257 GIAAQDP---WVQVVGDSLGTEYYGVGIPKGQDDLVRFVNGVLAA 298 >gi|317053431|ref|YP_004119198.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] gi|316953170|gb|ADU72642.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 302 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 90/255 (35%), Gaps = 6/255 (2%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F ++ + L I G + G G V F+ G+ +D C Sbjct: 7 LFTVFTLGMLALPVAGEELNGTLKKIADSGEIAVGHRDGAVPFSYYDDKQQPIGYAMDIC 66 Query: 65 ----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 A+ + + K+ + + R L + ID+ T R+ + F Sbjct: 67 GAVVDAVKAKLNKPDLKVDTMAVTGATRIPLLANGTIDMECGTTTNNAERQK--QVTFST 124 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + K +S +++L G ++ AGTT+ + D A ++ ++ + + Sbjct: 125 TYFVAAVRIMSKKSAPVSDMAELKGKAVVTLAGTTSVKIINDANNAQHLGMRILLAKDLA 184 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E R A+ D +L + T P ++ I +S P + + D ++ + Sbjct: 185 EGMLTLETGRAAAFIFDDVSLAGARATAKSPDDYQISEQPLSVEPYGIMLRRDDPQFKAL 244 Query: 241 VSWTHYAMVTAEELG 255 V+ + + + Sbjct: 245 VNAAIEGLYKSGAIN 259 >gi|169796304|ref|YP_001714097.1| amino acid ABC transporter periplasmic substrate-binding protein [Acinetobacter baumannii AYE] gi|215483763|ref|YP_002325988.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB307-0294] gi|294837744|ref|ZP_06782427.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp. 6013113] gi|294859369|ref|ZP_06797138.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter sp. 6013150] gi|301510868|ref|ZP_07236105.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB058] gi|169149231|emb|CAM87113.1| putative amino acid transport protein (ABC superfamily, peri_bind) [Acinetobacter baumannii AYE] gi|213987513|gb|ACJ57812.1| Glutamine-binding protein precursor (GlnBP) [Acinetobacter baumannii AB307-0294] Length = 288 Score = 145 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 50/224 (22%), Positives = 100/224 (44%), Gaps = 8/224 (3%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + S + IKK G ++ G+ + F + A G +GFDV+ + ++ + D +K++ Sbjct: 38 TTQTTSSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHIAKDLLGDENKVE 97 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++ A R L++ ++DI+ N T R+ + F G + K I+ Sbjct: 98 FVLTEAANRVEYLKANKVDIIFANFTVTPERKEV--VDFAKPYLKVALGVVSPKSHPITD 155 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V+QL ++ V GTT + +F + + +E+ E A + R A D Sbjct: 156 VAQLKDKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGTALAHDNL 211 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + A + P+ V + ++ + +APA+ +GD E + ++ Sbjct: 212 LVLAWA--KENPNYTVGITNLGEQDLIAPAVKKGDKELLDWLNQ 253 >gi|167741079|ref|ZP_02413853.1| putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 14] Length = 242 Score = 145 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 40/244 (16%), Positives = 82/244 (33%), Gaps = 6/244 (2%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 + + L I+ G + G+ V F+ G+ + Sbjct: 1 MLSIAVGCALAAAAHADDAGPTLKKIRDTGVVTLGVRESSVPFSYYDQQQRTIGYSQEIA 60 Query: 65 RALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + I ++ +P+ ++ R +Q+ +D+ +T T R + ++F Sbjct: 61 LKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--ANQVSFSN 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + G I+ K G+ L+G ++ AGTT E L + M I + Sbjct: 119 SIFQYGMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQIISAKDHA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + ++ R A+ D LY K P ++VI + + + D + + Sbjct: 179 DAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDDPGFKQL 238 Query: 241 VSWT 244 Sbjct: 239 ADRV 242 >gi|253827634|ref|ZP_04870519.1| glutamine ABC transporter, periplasmic glutamine- binding protein glnH [Helicobacter canadensis MIT 98-5491] gi|253511040|gb|EES89699.1| glutamine ABC transporter, periplasmic glutamine- binding protein glnH [Helicobacter canadensis MIT 98-5491] Length = 273 Score = 145 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 13/247 (5%) Query: 1 MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K F + +L + L + ++ L IK++G + G+ + F + G Sbjct: 1 MKKIFLIVMLGFLGLGLVGCGEAQQNASNSLEAIKQKGVITIGVFSDKPPFGFINKEGGN 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDV R ++ + D SK+++ + A R L+S ++D++ N T RE + Sbjct: 61 DGFDVQVSRQIAKDLLGDSSKVKFELVEAASRVEFLKSGKVDVIMANFTKTPEREAV--V 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G + K I S+ L G + V GTT + F ++ + + + Sbjct: 119 DFALPYMKVALGVVS-KDGAIKSIEDLKGKKLIVNKGTTADFY----FSKNHPEIELLKY 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ E A + R DA D ++A + P V + + ++ +APA+ +GD E Sbjct: 174 DQNTETFLALKDGRGDALAHDNLLVFAWA--KENPGFEVGITKLGNEDVIAPAVKKGDKE 231 Query: 237 WYNIVSW 243 ++ Sbjct: 232 LLEWLNK 238 >gi|221197899|ref|ZP_03570945.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2M] gi|221204543|ref|ZP_03577560.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2] gi|221175400|gb|EEE07830.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2] gi|221181831|gb|EEE14232.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2M] Length = 338 Score = 145 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 64/249 (25%), Positives = 93/249 (37%), Gaps = 11/249 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M L + L + A L DIKK G L+ F V A G Sbjct: 68 MKIHTLAKALVAVALIAAGTAAQADRLDDIKKAGVLRVATFDSNPPFGYVDAKTNRIVGL 127 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + +Q P N R L S ++D++ N T R + F Sbjct: 128 DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITEERAK--QVDFS 182 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F+ K + S QL+G I GTT E+TL + F + ++ Sbjct: 183 IPYFSSGQQFLAKKG-VLKSADQLNGLRIGADKGTTNEITLREKFPKA----TIVAYDDT 237 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I P IS + + +G+T Sbjct: 238 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPPFTISNDYMGVGVPKGETRLLG 297 Query: 240 IVSWTHYAM 248 V+ T + Sbjct: 298 FVNDTLKGL 306 >gi|33595038|ref|NP_882681.1| extracellular solute-binding protein [Bordetella parapertussis 12822] gi|33599318|ref|NP_886878.1| extracellular solute-binding protein [Bordetella bronchiseptica RB50] gi|33565114|emb|CAE40067.1| probable extracellular solute-binding protein [Bordetella parapertussis] gi|33575364|emb|CAE30827.1| probable extracellular solute-binding protein [Bordetella bronchiseptica RB50] Length = 304 Score = 145 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 6/235 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQY 80 L I G + G + F+ AN G+ +D C + A+ D +++Y Sbjct: 29 GTLKKISDTGVITIGHRETSIPFSYYDANQKPVGYSIDICTRIVDAVKTRIKRDDIQVKY 88 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 LP+ + R + + ID+ +T TL R+ + F T+ G FI K + ++ Sbjct: 89 LPVTSATRIPLMGNGTIDLECASTSNTLDRQKQVA--FSVTTFVTGNRFISLKSANLKTI 146 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G ++ +GT + +A ++ + + E R A+ D Sbjct: 147 DDLKGKTVASTSGTANIRQANEINEARSLGMKVVPVKEHAEGFLMVETGRAAAFIMDDIL 206 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 LY L P + + D +S P A + + D ++ +V T ++ + + Sbjct: 207 LYGLAANAKEPDRYQVSGDSLSIEPYAIMLRRDDPQFKALVDDTIKSLYASGDFE 261 >gi|110801642|ref|YP_698644.1| amino acid ABC transporter (binding protein) [Clostridium perfringens SM101] gi|110682143|gb|ABG85513.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens SM101] Length = 262 Score = 145 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 93/237 (39%), Gaps = 9/237 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ ++ ++IL F ++ + K + G++ V NGD GFD Sbjct: 1 MKKLLFL-LIGIVILSILIFGCSSKKIETKKDSNKVIIGMDETFVPMGFKNENGDIVGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + K+ + P++ + L + ID++ T RE +AF Sbjct: 60 VDLAKEAFKRM---NLKVIFQPIDWSMKETELTNGNIDLIWNGYTMTPEREK--KVAFTN 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY--FKAHNMKYHPIVFER 178 + Q + I+++ L G ++ Q G+++ TL + P++F+ Sbjct: 115 SYLKNRQVIVTLSNSNINTLKDLKGKTVTTQDGSSSLDTLFENPELTKSFKNGEPVLFDS 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + A R DA D L + + PS+ +L + + + + + + Sbjct: 175 FNDCFMDLEAGRSDAVVCDE-ILAQYYIFKNDPSKFHVLTEDLGEESYSIGLRKNSN 230 >gi|154175491|ref|YP_001408468.1| acriflavine resistance protein [Campylobacter curvus 525.92] gi|112802700|gb|EAU00044.1| acriflavine resistance protein [Campylobacter curvus 525.92] Length = 288 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 109/280 (38%), Gaps = 25/280 (8%) Query: 1 MYKDFFVSILCLIILFFTSFS--------------TNASILGDIKKRGFLKCGINTGLVG 46 M K + + +F T A + IK+RG+++ G+ + Sbjct: 1 MRKFSIFFLAVIATVFLTGCGEEKGADKSASAPSEQKADAIAKIKERGYVRIGVFSDKPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V +G +G+D+ F + ++ + D SK+++ + A R L + ++DI N Sbjct: 61 FGYVDKDGKNQGYDIYFAKRIAKDMLGDESKVKFELVEAAGRVEVLTADKVDITLANFTK 120 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R + + F G + + I SV +L G + V GTT + F Sbjct: 121 TPER--AQVVDFALPYMKVSLGVVSPEGDVIKSVDELKGKKLIVNKGTTADAY----FTK 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + +++ E AA R A D + L+A + P V + + + Sbjct: 175 NYPDIELVKYDQNTETFAALVDKRGAALAHDNALLFAWA--KENPGFVVGIEALGDVDVI 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 APA+ +G+T ++ ++ + K+ + K Sbjct: 233 APAVKKGNTALLEWLN---NEIIELGKENFFHKDYDATLK 269 >gi|167628828|ref|YP_001679327.1| glutamine abc transporter, glutamine-binding protein [Heliobacterium modesticaldum Ice1] gi|167591568|gb|ABZ83316.1| glutamine abc transporter, glutamine-binding protein [Heliobacterium modesticaldum Ice1] Length = 267 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 76/254 (29%), Gaps = 16/254 (6%) Query: 1 MYKDF---FVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M K + +L L +L + + A + +K + F Sbjct: 1 MKKWVKTGLMGMLALGMLITAAGCGGGEKAAQAPTGDKSSAKKTIKVATDAAYAPFEWKD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G+ GFD+D +A+ + D I+ + AL +K +D+L T R+ Sbjct: 61 EKGEIVGFDIDLIKAVGKELNAD---IELIDTPFDGIIAALTNKNVDMLISAMTITEKRK 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + F + Q + + + + G + VQ TT + + Sbjct: 118 E--SIDFSKPYFVAVQAIAVKEGSPVKKFDDIKGLKVGVQNSTTGQYVVEKLLGEK--SD 173 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ D D + N +I K A+ Sbjct: 174 KIFRYDTTPMAMNMLSNGDVDVVVADKPVVQHFLKNNPNAKMTLIDDASFEKEEYGIAVR 233 Query: 232 QGDTEWYNIVSWTH 245 +G+TE V+ Sbjct: 234 KGETELLKQVNDAL 247 >gi|257866713|ref|ZP_05646366.1| amino acid-binding protein Abp [Enterococcus casseliflavus EC30] gi|257872770|ref|ZP_05652423.1| amino acid-binding protein Abp [Enterococcus casseliflavus EC10] gi|257876304|ref|ZP_05655957.1| amino acid-binding protein Abp [Enterococcus casseliflavus EC20] gi|257800671|gb|EEV29699.1| amino acid-binding protein Abp [Enterococcus casseliflavus EC30] gi|257806934|gb|EEV35756.1| amino acid-binding protein Abp [Enterococcus casseliflavus EC10] gi|257810470|gb|EEV39290.1| amino acid-binding protein Abp [Enterococcus casseliflavus EC20] Length = 267 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 76/249 (30%), Gaps = 8/249 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K I + + ++ + + G++ V G+ GFD Sbjct: 1 MKKLLLTGIAAASVFLLGACGSSNDTTTSAADKEEVIVGLDDTFVPMGFKDDQGNIVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ +K+++ P++ + L + ID++ T RE + F Sbjct: 61 VDLATAILDLTG---TKVKFQPIDWSMKETELSNGTIDMIWNGYTKTAAREE--KVLFTD 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFE 177 + Q + K GI+S + G + Q G++ T + K ++ Sbjct: 116 TYMENKQVLVTAKASGITSFDDMEGKVLGAQEGSSGYETFNNQPEVLKDLVDGNDATLYA 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E R D D + + + A + + D Sbjct: 176 SFNEAFIDLENGRIDGLLIDRVYAEYYLTQTGKTDDFNEIESPFEAEDFAVGVRKDDQAM 235 Query: 238 YNIVSWTHY 246 + ++ Sbjct: 236 ADKINDGLK 244 >gi|17546980|ref|NP_520382.1| putative amino-acid-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17429281|emb|CAD15968.1| putative amino-acid-binding periplasmic (pbp) abc transporter protein [Ralstonia solanacearum GMI1000] Length = 308 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 89/241 (36%), Gaps = 8/241 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFD 73 + + + L IK+ G + G + F+ ++G+ G+ + + + Sbjct: 28 GAQAQSNDTLAKIKQSGVISVGYRESSIPFSYEASSGNITGYSQEISNLIVDGVKKKLGL 87 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++ P+ ++ R LQ+ ID +T L R+ + F + G ++ K Sbjct: 88 SGLQVKLTPITSQNRIPLLQNGTIDFECGSTTNNLERQKQVA--FSNNIFIYGMLMLVKK 145 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERVEEIDAAYRAHRC 191 GI L G ++ AGTT + L K + I+ + + + R Sbjct: 146 DAGIKDFPDLKGKTVVTTAGTTEDRILQKMNGEAKDADKMNLILAKDHGQAFLTLESGRA 205 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 A+ D LY + ++ V++ + A + + D + + ++T+ Sbjct: 206 VAFVMDEPLLYGERTKAKNQNDWVVVGTPLQTETYACMMRKDDPAFKKVADDVIADLMTS 265 Query: 252 E 252 Sbjct: 266 G 266 >gi|213156960|ref|YP_002319005.1| ABC transporter, periplasmic binding protein [Acinetobacter baumannii AB0057] gi|301344841|ref|ZP_07225582.1| ABC transporter, periplasmic binding protein [Acinetobacter baumannii AB056] gi|301596930|ref|ZP_07241938.1| ABC transporter, periplasmic binding protein [Acinetobacter baumannii AB059] gi|213056120|gb|ACJ41022.1| ABC transporter, periplasmic binding protein [Acinetobacter baumannii AB0057] Length = 288 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 8/224 (3%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + S + IKK G ++ G+ + F + A G +GFDV+ + ++ + D +K++ Sbjct: 38 TTQTTSSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHIAKDLLGDENKVE 97 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++ A L++ ++DI+ N T R+ + F G + K I+ Sbjct: 98 FVLTEAANLVEYLKANKVDIIFANFTVTPERKEV--VDFAKPYLKVALGVVSPKSHPITD 155 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V+QL ++ V GTT + +F + + +E+ E A + R A D Sbjct: 156 VAQLKDKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGTALAHDNL 211 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + A + P+ V + ++ + +APA+ +GD E + ++ Sbjct: 212 LVLAWA--KENPNYTVGITNLGEQDLIAPAVKKGDKELLDWLNQ 253 >gi|187926114|ref|YP_001892459.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] gi|241665602|ref|YP_002983961.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] gi|187727868|gb|ACD29032.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] gi|240867629|gb|ACS65289.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 295 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 67/307 (21%), Positives = 106/307 (34%), Gaps = 65/307 (21%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQ 79 +A L DIKK G L+ G+ F A G G DVD+ + +++ + ++ Sbjct: 43 QAHADKLDDIKKAGVLRVGVFDANPPFGYADAKTGQPVGLDVDYAQEIANKLGVK---LE 99 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 N R L S ++DI++ N T R+ + F + G FI K + Sbjct: 100 LRATNPANRVPLLTSGKVDIVAANFTITDERKK--QIEFSTPYFASGLQFIARKG-VLKQ 156 Query: 140 VSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L G + V GTT E TL D + I ++ A R A+ D Sbjct: 157 PDDLKRDGIRLGVDKGTTQETTLRDGYPKA----RVIAYDDSPLALTALRTGAIQAFAQD 212 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + L AL T SE I P ++++ + + +G+T+ + Sbjct: 213 GAKLGALLATLPNRSELEISPFVLTREYMGIGVPKGETKLTATIDQILQ----------- 261 Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317 GL KD G G ++DR G + Sbjct: 262 --------------------------------GLEKD---------GTAGRIYDRWFGPK 280 Query: 318 SELKIPR 324 S +PR Sbjct: 281 SAAPLPR 287 >gi|295096060|emb|CBK85150.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 276 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 95/248 (38%), Gaps = 13/248 (5%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWK 57 M K + + S A L DIK G +K F + A + Sbjct: 5 MKGFKKRAQVLGLVAAWGLVSAQAQADRLADIKAAGVVKVATFDANPPFGSIDAKTHEIV 64 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+DVDF +AL+ ++ ++ + N R LQS + D++ + T R + + Sbjct: 65 GYDVDFAKALAKSLGVK---LELVATNPANRIPLLQSGKADLIVADITITPER--AQVID 119 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + GQ F++ K + S A I GTT E L F + + ++ Sbjct: 120 FSTPYFVTGQQFLVPAKSP-DKLDDYSRARIGAVKGTTGEQALHQRFP----QSRVLSYD 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + A R A T D + L L ++ ILPD++SK + + +G+T Sbjct: 175 DIPLALTALRNGNVQAITQDSTILAGLLAQAPDKADFKILPDLLSKEEIGVGVKKGETAL 234 Query: 238 YNIVSWTH 245 V+ Sbjct: 235 LRAVNDEL 242 >gi|239503575|ref|ZP_04662885.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii AB900] gi|260555371|ref|ZP_05827592.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii ATCC 19606] gi|260411913|gb|EEX05210.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii ATCC 19606] Length = 288 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 50/224 (22%), Positives = 100/224 (44%), Gaps = 8/224 (3%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + S + IKK G ++ G+ + F + A G +GFDV+ + ++ + D +K++ Sbjct: 38 TTQTTSSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVE 97 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++ A R L++ ++DI+ N T R+ + F G + K I+ Sbjct: 98 FVLTEAANRVEYLKANKVDIIFANFTVTPERKEV--VDFAKPYLKVALGVVSPKSHPITD 155 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V+QL ++ V GTT + +F + + +E+ E A + R A D Sbjct: 156 VAQLKDKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGAALAHDNL 211 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + A + P+ V + ++ + +APA+ +GD E + ++ Sbjct: 212 LVLAWA--KENPNYTVGITNLGEQDLIAPAVKKGDKELLDWLNQ 253 >gi|111020580|ref|YP_703552.1| glutamate binding protein solute binding protein family [Rhodococcus jostii RHA1] gi|110820110|gb|ABG95394.1| probable glutamate binding protein, bacterial solute binding protein family protein [Rhodococcus jostii RHA1] Length = 336 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 98/239 (41%), Gaps = 13/239 (5%) Query: 11 CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRA 66 L L + S L +I RG L GI+ F+ G GFDVD Sbjct: 74 ALASLRPAATPDVRAPGSSLAEITARGRLIVGIDQNTNLFSFRDPTTGMLMGFDVDVAGE 133 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ +F DPS++++ L + +RF ALQ++ +D++ ++T T R S +AF + + Sbjct: 134 MARDLFGDPSRVEFRLLTSGDRFDALQNEDVDLVVKSTSITCER--SERVAFSTVYFQAY 191 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 Q ++ K GIS + L+G +C TT+ T+ + ++ Sbjct: 192 QRLLVPKGSGISGPADLAGKRVCTAGDTTSLDTVRRVQPEA----TIVAVPDWDDCLVVL 247 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + DA + D S L L + I+ + P + + + V+ T Sbjct: 248 QQRQADAASTDDSILAGLAAQDPN---LEIVGPPLESEPYGIGVNKNHDDLVRFVNGTL 303 >gi|319763771|ref|YP_004127708.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|330823965|ref|YP_004387268.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans K601] gi|317118332|gb|ADV00821.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|329309337|gb|AEB83752.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus denitrificans K601] Length = 296 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 98/248 (39%), Gaps = 4/248 (1%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 + +L + + L +K G + G+ + + + + G+ V+ C + Sbjct: 9 GAVLATLLHLPAIAQPQGTLEKVKASGAIVLGVREASAPLSYLLGSSQYVGYHVELCERI 68 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + +F ++Y + ++ R +Q+ +D+ +T T R+ + F TY Sbjct: 69 AKNLFPQAQ-VRYQAVTSQNRMPLVQNGTVDLECGSTSNTASRKE--QVDFANTTYITEA 125 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + + K GI S QL+G +I GTT L + +K++ ++ + E Sbjct: 126 RYAVKKSSGIESTGQLAGKTIVTTTGTTLVPRLRKLERE-GLKFNLVMAKDHAESMLMVA 184 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 R DA+ D + L P + I+ + + P+A + + D + V Sbjct: 185 QGRADAFAMDDNTLAGNIAMLQNPQDFRIVGTPLGREPIALMLRRNDAAFKQAVDAEISK 244 Query: 248 MVTAEELG 255 ++ + EL Sbjct: 245 LIRSGELR 252 >gi|210135331|ref|YP_002301770.1| glutamine ABC transporter periplasmic glutamine-binding protein [Helicobacter pylori P12] gi|210133299|gb|ACJ08290.1| glutamine ABC transporter periplasmic glutamine-binding protein [Helicobacter pylori P12] Length = 277 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 8 KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 68 DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G + K I ++ +L + V GTT + F + + FE+ Sbjct: 126 KPYMKVALGVVS-KDGVIKNIEELKNKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A ++ A D + L A P + + + K +APAI +G+ + Sbjct: 181 TETFLALLNNKATALAHDNTLLLAWAKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238 Query: 240 IVSWTHYAMVTAEELG 255 ++ ++++++ L Sbjct: 239 WLNNEMDSLISSDFLK 254 >gi|308063955|gb|ADO05842.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori Sat464] Length = 277 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 8 KVWGLFLVLIALAFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 68 DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTHTKEREKV--VDFA 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G I K I ++ +L + V GTT + F + + FE+ Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELENKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A ++ A D + L A P + + + K +APAI +G+ + Sbjct: 181 TETFLALLNNKAIALAHDNTLLLAWIKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238 Query: 240 IVSWTHYAMVTAEELG 255 + ++++++ L Sbjct: 239 WLDNEMDSLISSDFLK 254 >gi|160898239|ref|YP_001563821.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160363823|gb|ABX35436.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 305 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 93/238 (39%), Gaps = 6/238 (2%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSK 77 ++ L I++ G + G GF+ + + G+ +D CR + + + + Sbjct: 32 QDSGTLAKIQQAGAITLGYRESSFGFSYLDGDLKPVGYSMDICRRIVDEIKAQLKLPALQ 91 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++Y + + R + + +D+ +T + R+ + F P + ++ G+ Sbjct: 92 VRYQAVTSANRIPLVANGTVDLECGSTTNLVERQKQVA--FSPDIFRYNVRMLVRADSGL 149 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 SV+ L G ++ AGTT+ L + + N+ + + + + R A+ D Sbjct: 150 RSVADLQGKTVATTAGTTSFRLLREADRGRNLDITNLSGKDHSDSFMLVESGRAQAFVLD 209 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L P +++I + + A + + D + IV M+ + E+ Sbjct: 210 DILLAGQIANAKNPQDYLITGESLRTENQALMLRKDDAGFKAIVDRVVTGMMQSGEME 267 >gi|134280643|ref|ZP_01767353.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 305] gi|134247665|gb|EBA47749.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 305] Length = 299 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 86/261 (32%), Gaps = 8/261 (3%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + L I+ + G+ V F+ G Sbjct: 2 MKPLRPLLSIAVGCALAAAAHADDAGPTLKKIRDTRVVTLGVRESSVPFSYYDQQQRTIG 61 Query: 59 FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + + + I ++ +P+ ++ R +Q+ +D+ +T T R + Sbjct: 62 YSQEIALKIVDEIKKTLNRPNLTVREIPITSQNRIPLVQNGTVDLECGSTTHTKER--AN 119 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 ++F + G I+ K G+ L+G ++ AGTT E L + M I Sbjct: 120 QVSFSNSIFQYGMRLIVKKSSGVKDFPDLAGKTVATTAGTTEERLLRQWNAEKGMAMQII 179 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ R A+ D LY K P ++VI + + + D Sbjct: 180 SAKDHADAFLNVKSGRAVAFFMDEPLLYGAKAKEANPGDYVITGNSPVSEAYGCMLRKDD 239 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + + M + E Sbjct: 240 PGFKQLADRVIARMQRSGEAE 260 >gi|116629031|ref|YP_814203.1| amino acid ABC transporter periplasmic protein [Lactobacillus gasseri ATCC 33323] gi|311111174|ref|ZP_07712571.1| amino acid ABC transporter, amino acid-binding protein [Lactobacillus gasseri MV-22] gi|116094613|gb|ABJ59765.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus gasseri ATCC 33323] gi|311066328|gb|EFQ46668.1| amino acid ABC transporter, amino acid-binding protein [Lactobacillus gasseri MV-22] Length = 263 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 85/246 (34%), Gaps = 6/246 (2%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 + + AS IK+RG L G++ V + NG GFDVD A+ Sbjct: 15 VITSVGLAGCQRQASSWQKIKERGTLVIGVDDSFVPMDFRQKNGKLVGFDVDLATAVCKE 74 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 I P + ++ + L++ ID++ T R +AF + Q + Sbjct: 75 IGLKPD---FQTIDWSMKETELRNGTIDVIWNGYTKTKARAK--KVAFSRPYLENDQILV 129 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-PIVFERVEEIDAAYRAH 189 KK+ I++ Q+ G + VQ G++ L +Y + ++++ +A Sbjct: 130 TRKKEQINNYCQMKGRILGVQTGSSGADDLDNYPNVLKKRVKSTVLYDTYNNAFIDLKAG 189 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R D D + E + I + D + ++ + Sbjct: 190 RIDGLLIDGVYANYYLAHSKYQKEFKKEKLPYPSEKFSVGINKKDQILKDKINQALDHLE 249 Query: 250 TAEELG 255 EL Sbjct: 250 KTGELE 255 >gi|317009782|gb|ADU80362.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori India7] Length = 277 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 8 KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 68 DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G + K I ++ +L + V GTT + F + + FE+ Sbjct: 126 KPYMKVALGVVS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A ++ A D + L A T P + + + K +APAI +G+ + Sbjct: 181 TETFLALLNNKATALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238 Query: 240 IVSWTHYAMVTAEELG 255 ++ ++++++ L Sbjct: 239 WLNNEIDSLISSDFLK 254 >gi|317014559|gb|ADU81995.1| amino acid ABC transporter [Helicobacter pylori Gambia94/24] Length = 277 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G+++G+ Sbjct: 8 KMWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGNYQGY 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 68 DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREAV--VDFA 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G I K I ++ +L + V GTT + F + + FE+ Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A ++ A D + L A P + + + K +APAI +G+ + Sbjct: 181 TETFLALLNNKAIALAHDNTLLLAW--VKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238 Query: 240 IVSWTHYAMVTAEELG 255 ++ ++++++ L Sbjct: 239 WLNNEIDSLISSDFLK 254 >gi|225374847|ref|ZP_03752068.1| hypothetical protein ROSEINA2194_00470 [Roseburia inulinivorans DSM 16841] gi|225213308|gb|EEG95662.1| hypothetical protein ROSEINA2194_00470 [Roseburia inulinivorans DSM 16841] Length = 267 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 88/254 (34%), Gaps = 12/254 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGDWKG 58 M K + ++ + L T+ + + G G + F V +G++ G Sbjct: 1 MKKFMALLLVAGMTLSLTACGGSTDTAKTDQADGKDTFTVGFDQDFPPFGYVGDDGEFTG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD++ ++ + I P++ + + L++ ID + + + Sbjct: 61 FDIEMATECAARMGKK---IVLQPIDWDAKDMELEAGTIDCIWNGFTMNGRED---QYTW 114 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVF 176 + Q ++ K GI++++ L+G + VQ + E L D A M + Sbjct: 115 TDPYMDNSQVVVVKKDSGINTLADLAGKVVEVQKESAAETALNDEEHADLMASFAQLLSV 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + DA D A + ++ IL + IS A G+T Sbjct: 175 GEYNTAFMDLESGAVDAVAID--IGVAQFQIEGKEDQYQILDETISSEQYAVGFFLGNTA 232 Query: 237 WYNIVSWTHYAMVT 250 + V T MV Sbjct: 233 LRDEVQSTLLEMVE 246 >gi|295677112|ref|YP_003605636.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295436955|gb|ADG16125.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 329 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 86/251 (34%), Gaps = 9/251 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M++ C ++ F + L I G + G+ + F+ G Sbjct: 33 MHRVLLALTACGVVAFAGPARADELTGTLKKIHDDGVVVLGVREASIPFSYFDGK-RTVG 91 Query: 59 FDVDFCRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + + + ++ + + + R L + QID+ +T T+ RE Sbjct: 92 YSQAIAMQIVDEIRKTLGMTQLRVHEITVTSSNRTPMLLNNQIDLECGSTTHTVERE--N 149 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 AF + I K GI+ L+G + AGT+ E L + + Sbjct: 150 VAAFSDSFFQYAVRMITRKNSGITDFRDLAGKPVVTTAGTSDERLLRSLNTEKQLNMRIM 209 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +E +A + R A+ D +Y K T+ P + ++ + A +GD Sbjct: 210 SARDHQEAFSAMKDGRAVAFVMDEPIVYGFKATDPHPDDFIVTGTPLGYEVYACMFRKGD 269 Query: 235 TEWYNIVSWTH 245 + +V+ Sbjct: 270 ESFRALVNRVI 280 >gi|299066140|emb|CBJ37323.1| putative amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum CMR15] Length = 284 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 100/251 (39%), Gaps = 12/251 (4%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDF 63 + + + A L D+KK+G L CG+ F+ +K + + G+DVD Sbjct: 13 LACAAIVAAVTLAAVPAKADQLADVKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDM 72 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 C A++ ++ P L R LQ ++D+L+ + RE + F T+ Sbjct: 73 CHAVAKSLGVKP---VLKQLAVAARIPELQQGRVDLLAASLTHNKEREA--QIDFSLSTF 127 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 GQ ++ K GI+S++QL G + G+T E + K + F+ + Sbjct: 128 VTGQKAMVRKDSGITSLAQLDGKKVLTVKGSTMEANIGKAIK----NADIVSFDNSPQAL 183 Query: 184 AAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + + AY D + L ++ +LP +S A + + + + V+ Sbjct: 184 LALQQGKGAAYVNDETTLVGNMAKLGAASRDYALLPQNLSTEHFALGLRKNEPAFREQVN 243 Query: 243 WTHYAMVTAEE 253 + + E Sbjct: 244 KVLRGLEASGE 254 >gi|311069226|ref|YP_003974149.1| glutamine ABC transporter glutamine-binding lipoprotein [Bacillus atrophaeus 1942] gi|310869743|gb|ADP33218.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus atrophaeus 1942] Length = 275 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 94/233 (40%), Gaps = 11/233 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDD 74 + + + L IK + G+ T F + GD +GFD+D + L+ I D Sbjct: 30 SSGTSKDSKNTLEAIKDNDKIVFGVKTDTRLFGLKNPSSGDIEGFDIDIAKQLAKDIAGD 89 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +K ++ + +K R LQ+ ID + T R+ + F + + GQ ++ K Sbjct: 90 ENKAEFKEVTSKTRIPMLQNGDIDAIVATMTITDERKK--EVDFSNVYFEAGQSLLVKKG 147 Query: 135 KGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I SV L G + G+T+ + + + FE E A ++ + +A Sbjct: 148 SAIKSVKDLKKGTKVLAVKGSTSSQNIREKAP----NATVLEFENYAEAFTALKSGQGEA 203 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 T D + LY + N ++ + + P A+ +G +E ++ + Sbjct: 204 LTTDNAILYGMADENK---DYQLTGKTFTDEPYGIAVKKGQSELVKEINASLK 253 >gi|238752607|ref|ZP_04614080.1| Glutamate/aspartate periplasmic-binding protein [Yersinia rohdei ATCC 43380] gi|238709198|gb|EEQ01443.1| Glutamate/aspartate periplasmic-binding protein [Yersinia rohdei ATCC 43380] Length = 311 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 80/224 (35%), Gaps = 6/224 (2%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYL 81 L IK G + G V F+ G+ D+ + AI +++ + Sbjct: 41 TLKKIKDNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIKKKLNAPDLQVKLI 100 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ ++ R LQ+ D +T L R+ F + G + K I Sbjct: 101 PITSQNRIPLLQNGTFDFECGSTTNNLERQKQAA--FSNTIFVVGTRLLTKKDSNIKDFK 158 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+ ++ V +GTT+E+ L + M I + + + R A+ D + L Sbjct: 159 DLADKAVVVTSGTTSEVLLNKLNEKDKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALL 218 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + +P + I+ S+ + + D + ++ T Sbjct: 219 AGERAKAKKPDQWEIVGIPQSQEAYGCMLRKDDPAFKALLDETI 262 >gi|116326670|ref|YP_796444.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei ATCC 334] gi|116106488|gb|ABJ71629.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus casei ATCC 334] Length = 284 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 64/261 (24%), Positives = 105/261 (40%), Gaps = 26/261 (9%) Query: 1 MYKDFF------VSILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGLV 45 M K F VS+ ++L T + + IKK G ++ + L Sbjct: 1 MKKRLFTRIIAVVSVFAALLLVLTGCGNSKKSSSQSNNPSSVQQIKKNGTIRIAVFGDLP 60 Query: 46 GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 + V +G G+DV ++ + ++++ +NA R AL S ++D++ N Sbjct: 61 PYGWVNKDGKRVGYDVTLAHQVAKDLGVK---VKFVQVNANNRVDALNSNKVDLVLANFT 117 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 T R + F G + K K I+ SQL G ++ V GTT E +YF Sbjct: 118 VTPER--KQVIDFAKPYMKVSVGVVSPKNKAITKASQLKGKNVIVTKGTTAE----NYFT 171 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 + + F+ + A + R A D S LYA + D PS V + I KS Sbjct: 172 SKQPDVKLLKFDSKTQQFNALKNGRGVALADDNSYLYAW--SKDNPSYTVGIKSIGPKSY 229 Query: 226 LAPAIIQGDTEWYNIVSWTHY 246 +APA+ +G+ N + Sbjct: 230 IAPAVKKGNKSLLNWTNKEIN 250 >gi|134295676|ref|YP_001119411.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134138833|gb|ABO54576.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia vietnamiensis G4] Length = 276 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 62/249 (24%), Positives = 91/249 (36%), Gaps = 11/249 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + L L +A L DIKK G L+ F V A G Sbjct: 6 MKFHTLATWLVGAALVTAGTLAHADRLDDIKKAGVLRVATFDSNPPFGFVDAKSHHIVGL 65 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + +Q P N R L S ++D++ N T R + F Sbjct: 66 DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 120 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F+ K + S QL+G + GTT E+TL D F + ++ Sbjct: 121 IPYFSSGQQFLAKKG-VLKSADQLNGLRVGADKGTTNEITLRDKFP----GATIVAYDDT 175 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I IS + + +G+ Sbjct: 176 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGEARLLG 235 Query: 240 IVSWTHYAM 248 V+ T + Sbjct: 236 FVNDTLKGL 244 >gi|327399612|ref|YP_004340481.1| ABC transporter periplasmic subunit family 3 [Hippea maritima DSM 10411] gi|327182241|gb|AEA34422.1| ABC-type transporter, periplasmic subunit family 3 [Hippea maritima DSM 10411] Length = 275 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 59/255 (23%), Positives = 100/255 (39%), Gaps = 18/255 (7%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNA-------SILGDIKKRGFLKCGINTGLVGFAEVKA 52 M + F F+ + + + + S A S L I+KRG L+ G+N G + F Sbjct: 1 MKRLFGFLVFVVSLFMLVSFTSRAADINLWHNSTLYKIQKRGVLRVGLNAGYMPFEMRSK 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G GFDVD + ++ A+ ++ + + AL + + DI+ T R Sbjct: 61 TGKIIGFDVDMAKLMAKAMGVK---LKIVNTDWDGIIPALMTNKFDIIMSGMTITQKR-- 115 Query: 113 SLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 +L + F GQ +++KK I S L+ V T A K + K Sbjct: 116 NLKVNFADPYIVVGQTVLVNKKWAGKIKSYKDLNDPKFTVTVMLGTTGDFA--AKKYISK 173 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 F+ EE R DA+ D ++ +N + + L + PL AI Sbjct: 174 AKIQEFQTEEEAVMQVMQGRADAFVYDKP-YESIFYSNKGKGKLIFLDKPFTYEPLGWAI 232 Query: 231 IQGDTEWYNIVSWTH 245 +GD ++ N ++ Sbjct: 233 NKGDPDFLNWLNNFL 247 >gi|42518674|ref|NP_964604.1| glutamine ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] gi|41582960|gb|AAS08570.1| glutamine ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] Length = 273 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 95/250 (38%), Gaps = 14/250 (5%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M + FF + L +F S ++ ++KK + G+ F + G Sbjct: 1 MKRKLRFFSLFIVLFSVFLLSACQKNTRNVYQEVKKSNEITWGVKADTRLFGLMSIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GF+VD AL+ I +K ++ AK + L++ ID + T R+ Sbjct: 61 IEGFEVDLANALTKEILGKNAKANFVQTTAKTKIPLLKNGNIDAVLAAMTITPERKK--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F ++ GQ ++ I S+ ++G + GTT + + + Sbjct: 119 IDFSDPYFYAGQSLLVKDDSTIKSIKDMNGKTALAVKGTTAVANVKKFAPKAK----VLE 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + A +A + A T D L + N + ++ +K P A+ +G Sbjct: 175 FDDYGQAFTALKAGQGQAMTTDNGLLAGIATENKG---YKLVGGTYTKEPYGIAVNKGQI 231 Query: 236 EWYNIVSWTH 245 + N ++ Sbjct: 232 QMKNAINRAL 241 >gi|170702190|ref|ZP_02893096.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170132899|gb|EDT01321.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 278 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 90/249 (36%), Gaps = 11/249 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + L L +A L DIKK G L+ F V G Sbjct: 8 MKFHTLATWLVGAALVTAGTVAHADRLDDIKKAGVLRVATFDSNPPFGYVDGKSNHIVGL 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + +Q P N R L S ++D++ N T R + F Sbjct: 68 DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 122 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F+ K + S QL+ + GTT E+TL + + + ++ Sbjct: 123 IPYFSSGQQFLAKKG-VLKSADQLNSLRVGADKGTTNEITLREKYPKA----TIVAYDDT 177 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I IS + + +G+T Sbjct: 178 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 237 Query: 240 IVSWTHYAM 248 V+ T + Sbjct: 238 FVNDTLKGL 246 >gi|208435066|ref|YP_002266732.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori G27] gi|208432995|gb|ACI27866.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori G27] Length = 277 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 8 KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGY 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 68 DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G I K I ++ +L + V GTT + F + + FE+ Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A ++ A D + L A P + + + K +APAI +G+ + Sbjct: 181 TETFLALLNNKATALAHDNTLLLAWAKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238 Query: 240 IVSWTHYAMVTAEELG 255 ++ ++++++ L Sbjct: 239 WLNNEIDSLISSDFLK 254 >gi|324993850|gb|EGC25769.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK405] gi|324994829|gb|EGC26742.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK678] gi|325687270|gb|EGD29292.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK72] Length = 270 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 102/259 (39%), Gaps = 11/259 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72 + + S+ + + I+KRG L G+ + F + + + G ++D + ++ + Sbjct: 22 AVPAQADSSTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG 81 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 I Y+P+ A+ R L + Q+D++ T R+ F P Y D GF+++ Sbjct: 82 VK---INYVPVTAQTRGPLLDNGQVDMVIATFTITDERKEI--YNFTPPYYTDASGFLVN 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K I+ V L+ +I V G+ T+ L + + + + + E+ + RAHR D Sbjct: 137 KSSKITDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRID 196 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A + D S L + IL K+ + +T+ + V Sbjct: 197 AISVDKSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKWKEDG 251 Query: 253 ELGITQKNINQVSKDTTNP 271 L + +T+ Sbjct: 252 SLQKIYDKYDLKPSASTDD 270 >gi|241661990|ref|YP_002980350.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|240864017|gb|ACS61678.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 302 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 90/248 (36%), Gaps = 13/248 (5%) Query: 16 FFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----S 69 F ++ L IK G + G+ + F+ G+ D ++ Sbjct: 20 FGSAAHAEELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIGYSYDVATKIAEDVKK 79 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + K+ +P+ ++ R LQ+ ID+ +T L R+ +F + G Sbjct: 80 QLGLKDLKVNEIPVTSQNRITLLQNGTIDLECGSTTNNLERQK--QASFTNTIFIIGTRI 137 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ K G+ + L G ++ AGTT+E L M + I + + + Sbjct: 138 MVKKDSGVKDWADLKGKNVVTTAGTTSERLLRKMNDEKQMGMNIISTKDHGQSFLTLESG 197 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH---- 245 R A+ D + LY + P++ V++ S+ + + D + + T Sbjct: 198 RAVAFMMDDALLYGERAKAKNPADWVVVAKPQSREAYGCMVRKDDKPFKALADKTIAGMM 257 Query: 246 -YAMVTAE 252 + AE Sbjct: 258 KDGTINAE 265 >gi|94309344|ref|YP_582554.1| extracellular solute-binding protein [Cupriavidus metallidurans CH34] gi|93353196|gb|ABF07285.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Cupriavidus metallidurans CH34] gi|222871736|gb|EEF08867.1| predicted protein [Populus trichocarpa] Length = 299 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 92/252 (36%), Gaps = 8/252 (3%) Query: 4 DFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 ++ +L + + L IK G + G+ + F G+ Sbjct: 5 KLAGLMIAAGVLCGNAQAAEQLTGTLQKIKDTGVITLGVRDSSIPFNYNLGGVRQVGYSY 64 Query: 62 DF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D A+ + +++ +P+ ++ R LQ+ IDI +T L R+ ++ Sbjct: 65 DINMKIVEAIKDQLKLPNLQVKEIPITSQNRITLLQNGTIDIECGSTTNNLERQK--QVS 122 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + G ++ K GI + L G ++ AGTT+E L + + I + Sbjct: 123 FTDTIFIIGTRIMVKKDGGIKDWADLKGKNVVTTAGTTSERLLRKMNDDQKLGMNIISTK 182 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R A+ D + LY + P++ +++ S+ I + D + Sbjct: 183 DHGQSFLTLESGRAVAFMMDDALLYGERAKAKNPNDWIVVGKPQSREAYGCMIRKDDAPF 242 Query: 238 YNIVSWTHYAMV 249 + ++ Sbjct: 243 KKVSDQVIAGLM 254 >gi|317053314|ref|YP_004119081.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] gi|316953053|gb|ADU72525.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 275 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 94/248 (37%), Gaps = 13/248 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFD 60 K+ + ++ S + +A L DIK G +K F + A + G+D Sbjct: 9 KKNILT--IAVLATLLVSAAASADQLADIKAAGVIKVATFDANPPFGSIDAKSHELVGYD 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF +AL++++ ++ + N R LQS + D++ + T R + + F Sbjct: 67 VDFAKALANSLGVK---LKLVATNPANRIPLLQSGKADLIVADITITPER--AQVIDFST 121 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + GQ F++ + + S A I GTT E L + + ++ + Sbjct: 122 PYFVTGQQFLVPATSPDQ-LDKYSHARIGAVKGTTGEQALHQRYPQA----RVLAYDDIP 176 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A R A T D + L L ILP ++SK + + + Sbjct: 177 LALTALRNGNVQAITQDSTILAGLLAAAPDKENFKILPALLSKEEIGVGVKKDQPALLQA 236 Query: 241 VSWTHYAM 248 V+ A+ Sbjct: 237 VNDELLAL 244 >gi|308513289|ref|NP_951857.2| amino acid ABC transporter periplasmic amino acid-binding protein [Geobacter sulfurreducens PCA] gi|41152668|gb|AAR34130.2| amino acid ABC transporter, periplasmic amino acid-binding protein [Geobacter sulfurreducens PCA] gi|298504920|gb|ADI83643.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Geobacter sulfurreducens KN400] Length = 263 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 79/246 (32%), Gaps = 11/246 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L++ F + +K G L G++ A+G GFD Sbjct: 1 MKKLVLLMVSALLVAFAATAFAADGSWNRVKSAGKLVIGLDDAFPPMGYRDASGKLIGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + KI++ P +L SK+ D + T R + F Sbjct: 61 IDAAEEVGKRLG---IKIEWQPTAWDGVIHSLNSKKFDAIWNGMTITDERAKQVA--FTK 115 Query: 121 ITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 D + +K ++ L I Q G++ + A +E Sbjct: 116 PYIMDGQIAVVKFSEKRFKKIADLKNVKIGAQKGSSALNAVKKLPTA---PAELKEYEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A R D D RP + ++P ISK P A + D E Sbjct: 173 PKALLDLEAGRIDVVVIDNVT--GRDFIAKRPGQFKVVPGFISKEPFGVAFRKEDKELRE 230 Query: 240 IVSWTH 245 V T Sbjct: 231 KVQKTL 236 >gi|300782280|ref|YP_003762571.1| ABC transporter substrate-binding protein [Amycolatopsis mediterranei U32] gi|299791794|gb|ADJ42169.1| ABC transport system substrate-binding protein [Amycolatopsis mediterranei U32] Length = 314 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 99/239 (41%), Gaps = 11/239 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRAL 67 + L+ ++ ++S + DI+KRG L G++ F +G+ +GFD+D A+ Sbjct: 53 LASLVPASSSTTVPDSSTMSDIRKRGKLIAGVDQTTYLFGFRNPTSGNLEGFDIDMVNAV 112 Query: 68 SSAIFDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + AIF +Q+ + + +R L+ Q+DI+ R T R+ + F + Y G Sbjct: 113 AKAIFGSADGHVQFRAIPSSQREEVLKKHQVDIVVRTYSITCARKK--DVEFSSVYYVAG 170 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 Q ++ K+ +S LSG +C +T+ +A P+ + + Sbjct: 171 QKILVPKESKAQKLSDLSGKRVCATKKSTSLAKIATDAAK----PVPVSVDNWSDCLVML 226 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + DA + D + L + + + + +++ + + + V+ Sbjct: 227 QQGQVDAVSTDDTILAGMAAQDS---TLEVRGEPLTQENYGIGVPKDRPDLVRYVNAVL 282 >gi|238853598|ref|ZP_04643967.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus gasseri 202-4] gi|238833742|gb|EEQ26010.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus gasseri 202-4] Length = 263 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 85/246 (34%), Gaps = 6/246 (2%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 + + AS IK+RG L G++ V + NG GFDVD A+ Sbjct: 15 VITSVGLAGCQRQASSWQKIKERGTLVIGVDDSFVPMDFRQKNGKLVGFDVDLATAVCKE 74 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 I P + ++ + L++ ID++ T R +AF + Q + Sbjct: 75 IGLKPD---FQTIDWSMKETELRNGTIDVIWNGYTKTKARAK--KVAFSRPYLENDQILV 129 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFERVEEIDAAYRAH 189 KK+ I+S Q+ G + VQ G++ L +Y + ++++ +A Sbjct: 130 TRKKEQINSYRQMKGRILGVQTGSSGADDLDNYPNVLKKRVKSAVLYDTYNNAFIDLKAG 189 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R D D + E + I + D + ++ + Sbjct: 190 RIDGLLIDGVYANYYLAHSKYQKEFKKEKLPYPSEKFSVGINKKDQILKDKINQALDHLE 249 Query: 250 TAEELG 255 EL Sbjct: 250 KTGELE 255 >gi|300690821|ref|YP_003751816.1| glutamate/aspartate ABC transporter,periplasmic binding subunit [Ralstonia solanacearum PSI07] gi|299077881|emb|CBJ50520.1| glutamate/aspartate ABC transporter,periplasmic binding subunit [Ralstonia solanacearum PSI07] Length = 308 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 38/243 (15%), Positives = 88/243 (36%), Gaps = 8/243 (3%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAI 71 + + + L I++ G + G + F+ ++G+ G+ + + + Sbjct: 26 STGAQAQSNDTLAKIRQSGVISVGYRESSIPFSYEASSGNITGYSQEISNLIIDGVKKKL 85 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 +++ P+ ++ R LQ+ ID +T L R+ + F + G ++ Sbjct: 86 GLPSLQVKLTPITSQNRIPLLQNGTIDFECGSTTNNLERQKQVA--FSNNIFIYGMLMLV 143 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERVEEIDAAYRAH 189 K GI L G ++ AGTT + L K + I+ + + + Sbjct: 144 KKDGGIKDFPDLKGKTVVTTAGTTEDRILQKMNGEAKDADKMNLILAKDHGQAFLTLESG 203 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R A+ D LY + + +++ + A + + D + + ++ Sbjct: 204 RAVAFVMDEPLLYGERTKAKNQDDWIVVGKPLQTETYACMMRKDDPAFKKVADDVIADLM 263 Query: 250 TAE 252 T+ Sbjct: 264 TSG 266 >gi|206896514|ref|YP_002246907.1| glutamine-binding protein [Coprothermobacter proteolyticus DSM 5265] gi|206739131|gb|ACI18209.1| glutamine-binding protein [Coprothermobacter proteolyticus DSM 5265] Length = 254 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 87/246 (35%), Gaps = 19/246 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F + ++ IL S +A+ L G + NG++ GFD Sbjct: 1 MKRTFVLLLVVGAILLGCSSQQSANT---------LVVGTAADFPPLEFIDENGNFAGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ A++ I + +++ + +LQ+ + D + T R + F Sbjct: 52 IELMNAIAEKIGYE---VKWENADFAGLVASLQTGKYDAVISAMTITASR--QEEVDFSR 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ + I S L+ +I VQ GTT EL + +E Sbjct: 107 PYFRSDQAVVVQESNVGILSREDLADKTIGVQLGTTGELLARELVSDKGG---VYTYESP 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ R DA D+ L N + I ++ A+ +G+TE Sbjct: 164 DQAFLDLNTGRLDAVVNDLPVSSYFLLRNPNLP-LKVAFTIETEEYYGIAVKKGNTELVE 222 Query: 240 IVSWTH 245 ++ Sbjct: 223 KINNAL 228 >gi|290963272|ref|YP_003494454.1| amino acid ABC transporter substrate-binding protein [Streptomyces scabiei 87.22] gi|260652798|emb|CBG75931.1| putative amino acid ABC transporter solute-binding protein [Streptomyces scabiei 87.22] Length = 274 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 88/251 (35%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSIL--CLIILFFTSFSTNASILGDIK---KRGFLKCGINTGLVGFAEVKANGD 55 M K + L +++L ++ +++ + KR L G+ G G Sbjct: 1 MSKRLISAALTSAIVVLSASACTSSDDTGSSVLDAAKRDKLVIGVKADQPGLGLRTPEGT 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D ++ + D I + + R LQ Q+D++ R+ Sbjct: 61 FTGFDIDVATYVAKELGVDKKDITFKEAVSANREAFLQQGQVDMVVATYSINDARKE--K 118 Query: 116 LAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 ++F GQ ++ K I+ L+G +C AG+T+ + + + Sbjct: 119 VSFAGPYLVAGQDLLVRKDNKDITGPESLNGKKLCSVAGSTSAQLIKEKYAE---DAQLQ 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + DA T D S LY P + +L S+ + + D Sbjct: 176 EERTYSACVDRVLSGQLDAVTTDNSILYGYAAQ--HPGKLKVLDSPFSQENYGIGLKKDD 233 Query: 235 TEWYNIVSWTH 245 + V+ Sbjct: 234 KKGREAVNDAL 244 >gi|166367483|ref|YP_001659756.1| extracellular solute-binding protein [Microcystis aeruginosa NIES-843] gi|166089856|dbj|BAG04564.1| extracellular solute-binding protein [Microcystis aeruginosa NIES-843] Length = 299 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 99/256 (38%), Gaps = 11/256 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + V + + + ++ S+ A + I+K G + G + F V + G W G+ Sbjct: 1 MKRTLAVMTMTVALTLTSNHSSLAGAIFDRIQKTGVITAGARKDAIPFGFVNSQGKWVGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D + P K++ + + + RF L++ IDI +T +T RE + Sbjct: 61 SLDMLELIRKETERKLGKPIKLKIVEITPQNRFEKLKTGVIDIECGSTTFTWKRE--NEV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G + K + + L+G I V A TT E + A + Sbjct: 119 DFSVSYFAGGTQLLTRKGSNLDDIGSLAGRRIGVIANTTNEAVIKTQQPAA----ILVKV 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235 + E A D + D L L+ + P+ I+P + A + + D+ Sbjct: 175 KNRGEGLQKLEAGEIDGFASDGITLEGLRKSAKNPNNLAIVPSYPYAYESYACTLPENDS 234 Query: 236 EWYNIVSWTHYAMVTA 251 +W + V++T + Sbjct: 235 KWRDTVNYTLLKFMEG 250 >gi|227890386|ref|ZP_04008191.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] gi|227849200|gb|EEJ59286.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] Length = 273 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 95/250 (38%), Gaps = 14/250 (5%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M + FF + L +F S ++ ++KK + G+ F + G Sbjct: 1 MKRKLRFFSLFIVLFSVFLLSACQKNTRNVYQEVKKSNEITWGVKADTRLFGLMSIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GF+VD AL+ I +K ++ AK + L++ ID + T R+ Sbjct: 61 IEGFEVDLANALTKEILGKNAKANFVQTTAKTKIPLLKNGNIDAVLAAMTITPERKK--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F ++ GQ ++ I S+ ++G + GTT + + + Sbjct: 119 IDFSDPYFYAGQSLLVKDDSTIKSIKDMNGKTALAVKGTTAVANVKKFAPKAK----VLE 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + A +A + A T D L + N + ++ + P A+ +G T Sbjct: 175 FDDYGQAFTALKAGQGQAMTTDNGLLAGIATENKG---YKLVGGTYTNEPYGIAVNKGQT 231 Query: 236 EWYNIVSWTH 245 + N ++ Sbjct: 232 QMRNAINRAL 241 >gi|300690825|ref|YP_003751820.1| amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum PSI07] gi|299077885|emb|CBJ50524.1| putative amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum PSI07] Length = 285 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 99/251 (39%), Gaps = 12/251 (4%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDF 63 + + + A L DIKK+G L CG+ F+ +K + + G+DVD Sbjct: 14 LACAAIVAAVTLAAVPAKADQLADIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDM 73 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 C A++ + P L R LQ ++D+L+ + RE + F T+ Sbjct: 74 CNAVAKRLGVKP---VLKQLAVAARIPELQQGRVDLLAASLTHNKEREA--QIDFSVSTF 128 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 GQ ++ K GI+S++QL G + G+T E +A K + F+ + Sbjct: 129 ITGQKAMVRKDSGITSLAQLDGKKVLTVKGSTMEANIAKTVK----NADIVSFDNSPQAL 184 Query: 184 AAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + + AY D + L ++ I+ +S LA + + + V+ Sbjct: 185 LALQQGKGAAYVNDETTLVGNMAKLGAASRDYAIVAQNLSTEHLALGLRKNEPALREQVN 244 Query: 243 WTHYAMVTAEE 253 + + E Sbjct: 245 KVLLDLEASGE 255 >gi|22536881|ref|NP_687732.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 2603V/R] gi|76788013|ref|YP_329465.1| polar amino acid ABC transporter amino acid-binding protein [Streptococcus agalactiae A909] gi|76798186|ref|ZP_00780437.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 18RS21] gi|22533731|gb|AAM99604.1|AE014224_7 amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 2603V/R] gi|76563070|gb|ABA45654.1| polar amino acid uptake (PAAT) family ABC transporter, amino acid-binding protein [Streptococcus agalactiae A909] gi|76586449|gb|EAO62956.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 18RS21] Length = 266 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 62/249 (24%), Positives = 106/249 (42%), Gaps = 12/249 (4%) Query: 2 YKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 + F + C+ I L F ST+A+ L +IKK G LK G+ + F A ++G Sbjct: 5 KRLTFYLLSCIFIFLLFYPNSTSANQLSEIKKSGVLKVGVKQDVPNFGYYNAETNQYEGM 64 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D + ++ ++ P ++P A+ R + + QIDIL T R+ + + Sbjct: 65 EIDIAKKIAKSLGVKP---VFVPTTAQTREPLMDNGQIDILIATYTITPERKANYNI--S 119 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y D GF++ K I ++ +L G I V G TT++ L Y K H +K+ Sbjct: 120 KAYYHDEIGFLVRKNSHIKTIKELDGKHIGVAQGATTKVNLEKYAKEHKLKFSYAQLGSF 179 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ + A+R DA++ D S L IL + + A + D Sbjct: 180 PELAISLYANRIDAFSVDKSILSGYLS-----PHTTILKEGFNTQEYGIATSKQDKVLIP 234 Query: 240 IVSWTHYAM 248 V+ + Sbjct: 235 YVNKLLVSW 243 >gi|55821555|ref|YP_139997.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus thermophilus LMG 18311] gi|55737540|gb|AAV61182.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus thermophilus LMG 18311] Length = 284 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 100/251 (39%), Gaps = 20/251 (7%) Query: 2 YKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 K F + L ++ T+ + A + +IKK G L+ + F V Sbjct: 5 KKIFALLALVFALVAVTACSSNSSSGKSTAKARTIEEIKKSGELRIAVFADKKPFGYVDN 64 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G ++G+D+ L+ + P +Y+ ++A R L S ++DI N T R+ Sbjct: 65 KGAYQGYDIGLGNRLAKDLGVKP---KYVSVDAANRAEFLISNKVDITLANFTVTDERKK 121 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F G + K K I V +L G ++ V GTT E F+ + Sbjct: 122 --QVDFALPYMKVSIGVVSPKDKVIKDVKELEGKTLIVTKGTTAETY----FEKNYPNIK 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +++ + A R DA++ D + + A + V + + +APA+ + Sbjct: 176 LQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGYEVGITSLGDPDTIAPAVQK 233 Query: 233 GDTEWYNIVSW 243 G+ E + ++ Sbjct: 234 GNKELLDFINK 244 >gi|257899739|ref|ZP_05679392.1| extracellular solute-binding protein [Enterococcus faecium Com15] gi|257837651|gb|EEV62725.1| extracellular solute-binding protein [Enterococcus faecium Com15] Length = 271 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 11/261 (4%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F+ L + +L F S +A I + + G++ V +G Sbjct: 1 MKKISFLFALFVGLLLFAGCSNKKASADNWAAINEEKKIVIGLDDTFVPMGFRDKDGKLT 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + + P++ + L + ID++ T RE + Sbjct: 61 GFDIDLAKAVFEQY---RITVDFQPIDWSMKEFELNNGTIDLIWNGYSKTPAREK--KVQ 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 F + Q I K+ GI+S Q+ + Q G++ + K + Sbjct: 116 FTKPYMENDQVLITPKESGITSFEQMKNKRLGAQNGSSGYDVFTKQPEVLKEIVKNQDAV 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ E ++ R D D + + + A + + D Sbjct: 176 LYDSFNEALIDLKSGRIDGLLMDKVYADYYLKQRNELEDFNMTKGSYESEDFAVGVRKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 ++ + E Sbjct: 236 DTLVKKINEAFDRLEKTGEFQ 256 >gi|317012953|gb|ADU83561.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori Lithuania75] Length = 277 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 113/256 (44%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 8 KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGY 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 68 DVIIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G I K I ++ +L + V GTT + F + + FE+ Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A ++ A D + L A T P + + + K +APAI +G+ + Sbjct: 181 TETFLALLNNKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238 Query: 240 IVSWTHYAMVTAEELG 255 ++ ++++++ L Sbjct: 239 WLNNEIDSLISSDFLK 254 >gi|15896854|ref|NP_350203.1| amino acid ABC transporter periplasmic-binding protein [Clostridium acetobutylicum ATCC 824] gi|15026720|gb|AAK81543.1|AE007858_4 Amino acid (probably glutamine) ABC transporter, periplasmic binding protein component [Clostridium acetobutylicum ATCC 824] gi|325511028|gb|ADZ22664.1| Amino acid (probably glutamine) ABC transporter, periplasmic binding protein component [Clostridium acetobutylicum EA 2018] Length = 264 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 85/254 (33%), Gaps = 19/254 (7%) Query: 1 MYKDFF------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-AN 53 M K F V L + ++ + L +KK + GI+ A Sbjct: 1 MLKKIFSLSVVLVLTLAIFTGCTSATVSKDDSLERVKKAKEIVIGIDDTYPPMEFKDKAT 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GFD+D A++ + +++P + FLAL+SK+ D++ + T R+ Sbjct: 61 GKVSGFDIDMANAIAKKLGVKT---KFVPNSFDGIFLALKSKKFDVVHSSISITDERKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F + G + I + + + + GTT + LA Sbjct: 117 -AMIFSDPYIYGGNAIFVKSDNTTIKNEKDFNNQVVGCEVGTTAQDVLAKISGIK----E 171 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + + + + R A D + P + L +++ P+ A + Sbjct: 172 VKKYNAMTDAFLDLQNGRIAAVVSDP--MVGDYYNVTDPGKFKKLESSLTQEPIGVAFRK 229 Query: 233 GDTEWYNIVSWTHY 246 D + + Sbjct: 230 EDKSLRDAYNKAIK 243 >gi|254779722|ref|YP_003057828.1| ABC-type transport system, periplasmic component; putative amino-acid transporter GlnH; putative signal peptide [Helicobacter pylori B38] gi|254001634|emb|CAX29767.1| ABC-type transport system, periplasmic component; putative amino-acid transporter GlnH; putative signal peptide [Helicobacter pylori B38] Length = 287 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 18 KMWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGILKVGVFSDKPPFGSVDSKGKYQGY 77 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 78 DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTHTKEREKV--VDFA 135 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G + K I ++ +L + V GTT + F + + FE+ Sbjct: 136 KPYMKVALGVVS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 190 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A ++ A D + L A T P + + + K +APAI +G+ + Sbjct: 191 TETFLALLNNKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 248 Query: 240 IVSWTHYAMVTAEELG 255 ++ ++++++ L Sbjct: 249 WLNNEMDSLISSDFLK 264 >gi|242280218|ref|YP_002992347.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] gi|242123112|gb|ACS80808.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] Length = 262 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 86/249 (34%), Gaps = 11/249 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K V ++ +++ F T+ L ++K G L G++ + +G GFDVD Sbjct: 2 KRVLVLMVAMMLAFATTAMAGDGSLEKVQKAGKLVIGLDDTFAPMGFRQDDGTLVGFDVD 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + + KI++ P +L +K+ D + T RE ++F Sbjct: 62 AAEEVGKRLG---IKIEWQPTAWSGVIHSLNAKKFDCIWNGMTITPEREK--AVSFSKPY 116 Query: 123 YFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 D I K I + L G + VQ G+ A ++ + Sbjct: 117 IMDGQIAVIAMGNKSIKAHKDLGGKVVGVQKGSPALEAAKSLKPA---PKEIREYDTNVK 173 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + R + D + RP +++ LP I+ A QG+ V Sbjct: 174 ALLDLESGRLNGVVVDN--IAGRYSMAQRPGKYLALPGYITSEAFGIAFRQGEDSLRAAV 231 Query: 242 SWTHYAMVT 250 T AM+ Sbjct: 232 QKTIDAMIA 240 >gi|199597486|ref|ZP_03210915.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] gi|199591509|gb|EDY99586.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] Length = 270 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 90/256 (35%), Gaps = 13/256 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M + ++++ + + S A + I++ + G++ V + NG Sbjct: 1 MKRRMIMAVMAFLTMAGIVISGCARETVDNSWPRIERTKKVVIGLDDTFVPMGFRQKNGQ 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+D+D +A+ + ++ + L+++ ID++ T R+ Sbjct: 61 LAGYDIDLAKAVFKRYGIKAD---FQTIDWSMKETELKNQTIDLIWNGYSVTPERKA--K 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172 +AF + Q + K I+++ + G ++ VQ G++ L K Sbjct: 116 VAFSNDYLINHQILVTKTKSQINTLKDMKGKTLGVQTGSSGAFDLDAQPKLLKNMIANKT 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ + A R D P+ + I+ D A + + Sbjct: 176 PILYDTFNDAFIDLDAGRIQGILMDEVYARYYIAHKPDPASYHIIGDSFPPEEFAVGMRK 235 Query: 233 GDTEWYNIVSWTHYAM 248 D ++ A+ Sbjct: 236 SDHVLREKINAGLKAL 251 >gi|118475479|ref|YP_892322.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Campylobacter fetus subsp. fetus 82-40] gi|118414705|gb|ABK83125.1| glutamine-binding protein [Campylobacter fetus subsp. fetus 82-40] Length = 264 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 59/257 (22%), Positives = 105/257 (40%), Gaps = 16/257 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI--------LGDIKKRGFLKCGINTGLVGFAEVKA 52 M K ++ L F + S+N S L +IK +G G+ + GF + Sbjct: 1 MNKFVKGLLILGTGLVFAACSSNTSSDSKEANSNLENIKSKGIFTAGVKDDVPGFGLLNK 60 Query: 53 N-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G +GF++D + LS I D +K++ + + AK R L + +D + T R+ Sbjct: 61 QTGKIEGFEIDIAKLLSKHILGDENKVKLVSVTAKTRGPMLDNSTLDAVIATFTITDERK 120 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + + Y D G ++ K G++++ L G +I V +T++ ++ + K ++ Sbjct: 121 KT--YDYTTPYYKDAVGLLVRKDGGVNTLKDLEGGTIGVSMSSTSKKSILEAAKNLGIEL 178 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + I AA A R DA++ D S L VIL + + A Sbjct: 179 KFNEYPDYPSIKAALDAKRIDAFSVDKSILLGYI-----DDNSVILDESFAPQEYGIATR 233 Query: 232 QGDTEWYNIVSWTHYAM 248 + D E+ V A Sbjct: 234 KNDPEFSKYVDEFVIAN 250 >gi|171318958|ref|ZP_02908088.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171095843|gb|EDT40787.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 271 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 58/249 (23%), Positives = 90/249 (36%), Gaps = 11/249 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + L L +A L DI+K G L+ F V G Sbjct: 1 MKFHTLATWLVGAALVTAGTVAHADRLDDIRKAGVLRVATFDSNPPFGYVDGKSNHIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + +Q P N R L S ++D++ N T R + F Sbjct: 61 DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F+ K + S QL+ + GTT E+TL + + + ++ Sbjct: 116 IPYFSSGQQFLAKKG-VLKSADQLNNLRVGADKGTTNEITLREKYPKA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I IS + + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLLG 230 Query: 240 IVSWTHYAM 248 V+ T + Sbjct: 231 FVNDTLKGL 239 >gi|159027519|emb|CAO89483.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 299 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 97/256 (37%), Gaps = 11/256 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + V + + + ++ S+ A + I+K G + G + F V + G W G+ Sbjct: 1 MKRTLAVMTMTVALTVTSNHSSLAGAIFDRIQKTGVITAGARKDAIPFGFVNSQGKWVGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D + P K++ + + + RF L++ IDI +T +T RE + Sbjct: 61 SLDMLELIRKETERKLGKPIKLKIVEVTPQNRFEKLKTGVIDIECGSTTFTWKRE--NEV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G + K + + L+G I V A TT E + A + Sbjct: 119 DFSVSYFAGGTQLLTRKGSNLDDIGSLAGRRIGVIANTTNEAVIKTQQPAA----ILVKV 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235 + E D + D L L+ P+ I+P + A + + D+ Sbjct: 175 KSRGEGLQKLETGEIDGFASDGITLEGLRKNAKNPNNLAIVPSYPYAYESYACTLPENDS 234 Query: 236 EWYNIVSWTHYAMVTA 251 +W + V++T + Sbjct: 235 KWRDTVNYTLLKFMEG 250 >gi|33591939|ref|NP_879583.1| extracellular solute-binding protein [Bordetella pertussis Tohama I] gi|33571583|emb|CAE41071.1| probable extracellular solute-binding protein [Bordetella pertussis Tohama I] Length = 304 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 6/235 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQY 80 L I G + G + F+ AN G+ +D C + A+ D +++Y Sbjct: 29 GTLKKISDTGVITIGHRETSIPFSYYDANQKPVGYSIDICTRIVDAVKTRIKRDDIQVKY 88 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 LP+ + R + + ID+ +T TL + +AF T+ G FI K + ++ Sbjct: 89 LPVTSATRIPLMGNGTIDLECASTSNTL--DCQKQVAFSVTTFVTGNRFISLKSANLKTI 146 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G ++ +GT + +A ++ + + E R A+ D Sbjct: 147 DDLKGKTVASTSGTANIRQANEINEARSLGMKVVPVKEHAEGFLMVETGRAAAFIMDDIL 206 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 LY L P + + D +S P A + + D ++ +V T ++ + + Sbjct: 207 LYGLAANAKEPDRYQVSGDSLSIEPYAIMLRRDDPQFKALVDDTIKSLYASGDFE 261 >gi|183393066|gb|ACC61695.1| extracellular solute-binding protein family 3 protein [Lactobacillus rhamnosus HN001] Length = 269 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 90/256 (35%), Gaps = 13/256 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M + ++++ + + S A + I++ + G++ V + NG Sbjct: 1 MKRRMIMAVMAFLTMAGIVISGCARETVDNSWPRIERTKKVVIGLDDTFVPMGFRQKNGQ 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+D+D +A+ + ++ + L+++ ID++ T R+ Sbjct: 61 LAGYDIDLAKAVFKRYGIKAD---FQTIDWSMKETELKNQTIDLIWNGYSVTPERKA--K 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172 +AF + Q + K I+++ + G ++ VQ G++ L K Sbjct: 116 VAFSNDYLINHQILVTKTKSQINTLKDMKGKTLGVQTGSSGAFDLDAQPKLLKNMIANKT 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ + A R D P+ + I+ D A + + Sbjct: 176 PILYDTFNDAFIDLDAGRIQGILMDEVYARYYIAHKPDPASYHIIGDSFPPEEFAVGMRK 235 Query: 233 GDTEWYNIVSWTHYAM 248 D ++ A+ Sbjct: 236 SDHVLREKINAGLKAL 251 >gi|75906997|ref|YP_321293.1| extracellular solute-binding protein [Anabaena variabilis ATCC 29413] gi|75700722|gb|ABA20398.1| amino acid ABC transporter substrate-binding protein, PAAT family [Anabaena variabilis ATCC 29413] Length = 303 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 99/250 (39%), Gaps = 11/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 MYK+ +++ L + + + + + G L G + + FA A G G+ Sbjct: 3 MYKNLAIALFSLTLTTVIPDAAFGETVMQKVARTGVLTAGTSRDAMPFAYTNAQGQLTGY 62 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD + + +++ + L +R + ++Q+DI+ + +T R+ + Sbjct: 63 SVDMLSVIKQQLEKELGKKIQLKLVALTPAQRIPKIVNQQVDIVCDASSFTWERDK--KV 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G ++ + S L G I V A TT E + + + Sbjct: 121 DFSVSYGATGTQLLVKSGSNLGSPESLIGKRIGVLAQTTNEQAIKRV----QPQAKLVYL 176 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235 + E A + + DA++ D L + P + I+PD S+ +A + + ++ Sbjct: 177 KSRSEGYTALQEGKIDAFSSDSILLESWLQKAKNPDDFAIVPDRPYSREGIACMVPENNS 236 Query: 236 EWYNIVSWTH 245 ++ + V+++ Sbjct: 237 KFLDAVNYSL 246 >gi|27378207|ref|NP_769736.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] gi|27351354|dbj|BAC48361.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 302 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 91/254 (35%), Gaps = 6/254 (2%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC- 64 + + + L S + ++ L IK G + G + F+ + + GF +D C Sbjct: 13 LIGLAAVGTLAGPSIAADSPTLAKIKSSGAITIGHREASIPFSYLGPDQKPIGFSLDLCA 72 Query: 65 ---RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + + + + Y P+N+ R +QS +DI T R+ ++F Sbjct: 73 GIVERIKAELSLPNLAVNYTPVNSSNRIPLIQSGTVDIECGGTA--NDRKRQEQVSFSVA 130 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 T+ +++ G+ + L G +I V G+ + ++ + + E Sbjct: 131 TFVSQPRWLVKADSGLKTAGDLKGKTIVVTQGSNAVGFAQGVNAKEQLGFNIVQAKDHAE 190 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 R A+ D L LK +P + LP+ +K +GD + +V Sbjct: 191 SFLMLNTGRAAAFMEDDILLAGLKAAAPKPDALIFLPEGYAKIYYGLMFTKGDAGFKALV 250 Query: 242 SWTHYAMVTAEELG 255 + + + Sbjct: 251 DDVLSKQMASGQFE 264 >gi|77408339|ref|ZP_00785080.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae COH1] gi|77173020|gb|EAO76148.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae COH1] Length = 266 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 15/253 (5%) Query: 1 MYKDFFVSILCL----IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGD 55 M + +++ L I L F ST+A+ L +IKK G LK G+ + F A Sbjct: 1 MLRRKRLTLYLLSXIFIFLLFYPNSTSANQLSEIKKSGVLKVGVKQDVPNFGYYNAETNQ 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 ++G ++D + ++ ++ P ++P A+ R + + QIDIL T R+ + Sbjct: 61 YEGMEIDIAKKIAKSLGVKP---VFVPTTAQTREPLMDNGQIDILIATYTITPERKANYN 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + Y D GF++ K I ++ +L G I V G TT++ L Y K H +K+ Sbjct: 118 I--SKAYYHDEIGFLVRKNSHIKTIKELDGKHIGVAQGATTKVNLEKYAKEHKLKFSYAQ 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E+ + A+R DA++ D S L IL + + A + D Sbjct: 176 LGSFPELAISLYANRIDAFSVDKSILSGYLS-----PHTTILKEGFNTQEYGIATSKQDK 230 Query: 236 EWYNIVSWTHYAM 248 V+ + Sbjct: 231 VLIPYVNKLLVSW 243 >gi|125718374|ref|YP_001035507.1| polar amino acid ABC transporter amino acid-binding protein [Streptococcus sanguinis SK36] gi|125498291|gb|ABN44957.1| Polar amino acid ABC transporter, amino acid-binding protein, putative [Streptococcus sanguinis SK36] Length = 270 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 98/259 (37%), Gaps = 14/259 (5%) Query: 17 FTSFSTNASILGDIK---KRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72 ++S +K KRG L G+ + F + + + G ++D + ++ + Sbjct: 22 AAPAQADSSTSQQVKSIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG 81 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 I Y+P+ A+ R L + Q+D++ T R+ F Y D GF+++ Sbjct: 82 VK---INYVPVTAQTRGPLLDNGQVDMVIATFTITDERKEI--YNFTTPYYTDASGFLVN 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K I+ V L+ +I V G+ T+ L + + + + + E+ + RAHR D Sbjct: 137 KSSKITDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRID 196 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A + D S L + IL K+ + +T+ + V Sbjct: 197 AISVDKSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKWKEDG 251 Query: 253 ELGITQKNINQVSKDTTNP 271 L + +T+ Sbjct: 252 SLQKIYDKYDLKPSTSTDD 270 >gi|322386066|ref|ZP_08059705.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus cristatus ATCC 51100] gi|321269910|gb|EFX52831.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus cristatus ATCC 51100] Length = 288 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 101/259 (38%), Gaps = 27/259 (10%) Query: 1 MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44 M K L F + + A + +IKK G L+ + Sbjct: 1 MKLLKSLLTVFALAFALIFVTACGSGGNATSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V +G ++G+D++ L+ + +Y+ ++A R L S ++DI N Sbjct: 61 KPFGYVDNDGSYQGYDIELGNQLAKDLGVKA---KYVSVDAANRAEYLISNKVDITLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + KK I+ V QL G ++ V GTT E F Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKKGVITDVKQLEGKTLIVTKGTTAETY----F 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + ++ + +++ + A R DA++ D + + A + V + + Sbjct: 172 EKNHPEVKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGYEVGISSLGDPD 229 Query: 225 PLAPAIIQGDTEWYNIVSW 243 +APA+ +G+ E + ++ Sbjct: 230 TIAPAVQKGNKELLDFINK 248 >gi|262278743|ref|ZP_06056528.1| amino acid ABC transporter periplasmic protein [Acinetobacter calcoaceticus RUH2202] gi|262259094|gb|EEY77827.1| amino acid ABC transporter periplasmic protein [Acinetobacter calcoaceticus RUH2202] Length = 288 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 99/219 (45%), Gaps = 8/219 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + IKK G ++ G+ + F + A G +GFDV+ + ++ + D +K++++ Sbjct: 43 SSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVEFVLTE 102 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L++ ++DI+ N T R+ + F G + K I+ ++QL Sbjct: 103 AANRVEYLKANKVDIIFANFTVTPERKEV--VDFAKPYLKVALGVVSPKSHPITDIAQLK 160 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 ++ V GTT + +F + + +E+ E A + R A D + A Sbjct: 161 DKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGAALAHDNLLVLAW 216 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + P+ V + ++ + +APA+ +GD E + ++ Sbjct: 217 A--KENPNYTVGITNLGEQDLIAPAVKKGDKELLDWLNQ 253 >gi|300172943|ref|YP_003772109.1| polar amino acid ABC transporter substrate-binding protein [Leuconostoc gasicomitatum LMG 18811] gi|299887322|emb|CBL91290.1| Polar amino acid ABC transporter, substrate binding protein [Leuconostoc gasicomitatum LMG 18811] Length = 284 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 87/267 (32%), Gaps = 27/267 (10%) Query: 1 MYKD---------FFVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGIN 41 M K F I+ + + ++ + + S IK+ + G++ Sbjct: 4 MKKKIVVNAIIGLLFFGIVVWLAVGLSAGAKHNSQANQETSKTDEWQRIKQDKQITIGLD 63 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 V +G GFDVD A+ + +++ P++ + L + ID + Sbjct: 64 DTFVPMGFRDKDGKIIGFDVDLANAVFKTMG---ITVKWQPIDWSMKETELNTGNIDAIW 120 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 T RE + F + Q + KK I+S S + G + Q ++ + + Sbjct: 121 NGYTKTAAREKQVA--FSNTYHNATQVLVTLKKNNINSFSDMKGKVLGDQTASSGDESFN 178 Query: 162 DY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 + K + + ++ ++ A R D D P + + Sbjct: 179 QHPKVLKQYVKDQKVVGYDTFDKAFNDLNAGRIDGLLIDEDYARYYVAHQANPRNYTVTV 238 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTH 245 S A + D + V+ T Sbjct: 239 GGFSVDETAVGFRKSDNQLRQAVNQTL 265 >gi|70733091|ref|YP_262864.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] gi|68347390|gb|AAY94996.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] Length = 300 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 93/249 (37%), Gaps = 7/249 (2%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFC----RA 66 + + + L I + G V F+ V +G G+ V+ Sbjct: 15 FSAMSQANEAPLQGTLAKIANSASITLGYRDASVPFSYVGDNSGKPMGYSVELASKVVER 74 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + + K++Y + ++ R +Q+ +D+ +T T R+ + F + Sbjct: 75 IQQQLHLPNLKVKYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQVA--FSYGFIYVK 132 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 + K GI S + L G ++ AGTT E L Y H + I + E Sbjct: 133 GQLLTAKDSGIKSFADLRGKNVVTTAGTTNERFLKSYNVEHKIDMFVISAKDHGEAFQML 192 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 ++ R A+ D + LY + P V++ + S+ + + + D ++ +V+ Sbjct: 193 QSGRAAAFYMDDALLYGERAKARDPHNWVVVGEEQSREIYSCMVRKDDPQFLALVNGALA 252 Query: 247 AMVTAEELG 255 + + E+ Sbjct: 253 DLYRSGEIN 261 >gi|323517654|gb|ADX92035.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii TCDC-AB0715] Length = 280 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 99/219 (45%), Gaps = 8/219 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + IKK G ++ G+ + F + A G +GFDV+ + ++ + D +K++++ Sbjct: 35 SSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVEFVLTE 94 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L++ ++DI+ N T R+ + F G + K I+ V+QL Sbjct: 95 AANRVEYLKANKVDIIFANFTVTPERKEV--VDFAKPYLKVALGVVSPKSHPITDVAQLK 152 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 ++ V GTT + +F + + +E+ E A + R A D + A Sbjct: 153 DKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGAALAHDNLLVLAW 208 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + P+ V + ++ + +APA+ +GD E + ++ Sbjct: 209 A--KENPNYTVGITNLGEQDLIAPAVKKGDKELLDWLNQ 245 >gi|184157762|ref|YP_001846101.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii ACICU] gi|260550585|ref|ZP_05824794.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp. RUH2624] gi|294842168|ref|ZP_06786851.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp. 6014059] gi|299770570|ref|YP_003732596.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp. DR1] gi|183209356|gb|ACC56754.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Acinetobacter baumannii ACICU] gi|260406296|gb|EEW99779.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp. RUH2624] gi|298700658|gb|ADI91223.1| amino acid ABC transporter periplasmic protein [Acinetobacter sp. DR1] gi|322508072|gb|ADX03526.1| Putative amino acid transport protein [Acinetobacter baumannii 1656-2] Length = 288 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 99/219 (45%), Gaps = 8/219 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + IKK G ++ G+ + F + A G +GFDV+ + ++ + D +K++++ Sbjct: 43 SSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVEFVLTE 102 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L++ ++DI+ N T R+ + F G + K I+ V+QL Sbjct: 103 AANRVEYLKANKVDIIFANFTVTPERKEV--VDFAKPYLKVALGVVSPKSHPITDVAQLK 160 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 ++ V GTT + +F + + +E+ E A + R A D + A Sbjct: 161 DKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGAALAHDNLLVLAW 216 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + P+ V + ++ + +APA+ +GD E + ++ Sbjct: 217 A--KENPNYTVGITNLGEQDLIAPAVKKGDKELLDWLNQ 253 >gi|25010745|ref|NP_735140.1| hypothetical protein gbs0690 [Streptococcus agalactiae NEM316] gi|77410777|ref|ZP_00787135.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae CJB111] gi|23095099|emb|CAD46334.1| unknown [Streptococcus agalactiae NEM316] gi|77163156|gb|EAO74109.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae CJB111] gi|319744751|gb|EFV97093.1| polar amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus agalactiae ATCC 13813] Length = 266 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 62/253 (24%), Positives = 106/253 (41%), Gaps = 15/253 (5%) Query: 1 MYKDFFVSILCL----IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGD 55 M + +++ L I L F ST+A+ L +IKK G LK G+ + F A Sbjct: 1 MLRRKRLTLYLLSCIFIFLLFYPNSTSANQLSEIKKSGVLKVGVKQDVPNFGYYNAETNQ 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 ++G ++D + ++ ++ P ++P A+ R + + QIDIL T R+ + Sbjct: 61 YEGMEIDIAKKIAKSLGVKP---VFVPTTAQTREPLMDNGQIDILIATYTITPERKANYN 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + Y D GF++ K I ++ +L G I V G TT+ L Y K H +K+ Sbjct: 118 I--SKAYYHDEIGFLVRKNSHIKTIKELDGKHIGVAQGATTKGNLEKYAKEHKLKFSYAQ 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E+ + A+R DA++ D S L IL + + A + D Sbjct: 176 LGSFPELAISLYANRIDAFSVDKSILSGYLS-----PHTTILKEGFNTQEYGIATSKQDK 230 Query: 236 EWYNIVSWTHYAM 248 V+ + Sbjct: 231 VLIPYVNKLLVSW 243 >gi|323165232|gb|EFZ51022.1| general L-amino acid-binding periplasmic aapJ domain protein [Shigella sonnei 53G] Length = 93 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 42/95 (44%), Positives = 64/95 (67%), Gaps = 2/95 (2%) Query: 248 MVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYG 307 M+ AEE+GI +N+++ + + PD+ LG + + G+ L L W Y II+ +GNY Sbjct: 1 MLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNIIKQVGNYS 58 Query: 308 EMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R Sbjct: 59 EIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 93 >gi|120612710|ref|YP_972388.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120591174|gb|ABM34614.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 300 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 100/243 (41%), Gaps = 7/243 (2%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL----SSAIF 72 ++F+ L IK G + G+ G + +G + GF D C + + Sbjct: 16 GSAFAQANDTLAKIKASGTITEGVRESS-GLSYTLGDGKYTGFHYDVCARVISDVQKQLG 74 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 + +Y P+ ++ R +Q+ +DI +T R+ + F TY + + Sbjct: 75 LSKLETRYQPVTSQNRIPLVQNGTVDIECGSTTNNQARQKDVA--FAVTTYVEEVRIAVK 132 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 GIS + L+G +I GTT+ TL +A + + + + + + R D Sbjct: 133 ANSGISGIKDLNGKTIATTTGTTSVQTLRKNKRAEGLTFKEVFGKDHSDSFLLLESGRAD 192 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A+ D S L + + P++ I+ + +S P+A I + D + V + M+ + Sbjct: 193 AFIMDGSILASNIAKSKAPNDFKIVGETLSVEPIAIMIRKDDPAFKKAVDDSLKGMMKSG 252 Query: 253 ELG 255 E+ Sbjct: 253 EMA 255 >gi|328946749|gb|EGG40887.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1087] Length = 270 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 11/259 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72 + + S+ + + I+KRG L G+ + F + + + G ++D + ++ + Sbjct: 22 AVPAQADSSTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG 81 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 I Y+P+ A+ R L + Q+D++ T R+ F Y D GF+++ Sbjct: 82 VK---INYVPVTAQTRGPLLDNGQVDMVIATFTITDERKEI--YNFTTPYYTDASGFLVN 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K I V L+ +I V G+ T+ L + + + + + E+ + RAHR D Sbjct: 137 KSSKIKDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRID 196 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A + D S L + IL K+ + +T+ + V Sbjct: 197 AISVDKSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKWKENG 251 Query: 253 ELGITQKNINQVSKDTTNP 271 L + D+T+ Sbjct: 252 SLQKLYDKYDLKPSDSTDD 270 >gi|153953603|ref|YP_001394368.1| extracellular amino acid-binding protein [Clostridium kluyveri DSM 555] gi|219854225|ref|YP_002471347.1| hypothetical protein CKR_0882 [Clostridium kluyveri NBRC 12016] gi|146346484|gb|EDK33020.1| Extracellular amino acid-binding protein [Clostridium kluyveri DSM 555] gi|219567949|dbj|BAH05933.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 269 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 88/257 (34%), Gaps = 17/257 (6%) Query: 2 YKDFFVSILCLI--ILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANG 54 +K VS++ +I + FT N+ L +KK G LK G+ + Sbjct: 4 FKKAIVSLVMIIFTVALFTGCGNNSGNETQNSLEKVKKAGVLKIGLEDSFPPMEFRDSKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 +GFDVD A+ + ++ LAL+S + D++ + Sbjct: 64 VLQGFDVDMANAIGEKLGVKTE---FVGTEFNGIVLALKSGKFDVIISGLSI--DEDRKK 118 Query: 115 GLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + Q I + I + L G + V GTT+E + Sbjct: 119 EIDFSEPYIENSQIIITKVENDTIKTSKDLEGKIVGVGLGTTSEKVAKELTGLK----EV 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +++ E R DA D +D+ ++ +L + ++ P+ +G Sbjct: 175 KKYDKTTEELQDLLIGRIDAVIVDEPVGKYYISADDKKGKYTVLNEKLTSEPMGIGFRKG 234 Query: 234 DTEWYNIVSWTHYAMVT 250 D E V + Sbjct: 235 DKELEEAVQRAVNELKE 251 >gi|300853855|ref|YP_003778839.1| putative extracellular amino acid-binding protein [Clostridium ljungdahlii DSM 13528] gi|300433970|gb|ADK13737.1| predicted extracellular amino acid-binding protein [Clostridium ljungdahlii DSM 13528] Length = 274 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 87/260 (33%), Gaps = 24/260 (9%) Query: 1 MYK-----DFFVSILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGLVG 46 M K ++I+ LF S+N++ L +KK G LK G+ Sbjct: 1 MKKLKKTIIVMLTIVFAAALFAGCGSSNSNSGDEQKGQNALERVKKAGVLKVGLEDSFPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 KGFD+D A+ + Q++ LAL S + D++ Sbjct: 61 MEFRDNQNVLKGFDIDMANAIGKKLGVKT---QFVGTEFNGIILALNSGKFDVIISGLSI 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFK 165 R+ + F + Q + I + L+G + V GTT+E + Sbjct: 118 DEKRKK--QIDFSQPYIQNAQIIVTKSGNEAIKTSKDLAGKKVGVGLGTTSEKVVQ---- 171 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 +++ E R DA D + D+ ++ +L + ++ P Sbjct: 172 TLQGIKEVKKYDKTTEELQDLLIGRIDAVIVDEPVGKYYISSPDKKGKYTVLNEKLTNEP 231 Query: 226 LAPAIIQGDTEWYNIVSWTH 245 + +GD E V Sbjct: 232 MGVGFKKGDKELETAVQKAL 251 >gi|83593422|ref|YP_427174.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC 11170] gi|83576336|gb|ABC22887.1| extracellular solute-binding protein, family 3 [Rhodospirillum rubrum ATCC 11170] Length = 305 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 88/242 (36%), Gaps = 7/242 (2%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIF 72 S L IK+ G + G + F+ + N G+ +D C A+ + + Sbjct: 19 SASAEELTGTLKKIKETGEIAIGHRDSSIPFSYLDDNQKPIGYAMDICAHVVEAVKAELK 78 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 D ++ P+ + R + + +D+ +T L + +F + F+ Sbjct: 79 LDTLAVKLTPVTSATRIPLIANGTVDLECGSTTNNL--DRQQQASFTNSHFLTASRFVSK 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K + S+ L G ++ AGTT + + A + I + E R Sbjct: 137 KTSNLKSIDDLKGKTVVSTAGTTNIKQVNELNTARGLGIKIIPAKDHAEGFLMVETDRAV 196 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 A+ D L L + PS +VI D S P + + D + +V A+ T+ Sbjct: 197 AFAMDDILLATLVAGSKTPSAYVISEDAFSLPEPYGIMLRKDDPAFKAVVDRATAALYTS 256 Query: 252 EE 253 E Sbjct: 257 PE 258 >gi|221212966|ref|ZP_03585942.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD1] gi|221167179|gb|EED99649.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD1] Length = 312 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 64/249 (25%), Positives = 93/249 (37%), Gaps = 11/249 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M L + L + A L DIKK G L+ F V A G Sbjct: 42 MKIHTLAKALVAVALIAAGTAAQADRLDDIKKAGVLRVATFDSNPPFGYVDAKTNRIVGL 101 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + +Q P N R L S ++D++ N T R + F Sbjct: 102 DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITEERAK--QVDFS 156 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F+ K + S QL+G I GTT E+TL + F + ++ Sbjct: 157 IPYFSSGQQFLAKKG-VLKSADQLNGLRIGADKGTTNEITLREKFPKA----TIVAYDDT 211 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I P IS + + +G+T Sbjct: 212 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPPFTISNDYMGVGVPKGETRLLG 271 Query: 240 IVSWTHYAM 248 V+ T + Sbjct: 272 FVNDTLKGL 280 >gi|15645786|ref|NP_207963.1| glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) [Helicobacter pylori 26695] gi|2314331|gb|AAD08218.1| glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) [Helicobacter pylori 26695] Length = 277 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F + S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 8 KMWGLFLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 68 DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G + K I ++ +L + V GTT + F + + FE+ Sbjct: 126 KPYMKVALGVVS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A ++ A D + L A T P + + + K +APAI +G+ + Sbjct: 181 TETFLALLNNKATALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238 Query: 240 IVSWTHYAMVTAEELG 255 ++ ++++++ L Sbjct: 239 WLNNEIDSLISSDFLK 254 >gi|261838498|gb|ACX98264.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori 51] Length = 287 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 18 KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 77 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 78 DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 135 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G I K I ++ +L + V GTT + F + + FE+ Sbjct: 136 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 190 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + A D + L A T P + + + K +APAI +G+ + Sbjct: 191 TETFLALLNDKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 248 Query: 240 IVSWTHYAMVTAEELG 255 ++ ++++++ L Sbjct: 249 WLNNEMDSLISSDFLK 264 >gi|237731337|ref|ZP_04561818.1| cysteine transporter [Citrobacter sp. 30_2] gi|226906876|gb|EEH92794.1| cysteine transporter [Citrobacter sp. 30_2] Length = 276 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 57/244 (23%), Positives = 95/244 (38%), Gaps = 11/244 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDV 61 K +++ L+ T A L DIK G +K F V A G+DV Sbjct: 9 KKTLLALGVLLASGLTVSQVQADQLADIKAAGVVKVATFDANPPFGSVDAKTHKIVGYDV 68 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 DF AL+ ++ ++ + N R LQS + D++ + T R + + F Sbjct: 69 DFAEALAKSLGVK---LELVATNPANRIPLLQSGKADLIVADITITPER--AQVIDFSVP 123 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + GQ F++ K + + S A I GTT E L F + + ++ + Sbjct: 124 YFVTGQQFLVPAKSP-DKLDEYSKARIGAVKGTTGEQALHQRFP----QSRVLAYDDIPL 178 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A R A T D + L L ++ ILPD++SK + + +G+ V Sbjct: 179 ALTALRNGNVQAITQDSTILAGLLGAAPDKADFKILPDLLSKEEIGVGVKKGEPALLKAV 238 Query: 242 SWTH 245 + Sbjct: 239 NDEL 242 >gi|217034252|ref|ZP_03439670.1| hypothetical protein HP9810_2g31 [Helicobacter pylori 98-10] gi|216943312|gb|EEC22774.1| hypothetical protein HP9810_2g31 [Helicobacter pylori 98-10] Length = 277 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 8 KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGY 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 68 DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G I K I ++ +L + V GTT + F + + FE+ Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + A D + L A T P + + + K +APAI +G+ + Sbjct: 181 TETFLALLNDKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238 Query: 240 IVSWTHYAMVTAEELG 255 ++ ++++++ L Sbjct: 239 WLNNEIDSLISSDFLK 254 >gi|6119888|gb|AAF04271.1|AF181878_1 amino acid binding protein [Helicobacter pylori] Length = 287 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F + S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 18 KMWGLFLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 77 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 78 DVIIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 135 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G I K I ++ +L + V GTT + F + + FE+ Sbjct: 136 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPDIKLLKFEQN 190 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A ++ A D + L A P + + + K +APAI +G+ + Sbjct: 191 TETFLALLNNKATALAHDNTLLLAWAKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLE 248 Query: 240 IVSWTHYAMVTAEELG 255 ++ ++++++ L Sbjct: 249 WLNNEMDSLISSDFLK 264 >gi|300855677|ref|YP_003780661.1| putative extracellular amino acid-binding protein [Clostridium ljungdahlii DSM 13528] gi|300435792|gb|ADK15559.1| predicted extracellular amino acid-binding protein [Clostridium ljungdahlii DSM 13528] Length = 263 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 88/251 (35%), Gaps = 17/251 (6%) Query: 1 MYKD-FFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + ++ FT TNA L +K G L G++ Sbjct: 1 MKKIGMIMLSAIMVFTLFTGCGTNAGEQDNSLNRVKDAGKLTIGLDDSYPPMEFRDNKNK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D AL+ + + + + LALQS + D++ + T R+ Sbjct: 61 LSGFDIDLGNALAQKLGVK---LNIVVTDFNGIVLALQSGKFDVILASMSITDERKK--K 115 Query: 116 LAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F GQ I I + + L G + VQ G T E A Sbjct: 116 IDFVGPYIDGGQIIITKAGNSSIKTKNDLKGKIVGVQLGATGEQAAAKVSGIK----EIK 171 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 ++++ E R DA D A + S +VIL D ++K P+ I + D Sbjct: 172 KYDKITEAFHEVNIGRIDAVVCD--AQVGQYYISKDKSNYVILKDRLTKEPIGIGIKKKD 229 Query: 235 TEWYNIVSWTH 245 + ++ Sbjct: 230 KKLEEALNKAL 240 >gi|293365028|ref|ZP_06611745.1| ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|307702261|ref|ZP_07639221.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] gi|291316478|gb|EFE56914.1| ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|307624274|gb|EFO03251.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] Length = 288 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 27/259 (10%) Query: 1 MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44 M K L F + + A + +IKK G L+ + Sbjct: 1 MKLLKPILTVFALAFALIFVTACSSGGSSDASSGKKTAKARTIDEIKKSGELRIAVFGDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F + +G ++G+D++ L+ + ++Y+ ++A R L S ++DI N Sbjct: 61 KPFGYIDNDGSYQGYDIELGNQLAQDLGVK---VKYVSVDAANRAEYLISNKVDITLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + K K I V +L G ++ V GTT E F Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKDKVIKDVKELEGKTLIVTKGTTAETY----F 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + ++ + +++ + A R DA++ D + + A + V + + Sbjct: 172 EKNHPEVKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGISSLGDPD 229 Query: 225 PLAPAIIQGDTEWYNIVSW 243 +APA+ +G+ E + ++ Sbjct: 230 TIAPAVQKGNQELLDYINQ 248 >gi|332108217|gb|EGJ09441.1| extracellular solute-binding protein [Rubrivivax benzoatilyticus JA2] Length = 295 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 86/234 (36%), Gaps = 6/234 (2%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI----FDDPSKIQYL 81 L +K G + + F+ + GF + C + + K+ Sbjct: 25 TLDKVKASGAIGVAYRESSIPFSYLDDKAQPVGFGFEICGRIVDEVKKVTGRPDLKVNLQ 84 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + + R L + IDI +T R + F ++ G F++ GI S++ Sbjct: 85 SVTSANRIPLLVNGTIDIECGSTTNNSDRAKQVA--FAINYFYTGTRFLVRSDSGIKSLA 142 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + GTT L + + + I + E ++ R A+ D L Sbjct: 143 DLNGKVLVSTTGTTNFRILRNLISENKLPIELIGAKDHAEAALLVQSGRAAAFGMDDILL 202 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 Y L+ ++ P+E ++ + I P A + + D + +V ++ + E Sbjct: 203 YGLRASSANPAELAVVGESIQVEPYAIMVRKDDPAFKQLVDGVLAGLMKSGEFE 256 >gi|283954480|ref|ZP_06372000.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 414] gi|283794097|gb|EFC32846.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 414] Length = 259 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 61/245 (24%), Positives = 97/245 (39%), Gaps = 10/245 (4%) Query: 2 YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K + + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 4 KKSLLKLAVFALGACVAFSNANAAEGKLESIKAKGQLIVGVKNDVPHYALLDQATGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + ID + T R+ F Sbjct: 64 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSIDAVIATFTITPERKRI--YNF 121 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + + K + F Sbjct: 122 SEPYYQDAVGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGEAAKKIGVDVKFSEFPD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R DA++ D S L ILPD + D + Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYIDDKS-----EILPDSFDPQSYGIVTKKDDPAFA 236 Query: 239 NIVSW 243 V Sbjct: 237 KYVDD 241 >gi|15612164|ref|NP_223816.1| amino acid ABC transporter [Helicobacter pylori J99] gi|4155688|gb|AAD06672.1| AMINO ACID ABC TRANSPORTER, BINDING PROTEIN PRECURSOR [Helicobacter pylori J99] Length = 277 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F + S + L IK+RG LK G+ + F V + G+++G+ Sbjct: 8 KMWGLFLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGNYQGY 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 68 DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G I K I ++ +L + V GTT + F + + FE+ Sbjct: 126 NPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A ++ A D + L A P + + + K +APAI +G+ + Sbjct: 181 TETFLALLNNKAIALAHDNTLLLAW--VKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238 Query: 240 IVSWTHYAMVTAEELG 255 ++ ++++++ L Sbjct: 239 WLNNEIDSLISSDFLK 254 >gi|300811758|ref|ZP_07092231.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497257|gb|EFK32306.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 276 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 96/261 (36%), Gaps = 16/261 (6%) Query: 1 MY--KDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K + L L T+ + IKKRG L G++ V + Sbjct: 1 MKWFKKILLLGLVLSCFLTTACSNLTKEANQKDTWAKIKKRGSLVIGLDDTFVPMDFRQK 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 +G G+DVD +A+ + + ++ + L++ ID+L T R+ Sbjct: 61 DGQLVGYDVDLAKAVCKKLGLKAD---FQTIDWSMKETELRNGTIDVLWNGYSVTSQRKK 117 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 +AF + Q ++ K GI S +Q+ G +I Q+G+T ++ L D + Sbjct: 118 --KVAFSRSYLRNRQVLVVKKSSGIKSFAQMKGQAIGAQSGSTAQIWL-DGSQKVIKPKS 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAII 231 ++++ + A R D + + ++ + L A + Sbjct: 175 KVLYDTIPSAFLDLNAGRIKGILLDETYAEYYIKHEADSKSYQVILNKEVPEDLFAVGMR 234 Query: 232 QGDTEWYNIVSWTHYAMVTAE 252 +GD ++ A + A+ Sbjct: 235 KGDKNLKKKINQAL-AELQAD 254 >gi|255973158|ref|ZP_05423744.1| amino acid ABC transporter [Enterococcus faecalis T1] gi|255964176|gb|EET96652.1| amino acid ABC transporter [Enterococcus faecalis T1] Length = 275 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 100/272 (36%), Gaps = 28/272 (10%) Query: 1 MYK--DFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGL 44 M K + + L++ ++ S + + +KK G +K G+ + Sbjct: 1 MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTATVEQLKKAGKIKVGVKEDI 60 Query: 45 VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F + + +G + D R ++ I ++++ + AK R L + ++D++ Sbjct: 61 PNFGYMNPDTNKNEGMEPDIARLIAKEITGSEENVEFVGVTAKTRGPLLDNGELDMVIAT 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + F Y D GF++ K+ SS+ L G +I V TT+ L Sbjct: 121 FTITDERKKT--YNFTTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 178 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + +K+ E+ A + R DA++ D S L IL D S Sbjct: 179 AQEEGIKFTYQELGSYPELKTALTSKRIDAFSVDKSILSGYVDGKT-----EILKDGFSP 233 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + +TE + ++ E Sbjct: 234 QEYGITTKKANTEL----NDYLNGLIEKWEKD 261 >gi|258508267|ref|YP_003171018.1| ABC transporter amino acid-binding protein [Lactobacillus rhamnosus GG] gi|257148194|emb|CAR87167.1| ABC transporter, amino acid-binding protein [Lactobacillus rhamnosus GG] gi|259649585|dbj|BAI41747.1| amino acid ABC transporter substrate binding component [Lactobacillus rhamnosus GG] Length = 270 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 90/256 (35%), Gaps = 13/256 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M + ++++ + + S A + I++ + G++ V + NG Sbjct: 1 MKRRMIMAVMVFLTMAGIVISGCARETVDNSWPRIERTKKVVIGLDDTFVPMGFRQKNGQ 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+D+D +A+ + ++ + L+++ ID++ T R+ Sbjct: 61 LAGYDIDLAKAVFKRYGIKAD---FQTIDWSMKETELKNQTIDLIWNGYSVTPERKA--K 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172 +AF + Q + K I+++ + G ++ VQ G++ L K Sbjct: 116 VAFSNDYLINHQIVVTKTKSQINTLKDMKGKTLGVQTGSSGAFDLDAQPKLLKNMIANKT 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ + A R D P+ + I+ D A + + Sbjct: 176 PILYDTFNDAFIDLDAGRIQGILMDEVYARYYIAHKPDPASYHIIGDSFPPEQFAVGMRK 235 Query: 233 GDTEWYNIVSWTHYAM 248 D ++ A+ Sbjct: 236 SDHVLREKINAGLKAL 251 >gi|317177920|dbj|BAJ55709.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori F16] Length = 277 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 8 KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 68 DVVIAKRMAFDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G + K I ++ +L + V GTT + F + + FE+ Sbjct: 126 KPYMKVALGVVS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + A D + L A P + + + K +APAI +G+ + Sbjct: 181 TETFLALLNDKAIALAHDNTLLLAWIKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238 Query: 240 IVSWTHYAMVTAEELG 255 ++ ++++++ L Sbjct: 239 WLNNEMDSLISSDFLK 254 >gi|257461201|ref|ZP_05626299.1| acriflavine resistance protein [Campylobacter gracilis RM3268] gi|257441575|gb|EEV16720.1| acriflavine resistance protein [Campylobacter gracilis RM3268] Length = 286 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 64/288 (22%), Positives = 112/288 (38%), Gaps = 27/288 (9%) Query: 1 MYKDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGLVG 46 M K ++ L LFF + S + IKKRG ++ + Sbjct: 1 MKKT-LSTLFILGALFFAGCNDEGKGSSNSAQGSAAPQSYIDGIKKRGVVRIAVFGDKPP 59 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F + G G+DV F + ++ + D SK+Q++ + A R L S ++DI N Sbjct: 60 FGYIDETGKNAGYDVYFAKRIAKELLGDESKVQFVLVEAANRAEFLASDKVDITLANFTV 119 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + F G K I+ VSQL ++ + GTT +L F Sbjct: 120 TPERKEV--VDFALPYMKVALGVAS-KDGDITDVSQLKDKTLLINKGTTADLY----FTK 172 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 ++ + + F++ E A R DA D + L+A T P V + + + + Sbjct: 173 NHPEIKLLKFDQNTETFGAMLDGRGDAIAHDNTLLFAW--TKSNPGFKVGIRSLGDQDVI 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 APA+ +G+ E + + A+E + + D++ Sbjct: 231 APAVKKGNDELRKWLDDLI--VKLADE-KFFHADYDATLAPVYGDDIK 275 >gi|229587795|ref|YP_002869914.1| putative amino acid ABC transporter substrate-binding protein [Pseudomonas fluorescens SBW25] gi|229359661|emb|CAY46509.1| putative amino acid ABC transport system, substrate-binding protein [Pseudomonas fluorescens SBW25] Length = 284 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 8/226 (3%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + S + IK R L G+ T F V G + GFD D R + + D +K++ Sbjct: 28 TAAAVSYIDKIKARDKLIVGVFTDKPPFGFVNEAGRYVGFDTDIGRRFAKDLLGDENKVE 87 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++ + R LQS ++D++ N T R+ + F ++ + + S Sbjct: 88 FVAVEPASRIPFLQSDKVDLILANMTVTPERKE--AVDFTNPNLKVAVQALVPQDSSVKS 145 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L+ + V GTT ++ L H+ + + FE+ E A A R DAY D Sbjct: 146 LDDLATRTTIVTTGTTADIWLT----KHHPDWKLLKFEKNSESLQALSAGRGDAYAQDNL 201 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L++ P V+ + ++P+APA+ +G+ E + V+ Sbjct: 202 VLFSWAKQ--NPGYRVLEEKLGDEAPIAPAVKKGNVELRDWVNAEL 245 >gi|300362122|ref|ZP_07058299.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus gasseri JV-V03] gi|300354741|gb|EFJ70612.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus gasseri JV-V03] Length = 277 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 95/253 (37%), Gaps = 16/253 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVK-AN 53 M K + IL L++ + + A ++ +K + G+ F + Sbjct: 4 MKKSIKIFILPLVLGLLITLTGCAKKQKSSNVYEQVKASKTITWGVKADTRLFGLMSIKT 63 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G +GF+VD +AL+ + +K +++ K R L++ ID + T R+ Sbjct: 64 GKIEGFEVDLAKALTKQMLGKNAKAEFVQTTPKTRIPLLKNGNIDAILATMTITPDRKK- 122 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + GQ ++ I +V L+G + GTT + + Sbjct: 123 -QVTFSEPYFTAGQSLLVKDNSTIKNVKDLNGKTALAVKGTTAVDNVKKFAPKAK----V 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + ++ + A +A + A T D L + N + ++ + P A+ +G Sbjct: 178 LEYDDYGQAFTALKAGQGQAMTTDNGLLAGIASENKG---YKLVGGTYTSEPYGIAVEKG 234 Query: 234 DTEWYNIVSWTHY 246 T + + ++ Sbjct: 235 QTGFADRINKALN 247 >gi|300362124|ref|ZP_07058301.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus gasseri JV-V03] gi|300354743|gb|EFJ70614.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus gasseri JV-V03] Length = 273 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 93/251 (37%), Gaps = 14/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M + + L ++L S ++ ++KK + G+ F + G Sbjct: 1 MKRKLRIFSLFTVLLSVFLLSACQKNTRNVYQEVKKSNEITWGVKADTRLFGLMSIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GF+VD AL+ + +K ++ AK + L++ ID + T R+ Sbjct: 61 IEGFEVDLANALTKEMLGKNAKASFVQTTAKTKIPLLKNGNIDAVLAAMTITTERKK--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F ++ GQ ++ + I +V L+G GTT + + + Sbjct: 119 IDFSNPYFYAGQSLLVKEDSSIRNVQDLNGKIALAVKGTTAVANVKKFAPKAK----VLE 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + A +A + A T D L + N + ++ + P A+ +G Sbjct: 175 FDDYGQAFTALKAGQGQAMTTDNGLLAGIATENKG---YKLVGGTYTNEPYGIAVNKGQK 231 Query: 236 EWYNIVSWTHY 246 + N ++ Sbjct: 232 QMKNAINRALN 242 >gi|187927460|ref|YP_001897947.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|309779838|ref|ZP_07674593.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ralstonia sp. 5_7_47FAA] gi|187724350|gb|ACD25515.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] gi|308921415|gb|EFP67057.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ralstonia sp. 5_7_47FAA] Length = 302 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 90/248 (36%), Gaps = 13/248 (5%) Query: 16 FFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----S 69 F ++ L IK G + G+ + F+ G+ D ++ Sbjct: 20 FGSAAHAEELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIGYSYDVATKIAEDVKK 79 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + K+ +P+ ++ R LQ+ ID+ +T L R+ +F + G Sbjct: 80 QLGLKDLKVNEIPVTSQNRITLLQNGTIDLECGSTTNNLERQK--QASFTNTIFIIGTRI 137 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ K G+ + L G ++ AGTT+E L M + I + + + Sbjct: 138 MVKKDSGVKDWADLKGKNVVTTAGTTSERLLRKMNDEKQMGMNIISTKDHGQSFLTLESG 197 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH---- 245 R A+ D + LY + P+E V++ S+ + + D + + T Sbjct: 198 RAVAFMMDDALLYGERAKAKNPAEWVVVAKPQSREAYGCMVRKDDKPFKALADKTIAGMM 257 Query: 246 -YAMVTAE 252 + AE Sbjct: 258 KDGTINAE 265 >gi|317180903|dbj|BAJ58689.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori F32] Length = 277 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 8 KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGY 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 68 DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G I K I ++ +L + V GTT + F + + FE+ Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + A D + L A T P + + + K +APAI +G+ + Sbjct: 181 TETFLALLNDKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238 Query: 240 IVSWTHYAMVTAEELG 255 ++ ++++++ L Sbjct: 239 WLNNEMDSLISSDFLK 254 >gi|325121847|gb|ADY81370.1| putative ABC transporter, periplasmic binding protein, amino acid [Acinetobacter calcoaceticus PHEA-2] Length = 288 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 50/218 (22%), Positives = 99/218 (45%), Gaps = 8/218 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + IKK G ++ G+ + F + A G +GFDV+ + ++ + D +K++++ Sbjct: 43 SSIEQIKKNGVVRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVEFVLTE 102 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A R L++ ++DI+ N T R+ + F G + K I+ V+QL Sbjct: 103 AANRVEYLKANKVDIIFANFTVTSERKEV--VDFAKPYLKVALGVVSPKSHPITDVAQLK 160 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 ++ V GTT + +F + + +E+ E A + R A D + A Sbjct: 161 DKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGAALAHDNLLVLAW 216 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + P+ V + ++ + +APA+ +GD E + ++ Sbjct: 217 A--KENPNYTVGITNLGEQDLIAPAVKKGDKELLDWLN 252 >gi|307704540|ref|ZP_07641447.1| ABC transporter substrate-binding protein [Streptococcus mitis SK597] gi|307621905|gb|EFO00935.1| ABC transporter substrate-binding protein [Streptococcus mitis SK597] Length = 288 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 27/259 (10%) Query: 1 MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44 M K + L F + + A + +IKK G L+ + Sbjct: 1 MKLLKPLLTVLALAFALIFVTACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V +G ++G+D++ L+ + ++Y+ ++A R L S ++DI N Sbjct: 61 KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYVSVDAANRAEYLISNKVDITLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + K I+ V QL G ++ V GTT E F Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + ++ + +++ + A R DA++ D + + A + V + + Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229 Query: 225 PLAPAIIQGDTEWYNIVSW 243 +A A+ +G+ E + ++ Sbjct: 230 TIAAAVQKGNQELLDFINK 248 >gi|315587062|gb|ADU41443.1| ABC superfamily ATP binding cassette transporter, binding protein [Helicobacter pylori 35A] Length = 287 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 18 KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGY 77 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 78 DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 135 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G + K I ++ +L + V GTT + F + + FE+ Sbjct: 136 KPYMKVALGVVS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 190 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + A D + L A T P + + + K +APAI +G+ + Sbjct: 191 TETFLALLNDKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 248 Query: 240 IVSWTHYAMVTAEELG 255 ++ ++++++ L Sbjct: 249 WLNNEMDSLISSDFLK 264 >gi|312115423|ref|YP_004013019.1| extracellular solute-binding protein family 3 [Rhodomicrobium vannielii ATCC 17100] gi|311220552|gb|ADP71920.1| extracellular solute-binding protein family 3 [Rhodomicrobium vannielii ATCC 17100] Length = 302 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 98/258 (37%), Gaps = 8/258 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M +V L L + + + + L IK G + G + F+ + A GF Sbjct: 1 MALSRWVLGLALFAMPGLAQAQDLTGTLKKIKDTGTITIGYRETSIPFSYLGAENKPVGF 60 Query: 60 DVDFCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +D C A+ + DD K Y+ + + R + + +D++ + R+ Sbjct: 61 AMDICEKIVDAVKKELKDDSIKTNYVAVTSSTRIPLIANGTVDLVCGSATNNAERQK--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 +++ Y ++ K I+S++ L G ++ AGTT L + +A N+ + Sbjct: 119 VSYTNSHYLSESKYVTKKASNINSIADLKGKTVVSTAGTTNIKQLNERNQADNLGLTILT 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGD 234 + E R A+ D L L + PS +VI D SK P + +GD Sbjct: 179 AKDHAEGFLMVETDRAAAFVMDDILLAGLAANSKDPSLYVISTDAFSKAEPYGIMLQKGD 238 Query: 235 TEWYNIVSWTHYAMVTAE 252 + V + E Sbjct: 239 EPFKKAVDDATAEIYKTE 256 >gi|187927921|ref|YP_001898408.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|187724811|gb|ACD25976.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] Length = 302 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 92/234 (39%), Gaps = 6/234 (2%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----P 75 +++ +L I+ G ++ V F+ A+ G+ VD C + + D Sbjct: 26 LASSTPVLDRIRDTGTVRVAYRESSVPFSFYDADKKPVGYAVDLCLRVVDKLRTDLKRPD 85 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K+QY+ + R A+ + D+ +T RE +AF Y G I+ Sbjct: 86 LKVQYVLVTPSTRMPAIADGKADLECGSTTNN--RERREKVAFTIPHYIAGIRMIVKTSS 143 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 GI L G ++ GTT+ L + + + + E A + DA+ Sbjct: 144 GIRRWDDLRGKTVVTTKGTTSVAELRKMNDVRVLNMNFLEAKDHAESFAMVETGKADAFA 203 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 D LY + P ++ ++ D+++ P A + + DTE+ +V ++ Sbjct: 204 MDDVLLYGFRANTKTPGDYAVVGDMLTVEPYAIMLSKDDTEFKRLVDRAMTNII 257 >gi|221069161|ref|ZP_03545266.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] gi|220714184|gb|EED69552.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] Length = 303 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 102/258 (39%), Gaps = 8/258 (3%) Query: 1 MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAE-VKANGD 55 M + ++ L+ T + + S L ++K G + G+ A + AN Sbjct: 4 MTANLTLACTALVAAMTTFGAQAQTAPGSTLEKLQKTGKVVIGVRESSAPMAYAIGANHR 63 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G+ V+ C + + I KI+Y+ + A+ +Q+ +D+ T L R+ + Sbjct: 64 FTGYHVELCEKVLAQIVPSA-KIEYMAITAQNTMPLVQNGTVDLGCGPTTNNLSRQKQVA 122 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F TY + ++S QL G ++ AGTT L Y +N+K + Sbjct: 123 --FAVTTYVSQVRMAVRADSPVTSFKQLDGKTVAASAGTTAVQLLRKYSHENNVKLPTQL 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E + R DA+ D + L + P + I+ + + P+A + + D Sbjct: 181 GKDHFESFLMLESGRADAFVLDDNLLAGVIANAKDPKGYKIVGEALGSEPIALLMRKDDP 240 Query: 236 EWYNIVSWTHYAMVTAEE 253 + V M+ + E Sbjct: 241 GFKKAVDDALVRMMKSGE 258 >gi|224368338|ref|YP_002602501.1| ABC-type histidine transport system, periplasmic histidine-binding protein (HBP) precursor [Desulfobacterium autotrophicum HRM2] gi|223691054|gb|ACN14337.1| ABC-type histidine transport system, periplasmic histidine-binding protein (HBP) precursor [Desulfobacterium autotrophicum HRM2] Length = 259 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 87/261 (33%), Gaps = 22/261 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K FVSI+ L+ + S ++ G F + +G +GFD Sbjct: 1 MKKTLFVSIVLLVAMVAGSAFAGNIT--------KVRMGTEGAYPPFNFIDKDGKLQGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL A + +++ + L +K+ D + + T R + F Sbjct: 53 VDIAKALCVAAGVE---CEFVMQDWDGMIPGLLAKKFDTIIASMSITQER--LQKVNFTK 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y FI K + L G ++ VQ GT E + D F + + Sbjct: 108 KYYLTPAKFIAKKGSNFEITPEGLKGKTVGVQRGTIHENFVRDKF---GKTMNIKSYATQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E + + R D D L L + + + + AI + D Sbjct: 165 DEANMDLASGRVDLVIADTVVLSDGFLNKKEGKDFEFVGPGFTDKKWFGEGIGIAIRKED 224 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 E ++++ + E Sbjct: 225 KELLDLMNKAIDTIRANGEYQ 245 >gi|240102149|ref|YP_002958457.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Thermococcus gammatolerans EJ3] gi|239909702|gb|ACS32593.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Thermococcus gammatolerans EJ3] Length = 257 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 86/254 (33%), Gaps = 17/254 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M +L L++ + S S K L G + F G+ GF Sbjct: 5 MDGKIIGGLLVLMLAAAVASSGCISGGSKEK---VLVVGTSADFPPFEYKDPQTGNITGF 61 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D++ + ++ D ++ ++ ALQ+ ++D++ T R+ + F Sbjct: 62 DIELIKMVAKKAGYDK--VEIKDMDFDSLIPALQTGKVDVVIAGMTITEKRK--QVVDFS 117 Query: 120 PITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + Q ++ K I+ S+ L G I V+ GTT + + D + + Sbjct: 118 IPYWKADQAVVVRKDSSITVSSLDDLKGKVIGVEKGTTGAIYIKDNL---GDQVTLKEYN 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A + D D + ++ I + A+ +G+ E Sbjct: 175 SYVAALQALLNGQVDVLVIDSPV----ANMFTNKYDVKVVYTINTNEHYGIAVKKGNKEL 230 Query: 238 YNIVSWTHYAMVTA 251 + ++ ++ + Sbjct: 231 LDKINKALQDIMNS 244 >gi|324991490|gb|EGC23423.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK353] Length = 270 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 11/259 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72 + + S+ + + I+KRG L G+ + F + + + G ++D + ++ + Sbjct: 22 AVPAQADSSTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG 81 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 I Y+P+ A+ R L + Q+D++ T R+ F Y D GF+++ Sbjct: 82 VK---INYVPVTAQTRGPLLDNGQVDMVIATFTITDERKEI--YNFTTPYYTDASGFLVN 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K I+ V L+ +I V G+ T+ L + + + + + E+ + RAHR D Sbjct: 137 KSSKITDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRID 196 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A + D S L + IL K+ + +T+ + V Sbjct: 197 AISVDKSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKWKEDG 251 Query: 253 ELGITQKNINQVSKDTTNP 271 L + +T+ Sbjct: 252 SLQKIYDKYDLKPSASTDD 270 >gi|289168272|ref|YP_003446541.1| ABC transporter substrate binding lipoprotein-amino acid transport [Streptococcus mitis B6] gi|288907839|emb|CBJ22679.1| ABC transporter substrate binding lipoprotein-amino acid transport [Streptococcus mitis B6] Length = 288 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 102/259 (39%), Gaps = 27/259 (10%) Query: 1 MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44 M K + L F + + A + DIKK G L+ + Sbjct: 1 MKLFKPLLTVLALAFALIFVTACSSGGNAASSSGKTTAKARTIDDIKKSGELRIAVFGDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V +G ++G+D++ L+ + ++Y+ ++A R L S ++DI N Sbjct: 61 KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYVSVDAANRAEYLISNKVDITLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + K I+ V QL G ++ V GTT E F Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + ++ + +++ + A R DA++ D + + A + V + + + Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGNPD 229 Query: 225 PLAPAIIQGDTEWYNIVSW 243 +A A+ +G+ E + ++ Sbjct: 230 TIAAAVQKGNQELLDFINK 248 >gi|327461008|gb|EGF07341.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1057] Length = 270 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 11/259 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72 + + S+ + + I+KRG L G+ + F + + + G ++D + ++ + Sbjct: 22 AVPAQADSSTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG 81 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 I Y+P+ A+ R L + Q+D++ T R+ F Y D GF+++ Sbjct: 82 VK---INYVPVTAQTRGPLLDNGQVDMVIATFTITDERKEI--YNFTTPYYTDASGFLVN 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K I+ V L+ +I V G+ T+ L + + + + + E+ + RAHR D Sbjct: 137 KSSKITDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRID 196 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A + D S L + IL K+ + +T+ + V Sbjct: 197 AISVDKSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKWKEDG 251 Query: 253 ELGITQKNINQVSKDTTNP 271 L + +T+ Sbjct: 252 SLQKLYDKYDLKPSTSTDD 270 >gi|315926090|ref|ZP_07922290.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315620534|gb|EFV00515.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 273 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 87/250 (34%), Gaps = 10/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K V L ++ F+T S G L+ G N F N GF Sbjct: 1 MKKKLTVIALAACLVAVIGFATGCGSKQKSALDDGVLQIGTNAEYTPFEYKDKNNKLVGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD RAL+ + ++ + F L S Q + + T R+ S + Sbjct: 61 DVDLGRALAKKMGVKA---KWTNTSFDGIFNGLNSGQYECIIAGVSNTDKRQKSFAM--S 115 Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 +G + + + QL G + VQ TT + A FK K F+ Sbjct: 116 DSYLGNGVVIVSPAGGAQATDIKQLDGKKVGVQLETTAD-YAAKAFKKDGNKMTLKEFDS 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + A R + D D A +P+ + + +S P+A + DT Sbjct: 175 MIDAFTALRGGQIDYIMTDEP--VANFYVAQQPNTYKVSSSTLSNEPVAVVCRKQDTALR 232 Query: 239 NIVSWTHYAM 248 + ++ A+ Sbjct: 233 DKINDALKAL 242 >gi|311280748|ref|YP_003942979.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] gi|308749943|gb|ADO49695.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] Length = 276 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 63/324 (19%), Positives = 109/324 (33%), Gaps = 63/324 (19%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDV 61 K V++ L + + A L +IK G +K F V + G+D+ Sbjct: 9 KRTAVALSVLATAGLAAQTARADQLANIKAAGVIKVATFDANPPFGSVDGKTHELVGYDI 68 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 DF AL+ ++ ++ + N R LQS + D++ + T R + + F Sbjct: 69 DFANALAKSLGVK---LELVATNPANRIPLLQSGKADVIVADITITPER--AQVIDFSTP 123 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + GQ F++ K G + A I GTT E L F + + ++ + Sbjct: 124 YFVTGQQFLVAAKAGDQ-LEDYQHARIGAVKGTTGEQALHQRFP----QSRVLAYDDIPL 178 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A R A T D + L L + ILPD++SK + + +G+ N V Sbjct: 179 ALTALRNGNVQAITQDSTILAGLLAGAPDKASFKILPDLLSKEEIGVGVKKGEPALLNAV 238 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 + ++ R +KS + Sbjct: 239 NA----------------------------ELGRL---EKSGEAAK-------------- 253 Query: 302 HMGNYGEMFDRNLGNQSELKIPRG 325 ++DR G + PR Sbjct: 254 -------IYDRWFGPHTPTPQPRS 270 >gi|229552065|ref|ZP_04440790.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus rhamnosus LMS2-1] gi|258539479|ref|YP_003173978.1| amino acid ABC transporter substrate-binding protein [Lactobacillus rhamnosus Lc 705] gi|229314582|gb|EEN80555.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus rhamnosus LMS2-1] gi|257151155|emb|CAR90127.1| ABC transporter, amino acid-binding protein [Lactobacillus rhamnosus Lc 705] Length = 270 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 90/256 (35%), Gaps = 13/256 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M + ++++ + + S A + I++ + G++ V + NG Sbjct: 1 MKRRMIMAVMVFLTMAGIVISGCARETVDNSWPRIERTKKVVIGLDDTFVPMGFRQKNGQ 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+D+D +A+ + ++ + L+++ ID++ T R+ Sbjct: 61 LAGYDIDLAKAVFKRYGIKAD---FQTIDWSMKETELKNQTIDLIWNGYSVTPERKA--K 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172 +AF + Q + K I+++ + G ++ VQ G++ L K Sbjct: 116 VAFSNDYLINHQILVTKTKSQINTLKDMKGKTLGVQTGSSGAFDLDAQPKLLKNMIANKT 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ + A R D P+ + I+ D A + + Sbjct: 176 PILYDTFNDAFIDLDAGRIQGILMDEVYARYYIAHKPDPASYHIIGDSFPPEEFAVGMRK 235 Query: 233 GDTEWYNIVSWTHYAM 248 D ++ A+ Sbjct: 236 SDHVLREKINAGLKAL 251 >gi|308062450|gb|ADO04338.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori Cuz20] Length = 277 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 8 KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 68 DVIIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G I K I ++ +L + V GTT + F + + FE+ Sbjct: 126 KPYMKVALGVIS-KDGAIKNIEELENKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A ++ A D + L A T P + + + K +APAI +G+ + Sbjct: 181 TETFLALLNNKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238 Query: 240 IVSWTHYAMVTAEELG 255 + ++++++ L Sbjct: 239 WLDNEMDSLISSDFLK 254 >gi|297380350|gb|ADI35237.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori v225d] Length = 277 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 8 KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 68 DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G I K I ++ +L + V GTT + F + + FE+ Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A ++ A D + L A T P + + + K +APAI +G+ + Sbjct: 181 TETFLALLNNKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238 Query: 240 IVSWTHYAMVTAEELG 255 + ++++++ L Sbjct: 239 WLDNEIDSLISSDFLK 254 >gi|257095474|ref|YP_003169115.1| family 3 extracellular solute-binding protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047998|gb|ACV37186.1| extracellular solute-binding protein family 3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 285 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 62/248 (25%), Positives = 102/248 (41%), Gaps = 7/248 (2%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + + L ++ + S+L IK+ G LK G + F+ V + +G+ V Sbjct: 3 KRTLLLGGLVASLVIAMPVMASESVLARIKQSGTLKLGYRENSMPFSFVGDDKQPRGYSV 62 Query: 62 DFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D CR ++ + ++++P+ A+ RF AL+S ID+ NT TL R Sbjct: 63 DLCRIVAEDLGKQLDLPKLDVRWVPVTAQSRFEALKSGAIDLECGNTTQTLARRA--DFD 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F +T+ DG G + + SS+ G + V AGTTTE TL D A + + I Sbjct: 121 FSLMTFIDGAGLLFLDGEVPSSLEATKGQRVAVVAGTTTEKTLEDLIAAGKLGVYLIKVP 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + A + AY D + L L + + S P A+ + D ++ Sbjct: 181 DHDAALRALKDKTATAYAADRTVLITTALVRGQGQAFALATLQFSYEPYGLAMRR-DADF 239 Query: 238 YNIVSWTH 245 V T Sbjct: 240 RLAVDRTL 247 >gi|313124501|ref|YP_004034760.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312281064|gb|ADQ61783.1| Amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 276 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 96/261 (36%), Gaps = 16/261 (6%) Query: 1 MY--KDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K + L L T+ + IKKRG L G++ V + Sbjct: 1 MKWFKRILLLGLVLSCFLTTACSNLTKEANQKDTWAKIKKRGSLVIGLDDTFVPMDFRQK 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 +G G+DVD +A+ + + ++ + L++ ID+L T R+ Sbjct: 61 DGQLVGYDVDLAKAVCKKLGLKAD---FQTIDWSMKETELRNGTIDVLWNGYSVTSQRKK 117 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 +AF + Q ++ K GI S +Q+ G +I Q+G+T ++ L D + Sbjct: 118 --KVAFSRSYLRNRQVLVVKKSSGIKSFAQMKGQAIGAQSGSTAQIWL-DGSQKVIKPKS 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAII 231 ++++ + A R D + + ++ + L A + Sbjct: 175 KVLYDTIPSAFLDLNAGRIKGILLDETYAEYYIKHEADSKSYQVILNKEVPEDLFAVGMR 234 Query: 232 QGDTEWYNIVSWTHYAMVTAE 252 +GD ++ A + A+ Sbjct: 235 KGDKNLKKKINQAL-AELQAD 254 >gi|83716800|ref|YP_439849.1| glutamate/aspartate ABC transporter periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis E264] gi|83650625|gb|ABC34689.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia thailandensis E264] Length = 326 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 6/259 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ L + + +A L I + + V F+ + GF Sbjct: 31 MIHRPLAALAALFVGHAALTAAHAQTLDKIARTNQIVVSYRESAVPFSYLLTPHKAVGFS 90 Query: 61 VDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD A+ A+ + Y+P+ + R L +D+ +T T R + Sbjct: 91 VDVTEAIVDDVRKALRKPDLRTVYMPVTGQNRIPLLVDGTLDLECGSTTNTSAR--GKQV 148 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F ++ G + + I + L+ ++ G+T E L A ++ ++ Sbjct: 149 TFSTNYFYAGTRLMAKRGSHIGDYADLAHKAVATVGGSTNERALRHQLDAQHIDASVVLT 208 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + E R A D LY L+ P ++ + + P A + + D Sbjct: 209 KDYAEALKEVADDRAAALALDDVLLYGLRANTSDPDTWEVVGEALQIEPYACMVRKDDPA 268 Query: 237 WYNIVSWTHYAMVTAEELG 255 + +V T ++ + E Sbjct: 269 FKRLVDGTLTRLMKSGEFA 287 >gi|254563286|ref|YP_003070381.1| glutamate and aspartate ABC transporter periplasmic-binding protein [Methylobacterium extorquens DM4] gi|254270564|emb|CAX26567.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Methylobacterium extorquens DM4] Length = 303 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 86/235 (36%), Gaps = 7/235 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDPSKIQ 79 + L +K G + G V F+ + N G+ + C ++ A + D +++ Sbjct: 27 SGTLKKVKDTGTITIGYRDASVPFSYLDGNQKPVGYAFEICLKVADAVKAHLKLDTLEVR 86 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 P+ + R + + ID+ +T R+ F + F+ + KG+ Sbjct: 87 LNPVTSATRIPLIANGTIDLECGSTTNNADRQRQAA--FTNTHFLTATRFVAKRDKGLDK 144 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ +GTT + + A + + + E R DA+ D Sbjct: 145 TDDLKGRTVVSTSGTTNIRQINEINTARGLGMRILPAKDHAEAFLMVETGRADAFVTDDV 204 Query: 200 ALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L AL + P + I + S+ P + + D + +V A+ + E Sbjct: 205 LLAALVAGSKTPDAYAISSEAQSRPEPYGIMLRKDDPAFKAVVDAATAALYKSPE 259 >gi|153954995|ref|YP_001395760.1| lysine-arginine-ornithine-binding extracellular protein precursor [Clostridium kluyveri DSM 555] gi|146347853|gb|EDK34389.1| Predicted lysine-arginine-ornithine-binding extracellular protein precursor [Clostridium kluyveri DSM 555] Length = 266 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 87/253 (34%), Gaps = 19/253 (7%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K I I+ ST L +IKK G + G G +N Sbjct: 1 MKKITAIIITVIFGAILFTGCGSSTKKDTSSNLLENIKKSGKIVIGTEEGYPPMEFRDSN 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GFDVDF ++ + +L ++ LAL SK+ D + T R + Sbjct: 61 GQLVGFDVDFSNEVAKRLGVKAE---FLVMDFNGIILALNSKKFDAAIASISITDERRKT 117 Query: 114 LGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F GQ + ++ I V L G I + GTT E +A+ K Sbjct: 118 --TDFSTPYVVGGQVITVKNGREDIKGVDDLKGKVIACELGTTGE-NVANGIKGVK---E 171 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +++V E R DA D + E +L I+SK P+ A + Sbjct: 172 LKKYDKVTEAFQDMSIGRVDATIID--QQVGGYYIQKKKDEFKMLEGILSKEPMGVAYRK 229 Query: 233 GDTEWYNIVSWTH 245 D N V Sbjct: 230 EDDSLKNEVDKII 242 >gi|323698191|ref|ZP_08110103.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. ND132] gi|323458123|gb|EGB13988.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans ND132] Length = 274 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 93/253 (36%), Gaps = 21/253 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVKANG 54 K + L +L + S A S L I + G L+ G+ G + F G Sbjct: 2 KRIITLVAVLSLLMCAAMSAQAADIELAKKSTLEQIVQSGTLRVGLEAGYMPFEMTDKKG 61 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFDVD + ++ A+ ++ + L S + DI++ R +L Sbjct: 62 NVVGFDVDMVKEMAKAMGVK---LELVNTAWDGIIPGLLSGKYDIIASGMTINQER--NL 116 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLS--GASICVQAGTTTELTLADYFKAHNMK 170 + F GQ ++ KK I S L+ G I + GTT E F Sbjct: 117 KVNFANPYIIVGQTALIAKKSADKIKSWKDLNQAGVVITSKLGTTGEQAAKRLFPKA--- 173 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 FE ++ + DA D+ + + + V L + + PL AI Sbjct: 174 -TYKSFEMEDQAMLETMNGKADATVYDLPMTSIFYTQHGKDAGMVFLDEPFTYEPLGWAI 232 Query: 231 IQGDTEWYNIVSW 243 +GD ++ N ++ Sbjct: 233 NKGDPDFLNWLNN 245 >gi|315612794|ref|ZP_07887705.1| ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] gi|315314904|gb|EFU62945.1| ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] Length = 288 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 27/259 (10%) Query: 1 MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44 M K L F + + A + +IKK G L+ + Sbjct: 1 MKIIKPILTVFALAFTLIFVTACSSSGSSDASSGKTTAKARTIDEIKKSGELRIAVFGDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V +G ++G+D++ L+ + ++Y+ ++A R L S ++DI N Sbjct: 61 KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYVSVDAANRAEYLISNKVDITLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + K K I V +L G ++ V GTT E F Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKDKVIKDVKELEGKTLIVTKGTTAETY----F 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + ++ + +++ + A R DA++ D + + A + V + + Sbjct: 172 EKNHPEVKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGYEVGISSLGDPD 229 Query: 225 PLAPAIIQGDTEWYNIVSW 243 +APA+ +G+ E + ++ Sbjct: 230 TIAPAVQKGNQELLDYINQ 248 >gi|323351209|ref|ZP_08086865.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis VMC66] gi|322122433|gb|EFX94144.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis VMC66] Length = 270 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 11/259 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72 + + S+ + + I+KRG L G+ + F + + + G ++D + ++ + Sbjct: 22 AVPAQADSSTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG 81 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 I Y+P+ A+ R L + Q+D++ T R+ F Y D GF+++ Sbjct: 82 VK---INYVPVTAQTRGPLLDNGQVDMVIATFTITDERKEI--YNFTTPYYTDASGFLVN 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K I+ V L+ +I V G+ T+ L + + + + + E+ + RAHR D Sbjct: 137 KSSKITDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRID 196 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A + D S L + IL K+ + +T+ + V Sbjct: 197 AISVDKSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKWKEDS 251 Query: 253 ELGITQKNINQVSKDTTNP 271 L + +T+ Sbjct: 252 SLQKIYDKYDLKPSTSTDD 270 >gi|270292247|ref|ZP_06198461.1| CjaA protein [Streptococcus sp. M143] gi|270279293|gb|EFA25136.1| CjaA protein [Streptococcus sp. M143] Length = 288 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 27/259 (10%) Query: 1 MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44 M K L F + + A + +IKK G L+ + Sbjct: 1 MKIIKPILTVFALAFALIFVTACSSGGSSDASSGKATAKARTIDEIKKSGELRIAVFGDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V +G ++G+D++ L+ + ++Y+ ++A R L S ++DI N Sbjct: 61 KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYVSVDAANRAEYLISNKVDITLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + K K I V +L G ++ V GTT E F Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKDKVIKDVKELEGKTLIVTKGTTAETY----F 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + ++ + +++ + A R DA++ D + + A + V + + Sbjct: 172 EKNHPEVKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGYEVGITSLGDPD 229 Query: 225 PLAPAIIQGDTEWYNIVSW 243 +APA+ +G+ E + ++ Sbjct: 230 TIAPAVQKGNQELLDFINK 248 >gi|319946728|ref|ZP_08020962.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus australis ATCC 700641] gi|319746776|gb|EFV99035.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus australis ATCC 700641] Length = 285 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 24/259 (9%) Query: 1 MY--KDFFVSI-LCLIILFFTSFSTN----------ASILGDIKKRGFLKCGINTGLVGF 47 M K V L +LF T+ ++ A + +IKK G L+ + F Sbjct: 1 MKFIKPILVLFTFALALLFITACGSSKSSSSSTGSKARTIEEIKKSGELRIAVFGDKKPF 60 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 V +G ++G+D++ L+ + P +Y+ ++A R L S ++DI N T Sbjct: 61 GYVDNDGSYQGYDIELGNQLAKDLGVKP---KYVSVDAANRAEYLISNKVDITLANFTVT 117 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ + F G + K K I+ V QL G ++ V GTT E F+ + Sbjct: 118 DERKK--QVDFALPYMKVSLGVVSPKDKVITDVKQLEGKTLIVTKGTTAETY----FEKN 171 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + +++ + A R DA++ D + + A + V + + +A Sbjct: 172 HPEVKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGYEVGITSLGDPDTIA 229 Query: 228 PAIIQGDTEWYNIVSWTHY 246 PA+ +G+ E + ++ Sbjct: 230 PAVQKGNKELLDFINDDIQ 248 >gi|317182426|dbj|BAJ60210.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori F57] Length = 277 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 8 KVWGLFLVLITLVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 68 DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G I K I ++ +L + V GTT + F + + FE+ Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + A D + L A T P + + + K +APAI +G+ + Sbjct: 181 TETFLALLNDKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238 Query: 240 IVSWTHYAMVTAEELG 255 ++ ++++++ L Sbjct: 239 WLNNEMDSLISSDFLK 254 >gi|251790533|ref|YP_003005254.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] gi|247539154|gb|ACT07775.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] Length = 297 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 6/235 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD----FCRALSSAIFDDPSKIQY 80 L +K G + G V F+ G+ A+ + +++ Sbjct: 27 GTLKKVKDNGVIVIGHRESSVPFSYYDNQQKVVGYSQAYSDKIVEAVRKKLDAPNLQVKL 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ D+ +T L R +AF + G + K G+ Sbjct: 87 IPITSQNRIPLLQNGTYDLECGSTTNNLER--QQQVAFSDTIFIIGTRLLTKKDSGLKDF 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 S+L+G ++ V +GTT+E+ L + + I + + + R A+ D + Sbjct: 145 SELTGKAVVVTSGTTSEVLLNKMNEEKKLNLRIISAKDHGDSFRTLESGRAVAFMMDDAL 204 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + P E VI S+ + + D ++ +V T + T+ E Sbjct: 205 LAGERAKAKTPDEWVITGTPQSREAYGCMLRKDDPQFKQLVDATISQLQTSGEAE 259 >gi|83750017|ref|ZP_00946953.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|207723706|ref|YP_002254104.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|207743865|ref|YP_002260257.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] gi|83723317|gb|EAP70559.1| Glutamate/aspartate-binding protein [Ralstonia solanacearum UW551] gi|206588910|emb|CAQ35872.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|206595265|emb|CAQ62192.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] Length = 308 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 88/241 (36%), Gaps = 8/241 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFD 73 + + + L IK+ G + G + F+ ++G+ G+ + + + Sbjct: 28 GAQAQSNDTLAKIKQSGVISVGYRESSIPFSYEASSGNVTGYSQEISNLIVDGVKKTLGL 87 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++ P+ ++ R LQ+ ID +T L R+ + F + G ++ K Sbjct: 88 SSLQVKLTPITSQNRIPLLQNGTIDFECGSTTNNLERQKQVA--FSNNIFIYGMLMLVKK 145 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERVEEIDAAYRAHRC 191 GI L G ++ AGTT + L K + I+ + + + R Sbjct: 146 DSGIKDFPDLKGKTVVTTAGTTEDRILQKMNGEAKDADKMNLILAKDHGQAFLTLESGRA 205 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 A+ D LY + ++ V+ + A + + D + + ++T+ Sbjct: 206 VAFVMDEPLLYGERTKAKNQADWVVTGTPLQTETYACMMRKDDPAFKKVADDVIADLMTS 265 Query: 252 E 252 Sbjct: 266 G 266 >gi|227432436|ref|ZP_03914424.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351802|gb|EEJ42040.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 284 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 92/268 (34%), Gaps = 27/268 (10%) Query: 1 MYKD---------FFVSILCLIILFFTSFSTNA----------SILGDIKKRGFLKCGIN 41 M K F++++ + L ++ S + IK+ + G++ Sbjct: 4 MKKKIVVNSIVGILFIALVVMAALSLSNNSQKSKGTEQTVVKTDQWSRIKREKQITIGLD 63 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 V +G GFDVD A+ ++ K+++ P++ + L + ID + Sbjct: 64 DTFVPMGFRDKSGKLVGFDVDLATAVFKSLG---IKVKWQPIDWSMKETELNTGNIDAIW 120 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 T RE +AF + Q + KK I+ S + + Q ++ + T A Sbjct: 121 NGYTITDDREK--KVAFSTPYHKATQVLVTLKKSNINKFSDMQDKVLGDQTASSGDQTFA 178 Query: 162 DY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 Y K + I ++ ++ A+R D D P+++ I Sbjct: 179 QYPKVLKQYVKDQKVIGYDTFDKAFNDLNANRIDGLLIDEDYARYYVAHQSNPNDYTITT 238 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + A + D + V+ Sbjct: 239 GGFPVNDNAVGFRKADKKLRQAVNKELK 266 >gi|157150751|ref|YP_001450271.1| amino acid transport protein [Streptococcus gordonii str. Challis substr. CH1] gi|262282452|ref|ZP_06060220.1| amino acid transporter [Streptococcus sp. 2_1_36FAA] gi|157075545|gb|ABV10228.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus gordonii str. Challis substr. CH1] gi|262261743|gb|EEY80441.1| amino acid transporter [Streptococcus sp. 2_1_36FAA] Length = 284 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 105/255 (41%), Gaps = 23/255 (9%) Query: 1 MY--KDFFVSI-LCLIILFFTSFSTNAS---------ILGDIKKRGFLKCGINTGLVGFA 48 M K + L L ++F T+ + + + +IKK G L+ + F Sbjct: 1 MKLIKSILTVMTLALALVFITACGASKNSNASSSKARTIDEIKKSGELRIAVFGDKKPFG 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V +G ++G+D++ L+ + ++Y+ ++A R L S ++DI N T Sbjct: 61 YVDNDGSYQGYDIELGNQLAKDLGVK---VKYVSVDAANRAEYLISNKVDITLANFTVTD 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R+ + F G + K I V +L G ++ V GTT E F+ ++ Sbjct: 118 ERKK--QVDFALPYMKVSLGVVSPKDALIKDVKELKGKTLIVTKGTTAETY----FEKNH 171 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + +++ + A R DA++ D + + A + V + + +AP Sbjct: 172 PEVKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGYEVGITSLGDPDTIAP 229 Query: 229 AIIQGDTEWYNIVSW 243 A+ +G+ E + ++ Sbjct: 230 AVQKGNKELLDFINK 244 >gi|307708866|ref|ZP_07645326.1| ABC transporter substrate-binding protein [Streptococcus mitis SK564] gi|307620202|gb|EFN99318.1| ABC transporter substrate-binding protein [Streptococcus mitis SK564] Length = 288 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 103/259 (39%), Gaps = 27/259 (10%) Query: 1 MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44 M K + L F + + A + +IKK G L+ + Sbjct: 1 MKLLKPLLTVLALAFALIFVTACSSGGNGGASSGKTTAKARTIDEIKKSGELRIAVFGDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V +G ++G+D++ L+ + + ++Y+ ++A R L S ++DI N Sbjct: 61 KPFGYVDNDGSYQGYDIELGNQLAQDLGVN---VKYVSVDAANRAEYLISNKVDITLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + K I+ V QL G ++ V GTT E F Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + ++ + +++ + A R DA++ D + + A + V + + + Sbjct: 172 EKNHPEVKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGNPD 229 Query: 225 PLAPAIIQGDTEWYNIVSW 243 +A A+ +G+ E + ++ Sbjct: 230 TIAAAVQKGNQELLDFINK 248 >gi|46200782|ref|ZP_00056492.2| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Magnetospirillum magnetotacticum MS-1] Length = 294 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 98/235 (41%), Gaps = 6/235 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDPSKIQY 80 L +K+ G + G+ + + G G+ VD CR ++ A + +++ Sbjct: 17 PTLDKVKRTGSIVLGVRETSYPLSYLDQTGQPIGYHVDICRRIAEAVKTQLGLSSLEVRT 76 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + +K R + ID+ +T R+ + F P TY + K I+ + Sbjct: 77 EVVTSKTRIPKMVDGAIDLECGSTTNNAARQTQVA--FAPTTYVASVRIAVKKASRITKL 134 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 +QL G ++ AG+T+ L + ++ + E + + A+ D + Sbjct: 135 AQLDGKAVVTTAGSTSVQLLKARVQGRDINVIEVFGNDHAESFKMLESDQAAAFVMDDNL 194 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L L ++ P ++ IL ++ P+A + + D + +V T AM+T+ E+G Sbjct: 195 LAGLIASSSAPKDYEILAQTLNTEPIAIMLRKNDPAFKALVDQTVKAMMTSGEVG 249 >gi|298290398|ref|YP_003692337.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296926909|gb|ADH87718.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 274 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 90/245 (36%), Gaps = 9/245 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + ++I + + + +A L D+K +G L G+ + + G+ GF+VD Sbjct: 2 RTSILTIAASLAMTLGIGAASADTLADVKAKGTLTIGVKNDYPPYGFLNDKGEIVGFEVD 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + ++ + K + +P+ A R L S +IDI+ T R + F Sbjct: 62 LGKYIAKELLGPEGKFELVPVVAANRIEFLNSGRIDIILATLGVTEERGKV--IDFSEYY 119 Query: 123 YF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G I K S +L G ++C G+ L + ++ F+ E Sbjct: 120 VSAPGPSVIAPKAATFSKWEELKGLTLCGIQGSYYNKHL-----SGDLGIQLTAFKTQPE 174 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + +RC + D L K + + I D P A I + D + + V Sbjct: 175 AYRALKDNRCVGFVFDDMTLR-QKTEEADWAGYKIAVDPYEYIPQAAGIRKNDVAFRDAV 233 Query: 242 SWTHY 246 + Sbjct: 234 NKAIT 238 >gi|206563592|ref|YP_002234355.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] gi|198039632|emb|CAR55600.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] Length = 298 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 77/234 (32%), Gaps = 6/234 (2%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD- 74 L IK G + GI V F+ G+ D + + + Sbjct: 18 GTAHAQALTGTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIGYSRDIASRIIDQLKTEL 77 Query: 75 ---PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 ++ +P+ ++ R LQ+ ID +T TL R+ F + G F Sbjct: 78 NLPNLAVKEIPITSQNRIPLLQNGTIDFECGSTTNTLERQKQAA--FSNSIFLYGIRFST 135 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 K G+ + L+G ++ AGT+ E L + M I + E R Sbjct: 136 RKDSGVKDFADLAGKTVATTAGTSDERLLRKLNEEKAMNMTIISAKDHAEAFMNVTTGRA 195 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A+ D LY + P + + + A + + D + +V Sbjct: 196 VAFVMDEPLLYGEIAKDRNPGAYTVTGTPLVHENYACMMRRDDPPFKRVVDGVI 249 >gi|149189496|ref|ZP_01867780.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio shilonii AK1] gi|148836653|gb|EDL53606.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio shilonii AK1] Length = 264 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 96/255 (37%), Gaps = 11/255 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V+ + L +S S A L DI++RG++K G++ G + G+D Sbjct: 1 MKFKALVATILASALAISSTSAFAGKLEDIRERGYIKIGVSLGGEPIGFRDQKNNPAGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + L+ + + ++ ++ R L S Q+D + N TL R + F Sbjct: 61 VDLAKRLAEKLGVEA---RFTDVHGDARVSMLFSDQLDAVIGNMSATLERAK--SVNFSI 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G + K + I+S+ L+G + V G+T E L Sbjct: 116 PYARAGLRIVHQKDQDINSLQDLAGKRVVVGRGSTGEAFLKREVPEA---ELVYTDNFAP 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + R R DA D S + L N V LP + S P+A + +GD E+ Sbjct: 173 DGVLLLRQGRVDAGIEDSSLIDYLATNNPN---LVTLPGLHSNDPIAIGVRKGDAEYLRW 229 Query: 241 VSWTHYAMVTAEELG 255 + + + Sbjct: 230 MDMFVSDYINSGAYE 244 >gi|325690800|gb|EGD32801.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK115] gi|325696131|gb|EGD38022.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK160] Length = 270 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 99/259 (38%), Gaps = 14/259 (5%) Query: 17 FTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72 ++S + I+KRG L G+ + F + + + G ++D + ++ + Sbjct: 22 AAPAQADSSTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG 81 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 I Y+P+ A+ R L + Q+D++ T R+ F Y D GF+++ Sbjct: 82 VK---INYVPVTAQTRGPLLDNGQVDMVIATFTITDERKEI--YNFTTPYYTDASGFLVN 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K I+ V L+ +I V G+ T+ L + + + + + E+ + RAHR D Sbjct: 137 KSSKITDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRID 196 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A + D S L + IL K+ + +T+ + V Sbjct: 197 AISVDKSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDSLISKWKEDG 251 Query: 253 ELGITQKNINQVSKDTTNP 271 L N +T+ Sbjct: 252 SLQKLYDKYNLKPSASTDD 270 >gi|302060676|ref|ZP_07252217.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato K40] Length = 310 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 83/241 (34%), Gaps = 7/241 (2%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDF----CRALSSAIFDD 74 + L IK+ G + G + F+ + A+G G+ D A+ + Sbjct: 25 AAELTGTLKKIKESGTITLGHRDASIPFSYIADASGIPMGYSHDIQLKIVEAIKKELDMP 84 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K++Y + ++ R +Q+ +D+ +T + R + F + G + K Sbjct: 85 DLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVDFSIGIFEVGTRLLSKKD 142 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 L G ++ AGTT+E L M + I + E + R A+ Sbjct: 143 SSYKDFDDLKGKNVVTTAGTTSERILKTMNADKQMGMNVISAKDHGESFQMLESGRAVAF 202 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L +P + + S + +GD + V A + ++ Sbjct: 203 MMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGDI 262 Query: 255 G 255 Sbjct: 263 N 263 >gi|330808725|ref|YP_004353187.1| putative amino acid ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376833|gb|AEA68183.1| putative amino acid ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 282 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 96/248 (38%), Gaps = 4/248 (1%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + S L + +RG L G + + A+G +GFD+D R Sbjct: 12 VFLFAATTAAMGVAQAADSKLDSVLQRGKLIVGTGSTNAPWHFQGADGKLQGFDIDIARM 71 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ +F+DP K++++ ++ R L + ++D+ + T R + +AF Y +G Sbjct: 72 VAKGLFNDPEKVEFVVQSSDARIPNLLTDKVDMSCQFITVTASR--AQQVAFTLPYYREG 129 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 G ++ + L A V + + K ++ V+ + A Sbjct: 130 VGLLLPANSKYKEIEDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAV 189 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + R DA D S+ L P + S A A+ +GD +W N V+ T + Sbjct: 190 NSGRADAAATDQSS--VKYLMVQNPGRYRSPAYAWSPQTYACAVKRGDQDWLNFVNTTLH 247 Query: 247 AMVTAEEL 254 +T E Sbjct: 248 EAMTGVEF 255 >gi|307706279|ref|ZP_07643092.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] gi|307618312|gb|EFN97466.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] Length = 288 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 27/259 (10%) Query: 1 MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44 M K + L F + + A + +IKK G L+ + Sbjct: 1 MKLFKPLLTVLALAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V +G ++G+D++ L+ + ++Y+ ++A R L S ++DI N Sbjct: 61 KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYVSVDAANRAEYLISNKVDITLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + K I+ V QL G ++ V GTT E F Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + ++ + +++ + A R DA++ D + + A + V + + Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229 Query: 225 PLAPAIIQGDTEWYNIVSW 243 +A A+ +G+ E + ++ Sbjct: 230 TIAAAVQKGNQELLDFINK 248 >gi|217967439|ref|YP_002352945.1| extracellular solute-binding protein family 3 [Dictyoglomus turgidum DSM 6724] gi|217336538|gb|ACK42331.1| extracellular solute-binding protein family 3 [Dictyoglomus turgidum DSM 6724] Length = 257 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 92/246 (37%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +S L +++ + A + IKK G LK G + F ++ + GFD Sbjct: 1 MRKGIIISFLFFLLVLYPVLGAGA--VERIKKVGVLKVGSDVAYAPFEFMEGD-KPVGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ A+ I + AL++K+ DI+ T R+ + F Sbjct: 58 IDIAQEIAKALGVKLQVIN---TSFDGIIAALKAKKFDIIISAMTITEERKK--EIDFSI 112 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y GQ ++ + I S L + VQ GTT ELT +K +E + Sbjct: 113 PYYDSGQIIVVRSENKDIKSEKDLKDKVVGVQLGTTGELTAKKLKDQIGIK-EIRSYETI 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E R DA D+ +L + + P + + A+ + D + Sbjct: 172 PEAFMDLELGRLDAVINDLP--VSLYYSKNNPK-LKCVGKPFTIEQYGIAVRKEDKDLLK 228 Query: 240 IVSWTH 245 ++ Sbjct: 229 KINEIL 234 >gi|264676713|ref|YP_003276619.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni CNB-2] gi|262207225|gb|ACY31323.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni CNB-2] Length = 303 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 101/248 (40%), Gaps = 4/248 (1%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKGFDVDFCR 65 + + + + + S L ++K G + G+ A + AN + G+ V+ C Sbjct: 14 ALVAAMAASGVQAQTASGSTLEKLQKTGKVVIGVRESSAPMAYAIGANHRFTGYHVELCE 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 + + I +KI+Y+ + A+ +Q+ +D+ T L R+ ++F TY Sbjct: 74 KVLAQI-APSAKIEYMAITAQNTMPLVQNGTVDLGCGPTTNNLSRQK--QVSFAVTTYVS 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + ++S QL G ++ AGTT L Y +N+K + + E Sbjct: 131 QVRMAVRADSPVTSFKQLDGKTVAASAGTTAVQLLRKYSHDNNVKLPTQLGKDHFESFLM 190 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + R DA+ D + L + + P + I+ + + P+A + + D + V Sbjct: 191 LESGRADAFVLDDNLLAGVIANSKDPRGYKIVGEALGSEPIALLMRKDDPGFKKAVDDAL 250 Query: 246 YAMVTAEE 253 M+ + E Sbjct: 251 VRMMKSGE 258 >gi|239814179|ref|YP_002943089.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239800756|gb|ACS17823.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 306 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 50/234 (21%), Positives = 102/234 (43%), Gaps = 5/234 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81 L +++ G + G V F+ + A + G+ ++ CR L +AI + I+++ Sbjct: 38 GTLAKVRESGTIAIGYRESSVPFSFLNARQEPVGYSIELCRELVTAIEEAVNKSLAIKWV 97 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ + R A++ +D+ +T L R+ ++F P + G ++ K I S Sbjct: 98 PVTSDSRIDAVERGTVDLECGSTTSNLERQKR--VSFSPTIFVSGTKVLVKKGSPIKSFR 155 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + V AGTT E TL + + + V + ++ + DA+ D L Sbjct: 156 DLAGKRVAVTAGTTNEKTLRELSQKFRLGIDLRVARDHADSFGLVKSGQADAFATDDVLL 215 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 Y L + +++ ++ D +S P +GD + +++ T + E+ Sbjct: 216 YGLIARDAAKAQYEVVGDYLSYDPYGIMYRKGDAQLAKVINDTFQVLAQDGEIE 269 >gi|300703458|ref|YP_003745060.1| glutamate/aspartate ABC transporter periplasmic binding subunit [Ralstonia solanacearum CFBP2957] gi|299071121|emb|CBJ42433.1| glutamate/aspartate ABC transporter,periplasmic binding subunit [Ralstonia solanacearum CFBP2957] Length = 308 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 88/241 (36%), Gaps = 8/241 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFD 73 + + + L IK+ G + G + F+ ++G+ G+ + + + Sbjct: 28 GAQAQSNDTLAKIKQSGVISVGYRESSIPFSYEASSGNVTGYSQEISNLIVDGVKKTLGL 87 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++ P+ ++ R LQ+ ID +T L R+ + F + G ++ K Sbjct: 88 SSLQVKLTPITSQNRIPLLQNGTIDFECGSTTNNLERQKQVA--FSNNIFIYGMLMLVKK 145 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERVEEIDAAYRAHRC 191 GI L G ++ AGTT + L K + I+ + + + R Sbjct: 146 DSGIKDFPDLKGKTVVTTAGTTEDRILQKMNGEAKDADKMNLILAKDHGQAFLTLESGRA 205 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 A+ D LY + ++ V+ + A + + D + + ++T+ Sbjct: 206 VAFVMDEPLLYGERTKAKNQADWVVTGTPLQTETYACMMRKDDPAFKKVADDVIADLMTS 265 Query: 252 E 252 Sbjct: 266 G 266 >gi|326318773|ref|YP_004236445.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375609|gb|ADX47878.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 300 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 102/243 (41%), Gaps = 7/243 (2%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC-RALS---SAIF 72 +F+ + L IK G + G+ G + +G + GF D C R ++ + Sbjct: 16 GGAFAQSNDTLAKIKASGTITEGVRESS-GLSYTLGDGKYTGFHYDVCARVIADVQKQLG 74 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 + +Y P+ ++ R +Q+ +DI +T R+ + F TY + + Sbjct: 75 LAKLETKYQPVTSQNRIPLVQNGTVDIECGSTTNNQARQKDVA--FAVTTYVEEVRIAVK 132 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 GIS + L+G +I GTT+ TL +A + + + + + + R D Sbjct: 133 ANSGISGIKDLNGKTIATTTGTTSVQTLRKNKRADGLTFKEVFGKDHSDSFLLLESGRAD 192 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A+ D S L + + P++ I+ + +S P+A I + D + V + M+ + Sbjct: 193 AFIMDGSILASNIAKSKAPNDFKIVGETLSVEPIAIMIRKDDPAFKKAVDDSLKGMMKSG 252 Query: 253 ELG 255 E+ Sbjct: 253 EMA 255 >gi|188527957|ref|YP_001910644.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori Shi470] gi|188144197|gb|ACD48614.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori Shi470] Length = 277 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 8 KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 68 DVIIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G I K I ++ +L + V GTT + F + + FE+ Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A ++ A D + L A T P + + + K +APAI +G+ + Sbjct: 181 TETFLALLDNKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238 Query: 240 IVSWTHYAMVTAEELG 255 + ++++++ L Sbjct: 239 WLDNEMDSLISSDFLK 254 >gi|317178527|dbj|BAJ56315.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori F30] Length = 277 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 113/256 (44%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 8 KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGY 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 68 DVVIAKRMALDLLGDENKIEFIPIEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G I K I ++ +L + V GTT + F + + FE+ Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A ++ A D + L A T P + + + K +APAI +G+ + Sbjct: 181 TETFLALLNNKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238 Query: 240 IVSWTHYAMVTAEELG 255 ++ ++++++ L Sbjct: 239 WLNNEMDSLISSDFLK 254 >gi|317011370|gb|ADU85117.1| glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) [Helicobacter pylori SouthAfrica7] Length = 277 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 17/263 (6%) Query: 1 MYK----DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M + L LI L F + S + L IK+RG LK G+ + F V + Sbjct: 1 MKNNKLFKVWGLFLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G ++G+DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE Sbjct: 61 KGQYQGYDVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREA 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F G I K I ++ +L + V GTT + F + Sbjct: 121 V--VDFAKPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIK 173 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + FE+ E A ++ A + D + L A P + + + K +APAI + Sbjct: 174 LLKFEQNTETFLALLNNKAIALSHDNTLLLAWAKQ--HPEFKLGITSLGDKDVIAPAIKK 231 Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255 G+ + ++ ++++++ L Sbjct: 232 GNPKLLEWLNNEIDSLISSDFLK 254 >gi|282851032|ref|ZP_06260406.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus gasseri 224-1] gi|282557984|gb|EFB63572.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus gasseri 224-1] Length = 252 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 93/251 (37%), Gaps = 14/251 (5%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M + +IL + L ++ ++K+ + G+ F + G Sbjct: 1 MKRKLRIFSLFTILLSVFLLSACRKNTRNVYQEVKRSNEITWGVKADTRLFGLMSIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GF+VD AL+ + +K ++ AK + L++ ID + T R+ Sbjct: 61 IEGFEVDLANALTKEMLGKDAKANFVQTTAKTKIPLLKNGNIDAVLAAMTITPERKK--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F ++ GQ ++ + I +V L+G + GTT + + + Sbjct: 119 IDFSEPYFYAGQSLLVKEDSTIKNVQDLNGKTALAVKGTTAVANVKKFAPKAK----VLE 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + A +A + A T D L + N + ++ + P A+ +G Sbjct: 175 FDDYGQAFTALKAGQGQAMTTDNGLLAGIATENKG---YKLVGGTYTNEPYGIAVNKGQK 231 Query: 236 EWYNIVSWTHY 246 + N ++ Sbjct: 232 QMKNAINRALN 242 >gi|325694844|gb|EGD36749.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK150] Length = 270 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 11/259 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72 + + ST + + I+KRG L G+ + F + + + G ++D + ++ + Sbjct: 22 AVPAQADSTTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG 81 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 I Y+P+ A+ R L + Q+D++ T R+ F Y D GF+++ Sbjct: 82 VK---INYVPVTAQTRGPLLDNGQVDMVIATFTITDERKEI--YNFTTPYYTDASGFLVN 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K I+ V L+ +I V G+ T+ L + + + + + E+ + RAHR D Sbjct: 137 KSSKITDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRID 196 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A + D S L + IL K+ + +T+ + V Sbjct: 197 AISVDKSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKWKEDG 251 Query: 253 ELGITQKNINQVSKDTTNP 271 L + +T+ Sbjct: 252 SLQKLYDKYDLKPSASTDD 270 >gi|187932687|ref|YP_001885295.1| amino acid ABC transporter, substrate-binding protein [Clostridium botulinum B str. Eklund 17B] gi|187720840|gb|ACD22061.1| amino acid ABC transporter, substrate-binding protein [Clostridium botulinum B str. Eklund 17B] Length = 268 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 88/251 (35%), Gaps = 10/251 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K VS + I + + +N + + G++ V +G+ GFDV Sbjct: 7 KKLLIVSCVATIGVNLVACKSNKQ--ESASSKNEIIIGMDDTFVPMGFKDGSGETVGFDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +A+ + + +++ ++ + L + ID++ T R+ + F + Sbjct: 65 DLAKAVGEKLNKE---VKFQSIDWSMKESELNNGNIDLIWNGYSITDERKE--NVEFSKV 119 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD--YFKAHNMKYHPIVFERV 179 + Q I I+S + L A + Q ++ + + + + FE Sbjct: 120 YLNNRQVIITLADSKINSKNDLINAKVGAQNQSSAVDAIKADSDMMSKFHGGNVVTFETN 179 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R DA D L ++ IL D A I +GDT + Sbjct: 180 NDALIDLESGRIDAVVADE-ILAKYYTNERGKEKYKILNDDFGTEDYAVGIKKGDTSFVQ 238 Query: 240 IVSWTHYAMVT 250 + +++ Sbjct: 239 EFNNALNSVIE 249 >gi|325684596|gb|EGD26755.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 281 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 97/247 (39%), Gaps = 11/247 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDF 63 F +L ++L S S ++S +K+ + G+ F+ + +G GF+VD Sbjct: 11 FMAVLLLSLVLTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDSGKATGFEVDL 70 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 RA++ I K++ ++ K R + L+ +D + T R + F + Sbjct: 71 ARAITKQILGPKGKMKIEYISEKSRIMDLKIGNVDAVMATMTNTPDRRKI--INFSDTYF 128 Query: 124 FDGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G+ I+ KK ++S+ + + G+T + + Y I ++ Sbjct: 129 MAGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAPK----SRVIFYDDYGS 184 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A ++ + +A D + L L + +LPD + P I +G+ ++ V Sbjct: 185 CYNALKSGKANAMVSDNAVLAGLISDDKDK--FKMLPDTFTVEPYGIGIKKGEDKFTAEV 242 Query: 242 SWTHYAM 248 + + Sbjct: 243 NQALKVL 249 >gi|283956264|ref|ZP_06373744.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 1336] gi|283791984|gb|EFC30773.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 1336] Length = 259 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 10/245 (4%) Query: 2 YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K + + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 4 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + +D + T R+ F Sbjct: 64 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 121 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + + K + F Sbjct: 122 SEPYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R DA++ D S L ILPD + D + Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 236 Query: 239 NIVSW 243 V Sbjct: 237 KYVDD 241 >gi|219855438|ref|YP_002472560.1| hypothetical protein CKR_2095 [Clostridium kluyveri NBRC 12016] gi|219569162|dbj|BAH07146.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 276 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 87/253 (34%), Gaps = 19/253 (7%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K I I+ ST L +IKK G + G G +N Sbjct: 11 MKKITAIIITVIFGAILFTGCGSSTKKDTSSNLLENIKKSGKIVIGTEEGYPPMEFRDSN 70 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GFDVDF ++ + +L ++ LAL SK+ D + T R + Sbjct: 71 GQLVGFDVDFSNEVAKRLGVKAE---FLVMDFNGIILALNSKKFDAAIASISITDERRKT 127 Query: 114 LGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F GQ + ++ I V L G I + GTT E +A+ K Sbjct: 128 --TDFSTPYVVGGQVITVKNGREDIKGVDDLKGKVIACELGTTGE-NVANGIKGVK---E 181 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +++V E R DA D + E +L I+SK P+ A + Sbjct: 182 LKKYDKVTEAFQDMSIGRVDATIID--QQVGGYYIQKKKDEFKMLEGILSKEPMGVAYRK 239 Query: 233 GDTEWYNIVSWTH 245 D N V Sbjct: 240 EDDSLKNEVDKII 252 >gi|108563536|ref|YP_627852.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori HPAG1] gi|107837309|gb|ABF85178.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter pylori HPAG1] Length = 277 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F + S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 8 KVWGLFLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 68 DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G + K I ++ +L + V GTT + F + + FE+ Sbjct: 126 KPYMKVALGVVS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A ++ A D + L A T P + + + K +APAI +G+ + Sbjct: 181 TETFLALLNNKAIALAHDNTLLLAW--TKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238 Query: 240 IVSWTHYAMVTAEELG 255 ++ ++++++ L Sbjct: 239 WLNNEIDSLISSDFLK 254 >gi|332041344|gb|EGI77706.1| extracellular solute-binding protein family 3 [Hylemonella gracilis ATCC 19624] Length = 280 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 63/250 (25%), Positives = 106/250 (42%), Gaps = 14/250 (5%) Query: 1 MYKDFFVSILC---LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DW 56 M K F +++ IL + + +A L DIKK+G L GI + V + Sbjct: 1 MRKRTFNTLIASAFAAILSLGAVTAHADQLADIKKKGVLVFGILGIDEPNSFVDPKTRQY 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G+++D A++ I + + R LQ +D+L+ + RE + Sbjct: 61 IGYEIDLANAIAQKIGVKAE---FKQVAVAARIPELQQGHVDLLAASLTHNKEREAL--I 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G ++ KK GI+SV QL G + G T E L + F Sbjct: 116 DFGLTHFVTGSKVLVTKKSGITSVQQLGGKKVVTVKGGTQEPNLKRAVPTA----EVVTF 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDT 235 E ++ A + + AY D S+LY+ L + ++V+LP+ ++ PLA I +G+T Sbjct: 172 ESTQQAFLALQQGKGVAYVNDESSLYSDVLKLGPKAKDYVVLPENLNVEPLAIGIKKGET 231 Query: 236 EWYNIVSWTH 245 +V T Sbjct: 232 ALKAVVDQTL 241 >gi|146311435|ref|YP_001176509.1| extracellular solute-binding protein [Enterobacter sp. 638] gi|145318311|gb|ABP60458.1| amino acid ABC transporter substrate-binding protein, PAAT family [Enterobacter sp. 638] Length = 276 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 96/245 (39%), Gaps = 11/245 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFD 60 Y+ +++ L S A L DIK G +K F + D G+D Sbjct: 8 YQQLVLALGLLTAGGILSTPAQADQLADIKAAGVVKVATFDANPPFGSIDPKTHDIVGYD 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF +AL+ + ++ + N R LQS + D++ + T R + + F Sbjct: 68 VDFAKALAKTLGVK---LELVATNPANRIPLLQSGKADLIVADITITPER--AQVIDFST 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + GQ F++ K + S A I GTT E L F + + ++ + Sbjct: 123 PYFVTGQQFLVPVKS-ADKLDDYSKARIGAVKGTTGEQALHQRFP----QSRVLSYDDIP 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A R A T D + L L + ILPD++SK + + +G+T N+ Sbjct: 178 LALTALRNGNVQAITQDSTILAGLLSQAPDKANFKILPDLLSKEEIGVGVKKGETALLNV 237 Query: 241 VSWTH 245 V+ Sbjct: 238 VNTEL 242 >gi|73540829|ref|YP_295349.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72118242|gb|AAZ60505.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 297 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 96/259 (37%), Gaps = 7/259 (2%) Query: 1 MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M ++L L + A L I + V F+ + A GF Sbjct: 1 MKSIPVVAAVLIAAGLPLGASDVYAQTLEKIASSDKITVSYREAAVPFSYLLAPHKAVGF 60 Query: 60 DVDFCRALSS----AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 VD A+ + K+ Y+P+ + R L S D+ +T T R + Sbjct: 61 SVDLTEAIIDDVRSRLKKPNLKVDYVPVTGQNRIPMLVSGTYDLECGSTTNTSARGKEVA 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F ++ G + K GI + S L+ ++ AG+T E L+ Y HN+ I Sbjct: 121 --FSINVFYAGTRLLTKKNSGIKNYSDLTKKTVASTAGSTNEKLLSQYSADHNLDIQLIS 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + R A D L+ L+ + PS I+ D + P A + + DT Sbjct: 179 GKDYADAMQLVLNDRAVALALDDVLLFGLRANSRSPSALEIVGDTLQVEPYACMVRKDDT 238 Query: 236 EWYNIVSWTHYAMVTAEEL 254 E+ +V T ++ + E Sbjct: 239 EFKKLVDGTITRLMKSGEF 257 >gi|322376967|ref|ZP_08051460.1| CjaA protein [Streptococcus sp. M334] gi|321282774|gb|EFX59781.1| CjaA protein [Streptococcus sp. M334] Length = 288 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 27/259 (10%) Query: 1 MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44 M K + L F + + A + +IKK G L+ + Sbjct: 1 MKLLKPLLTVLALAFALIFVTACSSGGNASSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V +G ++G+D++ L+ + ++Y+ ++A R L S ++DI N Sbjct: 61 KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYVSVDAANRAEYLISNKVDITLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + K I+ V QL G ++ V GTT E F Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + + + +++ + A R DA++ D + + A + V + + + Sbjct: 172 EKKHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGNPD 229 Query: 225 PLAPAIIQGDTEWYNIVSW 243 +A A+ +G+ E + ++ Sbjct: 230 TIAAAVQKGNQELLDFINK 248 >gi|299529534|ref|ZP_07042971.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni S44] gi|298722397|gb|EFI63317.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni S44] Length = 303 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 102/248 (41%), Gaps = 4/248 (1%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKGFDVDFCR 65 + + + +T+ S L ++K G + G+ A + AN + G+ V+ C Sbjct: 14 ALVAAMAASGVQAQTTSGSTLEKLQKTGKVVIGVRESSAPMAYAIGANHRFTGYHVELCE 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 + + I +KI+Y+ + A+ +Q+ +D+ T L R+ ++F TY Sbjct: 74 KVLAQI-APSAKIEYMAITAQNTMPLVQNGTVDLGCGPTTNNLSRQK--QVSFAVTTYVS 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + ++S QL G ++ AGTT L Y +N+K + + E Sbjct: 131 QVRMAVRADSPVTSFKQLDGKTVAASAGTTAVQLLRKYSHDNNVKLPTQLGKDHFESFLM 190 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + R DA+ D + L + + P + I+ + + P+A + + D + V Sbjct: 191 LESGRADAFVLDDNLLAGVIANSKDPRGYKIVGEALGSEPIALLMRKDDPSFKKAVDDAL 250 Query: 246 YAMVTAEE 253 M+ + E Sbjct: 251 VRMMKSGE 258 >gi|308184914|ref|YP_003929047.1| glutamine ABC transporter periplasmic glutamine-binding protein [Helicobacter pylori SJM180] gi|308060834|gb|ADO02730.1| glutamine ABC transporter periplasmic glutamine-binding protein [Helicobacter pylori SJM180] Length = 277 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 13/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 8 KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 68 DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G + K I ++ +L + V GTT + F H + FE+ Sbjct: 126 KPYMKVALGVVS-KDGVIKNIEELENKELIVNKGTTADFY----FTKHYPNIKLLKFEQN 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A ++ A D + L A P + + + K +APAI +G+ + Sbjct: 181 TETFLALLNNKAIALAHDNTLLLAWIKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLE 238 Query: 240 IVSWTHYAMVTAEELG 255 + ++++++ L Sbjct: 239 WLDNEMDSLISSDFLK 254 >gi|268319108|ref|YP_003292764.1| amino acid ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] gi|262397483|emb|CAX66497.1| amino acid ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] Length = 273 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 96/250 (38%), Gaps = 14/250 (5%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M + FF + L +F S ++ ++KK + G+ F + G Sbjct: 1 MKRKLRFFSLFIVLFSVFLLSACQKNTRNVYQEVKKSNEITWGVKADTRLFGLMSIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GF+VD AL+ I +K ++ AK + L+++ ID + T R+ Sbjct: 61 IEGFEVDLANALTKEILGKNAKANFVQTTAKTKIPLLKNENIDAVLAAMTITPERKK--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F ++ GQ ++ I +V L+G + GTT + + + Sbjct: 119 IDFSDPYFYAGQSLLVKDDSSIKNVRDLNGKTALAVKGTTAVDNVKKFAPKAK----VLE 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + A +A + A T D L + N + ++ + P A+ +G T Sbjct: 175 YDDYGQAFTALKAGQGQAMTTDNGLLAGIATENKG---YKLVGGTYTNEPYGIAVNKGQT 231 Query: 236 EWYNIVSWTH 245 + N ++ Sbjct: 232 QMRNAINRAL 241 >gi|213970850|ref|ZP_03398973.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|301384514|ref|ZP_07232932.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302130493|ref|ZP_07256483.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924373|gb|EEB57945.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] Length = 308 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 83/241 (34%), Gaps = 7/241 (2%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDF----CRALSSAIFDD 74 + L IK+ G + G + F+ + A+G G+ D A+ + Sbjct: 23 AAELTGTLKKIKESGTITLGHRDASIPFSYIADASGIPMGYSHDIQLKIVEAIKKELDMP 82 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K++Y + ++ R +Q+ +D+ +T + R + F + G + K Sbjct: 83 DLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVDFSIGIFEVGTRLLSKKD 140 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 L G ++ AGTT+E L M + I + E + R A+ Sbjct: 141 SSYKDFDDLKGKNVVTTAGTTSERILKTMNADKQMGMNVISAKDHGESFQMLESGRAVAF 200 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L +P + + S + +GD + V A + ++ Sbjct: 201 MMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGDI 260 Query: 255 G 255 Sbjct: 261 N 261 >gi|172065224|ref|YP_001815936.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171997466|gb|ACB68383.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 313 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 12/245 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75 + + L ++ G + G + F+ + A G+ ++ C+AL S+I + Sbjct: 38 APAQLTGTLAKVRSSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVSSIEDAVNKS 97 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 I+++P+ + R A+ S +D+ +T L R +AF PI + G ++ + Sbjct: 98 LTIRWVPVTSDNRIDAVVSGNVDLECGSTTSNLER--QQRVAFSPIIFVAGTKVMVKRGS 155 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L+G + V AGTT E L D + V + A R DA+ Sbjct: 156 PIRSFRDLAGKKVAVTAGTTNEKALRDLDARFKLGIQLQVVPDHAQGFALVANGRADAFA 215 Query: 196 GDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D LY L + ++ ++ D +S P + D + +V T EEL Sbjct: 216 TDDVLLYGLIAENAGKGGQYDVVGDYLSYDPYGIMFRKDDPQLAQVVKSTF------EEL 269 Query: 255 GITQK 259 + + Sbjct: 270 AVDGE 274 >gi|296158165|ref|ZP_06840997.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295891501|gb|EFG71287.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 337 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 88/257 (34%), Gaps = 11/257 (4%) Query: 7 VSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + L + S +A L I G + G+ + F+ G G+ Sbjct: 45 LMALAAFGALSLACSAHADELTGTLKKIHDDGVVVLGVREASIPFSYFDGQGT-VGYSQT 103 Query: 63 FC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + + K+ + + + R L + QID+ +T T+ RE F Sbjct: 104 IALQIVDEIKKTLGMPQLKVHEITVTSSNRTPMLLNNQIDLECGSTTHTVERESVAA--F 161 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + I K GI+ L+G ++ AGT+ E L ++ Sbjct: 162 SNSFFQYAVRMIARKSSGITDFQDLAGKTVVTTAGTSDERLLRRLNTDKHLNMRITSARD 221 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E A + R A+ D +Y K T+ RP + V+ + A +GD + Sbjct: 222 HLEAFGAVKDDRAVAFVMDEPIVYGFKSTDSRPDDFVVTGTPLGYEVYACMFRKGDEPFR 281 Query: 239 NIVSWTHYAMVTAEELG 255 N+V+ T+ E Sbjct: 282 NLVNGVIARGQTSGEAE 298 >gi|86150617|ref|ZP_01068839.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596800|ref|ZP_01100037.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 84-25] gi|218562540|ref|YP_002344319.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|123336799|sp|Q0P9X8|PEB1A_CAMJE RecName: Full=Major cell-binding factor; AltName: Full=CBF1; AltName: Full=PEB1; Flags: Precursor gi|388565|gb|AAA02919.1| major cell-binding factor [Campylobacter jejuni subsp. jejuni 81-176] gi|85838878|gb|EAQ56145.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni CF93-6] gi|88191641|gb|EAQ95613.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 84-25] gi|112360246|emb|CAL35041.1| aspartate/glutamate-binding ABC transporter protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926154|gb|ADC28506.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Campylobacter jejuni subsp. jejuni IA3902] Length = 259 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 10/245 (4%) Query: 2 YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K + + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 4 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + +D + T R+ F Sbjct: 64 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 121 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + + K + F Sbjct: 122 SEPYYQDAIGLLVLKEKKYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R DA++ D S L ILPD + D + Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 236 Query: 239 NIVSW 243 V Sbjct: 237 KYVDD 241 >gi|37524239|ref|NP_927583.1| hypothetical protein plu0219 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36783662|emb|CAE12514.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 278 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 66/328 (20%), Positives = 109/328 (33%), Gaps = 66/328 (20%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M ++ L L L + + A L DIKK G ++ + F + G+ Sbjct: 1 MKSRVVITAL-LAGLTLVTGAAKADKLDDIKKTGAVRIAVFDSNPPFGFIDPQTKKLAGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A+++ + ++ P N R L SK++D+++ N T R + F Sbjct: 60 DVDIANAIANDLGVK---LELRPTNPANRLPLLASKKVDLIAANFTVTHERAK--QVDFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + S + I GT E+TL +++ I ++ Sbjct: 115 IPYFATGQKFIARKG-ILKSPEDIKNLRIGADKGTVQEITLREHYPTAK----VISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237 AA R A T D + L L E I P I++ A A +G Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLANVPEAQKAEFEISPFSITREYQAVAAAKGQERL 229 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 V+ T L ++K Sbjct: 230 VEAVNQT-------------------------------LLKLEKEGEAA----------- 247 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRG 325 E+++R G +++ PRG Sbjct: 248 ----------EIYNRWFGPETKSAQPRG 265 >gi|315144632|gb|EFT88648.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX2141] gi|315160937|gb|EFU04954.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0645] Length = 275 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 99/272 (36%), Gaps = 28/272 (10%) Query: 1 MYK--DFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGL 44 M K + + L++ ++ S + +KK G +K G+ + Sbjct: 1 MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTVTVEQLKKAGKIKVGVKEDI 60 Query: 45 VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F + + +G + D R ++ I ++++ + AK R L + ++D++ Sbjct: 61 PNFGYMNPDTNKNEGMEPDIARLIAKEITGSEENVEFVGVTAKTRGPLLDNGELDMVIAT 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + F Y D GF++ K+ SS+ L G +I V TT+ L Sbjct: 121 FTITDERKKT--YNFTTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 178 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + +K+ E+ A + R DA++ D S L IL D S Sbjct: 179 AQEEGIKFTYQELGSYPELKTALTSKRIDAFSVDKSILSGYVDGKT-----EILKDGFSP 233 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + +TE + ++ E Sbjct: 234 QEYGITTKKANTEL----NDYLNGLIEKWEKD 261 >gi|239833796|ref|ZP_04682124.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] gi|239821859|gb|EEQ93428.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] Length = 258 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 90/249 (36%), Gaps = 11/249 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I A+ L +K+ G L+ G++ F+ V GFD Sbjct: 1 MKTLLSSLVAAGIGALMMLAPAQANDLEKVKQSGELRIGMSGVFPPFSFVDGQNQVVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + P + L++ + D++ + T RE + F Sbjct: 61 VDIGTEIAKRLGVKPVVVT---TAFDGIIAGLRAGKFDVVVGSMSITPEREK--AVDFAG 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G+G + + I S+ +L G +I V G T++ + + ++ + Sbjct: 116 PYYRGGRGIFVTEASPIKSMDELKQGKTIAVTLGETSDKWARE-----QGGWTVRTYKGI 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ R+ R DA D + + + P++ + A+ +G+ E + Sbjct: 171 PELLLELRSGRVDAIASDDIPILIAIKESGEKVRQLDTPELQGTDNVGIALRKGNPELKD 230 Query: 240 IVSWTHYAM 248 ++ M Sbjct: 231 AINKALDDM 239 >gi|315124414|ref|YP_004066418.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315018136|gb|ADT66229.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 259 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 10/245 (4%) Query: 2 YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K + + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 4 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + +D + T R+ F Sbjct: 64 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 121 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + + K + F Sbjct: 122 SEPYYQDAIGLLVLKEKNYKSLADMEGANIGVAQAATTKKAIGEAAKKIGIDVKFNEFPD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R DA++ D S L ILPD + D + Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 236 Query: 239 NIVSW 243 V Sbjct: 237 KYVDD 241 >gi|116629190|ref|YP_814362.1| amino acid ABC transporter periplasmic protein [Lactobacillus gasseri ATCC 33323] gi|238853883|ref|ZP_04644246.1| glutamine-binding protein [Lactobacillus gasseri 202-4] gi|311111032|ref|ZP_07712429.1| glutamine-binding protein [Lactobacillus gasseri MV-22] gi|116094772|gb|ABJ59924.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus gasseri ATCC 33323] gi|238833469|gb|EEQ25743.1| glutamine-binding protein [Lactobacillus gasseri 202-4] gi|311066186|gb|EFQ46526.1| glutamine-binding protein [Lactobacillus gasseri MV-22] Length = 273 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 93/251 (37%), Gaps = 14/251 (5%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M + ++L + L ++ ++K+ + G+ F + G Sbjct: 1 MKRKLRIFSLFTVLLSVFLLSACRKNTRNVYQEVKRSNEITWGVKADTRLFGLMSIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GF+VD AL+ + +K ++ AK + L++ ID + T R+ Sbjct: 61 IEGFEVDLANALTKEMLGKDAKANFVQTTAKTKIPLLKNGNIDAVLAAMTITPERKK--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F ++ GQ ++ + I +V L+G + GTT + + + Sbjct: 119 IDFSEPYFYAGQSLLVKEDSTIKNVQDLNGKTALAVKGTTAVANVKKFAPKAK----VLE 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + A +A + A T D L + N + ++ + P A+ +G Sbjct: 175 FDDYGQAFTALKAGQGQAMTTDNGLLAGIATENKG---YKLVGGTYTNEPYGIAVNKGQK 231 Query: 236 EWYNIVSWTHY 246 + N ++ Sbjct: 232 QMKNAINRALN 242 >gi|182441006|dbj|BAG24131.1| probable binding protein component of ABC [Pseudomonas cichorii] Length = 268 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 102/278 (36%), Gaps = 17/278 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M K ++ + + L S +A L DIKK G L+ F V A +G Sbjct: 1 MKK---LTAITALSLAVLSGLAHADRLEDIKKSGVLRVAAFDSNPPFGFVGAKSKQIEGL 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +A++ + +Q P N R L + ++D++ N T R + F Sbjct: 58 DVDYAKAIADKLGVK---LQLQPTNPANRVPLLVANKVDLVLANFTITPERAE--QVNFS 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI+ K + + L+ + V GT E L + F I ++ Sbjct: 113 IPYFSSGQQFIVKKG-TLKNQDDLNKWRVGVDKGTVNEGVLREKFP----GAKVIAYDDT 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R A T D L L ++ + P IS + I +G+T Sbjct: 168 PFAFTALRNGNVQAITQDGPKLIGLLANVPDKDKYEVPPFTISNDLIGVGIPKGETALTE 227 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 V+ T V E G QK + T + R Sbjct: 228 FVNQTL---VELESKGQAQKIYDTWFGPDTPTLLARLF 262 >gi|170704112|ref|ZP_02894730.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170130978|gb|EDS99687.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 313 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 61/290 (21%), Positives = 114/290 (39%), Gaps = 22/290 (7%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75 + + L ++ G + G + F+ + A G+ ++ C+AL S+I + Sbjct: 38 APAQLTGTLAKVRSSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVSSIEDAVNKS 97 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 I+++P+ + R A+ S +D+ +T L R +AF PI + G ++ + Sbjct: 98 LTIRWVPVTSDNRIDAVASGNVDLECGSTTSNLER--QQRVAFSPIIFVAGTKVMVKRGS 155 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L+G + V AGTT E L D + V + A + R DA+ Sbjct: 156 PIRSFRDLAGKKVAVTAGTTNEKALRDLDARFKLGIQLQVAPDHAQGFALVASGRADAFA 215 Query: 196 GDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D LY L + ++ ++ D +S P + D + +V T EEL Sbjct: 216 TDDVLLYGLIAENAGKGGQYDVVGDYLSYDPYGIMFRKDDPQLAQVVKSTF------EEL 269 Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304 + + + +R+ S + L +++ II +G Sbjct: 270 AVDGE---------ISRQYKRWFLRPLPSGVSLNLPMSQQ-LKTIIEAIG 309 >gi|16803778|ref|NP_465263.1| hypothetical protein lmo1738 [Listeria monocytogenes EGD-e] gi|224503337|ref|ZP_03671644.1| hypothetical protein LmonFR_12625 [Listeria monocytogenes FSL R2-561] gi|284802182|ref|YP_003414047.1| hypothetical protein LM5578_1938 [Listeria monocytogenes 08-5578] gi|284995324|ref|YP_003417092.1| hypothetical protein LM5923_1889 [Listeria monocytogenes 08-5923] gi|16411192|emb|CAC99816.1| lmo1738 [Listeria monocytogenes EGD-e] gi|284057744|gb|ADB68685.1| hypothetical protein LM5578_1938 [Listeria monocytogenes 08-5578] gi|284060791|gb|ADB71730.1| hypothetical protein LM5923_1889 [Listeria monocytogenes 08-5923] Length = 271 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 89/250 (35%), Gaps = 11/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S++ S IKK + G++ V + + Sbjct: 1 MKKGLLITVMLMVMLALGACSSSESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + ++ P++ + L++ ID++ T R+ + Sbjct: 61 GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 F + Q + K I+ S + ++ Q G ++ +A + P Sbjct: 116 FSQPYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATDFAVGMRKSD 235 Query: 235 TEWYNIVSWT 244 E ++ Sbjct: 236 KELQKKINEA 245 >gi|258406149|ref|YP_003198891.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] gi|257798376|gb|ACV69313.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] Length = 275 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 102/251 (40%), Gaps = 11/251 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + LF + K ++ G+ T + A + +W GFD Sbjct: 1 MRFGKILFLAVIFALFSAQAVLAGPTYDQVMKDKVIRAGLMTDSIPGAFYNKDNEWVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + + ++ + K R +Q +ID+ N T RE + F Sbjct: 61 VDIAKEIAKRLDCELKRVP---VTNKTRIAFVQQGRIDMSVANM--THKRERDKSIDFSI 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHPIVFE 177 +FDGQ ++ K + ++ G I GTT+E+ L + + + I F+ Sbjct: 116 TYFFDGQKLLVKKGSFA-NWDEIVGQKIATMQGTTSEVNLKNKLEELGDTNADDNVISFQ 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + E A R ++ D + L RP E+ ++ D IS P + + D++W Sbjct: 175 KESECFQALEMGRVAGWSTDSTILLGYAA--KRPGEYELIGDFISDEPYGIGLPEDDSKW 232 Query: 238 YNIVSWTHYAM 248 + +++T M Sbjct: 233 RDTINFTIQDM 243 >gi|121613532|ref|YP_001000595.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Campylobacter jejuni subsp. jejuni 81-176] gi|157415178|ref|YP_001482434.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Campylobacter jejuni subsp. jejuni 81116] gi|167005526|ref|ZP_02271284.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 81-176] gi|146325049|sp|A1VZQ4|PEB1A_CAMJJ RecName: Full=Major cell-binding factor; AltName: Full=CBF1; AltName: Full=PEB1; Flags: Precursor gi|87248925|gb|EAQ71888.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 81-176] gi|157386142|gb|ABV52457.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 81116] gi|307747819|gb|ADN91089.1| Major cell-binding factor [Campylobacter jejuni subsp. jejuni M1] gi|315932598|gb|EFV11529.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 327] Length = 259 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 10/245 (4%) Query: 2 YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K + + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 4 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + +D + T R+ F Sbjct: 64 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 121 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + + K + F Sbjct: 122 SEPYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R DA++ D S L ILPD + D + Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 236 Query: 239 NIVSW 243 V Sbjct: 237 KYVDD 241 >gi|326315798|ref|YP_004233470.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372634|gb|ADX44903.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 267 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 77/251 (30%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFT-----SFSTNASILGDIKKR-GFLKCGINTGLVGFAEVKANG 54 M K ++++ L L S AS + G++ Sbjct: 1 MKKIAAIALVSLGALLAACGKNDSAQPAASTPATPPAAVTKIVIGLDDNFPPMGFRDDKN 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+D R + + + +++ P++ + L K++D L T R+ Sbjct: 61 QLVGFDIDMAREAAKRMGVE---VEFKPIDWSAKEAELSGKRVDALWNGLTITEERK--Q 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 +AF + Q ++ I + + L+G + Q G++ + Sbjct: 116 NIAFTAPYMENHQIVVVAANSPIKTKADLAGKIVGAQEGSSAVDAVKKDEAVFKSFKEFK 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F R +A D + +P ++ +L + + + D Sbjct: 176 TFGDNVTALMDLSTGRLEAVVVDE--VVGRYYVAKKPQDYAVLDEHFGTEEYGVGVRKDD 233 Query: 235 TEWYNIVSWTH 245 T + Sbjct: 234 TALQGRLDKAL 244 >gi|111019187|ref|YP_702159.1| amino acid ABC transporter ATP-binding protein [Rhodococcus jostii RHA1] gi|110818717|gb|ABG94001.1| probable ABC amino acid transporter, binding component [Rhodococcus jostii RHA1] Length = 326 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 10/222 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + I+ RG L G++TG + G +GFDVD R ++ +F DP +++Y L Sbjct: 81 PTVDAIRARGRLVVGLDTGSNLMSFRDPATGAVQGFDVDIAREIARDLFGDPDRLEYRIL 140 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R ALQ +DI+++ T + +AF + Q ++ K I S + L Sbjct: 141 TSANREKALQESMVDIVAKTMTITC--DRKERVAFSSEYFEAQQRVLVVKGSPIRSAADL 198 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G +CV GTT+ L + + + + DA + D + L Sbjct: 199 DGKRVCVVRGTTSLTRLQQVAPTA----DILTVPMWSDCLVVLQQRQVDAVSTDDTILAG 254 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L + I+ D + P I + + + V+ T Sbjct: 255 LASQDP---YLEIVGDSMGAEPYGVGITKANEDLVRFVNGTL 293 >gi|295394798|ref|ZP_06805013.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Brevibacterium mcbrellneri ATCC 49030] gi|294972394|gb|EFG48254.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Brevibacterium mcbrellneri ATCC 49030] Length = 295 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 94/282 (33%), Gaps = 35/282 (12%) Query: 1 MYK-DFFVSILCLIILFFTSFS-------------------------TNASILGDIKKRG 34 M K V+ L + IL T ++ K G Sbjct: 1 MKKVTTLVAGLAVGILALTGCGKEGAPGEQGSGGEAPEYKVAEGVDLADSPTWKKAKDAG 60 Query: 35 FLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 +K G+ G + A +GFD++ + +S+++ +I+++ + R LQ Sbjct: 61 KIKVGVKYDQPGLGNISAGADKPEGFDIEIAKMVSASLGFKADEIEFVETVSANREPFLQ 120 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 +D++ R+ + F Y GQ ++ I L+G +C G Sbjct: 121 QGNVDMIVATYTINDKRKEV--VDFAGPYYVAGQDLLVKADSDIDGPDSLAGKKVCSVDG 178 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T + + +K + ++ + ++ DA T D + L E Sbjct: 179 STPAQNIQEKYK----DAELVTYDAYSKCVTDLQSGNVDAVTTDDAILRGYAAQYKD--E 232 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 ++ ++ P + + D + V+ A + + Sbjct: 233 FKVVGKPFTEEPYGIGLPKDDKALRDAVNDALEASKDSGDWK 274 >gi|302523732|ref|ZP_07276074.1| amino acid ABC transporter ATP-binding protein [Streptomyces sp. AA4] gi|302432627|gb|EFL04443.1| amino acid ABC transporter ATP-binding protein [Streptomyces sp. AA4] Length = 321 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 89/235 (37%), Gaps = 10/235 (4%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSA 70 L L T+ L IK+RG L G++ F G +GFD+D ++ Sbjct: 64 LASLAPNGLDTSGPSLQKIKQRGKLIAGVDQTTYLFGFRNPKTGKLEGFDIDLVNEIARQ 123 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 IF +QY + + +R L+ Q+D++ R T R + F + Y GQ + Sbjct: 124 IFGSDGHVQYRAITSSQRETVLKEHQVDVVVRTYSITCARRKQVQ--FSSVYYVAGQKIL 181 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + K S++ L+G +C A +T+ +A + + + + Sbjct: 182 VPKSSNAQSLTDLAGKRVCAAAKSTSLAKIATDPAK----PVAVSVPNWSDCLVMLQQGQ 237 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 DA + D + L + + + D +++ I + + + V+ Sbjct: 238 VDAVSTDDTILAGMAAQDP---TVKVAGDPMTQENYGVGIPKDEEDLVRFVNAVL 289 >gi|150015935|ref|YP_001308189.1| extracellular solute-binding protein [Clostridium beijerinckii NCIMB 8052] gi|149902400|gb|ABR33233.1| extracellular solute-binding protein, family 3 [Clostridium beijerinckii NCIMB 8052] Length = 277 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 91/257 (35%), Gaps = 14/257 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIK------KRGFLKCGINTGLVGFAEVKANGD 55 K V+I+ + + + NA+ + K + L G++ V NG+ Sbjct: 8 KKLTVVAIIATLGVSLVACGGNANKSSESKAAKSALDKDELVIGLDDTFVPMGFKNENGE 67 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD A+ + +++ ++ + L + ID++ T R+ Sbjct: 68 IVGFDVDLANAVGKKLNKK---VKFQSIDWSMKETELNNGNIDLIWNGYSITDERKE--K 122 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL--ADYFKAHNMKYHP 173 + F + Q + I S + L+G + Q G+T + A+ + Sbjct: 123 VEFSKPYLSNTQVIVTLADSNIESKNDLAGKKVGAQNGSTAVDAVEAANGIEKTFDGGKL 182 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + FE A R DA D L + ++ IL D I +G Sbjct: 183 VTFEDNNAALMDLEAKRLDAIVVDE-ILARYYMKARGEEKYKILTDNFGSEKYGVGIKKG 241 Query: 234 DTEWYNIVSWTHYAMVT 250 DT++ + +++ Sbjct: 242 DTKFVEAFNKALDEVIS 258 >gi|47095664|ref|ZP_00233271.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes str. 1/2a F6854] gi|224499542|ref|ZP_03667891.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes Finland 1988] gi|254900757|ref|ZP_05260681.1| amino acid ABC transporter (binding protein) [Listeria monocytogenes J0161] gi|254913757|ref|ZP_05263769.1| amino acid ABC transporter [Listeria monocytogenes J2818] gi|254938144|ref|ZP_05269841.1| amino acid ABC transporter [Listeria monocytogenes F6900] gi|47015949|gb|EAL06875.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes str. 1/2a F6854] gi|258610758|gb|EEW23366.1| amino acid ABC transporter [Listeria monocytogenes F6900] gi|293591774|gb|EFG00109.1| amino acid ABC transporter [Listeria monocytogenes J2818] Length = 271 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 89/250 (35%), Gaps = 11/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S++ S IKK + G++ V + + Sbjct: 1 MKKGLLITVMLMVMLALGACSSSESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + ++ P++ + L++ ID++ T R+ + Sbjct: 61 GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 F + Q + K I+ S + ++ Q G ++ +A + P Sbjct: 116 FSQPYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATDFAVGMRKSD 235 Query: 235 TEWYNIVSWT 244 E ++ Sbjct: 236 KELQTKINEA 245 >gi|315927529|gb|EFV06862.1| Putative peptide ABC-transport system periplasmic peptide-binding protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 264 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 10/245 (4%) Query: 2 YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K + + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 9 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 68 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + +D + T R+ F Sbjct: 69 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 126 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + + K + F Sbjct: 127 SEPYYQDAIGLLVLKEKKYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 186 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R DA++ D S L ILPD + D + Sbjct: 187 YPSIKAALDAKRVDAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 241 Query: 239 NIVSW 243 V Sbjct: 242 KYVDD 246 >gi|257784253|ref|YP_003179470.1| extracellular solute-binding protein family 3 [Atopobium parvulum DSM 20469] gi|257472760|gb|ACV50879.1| extracellular solute-binding protein family 3 [Atopobium parvulum DSM 20469] Length = 298 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 12/228 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L DIKK G + G+ + F V ANG++ G+D+ F L+ + I Y+ + Sbjct: 52 TLDDIKKAGTVNIGVFSDKAPFGYVDANGNYAGYDIVFAERLAKDMGVK---INYIATDG 108 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + R LQS + DI+ N T + + F G + I+ VSQL G Sbjct: 109 QNRVPFLQSNKADIMLANFTVTD--DRKEKVDFSLPYMKIKLGVVSPASAPITDVSQLDG 166 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + V GTT E+ +F + K + F+ + A R DA++ D + + A Sbjct: 167 KKLIVSKGTTAEV----WFAKNAPKVELVKFDSYADAYNALLDGRGDAFSTDNTEVLAW- 221 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 P V + D+ +A A+ +G++ ++ + AEE Sbjct: 222 -VKSNPGFIVGIDDLGDSDTIAAAVHKGNSSLLEFINNEITGPL-AEE 267 >gi|327400781|ref|YP_004341620.1| ABC transporter periplasmic subunit family 3 [Archaeoglobus veneficus SNP6] gi|327316289|gb|AEA46905.1| ABC-type transporter, periplasmic subunit family 3 [Archaeoglobus veneficus SNP6] Length = 274 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 79/221 (35%), Gaps = 10/221 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K G L G++ F + +++GFDVD + + + +++++ + + Sbjct: 48 KPGVLTVGMDATYPPFEYINETTDEFEGFDVDLMKEIGKRLG---LEVEFVNVAWEGIIP 104 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASIC 149 L + + D + T R+ + F + Q ++ I+ L+G + Sbjct: 105 GLVAHKYDCICSAMTITEERKK--QIDFSDPYFEAWQVIVVRADCTDITKPEDLAGKVVG 162 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 VQ GTT +A+ + + ++ + + DA D A K + Sbjct: 163 VQIGTTG-QFVAEDLVKSGINFEIKTYDTTPDALLDLKNGNIDAVIIDN--GVAEKAIKN 219 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 P + + +S A+ + + E ++ + Sbjct: 220 NPDVYKTVGGKLSYEEYGIAVAKDNPELLKAINQALKEVKE 260 >gi|294651269|ref|ZP_06728595.1| glutamate-aspartate ABC superfamily ATP binding cassette transporter, binding protein [Acinetobacter haemolyticus ATCC 19194] gi|292822835|gb|EFF81712.1| glutamate-aspartate ABC superfamily ATP binding cassette transporter, binding protein [Acinetobacter haemolyticus ATCC 19194] Length = 314 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 94/276 (34%), Gaps = 26/276 (9%) Query: 3 KDFFVSILCLIILFFTSFS------------------TNASILGDIKKRGFLKCGINTGL 44 K S+LC L F + + + L IK G + G Sbjct: 4 KRTMTSLLCASALMFGLSACSDNKAPAAGDKATEGDVSTSGTLNKIKSSGTIVLGYRDSS 63 Query: 45 VGFAEVKAN-GDWKGFDVDF----CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 + F+ + N +G+ D A+ + KI+Y + ++ R + + +D+ Sbjct: 64 IPFSYIAGNPNQPEGYAHDLQLKVVEAVKQKLNMPDLKIRYNLVTSQNRIPLVSNGTVDL 123 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159 +T R + F + G + K GI + L G + AGTT+E Sbjct: 124 ECGSTTNNKER--QQQVDFSVGFFEVGSRLLTAKDSGIKDFADLKGKKLVTTAGTTSERY 181 Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 + + + + I + E + R A+ D L K P++ I+ Sbjct: 182 IRQHQQELGIG-EIISAKDHAESFLMLQNGRAVAFMMDDILLAGEKSKAKDPNKWNIVGT 240 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + +GDT + +V A + E+ Sbjct: 241 APIQEIYGCMLRKGDTGFKQVVDDAIKATYASGEIN 276 >gi|51892198|ref|YP_074889.1| glutamine ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] gi|51855887|dbj|BAD40045.1| glutamine ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 305 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 75/239 (31%), Gaps = 10/239 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDD 74 + AS L IK G L+ GI+ V +G GFD+D A++ + Sbjct: 58 SAGESAQPASSLERIKAEGVLRVGIDASYPPMEFVDEDGKTPIGFDIDLANAVAEKLGVK 117 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + ++ L D++ + T R+ + F G + Sbjct: 118 AD---FTIIDWAGIQAGLLGGHYDVIMSSMTITEERQKEM--DFV-QYLTMGIAYASRPG 171 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFERVEEIDAAYRAHRCDA 193 + S + L G + VQ TT + + D ++ F + R D Sbjct: 172 VEVRSDADLDGKIVVVQEETTAQYYVEDLMADKGIQPKELRSFPYATDAFRELANGRADV 231 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 D D V + P+ A+ +G+TE + + AE Sbjct: 232 VAIDAPV-AGYYAQLDPDQYRVTGFAEMDPDPIGIALRKGETELREALQKAVEE-LEAE 288 >gi|86150788|ref|ZP_01069004.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 260.94] gi|85841958|gb|EAQ59204.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 260.94] Length = 259 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 10/245 (4%) Query: 2 YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K + + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 4 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + +D + T R+ F Sbjct: 64 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 121 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + + K + F Sbjct: 122 SEPYYQDAIGLLVLKEKNYKSLADMEGANIGVAQAATTKKAIGEAAKKIGIDVKFNEFPD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R DA++ D S L ILPD + D + Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 236 Query: 239 NIVSW 243 V Sbjct: 237 KYVDD 241 >gi|70733740|ref|YP_257380.1| glutamine/glutamate ABC transporter periplasmic glutamine/glutamate-binding protein [Pseudomonas fluorescens Pf-5] gi|68348039|gb|AAY95645.1| glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein [Pseudomonas fluorescens Pf-5] Length = 294 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 8/219 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L IK R L G+ T F V G + GFD D R + + D +K++++ + Sbjct: 45 LDKIKARDKLIVGVFTDKPPFGFVDETGRYVGFDTDIGRQFAKDLLGDENKVEFVAVEPA 104 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R LQS ++D++ N T R+ + F ++ + + S+ L+ Sbjct: 105 SRIPFLQSDKVDLILANMTVTPERKE--AVEFTNPNLKVAVQALVPEGSAVKSLDDLASR 162 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + V GTT ++ L ++ + + FE+ E A R DAY D L++ Sbjct: 163 TTIVTTGTTADIWLTQ----NHPDWKLLKFEKNTESLQALANGRGDAYAQDNLILFSW-- 216 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + P V+ + ++P+APA+ +G+ E + V+ Sbjct: 217 SKQNPGYRVLPQTLGEQAPIAPAVKKGNIELRDWVNAEL 255 >gi|28871313|ref|NP_793932.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28854564|gb|AAO57627.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 308 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 83/241 (34%), Gaps = 7/241 (2%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDF----CRALSSAIFDD 74 + L IK+ G + G + F+ + A+G G+ D A+ + Sbjct: 23 AAELTGTLKKIKESGTITLGHRDASIPFSYIADASGIPMGYSHDIQLKIVEAIKKELDMP 82 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K++Y + ++ R +Q+ +D+ +T + R + F + G + K Sbjct: 83 DLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVDFSIGIFEVGTRLLSKKD 140 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 L G ++ AGTT+E + M + I + E + R A+ Sbjct: 141 SSYKDFDDLKGKNVVTTAGTTSERIIKTMNADKQMGMNVISAKDHGESFQMLESGRAVAF 200 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L +P + + S + +GD + V A + ++ Sbjct: 201 MMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGDI 260 Query: 255 G 255 Sbjct: 261 N 261 >gi|331015653|gb|EGH95709.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 308 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 83/241 (34%), Gaps = 7/241 (2%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDF----CRALSSAIFDD 74 + L IK+ G + G + F+ + A+G G+ D A+ + Sbjct: 23 AAELTGTLKKIKESGTITLGHRDASIPFSYIADASGIPMGYSHDIQLKIVEAIKKELDMP 82 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K++Y + ++ R +Q+ +D+ +T + R + F + G + K Sbjct: 83 DLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVDFSIGIFEVGTRLLSKKD 140 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 L G ++ AGTT+E + M + I + E + R A+ Sbjct: 141 SSYKDFDDLKGKNVVTTAGTTSERIIKTMNADKQMGMNVISAKDHGESFQMLESGRAVAF 200 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + L +P + + S + +GD + V A + ++ Sbjct: 201 MMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGDI 260 Query: 255 G 255 Sbjct: 261 N 261 >gi|293608418|ref|ZP_06690721.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828991|gb|EFF87353.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 288 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 101/226 (44%), Gaps = 8/226 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 + + S + IKK G ++ G+ + F + G +GFDV+ + ++ + D + Sbjct: 35 TANTTQTVSSIEQIKKNGVVRIGVFSDKPPFGYLDVQGKNQGFDVEIAKHVAKDLLGDEN 94 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K++++ A R L++ ++DI+ N T R+ + F G + K Sbjct: 95 KVEFVLTEAANRVEYLKANKVDIIFANFTVTPERKEV--VDFAKPYLKVALGVVSPKSHP 152 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I++V+QL ++ V GTT + +F + + +E+ E A + R A Sbjct: 153 ITNVAQLKDKTLLVNKGTTADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGAALAH 208 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 D + A + P+ V + ++ + +APA+ +GD E + ++ Sbjct: 209 DNLLVLAWA--KENPNYTVGITNLGEQDLIAPAVKKGDKELLDWLN 252 >gi|311106718|ref|YP_003979571.1| extracellular solute-binding protein, family 3 family protein 6 [Achromobacter xylosoxidans A8] gi|310761407|gb|ADP16856.1| bacterial extracellular solute-binding protein, family 3 family protein 6 [Achromobacter xylosoxidans A8] Length = 273 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 102/326 (31%), Gaps = 62/326 (19%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + + + A + DIK RG L CG F+ G+ Sbjct: 1 MKRHTLFAACLGLATLALGAVAQADQVDDIKARGELICGTLGTSQPFSFQDGTTRQLVGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C+ ++ + I Y L+ R L ++DIL+ N + + + F Sbjct: 61 DVDVCKLVADKLGVK---ISYKLLSVAARVPELNEGRVDILAANLG--YSPDRAQQIGFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y Q ++ K G+ +V L+G I G+++E + I + Sbjct: 116 HAYYVSPQKLLVRKDSGLETVEALNGRRIGATKGSSSEREIKRILDK----SQVIGYGDS 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A + + DA L L L + + ++ + P + + + + Sbjct: 172 SATYLALQQKKVDAQFASELVLVRLVLQSPPTAPVSVIAKSVFDEPWGLGVRKSEPRFLE 231 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V+ A+ AE G+ K Sbjct: 232 TVN---QALDEAEASGVAAK---------------------------------------- 248 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRG 325 +FD+ G ++ K+ RG Sbjct: 249 ---------LFDKWFGPETPYKLERG 265 >gi|29375695|ref|NP_814849.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecalis V583] gi|227518374|ref|ZP_03948423.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX0104] gi|227552903|ref|ZP_03982952.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis HH22] gi|229546202|ref|ZP_04434927.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX1322] gi|229550387|ref|ZP_04439112.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis ATCC 29200] gi|255976201|ref|ZP_05426787.1| extracellular solute-binding protein [Enterococcus faecalis T2] gi|256762127|ref|ZP_05502707.1| extracellular solute-binding protein [Enterococcus faecalis T3] gi|256852769|ref|ZP_05558139.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256958616|ref|ZP_05562787.1| extracellular solute-binding protein [Enterococcus faecalis DS5] gi|256962285|ref|ZP_05566456.1| extracellular solute-binding protein [Enterococcus faecalis Merz96] gi|256965480|ref|ZP_05569651.1| extracellular solute-binding protein [Enterococcus faecalis HIP11704] gi|257078030|ref|ZP_05572391.1| extracellular solute-binding protein [Enterococcus faecalis JH1] gi|257082918|ref|ZP_05577279.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol] gi|257085620|ref|ZP_05579981.1| extracellular solute-binding protein [Enterococcus faecalis Fly1] gi|257086474|ref|ZP_05580835.1| extracellular solute-binding protein [Enterococcus faecalis D6] gi|257415733|ref|ZP_05592727.1| extracellular solute-binding protein [Enterococcus faecalis AR01/DG] gi|257418948|ref|ZP_05595942.1| extracellular solute-binding protein [Enterococcus faecalis T11] gi|257422964|ref|ZP_05599954.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|293383314|ref|ZP_06629229.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Enterococcus faecalis R712] gi|293387529|ref|ZP_06632078.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Enterococcus faecalis S613] gi|294780990|ref|ZP_06746342.1| putative bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis PC1.1] gi|300859786|ref|ZP_07105874.1| putative Major cell-binding factor [Enterococcus faecalis TUSoD Ef11] gi|307268767|ref|ZP_07550135.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX4248] gi|307273810|ref|ZP_07555032.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0855] gi|307274579|ref|ZP_07555759.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX2134] gi|307278845|ref|ZP_07559908.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0860] gi|307288576|ref|ZP_07568560.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0109] gi|307291102|ref|ZP_07570987.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0411] gi|312899594|ref|ZP_07758920.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0470] gi|312905821|ref|ZP_07764841.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis DAPTO 512] gi|312909124|ref|ZP_07767983.1| putative bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis DAPTO 516] gi|312951371|ref|ZP_07770269.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0102] gi|29343156|gb|AAO80919.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecalis V583] gi|227074052|gb|EEI12015.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX0104] gi|227177975|gb|EEI58947.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis HH22] gi|229304509|gb|EEN70505.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis ATCC 29200] gi|229308726|gb|EEN74713.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX1322] gi|255969073|gb|EET99695.1| extracellular solute-binding protein [Enterococcus faecalis T2] gi|256683378|gb|EEU23073.1| extracellular solute-binding protein [Enterococcus faecalis T3] gi|256711228|gb|EEU26266.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256949112|gb|EEU65744.1| extracellular solute-binding protein [Enterococcus faecalis DS5] gi|256952781|gb|EEU69413.1| extracellular solute-binding protein [Enterococcus faecalis Merz96] gi|256955976|gb|EEU72608.1| extracellular solute-binding protein [Enterococcus faecalis HIP11704] gi|256986060|gb|EEU73362.1| extracellular solute-binding protein [Enterococcus faecalis JH1] gi|256990948|gb|EEU78250.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol] gi|256993650|gb|EEU80952.1| extracellular solute-binding protein [Enterococcus faecalis Fly1] gi|256994504|gb|EEU81806.1| extracellular solute-binding protein [Enterococcus faecalis D6] gi|257157561|gb|EEU87521.1| extracellular solute-binding protein [Enterococcus faecalis ARO1/DG] gi|257160776|gb|EEU90736.1| extracellular solute-binding protein [Enterococcus faecalis T11] gi|257164788|gb|EEU94748.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|291079337|gb|EFE16701.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Enterococcus faecalis R712] gi|291083039|gb|EFE20002.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Enterococcus faecalis S613] gi|294451936|gb|EFG20386.1| putative bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis PC1.1] gi|300850604|gb|EFK78353.1| putative Major cell-binding factor [Enterococcus faecalis TUSoD Ef11] gi|306497756|gb|EFM67288.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0411] gi|306500483|gb|EFM69816.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0109] gi|306504516|gb|EFM73723.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0860] gi|306508731|gb|EFM77821.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX2134] gi|306509495|gb|EFM78543.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0855] gi|306514895|gb|EFM83442.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX4248] gi|310628160|gb|EFQ11443.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis DAPTO 512] gi|310630631|gb|EFQ13914.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0102] gi|311290548|gb|EFQ69104.1| putative bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis DAPTO 516] gi|311293273|gb|EFQ71829.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0470] gi|315028076|gb|EFT40008.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX2137] gi|315031597|gb|EFT43529.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0017] gi|315034961|gb|EFT46893.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0027] gi|315148456|gb|EFT92472.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX4244] gi|315150401|gb|EFT94417.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0012] gi|315153642|gb|EFT97658.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0031] gi|315156540|gb|EFU00557.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0043] gi|315158366|gb|EFU02383.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0312] gi|315165530|gb|EFU09547.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX1302] gi|315168387|gb|EFU12404.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX1341] gi|315170970|gb|EFU14987.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX1342] gi|315174638|gb|EFU18655.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX1346] gi|315573711|gb|EFU85902.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0309B] gi|315582674|gb|EFU94865.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0309A] gi|323480358|gb|ADX79797.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecalis 62] gi|327534750|gb|AEA93584.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis OG1RF] gi|329576390|gb|EGG57903.1| major cell-binding factor [Enterococcus faecalis TX1467] Length = 275 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 99/272 (36%), Gaps = 28/272 (10%) Query: 1 MYK--DFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGL 44 M K + + L++ ++ S + +KK G +K G+ + Sbjct: 1 MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTVTVEQLKKAGKIKVGVKEDI 60 Query: 45 VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F + + +G + D R ++ I ++++ + AK R L + ++D++ Sbjct: 61 PNFGYMNPDTNKNEGMEPDIARLIAKEITGSEENVEFVGVTAKTRGPLLDNGELDMVIAT 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + F Y D GF++ K+ SS+ L G +I V TT+ L Sbjct: 121 FTITDERKKT--YNFTTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 178 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + +K+ E+ A + R DA++ D S L IL D S Sbjct: 179 AQEEGIKFTYQELGSYPELKTALTSKRIDAFSVDKSILSGYVDGKT-----EILKDGFSP 233 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + +TE + ++ E Sbjct: 234 QEYGITTKKANTEL----NDYLNGLIEKWEKD 261 >gi|257089531|ref|ZP_05583892.1| ABC amino acid transporter [Enterococcus faecalis CH188] gi|256998343|gb|EEU84863.1| ABC amino acid transporter [Enterococcus faecalis CH188] Length = 275 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 99/272 (36%), Gaps = 28/272 (10%) Query: 1 MYK--DFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGL 44 M K + + L++ ++ S + +KK G +K G+ + Sbjct: 1 MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTVTVEQLKKAGKIKVGVKEDI 60 Query: 45 VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F + + +G + D R ++ I ++++ + AK R L + ++D++ Sbjct: 61 PNFGYMNPDTNKNEGMEPDIARLIAKEITGSEENVKFVGVTAKTRGPLLDNGELDMVIAT 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + F Y D GF++ K+ SS+ L G +I V TT+ L Sbjct: 121 FTITDERKKT--YNFTTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 178 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + +K+ E+ A + R DA++ D S L IL D S Sbjct: 179 AQEEGIKFTYQELGSYPELKTALTSKRIDAFSVDKSILSGYVDGKT-----EILKDGFSP 233 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + +TE + ++ E Sbjct: 234 QEYGITTKKANTEL----NDYLNGLIEKWEKD 261 >gi|194292188|ref|YP_002008095.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein [Cupriavidus taiwanensis LMG 19424] gi|193226092|emb|CAQ72039.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein [Cupriavidus taiwanensis LMG 19424] Length = 281 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 91/244 (37%), Gaps = 8/244 (3%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA--- 70 +L + +L I+ G + G + F+ G G+ VD C + A Sbjct: 1 MLAPAQARAQSPVLDKIRDAGTIVLGYRESALPFSFADDKGQPAGYAVDLCLRAAEAARQ 60 Query: 71 -IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + K++++PL + R A+ + +D+ +L R+ + F Y Sbjct: 61 KLGLKDLKVRWMPLTPQNRIPAVVNGLVDLDCAPNTNSLERQKQVA--FSVSHYVSTVRM 118 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ GI S L G ++ AG+T + + + + + + E + Sbjct: 119 LVRADSGIRSFGDLRGKTVVTSAGSTGDRHVRRFKGQYGYHD--VYAKDHGESFLLLESG 176 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R A+ D L L+ PS++VI+ +S A + + D EW +V T Sbjct: 177 RAQAFVMDDVLLAGLRARAKDPSQYVIVGPALSVEQNALMLSKADPEWKRLVDQTLATTF 236 Query: 250 TAEE 253 E Sbjct: 237 AGPE 240 >gi|325685426|gb|EGD27527.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 276 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 96/261 (36%), Gaps = 16/261 (6%) Query: 1 MY--KDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K + L L T+ + IKKRG L G++ V + Sbjct: 1 MKWFKRILLLGLVLSCFLTTACSNLTKEANQKDTWAKIKKRGSLVIGLDDTFVPMDFRQK 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 +G G+DVD +A+ + + ++ + L++ ID+L T R+ Sbjct: 61 DGQLVGYDVDLAKAVCKKLGLKAD---FQTIDWSMKETELRNGTIDVLWNGYSVTSQRKK 117 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 +AF + Q ++ K GI S +Q+ G +I Q+G+T ++ L D + Sbjct: 118 --KVAFSRSYLRNRQILVVKKSSGIKSFAQMKGQAIGAQSGSTAQIWL-DGSQKVIKPKS 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAII 231 ++++ + A R D + + ++ + L A + Sbjct: 175 KVLYDTIPSAFLDLNAGRIKGILLDETYAEYYIKHEADSKSYQVILNKEVPEDLFAVGMR 234 Query: 232 QGDTEWYNIVSWTHYAMVTAE 252 +GD ++ A + A+ Sbjct: 235 KGDKNLKKKINQAL-AELQAD 254 >gi|164688274|ref|ZP_02212302.1| hypothetical protein CLOBAR_01919 [Clostridium bartlettii DSM 16795] gi|164602687|gb|EDQ96152.1| hypothetical protein CLOBAR_01919 [Clostridium bartlettii DSM 16795] Length = 284 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 88/259 (33%), Gaps = 18/259 (6%) Query: 1 MYKDFFVSILCLIILFFTSFS----------TNASILGDIKKRGFLKCGINTGLVGFAEV 50 M K ++++ ++ L N L + +G L G++ Sbjct: 8 MKKLSVIALVLMLGLSTFLGGCSSSSSSSSSANDDSLKYVMDKGELIVGLDDAFPPMGFR 67 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + + GFD+D + ++ + K+++ P+N + + L SK ID + T R Sbjct: 68 DDDNNIVGFDIDLAKEVAKRM---DIKVKFQPVNWQAKEQELSSKNIDCIWNGFGITPER 124 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 E L + Q F++ GI + L G I Q G+T T+ + + Sbjct: 125 EKV--LTISEPYMANPQIFVVLADSGIKTQDDLKGKVIAAQNGSTAYATIDKDTELKDSF 182 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPA 229 + E + DA D + A P ++ I+ D + Sbjct: 183 KEFVGVEDNVKALMDLGVGGSDAVAMDT--VVARYYMAKDPGKYSIIKDTTILDEKMGVG 240 Query: 230 IIQGDTEWYNIVSWTHYAM 248 +GD V T M Sbjct: 241 FRKGDNALCKKVEDTLKEM 259 >gi|312958337|ref|ZP_07772858.1| extracellular solute-binding protein [Pseudomonas fluorescens WH6] gi|311287401|gb|EFQ65961.1| extracellular solute-binding protein [Pseudomonas fluorescens WH6] Length = 282 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 8/225 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S + IK R L G+ T F V G + GFD D R + + D +K+++ Sbjct: 27 PAAVSYIDKIKARDKLIVGVFTDKPPFGFVNEAGRYVGFDTDIGRQFAKDLLGDENKVEF 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + R LQS ++D++ N T R+ + F ++ + S+ Sbjct: 87 VAVEPASRIPFLQSDKVDLILANMTVTPERKE--AVDFTNPNLKVAVQALVPNNSAVKSL 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+ + V GTT ++ L ++ + + FE+ E A A R DAY D Sbjct: 145 NDLATRTTIVTTGTTADIWLT----KNHPDWKLLKFEKNSESLQALSAGRGDAYAQDNLV 200 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L++ P V+ + ++P+APA+ +G+ E + V+ Sbjct: 201 LFSWAKQ--NPGYRVLEEKLGDEAPIAPAVKKGNIELRDWVNAEL 243 >gi|313618405|gb|EFR90428.1| amino acid ABC transporter, amino acid-binding protein [Listeria innocua FSL S4-378] Length = 271 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 88/250 (35%), Gaps = 11/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S+ S IKK + G++ V + + Sbjct: 1 MKKGLLITVMAIVMLALGACSSGESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ ++ P++ + L++ ID++ T R+ + Sbjct: 61 GFDIDLAKAVFEEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 F + Q + K I+ S + ++ Q G ++ +A + P Sbjct: 116 FSKPYMKNEQVLVTLKSSNINKFSDMKDKTLGAQNGASSIDDMAKKPEVLTDIIKNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYTIITGGFDPTDFAVGMRKSD 235 Query: 235 TEWYNIVSWT 244 E + ++ Sbjct: 236 KELQSKINEV 245 >gi|258406608|ref|YP_003199350.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] gi|257798835|gb|ACV69772.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] Length = 273 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 95/256 (37%), Gaps = 21/256 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-------SILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K + +++ + + + A S L I K G L+ G + G + F Sbjct: 1 MAKQWLAALVVVFVCLGGLSAQAADIELAQKSTLERILKSGELRVGFDPGYMPFEMTDTK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G + GFD+ + ++ ++ + + AL +K+ DI+ T R + Sbjct: 61 GRYVGFDIALAKEMAKSMGVKFVPVN---TDFDGIIPALLTKKFDIIISGITVTQER--N 115 Query: 114 LGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNM 169 L + F GQ ++ K ++ + S L+ V + TT E+ Y + Sbjct: 116 LQINFSDPYIVVGQTILLRKGLEEEVESYRDLNDGQYTVASRLGTTGEMAAKRYMPKADY 175 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 K +E+ + + DA+ D+ + L + + PLA Sbjct: 176 K----SYEKEADGALEVLNGQVDAFVYDLPFNAIFNAQQGKGKV-AFLDEPFTYEPLAFG 230 Query: 230 IIQGDTEWYNIVSWTH 245 I +GD ++ N ++ Sbjct: 231 IRKGDPDFLNWLNNFL 246 >gi|322833092|ref|YP_004213119.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] gi|321168293|gb|ADW73992.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] Length = 280 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 103/246 (41%), Gaps = 11/246 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + L L I ++F+ +A L DIKK G +K F + A D G+ Sbjct: 11 MTTSKIAAGLVLAISTLSTFTAHADQLADIKKAGVVKVATFDSNPPFGSLDAKTHDIVGY 70 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVDF +AL+ + +Q +P N R LQS + D++ + T R + F Sbjct: 71 DVDFAKALAKTLGVK---LQLVPTNPANRIPLLQSGKADLIVADITITPERAKV--IDFS 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F++ + + A I GTT E L + F + + ++ + Sbjct: 126 VPYFVTGQQFLVPAGSP-DKLDAYATARIGAVKGTTGEQELHNRFP----QSRVLSYDDI 180 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +A R A T D + L L +++ +LP+++SK + + +G+T Sbjct: 181 PLALSALRNGNVQAITQDSTILAGLLDGAPDKAKYKVLPELLSKEEIGVGVKKGETSLLK 240 Query: 240 IVSWTH 245 +V+ Sbjct: 241 VVNDEL 246 >gi|315303605|ref|ZP_07874149.1| amino acid ABC transporter, amino acid-binding protein [Listeria ivanovii FSL F6-596] gi|313628025|gb|EFR96614.1| amino acid ABC transporter, amino acid-binding protein [Listeria ivanovii FSL F6-596] Length = 271 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 88/252 (34%), Gaps = 11/252 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +I + ++ S IKK + G++ V + Sbjct: 1 MKKGLLIAVIAIISFTLVACGSSESKEDQWNRIKKDKEVVIGLDDSFVPMGFRDKEDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + K+++ P++ + L++ ID++ T R+ +A Sbjct: 61 GFDIDLAKAVFAEYG---IKVKFTPIDWTMKESELKNGSIDLIWNGYTVTDARKK--KVA 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 F + Q + K I+ S + ++ Q G ++ +A + P Sbjct: 116 FSNPYMKNEQVLVTLKSSNINKFSDMKDKTLGAQNGASSIDDMAKKPEVLTDIITNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDVAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIVTGGFDATDFAVGMRKSD 235 Query: 235 TEWYNIVSWTHY 246 + V+ Sbjct: 236 KKLQTKVNDAFQ 247 >gi|293553345|ref|ZP_06673981.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E1039] gi|291602569|gb|EFF32785.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E1039] Length = 271 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 87/265 (32%), Gaps = 11/265 (4%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K+ F+ L +L F S T+A I + + G++ V +G Sbjct: 1 MKKNSFLFALIAGLLLFAGCSNKKTSADNWATINEEKKIVIGLDDTFVPMGFRDKDGKLT 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + + P++ + L + ID++ T RE + Sbjct: 61 GFDIDLAKAVFEQYG---ITVDFQPIDWSMKEFELNNGTIDLIWNGYSKTPAREK--KVQ 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 F + Q I K+ GI++ Q++ + Q G++ + K + Sbjct: 116 FTKPYMENDQVLITPKESGITNFGQMNNKRLGAQNGSSGYDVFTKQPEVLKEIVKNQDAV 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ E ++ R D D + + I A + D Sbjct: 176 LYDSFNEALIDLKSRRVDGLLMDKVYADYYLKQRNELEDFNITKGSYESEDFAVGARKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259 + ++ + E Sbjct: 236 STLVKKINEALDQLEKTGEFQKISD 260 >gi|57237749|ref|YP_178997.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Campylobacter jejuni RM1221] gi|57166553|gb|AAW35332.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni RM1221] gi|315058360|gb|ADT72689.1| Major cell-binding factor precursor PebA [Campylobacter jejuni subsp. jejuni S3] Length = 259 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 59/245 (24%), Positives = 97/245 (39%), Gaps = 10/245 (4%) Query: 2 YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K + + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 4 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPYYALLDQATGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F++D + L+ +I D KI+ + +NAK R L + +D + T R+ F Sbjct: 64 FEIDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 121 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + + K + F Sbjct: 122 SEPYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R DA++ D S L ILPD + D + Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 236 Query: 239 NIVSW 243 V Sbjct: 237 KYVDD 241 >gi|78356430|ref|YP_387879.1| extracellular solute-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218835|gb|ABB38184.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 271 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 92/249 (36%), Gaps = 15/249 (6%) Query: 1 MY--KDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + ++ ++ + + S+L DI KRG L+ G + G F +G+ Sbjct: 1 MKFVKALVLLLVTVMAVPAFAGDIDLAKKSVLNDILKRGELRVGFDAGYPPFEMTDKSGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D + L+ ++ + + +L S + D++ T R + +G Sbjct: 61 FVGFDIDLGKELAKSMGVKFVPVN---TDFDGMIPSLLSGKFDVIISGMTLTQERNMKIG 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHP 173 + + K + S L+ V + TT E Y Sbjct: 118 FSEPYLVMGQTVLVAAKHKGTVKSYKDLNDPKFIVVSRMGTTGEEATKKYLPKA----TY 173 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 F++ + R DA+ D+ + + + +L + + P+A QG Sbjct: 174 KSFDKEVDCAMEVVNGRADAFVYDLPVNEVFQAQQGKDKTY-LLNEPFTFEPMAVGYKQG 232 Query: 234 DTEWYNIVS 242 D ++ N ++ Sbjct: 233 DPDFANFIN 241 >gi|69248237|ref|ZP_00604687.1| extracellular solute-binding protein, family 3 [Enterococcus faecium DO] gi|257880071|ref|ZP_05659724.1| extracellular solute-binding protein [Enterococcus faecium 1,230,933] gi|257882306|ref|ZP_05661959.1| extracellular solute-binding protein [Enterococcus faecium 1,231,502] gi|257891162|ref|ZP_05670815.1| extracellular solute-binding protein [Enterococcus faecium 1,231,410] gi|257893976|ref|ZP_05673629.1| extracellular solute-binding protein [Enterococcus faecium 1,231,408] gi|258614595|ref|ZP_05712365.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium DO] gi|260560316|ref|ZP_05832492.1| extracellular solute-binding protein family 3 [Enterococcus faecium C68] gi|261208253|ref|ZP_05922926.1| extracellular solute-binding protein family 3 [Enterococcus faecium TC 6] gi|289565945|ref|ZP_06446384.1| extracellular solute-binding protein, family 3 [Enterococcus faecium D344SRF] gi|293563076|ref|ZP_06677542.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E1162] gi|294616568|ref|ZP_06696345.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E1636] gi|294618838|ref|ZP_06698359.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E1679] gi|294623620|ref|ZP_06702458.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium U0317] gi|314940256|ref|ZP_07847429.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133a04] gi|314941686|ref|ZP_07848565.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133C] gi|314947670|ref|ZP_07851079.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0082] gi|314950657|ref|ZP_07853737.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133A] gi|314992476|ref|ZP_07857897.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133B] gi|314996870|ref|ZP_07861875.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133a01] gi|68194488|gb|EAN08986.1| extracellular solute-binding protein, family 3 [Enterococcus faecium DO] gi|257814299|gb|EEV43057.1| extracellular solute-binding protein [Enterococcus faecium 1,230,933] gi|257817964|gb|EEV45292.1| extracellular solute-binding protein [Enterococcus faecium 1,231,502] gi|257827522|gb|EEV54148.1| extracellular solute-binding protein [Enterococcus faecium 1,231,410] gi|257830355|gb|EEV56962.1| extracellular solute-binding protein [Enterococcus faecium 1,231,408] gi|260073661|gb|EEW61987.1| extracellular solute-binding protein family 3 [Enterococcus faecium C68] gi|260077510|gb|EEW65228.1| extracellular solute-binding protein family 3 [Enterococcus faecium TC 6] gi|289162229|gb|EFD10090.1| extracellular solute-binding protein, family 3 [Enterococcus faecium D344SRF] gi|291590578|gb|EFF22310.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E1636] gi|291594913|gb|EFF26269.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E1679] gi|291596946|gb|EFF28159.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium U0317] gi|291604990|gb|EFF34458.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E1162] gi|313589013|gb|EFR67858.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133a01] gi|313592936|gb|EFR71781.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133B] gi|313597204|gb|EFR76049.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133A] gi|313599458|gb|EFR78301.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133C] gi|313640576|gb|EFS05156.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133a04] gi|313645911|gb|EFS10491.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0082] Length = 271 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 86/265 (32%), Gaps = 11/265 (4%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F+ L +L F S T+A I + + G++ V +G Sbjct: 1 MKKTSFLFALIAGLLLFAGCSNKKTSADNWATINEEKKIVIGLDDTFVPMGFRDKDGKLT 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + + P++ + L + ID++ T RE + Sbjct: 61 GFDIDLAKAVFEQYG---ITVDFQPIDWSMKEFELNNGTIDLIWNGYSKTPAREK--KVQ 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 F + Q I K+ GI++ Q++ + Q G++ + K + Sbjct: 116 FTKPYMENDQVLITPKESGITNFGQMNNKRLGAQNGSSGYDVFTKQPEVLKEIVKNQDAV 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ E ++ R D D + + I A + D Sbjct: 176 LYDSFNEALIDLKSRRVDGLLMDKVYADYYLKQRNELEDFNITKGSYESEDFAVGARKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259 + ++ + E Sbjct: 236 STLVKKINEALDQLEKTGEFQKISD 260 >gi|282852735|ref|ZP_06262077.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus gasseri 224-1] gi|282556477|gb|EFB62097.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus gasseri 224-1] Length = 243 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 83/240 (34%), Gaps = 6/240 (2%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 AS IK+RG L G++ V + NG GFDVD A+ I P Sbjct: 1 MAGCQRQASSWQKIKERGTLVIGVDDSFVPMDFRQKNGKLVGFDVDLATAVCKEIGLKPD 60 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 + ++ + L++ ID++ T R +AF + Q + KK+ Sbjct: 61 ---FQTIDWSMKETELRNGTIDVIWNGYTKTKARAK--KVAFSRPYLENDQILVTRKKEQ 115 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-PIVFERVEEIDAAYRAHRCDAYT 195 I++ Q+ G + VQ G++ L +Y + ++++ +A R D Sbjct: 116 INNYCQMKGRILGVQTGSSGADDLDNYPNVLKKRVKSTVLYDTYNNAFIDLKAGRIDGLL 175 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + E + I + D + ++ + EL Sbjct: 176 IDGVYANYYLAHSKYQKEFKKEELPYPSEKFSVGINKKDQILKDKINQALDHLEKTGELE 235 >gi|241765003|ref|ZP_04762999.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241365400|gb|EER60193.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 298 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 96/253 (37%), Gaps = 8/253 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + + L IK G + G+ G A NG + GF Sbjct: 1 MKKHIFAIAVAALAAGSAFAQA-GDTLAKIKSSGSVTLGVRESS-GLAYTLGNGKYVGFH 58 Query: 61 VDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + + ++Y P+ ++ R + + +D+ +T R+ + Sbjct: 59 TEMGERILDDIQKQLGLAKLDVKYQPVTSQNRVPLVTNGTVDLECGSTTNNAARQKDVA- 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F TY + + GI S+ L+G ++ GTT+ TL + +A + + ++ Sbjct: 118 -FAVTTYVEEVRIAVKASSGIHSIKDLNGKTVATTTGTTSVQTLRKHERAGGIDFKEVLG 176 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R DA+ D S L P+++ I+ +++S P+A + + D Sbjct: 177 KDHADSFLLLETGRADAFVMDGSILAGNISKAKNPADYKIVGEVLSVEPIACMMRKDDPA 236 Query: 237 WYNIVSWTHYAMV 249 + V + + Sbjct: 237 FKKAVDDSIKRQI 249 >gi|254832441|ref|ZP_05237096.1| amino acid ABC transporter (binding protein) [Listeria monocytogenes 10403S] gi|255017462|ref|ZP_05289588.1| amino acid ABC transporter (binding protein) [Listeria monocytogenes FSL F2-515] Length = 271 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 89/250 (35%), Gaps = 11/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S++ S IKK + G++ V + + Sbjct: 1 MKKGLLITVMLMVMLALGACSSSESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + ++ P++ + L++ ID++ T R+ + Sbjct: 61 GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 F + Q + K I+ S + ++ Q G ++ +A + P Sbjct: 116 FSQPYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKGDYNIITGGFDATDFAVGMRKSD 235 Query: 235 TEWYNIVSWT 244 E ++ Sbjct: 236 KELQTKINEA 245 >gi|329118220|ref|ZP_08246930.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Neisseria bacilliformis ATCC BAA-1200] gi|327465641|gb|EGF11916.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Neisseria bacilliformis ATCC BAA-1200] Length = 321 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 98/219 (44%), Gaps = 8/219 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK++G ++ G+ F V + G +GFDV+ + ++ + P K++++ A R Sbjct: 81 IKEKGVIRIGVFGDKPPFGYVDSQGKNQGFDVEIAKEMAKDLLGSPDKVEFVLTEAANRV 140 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 +S ++D++ N T R + F G + KK ++ ++QL ++ Sbjct: 141 EYARSGKVDLVLANFTQTPERAE--AVDFAAPYMKVALGVVSPDKKPVTDIAQLKDQTLL 198 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V GTT + +F ++ + + F++ E A + R A D + L+A + Sbjct: 199 VNKGTTADA----FFSKNHPEVKLLKFDQNTETFDALKDGRGVALAHDNALLWAWA--KE 252 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 P V + +I +APA+ +GD + V+ AM Sbjct: 253 NPGYEVAIGNIGPAEVIAPAVKKGDKALLDWVNAEIAAM 291 >gi|227509837|ref|ZP_03939886.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190761|gb|EEI70828.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 277 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 102/266 (38%), Gaps = 20/266 (7%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVK- 51 M K V L ++++ + S+ + +L D K+ + G+ F + Sbjct: 1 MRKILSKVGLVVALLIMVVSLGACSSTSGSKRDVLKDDKQSNTITWGVKADTKLFGLMDV 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + KGF+VD +A++ I K +++ + ++ R L + ID + T R Sbjct: 61 KDNQIKGFEVDLAKAMTKEILGKKGKARFIQVTSQTRMPLLANGNIDAIMATMTITPQRA 120 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNM 169 + F + GQ ++ I +V L+ GA + G+ + + + Sbjct: 121 E--QVDFSRSYFDAGQAILVKDGSPIKNVRDLNRKGAVVLGVVGSNSVQNIKKFAPKA-- 176 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + A ++ + DA T D LY ++ + P + ++ +K P A Sbjct: 177 --RVLQLSDYSQALTALKSGQGDALTTDNGILYG--MSIENPG-YSVVGGTFTKEPYGIA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255 +G ++N ++ + + E Sbjct: 232 TAKGQRPFHNAINHALTKVENSGEYN 257 >gi|327470645|gb|EGF16101.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK330] Length = 270 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 99/259 (38%), Gaps = 14/259 (5%) Query: 17 FTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIF 72 ++S + I+KRG L G+ + F + + + G ++D + ++ + Sbjct: 22 AAPAQADSSTSQQVKAIQKRGVLNVGVKQDVPNFGYLNPDSNTYSGLEIDIAKKIAKELG 81 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 I YLP+ A+ R L + Q+D++ T R+ F Y D GF+++ Sbjct: 82 VK---INYLPVTAQTRGPLLDNGQVDMVIATFTITDERKEI--YNFTTPYYTDASGFLVN 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K I+ V L+ +I V G+ T+ L + + + + + E+ + RAHR D Sbjct: 137 KSSKITDVKDLNNKTIGVVQGSITQTLLEEIAQEKKLNFKYVELGSYPELAVSLRAHRID 196 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A + D S L + IL K+ + +T+ + V Sbjct: 197 AISVDKSILTGYVSSKSN-----ILDYSFKKADYGVVTKKSNTQLNDYVDGLISKWKENG 251 Query: 253 ELGITQKNINQVSKDTTNP 271 L + +T+ Sbjct: 252 SLQKLYDKYDLKPSASTDD 270 >gi|134293771|ref|YP_001117507.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134136928|gb|ABO58042.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia vietnamiensis G4] Length = 298 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 83/237 (35%), Gaps = 9/237 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIFDDPSKIQY 80 L IK G + GI V F+ + G+ D AL + + ++ Sbjct: 27 GTLKKIKDTGVVSLGIRESSVPFSYSDNQQNNIGYSRDIAARIIDALKAELKAPNLTVKE 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ ID +T TL R+ F + G F K G+ Sbjct: 87 IPITSQNRIPLLQNGTIDFECGSTTNTLERQKQAA--FSNSIFLYGIRFSTRKDSGVKDF 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+G ++ AGT+ E L + M I + E R A+ D Sbjct: 145 ADLAGKTVATTAGTSDERLLRKLNEEKAMNMTIISAKDHAEAFMNVTTGRAVAFVMDEPL 204 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT---HYAMVTAEEL 254 LY + P + + + A + + D + +V AE+L Sbjct: 205 LYGEIAKDRNPGAYTVAGTPLVHENYACMLRKDDPAFKQLVDRVIAQLQTSGAAEQL 261 >gi|331700617|ref|YP_004397576.1| ABC transporter periplasmic subunit [Lactobacillus buchneri NRRL B-30929] gi|329127960|gb|AEB72513.1| ABC-type transporter, periplasmic subunit family 3 [Lactobacillus buchneri NRRL B-30929] Length = 284 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 62/261 (23%), Positives = 105/261 (40%), Gaps = 26/261 (9%) Query: 1 MYKDFF------VSILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGLV 45 M K F VS+ ++L T + + IKK G ++ + L Sbjct: 1 MKKRSFTRIIAVVSVFAALLLVLTGCGNSKKSSSQSNNPSSVQQIKKNGTIRIAVFGDLP 60 Query: 46 GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 + V +G G+DV ++ + ++++ +NA R AL S ++D++ N Sbjct: 61 PYGWVNKDGKRVGYDVTLAHQVAKDLGVK---VKFVQVNANNRVDALNSNKVDLVLANFT 117 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 T R + F G + K K I+ SQL G ++ V GTT E +YF Sbjct: 118 VTPER--KQVIDFAKPYMKVSVGVVSPKNKAITKASQLKGKNVIVTKGTTAE----NYFT 171 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 + + F+ + A + R A D S LYA + D P+ V + I KS Sbjct: 172 SKQPDVKLLKFDSKTQQFNALKNGRGVALADDNSYLYAW--SKDNPNYTVGIKSIGPKSY 229 Query: 226 LAPAIIQGDTEWYNIVSWTHY 246 +APA+ +G+ + + Sbjct: 230 IAPAVKKGNKSLLDWNNKEIN 250 >gi|315925538|ref|ZP_07921748.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315621079|gb|EFV01050.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 272 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 89/254 (35%), Gaps = 13/254 (5%) Query: 1 MYKDFFVSILCLIILF----FTSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGD 55 M K + +++ I S ++K G++ Sbjct: 1 MKKKWLAALMTAAIAVAALAGCGASNKQDSKAEVKNDSKTFVIGVDDTFPPMGFRNKKNQ 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D R + + K + +N + + L++ +ID + T R+ Sbjct: 61 IVGFDIDMAREAAKRM---NLKFKVQAINWDTKEMELKNDKIDAIWNGLSITDERKK--A 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK-YHPI 174 + F + Q ++ K GI + + L+G ++ Q G++ E L D +K Sbjct: 116 MDFTKPYLENDQVIVVKKDSGIKTKADLAGKTVGCQKGSSAEDALMDDAVGKKIKGGQAT 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F+ A R DA D + A S+ +L + +S A+ +G+ Sbjct: 176 EFDENVSAFEDLNAGRIDAMVVDS--VVARYYIAKHKSDFKVLGESLSPEQYGVAVKKGN 233 Query: 235 TEWYNIVSWTHYAM 248 T+ + + M Sbjct: 234 TQMCDAIQRALDDM 247 >gi|293567503|ref|ZP_06678848.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E1071] gi|291589746|gb|EFF21549.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E1071] Length = 271 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 86/265 (32%), Gaps = 11/265 (4%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F+ L +L F S T+A I + + G++ V NG Sbjct: 1 MKKTSFLFALIAGLLLFAGCSNKKTSADNWATINEEKKIVIGLDDTFVPMGFRDKNGKLT 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + + P++ + L + ID++ T RE + Sbjct: 61 GFDIDLAKAVFEQYG---ITVDFQPIDWSMKEFELNNGTIDLIWNGYSKTPAREK--KVQ 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 F + Q I K+ GI++ Q++ + Q G++ + K + Sbjct: 116 FTKPYMENDQVLITPKESGITNFGQMNNKRLGAQNGSSGYDVFTKQPEVLKEIVKNQDAV 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ E ++ R D D + + I A + D Sbjct: 176 LYDSFNEALIDLKSRRVDGLLMDKVYADYYLKQRNELEDFNITKGSYESEDFAVGARKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259 + ++ + E Sbjct: 236 STLVKKINEALDQLEKTGEFQKISD 260 >gi|305663952|ref|YP_003860240.1| extracellular solute-binding protein family 3 [Ignisphaera aggregans DSM 17230] gi|304378521|gb|ADM28360.1| extracellular solute-binding protein family 3 [Ignisphaera aggregans DSM 17230] Length = 260 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 81/223 (36%), Gaps = 11/223 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ G + F + G+ G D+D + LS+ I D + + AL + Sbjct: 39 KIRVGTSPDFPPFEYIDDKGNIVGIDIDMMKILSNKIGCDMEIVSI---DFNGLIPALIN 95 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQA 152 QID+++ T R + F + Q ++ K I S++ L + VQ+ Sbjct: 96 NQIDVIASGMTITEERAKVVA--FTKPYWSADQAIVIRKDANINPQSLNDLVNLRVGVQS 153 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GTT E ++++ + + + ++ A R DA D Sbjct: 154 GTTAEQMISEFVSSTGKNINMVSYQSYVLAIQDLLAGRLDAVVVDSPVANMFVKQY---- 209 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 I I + A+ + +TE N ++ + ++E Sbjct: 210 NVKISNIITTNESYGLAVRKDNTELLNKLNKALDEFLNSDEWQ 252 >gi|313497437|gb|ADR58803.1| Extracellular solute-binding protein [Pseudomonas putida BIRD-1] Length = 305 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 86/237 (36%), Gaps = 8/237 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81 L IK+ G + G + F+ + + G+ D A+ A+ K++Y Sbjct: 28 GTLKKIKESGTITLGHRDSSIPFSYLAGKSEPVGYSHDIQLAVVDALKKQLGTDIKVRYN 87 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GIS 138 + ++ R +Q+ +D+ +T + R+ +G F + G + K Sbjct: 88 LVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVG--FSVGIFEVGTRLLTKVKDGQPAYK 145 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGTT+E L MK + I + E + R A+ D Sbjct: 146 DFPDLAGKNVVTTAGTTSERILKAMNADKQMKMNVISAKDHGEAFNMLESGRAVAFMMDD 205 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L +P++ VI S + + D + V A + E+ Sbjct: 206 ALLAGEMAKARKPADWVITGTPQSYEIYGCMVRKDDAAFKKAVDDAIVAYFKSGEVN 262 >gi|254829260|ref|ZP_05233947.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165] gi|258601672|gb|EEW14997.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165] Length = 271 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 89/250 (35%), Gaps = 11/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S++ S IKK + G++ V + + Sbjct: 1 MKKGLLITVMLMVMLALGACSSSESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + ++ P++ + L++ ID++ T R+ + Sbjct: 61 GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 F + Q + K I+ S + ++ Q G ++ +A + P Sbjct: 116 FSQPYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATDFAVGMRKSD 235 Query: 235 TEWYNIVSWT 244 + ++ Sbjct: 236 KKLQTKINEA 245 >gi|148989071|ref|ZP_01820471.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP6-BS73] gi|149010672|ref|ZP_01832043.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP19-BS75] gi|147765153|gb|EDK72082.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP19-BS75] gi|147925568|gb|EDK76645.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP6-BS73] Length = 286 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 27/259 (10%) Query: 1 MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44 M K + L F + + A + +IKK G L+ + Sbjct: 1 MKLFKPLLTVLALAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V +G ++G+D++ L+ + ++Y+ ++A R L S ++DI N Sbjct: 61 KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYISVDAANRAEYLISNKVDITLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + K I+ V QL G ++ V GTT E F Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + ++ + +++ + A R DA++ D + + A + V + + Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229 Query: 225 PLAPAIIQGDTEWYNIVSW 243 +A A+ +G+ E + ++ Sbjct: 230 TIAAAVQKGNQELLDFINK 248 >gi|257885500|ref|ZP_05665153.1| extracellular solute-binding protein [Enterococcus faecium 1,231,501] gi|257821356|gb|EEV48486.1| extracellular solute-binding protein [Enterococcus faecium 1,231,501] Length = 271 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 86/265 (32%), Gaps = 11/265 (4%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F+ L +L F S T+A I + + G++ V +G Sbjct: 1 MKKTSFLFALIAGLLLFAGCSNKKTSADNWATINEEKKIVIGLDDTFVPMGFRDKDGKLT 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + + P++ + L + ID++ T RE + Sbjct: 61 GFDIDLAKAVFEQYG---ITVDFQPIDWSMKEFELNNGTIDLIWNGYSKTPAREK--KVQ 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 F + Q I K+ GI++ Q++ + Q G++ + K + Sbjct: 116 FTKPYMENDQVLITPKESGITNFGQMNNKRLGAQNGSSGYDVFTKQPEVLKEIVKNQDAV 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ E ++ R D D + + I A + D Sbjct: 176 LYDSFNEALIDLKSRRVDGLLMDKVYADYYLKQGNELEDFNITKGSYESEDFAVGARKSD 235 Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259 + ++ + E Sbjct: 236 STLVKKINEALDQLEKTGEFQKISD 260 >gi|205356404|ref|ZP_03223169.1| probable ABC type amino-acid transporter periplasmic solute binding protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205345789|gb|EDZ32427.1| probable ABC type amino-acid transporter periplasmic solute binding protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 259 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 59/245 (24%), Positives = 96/245 (39%), Gaps = 10/245 (4%) Query: 2 YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKG 58 K + + F++ + L IK +G L G+ + +A + G+ KG Sbjct: 4 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQVTGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + +D + T R+ F Sbjct: 64 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 121 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + + K + F Sbjct: 122 SEPYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R DA++ D S L ILPD + D + Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 236 Query: 239 NIVSW 243 V Sbjct: 237 KYVDD 241 >gi|313623355|gb|EFR93580.1| amino acid ABC transporter, amino acid-binding protein [Listeria innocua FSL J1-023] Length = 271 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 88/250 (35%), Gaps = 11/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S+ S IKK + G++ V + + Sbjct: 1 MKKGLLITVMAIVMLALGACSSGESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ ++ P++ + L++ ID++ T R+ + Sbjct: 61 GFDIDLAKAVFEEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 F + Q + K I+ S + ++ Q G ++ +A + P Sbjct: 116 FSKPYMKNEQVLVTLKSSNINKFSDMKDKTLGAQNGASSIDDMAKKPEVLTDIIKNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDPTDFAVGMRKSD 235 Query: 235 TEWYNIVSWT 244 E + ++ Sbjct: 236 KELQSKINEA 245 >gi|330836288|ref|YP_004410929.1| amino acid ABC transporter substrate-binding protein, PAAT family [Spirochaeta coccoides DSM 17374] gi|329748191|gb|AEC01547.1| amino acid ABC transporter substrate-binding protein, PAAT family [Spirochaeta coccoides DSM 17374] Length = 268 Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 86/252 (34%), Gaps = 11/252 (4%) Query: 1 MYKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K + ++ L + + + S L I+ RG G++ N + Sbjct: 1 MKKTLALCVMILAAVSLFAAGSKESGEDSSLKKIQDRGTFILGLDDTFPPMGFRNENNEI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D R ++ + + P++ + L + +ID + T R+ + Sbjct: 61 VGFDIDLAREVTKRMG---VTLLLQPIDWNAKEQELNTGKIDCIWNGFTVTEERKKV--V 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + Q ++ +++++ L+G SI +QAG++ + + F Sbjct: 116 NFSEPYLENAQVAVVKTSSAVTTLADLAGKSIGLQAGSSASNAVDAAPVFKASLKGIVEF 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + DA D L A + IL + ++ A + D Sbjct: 176 KENLTALMDLEIGGVDAVIVD--LLVANDNIKRSGKDFRILDESLAPENYAIGFRKNDNA 233 Query: 237 WYNIVSWTHYAM 248 N V M Sbjct: 234 LRNAVQKHLDDM 245 >gi|16800916|ref|NP_471184.1| hypothetical protein lin1849 [Listeria innocua Clip11262] gi|16414351|emb|CAC97080.1| lin1849 [Listeria innocua Clip11262] Length = 271 Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 88/250 (35%), Gaps = 11/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S+ S IKK + G++ V + + Sbjct: 1 MKKGLLITVMAIVMLALGACSSGESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ ++ P++ + L++ ID++ T R+ + Sbjct: 61 GFDIDLAKAVFEEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 F + Q + K I+ S + ++ Q G ++ +A + P Sbjct: 116 FSKPYMKNEQVLVTLKSSNINKFSDMKDKTLGAQNGASSIDDMAKKPEVLTDIIKNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYTIITGGFDPTDFAVGMRKSD 235 Query: 235 TEWYNIVSWT 244 E + ++ Sbjct: 236 KELQSKINEA 245 >gi|288905435|ref|YP_003430657.1| amino acid ABC transporter, substrate binding protein [Streptococcus gallolyticus UCN34] gi|306831516|ref|ZP_07464674.1| ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|288732161|emb|CBI13726.1| Putative amino acid ABC transporter, substrate binding protein [Streptococcus gallolyticus UCN34] gi|304426301|gb|EFM29415.1| ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 292 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 11/225 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + A L +IK+ G +K G+ + F V GD++G+DV F L+ + D + Sbjct: 39 GNTAKARTLDEIKESGTIKIGVFSDKKPFGYVDDKGDYQGYDVYFADRLAKDLGVD---V 95 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y+ ++ R L S ++DI+ N T R + F G + K IS Sbjct: 96 EYVAVDPASRVEYLTSAKVDIILANFTVTDERAE--QVDFALPYMKVALGVVSPSSKLIS 153 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 SV L G ++ V GTT E F+ + K + + +++ E A R DA + D Sbjct: 154 SVDDLEGKTLIVGKGTTAETY----FEKNYPKVNLLKYDQYSEAYQALLDGRGDALSTDN 209 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + + A + V + + +APA+ +G+TE + ++ Sbjct: 210 TEVLAWA--LENKGYEVGITSLGDTDTIAPAVQKGNTELLDWIND 252 >gi|225856389|ref|YP_002737900.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Streptococcus pneumoniae P1031] gi|225726288|gb|ACO22140.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Streptococcus pneumoniae P1031] Length = 288 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 27/259 (10%) Query: 1 MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44 M K + L F + + A + +IKK G L+ + Sbjct: 1 MKLFKPLLTVLALAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V +G ++G+D++ L+ + ++Y+ ++A R L S ++DI N Sbjct: 61 KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYISVDAANRAEYLISNKVDITLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + K I+ V QL G ++ V GTT E F Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + ++ + +++ + A R DA++ D + + A + V + + Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229 Query: 225 PLAPAIIQGDTEWYNIVSW 243 +A A+ +G+ E + ++ Sbjct: 230 TIAAAVQKGNQELLDFINK 248 >gi|169832728|ref|YP_001694168.1| amino acid ABC transporter periplasmic protein [Streptococcus pneumoniae Hungary19A-6] gi|168995230|gb|ACA35842.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae Hungary19A-6] Length = 288 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 27/259 (10%) Query: 1 MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44 M K + L F + + A + +IKK G L+ + Sbjct: 1 MKLFKPLLTVLALAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V +G ++G+D++ L+ + ++Y+ ++A R L S ++DI N Sbjct: 61 KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYISVDAANRAEYLISNKVDITLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + K I+ V QL G ++ V GTT E F Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + ++ + +++ + A R DA++ D + + A + V + + Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229 Query: 225 PLAPAIIQGDTEWYNIVSW 243 +A A+ +G+ E + ++ Sbjct: 230 TIAAAVQKGNQELLDFINK 248 >gi|254252393|ref|ZP_04945711.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] gi|124895002|gb|EAY68882.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] Length = 271 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 63/253 (24%), Positives = 95/253 (37%), Gaps = 11/253 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + L L + +A L DI+K G L+ F V A G Sbjct: 1 MKIHTLATWLIGAALVTAGAAAHADRLDDIRKAGVLRVATFDSNPPFGYVDAKSNRIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + +Q P N R L S ++D++ N T R + F Sbjct: 61 DVDYAKALADKLGVK---LQLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F+ K + S QL+G I GTT E+TL + F + ++ Sbjct: 116 IPYFSSGQQFLAKKG-VLKSADQLNGLRIGADKGTTNEITLREKFPKA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I P IS + + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPPFTISNDYMGVGVPKGETRLLG 230 Query: 240 IVSWTHYAMVTAE 252 V+ T + + Sbjct: 231 FVNDTLKGLEASG 243 >gi|315030715|gb|EFT42647.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX4000] Length = 275 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 99/272 (36%), Gaps = 28/272 (10%) Query: 1 MYK--DFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGL 44 M K + + L++ ++ S + +KK G +K G+ + Sbjct: 1 MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTVTVEQLKKAGKIKIGVKEDI 60 Query: 45 VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F + + +G + D R ++ I ++++ + AK R L + ++D++ Sbjct: 61 PNFGYMNPDTNKNEGMEPDIARLIAKEITGSEENVEFVGVTAKTRGPLLDNGELDMVIAT 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + F Y D GF++ K+ SS+ L G +I V TT+ L Sbjct: 121 FTITDERKKT--YNFTTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 178 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + +K+ E+ A + R DA++ D S L IL D S Sbjct: 179 AQEEGIKFTYQELGSYPELKTALTSKRIDAFSVDKSILSGYVDGKT-----EILKDGFSP 233 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + +TE + ++ E Sbjct: 234 QEYGITTKKANTEL----NDYLNGLIEKWEKD 261 >gi|313123232|ref|YP_004033491.1| glutamine ABC transporter, glutamine-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279795|gb|ADQ60514.1| Glutamine ABC transporter, glutamine-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 281 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 100/257 (38%), Gaps = 17/257 (6%) Query: 1 MYKDF--FVSILCLIILFF----TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-AN 53 M + +++ +++L S S ++S +K+ + G+ F+ + + Sbjct: 1 MARKLRELTALMAVLLLSLVFTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDS 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+VD RA++ I K++ ++ K R + L+ +D + T R Sbjct: 61 GKATGFEVDLARAITKQILGPKGKMKIEYISEKSRIMDLKIGNVDAVMATMTNTPDRRKI 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKY 171 + F + G+ I+ KK ++S+ + + G+T + + Y Sbjct: 121 --INFSDTYFMAGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAPKA---- 174 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 I ++ A ++ + +A D + L L + +LPD + P I Sbjct: 175 RVIFYDDYGSCYNALKSGKANAMVSDNAVLAGLISDDKDK--FKMLPDTFTVEPYGIGIK 232 Query: 232 QGDTEWYNIVSWTHYAM 248 +G+ ++ V+ + Sbjct: 233 KGEDKFTAEVNQALKVL 249 >gi|310644452|ref|YP_003949211.1| amino-acid abc transporter periplasmic solute-binding protein [Paenibacillus polymyxa SC2] gi|309249403|gb|ADO58970.1| Amino-acid ABC transporter periplasmic solute-binding protein [Paenibacillus polymyxa SC2] Length = 292 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 10/232 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 +S S + + DIKK G ++ G+ F V + G +GFDV + + + D Sbjct: 32 GSSSGSAKFASIEDIKKNGKIRIGVFADKPPFGYVDSEGKNQGFDVYIAKRFAKDLLGDE 91 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 SK++++ ++A R L+S ++DI+ N T R+ + F G + Sbjct: 92 SKVEFVLVDAASRVAYLESNKVDIIMANFTVTDERKE--KVDFANPYMKLSFGIVSPDSA 149 Query: 136 GISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I+++ QL G + V GTT E F + + F++ EI +A + R A Sbjct: 150 PITTIDQLKGSDQKLIVAKGTTAETY----FTKNYPDIKLLKFDQYTEIFSALKDKRGAA 205 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D + L A P V +P + +APA+ +G+ E + ++ Sbjct: 206 IANDNTELIAWA--KANPGFTVSIPAFGGQDTIAPAVAKGNKELLDWINNEL 255 >gi|312903652|ref|ZP_07762828.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0635] gi|310633005|gb|EFQ16288.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0635] gi|315577480|gb|EFU89671.1| putative adhesin/ABC transporter aspartate/glutamate-binding protein [Enterococcus faecalis TX0630] Length = 287 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 99/272 (36%), Gaps = 28/272 (10%) Query: 1 MYK--DFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGL 44 M K + + L++ ++ S + +KK G +K G+ + Sbjct: 13 MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTVTVEQLKKAGKIKVGVKEDI 72 Query: 45 VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F + + +G + D R ++ I ++++ + AK R L + ++D++ Sbjct: 73 PNFGYMNPDTNKNEGMEPDIARLIAKEITGSEENVEFVGVTAKTRGPLLDNGELDMVIAT 132 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + F Y D GF++ K+ SS+ L G +I V TT+ L Sbjct: 133 FTITDERKKT--YNFTTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 190 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + +K+ E+ A + R DA++ D S L IL D S Sbjct: 191 AQEEGIKFTYQELGSYPELKTALTSKRIDAFSVDKSILSGYVDGKT-----EILKDGFSP 245 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + +TE + ++ E Sbjct: 246 QEYGITTKKANTEL----NDYLNGLIEKWEKD 273 >gi|89896133|ref|YP_519620.1| hypothetical protein DSY3387 [Desulfitobacterium hafniense Y51] gi|89335581|dbj|BAE85176.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 263 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 93/249 (37%), Gaps = 10/249 (4%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K V++ + + L +++S +++ + G++ G+ GF Sbjct: 4 MKKWVAVAMTVLMSGLLLAGCGSSSSAGDAVQQ--KIVIGLDDTFAPMGFRDDGGNLVGF 61 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD + ++S + ++++ P++ + + L SK+ID++ T R +AF Sbjct: 62 DVDMAKEVASRL---DMEVEFKPIDWNSKEVELNSKKIDMIWNGLTITKER--LEKIAFS 116 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ I + + L+G + Q G+++ L + + Sbjct: 117 KPYMANRQIVVVLSGSDIKTKADLAGKVVGTQEGSSSVDALNAEPEVTGTFKELRTYADF 176 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R +A GD L N +P + D + + + DTE Sbjct: 177 VAVLNELSIGRVEAVVGDEVVL--KYYMNKKPGTFAAIEDNFGEEEYGVGLRKDDTELLG 234 Query: 240 IVSWTHYAM 248 + AM Sbjct: 235 KLQGALDAM 243 >gi|324992111|gb|EGC24033.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK405] gi|324994205|gb|EGC26119.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK678] gi|327459422|gb|EGF05768.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1] gi|327472830|gb|EGF18257.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK408] Length = 291 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 101/262 (38%), Gaps = 30/262 (11%) Query: 1 MY--KDFFVSILCLIILFFTSFSTN-----------------ASILGDIKKRGFLKCGIN 41 M K F + F + ++ A L +IKK G L+ + Sbjct: 1 MKLSKTIFALTTLTLAFFLVACGSSSKKDAGNKDAASSKTVKARSLEEIKKSGKLRIAVF 60 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 + F V NG ++G+D+ L+ + P Y+P++A R L S ++DI Sbjct: 61 SDKKPFGYVDNNGKYQGYDIYLGDQLAKDLGVKPE---YVPVDAANRAEYLISNKVDITL 117 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 N T R+ + F G + K I+ QL G ++ + GTT E Sbjct: 118 ANFTVTDERKK--QVDFALPYMKVSLGVVSPKGSVITKPEQLEGKTLIITKGTTAETY-- 173 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 F+ + +++ + A R DA++ D + + A + V + + Sbjct: 174 --FEKNYPNIKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLG 229 Query: 222 SKSPLAPAIIQGDTEWYNIVSW 243 +APA+ +G+TE N ++ Sbjct: 230 DPDTIAPAVQKGNTELLNYIND 251 >gi|153011819|ref|YP_001373032.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151563707|gb|ABS17203.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 260 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 95/255 (37%), Gaps = 11/255 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F++ + ++ F + +A +L DI R ++ + T F V ++ +G D Sbjct: 1 MKTKLFIAAMAALVTSFVAAPASADMLDDIIARKTIRVAVPTDYPPFGSVGSDMQPQGMD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D R ++ ++ + ++ +P+ A R LQ+ + D+ + T R + F Sbjct: 61 IDMARLIAKSLGVE---VELIPVTAPNRVAYLQTGKSDLTISSLGKTEERAKV--IDFSI 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 K I L+G +I V G+ + L + FE Sbjct: 116 AYSPFFDAVFGAKNPPIEKHEDLTGHTIAVTRGSMQDQELEELAP----GAVVKRFEDNN 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 AA+ + + + A+K + + L +++ SP + +G+T Sbjct: 172 STIAAFISGQVAMFASGTPVAAAIKKRSPDLD--LELKIVLANSPCYVGVAKGETRLLEK 229 Query: 241 VSWTHYAMVTAEELG 255 V+ + E+ Sbjct: 230 VNSIIREAKASGEVD 244 >gi|46907968|ref|YP_014357.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes str. 4b F2365] gi|217964115|ref|YP_002349793.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes HCC23] gi|226224341|ref|YP_002758448.1| amino acid ABC transporter (binding protein) [Listeria monocytogenes Clip81459] gi|254826018|ref|ZP_05231019.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194] gi|254993941|ref|ZP_05276131.1| amino acid ABC transporter (binding protein) [Listeria monocytogenes FSL J2-064] gi|255520512|ref|ZP_05387749.1| amino acid ABC transporter (binding protein) [Listeria monocytogenes FSL J1-175] gi|290893395|ref|ZP_06556380.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071] gi|46881238|gb|AAT04534.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes serotype 4b str. F2365] gi|217333385|gb|ACK39179.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes HCC23] gi|225876803|emb|CAS05512.1| Putative amino acid ABC transporter (binding protein) [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|290557046|gb|EFD90575.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071] gi|293595257|gb|EFG03018.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194] gi|307571318|emb|CAR84497.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes L99] gi|313608294|gb|EFR84286.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes FSL F2-208] Length = 271 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 88/250 (35%), Gaps = 11/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S+ S IKK + G++ V + + Sbjct: 1 MKKGLLITVMLMVMLALGACSSGESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + ++ P++ + L++ ID++ T R+ + Sbjct: 61 GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 F + Q + K I+ S + ++ Q G ++ +A + P Sbjct: 116 FSQPYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATDFAVGMRKSD 235 Query: 235 TEWYNIVSWT 244 E ++ Sbjct: 236 KELQTKINEA 245 >gi|107026160|ref|YP_623671.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116692656|ref|YP_838189.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|170738094|ref|YP_001779354.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|105895534|gb|ABF78698.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116650656|gb|ABK11296.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] gi|169820282|gb|ACA94864.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 298 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 44/225 (19%), Positives = 77/225 (34%), Gaps = 6/225 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQY 80 L IK G + GI V F+ G+ D + + + ++ Sbjct: 27 GTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIGYSRDIASRVIDQLKTELNLPNLAVKE 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ ID +T TL R+ F + G F K G+ Sbjct: 87 IPITSQNRIPLLQNGTIDFECGSTTNTLERQRQAA--FSNSIFLYGIRFSTRKDSGVKDF 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+G ++ AGT+ E L + M I + E R A+ D Sbjct: 145 ADLAGKTVATTAGTSDERLLRKLNEEKAMNMTIISAKDHAEAFMNVTTGRAVAFVMDEPL 204 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 LY + P + + + A + + D + +V Sbjct: 205 LYGEIAKDRNPGAYTVAGTPLVHENYACMMRRDDPAFKRVVDGVI 249 >gi|309779093|ref|ZP_07673860.1| extracellular solute-binding protein [Ralstonia sp. 5_7_47FAA] gi|308922158|gb|EFP67788.1| extracellular solute-binding protein [Ralstonia sp. 5_7_47FAA] Length = 295 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 66/307 (21%), Positives = 106/307 (34%), Gaps = 65/307 (21%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQ 79 A L DIKK G L+ G+ F A G+ G DVD+ + +++ + ++ Sbjct: 43 QARADKLDDIKKAGVLRVGVFDANPPFGYADAKTGEPVGLDVDYAQEIANKLGVK---LE 99 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 N R L S ++DI++ N T R+ + F + G FI K + Sbjct: 100 LRATNPANRVPLLTSGKVDIVAANFTITDERKK--QIEFSTPYFASGLQFIAKKG-VLKQ 156 Query: 140 VSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L G + V GTT E TL + + I ++ A R A+ D Sbjct: 157 PDDLKKDGIRLGVDKGTTQETTLREGYP----NARVIAYDDSPLALTALRTGAIQAFAQD 212 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + L AL T SE I P ++++ + + +G+T+ + Sbjct: 213 GAKLGALLATLPNRSELEISPFVLTREYMGIGVPKGETKLTATIDQILQ----------- 261 Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317 GL KD G G ++DR G + Sbjct: 262 --------------------------------GLEKD---------GTAGRIYDRWFGPK 280 Query: 318 SELKIPR 324 S +PR Sbjct: 281 SAAPLPR 287 >gi|254248250|ref|ZP_04941570.1| Extracellular solute-binding protein, family 3 [Burkholderia cenocepacia PC184] gi|124874751|gb|EAY64741.1| Extracellular solute-binding protein, family 3 [Burkholderia cenocepacia PC184] Length = 298 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 44/225 (19%), Positives = 77/225 (34%), Gaps = 6/225 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQY 80 L IK G + GI V F+ G+ D + + + ++ Sbjct: 27 GTLKKIKDTGVVSLGIRESSVPFSYSDNQQKNIGYSRDIASRVIDQLKTELNLPNLAVKE 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ ++ R LQ+ ID +T TL R+ F + G F K G+ Sbjct: 87 IPITSQNRIPLLQNGTIDFECGSTTNTLERQRQAA--FSNSIFLYGIRFSTRKDSGVKDF 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+G ++ AGT+ E L + M I + E R A+ D Sbjct: 145 ADLAGKTVATTAGTSDERLLRKLNEEKAMNMTIISAKDHAEAFMNVTTGRAVAFVMDEPL 204 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 LY + P + + + A + + D + +V Sbjct: 205 LYGEIAKDRNPGAYTVAGTPLVHENYACMMRRDDPAFKRVVDGVI 249 >gi|227903457|ref|ZP_04021262.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus acidophilus ATCC 4796] gi|227868777|gb|EEJ76198.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus acidophilus ATCC 4796] Length = 284 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 100/251 (39%), Gaps = 14/251 (5%) Query: 1 MYKDFFVS--ILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M K +F+S ++ L+ + ++ N SI +K+ + G+ F + +G Sbjct: 13 MRKKYFLSTFLIALLAITLSACGQNKNQSIYQTVKETKSITWGVKADTPLFGSMSIKDGK 72 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GF++D AL+ I +K ++ A + L+++ +D + T R+ Sbjct: 73 VRGFEIDLAEALTHKILGKQAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPERKK--Q 130 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + GQ ++ K I++V L+ + + GTT+ + + + Sbjct: 131 VEFSKPYFPAGQSIMVAKNSKINNVKDLNNKRVLIVKGTTSADAVRKFAPKA----EILQ 186 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + AA +A + DA+ D L S + I + P A+ +G Sbjct: 187 FDDYGQAFAALKADQGDAFVTDNGILAG---ILRDNSGYKIAGGTFTNQPYGIAVNKGQN 243 Query: 236 EWYNIVSWTHY 246 E ++ Sbjct: 244 EMMEHINLALT 254 >gi|190403010|gb|ACE78173.1| periplasmic amino acid-binding protein [Campylobacter jejuni] Length = 259 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 59/245 (24%), Positives = 96/245 (39%), Gaps = 10/245 (4%) Query: 2 YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K + + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 4 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + +D + T R+ F Sbjct: 64 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 121 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + + K + F Sbjct: 122 SEPYYQDAIGLLVLKEKKYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA R DA++ D S L ILPD + D + Sbjct: 182 YPSIKAALDVKRVDAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 236 Query: 239 NIVSW 243 V Sbjct: 237 KYVDD 241 >gi|58336899|ref|YP_193484.1| glutamine ABC transporter [Lactobacillus acidophilus NCFM] gi|58254216|gb|AAV42453.1| glutamine ABC transporter [Lactobacillus acidophilus NCFM] Length = 272 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 100/251 (39%), Gaps = 14/251 (5%) Query: 1 MYKDFFVS--ILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M K +F+S ++ L+ + ++ N SI +K+ + G+ F + +G Sbjct: 1 MRKKYFLSTFLIALLAITLSACGQNKNQSIYQTVKETKSITWGVKADTPLFGSMSIKDGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GF++D AL+ I +K ++ A + L+++ +D + T R+ Sbjct: 61 VRGFEIDLAEALTHKILGKQAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPERKK--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + GQ ++ K I++V L+ + + GTT+ + + + Sbjct: 119 VEFSKPYFPAGQSIMVAKNSKINNVKDLNNKRVLIVKGTTSADAVRKFAPKA----EILQ 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + AA +A + DA+ D L S + I + P A+ +G Sbjct: 175 FDDYGQAFAALKADQGDAFVTDNGILAG---ILRDNSGYKIAGGTFTNQPYGIAVNKGQN 231 Query: 236 EWYNIVSWTHY 246 E ++ Sbjct: 232 EMMEHINLALT 242 >gi|254932817|ref|ZP_05266176.1| amino acid ABC transporter [Listeria monocytogenes HPB2262] gi|293584370|gb|EFF96402.1| amino acid ABC transporter [Listeria monocytogenes HPB2262] gi|328473972|gb|EGF44788.1| amino acid ABC transporter (binding protein) [Listeria monocytogenes 220] Length = 271 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 87/250 (34%), Gaps = 11/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S+ S IKK + G++ V + + Sbjct: 1 MKKGLLITVMLMVMLALGACSSGESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + ++ P++ + L++ ID++ T R+ + Sbjct: 61 GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 F + Q + K I+ S + ++ Q G ++ +A + P Sbjct: 116 FSQPYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ + + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNTITGGFDATDFAVGMRKSD 235 Query: 235 TEWYNIVSWT 244 E ++ Sbjct: 236 KELQTKINEA 245 >gi|229590085|ref|YP_002872204.1| putative ABC-type amino-acid transporter periplasmic solute-binding protein [Pseudomonas fluorescens SBW25] gi|229361951|emb|CAY48851.1| putative ABC-type amino-acid transporter periplasmic solute-binding protein [Pseudomonas fluorescens SBW25] Length = 282 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 101/257 (39%), Gaps = 4/257 (1%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + + S L D+ KRG L G + + A+G +GFD+D R Sbjct: 12 VFLFAASASLASVVQAADSKLDDVLKRGHLIVGTGSTNAPWHFQGADGKLQGFDIDIGRI 71 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ +F+DPSK++++ ++ R L + ++D+ + T R + +AF Y +G Sbjct: 72 VAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDMSCQFITVTASR--AQQVAFTLPYYREG 129 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 G ++ + L A V + + K ++ V+ + A Sbjct: 130 VGLLLPNNSKYKEIEDLQAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAV 189 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + R DA D S+ L P + S A A+ +GD +W N V+ + Sbjct: 190 NSGRADAAATDQSS--VKYLMVQNPGRYRSPAYAWSPQTYACAVKRGDQDWLNFVNTALH 247 Query: 247 AMVTAEELGITQKNINQ 263 +T E + + Q Sbjct: 248 EAMTGVEFPTYKASFKQ 264 >gi|153010817|ref|YP_001372031.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151562705|gb|ABS16202.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 258 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 90/249 (36%), Gaps = 11/249 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M I + +A L +K+ G L+ G++ F+ V GFD Sbjct: 1 MKTLLSSLIAAGVGALMMLAPAHADDLEKVKQSGELRIGMSGVFPPFSFVDGQNQVVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + P + L++ + D++ + T RE + F Sbjct: 61 VDIGTEIAKRLDVKPVVVTI---AFDGIIAGLRAGKFDVVVGSMSITPEREK--AVDFAG 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G+G + + + S+ +L G +I V G T++ + + ++ + Sbjct: 116 PYYRGGRGIFVTETSPVKSMDELKQGKTIAVTLGETSDKWARE-----QGGWTVRTYKGI 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ R+ R DA D + + + P++ + A+ +G+ E + Sbjct: 171 PELLLELRSGRVDAIASDDIPILIAIKESGEKVRQLDTPELQGTDNVGIALRKGNPELKD 230 Query: 240 IVSWTHYAM 248 ++ M Sbjct: 231 AINKALDDM 239 >gi|241663664|ref|YP_002982024.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|240865691|gb|ACS63352.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 307 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 85/245 (34%), Gaps = 7/245 (2%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---F 72 + + + L IK+ G + G + F+ G+ + + + + Sbjct: 26 STGAQAQSNDTLAKIKQSGVISVGYRESSIPFSYQADANTITGYSQEISNMIVAGVEKAV 85 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +++ P+ ++ R LQ+ ID +T L R+ + F + G ++ Sbjct: 86 GKKLQVKLTPITSQNRISLLQNGTIDFECGSTTNNLERQKQVA--FSNNIFIYGMLMLVK 143 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERVEEIDAAYRAHR 190 K GI L G ++ AGTT + L K + I+ + + + R Sbjct: 144 KDSGIKDFPDLKGKTVVTTAGTTEDRILQKMNGEAKDADKMNLILAKDHGQAFLTLESGR 203 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A+ D LY + ++ V+ + A + + D + + ++ Sbjct: 204 AVAFVMDEPLLYGERTKAKNQADWVVTGTPLQTETYACMMRKDDPAFKKVADDVIADLMK 263 Query: 251 AEELG 255 + + Sbjct: 264 SGKAN 268 >gi|325978425|ref|YP_004288141.1| amino acid ABC transporter substrate binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178353|emb|CBZ48397.1| amino acid ABC transporter, substrate binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 292 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 11/225 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + A L +IK+ G +K G+ + F V GD++G+DV F L+ + D + Sbjct: 39 GNTAKARTLDEIKESGTIKIGVFSDKKPFGYVDDKGDYQGYDVYFADRLAKDLGVD---V 95 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y+ ++ R L S ++DI+ N T R + F G + + IS Sbjct: 96 EYVAVDPASRVEYLTSAKVDIILANFTVTDERAE--QVDFALPYMKVALGVVSPSSQLIS 153 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 SV L G ++ V GTT E F+ + K + + +++ E A R DA + D Sbjct: 154 SVDDLEGKTLIVGKGTTAETY----FEKNYPKVNLLKYDQYSEAYQALLDGRGDALSTDN 209 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + + A + V + + +APA+ +G+T + ++ Sbjct: 210 TEVLAWA--LENKGYEVGITSLGDTDTIAPAVQKGNTALLDWIND 252 >gi|299066136|emb|CBJ37319.1| glutamate/aspartate ABC transporter,periplasmic binding subunit [Ralstonia solanacearum CMR15] Length = 308 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 87/237 (36%), Gaps = 8/237 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSK 77 + L IK+ G + G + F+ ++G+ G+ + + + + Sbjct: 32 QSNDTLAKIKQSGVISVGYRESSIPFSYEASSGNITGYSQEISNLIVDGVKKKLGLSGLQ 91 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ P+ ++ R LQ+ ID +T L R+ + F + G ++ K GI Sbjct: 92 VKLTPITSQNRIPLLQNGTIDFECGSTTNNLERQKQVA--FSNNIFIYGMLMLVKKGAGI 149 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERVEEIDAAYRAHRCDAYT 195 L G ++ AGTT + L K + I+ + + + R A+ Sbjct: 150 KDFPDLKGKTVVTTAGTTEDRILQKMNGEAKDADKMNLILAKDHGQAFLTLESGRAVAFV 209 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 D LY + S+ V++ + A + + D + + ++T+ Sbjct: 210 MDEPLLYGERTKAKNQSDWVVVGTPLQTETYACMMRKDDPAFKKVADDVIADLMTSG 266 >gi|315282708|ref|ZP_07871055.1| amino acid ABC transporter, amino acid-binding protein [Listeria marthii FSL S4-120] gi|313613644|gb|EFR87441.1| amino acid ABC transporter, amino acid-binding protein [Listeria marthii FSL S4-120] Length = 271 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 88/250 (35%), Gaps = 11/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S++ S I K + G++ V + + Sbjct: 1 MKKGILIAVMAVVMLTLGACSSSESKEDQWERINKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + ++ P++ + L++ ID++ T R+ + Sbjct: 61 GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 F + Q + K I+ S + ++ Q G ++ +A + P Sbjct: 116 FSNPYMKNEQVLVTLKSSNINKFSDMKDKTLGAQNGASSIDDMASKPEVLTDIINNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATDFAVGMRKSD 235 Query: 235 TEWYNIVSWT 244 E ++ Sbjct: 236 KELQTKINEA 245 >gi|52425739|ref|YP_088876.1| ArtI protein [Mannheimia succiniciproducens MBEL55E] gi|52307791|gb|AAU38291.1| ArtI protein [Mannheimia succiniciproducens MBEL55E] Length = 286 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 8/227 (3%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 ++ + S + IKK ++ G+ + F V +G +GFDV+ +A++ + D Sbjct: 30 AASADNNAVSAIERIKKADKVRIGVFSDKPPFGYVDKDGKVQGFDVEIAKAVTKDLLGDE 89 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +K +++ + A R L S ++DI N T R+ + F G + + Sbjct: 90 NKAEFVLVEAANRAEYLLSNKVDITMANFTVTPERKEV--VNFAKPYMKVALGVVSKQDA 147 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ V+QL+ ++ + GTT + F + + FE+ E A R DA + Sbjct: 148 PITDVAQLADKTLLLNKGTTADAYFTKNFPKNKS----LKFEQNTETFQALLDGRGDALS 203 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 D + L+A + P V + ++ +APA+ + DT+ + Sbjct: 204 HDNTLLFAWA--KENPGYVVAIKNLGDLDYIAPAVKKEDTDLLQWLD 248 >gi|182683628|ref|YP_001835375.1| amino acid (glutamine) ABC transporter substrate binding protein [Streptococcus pneumoniae CGSP14] gi|182628962|gb|ACB89910.1| amino acid (glutamine) ABC transporter substrate binding protein [Streptococcus pneumoniae CGSP14] Length = 286 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 27/259 (10%) Query: 1 MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44 M K + L F + + A + +IKK G L+ + Sbjct: 1 MKLFKPLLTVLALAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V +G ++G+D++ L+ + ++Y+ ++A R L S ++DI N Sbjct: 61 KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYISVDAANRAEYLISNKVDITLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + K I+ V QL G ++ V GTT E F Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + ++ + +++ + A R DA++ D + + A D V + + Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LDNKGFEVGITSLGDPD 229 Query: 225 PLAPAIIQGDTEWYNIVSW 243 +A A+ +G+ E + ++ Sbjct: 230 TIAAAVQKGNQELLDFINK 248 >gi|325275178|ref|ZP_08141145.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] gi|324099665|gb|EGB97544.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] Length = 305 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 86/237 (36%), Gaps = 8/237 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81 L IK G + G + F+ + + G+ D A+ A+ K++Y Sbjct: 28 GTLKKIKDSGTITLGHRDSSIPFSYLAGKPEPVGYSHDIQLAVVDALKKQLGTDIKVRYN 87 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GIS 138 + ++ R +Q+ +D+ +T + R+ +G F + G + K Sbjct: 88 LVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVG--FSVGIFEVGTRLLTKVKDGQPAYK 145 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGTT+E L MK + I + E + R A+ D Sbjct: 146 DFPDLAGKNVVTTAGTTSERILKAMNADKQMKMNVISAKDHGEAFNMLESGRAVAFMMDD 205 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L +P++ VI S + +GD + V A + E+ Sbjct: 206 ALLAGEMAKARKPADWVITGTPQSYEIYGCMVRKGDEAFKKAVDDAIVAYFKSGEVN 262 >gi|47092892|ref|ZP_00230674.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes str. 4b H7858] gi|47018718|gb|EAL09469.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes str. 4b H7858] gi|328466491|gb|EGF37634.1| amino acid ABC transporter (binding protein) [Listeria monocytogenes 1816] Length = 271 Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 88/250 (35%), Gaps = 11/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S+ S IKK + G++ V + + Sbjct: 1 MKKGLLITVMLMVMLALGACSSGESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + ++ P++ + L++ ID++ T R+ + Sbjct: 61 GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 F + Q + K I+ S + ++ Q G ++ +A + P Sbjct: 116 FSQPYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKTEVLTDIINNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATDFAVGMRKSD 235 Query: 235 TEWYNIVSWT 244 E ++ Sbjct: 236 KELQTKINEA 245 >gi|312961374|ref|ZP_07775879.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] gi|311285032|gb|EFQ63608.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] Length = 282 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 100/257 (38%), Gaps = 4/257 (1%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + + S L + KRG L G + + A+G +GFD+D R Sbjct: 12 VFLFAASASLAGTAQAADSKLDSVLKRGHLVVGTGSTNAPWHFQGADGKLQGFDIDIGRI 71 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ +F+DPSK++++ ++ R L + ++D+ + T R + +AF Y +G Sbjct: 72 VAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDMSCQFITVTASR--AQQVAFTLPYYREG 129 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 G ++ + L A V + + K ++ V+ + A Sbjct: 130 VGLLLPNNSKYKEIEDLQAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAV 189 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + R DA D S+ L P + S A A+ +GD +W N V+ + Sbjct: 190 NSGRADAAATDQSS--VKYLMVQNPGRYRSPAYAWSPQTYACAVKRGDQDWLNFVNTALH 247 Query: 247 AMVTAEELGITQKNINQ 263 +T E + + Q Sbjct: 248 EAMTGVEFPTYKASFKQ 264 >gi|57504979|ref|ZP_00370931.1| amino acid ABC transporter, amino acid-binding protein [Campylobacter coli RM2228] gi|57019251|gb|EAL55957.1| amino acid ABC transporter, amino acid-binding protein [Campylobacter coli RM2228] Length = 241 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 8/230 (3%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFD 73 + FTS + L IK +G L G+ + +A + A G+ KGF+VD + L+ +I Sbjct: 1 MAFTSANAAEGKLEAIKAKGELVIGVKNDVPHYALLDQATGEIKGFEVDVAKMLAKSILG 60 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 D +K++ + +NAK R L + +D + T R+ F Y D G ++ K Sbjct: 61 DENKVKLIAVNAKTRGPLLDNGSVDAVIATFTITPERKRV--YNFSEPYYQDAVGLLVLK 118 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 +K S++ ++GA+I V TT+ + K +K F I AA A R DA Sbjct: 119 EKNYKSLADMNGATIGVAQAATTKKVINTAAKKIGVKVKFSEFPDYPSIKAALDAKRIDA 178 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 ++ D S L + + ILPD + D + N V+ Sbjct: 179 FSVDKSILLGY-----KDENNEILPDSFDPQSYGIVTKKDDANFSNYVND 223 >gi|327459027|gb|EGF05375.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1057] Length = 291 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 101/262 (38%), Gaps = 30/262 (11%) Query: 1 MY--KDFFVSILCLIILFFTSF------------STNASI-----LGDIKKRGFLKCGIN 41 M K F + F + + ++ L +IKK G L+ + Sbjct: 1 MKLSKTIFALTTLTLAFFLVACGTSSKKDAGNKDAASSKTVKVRSLEEIKKSGKLRIAVF 60 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 + F V NG ++G+D+ L+ + P Y+P++A R L S ++DI Sbjct: 61 SDKKPFGYVDNNGKYQGYDIYLGDQLAKDLGVKPE---YVPVDAANRAEYLISNKVDITL 117 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 N T R+ + F G + K I+ QL G ++ + GTT E Sbjct: 118 ANFTVTDERKK--QVDFALPYMKVSLGVVSPKGSVITKPEQLEGKTLIITKGTTAETY-- 173 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 F+ + +++ + A R DA++ D + + A + V + + Sbjct: 174 --FEKNYPNIKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLG 229 Query: 222 SKSPLAPAIIQGDTEWYNIVSW 243 +APA+ +G+TE N ++ Sbjct: 230 DPDTIAPAVQKGNTELLNYIND 251 >gi|163839930|ref|YP_001624335.1| glutamate-binding protein [Renibacterium salmoninarum ATCC 33209] gi|162953406|gb|ABY22921.1| glutamate-binding protein [Renibacterium salmoninarum ATCC 33209] Length = 277 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 85/227 (37%), Gaps = 10/227 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + IK G + G+ G G++ GFD++ R +++++ KIQ+ Sbjct: 30 SGSPTFDKIKSNGKITIGVKEDQPGLGFKDPATGEYSGFDIEIARWMAASLGLSADKIQF 89 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISS 139 + + R AL + Q+D+ T R+ + F + GQG ++ K I+S Sbjct: 90 QAIASSNREQALANGQVDLYVGTYSITDKRKAL--VDFAGPYFVTGQGLLVKKDNTSINS 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G ++C G+T + F F+ + + DA T D + Sbjct: 148 EKDLAGKTVCSATGSTPIQNIKAKFP----DTKTTEFDLYSKCVEQVKNGSADALTTDQA 203 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 L P ++ + + +GDT ++ T Sbjct: 204 ILLGYAAQ--DPDNLKVVGPPFTTEKYGIGVKKGDTALRTFLNDTLT 248 >gi|153853350|ref|ZP_01994759.1| hypothetical protein DORLON_00748 [Dorea longicatena DSM 13814] gi|149754136|gb|EDM64067.1| hypothetical protein DORLON_00748 [Dorea longicatena DSM 13814] Length = 285 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 51/297 (17%), Positives = 96/297 (32%), Gaps = 27/297 (9%) Query: 1 MYKDF---FVSILCLIILFFTSFSTNASILGDIKKR----------GFLKCGINTGLVGF 47 M K V+ + + S ++ + KK L G + + Sbjct: 1 MKKRLVLLLVTAMAATTVLAGCGSKDSGSSDNGKKSSKEAKIENDDDTLIVGFDASFPPY 60 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 +G++ GFD+D + + + K+ P++ + L S ID + Sbjct: 61 GYKDDSGEYVGFDLDLAQEVCDR---NNWKLVKQPIDWDSKDAELNSGTIDCIWNGFTMN 117 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA-DYFKA 166 + + + Q ++ GI + L G + VQ ++ L D Sbjct: 118 GRED---DYTWSDPYIDNKQVVVVRSDSGIDDFAGLKGKHVEVQTDSSALAALEGDQKDL 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + CDA DI + P ++ IL IS Sbjct: 175 AATFADLNQVAEYNTAFMDLESGACDAIAMDIGVANYQVNSRKNPDDYKILDKEISSEQY 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSS 283 A +G+TE + V T M AE+ ++++++ + V L I K+ Sbjct: 235 AVGFKKGNTELKDKVQKTLDEM--AED-----GTVDKIAEKYADYGVPGALCIGKNG 284 >gi|220929057|ref|YP_002505966.1| extracellular solute-binding protein family 3 [Clostridium cellulolyticum H10] gi|219999385|gb|ACL75986.1| extracellular solute-binding protein family 3 [Clostridium cellulolyticum H10] Length = 290 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 97/253 (38%), Gaps = 11/253 (4%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F ++ ++L SIL + +RG + G + + NG+W Sbjct: 1 MKKSIVCFIFLVIISVLLTACGTEKQESILDKVLERGVVNIGSGNNVPPMNYIDENGNWT 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD++ A++ + ++ +N K R L + +D++ N T R+ + Sbjct: 61 GFDIELSDAIAERLGVKLERVV---VNNKTRISFLANGTVDMVVSNLSHTRSRDE--QID 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA-HNMKYHPIVF 176 + Y KK +++ L+G I V G+ + + + + K F Sbjct: 116 YVEPPYLWTGKIAYAKKGKFKNLTDLAGKKIAVDQGSNAYIAIQQEIEKVNGAKPDIQTF 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + E A + + DA+T D + + E+ + I S + D++ Sbjct: 176 QSNAECFLALKQGKVDAFTQDSVIIAGVA--GKEGVEYEPIGGIYSPGLYGIGVPPNDSK 233 Query: 237 WYNIVSWTHYAMV 249 W + +S+ ++ Sbjct: 234 WKDKISFILQDLM 246 >gi|163853360|ref|YP_001641403.1| extracellular solute-binding protein [Methylobacterium extorquens PA1] gi|163664965|gb|ABY32332.1| extracellular solute-binding protein family 3 [Methylobacterium extorquens PA1] Length = 303 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 86/235 (36%), Gaps = 7/235 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDPSKIQ 79 + L +K G + G V F+ + N G+ + C ++ A + D +++ Sbjct: 27 SGTLKKVKDTGAITIGYRDASVPFSYLDGNQKPVGYAFEICLKVADAVKAHLKLDTLEVR 86 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 P+ + R + + ID+ +T R+ F + F+ + KG+ Sbjct: 87 LNPVTSATRIPLIANGTIDLECGSTTNNADRQRQAA--FTNTHFLTATRFVAKRDKGLDK 144 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ +GTT + + A + + + E R DA+ D Sbjct: 145 TDDLKGRTVVSTSGTTNIRQINEINTARGLGMRILPAKDHAEAFLMVETGRADAFVTDDV 204 Query: 200 ALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L AL + P + I + S+ P + + D + +V A+ + E Sbjct: 205 LLAALVAGSKTPDAYAISSEAQSRPEPYGIMLRKDDPAFKAVVDAATAALYKSPE 259 >gi|299069550|emb|CBJ40822.1| putative substrate-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum CMR15] Length = 298 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 89/238 (37%), Gaps = 6/238 (2%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSK 77 ++ L IK G ++ V F+ + ANG G+ +D C L AI D+ K Sbjct: 24 ASSPTLDRIKATGAIRLAHRESSVPFSYLDANGKPIGYSMDLCMRLVDAIRDNLKRPDLK 83 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +QYL + R A+ S + D+ +T RE +AF Y ++ GI Sbjct: 84 VQYLQVTPATRMDAIASGKADLECAST--NNARERREKVAFTIPHYIANGRMLVKTASGI 141 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + L G ++ G+ + +A + + E A + A+ D Sbjct: 142 HQMEDLRGKTVVSTRGSANGNLVRQLSEAGGLGITVVETADHSESFAMLADGKAQAFAMD 201 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L +K P+++ I+ P A + + D E+ ++ ++ E Sbjct: 202 DVLLAGMKANAKNPADYAIVGKTQQVVPYAIMLSKNDPEFKKLIDAAMSRIMEDGEAE 259 >gi|325697573|gb|EGD39458.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK160] Length = 291 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 101/262 (38%), Gaps = 30/262 (11%) Query: 1 MY--KDFFVSILCLIILFFTSFSTN-----------------ASILGDIKKRGFLKCGIN 41 M K F + F + T+ A L +IKK G L+ + Sbjct: 1 MKLSKTIFALTTLTLAFFLVACGTSSKKDAGNKDAASSKTVKARSLEEIKKSGKLRIAVF 60 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 + F V NG ++G+D+ L+ + P Y+P++A R L S ++DI Sbjct: 61 SDKKPFGYVDNNGKYQGYDIYLGDQLAKDLGVKPE---YVPVDAANRAEYLISNKVDITL 117 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 N T R+ + F G + K I+ QL G ++ + GTT E Sbjct: 118 ANFTVTDERKK--QVDFALPYMKVSLGVVSPKGSVITKPEQLEGKTLIITKGTTAETY-- 173 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 F+ + +++ + A R DA++ D + + A + V + + Sbjct: 174 --FEKNYPNIKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLG 229 Query: 222 SKSPLAPAIIQGDTEWYNIVSW 243 +APA+ +G+TE N ++ Sbjct: 230 DPDTIAPAVQKGNTELLNYIND 251 >gi|83719983|ref|YP_443031.1| amino acid ABC transporter periplasmic amino acid-binding protein [Burkholderia thailandensis E264] gi|167582027|ref|ZP_02374901.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis TXDOH] gi|167620192|ref|ZP_02388823.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis Bt4] gi|257139260|ref|ZP_05587522.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis E264] gi|83653808|gb|ABC37871.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis E264] Length = 264 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 86/252 (34%), Gaps = 19/252 (7%) Query: 1 MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K V+ L + F + + A +L ++K+RG L+ G+ F G+ Sbjct: 1 MKIASLKKLLVAGL-IGASFVAATAHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGEL 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD +A+++ + P ++ LQ+ + D++ T R+ L Sbjct: 60 VGFDVDIAKAIAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDQRK--QTL 114 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F P + I K S+ L G + V GT Sbjct: 115 DFSPAYTYSSAQLIQRKDDARQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVK 169 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E A R DA D L L + P ++ S +P +G+ Sbjct: 170 TYPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFRKGN 227 Query: 235 TEWYNIVSWTHY 246 ++ ++ Sbjct: 228 PKFAKAIADAMT 239 >gi|188583627|ref|YP_001927072.1| extracellular solute-binding protein family 3 [Methylobacterium populi BJ001] gi|179347125|gb|ACB82537.1| extracellular solute-binding protein family 3 [Methylobacterium populi BJ001] Length = 303 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 88/235 (37%), Gaps = 7/235 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQ 79 + L +K G + G V F+ + N G+ + C ++ A+ D +++ Sbjct: 27 SGTLKKVKDTGAITIGYRDASVPFSYLDGNQKPVGYAFEICLQVADAVKAHLKRDTLEVR 86 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 P+ + R + + ID+ +T R+ F + F+ ++KG+ Sbjct: 87 LNPVTSATRIPLIANGTIDLECGSTTNNADRQRQAA--FTNTHFLTATRFVAKREKGLDK 144 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ +GTT + + A + + + E R DA+ D Sbjct: 145 TDDLKGRTVVSTSGTTNIRQINEINTARGLGMRILPAKDHAEAFLMVETGRADAFVMDDV 204 Query: 200 ALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L AL ++ P + I + S+ P + + D + +V A+ + E Sbjct: 205 LLAALVASSKTPDAYAISSEAQSRPEPYGIMLRKDDPAFKAVVDAATAALYRSPE 259 >gi|312959230|ref|ZP_07773748.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] gi|311286490|gb|EFQ65053.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] Length = 331 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 87/245 (35%), Gaps = 11/245 (4%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDD---- 74 + L I G + + F+ + +G G+ D A+ + D Sbjct: 46 AAELTGTLKKINDSGTITLAHRDSSIPFSYIADGSGKPVGYSHDIQVAVVDQLKKDLNKP 105 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K++Y + ++ R +Q+ D+ +T R + + F + G ++ K Sbjct: 106 DLKVKYNLVTSQTRIPLIQNGTADLECGSTTNNAER--AQQVDFTTNIFEIGTRLLVKKD 163 Query: 135 ----KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + + L G ++ AGTT+E + M + I + E + R Sbjct: 164 KDGKPSYADFADLKGKNVVTTAGTTSERIIKAMNADKQMGMNVISAKDHGESFQMLESGR 223 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A+ D + L + +P + VI S A + +GD ++ V A+ Sbjct: 224 AVAFMMDDALLAGEEAKAKKPDDWVITGTPQSFEAYACMVRKGDPDFKKAVDDAIVALYK 283 Query: 251 AEELG 255 + E+ Sbjct: 284 SGEIN 288 >gi|168492230|ref|ZP_02716373.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae CDC0288-04] gi|183573551|gb|EDT94079.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae CDC0288-04] Length = 288 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 27/259 (10%) Query: 1 MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44 M K + L F + + A + +IKK G L+ + Sbjct: 1 MKLFKPLLTVLALAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V +G ++G+D++ L+ + ++Y+ ++A R L S ++DI N Sbjct: 61 KPFGYVDNDGSYQGYDIELGNQLAQNLGVK---VKYISVDAANRAEYLISNKVDITLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + K I+ V QL G ++ V GTT E F Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + ++ + +++ + A R DA++ D + + A + V + + Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229 Query: 225 PLAPAIIQGDTEWYNIVSW 243 +A A+ +G+ E + ++ Sbjct: 230 TIAAAVQKGNQELLDFINK 248 >gi|150403151|ref|YP_001330445.1| extracellular solute-binding protein [Methanococcus maripaludis C7] gi|150034181|gb|ABR66294.1| extracellular solute-binding protein family 3 [Methanococcus maripaludis C7] Length = 260 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 90/246 (36%), Gaps = 11/246 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGD-IKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K + ++ ++ F AS K G L G + F E A+G+ GFD Sbjct: 5 KKLILLGLVVSLVAFSGCTEDQASAESSMTMKEGILVVGTDPTFPPFEEKNADGELVGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + +IQ++ AL++++ D + T R + F Sbjct: 65 IDLMKALGEKMG---LEIQFVEQPFDGIIPALKAEKFDCIISAVTITDDRAKEVA--FTN 119 Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ + + SV L+G + Q GTT E Y + +E + Sbjct: 120 SYFDAAQVIAVLVDDESVQSVDDLAGKVVAAQLGTTGEYEAQHYAEELGF--EIKSYEVM 177 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D A + + +P + ++ + ++ A + E + Sbjct: 178 ADAFIDMENGRVDAVVTDD--GVAQRFLDTKPGFYKVVGEPMTAESYGLAANLDNQELID 235 Query: 240 IVSWTH 245 ++ Sbjct: 236 ALNAAL 241 >gi|148546355|ref|YP_001266457.1| extracellular solute-binding protein [Pseudomonas putida F1] gi|148510413|gb|ABQ77273.1| extracellular solute-binding protein, family 3 [Pseudomonas putida F1] Length = 305 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 86/237 (36%), Gaps = 8/237 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81 L IK+ G + G + F+ + + G+ D A+ A+ K++Y Sbjct: 28 GTLKKIKESGTITLGHRDSSIPFSYLAGKPEPVGYSHDIQLAVVDALKKQLGTDIKVRYN 87 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GIS 138 + ++ R +Q+ +D+ +T + R+ +G F + G + K Sbjct: 88 LVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVG--FSVGIFEVGTRLLTKVKDGQPAYK 145 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGTT+E L MK + I + E + R A+ D Sbjct: 146 DFPDLAGKNVVTTAGTTSERILKAMNADKQMKMNVISAKDHGEAFNMLESGRAVAFMMDD 205 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L +P++ VI S + + D + V A + E+ Sbjct: 206 ALLAGEMAKARKPADWVITGTPQSYEIYGCMVRKEDAAFKKAVDDAIVAYFKSGEVN 262 >gi|325693724|gb|EGD35643.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK150] Length = 312 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 101/262 (38%), Gaps = 30/262 (11%) Query: 1 MY--KDFFVSILCLIILFFTSFSTN-----------------ASILGDIKKRGFLKCGIN 41 M K F + F + T+ A L +IKK G L+ + Sbjct: 22 MKLSKTIFALTTLTLAFFLVACGTSSKKDAGNKDAASSKTVKARSLEEIKKSGKLRIAVF 81 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 + F V NG ++G+D+ L+ + P Y+P++A R L S ++DI Sbjct: 82 SDKKPFGYVDNNGKYQGYDIYLGDQLAKDLGVKPE---YVPVDAANRAEYLISNKVDITL 138 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 N T R+ + F G + K I+ QL G ++ + GTT E Sbjct: 139 ANFTVTDERKK--QVDFALPYMKVSLGVVSPKGSVITKPEQLEGKTLIITKGTTAETY-- 194 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 F+ + +++ + A R DA++ D + + A + V + + Sbjct: 195 --FEKNYPNIKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLG 250 Query: 222 SKSPLAPAIIQGDTEWYNIVSW 243 +APA+ +G+TE N ++ Sbjct: 251 DPDTIAPAVQKGNTELLNYIND 272 >gi|330820727|ref|YP_004349589.1| extracellular solute-binding protein [Burkholderia gladioli BSR3] gi|327372722|gb|AEA64077.1| extracellular solute-binding protein [Burkholderia gladioli BSR3] Length = 273 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 91/251 (36%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWK 57 M K + L +A L DIK+ G L+ F V + Sbjct: 1 MKKTLLAATLAALTGFAALAPSLAHADRLDDIKQAGVLRVATFDSNPPFGYVDPASNHIV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DVD+ RAL+ + ++ N R L S+++D++ N T R + Sbjct: 61 GLDVDYARALADKLGVK---LELQSTNPANRIPFLTSRKVDLVLANFTITDERAK--QVD 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + GQ F+ K + S QL G I GTT E+ + + F + ++ Sbjct: 116 FSIPYFSSGQQFLAKKG-VLKSKDQLDGLRIGADKGTTNEIAVREQFPKA----TVVAYD 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 AA RA A T D L L ++ I P I+ + I +G+ Sbjct: 171 DTPFAFAALRAGNVQAITQDGPKLVGLLANVPDKQKYEIPPFTITNDYMGVGIPKGEPRL 230 Query: 238 YNIVSWTHYAM 248 V+ T + Sbjct: 231 VAFVNDTLKGL 241 >gi|116873171|ref|YP_849952.1| amino acid ABC transporter, amino acid-binding protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742049|emb|CAK21173.1| amino acid ABC transporter, amino acid-binding protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 271 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 88/250 (35%), Gaps = 11/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S + S IKK + G++ V + + Sbjct: 1 MKKGLLITVMVVVMLALGACSGSESKEDQWNRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + ++ P++ + L++ ID++ T R+ + Sbjct: 61 GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHPI 174 F + Q + K I+ S + ++ Q G ++ +A + P Sbjct: 116 FSKPYMKNEQVLVTLKSSKINKFSDMKDKTLGAQNGASSIDDMAKKPEVLTDIISNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + A + + D Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDPTDFAVGMRKSD 235 Query: 235 TEWYNIVSWT 244 E ++ Sbjct: 236 KELQTKINKA 245 >gi|77459314|ref|YP_348821.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77383317|gb|ABA74830.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 282 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 95/248 (38%), Gaps = 4/248 (1%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V +L S L + RG L G + + A+G +GFD+D R Sbjct: 12 VFVLAASSAVMGIAQAADSKLDSVLARGKLIVGTGSTNAPWHFQGADGKLQGFDIDIARM 71 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ +F+DPSK++++ ++ R L + ++D+ + T R + +AF Y +G Sbjct: 72 VAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDMSCQFITVTASR--AQQVAFTLPYYREG 129 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 G ++ + L V + + K ++ V+ + A Sbjct: 130 VGLLLPNNSKYKEIEDLQAGGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAV 189 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + R DA D S+ L P + S A A+ +GD +W N V+ + Sbjct: 190 NSGRADAAATDQSS--VKYLMVQNPGRYRSPTYAWSPQTYACAVKRGDQDWLNFVNTALH 247 Query: 247 AMVTAEEL 254 +T E Sbjct: 248 EAMTGVEF 255 >gi|326317500|ref|YP_004235172.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374336|gb|ADX46605.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 298 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 90/242 (37%), Gaps = 6/242 (2%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFD 73 AS L IK G + G GF+ G G+ +D C A+ + + Sbjct: 21 APAQEAASTLHKIKDSGAITLGHRESSFGFSYNAGTGTPVGYSIDICMRIVDAIKAELQL 80 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 I+Y + ++ R + +DI +T + R+ + F P + ++ Sbjct: 81 PKLDIRYQLVTSQNRIPLVAGGTVDIECGSTTNLVERQKLVA--FSPDIFRYNVRMLVRA 138 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 GI S++ L G ++ +GTT+ L + K N+ + + + + R A Sbjct: 139 DSGIRSIADLQGKTVVATSGTTSLRLLREADKGRNLDIQQMAGKDHADSFLLVESGRAQA 198 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D L L T P + +I + + + + D + +V M+ + E Sbjct: 199 FVLDDILLAGLVATARNPKDFLITGEPLRTENQSLMFRKDDPAFKALVDRVVTGMMQSGE 258 Query: 254 LG 255 + Sbjct: 259 ME 260 >gi|152979602|ref|YP_001345231.1| extracellular solute-binding protein [Actinobacillus succinogenes 130Z] gi|150841325|gb|ABR75296.1| extracellular solute-binding protein family 3 [Actinobacillus succinogenes 130Z] Length = 288 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 8/222 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + S + IK+ ++ G+ + F V +G +GFDV+ +AL+ + D +K+++ Sbjct: 37 AAKTSAVERIKQADKIRIGVFSDKPPFGYVDKDGKNQGFDVEIAKALTKDLLGDENKVEF 96 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + A R L S +IDI N T R+ + F G + I+ V Sbjct: 97 VLVEAANRAEYLLSNKIDITLANFTVTPARQEVVA--FAEPYMKVALGVVSKDGAVITDV 154 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 QL G ++ V GTT + + F + + FE+ E A R R DA D + Sbjct: 155 KQLEGKTLLVNKGTTADAYFSKNFP----QIKLLKFEQNTETFEALRDGRGDALAHDNAL 210 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 L+A + P V + ++ +A A+ + D + ++ Sbjct: 211 LFAWA--KENPGFTVGVKELGDLDFIAGAVRKEDKDLLEWLN 250 >gi|116617694|ref|YP_818065.1| amino acid ABC transporter periplasmic protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096541|gb|ABJ61692.1| amino acid ABC transporter substrate-binding protein, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 284 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 91/268 (33%), Gaps = 27/268 (10%) Query: 1 MYKD---------FFVSILCLIILFFTSFSTNA----------SILGDIKKRGFLKCGIN 41 M K F++++ + L ++ S + IK+ + G++ Sbjct: 4 MKKKIVVNSIVGILFIALVVMAALSLSNNSQKSKSTEQTVVKTDQWSRIKREKQITIGLD 63 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 V +G GFDVD A+ ++ K+++ P++ + L + ID + Sbjct: 64 DTFVPMGFRDKSGKLVGFDVDLATAVFKSLG---IKVKWQPIDWSMKETELNTGNIDAIW 120 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 T R+ +AF + Q + KK I+ S + + Q ++ + T A Sbjct: 121 NGYTITDDRKK--KVAFSTPYHKATQVLVTLKKSNINKFSDMQDKVLGDQTASSGDQTFA 178 Query: 162 DY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 Y K + I ++ ++ A R D D P+++ I Sbjct: 179 QYPKVLKQYVKDQKVIGYDTFDKAFNDLNASRIDGLLIDEDYARYYVAHQSNPNDYTITT 238 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + A + D + V+ Sbjct: 239 GGFPVNDNAVGFRKADKKLRQAVNKELK 266 >gi|325689405|gb|EGD31410.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK115] Length = 291 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 100/262 (38%), Gaps = 30/262 (11%) Query: 1 MY--KDFFVSILCLIILFFTSF------------STNASI-----LGDIKKRGFLKCGIN 41 M K F + F + + ++ L +IKK G L+ + Sbjct: 1 MKLSKTIFALTTLTLAFFLVACGNSSKKDAGNKDAASSKTVKARSLEEIKKSGKLRIAVF 60 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 + F V G ++G+D+ L+ + P Y+P++A R L S ++DI Sbjct: 61 SDKKPFGYVDNKGKYQGYDIYLGDQLAKDLGVKPE---YVPVDAANRAEYLISNKVDITL 117 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 N T R+ + F G + K I+ QL G ++ + GTT E Sbjct: 118 ANFTVTDERKK--QVDFALPYMKVSLGVVSPKGSVITKPEQLEGKTLIITKGTTAETY-- 173 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 F+ + +++ + A R DA++ D + + A + V + + Sbjct: 174 --FEKNYPNIKLQKYDQYSDAYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLG 229 Query: 222 SKSPLAPAIIQGDTEWYNIVSW 243 +APA+ +G+TE N ++ Sbjct: 230 DPDTIAPAVQKGNTELLNYIND 251 >gi|323479996|gb|ADX79435.1| bacterial extracellular solute-binding protein [Enterococcus faecalis 62] Length = 276 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 89/252 (35%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 1 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R Sbjct: 61 IVGFDVDLAKAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + F + Q + K+K I++ S + G + VQ G++ D K Sbjct: 116 VQFTQPYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDILKKFVKDQT 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 176 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 235 Query: 233 GDTEWYNIVSWT 244 D + ++ Sbjct: 236 SDNQLVQKINTA 247 >gi|229546659|ref|ZP_04435384.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX1322] gi|256854335|ref|ZP_05559699.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|307276214|ref|ZP_07557344.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX2134] gi|307296172|ref|ZP_07576002.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0411] gi|229308226|gb|EEN74213.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX1322] gi|256709895|gb|EEU24939.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|306496146|gb|EFM65726.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0411] gi|306507126|gb|EFM76266.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX2134] gi|315030505|gb|EFT42437.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX4000] Length = 277 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 89/252 (35%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 2 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R Sbjct: 62 IVGFDVDLAKAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 116 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + F + Q + K+K I++ S + G + VQ G++ D K Sbjct: 117 VQFTQPYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDILKKFVKDQT 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236 Query: 233 GDTEWYNIVSWT 244 D + ++ Sbjct: 237 SDNQLVQKINTA 248 >gi|170720286|ref|YP_001747974.1| extracellular solute-binding protein [Pseudomonas putida W619] gi|169758289|gb|ACA71605.1| extracellular solute-binding protein family 3 [Pseudomonas putida W619] Length = 305 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 85/237 (35%), Gaps = 8/237 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81 L IK+ G + G + F+ + + G+ D A+ A+ K++Y Sbjct: 28 GTLKKIKESGTITLGHRDSSIPFSYLAGKPEPVGYSHDIQLAVVEALKKQLGTDIKVRYN 87 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GIS 138 + ++ R +Q+ +D+ +T + R +AF + G + K Sbjct: 88 LVTSQTRIPLVQNGTVDLECGSTTNNVER--QQQVAFSVGIFEVGTRLLTKVKDGQPSYK 145 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L G ++ AGTT+E L MK + I + E + R A+ D Sbjct: 146 DFTDLGGKNVVTTAGTTSERILKAMNADKQMKMNVISAKDHGEAFNMLESGRAVAFMMDD 205 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L +P++ VI S + +GD + V + E+ Sbjct: 206 ALLAGEMAKARKPADWVITGTPQSYEIYGCMMRKGDDTFKKAVDDAIVGYFKSGEVN 262 >gi|218532217|ref|YP_002423033.1| extracellular solute-binding protein family 3 [Methylobacterium chloromethanicum CM4] gi|218524520|gb|ACK85105.1| extracellular solute-binding protein family 3 [Methylobacterium chloromethanicum CM4] Length = 303 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 85/235 (36%), Gaps = 7/235 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDPSKIQ 79 + L +K + G V F+ + N G+ + C ++ A + D +++ Sbjct: 27 SGTLKKVKDTDTITIGYRDASVPFSYLDGNQKPVGYAFEICLKVADAVKAHLKLDTLEVR 86 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 P+ + R + + ID+ +T R+ F + F+ + KG+ Sbjct: 87 LNPVTSATRIPLIANGTIDLECGSTTNNADRQRQAA--FTNTHFLTATRFVAKRDKGLDK 144 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ +GTT + + A + + + E R DA+ D Sbjct: 145 TDDLKGRTVVSTSGTTNIRQINEINTARGLGMRILPAKDHAEAFLMVETGRADAFVTDDV 204 Query: 200 ALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L AL + P + I + S+ P + + D + +V A+ + E Sbjct: 205 LLAALVAGSKTPDAYAISSEAQSRPEPYGIMLRKDDPAFKAVVDAATAALYKSPE 259 >gi|290968269|ref|ZP_06559812.1| putative histidine ABC transporter, periplasmic histidine-binding protein HisJ [Megasphaera genomosp. type_1 str. 28L] gi|290781751|gb|EFD94336.1| putative histidine ABC transporter, periplasmic histidine-binding protein HisJ [Megasphaera genomosp. type_1 str. 28L] Length = 266 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 33/249 (13%), Positives = 75/249 (30%), Gaps = 13/249 (5%) Query: 1 MYKD----FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K + ++ + + S I + G++ G Sbjct: 1 MKKRSINIWMTLVIVMCVAVLAGCGHKPSETTGIPD--KIIIGMDDNFPPMGFRDDQGQL 58 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D + S + +++ ++ + AL+S Q+D+L T R+ + Sbjct: 59 VGFDIDVAKEASKRLG---IPVEFQSIDWDSKEAALKSGQVDVLWNGLTITPERQKVIA- 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + Q ++ I SG I Q G+++ L + + Sbjct: 115 -FSKPYMKNDQLLVVRSDSPIHDKQDFSGKCIGTQEGSSSIDALNRHKDFQRSLKDVKKY 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 R D D + +P + ++ + + + + D Sbjct: 174 GDYVNAFMDLEVGRIDGVLVDS--VVGRYYMEKKPGKFKVVDKSLGEETFGIGMRKEDKP 231 Query: 237 WYNIVSWTH 245 + ++ Sbjct: 232 LQDKMNKVM 240 >gi|315151627|gb|EFT95643.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0012] Length = 277 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 89/252 (35%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 2 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R Sbjct: 62 IVGFDVDLAKAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 116 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + F + Q + K+K I++ S + G + VQ G++ D K Sbjct: 117 VQFTQPYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236 Query: 233 GDTEWYNIVSWT 244 D + ++ Sbjct: 237 SDNQLVQKINTA 248 >gi|256959933|ref|ZP_05564104.1| extracellular solute-binding protein [Enterococcus faecalis Merz96] gi|293383503|ref|ZP_06629414.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecalis R712] gi|293386671|ref|ZP_06631245.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecalis S613] gi|312907121|ref|ZP_07766114.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis DAPTO 512] gi|312979300|ref|ZP_07790998.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis DAPTO 516] gi|256950429|gb|EEU67061.1| extracellular solute-binding protein [Enterococcus faecalis Merz96] gi|291079137|gb|EFE16501.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecalis R712] gi|291083888|gb|EFE20851.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecalis S613] gi|310626898|gb|EFQ10181.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis DAPTO 512] gi|311287894|gb|EFQ66450.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis DAPTO 516] gi|315164604|gb|EFU08621.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX1302] gi|315172707|gb|EFU16724.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX1346] Length = 273 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 89/252 (35%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 2 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R Sbjct: 62 IVGFDVDLAKAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 116 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + F + Q + K+K I++ S + G + VQ G++ D K Sbjct: 117 VQFTQPYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236 Query: 233 GDTEWYNIVSWT 244 D + ++ Sbjct: 237 SDNQLVQKINTA 248 >gi|227554920|ref|ZP_03984967.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis HH22] gi|229548745|ref|ZP_04437470.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis ATCC 29200] gi|255971261|ref|ZP_05421847.1| extracellular solute-binding protein [Enterococcus faecalis T1] gi|255973881|ref|ZP_05424467.1| extracellular solute-binding protein [Enterococcus faecalis T2] gi|256617689|ref|ZP_05474535.1| extracellular solute-binding protein [Enterococcus faecalis ATCC 4200] gi|256761566|ref|ZP_05502146.1| extracellular solute-binding protein [Enterococcus faecalis T3] gi|256957331|ref|ZP_05561502.1| extracellular solute-binding protein [Enterococcus faecalis DS5] gi|256964363|ref|ZP_05568534.1| extracellular solute-binding protein [Enterococcus faecalis HIP11704] gi|257077673|ref|ZP_05572034.1| extracellular solute-binding protein [Enterococcus faecalis JH1] gi|257081061|ref|ZP_05575422.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol] gi|257086158|ref|ZP_05580519.1| extracellular solute-binding protein [Enterococcus faecalis D6] gi|257089231|ref|ZP_05583592.1| extracellular solute-binding protein [Enterococcus faecalis CH188] gi|257415372|ref|ZP_05592366.1| extracellular solute-binding protein [Enterococcus faecalis AR01/DG] gi|257418406|ref|ZP_05595400.1| extracellular solute-binding protein [Enterococcus faecalis T11] gi|307270137|ref|ZP_07551454.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX4248] gi|307271413|ref|ZP_07552687.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0855] gi|307284363|ref|ZP_07564528.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0860] gi|312901658|ref|ZP_07760928.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0470] gi|312905047|ref|ZP_07764172.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0635] gi|312951825|ref|ZP_07770716.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0102] gi|227175946|gb|EEI56918.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis HH22] gi|229306138|gb|EEN72134.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis ATCC 29200] gi|255962279|gb|EET94755.1| extracellular solute-binding protein [Enterococcus faecalis T1] gi|255966753|gb|EET97375.1| extracellular solute-binding protein [Enterococcus faecalis T2] gi|256597216|gb|EEU16392.1| extracellular solute-binding protein [Enterococcus faecalis ATCC 4200] gi|256682817|gb|EEU22512.1| extracellular solute-binding protein [Enterococcus faecalis T3] gi|256947827|gb|EEU64459.1| extracellular solute-binding protein [Enterococcus faecalis DS5] gi|256954859|gb|EEU71491.1| extracellular solute-binding protein [Enterococcus faecalis HIP11704] gi|256985703|gb|EEU73005.1| extracellular solute-binding protein [Enterococcus faecalis JH1] gi|256989091|gb|EEU76393.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol] gi|256994188|gb|EEU81490.1| extracellular solute-binding protein [Enterococcus faecalis D6] gi|256998043|gb|EEU84563.1| extracellular solute-binding protein [Enterococcus faecalis CH188] gi|257157200|gb|EEU87160.1| extracellular solute-binding protein [Enterococcus faecalis ARO1/DG] gi|257160234|gb|EEU90194.1| extracellular solute-binding protein [Enterococcus faecalis T11] gi|306503303|gb|EFM72555.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0860] gi|306511908|gb|EFM80904.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0855] gi|306513506|gb|EFM82121.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX4248] gi|310630228|gb|EFQ13511.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0102] gi|310631626|gb|EFQ14909.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0635] gi|311291269|gb|EFQ69825.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0470] gi|315027600|gb|EFT39532.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX2137] gi|315031303|gb|EFT43235.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0017] gi|315035307|gb|EFT47239.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0027] gi|315148310|gb|EFT92326.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX4244] gi|315154252|gb|EFT98268.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0031] gi|315154875|gb|EFT98891.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0043] gi|315166989|gb|EFU11006.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX1341] gi|315170862|gb|EFU14879.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX1342] gi|315573425|gb|EFU85616.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0309B] gi|315576573|gb|EFU88764.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0630] gi|315581343|gb|EFU93534.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0309A] gi|329577683|gb|EGG59111.1| ABC transporter, substrate-binding protein, family 3 [Enterococcus faecalis TX1467] Length = 277 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 89/252 (35%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 2 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R Sbjct: 62 IVGFDVDLAKAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 116 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + F + Q + K+K I++ S + G + VQ G++ D K Sbjct: 117 VQFTQPYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236 Query: 233 GDTEWYNIVSWT 244 D + ++ Sbjct: 237 SDNQLVQKINTA 248 >gi|29375393|ref|NP_814547.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecalis V583] gi|257421055|ref|ZP_05598045.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|294779830|ref|ZP_06745216.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis PC1.1] gi|29342853|gb|AAO80617.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecalis V583] gi|257162879|gb|EEU92839.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|294453104|gb|EFG21520.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis PC1.1] gi|295113981|emb|CBL32618.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Enterococcus sp. 7L76] Length = 276 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 89/252 (35%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 1 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R Sbjct: 61 IVGFDVDLAKAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + F + Q + K+K I++ S + G + VQ G++ D K Sbjct: 116 VQFTQPYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 176 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 235 Query: 233 GDTEWYNIVSWT 244 D + ++ Sbjct: 236 SDNQLVQKINTA 247 >gi|323525258|ref|YP_004227411.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323382260|gb|ADX54351.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 314 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 86/255 (33%), Gaps = 14/255 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVKANG 54 + +S + L +A L + K + G V F+ AN Sbjct: 13 RRGAISAFAVFGLVALHAPNDARAAEAELTGTLLKVSKERVITIGYRDASVPFSYYDANQ 72 Query: 55 DWKGFDVDFCRALSSAIFDDP----SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G+ +D + I + K++ +P+ ++ R LQ+ ID +T R Sbjct: 73 HPVGYSIDIANLIVERIKTEIKLPDLKVRTIPITSQNRISLLQNGTIDFECTSTTNNAER 132 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + ++F + G ++ K GI + L ++ V AGTT+E L +M Sbjct: 133 --AQQVSFSNTFFVIGTRLLVRTKSGIKDFADLKDKTVVVGAGTTSEKILRKMNVEKSMN 190 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 I + E R A D + L + P ++ I+ + + Sbjct: 191 MDVISAKDHTESFLMLSTGRAKAMMMDDALLAGERAKARNPEDYEIVGTPQTYESYGCML 250 Query: 231 IQGDTEWYNIVSWTH 245 + D ++ Sbjct: 251 RKNDAAMKAVMDAAI 265 >gi|149003314|ref|ZP_01828203.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP14-BS69] gi|147758497|gb|EDK65495.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP14-BS69] Length = 290 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 103/259 (39%), Gaps = 27/259 (10%) Query: 1 MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44 M K ++ L F + + A + +IKK G L+ + Sbjct: 1 MKLFKPLLTVLVLAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V +G ++G+D++ L+ + ++Y+ ++A R L S ++DI+ N Sbjct: 61 KLFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYISVDAANRAEYLISNKVDIILANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + K I+ V QL G ++ V GTT E F Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + ++ + +++ + A R DA++ D + + A + V + + Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229 Query: 225 PLAPAIIQGDTEWYNIVSW 243 +A A+ +G+ E + ++ Sbjct: 230 TIAAAVQKGNQELLDFINK 248 >gi|227514519|ref|ZP_03944568.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus fermentum ATCC 14931] gi|227087076|gb|EEI22388.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus fermentum ATCC 14931] Length = 285 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 90/259 (34%), Gaps = 18/259 (6%) Query: 1 MYKD---FFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M + F + +L + + + + I+KRG + G++ V + Sbjct: 1 MKRLKYLFVLVLLVIPAVLLSGCESVTQRAGTQDTWSRIEKRGKVIVGLDDSFVPMGFRE 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G G+D+D +A+ K+ + ++ + L++ ID++ T R Sbjct: 61 RDGKLVGYDIDLAKAVFKQYG---IKVDFQTIDWSMKETELKNGTIDLIWNGYSMTPERA 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + F + Q + K+ I++ + + G + VQ G+T L +Y K K Sbjct: 118 KQVA--FSRPYLLNRQVLVTKKRDHINNFNDMKGKVLGVQNGSTGMTDLDEYPKLLKDKI 175 Query: 172 H---PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLA 227 PI+++ A+R D + + + + A Sbjct: 176 KGKSPILYDTFPNAFIDLNANRIQGILMDEVYANYYIQHQANAKSYSTYISNKMGADYFA 235 Query: 228 PAIIQGDTEWYNIVSWTHY 246 + +GD V+ Sbjct: 236 VGMRKGDKTLKKKVNEGLK 254 >gi|184154981|ref|YP_001843321.1| glutamine ABC transporter substrate binding component [Lactobacillus fermentum IFO 3956] gi|260663376|ref|ZP_05864267.1| glutamine ABC transporter substrate binding component [Lactobacillus fermentum 28-3-CHN] gi|183226325|dbj|BAG26841.1| glutamine ABC transporter substrate binding component [Lactobacillus fermentum IFO 3956] gi|260552228|gb|EEX25280.1| glutamine ABC transporter substrate binding component [Lactobacillus fermentum 28-3-CHN] gi|299782993|gb|ADJ40991.1| Glutamine ABC transporter substrate binding component [Lactobacillus fermentum CECT 5716] Length = 285 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 18/259 (6%) Query: 1 MYKD---FFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M + F + +L + + + + I+KRG + G++ V + Sbjct: 1 MKRLKYLFVLVLLVIPAVLLSGCESVTQRAGTQDTWSRIEKRGKVIVGLDDSFVPMGFRE 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G G+D+D +A+ K+ + ++ + L++ ID++ T R Sbjct: 61 RDGKLVGYDIDLAKAVFKQYG---IKVDFQTIDWSMKETELKNGTIDLIWNGYSMTPERA 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + F + Q + KK I++ + + G + VQ G+T L +Y K K Sbjct: 118 KQVA--FSRPYLLNRQVLVTKKKDHINNFNDMKGKVLGVQNGSTGMTDLDEYPKLLKDKI 175 Query: 172 H---PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLA 227 PI+++ A+R D + + + + A Sbjct: 176 KGKSPILYDTFPNAFIDLNANRIQGILMDEVYANYYIQHQANAKSYSTYISNKMGADYFA 235 Query: 228 PAIIQGDTEWYNIVSWTHY 246 + +GD V+ Sbjct: 236 VGMRKGDKTLKKKVNEGLK 254 >gi|116695573|ref|YP_841149.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113530072|emb|CAJ96419.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia eutropha H16] Length = 312 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 90/240 (37%), Gaps = 8/240 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFD 73 ST + +L I++ G + G + F+ G G+ VD C + A + Sbjct: 36 ALASTQSPVLDKIRESGTIVLGYRESALPFSFADDKGQPAGYAVDLCLRAAEAARQQLGL 95 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 K++++PL + R A+ + +D+ +L R+ + F Y ++ Sbjct: 96 KDLKVRWMPLTPQNRIPAVVNGLVDLDCAPNTNSLERQKQVA--FSVSHYVSTVRMLVRA 153 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 GI S L G ++ AG+T + + + + + E + R A Sbjct: 154 DSGIRSFGDLRGKTVVTSAGSTGDRHVRRMKAQYGYHD--VYAKDHGESFLLLESGRAQA 211 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D L L+ PS++VI+ +S A + + D EW +V E Sbjct: 212 FVMDDVLLAGLRARAKDPSQYVIVGPALSVEQNALMLSKADPEWKRLVDQALANTFAGPE 271 >gi|322378591|ref|ZP_08053031.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter suis HS1] gi|322380679|ref|ZP_08054824.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter suis HS5] gi|321146889|gb|EFX41644.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter suis HS5] gi|321148999|gb|EFX43459.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Helicobacter suis HS1] Length = 278 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 17/247 (6%) Query: 4 DFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 FF L+ L S + S L IK+RG L+ G+ + F V + G ++GF Sbjct: 6 KFFGVFSALVALSLVGCSDHKSKAQEGLSAIKERGILRVGVFSDKPPFGFVDSKGQYQGF 65 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D KIQ++P+ A R L++ ++D++ N T RE + F Sbjct: 66 DVYIAKRMAKDLLGDAKKIQFIPVEAAARVEFLKANKVDVIMANFTKTREREAV--VDFA 123 Query: 120 PITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKY-HPIVF 176 G + K I SV+ L + V GTT AD++ + N Y H + + Sbjct: 124 KPYMKVALGVVS-KGGVIKSVADLKSKNQPLIVNKGTT-----ADFYFSRNYPYIHLLKY 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ E A + +R A D + L+A P V +P++ + +APA+ +GD Sbjct: 178 DQNTETFLALKNNRGIALAHDNTLLFAW--VKQNPEFKVGIPNLGEQDVIAPAVKKGDKA 235 Query: 237 WYNIVSW 243 + + Sbjct: 236 LLDWLDQ 242 >gi|188589766|ref|YP_001920425.1| amino acid ABC transporter, substrate-binding protein [Clostridium botulinum E3 str. Alaska E43] gi|188500047|gb|ACD53183.1| amino acid ABC transporter, substrate-binding protein [Clostridium botulinum E3 str. Alaska E43] Length = 268 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 87/251 (34%), Gaps = 10/251 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K VS + I + + +N + + G++ V +G+ GFDV Sbjct: 7 KKLLIVSCVATIGVNLVACKSNKQ--ESASSKNEIIIGMDDTFVPMGFKDGSGETVGFDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +A+ + +++ ++ + L + ID++ T R+ + F + Sbjct: 65 DLAKAVGEKLNKK---VKFQSIDWSMKESELNNGNIDLIWNGYSITDERKE--NVEFSKV 119 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD--YFKAHNMKYHPIVFERV 179 + Q I I+S + L A + Q ++ + + + + FE Sbjct: 120 YLNNRQVIITLADSKINSKNDLINAKVGAQNQSSAVDAIKADGDMMSKFDGGNVVTFETN 179 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A R DA D L ++ IL D A I +GDT + Sbjct: 180 NDALMDLEAGRIDAVVADE-ILAKYYTNERGKEKYKILNDDFGAEDYAVGIKKGDTSFVQ 238 Query: 240 IVSWTHYAMVT 250 + +++ Sbjct: 239 EFNNALNSVIE 249 >gi|268678766|ref|YP_003303197.1| extracellular solute-binding protein family 3 [Sulfurospirillum deleyianum DSM 6946] gi|268616797|gb|ACZ11162.1| extracellular solute-binding protein family 3 [Sulfurospirillum deleyianum DSM 6946] Length = 266 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 84/251 (33%), Gaps = 16/251 (6%) Query: 1 MYKDFFVSILCLIILFFTS---FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++L ++ L + S L I ++G L G+ G + F G+ Sbjct: 1 MKK-LLAALLVMLGLNAMADDINLWQKSTLNSILQKGELTVGLEPGYMPFEMKDKQGNVI 59 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD ++ A+ ++ +P L + + DI+ T R +L + Sbjct: 60 GFDVDIANEMAKAMGVK---LKLVPTAWDGIIAGLLTGKYDIIISGMTITQER--NLKIN 114 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIV 175 F GQ + KK S L + T E+ FK Sbjct: 115 FADPYISVGQTILAPKKHAGKKWSDLDKPEYTIVTKIGVTGEIATRKMFKKAK----IRT 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 FE + D D + V L D ++ PL A+ +GD Sbjct: 171 FETEADAAQEVLNGNADGLVYDKPYNAIFFA-EKGGDKLVHLSDELTYEPLGFAVRKGDP 229 Query: 236 EWYNIVSWTHY 246 ++ N ++ Sbjct: 230 DFLNWLNNFLN 240 >gi|315145195|gb|EFT89211.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX2141] gi|315161882|gb|EFU05899.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0645] Length = 277 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 88/252 (34%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 2 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R Sbjct: 62 IVGFDVDLAKAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 116 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + F + Q + K K I++ S + G + VQ G++ D K Sbjct: 117 VQFTQPYMTNDQVLVSLKVKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236 Query: 233 GDTEWYNIVSWT 244 D + ++ Sbjct: 237 SDNQLVQKINTA 248 >gi|300859857|ref|ZP_07105945.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TUSoD Ef11] gi|300850675|gb|EFK78424.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TUSoD Ef11] Length = 276 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 88/252 (34%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 1 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R Sbjct: 61 IVGFDVDLAKAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + F + Q + K K I++ S + G + VQ G++ D K Sbjct: 116 VQFTQPYMTNDQVLVSLKVKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 176 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 235 Query: 233 GDTEWYNIVSWT 244 D + ++ Sbjct: 236 SDNQLVQKINTA 247 >gi|224008546|ref|XP_002293232.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220971358|gb|EED89693.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 277 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 67/303 (22%), Positives = 120/303 (39%), Gaps = 41/303 (13%) Query: 27 LGDIKKRGFLKCGI-NTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L +++R L+CGI GF + +GF+VD C+A+++A + +P Sbjct: 1 LEALQERKVLRCGIHKYDSRGFISFNNETNTREGFEVDLCKAVAAASLGSNFSYELVPTT 60 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREIS-----LGLAFRPITYFDGQGF-----IMHKK 134 RF L S + D+L +T T R++ +G +F + G + + Sbjct: 61 GLTRFADLASGEFDVLVASTTHTFDRDVHESSTGMGFSFSTPYLYGGMTYNGVPEFVKCA 120 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 +S+V +G IC GTT T + F A N ++ + E +C+ Sbjct: 121 DELSAVGDCAGILICSILGTTWYETTKELFPASN----IVLTKEQGESFQNLINGKCNVI 176 Query: 195 TG---DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 G + + + P + +K PLA GD E+ +V W ++ A Sbjct: 177 QGEQYEAPEVVVRGFGYEGP--YGQGKTSFTKDPLAMVTRDGDPEFAALVEWVLQTLILA 234 Query: 252 EELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFD 311 E ++NI ++ DT + G+ + + +GNYGE++ Sbjct: 235 E-----KQNITMMAADTF---------AESVEFFGKDM------FQNALAAVGNYGEIYT 274 Query: 312 RNL 314 R+L Sbjct: 275 RHL 277 >gi|240140776|ref|YP_002965256.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Methylobacterium extorquens AM1] gi|240010753|gb|ACS41979.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Methylobacterium extorquens AM1] Length = 303 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 86/235 (36%), Gaps = 7/235 (2%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDPSKIQ 79 + L +K G + G V F+ + N G+ + C ++ A + D +++ Sbjct: 27 SGTLKKVKDTGAITIGYRDASVPFSYLDGNQKPVGYAFEICLKVADAVKAHLKLDTLEVR 86 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 P+ + R + + ID+ +T R+ F + F+ + KG+ Sbjct: 87 LNPVTSATRIPLIANGTIDLECGSTTNNADRQRQAA--FTNTHFLTATRFVAKRDKGLDK 144 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++ +GTT + + A + + + E R DA+ D Sbjct: 145 TDDLKGRTVVSTSGTTNIRQINEINTARGLGMRILPAKDHAEAFLMVETGRADAFVMDDV 204 Query: 200 ALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L AL + P + I + S+ P + + D + +V A+ + E Sbjct: 205 LLAALVAGSKTPDAYAISSEAQSRPEPYGIMLRKDDPAFKAVVDAATAALYKSPE 259 >gi|187929545|ref|YP_001900032.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|309781680|ref|ZP_07676413.1| glutamate/aspartate periplasmic-binding protein [Ralstonia sp. 5_7_47FAA] gi|187726435|gb|ACD27600.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] gi|308919321|gb|EFP64985.1| glutamate/aspartate periplasmic-binding protein [Ralstonia sp. 5_7_47FAA] Length = 307 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 85/245 (34%), Gaps = 7/245 (2%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---F 72 + + + L IK+ G + G + F+ G+ + + + + Sbjct: 26 STGAQAESNDTLAKIKQSGVISVGYRESSIPFSYQADANTITGYSQEISNMIVAGVEKAV 85 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +++ P+ ++ R LQ+ ID +T L R+ + F + G ++ Sbjct: 86 GKKLQVKLTPITSQNRISLLQNGTIDFECGSTTNNLERQKQVA--FSNNIFIYGMLMLVK 143 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERVEEIDAAYRAHR 190 K GI L G ++ AGTT + L K + I+ + + + R Sbjct: 144 KDSGIKDFPDLKGKTVVTTAGTTEDRILQKMNGEAKDADKMNLILAKDHGQAFLTLESGR 203 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A+ D LY + ++ V+ + A + + D + + ++ Sbjct: 204 AVAFVMDEPLLYGERTKAKNQADWVVTGTPLQTETYACMMRKDDPAFKKVADDVIADLMK 263 Query: 251 AEELG 255 + + Sbjct: 264 SGKAN 268 >gi|157164816|ref|YP_001466613.1| surface antigen, CjaA [Campylobacter concisus 13826] gi|112800727|gb|EAT98071.1| surface antigen, CjaA [Campylobacter concisus 13826] Length = 285 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 110/277 (39%), Gaps = 22/277 (7%) Query: 1 MYK-DFFVSILCLIILFF----------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49 M K FF+ L + + S + IK+RG+++ G+ + F Sbjct: 1 MRKFKFFLLALVATVFLTGCGDDKSADKAAASNQTDAIAKIKERGYVRIGVFSDKPPFGY 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V +G +G+D+ F + ++ + D SK+++ + A R L + ++DI N T Sbjct: 61 VDKDGKNQGYDIYFAKRIAKDLLGDESKVKFELVEAAGRVEVLTADKVDITLANFTKTPE 120 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R + + F G + + I SV +L ++ V GTT + +F + Sbjct: 121 R--AQVVDFALPYMKVSLGIVSPEGAVIKSVDELKDKTLIVNKGTTADA----FFTKNYP 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + +++ E AA R A D + L+A + P V + + +APA Sbjct: 175 DIKLLKYDQNTETFAALVDKRGAALAHDNALLFAWA--KETPGFVVGVEALGDVDVIAPA 232 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + +G+ ++ ++ + K+ + K Sbjct: 233 VKKGNKALLEWIN---NEIIELGKENFFHKDYDATLK 266 >gi|304415625|ref|ZP_07396229.1| polar amino acid ABC transporter periplasmic amino acid-binding subunit [Candidatus Regiella insecticola LSR1] gi|304282523|gb|EFL91082.1| polar amino acid ABC transporter periplasmic amino acid-binding subunit [Candidatus Regiella insecticola LSR1] Length = 275 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 62/328 (18%), Positives = 109/328 (33%), Gaps = 65/328 (19%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M L L S + N L IKK G ++ + F V + G+ Sbjct: 1 MKHFVIAITLFFTSLLIASCTPNTDKLDAIKKEGVIRIAVFDSNPPFGYVDSQTNKLVGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD AL++A+ ++ N R LQSK++D+++ N T R + F Sbjct: 61 DVDIANALANALGVK---LELRATNPANRIALLQSKKVDLIAANFTITDERAK--EVDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + ++ I GT E+TL +++ I ++ Sbjct: 116 VPYFATGQKFIARKG-VLKTAEDINNLRIGADKGTVQEITLREHYPTAK----VISYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237 A R A T D S L L ++ I P I+K A+ +G+ Sbjct: 171 PLAFVALRNGNVQAITQDDSKLIGLLGNISNEQKADFEISPFSITKEYQGVAVAKGEKRL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 + ++ + +++ + + Sbjct: 231 IDAINVA-------------------------------LIKLEQEGDAAK---------- 249 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRG 325 ++ R G +S +PRG Sbjct: 250 -----------IYHRWFGPESTAPLPRG 266 >gi|104773644|ref|YP_618624.1| glutamine ABC transporter, glutamine-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422725|emb|CAI97352.1| Glutamine ABC transporter, glutamine-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 281 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 98/257 (38%), Gaps = 17/257 (6%) Query: 1 MYKDF--FVSILCLIILFF----TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-AN 53 M + +I+ +++L S S ++S +K+ + G+ F+ + + Sbjct: 1 MARKLRELTAIMAVLLLSLVFTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDS 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+VD RA++ I K++ ++ K R + L+ +D + T R Sbjct: 61 GKATGFEVDLARAITKQILGPKGKMKIEYISEKSRIMDLKIGNVDAVMATMTNTPDRRKI 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKY 171 + F + G+ I+ KK ++S+ + + G+T + + Y Sbjct: 121 --INFSDTYFMAGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAPKA---- 174 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 I ++ A + + A D + L L + +LPD + P I Sbjct: 175 RVIFYDDYGSCYNALKTGKASAMVSDNAVLAGLISDDKDK--FKMLPDTFTVEPYGIGIK 232 Query: 232 QGDTEWYNIVSWTHYAM 248 +G+ ++ V+ + Sbjct: 233 RGEDKFTAEVNQALKVL 249 >gi|291287601|ref|YP_003504417.1| extracellular solute-binding protein family 3 [Denitrovibrio acetiphilus DSM 12809] gi|290884761|gb|ADD68461.1| extracellular solute-binding protein family 3 [Denitrovibrio acetiphilus DSM 12809] Length = 269 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 95/254 (37%), Gaps = 19/254 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + V L L + N S L I K G K G++ G + F G+ Sbjct: 1 MKRVLLVLCLMLTMAVSAVAKDNDDQPVSALDSIVKSGVFKVGLDPGYMPFEMRDKKGEL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D + ++ ++ ++ + AL + + D++ T LR +L + Sbjct: 61 IGFDIDLAKDMAKSMGVK---LEIVTTAWDGIIPALLTGKFDLIMGGMTVTQLR--NLRV 115 Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYH 172 F GQ I++KK + S L+ V A TT ++ ++ Y Sbjct: 116 NFADPYIVVGQTIIINKKVADKVKSYKDLNDPKYTVCAKLGTTGDIAISKYMPNAKH--- 172 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +E E R DA+ D+ + H L + + PLA A+ + Sbjct: 173 -RQYETEAEGMMEVVNGRVDAFVYDLPPNAIFASKHKERVVH--LEEPFTFEPLAFAVRR 229 Query: 233 GDTEWYNIVSWTHY 246 GD ++ N ++ Sbjct: 230 GDYDFVNWINNYLQ 243 >gi|257870690|ref|ZP_05650343.1| amino acid-binding protein Abp [Enterococcus gallinarum EG2] gi|257804854|gb|EEV33676.1| amino acid-binding protein Abp [Enterococcus gallinarum EG2] Length = 267 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 78/249 (31%), Gaps = 8/249 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L F + ++ + + G++ V GD GFD Sbjct: 1 MKKIGLTLLAGASLLLFAACGNSSEKAESAADKEEVIVGLDDTFVPMGFQDDQGDIVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A+ +K+++ ++ + L + ID++ T RE + F Sbjct: 61 VDLAKAVFDLTG---TKVKFQAIDWSMKETELDNGTIDMIWNGYTKTEAREK--KVLFSD 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFE 177 + Q + K I+S + + Q G++ T + K ++ Sbjct: 116 TYMENKQVLVTAKDSNITSFDAMKDKVLGAQEGSSGYDTFNNQPEVLKDIVADNEATLYA 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E R D D + ++ ++ A + + D Sbjct: 176 SFNEAFIDLENGRIDGLLIDRVYAEYYLTQTKKADDYNVIESPFKAENFAVGVRKDDQAL 235 Query: 238 YNIVSWTHY 246 + ++ Sbjct: 236 ADKINEGLK 244 >gi|241664891|ref|YP_002983251.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|240866918|gb|ACS64579.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 298 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 94/243 (38%), Gaps = 7/243 (2%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIF 72 + T + +L I+ G ++ V F+ V G G+ +D C AL A+ Sbjct: 20 ALALPTTSPVLDRIRDTGAVRLAYRENSVPFSYVDG-GKPVGYSIDLCSRLVEALKVAVK 78 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 IQY+P+ R A+ + D+ +T RE +AF Y ++ Sbjct: 79 RADLNIQYVPVTPATRIAAITEGKADLECGST--NNTRERREKVAFTIPHYIASSRMLVK 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 GI L+ ++ G+T + A +K + + E A + D Sbjct: 137 TSSGIHRWEDLNNKTVVSTRGSTNGGQIRAMADARVLKVNVVEARDHTEAFGLVVAGKAD 196 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A+ D LY + T+ P+++ ++ ++ +P A + + D E+ ++ M+ Sbjct: 197 AFAMDDVLLYGFRATSPNPADYTVVGSNLAVAPYAIMLSKDDPEFKKVIDLAMSRMILDG 256 Query: 253 ELG 255 E Sbjct: 257 EAE 259 >gi|26987807|ref|NP_743232.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas putida KT2440] gi|24982504|gb|AAN66696.1|AE016297_10 amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas putida KT2440] Length = 306 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 86/237 (36%), Gaps = 8/237 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81 L IK+ G + G + F+ + + G+ D A+ A+ K++Y Sbjct: 29 GTLKKIKESGTITLGHRDSSIPFSYLAGKPEPVGYSHDIQLAVVDALKKQLGTDIKVRYN 88 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GIS 138 + ++ R +Q+ +D+ +T + R+ +G F + G + K Sbjct: 89 LVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVG--FSVGIFEVGTRLLTKVKDGQPAYK 146 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGTT+E L MK + I + E + R A+ D Sbjct: 147 DFPDLAGKNVVTTAGTTSERILKAMNADKQMKMNVISAKDHGEAFNMLESGRAVAFMMDD 206 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L +P++ VI S + + D + V A + E+ Sbjct: 207 ALLAGEMAKARKPADWVITGTPQSYEIYGCMVRKDDAAFKKAVDDAIVAYFKSGEVN 263 >gi|222109926|ref|YP_002552190.1| family 3 extracellular solute-binding protein [Acidovorax ebreus TPSY] gi|221729370|gb|ACM32190.1| extracellular solute-binding protein family 3 [Acidovorax ebreus TPSY] Length = 266 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 34/250 (13%), Positives = 77/250 (30%), Gaps = 12/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKANGD 55 M K V++L L + + + G++ + Sbjct: 1 MKKFAAVALLTLGAVLVGCSKQEPAAPAAAPAPAPAAVTKIVVGLDDNFPPMGFRDEKNE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D + + + + +++ P++ + L K++D L T R+ Sbjct: 61 LVGFDIDMAKEAAKRLGVE---VEFKPIDWSAKEAELSGKRVDALWNGLTITEERK--QN 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + Q ++ I + + L+G + Q G++ + Sbjct: 116 ILFTAPYMENHQIIVVPAGSVIKAKADLAGKVVGAQEGSSAVDAIKKEEAVFKSFKELKT 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F R +A D + +P ++ +L D + + DT Sbjct: 176 FGDNVTALMDLTTGRLEAVVVDE--VVGRYYVAKKPDQYAVLDDNFGTEEYGVGVRKDDT 233 Query: 236 EWYNIVSWTH 245 E + + Sbjct: 234 ELHGKLDKAL 243 >gi|153952077|ref|YP_001398009.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Campylobacter jejuni subsp. doylei 269.97] gi|152939523|gb|ABS44264.1| amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. doylei 269.97] Length = 259 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 59/245 (24%), Positives = 97/245 (39%), Gaps = 10/245 (4%) Query: 2 YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K + + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 4 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + +D + T R+ F Sbjct: 64 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 121 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + + K + F Sbjct: 122 SEPYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R +A++ D S L ILPD + D + Sbjct: 182 YPSIKAALDAKRVNAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 236 Query: 239 NIVSW 243 V Sbjct: 237 KYVDD 241 >gi|32266980|ref|NP_861012.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Helicobacter hepaticus ATCC 51449] gi|32263032|gb|AAP78078.1| probable ABC-type amino-acid transporter periplasmic solute-binding protein [Helicobacter hepaticus ATCC 51449] Length = 260 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 97/242 (40%), Gaps = 8/242 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDV 61 K + L + NA +L DIKK+ L G+ + FA + KGF++ Sbjct: 8 KRLLKVAGLFLFLSMFALQANAGMLEDIKKKDELVVGVKNDIPHFALLDQKTKEIKGFEI 67 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L+ I + +K++ + +NAK R L + ID++ T R+ + F Sbjct: 68 DVAKLLAKHILGNENKLKLVAVNAKTRGPLLDNGSIDVVIATFTITPERKRT--YNFSEP 125 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y D G ++ K+KG S++ + A+I V T++ +A K + F Sbjct: 126 YYKDSVGLLVLKEKGYKSLADMKDATIGVAQAATSKRAIASAAKKLGINVKFNEFPDYPS 185 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 I AA A R DA++ D S L IL D + D E+ + Sbjct: 186 IKAALDAKRIDAFSVDKSILLGYVDKKS-----EILSDSFEPQEYGIVSPKKDKEFAAFI 240 Query: 242 SW 243 Sbjct: 241 DT 242 >gi|115360990|ref|YP_778127.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115286318|gb|ABI91793.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 313 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 54/245 (22%), Positives = 99/245 (40%), Gaps = 12/245 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75 + + L ++ G + G + F+ + A G+ ++ C+AL S+I + Sbjct: 38 APAQLTGTLAKVRSSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVSSIEDAVNKS 97 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 I+++P+ + R A+ S +D+ +T L R +AF PI + G ++ + Sbjct: 98 LTIRWVPVTSDNRIDAVVSGNVDLECGSTTSNLER--QQRVAFSPIIFVAGTKVMVKRGS 155 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L+ + V AGTT E L D + V + A + R DA+ Sbjct: 156 PIRSFRDLAAKKVAVTAGTTNEKALRDLDARFKLGIQLQVVPDHAQGFALVASGRADAFA 215 Query: 196 GDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D LY L + ++ ++ D +S P + D + +V T EEL Sbjct: 216 TDDVLLYGLIAENAGKGGQYDVVGDYLSYDPYGIMFRKDDPQLAQVVKSTF------EEL 269 Query: 255 GITQK 259 + + Sbjct: 270 AVDGE 274 >gi|12831456|gb|AAK08611.1| GtpB [Agrobacterium tumefaciens] Length = 289 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 86/247 (34%), Gaps = 10/247 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M ++ + L S +A L IK G ++ G+ F +G G Sbjct: 29 MISRTATALGTIAALMLASAPASAQTLPKAIKDAGIIRIGVKCDSPPFGASGTDGKPAGI 88 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D + + A F +K + + R +L +ID++ T RE + + Sbjct: 89 EIDIAKQIGIAAFGSANKAELSCVATDARIPSLTGGKIDLIIATLGKTPSRE--QVIDYS 146 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I Y+ I+ K+ + ++ L G S+ + G + L + I Sbjct: 147 NIYYWGSSRVIVPKESKVQKLADLDGKSMLIIKGGSQLKWLKERIP----TLEFIQLNTN 202 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A + R D Y GD + L + + L + + I +G+ E Sbjct: 203 ADNLQALQQGRADGYVGDAITIATLASSYP---QFRALEEPVDLGFNGVGIRKGEDELKA 259 Query: 240 IVSWTHY 246 V+ Sbjct: 260 FVNGVLK 266 >gi|315159959|gb|EFU03976.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0312] Length = 277 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 88/252 (34%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 2 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD A+ + + P++ + LQ++ ID++ T R Sbjct: 62 IVGFDVDLANAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 116 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + F + Q + K+K I++ S + G + VQ G++ D K Sbjct: 117 VQFTQPYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDILKKFVKDQT 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236 Query: 233 GDTEWYNIVSWT 244 D + ++ Sbjct: 237 SDNQLVQKINTA 248 >gi|89091825|ref|ZP_01164780.1| putative ABC transporter periplasmic amino acid-binding protein [Oceanospirillum sp. MED92] gi|89083560|gb|EAR62777.1| putative ABC transporter periplasmic amino acid-binding protein [Oceanospirillum sp. MED92] Length = 275 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 87/251 (34%), Gaps = 7/251 (2%) Query: 1 MYKDFFVSILC-LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M I I + +S + A L ++ KRG L CG+ + GF Sbjct: 1 MKLLKLAGIAASAIAVMASSVTAQADQLDEVIKRGTLNCGVVLDFPPMGYFDKDNKPAGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+C L++A+ + + L +R +L S + D++ +T TL R S+G F Sbjct: 61 DVDYCNDLAAALGVKSNVLN---LTWGDRIPSLVSGKTDVVIGSTSDTLERAKSVG--FT 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFER 178 + I K I+S + L + GTT E Y + K + F+ Sbjct: 116 YPYFVFKFQTISKKGTPINSFADLKNVKVGAALGTTYETEYLAYAEKMGWGKDNYTAFKS 175 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + DA + + T + + + + W Sbjct: 176 ENDAYLGLYQGKVDAIISTNTNIATKLQTKEFADYVAGPYVPNYDDVVGLIAKRSEVAWI 235 Query: 239 NIVSWTHYAMV 249 N ++ + Sbjct: 236 NYLNLFLIHQI 246 >gi|121534019|ref|ZP_01665845.1| extracellular solute-binding protein, family 3 [Thermosinus carboxydivorans Nor1] gi|121307530|gb|EAX48446.1| extracellular solute-binding protein, family 3 [Thermosinus carboxydivorans Nor1] Length = 254 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 77/216 (35%), Gaps = 7/216 (3%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 + + G++ + GFDVD + + + ++++ P++ + L Sbjct: 26 KKKIVVGLDDNFPPMGFRDDKNNIVGFDVDMAKEAAKRLG---MEVEFKPIDWNSKEAEL 82 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152 K++D+L T R+ ++ F + Q +++ I S + L+G + VQ Sbjct: 83 NGKRVDVLWNGLTITEKRKENIA--FTKPYMENRQIIVVNANSPIKSKADLAGKVVGVQD 140 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+++ + A + +A R DA D + +P Sbjct: 141 GSSSVEAVEKDAAALKSFKELKKYPDNVAALMDLKAGRLDAVVVDE--IVGRYYIAKKPG 198 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 E+ IL D + + D E + + M Sbjct: 199 EYAILADNFGSEEYGVGLRKDDKELLDKLQKVLDEM 234 >gi|91784493|ref|YP_559699.1| ABC glutamate/aspartate transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|91688447|gb|ABE31647.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 292 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 87/256 (33%), Gaps = 11/256 (4%) Query: 8 SILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 L + S +A L I G + G+ + F+ G G+ Sbjct: 1 MALAAFGAVSLAGSVHADELTGTLKKIHDDGVVVLGVREASIPFSYFDGKGT-VGYSQTI 59 Query: 64 C----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + + K+ + + + R L + QID+ +T T+ RE F Sbjct: 60 ALQIVDEIKKTLGMPQLKVHEITVTSSNRTPMLLNNQIDLECGSTTHTVERESVAA--FS 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I K GI+ L+G ++ AGT+ E L ++ Sbjct: 118 DSFFQYAVRMIARKSSGITDFQDLAGKTVVTTAGTSDERLLRRLNTDKHLNMRITSARDH 177 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + R A+ D +Y K T+ RP + V+ + A +GD + N Sbjct: 178 LEAFGAVKDDRAVAFVMDEPIVYGFKSTDPRPDDFVVTGTPLGYEVYACMFRKGDEPFRN 237 Query: 240 IVSWTHYAMVTAEELG 255 +V+ T+ E Sbjct: 238 LVNGVIARGQTSGEAE 253 >gi|121593167|ref|YP_985063.1| extracellular solute-binding protein [Acidovorax sp. JS42] gi|120605247|gb|ABM40987.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax sp. JS42] Length = 295 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 34/250 (13%), Positives = 77/250 (30%), Gaps = 12/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKANGD 55 M K V++L L + + + G++ + Sbjct: 30 MKKFAAVALLTLGAVLVGCSKQEPAAPAAAPAPAPAAVTKIVVGLDDNFPPMGFRDEKNE 89 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D + + + + +++ P++ + L K++D L T R+ Sbjct: 90 LVGFDIDMAKEAAKRLGVE---VEFKPIDWSAKEAELSGKRVDALWNGLTITEERK--QN 144 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + Q ++ I + + L+G + Q G++ + Sbjct: 145 ILFTAPYMENHQIIVVPAGSAIKAKADLAGKVVGAQEGSSAVDAIKKEEAVFKSFKELKT 204 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F R +A D + +P ++ +L D + + DT Sbjct: 205 FGDNVTALMDLTTGRLEAVVVDE--VVGRYYVAKKPDQYAVLDDNFGTEEYGVGVRKDDT 262 Query: 236 EWYNIVSWTH 245 E + + Sbjct: 263 ELHGKLDKAL 272 >gi|289168136|ref|YP_003446405.1| ABC transporter substrate binding lipoprotein-amino acid transport [Streptococcus mitis B6] gi|288907703|emb|CBJ22540.1| ABC transporter substrate binding lipoprotein-amino acid transport [Streptococcus mitis B6] Length = 279 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 94/254 (37%), Gaps = 13/254 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K + ++ L+ LF T+ + AS +++G + G + V + NG + Sbjct: 4 KKIALVLVSLLTLFLTACTQKASDPKQDNWDKYQEQGTITIGFDNTFVPMGFEEKNGQYT 63 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+S + K+Q+ P++ + LQ+ ID + T R +A Sbjct: 64 GFDIDLAQAVSEKLG---FKVQFQPIDWDMKETELQNGTIDAIWNGYSATDER--REKVA 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 F + Q + K + I SV + ++ QAG++ L D K H Sbjct: 119 FSIPYMENQQVLVTKKSQWIHSVEDMKDKTLGAQAGSSGYLDFEAQPDLLKNHVKDQKAN 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 ++ E + R DA D + +++ + A + D Sbjct: 179 QYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILNDYNVFSAGFESESFAVGVRPAD 238 Query: 235 TEWYNIVSWTHYAM 248 ++ A+ Sbjct: 239 KRLLQALNQAFIAL 252 >gi|325125286|gb|ADY84616.1| Glutamine ABC transporter solute-binding component [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 270 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 95/246 (38%), Gaps = 11/246 (4%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFC 64 +L ++ S S ++S +K+ + G+ F+ + +G GF+VD Sbjct: 1 MAVLLLSLVFTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDSGKATGFEVDLA 60 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RA++ I K++ ++ K R + L+ +D + T R + F + Sbjct: 61 RAITKQILGPKGKMKIEYISEKSRIMDLKIGNVDAVMATMTNTPDRRKI--INFSDTYFM 118 Query: 125 DGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G+ I+ KK ++S+ + + G+T + + Y I ++ Sbjct: 119 AGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAPK----DRVIFYDDYGSC 174 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A +A + +A D + L L + +LPD + P I +G+ ++ V+ Sbjct: 175 YNALKAGKANAMVSDNAVLAGLISDDKDK--FKMLPDTFTVEPYGIGIKKGEDKFTAEVN 232 Query: 243 WTHYAM 248 + Sbjct: 233 QALKVL 238 >gi|121602735|ref|YP_988960.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Bartonella bacilliformis KC583] gi|121602769|ref|YP_988990.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Bartonella bacilliformis KC583] gi|120614912|gb|ABM45513.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Bartonella bacilliformis KC583] gi|120614946|gb|ABM45547.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Bartonella bacilliformis KC583] Length = 302 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 61/259 (23%), Positives = 104/259 (40%), Gaps = 7/259 (2%) Query: 1 MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + V I II S + L IK+ G + G+ G A NG + GF Sbjct: 1 MRRSLSVLITTAIIGLIVSVAHAQNDTLERIKQTGRITLGVRESS-GLAYALGNGRYTGF 59 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 + + + I P +I+YLP+ ++ R LQ+ D +T R + Sbjct: 60 HTEMAENIINDISKKIGKPIRIRYLPITSQNRIPLLQNNTYDFECGSTTNDTARGR--SV 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 AF TY + + K GI S+ L+G +I GTT + +A N+ + I Sbjct: 118 AFAYTTYVEEVRIAVKKDSGIKSIQDLNGKTIATTTGTTAVQLIRQNGRAKNINFRVING 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R DA+ D S L + PS+++IL ++S P+A + D Sbjct: 178 RDHADSFLLLESGRADAFIMDSSILAGSISRSRNPSDYMILDAVLSVEPIACMLRLEDKN 237 Query: 237 WYNIVSWTHYAMVTAEELG 255 + ++ + + + L Sbjct: 238 FEQAINDSIVSQIKDGSLE 256 >gi|238753989|ref|ZP_04615348.1| Extracellular solute-binding protein, family 3 [Yersinia ruckeri ATCC 29473] gi|238707741|gb|EEQ00100.1| Extracellular solute-binding protein, family 3 [Yersinia ruckeri ATCC 29473] Length = 278 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 54/246 (21%), Positives = 90/246 (36%), Gaps = 13/246 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61 K +++ L L S A L DIK+ G ++ + F + + G+DV Sbjct: 2 KHHAIALTLLASLVTLSGQAQADKLDDIKQAGVVRIAVFDSNPPFGYIDEQSKKLVGYDV 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + ++ N R L SK++D+++ N T R + F Sbjct: 62 DVANAIAKDLGVK---LELKATNPANRIPLLASKKVDLIAANFTITDERAK--QVNFSLP 116 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + GQ FI K +++ + I GT E+TL D + I ++ Sbjct: 117 YFATGQKFIARKG-VLTTPEDIGKLRIGADKGTVQEITLRDRYPTAK----VISYDDTPL 171 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYN 239 A R A T D + L L + I P I+K I +G+ Sbjct: 172 AFTALRNGNVQAITQDDAKLVGLLGNVPAAQKADFEISPFSITKEYQGIGIPKGEDRLTA 231 Query: 240 IVSWTH 245 V+ T Sbjct: 232 AVNQTL 237 >gi|227517775|ref|ZP_03947824.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX0104] gi|227074772|gb|EEI12735.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX0104] Length = 277 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 90/252 (35%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G+ Sbjct: 2 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGN 61 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R Sbjct: 62 IVGFDVDLAKAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 116 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + F + Q + K+K I++ S + G + VQ G++ D K Sbjct: 117 VQFTQPYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236 Query: 233 GDTEWYNIVSWT 244 D + ++ Sbjct: 237 SDNQLVKKINTA 248 >gi|167570067|ref|ZP_02362941.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia oklahomensis C6786] Length = 264 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 82/247 (33%), Gaps = 16/247 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K ++ + T+ + +L ++K+RG L+ G+ F G+ GFDV Sbjct: 7 KKLLVTGLIGASFVAATAHAA--DLLDEVKQRGTLRIGLEGTFPPFNSKNPQGELVGFDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +A+++ + P ++ LQ+ + D++ T R L F P Sbjct: 65 DIAKAIAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDKR--RETLDFSPA 119 Query: 122 TYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F I K S+ L G + V GT + Sbjct: 120 YTFSSAQLIQRKDDTRQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKTYPGA 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A R DA D L L + P ++ S +P +G+ ++ Sbjct: 175 PEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGSNVGSANPSGIPFKKGNPKFAK 232 Query: 240 IVSWTHY 246 ++ Sbjct: 233 AIAEAMT 239 >gi|317405100|gb|EFV85446.1| solute-binding protein [Achromobacter xylosoxidans C54] Length = 273 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 99/276 (35%), Gaps = 13/276 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59 M + + + A + DIK RG L CG F+ A G+ Sbjct: 1 MKRHSLIVACLGLAALSLGAGARADQVADIKARGELICGTLGTSQPFSFQDAATRQLVGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C+ ++ + + Y L+ R L ++DIL+ N + + +AF Sbjct: 61 DVDVCKLVADKLGVK---VSYKLLSVAARVPELNEGRVDILAANLG--YSPDRAEQIAFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y Q ++ K G+ ++ L+G + G+++E + I + Sbjct: 116 HAYYVSPQKLLVRKDSGLDTIESLNGRRVGATKGSSSEREIKRILDK----SQVIGYGDS 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A + + DA L L L + + ++ + P + + + Sbjct: 172 SATYLALQQKKVDAQFASELVLVRLVLQSPPTAPVSVIAKSVFDEPWGLGVRKSEPGMLA 231 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 +V+ A+ AE G+ + ++ T ++R Sbjct: 232 VVN---QALDEAESSGVAAQLFDKWFGAQTPYKLER 264 >gi|241662510|ref|YP_002980870.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|309781092|ref|ZP_07675830.1| ABC transporter [Ralstonia sp. 5_7_47FAA] gi|240864537|gb|ACS62198.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] gi|308920158|gb|EFP65817.1| ABC transporter [Ralstonia sp. 5_7_47FAA] Length = 303 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 93/237 (39%), Gaps = 6/237 (2%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-- 74 T +++ +L I+ G ++ V F+ A+ G+ +D C + + D Sbjct: 24 GTVQASSTPVLDRIRDTGAVRVAYRESSVPFSFYDADKKPIGYAMDLCLRVVDKLRTDLK 83 Query: 75 --PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 K+QY+ + R A+ + D+ +T RE +AF Y G ++ Sbjct: 84 RPDLKVQYVMVTPSTRMPAIIEGKADLECGSTTNN--RERREKVAFTIPHYIAGIRMLVK 141 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 GI L G ++ GTT+ L + + + + E A + D Sbjct: 142 TSSGIRKWDDLRGKTVVTTKGTTSVAELRKMNDVRVLNMNFLEAKDHAESFAMVETGKAD 201 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 A+ D LY + P ++ ++ D+++ P A + + DTE+ +V ++ Sbjct: 202 AFAMDDVLLYGFRANTKTPGDYAVVGDMLTVEPYAIMLSKDDTEFKRLVDRAMTNII 258 >gi|167562880|ref|ZP_02355796.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia oklahomensis EO147] Length = 264 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 82/247 (33%), Gaps = 16/247 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K ++ + T+ + +L ++K+RG L+ G+ F G+ GFDV Sbjct: 7 KKLLVTGLIGASFVAATAHAA--DLLDEVKQRGTLRIGLEGTFPPFNSKNPQGELVGFDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +A+++ + P ++ LQ+ + D++ T R L F P Sbjct: 65 DIAKAIAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDKR--RETLDFSPA 119 Query: 122 TYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F I K S+ L G + V GT + Sbjct: 120 YTFSSAQLIQRKDDTRQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKTYPGA 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A R DA D L L + P ++ S +P +G+ ++ Sbjct: 175 PEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGSNVGSANPSGIPFKKGNPKFAK 232 Query: 240 IVSWTHY 246 ++ Sbjct: 233 AIADAMT 239 >gi|312198103|ref|YP_004018164.1| extracellular solute-binding protein family 3 [Frankia sp. EuI1c] gi|311229439|gb|ADP82294.1| extracellular solute-binding protein family 3 [Frankia sp. EuI1c] Length = 311 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 51/231 (22%), Positives = 90/231 (38%), Gaps = 11/231 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDP 75 T+F +A L I++RG L G F G +GFD + R LS IF P Sbjct: 55 ATAFPASA-TLDRIRQRGELIVGTKFDQPLFGLQNPTTGKIEGFDTEIARLLSIRIFGSP 113 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++++ +K R +Q ++D++ R+ + F Y GQ ++ Sbjct: 114 DKVKFVETVSKNREPFIQQGKVDVVVATYTINDARKKL--VDFAGPYYTAGQDIMVKAGD 171 Query: 136 -GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + V+ L+G +C G+T+E L +A ++ + R DA Sbjct: 172 TTVHGVTDLNGKKVCTVEGSTSETNL----RAKAPGASVVLVDTYSSCAEQLLDGRVDAV 227 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 T D L L + ++ + P +I+GD + ++ T Sbjct: 228 TTDNVVLLGLVSQHKD--ALKLVGTAFTSEPYGIGLIKGDDGFRAFLNDTL 276 >gi|224966982|dbj|BAH28861.1| ABC transporter protein [Lactobacillus mucosae] Length = 285 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 63/276 (22%), Positives = 108/276 (39%), Gaps = 22/276 (7%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F ++ L + N S + IKKRG++K + L + V +G G+D+ Sbjct: 20 FLLAFAPLAGTVTAHAADNQSSVSAIKKRGYIKIAVFGDLPPYGWVNKDGKRVGYDLYLA 79 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 R ++ + +++ +NA R L S + D++ N T R+ + F Sbjct: 80 RRIAKDLGVKA---KFVQVNANNRVDTLNSNKADLVLANFTVTSERK--QTVDFAKPYMK 134 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 G + K I+ VSQL G + V GTT E F H + F+ + Sbjct: 135 VSVGVVSKKSDPITKVSQLKGQKLIVNKGTTAEQY----FTQHQTGASLLKFDSKTQQFN 190 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + R A D S LYA + P V + + S +APA+ +G+ N + Sbjct: 191 ALKNGRAKALADDNSYLYAW--VKNNPKYTVGIKQLGKSSYIAPAVKKGNKSLLNWTNK- 247 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280 IT+ N + N +++ + G + Sbjct: 248 ----------EITKLNGENFFEKDYNQELKPYFGSE 273 >gi|161524794|ref|YP_001579806.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189350452|ref|YP_001946080.1| polar amino acid transporter substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|160342223|gb|ABX15309.1| extracellular solute-binding protein family 3 [Burkholderia multivorans ATCC 17616] gi|189334474|dbj|BAG43544.1| polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] Length = 271 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 61/231 (26%), Positives = 89/231 (38%), Gaps = 11/231 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYL 81 A L DIKK G L+ F V A G DVD+ +AL+ + +Q Sbjct: 23 QADRLDDIKKAGVLRVATFDSNPPFGYVDAKTNRIVGLDVDYAKALADKLGVK---LQLQ 79 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P N R L S ++D++ N T R + F + GQ F+ K + S Sbjct: 80 PTNPANRIPFLTSGKVDLVLANFTITEERAK--QVDFSIPYFSSGQQFLAKKG-VLKSAD 136 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL+G I GTT E+TL + F + ++ AA RA A T D L Sbjct: 137 QLNGLRIGADKGTTNEITLREKFPKA----TIVAYDDTPFAFAALRAGNVQAITQDGPKL 192 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 L + I P IS + + +G+T V+ T + + Sbjct: 193 IGLLANVPDKQNYEIPPFTISNDYMGVGVPKGETRLLAFVNDTLKGLEASG 243 >gi|167035334|ref|YP_001670565.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166861822|gb|ABZ00230.1| extracellular solute-binding protein family 3 [Pseudomonas putida GB-1] Length = 305 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 84/237 (35%), Gaps = 8/237 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYL 81 L IK G + G + F+ + + G+ D A+ A+ K++Y Sbjct: 28 GTLKKIKDSGTITLGHRDSSIPFSYLAGKPEPVGYSHDIQLAVVDALKKQLGTDIKVKYN 87 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK---GIS 138 + ++ R +Q+ +D+ +T + R+ +G F + G + K Sbjct: 88 LVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVG--FSVGIFEVGTRLLTKVKDGQPAYK 145 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G ++ AGTT+E L MK + I + E + R A+ D Sbjct: 146 DFPDLAGKNVVTTAGTTSERILKAMNADKQMKMNVISAKDHGEAFNMLESGRAVAFMMDD 205 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L +PS+ VI S + + D + V + E+ Sbjct: 206 ALLAGEMAKARKPSDWVITGTPQSYEIYGCMVRKEDAAFKKAVDDAIVGYFKSGEVN 262 >gi|254555899|ref|YP_003062316.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum JDM1] gi|300767693|ref|ZP_07077603.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308179876|ref|YP_003924004.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|254044826|gb|ACT61619.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum JDM1] gi|300494678|gb|EFK29836.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045367|gb|ADN97910.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 278 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 89/256 (34%), Gaps = 17/256 (6%) Query: 1 MYK--DFFVSI--LCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M K ++ L ++++ T+ +L + K + G+ F + Sbjct: 1 MKKLKRLIGALGMLAMLVVVLTACGSRQSLAKQDVLTNDKASKTITWGVKADTKLFGLMD 60 Query: 52 -ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + KGFD D AL+ + + +++ + ++ R L++ ID + T R Sbjct: 61 VKDNQIKGFDADIATALTKRVLGKNATAKFVQVTSQTRIPLLKNGNIDAIIATMTITPER 120 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 E + F + GQ ++ K I SV L + T + K K Sbjct: 121 EK--QVDFTNSYFDAGQSLLVKKGSAIKSVKDL--NKSGTKVLGVTGANSVENIKKAAPK 176 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + A ++ + A T D LY + N + ++ +K P A+ Sbjct: 177 AKVLELSDYAQAMTALKSGQGVALTTDNGILYGMASQNPG---YEVVGGTFTKEPYGIAV 233 Query: 231 IQGDTEWYNIVSWTHY 246 +G ++ Sbjct: 234 NKGQEPLKKALNKALK 249 >gi|160899853|ref|YP_001565435.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160365437|gb|ABX37050.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 297 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 91/258 (35%), Gaps = 7/258 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M + L + L S + A +L ++ G L V F+ + +G G+ Sbjct: 1 MIFRQWGIALGALGLSALSCVSAAGVLDKVQAGGALVIAHRESSVPFSYIDTRSGKPVGY 60 Query: 60 DVDFCRALSSAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +D C L+ A+ K+++L + R ++ + D+ +T R Sbjct: 61 ALDLCLRLAEAVRKQTGRKDMKVEFLMVTPANRMAVIEQGKADMECGSTTNNAQR--RQT 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 +AF + G ++ I+++ L G + GT+ + + M + Sbjct: 119 VAFTVPHFITGARMLVKADSTINAMEDLKGKKLVSTKGTSPMALVTQANRQRLMGITIVE 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 DA+ D L L P ++ +S PLA + + DT Sbjct: 179 APDHARALEMVEKGEADAFVMDDVLLNGLAAARPDPRALKVVGKFLSTEPLAIMLPKADT 238 Query: 236 EWYNIVSWTHYAMVTAEE 253 + +V ++T+ E Sbjct: 239 AFKKLVDEEMKRIITSRE 256 >gi|251778453|ref|ZP_04821373.1| amino acid ABC transporter, substrate-binding protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082768|gb|EES48658.1| amino acid ABC transporter, substrate-binding protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 267 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 87/251 (34%), Gaps = 10/251 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K VS + I + + +N + + G++ V +G+ GFDV Sbjct: 6 KKLLIVSCVATIGVNLVACKSNKQ--ESASSKNEIIIGMDDTFVPMGFKDGSGETVGFDV 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +A+ + +++ ++ + L + ID++ T R+ + F + Sbjct: 64 DLAKAVGEKLNKK---VEFQSIDWSMKESELNNGNIDLIWNGYSITDERKE--NVEFSKV 118 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD--YFKAHNMKYHPIVFERV 179 + Q I I+S + L A + Q ++ + + + + FE Sbjct: 119 YLNNRQVIITLVDSKINSKNDLINAKVGAQNQSSAVDAIKADGDMMSKFDGGNVVTFETN 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A R DA D L ++ IL D A I +GDT + Sbjct: 179 NDALMDLEAGRIDAVVADE-ILAKYYTNERGKEKYKILNDDFGAEDYAVGIKKGDTSFVQ 237 Query: 240 IVSWTHYAMVT 250 + +++ Sbjct: 238 EFNNALNSVIE 248 >gi|118443622|ref|YP_878647.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Clostridium novyi NT] gi|118134078|gb|ABK61122.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Clostridium novyi NT] Length = 270 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 90/261 (34%), Gaps = 29/261 (11%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGD---------IKKRGFLKCGINTGLVGFAEV 50 M K + ++ + I+ T + + + +K G L G++ G Sbjct: 1 MKKIMSILLVIIMGIVSLTGCGSKGASTTNSSSDSSLASVKNSGKLLVGLDDGYPPMEFR 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + GFD+D + + + ++++ L LQSK+ D + T R Sbjct: 61 DEKNNLVGFDIDLAKEIGKKLGVK---VEFITTEFSGILLGLQSKKFDTIIAGFTMTDER 117 Query: 111 EISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGT----TTELTLADYFK 165 + L F GQ + K I +S L I Q G+ T E L D Sbjct: 118 KK--SLNFTEPYVLGGQIIAVKKGNNSIKKLSDLKEKVIGCQMGSAGQITAESKLKDI-- 173 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 + ++ E + R DA D A + +P + +L +++SK P Sbjct: 174 -----KELRKYGKITEAFSDMSIGRIDAVIMD--AQVGGYYISKKPGQFEVLDEMVSKEP 226 Query: 226 LAPAIIQGDTEWYNIVSWTHY 246 + A GD + V Sbjct: 227 MGIAFRMGDNALKDEVQKIIN 247 >gi|319784005|ref|YP_004143481.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169893|gb|ADV13431.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 260 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 91/253 (35%), Gaps = 13/253 (5%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F L+ FT+ S A L IK G LK ++ F V + G Sbjct: 1 MNRVFSGIAVAALLLASTFTAVSARADDLEKIKAAGELKISMSGQYPPFNFVNDQNEVVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD D +A++ I + I L + + D + + T RE + F Sbjct: 61 FDADIGKAIAERIGVKGTIIT---TAWDGIIAGLLTNKYDTVVGSMTITPEREKV--VDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G+ + ++ + S+ L G +I V G T E + + ++ Sbjct: 116 VGPYYHAGRAVFVSEQSKVQSLDDLKGKTIGVTLGETHEKWARE-----KGGWDIRTYKG 170 Query: 179 VEEIDAAYRAHRCDA-YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + E+ RA R DA +I + A+K T ++ + + AI + + E Sbjct: 171 LPELLLELRAGRVDAIVVDNIPVMVAVKETGEKVRKLNTPDIEGGAVAIGIAIRKDNPEL 230 Query: 238 YNIVSWTHYAMVT 250 + M+ Sbjct: 231 KAAMQKALDDMLA 243 >gi|307289499|ref|ZP_07569445.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0109] gi|306499517|gb|EFM68888.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecalis TX0109] Length = 273 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 89/252 (35%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 2 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R Sbjct: 62 IVGFDVDLAKAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 116 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + F + Q + K+K +++ S + G + VQ G++ D K Sbjct: 117 VQFTQPYMTNDQVLVSLKEKNVATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236 Query: 233 GDTEWYNIVSWT 244 D + ++ Sbjct: 237 SDNQLVQKINTA 248 >gi|186473393|ref|YP_001860735.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184195725|gb|ACC73689.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 296 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 85/243 (34%), Gaps = 6/243 (2%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIF 72 T ++ A L I + + + F+ + GF VD A+ A+ Sbjct: 17 GTMTASQAQTLDKIARTNQIVVSYRESAIPFSYLLTPHKAVGFSVDVTEAIVDDVRKALG 76 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 Y+P+ + R L ID+ +T T R + F ++ G + Sbjct: 77 RPDLHTVYVPVTGQNRIPLLIDGSIDLECGSTTNTSARGKEVA--FSTNYFYAGTRLMAK 134 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 ++ I + L+ ++ G+T E L A ++ ++ + + + Sbjct: 135 RESHIGDYADLAHKAVATVGGSTNEKVLRRQLDAEHVDADVVLTKDYADALREVANGKAA 194 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A D LY L+ P+ ++ + P A + + D + +V T ++ + Sbjct: 195 ALALDDVLLYGLRANASDPTTWEVVGKTLQVEPYACMVRKDDPTFKRLVDGTFARLMKSS 254 Query: 253 ELG 255 E Sbjct: 255 EFA 257 >gi|270290757|ref|ZP_06196981.1| glutamine transport system substrate-binding protein [Pediococcus acidilactici 7_4] gi|270280817|gb|EFA26651.1| glutamine transport system substrate-binding protein [Pediococcus acidilactici 7_4] Length = 277 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 93/266 (34%), Gaps = 20/266 (7%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVK- 51 M + F + L L + F + ++ L G+ F + Sbjct: 1 MRRRFKMLFLGLTAVLFLGILGGCTKQEAKQRDAWQTAQQTKTLTWGVKADTKLFGLMDV 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + KGFD+D +AL+ + ++ +++ + ++ R L++ +D + T R+ Sbjct: 61 KDSQIKGFDIDIAKALTKQMLGKDAQAEFVQVTSQTRIPLLKNGNLDAVIATMTITKDRQ 120 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNM 169 + F + GQ ++ K I SV L G + G + + + Sbjct: 121 KV--VDFSDSYFDAGQSLLVPKDSKIHSVRDLNHPGTKVIGVVGANSVSNVKKFAPKA-- 176 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 I + + A ++ + A T D L+ + D P + ++ +K P A Sbjct: 177 --QVIQLQDYAQALTALKSGQGAALTTDNGILFG--MAVDNP-QFKVVGKAFTKEPYGIA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255 I Q ++ ++ E Sbjct: 232 INQNQPALKKHLNQALEEIIANGEYN 257 >gi|28210295|ref|NP_781239.1| cystine/glutamine-binding periplasmic protein [Clostridium tetani E88] gi|28202731|gb|AAO35176.1| cystine/glutamine-binding periplasmic protein [Clostridium tetani E88] Length = 272 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 93/260 (35%), Gaps = 26/260 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--------------SILGDIKKRGFLKCGINTGLVG 46 M K + ++ L+ + N S L IKK G LK G+N Sbjct: 1 MKKTLSILVVFLVSMLLIIGCGNKNTSNKGNDKNNKSLSTLEKIKKDGVLKMGLNDTYPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + + GFDVD + ++ + ++ + + L+L+SK+ D++ Sbjct: 61 MEFRDESHNLVGFDVDLGKEIAKKLGVK---LEIITNDWSGIVLSLKSKKYDMILSTMSI 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFK 165 T R+ + F GQ ++ K + I V L G I Q GTT E++ Sbjct: 118 TEERKKEM--NFSEPYIVGGQKLVVKKDEKDIKKVEDLKGKVIGCQMGTTGEVSANKIEG 175 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 ++ V + R +A D A R + V+L ++ P Sbjct: 176 IK----ELKKYDGVTQAFNDLSVGRINAVIAD--GQVAGYYLKKRSGDLVLLDTKLTSEP 229 Query: 226 LAPAIIQGDTEWYNIVSWTH 245 + + DT+ + V T Sbjct: 230 VGIGFRKEDTDIRDEVQKTL 249 >gi|220926542|ref|YP_002501844.1| family 3 extracellular solute-binding protein [Methylobacterium nodulans ORS 2060] gi|219951149|gb|ACL61541.1| extracellular solute-binding protein family 3 [Methylobacterium nodulans ORS 2060] Length = 305 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 87/252 (34%), Gaps = 12/252 (4%) Query: 4 DFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 F IL + + + + L IK + G+ G F+ + + + G Sbjct: 2 RIFGMILAMALAMPVAAAPTGAGELTGTLKKIKDSNRIVLGVRDGGPPFSYIDNDQKYVG 61 Query: 59 FDVDFCRALSSAIFDDPS----KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + +D C + AI + + +++ P+ + R + + ID+ +T R+ Sbjct: 62 YTIDICDKIIDAIKKEINAPTLQVEMNPVTSSTRIPLMTNGTIDLECGSTTNNPERQK-- 119 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F + F K + I+ + L G ++ AG+T + + + Sbjct: 120 QVTFTNAHFVTTSRFASKKAQNINKIDDLKGKTVVSVAGSTNLVQINKVNSERKLGLTIQ 179 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQG 233 + E R A+ D L L + P+ + I D + P + + Sbjct: 180 AAKDTVEAFLLLETDRAAAFVMDDVQLSILIALSKDPAAYTISEDAFALPEPYGIMLRRN 239 Query: 234 DTEWYNIVSWTH 245 D + +V Sbjct: 240 DEPFKAVVDRAT 251 >gi|226310676|ref|YP_002770570.1| amino acid ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] gi|226093624|dbj|BAH42066.1| amino acid ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] Length = 258 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 87/248 (35%), Gaps = 11/248 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++S+L ++ ++A D L GI+ + GFD Sbjct: 1 MKKIAWMSLLLGAVVSLVVGCSSAKTGAD---ANKLIIGIDDKFAPMGFRDEKNELVGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D+ RA + ++++ ++ + L S +ID++ T R+ + F Sbjct: 58 IDYARAAGEKMGK---QVEFQTIDWSAKESELNSGRIDLIWNGYTITDERKG--KVLFTK 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q + ++ +S L+G +I +Q ++ + + ++ F Sbjct: 113 PYLKNAQVVVTKANSNLTKLSDLAGKAIGLQKLSSAADAINASEIKNQVQ-SITEFPDNV 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + R +A D + A P L + +S + +G+ Sbjct: 172 LALSDLKIGRVEAVVID--QIVADYYMAKEPGAFKQLEESLSPEEYGIGVKKGNEALQKE 229 Query: 241 VSWTHYAM 248 + AM Sbjct: 230 LQKALDAM 237 >gi|305432021|ref|ZP_07401188.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter coli JV20] gi|304445105|gb|EFM37751.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter coli JV20] Length = 259 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 8/228 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDP 75 FTS + L IK +G L G+ + +A + A G+ KGF+VD + L+ +I D Sbjct: 21 FTSANAAEGKLEAIKAKGELVIGVKNDVPHYALLDQATGEIKGFEVDVAKMLAKSILGDE 80 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +K++ + +NAK R L + +D + T R+ F Y D G ++ K+K Sbjct: 81 NKVKLIAVNAKTRGPLLDNGSVDAVIATFTITPERKRV--YNFSEPYYQDAVGLLVLKEK 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 S++ ++GA+I V TT+ + K +K F I AA A R DA++ Sbjct: 139 NYKSLADMNGATIGVAQAATTKKVINTAAKKIGVKVKFSEFPDYPSIKAALDAKRIDAFS 198 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 D S L + + ILPD + D + N V+ Sbjct: 199 VDKSILLGY-----KDENNEILPDSFDPQSYGIVTKKDDANFSNYVND 241 >gi|268318929|ref|YP_003292585.1| ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] gi|262397304|emb|CAX66318.1| ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] Length = 249 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 84/246 (34%), Gaps = 6/246 (2%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 L + + IK RG L G++ V + NG GFDVD +A Sbjct: 1 MLTSVGVAGCQGQENSWQAIKSRGTLVIGVDDSFVPMDFRQKNGKLVGFDVDLAKAACKE 60 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 I P + ++ + L++ ID++ T R +AF + Q + Sbjct: 61 IGLKPD---FQTIDWSMKETELRNGTIDVIWNGYTKTKARAK--KVAFSKPYLENDQILV 115 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-PIVFERVEEIDAAYRAH 189 K +GI++ Q+ G + VQ G++ L +Y K + ++++ +A Sbjct: 116 TRKNEGINNYRQMRGKILGVQTGSSGADDLDNYPKVLKKRVKSTVLYDTYNNAFIDLKAG 175 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R D D + E + I + D N ++ + Sbjct: 176 RIDGLLIDGVYANYYLAHSKYQKEFKKEKLPYPSEKFSVGINKKDETLKNKINQALDHLE 235 Query: 250 TAEELG 255 EL Sbjct: 236 KTGELK 241 >gi|237650055|ref|ZP_04524307.1| amino acid ABC transporter periplasmic protein [Streptococcus pneumoniae CCRI 1974] gi|237822716|ref|ZP_04598561.1| amino acid ABC transporter periplasmic protein [Streptococcus pneumoniae CCRI 1974M2] gi|332075991|gb|EGI86457.1| putative amino-acid transporter periplasmic solute-binding protein [Streptococcus pneumoniae GA41301] Length = 288 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 103/259 (39%), Gaps = 27/259 (10%) Query: 1 MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44 M K ++ L F + + A + +IKK G L+ + Sbjct: 1 MKLFKPLLTVLVLAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V +G ++G+D++ L+ + ++Y+ ++A R L S ++DI+ N Sbjct: 61 KLFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYISVDAANRAEYLISNKVDIILANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + K I+ V QL G ++ V GTT E F Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + ++ + +++ + A R DA++ D + + A + V + + Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229 Query: 225 PLAPAIIQGDTEWYNIVSW 243 +A A+ +G+ E + ++ Sbjct: 230 TIAAAVQKGNQELLDFINK 248 >gi|94313505|ref|YP_586714.1| glutamate/aspartate ABC transporter periplasmic solute-binding protein [Cupriavidus metallidurans CH34] gi|93357357|gb|ABF11445.1| glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein [Cupriavidus metallidurans CH34] Length = 304 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 48/227 (21%), Positives = 89/227 (39%), Gaps = 8/227 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDPSKI 78 + +L I+ G + G + F+ G G+ VD C ++ A + K+ Sbjct: 33 QSPVLDRIRDSGTITLGYRESALPFSFGDDKGQPAGYAVDLCLRVAEAAKEKLGLKTIKV 92 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++LPL + R A+ + +D+ TL R+ + F Y ++ GI Sbjct: 93 RWLPLTPQNRVPAVVNGLVDLDCAPNTNTLERQKQVA--FSVSHYVSTVRMLVRADSGIK 150 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S L G ++ AG+T + + + + + + E R A+ D Sbjct: 151 SFDDLRGKTVVTSAGSTGDRHVRRLKAEYGYRD--VYAKDHGESFLLLETGRAQAFVMDD 208 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L L+ + PS++VI+ +S A + + D EW +V T Sbjct: 209 VLLAGLRAKSKDPSQYVIVGPALSVEQNALMLSKADPEWKRLVDQTL 255 >gi|28210296|ref|NP_781240.1| cystine/glutamine-binding periplasmic protein [Clostridium tetani E88] gi|28202732|gb|AAO35177.1| cystine/glutamine-binding periplasmic protein [Clostridium tetani E88] Length = 271 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 82/261 (31%), Gaps = 24/261 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-----------ILGDIKKRGFLKCGINTGLVGFAE 49 M K + + L++ + +L IK +K G+ Sbjct: 1 MKKILALLLSTLVVGSIFVGCSKNDNKEKDDKKNVNVLQKIKDNKVIKVGLEDTYPPMEF 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 + GFD+D C + + ++Y+ ++L S +ID+ + T Sbjct: 61 RNEKNELIGFDIDLCDEIGKRLGGK---VEYVMTEFGGLMMSLNSNKIDMSASAISITEE 117 Query: 110 REISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R+ F GQ ++ K I L G + Q GTT E+ Sbjct: 118 RKK--EAEFTKPYVDSGQALVVKKGNTSIKDEKDLKGKIVGAQLGTTGEIAAKKIEGVK- 174 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 +++V ++ R DA D SE + + + P+ Sbjct: 175 ---EVKAYDKVPQVFQDLEIGRIDAVIVDEFVGRYYLSKQKDKSE---VIKSLEQEPIGI 228 Query: 229 AIIQGDTEWYNIVSWTHYAMV 249 A +G+ E V M+ Sbjct: 229 AFKKGEKELQEEVQKIIDEMI 249 >gi|227512774|ref|ZP_03942823.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus buchneri ATCC 11577] gi|227522898|ref|ZP_03952947.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus hilgardii ATCC 8290] gi|227083974|gb|EEI19286.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus buchneri ATCC 11577] gi|227089927|gb|EEI25239.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus hilgardii ATCC 8290] Length = 277 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 102/266 (38%), Gaps = 20/266 (7%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVK- 51 M K V L ++++ + S+ + +L D K+ + G+ F + Sbjct: 1 MRKILSRVGLVVALLIMVVSLGACSSTSGSKRDVLKDDKQSNTITWGVKADTKLFGLMDV 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + KGF+VD +A++ I K +++ + ++ R L + ID + T R Sbjct: 61 KDNQIKGFEVDLAKAMTKEILGKKGKARFIQVTSQTRMPLLANGNIDAIMATMTITPQRA 120 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNM 169 + F + GQ ++ I +V L+ GA + G+ + + + Sbjct: 121 E--QVDFSRSYFDAGQAILVKDGSPIKNVRSLNRKGAVVLGVVGSNSVQNIKKFAPKA-- 176 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + A ++ + DA T D LY ++ + P + ++ +K P A Sbjct: 177 --RVLQLSDYSQALTALKSGQGDALTTDNGILYG--MSIENPG-YSVVGGTFTKEPYGIA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255 +G ++N ++ + + E Sbjct: 232 TAKGQRPFHNAINHALTKVENSGEYN 257 >gi|226361323|ref|YP_002779101.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4] gi|226239808|dbj|BAH50156.1| putative ABC transporter substrate-binding protein [Rhodococcus opacus B4] Length = 324 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 52/222 (23%), Positives = 88/222 (39%), Gaps = 10/222 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + I+ RG L G++TG + G +GFDVD R +S +F DP ++ Y L Sbjct: 79 PTVDAIRARGRLVVGLDTGSNLMSFRDPATGAIEGFDVDVAREISRDLFGDPDRLDYRIL 138 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R ALQ +DI+++ T + +AF + Q ++ K I S + L Sbjct: 139 TSANREKALQESMVDIVAKTMTITC--DRKERVAFSSEYFEAQQRVLVVKGSPIRSAADL 196 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G +CV GTT+ L + + + + DA + D + L Sbjct: 197 DGKRVCVVRGTTSLTRLQQVAPTA----EILTVPMWSDCLVVLQQRQVDAVSTDDTILAG 252 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L + I+ D + P I + + + V+ T Sbjct: 253 LASQDP---YLEIVGDSMGAEPYGVGITKANEDLVRFVNGTL 291 >gi|167836761|ref|ZP_02463644.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis MSMB43] Length = 264 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 87/252 (34%), Gaps = 19/252 (7%) Query: 1 MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K V+ L + F + + A +L ++K+RG L+ G+ F G+ Sbjct: 1 MKIASLKKLLVAGL-IGASFVAATAHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGEL 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD +A+++ + P ++ LQ+ + D++ T R+ L Sbjct: 60 VGFDVDIAKAVAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDQRK--QTL 114 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F P F I K +S+ L G + V GT Sbjct: 115 DFSPAYTFSSAQLIQRKDDTRQFTSLEDLKGKKLGVALGTNYMD-----MAKSVPGVDVK 169 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E A R DA D L L + P ++ S +P +G+ Sbjct: 170 TYPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGN 227 Query: 235 TEWYNIVSWTHY 246 ++ ++ Sbjct: 228 PKFAKAIADAMT 239 >gi|239813837|ref|YP_002942747.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239800414|gb|ACS17481.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 300 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 100/238 (42%), Gaps = 7/238 (2%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIFDDPSK 77 L IK G + G+ G + NG + GF D C + + + + Sbjct: 21 QANDTLAKIKASGSITEGVRESS-GLSYTLGNGQYTGFHYDICANIIKDIQKHLGLAKLE 79 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +Y P+ ++ R +Q+ +D+ +T R+ ++F TY + + GI Sbjct: 80 TKYQPVTSQNRVPLVQNGTVDLECGSTTNNATRQK--DVSFAVTTYVEEVRIAVKANSGI 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +S+ L+G ++ GTT+ TL +A + + + + + + R DA+ D Sbjct: 138 NSIKDLNGKTVATTTGTTSVQTLRKNERAGGIDFKELYGKDHSDSFLLLESGRADAFVMD 197 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 S L + + P++ I+ +++S P+A I + D + +V + A + +L Sbjct: 198 GSILASNIAKSKSPADFKIVGEVLSVEPIAIMIRKDDPAFKKVVDDSIKAQIKNGDLA 255 >gi|73542698|ref|YP_297218.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72120111|gb|AAZ62374.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 265 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 85/254 (33%), Gaps = 11/254 (4%) Query: 1 MYKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K + ++ + L + A + G++ +N + Sbjct: 1 MKKFAALLLISTVALLGACGKKESAPAAGTEPAPVAATKIIVGLDDNFPPMGFRDSNNEL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D + S + +++ P++ + L K++D+L T R+ + Sbjct: 61 VGFDIDMAKEASRRLG---LTVEFKPIDWSAKEAELNGKRVDVLWNGLTITEERK--QNI 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 +F + Q I+ + + + LSG + Q G++ + + F Sbjct: 116 SFTAPYMTNHQIVIVGTNSPVKTKADLSGRIVGAQDGSSAVDAIKKEAQVAGSLKELKTF 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 A R DA D + L + R E+ +L + + + D E Sbjct: 176 GDNVTALMDLSAGRLDAIVVDE--VVGRYLISKRAGEYRVLDENFGTEDYGVGVRKDDAE 233 Query: 237 WYNIVSWTHYAMVT 250 + T ++M Sbjct: 234 LLGKLDKTLHSMKE 247 >gi|308071222|ref|YP_003872827.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Paenibacillus polymyxa E681] gi|305860501|gb|ADM72289.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Paenibacillus polymyxa E681] Length = 291 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 10/231 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 +S S + + DIKK G ++ G+ F V + G +GFDV + + + D S Sbjct: 32 GSSGSAKFASIEDIKKNGKIRIGVFADKPPFGYVDSEGKNQGFDVYIAKRFAKDLLGDES 91 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K++++ ++A R L+S ++DI+ N T R+ + F G + Sbjct: 92 KVEFVLVDAASRVAYLESNKVDIIMANFTVTDERKE--KVDFANPYMKLSFGIVSPDSAP 149 Query: 137 ISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+++ QL + V GTT E F + + F++ EI +A + R A Sbjct: 150 ITTIDQLKNSDQKLIVAKGTTAETY----FTKNYPDIKLLKFDQYTEIFSALKDKRGAAI 205 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D + L A P V +P + +APA+ +G+ E + ++ Sbjct: 206 ANDNTELIAWA--KANPGFTVTIPAFGGQDTIAPAVAKGNKELLDWINNEL 254 >gi|304386276|ref|ZP_07368609.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Pediococcus acidilactici DSM 20284] gi|304327633|gb|EFL94860.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Pediococcus acidilactici DSM 20284] Length = 277 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 93/266 (34%), Gaps = 20/266 (7%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVK- 51 M + F + L L + F + ++ L G+ F + Sbjct: 1 MRRRFKMLFLGLTAVLFLGILGGCTKQEAKQRDAWQTAQQTKTLTWGVKADTKLFGLMDV 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + KGFD+D +AL+ + ++ +++ + ++ R L++ +D + T R+ Sbjct: 61 KDSQIKGFDIDIAKALTKQMLGKDARAEFVQVTSQTRIPLLKNGNLDAVIATMTITKDRQ 120 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNM 169 + F + GQ ++ K I SV L G + G + + + Sbjct: 121 KV--VDFSDSYFDAGQSLLVPKDSKIHSVKDLNHPGTKVIGVVGANSVSNVKKFAPKA-- 176 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 I + + A ++ + A T D L+ + D P + ++ +K P A Sbjct: 177 --QVIQLQDYAQALTALKSGQGAALTTDNGILFG--MAVDNP-QFKVVGKAFTKEPYGIA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255 I Q ++ ++ E Sbjct: 232 INQNQPALKKHLNQALEEIIANGEYN 257 >gi|107028354|ref|YP_625449.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116686350|ref|YP_839597.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105897518|gb|ABF80476.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116652065|gb|ABK12704.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 313 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 51/241 (21%), Positives = 97/241 (40%), Gaps = 6/241 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75 + + L ++ G + G + F+ + A G+ ++ C+AL ++I + Sbjct: 38 APAQLTGTLAKVRGSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVASIEDAINQS 97 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 I+++P+ + R A+ S ++D+ +T L R+ + F PI + G ++ + Sbjct: 98 LTIRWVPVTSDNRIDAVVSGKVDLECGSTTSNLERQKRVA--FSPIFFVAGTKVMVKRGA 155 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L+G + V AGTT E L D + V + A DA+ Sbjct: 156 PIRSFRDLAGKKVAVTAGTTNEKALRDLNDKFRLGVQLQVVPDHAQGFALVANGSADAFA 215 Query: 196 GDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D LY L + ++ ++ D +S P + D + IV T + E+ Sbjct: 216 TDDVLLYGLIAENASKGGQYDVVGDFLSYDPYGIMFRKDDPQLAQIVKSTFQELAADGEI 275 Query: 255 G 255 Sbjct: 276 A 276 >gi|253987650|ref|YP_003039006.1| periplasmic binding transport protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779100|emb|CAQ82260.1| putative periplasmic binding transport protein [Photorhabdus asymbiotica] Length = 287 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 60/248 (24%), Positives = 94/248 (37%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M V+ L L L + A L DIKK G ++ + F + G+ Sbjct: 10 MKSRVLVTAL-LAGLALVTGVAKADKLDDIKKAGTVRIAVFDSNPPFGFIDPQTKKLAGY 68 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A+++ + ++ P N R L SK+ID+++ N T R + F Sbjct: 69 DVDIANAIANDLGVK---LELRPTNPANRLPLLASKKIDLIAANFTVTDERAK--QVDFS 123 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + S + I GT E+TL +++ I ++ Sbjct: 124 IPYFATGQKFIARKG-VLKSPEDIKNLRIGADKGTVQEITLREHYPTAK----VISYDDT 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237 AA R A T D + L L E I P I++ A A +G+ Sbjct: 179 PLAFAALRNGNVQAITQDDAKLVGLLANVPAAQKAEFEISPFSITREYQAVAAAKGEGRL 238 Query: 238 YNIVSWTH 245 +V+ T Sbjct: 239 VEVVNQTL 246 >gi|319761717|ref|YP_004125654.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|317116278|gb|ADU98766.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] Length = 286 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 106/279 (37%), Gaps = 17/279 (6%) Query: 2 YKDFFVSILCLII---LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWK 57 F ++ + + S S +A L +IK + L CG + F + Sbjct: 4 KIRLFSTLAATAMGLGVAALSASAHADQLANIKAKKTLVCGTFAAIPPFGYPDPKTRETI 63 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D++ CRA++ + + + L+ IDI+ N +T R + Sbjct: 64 GSDIELCRAVAKEMGVNAEIRGF---PVGVHIPELKLGHIDIIIANMGYTKTRAE--QVE 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + ++ K GI ++S L G I G+T+E + K P+ ++ Sbjct: 119 FSDAYNVGAEVAVVPKDSGIKTLSNLDGKKISATKGSTSETAIKLRLKEA----QPLTYQ 174 Query: 178 RVEEIDAAYRAHRCDAYTGDI-SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 A + + DA+ + SA + P V+L + + P+ + +G+T Sbjct: 175 DASSAFLALQQGKVDAFVINNVSAAAFANQSQKGPKPSVVLDEPLYVQPVVIGMTKGETA 234 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 ++ + E+ G ++ N+ D ++ ++R Sbjct: 235 LIREINTILRKL---EDSGYMDQHWNKWFGDGSDYKLKR 270 >gi|120609704|ref|YP_969382.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120588168|gb|ABM31608.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 267 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 31/251 (12%), Positives = 77/251 (30%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANG 54 M K ++++ L L +++ + G++ Sbjct: 1 MKKIAAIALVSLGALLAACGKNDSAQPAASTPATPAAAVTKIVIGLDDNFPPMGFRDDKN 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+D R + + + +++ P++ + L +++D L T R+ Sbjct: 61 QLVGFDIDMAREAAKRMGVE---VEFKPIDWSAKEAELSGRRVDALWNGLTITEERK--Q 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 +AF + Q ++ + + + L+G + Q G++ + Sbjct: 116 NIAFTAPYMENHQIIVVAANSPVKTKADLAGKIVGAQEGSSAVDAVKKEEAVFKSFKEFK 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F R +A D + +P ++ +L + + + D Sbjct: 176 TFGDNVTALMDLSTGRLEAVVVDE--VVGRYYVAKKPQDYAVLDEHFGTEEYGVGVRKDD 233 Query: 235 TEWYNIVSWTH 245 T + Sbjct: 234 TALQGRLDKAL 244 >gi|167562821|ref|ZP_02355737.1| extracellular solute-binding protein, family 3 [Burkholderia oklahomensis EO147] gi|167570001|ref|ZP_02362875.1| extracellular solute-binding protein, family 3 [Burkholderia oklahomensis C6786] Length = 271 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 70/325 (21%), Positives = 103/325 (31%), Gaps = 63/325 (19%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + L L + +A L DIKK G L+ F V G Sbjct: 1 MKLKPLATWLIGFSLVAAHAAAHADRLDDIKKAGVLRVATFDSNPPFGFVDPKTNRIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + ++ P N R L S ++D++ N T R + F Sbjct: 61 DVDYAQALADKLGVK---LKLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F+ K + S QLSG I GTT E+TL D + + ++ Sbjct: 116 IPYFASGQQFLAKKG-VLKSADQLSGLRIGADKGTTNEVTLRDKYPKA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + I IS + + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEIPAFTISNDYMGVGVPKGETRLVA 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299 V T GL D Sbjct: 231 FVDDTLK-------------------------------------------GLEAD----- 242 Query: 300 IRHMGNYGEMFDRNLGNQSELKIPR 324 G G ++D G ++ + R Sbjct: 243 ----GRAGRIYDAWFGPSTKTPLTR 263 >gi|319761572|ref|YP_004125509.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|330823440|ref|YP_004386743.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans K601] gi|317116133|gb|ADU98621.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|329308812|gb|AEB83227.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus denitrificans K601] Length = 265 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 35/249 (14%), Positives = 79/249 (31%), Gaps = 11/249 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG----FLKCGINTGLVGFAEVKANGDW 56 M K V++L L + + + G++ + Sbjct: 1 MKKIAAVALLSLGAVLAGCSKQENAPAPAAAPAPAAVTQIVVGLDDNFPPMGFRDEKNEL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D + + + ++++ P++ + L K++D+L T R+ + Sbjct: 61 VGFDIDMAKEAAKRLG---LQVEFKPIDWSAKEAELSGKRVDVLWNGLTITEERK--QNI 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 AF + Q ++ I + + L+G + Q G++ + F Sbjct: 116 AFTAPYMENHQIIVVPAGSAIKAKADLAGKVVGAQEGSSAVDAIKKEDAVFKSFKEFKTF 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 R +A D + +P ++ +L D + + DTE Sbjct: 176 GDNVTALMDLSTGRLEAVVVDE--VVGRYYVAKKPDQYEVLDDNFGTEEYGVGLRKDDTE 233 Query: 237 WYNIVSWTH 245 + + Sbjct: 234 LHGKLDKAL 242 >gi|320334508|ref|YP_004171219.1| ABC transporter periplasmic subunit [Deinococcus maricopensis DSM 21211] gi|319755797|gb|ADV67554.1| ABC-type transporter, periplasmic subunit family 3 [Deinococcus maricopensis DSM 21211] Length = 278 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 9/222 (4%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQYLPLN 84 I + G G+ F V +GD GFDVD + ++ + K++ + Sbjct: 22 DQICQDGKFTAGVKYDSPPFGFVNEDGDVGGFDVDLVKEIAKDLSAACKKTVKLELKQVT 81 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +K R +Q+ +D+ + T R + F + DGQ ++ I SV L+ Sbjct: 82 SKNRIEFVQNGTVDLAAATATATYGR--MDVVDFSNTYFIDGQRLLVPANSAIKSVKDLA 139 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G + G+T+E L KA K + F++ + A + R DA + D + L L Sbjct: 140 GKRVGTAQGSTSEANL----KAAAPKASVVSFQQYTDAFTALQQGRVDAVSTDSTILLGL 195 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 K + PS+ I+ S P + Q D++W N V+ + Sbjct: 196 KASAPDPSKFKIVGAYFSNEPYGIILKQNDSKWRNFVNESLT 237 >gi|148997221|ref|ZP_01824875.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP11-BS70] gi|168575367|ref|ZP_02721303.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae MLV-016] gi|307067313|ref|YP_003876279.1| amino acid ABC transporter/signal transduction system periplasmic domain-containing protein [Streptococcus pneumoniae AP200] gi|147756921|gb|EDK63961.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP11-BS70] gi|183578414|gb|EDT98942.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae MLV-016] gi|306408850|gb|ADM84277.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Streptococcus pneumoniae AP200] Length = 288 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 103/259 (39%), Gaps = 27/259 (10%) Query: 1 MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44 M K ++ L F + + A + +IKK G L+ + Sbjct: 1 MKLFKPLLTVLVLAFALIFITACSSGGNAGSSSGKTTAKARTIDEIKKSGELRIAVFGDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V +G ++G+D++ L+ + ++Y+ ++A R L S ++DI+ N Sbjct: 61 KLFGYVDNDGSYQGYDIELGNQLAQNLGVK---VKYISVDAANRAEYLISNKVDIILANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + K I+ V QL G ++ V GTT E F Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + ++ + +++ + A R DA++ D + + A + V + + Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229 Query: 225 PLAPAIIQGDTEWYNIVSW 243 +A A+ +G+ E + ++ Sbjct: 230 TIAAAVQKGNQELLDFINK 248 >gi|257083724|ref|ZP_05578085.1| extracellular solute-binding protein [Enterococcus faecalis Fly1] gi|256991754|gb|EEU79056.1| extracellular solute-binding protein [Enterococcus faecalis Fly1] Length = 273 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 89/252 (35%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 2 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R Sbjct: 62 IVGFDVDLAKAVFK---LYSISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 116 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + F + Q + K+K I++ S + G + VQ G++ D K Sbjct: 117 VQFTQPYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236 Query: 233 GDTEWYNIVSWT 244 D + ++ Sbjct: 237 SDNQLVQKINTA 248 >gi|291302012|ref|YP_003513290.1| extracellular solute-binding protein family 3 [Stackebrandtia nassauensis DSM 44728] gi|290571232|gb|ADD44197.1| extracellular solute-binding protein family 3 [Stackebrandtia nassauensis DSM 44728] Length = 323 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 86/228 (37%), Gaps = 12/228 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSK 77 S S ++ + I G LK G++ +G+ KGFDV R ++ + D K Sbjct: 72 SGSKSSDDIKRIVDAGVLKVGVDQTTNLMGYRDPASGNMKGFDVAIAREIAKELLGDEDK 131 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 IQ++ +N+K R AL+ +++D++ R R +G F Y Q ++ Sbjct: 132 IQFVTMNSKGRIPALKERKVDLVVRTMTMNCDRWKDIG--FSAEYYTAHQRVLVPS-SAS 188 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + L G +C +T+ + D KA P+ + + A + D Sbjct: 189 DDIDDLKGEKVCAAEDSTSLNRIRDDLKAK-----PVSAREWTDCMILLQQGDVAAMSTD 243 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + L + + ++ +S P + D V+ T Sbjct: 244 DTILAGMAAQDPN---TKVIGKDLSDEPYGIGANKEDVGLIKFVNKTL 288 >gi|257125932|ref|YP_003164046.1| extracellular solute-binding protein family 3 [Leptotrichia buccalis C-1013-b] gi|257049871|gb|ACV39055.1| extracellular solute-binding protein family 3 [Leptotrichia buccalis C-1013-b] Length = 262 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 92/265 (34%), Gaps = 20/265 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL---GDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + IL L + + I K + G++ V G+ Sbjct: 1 MKKMLLLMILALSVFMCSVQKEEKKEEKNADGIPK--KIVVGLDDSFVPMGFKNEKGEIV 58 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D RA++ + + +++ P+N + L L ID++ T R+ + Sbjct: 59 GFDIDLARAVAQKLGAE---VEFKPINWDSKILDLNGGNIDLIWNGLTITEERKKETEM- 114 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + Q ++ I++ + L+G +I Q ++ E + K + Sbjct: 115 -TKPYFTSHQLIVVKAGSSINAKADLAGKNIGSQTESSGEEAVKKSGDDKKFK-EFKTYA 172 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTND---RPSEHVILPDIISKSPLAPAIIQGD 234 + ++ A R DA D K T + + + IL D + A +G+ Sbjct: 173 QYDQAFMDLDAGRVDAIIADEVLAKYTKKTKETQAKKELYKILNDNYGEEEYGIAAKKGN 232 Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259 + ++ EEL Sbjct: 233 IKLVEAINKAI------EELKADGT 251 >gi|221195872|ref|ZP_03568925.1| amino acid transport protein [Atopobium rimae ATCC 49626] gi|221184346|gb|EEE16740.1| amino acid transport protein [Atopobium rimae ATCC 49626] Length = 296 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 59/288 (20%), Positives = 104/288 (36%), Gaps = 29/288 (10%) Query: 2 YKDFFVSILCLIILFFTSF-------------STNASI---LGDIKKRGFLKCGINTGLV 45 + F + ++ + + + DIKK G + G + Sbjct: 10 RRAFLAGAASFSTMLLSACDHGGGQTATGGGSAGASDTFRSVDDIKKAGTVNIGYFSDKA 69 Query: 46 GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 F V +G G+DV F L+ + + Y+ + R LQS + DI+ N Sbjct: 70 PFGYVDKDGKPAGYDVVFGNRLAKDLGVEA---NYISTDGLNRVPFLQSNKADIMLANFT 126 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 T R + F G + + I SV +L G + V GTT E F+ Sbjct: 127 VTDERAE--KVDFSLPYMKIKLGIVSPESAVIKSVDELKGKKLIVSKGTTAETY----FE 180 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 + + + F+ + A R DA++ D + + A P V + D+ + Sbjct: 181 KNYPEVTMVKFDSYADAYNALLDGRGDAFSTDNTEVLAW--VKSNPGFVVGVDDLGNADT 238 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 +A A+ +G+T ++ + AEE K+ + K DV Sbjct: 239 IAAAVHKGNTSLLEFINNEITGPL-AEE-NFFHKDYEETLKPVFGDDV 284 >gi|154148477|ref|YP_001406034.1| antigenic protein [Campylobacter hominis ATCC BAA-381] gi|153804486|gb|ABS51493.1| antigenic protein [Campylobacter hominis ATCC BAA-381] Length = 266 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 56/232 (24%), Positives = 104/232 (44%), Gaps = 6/232 (2%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + S S L +IK+ +K G+ L F+ +G+++GF++ +A+ ++I Sbjct: 1 MLICSCFAFGSTLEEIKQSKVIKIGVRLNLPPFSNQNEHGEFEGFEISLAKAIGASILGK 60 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +IQ + LNAK+R LQ+ +D++ N T R + F + QG + K Sbjct: 61 NGEIQLVGLNAKDRIPYLQNGTVDLILANFSKTEERAK--SVDFATPYLSNTQGILTKKS 118 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + I S+SQL+G I GTTT+ L + P+ + V + + + D Y Sbjct: 119 ENIRSISQLAGKKILFIKGTTTDDYLKANAAKLGI--TPVECQSVNKCFQSLQKGEADGY 176 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + L+L +D + + +I S + P + +G+ V+ + Y Sbjct: 177 MHTSILIAFLQLLDDN--IEMGIQNIGSIEFICPGVKKGNEALLEAVNASIY 226 >gi|34556716|ref|NP_906531.1| binding component of ABC transporter [Wolinella succinogenes DSM 1740] gi|34482430|emb|CAE09431.1| BINDING COMPONENT OF ABC TRANSPORTER [Wolinella succinogenes] Length = 267 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 92/247 (37%), Gaps = 15/247 (6%) Query: 1 MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + ++ + L S S L +I KRG L+ G+ G + F G+ GF Sbjct: 1 MKKIWLGILISVCTLLGADMSLWQKSTLNEIIKRGELRVGLEPGYLPFEMKDKKGNVIGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD R ++ A+ ++ +P + L +++ DI+ + R +L + F Sbjct: 61 DVDLAREMAKAMGVK---LKLVPTSWDGLIPGLVTEKFDIIISGMTISQER--NLRVNFV 115 Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIV 175 GQ ++ K + S L + + + E FK Sbjct: 116 EPYIVVGQSLLVKKGLEKGVKSYKDLDKPELTLVTKFGVSAEYAAKRLFK----NAKLKT 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ E + D + D+ A + V L ++ PL AI +GD Sbjct: 172 YDTEAEAVQEVLNGKADMFIFDLPFNVAFMAQKGQGY-LVHLDTSLTYEPLGWAIKKGDP 230 Query: 236 EWYNIVS 242 ++ N ++ Sbjct: 231 DFLNWLN 237 >gi|109947011|ref|YP_664239.1| polar amino acid transport system substrate-binding protein [Helicobacter acinonychis str. Sheeba] gi|109714232|emb|CAJ99240.1| polar amino acid transport system substrate-binding protein [Helicobacter acinonychis str. Sheeba] Length = 277 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 111/263 (42%), Gaps = 17/263 (6%) Query: 1 MY-KDFFVS---ILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M F + L LI L F + S + L IK+RG LK G+ + F V + Sbjct: 1 MKTNKLFKAWGLFLILIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G ++G+DV + + + D +KI+++P+ A R L++ ++D++ N T RE Sbjct: 61 KGKYQGYDVVIAKRIVLDLLGDENKIEFIPVEASARVEFLKANKVDVIMANFTCTKEREA 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F G I K I ++ +L + V GTT + F + Sbjct: 121 V--VDFAKPYMKVALGVIS-KDGAIKNIEELKDKELIVNKGTTADFY----FTKNYPHIK 173 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + FE+ E A + A D + L A P + + ++ K +APAI + Sbjct: 174 LLKFEQNTETFLALLKDKAIALAHDNTLLLAWAKQ--HPEFKLGITNLGDKDVIAPAIKK 231 Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255 G+ + ++ +++++ L Sbjct: 232 GNPKLLEWLNNEIDSLISSGFLK 254 >gi|326693635|ref|ZP_08230640.1| amino acid ABC transporter periplasmic protein [Leuconostoc argentinum KCTC 3773] Length = 284 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 83/257 (32%), Gaps = 18/257 (7%) Query: 5 FFVSILCLIILFFTSFS----------TNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 FV ++ + +S + T IKK + G++ V G Sbjct: 17 LFVGVVIWAAMSLSSGAKRTAQNEQQTTQTEDWARIKKAKQITIGLDDTFVPMGFRDKEG 76 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFDVD A+ + K+++ P++ + L + ID + T RE + Sbjct: 77 NIVGFDVDLATAVFKTMG---IKVKWQPIDWSMKETELNTGNIDAIWNGYTVTKAREKQV 133 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY---FKAHNMKY 171 F + Q + KK I+ S + + Q ++ + Y K + Sbjct: 134 A--FSKPYHKATQVLVTLKKNNINRFSDMKDKVLGDQTASSGDEGFNKYPKVLKQYVKDQ 191 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + ++ ++ A R D D P ++ + +A Sbjct: 192 QVVGYDTFDKAFNDLNAGRIDGLLIDEDYARYYVAHQPNPKDYTVTVGDFPIDQMAVGFR 251 Query: 232 QGDTEWYNIVSWTHYAM 248 + D + V T A Sbjct: 252 KSDNQLREAVDQTLAAF 268 >gi|146307037|ref|YP_001187502.1| cystine transporter subunit [Pseudomonas mendocina ymp] gi|145575238|gb|ABP84770.1| L-cystine-binding protein / Diaminopimelate-binding protein [Pseudomonas mendocina ymp] Length = 265 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 86/246 (34%), Gaps = 13/246 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + S+ ++ F+ S A +L DIK RG +K G+ F A+G GF+V Sbjct: 8 RRVLLGSLTLVLSSAFSLPSLAADLLDDIKARGAIKIGLEGTYPPFNYQDASGKLTGFEV 67 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + AL+ + + P AL+SK++D++ + R F Sbjct: 68 ELAEALAKELGVKAE---FQPTKWDGILAALESKRLDVVINQVTISDERRK--KYDFSTP 122 Query: 122 TYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G + K I S L+G + V GT E L D + + ++ Sbjct: 123 YTVSGIQALTRKADGDSIKSAQDLAGKKVGVGLGTNYEQWLKD----NVPQADIRTYDDD 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R D D L A ++ + + D S+ A+ +G+ + Sbjct: 179 PTKFQDLNVGRIDVILVDR--LAAFEMVDKTGGRLAVAGDAFSRQEAGIALRKGNPQLLA 236 Query: 240 IVSWTH 245 + Sbjct: 237 AIDEAL 242 >gi|116513636|ref|YP_812542.1| amino acid ABC transporter periplasmic protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116092951|gb|ABJ58104.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 270 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 95/246 (38%), Gaps = 11/246 (4%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFC 64 +L ++ S S ++S +K+ + G+ F+ + +G GF+VD Sbjct: 1 MAVLLLSLVFTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDSGKATGFEVDLA 60 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RA++ I K++ ++ K R + L+ +D + T R + F + Sbjct: 61 RAITKQILGPKGKMKIGYISEKSRIMDLKIGNVDAVMATMTNTPDRRKI--INFSDTYFM 118 Query: 125 DGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G+ I+ KK ++S+ + + G+T + + Y I ++ Sbjct: 119 AGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAPKA----RVIFYDDYGSC 174 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A +A + +A D + L L + +LPD + P I +G+ ++ V+ Sbjct: 175 YNALKAGKANAMVSDNAVLAGLISDDKDK--FKMLPDTFTVEPYGIGIKKGEDKFTAEVN 232 Query: 243 WTHYAM 248 + Sbjct: 233 QALKVL 238 >gi|291279627|ref|YP_003496462.1| polar amino acid ABC transporter substrate-binding protein [Deferribacter desulfuricans SSM1] gi|290754329|dbj|BAI80706.1| polar amino acid ABC transporter, substrate-binding protein [Deferribacter desulfuricans SSM1] Length = 266 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 98/247 (39%), Gaps = 14/247 (5%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++ + TSF+T S L + K+G LK G++T V +A NG+ G Sbjct: 1 MKFLKKLLFLMIIFAFVAQTSFATE-STLDKVLKKGVLKVGMST-FVPWAMYDKNGNLIG 58 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F++D + L+ + I+++P AL + + DI+ T R + + + Sbjct: 59 FEIDVAKRLAKDMGVK---IEFVPTKWSGIIPALLTGKFDIIIGGMSITPQRALKVNFSI 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGAS--ICVQAGTTTELTLADYFKAHNMKYHPIVF 176 K KG + +S + + I V+ GTT E+ +F +F Sbjct: 116 PYDYSGMSIVANKFKAKGWNKLSDFNKKNVIIAVRIGTTAEVASKRFFP----NAKIKLF 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R A + + ++ + D +K P+ A+ +GD + Sbjct: 172 DDESQAIQELLLGRAHAVVASAPMPAFQAIEHPD-RLYLPIKDTFTKEPIGFAVRKGDYD 230 Query: 237 WYNIVSW 243 + N ++ Sbjct: 231 FLNFLNS 237 >gi|120401719|ref|YP_951548.1| extracellular solute-binding protein [Mycobacterium vanbaalenii PYR-1] gi|119954537|gb|ABM11542.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium vanbaalenii PYR-1] Length = 332 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 54/225 (24%), Positives = 92/225 (40%), Gaps = 10/225 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + +IK RG L G++ G F+ G+ GFDVD ++ IF PS+++Y Sbjct: 85 ADKAVANIKARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIARDIFGTPSQVEYR 144 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 L++ +R ALQ Q+D++ + T R+ + F Q + + I S Sbjct: 145 ILSSADRVEALQKNQVDVVVKTMTITCERKKL--VNFSTAYLSANQRILAPRDSNIRQSS 202 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 LSG +CV GTT+ + + + A + + DA + D S L Sbjct: 203 DLSGKRVCVAKGTTSLERIQQITP----PPIIVGVVTWADCLVALQQRQVDAVSTDDSIL 258 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 L P H++ P +++ P + +T V+ T Sbjct: 259 AGLVSQ--DPYLHIVGPS-MNEEPYGIGVNLENTGLVRFVNGTLQ 300 >gi|260904718|ref|ZP_05913040.1| extracellular solute-binding protein family 3 [Brevibacterium linens BL2] Length = 299 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 101/303 (33%), Gaps = 45/303 (14%) Query: 1 MYK-DFFVSILCLIILFFTSFST-----------------------------NASILGDI 30 M K ++ + + +L + ++ Sbjct: 1 MKKLRLSIASVAIGLLALSGCGQGGTPDAPAEGDGAQAEAPEYTVNDSADFKDSKTWKAA 60 Query: 31 KKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 K G LK G+ G VKA + +GFD++ + +++ + P +I+Y + R Sbjct: 61 KDAGELKVGVKYDQPGLGNVKAGSEQPEGFDIEIAKMVAAQLGFSPDQIKYTETVSANRE 120 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 LQ ID++ R+ + F Y GQ ++ + I+ L G +C Sbjct: 121 PFLQQGNIDMVVATYTINDERKKV--VDFAGPYYVAGQDLLVAEDSDIAGPDDLDGKKVC 178 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 G+T + + + + ++ + ++ DA T D + L + Sbjct: 179 SVDGSTPAQNIEEKYDKA----ELVAYDTYSKCVTDLQSGSVDAVTTDDAILRGYAKQYE 234 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY------AMVTAEELGITQKNINQ 263 E ++ ++ P + +GD + V+ A E + + + Sbjct: 235 --GEFKVVGKPFTEEPYGVGLPKGDDAMRDAVNDALQKGMDDGDWKKAFEYTLGSADDVE 292 Query: 264 VSK 266 + + Sbjct: 293 MPE 295 >gi|111020803|ref|YP_703775.1| glutamine ABC transporter substrate-binding protein [Rhodococcus jostii RHA1] gi|110820333|gb|ABG95617.1| probable ABC glutamine transporter, substrate binding component [Rhodococcus jostii RHA1] Length = 341 Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 88/221 (39%), Gaps = 10/221 (4%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L I RG L G++ F+ G +GFDVD + ++ IF DP+++++ L Sbjct: 96 SLAAIAARGRLIVGVDQNTNLFSFRDPTTGTLQGFDVDLAKEVARDIFGDPTRVEFRLLT 155 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + RF AL++ ++D++ T T R +G F + Q ++ + I+ + L+ Sbjct: 156 SAGRFSALENNEVDVVVHATSITCERARRVG--FSTEYFRAFQRILVPQGSDITGPADLA 213 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G +C TT+ T+ + ++ + + DA + S L L Sbjct: 214 GKRVCTFVDTTSLATVQRVAP----DATILAVPDWDDCLVTMQKKQADAVSTSDSLLAGL 269 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + I+ + + +G + V+ T Sbjct: 270 ASQDRN---FRIVGPQLEAEHWGIGVNKGRDDLVRFVNGTL 307 >gi|187924805|ref|YP_001896447.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] gi|187715999|gb|ACD17223.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 324 Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 84/257 (32%), Gaps = 11/257 (4%) Query: 7 VSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + L + S L I G + G+ + F+ G G+ Sbjct: 32 LVALTTFGAASLACSAQTDELTGTLRKIHDDGVVVLGVREASIPFSYFDGKGT-VGYSQT 90 Query: 63 FC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + + K+ + + + R L + QID+ +T T+ RE AF Sbjct: 91 IALQIVEEIKKTLGMPQLKVHEITVTSSNRTPMLLNNQIDLECGSTTHTVERE--NLAAF 148 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + I K GI+ L+G ++ AGT+ E L + Sbjct: 149 SNSFFQYAVRMIARKNAGITDFQDLAGKAVVTTAGTSDERLLRRLNTDKLLNMRITSARD 208 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R A+ D +Y K T+ RP + V+ + A +GD + Sbjct: 209 HSEAFNTLKDGRAVAFVMDEPIVYGFKSTDPRPDDFVVTGTPLGYEVYACMFRKGDEPFR 268 Query: 239 NIVSWTHYAMVTAEELG 255 +V+ T+ E Sbjct: 269 TLVNGVIARGQTSGEAE 285 >gi|269796952|ref|YP_003316407.1| amino acid-binding protein [Sanguibacter keddieii DSM 10542] gi|269099137|gb|ACZ23573.1| amino acid-binding protein [Sanguibacter keddieii DSM 10542] Length = 290 Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 91/256 (35%), Gaps = 10/256 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S + + + G + G F V +G GFDV+ + ++ + P I++ Sbjct: 43 EGSTMARLAEAGTMTVGTKFDQPLFGLVGPDGTPVGFDVEIAKIIAGELGIAPDDIEWTE 102 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVS 141 + R +Q ++DI+ + + F Y GQ +++ I S Sbjct: 103 TVSANRETFIQEDRVDIVVATYTIND--DRKQVIDFAGPYYLAGQSLMVNADDDSIQSED 160 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G +C G+T + + F F + + R + D T D L Sbjct: 161 DLAGKIVCSAEGSTPAKNIEENFP----DADLRTFSQYTDCLDPLRNGQVDVLTTDNVIL 216 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT-QKN 260 + P + + + ++ P + + DT++ N ++ T A + Sbjct: 217 AGYVA--ESPDDFKLAGEQFTEEPYGIGLKKDDTDFRNFINDTLEAAYEDGRWDAAWEAT 274 Query: 261 INQVSKDTTNPDVQRF 276 +V T P V R+ Sbjct: 275 AGEVLDTPTPPAVDRY 290 >gi|229588679|ref|YP_002870798.1| glutamate/aspartate ABC transporter periplasmic binding protein [Pseudomonas fluorescens SBW25] gi|229360545|emb|CAY47402.1| glutamate/aspartate ABC transport system, periplasmic binding protein precursor [Pseudomonas fluorescens SBW25] Length = 308 Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 84/245 (34%), Gaps = 11/245 (4%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDD---- 74 + L I G + + F+ + +G G+ D A+ + D Sbjct: 23 AAELTGTLKKINDSGTITLAHRDSSIPFSYIADGSGKPVGYSHDIQLAVVEQLKKDLNKP 82 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K +Y + ++ R +Q+ D+ +T R + + F + G ++ K Sbjct: 83 DLKAKYNLVTSQTRIPLIQNGTADLECGSTTNNAER--AQQVDFTVNIFEIGTRLLVKKD 140 Query: 135 ----KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + + L G ++ AGTT+E + M + I + E + R Sbjct: 141 KDGKPSYADFADLKGKNVVTTAGTTSERIIKAMNADKQMGMNVISAKDHGESFQMLESGR 200 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A+ D + L + +P + VI S A + + D + V A+ Sbjct: 201 AVAFMMDDALLAGEEAKAKKPDDWVITGTPQSFEAYACMVRKDDPAFKKAVDDAIVALYK 260 Query: 251 AEELG 255 + E+ Sbjct: 261 SGEIN 265 >gi|296111778|ref|YP_003622160.1| amino acid ABC transporter, amino acid-binding protein [Leuconostoc kimchii IMSNU 11154] gi|295833310|gb|ADG41191.1| amino acid ABC transporter, amino acid-binding protein [Leuconostoc kimchii IMSNU 11154] Length = 284 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 89/267 (33%), Gaps = 27/267 (10%) Query: 1 MYKDFF----VSILCLIILFFTSFSTNASI---------------LGDIKKRGFLKCGIN 41 M K + ++ + I+ + + S N+ IK+ + G++ Sbjct: 4 MKKKIIVNSIIGLIVVGIVSWLAISLNSGTKNTAQNTQKATKTDDWQRIKRDKQITIGLD 63 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 V NG GFDVD A+ ++ +++ P++ + L + ID + Sbjct: 64 DTFVPMGFRDKNGKIIGFDVDLANAVFKSMG---ITVKWQPIDWSMKETELNTGNIDAIW 120 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 T R ++F + Q + KK I+ S + G + Q ++ + T Sbjct: 121 NGYTKTAARAK--QVSFSKTYHRATQVLVTLKKNNINQFSDMQGKVLGDQTASSGDETFN 178 Query: 162 DY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 ++ K + I ++ ++ A R D D P + + Sbjct: 179 EHPKVLKQYVKDQKVIGYDTFDKAFTDLNAGRIDGLLIDEDYARYYVAHQANPKNYTVTV 238 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTH 245 + A + D + V+ T Sbjct: 239 GDFAVDQTAVGFRKSDVKLRQAVNKTL 265 >gi|126667081|ref|ZP_01738056.1| putative ABC transporter periplasmic amino acid-binding protein [Marinobacter sp. ELB17] gi|126628487|gb|EAZ99109.1| putative ABC transporter periplasmic amino acid-binding protein [Marinobacter sp. ELB17] Length = 273 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 88/250 (35%), Gaps = 7/250 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + S++ L + FTS + A L + +RG L CG+ N GFD Sbjct: 1 MMRKLATSLV-LSCIAFTSVNATADQLDTVIQRGTLNCGVVLDFPPMGYFDGNNQPAGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V +C L++A+ + + + L +R +L S + D++ +T TL R S+G F Sbjct: 60 VGYCNDLAAALGVESNILN---LTWGDRIPSLISGKTDVVIGSTSDTLERAKSVG--FTY 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179 + I K K I S L + GTT E Y + + F+ Sbjct: 115 PYFVFKFQVIAPKNKNIQSFDDLKNLKVGAALGTTYETEYLAYAEKKGWGTDNYTAFKSE 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + DA + + + + + + + W + Sbjct: 175 NDAYLGLYQGKVDAVISTNTNIATKLQSAEFKDFAAGPFVPNYDDVVGLIAKRSEGAWIS 234 Query: 240 IVSWTHYAMV 249 ++ + Sbjct: 235 YLNLFLVHQI 244 >gi|289435074|ref|YP_003464946.1| amino acid ABC transporter, amino acid-binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171318|emb|CBH27860.1| amino acid ABC transporter, amino acid-binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 271 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 87/252 (34%), Gaps = 11/252 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K V+I+ +I L + ++ I+K + G++ V + + Sbjct: 1 MKKVLVVAIMAIISLTLVACGSDETKEDQWKRIEKNKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + ++ P++ + L++ ID++ T R+ +A Sbjct: 61 GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKK--KVA 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHPI 174 F + Q + K I S + ++ Q G ++ +A + P Sbjct: 116 FSNPYMKNEQVLVTLKSSNIKEFSDMKDKTLGAQNGASSIDDMAKKPEVLTDIIANNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + R D D ++ I+ + + A + + D Sbjct: 176 LYDTFDVAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFNPTDFAVGMRKSD 235 Query: 235 TEWYNIVSWTHY 246 + V+ Sbjct: 236 KKLQTKVNDAFK 247 >gi|254421935|ref|ZP_05035653.1| Bacterial extracellular solute-binding protein, family 3 [Synechococcus sp. PCC 7335] gi|196189424|gb|EDX84388.1| Bacterial extracellular solute-binding protein, family 3 [Synechococcus sp. PCC 7335] Length = 288 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 96/259 (37%), Gaps = 17/259 (6%) Query: 1 MYKDFFVSILCLIIL-----FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M + + ++ + F S + A+ L +I++RG+L + + + Sbjct: 1 MRRKLLAGVGSILGVQFLLPLFVSLNAFAAELSEIRERGYLVVAVKDNRPPMGFLNSADQ 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GF++D R L+ + D ++ +P +R A+ ++D+ T R Sbjct: 61 LSGFEIDIARKLAEDLLGDADAVELVPTRNVDRLDAVIENRVDVAIAALTITEPRRRI-- 118 Query: 116 LAFRPITYFDGQGFIMH----KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 ++F Y DG FI I ++ L +I V ++T L+ A Sbjct: 119 VSFSYPYYLDGTAFITRLPTDSAPDILTLHDLQLGTIAVLERSSTVAQLSYLLPAAQQ-- 176 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + E + DA+ GD S L + H +LPDIIS PLA + Sbjct: 177 --VGVGSYLEAQTLVESGAVDAFAGDASVLAGWTMEGGALMNHSMLPDIISAEPLAVVLP 234 Query: 232 QGD--TEWYNIVSWTHYAM 248 +G + V+ Sbjct: 235 KGQQYSPLQTAVNKAIQRW 253 >gi|300718324|ref|YP_003743127.1| extracellular solute-binding protein [Erwinia billingiae Eb661] gi|299064160|emb|CAX61280.1| extracellular solute-binding protein [Erwinia billingiae Eb661] Length = 279 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 90/250 (36%), Gaps = 13/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + + L S A L DI+ RG L C + + + F+ G Sbjct: 1 MKLKLLSCSVLALPLMMAFSSAKADALSDIQARGQLNCAVYSDVPPFSSPDPKTRQLVGM 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C AL+ + K+ +P + + R + + + D+L N +T R + F Sbjct: 61 DVDLCTALAQQMG---LKLNLMPTSIEARIAVIATGRADVLIANLAYTKTRGKQIQ--FS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + ++ K + + G I GTT+E ++ H + F+ Sbjct: 116 DPYYVAKEMLVVKKPDVDKTKADFKGKRISATKGTTSEQSI------HLAGAKAVTFQDA 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 A ++ + + + E ++ + ++ P+ + QG+ Sbjct: 170 ASAFLALEQNKAVGFVTNTMTGIKMITQAGKDGIELGMIKEPMALEPIGIGMKQGEPALL 229 Query: 239 NIVSWTHYAM 248 V+ + AM Sbjct: 230 TKVNTSLKAM 239 >gi|170748630|ref|YP_001754890.1| extracellular solute-binding protein [Methylobacterium radiotolerans JCM 2831] gi|170655152|gb|ACB24207.1| extracellular solute-binding protein family 3 [Methylobacterium radiotolerans JCM 2831] Length = 267 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 65/323 (20%), Positives = 107/323 (33%), Gaps = 66/323 (20%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK-GFDV 61 + F L +++ ++ A L I++ G L+ F V G DV Sbjct: 2 RRLFAFALAIVL---SAGPALADRLDAIRQAGVLRVAAFDSNPPFGFVDPATKRINGLDV 58 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 ++ +A++ A+ ++ P N R L S ++D++ N T R L F Sbjct: 59 EYAQAIADALGVK---LEVRPTNPANRIPLLTSGKVDLVLANFTITDERAK--QLDFSIP 113 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + GQ F+ K +SS QL+G I GTT E+ L F + F+ Sbjct: 114 YFASGQQFLAKKG-TLSSPEQLNGLRIGADKGTTNEIVLRRDFPRA----IVVAFDDTPF 168 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A R A T D L L + I IS + I +G+T ++V Sbjct: 169 AFTALRNGNVQAITQDGPKLVGLLAKVPDRENYEIPAFSISNDYIGVGIPKGETRLRDLV 228 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 + T G++ S Sbjct: 229 NETLR-------------------------------GLEASGRAAA-------------- 243 Query: 302 HMGNYGEMFDRNLGNQSELKIPR 324 ++DR G ++E +PR Sbjct: 244 -------IYDRWFGPETEQPLPR 259 >gi|84489759|ref|YP_447991.1| polar amino acid ABC transporter periplasmic substrate-binding protein [Methanosphaera stadtmanae DSM 3091] gi|84373078|gb|ABC57348.1| predicted ABC-type polar amino acid transport system, periplasmic substrate-binding protein [Methanosphaera stadtmanae DSM 3091] Length = 282 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 88/257 (34%), Gaps = 18/257 (7%) Query: 1 MYKDF--------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K ++I+ +++F +TN + + L G ++ + Sbjct: 1 MNKKIGIIAGVIVLIAIIAAVLVFTGVINTNGNTGPN---DNVLVVGFDSEFPPYGYKDD 57 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 NG++ GFD+D + + + + + P++ + L S ID + + Sbjct: 58 NGEYVGFDLDLAQEVCNR---NNWTLVKQPIDWDAKDSELSSGTIDCIWNGFTINGREDK 114 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA-DYFKAHNMKY 171 + + Q + GI+S+S L G + Q ++ L D + Sbjct: 115 ---YLWSKPYIDNKQVIVTKSNSGINSLSDLKGKQVETQKDSSALSALEGDQKPLADTFK 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + A CDA DI + PS++ IL + IS Sbjct: 172 QLVQIADYNTAFLDLDAGTCDAVAMDIGVAQYQVNSKSNPSDYKILDEEISSEQYGIGFK 231 Query: 232 QGDTEWYNIVSWTHYAM 248 +G+ + + + T M Sbjct: 232 KGNEQLRDKIQQTLDEM 248 >gi|154244135|ref|YP_001415093.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154158220|gb|ABS65436.1| extracellular solute-binding protein family 3 [Xanthobacter autotrophicus Py2] Length = 267 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 84/254 (33%), Gaps = 11/254 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + F V L + + A L +IKKR + ++ G F N G DV Sbjct: 8 RRAFLVGATGLAVAGSLALPAFADTLEEIKKRNKILIAVDLGSPPFGMTDGNMQPTGSDV 67 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + + ++ + ++ + + + R L + + D++ + T R+ + F Sbjct: 68 ESAKLFAAELG---VPLEIVQVTSPNRIPFLLTGKADMVMASFSVTDERKKV--IDFSDP 122 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 K I + L G + G++ + + F+ Sbjct: 123 YGVIQIVVAGPKNVAIRDIKDLVGKRLGTTRGSSNDKEATTQA----QGAEMVRFDDDAT 178 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + A + + + + A+ V L ++ +P A + +GD + V Sbjct: 179 LITALVSGQVNLMASSPQVMQAVNARRPNDPLEVKL--VLKTNPYAVGLRKGDDALRDAV 236 Query: 242 SWTHYAMVTAEELG 255 + A + +L Sbjct: 237 NKVIAANLKNGKLN 250 >gi|158321614|ref|YP_001514121.1| extracellular solute-binding protein [Alkaliphilus oremlandii OhILAs] gi|158141813|gb|ABW20125.1| extracellular solute-binding protein family 3 [Alkaliphilus oremlandii OhILAs] Length = 284 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 91/253 (35%), Gaps = 12/253 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K F+ +L I+L+ ++ +++ L +I++RG++ G++ G+ Sbjct: 21 KKYVFLILLMGIMLWTSACGSSSKAVSVDLKEIEERGYVVMGLDDTFAPMGFRNNAGELV 80 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D + + S + ++++ + + L S ID++ + R+ + Sbjct: 81 GFDIDLAKEVFSRV---DIEVRFQQIEWSMKETELNSGNIDLIWNGYSISDERKE--KVD 135 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK--AHNMKYHPIV 175 F + Q + I + L G + VQ G+T + Y ++ Sbjct: 136 FTKPYLENKQIIVTLADTKIEARDDLKGKKVAVQNGSTAYDAVMAYPDLVEEFSGGELVL 195 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ E A R +A D L L + + + + + Sbjct: 196 FDTNNEAFMDLEAGRTEAVVADE-VLARYYLKGRGEEKFKVAEEDFGDEEYGIGVRKTSK 254 Query: 236 EWYNIVSWTHYAM 248 E +V T M Sbjct: 255 ELLELVENTLDEM 267 >gi|257892422|ref|ZP_05672075.1| extracellular solute-binding protein [Enterococcus faecium 1,231,408] gi|294614008|ref|ZP_06693938.1| glutamine-binding protein [Enterococcus faecium E1636] gi|257828801|gb|EEV55408.1| extracellular solute-binding protein [Enterococcus faecium 1,231,408] gi|291593115|gb|EFF24694.1| glutamine-binding protein [Enterococcus faecium E1636] Length = 244 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 47/226 (20%), Positives = 91/226 (40%), Gaps = 11/226 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 N IL K + G+ F + + +GFDVD +A++ I D K ++ Sbjct: 2 ANEDILERSKSTNEIIWGVKYDTRLFGMMDIESRTVQGFDVDIAKAITKKILGDNGKTEF 61 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + +K R L++ ID + T R+ + F + + GQ ++ K I SV Sbjct: 62 VEVTSKTRIPLLKNGNIDAIIATMTITDERKK--QVDFSDVYFDAGQALLVKKGSQIKSV 119 Query: 141 SQLSGASIC-VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+ ++ G+T+ + + + E E A ++ + DA T D + Sbjct: 120 DDLNASTTVLAVKGSTSAANIRQHAP----DAKILELENYAEAFTALQSGQGDAMTTDNA 175 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L + ++ P E+ ++ + P AI +G + V+ Sbjct: 176 ILLGIA--DENP-EYELVGGTFTNEPYGIAINKGQENFLKAVNQAL 218 >gi|170734967|ref|YP_001774081.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|169821005|gb|ACA95586.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 313 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 97/241 (40%), Gaps = 6/241 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75 + + L ++ G + G + F+ + A G+ ++ C+AL ++I + Sbjct: 38 APAQLTGTLAKVRGSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVASIEDAINQS 97 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 I+++P+ + R A+ S ++D+ +T L R+ + F PI + G ++ + Sbjct: 98 LTIRWVPVTSDNRIDAVVSGKVDLECGSTTSNLERQKRVA--FSPIFFVAGTKVMVKRGA 155 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L+G + V AGTT E L D + V + A DA+ Sbjct: 156 PIRSFRDLAGKKVAVTAGTTNEKALRDLNDKFRLGVQLQVVPDHAQGFALVANGGADAFA 215 Query: 196 GDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D LY L + ++ ++ D +S P + D + +V T + E+ Sbjct: 216 TDDVLLYGLIAENASKGGQYDVVGDFLSYDPYGIMFRKDDPQLAQVVKTTFQELAADGEI 275 Query: 255 G 255 Sbjct: 276 A 276 >gi|310827295|ref|YP_003959652.1| hypothetical protein ELI_1703 [Eubacterium limosum KIST612] gi|308739029|gb|ADO36689.1| hypothetical protein ELI_1703 [Eubacterium limosum KIST612] Length = 279 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 90/254 (35%), Gaps = 15/254 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K F V L +++F + + + D G L ++ + Sbjct: 1 MKKKFLVLSLAFMLVFSVTLAGCSGNGKGDSASNDDPIADGTLSVAVDDTYLPMEFRDDQ 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFDVD +A+ + + + + F L +KQ D + +T T R Sbjct: 61 NNLVGFDVDLAKAIGEDLGVK---VDFTTVAWDGIFNGLNAKQYDAIISSTSITPER--Q 115 Query: 114 LGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 G +G + K + + +L+G ++ VQ TT + + Sbjct: 116 EGFNQTNPYVSNGIVIVSRKDATPVKTFEELAGKTVGVQLDTTADNGAQKLKEQTGTNVE 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++ + + AA + + D A+ +P + ++++ P+A + + Sbjct: 176 IKQYDGMLDAFAALEGKQINNVMTD--VGVAMYYVAQKPELFEVTSEVLTNEPIAVTVRK 233 Query: 233 GDTEWYNIVSWTHY 246 G+ + ++ T Sbjct: 234 GEDAFTEKLNETLK 247 >gi|254777189|ref|ZP_05218705.1| extracellular solute-binding protein, family protein 3 [Mycobacterium avium subsp. avium ATCC 25291] Length = 326 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 10/237 (4%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALS 68 L + F + + + + DI+ RG L G++ G F+ G+ GFDVD ++ Sbjct: 66 LTASLRPFPTKAEADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIA 125 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 IF PS ++Y L++ ER ALQ ++D++ + T + + F + Q Sbjct: 126 RDIFGAPSHVEYRILSSDERVTALQRGEVDVVVKTMTITC--DRRKQVNFSTVYLDANQR 183 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + + I+ VS LSG +CV GTT+ + + + + A + Sbjct: 184 ILAPRDSPITKVSDLSGKRVCVAKGTTSLHRIRQI----DPPPIVVSVVNWADCLVAMQQ 239 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 DA + D S L L + P H++ P+ ++ P I +T V+ T Sbjct: 240 REIDAVSTDDSILAGL--VEEDPYLHIVGPN-MATQPYGIGINLNNTGLVRFVNGTL 293 >gi|226359784|ref|YP_002777562.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4] gi|226238269|dbj|BAH48617.1| putative ABC transporter substrate-binding protein [Rhodococcus opacus B4] Length = 340 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 89/220 (40%), Gaps = 9/220 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +I RG L G++ F+ G +GFD+D + ++ IF DP+K+++ L + Sbjct: 95 LAEIASRGRLIVGVDQNTNPFSFRDPTTGTLQGFDIDVAKEITKDIFGDPAKVEFRLLTS 154 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 RF AL+ +D++ T T R +G F + Q ++ + I+ + L+G Sbjct: 155 AGRFSALEQNDVDVVVHATAITCERARRVG--FSTEYFRAFQRILVPRGSDITGPADLAG 212 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 +C TT+ T+ + ++ + + DA + + L L Sbjct: 213 KRVCTFVDTTSLPTVQRVAPEA----TIVAVPDWDDCLVTMQKRQADATSTSDALLAGLV 268 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 P ++ P + + A+ + + V+ T Sbjct: 269 SQ--DPHFQIVGPPMEGEEHWGLAVNKYKDDLIRFVNGTL 306 >gi|224437618|ref|ZP_03658571.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Helicobacter cinaedi CCUG 18818] gi|313144069|ref|ZP_07806262.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818] gi|313129100|gb|EFR46717.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818] Length = 258 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 97/247 (39%), Gaps = 11/247 (4%) Query: 1 MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-W 56 M K ++L + NA +L DIKKRG + G+ + FA + Sbjct: 1 MKLGFKGMLKIAGLFLVLGIFALQANAGMLEDIKKRGEIVVGVKNDVPCFALLDQKTKEI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GF+VD + L+ +I D KI+ + +NAK R L + ID + T R+ + Sbjct: 61 QGFEVDVAKLLAKSILGDEKKIKLVAVNAKTRGPLLDNGSIDAVIATFTITPERKRT--Y 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y D G ++ K+KG S++ + +I V T++ + K + F Sbjct: 119 NFSQAYYKDAVGLLVLKEKGYKSIADMKNTTIGVAQAATSKKAIDAAAKKLGVNVKFNEF 178 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 I AA A R DA+ D S L ILPD + D E Sbjct: 179 PDYPSIKAALDAKRVDAFGVDKSILLGYVDDKS-----EILPDSFEPQEYGIVSPKKDKE 233 Query: 237 WYNIVSW 243 + + Sbjct: 234 FATFIDK 240 >gi|118465451|ref|YP_883877.1| extracellular solute-binding protein, family protein 3 [Mycobacterium avium 104] gi|118166738|gb|ABK67635.1| Bacterial extracellular solute-binding protein, family protein 3 [Mycobacterium avium 104] Length = 334 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 10/237 (4%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALS 68 L + F + + + + DI+ RG L G++ G F+ G+ GFDVD ++ Sbjct: 74 LTASLRPFPTKAEADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIA 133 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 IF PS ++Y L++ ER ALQ ++D++ + T + + F + Q Sbjct: 134 RDIFGAPSHVEYRILSSDERVTALQRGEVDVVVKTMTITC--DRRKQVNFSTVYLDANQR 191 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + + I+ VS LSG +CV GTT+ + + + + A + Sbjct: 192 ILAPRDSPITKVSDLSGKRVCVAKGTTSLHRIRQI----DPPPIVVSVVNWADCLVAMQQ 247 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 DA + D S L L + P H++ P+ ++ P I +T V+ T Sbjct: 248 REIDAVSTDDSILAGL--VEEDPYLHIVGPN-MATQPYGIGINLNNTGLVRFVNGTL 301 >gi|41409992|ref|NP_962828.1| GlnH [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398825|gb|AAS06444.1| GlnH [Mycobacterium avium subsp. paratuberculosis K-10] Length = 309 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 10/237 (4%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALS 68 L + F + + + + DI+ RG L G++ G F+ G+ GFDVD ++ Sbjct: 49 LTASLRPFPTKAEADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIA 108 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 IF PS ++Y L++ ER ALQ ++D++ + T + + F + Q Sbjct: 109 RDIFGAPSHVEYRILSSDERVTALQRGEVDVVVKTMTITC--DRRKQVNFSTVYLDANQR 166 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + + I+ VS LSG +CV GTT+ + + + + A + Sbjct: 167 ILAPRDSPITKVSDLSGKRVCVAKGTTSLHRIRQI----DPPPIVVSVVNWADCLVAMQQ 222 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 DA + D S L L + P H++ P+ ++ P I +T V+ T Sbjct: 223 REIDAVSTDDSILAGL--VEEDPYLHIVGPN-MATQPYGIGINLNNTGLVRFVNGTL 276 >gi|327534390|gb|AEA93224.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis OG1RF] Length = 277 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 89/252 (35%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSIL--CLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +++L C +L F +N I + + G++ V +G Sbjct: 2 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGK 61 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD +A+ + + P++ + LQ++ ID++ T R Sbjct: 62 IVGFDVDLAKAVFKLYG---ISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAE--K 116 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 + F + Q + K+K I++ S + G + VQ G++ D K Sbjct: 117 VQFTQPYMTNDQVLVSLKEKNIATASAMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQT 176 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ E ++ R D D D + I A + + Sbjct: 177 PILYDGFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRK 236 Query: 233 GDTEWYNIVSWT 244 D + ++ Sbjct: 237 SDNQLVQKINTA 248 >gi|239816574|ref|YP_002945484.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239803151|gb|ACS20218.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 304 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 42/243 (17%), Positives = 92/243 (37%), Gaps = 6/243 (2%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-- 74 + + L IK G + G GF+ + N G+ ++ C + A+ + Sbjct: 26 VAAQAQENDTLSKIKASGAITFGYRESSFGFSYLDGNLKPVGYSIEICNRIVEAVKSELK 85 Query: 75 --PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +I+Y + + R +Q+ +DI +T + R+ + F P + ++ Sbjct: 86 LPAIEIKYQAVTSANRIPLVQNGTVDIECGSTTNLVERQKQVA--FSPDIFRYNVRMLVK 143 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 GI S++ L G ++ GTT+ L + K N++ + + + + + R Sbjct: 144 ADSGIRSIADLQGKTVATTTGTTSFRLLREADKGRNLEVNNLGGKDHSDSFLLVESGRAQ 203 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A+ D L P + +I + + + + D + +V M+ + Sbjct: 204 AFVLDDILLAGQIANARNPKDFIITGESLRTENQSLMFRKDDPAFKALVDRVVSGMMKSG 263 Query: 253 ELG 255 E+ Sbjct: 264 EME 266 >gi|17549361|ref|NP_522701.1| substrate-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17431614|emb|CAD18291.1| probable substrate-binding periplasmic (pbp) abc transporter protein [Ralstonia solanacearum GMI1000] Length = 298 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 89/240 (37%), Gaps = 6/240 (2%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----P 75 ++ L IK G ++ V F+ + ANG G+ +D C L AI D+ Sbjct: 22 AVASSPTLDHIKATGAIRLAHRESSVPFSYLDANGKPIGYSMDLCMRLVDAIRDNLKRPD 81 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K+QYL + R A+ S + D+ +T RE +AF Y ++ Sbjct: 82 LKVQYLQVTPATRMDAIMSGKADLECAST--NNARERREKVAFTIPHYIANGRMLVKTAS 139 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 GI + L G ++ G+ + +A + + E A + A+ Sbjct: 140 GIHQLEDLRGKTVVSTRGSANGNLVRQLSEAGGLGITVVEAGDHGESFAMLAEGKAQAFA 199 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D L +K P+++ I+ P A + + D E+ ++ ++ E Sbjct: 200 MDDVLLAGMKANAKNPADYAIVGKTQQVVPYAIMLSKNDPEFKKLIDAAMSRLMEDGEAE 259 >gi|28377714|ref|NP_784606.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum WCFS1] gi|28270547|emb|CAD63451.1| glutamine ABC transporter, substrate binding protein [Lactobacillus plantarum WCFS1] Length = 278 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 89/256 (34%), Gaps = 17/256 (6%) Query: 1 MYK--DFFVSI--LCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M K ++ L ++++ T+ +L + K + G+ F + Sbjct: 1 MKKLKRLIGALGMLAMLVVVLTACGSRQSLAKQDVLTNDKASKTITWGVKADTKLFGLMD 60 Query: 52 -ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + KGFD D AL+ + + +++ + ++ R L++ ID + T R Sbjct: 61 VKDNQIKGFDADIATALTKRVLGKNATAKFVQVTSQTRIPLLKNGNIDAILATMTITPER 120 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 E + F + GQ ++ K I SV L + T + K K Sbjct: 121 EK--QVDFTNSYFDAGQSLLVKKGSAIKSVKDL--NKSGTKVLGVTGANSVENIKKAAPK 176 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + A ++ + A T D LY + N + ++ +K P A+ Sbjct: 177 AKVLELSDYAQAMTALKSGQGVALTTDNGILYGMASQNPG---YEVVGGTFTKEPYGIAV 233 Query: 231 IQGDTEWYNIVSWTHY 246 +G ++ Sbjct: 234 NKGQEPLKKALNKALK 249 >gi|313890250|ref|ZP_07823884.1| major cell-binding factor [Streptococcus pseudoporcinus SPIN 20026] gi|313121355|gb|EFR44460.1| major cell-binding factor [Streptococcus pseudoporcinus SPIN 20026] Length = 272 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 105/257 (40%), Gaps = 20/257 (7%) Query: 2 YKDFFVSILCLIILFFTSFST---------NASILGDIKKRGFLKCGINTGLVGFAEVKA 52 K +S+L L + + N+S + IKK G L+ G+ + F Sbjct: 5 RKWILLSLLAFFCLSQLTLPSVKATENKWVNSSAIKKIKKSGILRIGVKQDVPNFGYYSP 64 Query: 53 N-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 N G ++G +VD + ++ ++ P + + A+ R L + Q+DI+ T E Sbjct: 65 NSGQYEGMEVDIAKKIAKSLKVKP---VFTAVTAQTREALLDNGQLDIIIATYTITP--E 119 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 +F Y D GF+++ + I+S+ L+ A+I V G+TT+ + +Y + + + Sbjct: 120 RQANYSFSKPYYRDEIGFLVNTSQKIASIKDLNHATIGVAQGSTTKAAIEEYARNKKLTF 179 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + E+ + A R A++ D S L + IL D ++ A Sbjct: 180 KFVQLGSYPELAISLYAKRIKAFSVDKSILTGYVSKQSQ-----ILSDGFNQQSYGIASS 234 Query: 232 QGDTEWYNIVSWTHYAM 248 + + N ++ Sbjct: 235 KANQNLTNYINELITKW 251 >gi|218507985|ref|ZP_03505863.1| polar amino acid ABC transport substrate-binding protein, aapJ-2 [Rhizobium etli Brasil 5] Length = 189 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 64/171 (37%), Positives = 95/171 (55%), Gaps = 1/171 (0%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 L IK+RG +K G+ GF + G W+GF VDF RAL+ +F+D K+++ Sbjct: 20 AGQTLDKIKERGVIKVGV-GTTPGFFTPDSTGRWQGFFVDFGRALAVTVFNDDDKVEFTN 78 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++R ALQ+ + DIL T+ R LG F P+ ++DGQG ++ K G++ + Sbjct: 79 SSPQQRLPALQAGEFDILLSGVTETITRAFKLGFHFGPVVFYDGQGLLVRKDLGVAKGEE 138 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 L GA+I VQ+GTT EL +AD+F+ K+ PI E E A R DA Sbjct: 139 LDGATIGVQSGTTGELNIADFFRKTGKKFTPITIEETSEFTKALDTGRVDA 189 >gi|322376867|ref|ZP_08051360.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M334] gi|321282674|gb|EFX59681.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M334] Length = 279 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 91/250 (36%), Gaps = 13/250 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K + ++ L+ LF T+ + AS +++G + G + V + NG + Sbjct: 4 KKIALVLVSLLTLFLTACTQKASDPKQDNWDKYQEQGTITIGFDNTFVPMGFEEKNGQYT 63 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+S + K+Q+ P++ + LQ+ ID + T R +A Sbjct: 64 GFDIDLAQAVSEKLG---FKVQFQPIDWDMKETELQNGTIDAIWNGYSATDER--REKVA 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 F + Q + K + I SV + ++ QAG++ L D K Sbjct: 119 FSIPYMENQQVLVAKKSQQIRSVEDMKDKTLGAQAGSSGYLDFEAQPDLLKNRVKDQKAN 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 ++ E + R DA D + +++ + A + D Sbjct: 179 QYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILNDYNVFSAGFESESFAVGVRPAD 238 Query: 235 TEWYNIVSWT 244 ++ Sbjct: 239 KRLLQALNQA 248 >gi|159184745|ref|NP_354406.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|159140033|gb|AAK87191.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 267 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 88/252 (34%), Gaps = 9/252 (3%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + + + FT FS NA + DI KRG +K G+ G F V A G+ G+D D Sbjct: 8 KSVAAAIAVCAGIFTGFSANAQSVDDIVKRGSVKIGVLVGAPPFGSVDAQGNPVGYDADV 67 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + + + + L R AL+S ++D L T R + F Sbjct: 68 ATLIGKYLG---VPVTMVQLTPPSRIPALESGKVDFLVATLAPTPERAK--AVMFTNPYS 122 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G HK I L G ++ V G++ E + K + F+ Sbjct: 123 AFQVGIYSHKDTKIEKWEDLKGMTVGVNRGSSVEREFVNREKELG--LTILRFDDDATTM 180 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A + + A G + A R + S P + + + + + ++ Sbjct: 181 QALFSGQVQAIAGPDAQ--ANAAIKLRGDTTTEVKFFFSIQPNSMTVRKDAVDLHQWLNN 238 Query: 244 THYAMVTAEELG 255 T Y + EL Sbjct: 239 TIYYIKQNGELD 250 >gi|172037710|ref|YP_001804211.1| extracellular solute-binding protein [Cyanothece sp. ATCC 51142] gi|171699164|gb|ACB52145.1| extracellular solute-binding protein, family 3 [Cyanothece sp. ATCC 51142] Length = 300 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 103/256 (40%), Gaps = 11/256 (4%) Query: 1 MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F + L L+++ + S S IL IK+ G + G + FA V G+W G+ Sbjct: 2 MKKKFVLLALTLLLMATSQSPSWAGEILEKIKQTGVITAGTRKDAIPFAYVNEEGEWVGY 61 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D + I P +++ + + + RF +++++IDI ++ +T R+ + Sbjct: 62 SIDVLEIIRQDIEKKLGKPIQLKLVEVTPQNRFDKVKNREIDIECASSTFTWERDEV--V 119 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G K + ++ L+G I V TT E + A + Sbjct: 120 DFSVSYFASGTKIFRKKGSDLGTIDSLAGRRIGVIPNTTNEQAIKLQQPAA----ILVPI 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235 + E +A GD L L+L N + ++P+ A I + ++ Sbjct: 176 KDRTEGLEKLNNGEIEAIAGDGIVLQGLRLENGNADKFEVVPEFPYMYEAYACMIPEDES 235 Query: 236 EWYNIVSWTHYAMVTA 251 W +V+++ + Sbjct: 236 AWRGMVNYSLVKFMEG 251 >gi|163789690|ref|ZP_02184127.1| glutamine ABC transporter (glutamine-binding protein) [Carnobacterium sp. AT7] gi|159874912|gb|EDP68979.1| glutamine ABC transporter (glutamine-binding protein) [Carnobacterium sp. AT7] Length = 266 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 96/235 (40%), Gaps = 14/235 (5%) Query: 17 FTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 S +A+ + I++ + G+ F +G+ +GFD+D +A++ I Sbjct: 21 AACGSQSAATVDITERIEENPTITWGVKVDTNLFGLYDIKSGEIRGFDIDIAKAITEEIT 80 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 D + +++ + +K R L++ ID + T R+ + F I + GQ ++ Sbjct: 81 GDEANAEFVEVTSKTRIPLLKNGNIDAIIATMTITEERKE--QVNFSDIYFDAGQALLVP 138 Query: 133 KKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 I S+ LS ++ G+T+ + + + + + E E A ++ + Sbjct: 139 NDSSIQSLEDLSADTTVLAVKGSTSAQNI----RELSPDTNVLELENYSEAFTALQSGQG 194 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 DA T D + L + D P + + ++ P AI +G ++ V+ Sbjct: 195 DAVTTDNAILLGIIA--DNPG-YRLAGGNFTQEPYGIAINKGQDDFLTEVNEALT 246 >gi|315442241|ref|YP_004075120.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] gi|315260544|gb|ADT97285.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] Length = 323 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 10/231 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75 F + + + +IK RG L G++ G F+ G+ GFDVD ++ IF P Sbjct: 70 FATQEEADAAVANIKARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIARDIFGTP 129 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 S+++Y L++ +R AL+ Q+D++ + T R+ + F Q + + Sbjct: 130 SQVEYRILSSADRVDALRDNQVDVVVKTMTITCERKKL--VNFSTAYLIANQRILAPRDS 187 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S LSG +CV GTT+ + + + A + + DA + Sbjct: 188 NIRQSSDLSGKRVCVAKGTTSLERIQQISP----PPLIVGVVTWADCLVALQQRQVDAVS 243 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 D + L L P H++ P +++ P + +T V+ T Sbjct: 244 TDDAILAGLVSQ--DPYLHIVGPS-MNEEPYGIGVNLQNTGLVRYVNGTLQ 291 >gi|145220806|ref|YP_001131484.1| extracellular solute-binding protein [Mycobacterium gilvum PYR-GCK] gi|145213292|gb|ABP42696.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium gilvum PYR-GCK] Length = 324 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 10/231 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75 F + + + +IK RG L G++ G F+ G+ GFDVD ++ IF P Sbjct: 71 FATQEEADAAVANIKARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIARDIFGTP 130 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 S+++Y L++ +R AL+ Q+D++ + T R+ + F Q + + Sbjct: 131 SQVEYRILSSADRVDALRDNQVDVVVKTMTITCERKKL--VNFSTAYLIANQRILAPRDS 188 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S LSG +CV GTT+ + + + A + + DA + Sbjct: 189 NIRQSSDLSGKRVCVAKGTTSLERIQQISP----PPLIVGVVTWADCLVALQQRQVDAVS 244 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 D + L L P H++ P +++ P + +T V+ T Sbjct: 245 TDDAILAGLVSQ--DPYLHIVGPS-MNEEPYGIGVNLQNTGLVRYVNGTLQ 292 >gi|332163540|ref|YP_004300117.1| putative periplasmic solute-binding protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667770|gb|ADZ44414.1| putative periplasmic solute-binding protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 269 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 62/318 (19%), Positives = 103/318 (32%), Gaps = 65/318 (20%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSS 69 L L S + +A L DIKK G ++ + F + G+DVD A++ Sbjct: 1 MLASLATLSGAAHADKLDDIKKEGVVRIAVFDSNPPFGYIDPHTKKLVGYDVDVANAIAK 60 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + ++ N R L SK++D+++ N T R + F + GQ F Sbjct: 61 DLGVK---VELRATNPANRIPLLTSKKVDLIAANFTITDDRAK--EVNFSLPYFATGQKF 115 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 I HK + + + I GT E+TL D + I ++ A R Sbjct: 116 IAHKG-VLKTPEDIGKLRIGADKGTVQEITLRDRYPTAK----VISYDDTPVAFTALRNG 170 Query: 190 RCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 A T D + L L + I P I+K I +G+ V+ T Sbjct: 171 NVQAITQDDAKLVGLLGNLPEAQKADFEISPFSITKEYQGIGIPKGEDRLTAEVNET--- 227 Query: 248 MVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYG 307 + ++K + Sbjct: 228 ----------------------------LVKLEKDGEAAK-------------------- 239 Query: 308 EMFDRNLGNQSELKIPRG 325 ++DR G +++ PRG Sbjct: 240 -IYDRWFGPETKAAQPRG 256 >gi|207724820|ref|YP_002255217.1| substrate-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|206590045|emb|CAQ37006.1| substrate-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] Length = 280 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 90/243 (37%), Gaps = 6/243 (2%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-- 74 + ++ L IK G ++ V F+ + A G G+ +D C L AI ++ Sbjct: 1 MMNAVASSPTLDRIKATGAIRLAHRESSVPFSYLDAGGKPIGYSMDLCMRLVDAIRENLK 60 Query: 75 --PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 K+QYL + R A+ + + D+ +T RE +AF Y ++ Sbjct: 61 RPDLKVQYLQVTPATRMDAIMNGKADLECAST--NNARERREKVAFTIPHYIANGRMLVK 118 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 GI + L G ++ G+ + +A + + + A + Sbjct: 119 TASGIQKLEDLRGKTVVSTRGSANGDLVRQLSEAGGLGITVVEASDHAQSFAMLADGKAQ 178 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A+ D L +K T P+++ I+ P A + + D E+ ++ ++ Sbjct: 179 AFAMDDVLLAGMKATAKNPADYAIVGKTQQVVPYAIMLSKNDPEFKKLIDAAMSRLMEDG 238 Query: 253 ELG 255 E Sbjct: 239 EAE 241 >gi|124027566|ref|YP_001012886.1| glutamine-binding periplasmic protein precursor [Hyperthermus butylicus DSM 5456] gi|123978260|gb|ABM80541.1| glutamine-binding periplasmic protein precursor [Hyperthermus butylicus DSM 5456] Length = 269 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 78/221 (35%), Gaps = 8/221 (3%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 + L G + F + NG GFD++ R ++ D I+ ++ AL Sbjct: 36 KKILVVGTSPDFPPFEYIAKNGSVVGFDIELIRLVAKKAGYD--DIEIRTMDFDALIPAL 93 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICV 150 + QID+++ T R+ + F + Q ++ SV +LSG ++ V Sbjct: 94 EQGQIDVIAAGMTITEERK--QRVDFTIPYWQVDQAILVRADSEFRPKSVEELSGKTVGV 151 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q GTT L + + + + A R DA D + Sbjct: 152 QTGTTAADYLNKIVEEKGLNINIKEYSSYVLAVNDLIAGRIDAVMVDTPVAKMFEKQYKD 211 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 + + A+ +G+TE + ++ ++ + Sbjct: 212 KLVISAVIETG--EKYGFAVRKGNTELLDKLNKALEDIMNS 250 >gi|238854965|ref|ZP_04645295.1| glutamine-binding protein [Lactobacillus jensenii 269-3] gi|260664250|ref|ZP_05865103.1| amino acid ABC transporter periplasmic protein [Lactobacillus jensenii SJ-7A-US] gi|282931676|ref|ZP_06337169.1| glutamine-binding protein [Lactobacillus jensenii 208-1] gi|313472445|ref|ZP_07812937.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Lactobacillus jensenii 1153] gi|238832755|gb|EEQ25062.1| glutamine-binding protein [Lactobacillus jensenii 269-3] gi|239530142|gb|EEQ69143.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Lactobacillus jensenii 1153] gi|260562136|gb|EEX28105.1| amino acid ABC transporter periplasmic protein [Lactobacillus jensenii SJ-7A-US] gi|281304287|gb|EFA96396.1| glutamine-binding protein [Lactobacillus jensenii 208-1] Length = 275 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 94/254 (37%), Gaps = 18/254 (7%) Query: 1 MY---KDFFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVK-AN 53 M + F S L++L ++ S ++ IK + G+ F + Sbjct: 1 MKNFYRWIFASFSLLVLLTLSACQNKSKSSDTYEKIKTSQAITWGVKADTRLFGIMNIKT 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 +GF++D + LS + K+ + AK + L++ +D L T R+ Sbjct: 61 SQLEGFEIDLAKELSKKMLGKNIKVNLVQTTAKTKIPLLRNGSVDALLSTMTITKERKKI 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKY 171 + F + GQ ++ + I +V L +G ++ GTT + + Sbjct: 121 --VDFSTPYFNAGQAILVPQNSKIRNVYDLNKNGITVLAVKGTTAVANIRKFAPKA---- 174 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ + +A +A + A T D L + + P I+ + P A+ Sbjct: 175 SVSEYDDYGQAFSALKAGQGQALTSDNGILAGIAA--ENPG-FKIVGGTFTSEPYGIAVR 231 Query: 232 QGDTEWYNIVSWTH 245 +GDT+ ++ Sbjct: 232 KGDTKLRKKINQAL 245 >gi|325970438|ref|YP_004246629.1| ABC transporter periplasmic protein [Spirochaeta sp. Buddy] gi|324025676|gb|ADY12435.1| ABC-type transporter, periplasmic subunit family 3 [Spirochaeta sp. Buddy] Length = 265 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 8/234 (3%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAI 71 + T S + L +K +G+L G + F G+ +GF++D +A++ I Sbjct: 20 LFAAGTKESAVSDPLAALKAKGYLSVGCKVDVPSFGYKNINTGEIEGFEIDLAKAVAKRI 79 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 F D + I+ P+ AK R L + ++D+++ T R F I Y D ++ Sbjct: 80 FGDENAIKLTPVTAKTRGPLLDTGELDMVAATFTVTEERRK--SWDFSTIYYVDAVAVMV 137 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 K + S L+G +I V TT+ +L + F EI A + R Sbjct: 138 KKASPYAVFSDLAGKTIGVAQSATTKKSLEAGAAEAGITLKFNEFATYPEIKVALDSGRV 197 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 DA++ D + L + + +L + +K A+ +G+T V+ T Sbjct: 198 DAFSVDFAILNGYMEDSTK-----LLTERFAKQDYGIAVKKGNTALLEAVNATI 246 >gi|256618703|ref|ZP_05475549.1| extracellular solute-binding protein [Enterococcus faecalis ATCC 4200] gi|256598230|gb|EEU17406.1| extracellular solute-binding protein [Enterococcus faecalis ATCC 4200] Length = 275 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 97/272 (35%), Gaps = 28/272 (10%) Query: 1 MYK--DFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGL 44 M K + + L++ ++ S + +KK G +K G+ + Sbjct: 1 MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTVTVEQLKKAGKIKVGVKEDI 60 Query: 45 VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F + + +G + D R + I ++++ + AK R L + ++D++ Sbjct: 61 PNFGYMNPDTNKNEGMEPDIARLIVKEITGSEENVEFVGVTAKTRGPLLDNGELDMVIAT 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + F Y D GF++ K+ SS+ L G +I V TT+ L Sbjct: 121 FTITDERKKT--YNFTTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 178 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + +K+ E+ A + R DA++ D S L I D S Sbjct: 179 AQEEGIKFTYQELGSYPELKTALTSKRIDAFSVDKSILSGYVDGKT-----EISKDGFSP 233 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + +TE + ++ E Sbjct: 234 QEYGITTKKANTEL----NDYLNGLIEKWEKD 261 >gi|296167869|ref|ZP_06850052.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896994|gb|EFG76617.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 326 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 10/237 (4%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALS 68 L + F + + + + DI+ RG L G++ G F+ G+ GFDVD ++ Sbjct: 66 LTASLRPFPTKAQADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEIA 125 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 IF PS ++Y L++ ER ALQ ++D++ + T R + F + Q Sbjct: 126 RDIFGAPSHVEYRILSSDERVTALQRSEVDVVVKTMTITCERRK--QVNFSTVYLDANQR 183 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + + I+ V LSG +CV GTT+ + + + + A + Sbjct: 184 ILAPRDSPITKVGDLSGKRVCVAKGTTSLHRIRQI----DPPPVIVSVVNWADCLVAMQQ 239 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 DA + D S L L + P H++ P+ ++ P I +T V+ T Sbjct: 240 REIDAVSTDDSILAGL--VEEDPYLHIVGPN-MATQPYGIGINLTNTGLVRFVNGTL 293 >gi|293375607|ref|ZP_06621881.1| bacterial extracellular solute-binding protein, family 3 [Turicibacter sanguinis PC909] gi|292645824|gb|EFF63860.1| bacterial extracellular solute-binding protein, family 3 [Turicibacter sanguinis PC909] Length = 279 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 105/250 (42%), Gaps = 18/250 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-------LGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K F + L+ L ++ + +I++ G + G+ + F V +N Sbjct: 1 MKKVFLCFMSFLLTLGVLGACGESNTSQSEARSIEEIQESGKIIIGVFSDKKPFGYVDSN 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 GD++G+DV F ++ + + ++Y+P+ A R L S ++DI+ N T R+ Sbjct: 61 GDYQGYDVYFGNRIAQDLGVE---VEYVPVEAASRVEYLVSNKVDIILANFTVTEERKE- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F G + I+ V QL+G ++ V GTT E F + + Sbjct: 117 -KVDFTLPYMKVALGVVSPDDALITDVEQLNGKTLIVSKGTTAETY----FTENYPNVNL 171 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + F++ E A R DA + D + + A + V + + S +A A+ +G Sbjct: 172 LKFDQYSEAYNALLDGRGDALSTDNTEVLAWA--LENEGFSVGVESLGSIDTIAAAVQKG 229 Query: 234 DTEWYNIVSW 243 + E ++ Sbjct: 230 NDELLEWLNN 239 >gi|15599390|ref|NP_252884.1| binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|9950406|gb|AAG07582.1|AE004836_1 probable binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] Length = 276 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 98/262 (37%), Gaps = 15/262 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + L + S + +A L DI+K+G + G + + G+ Sbjct: 1 MKIRLLGAALAAVFTLIGS-AAHADDLADIRKKGEIVIGTLGTDEPNSFIDPKTRQIIGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VD ++ AI P + ++ R LQ +D+L+ + RE + F Sbjct: 60 EVDLGTEIAKAIGVKP---VFKQISVAARIPELQQGHVDLLAASLTHNKEREAL--VDFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 GQ ++ K G +S+ L G + G T E + + FE Sbjct: 115 YSIIVTGQKALVKKNAGFASLHDLDGKKVLTVKGGTQEPNIRKALP----NAQVVTFETS 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++ A + + A+ D SAL + ILP+ +S LA A +G+ + Sbjct: 171 QQALLALQQGKGQAFVDDESALVNDFGKLGAAAGGYAILPENLSTEALAIAFRKGNPQLK 230 Query: 239 NIVSWTHYAMV---TAEELGIT 257 +V T + AE+L + Sbjct: 231 QLVDSTLAGLERSGAAEQLYLK 252 >gi|11497847|ref|NP_069069.1| glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) [Archaeoglobus fulgidus DSM 4304] gi|2650410|gb|AAB91001.1| glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) [Archaeoglobus fulgidus DSM 4304] Length = 264 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 81/257 (31%), Gaps = 14/257 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIK----KRGFLKCGINTGLVGFAEVKAN-GD 55 M K + +L +L + + G+L G + F G+ Sbjct: 1 MKKVVPILVLLAALLLLGCTQQAEQKEEKAQIKLVEPGYLTVGSDIAYPPFEFTDEKTGE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D + ++ + + +++ L + + D++ T R Sbjct: 61 YAGFDIDLMKEIAKRMGLEA---KFVNTAWDGIIPGLLAHKYDVICSAMTITEERAK--Q 115 Query: 116 LAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F + Q I I V L+G + VQ GTT + ++ Sbjct: 116 VDFSDPYFEAKQVIITRADETDIQDVEDLNGKVVAVQQGTTGDFAAQRLKDEKGIQLEIK 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQG 233 FE E A + DA D A + P + I+ D + A+ + Sbjct: 176 RFEGTPEALMAVQKGDADAAIIDN--FVAYIAAKENPGLYRIVESDEFAPEYYGIAVNKD 233 Query: 234 DTEWYNIVSWTHYAMVT 250 + ++ + Sbjct: 234 NPALLEKINEVLKEIKE 250 >gi|300811388|ref|ZP_07091884.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497623|gb|EFK32649.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 281 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 95/247 (38%), Gaps = 11/247 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDF 63 F +L ++ S S ++S +K+ + G+ F+ + + GF+VD Sbjct: 11 FMAVLLLSLVFTACSHSQSSSTYDRVKQTNTITWGMRADTRLFSMMDVDSSKATGFEVDL 70 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 RA++ I K++ ++ K R + L+ +D + T R + F + Sbjct: 71 ARAVTKQILGPKGKMKIEYISEKSRIMDLKIGNVDAVMATMTNTPDRRKI--INFSDTYF 128 Query: 124 FDGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G+ I+ KK ++S+ + + G+T + + Y I ++ Sbjct: 129 MAGETLIVPKKSKLNSIKDFNNSKYSIAAVKGSTADSDVHKYAPKA----RVIFYDDYGS 184 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A +A + +A D + L L + +LPD + P I +G+ ++ V Sbjct: 185 CYNALKAGKTNAMVSDNAVLAGLISDDKDK--FKMLPDTFTVEPYGIGIKKGEDKFTAEV 242 Query: 242 SWTHYAM 248 + + Sbjct: 243 NQALKVL 249 >gi|218460738|ref|ZP_03500829.1| putative substrate-binding component of ABC transporter [Rhizobium etli Kim 5] Length = 279 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 101/258 (39%), Gaps = 6/258 (2%) Query: 1 MYKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M F ++ L+ + S S L ++ RG L G + + A+ +G Sbjct: 1 MTISFRAGVISLVAVALLSTPVLAEGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD R ++ A+F DP KI+Y+ ++ R + + ++DI + T R + +AF Sbjct: 61 FDVDMGRIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAF 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y +G G ++ S + L A V + A + +E Sbjct: 119 TIPYYREGVGLMLKADGKYSDYAALKTAGSSVTISVLQNVYAEAMVHAALPEATVDQYES 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 V+ I A + R DA D S+L P + + A A+ +GD +W Sbjct: 179 VDLIYQALESGRADAAATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWL 236 Query: 239 NIVSWTHYAMVTAEELGI 256 N V+ + +T E Sbjct: 237 NFVNTALHEAMTGVEFDF 254 >gi|323721082|gb|EGB30144.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis CDC1551A] Length = 329 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 10/230 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75 F + + + + DI+ RG L G++ G F+ G+ GFDVD ++ IF P Sbjct: 76 FATKAEADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEVARDIFGVP 135 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 S ++Y L+A ER ALQ Q+DI+ + T R + F + Q + + Sbjct: 136 SHVEYRILSAAERVTALQKSQVDIVVKTMSITCERRKL--VNFSTVYLDANQRILAPRDS 193 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ VS LSG +CV GTT+ + + + + A + DA + Sbjct: 194 PITKVSDLSGKRVCVARGTTSLRRIREIAP----PPVIVSVVNWADCLVALQQREIDAVS 249 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D + L L + P H++ PD ++ P I +T V+ T Sbjct: 250 TDDTILAGL--VEEDPYLHIVGPD-MADQPYGVGINLDNTGLVRFVNGTL 296 >gi|308369386|ref|ZP_07666727.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu002] gi|308370400|ref|ZP_07666925.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu003] gi|308372885|ref|ZP_07667473.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu005] gi|308375151|ref|ZP_07442886.2| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu007] gi|308327701|gb|EFP16552.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu002] gi|308332063|gb|EFP20914.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu003] gi|308339455|gb|EFP28306.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu005] gi|308347232|gb|EFP36083.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu007] Length = 308 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 10/230 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75 F + + + + DI+ RG L G++ G F+ G+ GFDVD ++ IF P Sbjct: 55 FATKAEADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEVARDIFGVP 114 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 S ++Y L+A ER ALQ Q+DI+ + T R + F + Q + + Sbjct: 115 SHVEYRILSAAERVTALQKSQVDIVVKTMSITCERRKL--VNFSTVYLDANQRILAPRDS 172 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ VS LSG +CV GTT+ + + + + A + DA + Sbjct: 173 PITKVSDLSGKRVCVARGTTSLRRIREIAP----PPVIVSVVNWADCLVALQQREIDAVS 228 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D + L L + P H++ PD ++ P I +T V+ T Sbjct: 229 TDDTILAGL--VEEDPYLHIVGPD-MADQPYGVGINLDNTGLVRFVNGTL 275 >gi|289744107|ref|ZP_06503485.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis 02_1987] gi|289684635|gb|EFD52123.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis 02_1987] Length = 337 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 10/230 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75 F + + + + DI+ RG L G++ G F+ G+ GFDVD ++ IF P Sbjct: 84 FATKAEADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEVARDIFGVP 143 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 S ++Y L+A ER ALQ Q+DI+ + T R + F + Q + + Sbjct: 144 SHVEYRILSAAERVTALQKSQVDIVVKTMSITCERRKL--VNFSTVYLDANQRILAPRDS 201 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ VS LSG +CV GTT+ + + + + A + DA + Sbjct: 202 PITKVSDLSGKRVCVARGTTSLRRIREIAP----PPVIVSVVNWADCLVALQQREIDAVS 257 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D + L L + P H++ PD ++ P I +T V+ T Sbjct: 258 TDDTILAGL--VEEDPYLHIVGPD-MADQPYGVGINLDNTGLVRFVNGTL 304 >gi|215402161|ref|ZP_03414342.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis 02_1987] Length = 329 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 10/230 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75 F + + + + DI+ RG L G++ G F+ G+ GFDVD ++ IF P Sbjct: 76 FATKAEADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEVARDIFGVP 135 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 S ++Y L+A ER ALQ Q+DI+ + T R + F + Q + + Sbjct: 136 SHVEYRILSAAERVTALQKSQVDIVVKTMSITCERRKL--VNFSTVYLDANQRILAPRDS 193 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ VS LSG +CV GTT+ + + + + A + DA + Sbjct: 194 PITKVSDLSGKRVCVARGTTSLRRIREIAP----PPVIVSVVNWADCLVALQQREIDAVS 249 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D + L L + P H++ PD ++ P I +T V+ T Sbjct: 250 TDDTILAGL--VEEDPYLHIVGPD-MADQPYGVGINLDNTGLVRFVNGTL 296 >gi|15607552|ref|NP_214925.1| glutamine-binding lipoprotein [Mycobacterium tuberculosis H37Rv] gi|15839797|ref|NP_334834.1| amino acid ABC transporter, amino acid-binding protein [Mycobacterium tuberculosis CDC1551] gi|31791589|ref|NP_854082.1| glutamine-binding lipoprotein [Mycobacterium bovis AF2122/97] gi|121636325|ref|YP_976548.1| putative glutamine-binding lipoprotein glnH [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660176|ref|YP_001281699.1| amino acid ABC transporter substrate-binding protein [Mycobacterium tuberculosis H37Ra] gi|148821607|ref|YP_001286361.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis F11] gi|167970774|ref|ZP_02553051.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis H37Ra] gi|215409923|ref|ZP_03418731.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis 94_M4241A] gi|215429231|ref|ZP_03427150.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis EAS054] gi|215444497|ref|ZP_03431249.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T85] gi|218752041|ref|ZP_03530837.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis GM 1503] gi|219556230|ref|ZP_03535306.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T17] gi|224988797|ref|YP_002643484.1| putative glutamine-binding lipoprotein [Mycobacterium bovis BCG str. Tokyo 172] gi|253797334|ref|YP_003030335.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN 1435] gi|254363375|ref|ZP_04979421.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis str. Haarlem] gi|254549356|ref|ZP_05139803.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185276|ref|ZP_05762750.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis CPHL_A] gi|260199407|ref|ZP_05766898.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T46] gi|260203559|ref|ZP_05771050.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis K85] gi|289441790|ref|ZP_06431534.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T46] gi|289445950|ref|ZP_06435694.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis CPHL_A] gi|289552660|ref|ZP_06441870.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN 605] gi|289568326|ref|ZP_06448553.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T17] gi|289572996|ref|ZP_06453223.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis K85] gi|289752440|ref|ZP_06511818.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis EAS054] gi|289756480|ref|ZP_06515858.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T85] gi|289760527|ref|ZP_06519905.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis GM 1503] gi|294995916|ref|ZP_06801607.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis 210] gi|297632893|ref|ZP_06950673.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN 4207] gi|297729868|ref|ZP_06958986.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN R506] gi|298523887|ref|ZP_07011296.1| amino acid ABC transporter, amino acid-binding protein [Mycobacterium tuberculosis 94_M4241A] gi|306774505|ref|ZP_07412842.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu001] gi|306787410|ref|ZP_07425732.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu004] gi|306796149|ref|ZP_07434451.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu006] gi|306966414|ref|ZP_07479075.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu009] gi|306970609|ref|ZP_07483270.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu010] gi|307078335|ref|ZP_07487505.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu011] gi|307082893|ref|ZP_07492006.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu012] gi|313657197|ref|ZP_07814077.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN V2475] gi|1817677|emb|CAB06581.1| PROBABLE GLUTAMINE-BINDING LIPOPROTEIN GLNH (GLNBP) [Mycobacterium tuberculosis H37Rv] gi|13879927|gb|AAK44648.1| amino acid ABC transporter, amino acid-binding protein [Mycobacterium tuberculosis CDC1551] gi|31617175|emb|CAD93282.1| PROBABLE GLUTAMINE-BINDING LIPOPROTEIN GLNH (GLNBP) [Mycobacterium bovis AF2122/97] gi|121491972|emb|CAL70435.1| Probable glutamine-binding lipoprotein glnH [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|134148889|gb|EBA40934.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis str. Haarlem] gi|148504328|gb|ABQ72137.1| amino acid ABC transporter substrate-binding protein [Mycobacterium tuberculosis H37Ra] gi|148720134|gb|ABR04759.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis F11] gi|224771910|dbj|BAH24716.1| putative glutamine-binding lipoprotein [Mycobacterium bovis BCG str. Tokyo 172] gi|253318837|gb|ACT23440.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN 1435] gi|289414709|gb|EFD11949.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T46] gi|289418908|gb|EFD16109.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis CPHL_A] gi|289437292|gb|EFD19785.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN 605] gi|289537427|gb|EFD42005.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis K85] gi|289542079|gb|EFD45728.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T17] gi|289693027|gb|EFD60456.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis EAS054] gi|289708033|gb|EFD72049.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis GM 1503] gi|289712044|gb|EFD76056.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis T85] gi|298493681|gb|EFI28975.1| amino acid ABC transporter, amino acid-binding protein [Mycobacterium tuberculosis 94_M4241A] gi|308216857|gb|EFO76256.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu001] gi|308335878|gb|EFP24729.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu004] gi|308343320|gb|EFP32171.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu006] gi|308355813|gb|EFP44664.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu009] gi|308359733|gb|EFP48584.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu010] gi|308363675|gb|EFP52526.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu011] gi|308367326|gb|EFP56177.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis SUMu012] gi|326902236|gb|EGE49169.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis W-148] gi|328457121|gb|AEB02544.1| glutamine-binding lipoprotein glnH [Mycobacterium tuberculosis KZN 4207] Length = 328 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 10/230 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75 F + + + + DI+ RG L G++ G F+ G+ GFDVD ++ IF P Sbjct: 75 FATKAEADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIAGEVARDIFGVP 134 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 S ++Y L+A ER ALQ Q+DI+ + T R + F + Q + + Sbjct: 135 SHVEYRILSAAERVTALQKSQVDIVVKTMSITCERRKL--VNFSTVYLDANQRILAPRDS 192 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ VS LSG +CV GTT+ + + + + A + DA + Sbjct: 193 PITKVSDLSGKRVCVARGTTSLRRIREIAP----PPVIVSVVNWADCLVALQQREIDAVS 248 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D + L L + P H++ PD ++ P I +T V+ T Sbjct: 249 TDDTILAGL--VEEDPYLHIVGPD-MADQPYGVGINLDNTGLVRFVNGTL 295 >gi|167587289|ref|ZP_02379677.1| ABC polar amino acid transporter, periplasmic ligand binding protein [Burkholderia ubonensis Bu] Length = 264 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 91/258 (35%), Gaps = 20/258 (7%) Query: 1 MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K V+ L + F + + A +L ++K+RG L+ G+ F G+ Sbjct: 1 MKIALLKKLLVAGL-IGASFTAATAHAADLLDEVKQRGTLRVGLEGTFPPFNSKSPQGEL 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD +A+++ + P ++ LQ+ + D+++ T R+ + L Sbjct: 60 VGFDVDIAKAVAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIANQVGITDKRKET--L 114 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F P + I K S+ L G + V GT Sbjct: 115 DFSPAYTYSSAQLIQRKDDTRQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVK 169 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E A R DA D L L + P ++ S +P +G+ Sbjct: 170 TYPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGN 227 Query: 235 TEWYNIVSWTHYAMVTAE 252 ++ + A + A+ Sbjct: 228 PKFQKAIGDAM-AQLEAD 244 >gi|116050137|ref|YP_791046.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|115585358|gb|ABJ11373.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] Length = 268 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 95/246 (38%), Gaps = 14/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M K + + + L S A L DI+K G L+ F V A +G Sbjct: 1 MKK---LPAITALALALISGLAQADRLEDIRKAGVLRVASFDSNPPFGFVDAKSKQIEGL 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + ++Q LP N R L + ++D++ N T RE + + F Sbjct: 58 DVDYAKALADKLG---VRLQVLPTNPANRIPLLTANKVDLVLANFTIT--RERAQQVDFS 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI+ K ++S L+ + V GT E L + F I ++ Sbjct: 113 IPYFSSGQQFIVKKG-TLTSPEVLNKWRVGVDKGTVNEGVLREKFP----GAKVIAYDDT 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R + A T D L L ++ + P IS + I +G+ Sbjct: 168 PFAFTALRNGQVQAITQDGPKLIGLLANVPDRDKYEVPPFTISNDLIGVGIPKGEKSLTE 227 Query: 240 IVSWTH 245 V + Sbjct: 228 FVDKSL 233 >gi|317049447|ref|YP_004117095.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316951064|gb|ADU70539.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 274 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 61/232 (26%), Positives = 94/232 (40%), Gaps = 12/232 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 T+A L DIK RG L G+ + + NG+ GF++ R +++ + P KI+ + Sbjct: 22 THADTLSDIKARGVLTVGVKNDYPPYGYMDNNGNTVGFEISLARYIANELLGSPDKIKLV 81 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF-DGQGFIMHKKKGISSV 140 P+NA R L S QIDI+ T R + F G + K + Sbjct: 82 PVNASNRMQFLNSGQIDIIMATLGVTPDRAK--QIDFTDEYVSAAGPSILARKAVKFTQW 139 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 QL G IC G+ T+ + + F + E A + +RC A D + Sbjct: 140 EQLKGQKICGIQGSYFNKTVTE-----KYGLQLVNFTALPEAYRALQDNRCVAMVFDDMS 194 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 L KL S++ I P+A + +GD + V A+V AE Sbjct: 195 LQ-NKLKEPGWSDYKIAVKPYEYLPMAGGLRKGDDAFRAAVDK---AIVKAE 242 >gi|72383932|ref|YP_293286.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72123275|gb|AAZ65429.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 289 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 93/241 (38%), Gaps = 6/241 (2%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDD 74 + +A L + G + V F+ + GF VD A+ + Sbjct: 11 AAAGVHAETLEKVAATGRITVAYREAAVPFSYLLGPHKAVGFSVDLTEAIVDDVRSRLKQ 70 Query: 75 PS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 P K++Y+P+ + R L + D+ +T T +R + F ++ G + + Sbjct: 71 PDLKVEYIPVTGQNRIPLLVNGTYDLECGSTTNTSMRGKEVA--FSINFFYAGTRLLTKR 128 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 GI+ + L+ ++ AG+T E + + +N+ I + + R A Sbjct: 129 DSGINGYADLAKKTVASTAGSTNEKVVRKHGADNNIDVQMISGKDYADALQLVENDRASA 188 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 D L+ L+ + PS I+ D + P A + + D E+ +V T ++ + E Sbjct: 189 LALDDVLLFGLRANSRNPSSLEIVGDTLQVEPYACMVRKDDAEFKKLVDGTITRLMKSGE 248 Query: 254 L 254 Sbjct: 249 F 249 >gi|227546810|ref|ZP_03976859.1| ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|312132398|ref|YP_003999737.1| hisj2 [Bifidobacterium longum subsp. longum BBMN68] gi|322691558|ref|YP_004221128.1| amino acid ABC transporter substrate-binding protein [Bifidobacterium longum subsp. longum JCM 1217] gi|227212772|gb|EEI80653.1| ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|311772697|gb|ADQ02185.1| HisJ2 [Bifidobacterium longum subsp. longum BBMN68] gi|320456414|dbj|BAJ67036.1| amino acid ABC transporter substrate binding component [Bifidobacterium longum subsp. longum JCM 1217] Length = 300 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 11/228 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 +S + A L +IKK G +K + + F V +G ++G+DV F L+ + DP Sbjct: 45 TSSSANAKARSLDEIKKSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAEQLAKDLGVDP 104 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 Y ++ R L S ++D++ N T R+ + F G + + Sbjct: 105 E---YTSVDPAARVDVLTSNKVDLVLANFTVTDERKE--KVDFAKPYMKVALGVVSPESA 159 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ VSQL G ++ + GTT E +F+ + +++ + A R DA++ Sbjct: 160 QITDVSQLDGKTLIIAKGTTAET----WFEKNAPNVKLQKYDQYADAYNALLDGRGDAFS 215 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 D + + A V + + +APA+ +G+TE N V+ Sbjct: 216 TDNTEVLAWA--KSNKGFKVGITHLGDDDTIAPAVQKGNTELLNFVND 261 >gi|300694154|ref|YP_003750127.1| substrate-binding periplasmic (pbp) ABC transporter protein [Ralstonia solanacearum PSI07] gi|299076191|emb|CBJ35504.1| putative substrate-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum PSI07] Length = 296 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 88/240 (36%), Gaps = 6/240 (2%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFDDP 75 ++ L IK G ++ V F+ + ANG G+ +D C A+ ++ Sbjct: 20 AVASSPTLDRIKATGTVRLAHRENSVPFSYLDANGKPIGYSMDLCMRLVDAIRESLKRPD 79 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K+QYL + R A+ S + D+ +T RE +AF Y ++ Sbjct: 80 LKVQYLQVTPATRMDAIMSGRADLECAST--NNARERREKVAFTIPHYIANGRMLVKTAS 137 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 GI + L G ++ G+ + +A + + E A + A+ Sbjct: 138 GIRQLEDLRGKTVVSTRGSANGDLVRQLSEAGGLGITVVEASDHGESFAMVAEGKAQAFA 197 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D L +K P+++ I+ P A + + D E+ ++ ++ E Sbjct: 198 MDDVLLAGIKANAKNPADYAIVGKTQQVVPYAIMLSKNDPEFKKLIDAAMARVMEDGEAE 257 >gi|238063458|ref|ZP_04608167.1| glutamate binding protein [Micromonospora sp. ATCC 39149] gi|237885269|gb|EEP74097.1| glutamate binding protein [Micromonospora sp. ATCC 39149] Length = 326 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 83/231 (35%), Gaps = 7/231 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + + IK G + G+ A G GFD++ + ++S + DP+KI Sbjct: 73 ANVAGSPTFDKIKSSGKVTVGVKFDQPNLGYKDAQGKRCGFDIEIAQYVASTLGVDPAKI 132 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y + + R A++ +ID T R ++F + GQ ++ K + Sbjct: 133 EYKEIASANRETAIKGGEIDYYVGTYSITDKR--KNDISFAGPYFIAGQDLLVRKDETTI 190 Query: 139 SVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + L G +C G+T + D + + + F+ E + + DA T D Sbjct: 191 TGKDTLKGKKVCSATGSTPIQKVRD--EGLTEPENIVEFKTYSECVSQLLDKKVDAVTTD 248 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + L P E + S + + D + V+ A Sbjct: 249 DAILKGYAAQ--NPDELKVAGQPFSTEKYGIGLPKDDKALRDYVNDQIEAA 297 >gi|241113591|ref|YP_002973426.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861799|gb|ACS59465.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 279 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 98/250 (39%), Gaps = 4/250 (1%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V L + L T + S L ++ RG L G + + A+ +GFDVD Sbjct: 9 VMSLAVAALLSTPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQGFDVDMGHI 68 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ A+F DP KI+Y+ ++ R + + ++DI + T R + +AF Y +G Sbjct: 69 IAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAFTIPYYREG 126 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 G ++ + + L A V + A + ++ V+ I A Sbjct: 127 VGLMLKADGKYADYAALKAAGSSVTISVLQNVYAEAMVHAALPEATVDQYDSVDLIYQAL 186 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + R DA D S+L P + + A A+ +GD +W N V+ + Sbjct: 187 ESGRADAVATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWLNFVNTALH 244 Query: 247 AMVTAEELGI 256 +T E Sbjct: 245 EAMTGVEFDF 254 >gi|301801478|emb|CBW34170.1| putative glutamine-binding protein precursor [Streptococcus pneumoniae INV200] Length = 254 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 11/241 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKIV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ F Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K + + + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + +TE + + Sbjct: 176 AHRIDAFSVDRSILSGYTSKRT-----ELLDDSFKPSDYGIVTKKSNTELNDYLDTLVTK 230 Query: 248 M 248 Sbjct: 231 W 231 >gi|209518146|ref|ZP_03266975.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209501450|gb|EEA01477.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 266 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 82/250 (32%), Gaps = 14/250 (5%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + L L L FT+ + +A +L +K+ G LK G+ F +G+ +G Sbjct: 1 MKLSKLLIGALALFALGFTAVAAHAEDLLDSVKQAGVLKIGLEGTYPPFDSRNKDGELEG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD +A+++ + P ++P ALQS + D++ T R+ L F Sbjct: 61 FDVDVAKAVAAKLGVKPE---FIPTEWSGIIAALQSGKFDVIINQVTITPQRK--QVLDF 115 Query: 119 RPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + I S+ + G T D + + Sbjct: 116 SQPYTYSAAQLIQRADDKREFKSLDEFKGDKKLGVTLGTNY----DQMARAVPGINVQTY 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E A R DA D L + + P + + + + + + Sbjct: 172 PGAPEKLRDLAAKRIDATIDDRLMLPYIIKNSQLPLRTGAVLKGADQE-MGIPFRKDNPK 230 Query: 237 WYNIVSWTHY 246 + + Sbjct: 231 FAKALDDALT 240 >gi|300705482|ref|YP_003747085.1| amino-acid ABC transporter binding protein ybej [Ralstonia solanacearum CFBP2957] gi|299073146|emb|CBJ44504.1| Amino-acid ABC transporter binding protein ybeJ [Ralstonia solanacearum CFBP2957] Length = 299 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 92/252 (36%), Gaps = 7/252 (2%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + + + + L I+ G ++ V F+ G G+ +D C Sbjct: 10 LAVLAVPLAVSAVHAMASTPTLDRIRDTGTIRLAYREDSVPFSYTDG-GKPIGYSIDICS 68 Query: 66 ALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + A + K+QY+P+ A R + S + D+ +T + +AF Sbjct: 69 RVVDAIRTSLKRPELKVQYVPVTAANRMDTIASGKADLECGST--NNAPDRREKVAFTIP 126 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y ++ G+ L G ++ G++ + A M + ++ Sbjct: 127 HYITKGRMLVKASSGLQQWEDLHGKTVVAARGSSAADVMHKLNDATGMGMRTVDTNDLKT 186 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + + DA+ GD L ++ T+D P+++V+ S A + + D ++ ++ Sbjct: 187 AFSMLSTGKADAFAGDDVLLAGMRATSDNPTDYVVAGKTQLVSSYAMMMSKQDADFKKLI 246 Query: 242 SWTHYAMVTAEE 253 + ++ E Sbjct: 247 DQSMTRLIVDGE 258 >gi|118468998|ref|YP_885192.1| extracellular solute-binding protein, family protein 3 [Mycobacterium smegmatis str. MC2 155] gi|118170285|gb|ABK71181.1| Bacterial extracellular solute-binding protein, family protein 3 [Mycobacterium smegmatis str. MC2 155] Length = 322 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 61/298 (20%), Positives = 102/298 (34%), Gaps = 62/298 (20%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL--------------------------------- 27 M + + + L + S A L Sbjct: 1 MKRLLMLLVSTLTAMSLVGCSQAAPALNLPSLTLAPPTPAGMEEIPPQPVRLPEIDNDDC 60 Query: 28 -------------------GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRAL 67 +I+ RG L G++ G F+ G GFDVD + Sbjct: 61 NRTASLRPFSNKEEAEAAVANIRARGRLIVGLDIGSNLFSFRDPITGQITGFDVDIAGEV 120 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 S IF PSK++Y L++ +R AL++ Q+DI+ + T R+ + F + Q Sbjct: 121 SRDIFGTPSKVEYRILSSADRITALRNNQVDIVVKTMTITCERKKL--VNFSTVYLMANQ 178 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + + IS S LSG +CV GTT+ + + + + A + Sbjct: 179 RILASRDSNISQASDLSGRRVCVVDGTTSLQRIQQISPS----PIIVSVVTWADCLVALQ 234 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + DA + D S L L P H++ P + P + +T +V+ T Sbjct: 235 QRQADAVSTDDSILAGLVAQ--DPYLHIVGPSLSQ-EPYGIGVNLENTGLVRVVNGTL 289 >gi|225858444|ref|YP_002739954.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae 70585] gi|225720039|gb|ACO15893.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae 70585] Length = 254 Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 11/241 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ F Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K + + + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + +TE + + Sbjct: 176 AHRIDAFSVDRSILSGYTNKRT-----ALLDDSFKPSDYGIVTKKSNTELNDYLDNLVTK 230 Query: 248 M 248 Sbjct: 231 W 231 >gi|111225073|ref|YP_715867.1| putative glutamate ABC transporter glutamate binding protein [Frankia alni ACN14a] gi|111152605|emb|CAJ64346.1| putative glutamate binding protein of ABC transporter system [Frankia alni ACN14a] Length = 330 Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 87/238 (36%), Gaps = 9/238 (3%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 + + + + G + G F +G +GFDV+ ++ A+ Sbjct: 69 AAPTGAAASFAPGTTMARLHDAGKITVGTKFDQNLFGLKNLSGKPEGFDVEIAEIITDAL 128 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 K+ ++ + R +Q ++D++ R+ + F Y GQ ++ Sbjct: 129 GIPRDKVNFVETVSANREPFIQQGRVDMVVATYTINDKRKKV--VDFAGPYYVAGQSIMV 186 Query: 132 -HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 K I+ L+G +C +G+T + A ++F+ + A + + Sbjct: 187 AKKNTDITGKDSLAGKKVCSVSGSTPAENIRKVAPAA----QLVLFDVYSKCADALKNGQ 242 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 DA T D L L + P ++ +K P I +GDT + ++ T A Sbjct: 243 VDAVTTDNVILLGLI--DKDPDAFKLVGGTFTKEPYGIGIKKGDTAFRTFINDTLEAS 298 >gi|169631301|ref|YP_001704950.1| glutamine-binding protein GlnH [Mycobacterium abscessus ATCC 19977] gi|169243268|emb|CAM64296.1| Probable glutamine-binding protein GlnH [Mycobacterium abscessus] Length = 327 Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 10/226 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + N + I+KRG L G++ G F+ G+ GFDVD +S IF P +++ Sbjct: 78 AANDEAVAAIRKRGRLVVGLDIGSNLFSFRDPITGELTGFDVDIAGEVSRDIFGTPERVE 137 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y L++ +R AL++ +DI+ + T R + F + + Q + + GI++ Sbjct: 138 YRILSSADRVAALKNSTVDIVVKTMTITCARRK--EVNFSSVYLMNYQRILTSRDSGITN 195 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 LSG +C GTT+ L+ + + A + + DA + D S Sbjct: 196 AQDLSGRRVCAARGTTSLNRLSQITP----PPVIMSVVTWADCLVALQQRQVDAVSTDDS 251 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L L P H+I P+ +S P I +T+ V+ T Sbjct: 252 ILAGLMSQ--DPYLHIIGPN-MSDEPYGIGIKLENTDLVRYVNRTL 294 >gi|291166920|gb|EFE28966.1| amino acid ABC transporter, amino acid-binding protein [Filifactor alocis ATCC 35896] Length = 260 Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 92/261 (35%), Gaps = 14/261 (5%) Query: 1 MYKDFFVSILC--LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + V L L + S S G+ + G++ ++G+ G Sbjct: 1 MKQKNIVLFLVGILFLFSLCSCSNKQPSQGNNSETSNYVIGLDDTFAPMGFRDSSGELVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D + ++ + + ++ + L +K ID++ + R+ +AF Sbjct: 61 FDIDLAKEIARR---KNFTVTFQSIDWAMKENELNAKNIDMIWNGYSISEERK--QKVAF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 D Q I K I+++ L G I +QA +T + + + Sbjct: 116 STPYVEDKQLVITMKDSPITTIEDLKGKVISLQAESTAIDAVNQNPTISTSLAKIVEYPS 175 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E+ + RCDA D L + + E IL + ++ +A I + DTE Sbjct: 176 NNEVFQDLQTGRCDAIVVDE-ILARYYMKQNASQEFRILEEALATEYMAVGIRKEDTELL 234 Query: 239 NIVSWTHYAMVTAEELGITQK 259 ++ EEL Sbjct: 235 QAINDGL------EELKADGT 249 >gi|170017620|ref|YP_001728539.1| amino acid ABC transporter periplasmic protein [Leuconostoc citreum KM20] gi|169804477|gb|ACA83095.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Leuconostoc citreum KM20] Length = 283 Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 83/267 (31%), Gaps = 26/267 (9%) Query: 1 MYKDFFV-SILCLIILFF-----------------TSFSTNASILGDIKKRGFLKCGINT 42 M + V +++ L L T + IK+ + G++ Sbjct: 4 MKRKIIVNTLVGLAFLAIVIWAILSLGVGNKQNKDTQATAQKDDWQRIKQEKQITIGLDD 63 Query: 43 GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 V G+ GFDVD A+ ++ K+++ P++ + L + ID + Sbjct: 64 TFVPMGFRNKEGNIVGFDVDLANAVFKSM---DIKVKWQPIDWSMKETELNTGNIDAIWN 120 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA- 161 T R + F + Q + KK I+ S + G + Q ++ + Sbjct: 121 GYTKTTARAKQVA--FSDTYHRATQVLVTLKKNNINRFSDMKGKVLGDQTASSGDEGFNK 178 Query: 162 --DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 D K + + ++ ++ A R D D P ++ + Sbjct: 179 YPDVLKQYVKDQKVVGYDTFDKAFNDLNAGRIDGLLIDEDYARYYVAHQPNPKDYTVTVG 238 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHY 246 A + D + V+ Sbjct: 239 AFPVDMTAVGFRKSDNKLREAVNKALT 265 >gi|71733635|ref|YP_274850.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298487226|ref|ZP_07005275.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71554188|gb|AAZ33399.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298158250|gb|EFH99321.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330985341|gb|EGH83444.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 283 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 97/252 (38%), Gaps = 4/252 (1%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + L + + S L + KRG L G + + A+G +GFD+D Sbjct: 9 KACAFVLAASFTLANAAQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDID 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R ++ +F+DPSK++++ ++ R L + ++DI + T R + +AF Sbjct: 69 IGRIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPY 126 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y +G ++ + L A V + + K ++ V+ + Sbjct: 127 YREGVALLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + R D D S+ L P + S A A+ +GD +W N V+ Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVN 244 Query: 243 WTHYAMVTAEEL 254 + +T E Sbjct: 245 TALHEAMTGVEF 256 >gi|289627186|ref|ZP_06460140.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648680|ref|ZP_06480023.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330868023|gb|EGH02732.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 283 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 98/252 (38%), Gaps = 4/252 (1%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + L ++ + S L + KRG L G + + A+G +GFD+D Sbjct: 9 KACAFVLAASFTLANSAQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDID 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R ++ +F+DPSK++++ ++ R L + ++DI + T R + +AF Sbjct: 69 IGRIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPY 126 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y +G ++ + L A V + + K ++ V+ + Sbjct: 127 YREGVALLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + R D D S+ L P + S A A+ +GD +W N V+ Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVN 244 Query: 243 WTHYAMVTAEEL 254 + +T E Sbjct: 245 TALHEAMTGVEF 256 >gi|116248747|ref|YP_764588.1| putative substrate-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115253397|emb|CAK11785.1| putative substrate-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 279 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 97/250 (38%), Gaps = 4/250 (1%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V L + L T S L ++ RG L G + + A+ +GFDVD Sbjct: 9 VMSLAVAALLSTPALAEGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQGFDVDMGHI 68 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ A+F DP KI+Y+ ++ R + + ++DI + T R + +AF Y +G Sbjct: 69 IAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAFTIPYYREG 126 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 G ++ + + L A V + A + ++ V+ I A Sbjct: 127 VGLMLKADGKYADYAALKAAGSSVTISVLQNVYAEAMVHAALPEATVDQYDSVDLIYQAL 186 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + R DA D S+L P + + A A+ +GD +W N V+ + Sbjct: 187 ESGRADAVATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWLNFVNTALH 244 Query: 247 AMVTAEELGI 256 +T E Sbjct: 245 EAMTGVEFDF 254 >gi|325836784|ref|ZP_08166251.1| ABC transporter, substrate-binding protein, family 3 [Turicibacter sp. HGF1] gi|325491162|gb|EGC93451.1| ABC transporter, substrate-binding protein, family 3 [Turicibacter sp. HGF1] Length = 279 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 106/250 (42%), Gaps = 18/250 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-------LGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K F + L+ L ++ + +I++ G + G+ + F V +N Sbjct: 1 MKKVFLCFMSFLLTLGILGACGESNTSQSEARSIEEIQESGKIIIGVFSDKKPFGYVDSN 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 GD++G+DV F ++ + + ++Y+P+ A R L S ++DI+ N T R+ Sbjct: 61 GDYQGYDVYFGNRIAQDLGVE---VEYVPVEAASRVEYLVSNKVDIILANFTVTEERKE- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F G + I+ V QL+G ++ V GTT E F + + Sbjct: 117 -KVDFTLPYMKVALGVVSPDDALITDVEQLNGKTLIVSKGTTAETY----FTENYPNVNL 171 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + F++ E A R DA + D + + A + V + + S +A A+ +G Sbjct: 172 LKFDQYSEAYNALLDGRGDALSTDNTEVLAWA--LENQGFSVGVESLGSIDTIAAAVQKG 229 Query: 234 DTEWYNIVSW 243 + E + ++ Sbjct: 230 NDELLDWLNN 239 >gi|229817228|ref|ZP_04447510.1| hypothetical protein BIFANG_02488 [Bifidobacterium angulatum DSM 20098] gi|229785017|gb|EEP21131.1| hypothetical protein BIFANG_02488 [Bifidobacterium angulatum DSM 20098] Length = 275 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 90/251 (35%), Gaps = 15/251 (5%) Query: 1 MYKDFFVSILCLIILFFTS--FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K +F L + + + S + G ++ GI G +G + G Sbjct: 1 MKKTWFKRALAALCALTCAVSLAGCGSS----QSDGKIRIGIKFDQPGLGFK-KSGTYVG 55 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + ++ + +I + +K+R LQ+ +D + T R+ + F Sbjct: 56 FDVDVAKYIAKKLGYTEDEIVWKEAPSKQREAMLQNGDVDFIIATYSITDERKKV--VDF 113 Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + GQ ++ K + L+G +C G+T+ +T+ + F + + Sbjct: 114 AGPYFVAGQDLLVRKGDTSVRGPEDLNGKRLCSVTGSTSAVTVKEKFA---NEVQLMEQP 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E A + DA T D L L + ++ ++ + +G + Sbjct: 171 GYAECATALFSGIVDAVTTDDIILAGLASASR--GRLEVVGKPFTQEYYGVGVKKGSNDL 228 Query: 238 YNIVSWTHYAM 248 ++ M Sbjct: 229 KKKINAAITDM 239 >gi|148988975|ref|ZP_01820375.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP6-BS73] gi|168492770|ref|ZP_02716913.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC3059-06] gi|147925472|gb|EDK76549.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP6-BS73] gi|183576870|gb|EDT97398.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC3059-06] Length = 254 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 11/241 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLVAAKPVQANTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ F Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K + + + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLTFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + +TE + + Sbjct: 176 AHRIDAFSVDRSILSGYTSKRT-----ELLDDSFKPSDYGIVTKKSNTELNDYLDNLVTK 230 Query: 248 M 248 Sbjct: 231 W 231 >gi|330890817|gb|EGH23478.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. mori str. 301020] Length = 283 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 97/252 (38%), Gaps = 4/252 (1%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + L + + S L + KRG L G + + A+G +GFD+D Sbjct: 9 KACAFVLAASFTLANAAQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDID 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R ++ +F+DPSK++++ ++ R L + ++DI + T R + +AF Sbjct: 69 IGRIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPY 126 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y +G ++ + L A V + + K ++ V+ + Sbjct: 127 YREGVALLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + R D D S+ L P + + A A+ +GD +W N V+ Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPAFAWNPQTYACAVKRGDQDWLNFVN 244 Query: 243 WTHYAMVTAEEL 254 + +T E Sbjct: 245 TALHEAMTGVEF 256 >gi|327394992|dbj|BAK12414.1| glutamine-binding protein precursor GlnH [Pantoea ananatis AJ13355] Length = 280 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 100/261 (38%), Gaps = 20/261 (7%) Query: 4 DFFVSILCLIILFF---------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 F ++ ++ L T+ + AS L + +RG L+ G F G Sbjct: 12 RFLPALFTVVALAGCTPTDNKKETAGAAPASTLQTVLQRGTLRVGDCLSFAPFGFYDKAG 71 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + G+DVD +AL+ A+ ++ + + R LQ+ ++D++ N L R + Sbjct: 72 NPDGYDVDLAKALAKAMGVK---LEMVNTTSANRIPNLQTNKVDVVFCNFTRNLERAKEI 128 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 G F + ++ K GI S ++G +I G+T D ++ + Sbjct: 129 G--FTQPYVVASEAMLVRKVSGIKSAHDMAGKTIATVKGSTN----GDEVRSMGIDVKIQ 182 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 ++ + A + + DA D + L P+ V ++ A + QGD Sbjct: 183 EYDSSQAAILAVKQGQADAMIEDNNFLAYQAKL--DPTLEVTNEALVPLEYNAFGVKQGD 240 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 W N ++ + + + E Sbjct: 241 QVWTNYLNEFLFEINASGENA 261 >gi|254818982|ref|ZP_05223983.1| GlnH [Mycobacterium intracellulare ATCC 13950] Length = 325 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 10/237 (4%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALS 68 L + F + + + + DI+ RG L G++ G F+ G+ GFDVD ++ Sbjct: 65 LTASLRPFPTKAEADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDLAGEIA 124 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 IF PS ++Y L++ ER ALQ ++DI+ + T R + F + Q Sbjct: 125 RDIFGAPSHVEYRILSSDERVTALQRGEVDIVVKTMTITCDRRKL--VNFSTVYLDANQR 182 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + + I VS LSG +CV GTT+ + + + + A + Sbjct: 183 ILAPRDSSIVKVSDLSGKRVCVAKGTTSLHRIRQI----DPPPVIVSVVNWADCLVAMQQ 238 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 DA + D S L L + P H++ P+ ++ P I +T V+ T Sbjct: 239 REIDAVSTDDSILAGL--VEEDPYLHIVGPN-MATQPYGIGINLNNTPLVRFVNGTL 292 >gi|322368978|ref|ZP_08043545.1| ABC-type glutamine/glutamate/polar amino acids transport system, substrate-binding protein [Haladaptatus paucihalophilus DX253] gi|320551709|gb|EFW93356.1| ABC-type glutamine/glutamate/polar amino acids transport system, substrate-binding protein [Haladaptatus paucihalophilus DX253] Length = 275 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 84/257 (32%), Gaps = 23/257 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + F I + + +A + G ++ G + F G+ GFDV Sbjct: 3 RRSFLRGTGGAIAALTFAENASA------QNNGTIRIGSDIPYRPFEYRTKTGELVGFDV 56 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A+ D +++ + +L + ++ T R S + F Sbjct: 57 DIANAVFEGQLDR--NYEFVQTSFDTIIPSLNNGNFRVIMSAMTITPER--SKQVDFSDP 112 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + Q ++ K I+S+ L G ++ VQ GTT E D K N ++++ Sbjct: 113 YFTAYQTVLILKNSDITSLQDLKGETVAVQKGTTGEAAAQDLKKQFNGDLTIDSYDQIPG 172 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDR-------------PSEHVILPDIISKSPLAP 228 +A ++ A D + ND E+ ++ Sbjct: 173 AFSALGNNQAAAVINDNTVNAEFAQQNDNVTFLKGEGAAQEQGKENAPPYLTLTVEEYGI 232 Query: 229 AIIQGDTEWYNIVSWTH 245 A + D + N V+ Sbjct: 233 AFRKNDDQLKNQVNDAL 249 >gi|163856729|ref|YP_001631027.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Bordetella petrii DSM 12804] gi|163260457|emb|CAP42759.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Bordetella petrii] Length = 262 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 82/249 (32%), Gaps = 8/249 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGF 59 M K V + C L + + G++ N GF Sbjct: 1 MKKLTAVFLACATSLLAACGQGDDPAPQASAPAARKIVVGLDDNFPPMGFRDENNQLVGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D R + + + +++ P++ + L K++D L T R+ ++ F Sbjct: 61 DIDMAREAARRMGIE---VEFKPIDWSAKEAELNGKRVDALWNGLTITEERKKNIA--FT 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ + + + + L+G + Q G++ + + +F Sbjct: 116 APYMANHQIILVAQASPVQNKADLAGRVVGAQDGSSAVDAIKKDAQVAASLKELKLFGDN 175 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R DA D + L + R ++ +L + + + D E Sbjct: 176 VTALMDLSAGRLDAVVVDE--VVGRYLASKRAGQYRVLDENFGTEDYGVGLRKDDAELLA 233 Query: 240 IVSWTHYAM 248 + T AM Sbjct: 234 KLDQTLDAM 242 >gi|302388441|ref|YP_003824263.1| extracellular solute-binding protein family 3 [Clostridium saccharolyticum WM1] gi|302199069|gb|ADL06640.1| extracellular solute-binding protein family 3 [Clostridium saccharolyticum WM1] Length = 290 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 86/276 (31%), Gaps = 36/276 (13%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL------------------GDIKKR--------- 33 M K ++ + + + S + + K+ Sbjct: 1 MKKKILLAAVFGAAVLASGCSGQKNAVTASAASDPAASTTKESANETAKETEAGKKEEAG 60 Query: 34 -GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 G G + V NG++ GFD++ + +++ + P+ + + L Sbjct: 61 TGTFTVGFDQDFPPMGFVGENGEYTGFDLELAQEVANRLGKKFVP---QPIAWDAKDMEL 117 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152 +S ID + T G + + Q F++ K I +++ LSG + VQA Sbjct: 118 ESGNIDCIWNGFTITG---REEGYTWTKPYMENSQVFVVGKDSSIKTLADLSGKIVEVQA 174 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 ++ E L K DA D + A R + Sbjct: 175 DSSAEKALQSDEKLAGTFGTLQTTPDYNTAFMDLEMGAVDAIAMD--VIVAAYQIEQRKA 232 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + +IL + ++ +G+ + V AM Sbjct: 233 DFIILDEALAAEEYGVGFKKGNETLRDQVQEQLEAM 268 >gi|212716942|ref|ZP_03325070.1| hypothetical protein BIFCAT_01886 [Bifidobacterium catenulatum DSM 16992] gi|212660227|gb|EEB20802.1| hypothetical protein BIFCAT_01886 [Bifidobacterium catenulatum DSM 16992] Length = 279 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 89/251 (35%), Gaps = 15/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + +F S G ++ GI G +G + GFD Sbjct: 10 MLRRVIATFCACACVFAVSACGADD------ADGKIRVGIKFDQPGLGFK-KSGTYVGFD 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + +I + +K+R LQ+ +D + T R+ ++F Sbjct: 63 VDVAKYIAKKLGYSEDQIVWKEAPSKQREAMLQNGDVDFIVATYSITDERKKV--VSFAG 120 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ ++ K I L+G +C G+T+ +T+ + F + + Sbjct: 121 PYFVAGQDLLVRKDETSIKGPEDLNGKRLCSVTGSTSAVTVKEKFA---NEVQLMEQPGY 177 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + DA T D L L + ++ ++ I + DT+ Sbjct: 178 AECATALFSGIVDAVTTDDIILAGLASASR--GRLRVVGKPFTQEYYGVGIKKDDTQLAT 235 Query: 240 IVSWTHYAMVT 250 ++ M+ Sbjct: 236 RINNAIADMIQ 246 >gi|330960987|gb|EGH61247.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 283 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 98/252 (38%), Gaps = 4/252 (1%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + L + + + S L + KRG L G + + A+G +GFD+D Sbjct: 9 KACAFVLAASFTLANAAQAADGSKLDAVLKRGNLIVGTGSTNAPWHFQGADGKLQGFDID 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R ++ +F+DPSK++++ ++ R L + ++DI + T R + +AF Sbjct: 69 IGRIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPY 126 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y +G ++ + L A V + + K ++ V+ + Sbjct: 127 YREGVALLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + R D D S+ L P + S A A+ +GD +W N V+ Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVN 244 Query: 243 WTHYAMVTAEEL 254 + +T E Sbjct: 245 TALHEAMTGVEF 256 >gi|300697784|ref|YP_003748445.1| substrate-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum CFBP2957] gi|299074508|emb|CBJ54059.1| putative substrate-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum CFBP2957] Length = 279 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 47/240 (19%), Positives = 89/240 (37%), Gaps = 6/240 (2%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----P 75 ++ L IK G ++ G V F+ + A G G+ +D C L AI ++ Sbjct: 3 AVASSPTLDRIKATGAIRLAHREGSVPFSYLDAGGKPIGYSMDLCMRLVDAIRENLKRPD 62 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K+QYL + R A+ + + D+ +T RE +AF Y ++ Sbjct: 63 LKVQYLQVTPATRMDAIMNGKADLECAST--NNARERRDKVAFTIPHYIANGRMLVKTAS 120 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 GI + L G ++ G+ + +A + + E A + A+ Sbjct: 121 GIHQLEDLRGKTVVSTRGSANGDLVRQLSEAGGLGITVVEASDHAESLAMLADGKAQAFA 180 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D L +K P+++ I+ P A + + D E+ ++ ++ E Sbjct: 181 MDDVLLAGMKANTKNPADYAIVGKTQQVVPYAIMLSKNDPEFKKLIDAAMARLMEDGEAE 240 >gi|118618243|ref|YP_906575.1| glutamine-binding lipoprotein GlnH [Mycobacterium ulcerans Agy99] gi|183980737|ref|YP_001849028.1| glutamine-binding lipoprotein GlnH [Mycobacterium marinum M] gi|118570353|gb|ABL05104.1| glutamine-binding lipoprotein GlnH [Mycobacterium ulcerans Agy99] gi|183174063|gb|ACC39173.1| glutamine-binding lipoprotein GlnH [Mycobacterium marinum M] Length = 328 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 10/230 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75 F + + + + DI+ RG L G++ G F+ G+ GFDVD ++ IF P Sbjct: 75 FPTKAEADAAVADIRARGRLIVGLDIGSNLFSFRDPITGEITGFDVDIASEVARDIFGGP 134 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 + ++Y L+A ER ALQS Q+D++ + T R + F + Q + + Sbjct: 135 THVEYRILSAAERITALQSSQVDVVVKTMTITCERRKL--VNFSTVYLDANQRILTSRDS 192 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I VS LSG +CV GTT+ + + + + A + DA + Sbjct: 193 PIFKVSDLSGKRVCVARGTTSLRRIREIAP----PPVIVSVVNWADCLVALQQREIDAVS 248 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D + L L + P H++ P+ ++ P I +T V+ T Sbjct: 249 TDDTILAGL--VEEDPYLHIVGPN-MANQPYGIGINLDNTGLVRFVNGTL 295 >gi|108797521|ref|YP_637718.1| extracellular solute-binding protein [Mycobacterium sp. MCS] gi|119866607|ref|YP_936559.1| extracellular solute-binding protein [Mycobacterium sp. KMS] gi|108767940|gb|ABG06662.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. MCS] gi|119692696|gb|ABL89769.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. KMS] Length = 331 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 53/231 (22%), Positives = 101/231 (43%), Gaps = 10/231 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75 F + + + + I++RG L G++ G F+ GD GFDVD ++ IF P Sbjct: 78 FPTRAEADAAVAYIRERGRLIVGLDIGSNLFSFRDPITGDITGFDVDIAGEIARDIFGSP 137 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +++ Y L++ +R +ALQ+ Q+D++ ++ T R+ +G F + Q + + Sbjct: 138 AQVDYRILSSADRIVALQNNQVDVVVKSMTITCERKKKVG--FSTVYLNADQRILAPRDS 195 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ + LSG +CV GTT+ + + + A + + DA + Sbjct: 196 AITRAADLSGRRVCVVKGTTSLRRVQQISP----PPIIVSTVTWADCLVALQQRQVDAVS 251 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 D + L L P H++ P +++ P + +T V+ T Sbjct: 252 TDDAILAGLVAQ--DPYLHIVGPS-MNQEPYGIGVNLENTGLVRFVNGTLQ 299 >gi|126433143|ref|YP_001068834.1| extracellular solute-binding protein [Mycobacterium sp. JLS] gi|126232943|gb|ABN96343.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. JLS] Length = 331 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 10/231 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75 F + + + + I++RG L G++ G F+ GD GFDVD ++ IF P Sbjct: 78 FPTRAEADAAVAYIRERGRLIVGLDIGSNLFSFRDPITGDITGFDVDIAGEIARDIFGSP 137 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +++ Y L++ +R +ALQ+ Q+D++ + T R+ +G F + Q + + Sbjct: 138 AQVDYRILSSADRIVALQNNQVDVVVKTMTITCERKKKVG--FSTVYLNADQRILAPRDS 195 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ + LSG +CV GTT+ + + + A + + DA + Sbjct: 196 AITRAADLSGRRVCVVKGTTSLRRVQQISP----PPIIVSTVTWADCLVALQQRQVDAVS 251 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 D + L L P H++ P +++ P + +T V+ T Sbjct: 252 TDDAILAGLVAQ--DPYLHIVGPS-MNQEPYGIGVNLENTGLVRFVNGTLQ 299 >gi|220924480|ref|YP_002499782.1| family 3 extracellular solute-binding protein [Methylobacterium nodulans ORS 2060] gi|219949087|gb|ACL59479.1| extracellular solute-binding protein family 3 [Methylobacterium nodulans ORS 2060] Length = 302 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 50/235 (21%), Positives = 86/235 (36%), Gaps = 6/235 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQY 80 L IK+ G + G V F+ + + GF +D C + A+ K+ Y Sbjct: 31 GTLKKIKETGTIVIGYRESSVPFSYLDNDQKPIGFSMDLCGHVVEAVKKKLSLSDLKVAY 90 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P+N+ R + + +D+ +T L R+ + F T+ ++ GISS Sbjct: 91 NPVNSATRLPLVANGTVDLECGSTANQLARQKQVA--FSVSTFVAQFKWLTRVDSGISSP 148 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G ++ V AGT T L + ++ + E R A+ D Sbjct: 149 DDLKGRNVVVTAGTNTAQFLNKLNQEQKLQLTITQGKDHAESFLLVETGRASAFMEDDIL 208 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L +K P+ IL S P A + D + +V T ++ + Sbjct: 209 LAGVKANAKEPARFKILDKAYSADPYALMFRRDDPAFKAVVDETLIGLMKSGAFA 263 >gi|319645105|ref|ZP_07999338.1| arginine-binding extracellular protein artP [Bacillus sp. BT1B_CT2] gi|317392914|gb|EFV73708.1| arginine-binding extracellular protein artP [Bacillus sp. BT1B_CT2] Length = 255 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 91/255 (35%), Gaps = 13/255 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + T+ T++S L G + F + GFD Sbjct: 1 MKKWMLLVVTACVTFALTACGTSSSSDDK----KTLVMGTSADYPPFESKDGD-KIVGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL+ + I+ ++ AL++ ++DI+ T R+ + F Sbjct: 56 VDLAEALAEKTGHE---IEVKDMDFNGLVTALKTNKVDIVLSGMTPTPKRKK--QVDFSN 110 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y + K GI S+ L G ++ VQ G+ E + + R+ Sbjct: 111 VYYTAHNMIVTKKSSGIKSLDDLKGKTVGVQLGSIQEEKAKELTP--DYDLKVENRNRIS 168 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ +A R DA + N+ + + + + K+ A A +G ++ Sbjct: 169 DLTEEIKAGRFDAAIIEDIVAEKYINKNEELAGYNLPKEPDEKAGSAIAFKKG-SDLTEK 227 Query: 241 VSWTHYAMVTAEELG 255 + M + EL Sbjct: 228 FNKALEEMEKSGELD 242 >gi|302537785|ref|ZP_07290127.1| glutamate binding periplasmic protein [Streptomyces sp. C] gi|302446680|gb|EFL18496.1| glutamate binding periplasmic protein [Streptomyces sp. C] Length = 301 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 89/235 (37%), Gaps = 14/235 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + +KRG L G+ E +G + GFD++ + +++++ DP I++ Sbjct: 49 ESRTWQKARKRGRLVVGVKEDQPYMGEKDPASGRYSGFDIEIAKMMAASLGFDPKTIEFK 108 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG-FIMHKKKGISSV 140 + + R ALQ+ QID R+ +G F + GQ + +K I Sbjct: 109 TIASANRETALQNGQIDYYVGTYTINDNRKKQVG--FAGPYFMAGQSLLVRRNEKDIKGP 166 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G +C AG+T L F + ++ ++ DA + D S Sbjct: 167 EDLAGKKVCSAAGSTPYQRLQREFPKA----VLVAYDTYSVCVDNLLTYQVDAVSTDDSI 222 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L P E ++ + SK P + +GD + + A+E Sbjct: 223 LLGYAAKV--PEELKVVGEPFSKEPYGIGVPRGDDAL----RFALDDALEADEKN 271 >gi|107103712|ref|ZP_01367630.1| hypothetical protein PaerPA_01004783 [Pseudomonas aeruginosa PACS2] gi|218889476|ref|YP_002438340.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254237070|ref|ZP_04930393.1| hypothetical protein PACG_03107 [Pseudomonas aeruginosa C3719] gi|254242877|ref|ZP_04936199.1| hypothetical protein PA2G_03646 [Pseudomonas aeruginosa 2192] gi|126169001|gb|EAZ54512.1| hypothetical protein PACG_03107 [Pseudomonas aeruginosa C3719] gi|126196255|gb|EAZ60318.1| hypothetical protein PA2G_03646 [Pseudomonas aeruginosa 2192] gi|218769699|emb|CAW25459.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 276 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 98/262 (37%), Gaps = 15/262 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + + + S + +A L DI+K+G + G + + G+ Sbjct: 1 MKIRLLGAAVAAVFTLIGS-AAHADDLADIRKKGEIVIGTLGTDEPNSFIDPKTRQIIGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VD ++ AI P + ++ R LQ +D+L+ + RE + F Sbjct: 60 EVDLGTEIAKAIGVKP---VFKQISVAARIPELQQGHVDLLAASLTHNKEREAL--VDFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 GQ ++ K G +S+ L G + G T E + + FE Sbjct: 115 YSIIVTGQKALVKKNAGFASLHDLDGKKVLTVKGGTQEPNIRKALP----NAQVVTFETS 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++ A + + A+ D SAL + ILP+ +S LA A +G+ + Sbjct: 171 QQALLALQQGKGQAFVDDESALVNDFGKLGAAAGGYAILPENLSTEALAIAFRKGNPQLK 230 Query: 239 NIVSWTHYAMV---TAEELGIT 257 +V T + AE+L + Sbjct: 231 QLVDSTLAGLERSGAAEQLYLK 252 >gi|322435380|ref|YP_004217592.1| hypothetical protein AciX9_1764 [Acidobacterium sp. MP5ACTX9] gi|321163107|gb|ADW68812.1| hypothetical protein AciX9_1764 [Acidobacterium sp. MP5ACTX9] Length = 311 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 86/305 (28%), Positives = 139/305 (45%), Gaps = 13/305 (4%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 LIIL S A + I+ L+C I+ + +G FD++ C A++ A Sbjct: 5 LLIILATLSLPACAQSIETIRTTKLLRCAIDQEPPEYTTEDLHGPRVAFDLELCHAVALA 64 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 I D L + E L+++ D L+ L + GL DG GF+ Sbjct: 65 IGPDIKVQPILVSDEAEAISVLKARHAD-LAPTLSLNLTNATTPGLWLGLPIVLDGTGFM 123 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + V LSG IC A T TE L +F +++ + P F E+DAAY Sbjct: 124 VPTATL--DVKSLSGKKICFFAETETETILKTWFTQNHLDFLPYPFSEEGEMDAAYTTGN 181 Query: 191 CDAYTGDISALYALKLTNDRPSE-HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 C A GD++ L + + R + + +LP +I+ +PLAPA D + +WT+ ++ Sbjct: 182 CAAMAGDLTRLASTRQNYGRAAARYKLLPTLIASAPLAPAS--TDPTLTQLATWTNQLLL 239 Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309 AE L NI + + + +P +QR LG ++ +G L L W R++ +GNY ++ Sbjct: 240 NAEAL-----NITHIPEHSQDPAIQRLLG--QTHELGPRLHLDDAWPIRVLTTLGNYADL 292 Query: 310 FDRNL 314 + R L Sbjct: 293 YARTL 297 >gi|291618612|ref|YP_003521354.1| GlnH [Pantoea ananatis LMG 20103] gi|291153642|gb|ADD78226.1| GlnH [Pantoea ananatis LMG 20103] Length = 280 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 100/261 (38%), Gaps = 20/261 (7%) Query: 4 DFFVSILCLIILFF---------TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 F ++ ++ L T+ + AS L + +RG L+ G F G Sbjct: 12 RFLPALFTVVALAGCTPTDNKNETAGAAPASTLQTVLQRGTLRVGDCLSFAPFGFYDKAG 71 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + G+DVD +AL+ A+ ++ + + R LQ+ ++D++ N L R + Sbjct: 72 NPDGYDVDLAKALAKAMGVK---LEMVNTTSANRIPNLQTNKVDVVFCNFTRNLERAKEI 128 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 G F + ++ K GI S ++G +I G+T D ++ + Sbjct: 129 G--FTQPYVVASEAMLVRKVSGIKSAHDMAGKTIATVKGSTN----GDEVRSMGIDVKIQ 182 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 ++ + A + + DA D + L P+ V ++ A + QGD Sbjct: 183 EYDSSQAAILAVKQGQADAMIEDNNFLAYQAKL--DPTLEVTNEALVPLEYNAFGVKQGD 240 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 W N ++ + + + E Sbjct: 241 QVWTNYLNEFLFEINASGENA 261 >gi|239827641|ref|YP_002950265.1| extracellular solute-binding protein family 3 [Geobacillus sp. WCH70] gi|239807934|gb|ACS24999.1| extracellular solute-binding protein family 3 [Geobacillus sp. WCH70] Length = 260 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 98/259 (37%), Gaps = 12/259 (4%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDW 56 M K FF++ + LI L + G +++ L+ G + F + + Sbjct: 1 MKKSLLFFIASILLIGLLSACGTGGEQKNGSGEQKKVLRMGTSADYAPFEYIDTTKGNEI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD + ++ + + + + ++ ALQS ++D + T R+ + Sbjct: 61 IGFDVDLAKMITKELGYE---FEIVDMDFTGLIPALQSGKVDFVLAGMTPTKERKK--NV 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + Y + K GI +V L G ++ VQ G+ E A + Sbjct: 116 DFSDVYYVARNMIVSKKGSGIKTVEDLKGKTVGVQTGSIQEGEANKI--AKKVDMKIESR 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 R+ E+ +A R DA + + +++ E +P KS A A +G ++ Sbjct: 174 NRIPELIQEIQAGRFDAAIIEDTVAKGYLDSSNGKLEGHTIPTDKEKSGYAIAFPKG-SK 232 Query: 237 WYNIVSWTHYAMVTAEELG 255 + + + E+ Sbjct: 233 LRDEFNKVLQEKMKNGEVD 251 >gi|315039013|ref|YP_004032581.1| amino acid ABC transporter [Lactobacillus amylovorus GRL 1112] gi|325957438|ref|YP_004292850.1| amino acid ABC transporter [Lactobacillus acidophilus 30SC] gi|312277146|gb|ADQ59786.1| amino acid ABC transporter [Lactobacillus amylovorus GRL 1112] gi|325334003|gb|ADZ07911.1| amino acid ABC transporter [Lactobacillus acidophilus 30SC] gi|327184146|gb|AEA32593.1| amino acid ABC transporter [Lactobacillus amylovorus GRL 1118] Length = 272 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 89/249 (35%), Gaps = 13/249 (5%) Query: 1 MYKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K + +L ++L T + I ++ + G++ V K NG Sbjct: 1 MKKRWIFVLLATLMLVLTGCESVQERANTQDTWSKIAQKNQVVVGLDDSFVPMGFEKKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G+D+D +A+ + + ++ L++ ID+L T R+ Sbjct: 61 QLTGYDIDLAKAVFKQYG---IHVSFQTIDWSMNVTELRNGTIDLLWNGYSITPERKK-- 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 +AF + Q ++ K GI+S Q+ + +Q G+T E + K + Sbjct: 116 KVAFSRPYLRNRQVLVVKKDSGINSFKQMKKYELGMQTGSTAEQWYETKQNVLHAKKT-V 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQG 233 +++ + A R D + ++ ++ D + K A + +G Sbjct: 175 LYDTISNSFLDLNAGRIQGILLDEVYANYYIAHMTKSKDYKVIQNDNVPKDLFAVGMRKG 234 Query: 234 DTEWYNIVS 242 D V+ Sbjct: 235 DKTLRKKVN 243 >gi|260460786|ref|ZP_05809036.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|259033363|gb|EEW34624.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] Length = 260 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 91/253 (35%), Gaps = 13/253 (5%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F L+ FT+ S A L IK G LK ++ F V + G Sbjct: 1 MNRVFSGIAVAALLLASTFTAVSAKADDLEKIKAAGELKISMSGQYPPFNFVNDQNEVVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD D +A++ I + I L + + D + + T RE + F Sbjct: 61 FDADIGKAIAERIGVKGTIIT---TAWDGIIAGLLANKYDTVVGSMTITPEREKV--VDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G+ +++ + S+ +L G ++ V G T E + + ++ Sbjct: 116 VGPYYHAGRAVFVNQDSKVQSLDELKGKTLGVTLGETHEKWARE-----QGGWDIRTYKG 170 Query: 179 VEEIDAAYRAHRCDA-YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + E+ +A R DA +I + A+K T ++ + + AI + + Sbjct: 171 LPELLLELKAGRVDAIVVDNIPVMVAVKETGEKVRKLDTPDIEGGSVAIGIAIRKDNPAL 230 Query: 238 YNIVSWTHYAMVT 250 + M+ Sbjct: 231 KAAMQKALDEMMA 243 >gi|331002454|ref|ZP_08325972.1| hypothetical protein HMPREF0491_00834 [Lachnospiraceae oral taxon 107 str. F0167] gi|330410270|gb|EGG89704.1| hypothetical protein HMPREF0491_00834 [Lachnospiraceae oral taxon 107 str. F0167] Length = 274 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 89/270 (32%), Gaps = 24/270 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIK-----------KRGFLKCGINTGLVGFAE 49 M K + + +L I+L S ++ + + + K G + Sbjct: 1 MKKIYLLGVLATIMLAGCSSASTDTSIAESKLTDETSIAGTDTNTTFTVGFDQDFPPMGF 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V +G++ GFD+D ++ + + I+Y P+ + + L S ID + T Sbjct: 61 VGDDGEFTGFDLDLAAEVAKRLGKE---IKYQPIAWDAKDMELTSGNIDCIWNGFS-TQN 116 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 RE + + Q F++ I+S L+G ++ VQ ++ E L + + Sbjct: 117 RE--DKYTWTKPYMKNDQVFVVRSDSDINSFEDLAGKTVEVQTDSSAEAVLKENTELSGT 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 DA S + ++T +L +S A Sbjct: 175 FGKLQTVADFNTGFMDLEMGGVDALAM-NSVVANYQITKRGGEGFKVLDKPLSSEEYAVG 233 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 G+T + V EE+ Sbjct: 234 FKLGNTILRDEVQTAL------EEMKADGT 257 >gi|327192287|gb|EGE59252.1| extracellular solute-binding protein family 3 [Rhizobium etli CNPAF512] Length = 307 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 98/250 (39%), Gaps = 4/250 (1%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V L + L T + S L ++ RG L G + + A+ +GFDVD Sbjct: 37 VMSLAVAALMSTPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQGFDVDMGHI 96 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ A+F DP KI+Y+ ++ R + + ++DI + T R + +AF Y +G Sbjct: 97 IAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAFTIPYYREG 154 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 G ++ + + L A V + A + +E V+ I A Sbjct: 155 VGLMLKADGKYADYAALKAAGSSVTISVLQNVYAEAMVHAALPEATVDQYESVDLIYQAL 214 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + R DA D S+L P + + A A+ +GD +W N V+ + Sbjct: 215 ESGRADAVATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWLNFVNTALH 272 Query: 247 AMVTAEELGI 256 +T E Sbjct: 273 EAMTGVEFDF 282 >gi|226951612|ref|ZP_03822076.1| extracellular solute-binding protein [Acinetobacter sp. ATCC 27244] gi|226837642|gb|EEH70025.1| extracellular solute-binding protein [Acinetobacter sp. ATCC 27244] Length = 298 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 86/239 (35%), Gaps = 8/239 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDF----CRALSSAIFDDPS 76 + + L IK G + G + F+ + N +G+ D A+ + Sbjct: 25 STSGTLNKIKSSGTIVLGYRDSSIPFSYIAGNPNQPEGYAHDLQLKVVEAVKQKLNMPDL 84 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 KI+Y + ++ R + + +D+ +T R + F + G + K G Sbjct: 85 KIRYNLVTSQNRIPLVSNGTVDLECGSTTNNKER--QQQVDFSVGFFEVGSRLLTAKDSG 142 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I + L G + AGTT+E + + + + I + E + R A+ Sbjct: 143 IKDFADLKGKKLVTTAGTTSERYIRQHQQELGIG-EIISAKDHAESFLMLQNGRAVAFMM 201 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D L K P++ I+ + + +GDT + +V A + E+ Sbjct: 202 DDILLAGEKSKAKDPNKWDIVGTAPIQEIYGCMLRKGDTGFKQVVDDAIKATYASGEIN 260 >gi|167836674|ref|ZP_02463557.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis MSMB43] Length = 271 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 94/247 (38%), Gaps = 11/247 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59 M F + L + L + +A L DIKK G L+ F V G Sbjct: 1 MKLKPFATWLIGLSLVAAHAAAHADRLDDIKKSGVLRVATFDSNPPFGFVDRKTNRIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + +++ P N R L S ++D++ N T R + F Sbjct: 61 DVDYAQALADRLG---VRLKLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QIDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F+ K + S QL+G I GTT E+TL + F + ++ Sbjct: 116 IPYFASGQQFLAKKG-VLKSADQLNGLRIGADKGTTNEVTLREKFPKA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + + IS + + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEVPAFSISNDYMGVGVPKGETRLVA 230 Query: 240 IVSWTHY 246 V+ T Sbjct: 231 FVNDTLT 237 >gi|323526240|ref|YP_004228393.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323383242|gb|ADX55333.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 264 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 86/247 (34%), Gaps = 17/247 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K FV+ LI FT+ + +A +L +K+RG L+ G+ F +G+ G+DV Sbjct: 7 KKLFVA--ALIGASFTAVTAHADDLLDQVKQRGTLRVGLEGTFPPFNSKAPSGELVGYDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +A+++ + P ++ LQ+ + D++ T R+ L F P Sbjct: 65 DIAKAVAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDARK--QALDFSPA 119 Query: 122 TYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I K S+ L G + V GT + Sbjct: 120 YTYSAAQLIQRKDDTRQFKSLEDLKGKKLGVGLGTNYMD-----MAKSVPGIDVKTYPGA 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A R DA D L L + P ++ S +P + + ++ Sbjct: 175 PEYLRDLAAGRLDAALNDRLMLAYLLKNSQLP--LRTGANVGSGNPSGIPFRKNNPKFAK 232 Query: 240 IVSWTHY 246 + Sbjct: 233 AIDDAMT 239 >gi|261839899|gb|ACX99664.1| hypothetical protein HPKB_1103 [Helicobacter pylori 52] Length = 244 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 13/236 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 18 KVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGQYQGY 77 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 78 DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 135 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G + K I ++ +L + V GTT + F + + FE+ Sbjct: 136 KPYMKVALGVVS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 190 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E A + A D + L A P + + + K +APAI +G Sbjct: 191 TETFLALLNDKAIALAHDNTLLLAWIKQ--HPEFKLGITSLGDKDVIAPAIKKGQP 244 >gi|209519485|ref|ZP_03268280.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209500086|gb|EEA00147.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 319 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 81/235 (34%), Gaps = 7/235 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIFDDPSKIQY 80 L I G + G+ + F+ G+ D + + ++ Sbjct: 49 GTLKKIHDDGVVVLGVRETSIPFSYFDGQ-RTVGYSQDIALQIVDEIRKTLGMPQLRVHE 107 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + + R L + QID+ +T T+ RE AF + I K GI+ Sbjct: 108 VTVTSSNRTPMLMNNQIDLECGSTTHTVERE--NVAAFSDSIFQYAVRMITRKNSGITDF 165 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+G + AGT+ E L + + +E A + R A+ D Sbjct: 166 ADLAGKPVVTTAGTSDERLLRSLNTDRQLNMRIMSARDHQEAFTAMKEGRAVAFVMDEPI 225 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 +Y K T+ P + ++ + A +GD +V+ T+ + Sbjct: 226 VYGFKATDPHPDDFIVTGTPLGYEVYACMFRKGDEPLRALVNRVIAHSQTSGDAE 280 >gi|320324045|gb|EFW80128.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. B076] gi|320329010|gb|EFW85009.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330880666|gb|EGH14815.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 283 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 97/252 (38%), Gaps = 4/252 (1%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + L + + S L + KRG L G + + A+G +GFD+D Sbjct: 9 KACAFVLAASFTLANAAQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDID 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R ++ +F+DPSK++++ ++ R L + ++DI + T R + +AF Sbjct: 69 IGRIIAEGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPY 126 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y +G ++ + L A V + + K ++ V+ + Sbjct: 127 YREGVALLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + R D D S+ L P + S A A+ +GD +W N V+ Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVN 244 Query: 243 WTHYAMVTAEEL 254 + +T E Sbjct: 245 TALHEAMTGVEF 256 >gi|183602357|ref|ZP_02963723.1| probable solute-binding protein for glutamate/aspartate ABC transporter system [Bifidobacterium animalis subsp. lactis HN019] gi|219683328|ref|YP_002469711.1| solute-binding protein for glutamate/aspartate ABC transporter system [Bifidobacterium animalis subsp. lactis AD011] gi|241191289|ref|YP_002968683.1| amino acid ABC transporter periplasmic component [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196695|ref|YP_002970250.1| amino acid ABC transporter periplasmic protein [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218276|gb|EDT88921.1| probable solute-binding protein for glutamate/aspartate ABC transporter system [Bifidobacterium animalis subsp. lactis HN019] gi|219620978|gb|ACL29135.1| probable solute-binding protein for glutamate/aspartate ABC transporter system [Bifidobacterium animalis subsp. lactis AD011] gi|240249681|gb|ACS46621.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251249|gb|ACS48188.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177405|gb|ADC84651.1| Glutamine-binding protein [Bifidobacterium animalis subsp. lactis BB-12] gi|295794282|gb|ADG33817.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium animalis subsp. lactis V9] Length = 302 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 11/225 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S + A L +IKK G L+ + + F V +G + G+D++F +AL+ + P Sbjct: 48 STNAKARTLDEIKKSGELRVAVFSDKAPFGYVDKDGKYAGYDIEFAQALADGLGVKP--- 104 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Y ++ R L S ++D+ N T R + F G + I Sbjct: 105 VYTSVDPAARVDVLASNKVDVTLANFTETPERAE--KVDFSKPYMKVALGIVAPDAAPIK 162 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 V L+G ++ V GTT E F+ ++ + +++ + A R DA + D Sbjct: 163 DVKDLNGKTLIVAKGTTAETY----FEKNHPEIKLQKYDQYADAYNALLDGRGDAMSTDN 218 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + + A V + +I +A A+ +G+ E + ++ Sbjct: 219 TEVLAWA--KANKGYRVDVTEIGDVDVIAAAVQKGNKELLDYIND 261 >gi|158334719|ref|YP_001515891.1| extracellular solute-binding protein [Acaryochloris marina MBIC11017] gi|158304960|gb|ABW26577.1| extracellular solute-binding protein, family 3 [Acaryochloris marina MBIC11017] Length = 322 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 53/332 (15%), Positives = 113/332 (34%), Gaps = 57/332 (17%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + L F+ S+L +++ G L G + FA G +G+ ++ Sbjct: 28 KTIAILTILFTYLGAPFAAAESVLEKVQRTGQLTAGTSQEAQPFAFADEQGQLQGYSIEM 87 Query: 64 CRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + + + ++Q + +N ++R L ++DI+ + +T R+ + F Sbjct: 88 LQLIKDQLTKELGREVQLQLVAINPEDRIPKLVQGKVDIVCDASSYTWERDK--QIDFSV 145 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G ++ ++ L+ I A TT E + + ++ + Sbjct: 146 SYGLTGTRLLVKQENAAWETPDLANKKIAALAATTNETAIRR----AQPQAQIVIVKNHG 201 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A + + DA+ D L A T PS I+ SK +A + + ++++ + Sbjct: 202 EGYDALQQGKVDAFAADGILLDAWLQTAKNPSAFNIIG-YFSKEGIACMMPENNSKFADQ 260 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V+++ RF+ Sbjct: 261 VNYSL----------------------------VRFMQGYLQGKAS-------------- 278 Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSK 332 Y E FDR G+Q+++ + + AL + Sbjct: 279 -----YVETFDRWFGDQAKVPLTQDLRALVLE 305 >gi|160895520|ref|YP_001561102.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160361104|gb|ABX32717.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 293 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 88/235 (37%), Gaps = 7/235 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD----DPSKIQY 80 L ++ G + V F+ + NG G V+ +A++ A+ K+Q+ Sbjct: 23 DTLAKVRDSGRITLAYRESSVPFSYLD-NGKPIGMTVEMSQAVAEAVKKAVNRPDLKVQW 81 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + ++ R L + ID+ +T +R + F ++ G ++ K GI + Sbjct: 82 QAVTSQNRMPLLANGTIDLECGSTTNNTVRGKEVA--FAINHFYTGTRLLVKKSSGIKNY 139 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L ++ + GTT L + ++ + + R A+ D Sbjct: 140 ADLKDKTVAITTGTTNLQVLRKANADKAWGMNIVMAKDHADGFLLVENDRAAAFGMDDIL 199 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L+ L T P + ++ D + P A + + D ++ +V M+ + Sbjct: 200 LFGLIPTAKNPGDFEVVADSLQVEPYACMLRKDDPQFKQLVDGVIGDMMKSGAFA 254 >gi|328947349|ref|YP_004364686.1| ABC transporter periplasmic protein family 3 [Treponema succinifaciens DSM 2489] gi|328447673|gb|AEB13389.1| ABC-type transporter, periplasmic subunit family 3 [Treponema succinifaciens DSM 2489] Length = 256 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 86/245 (35%), Gaps = 15/245 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V+++C +++ + S K G G++ N + G+D Sbjct: 1 MKK--IVAVICGLVVCLSMASA------KKKSSGKFVLGLDDSFPPLGFRDKNNEIVGYD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D R ++S + ++ P++ + + L + +ID + T R+ ++ Sbjct: 53 IDLAREVASRLG---LELVCQPIDWSTKEMELNTGKIDCIWNGLTLTEERKRAMAC--SE 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q ++ I S+S L G I VQAG++ + + + F+ Sbjct: 108 PYLANAQVVVVRNNGEIKSLSDLKGKKIGVQAGSSAQEAIDGAPDFKKSLKEIVEFKENV 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 D D+ +P VIL + ++ A + + + Sbjct: 168 TALNDLEFGNLDGVVMDLVVAGYSITQGKKP--LVILDETLAPEEYGIAFSRKNKSLRDK 225 Query: 241 VSWTH 245 V T Sbjct: 226 VQKTL 230 >gi|307729015|ref|YP_003906239.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] gi|307583550|gb|ADN56948.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] Length = 317 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 81/234 (34%), Gaps = 6/234 (2%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD- 74 + L + K + G V F+ A+ G+ +D + I + Sbjct: 37 AGAAEPELTGTLLKVSKERVITIGYRDASVPFSYYDADQKPIGYSIDVAHLIIERIKTEL 96 Query: 75 ---PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 +++ +P+ ++ R LQ+ ID +T R + ++F + ++ Sbjct: 97 KLAELQVRTIPITSQNRISLLQNNTIDFECTSTTNNAER--AQQVSFSNSFFTIDTRLLV 154 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 ++K GI + L ++ V AGTT+E L +M I + E R Sbjct: 155 NRKSGIKDFADLKQKTVVVGAGTTSEKILRKMNVEKSMGMDIISAKDHTESFLMLSTGRA 214 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A D + L + P ++ I+ + + + D I+ Sbjct: 215 KAMMMDDALLAGERAKARNPDDYEIVGTPQTHEAYGCMLRRNDAPMKAIMDAAI 268 >gi|328956871|ref|YP_004374257.1| glutamine-binding periplasmic protein [Carnobacterium sp. 17-4] gi|328673195|gb|AEB29241.1| glutamine-binding periplasmic protein [Carnobacterium sp. 17-4] Length = 266 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 94/238 (39%), Gaps = 11/238 (4%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALS 68 +C + + + I I++ + G+ F + + KGFD+D +A++ Sbjct: 17 VCFLAACGSKSAAKVDIAERIEENPTITWGVKVDTNLFGLYDIQSSEIKGFDIDIAKAIT 76 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + D +++ + +K R L++ ID + T R+ + F I + GQ Sbjct: 77 EELTGDADNAEFVEVTSKTRIPLLKNGNIDAIIATMTITEERKE--QVNFTDIYFDAGQA 134 Query: 129 FIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 ++ I S+ L+ ++ G+T+ + + N + E E A + Sbjct: 135 LLVPNDSSIQSLDDLTADTTVLAVKGSTSAQNIRELSPEAN----VLELENYSEAFTALQ 190 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + DA T D + L + D P + + ++ P AI +G + N V+ Sbjct: 191 SGQGDAVTTDNAILLGIIA--DNPG-YRLAGGNFTQEPYGIAINKGQDAFLNEVNEAL 245 >gi|319948590|ref|ZP_08022716.1| glutamine-binding protein GlnH [Dietzia cinnamea P4] gi|319437740|gb|EFV92734.1| glutamine-binding protein GlnH [Dietzia cinnamea P4] Length = 359 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 12/219 (5%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I +RG L G++ G F+ +G GFDVD R +++ IF DP ++++ L + Sbjct: 110 RILQRGRLIVGLDQGSNLFSFRDPASGQLTGFDVDLAREIAADIFGDPRQVEFRSLTSAN 169 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R AL++ Q+D++ R+ T R + F Y Q + + GI+ + L G Sbjct: 170 RLEALENDQVDVVIRSMSITCAR--RERVTFSVPYYQAYQRVLTVRGSGITEIEHLEGKR 227 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +CV AGTT+ L A + + + A + ++ DA T D + L + Sbjct: 228 VCVAAGTTSASRL----WAELERITVLSVNTWADCLVAIQQNQVDAITTDDAILVGITAQ 283 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYN--IVSWT 244 + I+ + P I + E +V Sbjct: 284 DP---YLQIVGPQLDAEPYGVGIAKSTPENNTDGLVRQV 319 >gi|257487796|ref|ZP_05641837.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331008517|gb|EGH88573.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 283 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 97/252 (38%), Gaps = 4/252 (1%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + L + + S L + KRG L G + + A+G +GFD+D Sbjct: 9 KACAFVLAASFTLVNAAQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDID 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R ++ +F+DPSK++++ ++ R L + ++DI + T R + +AF Sbjct: 69 IGRIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPY 126 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y +G ++ + L A V + + K ++ V+ + Sbjct: 127 YREGVALLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + R D D S+ L P + S A A+ +GD +W N V+ Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVN 244 Query: 243 WTHYAMVTAEEL 254 + +T E Sbjct: 245 TALHEAMTGVEF 256 >gi|120612711|ref|YP_972389.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120591175|gb|ABM34615.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 314 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 89/249 (35%), Gaps = 6/249 (2%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 L + +++A +L I G L FA A G G+ V+ C+ ++ Sbjct: 27 ALLGAASLCCAVASHAGVLERIASGGKLVVAYRDAASPFAFKDAAGRPAGYAVELCQRVA 86 Query: 69 SAI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 A+ +I Y+P++ R A+ D+ ++ R +AF + Sbjct: 87 EAVRRKTGRKGMEIAYVPVDLGNRMEAITQGGADLECGSSTNNAER--RQNVAFTIPHFI 144 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 G ++ I + + G + GTT + + H ++ + I + Sbjct: 145 TGTRLLVKASSPIERIEDMGGHKLVSTRGTTALRAVQQLNREHALQINVIEAPDDQRAVE 204 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 DA+ D LYA P ++ ++ LA + + D E+ +V Sbjct: 205 MVEKGEADAFAMDDVLLYAFAAGRPDPKALKVVGKFVTAEALAIMLPKDDPEFKKVVDDE 264 Query: 245 HYAMVTAEE 253 ++++ E Sbjct: 265 MRRLISSRE 273 >gi|57242093|ref|ZP_00370033.1| amino acid ABC transporter, amino acid-binding protein [Campylobacter upsaliensis RM3195] gi|57017285|gb|EAL54066.1| amino acid ABC transporter, amino acid-binding protein [Campylobacter upsaliensis RM3195] Length = 257 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 61/225 (27%), Positives = 94/225 (41%), Gaps = 8/225 (3%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKI 78 S NA L DIK +G L G+ + +A + G+ KGF+VD + L+ I D +KI Sbjct: 22 TSANAGKLEDIKAKGTLVVGVKNDVPHYALLDQKTGEIKGFEVDVAKKLAKEILGDENKI 81 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + +NAK R L + +D++ T R+ F Y D G ++ K+KG Sbjct: 82 KLVAVNAKTRGPLLDNGTLDVVIATFTITPERKKI--YNFSQPYYQDAIGLLVLKEKGYK 139 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S++ + GA I V TT+ + + K + F I AA A R D ++ D Sbjct: 140 SLADMKGAKIGVAQAATTKRVIGEAAKKAGVSVSFSEFPDYPSIKAALDAKRVDVFSVDK 199 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 S L ILPD + D E+ + Sbjct: 200 SILLGYVDEKS-----EILPDSFEPQDYGIVSKKDDVEFAAFIDK 239 >gi|256375607|ref|YP_003099267.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] gi|255919910|gb|ACU35421.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] Length = 274 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 93/252 (36%), Gaps = 9/252 (3%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 +L TS + + ++G + G+ G + +G+ +GFD+D R +++ Sbjct: 12 ATAAVLALTSCGADDDTVLGRAEQGRITIGVAHDQPGLGLRRQDGNLRGFDIDVARYVAT 71 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + S I ++ ++R L S ++D++ T R + F Y GQ Sbjct: 72 ELGVPESGITWVEAPPEDRERLLTSGEVDLVVNGYSITPKR--REVIDFAGPYYTAGQDL 129 Query: 130 IMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 ++ + G +C GTT+ + D F + + R E A Sbjct: 130 LVLIDNQEITGPDSLSRGQRLCSVTGTTSAQYVKDTFAKN---VKLVEQPRFSECVTALL 186 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 A DA T D L P ++ + S+ + +G+ E + V+ Sbjct: 187 AGEVDALTTDDVVLAGYAAQ--NPELLRVVGEPFSEEEYGIGLPKGEQETKDAVTAALRK 244 Query: 248 MVTAEELGITQK 259 MV + E Q+ Sbjct: 245 MVDSGEWKRAQE 256 >gi|153869942|ref|ZP_01999446.1| Lysine-arginine-ornithine-binding periplasmic protein [Beggiatoa sp. PS] gi|152073593|gb|EDN70555.1| Lysine-arginine-ornithine-binding periplasmic protein [Beggiatoa sp. PS] Length = 110 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 49/110 (44%), Positives = 73/110 (66%), Gaps = 3/110 (2%) Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292 GD +W I+ + ++ AEELGITQ N++ + + NP V+R LG++ S E +GL Sbjct: 4 GDEQWVKIIRTILFGLINAEELGITQANVDTMM-SSDNPQVRRLLGVEGSFGQAE-IGLE 61 Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342 D R +R +GNYGE+++RNLG+ + +PRG N LW+ GGL+YAPP+R Sbjct: 62 PDAIARAVRAVGNYGEIYERNLGSG-GIGMPRGLNRLWTDGGLIYAPPLR 110 >gi|160900971|ref|YP_001566553.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160366555|gb|ABX38168.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 268 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 78/252 (30%), Gaps = 14/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSFST-NASILGDIKKRG------FLKCGINTGLVGFAEVKAN 53 M K ++++ L L +AS L G++ Sbjct: 1 MKKRTLLAMVALSALLAACGKNESASTAAAPVAAPVPAAMTKLVIGLDDNFPPMGFRDDK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFD+D R + + + + + P++ + L K++D L T R+ + Sbjct: 61 NEIVGFDIDMAREAAKRMNVE---VDFKPIDWSAKEAELVGKRVDALWNGLTITEERKKN 117 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + Q I+ I + L+G + Q G++ + Sbjct: 118 IA--FTAPYMENHQIIIVRANSDIKDKAGLAGKVVGAQDGSSAVDAIKKDAAVAASFKDL 175 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 F A R DA D + + E+++L D + + Sbjct: 176 KTFGDNITALMDLSAGRLDAVVVDE--VVGRFHVAKKAGEYLVLEDNFGTEDYGVGLRKE 233 Query: 234 DTEWYNIVSWTH 245 DTE + Sbjct: 234 DTEVLGKLEAAL 245 >gi|91781298|ref|YP_556505.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91693958|gb|ABE37155.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 267 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 84/255 (32%), Gaps = 15/255 (5%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++ L L + FT+ + +A +L +K+ G L+ G+ F ++G + Sbjct: 1 MKLSKRLLINALALSAVGFTAVAAHAEDLLDTVKQAGVLRIGLEGTYPPFDYRNSDGQLE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + P Q++P ALQS + D++ T R L Sbjct: 61 GFDVDVAKAVATKLGVKP---QFIPTEWSGIIAALQSGKFDVIVNQVTITPQR--KQVLD 115 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + I S+ + G T D + Sbjct: 116 FSQPYTYSAAQLIQRTDDKREFRSLDEFKGDKKLGVTLGTNY----DQMARAVPGINVQT 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E + A R DA D + + + + + Q + Sbjct: 172 YPGAPEKLSDLAAKRIDATIDDR-LMLPYIIKTSQLPLRPGAVLKGADQDMGIPFRQNNP 230 Query: 236 EWYNIVSWTHYAMVT 250 ++ + + Sbjct: 231 KFAKALDDALTGLKQ 245 >gi|91224516|ref|ZP_01259778.1| hypothetical binding protein component ofABC transporter [Vibrio alginolyticus 12G01] gi|269968273|ref|ZP_06182299.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|91190858|gb|EAS77125.1| hypothetical binding protein component ofABC transporter [Vibrio alginolyticus 12G01] gi|269827130|gb|EEZ81438.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 262 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 89/249 (35%), Gaps = 18/249 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L ++ IL DIK G LK ++G + F NG + GFD Sbjct: 1 MKK---LLCFAALGLAVSTTVNADPILDDIKSTGELKVCFDSGYMPFEMTAKNGQYIGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ A+ + + L + + ++ T +R + + F Sbjct: 58 IDLGKQMARAMDVKFVPVN---TSWDGIIPTLLTGKCHMIMGGMTITPMR--NTQVNFAD 112 Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVF 176 GQ ++ + +SS L+ V TT E + Y + ++ Sbjct: 113 PYVVIGQSILVDLKHEGKVSSYRDLNSPEYVVATKLGTTGEQAVKRYLPKAKIN----LY 168 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E E + DA+ D Y + + + L + PL A+ QG+ + Sbjct: 169 ETQSEAVLEVANGKVDAFVYDFP--YNSIYVAENKGQLMHLAKPFTYEPLGWAVPQGNPD 226 Query: 237 WYNIVSWTH 245 N ++ Sbjct: 227 TLNFLNNYL 235 >gi|86152788|ref|ZP_01070993.1| glutamine-binding protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843673|gb|EAQ60883.1| glutamine-binding protein [Campylobacter jejuni subsp. jejuni HB93-13] Length = 259 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 10/245 (4%) Query: 2 YKDFFVSILCLI--ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K + + + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 4 RKSLLKLAVFALGVCVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + +D + T R+ F Sbjct: 64 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 121 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + K + F Sbjct: 122 SEPYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGKAAKKIGIDVKFSEFPD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R DA++ D S L ILPD + D + Sbjct: 182 YPSIKAALDAKRVDAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 236 Query: 239 NIVSW 243 V Sbjct: 237 KYVDD 241 >gi|315638192|ref|ZP_07893374.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter upsaliensis JV21] gi|315481728|gb|EFU72350.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter upsaliensis JV21] Length = 262 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 61/225 (27%), Positives = 94/225 (41%), Gaps = 8/225 (3%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKI 78 S NA L DIK +G L G+ + +A + G+ KGF+VD + L+ I D +KI Sbjct: 27 TSANAGKLEDIKAKGTLVVGVKNDVPHYALLDQKTGEIKGFEVDVAKKLAKEILGDENKI 86 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + +NAK R L + +D++ T R+ F Y D G ++ K+KG Sbjct: 87 KLVAVNAKTRGPLLDNGTLDVVIATFTITPERKKI--YNFSQPYYQDAIGLLVLKEKGYK 144 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S++ + GA I V TT+ + + K + F I AA A R D ++ D Sbjct: 145 SLADMKGAKIGVAQAATTKRVIGEAAKKAGVSVSFSEFPDYPSIKAALDAKRVDVFSVDK 204 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 S L ILPD + D E+ + Sbjct: 205 SILLGYVDEKS-----EILPDSFEPQDYGIVSKKDDVEFAAFIDK 244 >gi|308067739|ref|YP_003869344.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Paenibacillus polymyxa E681] gi|305857018|gb|ADM68806.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Paenibacillus polymyxa E681] Length = 255 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 100/286 (34%), Gaps = 33/286 (11%) Query: 1 MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F ++ L+++ S K L GI+ N + GF Sbjct: 1 MRKAAMFTMLIGLMMIVLAGCSGG-------KDDSKLIIGIDDKFAPMGFRDENNELTGF 53 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D+ +A + ++++ P++ + L S +ID++ T R+ + F Sbjct: 54 DIDYAKAAGEQMGK---QVEFQPIDWSAKESELNSGRIDLIWNGYTITDERKE--KVLFT 108 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ +S +S L+G ++ +Q ++ L D F Sbjct: 109 KPYLKNSQVIVVPATSSLSKLSDLAGKTVGLQTLSSAADAL-DANPIKGKLKQVSEFPDN 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + A + + +L + ++ + +G+ E Sbjct: 168 VLALTDLKTGRLDAVVIDE--VVAKYYMSKEQGTYKLLDESLAPEEYGIGVKKGNEELLT 225 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKSSN 284 + +++ K+ ++ +++ G DK N Sbjct: 226 QLQSAL----------------DELHKNGKAAEISKKWFGEDKVLN 255 >gi|237800640|ref|ZP_04589101.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023499|gb|EGI03556.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 283 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 97/252 (38%), Gaps = 4/252 (1%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + L T + S L + KRG L G + + A+G +GFD+D Sbjct: 9 KACAFVLAASFSLTNTGQAAQGSKLEAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDID 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R ++ +F+DPSK++++ ++ R L + ++DI + T R + +AF Sbjct: 69 IGRIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPY 126 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y +G ++ + L A V + + K ++ V+ + Sbjct: 127 YREGVALLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + R D D S+ L P + S A A+ +GD +W N V+ Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPSFAWSPQTYACAVKRGDQDWLNFVN 244 Query: 243 WTHYAMVTAEEL 254 + +T E Sbjct: 245 TALHEAMTGVEF 256 >gi|89901740|ref|YP_524211.1| extracellular solute-binding protein [Rhodoferax ferrireducens T118] gi|89346477|gb|ABD70680.1| extracellular solute-binding protein, family 3 [Rhodoferax ferrireducens T118] Length = 262 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 79/248 (31%), Gaps = 7/248 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L+ + + G++ + GFD Sbjct: 1 MKKHVLWLMAGLMGAIVLTGCGKKEAPAAPAPAKAIVIGLDDNFPPMGFRDDKNELIGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + + P++ + L +ID+L T R+ + F Sbjct: 61 IDLAKEAGKRLG---VAVNFKPIDWNAKEAELNGNRIDVLWNGLTITEERKA--NILFTK 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q ++ +K I++ +QL+GA + VQ G++ + F Sbjct: 116 PYLENRQIIVVTEKSPIATKAQLAGAVVGVQDGSSAVEAIQKDAATAKSIKELKKFGDNV 175 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A R DA D + T +P E+ +L D + DTE Sbjct: 176 TALMDLSAGRLDALVVDE--IVGRYYTGKKPGEYRVLEDNFGTEDYGVGTRKSDTELSAR 233 Query: 241 VSWTHYAM 248 ++ M Sbjct: 234 LNKALDDM 241 >gi|168492861|ref|ZP_02717004.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae CDC3059-06] gi|183576884|gb|EDT97412.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae CDC3059-06] Length = 286 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 27/259 (10%) Query: 1 MY--KDFFVSILCLIILFF-TSFS-------------TNASILGDIKKRGFLKCGINTGL 44 M K + L F T+ S A + + KK G L+ + Sbjct: 1 MKLFKPLLTVLALAFALIFITACSSGGNAGPSSGKTTAKARTIDENKKSGELRIAVFGDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V +G ++G+D++ L+ + ++Y+ ++A R L S ++DI N Sbjct: 61 KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYISVDAANRAEYLISNKVDITLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + K I+ V QL G ++ V GTT E F Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + ++ + +++ + A R DA++ D + + A + V + + Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229 Query: 225 PLAPAIIQGDTEWYNIVSW 243 +A A+ +G+ E + ++ Sbjct: 230 TIAAAVQKGNQELLDFINK 248 >gi|254519793|ref|ZP_05131849.1| extracellular solute-binding protein [Clostridium sp. 7_2_43FAA] gi|226913542|gb|EEH98743.1| extracellular solute-binding protein [Clostridium sp. 7_2_43FAA] Length = 266 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 85/251 (33%), Gaps = 10/251 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K S+L L+ L S + + ++ L G + V NG++ GFD+ Sbjct: 5 KKILITSLLGLMSLALVSCG--EKKIENSMEKEELVLGFDDTFVPMGFKDKNGEYTGFDI 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + + + + I + P++ + L + ID + T R+ +AF Sbjct: 63 ELAKGIGEKLNKK---IIFQPIDWSMKETELNNGNIDFIWNGYSVTKERKE--KVAFSKE 117 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERV 179 + Q I I+S +L A + Q ++ + N + FE Sbjct: 118 YLNNRQVIITLANSKINSKKELKDAVVAAQNQSSAVDAIEADGDIVNSFKDGKIVTFETN 177 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A R DA D L + ++ +L + K A + + D + Sbjct: 178 NEALMDLEAGRVDAVVADE-ILAKYYINQRGAEKYKVLDEDFGKESYAVGMRKDDKDLVE 236 Query: 240 IVSWTHYAMVT 250 + +V Sbjct: 237 AFNNAFDELVN 247 >gi|134299236|ref|YP_001112732.1| extracellular solute-binding protein [Desulfotomaculum reducens MI-1] gi|134051936|gb|ABO49907.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfotomaculum reducens MI-1] Length = 277 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 85/231 (36%), Gaps = 12/231 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + T + L IK++G + G++ + GFD+D ++ + I Sbjct: 37 AKQTEKNTLDQIKEKGVIVAGLDDTFAPMGYRDESNKLVGFDIDMGEEMAKRLGVK---I 93 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGI 137 Q+ P +AL SK+ DI+ T R+ + F DGQ ++ K G Sbjct: 94 QWQPTQWDGIIMALDSKRFDIILSGMTVTEERKK--SINFSVPYVGDGQIMVVKKGTTGF 151 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 ++ + L G + QAG++ E + +++ E + R D Sbjct: 152 NTAADLKGKVVGTQAGSSGEEAVKKVEGIK----EVKLYKTYPEAFTDLQIGRIPVVVCD 207 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 A + R + I+ + I+ PLA + + D E + M Sbjct: 208 RIT--ASHYISKRADTYEIVGEKITDEPLAIGLRKSDPELKEAIDNVLNEM 256 >gi|311694310|gb|ADP97183.1| ABC transporter periplasmic amino acid-binding protein [marine bacterium HP15] Length = 272 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 56/290 (19%), Positives = 98/290 (33%), Gaps = 23/290 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + L TS S A L + +RG L CG+ N + GFD Sbjct: 1 MIRKL--APLVFACAAVTSVSATADQLDTVIQRGTLNCGVVLDFPPMGYFDENNEPAGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C L A+ D + L L ER +L S + D++ +T TL R ++G F Sbjct: 59 VDYCNDLGEALGVD---VNVLNLTWGERIPSLVSGKTDVVIGSTSDTLERAKTVG--FTY 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179 + I ++ K I S L + GTT E Y + K + F+ Sbjct: 114 PYFVFKFQVIANEDKNIESFDDLKNLKVGAALGTTYETEYLAYAEQQGWGKDNYTSFKSE 173 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + DA + + + + + + + W N Sbjct: 174 NDAYLGLYQGKVDAIISTNTNIATKLRSEEFADFEAGPYVPNYDDVVGIIAKRDEVAWIN 233 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL 289 ++ + Q+ N + G D +++ ++L Sbjct: 234 YLNLFL---------------VRQIRDGNMNEAYNKHFGTDAPADLIKSL 268 >gi|255994764|ref|ZP_05427899.1| amino acid ABC transporter, amino acid-binding protein [Eubacterium saphenum ATCC 49989] gi|255993477|gb|EEU03566.1| amino acid ABC transporter, amino acid-binding protein [Eubacterium saphenum ATCC 49989] Length = 277 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 81/256 (31%), Gaps = 14/256 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDI------KKRGFLKCGINTGLVGFAEVKANG 54 M + V + ++ + + K G L G++ Sbjct: 6 MKRILTVVMAIILAVSVVGLAGCKKEEEKKDGGLGNAKEGKLVVGLDDTFAPMGFRDKKN 65 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+D ++ + ++++ P+ K + L L+SK+ID + T RE ++ Sbjct: 66 KLVGFDIDLATEVAKQM---KLEVEFKPIQWKAKDLELKSKKIDCVWNGMSVTPEREKAM 122 Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 L + + K I S L +I Q + L A N Sbjct: 123 SL--SNKYLDNKIILMTSNNKVNIKSAKDLEKYNIGTQEDSAGLEMLKAQKNAKNFMKKV 180 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + ++ A ++ R D D I + + A + Sbjct: 181 KEYPTYDDAINALKSGRVDVIAIDQVLGAYKNKNLKEKLA--ICKYALGQDAYAIGFRKE 238 Query: 234 DTEWYNIVSWTHYAMV 249 DT + V+ + A++ Sbjct: 239 DTALRDKVNESIKAII 254 >gi|206901753|ref|YP_002250771.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Dictyoglomus thermophilum H-6-12] gi|206740856|gb|ACI19914.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Dictyoglomus thermophilum H-6-12] Length = 257 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 49/224 (21%), Positives = 86/224 (38%), Gaps = 11/224 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A + IKK G LK G + F ++ + GFD+D + ++ A+ +Q + Sbjct: 22 AGAVERIKKAGVLKVGSDVAYAPFEFMEGD-KPVGFDIDIAQEIAKALGVK---LQIINT 77 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQ 142 + AL++K+ DI+ T R+ + F Y GQ ++ I+S Sbjct: 78 SFDGIIAALKAKKFDIIISAMTITEERKK--EIDFSIPYYDSGQIIVVRSDNKDINSEKD 135 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G + VQ GTT ELT +K +E + E R DA D+ Sbjct: 136 LKGKIVGVQLGTTGELTAKKLKDQVGIK-EIRSYETIPEAFMDLELGRLDAVINDLP--V 192 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 +L + + P + + A+ + D + ++ Sbjct: 193 SLYYSKNNPK-LKCVGKPFTIEQYGIAVRKEDKDLLKKINEILT 235 >gi|323127385|gb|ADX24682.1| amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 279 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 40/268 (14%), Positives = 88/268 (32%), Gaps = 14/268 (5%) Query: 1 MYKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + + L I L + + + +K + G + V +G Sbjct: 3 MRRSIRIVFLAAISLLLVACGTANKTAKSGDAWKTYQKEKTITLGFDNTFVPMGYKDESG 62 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 D KGFD+D +A+ + + +N + L++ +ID++ T R+ Sbjct: 63 DNKGFDIDLAKAVFKQYG---ITVNFQAINWDLKEAELKNGKIDMIWNGYSMTKERQA-- 117 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KY 171 +AF + Q ++ K GI+ S + + Q+G++ L + K Sbjct: 118 KVAFTIPYMKNEQVIVVKKSSGITDTSDMKNKVLGAQSGSSGYDALTRHHKVLKDLVKDQ 177 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 +E + + +R D D ++ ++ ++ A + Sbjct: 178 DATQYETFTQAFIDLKTNRIDGLLIDKVYANYYLKQENQLDDYQLVSTGFDNEQFAVGLR 237 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQK 259 + D ++ M E + Sbjct: 238 KEDKTLQKKINEALKKMYQDGEFQAISQ 265 >gi|317401748|gb|EFV82367.1| extracellular solute-binding protein family 3 [Achromobacter xylosoxidans C54] Length = 260 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 96/285 (33%), Gaps = 25/285 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + LC + T+A L DI KRG LK + F V A+ G+D Sbjct: 1 MNRRTLLLSLCTAATLLAAPLTHADTLDDIVKRGTLKVAVPQDFPPFGSVGADMKPLGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + ++ +P+ + R LQ++++D++ + RE + F Sbjct: 61 IDTAALIAKQLGVK---LELVPVTSANRVPYLQTRKVDLVISSLGKNPEREK--AIDFSD 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G ++S + L+G +I V G ++ L +E Sbjct: 116 AYAPFFNGVFGPADVKVASAADLAGKTIGVTRGAVEDIELTKIAP---PTATLKRYEDNN 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + + A+ P + +I SP + + + + Sbjct: 173 GTITAFLSGQVPLIATGNVVAAAILAR--NPPKKPETKFLIKDSPCYIGLNKDEPKLRAK 230 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285 V+ N + +++LG D ++ Sbjct: 231 VNEIL---------------ANAKRDGSLTAISRKWLGADLPKDL 260 >gi|326793193|ref|YP_004311014.1| ABC transporter periplasmic protein [Clostridium lentocellum DSM 5427] gi|326543957|gb|ADZ85816.1| ABC-type transporter, periplasmic subunit family 3 [Clostridium lentocellum DSM 5427] Length = 293 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 79/226 (34%), Gaps = 12/226 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 +++L L G++ G+ GFDVD +A++ + I++ Sbjct: 54 QAASNVLDK----DTLIIGLDDTFAPMGFKDEKGEIVGFDVDLAKAVAEKLGKK---IEF 106 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P++ + L+S ID + T R+ + F + Q I I++ Sbjct: 107 QPIDWSMKETELKSGNIDFIWNGYSITDERKEQVA--FGTPYLKNRQIIITLADSPINTK 164 Query: 141 SQLSGASICVQAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L + Q G+T + + A P+ +E ++ A R DA D Sbjct: 165 ADLKDKVVGAQTGSTAVDAIETEPEVLATFKDGKPVTYETNNDVLMDLEAGRLDAVVADE 224 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + ++ ++ IL + + + + DT + Sbjct: 225 -IIVKYYISKKGAEKYKILDEDFGEEEYGVGMRKEDTALVEAFNKA 269 >gi|197295090|ref|YP_002153631.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] gi|195944569|emb|CAR57173.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] Length = 313 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 98/241 (40%), Gaps = 6/241 (2%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDP 75 + + L ++ G + G + F+ + A G+ ++ C+AL S+I + Sbjct: 38 APAQLTGTLAKVRGSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVSSIEDAINRS 97 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 I+++P+ + R A+ S ++D+ +T L R+ + F PI + G ++ + Sbjct: 98 LTIRWVPVTSDTRIDAVVSGKVDLECGSTTSNLERQKRVA--FSPIIFVAGTKVMVKRGA 155 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L+G + V AGTT E TL D + V + A DA+ Sbjct: 156 PIRSFRDLAGKKVAVTAGTTNEKTLRDLNDKFRLGIQLQVVPDHAQGFALVANGGADAFA 215 Query: 196 GDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D LY L + ++ ++ D +S P + D + +V T + E+ Sbjct: 216 TDDVLLYGLIAENAGKGGQYDVVGDFLSYDPYGIMFRKDDPQLAQVVKTTFQELAADGEI 275 Query: 255 G 255 Sbjct: 276 A 276 >gi|331697741|ref|YP_004333980.1| ABC transporter periplasmic subunit [Pseudonocardia dioxanivorans CB1190] gi|326952430|gb|AEA26127.1| ABC-type transporter, periplasmic subunit family 3 [Pseudonocardia dioxanivorans CB1190] Length = 295 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 85/270 (31%), Gaps = 30/270 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS----------------------ILGDIKKRGFLKC 38 M V L L ++ S I++RG + Sbjct: 1 MKLRTLVVGLVAGALALSACGKEGSPGSEGSGVSQQVAAGVQVTGSPTFDAIQQRGRVVI 60 Query: 39 GINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 G+ G A G + GFD++ R +++ + KI Y + + R + ++ Sbjct: 61 GVKDDQPGLGFKDATTGQFSGFDIEIARLVAAQLGYGADKIDYKTVPSAAREDTISRGEV 120 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTT 156 D R ++F + GQG ++ + + L G +C G+T Sbjct: 121 DYYVGTYTINDNR--KQRVSFAGPYFIAGQGLLVRSDETAITGKDTLKGKKVCSVTGSTP 178 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 + D + + F+ + A + D T D + L +P + + Sbjct: 179 IQRVRDQ--GLTEPGNIVEFQTYTQCVDQLLAKQVDVVTTDDAILKGYASQ--QPDKLKV 234 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + S P + + D ++ Sbjct: 235 VGETFSTEPYGIGLNKDDAALRAKINDILQ 264 >gi|268592306|ref|ZP_06126527.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Providencia rettgeri DSM 1131] gi|291312087|gb|EFE52540.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Providencia rettgeri DSM 1131] Length = 279 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 94/248 (37%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M ++L L L T+ +A L DIK+ G ++ + F + G+ Sbjct: 1 MKARILTTVL-LTGLALTANVASADKLDDIKQAGVIRISVFDSNPPFGFIDPQTKKLAGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD + ++ + ++ P N R L S ++D++ N T R + F Sbjct: 60 DVDIAQEIADGLGVK---LELRPTNPANRIPLLTSGKVDLIGANFTITDERAK--QVDFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K + + + I GT E+TL + F I ++ Sbjct: 115 IPDFATGQKFIARKG-VLKTPDDIKPLRIGADKGTVQEVTLRERFPE----TKVISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237 + AA R A T D + L L ++ I P ++K A A +G+T Sbjct: 170 PQAFAALRNGNVQAITQDDAKLVGLLGNLPEKVKADFEISPFSLTKEYQALAASKGETRL 229 Query: 238 YNIVSWTH 245 V+ T Sbjct: 230 VENVNETL 237 >gi|239941192|ref|ZP_04693129.1| putative ABC transporter solute-binding protein [Streptomyces roseosporus NRRL 15998] gi|239987666|ref|ZP_04708330.1| putative ABC transporter solute-binding protein [Streptomyces roseosporus NRRL 11379] Length = 344 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 84/242 (34%), Gaps = 15/242 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73 + + + IK+RG L G++ + +GD +GFD+D RA++ + Sbjct: 69 ASLPASGDDGPNIDKIKERGKLIAGVDQNSFRWGYRNPESGDLEGFDIDLVRAIADDLLG 128 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DP + + + +R AL++ ++D++ R R ++F + GQ + K Sbjct: 129 DPDAVIFRAIPTNQRIAALENDRVDVVVRTMTINCKR--LEQVSFSTAYFQAGQQVLAPK 186 Query: 134 KKGISSVS-QLSGASICVQAGTTTELTL---------ADYFKAHNMKYHPIVFERVEEID 183 + I+ L G +C G+T L D F + + Sbjct: 187 ESPITGYDSSLKGKRVCSAEGSTAYEALEKKSFGALYKDDFDGTERDPDLLTVPNQLDCL 246 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + DA D + P+ + D + A +G + V+ Sbjct: 247 VRLQLGEVDAVVTDNALAAGQAAQ--DPAVELKGKDPFTTEYYGVATKKGSDDLVARVNK 304 Query: 244 TH 245 Sbjct: 305 VL 306 >gi|170748665|ref|YP_001754925.1| extracellular solute-binding protein [Methylobacterium radiotolerans JCM 2831] gi|170655187|gb|ACB24242.1| extracellular solute-binding protein family 3 [Methylobacterium radiotolerans JCM 2831] Length = 301 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 56/239 (23%), Positives = 97/239 (40%), Gaps = 11/239 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-----KANGDWKGFDVDFCRALSSAI 71 ++ L + +RG + G V F+ V + G+ +D C ++ + Sbjct: 18 ASAVEVLTGTLRSVAERGEIVLGYRESSVPFSFVEGKQPDGSPRPIGYAIDLCGEIADDV 77 Query: 72 F---DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 P KI+Y P+ A+ R A+ S +ID+ +T R + F P+ Y Sbjct: 78 QAAIGRPVKIRYAPVTAETRIEAVTSGKIDLECGSTTANAERRKQVA--FSPVDYISATQ 135 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ + GI+S L G ++ V AGTT E + D + + A +A Sbjct: 136 LLVRRGSGIASYRDLGGRTVVVTAGTTNEKAVRDQLARLKINAQVVTAPDHAASYAMVKA 195 Query: 189 HRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + DA+ D LY L T +++ +LPD +S P + D+E +V T Sbjct: 196 GKADAFATDDVLLYGLIATDAKDGADYTVLPDKLSYEPYGIMFRKDDSELAGLVQQTFT 254 >gi|148985280|ref|ZP_01818503.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP3-BS71] gi|147922478|gb|EDK73597.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus pneumoniae SP3-BS71] gi|301799733|emb|CBW32298.1| putative periplasmic solute-binding transport protein [Streptococcus pneumoniae OXC141] Length = 288 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 27/259 (10%) Query: 1 MY--KDFFVSILCLIILFF-TSFS-------------TNASILGDIKKRGFLKCGINTGL 44 M K + L F T+ S A + + KK G L+ + Sbjct: 1 MKLFKPLLTVLALAFALIFITACSSGGNAGPSSGKTTAKARTIDENKKSGELRIAVFGDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V +G ++G+D++ L+ + ++Y+ ++A R L S ++DI N Sbjct: 61 KPFGYVDNDGSYQGYDIELGNQLAQDLGVK---VKYISVDAANRAEYLISNKVDITLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + K I+ V QL G ++ V GTT E F Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + ++ + +++ + A R DA++ D + + A + V + + Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229 Query: 225 PLAPAIIQGDTEWYNIVSW 243 +A A+ +G+ E + ++ Sbjct: 230 TIAAAVQKGNQELLDFINK 248 >gi|241895706|ref|ZP_04783002.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Weissella paramesenteroides ATCC 33313] gi|241871073|gb|EER74824.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Weissella paramesenteroides ATCC 33313] Length = 277 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 85/244 (34%), Gaps = 8/244 (3%) Query: 5 FFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + +L LI FF S ++ + + G++ V +G G+DVD Sbjct: 17 LVIIVLALIGGFFWYRSVHSQDTWRQVTADKTVVIGVDDTFVPMGFRDKSGKLIGYDVDL 76 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 RA I ++ P++ + L++ ID++ R+ +AF + Sbjct: 77 ARASLKKIGLKA---KFQPIDWSMKETELKTGHIDMIWNGYTINSDRKK--KVAFSNPYH 131 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPIVFERVEE 181 D Q + K + I+ +S L G + Q G++ LT + + + ++ ++ Sbjct: 132 HDRQVIVTMKNQQINKLSDLKGKRLGAQTGSSGLLTYTEKGNSLRKIVGSDAQQYDTFDK 191 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + R +A D P I+ + +GD N V Sbjct: 192 ALNDLQVGRLNAVLIDADYAGYYIAHEKDPEAFKIIQTNFGTDSYGVGMRKGDVTLRNKV 251 Query: 242 SWTH 245 + Sbjct: 252 NEAL 255 >gi|315652085|ref|ZP_07905086.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium saburreum DSM 3986] gi|315485732|gb|EFU76113.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium saburreum DSM 3986] Length = 282 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 90/278 (32%), Gaps = 32/278 (11%) Query: 1 MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRG--------------FLKCGIN 41 M K + + +L I+L S + ++AS I + G + Sbjct: 1 MKKIYLLGVLATIMLVGCSSAKTIESSSASTDTSIAESKLTDETSIAGTDANKTFTVGFD 60 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 V +G++ GFD+D ++ + + I+Y P+ + + L S ID + Sbjct: 61 QDFPPMGFVGDDGEFTGFDLDLAAEVAKRLGKE---IKYQPIAWDAKDMELTSGNIDCIW 117 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 T RE + + Q F++ I+S L+G ++ VQ ++ E L Sbjct: 118 NGFS-TQNRE--DKYTWTKPYMKNDQVFVVRSDSDINSFVDLAGKTVEVQTDSSAEAVLK 174 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 + + DA S + ++T +L + Sbjct: 175 ENTELSGTFGKLQTVADFNTGFMDLEMGGVDALAM-NSVVANYQITKRGGKGFKVLDKPL 233 Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 S A G+T + V EE+ Sbjct: 234 SSEEYAVGFKLGNTILRDEVQTAL------EEMKADGT 265 >gi|320547237|ref|ZP_08041530.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] gi|320448125|gb|EFW88875.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] Length = 279 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 65/280 (23%), Positives = 117/280 (41%), Gaps = 21/280 (7%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKA 52 M K S+ L + FFT+ T A + I+ G LK G+ + F A Sbjct: 10 MKKKICLAVLASLSLLFMSFFTASKTFADTTSEQIKKIQDAGVLKVGVKQDVPNFGYYSA 69 Query: 53 -NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G ++G ++D + ++ + + Y + + R L + QID+L T R+ Sbjct: 70 ESGKYEGMEIDLAKKIAKTLGVK---VAYTAVTTQTREALLDNGQIDLLIATYTITDERK 126 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 S + Y+D GF+++ KG+ ++S L G +I V G+TT+LT+ +Y KAHN+K+ Sbjct: 127 ASYAI--SNPYYYDEIGFLVNTGKGLKTISDLDGKTIGVAQGSTTKLTIEEYGKAHNLKF 184 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + E+ + A R DA++ D S L I+ + + A Sbjct: 185 KFVQLGSFPELAISLHAKRIDAFSVDKSILTGYVSKKT-----TIINEGFNTQEYGIAAK 239 Query: 232 QGDTEWYNIVSWTHYAMVTAEELG--ITQKNINQVSKDTT 269 + + E + V+ L + N+ + Sbjct: 240 KSNQEVIDYVNSLLDDWKADGSLQKLYDKYNLKPAKAENN 279 >gi|239620790|ref|ZP_04663821.1| ABC-type amino acid transport/signal transduction system [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239516366|gb|EEQ56233.1| ABC-type amino acid transport/signal transduction system [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 300 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 11/228 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 +S + A L +IKK G +K + + F V +G ++G+DV F L+ + +P Sbjct: 45 TSSSANAKARSLDEIKKSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAEQLAKDLGVEP 104 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 Y ++ R L S ++D++ N T R+ + F G + + Sbjct: 105 E---YTSVDPAARVDVLTSNKVDLVLANFTVTDERKE--KVDFAKPYMKVALGVVSPESA 159 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ VSQL G ++ + GTT E +F+ + +++ + A R DA++ Sbjct: 160 QITDVSQLDGKTLIIAKGTTAET----WFEKNAPNVKLQKYDQYADAYNALLDGRGDAFS 215 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 D + + A V + + +APA+ +GDTE N V+ Sbjct: 216 TDNTEVLAWA--KSNKGFKVGITHLGDDDTIAPAVQKGDTELLNFVND 261 >gi|51244843|ref|YP_064727.1| glutamine ABC transporter, periplasmic substrate binding protein [Desulfotalea psychrophila LSv54] gi|50875880|emb|CAG35720.1| probable glutamine ABC transporter, periplasmic substrate binding protein [Desulfotalea psychrophila LSv54] Length = 284 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 103/252 (40%), Gaps = 19/252 (7%) Query: 4 DFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 ++++ +++ +F+ + +S L I K G L+ G+N F G G Sbjct: 16 KLCIAMVLTMVMSTCAFAADINLSKSSSLNTIVKNGELRIGLNASYPPFEMTNKQGRLIG 75 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ + ++ ++ ++++ ++ AL S + D++ T R +L +AF Sbjct: 76 FDVELGKEIAKSMGVK---VKFVNMDFDGLIPALLSDKFDLIISGMTLTQQR--NLKIAF 130 Query: 119 RPITYFDGQGFI--MHKKKGISSVSQLSGASICVQA--GTTTELTLADYFKAHNMKYHPI 174 GQG + M K+K I L+ + + + GTT E Y K Sbjct: 131 SNPYVLMGQGIMVNMSKEKDIRLYRNLNKPEMKIVSCIGTTGEEAARKYLPKAQYK---- 186 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F++ + + R DA+ D+ L L+ +L + + P+A QGD Sbjct: 187 SFDQPSDSAQEVISGRADAFVYDLHVLEVLQKRMGGDKTF-LLKEPFTFEPMAIGFKQGD 245 Query: 235 TEWYNIVSWTHY 246 + N ++ + Sbjct: 246 PDLTNFINNFLF 257 >gi|224372628|ref|YP_002607000.1| binding component of abc transporter [Nautilia profundicola AmH] gi|223589307|gb|ACM93043.1| binding component of abc transporter [Nautilia profundicola AmH] Length = 266 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 96/250 (38%), Gaps = 16/250 (6%) Query: 1 MYKDFFVSILCLIILFFTS--FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++I+ L + F + S L I ++G L+ + G V F +G G Sbjct: 1 MKK-LLIAIIALASMLFAADFNVWKNSTLHSIVQKGELRVCLEPGYVPFEMRDKHGRIIG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + ++ + ++ +P AL + + DI+ T R +L + F Sbjct: 60 FDVDISKKMAKDMGVK---LKLVPTAWDGIIPALITGKCDIIISGMTITQQR--NLKVMF 114 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + GQ + K G+ S L G I + GTT E+ FK Sbjct: 115 ANPYFLVGQTLLVNKKHAGVKSYKDLDKKGIVITTKLGTTGEIAARKLFK----HATIKT 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ +R DA+ D L + + + L + ++ PL AI GD Sbjct: 171 FDSESAAVQEVLNNRADAFIYDKP-YNELFMAGKGKGKLIFLKEDLTYEPLGFAINHGDP 229 Query: 236 EWYNIVSWTH 245 ++ N ++ Sbjct: 230 DFLNWLNNFL 239 >gi|23464704|ref|NP_695307.1| solute-binding protein for glutamate/aspartate ABC transporter system [Bifidobacterium longum NCC2705] gi|189438957|ref|YP_001954038.1| amino acid ABC transporter periplasmic protein [Bifidobacterium longum DJO10A] gi|322689597|ref|YP_004209331.1| amino acid ABC transporter substrate-binding protein [Bifidobacterium longum subsp. infantis 157F] gi|23325269|gb|AAN23943.1| probable solute-binding protein for glutamate/aspartate ABC transporter system [Bifidobacterium longum NCC2705] gi|189427392|gb|ACD97540.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium longum DJO10A] gi|291516166|emb|CBK69782.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Bifidobacterium longum subsp. longum F8] gi|320460933|dbj|BAJ71553.1| amino acid ABC transporter substrate binding component [Bifidobacterium longum subsp. infantis 157F] Length = 300 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 11/228 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 +S + A L +IKK G +K + + F V +G ++G+DV F L+ + +P Sbjct: 45 TSSSANAKARSLDEIKKSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAEQLAKDLGVEP 104 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 Y ++ R L S ++D++ N T R+ + F G + + Sbjct: 105 E---YTSVDPAARVDVLTSNKVDLVLANFTVTDERKE--KVDFAKPYMKVALGVVSPESA 159 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ VSQL G ++ + GTT E +F+ + +++ + A R DA++ Sbjct: 160 QITDVSQLDGKTLIIAKGTTAET----WFEKNAPNVKLQKYDQYADAYNALLDGRGDAFS 215 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 D + + A V + + +APA+ +G+TE N V+ Sbjct: 216 TDNTEVLAWA--KSNKGFKVGITHLGDDDTIAPAVQKGNTELLNFVND 261 >gi|251782499|ref|YP_002996801.1| amino acid ABC transporter extracellular-binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391128|dbj|BAH81587.1| amino acid ABC transporter extracellular-binding protein precursor [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 280 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 40/268 (14%), Positives = 88/268 (32%), Gaps = 14/268 (5%) Query: 1 MYKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + + L I L + + + +K + G + V +G Sbjct: 4 MRRSIRIVFLAAISLLLVACGTANKTAKSGDAWKTYQKEKTITLGFDNTFVPMGYKDESG 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 D KGFD+D +A+ + + +N + L++ +ID++ T R+ Sbjct: 64 DNKGFDIDLAKAVFKQYG---ITVNFQAINWDLKEAELKNGKIDMIWNGYSMTKERQA-- 118 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KY 171 +AF + Q ++ K GI+ S + + Q+G++ L + K Sbjct: 119 KVAFTIPYMKNEQVIVVKKSSGITDTSDMKNKVLGAQSGSSGYDALTRHHKVLKDLVKDQ 178 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 +E + + +R D D ++ ++ ++ A + Sbjct: 179 DATQYETFTQAFIDLKTNRIDGLLIDKVYANYYLKQENQLDDYQLVSTGFDNEQFAVGLR 238 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQK 259 + D ++ M E + Sbjct: 239 KEDKTLQKKINEALKKMYQDGEFQAISQ 266 >gi|116628190|ref|YP_820809.1| amino acid ABC transporter periplasmic protein [Streptococcus thermophilus LMD-9] gi|116101467|gb|ABJ66613.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus thermophilus LMD-9] gi|312278805|gb|ADQ63462.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus thermophilus ND03] Length = 264 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 80/251 (31%), Gaps = 14/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 M K F ++ L+ + + + IK+ L ++ F V Sbjct: 1 MKKLFLGAMAFLVAVTLVACGSKKDADESIKENKKLVVAVSPDYPPFEFKTLVDGKDQVV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D+ +A+++ + ++ ++ +LQS + D+ T R+ + Sbjct: 61 GSDIKLAQAIANELGVK---LEVTTMSFDNVLSSLQSGKADLAISGISVTDERKKT--FD 115 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K SS+ L G + VQ GT E K I Sbjct: 116 FSDPYYETQNAIIVRKDQESTYSSLDALKGKKVAVQKGTIEEGLAKKQLK----DSTVIS 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E ++ + DA + N + + A A+ +G+ Sbjct: 172 LTAMGEAINEVKSGQVDAVDLEKPVAEGYVAQNSDLVLASVALKVDDGDAKAVAMAKGND 231 Query: 236 EWYNIVSWTHY 246 + V+ Sbjct: 232 KLKEAVNKVIK 242 >gi|319791018|ref|YP_004152658.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315593481|gb|ADU34547.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 302 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 50/240 (20%), Positives = 96/240 (40%), Gaps = 4/240 (1%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDP 75 + L IK G + G+ A + G + G+ V+ C + I + Sbjct: 23 TAQQAPTGGTLDKIKASGKVVLGVREASPPMAYMLGAGEKYVGYHVELCERVLKDITPNA 82 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++Y+ + A+ +Q+ +DI T R +AF TY Sbjct: 83 -KLEYMAVTAQNTIPLVQNGTLDIGCGPTTNNTAR--QQQVAFALTTYVSEVRMATRVDS 139 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 GI+++ QL+G ++ GTT L +A N+ Y+ ++ + E + R DA+ Sbjct: 140 GITTLDQLAGRNVSASTGTTAVQLLRKRERAQNVSYNTMLGKDHLESFLLMESGRADAFV 199 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + L + + P+ + I+ D + P+A + D + V + ++ + EL Sbjct: 200 LDDNLLAGIIANSKNPAAYRIVGDALGSEPIALLFRKDDPAFKTAVDESLRKLMKSGELE 259 >gi|256829597|ref|YP_003158325.1| extracellular solute-binding protein family 3 [Desulfomicrobium baculatum DSM 4028] gi|256578773|gb|ACU89909.1| extracellular solute-binding protein family 3 [Desulfomicrobium baculatum DSM 4028] Length = 273 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 48/229 (20%), Positives = 84/229 (36%), Gaps = 14/229 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 S L +I KRG L+ G++ G + F G+ GFDVD + ++ A+ + + Sbjct: 29 AQKSTLNEILKRGELRVGLDAGYMPFEMTDKKGEIVGFDVDMAKEMAKAMGVK---LTIV 85 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISS 139 + AL + + DI+ R +L + F GQ +++KK I+S Sbjct: 86 NTDYDGIIPALMADKFDIIISGMTVNQER--NLQINFADPYIVVGQAILLNKKHEGAITS 143 Query: 140 VSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L+ V + TT E K FE+ + + DA+ D Sbjct: 144 YKDLNDPKFTVVSRIGTTGEQAAKRMIPKAQYK----SFEKESDGAMEVVNGQADAFVYD 199 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + V+L + PL + +GD ++ N + Sbjct: 200 LPFNVVFMAQ-QGGKNLVLLDKPFTYEPLGFGVKKGDPDFLNWLDNFLT 247 >gi|302024082|ref|ZP_07249293.1| glutamine-binding protein precursor [Streptococcus suis 05HAS68] Length = 270 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 19/256 (7%) Query: 4 DFFVSILCLIILF--------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-G 54 V L LI+ + TN+ + I RG L+ G+ + F + G Sbjct: 4 RLLVCALILIVFAKQPVAQTETPASITNSDQVQAIIDRGVLRVGVKQDVPNFGYKNPDTG 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 +++G ++D R ++ + D I++ P+ A+ R L + Q+D++ T R+ L Sbjct: 64 EFEGMEIDIARKIADELGVD---IEFTPVTAQTRGPLLDNGQVDMVIATFTITEERK--L 118 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y D GF+++K GI + + L G +I V G+ T ++ + + + Sbjct: 119 LYNFTTPYYTDAVGFLVNKDSGIKTFTDLDGKTIGVAQGSITRTLISKLADKYGISVNFA 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E+ + RAHR DA++ D S L + + S S + Sbjct: 179 ELGSYPELSVSLRAHRTDAFSVDQSILSGYISSKSELMDF-----SFSASDYGIVTKLSN 233 Query: 235 TEWYNIVSWTHYAMVT 250 + N ++ Sbjct: 234 KDLNNYLNSLVEKWTA 249 >gi|227511321|ref|ZP_03941370.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus buchneri ATCC 11577] gi|227523527|ref|ZP_03953576.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus hilgardii ATCC 8290] gi|227085474|gb|EEI20786.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus buchneri ATCC 11577] gi|227089292|gb|EEI24604.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus hilgardii ATCC 8290] Length = 282 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 60/259 (23%), Positives = 104/259 (40%), Gaps = 24/259 (9%) Query: 1 MYKDFF------VSILCLIILFFTSFSTNASILG-------DIKKRGFLKCGINTGLVGF 47 M K + VS+L ++L + + IKK+G ++ + L + Sbjct: 1 MKKHWLTKLIAVVSVLATLLLVLSGCGNSKKSSSNNPSSVSQIKKKGTIRVAVFGDLPPY 60 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 V +G G+DV ++ + ++++ +NA R AL S ++D++ N T Sbjct: 61 GWVNKDGKRVGYDVKLAHQVAKDLGVK---VKFVQVNANNRVDALNSNKVDLVLANFTVT 117 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R ++F G + K K I+ VSQL ++ V GTT E +YF + Sbjct: 118 PER--KQVVSFAKPYMKVSVGVVSPKNKPITKVSQLQNKNVIVTKGTTAE----NYFTSK 171 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + F+ + A + R A D S LYA + V + I KS +A Sbjct: 172 QPNVKLLKFDSKTQQFNALKNGRGVALADDNSYLYAW--SKSNSKYTVGIKSIGPKSYIA 229 Query: 228 PAIIQGDTEWYNIVSWTHY 246 PA+ +G+ N + Sbjct: 230 PAVKKGNESLLNWTNKEIT 248 >gi|223984171|ref|ZP_03634321.1| hypothetical protein HOLDEFILI_01614 [Holdemania filiformis DSM 12042] gi|223963867|gb|EEF68229.1| hypothetical protein HOLDEFILI_01614 [Holdemania filiformis DSM 12042] Length = 267 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 88/254 (34%), Gaps = 13/254 (5%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M + ++ L ++ T + A ++ +G L GI+ N + Sbjct: 3 MKIGKLGMGLIGLALVAMTGCQSAAKPQEDSWSALEAKGKLVVGIDDTFAPMGFRDENNE 62 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+D++ +A+S + + ++ ++ + L + ID++ T R Sbjct: 63 LTGYDIEMAKAVSEKLG---LEFEFQTIDWSMKESELNAGNIDLIWNGYSITDTR--RQQ 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK--AHNMKYHP 173 +AF + Q I +S+ + L+G +I VQ ++ ++ + P Sbjct: 118 VAFSEPYLENRQLIITLADSAVSTKADLAGKTIAVQKESSALEAVSADTALTSTLKNGAP 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 F+ + A R A D + ++ +L + A + + Sbjct: 178 EEFDTNIDCFMDLEAGRSQAIVVDEVL-ARYVMKQRGQEKYKVLDENFGTEQYAVGMRKQ 236 Query: 234 DTEWYNIVSWTHYA 247 DT ++ A Sbjct: 237 DTTLLEKINEAMKA 250 >gi|88855455|ref|ZP_01130119.1| putative glutamate transporter glutamate-binding protein [marine actinobacterium PHSC20C1] gi|88815362|gb|EAR25220.1| putative glutamate transporter glutamate-binding protein [marine actinobacterium PHSC20C1] Length = 289 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 99/292 (33%), Gaps = 25/292 (8%) Query: 2 YKDFFVSILCLI-ILFFTSFST---------------NASILGDIKKRGFLKCGINTGLV 45 K +S + + IL ++ + + + + G + G Sbjct: 4 KKGLMISAIAAVGILGLSACAADTGTTNPDVVVPEFEAGTTMASLADAGKITIGTKFDQP 63 Query: 46 GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 F +G+ GFDV+ + +++++ I+++ + R +++ +DI+ Sbjct: 64 LFGLKGPSGEPVGFDVEMGKIIAASLGISEDNIEWVETVSANRETFIENGTVDIVIATYT 123 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 R+ + A + +GI+ L+G +C AG+T+E +A+ Sbjct: 124 INDKRKEVISFAGPYYNAGQDILVLEGNPEGITGPEDLAGKDVCSVAGSTSEKNIAE--- 180 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 + I + R+ A T D L L E +L + ++ P Sbjct: 181 ---YGVNLITTDTYSNCLEPLRSGTVVAVTTDNVILAGLADQ--NAGEFEVLSNPFTEEP 235 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT-QKNINQVSKDTTNPDVQRF 276 + D + + ++ + +V K T P V R+ Sbjct: 236 YGIGLGHDDDAFRDYINDVLEGSYDDGSWDSAWEATAGKVLKLPTPPAVDRY 287 >gi|257056747|ref|YP_003134579.1| amino acid-binding protein [Saccharomonospora viridis DSM 43017] gi|256586619|gb|ACU97752.1| amino acid-binding protein [Saccharomonospora viridis DSM 43017] Length = 304 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 85/229 (37%), Gaps = 8/229 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + +KK G + G+ +G++ GFDV+ R +S+ + DP KI+Y Sbjct: 55 SPTFDQMKKTGHVVVGVKDDQPNLGYKDPTSGEYSGFDVEIARLISAKLGFDPKKIEYKA 114 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVS 141 + + R A+ + + R ++F + GQG ++ K I Sbjct: 115 VPSAGREQAIINGDVHYYVGTYTINDKR--KQQISFAGPYFVAGQGLLVAKDNEDIKGKD 172 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G +C +G+T + D + + + + + + + D T D + L Sbjct: 173 DLKGKKVCSVSGSTPIQNVRD--EGLTEPENIVELQTYSQCVSELLNGQVDVVTTDDAIL 230 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 +P E ++ + ++ P + + D + V+ + Sbjct: 231 LGYAAQ--QPDELKVVGEPFTEEPYGVGLPKEDDALRDKVNDILEEAME 277 >gi|209547535|ref|YP_002279453.1| family 3 extracellular solute-binding protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538779|gb|ACI58713.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 279 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 94/250 (37%), Gaps = 4/250 (1%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V L L T + S L ++ RG L G + + A+ +GFDVD Sbjct: 9 VMSLAAAALLSTPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQGFDVDMGHI 68 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ A+F DP KI+Y+ ++ R + + ++DI + T R + +AF Y +G Sbjct: 69 IAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAFTIPYYREG 126 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 G ++ + L A + A ++ V+ I A Sbjct: 127 VGLMLKADGKYGDYAALKAAGSSATISVLQNVYAETMVHAALPDATVDQYDSVDLIYQAL 186 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + R DA D S+L P + + A A+ +GD +W N V+ + Sbjct: 187 ESGRADAVATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWLNFVNTALH 244 Query: 247 AMVTAEELGI 256 +T E Sbjct: 245 EAMTGVEFDF 254 >gi|300783210|ref|YP_003763501.1| ABC transporter substrate-binding protein [Amycolatopsis mediterranei U32] gi|299792724|gb|ADJ43099.1| ABC transport system substrate-binding protein [Amycolatopsis mediterranei U32] Length = 276 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 94/267 (35%), Gaps = 13/267 (4%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + S+L L+ + + + L GI G +E +G + Sbjct: 1 MRWRTLLGSVLLLVTASACGPAKVSPTDSLVTRASATDHLTIGIRFDAPGLSEHTVDGRF 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD ++S + I + + R L S +D++ + T R + Sbjct: 61 VGFDVDVATFVASELGVSAKDITWRETTSATRETDLTSGAVDLVVASYSITDKR--KQVV 118 Query: 117 AFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 +F + GQ ++ + I+ L+G +C G+T + D + + Sbjct: 119 SFAGPYFTTGQDLLVRRTSADIAGPEALNGRRLCSVTGSTPAQQVKDKYAQA---VQLVE 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + R + A A + DA T D L P I+ SK + + DT Sbjct: 176 YPRYSDCVTALLAGQIDAVTTDAVILAGYVAR--DPELLKIVGKPFSKESYGVGLRKDDT 233 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNIN 262 + V M+++ E + N N Sbjct: 234 QGVAAVDDAIRKMISSGEW-LRSLNAN 259 >gi|152984549|ref|YP_001348446.1| putative ABC transporter binding protein subunit [Pseudomonas aeruginosa PA7] gi|150959707|gb|ABR81732.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa PA7] Length = 268 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 94/246 (38%), Gaps = 14/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M K + + + L S A L DI+K G L+ F V A +G Sbjct: 1 MKK---LPAITALALALVSGLAQADRLEDIRKAGVLRVASFDSNPPFGFVDAKSKQIEGL 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + ++Q LP N R L + ++D++ N T R + + F Sbjct: 58 DVDYAKALADKLG---VRLQVLPTNPANRIPLLTANKVDLVLANFTITPER--AQQVDFS 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI+ K ++S L+ + V GT E L + F I ++ Sbjct: 113 IPYFSSGQQFIVKKG-TLTSPEVLNKWRVGVDKGTVNEGVLREKFP----GAKVIAYDDT 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R + A T D L L ++ + P IS + I +G+ Sbjct: 168 PFAFTALRNGQVQAITQDGPKLIGLLANVPDRDKYEVPPFTISNDLIGVGIPKGEKALTE 227 Query: 240 IVSWTH 245 V + Sbjct: 228 FVDKSL 233 >gi|295398550|ref|ZP_06808583.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Aerococcus viridans ATCC 11563] gi|294973214|gb|EFG49008.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Aerococcus viridans ATCC 11563] Length = 271 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 53/296 (17%), Positives = 114/296 (38%), Gaps = 34/296 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKR------GFLKCGINTGLVGFAEVK-AN 53 M K + + L T+ +++A+ DI +R + G+ F + A Sbjct: 1 MKKLWRIVALVAFAFLATACTSSAASQQDIAERIDSEAYPVITWGVKVDTNLFGKYNIAE 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 +GFD+D + +++ + + ++ +++ + +K R L++ +D L T + Sbjct: 61 NRIEGFDIDMAKEITNRVGGENAEAEFVEVTSKTRIPLLKNGNVDALIATMTITE--DRL 118 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYH 172 + F + + GQ ++ + I V L+ ++ G+T+ + + N Sbjct: 119 KQVDFSQVYFDAGQALMVPEDSDIEGVESLTSEHTVLAVKGSTSAQRIKEAAPDAN---- 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E E A ++ + D T D + L + N + I + P AI + Sbjct: 175 VLELENYAEAFTALKSGQGDTMTTDNAILLGIMEQNPG---YKIAGSTFTNEPYGIAINK 231 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKSSNIGE 287 G + N V+ I+ + D T ++ ++ G D S+I E Sbjct: 232 GQDAFLNEVNQA----------------IDDMVADGTYQEIYAKWFGDDTESSIAE 271 >gi|302866037|ref|YP_003834674.1| family 3 extracellular solute-binding protein [Micromonospora aurantiaca ATCC 27029] gi|315502596|ref|YP_004081483.1| extracellular solute-binding protein family 3 [Micromonospora sp. L5] gi|302568896|gb|ADL45098.1| extracellular solute-binding protein family 3 [Micromonospora aurantiaca ATCC 27029] gi|315409215|gb|ADU07332.1| extracellular solute-binding protein family 3 [Micromonospora sp. L5] Length = 311 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 46/233 (19%), Positives = 84/233 (36%), Gaps = 7/233 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + + IK G + G+ A G GFD++ + ++S + DP+KI Sbjct: 58 ANVAGSPAFEKIKSAGKVVIGVKFDQPNLGYKDAQGKRCGFDIEIAQYVASTLGVDPAKI 117 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGI 137 +Y + + R A++ +ID T R ++F + GQ ++ K I Sbjct: 118 EYKEIASANRETAIKGGEIDYYVGTYSITDKR--KNDVSFAGPYFVAGQDLLVRKDESSI 175 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + L G +C G+T + D + + F+ E + + DA T D Sbjct: 176 TGKDTLKGKKVCSATGSTPIQKIRDEGLTEG--ENIVEFKTYSECVSQLLDKKVDAVTTD 233 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + L P E ++ S + + D + V+ A T Sbjct: 234 DAILKGYAAQ--NPDELKVVGQPFSTEKYGIGLPKDDKALRDYVNDQIEAAFT 284 >gi|227508309|ref|ZP_03938358.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227192198|gb|EEI72265.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 282 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 60/259 (23%), Positives = 104/259 (40%), Gaps = 24/259 (9%) Query: 1 MYKDFF------VSILCLIILFFTSFSTNASILG-------DIKKRGFLKCGINTGLVGF 47 M K + VS+L ++L + + IKK+G ++ + L + Sbjct: 1 MKKHWLTKLIAVVSVLATLLLVLSGCGNSKKSSSNNPSSVSQIKKKGTIRVAVFGDLPPY 60 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 V +G G+DV ++ + ++++ +NA R AL S ++D++ N T Sbjct: 61 GWVNKDGKRVGYDVKLAHQVAKDLGVK---VKFVQVNANNRVDALNSNKVDLVLANFTVT 117 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R ++F G + K K I+ VSQL ++ V GTT E +YF + Sbjct: 118 PER--KQVVSFAKPYMKVSVGVVSPKNKPITKVSQLQNKNVIVTKGTTAE----NYFTSK 171 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + F+ + A + R A D S LYA + V + I KS +A Sbjct: 172 QPNVKLLKFDSKTQQFNALKNGRGVALADDNSYLYAW--SKSNSKYTVGIKSIGPKSYIA 229 Query: 228 PAIIQGDTEWYNIVSWTHY 246 PA+ +G+ N + Sbjct: 230 PAVKKGNKSLLNWTNKEIT 248 >gi|253689675|ref|YP_003018865.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756253|gb|ACT14329.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 268 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 99/265 (37%), Gaps = 17/265 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K ++++ +L + S A L DI+KRG L+ + F V + +G+D+ Sbjct: 8 IKKGLLAVMGAAMLLVQAGSAMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 67 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D R L+ + K+Q +P+ + R LQ+ ++D++ + RE + F Sbjct: 68 DIARYLAKEM---KLKLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREKV--IDFSRA 122 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G K ++S L G SI V G ++ L D +E Sbjct: 123 YAPFFLGVFGPKDSTLTSSDALEGKSIGVTRGAVEDMVLTDIAPKA---AQIKRYEDNNT 179 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +AY + + + + A+ P++ + ++ SP + + + V Sbjct: 180 TLSAYLSGQVEYVATGNLVVAAIAEQ--NPTKAPVAKFMLKDSPCYIGLKKDEPALKAKV 237 Query: 242 SWTHYAMVTAEELGITQKNINQVSK 266 E + +N +S+ Sbjct: 238 DALI-------EQALKDDTLNSLSE 255 >gi|28869961|ref|NP_792580.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213967002|ref|ZP_03395152.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|301385186|ref|ZP_07233604.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302062754|ref|ZP_07254295.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato K40] gi|302130127|ref|ZP_07256117.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28853206|gb|AAO56275.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213928324|gb|EEB61869.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|330965316|gb|EGH65576.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. actinidiae str. M302091] gi|331014305|gb|EGH94361.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 283 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 97/252 (38%), Gaps = 4/252 (1%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + L T + S L + KRG L G + + A+G +GFD+D Sbjct: 9 KACAFVLAASFSLANTVQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDID 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R ++ +F+DPSK++++ ++ R L + ++DI + T R + +AF Sbjct: 69 IGRIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPY 126 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y +G ++ + L A V + + K ++ V+ + Sbjct: 127 YREGVALLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + R D D S+ L P + S A A+ +GD +W N V+ Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVN 244 Query: 243 WTHYAMVTAEEL 254 + +T E Sbjct: 245 TALHEAMTGVEF 256 >gi|307701962|ref|ZP_07638970.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus mitis NCTC 12261] gi|307616607|gb|EFN95796.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus mitis NCTC 12261] Length = 279 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 90/250 (36%), Gaps = 13/250 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K + ++ L+ LF T+ + AS +++G + G + V + NG + Sbjct: 4 KKIALVLVSLLTLFLTACTQKASDPKKDNWDKYQEQGTITIGFDNTFVPMGFEEKNGQYT 63 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+S + +Q+ P++ + LQ+ ID + T R +A Sbjct: 64 GFDIDLAQAVSEKLGVK---VQFQPIDWDMKETELQNGTIDAIWNGYAATDER--REKVA 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 F + Q + K + I SV + ++ QAG++ L D K Sbjct: 119 FSIPYMENQQVLVAKKSQQIRSVEDMKDKTLGAQAGSSGYLDFEAQPDLLKNRVKDQKAN 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 ++ E + R DA D + S++ + A + D Sbjct: 179 QYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILSDYNVFSAGFESESFAVGVRPAD 238 Query: 235 TEWYNIVSWT 244 ++ Sbjct: 239 KRLLQALNQA 248 >gi|312897774|ref|ZP_07757190.1| bacterial extracellular solute-binding protein, family 3 [Megasphaera micronuciformis F0359] gi|310621158|gb|EFQ04702.1| bacterial extracellular solute-binding protein, family 3 [Megasphaera micronuciformis F0359] Length = 265 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 36/247 (14%), Positives = 89/247 (36%), Gaps = 9/247 (3%) Query: 1 MYKDFFVS-ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + I+ + + T ++++ K + G++ +G+ G Sbjct: 3 MKKWILAATIMTMTAMLATGCGSDSAKSEQ-KLPDKVIIGLDDNFPPMGFRDESGNLVGS 61 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + + + + +++ P++ + AL+SKQ+D+L T R+ + F Sbjct: 62 DIDLAKEAAKRLGIE---VEFKPIDWDSKEAALKSKQVDMLWNGLSITEDRKKEIA--FS 116 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +GQ ++ ++ + L+G ++ Q G+++ L + ++ Sbjct: 117 DAYMKNGQIIVVRSDSPVTDRAGLAGKTLATQDGSSSIDCLNKAADFKASLGNVKLYGDN 176 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA D S + ++ + + + Q DT + Sbjct: 177 VAALMDLELGRVDAVLVDSS--VGRYYMQKKQGVFKVIDKNMGEEEFGVGMRQEDTLLRD 234 Query: 240 IVSWTHY 246 ++ Sbjct: 235 KLNSVLK 241 >gi|253681643|ref|ZP_04862440.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Clostridium botulinum D str. 1873] gi|253561355|gb|EES90807.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Clostridium botulinum D str. 1873] Length = 268 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 87/253 (34%), Gaps = 18/253 (7%) Query: 1 MYKDF---FVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K ++ + L++L S S + L +KK G L+ G++ Sbjct: 1 MKKIISCVLITTIGLMLLAGCSSLGKQSGEDNSLKCVKKLGKLRIGLDDSYPPMEFRDEK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFD+D ++ + ++++ L LQSK+ D + T R+ Sbjct: 61 NNLVGFDIDLSNEIAKRLGVK---VEFVTTEFSGILLGLQSKKFDAIIAGFSITEDRKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F GQ + K I +S L + Q G+ + K Sbjct: 117 -SVNFSEPYILGGQVIAVKKGNTSIKKLSDLKDKIVGCQMGSNGQHCAEKNLKEIK---E 172 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + ++ + + R DA D A + E +L +++ K P+ A Sbjct: 173 LRKYSKIPQAFSDMAIGRIDAVIMD--AQVGGYYLSKNTGEFEVLNEMVVKQPMGIAFKM 230 Query: 233 GDTEWYNIVSWTH 245 GD N V Sbjct: 231 GDNSLKNEVQKII 243 >gi|186682192|ref|YP_001865388.1| extracellular solute-binding protein [Nostoc punctiforme PCC 73102] gi|186464644|gb|ACC80445.1| extracellular solute-binding protein, family 3 [Nostoc punctiforme PCC 73102] Length = 322 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 94/249 (37%), Gaps = 11/249 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + +I LI+ A + + + G L G + + FA + G G+ Sbjct: 23 KSKIYSAIFGLILSVSLPGVAGAETVMQKVARTGVLTAGTSRDALPFAYSDSQGKLIGYS 82 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 VD + + +++ + + ER + ++Q+DI+ + +T R+ + Sbjct: 83 VDMLTLIQKQLEKELGKKIQLKLVGVTPAERIPKIINRQVDIICDASSFTWERDK--KID 140 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F G ++ K + S L + V AGTT E T+ + + F+ Sbjct: 141 FSVSYGVTGTQILIKKDSNLGSPESLINKRVGVLAGTTNEETIKQV----QTQAKLVYFK 196 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTE 236 E AA + DA+ D L T I P S+ +A + + +++ Sbjct: 197 TRAEGFAALEQGKIDAFASDSIILEGWLQTAKNQDSFAIAPPRPYSREGIACMVPENNSK 256 Query: 237 WYNIVSWTH 245 + + V+++ Sbjct: 257 FLDSVNYSL 265 >gi|55823397|ref|YP_141838.1| amino acid (glutamine) ABC transporter substrate-binding protein [Streptococcus thermophilus CNRZ1066] gi|55739382|gb|AAV63023.1| amino acid (glutamine) ABC transporter substrate-binding protein [Streptococcus thermophilus CNRZ1066] Length = 264 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 82/251 (32%), Gaps = 14/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 M K F ++ L+ + + + IK+ L ++ F V Sbjct: 1 MKKLFLGAMAFLVAVTLVACGSKKDADESIKENKKLVVAVSPDYPPFEFKTLVDGKDQVV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D+ +A+++ + ++ ++ +LQS + D+ T R+ + Sbjct: 61 GSDIKLAQAIANELGVK---LEVTTMSFDNVLSSLQSGKADLAISGISVTDERKKT--FD 115 Query: 118 FRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K + SS+ L G + VQ GT E K I Sbjct: 116 FSDPYYETQNAIIVRKGQESTYSSLDALKGKKVAVQKGTIEEGLAKKQLK----DSTVIS 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E ++ + DA + N + + + A A+ +G+ Sbjct: 172 LTAMGEAINEVKSGQVDAVDLEKPVAEGYVAQNSDLTLASVALKVDDGDAKAVAMTKGND 231 Query: 236 EWYNIVSWTHY 246 + V+ Sbjct: 232 KLKEAVNKVIK 242 >gi|107101631|ref|ZP_01365549.1| hypothetical protein PaerPA_01002675 [Pseudomonas aeruginosa PACS2] Length = 268 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 94/246 (38%), Gaps = 14/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M K + + + L S A L DI+K G L+ F V A +G Sbjct: 1 MKK---LPAITALALALISGLAQADRLEDIRKAGVLRVASFDSNPPFGFVDAKSKQIEGL 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + ++Q LP N R L + ++D++ N T R + + F Sbjct: 58 DVDYAKALADKLG---VRLQVLPTNPANRIPLLTANKVDLVLANFTITPER--AQQVDFS 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI+ K ++S L+ + V GT E L + F I ++ Sbjct: 113 IPYFSSGQQFIVKKG-TLTSPEVLNKWRVGVDKGTVNEGVLREKFP----GAKVIAYDDT 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R + A T D L L ++ + P IS + I +G+ Sbjct: 168 PFAFTALRNGQVQAITQDGPKLIGLLANVPDRDKYEVPPFTISNDLIGVGIPKGEKSLTE 227 Query: 240 IVSWTH 245 V + Sbjct: 228 FVDKSL 233 >gi|154148664|ref|YP_001406796.1| amino acid [Campylobacter hominis ATCC BAA-381] gi|153804673|gb|ABS51680.1| amino acid [Campylobacter hominis ATCC BAA-381] Length = 268 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 79/206 (38%), Gaps = 19/206 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFA-EVKANGDWKGF 59 M K V +C LF L IK++G + G+ F V G ++GF Sbjct: 1 MKKIILVLGICFCALF-------GDSLDQIKQKGVFRVGVYESQPPFEKFVD--GKFEGF 51 Query: 60 DVDFCRALSSAIFD-DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 ++D +++ +F + ++++ + AK+R ALQ +ID + N T R + F Sbjct: 52 EIDLANSIAKDLFGENGGTVEFVIITAKDRIPALQQNKIDAVIANYTVTDERAK--SVDF 109 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G + K I+S +L I + GTTTE L + Sbjct: 110 TMPYFAVNTGILTRKNDNITSPLELRDTPIICEKGTTTEEYLQ------KNDFKIEYCNS 163 Query: 179 VEEIDAAYRAHRCDAYTGDISALYAL 204 E R + AY D + A Sbjct: 164 AVECYKMVRDGKAKAYAADNIVVLAY 189 >gi|148926602|ref|ZP_01810284.1| probable ABC-type amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845296|gb|EDK22390.1| probable ABC-type amino-acid transporter periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 264 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 60/245 (24%), Positives = 95/245 (38%), Gaps = 10/245 (4%) Query: 2 YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K + + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 9 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 68 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ I D KI+ + +NAK R L + +D + T R+ F Sbjct: 69 FEVDVAKLLAKNILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 126 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y D G ++ K+K S++ + GA+I V TT+ + K + F Sbjct: 127 SEPYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAIGKAAKKIGIDVKFSEFPD 186 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I AA A R DA++ D S L ILPD + D + Sbjct: 187 YPSIKAALDAKRVDAFSVDKSILLGYVDDKS-----EILPDSFEPQSYGIVTKKDDPAFA 241 Query: 239 NIVSW 243 V Sbjct: 242 KYVDD 246 >gi|291288059|ref|YP_003504875.1| extracellular solute-binding protein family 3 [Denitrovibrio acetiphilus DSM 12809] gi|290885219|gb|ADD68919.1| extracellular solute-binding protein family 3 [Denitrovibrio acetiphilus DSM 12809] Length = 270 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 88/251 (35%), Gaps = 15/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K ++ + + N+ S L + KRG L+ G+ G + F G+ Sbjct: 1 MKKIVVTLLVFAMACVTAFANDNSLWEKSTLNQVLKRGELRVGMEAGYMPFELKNKKGEI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD + L+ + + + +L + + DI+ T R +L + Sbjct: 61 IGFDVDMAKELAKEMGVK---LTLVNTAWDGIISSLLTDKYDIIMSGMTITPQR--NLQV 115 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F GQ ++ K+ I S L+ V A K + Sbjct: 116 NFADPYIVVGQTILIRKELAGKIKSYKDLNDPKYTVATKLGVTGDYA--TKKYIGNAKIN 173 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +FE +E + DA+ D+ Y L + PLA AI +GD Sbjct: 174 LFETEQEGAMEVVNGKADAFVYDLP--YNSLYFAQNSKNLAFLNVPFTYEPLAWAIRKGD 231 Query: 235 TEWYNIVSWTH 245 ++ N ++ Sbjct: 232 PDFMNFLNNIL 242 >gi|170749962|ref|YP_001756222.1| extracellular solute-binding protein [Methylobacterium radiotolerans JCM 2831] gi|170656484|gb|ACB25539.1| extracellular solute-binding protein family 3 [Methylobacterium radiotolerans JCM 2831] Length = 301 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 79/226 (34%), Gaps = 7/226 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQY 80 L I L G+ F+ + N GF VD C ++ A+ + ++ Sbjct: 24 GTLKKIHDNNRLVLGVRDTATPFSYLDQNQKVVGFAVDICLRIADAVKRELKMPGLEVGM 83 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +N+ R + + +D+ T R+ + F + F+ K + I+ + Sbjct: 84 EFVNSSSRIPLMTNGTVDLECGTTTNNAERKK--QVDFTNTHFLTATRFVSRKDQHIAGL 141 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G ++ AG+T L L + I + V E R A+ D Sbjct: 142 DDLRGKTVSSVAGSTNILMLIKANNERKLGITVIAAKDVPEGFLMVETGRAAAFVMDDVQ 201 Query: 201 LYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWTH 245 L + + P+ +V+ + + P + + D + +V Sbjct: 202 LSVIAAQSKEPAAYVVSEETLSNPEPYGIMLRKDDPAFKAVVDRAT 247 >gi|225352764|ref|ZP_03743787.1| hypothetical protein BIFPSEUDO_04394 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156371|gb|EEG69940.1| hypothetical protein BIFPSEUDO_04394 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 275 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 91/251 (36%), Gaps = 15/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + +F S G ++ GI G +G + GFD Sbjct: 6 MLRRVIATFCACACVFAVSACGADD------ADGKIRVGIKFDQPGLGFK-KSGTYVGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + +I + +K+R LQ+ +D + T R+ ++F Sbjct: 59 VDVAKYIAKKLGYSEDQIVWKEAPSKQREAMLQNGDVDFIVATYSITDERKKV--VSFAG 116 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ ++ K I+ L+G +C G+T+ +T+ + F + + Sbjct: 117 PYFVAGQDLLVRKDETSINGPEDLNGKRLCSVTGSTSAVTVKEKFA---NEVQLMEQPGY 173 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + DA T D L L + ++ ++ I +GDT+ Sbjct: 174 AECATALFSGIVDAVTTDDIILAGLASASR--GRLRVVGKPFTQEYYGVGIKKGDTKLAT 231 Query: 240 IVSWTHYAMVT 250 ++ M+ Sbjct: 232 QINNAIADMIQ 242 >gi|256375586|ref|YP_003099246.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] gi|255919889|gb|ACU35400.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] Length = 295 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 84/243 (34%), Gaps = 15/243 (6%) Query: 16 FFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67 S + A +K RG + G+ A + GFDVD R + Sbjct: 31 AAPSQAAEADVKVDGSTTFEKMKSRGKVVIGVKEDQPNLGFKDATTNKYSGFDVDIARLV 90 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++ + D SKI+Y + + R AL + +D R+ +AF + GQ Sbjct: 91 AAKLGFDESKIEYKAIASAGREQALINGDVDYYVGTYTINDGRKE--KIAFAGPYFVAGQ 148 Query: 128 GFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++ K + L G +C G+T + D + + F+ + + Sbjct: 149 DLLVRKDDASITGKDTLMGKKVCSVTGSTPIKRIKD--EKLTEDANITEFQNYSQCVSKL 206 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 DA T D + L P + ++ SK P + + D + V+ Sbjct: 207 AEGAVDAVTTDDAILKGYAAQ--EPDKFKVVGAPFSKEPYGIGLNKEDKPLRDKVNDILQ 264 Query: 247 AMV 249 A + Sbjct: 265 AAM 267 >gi|256380783|ref|YP_003104443.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] gi|255925086|gb|ACU40597.1| extracellular solute-binding protein family 3 [Actinosynnema mirum DSM 43827] Length = 275 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 104/257 (40%), Gaps = 10/257 (3%) Query: 2 YKDFFVSILCLIILFFTSF--STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 Y+ ++I +L T+ S + S L G L GI L G ++ + +G++ GF Sbjct: 3 YRKLVMAITGSAVLAATAACGSADQSTLEGKADDGALTIGIRYDLPGMSQRRIDGEFVGF 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD + +++ P+ I + + +R + S ++D++ N T R+ +G F Sbjct: 63 DVDVAKYVAAQFDVQPAGITWREVRPADREKLIASGEVDLVVANYSITEPRKQQVG--FA 120 Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + GQG ++ + I+ LSG +C GTT+ + + F + + + Sbjct: 121 GPYFQTGQGLLVRATEEAITGTEALSGKKLCSVTGTTSAAKVKEEFAQ---DVELVEYGQ 177 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A A + DA T D + L P ++ + + + + D Sbjct: 178 YSDCVTALLAEKVDAVTTDEAILTGFVGQ--NPELLKLVGEPFTTERYGIGLAKDDAAGR 235 Query: 239 NIVSWTHYAMVTAEELG 255 V+ MV+ E Sbjct: 236 GKVASAIEKMVSTGEWK 252 >gi|49082882|gb|AAT50841.1| PA2204 [synthetic construct] Length = 269 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 94/246 (38%), Gaps = 14/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M K + + + L S A L DI+K G L+ F V A +G Sbjct: 1 MKK---LPAITALALALISGLAQADRLEDIRKAGVLRVASFDSNPPFGFVDAKSKQIEGL 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + ++Q LP N R L + ++D++ N T R + + F Sbjct: 58 DVDYAKALADKLG---VRLQVLPTNPANRIPLLTANKVDLVLANFTITPER--AQQVDFS 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI+ K ++S L+ + V GT E L + F I ++ Sbjct: 113 IPYFSSGQQFIVKKG-TLTSPEVLNKWRVGVDKGTVNEGVLREKFP----GAKVIAYDDT 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R + A T D L L ++ + P IS + I +G+ Sbjct: 168 PFAFTALRNGQVQAITQDGPKLIGLLANVPDRDKYEVPPFTISNDLIGVGIPKGEKALTE 227 Query: 240 IVSWTH 245 V + Sbjct: 228 FVDKSL 233 >gi|15597400|ref|NP_250894.1| binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|218891843|ref|YP_002440710.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254235230|ref|ZP_04928553.1| hypothetical protein PACG_01121 [Pseudomonas aeruginosa C3719] gi|254240626|ref|ZP_04933948.1| hypothetical protein PA2G_01285 [Pseudomonas aeruginosa 2192] gi|296389383|ref|ZP_06878858.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa PAb1] gi|313110962|ref|ZP_07796802.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] gi|9948227|gb|AAG05592.1|AE004647_1 probable binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|126167161|gb|EAZ52672.1| hypothetical protein PACG_01121 [Pseudomonas aeruginosa C3719] gi|126194004|gb|EAZ58067.1| hypothetical protein PA2G_01285 [Pseudomonas aeruginosa 2192] gi|218772069|emb|CAW27848.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|310883304|gb|EFQ41898.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] Length = 268 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 94/246 (38%), Gaps = 14/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M K + + + L S A L DI+K G L+ F V A +G Sbjct: 1 MKK---LPAITALALALISGLAQADRLEDIRKAGVLRVASFDSNPPFGFVDAKSKQIEGL 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + ++Q LP N R L + ++D++ N T R + + F Sbjct: 58 DVDYAKALADKLG---VRLQVLPTNPANRIPLLTANKVDLVLANFTITPER--AQQVDFS 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI+ K ++S L+ + V GT E L + F I ++ Sbjct: 113 IPYFSSGQQFIVKKG-TLTSPEVLNKWRVGVDKGTVNEGVLREKFP----GAKVIAYDDT 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R + A T D L L ++ + P IS + I +G+ Sbjct: 168 PFAFTALRNGQVQAITQDGPKLIGLLANVPDRDKYEVPPFTISNDLIGVGIPKGEKALTE 227 Query: 240 IVSWTH 245 V + Sbjct: 228 FVDKSL 233 >gi|227355083|ref|ZP_03839494.1| ABC superfamily ATP binding cassette transporter, binding protein [Proteus mirabilis ATCC 29906] gi|227164870|gb|EEI49717.1| ABC superfamily ATP binding cassette transporter, binding protein [Proteus mirabilis ATCC 29906] Length = 279 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 64/328 (19%), Positives = 108/328 (32%), Gaps = 66/328 (20%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + L + F+ A L DIK+ G ++ I F + G+ Sbjct: 1 MKLRVLATALIAGSVLFSGL-AKADKLDDIKQAGVVRIAIFDSNPPFGFIDPQTKKLAGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D D ++ + ++ P N R L +K++D+++ N T R + F Sbjct: 60 DADIANEIAKDLGVK---LELRPTNPANRIPLLNAKKVDLIAANFTITEERAK--QVDFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K ++S Q++ I GT E+TL + + I ++ Sbjct: 115 VPYFATGQKFIARKG-VLTSPEQIASLRIGADKGTVQEITLRERYPE----TKVISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237 AA R A T D + L L + I P I++ A A +G+ Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLANLPEKIKADFEISPFSITREYQAVAAAKGEQRL 229 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 N ++ T L L K+ Sbjct: 230 INEINNTL-------------------------------------------LRLEKE--- 243 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRG 325 G E+++R G ++ PRG Sbjct: 244 ------GKADEIYNRWFGPDTKSAQPRG 265 >gi|186471953|ref|YP_001863271.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184198262|gb|ACC76225.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 262 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 62/314 (19%), Positives = 99/314 (31%), Gaps = 63/314 (20%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSA 70 + ++ S + A L DIKK G L+ F V G DVD+ RA+++ Sbjct: 1 MGLMLAISSAVRADRLDDIKKAGVLRVATFDSNPPFGFVDPKSNQIVGLDVDYARAVANK 60 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + ++ P N R L+S ++D++ N T R+ + F + G FI Sbjct: 61 LGVK---LEIQPTNPANRIAFLKSGKVDLVFANFTITDERKK--EVDFSTPYFASGTQFI 115 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 K + + QL+ I GTT E + F + ++ AA R Sbjct: 116 AKKG-VLKTPQQLNSLRIGADKGTTNEQQVRAQFP----GATIVAYDDTPFAFAALRTGN 170 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 T D L AL + I IS + +G+T N+V T Sbjct: 171 VQVITQDGPKLVALLANVPDKGSYEISAFTISNDYEGVGVPKGETRLLNLVDDTLRG--- 227 Query: 251 AEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMF 310 + G G+++ Sbjct: 228 -------------------------------------------------LEANGTAGKIY 238 Query: 311 DRNLGNQSELKIPR 324 D G S +PR Sbjct: 239 DAWFGPASRAPLPR 252 >gi|27379495|ref|NP_771024.1| substrate-binding protein [Bradyrhizobium japonicum USDA 110] gi|27352647|dbj|BAC49649.1| bll4384 [Bradyrhizobium japonicum USDA 110] Length = 302 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 78/226 (34%), Gaps = 7/226 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFDDPSKIQY 80 L IK+ G + G+ V F+ + G+ +D C + + + D + Sbjct: 25 GTLKKIKETGAITLGVRDSAVPFSYIDEKQKTVGYAIDICMKIVEEIKAELKLDKLAVNE 84 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + R + + ID+ +T + + F + F+ K + V Sbjct: 85 NLVTSSNRIPLMANGTIDLECGSTTNNA--DRQKQVWFTNTHFLTASRFVSKKASKLDQV 142 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G ++ AGTT L A + + + + V E R +A+ D Sbjct: 143 DDLKGKAVVSVAGTTNITQLNKANAARALGINVMNAKDVPEAFLMVETDRAEAFVMDDIQ 202 Query: 201 LYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIVSWTH 245 L A+ + PS + I P + + D ++ +V Sbjct: 203 LAAMIASAKDPSLYAISSGAFSDPEPYGIMLRKDDAQFKAVVDRAT 248 >gi|322516343|ref|ZP_08069269.1| polar amino acid uptake family ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] gi|322125181|gb|EFX96570.1| polar amino acid uptake family ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] Length = 264 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 77/251 (30%), Gaps = 14/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 M K F ++ L + + + IK+ L ++ F V Sbjct: 1 MKKLFLGAMALLAAVTLVACGSKKDAYESIKENKKLVVAVSPDYAPFEFKTLVDGKDQVV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D+ +A++ + ++ ++ +LQS + D+ T R+ + Sbjct: 61 GSDIKLAQAIADELGVK---LEVTTMSFDNVLSSLQSGKADLAISGISVTAERKKT--FD 115 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K S+ G + VQ GT E K + Sbjct: 116 FSDPYYETQNAIIVRKDQESTYPSLDAFKGKKVAVQKGTIEEGLAKKQLK----DSTVVS 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E ++ + DA + N + + + A A+ +G+ Sbjct: 172 LTAMGEAINEVKSGQVDAVDLEKPVAEGYVAQNPDLALASVALKVDDGDAKAVAMAKGND 231 Query: 236 EWYNIVSWTHY 246 + V+ Sbjct: 232 KLKEAVNKVIK 242 >gi|291444634|ref|ZP_06584024.1| sugar-binding protein [Streptomyces roseosporus NRRL 15998] gi|291347581|gb|EFE74485.1| sugar-binding protein [Streptomyces roseosporus NRRL 15998] Length = 332 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 84/242 (34%), Gaps = 15/242 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73 + + + IK+RG L G++ + +GD +GFD+D RA++ + Sbjct: 57 ASLPASGDDGPNIDKIKERGKLIAGVDQNSFRWGYRNPESGDLEGFDIDLVRAIADDLLG 116 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DP + + + +R AL++ ++D++ R R ++F + GQ + K Sbjct: 117 DPDAVIFRAIPTNQRIAALENDRVDVVVRTMTINCKR--LEQVSFSTAYFQAGQQVLAPK 174 Query: 134 KKGISSVS-QLSGASICVQAGTTTELTL---------ADYFKAHNMKYHPIVFERVEEID 183 + I+ L G +C G+T L D F + + Sbjct: 175 ESPITGYDSSLKGKRVCSAEGSTAYEALEKKSFGALYKDDFDGTERDPDLLTVPNQLDCL 234 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + DA D + P+ + D + A +G + V+ Sbjct: 235 VRLQLGEVDAVVTDNALAAGQAAQ--DPAVELKGKDPFTTEYYGVATKKGSDDLVARVNK 292 Query: 244 TH 245 Sbjct: 293 VL 294 >gi|256847116|ref|ZP_05552562.1| ABC transporter solute-binding component [Lactobacillus coleohominis 101-4-CHN] gi|256715780|gb|EEU30755.1| ABC transporter solute-binding component [Lactobacillus coleohominis 101-4-CHN] Length = 284 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 66/260 (25%), Positives = 104/260 (40%), Gaps = 25/260 (9%) Query: 1 MY---KDFFVSILCLIIL-----------FFTSFSTNASILGDIKKRGFLKCGINTGLVG 46 M K L I + + ++N S + IKKRG LK + L Sbjct: 1 MKFNWKKLIAGALATISIAALAATAAVRPTTVNAASNPSSVSAIKKRGVLKVAVFGDLPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + V +G G+DV R ++ + ++++ +NA R L S + DI+ N Sbjct: 61 YGWVNKDGKRVGYDVALARQMAKDLGVK---VKFVQVNANNRVDTLNSNKADIVLANFTV 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + F G + KKK I+ VSQL G + V GTT E +YF + Sbjct: 118 TSERK--QVVDFAKPYMKVSVGVVSPKKKAITKVSQLKGKKVIVTKGTTAE----NYFTS 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + F+ + A + +R A D S LYA + P V + I K + Sbjct: 172 KQKGVSLLKFDSKTQQFNALKNNRGAALADDNSYLYAW--VKNNPKYTVGIKSIGPKQYI 229 Query: 227 APAIIQGDTEWYNIVSWTHY 246 APA+ +G+ N + Sbjct: 230 APAVKKGNKSLLNWSNQEIT 249 >gi|46190617|ref|ZP_00121269.2| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Bifidobacterium longum DJO10A] Length = 280 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 11/228 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 +S + A L +IKK G +K + + F V +G ++G+DV F L+ + +P Sbjct: 25 TSSSANAKARSLDEIKKSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAEQLAKDLGVEP 84 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 Y ++ R L S ++D++ N T R+ + F G + + Sbjct: 85 E---YTSVDPAARVDVLTSNKVDLVLANFTVTDERKE--KVDFAKPYMKVALGVVSPESA 139 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ VSQL G ++ + GTT E +F+ + +++ + A R DA++ Sbjct: 140 QITDVSQLDGKTLIIAKGTTAET----WFEKNAPNVKLQKYDQYADAYNALLDGRGDAFS 195 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 D + + A V + + +APA+ +G+TE N V+ Sbjct: 196 TDNTEVLAWA--KSNKGFKVGITHLGDDDTIAPAVQKGNTELLNFVND 241 >gi|218516825|ref|ZP_03513665.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli 8C-3] Length = 279 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 98/258 (37%), Gaps = 6/258 (2%) Query: 1 MYKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M F ++ L+ S S L ++ RG L G + + A+ +G Sbjct: 1 MTISFRTGVISLVAAALLSTPVLAEGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD ++ A+F DP KI+Y+ ++ R + + ++DI + T R + +AF Sbjct: 61 FDVDMGHIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAF 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y +G G ++ + + L A + A + +E Sbjct: 119 TIPYYREGVGLMLKADGKYADYAALKAAGSSATISVLQNVYAETMVHAALPEATVDQYES 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 V+ I A + R DA D S+L P + + A A+ +GD +W Sbjct: 179 VDLIYQALESGRADAVATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWL 236 Query: 239 NIVSWTHYAMVTAEELGI 256 N V+ + +T E Sbjct: 237 NFVNTALHEAMTGVEFDF 254 >gi|197286727|ref|YP_002152599.1| amino acid ABC transporter substrate-binding protein [Proteus mirabilis HI4320] gi|194684214|emb|CAR45712.1| putative amino acid ABC transporter, substrate-binding protein [Proteus mirabilis HI4320] Length = 279 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 64/328 (19%), Positives = 108/328 (32%), Gaps = 66/328 (20%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + L + F+ A L DIK+ G ++ I F + G+ Sbjct: 1 MKLRVLATALIAGSVLFSGL-AKADKLDDIKQAGVVRIAIFDSNPPFGFIDPQTKKLAGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D D ++ + ++ P N R L +K++D+++ N T R + F Sbjct: 60 DADIANEIAKDLGVK---LELRPTNPANRIPLLSAKKVDLIAANFTITEERAK--QVDFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI K ++S Q++ I GT E+TL + + I ++ Sbjct: 115 VPYFATGQKFIARKG-VLTSPEQIASLRIGADKGTVQEITLRERYPE----TKVISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237 AA R A T D + L L + I P I++ A A +G+ Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLANLPEKIKADFEISPFSITREYQAVAAAKGEQRL 229 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 N ++ T L L K+ Sbjct: 230 INEINNTL-------------------------------------------LRLEKE--- 243 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRG 325 G E+++R G ++ PRG Sbjct: 244 ------GKADEIYNRWFGPDTKSAQPRG 265 >gi|326318774|ref|YP_004236446.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375610|gb|ADX47879.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 296 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 90/248 (36%), Gaps = 6/248 (2%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L + + +++A +L I G L FA A G G+ V+ C+ ++ Sbjct: 10 LLGVASLCCAVASHAGVLDRIASGGKLVVAYRDAASPFAFKDAGGRPAGYAVELCQRIAD 69 Query: 70 AI----FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A+ ++ YLP++ R A+ + D+ +T R +AF + Sbjct: 70 AVRRKTGRKDMEVAYLPVDLDNRMEAITQGRADLECGSTTNNAER--RQIVAFTIPHFIT 127 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G ++ I + + G + GTT + + ++ + I + Sbjct: 128 GTRLLVKASSPIDRIEDMGGHKLVSTRGTTALRAVQQLNRERALQINVIEAPDDQRAVDM 187 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 DA+ D LYA P ++ ++ LA + +GD E+ +V Sbjct: 188 VEKGEADAFAMDDVLLYAFAAGRPDPKALKVVGKFVTAEALAIMLPKGDPEFKKVVDDEM 247 Query: 246 YAMVTAEE 253 ++T E Sbjct: 248 RRLITTRE 255 >gi|90413901|ref|ZP_01221887.1| hypothetical binding protein component of ABC transporter [Photobacterium profundum 3TCK] gi|90325085|gb|EAS41595.1| hypothetical binding protein component of ABC transporter [Photobacterium profundum 3TCK] Length = 265 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 92/249 (36%), Gaps = 15/249 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + ++ ++ T IL DI K G L+ + G + F NG + GFD Sbjct: 1 MRKLLSGIVAAVALMSTSAAVTAGPILDDIAKSGELRVCFDAGYMPFEMKSKNGSFIGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + I L + + +++ R ++ + F Sbjct: 61 IDIGKQMARQMGVKYVPIN---TAWDGIIPTLLTGKCHMINAGMTINAQR--NMRVNFAD 115 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ +++ + I+S L+ +I + GTT E + + VF Sbjct: 116 PYIVIGQSILINPELEGEITSYKDLNDSKYTIATKLGTTGEQAIKRMISKAKLN----VF 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E + + DA+ D+ ND H L + PL AI QGD++ Sbjct: 172 ETQSDAVLEVANGKADAFIYDMPFNAIYASQNDGKVIH--LEQPFTYEPLGWAIAQGDSD 229 Query: 237 WYNIVSWTH 245 N ++ Sbjct: 230 MLNFLNNFL 238 >gi|303240910|ref|ZP_07327421.1| extracellular solute-binding protein family 3 [Acetivibrio cellulolyticus CD2] gi|302591496|gb|EFL61233.1| extracellular solute-binding protein family 3 [Acetivibrio cellulolyticus CD2] Length = 275 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 81/231 (35%), Gaps = 7/231 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 S S +K+ G L G++ N + G+D+D + ++S + + Sbjct: 29 ASSSVADQSWEKVKEAGVLVLGLDDSFPPMGYRDDNNEIVGYDIDLAKEVASRLGVE--- 85 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ P+N + L + ID + T ++ L F + Q ++ Sbjct: 86 LKLQPINWDSKEQELNTGNIDCVWNGFTMTD--DLKKNLLFSDAYMNNQQVLVVMADSKY 143 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +S + L+G S+ +Q+ ++ ++ L I + DA D Sbjct: 144 NSEADLAGKSVALQSDSSAKVALDSKTDFKASLKEVIELDNYTTCLMDLEKGGVDAVVMD 203 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + A + S++ ++ + ++ + D ++ T M Sbjct: 204 E--IVARYFIQMKGSKYKVIGNSLAAEEYGIGFRKADVALKTKINDTLKEM 252 >gi|242240518|ref|YP_002988699.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] gi|242132575|gb|ACS86877.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] Length = 278 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 99/260 (38%), Gaps = 19/260 (7%) Query: 4 DFFVSILCLIILFFTS--------FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 S+L L++L + + S L ++ +RG L+ G F NG Sbjct: 11 KVIASVLALLVLSGCTPTEEKKETSAAPQSALQNVLQRGTLRVGDCLSFAPFGFYDKNGA 70 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+DVD +AL+ A+ ++ + + R LQ+ ++D++ N L R +G Sbjct: 71 PDGYDVDLAKALAKAMGVK---LEMVNTTSANRIPNLQTNKVDVVFCNFTRNLERAKEIG 127 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + ++ K GI S ++G +I G+T D + + Sbjct: 128 --FTNPYVVASEAMLVRKNSGIQSAHDMAGKTIATVKGSTN----GDDVRNLGIDVKIQE 181 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + A + + DA D + L P+ V ++ A + QGD Sbjct: 182 YDSSQAAILAIKQGQADAMVEDNNFLAYQASL--DPTLIVTNEALVPLEYNAFGVKQGDQ 239 Query: 236 EWYNIVSWTHYAMVTAEELG 255 W + ++ + + + E Sbjct: 240 VWTHYLNEFLFEINASGENA 259 >gi|312863928|ref|ZP_07724166.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus vestibularis F0396] gi|311101464|gb|EFQ59669.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus vestibularis F0396] Length = 264 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 78/251 (31%), Gaps = 14/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 M K F ++ L + + + IK+ L ++ F V Sbjct: 1 MKKLFLGAMALLAAVTLVACGSKKDAYESIKENKKLVVAVSPDYAPFEFKTLVDGKDQVV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D+ +A++ + ++ ++ +LQ+ + DI T R+ + Sbjct: 61 GSDIKLAQAIADELGVK---LEVTTMSFDNVLSSLQAGKADIAISGISVTDERKKT--FD 115 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K SS+ G + VQ GT E K + Sbjct: 116 FSDPYYETQNAIIVRKDQESTYSSLDAFKGKKVAVQKGTIEEGLAKKQLK----DSTVVS 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E ++ + DA + N + + + A A+ +G+ Sbjct: 172 LTAMGEAINEVKSGQVDAVDLEKPVAEGYVAQNPDLALASVALKVNDGDAKAVAMAKGND 231 Query: 236 EWYNIVSWTHY 246 + V+ Sbjct: 232 KLKEAVNKVIK 242 >gi|329667258|gb|AEB93206.1| ABC transporter solute-binding component [Lactobacillus johnsonii DPC 6026] Length = 284 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 70/296 (23%), Positives = 119/296 (40%), Gaps = 38/296 (12%) Query: 1 MYKDFFV-------SILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGL 44 M K F+ IL + + T+ S N+S + IKKRG LK + L Sbjct: 1 MKKRKFIKKLIAAVGILAVGAVTLTACSNNSSSSSSSNNPSSVAAIKKRGTLKVAVFGDL 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 + V +G G+DV R L+ + ++++ +NA R L + + DI+ N Sbjct: 61 PPYGWVNKDGKRVGYDVRLARELAKEMGVK---VKFVQVNANNRVDTLNANKADIVLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + K K I++V+QL G + V GTT E +YF Sbjct: 118 TVTPERK--QVVDFAKPYMKVSVGVVSPKSKPITNVNQLKGKKVIVTKGTTAE----NYF 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + + F+ + A + R A D S LYA + P V + + S Sbjct: 172 TSKQPDVDLLKFDSKTQQFNAMKNGRAAALADDNSYLYAW--VKNNPKYTVGIKHLGPNS 229 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280 +APA+ +G+ + + I + N + + N +++ + G D Sbjct: 230 YIAPAVKKGNKSLLDWTNK-----------HINKLNKDGFFINDYNQELKPYFGDD 274 >gi|126659454|ref|ZP_01730588.1| hypothetical protein CY0110_20820 [Cyanothece sp. CCY0110] gi|126619290|gb|EAZ90025.1| hypothetical protein CY0110_20820 [Cyanothece sp. CCY0110] Length = 299 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 92/236 (38%), Gaps = 10/236 (4%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS 76 S IL IK+ G + G + FA + G+W G+ +D + I P Sbjct: 21 ASWAGEILEKIKETGVITAGTRKDAIPFAYINDEGEWVGYSIDVLEIIRQDIEKKLGKPI 80 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 +++ + + + RF +++++IDI ++ +T RE + F + G K Sbjct: 81 QLKLVEVTPQNRFDKVKNREIDIECASSTFTWEREEM--VDFSVSYFASGTKIFRKKGSD 138 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + ++ L+G I V TT E + A + + E +A G Sbjct: 139 LGTIDSLAGRRIGVIPNTTNEQAIKIQQPAA----ILVPIKDRNEGLEKLNNGEIEAIAG 194 Query: 197 DISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 D L L+L N + ++P+ A I + ++ W +V+++ + Sbjct: 195 DGIVLQGLRLENGNADKFEVVPEFPYMYEAYACMIPEDESAWRGMVNYSLVKFMEG 250 >gi|46578802|ref|YP_009610.1| amino acid ABC transporter periplasmic amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120603591|ref|YP_967991.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4] gi|46448214|gb|AAS94869.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120563820|gb|ABM29564.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio vulgaris DP4] gi|311232665|gb|ADP85519.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris RCH1] Length = 249 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 84/244 (34%), Gaps = 18/244 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F +++ ++L F S + + GI+ FA V +G GFD Sbjct: 1 MKRSFVYTVVMALVLAFASVAAA--------EEKTYINGIDANYPPFAYVDKDGKPAGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +++ + K+ + P++ +L +K+ID++ T R+ + F Sbjct: 53 VDSMNWIAAKMG---FKVVHKPMDWDGIVPSLLAKKIDMVCSGMSITDARKK--QITFSE 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q F+ K +S G + VQ GT+ L + ++ Sbjct: 108 PYWTVSQVFVAKKDSKLSVDDVYKGKKKLGVQRGTSEADALQKQAPEKGWNFELRFYDSA 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA + L A +P IL A DTE Sbjct: 168 PLAIEDVLNGRIDA--AGMDILPAEDAAAKKPV--KILGTFGEPEDFGVATRNEDTELRG 223 Query: 240 IVSW 243 ++ Sbjct: 224 KINE 227 >gi|307706788|ref|ZP_07643593.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] gi|307617873|gb|EFN97035.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] Length = 279 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 90/250 (36%), Gaps = 13/250 (5%) Query: 3 KDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K + ++ + LF T+ + +++G + G + V + NG + Sbjct: 4 KKIALVLVSFLTLFLTACTQKVSDPKQDNWNKYQEQGTITIGFDNTFVPMGFEEKNGQYT 63 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+S + K+Q+ P++ + LQ+ ID++ T R +A Sbjct: 64 GFDIDLAQAVSEKLG---FKVQFQPIDWDMKETELQNGTIDVIWNGYSATDER--REKVA 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 F + Q + K + I SV + ++ QAG++ L D K Sbjct: 119 FSIPYMENQQVLVAKKSQQIRSVEDMKDKTLGAQAGSSGYLDFEAQPDLLKNRVKDQKAN 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 ++ E + R DA D + +++ + P A + D Sbjct: 179 QYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILNDYNVFPAGFESESFAVGVRPAD 238 Query: 235 TEWYNIVSWT 244 ++ Sbjct: 239 KRLLQALNQA 248 >gi|213691643|ref|YP_002322229.1| extracellular solute-binding protein, family 3 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523104|gb|ACJ51851.1| extracellular solute-binding protein, family 3 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457730|dbj|BAJ68351.1| amino acid ABC transporter substrate binding component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 300 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 49/228 (21%), Positives = 94/228 (41%), Gaps = 11/228 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + + A L +IKK G +K + + F V +G ++G+DV F L+ + P Sbjct: 45 TSSGANAKARSLDEIKKSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAERLAKDLGVKP 104 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 Y ++ R L S ++D++ N T R+ + F G + + Sbjct: 105 E---YTSVDPAARVDVLTSNKVDLVLANFTVTEERKE--KVDFAKPYMKVALGVVSPQNA 159 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ V QL G ++ + GTT E +F+ + +++ + A R DA++ Sbjct: 160 PITDVGQLDGKTLIIAKGTTAET----WFEKNAPNVKLQKYDQYADAYNALLDGRGDAFS 215 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 D + + A V + + +APA+ +G+ E + V+ Sbjct: 216 TDNTEVLAWA--KSNKGFKVGITHLGDDDTIAPAVQKGNKELLDFVND 261 >gi|220909135|ref|YP_002484446.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC 7425] gi|219865746|gb|ACL46085.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7425] Length = 300 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 111/290 (38%), Gaps = 19/290 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + + ++L + S+L + K G L G + FA + G+ G+ V+ Sbjct: 4 KFACLGLATFLLLSCPGLAQAHSVLEKVVKSGVLTAGTSKDAFPFAYRDSQGNLTGYSVE 63 Query: 63 FCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + ++ + + P K++ + L+ +ER LQ +DI+ + +T RE + F Sbjct: 64 MLKLINEQVSKELNQPIKLELVALDPQERIAKLQQGAVDIVCDFSSFTWKREA--DVDFS 121 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G ++ + +S + L G I V GTT ++ L + + ++F+ Sbjct: 122 VSYAITGTRLLVKRNSPLSDPASLVGKRIGVLPGTTAQVAL----RKAQPQAQIVLFQDR 177 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A +A + DA+ D L + S +A + + ++ + + Sbjct: 178 NKAYQAIQAGQIDAFADDDVLLEDWLFRTKNDKTFQVASYPYSNEGVACMLPENNSTFRD 237 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL 289 V+++ + L N++ R+ G + + L Sbjct: 238 TVNYSLIRFMQGL-LTQKTPNVDLF---------DRWFGPQGIAPLTVDL 277 >gi|293602769|ref|ZP_06685209.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292818785|gb|EFF77826.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 260 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 88/248 (35%), Gaps = 10/248 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + LC + T+A L DI K G +K + F V ++ G+D Sbjct: 1 MNRRTLLLSLCTAASLLAAPLTHADTLDDIVKAGVIKIAVPQDFPPFGSVGSDMKPLGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + ++ +P+ + R LQ++++D++ + RE + F Sbjct: 61 IDTAALIAKQLGVK---LELVPVTSANRVPYLQTRKVDLVISSLGKNAEREK--AIDFSD 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G +SS + L+G +I V G ++ L+ A +E Sbjct: 116 AYAPFFNGVFGPADLKVSSAADLAGKTIGVTRGAVEDIELSKIAPA---SATLKRYEDNN 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + + A+ P + +I SP + + + + Sbjct: 173 GTITAFLSGQVPMIATGNVVAAAILAR--NPPKKPETKFLIKNSPCYIGMNKDEPKLRAK 230 Query: 241 VSWTHYAM 248 V+ A Sbjct: 231 VNDILAAA 238 >gi|228477200|ref|ZP_04061838.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus salivarius SK126] gi|228251219|gb|EEK10390.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus salivarius SK126] Length = 270 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 83/253 (32%), Gaps = 17/253 (6%) Query: 1 MY--KDFFVSILCLIIL-FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANG 54 M K + + + L + S++ + L +K +G L +N F Sbjct: 1 MKPWKKLLLGLASVFALTALAACSSSTNTLDKVKDKGTLTVALNPHFAPFEFKTIQDGKD 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D++ +A++ + +++ ++ ++QS + DI T R+ Sbjct: 61 TIVGADIEIAKAIADELGVK---VKFSEMSFDNVLASVQSGKADIAISGISATKERQKI- 116 Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y ++ K + S+ VQ G+ E KA+ + Sbjct: 117 -FDFSDTYYESETVLVVKKDATGTYKQTGDFAKKSVAVQKGSIQESI----AKANLSDAN 171 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + + E ++ + + + + N + I SK A A+ + Sbjct: 172 VVSLAQPGEAINELKSGQVEGVVLEKAIAQGYVDQNSDLAVSDITLKSDSKDAYAVAMPK 231 Query: 233 GDTEWYNIVSWTH 245 G + V+ Sbjct: 232 GSDKLKAKVNKVI 244 >gi|33601773|ref|NP_889333.1| putative amino acid ABC transporter solute-binding protein [Bordetella bronchiseptica RB50] gi|33576210|emb|CAE33289.1| putative amino acid ABC transporter solute-binding protein [Bordetella bronchiseptica RB50] Length = 263 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 9/252 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGDWKG 58 M K V + L + + + G++ + G Sbjct: 1 MKKITAVLLFSATALLSACGQGDDASSTASAPAASRKVVVGLDDNFPPMGFRDEKNELVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D + S + ++++ P++ + L K++D+L T R+ ++F Sbjct: 61 FDIDMAKEASRRLG---MQVEFKPIDWSAKEAELNGKRVDVLWNGLTITEERKK--NISF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q I+ I + + L+G + Q G++ + F Sbjct: 116 TAPYMANHQIIIVGSASPIKTKADLAGKVVGAQEGSSAVDAIKKDAPVAASLKEIKTFAD 175 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 A R DA D + L + R ++ +L + + + DTE Sbjct: 176 NVTALMDLAAGRLDAIVVDE--VVGRYLASKREGQYRVLEENFGTEDYGVGVRKDDTELL 233 Query: 239 NIVSWTHYAMVT 250 + T +M Sbjct: 234 AKLDKTLASMKE 245 >gi|227113607|ref|ZP_03827263.1| putative amino acid ABC transporter, substrate binding protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 268 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 92/244 (37%), Gaps = 10/244 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K ++++ +L + S A L DI+KRG L+ + F V + +G+D+ Sbjct: 8 IKKGLLAVMGAAMLLIQAGSAMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 67 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D R L+ + K+Q +P+ + R LQ+ ++D++ + RE + F Sbjct: 68 DIARYLAKEM---KLKLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREKV--IDFSRA 122 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G K ++S L G SI V G ++ L D +E Sbjct: 123 YAPFFLGVFGPKDSTLTSSEALEGKSIGVTRGAVEDMVLTDIAPKA---AQIKRYEDNNT 179 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +AY + + + + A+ P++ + ++ SP + + + V Sbjct: 180 TLSAYLSGQVEYVATGNLVVAAIAEQ--NPTKAPVAKFMLKDSPCYIGLKKDEPALKAKV 237 Query: 242 SWTH 245 Sbjct: 238 DALI 241 >gi|332108376|gb|EGJ09600.1| extracellular solute-binding protein family 3 [Rubrivivax benzoatilyticus JA2] Length = 300 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 89/254 (35%), Gaps = 7/254 (2%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 I L S T L IK + G+ F+ + N G+ VD C Sbjct: 9 LAVITLLAACGVASAQTPGDTLSRIKSTKTITLGVREAARPFSFLDENKRPVGYSVDLCL 68 Query: 66 A----LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 A L + ++QY ++ ER L +++ID+ +T T R +AF Sbjct: 69 AAVDELKRELKLPELQVQYKVVSGAERIPKLLAREIDLECGSTTNTKAR--QEQVAFSYT 126 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + + K ++++ L G + + GTT+E L + VF E Sbjct: 127 MFVAQMRVLTPKDTPVTTLKDLDGLPLALSKGTTSEK-LFTRLAETEVNLKLQVFPSNTE 185 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AA +A + A+ D + L L + + + +S P + D V Sbjct: 186 AYAALKAGKVRAFAQDDALLQGLASADGAADKFQLSTLALSVEPYGVMARKDDKALLAAV 245 Query: 242 SWTHYAMVTAEELG 255 T + + E Sbjct: 246 DRTLGRLYASGEAD 259 >gi|324997390|ref|ZP_08118502.1| putative glutamate binding protein [Pseudonocardia sp. P1] Length = 295 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 86/228 (37%), Gaps = 10/228 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + +++RG + G+ G A G++ GFD+D + ++ + P +I + Sbjct: 48 SPTFQAMQQRGRVVVGVKDDQPGLGFRDATTGEFSGFDIDVAKTVAGGLGFAPDQIDWKV 107 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVS 141 + + R ++ ++D R+ +G F Y GQG ++ I+ Sbjct: 108 VPSAAREDVIERGEVDYYVGTYTINDKRKQRVG--FAGPYYTAGQGLLVRADENEITGPQ 165 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G ++C G+T + D N+ + F+ + + DA T D + L Sbjct: 166 TLQGKTVCSVTGSTPIQRVRD----QNLTTSIVEFQTYTQCVDQLINGQVDAVTTDDAIL 221 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 P + ++ + S+ P + DT + V+ + Sbjct: 222 LGYASQ--NPEQLKVVGETFSEEPYGIGVPLNDTAFRTKVNDLLQTAI 267 >gi|227893075|ref|ZP_04010880.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ultunensis DSM 16047] gi|227865126|gb|EEJ72547.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ultunensis DSM 16047] Length = 273 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 92/250 (36%), Gaps = 14/250 (5%) Query: 2 YKDFFVS---ILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVK-ANGDW 56 K F+S I+ L + + +K+ + G+ F + +G Sbjct: 3 KKKLFLSTFFIILLSFMLTACSQNKKQTIYETVKENKTINWGVKADTPLFGSMSIKSGKV 62 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GF++D AL+ I +K ++ A + L+++ +D + T R+ + Sbjct: 63 NGFEIDLANALTHKILGKDAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPERKK--QV 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + GQ ++ I + L+ + V GTT+ AD K + K + + Sbjct: 121 DFSKPYFPAGQSVMVSDHSKIKNAKDLNKQKVLVVKGTTS----ADAVKKVSPKAEILQY 176 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + AA +A++ +A D L + ++ + P A+ +G + Sbjct: 177 DDYGQAFAALKANQGNALVTDNGILAG---ILRDNPGYRVVGGTFTNQPYGIAVDKGQST 233 Query: 237 WYNIVSWTHY 246 ++ Sbjct: 234 MMRKINLALN 243 >gi|238783035|ref|ZP_04627062.1| Extracellular solute-binding protein, family 3 [Yersinia bercovieri ATCC 43970] gi|238716036|gb|EEQ08021.1| Extracellular solute-binding protein, family 3 [Yersinia bercovieri ATCC 43970] Length = 284 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 58/310 (18%), Positives = 101/310 (32%), Gaps = 65/310 (20%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSK 77 S + +A L DIK+ G ++ + F + + G+DVD A++ + Sbjct: 24 SAAAHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQSKKLVGYDVDVANAIAKDLGVK--- 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ N R L SK++D+++ N T R + F + GQ FI HK + Sbjct: 81 VELRATNPANRIPLLTSKKVDLIAANFTITDERAK--EVNFSLPYFATGQKFIAHKG-VL 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + I GT E+TL +++ I ++ A R A T D Sbjct: 138 KTPEDIRKLRIGADKGTVQEITLREHYPTAK----VISYDDTPLAFTALRNGNVQAITQD 193 Query: 198 ISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L L + I P I+K I +G+ V+ T Sbjct: 194 DAKLVGLLGNLPAAQKADFEISPFSITKEYQGVGIPKGEERLTATVNET----------- 242 Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 + ++K + ++DR G Sbjct: 243 --------------------LVKLEKEGEAAK---------------------IYDRWFG 261 Query: 316 NQSELKIPRG 325 + PRG Sbjct: 262 PATNAAQPRG 271 >gi|313895964|ref|ZP_07829518.1| putative arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Selenomonas sp. oral taxon 137 str. F0430] gi|312975389|gb|EFR40850.1| putative arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Selenomonas sp. oral taxon 137 str. F0430] Length = 268 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 76/252 (30%), Gaps = 11/252 (4%) Query: 2 YKDFFVSILCL----IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K+ + ++L A+ +G + G++ + Sbjct: 3 RKNILTGVAAAMMSALLLTGCGGGDKAAAPAKDGDKGKIVVGLDDNFPPMGFKDEKNEIV 62 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD + + + + +++ ++ + L+S ++ IL D T R+ + Sbjct: 63 GFDVDLAKEAAKRLGRE---VEFKAIDWSSKEAELKSGRVQILWNGLDITEKRKE--NML 117 Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Q + K I+ L+G I Q+ +T E + + Sbjct: 118 FSDPYMDSQQVIFVRKGDTAITDEQSLAGKVIGTQSASTAEEYIDATDFYKKDVKEVKKY 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 R DA GD + E +P L A + +T Sbjct: 178 PDFVATFMDLENGRLDAVVGDRIVGRYYMSKHPDKIEERNIPIGPKGE-LGIAFAKDNTA 236 Query: 237 WYNIVSWTHYAM 248 + V M Sbjct: 237 LRDEVQKVMNEM 248 >gi|290473276|ref|YP_003466142.1| putative amino acid-binding protein (ABC superfamily, peri_bind) [Xenorhabdus bovienii SS-2004] gi|289172575|emb|CBJ79344.1| putative amino acid-binding protein (ABC superfamily, peri_bind) [Xenorhabdus bovienii SS-2004] Length = 282 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 58/243 (23%), Positives = 92/243 (37%), Gaps = 13/243 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFC 64 ++ L L S A L DIKK G ++ + F + G+DVD Sbjct: 9 VATVALLTSLALVSGVAKADKLDDIKKTGTVRIAVFDSNPPFGFIDPQTKKLAGYDVDIA 68 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 A++S + ++ P N R L SK+ID+++ N T R + F + Sbjct: 69 NAVASDLGVK---LELRPTNPANRIPLLSSKKIDLIAANFTITDERAK--QVNFSIPYFA 123 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 GQ FI K + + ++ I GT E+TL + + I ++ A Sbjct: 124 TGQKFIARKG-VLKTPDDIAKLRIGADKGTVQEITLRERYPTAK----VISYDDTPLAFA 178 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A R A T D + L L + I P I++ A A +G+ N V+ Sbjct: 179 ALRNGNVQAITQDDAKLVGLLANVPEAQKADFEISPFSITREYQAVAATKGEDRLINAVN 238 Query: 243 WTH 245 T Sbjct: 239 QTL 241 >gi|91789816|ref|YP_550768.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91699041|gb|ABE45870.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 268 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 94/257 (36%), Gaps = 12/257 (4%) Query: 2 YKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 K V+ + L +L + + +A + DI KRG +K G+ G V ++G+ G Sbjct: 4 KKILRVAAVGLTVLASVALTSTMASAQTVTDIIKRGKVKIGVLVGAPPMGAVDSSGNPVG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +D D ++ + ++ + L R AL+S ++D L T R + + F Sbjct: 64 YDADTAALIAKYLG---VPLEMVALEPPARIPALESGKVDFLVSTLAPTPERAKT--VMF 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G K + L G + V G++ E L + F+ Sbjct: 119 TIPYNAFQVGIYAKKALKVKDWGDLKGKKVGVNRGSSVEAALVKQEGLVG--LKVVRFDT 176 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A + + DA A + RP + L SK P + A+ + E Sbjct: 177 DAAVIQAVFSGQIDACA--EPDTMANQSLKARPDGDMALKFFFSKQPNSIAVRKDAFELQ 234 Query: 239 NIVSWTHYAMVTAEELG 255 ++ T Y + EL Sbjct: 235 QWLNNTIYYIKVNGELD 251 >gi|213421095|ref|ZP_03354161.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 262 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 79/224 (35%), Gaps = 6/224 (2%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLA 91 + G V F+ G+ D+ A+ + +++ +P+ ++ R Sbjct: 2 IVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEVVKKKLNKPDLQVKLIPITSQNRIPL 61 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 LQ+ D +T L R+ F + G + K I L G ++ V Sbjct: 62 LQNGTFDFECGSTTNNLERQKQAA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVT 119 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 +GTT+E+ L + M I + + + R A+ D + L + +P Sbjct: 120 SGTTSEILLHKLNEEQKMGMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKP 179 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 I+ S+ + + D E+ ++ T T+ E Sbjct: 180 DNWEIVGKPQSQEAYGCMLRKNDPEFKKLMDDTIAQAQTSGEAE 223 >gi|328948883|ref|YP_004366220.1| ABC transporter periplasmic protein family 3 [Treponema succinifaciens DSM 2489] gi|328449207|gb|AEB14923.1| ABC-type transporter, periplasmic subunit family 3 [Treponema succinifaciens DSM 2489] Length = 278 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 98/250 (39%), Gaps = 18/250 (7%) Query: 1 MYKD---FFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M + + I+ F++ T+A + IKK G +K + + F V Sbjct: 1 MKTKNGIILATGIAAILALFSACVKENKTSARTVEQIKKSGEIKIAVFSDKKPFGYVDEY 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+++G+DV F ++ + ++Y+P+ A R L + ++DI+ N T R Sbjct: 61 GEYQGYDVYFGNRIAKDLGVK---VKYVPVEAASRVEFLVTGKVDIVLANFTVTPERAE- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F G + + ++ L G + + GTT E F + + Sbjct: 117 -KVDFALPYMKVALGVVSPESALVTKPEDLIGKKLIISKGTTAETY----FTKNYPEVEL 171 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + F++ E +A R + D + + A + P V + + +A A+ +G Sbjct: 172 LKFDQYAEAYSALLDGRGAGMSTDNTEVLAWA--LENPGYKVGIESLGELDTIAAAVQKG 229 Query: 234 DTEWYNIVSW 243 +T ++ Sbjct: 230 NTSLLEWINN 239 >gi|146319016|ref|YP_001198728.1| glutamine ABC transporter substrate-binding protein [Streptococcus suis 05ZYH33] gi|146321225|ref|YP_001200936.1| glutamine ABC transporter substrate-binding protein [Streptococcus suis 98HAH33] gi|253752082|ref|YP_003025223.1| putative glutamine-binding protein precursor [Streptococcus suis SC84] gi|253753907|ref|YP_003027048.1| glutamine-binding protein precursor [Streptococcus suis P1/7] gi|253755218|ref|YP_003028358.1| glutamine-binding protein precursor [Streptococcus suis BM407] gi|145689822|gb|ABP90328.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor precursor [Streptococcus suis 05ZYH33] gi|145692031|gb|ABP92536.1| ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor precursor [Streptococcus suis 98HAH33] gi|251816371|emb|CAZ52002.1| putative glutamine-binding protein precursor [Streptococcus suis SC84] gi|251817682|emb|CAZ55430.1| putative glutamine-binding protein precursor [Streptococcus suis BM407] gi|251820153|emb|CAR46491.1| putative glutamine-binding protein precursor [Streptococcus suis P1/7] gi|319758449|gb|ADV70391.1| glutamine ABC transporter substrate-binding protein [Streptococcus suis JS14] Length = 279 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 56/268 (20%), Positives = 106/268 (39%), Gaps = 28/268 (10%) Query: 1 MYKD-------FFVSILCLIILFFT----------SFSTNASILGDIKKRGFLKCGINTG 43 M K + + LI+L F + TN+ + I RG L+ G+ Sbjct: 1 MDKKKINIFFAIRLLVFGLILLVFAKQPVAQTETPASITNSDQVQAIIDRGVLRVGVKQD 60 Query: 44 LVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 + F + G+++G ++D R ++ + D I++ P+ A+ R L + Q+D++ Sbjct: 61 VPNFGYKNPDTGEFEGMEIDIARKIADELGVD---IEFTPVTAQTRGPLLDNSQVDMVIA 117 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 T R+ L F Y D GF+++K GI + + L G +I V G+ T +++ Sbjct: 118 TFTITEERK--LLYNFTTPYYTDAVGFLVNKDSGIKTFTDLDGKTIGVAQGSITRTLISE 175 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 + + + E+ + RAHR DA++ D S L + + S Sbjct: 176 LADKYGITVNFAELGSYPELSVSLRAHRTDAFSVDQSILAGYISSKSELMDF-----SFS 230 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 S + + N ++ Sbjct: 231 ASDYGIVTKLSNKDLNNYLNSLVEKWTA 258 >gi|254470766|ref|ZP_05084169.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp. JE062] gi|211959908|gb|EEA95105.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp. JE062] Length = 275 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 96/245 (39%), Gaps = 8/245 (3%) Query: 1 MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K +++ ++ ++ A + DI +G L+CG+ ++ + G Sbjct: 1 MKKLIRNSFALVGAALMAASTAPAQADEIDDIIGKGTLRCGVMLDFPPAGFRNSSNEPDG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV +C+ ++ A+ + ++ + ER AL SK++D++ + TL R ++ F Sbjct: 61 FDVQYCKDMAKALGVEAEVVE---TPSPERVPALVSKRVDVMIASASNTLERAKTVA--F 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFE 177 I K I S L G S+ GTT E ++F+ + + F Sbjct: 116 TMPYVVYTNVVITQKDSDIESFEDLKGRSVGNVVGTTPEQFFLEHFEKWDDSNGNYTGFG 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E A + +A G + L + + P+ + + ++ A+ + D Sbjct: 176 SDAESYLAVSQGKVEAIIGSSAQAADLIASGNFPNLEIRAEAPFTVDLVSIAVNKDDHSL 235 Query: 238 YNIVS 242 + Sbjct: 236 LRWAN 240 >gi|55821468|ref|YP_139910.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus thermophilus LMG 18311] gi|55737453|gb|AAV61095.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus thermophilus LMG 18311] Length = 264 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 82/251 (32%), Gaps = 14/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 M K F ++ L+ + + + IK+ L ++ F V Sbjct: 1 MKKLFLGAMAFLVAVTLVACGSKKDADESIKENKKLVVAVSPDYPPFEFKTLVDGKDQVV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D+ +A+++ + ++ ++ +LQS + D+ T R+ + Sbjct: 61 GSDIKLAQAIANELGVK---LEVTTMSFDNVLSSLQSGKADLAISGISVTDERKKT--FD 115 Query: 118 FRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K + SS+ L G + VQ GT E K I Sbjct: 116 FSDPYYETQNAIIVRKGQESTYSSLDALKGKKVAVQKGTIEEGLAKKQLK----DSIVIS 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E ++ + DA + N + + + A A+ +G+ Sbjct: 172 LTAMGEAINEVKSGQVDAVDLEKPVAEGYVAQNSDLTLASVALKVDDGDAKAVAMTKGND 231 Query: 236 EWYNIVSWTHY 246 + V+ Sbjct: 232 KLKEAVNKVIK 242 >gi|312864872|ref|ZP_07725103.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus downei F0415] gi|311099999|gb|EFQ58212.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus downei F0415] Length = 282 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 90/254 (35%), Gaps = 8/254 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F V+++ ++F+T K +K G + V + +G + GFDVD Sbjct: 15 FLVALVLASCSSRSNFATETDQWQTYSKEKTIKIGFDATFVPMGFEEKDGKYTGFDVDLA 74 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 A+ K+++ ++ + L++ ID++ T R+ L F Sbjct: 75 NAVFKKYG---IKVEWQAIDWDMKETELKNGTIDLIWNGYSVTDERKKELA--FTEPYMV 129 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEE 181 + Q + K GISS++ ++G S+ QAG++ D K + + + Sbjct: 130 NQQVVVTKKSSGISSIAMMAGKSLGAQAGSSGYDAFESQPDLLKNKVKDKKAVQYSTFTQ 189 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +A R D D + ++ I+P A + D + Sbjct: 190 ALIDLQAGRIDGLLIDRVYANYYLEQEGKLDQYNIMPAGYEAESFAVGARKSDKTLVKKI 249 Query: 242 SWTHYAMVTAEELG 255 + + A + Sbjct: 250 NQAFKELYQAGQFQ 263 >gi|317153668|ref|YP_004121716.1| family 3 extracellular solute-binding protein [Desulfovibrio aespoeensis Aspo-2] gi|316943919|gb|ADU62970.1| extracellular solute-binding protein family 3 [Desulfovibrio aespoeensis Aspo-2] Length = 289 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 51/271 (18%), Positives = 90/271 (33%), Gaps = 35/271 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTN----------------------ASILGDIKKRGFLKC 38 M + + ++F + AS L I +RG L+ Sbjct: 1 MKRVLGLVAALATLVFLVACGQQPEQQAGAPAPKQDMNVRLELSKASALEKIMQRGTLRV 60 Query: 39 GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98 G+ G + F G+ GFDVD ++ A+ ++ + AL S + D Sbjct: 61 GLEAGYMPFEMTDKKGNIVGFDVDMVTEMAKAMGVK---LELVNTAWDGIIPALLSDKFD 117 Query: 99 ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLS--GASICVQAGT 154 I++ R +L + F GQ +++ I+S L+ G +I + GT Sbjct: 118 IIASGMTVNQER--NLKINFADPYIIVGQTALINAVDADKITSWKDLNAEGITITSKLGT 175 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T E + FE E + A D+ + Sbjct: 176 TGEQAVKRLMPKA----TYKSFETESEAMLEVLNGKATATVYDLPMTSIFYAERGKEGGM 231 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L + + PL AI +GD ++ N ++ Sbjct: 232 KFLSEPFTYEPLGWAINKGDPDFLNWLNNFL 262 >gi|330875049|gb|EGH09198.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 283 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 98/252 (38%), Gaps = 4/252 (1%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + L T + +S L + KRG L G + + A+G +GFD+D Sbjct: 9 KACAFVLAASFSLTNTVQAAESSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDID 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R ++ +F+DPSK++++ ++ R L + ++DI + T R + +AF Sbjct: 69 IGRIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPY 126 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y +G ++ + L A V + + K ++ V+ + Sbjct: 127 YREGVALLLPANSKYKEIDDLKAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + R D D S+ L P + S A A+ +GD +W N V+ Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVN 244 Query: 243 WTHYAMVTAEEL 254 + +T E Sbjct: 245 TALHEAMTGVEF 256 >gi|238765553|ref|ZP_04626466.1| Extracellular solute-binding protein, family 3 [Yersinia kristensenii ATCC 33638] gi|238696231|gb|EEP89035.1| Extracellular solute-binding protein, family 3 [Yersinia kristensenii ATCC 33638] Length = 284 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 60/310 (19%), Positives = 103/310 (33%), Gaps = 65/310 (20%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK 77 S + +A L DIK+ G ++ + F + G+DVD A++ + Sbjct: 24 SGAAHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLGVK--- 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ N R L SK++D+++ N T R + F + GQ FI HK + Sbjct: 81 VELRATNPANRIPLLTSKKVDLIAANFTITDDRAK--EVNFSLPYFATGQKFIAHKG-VL 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + ++G I GT E+TL D + I ++ A R A T D Sbjct: 138 KTPEDIAGLRIGADKGTVQEITLRDRYPTAK----VISYDDTPVAFTALRNGNVQAITQD 193 Query: 198 ISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L L + I P I+K I +G+ V+ T Sbjct: 194 DAKLVGLLGNLPAAQKADFEISPFSITKEYQGVGIPKGEDRLTAQVNET----------- 242 Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 + ++K + ++DR G Sbjct: 243 --------------------LVKLEKDGEAAK---------------------IYDRWFG 261 Query: 316 NQSELKIPRG 325 +++ PRG Sbjct: 262 PETKAAQPRG 271 >gi|315037806|ref|YP_004031374.1| glutamine ABC transporter [Lactobacillus amylovorus GRL 1112] gi|325956282|ref|YP_004286892.1| glutamine ABC transporter [Lactobacillus acidophilus 30SC] gi|312275939|gb|ADQ58579.1| glutamine ABC transporter [Lactobacillus amylovorus GRL 1112] gi|325332847|gb|ADZ06755.1| glutamine ABC transporter [Lactobacillus acidophilus 30SC] Length = 272 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 91/247 (36%), Gaps = 12/247 (4%) Query: 2 YKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K + ++ LI + ++ N S+ +++ + G+ F + + +G Sbjct: 4 KKFYLTFLIALITITLSACGQKKNESVYQTVRQTKTINWGVKADTPLFGSMSVKDSKIRG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F++D AL+ + +K ++ A + L++K ID + T R+ + F Sbjct: 64 FEIDLAEALTHKMLGKNAKANFVTTTANTKIQLLKNKNIDAVIAAMTITPERKK--QVNF 121 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + GQ ++ K I +V L+ + + GTT + + + F+ Sbjct: 122 SNPYFPAGQSIMVAKNSKIKNVKDLNNKRVLIVKGTTAADAVHKFAPKA----EILQFDD 177 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + AA +A + DA D L + + + P A+ +G T Sbjct: 178 YGQAFAALKADQGDALVTDNGILAG---ILHDNPGYKLTGGTFTNQPYGIAVNKGQTAMM 234 Query: 239 NIVSWTH 245 ++ Sbjct: 235 KHINTAL 241 >gi|33602282|ref|NP_889842.1| solute-binding protein [Bordetella bronchiseptica RB50] gi|33576721|emb|CAE33799.1| probable solute-binding protein [Bordetella bronchiseptica RB50] Length = 272 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 56/276 (20%), Positives = 103/276 (37%), Gaps = 14/276 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59 M K +++L + +L + +A L DIK RG L CG F+ A G+ Sbjct: 1 MMKRNVLAVLTISLLGL-AGPAHADQLDDIKARGELLCGTLGTSQPFSYQDAATRTVVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C+ ++ + + Y L+ R L ++DIL+ N E + +AF Sbjct: 60 DVDMCKLVADKLGVK---VNYKLLSVAARVPELNESRVDILAANLG--YSPERAEQIAFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y Q ++ K + ++ ++G + G+++E + + F Sbjct: 115 HTYYVSPQKLLVRKDSNLQTIESVNGRRVAATKGSSSEREIKRILDK----SQVLGFTDS 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A + + DA L L L + + I+ + P + + +T + Sbjct: 171 SASYLALQQKKVDAQFASELVLVRLMLQSPPTAPVSIIDKAVFDEPWGLGMRKSETRFIA 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 V+ AE G Q+ + T +QR Sbjct: 231 KVNEILD---QAEASGEAQRLFEKWFGAQTPYKLQR 263 >gi|148544724|ref|YP_001272094.1| extracellular solute-binding protein [Lactobacillus reuteri DSM 20016] gi|184154076|ref|YP_001842417.1| glutamine ABC transporter substrate binding component [Lactobacillus reuteri JCM 1112] gi|227363849|ref|ZP_03847954.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM2-3] gi|325683059|ref|ZP_08162575.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM4-1A] gi|148531758|gb|ABQ83757.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus reuteri DSM 20016] gi|183225420|dbj|BAG25937.1| glutamine ABC transporter substrate binding component [Lactobacillus reuteri JCM 1112] gi|227071076|gb|EEI09394.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM2-3] gi|324977409|gb|EGC14360.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM4-1A] Length = 276 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 100/255 (39%), Gaps = 19/255 (7%) Query: 1 MYKDF----FVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVK-A 52 M K + ++L + +L ++ +L + + + G+ F Sbjct: 1 MKKYWRLISLSALLFVALLTLSACGTSIAKKDVLTEDMRSQRITWGVKADTRLFGLENIR 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G +GF++D A++ I K ++P+ + R L++ ID + T RE Sbjct: 61 TGKLEGFEIDLATAITKKILGPQGKPIFVPVTSGTRVPLLKNGNIDAIMATMTITPEREK 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMK 170 + F + GQ ++ K I ++S L+ GA I +G+ + +A + Sbjct: 121 --QVDFTHSYFDAGQSLLVKKGSPIKNISDLNRRGAVILGVSGSNSVKNVAKFAPKA--- 175 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + A ++ + DA T D LY + + P + ++ +K P A+ Sbjct: 176 -RVLQLSDYAQAMTALKSKQGDALTTDNGILYGMAA--ENPG-YEVVGGNFTKEPYGIAV 231 Query: 231 IQGDTEWYNIVSWTH 245 + T + N ++W Sbjct: 232 NKNQTRFRNKLNWAL 246 >gi|190894703|ref|YP_001984996.1| putative amino acid ABC transporter substrate-binding protein [Rhizobium etli CIAT 652] gi|190700364|gb|ACE94446.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] Length = 279 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 97/250 (38%), Gaps = 4/250 (1%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V L + L T + S L ++ RG L G + + A+ +GFDVD Sbjct: 9 VMSLAVAALMSTPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQGFDVDMGHI 68 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ A+F DP KI+Y+ ++ R + + ++DI + T R + +AF Y +G Sbjct: 69 IAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAFTIPYYREG 126 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 G ++ + + L A + A + +E V+ I A Sbjct: 127 VGLMLKADGKYADYAALKAAGSSATISVLQNVYAETMVHAALPEATVDQYESVDLIYQAL 186 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + R DA D S+L P + + A A+ +GD +W N V+ + Sbjct: 187 ESGRADAVATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWLNFVNTALH 244 Query: 247 AMVTAEELGI 256 +T E Sbjct: 245 EAMTGVEFDF 254 >gi|59712194|ref|YP_204970.1| lysine/arginine/ornithine transporter subunit [Vibrio fischeri ES114] gi|59480295|gb|AAW86082.1| lysine/arginine/ornithine transporter subunit [Vibrio fischeri ES114] Length = 258 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 88/251 (35%), Gaps = 23/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L + + K+ ++ GI F+ + +G+ KGFD Sbjct: 1 MKKWLLAAVVASTALTGAAQA---------KEWKQIRFGIEGAYPPFSWTEPSGELKGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + ++ + + + +L +++ D + T R+ + F Sbjct: 52 VDIANALCKEM---EARCKIVAQDWDGIIPSLLARKYDAIIAAMSITEERKK--KIDFTE 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F+ K + + L G ++ VQ TT + L D F + Sbjct: 107 KYALIPNKFVAKKGTKLVMTKEGLKGVTVGVQRATTHDKYLTDNF---GKGVDLKRYGSF 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E +A R D GD SAL L +E+ + ++ A + D Sbjct: 164 DEAYLDLKAGRIDTVLGDASALEEGLLNKPGGTEYEFVGPSLTDPKWFGEGFGIATRKQD 223 Query: 235 TEWYNIVSWTH 245 + ++ Sbjct: 224 KDLTEQLNAAI 234 >gi|283833316|ref|ZP_06353057.1| extracellular solute-binding protein [Citrobacter youngae ATCC 29220] gi|291070954|gb|EFE09063.1| extracellular solute-binding protein [Citrobacter youngae ATCC 29220] Length = 277 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 53/231 (22%), Positives = 90/231 (38%), Gaps = 11/231 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDD 74 ++ A L DIK G +K F + A G+DVDF AL+ ++ Sbjct: 23 GISASQAQADQLADIKAAGVVKVATFDANPPFGSIDAKTHKIVGYDVDFAEALAKSLGVK 82 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ + N R LQS + D++ + T R + + F + GQ F++ K Sbjct: 83 ---LELVATNPANRIPLLQSGKADLIVADITITPER--AQVIDFSVPYFVTGQQFLVPAK 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + + S A I GTT E L F + + ++ + A R A Sbjct: 138 SP-DKLDEYSKARIGAVKGTTGEQALHQRFP----QSRVLAYDDIPLALTALRNGNVQAI 192 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 T D + L L ++ ILPD++SK + + +G+ V+ Sbjct: 193 TQDSTILAGLLGGAPDKADFKILPDLLSKEEIGVGVKKGEPALLKAVNDEL 243 >gi|301629487|ref|XP_002943871.1| PREDICTED: ABC transporter arginine-binding protein 1-like [Xenopus (Silurana) tropicalis] Length = 310 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 94/317 (29%), Gaps = 23/317 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-------FLKCGINTGLVGFAEVKAN 53 M K ++L L + ++ + G++ Sbjct: 1 MKKFAIAALLTLGAVLAGCSREESAAPAATPVPAPAPVAVTRIVMGLDDNFPPMGFRDEK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFD+D + ++ ++++ P++ + L K++D+L T R Sbjct: 61 NELVGFDIDMAKEVARR---QGLEVEFKPIDWSAKEAELSGKRVDVLWNGLTITEER--R 115 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + Q ++ I + + L+G + VQ G++ + + Sbjct: 116 QNILFTAPYMENHQIIVVPAGSAIKAKADLAGKVVGVQEGSSAVDAIKKEEAVYQSFKEL 175 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 F R DA D + + ++ +L D + + Sbjct: 176 KAFGDNVAALMDLTTGRLDAVVVDE--VVGRYYVAKKADQYAVLEDNFGTEAYGVGLRKD 233 Query: 234 DTEWYNIVSWTH-------YAMVTAEELGITQKNINQVSKDTTNPDVQRF-LGIDKSSNI 285 DT + + A AE++ K T R + Sbjct: 234 DTALHGRIDKALADMKADGSAAKIAEQITSAPKRTVWACARTIPALHGRIDKALADMKAD 293 Query: 286 GEALGLTKDWT-YRIIR 301 G A + + W II+ Sbjct: 294 GSAAKIAEQWFGKNIIK 310 >gi|256026691|ref|ZP_05440525.1| solute-binding protein for glutamate_aspartate ABC transporter system [Fusobacterium sp. D11] gi|260495454|ref|ZP_05815580.1| ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium sp. 3_1_33] gi|289764686|ref|ZP_06524064.1| ABC-type amino acid transport/signal transduction system [Fusobacterium sp. D11] gi|260196991|gb|EEW94512.1| ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium sp. 3_1_33] gi|289716241|gb|EFD80253.1| ABC-type amino acid transport/signal transduction system [Fusobacterium sp. D11] Length = 293 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 99/260 (38%), Gaps = 29/260 (11%) Query: 2 YKDFFVSILCLIILFFTSF------------------STNASILGDIKKRGFLKCGINTG 43 K ++I+ + +L + + A + +IK G +K G+ T Sbjct: 5 KKVLKLAIVGVAVLALAACENKTEEAKPESQAPAQETTAKARTVQEIKDSGVIKIGVFTD 64 Query: 44 LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F V NG +G+DV F L+ + ++Y+ L+ R ++ + DI++ N Sbjct: 65 KAPFGYVDENGKNQGYDVYFTNRLAKDLGVK---VEYISLDPASRVEYAETGKADIVAAN 121 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R + F G + K I S+ +L ++ V GTT E Sbjct: 122 FTVTPERAE--KVDFSLPYMKVSLGVVSPDKAVIKSIDELKDKTLIVSKGTTAEYY---- 175 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 F + + ++ + A R DA++ D + + A P V + + Sbjct: 176 FSKNYPEVKLQKYDSYADAYNALLDGRGDAFSTDNTEVLAWA--KANPGFTVGIDSLGDV 233 Query: 224 SPLAPAIIQGDTEWYNIVSW 243 +A A+ +G+ + + ++ Sbjct: 234 DTIAVAVQKGNKDLLDWINN 253 >gi|268319110|ref|YP_003292766.1| amino acid ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] gi|262397485|emb|CAX66499.1| amino acid ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] gi|329666941|gb|AEB92889.1| glutamine ABC transporter solute-binding component [Lactobacillus johnsonii DPC 6026] Length = 274 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 88/225 (39%), Gaps = 10/225 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++++ +K+ + G+ F + G +GF+VD +AL+ + +K +++ Sbjct: 29 SSNVYDQVKESKTITWGVKADTRLFGLMSIKTGKIEGFEVDLAKALTKQMLGKDAKAEFV 88 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 K R L++ ID + T R+ + F + GQ ++ I +V Sbjct: 89 QTTPKTRIPLLKNGNIDAILATMTITPDRKK--QVTFSEPYFTAGQSLLVKDDSSIKNVR 146 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + GTT + + + ++ + A +A + A T D L Sbjct: 147 DLNGKTALAVKGTTAVDNVKKFAPKAK----VLEYDDYGQAFTALKAGQGQAMTTDNGLL 202 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + N + ++ + P A+ +G T++ + ++ Sbjct: 203 AGIASENKG---YKLVGGTYTSEPYGIAVEKGQTDFADHINKALN 244 >gi|317153612|ref|YP_004121660.1| family 3 extracellular solute-binding protein [Desulfovibrio aespoeensis Aspo-2] gi|316943863|gb|ADU62914.1| extracellular solute-binding protein family 3 [Desulfovibrio aespoeensis Aspo-2] Length = 274 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 102/249 (40%), Gaps = 11/249 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + +S+L +++ + + + +K G++ + + +W GFDVD Sbjct: 2 RVLKISVLAALLVMAATVAFAGPTYDRVMSTKVVKAGMSNQGIPGGFINDKNEWVGFDVD 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSK--QIDILSRNTDWTLLREISLGLAFRP 120 ++ + K+ +N R +Q+ ++D++ N T RE + F Sbjct: 62 MATEIAKRLGCTLEKVV---VNNNTRVSFVQTDPPKVDMVLANM--THKRERDQKIDFSI 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179 +FDGQ F+ K + V L+G + GTT+ + +Y K I ++ Sbjct: 117 TYFFDGQKFLAKKG-AVKDVKDLAGMKVGSMQGTTSIVNATEYLKKLGNPDPKVIGYDGE 175 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A R+ R A + D + L P + ++ D IS P + Q D+ W + Sbjct: 176 IAMFEALRSGRVQAISTDSTILLGYAAKV--PGQFELVGDFISDEPYGIGLPQDDSAWRD 233 Query: 240 IVSWTHYAM 248 I+++T M Sbjct: 234 IINFTIQDM 242 >gi|257461485|ref|ZP_05626581.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257441208|gb|EEV16355.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 268 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 101/249 (40%), Gaps = 18/249 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K FF+ +L I +F A+ L +IK+ ++ G+ F++ G ++GF+ Sbjct: 1 MKKSFFLILLSAIFVF-------ANSLSEIKQSKVIRVGVYENEPPFSKSSEKG-FEGFE 52 Query: 61 VDFCRALSSAIFDD-PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 V+ AL+ IF + +I+ +P+ + RF LQ+ Q D++ T R+ + F Sbjct: 53 VELANALAGKIFGNSGGRIELIPVTNEVRFPMLQNNQADMIIAAASITEERKG--SVDFS 110 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K I + L G I + TT E + + Y+ Sbjct: 111 MPYFTVNLGILTKKDSNIHKIGDLMGKKIGIIRKTTGEAYI-----KKDGGYNVSYCNDS 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + ++ D Y + + + P+ V + ++ L A+ +G+ E Sbjct: 166 VDCYRRLKSGEIDGYCNNNLFVMVYPIV--DPAVEVNIKNLGDNVFLGVAVQKGNAELLE 223 Query: 240 IVSWTHYAM 248 ++ A+ Sbjct: 224 AINKGLIAL 232 >gi|227529681|ref|ZP_03959730.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus vaginalis ATCC 49540] gi|227350471|gb|EEJ40762.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus vaginalis ATCC 49540] Length = 280 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 93/268 (34%), Gaps = 18/268 (6%) Query: 1 MYK-DFFVSILCLI--ILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M K +++ +L LI I+F + + I++R + G++ V + Sbjct: 1 MRKIKYWLVLLALITPIIFLSGCESVTQRANTQDTWNRIERRKRVVIGLDDSFVPMGFRQ 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 NG G+DVD RA+ + P++ + L++ ID+L R Sbjct: 61 KNGKLVGYDVDLARAVFKQYGIKAD---FQPIDWSMKETELKNGTIDLLWNGYSINSSRR 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-- 169 +AF + Q + K I + + + G S+ VQ G+T L + KA Sbjct: 118 K--KVAFSRPYLKNEQILVTKKASNILNFAGMKGKSLGVQNGSTGLTALDERPKALKDLI 175 Query: 170 -KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV-ILPDIISKSPLA 227 P++++ + A+R D S + + A Sbjct: 176 KNQKPVLYDTFPDAFIDLNANRIQGILMDQVYADYYIKHQKNSSSYRTYSSKELPVEYYA 235 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + +GD ++ + EL Sbjct: 236 VGMRKGDKTLRQKINAGLGKLQKNGELR 263 >gi|254382236|ref|ZP_04997597.1| glutamate binding periplasmic protein [Streptomyces sp. Mg1] gi|194341142|gb|EDX22108.1| glutamate binding periplasmic protein [Streptomyces sp. Mg1] Length = 301 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 86/236 (36%), Gaps = 10/236 (4%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73 + + K+RG L G+ E +G + GFD++ + +S+++ Sbjct: 41 VATGFSLPGSPTWERAKRRGHLVVGVKEDQPYMGEKDPASGRYSGFDIEIAKMMSASLGF 100 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DP I++ + + R ALQ+ QID R+ +G F + GQ ++ K Sbjct: 101 DPKTIEFKTIASANRETALQNGQIDYYVGTYTINDNRKKQVG--FAGPYFMAGQSLLVRK 158 Query: 134 KK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 + I L+G +C AG+T L + + ++ ++ D Sbjct: 159 DEKDIKGPEDLAGKKVCSAAGSTPYQRLQKEYPEA----VLVAYDTYSACVDNLLTYQVD 214 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 A + D S L P E ++ S+ P + + D + A Sbjct: 215 AVSTDDSILLGYAAKV--PDELKVVGKPFSEEPYGIGVPRSDNALRLALDDALEAN 268 >gi|228477062|ref|ZP_04061700.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] gi|228251081|gb|EEK10252.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] Length = 264 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 78/251 (31%), Gaps = 14/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 M K F ++ L + + + IK+ L ++ F V Sbjct: 1 MKKLFLGAMALLAAVTLVACGSKKDAYESIKENKKLVVAVSPDYAPFEFKTLVDGKDQVV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D+ +A++ + ++ ++ +LQ+ + DI T R+ + Sbjct: 61 GSDIKLAQAIADELGVK---LEVTTMSFDNVLSSLQAGKADIAISGISVTDERKKT--FD 115 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K SS+ G + VQ GT E K + Sbjct: 116 FSDPYYETQNAIIVRKDQESTYSSLDAFKGKKVAVQKGTIEEGLAKKQLK----DSTVVS 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E ++ + DA + N + + + A A+ +G+ Sbjct: 172 LTAMGEAINEVKSGQVDAVDLEKPVAEGYVAQNPDLALASVALKVDDGDAKAVAMAKGND 231 Query: 236 EWYNIVSWTHY 246 + V+ Sbjct: 232 KLKEAVNKVIK 242 >gi|308067557|ref|YP_003869162.1| Cystine-binding periplasmic protein precursor [Paenibacillus polymyxa E681] gi|305856836|gb|ADM68624.1| Cystine-binding periplasmic protein precursor [Paenibacillus polymyxa E681] Length = 285 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 83/270 (30%), Gaps = 28/270 (10%) Query: 2 YKDFFVS---ILCLIILFFTSFS-----------------TNASILGDIKKRGFLKCGIN 41 K F V+ L L L ++ + L IKK G +K G+ Sbjct: 5 KKGFLVTTLMALALFSLVLSACGTKPEASNTSNGAGSSNVAAGNQLEAIKKAGVIKVGMM 64 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 + + N + GFDVD + L+ I P + +LQ K+ D + Sbjct: 65 GTYPPYNFLNDNKELDGFDVDIAKELAKRIGVKPE---FTAQEFSGLIPSLQKKKFDAVI 121 Query: 102 RNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 T R+ + F + + K I+ + G +I V GT E L Sbjct: 122 SQVTITEDRKK--AIDFTEPYITNNVNIIVNSKTNDITKLEDFKGKTIGVGLGTNDESYL 179 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 + + ++ V + R DA + + + + + + Sbjct: 180 RNEVLPKVGDFEIKTYDDVITSLKDLNSGRIDATINN--LYALKPIIDKNGFQIKAVGEP 237 Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 I AI Q E ++ M Sbjct: 238 IKSDQAGVAINQKTPELKEALNKALKEMKE 267 >gi|58337930|ref|YP_194515.1| amino acid ABC transporter [Lactobacillus acidophilus NCFM] gi|227902903|ref|ZP_04020708.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus acidophilus ATCC 4796] gi|58255247|gb|AAV43484.1| amino acid ABC transporter [Lactobacillus acidophilus NCFM] gi|227869319|gb|EEJ76740.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus acidophilus ATCC 4796] Length = 272 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 89/252 (35%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K + +L ++L T + + I ++ + G++ V K NG Sbjct: 1 MKKKWIFVLLATLMLVLTGCESVQKRANTQNTWNKIAQKKQVVIGLDDSFVPMGFEKKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G+DVD + + + + + ++ L++ ID+L T RE Sbjct: 61 QLTGYDVDLAKEVFKLYGIN---VSFQTIDWSMNVTELRNGTIDLLWNGYSITKQREK-- 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 +AF + Q ++ K GISS SQ+ + +Q G+T E + K + Sbjct: 116 KVAFSRPYLRNRQVLVVKKNSGISSFSQMKKYELGMQTGSTAEQWYETKQNILHAKKT-V 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQG 233 +++ + A R D + + ++ D + A + +G Sbjct: 175 LYDTISNSFLDLNAGRIQGILLDEVYANYYIAHMAKSKNYKVIQNDAVPMDLFAVGMRKG 234 Query: 234 DTEWYNIVSWTH 245 D V+ Sbjct: 235 DKTLRKKVNQGL 246 >gi|225870392|ref|YP_002746339.1| amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus equi subsp. equi 4047] gi|225699796|emb|CAW93609.1| putative amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus equi subsp. equi 4047] Length = 278 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 80/255 (31%), Gaps = 13/255 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K V++ + + + K++ + G + V +G Sbjct: 4 KKTLLVALFAATATLLVACGASNKQTSSDAWDSYKQKKTITLGFDNTFVPMGYKDESGKN 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD++ +A+ + ++Y +N + L + +ID++ T R+ + Sbjct: 64 TGFDIELAKAVFDQYGIN---VKYQAINWDLKETELNNGKIDLIWNGYSVTKERQA--KV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHP 173 AF + Q + K ISS + + ++ Q+G++ + K Sbjct: 119 AFTEPYMKNEQVLVTQKSSQISSFADMKNKTLGAQSGSSGYDAFTSHPKVLKDLVKGNDA 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +E + + R D D + I+ A + + Sbjct: 179 TQYETFTQAFIDLKNKRIDGLLIDRVYANYYLQQEGELDRYNIIASEFEGEDFAVGVRKA 238 Query: 234 DTEWYNIVSWTHYAM 248 D ++ ++ Sbjct: 239 DKTLQKKITQALKSL 253 >gi|195978015|ref|YP_002123259.1| amino acid ABC transporter extracellular-binding protein precursor [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974720|gb|ACG62246.1| amino acid ABC transporter extracellular-binding protein precursor [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 278 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 35/255 (13%), Positives = 80/255 (31%), Gaps = 13/255 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K V++ + + + K++ + G + V +G Sbjct: 4 KKTLLVALFAATATLLVACGASNKQTSSDAWDSYKQKKTITLGFDNTFVPMGYKDESGKN 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD++ +A+ K++Y +N + L + +ID++ T R+ + Sbjct: 64 TGFDIELAKAVFDQYG---IKVKYQAINWDLKETELNNGKIDLIWNGYSVTKERQA--KV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHP 173 AF + Q + K ISS + + ++ Q+G++ + K Sbjct: 119 AFTEPYMKNEQVLVTQKSSQISSFADMKNKTLGAQSGSSGYDAFTSHPKVLKDLVKGNDA 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +E + + R D D + I+ A + + Sbjct: 179 TQYETFTQAFIDLKNKRIDGLLIDRVYANYYLQQEGELDRYNIIASEFEGEDFAVGVRKA 238 Query: 234 DTEWYNIVSWTHYAM 248 D ++ ++ Sbjct: 239 DKTLQKKITQALKSL 253 >gi|261822707|ref|YP_003260813.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] gi|261606720|gb|ACX89206.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] Length = 268 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 94/254 (37%), Gaps = 10/254 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K ++++ +L + S A L DI+KRG L+ + F V + +G+D+ Sbjct: 8 IKKGLLAVMGAAMLLVQAGSAMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 67 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D R L+ + +Q +P+ + R LQ+ ++D++ + RE + F Sbjct: 68 DIARYLAKEM---KLTLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREKV--IDFSRA 122 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G K ++S L G SI V G ++ L + +E Sbjct: 123 YAPFFLGVFGPKDSALASSEALEGKSIGVTRGAVEDMVLTETAPKA---AQIKRYEDNNT 179 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +AY + + + + A+ P++ + ++ SP + + + V Sbjct: 180 TLSAYLSGQVEFVATGNLVVAAIAEQ--NPTKAPVAKFMLKDSPCYIGLKKDEPALKAKV 237 Query: 242 SWTHYAMVTAEELG 255 + E L Sbjct: 238 DALIEQALKDETLN 251 >gi|330816747|ref|YP_004360452.1| Extracellular solute-binding protein, family 3 [Burkholderia gladioli BSR3] gi|327369140|gb|AEA60496.1| Extracellular solute-binding protein, family 3 [Burkholderia gladioli BSR3] Length = 264 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 83/252 (32%), Gaps = 19/252 (7%) Query: 1 MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K + L + F + S A +L + K+RG L+ G+ F +G+ Sbjct: 1 MKIVSLKKLLTAAL-IGASFVAATSHAADLLDEAKQRGTLRIGLEGTFPPFNSKAPSGEL 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G+DVD +A+++ + P ++ LQ+ + D++ T R+ L Sbjct: 60 VGYDVDIAKAVAAKLGLKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGVTDKRKEV--L 114 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F P + I K S+ L G + V GT Sbjct: 115 DFSPAYTYSAAQLIQRKDDTRNFKSLDDLKGKKLGVGLGTNYMD-----MAKSVPGIDVK 169 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E A R DA D L L + P + + P A +G+ Sbjct: 170 TYPGAPEYLRDLAAGRLDAALNDRLMLAYLLKNSQLP--LRTGATLEAGQPSAIPFKKGN 227 Query: 235 TEWYNIVSWTHY 246 ++ + Sbjct: 228 PKFAKAIDDAMT 239 >gi|291544976|emb|CBL18085.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Ruminococcus sp. 18P13] Length = 277 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 82/250 (32%), Gaps = 10/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +IL +L T + ++ G + F V NG++ GFD Sbjct: 1 MKLKSIFAILTAGVLACTGLTACGDDKAASNQKATFTVGFDQDFPPFGYVDENGEFTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ + + + +I+ P++ + L L S I + + Sbjct: 61 LELAKEAAKRM---DMEIKLQPIDWDSKELELSSGSISCIWNGFTMNG---RENDYTWTE 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA--DYFKAHNMKYHPIVFER 178 + Q F++ GI + + L+G + Q + L D+ + + Sbjct: 115 SYMDNSQVFVVKSDSGIKTQADLAGKIVTAQTDSAALNALNGDDFKDLKASFKELLTCAQ 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 A DA D A + S+ +IL + I K A +G+TE Sbjct: 175 YNTAFMDLEAGAVDAVAMD--IGVAKYQIEGKESKFIILDEPIVKEQYAVGFYKGNTEMR 232 Query: 239 NIVSWTHYAM 248 + V M Sbjct: 233 DKVQKALDEM 242 >gi|227890100|ref|ZP_04007905.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] gi|227849544|gb|EEJ59630.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] Length = 284 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 70/296 (23%), Positives = 119/296 (40%), Gaps = 38/296 (12%) Query: 1 MYKDFFV-------SILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGL 44 M K F+ IL + + T+ S N+S + IKKRG LK + L Sbjct: 1 MKKHKFIKKLIAAVGILAVGAVILTACSNNSSSNSSSNNPSSVAAIKKRGTLKVAVFGDL 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 + V +G G+DV R L+ + ++++ +NA R L + + DI+ N Sbjct: 61 PPYGWVNKDGKRVGYDVRLARELAKEMGVK---VKFVQVNANNRVDTLNANKADIVLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + K K I++V+QL G + V GTT E +YF Sbjct: 118 TVTSERK--QVVDFAKPYMKVSVGVVSPKSKPITNVNQLKGKKVIVTKGTTAE----NYF 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + + F+ + A + R A D S LYA + P V + + S Sbjct: 172 TSKQPDVDLLKFDSKTQQFNAMKNGRAAALADDNSYLYAW--VKNNPKYTVGIKHLGPNS 229 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280 +APA+ +G+ + + I + N + + N +++ + G D Sbjct: 230 YIAPAVKKGNKSLLDWTNK-----------HINKLNKDGFFVNDYNQELKPYFGND 274 >gi|150376683|ref|YP_001313279.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150031230|gb|ABR63346.1| extracellular solute-binding protein family 3 [Sinorhizobium medicae WSM419] Length = 280 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 97/259 (37%), Gaps = 7/259 (2%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M F + ++ + + AS L ++ RG L G + + A + Sbjct: 1 MISKFTAVAGFVAAVLAGMPAHAQQASSKLDEVLSRGHLILGTGSTNAPWHFKSAEDKLQ 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD R ++ A+F DP KI+++ ++ R + + ++DI + T R + +A Sbjct: 61 GFDVDMGRIIAKALFGDPEKIEFVNQSSDARIPNITTGKVDITCQFMTVTGER--AQQVA 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y +G G ++ L A V + D A + +E Sbjct: 119 FTIPYYREGVGLMLKADGKYGDYEALKAAGSSVTISVLQNVYAEDMVHAALPEAAVDQYE 178 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 V+ I A + R DA D S+L + + A + +GD +W Sbjct: 179 SVDLIYQALESGRADAAATDQSSLAWYMTQ--NSGRYKDAGYGWNPQTYACGVRRGDQDW 236 Query: 238 YNIVSWTHYAMVTAEELGI 256 N V+ + +T E Sbjct: 237 LNFVNTALHEAMTGVEFDF 255 >gi|306829415|ref|ZP_07462605.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus mitis ATCC 6249] gi|304428501|gb|EFM31591.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus mitis ATCC 6249] Length = 263 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 92/257 (35%), Gaps = 14/257 (5%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + +L L F T+ + AS +K+G + G + V + NG Sbjct: 1 MKRKKIALVLALFFSFFLTACTQKASDPKQDNWAKYQKQGSITIGFDNTFVPMGFEEKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D +A+S + +I++ P++ + LQ+ ID + T R+ Sbjct: 61 QYAGFDIDLAQAVSEKLG---IQIKFQPIDWDMKETELQNGTIDAIWNGYSATDERKE-- 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKY 171 ++F + Q + K + I S+ ++ ++ QAG++ L + K Sbjct: 116 KVSFTIPYMENQQVLVSKKSQNIHSIQDMTDKTLGAQAGSSGYLNFERQPEPLKNRVKDQ 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ E + R DA D + + + + + + Sbjct: 176 KANQYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILNNYNVFSAGFESESFSVGVR 235 Query: 232 QGDTEWYNIVSWTHYAM 248 D ++ A+ Sbjct: 236 PADKTLLVALNKAFVAL 252 >gi|168485722|ref|ZP_02710230.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC1087-00] gi|221231432|ref|YP_002510584.1| putative glutamine-binding protein precursor [Streptococcus pneumoniae ATCC 700669] gi|298229830|ref|ZP_06963511.1| putative glutamine-binding protein precursor [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255470|ref|ZP_06979056.1| putative glutamine-binding protein precursor [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502401|ref|YP_003724341.1| amino acid ABC superfamily transporter ATP-binding protein [Streptococcus pneumoniae TCH8431/19A] gi|183571134|gb|EDT91662.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC1087-00] gi|220673892|emb|CAR68398.1| putative glutamine-binding protein precursor [Streptococcus pneumoniae ATCC 700669] gi|298237996|gb|ADI69127.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pneumoniae TCH8431/19A] Length = 254 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 51/241 (21%), Positives = 95/241 (39%), Gaps = 11/241 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ F Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+ +I V G+ T+ + + K + + + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNSKTIGVAQGSITQCLITELGKKKGLTFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + +TE + + Sbjct: 176 AHRIDAFSVDRSILSGYTSKRT-----ELLDDSFKPSDYGIVTKKSNTELNDYLDNLVTK 230 Query: 248 M 248 Sbjct: 231 W 231 >gi|332160644|ref|YP_004297221.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664874|gb|ADZ41518.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 263 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 94/245 (38%), Gaps = 11/245 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L +++ + + A L I++RG L+ + F V + +G+D Sbjct: 3 MKKRML-ALLGAVLILVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ + K+Q +P+ + R LQ+ ++D++ + RE +AF Sbjct: 62 IDMAHYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREK--AIAFSR 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G K+ + QL+G ++ V G ++ L++ +E Sbjct: 117 AYAPFFLGVFGAKEDALKQPEQLAGKTVGVTRGAVEDMVLSELAPK---DAQIKRYEDNN 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +AY + + D L L P++ + ++ SP + QG+ Sbjct: 174 TTLSAYLSGQVDYLATGN--LVVSALARQNPAQAPVAKFMLKDSPCYIGLRQGEPALKAK 231 Query: 241 VSWTH 245 V Sbjct: 232 VDALI 236 >gi|229829988|ref|ZP_04456057.1| hypothetical protein GCWU000342_02094 [Shuttleworthia satelles DSM 14600] gi|229791286|gb|EEP27400.1| hypothetical protein GCWU000342_02094 [Shuttleworthia satelles DSM 14600] Length = 294 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 94/271 (34%), Gaps = 29/271 (10%) Query: 1 MYKDFFVSILCLIILFFTSFS----------------TNASILGD--IKKRGF-LKCGIN 41 M K ++ ++ L T+ + +K L G + Sbjct: 4 MKKIMAFGLIAVMALAVTACGTKSGDQKNANSGDGSKAESKTAKKGDVKNTDQNLIVGFD 63 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F + +NG++ GFD++ + ++ + + + P++ + + + L + ID + Sbjct: 64 QNFPPFGYLDSNGNFTGFDLELAQEAANRMKVE---LVLQPIDWETKDMELSAGTIDCIW 120 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 F + Q F++ K GI L+G + VQ ++ E L Sbjct: 121 NGFSVNG---REKNYTFSDSYMNNAQVFVVRKNSGIEDEQGLAGKVVDVQKESSAETALN 177 Query: 162 DYFKA--HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 + N + DA D AL ++P + IL + Sbjct: 178 SKEEETLKNSFAQLNQVADYNTAMMDLESGAVDAVAMDK--FVALDQMKNKPDKFQILNE 235 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 IS A A ++G+T+ + V+ + M T Sbjct: 236 QISSEQYAVAFLKGNTQLRDQVNSVLHEMDT 266 >gi|225350813|ref|ZP_03741836.1| hypothetical protein BIFPSEUDO_02383 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158269|gb|EEG71511.1| hypothetical protein BIFPSEUDO_02383 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 302 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 11/218 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +IKK G LK + + F V +G++ G+DV F L + D ++Y ++A Sbjct: 56 TLDEIKKSGKLKVAVFSDKAPFGYVDKDGNYAGYDVYFAERLGKDLGVD---VEYTSVDA 112 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 R L S ++DI N T R+ + F G + + I+ V QL G Sbjct: 113 AARVDVLTSNKVDITLANFTVTDERKE--KVDFAKPYMKVALGVVSPENAEITDVDQLKG 170 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ V GTT E +F+ + +++ + A R DA++ D + + A Sbjct: 171 KTLIVTKGTTAET----FFEKNYPDIKLQKYDQYADAYNALLDGRGDAFSTDNTEVLAWA 226 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 V + ++ K +A A+ +G+ E + ++ Sbjct: 227 --KSNKGFKVGITELGDKDTIAAAVQKGNKELLDWIND 262 >gi|240168877|ref|ZP_04747536.1| putative glutamine-binding lipoprotein [Mycobacterium kansasii ATCC 12478] Length = 328 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 10/226 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + + + +I +RG L G++ G F+ GD GFDVD ++ IF PS ++ Sbjct: 79 AEADAAVANIHERGRLIVGLDIGSNLFSFRDPITGDITGFDVDIAGEVARDIFGSPSHVE 138 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y L+A ER ALQ+ Q+D++ + T R + F + Q + + IS Sbjct: 139 YRILSAAERITALQTSQVDVVVKTMTITCERRKL--VNFSTVYLDANQRILAPRDSSISK 196 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 VS LSG +CV GTT+ + + + + A + + DA + D S Sbjct: 197 VSDLSGKRVCVARGTTSLRRIREIAP----PPVIVSVVNWADCLVAMQQRQIDAVSTDDS 252 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L L + P H++ PD ++ P I +T V+ T Sbjct: 253 ILAGL--VEEDPYLHIVGPD-MANQPYGIGINLDNTGLVRFVNGTL 295 >gi|297191653|ref|ZP_06909051.1| glutamate binding protein [Streptomyces pristinaespiralis ATCC 25486] gi|197721587|gb|EDY65495.1| glutamate binding protein [Streptomyces pristinaespiralis ATCC 25486] Length = 278 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 81/256 (31%), Gaps = 14/256 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANG 54 M + ++ S + S K+ G + GI G +G Sbjct: 1 MKLRKVTAASATVLALALSATACGS--DSGKESGSGDGGDKITIGIKYDQPGLGLKTPDG 58 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFDVD ++ + I++ + +R AL +D ++ T R+ Sbjct: 59 -FTGFDVDVATYVAKELGYAEDDIEFKETKSADRETALARGDVDFIAATYSITDERK--Q 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F Q ++ +S L+G +C G+T+ + F Sbjct: 116 KVDFAGPYLLAHQDLLIRADDNVSKGDDLNGKKLCSVTGSTSAQNVKAKFA---PDAQLQ 172 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E ++ DA T D S L + + +S + +GD Sbjct: 173 QVGTYSECLNGLQSGAVDALTTDDSILAGYASQEQYKGKFKLAGLKLSNENYGIGVKKGD 232 Query: 235 TEWYNIVSWTHYAMVT 250 E + ++ MV Sbjct: 233 KEMVDKINAALEKMVQ 248 >gi|229817173|ref|ZP_04447455.1| hypothetical protein BIFANG_02432 [Bifidobacterium angulatum DSM 20098] gi|229784962|gb|EEP21076.1| hypothetical protein BIFANG_02432 [Bifidobacterium angulatum DSM 20098] Length = 298 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 11/228 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 S S A L +IKK G LK + + F V +G G+D+ F L+ + Sbjct: 43 TTASSSAKARTLDEIKKSGELKVAVFSDKAPFGYVDKDGKNAGYDIVFAERLAKDLGVK- 101 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 ++Y ++ R L S ++DI N T R+ + F G + + Sbjct: 102 --VKYTSVDPAARVDVLTSNKVDITLANFTVTDERKE--KVDFAKPYMKVALGVVSPENA 157 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ VSQL G ++ + GTT E F+ + +++ + A R DA++ Sbjct: 158 EITDVSQLKGKTLIIAKGTTAETY----FEKNQPDVKLQKYDQYADAYNALLDGRGDAFS 213 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 D + + A V + + + +APA+ +G+ E N ++ Sbjct: 214 TDNTEVLAWA--KSNKGFKVGITKLGDEDTIAPAVQKGNKELLNWLND 259 >gi|212640131|ref|YP_002316651.1| amino acid ABC transporter periplasmic protein [Anoxybacillus flavithermus WK1] gi|212561611|gb|ACJ34666.1| ABC-type amino acid transport system, periplasmic component [Anoxybacillus flavithermus WK1] Length = 265 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 82/255 (32%), Gaps = 18/255 (7%) Query: 1 MYKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + L + T + IK++G LK G F G+ Sbjct: 6 MKKWLLLIALFMFGALLTGCGQKEKENDLFAQIKEKGELKIGTEGTYPPFTFHDETGELT 65 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDV+ R ++ + P ++ F L +K+ D+++ + Sbjct: 66 GFDVEIAREVAKRLGVKP---VFIETKWDAMFAGLDAKRFDMIANQVGI--RPDRQEKYD 120 Query: 118 FRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F ++HK+ I S + G Q+ T+ LA + A + Sbjct: 121 FSNPYITSAAVLVVHKENKEIKSFEDIKGKK-AAQSMTSNYAELARSYGA-----EVVGV 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDI-SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E + + R DA D S L LK D P + I+ S +G Sbjct: 175 EGFNQAIELLSSKRVDATMNDKLSVLDFLKQKPDAPIQ--IVATHDDASQSGLMFRKGSD 232 Query: 236 EWYNIVSWTHYAMVT 250 V+ M+ Sbjct: 233 TLVEAVNKALKEMME 247 >gi|4204972|gb|AAD10862.1| orf J; putative ATP-binding cassette transport system; similar to substrate binding protein and to components of ABC transport systems [Leuconostoc lactis] Length = 279 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 101/254 (39%), Gaps = 22/254 (8%) Query: 1 MYKDFFVSILCLIILFFT-----------SFSTNASILGDIKKRGFLKCGINTGLVGFAE 49 M K + + ++ + + + IKK G +K + L + Sbjct: 1 MNKKIKKFAIVITLVVGIIGFSFEHKVADAATNQGRTIKQIKKSGKIKIAVFGDLKPYGW 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V NG +G+D++ + ++ + ++Y+ +NA R AL S ++D+ N T Sbjct: 61 VDKNGKRQGYDIELAKKIAKDLGVK---VKYVQVNANARVDALNSGKVDLALANFTVTPE 117 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ ++F G K I+ V+QL G ++ V GTT E F Sbjct: 118 RKEV--ISFAKPYMKVSIGVASKKTNLITKVNQLKGKNLIVNKGTTAETY----FTKEYT 171 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + F+ + AA + R DA T D S L+A D P V + + +S ++P Sbjct: 172 SAKLLKFDSKTQQFAALKDGRADAITDDNSYLFAW--VKDHPDYKVGIKQLGEQSYISPG 229 Query: 230 IIQGDTEWYNIVSW 243 + +G+ + Sbjct: 230 VQKGNKSVLKWTNK 243 >gi|169334518|ref|ZP_02861711.1| hypothetical protein ANASTE_00921 [Anaerofustis stercorihominis DSM 17244] gi|169259235|gb|EDS73201.1| hypothetical protein ANASTE_00921 [Anaerofustis stercorihominis DSM 17244] Length = 280 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 103/258 (39%), Gaps = 15/258 (5%) Query: 2 YKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GD 55 K V++ L+ L + N+S + +K+ G L G+ + G+ Sbjct: 4 KKVMAVTMAALMSLAVFAGCGNKDNANSSEVKLVKE-GTLTVGLEASYPPMEYIDEKTGE 62 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD++ +A++ + +++++ + F L + + D+ R+ +L Sbjct: 63 LAGFDIELAKAIAKDMG---LEVEFVQVGFDAIFAGLDADKYDVAISAISVNKDRQETLA 119 Query: 116 LAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 L + Q I K I SV +LSG + VQ GTT + Y + +++ Sbjct: 120 L--SDTYLANQQVVISAKDGKQIKSVKELSGKKVAVQVGTTADEACQYYQEKEGLEFDLQ 177 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + A ++ D D + N+ P ++V D ++ P+A A + + Sbjct: 178 QLDDMTAAFLALKSGNVDCVVTD--LVVGDYYVNNFPKDYVKSCDKLTNEPIAIAAKKSN 235 Query: 235 TEWYNIVSWTHYAMVTAE 252 T ++ + +++ + Sbjct: 236 TALIAEINKSLKSLIDSG 253 >gi|292670307|ref|ZP_06603733.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas noxia ATCC 43541] gi|292648038|gb|EFF66010.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas noxia ATCC 43541] Length = 267 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 77/251 (30%), Gaps = 12/251 (4%) Query: 3 KDFFVS---ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 K C L A+ + + G++ + GF Sbjct: 4 KKILTGTAVFACAAALLTGCGGDKAAAPDKGADKSKIVVGLDDNFPPMGFKNEKNEIVGF 63 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD + + + + +++ ++ + L+S ++ IL D T R+ + F Sbjct: 64 DVDLAKEAAKRLGRE---VEFKAIDWSSKEAELKSGRVQILWNGLDITEKRKE--NMLFS 118 Query: 120 PITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q + K S L+G +I VQ+ +T E N + Sbjct: 119 NPYMDNRQIIFVKKGSTAVSDEKSLAGKTIGVQSASTAEEYTDTTDFYKNEVKEVKKYPD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEW 237 R DA GD + + P E LP + S A + +T Sbjct: 179 YVAAFMDLENGRLDAVIGDE--IVGRYYMSKHPDELEALPIVVGPVSEFGIAFAKDNTAL 236 Query: 238 YNIVSWTHYAM 248 + V M Sbjct: 237 QSEVQKVIDEM 247 >gi|307729488|ref|YP_003906712.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] gi|307584023|gb|ADN57421.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] Length = 264 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 85/247 (34%), Gaps = 17/247 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K F + LI FT+ + +A +L +K+RG L+ G+ F +G+ G+DV Sbjct: 7 KKLF--AVALIGASFTAVAAHAEDLLDQVKQRGTLRVGLEGTFPPFNSKAPSGELVGYDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +A+++ + P ++ LQ+ + D++ T R+ L F P Sbjct: 65 DIAKAVAARLGVKPE---FITTEWSGIIAGLQAGKFDVIVNQVGITDARK--QALDFSPA 119 Query: 122 TYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I K S+ L G + V GT + Sbjct: 120 YTYSAAQLIQRKDDTRQFKSLDDLKGKKLGVGLGTNYMD-----MAKSVPGIDVKTYPGA 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A R DA D L L + P ++ + +P + + ++ Sbjct: 175 PEYLRDLAAGRLDAALNDRLMLAYLLKNSQLP--LRTGANVGAGNPSGIPFKKNNPKFAK 232 Query: 240 IVSWTHY 246 + Sbjct: 233 AIDDAMT 239 >gi|268319381|ref|YP_003293037.1| ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] gi|262397756|emb|CAX66770.1| ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] Length = 284 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 69/296 (23%), Positives = 119/296 (40%), Gaps = 38/296 (12%) Query: 1 MYKDFFV-------SILCLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGL 44 M K F+ IL + + T+ S N+S + IKKRG +K + L Sbjct: 1 MKKHKFIKKLIAAVGILAVGAVILTACSNNSSSNSSSNNPSSVAAIKKRGTIKVAVFGDL 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 + V +G G+DV R L+ + ++++ +NA R L + + DI+ N Sbjct: 61 PPYGWVNKDGKRVGYDVRLARELAKEMGVK---VKFVQVNANNRVDTLNANKADIVLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + K K I++V+QL G + V GTT E +YF Sbjct: 118 TVTSERK--QVVDFAKPYMKVSVGVVSPKSKPITNVNQLKGKKVIVTKGTTAE----NYF 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + + F+ + A + R A D S LYA + P V + + S Sbjct: 172 TSKQPDVDLLKFDSKTQQFNAMKNGRAAALADDNSYLYAW--VKNNPKYTVGIKHLGPNS 229 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280 +APA+ +G+ + + I + N + + N +++ + G D Sbjct: 230 YIAPAVKKGNKSLLDWTNK-----------RINKLNKDGFFVNDYNQELKPYFGDD 274 >gi|307705123|ref|ZP_07642000.1| ABC transporter substrate-binding protein [Streptococcus mitis SK597] gi|307621319|gb|EFO00379.1| ABC transporter substrate-binding protein [Streptococcus mitis SK597] Length = 279 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 91/250 (36%), Gaps = 13/250 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K + ++ L+ LF T+ + AS +++G + G + V + NG + Sbjct: 4 KKIALVLVSLLTLFLTACTQKASDPKQDNWNKYQEQGSITIGFDNTFVPMGFEEKNGQYT 63 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+S + KIQ+ P++ + LQ+ ID + T R +A Sbjct: 64 GFDIDLAQAVSEKLG---FKIQFQPIDWDMKETELQNGTIDAIWNGYSATDER--REKVA 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 F + Q + K + I SV + ++ QAG++ L D K Sbjct: 119 FSIPYMENQQVLVAKKSQQIHSVEDMKDKTLGAQAGSSGYLDFEAQPDLLKNRVKDQKAN 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 ++ E + R DA D + +++ + A + D Sbjct: 179 QYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILNDYNVFSAGFESESFAVGVRPAD 238 Query: 235 TEWYNIVSWT 244 ++ Sbjct: 239 KRLLQALNQA 248 >gi|186473522|ref|YP_001860864.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184195854|gb|ACC73818.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 299 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 84/240 (35%), Gaps = 6/240 (2%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD--- 74 ++ L I++ G + G+ V F+ G+ + + + Sbjct: 21 ACAQEPSATLKKIRETGAISLGVRESSVPFSYYDEQQHVIGYSQAIALKIVDEVKKELNL 80 Query: 75 -PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 K++ +P+ ++ R +Q+ IDI +T T R+ +AF + G I+ K Sbjct: 81 PDLKVREIPITSQNRIPLVQNGTIDIECGSTTHTKERD--NQVAFSNSFFQYGVRMIVKK 138 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + G+ L+ ++ AGT+ E L +M I + E + R A Sbjct: 139 ESGVKDFGDLANKTVVTTAGTSEERLLRQMNAEKSMNMRLISAKDHAESFLNVKTGRAVA 198 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D LY K E++I + D + + + T+ E Sbjct: 199 FVMDDPLLYGAKAKEANADEYLITGTSPMSEVYGCMFRKDDPGFKRLTDGVIARLQTSGE 258 >gi|197334500|ref|YP_002156404.1| lysine-arginine-ornithine-binding periplasmic protein [Vibrio fischeri MJ11] gi|197315990|gb|ACH65437.1| lysine-arginine-ornithine-binding periplasmic protein [Vibrio fischeri MJ11] Length = 258 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 87/251 (34%), Gaps = 23/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L + + K+ ++ GI F+ + +G+ KGFD Sbjct: 1 MKKWLLAAVVASTALTGAAQA---------KEWKQIRFGIEGAYPPFSWTEPSGELKGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + ++ + + + +L +++ D + T R+ + F Sbjct: 52 VDIANALCKEM---EARCKIVAQDWDGIIPSLLARKYDAIIAAMSITEERKK--KIDFTE 106 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F+ K + + L G ++ VQ TT + L D F + Sbjct: 107 KYALIPNKFVAKKGTDLVMTKEGLKGVTVGVQRATTHDKYLTDNF---GKGVVLKRYGSF 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E +A R D GD SAL L E+ + ++ A + D Sbjct: 164 DEAYLDLKAGRIDTVLGDASALEEGLLNKPGGKEYEFVGPSLTDPKWFGEGFGIATRKQD 223 Query: 235 TEWYNIVSWTH 245 + ++ Sbjct: 224 KDLTEQLNAAI 234 >gi|225858524|ref|YP_002740034.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Streptococcus pneumoniae 70585] gi|225721173|gb|ACO17027.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Streptococcus pneumoniae 70585] Length = 286 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 27/259 (10%) Query: 1 MY--KDFFVSILCLIILFF-TSFS-------------TNASILGDIKKRGFLKCGINTGL 44 M K + L F T+ S A + + KK G L+ + Sbjct: 1 MKLFKPLLTVLALAFALIFITACSSGGNAGPSSGKTTAKARTIDENKKSGELRIAVFGDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F V +G ++G+D++ L+ + ++Y+ ++A R L S ++DI N Sbjct: 61 KPFDYVDNDGSYQGYDIELGNQLAQDLGVK---VKYISVDAANRAEYLISNKVDITLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + K I+ V QL G ++ V GTT E F Sbjct: 118 TVTDERKK--QVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETY----F 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + ++ + +++ + A R DA++ D + + A + V + + Sbjct: 172 EKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWA--LENKGFEVGITSLGDPD 229 Query: 225 PLAPAIIQGDTEWYNIVSW 243 +A A+ +G+ E + ++ Sbjct: 230 TIAAAVQKGNQELLDFINK 248 >gi|42518676|ref|NP_964606.1| glutamine ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] gi|41582962|gb|AAS08572.1| glutamine ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] Length = 274 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 88/225 (39%), Gaps = 10/225 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++++ +K+ + G+ F + G +GF+VD +AL+ + +K +++ Sbjct: 29 SSNVYDQVKESKTITWGVKADTRLFGLMSIKTGKIEGFEVDLAKALTKQMLGKDAKAEFV 88 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 K R L++ ID + T R+ + F + GQ ++ I +V Sbjct: 89 QTTPKTRIPLLKNGNIDAILATMTITPDRKK--QVTFSEPYFTAGQSLLVKDDSSIKNVR 146 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + GTT + + + ++ + A +A + A T D L Sbjct: 147 DLNGKTALAVKGTTAVDNVKKFAPKA----TVLEYDDYGQAFTALKAGQGQAMTTDNGLL 202 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + N + ++ + P A+ +G T++ + ++ Sbjct: 203 AGIASENKG---YKLVGGTYTSEPYGIAVEKGQTDFADHINKALN 244 >gi|91783311|ref|YP_558517.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91687265|gb|ABE30465.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 264 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 86/251 (34%), Gaps = 17/251 (6%) Query: 1 MYKDFF--VSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + + LI FT+ + +A +L +K+RG L+ G+ F +G+ Sbjct: 1 MKFGLLKKILVAGLIGASFTAVTAHADDLLDQVKQRGTLRIGLEGTFPPFNSKAPSGELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+DVD +A+++ + P ++ LQ+ + D++ T R+ L Sbjct: 61 GYDVDIAKAVAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDARK--QALD 115 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F P + I K S+ L G + V GT Sbjct: 116 FSPAYTYSAAQLIQRKDDTRQFKSLEDLKGKKLGVGLGTNYMD-----MAKSVPGIDVKT 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E A R DA D L L + P ++ + +P +G+ Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLMKNSPLP--LRTGANVGAGNPSGIPFRKGNP 228 Query: 236 EWYNIVSWTHY 246 ++ + Sbjct: 229 KFAKAIDDAMT 239 >gi|302524588|ref|ZP_07276930.1| glutamate-binding protein [Streptomyces sp. AA4] gi|302433483|gb|EFL05299.1| glutamate-binding protein [Streptomyces sp. AA4] Length = 276 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 51/271 (18%), Positives = 92/271 (33%), Gaps = 21/271 (7%) Query: 6 FVSILCLIILFFTSFSTNASILGD-------IKKRGFLKCGINTGLVGFAEVKANGDWKG 58 +++ + L + S +S + + L GI G ++ +G G Sbjct: 3 IRALVAALFLLVSCVSCGSSTVSKDDPLPTRARDGNHLTIGIRFDAPGLSQRTVDGRLAG 62 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD ++ + +P +I + R L S +D++ T R ++F Sbjct: 63 FDVDVATFVARELGVEPDRITWHETTPARRETDLTSGAVDLVVATYSITDKR--KQRVSF 120 Query: 119 RPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + GQ ++ I+ L+G +C G+T + D F + + Sbjct: 121 AGPYFVTGQDLLVRLTSPDITGPESLNGKRLCSVTGSTPAQMVKDKFAQ---MVKLVEYP 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R + A A++ DA T D L P ++ S + +GDTE Sbjct: 178 RYPDCVTALLANQVDAVTTDAVILAGYAAQ--NPELLKVVGRPFSAERYGIGLRKGDTEG 235 Query: 238 YNIVSWTHY------AMVTAEELGITQKNIN 262 + V A + E I N Sbjct: 236 QHAVDDAIRKMVSTGAWRKSLEANIGPSNYP 266 >gi|227824559|ref|ZP_03989391.1| ABC polar amino acid transporter [Acidaminococcus sp. D21] gi|226905058|gb|EEH90976.1| ABC polar amino acid transporter [Acidaminococcus sp. D21] Length = 274 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 84/258 (32%), Gaps = 19/258 (7%) Query: 1 MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKG 58 M K V +L + +F K+ L+ G F + + + G Sbjct: 19 MKKRTVLVGMLAALTMFAAGCGGK----DAAKESKVLRAGTEPTFAPFEFQEKDSKDFTG 74 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D RA+ + D ++ + A+ S ID+++ T R+ + F Sbjct: 75 FDMDLIRAIGKQMGRD---VEIKNMGFDALIPAINSGNIDVVASGMSITEERKK--AVTF 129 Query: 119 RPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G I+ I S+ L G +I VQ GTT A A F Sbjct: 130 SDPYYTSGLAIIVRNDENNIKSLKDLEGKTISVQIGTTGADKAASVPGAK-----VKTFN 184 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ DA D + + I+ + + P A+ + D++ Sbjct: 185 TNAEVFLELNNKNADAVIIDRPVGAYFLTKEGKGQD-KIVGETMDAEPYGFAVKK-DSKL 242 Query: 238 YNIVSWTHYAMVTAEELG 255 ++ + E Sbjct: 243 AGEINKALGELKKNGEYD 260 >gi|227890384|ref|ZP_04008189.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] gi|227849198|gb|EEJ59284.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] Length = 277 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 88/225 (39%), Gaps = 10/225 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++++ +K+ + G+ F + G +GF+VD +AL+ + +K +++ Sbjct: 32 SSNVYDQVKESKTITWGVKADTRLFGLMSIKTGKIEGFEVDLAKALTKQMLGKDAKAEFV 91 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 K R L++ ID + T R+ + F + GQ ++ I +V Sbjct: 92 QTTPKTRIPLLKNGNIDAILATMTITPDRKK--QVTFSEPYFTAGQSLLVKDDSSIKNVR 149 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + GTT + + + ++ + A +A + A T D L Sbjct: 150 DLNGKTALAVKGTTAVDNVKKFAPKAK----VLEYDDYGQAFTALKAGQGQAMTTDNGLL 205 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + N + ++ + P A+ +G T++ + ++ Sbjct: 206 AGIASENKG---YKLVGGTYTSEPYGIAVEKGQTDFADHINKALN 247 >gi|116696426|ref|YP_842002.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113530925|emb|CAJ97272.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia eutropha H16] Length = 274 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 51/242 (21%), Positives = 85/242 (35%), Gaps = 11/242 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDF 63 + + S + A L DI+K G L G+ F V G DVD+ Sbjct: 7 LLRGAIVAGVAVMASGTALADRLDDIRKAGVLHVGVFDANPPFGFVDPKTHAPAGLDVDY 66 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 ++S + + N R L S+++DI++ N T R +G F + Sbjct: 67 ANEIASRLGVKAE---FRATNPANRIPLLASQKVDIVAANFTITDERRQQIG--FSTPYF 121 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G FI K + +L + V GTT E TL + I ++ Sbjct: 122 ASGLQFIARKG-ALRQPDELKAWRLGVDKGTTQETTLRQRYP----DARVIAYDDSPLAL 176 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A R A+ D + L AL T + I P +++ + + +G+ + Sbjct: 177 QALRTGAIQAFAQDGAKLGALLATLPNRDQFEISPFTLTREYMGVGVPKGEERLQAAIDQ 236 Query: 244 TH 245 Sbjct: 237 IL 238 >gi|312141243|ref|YP_004008579.1| high affinity substrate binding lipoprotein [Rhodococcus equi 103S] gi|311890582|emb|CBH49900.1| putative high affinity substrate binding lipoprotein [Rhodococcus equi 103S] Length = 327 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 48/224 (21%), Positives = 93/224 (41%), Gaps = 10/224 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +++ L I++RG L G++TG + + +GFDVD R ++ + P K+++ Sbjct: 80 DSASLDAIRQRGRLVVGLDTGSNLLSFRNPTTDEIEGFDVDIAREIARDLLGSPDKVEFR 139 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 LN ER AL+ ++DI+++ T R + F + Y Q ++ + VS Sbjct: 140 VLNYAEREQALEDGRVDIVAKTMAITCER--RQRIDFSTVYYDAHQRILVMAGSPVRDVS 197 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G +CV GTT+ + + + + ++ DA + D + L Sbjct: 198 DLAGRRVCVGEGTTSLERIER----QQPDAAVVTVPMWSDCLVMLQQNQVDAISTDDTLL 253 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L + I+ + + QG+ + V+ T Sbjct: 254 LGLATQDPHSR---IVGPNMGDERYGIGVAQGNEDLVRFVNGTL 294 >gi|66045739|ref|YP_235580.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae B728a] gi|302186218|ref|ZP_07262891.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae 642] gi|63256446|gb|AAY37542.1| extracellular solute-binding protein, family 3 [Pseudomonas syringae pv. syringae B728a] Length = 283 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 98/252 (38%), Gaps = 4/252 (1%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + +L T + S L + KRG L G + + A+G +GFD+D Sbjct: 9 KACAFVLSASFMLANTVQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDID 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R ++ +F+DPSK++++ ++ R L + ++DI + T R + +AF Sbjct: 69 IGRIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPY 126 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y +G ++ + L A V + + K ++ V+ + Sbjct: 127 YREGVALLLPANSKYKEIDDLKAAGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + R D D S+ L P + S A A+ +GD +W N V+ Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVN 244 Query: 243 WTHYAMVTAEEL 254 + +T E Sbjct: 245 TALHEAMTGVEF 256 >gi|242280829|ref|YP_002992958.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] gi|242123723|gb|ACS81419.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] Length = 273 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 9/222 (4%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I K ++ GI T + A A +W GFDVD ++ + ++ +N K Sbjct: 28 DRIMKDKVIRVGIMTDSIPGAFYNAKKEWVGFDVDIANEIAKRLGVKIDQVP---VNNKT 84 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R LQ +ID N R+ + F +FDGQ + K S++ G Sbjct: 85 RIGFLQQGRIDASVSNMTHKRSRDK--SIDFSITYFFDGQKMLAPKG-KFSTLKDFVGKK 141 Query: 148 ICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + V GTT+EL + + K+ I +++ E A + R DA++ D + L Sbjct: 142 VAVMQGTTSELNVKNLLKSLGDAAPKVISYQKESECFQALQMGRVDAWSTDSTILLGYAA 201 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 P ++ ++ D S P +++ D++ + V++ M Sbjct: 202 QV--PGKYELVGDFFSNEPYGIGLVEDDSKLRDAVNFALQDM 241 >gi|317053830|ref|YP_004117855.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316951825|gb|ADU71299.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 274 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 97/260 (37%), Gaps = 19/260 (7%) Query: 4 DFFVSILCLIILFFT--------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 L ++ + + + S L + +RG L+ G F +G+ Sbjct: 7 KIIAGALVMLAVSGCTPTEEKKDAGAAPQSALQTVLQRGTLRVGDCLSFAPFGFYDKDGN 66 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+DVD +AL+ + ++ + + R LQ+ ++D++ N L R +G Sbjct: 67 PDGYDVDLAKALAKEMGVK---LEMVNTTSANRIPNLQTNKVDVVFCNFTRNLERAKEIG 123 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + ++ K+ GI S ++G +I G+T D ++ + Sbjct: 124 --FTNPYVVASEAMLVRKESGIKSAHDMAGKTIATVKGSTN----GDEVRSMGIDVKIQE 177 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + A + + DA D + L P+ V ++ A + QGD Sbjct: 178 YDSSQAAILAVKQGQADAMIEDNNFLAYQAKL--DPTLTVTNEALVPLEYNAFGVKQGDQ 235 Query: 236 EWYNIVSWTHYAMVTAEELG 255 W N ++ + + + E Sbjct: 236 VWLNYLNEFLFEINASGENA 255 >gi|223932683|ref|ZP_03624682.1| extracellular solute-binding protein family 3 [Streptococcus suis 89/1591] gi|330832443|ref|YP_004401268.1| extracellular solute-binding protein family 3 [Streptococcus suis ST3] gi|223898653|gb|EEF65015.1| extracellular solute-binding protein family 3 [Streptococcus suis 89/1591] gi|329306666|gb|AEB81082.1| extracellular solute-binding protein family 3 [Streptococcus suis ST3] Length = 279 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 100/256 (39%), Gaps = 19/256 (7%) Query: 4 DFFVSILCLIILF--------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-G 54 V L L + + TN+ + I RG L+ G+ + F + G Sbjct: 13 RLLVFGLILFVFAKQPVAQTETPASITNSDQVQAIIDRGVLRVGVKQDVPNFGYKNPDTG 72 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 +++G ++D R ++ + D I++ P+ A+ R L + Q+D++ T R+ L Sbjct: 73 EFEGMEIDIARKIADELGVD---IEFTPVTAQTRGPLLDNGQVDMVIATFTITEERK--L 127 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y D GF+++K GI + + L G +I V G+ T ++ + + + Sbjct: 128 LYNFTTPYYTDAVGFLVNKDSGIKTFTDLDGKTIGVAQGSITRTLISKLADKYGISVNFA 187 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E+ + RAHR DA++ D S L + + S S + Sbjct: 188 ELGSYPELSVSLRAHRTDAFSVDQSILSGYISSKSELMDF-----SFSASDYGIVTKLSN 242 Query: 235 TEWYNIVSWTHYAMVT 250 + N ++ Sbjct: 243 KDLNNYLNSLVEKWTA 258 >gi|16262719|ref|NP_435512.1| ABC transporter periplasmic substrate-binding protein [Sinorhizobium meliloti 1021] gi|14523345|gb|AAK64924.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium meliloti 1021] Length = 265 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 90/242 (37%), Gaps = 10/242 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 + + + +AS L DI R + G++ + F G DVD + L+ + Sbjct: 17 AITVGAATASASSLDDIIARKKVMIGVDLSVPPFGITNEEMQPDGLDVDVAKLLAKDLGV 76 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 + ++ +P+ + R +LQ+ ++D + + R +L +AF I K Sbjct: 77 E---LELVPVTGQSRIPSLQTGKVDFVVASFGIYTER--ALSVAFSNPYGGHRSIIIAPK 131 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + I S++ L+G + V GT E L+ A+ + F+ A + + DA Sbjct: 132 EATIKSLADLAGKRVGVPRGTAHEKILS---AANVEGMELVRFDDDSTTLNALVSGQVDA 188 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L+ + S + + D + + ++ + + E Sbjct: 189 IGTVNYIAAQLQERYPDRGFEEKTTYLQSF--YGVGLRRNDPDLLHWLNTVLFVHKQSGE 246 Query: 254 LG 255 LG Sbjct: 247 LG 248 >gi|32490940|ref|NP_871194.1| hypothetical protein WGLp191 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166146|dbj|BAC24337.1| fliY [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 290 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 107/253 (42%), Gaps = 13/253 (5%) Query: 3 KDFFVSIL--CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 K+FF S+L ++I FF + AS L DIKK G L+ I F ++ G+ Sbjct: 34 KNFFNSLLKSIILISFFIFNLSFASKLEDIKKSGLLRVAIFDSNPPFGKIDLKNHSIIGY 93 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D DF + +++ + ++ +P N R LQS ++D++ + T RE + F Sbjct: 94 DADFSKEIANILGVK---LKLIPTNPSNRIPLLQSGKVDLIIADITITKEREKV--INFS 148 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q +++K + + S I GTT + TL D I +E + Sbjct: 149 VPYFVTHQKLLVNKYSS-NELKDYSFDKIGAVKGTTGQKTLHDILPKA----QIISYEDI 203 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +A R A T D + L L L ++ IL + ISK + + +G+ + + Sbjct: 204 PMAFSALRNGNVKAITQDSTILSGLLLAAPDKDKYKILQETISKEVIGIGVKKGEDDLLS 263 Query: 240 IVSWTHYAMVTAE 252 V+ + + Sbjct: 264 EVNKALKILEESG 276 >gi|325673926|ref|ZP_08153616.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Rhodococcus equi ATCC 33707] gi|325555191|gb|EGD24863.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Rhodococcus equi ATCC 33707] Length = 327 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 48/224 (21%), Positives = 93/224 (41%), Gaps = 10/224 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +++ L I++RG L G++TG + + +GFDVD R ++ + P K+++ Sbjct: 80 DSASLDAIRQRGRLVVGLDTGSNLLSFRNPTTDEIEGFDVDIAREIARDLLGSPDKVEFR 139 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 LN ER AL+ ++DI+++ T R + F + Y Q ++ + VS Sbjct: 140 VLNYAEREQALEDGRVDIVAKTMAITCER--RQRIDFSTVYYDAHQRILVMAGSPVRDVS 197 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G +CV GTT+ + + + + ++ DA + D + L Sbjct: 198 DLAGRRVCVGEGTTSLERVER----QQPDAAVVTVPMWSDCLVMLQQNQVDAISTDDTLL 253 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L + I+ + + QG+ + V+ T Sbjct: 254 LGLATQDPHSR---IVGPNMGDERYGIGVAQGNEDLVRFVNGTL 294 >gi|218678693|ref|ZP_03526590.1| putative substrate-binding component of ABC transporter [Rhizobium etli CIAT 894] Length = 277 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 100/258 (38%), Gaps = 6/258 (2%) Query: 1 MYKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M F ++ L L T S L ++ RG L G + + A+ +G Sbjct: 1 MTISFRTGVMSLITAALLSTPALAEGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD ++ A+F DP KI+Y+ ++ R + + ++DI + T R + +AF Sbjct: 61 FDVDMGHIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAF 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y +G G ++ + + L A V + A + +E Sbjct: 119 TIPYYREGVGLMLKADGKYADYAALKAAGSSVTISVLQNVYAETMVHAALPEATVDQYES 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 V+ I A + R DA D S+L P + + A A+ +GD +W Sbjct: 179 VDLIYQALESGRADAVATDQSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWL 236 Query: 239 NIVSWTHYAMVTAEELGI 256 N V+ + +T + + Sbjct: 237 NFVNTALHEAMTGVKFRL 254 >gi|227546749|ref|ZP_03976798.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212711|gb|EEI80592.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 279 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 91/249 (36%), Gaps = 17/249 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + + + + + G ++ GI G +G + GFDVD Sbjct: 13 RVIAALAAVACTMSLAACGAD--------ETGKIRIGIKFDQPGLGFK-KSGTYVGFDVD 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + ++ + +I + +K+R +Q+ +D++ T R+ ++F Sbjct: 64 VAKYIAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKK--AVSFAGPY 121 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + GQ ++ K I+ L+G +C G+T+ T+ + F + + + E Sbjct: 122 FVAGQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFAS---EVQLMEQPGYAE 178 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + DA T D L L + ++ ++ I +GDT+ + Sbjct: 179 CATALFSGIVDAVTTDDIILAGLASASRGK--LKVVGKPFTQEYYGVGIKKGDTQLATKI 236 Query: 242 SWTHYAMVT 250 + M+ Sbjct: 237 NNAIVDMIQ 245 >gi|116334344|ref|YP_795871.1| amino acid ABC transporter periplasmic protein [Lactobacillus brevis ATCC 367] gi|116099691|gb|ABJ64840.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus brevis ATCC 367] Length = 278 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 95/266 (35%), Gaps = 20/266 (7%) Query: 1 MYKDFF--------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK- 51 M K V++ +I ++ ++ ++ +K + G+ F + Sbjct: 1 MKKWIRSLSLLLSLVALTAVISGCGSTALSSRNVWKTDQKSKTITWGVKADTRLFGLLDT 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G KGF+VD +AL+ + +K +++ + + R L++ ID + T R Sbjct: 61 KDGKIKGFEVDLAKALTKQMLGKNAKAKFIQVTSSTRMPMLKNGNIDAIIATMTNTAERR 120 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV--QAGTTTELTLADYFKAHNM 169 + F ++ GQ ++ + I +V L+ V G+ + + Sbjct: 121 K--QVDFSNTYFYAGQSLLVKQGSSIKNVKDLNKQKGTVLGVVGSDSVENVQKVAP---- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + A ++ + A T D LY + + N +V+ P A Sbjct: 175 NATVLQLTDYAQAMTALKSGQGQALTTDNGILYGMSVQNPG---YVVTGGTFVSEPYGIA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255 + + ++ V+ + E Sbjct: 232 MDKNQQQFEAAVNQALKEVRANGEYN 257 >gi|42519232|ref|NP_965162.1| ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] gi|41583520|gb|AAS09128.1| ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] Length = 284 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 69/296 (23%), Positives = 117/296 (39%), Gaps = 38/296 (12%) Query: 1 MYKDFFV--SILCLIILFFTSFSTNA--------------SILGDIKKRGFLKCGINTGL 44 M K F+ I + IL + + A S + IKKRG LK + L Sbjct: 1 MKKHKFIKKLIAAVGILSVGAVTLTACSNNSSSSSSSNNPSSVAAIKKRGTLKVAVFGDL 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 + V +G G+DV R L+ + ++++ +NA R L + + DI+ N Sbjct: 61 PPYGWVNKDGKRVGYDVRLARELAKEMGVK---VKFVQVNANNRVDTLNANKADIVLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F G + K K I++V+QL G + V GTT E +YF Sbjct: 118 TVTPERK--QVVDFAKPYMKVSVGVVSPKSKPITNVNQLKGKKVIVTKGTTAE----NYF 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + + F+ + A + R A D S LYA + P V + + S Sbjct: 172 TSKQPDVDLLKFDSKTQQFNAMKNGRAAALADDNSYLYAW--VKNNPKYTVGIKHLGPNS 229 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280 +APA+ +G+ + + I + N + + N +++ + G D Sbjct: 230 YIAPAVKKGNKSLLDWTNK-----------HINKLNKDGFFINDYNQELKPYFGDD 274 >gi|327390344|gb|EGE88685.1| major cell-binding factor [Streptococcus pneumoniae GA04375] Length = 254 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 98/241 (40%), Gaps = 11/241 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ F Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K +K+ + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + +TE+ + + Sbjct: 176 AHRIDAFSVDRSILSGYTSKRT-----ALLDDSFKPSDYGIVTKKSNTEFNDYLDNLVTK 230 Query: 248 M 248 Sbjct: 231 W 231 >gi|320530706|ref|ZP_08031750.1| Tat pathway signal sequence [Selenomonas artemidis F0399] gi|320136993|gb|EFW28931.1| Tat pathway signal sequence [Selenomonas artemidis F0399] Length = 268 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 38/243 (15%), Positives = 76/243 (31%), Gaps = 7/243 (2%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 +++ ++L A+ +G + G++ + GFDVD + Sbjct: 12 AAMMSALLLTGCGGGDKAAAPAKDGDKGKIVVGLDDNFPPMGFKDEKNEIVGFDVDLAKE 71 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + + + +++ ++ + L+S ++ IL D T R+ + F Sbjct: 72 AAKRLGRE---VEFKAIDWSSKEAELKSGRVQILWNGLDITEKRKE--NMLFSDPYMDSQ 126 Query: 127 QGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 Q + K I+ L+G I Q+ +T E + + Sbjct: 127 QVIFVRKGDTAITDEQSLAGKVIGTQSASTAEEYIDATDFYKKDVKEVKKYPDFVATFMD 186 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R DA GD + E +P L A + +T + V Sbjct: 187 LENGRLDAVVGDRIVGRYYMSKHPDKIEERNIPIGPKGE-LGIAFAKDNTALRDEVQKVM 245 Query: 246 YAM 248 M Sbjct: 246 NEM 248 >gi|237740706|ref|ZP_04571187.1| solute-binding protein for glutamate/aspartate ABC transporter system [Fusobacterium sp. 2_1_31] gi|229422723|gb|EEO37770.1| solute-binding protein for glutamate/aspartate ABC transporter system [Fusobacterium sp. 2_1_31] Length = 293 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 97/260 (37%), Gaps = 29/260 (11%) Query: 2 YKDFFVSILCLIILFFTSFS------------------TNASILGDIKKRGFLKCGINTG 43 K ++ + + + + A + +IK G ++ G+ T Sbjct: 5 KKILKLATVGIAVFALAACGNKTEEKTEAQAPAQETAVAKARTVQEIKDSGVIRIGVFTD 64 Query: 44 LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F + NG +G+DV F L+ + ++Y+ L+ R ++ + DI++ N Sbjct: 65 KAPFGYIDENGKNQGYDVYFTDRLAKDLGVK---VEYISLDPASRVEYAETGKADIVAAN 121 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R + F G + I SV +L ++ V GTT E Sbjct: 122 FTVTPERAE--KVDFSLPYMKVSLGVVSPDGAVIKSVEELKDKTLIVSKGTTAEYY---- 175 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 F ++ + ++ + A R DA++ D + + A P V + + Sbjct: 176 FSKNHPEVKLQKYDSYADAYNALLDGRGDAFSTDNTEVLAWA--KSNPGFTVGIDSLGDV 233 Query: 224 SPLAPAIIQGDTEWYNIVSW 243 +A A+ +G+T+ N ++ Sbjct: 234 DTIAVAVQKGNTDLLNWINN 253 >gi|167581949|ref|ZP_02374823.1| extracellular solute-binding protein [Burkholderia thailandensis TXDOH] Length = 271 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 91/246 (36%), Gaps = 11/246 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M F + L + L + +A L DIKK G L+ F V G Sbjct: 1 MKFKPFAAWLIGLSLAAAHAAAHADRLDDIKKAGVLRVATFDSNPPFGFVDPKTNRIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ RAL+ + ++ P N R L S ++D++ N T R + F Sbjct: 61 DVDYARALADKLGVK---LKLQPTNPANRIPFLTSGKVDLVLANFTITGERAK--QVDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F+ K + S QL+ I GTT E+TL + + + ++ Sbjct: 116 IPYFASGQQFLAKKG-VLKSADQLNRLRIGADKGTTNEVTLREKYPQA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + + IS + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEVPAFSISNDYMGVGAPKGETRLVA 230 Query: 240 IVSWTH 245 V+ T Sbjct: 231 FVNDTL 236 >gi|46579379|ref|YP_010187.1| amino acid ABC transporter periplasmic amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120603065|ref|YP_967465.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4] gi|46448793|gb|AAS95446.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120563294|gb|ABM29038.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio vulgaris DP4] gi|311233202|gb|ADP86056.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris RCH1] Length = 272 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 83/226 (36%), Gaps = 14/226 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 S L +I RG L+ G + G + F NG++ GFD+D + ++ A+ + Sbjct: 28 AKKSTLNEIMARGELRVGFDAGYLPFEMTDKNGNYVGFDIDIAKEMARAMGVKFVPVN-- 85 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISS 139 + AL S + DI+ T R +L + F GQ ++ KK + S Sbjct: 86 -TDFDGMIPALLSDKFDIIISGMTVTQER--NLKINFADPYIVVGQTVLLSKKLEGKVKS 142 Query: 140 VSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L+ V + TT E K F++ + R DA+ D Sbjct: 143 WKDLNSPEYTVVSRLGTTGEEAAKRMLPKAKFK----SFDKEADGALEVVNGRADAWVYD 198 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + + V L + PL I +GD ++ N ++ Sbjct: 199 MPFNVVFMAEQGKDKV-VHLDKPFTYEPLGFGIKKGDPDFLNFLNN 243 >gi|238797861|ref|ZP_04641353.1| Extracellular solute-binding protein, family 3 [Yersinia mollaretii ATCC 43969] gi|238718277|gb|EEQ10101.1| Extracellular solute-binding protein, family 3 [Yersinia mollaretii ATCC 43969] Length = 284 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 58/310 (18%), Positives = 100/310 (32%), Gaps = 65/310 (20%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK 77 S + +A L DIK+ G ++ + F + G+DVD A++ + Sbjct: 24 SGAAHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLGVK--- 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ N R L SK++D+++ N T R + F + GQ FI HK + Sbjct: 81 VELRATNPANRIPLLTSKKVDLIAANFTITDERAK--EVNFSLPYFATGQKFIAHKG-VL 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + I GT E+TL +++ I ++ A R A T D Sbjct: 138 KTPEDIRKLRIGADKGTVQEITLREHYPTAK----VISYDDTPLAFTALRNGNVQAITQD 193 Query: 198 ISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L L + I P I+K I +G+ V+ T Sbjct: 194 DAKLVGLLGNLPAAQKADFEISPFSITKEYQGVGIPKGEERLTATVNET----------- 242 Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 + ++K + ++DR G Sbjct: 243 --------------------LVKLEKDGEAAK---------------------IYDRWFG 261 Query: 316 NQSELKIPRG 325 + PRG Sbjct: 262 PATNAAQPRG 271 >gi|152997697|ref|YP_001342532.1| extracellular solute-binding protein [Marinomonas sp. MWYL1] gi|150838621|gb|ABR72597.1| extracellular solute-binding protein family 3 [Marinomonas sp. MWYL1] Length = 268 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 90/252 (35%), Gaps = 18/252 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F ++ ++ + S L + RG L+ G + F GD Sbjct: 1 MKKIFISALALCSATLASASDNDLWEKSTLNQVLNRGELRVCAEAGYMPFDMRDKKGDIV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD + ++ A+ + AL + + DI+ T R +L + Sbjct: 61 GFDVDIAKTMAKAMGVK---LDIRNTAWDGIIPALLTDKCDIIISGMTITPER--NLKVN 115 Query: 118 FRPITYFDGQGFIMHK--KKGISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHP 173 F GQ ++ K +++ L+ +I + G T++ + Y Sbjct: 116 FTDPYIVVGQTILLSPKFKGKVTNYRDLNDAKYTIATKLGATSDYAVKRYM----SNAKL 171 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +FE E DA+ D+ N+ H L + + PL AI +G Sbjct: 172 NLFETESEGVLEVVNGNADAFVYDLPYNAIYSAQNEGKVVH--LDESFTYEPLGFAIRKG 229 Query: 234 DTEWYNIVSWTH 245 D ++ N ++ Sbjct: 230 DPDFMNFLNNYL 241 >gi|258645927|ref|ZP_05733396.1| CjaA protein [Dialister invisus DSM 15470] gi|260403296|gb|EEW96843.1| CjaA protein [Dialister invisus DSM 15470] Length = 289 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 100/259 (38%), Gaps = 27/259 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI----------------LGDIKKRGFLKCGINTGL 44 M K + + ++ +F+ + DIK+ G L G+ + Sbjct: 1 MLKKLSYILAAITLVCTMAFAAGCGSKNSDDKQAAQKASFRSIADIKQSGKLIIGVFSDK 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F + +G+++G+DV F L+ + Y+ L R ++ ++DI+ N Sbjct: 61 APFGYIDKDGNYQGYDVYFAERLAKDMGVKAE---YISLEPANRVEYAKTGKVDIVLANF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R + F G + KK I+S+ QL + V GTT E F Sbjct: 118 TVTKERAE--QVDFALPYMKVALGVVSPKKDNITSIDQLKDKLLIVAKGTTAETY----F 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 H+ + + F++ E A R A++ D + + A + P V + + Sbjct: 172 DKHHPEIKLLKFDQYTETFNALLDGRGAAFSTDNTEVLAWAM--KNPDFKVGITSLGDLD 229 Query: 225 PLAPAIIQGDTEWYNIVSW 243 +APA+ +G+ E ++ Sbjct: 230 TIAPAVQKGNKELLAYIND 248 >gi|54308668|ref|YP_129688.1| hypothetical protein PBPRA1475 [Photobacterium profundum SS9] gi|46913097|emb|CAG19886.1| hypothetical binding protein component ofABC transporter [Photobacterium profundum SS9] Length = 265 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 92/249 (36%), Gaps = 15/249 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + ++ ++ T IL DI K G L+ + G + F NG + GFD Sbjct: 1 MRKLLGGIVAAVALMSTSAAVTAGPILDDIAKSGELRVCFDAGYMPFEMKSKNGSFIGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + I L + + +++ R ++ + F Sbjct: 61 IDIGKQMARQMGVKYVPIN---TAWDGIIPTLLTGKCHMINAGMTINAQR--NMRVNFAD 115 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ +++ + I+S L+ +I + GTT E + + VF Sbjct: 116 PYIVIGQSILINPELEGEITSYKDLNDSKYTIATKLGTTGEQAIKRMISKAKLN----VF 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E + + DA+ D+ ND H L + PL AI QGD++ Sbjct: 172 ETQSDAVLEVANGKADAFIYDMPFNAIYASQNDGKVIH--LEQPFTYEPLGWAIAQGDSD 229 Query: 237 WYNIVSWTH 245 N ++ Sbjct: 230 MLNFLNNFL 238 >gi|296162377|ref|ZP_06845170.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295887410|gb|EFG67235.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 273 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 53/255 (20%), Positives = 96/255 (37%), Gaps = 10/255 (3%) Query: 1 MYKDFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + +L L +L F S A L +K RG L GI V F + + G G Sbjct: 1 MSKRSWWVVLMLFVLGFGGLSGGARADELEMVKARGKLIVGIRNDYVPFGYLDSKGQLVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD ++ +F + I+++P+ A R L + +ID++ R + F Sbjct: 61 FEVDLASFVAKDLFGSETAIEFVPVVASNRIELLNAGRIDVIFATLGKNPDRAKV--IDF 118 Query: 119 RPITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G + K I+ L G +C G L + A ++F Sbjct: 119 TNPYYMMAGMVLLAPKNTTIAKWEDLKGRKVCGSQGNMYNRALQEKLGA-----DTVLFT 173 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + A++ +RC+A D L + + I + P+A + + + ++ Sbjct: 174 ATAPMYKAFQDNRCEAIAYDGPNLTLKVNEDGWKDKDKITLEAYEYVPIAGGVRKNEPKF 233 Query: 238 YNIVSWTHYAMVTAE 252 ++ + A Sbjct: 234 LAALNQSIRKAEAAG 248 >gi|294782141|ref|ZP_06747467.1| CjaA protein [Fusobacterium sp. 1_1_41FAA] gi|294480782|gb|EFG28557.1| CjaA protein [Fusobacterium sp. 1_1_41FAA] Length = 293 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 98/260 (37%), Gaps = 29/260 (11%) Query: 2 YKDFFVSILCLIILFFTSFS------------------TNASILGDIKKRGFLKCGINTG 43 K ++ + + + + A + +IK G ++ G+ T Sbjct: 5 KKILKLATVGVAVFALAACGNKTEEKTEAQAPAQEASVAKARTVQEIKDSGVIRIGVFTD 64 Query: 44 LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F + NG +G+DV F L+ + +++Y+ L+ R ++ + DI++ N Sbjct: 65 KAPFGYIDENGKNQGYDVYFTDRLAKDLG---VQVEYISLDPASRVEYAETGKADIVAAN 121 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R + F G + I SV +L ++ V GTT E Sbjct: 122 FTVTPERAE--KVDFSLPYMKVSLGVVSPDGAVIKSVEELKDKTLIVSKGTTAEYY---- 175 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 F ++ + ++ + A R DA++ D + + A P V + + Sbjct: 176 FSKNHPEVKLQKYDSYADAYNALLDGRGDAFSTDNTEVLAWA--KSNPGFTVGIESLGDV 233 Query: 224 SPLAPAIIQGDTEWYNIVSW 243 +A A+ +G+T+ + ++ Sbjct: 234 DTIAVAVQKGNTDLLDWINN 253 >gi|152985201|ref|YP_001351134.1| putative ABC transporter binding protein subunit [Pseudomonas aeruginosa PA7] gi|150960359|gb|ABR82384.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa PA7] Length = 266 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 89/250 (35%), Gaps = 14/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L + L + + A + D KRG L+ G++ + F G GF+ Sbjct: 1 MKKYLASLVLGVCALLGVASAQAAGAVEDAVKRGTLRVGMDPTYMPFEMTNKRGQIIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ ++ + + AL + + D++ T R +L L F Sbjct: 61 VDLLKAMAKSMGVK---LELVSTSYDGIIPALLTGKFDMIGSGMTLTQER--NLRLNFSE 115 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K+ I S L+ + + TT E+ F Sbjct: 116 PFIVVGQTLLVRKELEGKIKSYKDLNDPQYSITSKIGTTGEIVARKLISKAKYHG----F 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + E + DA+ D V L + PLA + +GD + Sbjct: 172 DNEPEAVMDVVNGKADAFIYDSPYNVVAVSKFGAGK-LVYLDQPFTYEPLAFGLKKGDYD 230 Query: 237 WYNIVSWTHY 246 N ++ + Sbjct: 231 SINFINNFLH 240 >gi|296454584|ref|YP_003661727.1| family 3 extracellular solute-binding protein [Bifidobacterium longum subsp. longum JDM301] gi|296184015|gb|ADH00897.1| extracellular solute-binding protein, family 3 [Bifidobacterium longum subsp. longum JDM301] Length = 279 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 91/249 (36%), Gaps = 17/249 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + + + + + G ++ GI G +G + GFDVD Sbjct: 13 RVIAALAAVACTMSLAACGAD--------ETGKIRIGIKFDQPGLGFK-KSGTYVGFDVD 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + ++ + +I + +K+R +Q+ +D++ T R+ ++F Sbjct: 64 VAKYIAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKK--AVSFAGPY 121 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + GQ ++ K I+ L+G +C G+T+ T+ + F + + + E Sbjct: 122 FVAGQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFAS---EVQLMEQPGYAE 178 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + DA T D L L + ++ ++ I +GDT+ + Sbjct: 179 CATALFSGIVDAVTTDDIILAGLASASRGK--LKVVGKPFTQEHYGVGIKKGDTQLATKI 236 Query: 242 SWTHYAMVT 250 + M+ Sbjct: 237 NNAIVDMIQ 245 >gi|306823262|ref|ZP_07456638.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium dentium ATCC 27679] gi|309801896|ref|ZP_07696011.1| ABC transporter glutamine-binding protein GlnH [Bifidobacterium dentium JCVIHMP022] gi|304553894|gb|EFM41805.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium dentium ATCC 27679] gi|308221452|gb|EFO77749.1| ABC transporter glutamine-binding protein GlnH [Bifidobacterium dentium JCVIHMP022] Length = 270 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 91/251 (36%), Gaps = 15/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ +F S G ++ GI G NG + GFD Sbjct: 1 MLRRAVATLCACACVFAVSACGADD------ADGKIRIGIKFDQPGLGFK-KNGTYVGFD 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + +I + +K+R LQ+ +D + T R+ ++F Sbjct: 54 VDVAKYVAKKLGYSEDQIVWKEAPSKQREAMLQNGDVDFIVATYSITDERKKV--VSFAG 111 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ ++ K I L+G +C G+T+ +T+ + F + + + Sbjct: 112 PYFVAGQDLLVRKDETSIKGPEDLNGKRLCSVIGSTSAVTVKEKFAS---EVQLMEQPGY 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + DA T D L L ++ ++ I +GDT+ Sbjct: 169 AECATALFSGIVDAVTTDDIILAGLASAAR--GRLRVVGKPFTQEYYGVGIKKGDTQLAT 226 Query: 240 IVSWTHYAMVT 250 ++ M+ Sbjct: 227 KINNDIADMIQ 237 >gi|331270073|ref|YP_004396565.1| amino acid ABC transporter periplasmic amino acid-binding protein [Clostridium botulinum BKT015925] gi|329126623|gb|AEB76568.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Clostridium botulinum BKT015925] Length = 265 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 87/251 (34%), Gaps = 19/251 (7%) Query: 5 FFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 ++ + L++L S S ++ + L +K G L+ G++ + Sbjct: 1 MLITTMGLMLLSGCSSSKHSLGRQSGEDNSLKCMKSSGKLRIGLDDSYPPMEFRDEKNNL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D ++ + ++++ L LQSK+ D + T R+ + Sbjct: 61 IGFDIDLSNEIAKKLGVK---VEFVTTEFNGILLGLQSKKFDAIIAGFSITEDRKK--SV 115 Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F GQ + K I +S L + Q G+ + K Sbjct: 116 NFSDPYVLGGQVIAVKKGNTSIKKLSDLKYKIVGCQMGSNGQNCAEKNLKDIK---ELRK 172 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + ++ + + R DA D A + P E +L +++ K P+ A GD Sbjct: 173 YSKITQAFSDMAIGRIDAVIMD--AQVGGYYLSKNPGEFEVLNEMVVKQPMGIAFKIGDN 230 Query: 236 EWYNIVSWTHY 246 N V Sbjct: 231 ALKNEVQKIVN 241 >gi|322374408|ref|ZP_08048922.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C300] gi|321279908|gb|EFX56947.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C300] Length = 279 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 90/253 (35%), Gaps = 14/253 (5%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + +L L F T+ + AS +K+G + G + V + NG Sbjct: 1 MKRKKIALVLALFFSFFLTACTQKASDPNQDNWAKYQKQGSITIGFDNTFVPMGFEEKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D +A+S + +I++ P++ + LQ+ ID + T R+ Sbjct: 61 QYAGFDIDLAQAVSEKLG---IQIKFQPIDWDMKETELQNGTIDAIWNGYTATDERKE-- 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKY 171 +AF + Q + K + I S+ ++ + QAG++ L + K Sbjct: 116 KVAFTIPYMENQQVLVSKKSQNIHSIQDMTDKVLGAQAGSSGYLNFEGQPELLKNQVKDQ 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ E + R DA D + +++ + A + Sbjct: 176 KANQYQSFNEALIDLKNDRIDALVIDRVYANYYLQSEGILNDYNVFSAGFESEAFAVGVR 235 Query: 232 QGDTEWYNIVSWT 244 D ++ Sbjct: 236 PADKTLLAALNQA 248 >gi|170748673|ref|YP_001754933.1| extracellular solute-binding protein [Methylobacterium radiotolerans JCM 2831] gi|170655195|gb|ACB24250.1| extracellular solute-binding protein family 3 [Methylobacterium radiotolerans JCM 2831] Length = 307 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 84/226 (37%), Gaps = 7/226 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQY 80 L +K + G V F+ + A+ G+ +D C ++ A+ +++ Sbjct: 32 GTLKKVKDANAIVIGYRDASVPFSYLGADQKPIGYAMDICYKIADAVKAKLNLPNLEVKL 91 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P+ + R + + ID+ +T RE + F + ++ K + ++ Sbjct: 92 NPVTSATRIPLMANGTIDLECGSTTNNAEREK--QVWFTNSHFLTATRYVSKKSANLHTI 149 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G ++ +GTT + + + + + E R A+ D Sbjct: 150 EDLKGKTVVSTSGTTNIKQINEANTERKLGLTILPAKDHAEAFLMVETGRAAAFVMDDVL 209 Query: 201 LYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTH 245 L +L ++ PS + I + +SK P + + DTE+ + Sbjct: 210 LASLAASSKDPSAYEISTEALSKPEPYGIMLRKDDTEFKKVADDAT 255 >gi|194468162|ref|ZP_03074148.1| extracellular solute-binding protein family 3 [Lactobacillus reuteri 100-23] gi|194453015|gb|EDX41913.1| extracellular solute-binding protein family 3 [Lactobacillus reuteri 100-23] Length = 294 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 82/229 (35%), Gaps = 9/229 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + IKKRG L G++ V K NG G+DVD RA++ + + Sbjct: 34 ANHTDTWERIKKRGTLLIGVDDTFVPMDFRKKNGQLVGYDVDLSRAVAKVLGLKAD---F 90 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 ++ + L++ ID + T R+ + F + GQ ++ K I + Sbjct: 91 QSIDWSMKETELKNGTIDCIWNGYTATPSRQKRIA--FSRVYELSGQSLVVRKDSKIKNF 148 Query: 141 SQLSGASICVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + G ++ +Q +T + Y K PI+++ +A R Sbjct: 149 ADMKGKTLGIQESSTAQTDFDKYPQVLKRLVKGQKPILYQDNSSAFMDLQAGRTQGVLAG 208 Query: 198 ISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGDTEWYNIVSWTH 245 + + ++ +A + +GD N +++ Sbjct: 209 TVYAGYYATHIANSNNYKLISATKYPADRVAIGMRKGDRTLINKINYAL 257 >gi|300703462|ref|YP_003745064.1| amino-acid-binding periplasmic ABC transporter protein [Ralstonia solanacearum CFBP2957] gi|299071125|emb|CBJ42437.1| putative amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum CFBP2957] Length = 284 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 12/233 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 A L DIKK+G L CG+ F+ +K + + G+DVD C A++ ++ P Sbjct: 31 ADQLSDIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDMCNAVAKSLGVKP---VLK 87 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 L R LQ ++D+L+ + RE + F T+ GQ ++ K GI++++ Sbjct: 88 QLAVAARIPELQQGRVDLLAASLTHNKEREA--QIDFSVSTFITGQKAMVRKDSGITTLA 145 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G + G+T E + K + F+ + A + + AY D + L Sbjct: 146 QLDGKKVLTVKGSTMEANIGKAIK----NADIVSFDNSPQALLALQQGKGAAYVNDETTL 201 Query: 202 YALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 ++ I+P +S +A I + + + V+ M + E Sbjct: 202 IGNMAKLGPASKDYAIVPQNLSTEHIALGIRKNEPAFREQVNKVLLGMEASGE 254 >gi|213691606|ref|YP_002322192.1| extracellular solute-binding protein, family 3 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523067|gb|ACJ51814.1| extracellular solute-binding protein, family 3 [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 279 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 91/249 (36%), Gaps = 17/249 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + + + + + G ++ GI G +G + GFDVD Sbjct: 13 RVIAALAAVACTMSLAACGAD--------ETGKIRIGIKFDQPGLGFK-KSGTYVGFDVD 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + ++ + +I + +K+R +Q+ +D++ T R+ ++F Sbjct: 64 VAKYIAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKK--AVSFAGPY 121 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + GQ ++ K I+ L+G +C G+T+ T+ + F + + + E Sbjct: 122 FVAGQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFAS---EVQLMEQPGYAE 178 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + DA T D L L + ++ ++ I +GDT+ + Sbjct: 179 CATALFSGIVDAVTTDDIILAGLASASRGK--LKVVGKPFTQEHYGVGIKKGDTQLATKI 236 Query: 242 SWTHYAMVT 250 + M+ Sbjct: 237 NNAIVDMIQ 245 >gi|113869258|ref|YP_727747.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113528034|emb|CAJ94379.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia eutropha H16] Length = 261 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 83/250 (33%), Gaps = 7/250 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++ + LF A+ + G++ N + GFD Sbjct: 1 MKKIAALLLISSVALFAACGKKEAASAAGADTATKIIVGLDDNFPPMGFRDNNNELVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + S + +++ P++ + L K++D+L T R+ ++F Sbjct: 61 IDMAKEASRRLG---MTVEFKPIDWSAKEAELNGKRVDVLWNGLTITEERKK--NISFTA 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q I+ + + + L+G + Q G++ + + F Sbjct: 116 PYMTNHQIVIVGASSPVKAKADLAGRIVGAQDGSSAVDAIKKESQVAASLKELKTFGDNV 175 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 R DA D + L + R E+ +L + + + D E Sbjct: 176 TALMDLSTGRLDAIVVDE--VVGRYLISKRAGEYKVLEENFGTEEYGVGVRKDDAELLGK 233 Query: 241 VSWTHYAMVT 250 + T +M Sbjct: 234 LDKTLASMKQ 243 >gi|238853885|ref|ZP_04644248.1| glutamine-binding protein [Lactobacillus gasseri 202-4] gi|311111030|ref|ZP_07712427.1| glutamine-binding protein [Lactobacillus gasseri MV-22] gi|238833471|gb|EEQ25745.1| glutamine-binding protein [Lactobacillus gasseri 202-4] gi|311066184|gb|EFQ46524.1| glutamine-binding protein [Lactobacillus gasseri MV-22] Length = 274 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 88/225 (39%), Gaps = 10/225 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +++I +K+ + G+ F + G +GF+VD +AL+ + +K +++ Sbjct: 29 SSNIYEQVKESKTITWGVKADTRLFGLMSIKTGKIEGFEVDLAKALTKQMLGKNAKTEFV 88 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 K R L++ ID + T R+ + F + GQ ++ I +V Sbjct: 89 QTTPKTRIPLLKNGNIDAILATMTITPDRKK--QVTFSEPYFTAGQSLLVKDNSTIKNVK 146 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + GTT + + + ++ + A +A + A T D L Sbjct: 147 DLNGKTALAVKGTTAVDNVKKFAPKAK----VLEYDDYGQAFTALKAGQGQAMTTDNGLL 202 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + N + ++ + P A+ +G T++ + ++ Sbjct: 203 AGIASENKG---YKLVGGTYTSEPYGIAVEKGQTDFADRINKALN 244 >gi|114707671|ref|ZP_01440566.1| putative amino-acid binding periplasmic protein [Fulvimarina pelagi HTCC2506] gi|114536915|gb|EAU40044.1| putative amino-acid binding periplasmic protein [Fulvimarina pelagi HTCC2506] Length = 264 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 86/254 (33%), Gaps = 17/254 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ +L S K + G F + A+G+ +GFD Sbjct: 1 MLKILTSTLVSTTLLAAVPALAQES--DADKDWSNIVVGTEGAYPPFNFLDASGELQGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RAL + + + ++ ALQ+ D++ + T RE + F Sbjct: 59 VDIARALCNEMGVE---CSFVTQEWDGMIPALQNGNFDLIVASMSITPEREE--QIDFTN 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + K I+ ++ LSG +I Q TT +YF + Sbjct: 114 KYYNTPPAVAVLKDSDITDATEEALSGKTIGAQVSTTHARAAEEYFP----DAEVRQYPS 169 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH----VILPDIISKSPLAPAIIQGD 234 EE + R DA D+ L + + + I + + + + Sbjct: 170 AEEYKLDIESGRVDAVLDDVVVLDQWLKSEAGACCKLLGTLPAEEQIYGEGIGIGLRKDN 229 Query: 235 TEWYNIVSWTHYAM 248 + +V+ A+ Sbjct: 230 EKLQGMVNEAIAAI 243 >gi|83745986|ref|ZP_00943042.1| Amino-acid ABC transporter binding protein ybeJ precursor [Ralstonia solanacearum UW551] gi|207741994|ref|YP_002258386.1| substrate-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] gi|83727380|gb|EAP74502.1| Amino-acid ABC transporter binding protein ybeJ precursor [Ralstonia solanacearum UW551] gi|206593380|emb|CAQ60307.1| substrate-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] Length = 299 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 94/252 (37%), Gaps = 7/252 (2%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + + + + L I++ G ++ V F+ G G+ +D C Sbjct: 10 LAVLAVPLAVSAVHAMASTPTLDRIRETGNIRLAYREDSVPFSYTDG-GKPIGYSIDICS 68 Query: 66 ALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + A + K+QYLP+ A R + S + D+ +T + +AF Sbjct: 69 RVVDAIRTSLKRPELKVQYLPVTAANRMDTIASGKADLECGST--NNAPDRREKVAFTIP 126 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y ++ G+ L G ++ G++ + A M + ++ Sbjct: 127 HYITKGRMLVKASSGLQQWEDLHGKTVVAARGSSAADVMHKLNDATGMGMRTVDTNDLKT 186 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + + + DA+ GD L ++ T+D P+E+V+ S A + + D E+ ++ Sbjct: 187 AFSMLSSGKADAFAGDDVLLAGMRATSDNPTEYVVAGKTQLVSSYAMMMSKQDAEFKKLI 246 Query: 242 SWTHYAMVTAEE 253 + ++ E Sbjct: 247 DQSMTRLIVDGE 258 >gi|187923719|ref|YP_001895361.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] gi|187714913|gb|ACD16137.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 264 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 86/251 (34%), Gaps = 17/251 (6%) Query: 1 MYKDFF--VSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + + LI FT+ + +A +L +K+RG L+ G+ F +G+ Sbjct: 1 MKIGLLKKILVAGLIGASFTAVAAHADDLLDQVKQRGTLRIGLEGTFPPFNSKAPSGELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+DVD +A+++ + P ++ LQ+ + D++ T R+ L Sbjct: 61 GYDVDIAKAVAAKLGVKPE---FVTTEWSGIIAGLQANKFDVIVNQVGITDARK--QALD 115 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F P + I K S+ L G + V GT Sbjct: 116 FSPAYTYSAAQLIQRKDDTRQFKSLDDLKGKKLGVGLGTNYMD-----MAKSVPGIDVKT 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E A R DA D L L + P ++ + +P +G+ Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLMKNSQLP--LRTGANVGAGNPSGIPFRKGNP 228 Query: 236 EWYNIVSWTHY 246 ++ + Sbjct: 229 KFAKAIDDAMT 239 >gi|291548166|emb|CBL21274.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Ruminococcus sp. SR1/5] Length = 296 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 83/260 (31%), Gaps = 17/260 (6%) Query: 1 MYKDFFVSILCLII---LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++ + + T S A + L G + F NG++ Sbjct: 1 MKKRTVAVVMAAAMTIGMMVTGVSVQAGVEDK-----TLIVGFDAEYPPFGYKDDNGEYV 55 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D + + + + K P+N + + L S ID + + Sbjct: 56 GFDLDLAQEVCDNLGWELVK---KPINWDSKDMELNSGTIDCIWNGFTINGRED---DYT 109 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA--DYFKAHNMKYHPIV 175 + + Q ++ K I ++ L G ++ VQA + L D + + Sbjct: 110 WSDPYINNEQVIVVAKDSEIEKLADLKGKNVVVQAASAALDALNNDDNKELKDSFASLTE 169 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + DA DI + +VIL + I +G+ Sbjct: 170 NPDYNTAFMNIDSGAADAVAVDIGVANYQLSQRGKDK-YVILDEPIQNEQYGIGFKKGND 228 Query: 236 EWYNIVSWTHYAMVTAEELG 255 E ++V + + E+ Sbjct: 229 ELKDLVWDEVKKLDESGEVD 248 >gi|111023727|ref|YP_706699.1| glutamate-binding protein precursor [Rhodococcus jostii RHA1] gi|110823257|gb|ABG98541.1| glutamate-binding protein precursor [Rhodococcus jostii RHA1] Length = 277 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 82/246 (33%), Gaps = 9/246 (3%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + ++ L ++ G L GI G +G + GFDV+ Sbjct: 11 IGVMALAVVASACGGGEEKSASQSASEGKLTVGIKYDQPGLGLRNPDGSFSGFDVEVAEY 70 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + P +++ + +R +++ ++D + T R+ + F + G Sbjct: 71 VAGKLGVAPENVEFKESPSAQRETLIENGEVDYIVATYSITDARKE--KVDFAGPYFIAG 128 Query: 127 QGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 Q ++ + G +C G+T + D + F+ Sbjct: 129 QSLLVKSDNTDITGPDSLNGGKKLCSVTGSTPAQKVKDTYAQ---DVQLQEFDTYSACVE 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A R DA T D L P E ++ + ++ + +GD E ++ Sbjct: 186 ALRNGAVDAVTTDDIILAGYAAQY--PGELKVVGEPFTEERYGIGLAKGDDETRAKINDA 243 Query: 245 HYAMVT 250 AM+ Sbjct: 244 IDAMIA 249 >gi|311106237|ref|YP_003979090.1| extracellular solute-binding protein, family 3 family protein 5 [Achromobacter xylosoxidans A8] gi|310760926|gb|ADP16375.1| bacterial extracellular solute-binding protein, family 3 family protein 5 [Achromobacter xylosoxidans A8] Length = 263 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 87/253 (34%), Gaps = 11/253 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKR---GFLKCGINTGLVGFAEVKANGDWK 57 M K V + L ++ + + + G++ +N Sbjct: 1 MKKLTAVLLASATALLTACGPSDNAPAAGAQAPAAAKKVVVGLDDNFPPMGFRDSNNQIV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D + S + ++++ P++ + L K++D+L T R+ ++ Sbjct: 61 GFDIDMAKEASKRLG---LEVEFKPIDWSAKEAELNGKRVDVLWNGLTITEERKK--NIS 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + Q I+ + + L+G + Q G++ +A A +K F Sbjct: 116 FTAPYMANHQIIIVGNASPVKLKADLAGKVVGAQDGSSATDAIAKDPVAAQIK-EVKKFG 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A R DA D + L + R E+ +L + + + DTE Sbjct: 175 DNVTALMDLAAGRLDAIVVDE--VVGRYLISKRAGEYRVLDENFGTEDYGVGVRKDDTEL 232 Query: 238 YNIVSWTHYAMVT 250 + T +M Sbjct: 233 LGKLDKTLDSMKQ 245 >gi|295681020|ref|YP_003609594.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295440915|gb|ADG20083.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 266 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 80/250 (32%), Gaps = 14/250 (5%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M ++ L + FT+ + +A +L +K+ G LK G+ F +G +G Sbjct: 1 MKLSKLLINALAISAFSFTAVAAHAEDLLDSVKQAGVLKIGLEGTYPPFDSRNKDGQLEG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD +A+++ + P ++P ALQS + D++ T R L F Sbjct: 61 FDVDVAKAVAAKLGVKPE---FIPTEWSGIIAALQSGKFDVIINQVTITPQR--KQVLDF 115 Query: 119 RPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + I S+ + G T D + + Sbjct: 116 SQPYTYSAAQLIQRADDKREFKSLDEFKGDKKIGVTLGTNY----DQMARAVPGINVQTY 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E A R DA D L + + P + + + + + + Sbjct: 172 PGAPEKLRDLAAKRIDATIDDRLMLPYIIKNSQLPLRTGAVLKGADQE-MGIPFRKDNPK 230 Query: 237 WYNIVSWTHY 246 + + Sbjct: 231 FAKALDDALT 240 >gi|83719161|ref|YP_442971.1| extracellular solute-binding protein [Burkholderia thailandensis E264] gi|167620111|ref|ZP_02388742.1| extracellular solute-binding protein [Burkholderia thailandensis Bt4] gi|257139195|ref|ZP_05587457.1| extracellular solute-binding protein [Burkholderia thailandensis E264] gi|83652986|gb|ABC37049.1| extracellular solute-binding protein [Burkholderia thailandensis E264] Length = 271 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 91/246 (36%), Gaps = 11/246 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M F + L + L + +A L DIKK G L+ F V G Sbjct: 1 MKFKPFAAWLIGLSLAAAHAAAHADRLDDIKKAGVLRVATFDSNPPFGFVDPKTNRIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ RAL+ + ++ P N R L S ++D++ N T R + F Sbjct: 61 DVDYARALADKLGVK---LKLQPTNPANRIPFLTSGKVDLVLANFTITGERAK--QVDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F+ K + S QL+ I GTT E+TL + + + ++ Sbjct: 116 IPYFASGQQFLAKKG-VLKSADQLNRLRIGADKGTTNEVTLREKYPQA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + + IS + +G+T Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEVPAFSISNDYMGVGAPKGETRLVA 230 Query: 240 IVSWTH 245 V+ T Sbjct: 231 FVNDTL 236 >gi|218886440|ref|YP_002435761.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757394|gb|ACL08293.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 272 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 49/228 (21%), Positives = 82/228 (35%), Gaps = 14/228 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 S L +I RG L+ G + G + F NG++ GFD+D + L+ A+ + Sbjct: 28 AKKSTLNEIMARGELRVGFDAGYMPFEMTDKNGNYVGFDIDLAKELAKAMGVKFVPVN-- 85 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISS 139 + AL S + DI+ T R +L + F GQ I+ KK + + Sbjct: 86 -TDFDGMIPALLSDKFDIIISGMTVTQER--NLRINFANPYIVVGQSVIVSKKHEGKVKT 142 Query: 140 VSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L+ V + TT E K FE+ + + DA+ D Sbjct: 143 WEDLNKPEYTVVSRLGTTGEEAAKRMLPKAKYK----SFEKEADGALEVINGKADAWVYD 198 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + + L + PL I +GD ++ N + Sbjct: 199 MPFNVVFMAEQGKGKA-IHLDKPFTYEPLGFGIKKGDPDFLNFLDNFL 245 >gi|310640485|ref|YP_003945243.1| amino acid abc transporter [Paenibacillus polymyxa SC2] gi|309245435|gb|ADO55002.1| Amino acid ABC transporter [Paenibacillus polymyxa SC2] Length = 255 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 101/286 (35%), Gaps = 33/286 (11%) Query: 1 MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F ++ LI++ S K L GI+ N + GF Sbjct: 1 MRKAAMFTMMIGLIMIVLAGCSGG-------KDNSKLIIGIDDKFAPMGFRDENNELTGF 53 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D+ +A + ++++ P++ + L S +ID++ T R+ + F Sbjct: 54 DIDYAKAAGEQMGK---QVEFQPIDWSAKESELNSGRIDLIWNGYTITDERKE--KVLFT 108 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ +S ++ L+G ++ +Q ++ L D + + Sbjct: 109 KPYLKNSQVIVVPATSSLSKLADLAGKTVGLQTLSSAADAL-DANPIKSKLKSVSEYPDN 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + A + + +L + ++ + +G+ E Sbjct: 168 VLALTDLKTGRLDAVVIDE--VVAKYYMSKEQGTYKLLDESLAPEEYGIGVKKGNEELLT 225 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKSSN 284 + +++ K+ ++ +++ G DK N Sbjct: 226 QLQSAL----------------DELHKNGKAAEISKKWFGEDKVLN 255 >gi|227878270|ref|ZP_03996234.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus crispatus JV-V01] gi|256844164|ref|ZP_05549651.1| ABC transporter [Lactobacillus crispatus 125-2-CHN] gi|256850464|ref|ZP_05555891.1| amino acid ABC transporter [Lactobacillus crispatus MV-1A-US] gi|262047797|ref|ZP_06020748.1| amino acid ABC transporter substrate-binding protein [Lactobacillus crispatus MV-3A-US] gi|293381401|ref|ZP_06627400.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus crispatus 214-1] gi|312976723|ref|ZP_07788472.1| glutamine ABC transporter, substrate binding protein [Lactobacillus crispatus CTV-05] gi|227862140|gb|EEJ69695.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus crispatus JV-V01] gi|256614069|gb|EEU19271.1| ABC transporter [Lactobacillus crispatus 125-2-CHN] gi|256712669|gb|EEU27663.1| amino acid ABC transporter [Lactobacillus crispatus MV-1A-US] gi|260571926|gb|EEX28496.1| amino acid ABC transporter substrate-binding protein [Lactobacillus crispatus MV-3A-US] gi|290922009|gb|EFD99012.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus crispatus 214-1] gi|310896051|gb|EFQ45116.1| glutamine ABC transporter, substrate binding protein [Lactobacillus crispatus CTV-05] Length = 271 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 85/251 (33%), Gaps = 12/251 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K +L L + S I + + G++ V K NG Sbjct: 1 MKKWILGIVLALTLCLTGCQSVQKEANTQDTWNKIASKKQVVIGLDDSFVPMGFEKKNGQ 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+D+D +A+ K+ + ++ L++ ID+L T R+ Sbjct: 61 LTGYDIDLAKAVFKQYG---IKVSFQTIDWSMNVTELRNGTIDLLWNGYSITPERQK--K 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 +AF + Q ++ K ISS Q+ + +Q G+T E + K ++ Sbjct: 116 VAFSKPYLRNRQVLVVKKDSDISSFKQMKNYELGMQTGSTAEQWYETKQDVLHAKKT-VL 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGD 234 ++ + A R D + SE+ ++ D + A + +GD Sbjct: 175 YDTISNSFLDLNAGRIQGILLDEVYADYYIAHMAKSSEYKVIQNDRVPMDLFAVGMRKGD 234 Query: 235 TEWYNIVSWTH 245 V+ Sbjct: 235 KTLRQKVNQGL 245 >gi|168482841|ref|ZP_02707793.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC1873-00] gi|172043606|gb|EDT51652.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC1873-00] Length = 254 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 54/241 (22%), Positives = 97/241 (40%), Gaps = 11/241 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ F Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K +K+ + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + +TE N + Sbjct: 176 AHRIDAFSVDRSILSGYTSKRT-----ELLDDSFKPSDYGIVTKKSNTELNNYLDNLVTK 230 Query: 248 M 248 Sbjct: 231 W 231 >gi|296131957|ref|YP_003639204.1| extracellular solute-binding protein family 3 [Thermincola sp. JR] gi|296030535|gb|ADG81303.1| extracellular solute-binding protein family 3 [Thermincola potens JR] Length = 274 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 77/222 (34%), Gaps = 7/222 (3%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 +K++G G++ G+ GFDVD + ++S + ++ P+N Sbjct: 37 WEKVKEKGEFVLGLDENFPPMGFRDEKGEIVGFDVDVAKEVTSRLGVK---LKLQPINWD 93 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 + L + ID + T + + F + Q I+ ++++ L+G Sbjct: 94 AKEQELNTGNIDAIWNGFTITE--DRKQNVLFSKPYMKNRQVIIVMNNSNFTNLADLAGK 151 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + +QAG++ LA + F+ DA D + + Sbjct: 152 KLGLQAGSSAADALAGAKDFKAKLGEVVEFDDNMTALMDLEKGGIDAVLMDE-IVARYYI 210 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 T + +L + ++ + D + + T AM Sbjct: 211 TMKNKG-YKVLDEALASEEYGIGFRKNDKQLMEKIQRTLEAM 251 >gi|300362319|ref|ZP_07058495.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus gasseri JV-V03] gi|300353310|gb|EFJ69182.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus gasseri JV-V03] Length = 263 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 82/244 (33%), Gaps = 6/244 (2%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 + + S IK+RG L G++ V + NG GFDVD A+ I Sbjct: 17 ASIGLSGCQRQESSWQKIKERGTLVIGVDDSFVPMDFRQKNGKLVGFDVDLATAVCKKIG 76 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 P + ++ + L++ ID++ T R +AF + Q + Sbjct: 77 LKPD---FQTIDWSMKETELRNGTIDVIWNGYTKTKARAK--KVAFSQPYLENDQILVTR 131 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-PIVFERVEEIDAAYRAHRC 191 KK I + Q+ G + VQ G++ L +Y + ++++ +A R Sbjct: 132 KKDKIDNYRQMKGKVLGVQTGSSGADDLDNYPNVLKKRVKSIVLYDTYNNAFIDLKAGRI 191 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 D + E S + I + D + ++ + Sbjct: 192 TGLLIDGVYANYYLAHSKYQKEFKKEKLPYSSEKFSVGINKKDKILKDKINQALEHLEKT 251 Query: 252 EELG 255 EL Sbjct: 252 GELE 255 >gi|289424115|ref|ZP_06425901.1| amino acid ABC transporter, substrate-binding protein [Peptostreptococcus anaerobius 653-L] gi|289155540|gb|EFD04219.1| amino acid ABC transporter, substrate-binding protein [Peptostreptococcus anaerobius 653-L] Length = 264 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 83/251 (33%), Gaps = 8/251 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K V + +I + ++ K + G++ V + + GFD+ Sbjct: 7 KKLMAVGLGLVIATSLVACKSSEKKADSAKSSKEIVVGLDNTFVPMGFLDEKNELVGFDI 66 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + + +P ++ ++ + +L++K +D L T R+ +AF Sbjct: 67 DLAKEAFKRMGLEP---RFENIDWSTKEQSLENKNVDALWNGYSITEQRKE--KVAFSTP 121 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFERV 179 + Q + KK I + L + QAG+ + + + P ++ Sbjct: 122 YLDNKQIVVSMKKDNIKTFKDLKDKQVGTQAGSASLDAIEANKEFTGLIKGSEPTTYDTF 181 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ R A GD L + ++ +L + K + DT+ Sbjct: 182 DKALRDLEIGRTKAVVGDEVLL-KYYIKQRGADKYQVLDGDLGKEQYGVGFRKDDTKRVE 240 Query: 240 IVSWTHYAMVT 250 + M Sbjct: 241 EFNKVLKEMQE 251 >gi|229490811|ref|ZP_04384646.1| glutamate binding protein [Rhodococcus erythropolis SK121] gi|229322201|gb|EEN87987.1| glutamate binding protein [Rhodococcus erythropolis SK121] Length = 276 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 83/259 (32%), Gaps = 10/259 (3%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F + I+ + G L GI G + +G + GFDV+ Sbjct: 8 RFGIGIMAIAFAATACGGGEEKSASQSAADGTLTVGIKFDQPGLGQRNPDGTFSGFDVEV 67 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 R +++ + P I + + +R +Q+ ++D + T R+ +G F + Sbjct: 68 ARYIANELGVKPEGITFKESPSAQRETLIQNGEVDYIVATYSITDARKEKVG--FAGPYF 125 Query: 124 FDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 GQ ++ + G +C G+T + D F+ Sbjct: 126 IAGQSLLVRSDNTDITGRDSLSGGKKLCSVTGSTPAQKVKDSVP----DVQLQEFDTYSA 181 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A R DA T D L P + ++ + + + + D+E + Sbjct: 182 CVEALRNGAVDAVTTDDIILAGFAAQY--PGQLKVVGEPFTTENYGVGLAKDDSETRGKI 239 Query: 242 SWTHYAMVTAEELGITQKN 260 + M++ N Sbjct: 240 NDAIEKMISTGAWEEAFNN 258 >gi|288561033|ref|YP_003424519.1| amino acid ABC transporter substrate-binding protein [Methanobrevibacter ruminantium M1] gi|288543743|gb|ADC47627.1| amino acid ABC transporter substrate-binding protein [Methanobrevibacter ruminantium M1] Length = 274 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 81/258 (31%), Gaps = 15/258 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG-------DIKKRGFLKCGINTGLVGFAEVKAN 53 M K + + ++ F +++A L G + + N Sbjct: 1 MKKKIAIILGIALLAFLVIGASSAGFLDFLGGDGTATNDDNTFIVGFDAEFPPYGYKDDN 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G++ GFD+D + + + + P++ + L S ID + + Sbjct: 61 GEYVGFDLDLAQEVCDR---NNWTLVKQPIDWDAKDSELDSGSIDCIWNGFTINGRED-- 115 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA-DYFKAHNMKYH 172 + + Q ++ GI+S++ L G + Q ++ L D + Sbjct: 116 -DYTWSEPYIDNKQVVVVKTDSGINSLADLDGKIVETQKDSSALAALEGDNKTLADTFKD 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 CDA DI +++ ++ +L + IS + Sbjct: 175 LTQVADYNTAFMDLETGACDAVAIDIGV-AQYQISQKGSDQYKMLDEEISSEQYGIGFKK 233 Query: 233 GDTEWYNIVSWTHYAMVT 250 G+ + + V T M Sbjct: 234 GNDQLKDQVQKTLDEMFE 251 >gi|219670552|ref|YP_002460987.1| extracellular solute-binding protein family 3 [Desulfitobacterium hafniense DCB-2] gi|219540812|gb|ACL22551.1| extracellular solute-binding protein family 3 [Desulfitobacterium hafniense DCB-2] Length = 274 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 93/261 (35%), Gaps = 20/261 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF-------------LKCGINTGLVGF 47 M K V++ L+ + ++S GD + G + G++ Sbjct: 1 MKKWVAVAMTVLMSGLLLAGCGSSSSAGDANEPGKANTEPEKGAVQQKIVIGLDDTFAPM 60 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 G+ GFDVD + ++S + ++++ P++ + + L SK+ID++ T Sbjct: 61 GFRDDGGNLVGFDVDMAKEVASRL---DMEVEFKPIDWNSKEVELNSKKIDMIWNGLTIT 117 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R +AF + Q ++ I + + L+G + Q G+++ L + Sbjct: 118 KER--LEKIAFSKPYMANRQIVVVLSGSDIKTKADLAGKVVGTQEGSSSVDALNAEPEVT 175 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + R +A GD L N +P + D + Sbjct: 176 GTFKELRTYADFVAVLNELSIGRVEAVVGDEVVL--KYYMNKKPGTFAAIEDNFGEEEYG 233 Query: 228 PAIIQGDTEWYNIVSWTHYAM 248 + + DTE + AM Sbjct: 234 VGLRKDDTELLGKLQGALDAM 254 >gi|301793800|emb|CBW36191.1| putative glutamine-binding protein precursor [Streptococcus pneumoniae INV104] Length = 254 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 11/241 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ F Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K +K+ + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + +TE + + Sbjct: 176 AHRIDAFSVDRSILSGYTSKRT-----ELLDDSFKPSDYGIVTKKSNTELNDYLDNLVTK 230 Query: 248 M 248 Sbjct: 231 W 231 >gi|237745206|ref|ZP_04575687.1| amino acid transporter [Fusobacterium sp. 7_1] gi|229432435|gb|EEO42647.1| amino acid transporter [Fusobacterium sp. 7_1] Length = 291 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 96/258 (37%), Gaps = 27/258 (10%) Query: 2 YKDFFVSILCLIILFFTSFS----------------TNASILGDIKKRGFLKCGINTGLV 45 K ++ + + + + A + +IK G ++ G+ T Sbjct: 5 KKILKLATVGVAVFALVACGNKTEETKTEAPAQETTAKARTVQEIKDSGVIRIGVFTDKA 64 Query: 46 GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 F V NG +G+DV F L+ + ++Y+ L+ R ++ + DI++ N Sbjct: 65 PFGYVDENGKNQGYDVYFTNRLAKDLGVK---VEYISLDPASRVEYAETGKADIVAANFT 121 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 T R + F G + K I S+ +L ++ V GTT E F Sbjct: 122 VTPERAE--KVDFSLPYMKVSLGVVSPDKAVIKSIDELKDKTLIVSKGTTAEYY----FS 175 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 + + ++ + A R DA++ D + + A P V + + Sbjct: 176 KNYPEVKLQKYDSYADAYNALLDGRGDAFSTDNTEVLAWA--KANPGFTVGIDSLGDIDT 233 Query: 226 LAPAIIQGDTEWYNIVSW 243 +A A+ +G+ + + ++ Sbjct: 234 IAVAVQKGNKDLLDWINN 251 >gi|284033844|ref|YP_003383775.1| extracellular solute-binding protein family 3 protein [Kribbella flavida DSM 17836] gi|283813137|gb|ADB34976.1| extracellular solute-binding protein family 3 [Kribbella flavida DSM 17836] Length = 326 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 50/223 (22%), Positives = 97/223 (43%), Gaps = 9/223 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S + IK++G L+ GI+ + G +GFD+D R ++ AIF DP+K++ + Sbjct: 76 GSTMAKIKQQGRLRAGISADSLNLGSRNPITGAIEGFDIDMVREVARAIFGDPNKVELVV 135 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 +++ +R LQ +DI++RN R +AF Y GQ ++ + +++ Sbjct: 136 ISSPQRIPVLQQNTVDIVARNMTINCAR--WQQIAFSAEYYRSGQKVLVQRDSTARTLAD 193 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G +IC AG+T+ L ++ PI + ++ + TGD + L Sbjct: 194 LPGRTICAPAGSTSLDNLKKFYPE----VKPITADTDTGCLVLFQQGKAYGITGDDTVLA 249 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 P ++ S+ P + + + ++ V+ Sbjct: 250 GEAAQ--DPYAKILPEPPFSQEPYGLGMNKDEVDFVQFVNGVL 290 >gi|227534089|ref|ZP_03964138.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239629876|ref|ZP_04672907.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066997|ref|YP_003789020.1| amino acid ABC transporter/signal transduction system periplasmic protein [Lactobacillus casei str. Zhang] gi|227188270|gb|EEI68337.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239527488|gb|EEQ66489.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439404|gb|ADK19170.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus casei str. Zhang] Length = 274 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 80/226 (35%), Gaps = 9/226 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + IL K + G+ F + G +GFDVD +A++ I K Q Sbjct: 29 ADRDILTTAKTTNTIVWGVKADTRLFGLMDIKTGKIEGFDVDMAKAITKQILGSKGKAQL 88 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + + R ++ +D + T R+ L F + + GQ ++ K I SV Sbjct: 89 VQVTSDTRVPMIKGGNVDAVIATMTITPERQKI--LDFSDVYFNAGQSILVKKGSPIKSV 146 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L + + + D K + + A ++ + DA T D Sbjct: 147 KDLKKGTKVIGVQGS---NSVDNVKKAAPDTTVLQLSDYAQAFTALKSGQGDALTTDNGI 203 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 LY + + +++ +K P AI +G + V+ Sbjct: 204 LYGMSEQDPN---YIVTGGTFTKEPYGIAINKGQKPFVQAVNKAIK 246 >gi|170692242|ref|ZP_02883405.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170142672|gb|EDT10837.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 264 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 85/247 (34%), Gaps = 17/247 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K FV+ +I FT+ +A +L +K+RG L+ G+ F +G+ G+DV Sbjct: 7 KKLFVA--AMIGASFTAIPAHADDLLDQVKQRGTLRVGLEGTFPPFNSKAPSGELVGYDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +A+++ + P ++ LQ+ + D++ T R+ L F P Sbjct: 65 DIAKAVAAKLGVKPE---FITTEWSGIIAGLQAGKFDVIVNQVGITDARK--QSLDFSPA 119 Query: 122 TYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I K S+ L G + V GT + Sbjct: 120 YTYSAAQLIQRKDDTRQFKSLDDLKGKKLGVGLGTNYMD-----MAKSVPGIDVKTYPGA 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A R DA D L L + P ++ + +P + + ++ Sbjct: 175 PEYLRDLAAGRLDAALNDRLMLAYLLKNSQLP--LRTGANVGAGNPSGIPFKKNNPKFAK 232 Query: 240 IVSWTHY 246 + Sbjct: 233 AIDDAMT 239 >gi|302540998|ref|ZP_07293340.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Streptomyces hygroscopicus ATCC 53653] gi|302458616|gb|EFL21709.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Streptomyces himastatinicus ATCC 53653] Length = 274 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 44/225 (19%), Positives = 83/225 (36%), Gaps = 11/225 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + S L + + G L+ F +GFDVD +A++ A+ + Sbjct: 35 ASRAQDSTLQKVTRSGTLRVASCLTFPPFGSTDKANKPQGFDVDVAKAMAKALGVK---V 91 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + + R L++ ++D + N T R + F G+ ++ K I+ Sbjct: 92 KIVDTTSANRIPNLRTHKVDAVVCNFTTTAERAKQVA--FSDPYIVAGEVLMVKKSSAIA 149 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S+ LSG + V G+T + K N K ++ A + + DA + Sbjct: 150 SLKDLSGKKVAVTKGSTNGAAV----KEGNPKARIQEYDTSAAAVLAVKQGQADAMV-ED 204 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 S + PS V ++ A + QGD +W ++ Sbjct: 205 SNFLNYQAKL-DPSLKVTKDSVVPLEYNAIGVGQGDPDWLQWINT 248 >gi|22126343|ref|NP_669766.1| cystine transporter subunit [Yersinia pestis KIM 10] gi|45441366|ref|NP_992905.1| cystine transporter subunit [Yersinia pestis biovar Microtus str. 91001] gi|51596053|ref|YP_070244.1| cystine transporter subunit [Yersinia pseudotuberculosis IP 32953] gi|108807218|ref|YP_651134.1| cystine transporter subunit [Yersinia pestis Antiqua] gi|108812438|ref|YP_648205.1| cystine transporter subunit [Yersinia pestis Nepal516] gi|149366208|ref|ZP_01888243.1| putative cystine-binding periplasmic protein [Yersinia pestis CA88-4125] gi|153949990|ref|YP_001401243.1| cystine transporter subunit [Yersinia pseudotuberculosis IP 31758] gi|162420780|ref|YP_001606501.1| cystine transporter subunit [Yersinia pestis Angola] gi|165925949|ref|ZP_02221781.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Orientalis str. F1991016] gi|165938780|ref|ZP_02227335.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Orientalis str. IP275] gi|166010832|ref|ZP_02231730.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Antiqua str. E1979001] gi|166210652|ref|ZP_02236687.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Antiqua str. B42003004] gi|167401164|ref|ZP_02306667.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420150|ref|ZP_02311903.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425781|ref|ZP_02317534.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170024601|ref|YP_001721106.1| cystine transporter subunit [Yersinia pseudotuberculosis YPIII] gi|186895159|ref|YP_001872271.1| cystine transporter subunit [Yersinia pseudotuberculosis PB1/+] gi|218928965|ref|YP_002346840.1| cystine transporter subunit [Yersinia pestis CO92] gi|229896294|ref|ZP_04511464.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis Pestoides A] gi|229897231|ref|ZP_04512387.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229897958|ref|ZP_04513109.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229902811|ref|ZP_04517928.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis Nepal516] gi|270486600|ref|ZP_06203674.1| bacterial extracellular solute-binding protein, family 3 [Yersinia pestis KIM D27] gi|294503991|ref|YP_003568053.1| putative cystine-binding periplasmic protein [Yersinia pestis Z176003] gi|21959325|gb|AAM86017.1|AE013849_8 putative periplasmic cysteine-binding ABC transport protein [Yersinia pestis KIM 10] gi|45436226|gb|AAS61782.1| putative cystine-binding periplasmic protein [Yersinia pestis biovar Microtus str. 91001] gi|51589335|emb|CAH20957.1| putative cystine-binding periplasmic protein [Yersinia pseudotuberculosis IP 32953] gi|108776086|gb|ABG18605.1| cystine-binding periplasmic protein [Yersinia pestis Nepal516] gi|108779131|gb|ABG13189.1| putative cystine-binding periplasmic protein [Yersinia pestis Antiqua] gi|115347576|emb|CAL20486.1| putative cystine-binding periplasmic protein [Yersinia pestis CO92] gi|149292621|gb|EDM42695.1| putative cystine-binding periplasmic protein [Yersinia pestis CA88-4125] gi|152961485|gb|ABS48946.1| cystine-binding periplasmic protein FliY [Yersinia pseudotuberculosis IP 31758] gi|162353595|gb|ABX87543.1| cystine-binding periplasmic protein FliY [Yersinia pestis Angola] gi|165913394|gb|EDR32016.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Orientalis str. IP275] gi|165922153|gb|EDR39330.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Orientalis str. F1991016] gi|165990176|gb|EDR42477.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Antiqua str. E1979001] gi|166207832|gb|EDR52312.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Antiqua str. B42003004] gi|166961845|gb|EDR57866.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049553|gb|EDR60961.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055180|gb|EDR64977.1| cystine-binding periplasmic protein FliY [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751135|gb|ACA68653.1| extracellular solute-binding protein family 3 [Yersinia pseudotuberculosis YPIII] gi|186698185|gb|ACC88814.1| extracellular solute-binding protein family 3 [Yersinia pseudotuberculosis PB1/+] gi|229680258|gb|EEO76357.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis Nepal516] gi|229688999|gb|EEO81064.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229693568|gb|EEO83617.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701217|gb|EEO89246.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis Pestoides A] gi|262361824|gb|ACY58545.1| putative cystine-binding periplasmic protein [Yersinia pestis D106004] gi|262366040|gb|ACY62597.1| putative cystine-binding periplasmic protein [Yersinia pestis D182038] gi|270335104|gb|EFA45881.1| bacterial extracellular solute-binding protein, family 3 [Yersinia pestis KIM D27] gi|294354450|gb|ADE64791.1| putative cystine-binding periplasmic protein [Yersinia pestis Z176003] gi|320015413|gb|ADV98984.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 266 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 81/248 (32%), Gaps = 15/248 (6%) Query: 2 YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + ++ + + + +L +K+RG L G+ F+ +G GF Sbjct: 7 RRRIVLGMVAVALATGLNVKSYAAGDLLEQVKQRGTLIVGLEGTYPPFSFQGEDGKLTGF 66 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VDF AL+ + + P +L+SK+ID+ + R+ F Sbjct: 67 EVDFANALAEHMGVKA---KITPTKWDGMLASLESKRIDVAINQVTISDERKK--KYDFS 121 Query: 120 PITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G + K + L G + V G+ E L + K ++ Sbjct: 122 TPYTVSGIQVLTKKGNEGQFTKPEDLQGKKVGVGLGSNYEQWLRENLK----DVDIRTYD 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R R DA D L AL L + ++ A+ + + E Sbjct: 178 DDPTKYQDLRVGRTDAILVDR--LAALDLVKKTNDALAVAGPAFARQESGVAMRKNNPEL 235 Query: 238 YNIVSWTH 245 V+ Sbjct: 236 LAAVNNAI 243 >gi|330427594|gb|AEC18928.1| extracellular solute-binding protein [Pusillimonas sp. T7-7] Length = 268 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 81/248 (32%), Gaps = 11/248 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + + S + A + ++K++G L G+ + + G+D D R Sbjct: 14 ALLATCTVFALGSSAAVAETIDEVKEKGELTVGMLVDFPPYGILNTENKPDGYDADVARQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + +P+ R L + ++D+L + T R + F Sbjct: 74 LAKELGVK---VNIVPVTGPNRIPFLLTNKVDLLVASLAITPERAKQVQ--FSDPYSAAQ 128 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 K I+ LSG I V +T ++ + + F+ A Sbjct: 129 IVVFGGKDTKIAKAEDLSGLRIGVARASTQDIAVTKISPK---DANIRRFDDDASAMQAL 185 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + DA S A ++ P ++ + +A A+ G+ V+ Sbjct: 186 LSGQVDAI--GCSTTVAGQIAKRSPDRFENKFVLLQQE-MAVAMRPGEPNTLKAVNEAVE 242 Query: 247 AMVTAEEL 254 + E Sbjct: 243 KNIKNGEF 250 >gi|222083302|ref|YP_002542705.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] gi|221738682|gb|ACM39520.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] Length = 272 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 87/254 (34%), Gaps = 10/254 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDV 61 K ++ + L A L DIK +G L CG F+ + G+DV Sbjct: 2 KILTLATTSALALIVGFGPALADRLDDIKTKGLLVCGTVPNYEPFSFPDPSTRQLVGYDV 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 DFC A++ + + ++ R L ++DIL+ + +TL R + + Sbjct: 62 DFCEAIAGKLGVK---FEMKTMSNDARIPELTEGRVDILTADLGYTLTRAE--QINYSYG 116 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + + +G + + L+G I V G+T+E + + + + F+ Sbjct: 117 YFMVPHRVAVRADRGFADLKSLAGKRIAVIKGSTSEGFVRKSVE----NVNVVTFDDAPT 172 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + D ++ L + ++ + + +G+ V Sbjct: 173 GFLALVQGKVDGFSASFLVNARLISKAGDAAPLKLVDQAVGTETWGIGVRKGEDRLLGAV 232 Query: 242 SWTHYAMVTAEELG 255 + + E Sbjct: 233 DKALVDLDNSGEAE 246 >gi|300692873|ref|YP_003753868.1| amino-acid ABC transporter binding protein ybeJ [Ralstonia solanacearum PSI07] gi|299079933|emb|CBJ52610.1| Amino-acid ABC transporter binding protein ybeJ [Ralstonia solanacearum PSI07] Length = 299 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 95/252 (37%), Gaps = 7/252 (2%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + + + + L I+ G ++ V F+ +A G G+ +D C Sbjct: 10 LAVLAIPLAVSTVHAMASTPTLDRIRDTGTIRLAYREDSVPFSYSEA-GKPIGYSIDICS 68 Query: 66 ALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + + + K+QY+P+ A R + S + D+ +T + +AF Sbjct: 69 RVVESIRTSLKRPELKVQYVPVTAVNRMDTIASGKADLECGST--NNAPDRREKVAFTIP 126 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y ++ G+ L G ++ G++ + + M H + ++ Sbjct: 127 HYITKGRMLVKASSGLQQWDDLHGKTVVAARGSSASDVMHKLNDSTGMGMHTVDTNDLKT 186 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + DA+ GD L ++ T+D PSE+V+ S A + + D E+ +V Sbjct: 187 AFAMLSTGKADAFAGDDVLLAGMRATSDNPSEYVVAGKTQLVSSYAMMLSKQDAEFKKLV 246 Query: 242 SWTHYAMVTAEE 253 + ++ E Sbjct: 247 DQSMTRLIVDGE 258 >gi|293605337|ref|ZP_06687722.1| amino acid ABC superfamily ATP binding cassette transporter [Achromobacter piechaudii ATCC 43553] gi|292816276|gb|EFF75372.1| amino acid ABC superfamily ATP binding cassette transporter [Achromobacter piechaudii ATCC 43553] Length = 264 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 87/259 (33%), Gaps = 22/259 (8%) Query: 1 MYKDFFVSILCLIILFFTS---------FSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M K V ++ + A + + G++ Sbjct: 1 MKKLTAVFLVSATTMLTACGPSDDAKPTAGAQAPAMAK-----KVVVGLDDNFPPMGFRD 55 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 A+ GFDVD + S + + +++ P++ + L K++D+L T R+ Sbjct: 56 ASNQIVGFDVDMAKEASKRLGVE---VEFKPIDWSAKEAELNGKRVDVLWNGLTITEERK 112 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 ++F + Q I+ + + L+G ++ Q G++ +A A +K Sbjct: 113 K--NISFTAPYMANHQIIIVGTASPVKVKNDLAGKTVGAQDGSSATDAIAKDPVAAQIK- 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 F A R DA D + L + R E+ +L + + Sbjct: 170 EVKKFGDNVTALMDLAAGRLDAIVVDE--VVGRYLISKRTGEYRVLDENFGTEDYGVGVR 227 Query: 232 QGDTEWYNIVSWTHYAMVT 250 + DTE + T +M Sbjct: 228 KDDTELLGKLDKTLDSMKQ 246 >gi|262068036|ref|ZP_06027648.1| CjaA protein [Fusobacterium periodonticum ATCC 33693] gi|291378258|gb|EFE85776.1| CjaA protein [Fusobacterium periodonticum ATCC 33693] Length = 293 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 98/260 (37%), Gaps = 29/260 (11%) Query: 2 YKDFFVSILCLIILFFTSFS------------------TNASILGDIKKRGFLKCGINTG 43 K ++ + + + + A + +IK G ++ G+ T Sbjct: 5 KKILKLATVGVAVFILAACGNKTEEKTEAQAPAQEASVAKARTVQEIKDSGVIRIGVFTD 64 Query: 44 LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F + NG +G+DV F L+ + + ++Y+ L+ R ++ + DI++ N Sbjct: 65 KAPFGYIDENGKNQGYDVYFTDRLAKDLGVN---VEYISLDPASRVEYAETGKADIVAAN 121 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R + F G + I SV +L ++ V GTT E Sbjct: 122 FTVTPERAE--KVDFSLPYMKVSLGVVSPDGAVIKSVEELKDKTLIVSKGTTAEYY---- 175 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 F ++ + ++ + A R DA++ D + + A P V + + Sbjct: 176 FSKNHPEVKLQKYDSYADAYNALLDGRGDAFSTDNTEVLAWA--KSNPGFTVGIESLGDV 233 Query: 224 SPLAPAIIQGDTEWYNIVSW 243 +A A+ +G+T+ + ++ Sbjct: 234 DTIAVAVQKGNTDLLDWINN 253 >gi|330966438|gb|EGH66698.1| cystine transporter subunit [Pseudomonas syringae pv. actinidiae str. M302091] Length = 268 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 77/246 (31%), Gaps = 9/246 (3%) Query: 2 YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S + L++ + L IK G L G+ F+ V NG GF+ Sbjct: 7 RRTFLFSAMGLMLSAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + AL SK++D++ + R+ + Sbjct: 67 VEFSEALAKELGVKAKVQPSK---WDGILAALDSKRLDVVINQVTISDERKKKYDFSEPY 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + I S LSG + V GT E L KA+ +E Sbjct: 124 TISGIQALVLKKNADTIKSAKDLSGKKVGVGLGTNYEQWL----KANVPGAEIKTYEDDP 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA D A + E + S+ A+ +G+ E Sbjct: 180 TKIQDLSVGRIDAILVDRLAALEIAAKTKNTKRELAPAGEAFSRQESGIALRKGEPELLA 239 Query: 240 IVSWTH 245 + Sbjct: 240 AIDKAI 245 >gi|226306244|ref|YP_002766204.1| glutamate ABC transporter glutamate-binding protein [Rhodococcus erythropolis PR4] gi|226185361|dbj|BAH33465.1| glutamate ABC transporter glutamate-binding protein [Rhodococcus erythropolis PR4] Length = 278 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 88/267 (32%), Gaps = 14/267 (5%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKR---GFLKCGINTGLVGFAEVKANGD 55 M + I + I F + I + G L GI G + +G Sbjct: 1 MKINRSVRFGIGIMAIAFAATACGGGEENKSITESASDGTLTVGIKFDQPGLGQRNPDGT 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFDV+ R +++ + P I + + +R +Q+ ++D + T R+ Sbjct: 61 FSGFDVEVARYIANELGVKPEGITFKESPSAQRETLIQNGEVDYIVATYSITDTRKE--K 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHP 173 ++F + GQ ++ + G +C +G+T + D + Sbjct: 119 VSFGGPYFIAGQSLLVRSDNTDITGPDSLTGGKKLCSVSGSTPAQNIQDNYAK---DVQL 175 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + A R DA T D L P E ++ + + + + Sbjct: 176 QPLDTYSACVEALRNGAVDAVTTDDIILAGYAAQY--PGELKVVGEPFTTEKYGVGLAKD 233 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKN 260 D+E ++ M++ N Sbjct: 234 DSEGRGKINDAIEKMISTGAWEEAFNN 260 >gi|239620726|ref|ZP_04663757.1| glutamate-binding protein of ABC transporter system [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312132337|ref|YP_003999676.1| hisj1 [Bifidobacterium longum subsp. longum BBMN68] gi|239516302|gb|EEQ56169.1| glutamate-binding protein of ABC transporter system [Bifidobacterium longum subsp. infantis CCUG 52486] gi|311773858|gb|ADQ03346.1| HisJ1 [Bifidobacterium longum subsp. longum BBMN68] Length = 279 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 91/249 (36%), Gaps = 17/249 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + + + + + G ++ GI G +G + GFDVD Sbjct: 13 RVIAALAAVACTMSLAACGAD--------ETGKIRIGIKFDQPGLGFK-KSGTYVGFDVD 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + ++ + +I + +K+R +Q+ +D++ T R+ ++F Sbjct: 64 VAKYVAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKK--AVSFAGPY 121 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + GQ ++ K I+ L+G +C G+T+ T+ + F + + + E Sbjct: 122 FVAGQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFAS---EVQLMEQPGYAE 178 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + DA T D L L + ++ ++ I +GDT+ + Sbjct: 179 CATALFSGIVDAVTTDDIILAGLASASRGK--LKVVGKPFTQEYYGVGIKKGDTQLATKI 236 Query: 242 SWTHYAMVT 250 + M+ Sbjct: 237 NNAIVDMIQ 245 >gi|21228041|ref|NP_633963.1| glutamine-binding protein [Methanosarcina mazei Go1] gi|20906474|gb|AAM31635.1| Glutamine-binding protein [Methanosarcina mazei Go1] Length = 284 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 96/289 (33%), Gaps = 30/289 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-----------------GDIKKRG----FLKCG 39 M K + + ++F + ++ G G Sbjct: 4 MLKIMAMLFVIATVVFAAGCAEQGGEETVEEAAEESAPVEETASAEVNASGEEMPTYIVG 63 Query: 40 INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 F V + G GFDVD A++ K+QYL + ALQ+ IDI Sbjct: 64 TEAQFPPFEIVDSRGKVVGFDVDLLNAIAED---QGFKVQYLDQDFAGLIPALQTGNIDI 120 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTEL 158 ++ T RE + F G + + I SV+ L G ++ VQ G+T + Sbjct: 121 IASGMTITEERE--QEVDFSEPYITAGLALAVPINNEEIQSVADLQGKTVAVQTGSTGFM 178 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 A+ K + F V E + D D+ A +P I+ Sbjct: 179 K-AEELKEAGVIAEIKDFPHVNEAIEELKIGGADVMINDLPVTEAFIAA--QPDVIKIVG 235 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + ++ A+ G+TE ++ + + E N+ + ++ Sbjct: 236 EPLNSESYGFAVRTGNTELLQKINTGLENVKASGEYDELLTNLPKYMEE 284 >gi|116629192|ref|YP_814364.1| amino acid ABC transporter periplasmic protein [Lactobacillus gasseri ATCC 33323] gi|116094774|gb|ABJ59926.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus gasseri ATCC 33323] Length = 277 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 88/225 (39%), Gaps = 10/225 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +++I +K+ + G+ F + G +GF+VD +AL+ + +K +++ Sbjct: 32 SSNIYEQVKESKTITWGVKADTRLFGLMSIKTGKIEGFEVDLAKALTKQMLGKNAKTEFV 91 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 K R L++ ID + T R+ + F + GQ ++ I +V Sbjct: 92 QTTPKTRIPLLKNGNIDAILATMTITPDRKK--QVTFSEPYFTAGQSLLVKDNSTIKNVK 149 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + GTT + + + ++ + A +A + A T D L Sbjct: 150 DLNGKTALAVKGTTAVDNVKKFAPKAK----VLEYDDYGQAFTALKAGQGQAMTTDNGLL 205 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + N + ++ + P A+ +G T++ + ++ Sbjct: 206 AGIASENKG---YKLVGGTYTSEPYGIAVEKGQTDFADRINKALN 247 >gi|320457693|dbj|BAJ68314.1| glutamate ABC transporter substrate binding component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 266 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 94/246 (38%), Gaps = 15/246 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++ L + + + A + G ++ GI G +G + GFDVD + Sbjct: 1 MIAALAAVACTMSLAACGAD------ETGKIRIGIKFDQPGLGFK-KSGTYVGFDVDVAK 53 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + +I + +K+R +Q+ +D++ T R+ ++F + Sbjct: 54 YIAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKK--AVSFAGPYFVA 111 Query: 126 GQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 GQ ++ K I+ L+G +C G+T+ T+ + F + + + E Sbjct: 112 GQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFAS---EVQLMEQPGYAECAT 168 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + DA T D L L + ++ ++ I +GDT+ ++ Sbjct: 169 ALFSGIVDAVTTDDIILAGLASASRGK--LKVVGKPFTQEHYGVGIKKGDTQLATKINNA 226 Query: 245 HYAMVT 250 M+ Sbjct: 227 IVDMIQ 232 >gi|295426474|ref|ZP_06819124.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus amylolyticus DSM 11664] gi|295063842|gb|EFG54800.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus amylolyticus DSM 11664] Length = 271 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 110/284 (38%), Gaps = 21/284 (7%) Query: 1 MYK--DFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M K + +L +++F + T N + +K+ + GI F G Sbjct: 1 MKKLKKIILLMLGFMMVFALAGCTKKNDNTYEHVKQSKTIVWGIRADTRLFGLTNIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GF++D +AL+ + + ++L A R L++ +D + T R Sbjct: 61 IEGFEIDLAKALTKQMLGSSAHAEFLTTTANTRIPLLKNHNVDAVLATMTITKERAK--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + G ++ I++V QL+G ++ GTT + Y + Sbjct: 119 VDFTNPYFPAGSSLLVPNSSKITNVKQLNGKTVLAVKGTTAVDDVHKYAPKAK----VLQ 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + +A +A + A T D L + + P + ++ + + +P AI +G T Sbjct: 175 YDDYGQAMSALKAGQGVALTTDNGLLAGIAQ--ENPG-YKLVGGVYTNAPYGIAINKGQT 231 Query: 236 EWYNIVSWTHYAMVTAEELGITQKN--INQVSKDTTNPDVQRFL 277 + N ++ AE N IN+ K DV+ L Sbjct: 232 QMVNHLNTAL-----AELKKNGTYNRLINKWFKGIPGFDVKELL 270 >gi|326318880|ref|YP_004236552.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375716|gb|ADX47985.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 303 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 9/242 (3%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFD---- 73 A + I++ + G+ F+ V A G G+ VD C+A+ I + Sbjct: 24 AQAPADTMARIQQTRTITLGVRESAWPFSFVDAQNGGKAAGYSVDLCQAVVEDIKNTLKL 83 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++Y P++A ER L++ +ID+ +T T R+ + F P + G ++ K Sbjct: 84 KDLEVKYRPVSAAERIPKLEAGEIDLECGSTTNTKARQERVA--FGPTMFVAGIRVLVPK 141 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 +V L+G ++ V G+T+E L A+ +K VF+ +E A RA A Sbjct: 142 GTKADTVQDLAGMTVAVSKGSTSEKLLTQ-LTANEVKATVKVFDNNDEAFKALRAGTVKA 200 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D S L L N + ++S P A + + DT +V T + T+ E Sbjct: 201 FAQDDSLLLGLVARNKAQDALALSNFVLSVEPYAIMVRKSDTALMAVVDRTLGKLYTSRE 260 Query: 254 LG 255 + Sbjct: 261 ID 262 >gi|300313535|ref|YP_003777627.1| amino acid ABC transporter/signal transduction system periplasmic protein/domain-containing protein [Herbaspirillum seropedicae SmR1] gi|300076320|gb|ADJ65719.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Herbaspirillum seropedicae SmR1] Length = 260 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 88/245 (35%), Gaps = 10/245 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L + F++ A L DI+K G L+ + F V A+ +G D Sbjct: 1 MKLTKLLLGLMAGAMMFSASVARADALDDIQKHGTLRVAVPADFPPFGSVDADLKPQGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + ++ +P+++ R L +K++D++ + RE + F Sbjct: 61 IDVATLIAKKLGVK---VELIPVSSANRIPYLTTKKVDLVISSMGKNAEREKV--IDFSA 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G + S + L+G +I V G+ +L L A +E Sbjct: 116 AYAPFFNGVFGPADLSVKSAADLAGKTIAVTRGSVEDLELTKIVPA---SATVKRYEDNN 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +++ + + A+ P + +I SP + +G+ + + Sbjct: 173 STISSFLSGQVQLVATGNVVAAAIIAR--NPPKKPETKFLIKDSPCFIGLNKGEKKLQDK 230 Query: 241 VSWTH 245 V Sbjct: 231 VDAIL 235 >gi|315613066|ref|ZP_07887977.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] gi|315315176|gb|EFU63217.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] Length = 279 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 91/253 (35%), Gaps = 14/253 (5%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + +L L F T+ + AS +K+G + G + V + NG Sbjct: 1 MKRKKIALVLALFFSFFLTACTQKASDPNQDNWAKYQKQGSITIGFDNTFVPMGFEEKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D +A+S + +I++ P++ + LQ+ ID + T R+ Sbjct: 61 QYAGFDIDLAQAVSEKLG---IQIKFQPIDWDMKETELQNGTIDAIWNGYTATDERKE-- 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKY 171 +AF + Q + K + I S+ ++ + QAG++ L + K Sbjct: 116 KVAFTIPYMENQQVLVSKKSQNIHSIQDMTDKVLGAQAGSSGYLNFEGQPELLKNRVKDQ 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ E + R DA D + +++ + A + Sbjct: 176 KANQYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILNDYNVFSAGFESEAFAVGVR 235 Query: 232 QGDTEWYNIVSWT 244 D + ++ Sbjct: 236 PADKTLLDSLNQA 248 >gi|299783155|gb|ADJ41153.1| ABC transporter substrate binding component [Lactobacillus fermentum CECT 5716] Length = 284 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 114/291 (39%), Gaps = 30/291 (10%) Query: 1 MYK--DFFVSILCLI----ILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAE 49 M K V +L ++ ++ F S+ S + IKKRG+++ + L + Sbjct: 1 MKKIQKLIVGLLTVLSIFSLVSFAGLSSAKADSNQSSVSAIKKRGYIRIAVFGDLQPYGW 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V +G G+DV R ++ + ++++ +NA R L S + D++ N T Sbjct: 61 VNKDGKRVGYDVRLARQIAKDLGVK---VKFVQVNANNRVDTLNSNKADLVLANFTVTDE 117 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R + F G + K I+ VSQL SI + GTT E + Sbjct: 118 R--KQVIDFAKPYMKVSIGVVSLKSDPITKVSQLKNKSIIINKGTTAENYFVSNQSKLGI 175 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 K + F+ + A + R +A D S LYA P V + + ++PA Sbjct: 176 K-SILKFDTKTQQFNALKNKRANALADDNSYLYAW--VKKNPKYTVGIKTLGPSQDISPA 232 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280 + +G+ N + IT+ N + K N +++ + G + Sbjct: 233 VKKGNKSLLNWTNK-----------EITKLNKDGFFKTDFNKELKPYFGSE 272 >gi|189438884|ref|YP_001953965.1| amino acid ABC transporter periplasmic protein [Bifidobacterium longum DJO10A] gi|189427319|gb|ACD97467.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium longum DJO10A] gi|291516218|emb|CBK69834.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Bifidobacterium longum subsp. longum F8] Length = 279 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 91/249 (36%), Gaps = 17/249 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + + + + + G ++ GI G +G + GFDVD Sbjct: 13 RVIAALAAVACTMSLAACGAD--------ETGKIRIGIKFDQPGLGFK-KSGTYVGFDVD 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + ++ + +I + +K+R +Q+ +D++ T R+ ++F Sbjct: 64 VAKYVAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKK--AVSFAGPY 121 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + GQ ++ K I+ L+G +C G+T+ T+ + F + + + E Sbjct: 122 FVAGQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFAS---EVQLMEQPGYAE 178 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + DA T D L L + ++ ++ I +GDT+ + Sbjct: 179 CATALFSGIVDAVTTDDIILAGLASASRGK--LKVVGKPFTQEYYGVGIKKGDTQLATKI 236 Query: 242 SWTHYAMVT 250 + M+ Sbjct: 237 NNAIVDMIQ 245 >gi|298529733|ref|ZP_07017136.1| extracellular solute-binding protein family 3 [Desulfonatronospira thiodismutans ASO3-1] gi|298511169|gb|EFI35072.1| extracellular solute-binding protein family 3 [Desulfonatronospira thiodismutans ASO3-1] Length = 260 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 91/252 (36%), Gaps = 22/252 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+++ L L+ + ++ A R ++ G F + + G+ KGFD Sbjct: 1 MRRFFYITALVLLGCMLLAGTSLA--------RDKVRIGTEGAYPPFNYMDSQGNLKGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL A + +++ + AL ++ D + + T R+ + F Sbjct: 53 IDIAKALCEAA---NLECEFVTQSWDGIIPALLARDYDAIIASMSITEERKR--RVDFTE 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y F+ HK + I S L G S+ VQ T + + D F + + Sbjct: 108 KYYQTPARFVKHKDRDIEISKDDLEGLSVGVQRATVSANFINDNF---DDVLDIRSYATQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 EE + + R D D L L ++ + + + A+ QGD Sbjct: 165 EEANMDIVSGRVDLLFADAVVLQTGFLDSEEGQNYEFVGPSYTDEEWFGEGIGIALRQGD 224 Query: 235 TEWYNIVSWTHY 246 + + Sbjct: 225 DDLRETFNQAIQ 236 >gi|238793125|ref|ZP_04636753.1| Extracellular solute-binding protein, family 3 [Yersinia intermedia ATCC 29909] gi|238727498|gb|EEQ19024.1| Extracellular solute-binding protein, family 3 [Yersinia intermedia ATCC 29909] Length = 284 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 58/310 (18%), Positives = 100/310 (32%), Gaps = 65/310 (20%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK 77 S + +A L DIK+ G ++ + F + G+DVD A++ + Sbjct: 24 SGAAHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLGVK--- 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ N R L SK++D+++ N T R + F + GQ FI HK + Sbjct: 81 VELRATNPANRIPLLTSKKVDLIAANFTITDERAK--EVNFSLPYFATGQKFIAHKG-VL 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + I GT E+TL +++ I ++ A R A T D Sbjct: 138 KTPEDIGKLRIGADKGTVQEITLREHYPTAK----VISYDDTPLAFTALRNGNVQAITQD 193 Query: 198 ISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L L + I P I+K I +G+ V+ T Sbjct: 194 DAKLVGLLGNLPAAQKADFEISPFSITKEYQGVGIPKGEERLTASVNET----------- 242 Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 + ++K + ++DR G Sbjct: 243 --------------------LVKLEKDGEAAK---------------------IYDRWFG 261 Query: 316 NQSELKIPRG 325 + PRG Sbjct: 262 PATNAAQPRG 271 >gi|325517962|gb|EGC97786.1| polar amino acid transporter substrate-binding protein [Burkholderia sp. TJI49] Length = 264 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 82/251 (32%), Gaps = 17/251 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +L ++ + + A +L +K+RG L+ G+ F G+ Sbjct: 1 MKFSLLKKLLVAGLIGTSFAAATAHAADLLDQVKQRGTLRIGLEGTFPPFNSKNPQGELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + P ++ LQ+ + D++ T R+ L Sbjct: 61 GFDVDIAKAIAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDARK--QTLD 115 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F P + I K S+ L G + V GT Sbjct: 116 FSPAYTYSTAQLIQRKDDTRQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKT 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E A R DA D L L + P ++ S +P +G+ Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNP 228 Query: 236 EWYNIVSWTHY 246 ++ + Sbjct: 229 QFQKAIDDAMT 239 >gi|170744198|ref|YP_001772853.1| extracellular solute-binding protein [Methylobacterium sp. 4-46] gi|168198472|gb|ACA20419.1| extracellular solute-binding protein family 3 [Methylobacterium sp. 4-46] Length = 298 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 92/252 (36%), Gaps = 7/252 (2%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 VS ++ T S + L IK G + G + F+ + + GF +D C Sbjct: 10 VSCALVLSFATTVASAESPTLTKIKSNGSVTLGYREASIPFSYLGTDQKPVGFSLDLCAQ 69 Query: 67 LSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + + + D ++ P+++ R +Q+ ID+ T ++ R + F Sbjct: 70 VVAKIKSDLKLDTLAVKLQPVDSTNRIPLIQNGTIDMECGATSSSVARLKQVA--FTVAI 127 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + ++ GI V L G ++ V + + A KA ++ I + E Sbjct: 128 FVSSARWLTKVSSGIHDVKDLDGKTV-VATQGSNAVGFAFGIKAKGGTFNVIQAKDHGES 186 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 ++ R A+ D L +LK P+ LP+ + P + + D E + Sbjct: 187 MLTLQSGRAAAFMEDDILLASLKARTPDPAAFAFLPETYTLVPYGLMLPRDDVELKALAD 246 Query: 243 WTHYAMVTAEEL 254 M+ + Sbjct: 247 GVLKDMMASGAF 258 >gi|322689657|ref|YP_004209391.1| glutamate ABC transporter substrate-binding protein [Bifidobacterium longum subsp. infantis 157F] gi|320460993|dbj|BAJ71613.1| glutamate ABC transporter substrate binding component [Bifidobacterium longum subsp. infantis 157F] Length = 266 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 94/246 (38%), Gaps = 15/246 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++ L + + + A + G ++ GI G +G + GFDVD + Sbjct: 1 MIAALAAVACTMSLAACGAD------ETGKIRIGIKFDQPGLGFK-KSGTYVGFDVDVAK 53 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + +I + +K+R +Q+ +D++ T R+ ++F + Sbjct: 54 YIAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKK--AVSFAGPYFVA 111 Query: 126 GQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 GQ ++ K I+ L+G +C G+T+ T+ + F + + + E Sbjct: 112 GQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFAS---EVQLMEQPGYAECAT 168 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + DA T D L L + ++ ++ I +GDT+ ++ Sbjct: 169 ALFSGIVDAVTTDDIILAGLASASRGK--LKVVGKPFTQEYYGVGIKKGDTQLATKINNA 226 Query: 245 HYAMVT 250 M+ Sbjct: 227 IVDMIQ 232 >gi|209547540|ref|YP_002279458.1| family 3 extracellular solute-binding protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538784|gb|ACI58718.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 261 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 94/283 (33%), Gaps = 25/283 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + F +I L F S +++A L DI RG L+ + F V + G+D+D Sbjct: 4 RRVFFAIATLAATFGISSTSHADALADITARGTLRVAVPQDFPPFGSVGTDMAPMGYDID 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 ++ + + + + R LQ+ ++D++ + RE + F Sbjct: 64 VANLIAEKLGVKTELVP---VTSANRVPYLQTNKVDLVISSLGKNAEREKV--IDFSAAY 118 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G I+ L+G SI V G +L L A +E Sbjct: 119 APFFNGVFAPADLSIAKAEDLAGKSIAVTRGAVEDLELTKIAPA---DATIKRYEDNNGT 175 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +A+ + + D A+ P + L +I SP + + V+ Sbjct: 176 ISAFLSGQVDTVATGNVVAAAILA--KNPPKRPELKFLIKNSPCYIGLNKEQAALLEKVN 233 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285 A T L Q++LG D S++ Sbjct: 234 GIIAAAKTDGALNSIS---------------QKWLGTDLPSDL 261 >gi|148983989|ref|ZP_01817308.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP3-BS71] gi|147924136|gb|EDK75248.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP3-BS71] gi|301799655|emb|CBW32215.1| putative glutamine-binding protein precursor [Streptococcus pneumoniae OXC141] Length = 254 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 96/241 (39%), Gaps = 11/241 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLVAAKPVQANTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI Y+P+ A+ R L ++Q+D+ T R+ F Y D Sbjct: 61 ADEL---KVKIHYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K +K+ + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + +TE + + Sbjct: 176 AHRIDAFSVDRSILSGYTSKRT-----ELLDDSFKPSDYGIVTKKSNTELNDYLDNLVTK 230 Query: 248 M 248 Sbjct: 231 W 231 >gi|292558665|gb|ADE31666.1| Major cell-binding factor precursor (CBF1) [Streptococcus suis GZ1] Length = 279 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 55/268 (20%), Positives = 105/268 (39%), Gaps = 28/268 (10%) Query: 1 MYKD-------FFVSILCLIILFFT----------SFSTNASILGDIKKRGFLKCGINTG 43 M K + + LI+L F + TN+ + I RG L+ G+ Sbjct: 1 MDKKKINIFFAIRLLVFGLILLVFAKQPVAQTETPASITNSDQVQAIIDRGVLRVGVKQD 60 Query: 44 LVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 + F + G+++G ++D R ++ + D I++ P+ A+ R L + Q+D++ Sbjct: 61 VPNFGYKNPDTGEFEGMEIDIARKIADELGVD---IEFTPVTAQTRGPLLDNSQVDMVIA 117 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 T R+ L F Y D GF+++K GI + + L G +I V G+ T +++ Sbjct: 118 TFTITEERK--LLYNFTTPYYTDAVGFLVNKDSGIKTFTDLDGKTIGVAQGSITRTLISE 175 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 + + + E+ + RAHR D ++ D S L + + S Sbjct: 176 LADKYGITVNFAELGSYPELSVSLRAHRTDTFSVDQSILAGYISSKSELMDF-----SFS 230 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 S + + N ++ Sbjct: 231 ASDYGIVTKLSNKDLNNYLNSLVEKWTA 258 >gi|184155299|ref|YP_001843639.1| ABC transporter substrate binding component [Lactobacillus fermentum IFO 3956] gi|227514602|ref|ZP_03944651.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus fermentum ATCC 14931] gi|260662187|ref|ZP_05863083.1| ABC transporter substrate binding component [Lactobacillus fermentum 28-3-CHN] gi|183226643|dbj|BAG27159.1| ABC transporter substrate binding component [Lactobacillus fermentum IFO 3956] gi|227087013|gb|EEI22325.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus fermentum ATCC 14931] gi|260553570|gb|EEX26462.1| ABC transporter substrate binding component [Lactobacillus fermentum 28-3-CHN] Length = 284 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 114/291 (39%), Gaps = 30/291 (10%) Query: 1 MYK--DFFVSILCLI----ILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAE 49 M K V +L ++ ++ F S+ S + IKKRG+++ + L + Sbjct: 1 MKKIQKLIVGLLTVLSIFSLVSFAGLSSAKADSNQSSVSAIKKRGYIRIAVFGDLQPYGW 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V +G G+DV R ++ + ++++ +NA R L S + D++ N T Sbjct: 61 VNKDGKRVGYDVRLARQIAKDLGVK---VKFVQVNANNRVDTLNSNKADLVLANFTVTDE 117 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R + F G + K I+ VSQL SI + GTT E + Sbjct: 118 R--KQVVDFAKPYMKVSIGVVSLKSDPITKVSQLKNKSIIINKGTTAENYFVSNQSKLGI 175 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 K + F+ + A + R +A D S LYA P V + + ++PA Sbjct: 176 K-SILKFDTKTQQFNALKNKRANALADDNSYLYAW--VKKNPKYTVGIKTLGPSQDISPA 232 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280 + +G+ N + IT+ N + K N +++ + G + Sbjct: 233 VKKGNKSLLNWTNK-----------EITKLNKDGFFKTDFNKELKPYFGSE 272 >gi|167628320|ref|YP_001678819.1| amino acid abc transporter, amino acid-binding protein, putative [Heliobacterium modesticaldum Ice1] gi|167591060|gb|ABZ82808.1| amino acid abc transporter, amino acid-binding protein, putative [Heliobacterium modesticaldum Ice1] Length = 273 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 82/249 (32%), Gaps = 12/249 (4%) Query: 1 MYKDFFV----SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K + ++ +++ NA + + G F G+ Sbjct: 13 MNKWMRIGCTAALAAGLLVSLAGCGGNAPA-TTATAKKKIVVGTEATYRPFEWKDEQGEI 71 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD R + I + ++ LQ++ ID+++ T R+ S+G Sbjct: 72 IGFDVDLAREIGKEIGVE---VEIKNTPFDNLIAELQNQSIDMIASAMTITEKRKESIG- 127 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y Q I+ + I +++ L ++ VQ GTT F Sbjct: 128 -FSKPYYDSVQAIIVKEGSPIKTLADLKDKNVGVQNGTTGMGVAEKLLGER--STRIKRF 184 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E + + R DA D + N ++ + K A+ +GD E Sbjct: 185 ETLPDALNTLRIDGLDAVIADKPVAQNYLVNNPDAKLLILEDTSLEKEQFGFAVRKGDRE 244 Query: 237 WYNIVSWTH 245 ++ Sbjct: 245 LQQQINDAL 253 >gi|172060526|ref|YP_001808178.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171993043|gb|ACB63962.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 264 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 87/257 (33%), Gaps = 18/257 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +L ++ + + A +L +K+RG L+ G+ F G+ Sbjct: 1 MKISLLKKLLVAGLIGTSFAAATAHAADLLDQVKQRGTLRVGLEGTFPPFNSKNPQGELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + ++ LQ+ + D+++ T R+ + L Sbjct: 61 GFDVDIAKAVAAKLGVKAE---FVTTEWSGIIAGLQAGKFDVIANQVGITDKRKET--LD 115 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F P + I K S+ L G + V GT Sbjct: 116 FSPAYTYSSAQLIQRKDDTRQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKT 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E A R DA D L L + P ++ S +P +G+ Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFRKGNP 228 Query: 236 EWYNIVSWTHYAMVTAE 252 ++ + A + A+ Sbjct: 229 KFQKAIDDAM-AQLEAD 244 >gi|302023815|ref|ZP_07249026.1| extracellular amino acid-binding protein [Streptococcus suis 05HAS68] gi|330832845|ref|YP_004401670.1| amino acid ABC transporter periplasmic protein [Streptococcus suis ST3] gi|329307068|gb|AEB81484.1| amino acid ABC transporter periplasmic protein [Streptococcus suis ST3] Length = 266 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 91/262 (34%), Gaps = 16/262 (6%) Query: 1 MYKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55 M K ++ L L + S+ + S L IK++G L + F V + Sbjct: 1 MKKILALAATVLAGLTLAACSSTSSQSALDKIKEKGTLVVATSPDYAPFEFQALVDGKNE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G D+ + ++ + ++ ++ ++Q+ + DI ++ R Sbjct: 61 VVGADIMLAQKIADELGVK---LEVSAMSFDNVLSSVQNGKADIAIAGLSYSEERAKV-- 115 Query: 116 LAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F Y ++ K ++S+ +SG ++ VQ G+T E + N Sbjct: 116 FDFSESYYQISDVLLIKKDSANSLTSIDAMSGKTLAVQKGSTQESYAQENISQAN----L 171 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + E ++ + DA D N + + I ++ A+ +G Sbjct: 172 ISLTLMGEAVNELKSGKVDAILMDSPVAAGYVSQNSDLAVASVEFPTIDENSKVIALPKG 231 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 TE + + ++E Sbjct: 232 STELKTAIDKVIAEVKASDEFD 253 >gi|322411893|gb|EFY02801.1| amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 277 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 40/268 (14%), Positives = 88/268 (32%), Gaps = 14/268 (5%) Query: 1 MYKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + + L I L + + + +K + G + V +G Sbjct: 1 MRRSIRIVFLAAISLLLVACGTANKTAKSGDAWKTYQKEKNITLGFDNTFVPMGYKDESG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 D KGFD+D +A+ + + +N + L++ +ID++ T R+ Sbjct: 61 DNKGFDIDLAKAVFKQYG---ITVNFQAINWDLKEAELKNSKIDMIWNGYSMTQERQA-- 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KY 171 +AF + Q ++ K GI+ S + + Q+G++ L + K Sbjct: 116 KVAFTVPYMKNEQVIVVKKSSGITDTSDMKNKVLGAQSGSSGYDALTRHHKVLKDLIKDQ 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 +E + + +R D D ++ ++ ++ A + Sbjct: 176 DATQYETFTQAFIDLKTNRIDGLLIDKVYANYYLKQENQLDDYQLVSTGFDNEQFAVGLR 235 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQK 259 + D ++ M E + Sbjct: 236 KEDKTLQKKINEALKKMYQDGEFQAISQ 263 >gi|194288892|ref|YP_002004799.1| glutamate/aspartate ABC transporterperiplasmic binding component [Cupriavidus taiwanensis LMG 19424] gi|193222727|emb|CAQ68730.1| glutamate/aspartate ABC transporter,periplasmic binding component [Cupriavidus taiwanensis LMG 19424] Length = 303 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 78/233 (33%), Gaps = 7/233 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-- 74 + + L IK G + G + F+ + G+ + + + + Sbjct: 25 GAVHAADGDTLKKIKDSGVISLGYRESSIPFSYTDGK-EVMGYSHEILLQIVDKVKSELK 83 Query: 75 --PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +++ P+ ++ R +Q+ IDI +T L R+ + F + G + Sbjct: 84 MPNLQVRLTPITSQNRIPLVQNGTIDIECGSTTNNLERQKQVA--FSNSLFVYGIKMLTK 141 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K G+ + L ++ AGTT E L M + I + + R Sbjct: 142 KDSGVKEFADLKDRNVVTTAGTTGERLLVKMNGEKAMNMNLISTKDHGQSFLILETGRAA 201 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A+ D LY + ++ V++ + A + D + + Sbjct: 202 AFVMDEPLLYGERTKAKNAADWVVVGAPLQTENYACMFRKDDPSFKKLADGVI 254 >gi|293365297|ref|ZP_06612014.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|307703837|ref|ZP_07640778.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] gi|291316747|gb|EFE57183.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|307622672|gb|EFO01668.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] Length = 279 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 91/253 (35%), Gaps = 14/253 (5%) Query: 1 MYKDFFVSILCLIILFFT-SFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + +L L FF + + AS +K+G + G + V + NG Sbjct: 1 MKRKKIALVLALFFSFFLIACTQKASDPSQDNWAKYQKQGSITIGFDNTFVPMGFEEKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D +A+S + +I++ P++ + LQ+ ID + T R+ Sbjct: 61 QYAGFDIDLAQAVSEKLG---IQIKFQPIDWDMKETELQNGTIDAIWNGYTATNERKE-- 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKY 171 +AF + Q + K + I S+ ++ + QAG++ L + K Sbjct: 116 KVAFTIPYMENQQVLVSKKSQNIHSIQDMADKVLGAQAGSSGYLNFEGQPELLKNRVKDQ 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ E + R DA D + +++ + A + Sbjct: 176 KANQYQSFNEALIDLKNDRIDALVIDRVYANYYLQSEGILNDYNVFSAGFESEAFAVGVR 235 Query: 232 QGDTEWYNIVSWT 244 D + ++ Sbjct: 236 PADKTLLDALNQA 248 >gi|313673708|ref|YP_004051819.1| amino acid abc transporter substrate-binding protein, paat family [Calditerrivibrio nitroreducens DSM 19672] gi|312940464|gb|ADR19656.1| amino acid ABC transporter substrate-binding protein, PAAT family [Calditerrivibrio nitroreducens DSM 19672] Length = 264 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 97/251 (38%), Gaps = 14/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F I+ ++ S L I KRG +K G++T V +A +G+W GF+ Sbjct: 1 MKRIFLALIMIFMLFATGFAEDKKSTLDSIIKRGKMKVGMST-FVPWAMQTKSGEWIGFE 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + L+ + I+++P +L + DI+ T R +L + F Sbjct: 60 IDVAKRLAKDMG---VGIEFVPTKWSGIIPSLLTGNYDIIIGGMGITPER--ALKVEFSI 114 Query: 121 ITYFDGQGFI-MHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFE 177 + G + K +S+ +L+ + + A TT T +F +F+ Sbjct: 115 PYDYSGMAIVANRSKTKANSLKELNNPDVTIVARLGTTAAETAKKFFPRA----QLKLFD 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + R A+ L + + + + +K P+ A+ +GD E+ Sbjct: 171 DEPQAIQELLNGRATAFISSAPLPAFLAIDHS-SKLYQPVKGTFTKEPIGFAVRKGDQEF 229 Query: 238 YNIVSWTHYAM 248 N ++ + Sbjct: 230 LNYLNSWITVV 240 >gi|296274226|ref|YP_003656857.1| family 3 extracellular solute-binding protein [Arcobacter nitrofigilis DSM 7299] gi|296098400|gb|ADG94350.1| extracellular solute-binding protein family 3 [Arcobacter nitrofigilis DSM 7299] Length = 271 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 96/251 (38%), Gaps = 16/251 (6%) Query: 1 MYKDFFVSILCLIILFFTS--FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++ + S S L + +RG L+ + G + F G G Sbjct: 1 MKKMLLAILVFATVNLVASDINLWKNSTLNKVLERGELQVCLEPGYMPFEMKDKKGRIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +DVD + ++ + ++ LP AL + + DI+ T R +L + F Sbjct: 61 YDVDVAQLMAKEMGVK---LKLLPTAWDGIIAALVTGKCDIIISGMTVTQQR--NLKVNF 115 Query: 119 RPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPI 174 GQ +M+K + I S +L + T+ E+ + ++K + Sbjct: 116 ADPYLVVGQTVLMNKSLEGKIKSAKELDNPKYTIVTKLGTSAEIAIRKFYKKAK----IV 171 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 FE + + + DA+ D L + + + V L ++ PLA AI +GD Sbjct: 172 TFETEADAVSEVLNNNADAFVYDQP-YNILFMADKGKGKLVHLDTPLTFEPLAWAIRKGD 230 Query: 235 TEWYNIVSWTH 245 ++ N ++ Sbjct: 231 PDFLNWLNNFL 241 >gi|86360893|ref|YP_472780.1| amino acid ABC transporter substrate-binding protein [Rhizobium etli CFN 42] gi|86284995|gb|ABC94053.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 261 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 51/283 (18%), Positives = 95/283 (33%), Gaps = 25/283 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + F +I L F + ++A L DI RG L+ + F V + G+D+D Sbjct: 4 RRIFFAIATLAATFGFNAPSHADALADITARGTLRVAVPQDFPPFGSVGTDMAPMGYDID 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 ++ + + + + R LQ+ ++D++ + RE + F Sbjct: 64 MANLIAEKLGVKAELVP---VTSANRVPYLQTNKVDLVISSLGKNPEREKV--IDFSVAY 118 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G ++ L+G SI V G +L L A +E Sbjct: 119 APFFNGVFGPADLSVAKAEDLAGKSIGVTRGAVEDLELTKIAPA---DATIKRYEDNNGT 175 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +A+ + + D A+ P + L +I SP + + + V+ Sbjct: 176 ISAFLSGQVDIIATGNVVAAAILA--KNPPKRPELKFLIKNSPCYIGLNKEQSALLEKVN 233 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285 A + T N Q++LG D S++ Sbjct: 234 GIVAA---------------AKADGTLNAISQKWLGADLPSDL 261 >gi|330941851|gb|EGH44588.1| extracellular solute-binding protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 283 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 98/252 (38%), Gaps = 4/252 (1%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + +L T + S L + KRG L G + + A+G +GFD+D Sbjct: 9 KACAFVLSASFMLANTVQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDID 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R ++ +F+DPSK++++ ++ R L + ++DI + T R + +AF Sbjct: 69 IGRIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPY 126 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y +G ++ + L A V + + K ++ V+ + Sbjct: 127 YREGVALLLPVNSKYKEIDDLKAAGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + R D D S+ L P + S A A+ +GD +W N V+ Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVN 244 Query: 243 WTHYAMVTAEEL 254 + +T E Sbjct: 245 TALHEAMTGVEF 256 >gi|331003781|ref|ZP_08327275.1| hypothetical protein HMPREF0491_02137 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412164|gb|EGG91559.1| hypothetical protein HMPREF0491_02137 [Lachnospiraceae oral taxon 107 str. F0167] Length = 281 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 84/266 (31%), Gaps = 25/266 (9%) Query: 1 MYKDFFVSILCLIILFFTSFS--TNASILGDIKK----------------RGFLKCGINT 42 M K + + IL +L S + +S K + G + Sbjct: 1 MKKMYLLGILAAFVLAGCSSAKPAESSSADTSKAETTVAGETTTAAVTDSKNTFTVGFDQ 60 Query: 43 GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 V +G++ GFD++ ++ + + I+Y P+ + + L S ID + Sbjct: 61 DFPPMGFVGDDGEFTGFDLELAAEVAKRLGKE---IKYQPIAWDAKDMELSSGTIDCIWN 117 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 + + + Q F++ I S+ L+G ++ VQA ++ E L + Sbjct: 118 GFSIQGREDK---YTWSKPYMNNEQVFVVKSDSSIESIEDLAGKTVEVQADSSAEAALKE 174 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 + + DA D S + ++T +L +S Sbjct: 175 NTELASTFGKLQTVADYNTGFMDLDMGGVDAIAMD-SVVANYQITKRGGEGFTVLDTPLS 233 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAM 248 G+ + V M Sbjct: 234 TEEYGIGFKLGNEALRDEVQKALDEM 259 >gi|158313076|ref|YP_001505584.1| extracellular solute-binding protein [Frankia sp. EAN1pec] gi|158108481|gb|ABW10678.1| extracellular solute-binding protein family 3 [Frankia sp. EAN1pec] Length = 323 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 89/227 (39%), Gaps = 9/227 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S + ++ G + G F G+ +GFDV+ R ++ A+ K++++ Sbjct: 73 AGSTMAKLQSAGTITVGTKFDQPLFGLKNLRGEPEGFDVEIARIITDALGIPADKVKFVE 132 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + R ++ ++D++ R + F Y GQ ++ + + Sbjct: 133 TVSANREPFIEQHRVDLVVATYTINDKR--KQVVDFAGPYYVAGQTLMVRAGETAITGKD 190 Query: 143 -LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G +C +G+T A+ + +F+ + A +A + DA T D + L Sbjct: 191 TLAGKKVCSVSGSTP----AERIRTQAPDAELTLFDVYSKCAEALKAGQVDAVTTDNAIL 246 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 L + P ++ + S P I +GD E+ ++ T A Sbjct: 247 LGL--MDSDPGAFKLVGEPFSTEPYGIGIAKGDDEFRTFINDTLEAA 291 >gi|309780305|ref|ZP_07675056.1| glutamate/aspartate transporter [Ralstonia sp. 5_7_47FAA] gi|308921008|gb|EFP66654.1| glutamate/aspartate transporter [Ralstonia sp. 5_7_47FAA] Length = 302 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 90/245 (36%), Gaps = 8/245 (3%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA----LS 68 F ++ L I+ G + + F+ + + G+ +D C + Sbjct: 21 TAFFPSNAVAATPTLDRIRDSGTVHVAYREDSIPFSYLDGS-KPVGYAIDICSRLIDSIK 79 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +++ K+QY+P+ A R + S + D+ +T RE +AF Y Sbjct: 80 TSLKRPDLKVQYVPVTAATRMDVVASGKADLECGST--NNSRERREKVAFTIPHYITKGR 137 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ I L+G ++ V A +T LA M + + A Sbjct: 138 MLVKTGSPIQQWEDLNGKTV-VAARGSTNADLARKLNETGMTVQVVDANDLRSAFAMLAD 196 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R +A+ GD L ++ T P+++ + S A + + D E+ ++ + + Sbjct: 197 GRANAFAGDDILLSGMRATAKNPADYRLAGKTQLVSSYAIMLSKQDPEFKKLIDQSMTRL 256 Query: 249 VTAEE 253 + E Sbjct: 257 IVDGE 261 >gi|191638265|ref|YP_001987431.1| Glutamine ABC transporter, substrate binding protein [Lactobacillus casei BL23] gi|239631650|ref|ZP_04674681.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066314|ref|YP_003788337.1| amino acid ABC transporter/signal transduction system periplasmic protein [Lactobacillus casei str. Zhang] gi|190712567|emb|CAQ66573.1| Glutamine ABC transporter, substrate binding protein [Lactobacillus casei BL23] gi|239526115|gb|EEQ65116.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438721|gb|ADK18487.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus casei str. Zhang] gi|327382298|gb|AEA53774.1| Extracellular solute-binding protein family 3 [Lactobacillus casei LC2W] gi|327385493|gb|AEA56967.1| Extracellular solute-binding protein family 3 [Lactobacillus casei BD-II] Length = 270 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 93/256 (36%), Gaps = 13/256 (5%) Query: 1 MYKDFFVSILCL-----IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M + ++++ L ++ + T + I++ + G++ V + NG Sbjct: 1 MKRRIVLALMLLVTLLGTVISGCARETVGNSWPRIERTKKVVIGLDDTFVPMGFRQKNGQ 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+D+D +A+ + + + ++ + L+++ ID++ T R+ Sbjct: 61 LAGYDIDLAKAVFKRYGIN---VDFQTIDWSMKETELKNQTIDLIWNGYSVTPERKE--K 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172 +AF + Q + K I ++ ++G ++ VQ G++ L K Sbjct: 116 VAFSDNYLINHQILVTKTKSNIKTIKDMAGKTLGVQTGSSGAFDLDAQPKLLKNFIANKT 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ + A R D PS + I D A + + Sbjct: 176 PILYDTFNDAFIDLDAGRIQGILMDEVYARYYIAHKPDPSSYRIASDDFPPENFAVGMRK 235 Query: 233 GDTEWYNIVSWTHYAM 248 D + ++ A+ Sbjct: 236 SDNVLRSKINAGLKAL 251 >gi|306825320|ref|ZP_07458662.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432756|gb|EFM35730.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 279 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 90/253 (35%), Gaps = 14/253 (5%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K +++ F T+ + AS +K+G + G + V + NG Sbjct: 1 MKRKKIALALALFFSFFLTACTQKASDPNQDNWAKYQKQGSITIGFDNTFVPMGFEEKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D +A+S + +I++ P++ + LQ+ ID + T R+ Sbjct: 61 QYAGFDIDLAQAVSEKLG---IQIKFQPIDWDMKETELQNGTIDAIWNGYTATDERKE-- 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKY 171 +AF + Q + K + I S+ ++ + QAG++ L + K Sbjct: 116 KVAFTIPYMENQQVLVSKKSQNIHSIQDMTDKILGAQAGSSGYLNFEGQPELLKNRVKDQ 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ E + R DA D + S++ + A + Sbjct: 176 KANQYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILSDYNVFSAGFESEAFAVGVR 235 Query: 232 QGDTEWYNIVSWT 244 D ++ Sbjct: 236 PADKTLLAALNQA 248 >gi|34498540|ref|NP_902755.1| arginine/ornithine ABC transporter substrate-binding protein [Chromobacterium violaceum ATCC 12472] gi|34104396|gb|AAQ60754.1| arginine/ornithine transport system substrate-binding protein (ABC superfamily) [Chromobacterium violaceum ATCC 12472] Length = 254 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 84/248 (33%), Gaps = 25/248 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S + S S A L+ G++ F++ A+G +GFD Sbjct: 1 MKKALIAS---AGLALLASLSAQAET---------LRVGVDLNYPPFSKQGADGKPQGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL +A+ Q +P + AL + + D++ + T R+ + F Sbjct: 49 IDIANALCAAM---KVTCQIVPQDWDGLIPALNANKFDVIISSMQITPERQK--AVDFSH 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + K + L G I V +T E DY+ + + + + Sbjct: 104 KYYNIASRMV-AKDGTKVDAASLKGKKIGVLRASTQEKFAKDYWGKNG--ATVVPYAKSP 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 E ++ R DA D + L + + + S A+ +G+ Sbjct: 161 ESFLDLKSGRVDAVFVDSAVGEQEFLKTTQAKGYSFVGPNYSDVKYFGPGCGIAVKKGNK 220 Query: 236 EWYNIVSW 243 ++ Sbjct: 221 ALVERLNK 228 >gi|194466983|ref|ZP_03072970.1| extracellular solute-binding protein family 3 [Lactobacillus reuteri 100-23] gi|194454019|gb|EDX42916.1| extracellular solute-binding protein family 3 [Lactobacillus reuteri 100-23] Length = 276 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 99/255 (38%), Gaps = 19/255 (7%) Query: 1 MYKDF----FVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVK-A 52 M K + ++L + +L ++ +L + + + G+ F Sbjct: 1 MKKYWRLISLSALLFITLLTLSACGTSIAKKDVLTEDMRSQRITWGVKADTRLFGLENIR 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G +GF++D A++ I K ++P+ + R L++ ID + T RE Sbjct: 61 TGKLEGFEIDLATAITKKILGPQGKPIFVPVTSGTRVPLLKNGNIDAIMATMTITPEREK 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMK 170 + F + GQ ++ K I +++ L+ GA I +G+ + +A + Sbjct: 121 --QVDFTHSYFDAGQSLLVRKGSPIKNINDLNRRGAVILGVSGSNSVKNVARFAPKA--- 175 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + A ++ + DA T D LY + + P + ++ +K P A+ Sbjct: 176 -RVLQLSDYAQAMTALKSKQGDALTTDNGILYGMAA--ENPG-YEVVGGNFTKEPYGIAV 231 Query: 231 IQGDTEWYNIVSWTH 245 + + N ++W Sbjct: 232 NKNQARFRNKLNWAL 246 >gi|146318671|ref|YP_001198383.1| amino acid ABC transporter periplasmic protein [Streptococcus suis 05ZYH33] gi|146320878|ref|YP_001200589.1| amino acid ABC transporter periplasmic protein [Streptococcus suis 98HAH33] gi|253751787|ref|YP_003024928.1| putative extracellular amino acid-binding protein [Streptococcus suis SC84] gi|253753610|ref|YP_003026751.1| extracellular amino acid-binding protein [Streptococcus suis P1/7] gi|253755509|ref|YP_003028649.1| extracellular amino acid-binding protein [Streptococcus suis BM407] gi|145689477|gb|ABP89983.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus suis 05ZYH33] gi|145691684|gb|ABP92189.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus suis 98HAH33] gi|251816076|emb|CAZ51696.1| putative extracellular amino acid-binding protein [Streptococcus suis SC84] gi|251817973|emb|CAZ55754.1| putative extracellular amino acid-binding protein [Streptococcus suis BM407] gi|251819856|emb|CAR45858.1| putative extracellular amino acid-binding protein [Streptococcus suis P1/7] gi|292558355|gb|ADE31356.1| extracellular solute-binding protein, family 3 [Streptococcus suis GZ1] gi|319758136|gb|ADV70078.1| amino acid ABC transporter periplasmic protein [Streptococcus suis JS14] Length = 266 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 90/262 (34%), Gaps = 16/262 (6%) Query: 1 MYKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55 M K ++ L L + S+ + S L IK++G L + F V + Sbjct: 1 MKKILALAATVLAGLTLAACSSTSSQSALDKIKEKGTLVVATSPDYAPFEFQALVDGKNE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G D+ + ++ + ++ ++ ++Q+ + DI ++ R Sbjct: 61 VVGADIMLAQKIADELGVK---LEVSAMSFDNVLSSVQNGKADIAIAGLSYSEERAKV-- 115 Query: 116 LAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F Y ++ K ++S+ +SG ++ VQ G+T E + N Sbjct: 116 FDFSESYYQISDVLLIKKDSANSLTSIDAMSGKTLAVQKGSTQESYAQENISQAN----L 171 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + E ++ + DA D N + + I ++ A+ +G Sbjct: 172 ISLTLMGEAVNELKSGKVDAILMDSPVAAGYVSQNSDLAVASVEFPTIDENSKVIALPKG 231 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 TE + + + E Sbjct: 232 STELKTAIDKVIAEVKASGEFD 253 >gi|116495484|ref|YP_807218.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei ATCC 334] gi|116105634|gb|ABJ70776.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus casei ATCC 334] Length = 274 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 80/226 (35%), Gaps = 9/226 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + IL K + G+ F + G +GFDVD +A++ I K Q Sbjct: 29 ADRDILTTAKTTNTIVWGVKADTRLFGLMDIKTGKIEGFDVDMAKAITKQILGSKGKAQL 88 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + + R ++ +D + T R+ L F + + GQ ++ K I SV Sbjct: 89 VQVTSDTRVPMIKGGSVDAVIATMTITPERQKI--LDFSDVYFNAGQSILVKKGSPIKSV 146 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L + + + D K + + A ++ + DA T D Sbjct: 147 KDLKKGTKVIGVQGS---NSVDNVKKAAPDTTVLQLSDYAQAFTALKSGQGDALTTDNGI 203 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 LY + + +++ +K P AI +G + V+ Sbjct: 204 LYGMSEQDPN---YIVTGGTFTKEPYGIAINKGQKPFVQAVNKAIK 246 >gi|50122416|ref|YP_051583.1| putative amino acid ABC transporter substrate binding protein [Pectobacterium atrosepticum SCRI1043] gi|49612942|emb|CAG76393.1| putative amino acid ABC transporter, substrate binding protein [Pectobacterium atrosepticum SCRI1043] Length = 268 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 98/265 (36%), Gaps = 17/265 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K ++++ +L + S A L DI+KRG L+ + F V + +G+D+ Sbjct: 8 IKKGLLAVMGAAMLLVQAGSVMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 67 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D R L+ + +Q +P+ + R LQ+ ++D++ + RE + F Sbjct: 68 DIARYLAKEM---KLTLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREKV--IDFSRA 122 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G K ++S L G SI V G ++ L + +E Sbjct: 123 YAPFFLGVFGPKDSALASSEALEGKSIGVTRGAVEDMVLTETAPKA---AQIKRYEDNNT 179 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +AY + + + + A+ P++ + ++ SP + + + V Sbjct: 180 TLSAYLSGQVEFVATGNLVVAAIAEQ--NPTKAPVAKFMLKDSPCYIGMKKDEPALKAKV 237 Query: 242 SWTHYAMVTAEELGITQKNINQVSK 266 E + +N +S+ Sbjct: 238 DALI-------EQALKDDTLNSLSE 255 >gi|300725186|ref|YP_003714514.1| putative amino acid ABC transporter ATP-binding protein [Xenorhabdus nematophila ATCC 19061] gi|297631731|emb|CBJ92450.1| putative amino acid-binding protein (ABC superfamily, peri_bind) [Xenorhabdus nematophila ATCC 19061] Length = 282 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 93/246 (37%), Gaps = 13/246 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61 K L L S A L DIKK G ++ + F + G+DV Sbjct: 6 KSRIAITALLTSLALVSGVAKADKLDDIKKAGTVRIAVFDSNPPFGFIDPRTKKLAGYDV 65 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + A++S + ++ P N R L SK+ID+++ N T R + F Sbjct: 66 EIANAIASDLGVK---LELRPTNPANRIPLLSSKKIDLIAANFTVTDERAK--QVDFSIP 120 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + GQ FI K +++ ++ I GT E+TL + + I ++ Sbjct: 121 YFATGQKFIARKG-VLTNPDDIAKLRIGADKGTVQEITLRERYPTAK----VISYDDTPL 175 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYN 239 AA R A T D + L L + I P I++ A A+ +G+ + Sbjct: 176 AFAALRNGNVQAITQDDAKLVGLLANVPEAQKADFEISPFSITREYQAVAVTKGEGRLID 235 Query: 240 IVSWTH 245 V+ T Sbjct: 236 AVNQTL 241 >gi|332076443|gb|EGI86906.1| major cell-binding factor [Streptococcus pneumoniae GA41301] Length = 254 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 11/241 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ F Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K +K+ + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + +TE + + Sbjct: 176 AHRIDAFSVDRSILSGYTNKRT-----ALLDDSFKPSDYGIVTKKSNTELNDYLDNLVTK 230 Query: 248 M 248 Sbjct: 231 W 231 >gi|269219728|ref|ZP_06163582.1| CjaA protein [Actinomyces sp. oral taxon 848 str. F0332] gi|269210970|gb|EEZ77310.1| CjaA protein [Actinomyces sp. oral taxon 848 str. F0332] Length = 400 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 89/234 (38%), Gaps = 10/234 (4%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 + A IK G ++ G+ F ++G G+DV++ + ++ + Sbjct: 98 GAGGSSVKPVGARTPEQIKAAGTVRIGVFGDKAPFGYTDSDGTNVGYDVEYAKRIAKDLG 157 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 + + A R L S ++D++ N T R + F G + Sbjct: 158 VKLELVPVV---ADSRVEYLTSGKVDVILANFTVTPERAE--KVDFAKPYMKVSLGAVSR 212 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K I+S SQLSG I V GTT + + A + + P +++ ++ A R D Sbjct: 213 KDAPITSESQLSGKKILVVKGTTADSYIQ----AKHPDWKPAKYDQYSDVYNALADGRGD 268 Query: 193 AYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + D + AL + ++ + + +A A+ +G+ N ++ Sbjct: 269 VWVTDNTEALAFSRQGENKDKFVTGITQLGPVDTIAGAVQKGNAPLRNWLNKEL 322 >gi|256828611|ref|YP_003157339.1| extracellular solute-binding protein family 3 [Desulfomicrobium baculatum DSM 4028] gi|256577787|gb|ACU88923.1| extracellular solute-binding protein family 3 [Desulfomicrobium baculatum DSM 4028] Length = 247 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 94/264 (35%), Gaps = 22/264 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + +L + A + L GI+ FA V +G GFD Sbjct: 1 MLKR--AAFVIACLLCMAAGPALA-------EEKVLLNGIDANYPPFAYVDQSGKPSGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +++ + K++++P++ L +K+ID + T R S + F Sbjct: 52 VDAVDWIAAKMG---FKVKHVPVDWDGIIPNLLAKKIDFICSGMTITAER--SEKVNFTA 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + F+ K + + ++ +QAGT+ +AD + K+ +++ Sbjct: 107 PYWEVKNVFVTKKDSALKAEEIYGKEVTVGMQAGTSEAKWMADEKEKQGWKFTIKLYDSA 166 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA + A RP + I+ P A+ + D E + Sbjct: 167 PMAIEDLVNGRLDAAAMNYP--PARDAEKKRPVQ--IVGIFGEVEPFGAAVRKEDKELLD 222 Query: 240 IVS---WTHYAMVTAEELGITQKN 260 ++ A EEL N Sbjct: 223 TLNKGFELLKADPYWEELIAKHLN 246 >gi|298492610|ref|YP_003722787.1| family 1 extracellular solute-binding protein ['Nostoc azollae' 0708] gi|298234528|gb|ADI65664.1| extracellular solute-binding protein family 3 ['Nostoc azollae' 0708] Length = 292 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 49/242 (20%), Positives = 94/242 (38%), Gaps = 13/242 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + ILCL L T + + L +I+KRG+L + L G+ +G ++D + Sbjct: 32 LILILCLFSLG-TDLVASGATLPEIQKRGYLTVAVKDNLRPLGFRDDKGNLQGLEIDLAK 90 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 L++ + P +++ P+ +R + +ID+ N T R ++F Y+D Sbjct: 91 RLANDLLGKPDAVKFQPVANSDRLPVIVENKIDLAIANVTATESRSRI--VSFSVPYYYD 148 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G + K I+ + L I V ++T + + I + Sbjct: 149 GAAIVT-KDTSINQLEDLYRRKIAVLNNSSTIFYVKYFIPK----SELIGVSSYAQAQEK 203 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIVSW 243 ++ DA+ D S L + + ILP +S PL+ + + E+ V+ Sbjct: 204 IESNAVDAFAADNSLLSGWVQEYPK---YHILPSQLSTEPLSVVMAKGLQYDEFRRSVNE 260 Query: 244 TH 245 Sbjct: 261 AI 262 >gi|318604514|emb|CBY26012.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Yersinia enterocolitica subsp. palearctica Y11] Length = 263 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 94/245 (38%), Gaps = 11/245 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L +++ + + A L I++RG L+ + F V + +G+D Sbjct: 3 MKKRML-ALLGAVLILVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ + K+Q +P+ + R LQ+ ++D++ + RE +AF Sbjct: 62 IDMAHYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREK--AIAFSR 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G K+ + QL+G ++ V G ++ L++ +E Sbjct: 117 AYAPFFLGVFGAKEDALKQPEQLAGKTVGVTRGAVEDMVLSELAPK---DAQIKRYEDNN 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +AY + + D L L P++ + ++ SP + QG+ Sbjct: 174 TTLSAYLSGQVDYLATGN--LVVSALARQNPAQAPVAKFMLKDSPCYIGLRQGEAALKAK 231 Query: 241 VSWTH 245 V Sbjct: 232 VDALI 236 >gi|123444361|ref|YP_001008326.1| putative periplasmic solute-binding protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122091322|emb|CAL14208.1| putative periplasmic solute-binding protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 284 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 58/309 (18%), Positives = 100/309 (32%), Gaps = 65/309 (21%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKI 78 + +A L DIK+ G ++ + F + G+DVD A++ + + Sbjct: 25 GAAHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLGVK---V 81 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + N R L SK++D+++ N T R + F + GQ FI HK + Sbjct: 82 ELRATNPANRIPLLTSKKVDLIAANFTITDDRAK--EVNFSLPYFATGQKFIAHKG-VLK 138 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + I GT E+TL D + I ++ A R A T D Sbjct: 139 TPEDIGKLRIGADKGTVQEITLRDRYPTAK----VISYDDTPVAFTALRNGNVQAITQDD 194 Query: 199 SALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 + L L + I P I+K I +G+ V+ T Sbjct: 195 AKLVGLLGNLPEAQKADFEISPFSITKEYQGIGIPKGEDRLTAEVNET------------ 242 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 + ++K + ++DR G Sbjct: 243 -------------------LVKLEKDGEAAK---------------------IYDRWFGP 262 Query: 317 QSELKIPRG 325 +++ PRG Sbjct: 263 ETKAAQPRG 271 >gi|227544431|ref|ZP_03974480.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri CF48-3A] gi|300908278|ref|ZP_07125743.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri SD2112] gi|68160716|gb|AAY86804.1| lr0525 [Lactobacillus reuteri] gi|227185594|gb|EEI65665.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri CF48-3A] gi|300894525|gb|EFK87882.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri SD2112] Length = 276 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 100/255 (39%), Gaps = 19/255 (7%) Query: 1 MYKDF----FVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVK-A 52 M K + ++L + +L ++ +L + + + G+ F Sbjct: 1 MKKYWRLISLSALLFVALLTLSACGTSIAKKDVLTEDMRSQRIIWGVKADTRLFGLENIR 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G +GF++D A++ I K ++P+ + R L++ ID + T RE Sbjct: 61 TGKLEGFEIDLATAITKKILGPQGKPIFVPVTSGTRVPLLKNGNIDAIMATMTITPEREK 120 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMK 170 + F + GQ ++ K I ++S L+ GA I +G+ + +A + Sbjct: 121 --QVDFTHSYFDAGQSLLVKKGSPIKNISDLNRRGAIILGVSGSNSVKNVAKFAPKA--- 175 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + A ++ + DA T D LY + + P + ++ +K P A+ Sbjct: 176 -RALQLSDYAQAMTALKSKQGDALTTDNGILYGMAA--ENPG-YEVVGGNFTKEPYGIAV 231 Query: 231 IQGDTEWYNIVSWTH 245 + T + N ++W Sbjct: 232 NKNQTRFRNKLNWAL 246 >gi|322373403|ref|ZP_08047939.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C150] gi|321278445|gb|EFX55514.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C150] Length = 270 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 84/254 (33%), Gaps = 17/254 (6%) Query: 1 MY--KDFFVSILCLIIL-FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANG 54 M K + + + L + S++ + L +K +G L +N F Sbjct: 1 MKTWKKLLLGLTGVFALTALAACSSSNNTLDKVKDKGTLTVALNPHFAPFEFKTLQDGKD 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G DV+ +A++ + +++ ++ ++QS + DI T R+ + Sbjct: 61 TVVGADVEIAKAIADELGVK---VKFSEMSFDNVLASVQSGKADIAISGISATKERQKT- 116 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y ++ K S + S+ VQ G+ E K++ + Sbjct: 117 -FDFSDTYYESETVLVVKKDDTGTYKQTSDFAKKSVAVQKGSIQEKI----AKSNLSDAN 171 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + + E ++ + + + + N + I S A A+ + Sbjct: 172 VVALSQPGEAINELKSGQVNGVVLEKAIAQGYVEQNSDLAVSDIKLKSDSNDAYAVAMPK 231 Query: 233 GDTEWYNIVSWTHY 246 G + V+ Sbjct: 232 GSDKLKAKVNKVIT 245 >gi|23464650|ref|NP_695253.1| glutamate-binding protein of ABC transporter system [Bifidobacterium longum NCC2705] gi|317481691|ref|ZP_07940724.1| bacterial extracellular solute-binding protein, family 3 [Bifidobacterium sp. 12_1_47BFAA] gi|23325209|gb|AAN23889.1| glutamate-binding protein of ABC transporter system [Bifidobacterium longum NCC2705] gi|316916870|gb|EFV38259.1| bacterial extracellular solute-binding protein, family 3 [Bifidobacterium sp. 12_1_47BFAA] Length = 266 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 94/246 (38%), Gaps = 15/246 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++ L + + + A + G ++ GI G +G + GFDVD + Sbjct: 1 MIAALAAVACTMSLAACGAD------ETGKIRIGIKFDQPGLGFK-KSGTYVGFDVDVAK 53 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + +I + +K+R +Q+ +D++ T R+ ++F + Sbjct: 54 YVAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKK--AVSFAGPYFVA 111 Query: 126 GQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 GQ ++ K I+ L+G +C G+T+ T+ + F + + + E Sbjct: 112 GQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFAS---EVQLMEQPGYAECAT 168 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + DA T D L L + ++ ++ I +GDT+ ++ Sbjct: 169 ALFSGIVDAVTTDDIILAGLASASRGK--LKVVGKPFTQEYYGVGIKKGDTQLATKINNA 226 Query: 245 HYAMVT 250 M+ Sbjct: 227 IVDMIQ 232 >gi|209695418|ref|YP_002263347.1| arginine/ornithine periplasmic binding protein-dependent transporter [Aliivibrio salmonicida LFI1238] gi|208009370|emb|CAQ79643.1| arginine/ornithine periplasmic binding protein-dependent transporter [Aliivibrio salmonicida LFI1238] Length = 258 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 86/252 (34%), Gaps = 25/252 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +I+ + + + K+ ++ GI F+ + +G+ KGFD Sbjct: 1 MKKWLLAAIVASTAVTGAAQA---------KEWKQIRFGIEGAYPPFSWTEPSGELKGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + ++ + + + +L +++ D + T R+ + F Sbjct: 52 VDIANALCKEM---EARCKIVAQDWDGIIPSLLARKYDAIIAAMSITEERKK--KIDFTE 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F+ K + + L G ++ VQ TT + L D F + Sbjct: 107 KYALIPNKFVAKKGTELVMTKEGLKGVTVGVQRATTHDKYLTDNF---GSGVELKRYGSF 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233 +E +A R D GD SAL L E+ + P A + Sbjct: 164 DEAYLDLKAGRIDTVLGDASALEEGLLNKPGGKEYEFVG-PSLTDPKWFGDGFGIATRKQ 222 Query: 234 DTEWYNIVSWTH 245 D + ++ Sbjct: 223 DKDLTKQLNAAI 234 >gi|46190372|ref|ZP_00206441.1| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Bifidobacterium longum DJO10A] gi|322691618|ref|YP_004221188.1| glutamate ABC transporter substrate-binding protein [Bifidobacterium longum subsp. longum JCM 1217] gi|320456474|dbj|BAJ67096.1| glutamate ABC transporter substrate binding component [Bifidobacterium longum subsp. longum JCM 1217] Length = 266 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 94/246 (38%), Gaps = 15/246 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++ L + + + A + G ++ GI G +G + GFDVD + Sbjct: 1 MIAALAAVACTMSLAACGAD------ETGKIRIGIKFDQPGLGFK-KSGTYVGFDVDVAK 53 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + +I + +K+R +Q+ +D++ T R+ ++F + Sbjct: 54 YVAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKK--AVSFAGPYFVA 111 Query: 126 GQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 GQ ++ K I+ L+G +C G+T+ T+ + F + + + E Sbjct: 112 GQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFAS---EVQLMEQPGYAECAT 168 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + DA T D L L + ++ ++ I +GDT+ ++ Sbjct: 169 ALFSGIVDAVTTDDIILAGLASASRGK--LKVVGKPFTQEYYGVGIKKGDTQLATKINNA 226 Query: 245 HYAMVT 250 M+ Sbjct: 227 IVDMIQ 232 >gi|116494753|ref|YP_806487.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei ATCC 334] gi|116104903|gb|ABJ70045.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus casei ATCC 334] Length = 270 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 93/256 (36%), Gaps = 13/256 (5%) Query: 1 MYKDFFVSILCL-----IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M + ++++ L ++ + T + I++ + G++ V + NG Sbjct: 1 MKRRIVLALMLLVTLLGTVISGCARETVGNSWPRIERTKKVVIGLDDTFVPMGFRQKNGQ 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+D+D +A+ + + + ++ + L+++ ID++ T R+ Sbjct: 61 LAGYDIDLAKAVFKRYGIN---VDFQTIDWSMKETELKNQTIDLIWNGYSVTPERKE--K 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172 +AF + Q + K I ++ ++G ++ VQ G++ L K Sbjct: 116 VAFSDNYLINHQILVTKTKSNIKTIKDMAGKTLGVQTGSSGAFDLDAQPKLLKNFIANKT 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ + A R D PS + I D A + + Sbjct: 176 PILYDTFNDAFIDLDAGRIQGILMDEVYARYYIAHKPDPSSYRIASDDFPPENFAVGMRK 235 Query: 233 GDTEWYNIVSWTHYAM 248 D + ++ A+ Sbjct: 236 SDNVLRSKINAGLKAL 251 >gi|299068311|emb|CBJ39535.1| Amino-acid ABC transporter binding protein ybeJ [Ralstonia solanacearum CMR15] Length = 288 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 94/250 (37%), Gaps = 7/250 (2%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 + + + + L I+ G ++ V F+ + G G+ +D C + Sbjct: 1 MLAVPLAVSAVHAMASTPTLDRIRDTGTIRLAYREDSVPFSYMDG-GKPIGYSIDICSRV 59 Query: 68 SSAI---FDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 AI P K+QYLP+ A R + S + D+ +T E +AF Y Sbjct: 60 VDAIRTSLKRPDLKVQYLPVTAVNRMDTIASGKADLECGST--NNAPERREKVAFTIPHY 117 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 ++ G+ L G ++ G++ + A + + ++ Sbjct: 118 ITKGRMLVKASSGLQQWEDLHGKTVVAARGSSASDVMHKLNDATGLGMRAVDTNDLKTAF 177 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + + DA+ GD L ++ T+D P+++V+ S A + + D ++ +V Sbjct: 178 SMLSTGKADAFAGDDVLLAGMRATSDNPTDYVVAGKTQLVSSYAMMMSKQDADFKKLVDQ 237 Query: 244 THYAMVTAEE 253 + ++ E Sbjct: 238 SMTRLIVDGE 247 >gi|261407770|ref|YP_003244011.1| family 3 extracellular solute-binding protein [Paenibacillus sp. Y412MC10] gi|261284233|gb|ACX66204.1| extracellular solute-binding protein family 3 [Paenibacillus sp. Y412MC10] Length = 255 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 89/250 (35%), Gaps = 18/250 (7%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + L+ + S S + L GI+ + + G Sbjct: 1 MKKIASVLAGFMLLLTVVGCSSSASGG--------NELVVGIDDKFAPMGFRDESNEIVG 52 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D+ RA + + + +++ P++ K + L S +ID++ T R+ + F Sbjct: 53 FDIDYARAAAEKMGKE---VKFQPIDWKSKESELSSGRIDLIWNGYTITDERKE--KVLF 107 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q + I+S+S L+G + +Q+ ++ L+ + H F Sbjct: 108 TKPYLENSQVVAVLADSDIASISDLAGKQVGLQSLSSAADALSAN-EIHTQVKKINEFPD 166 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R +A D + + + IL + ++ + +G+ E Sbjct: 167 NMLALSDLKNGRVEAVIIDEVVMKYFMSKEE--GTYKILEESLAPEQYGIGVKKGNEELL 224 Query: 239 NIVSWTHYAM 248 + M Sbjct: 225 ESLQKALDEM 234 >gi|296130894|ref|YP_003638144.1| extracellular solute-binding protein family 3 [Cellulomonas flavigena DSM 20109] gi|296022709|gb|ADG75945.1| extracellular solute-binding protein family 3 [Cellulomonas flavigena DSM 20109] Length = 318 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 50/226 (22%), Positives = 88/226 (38%), Gaps = 12/226 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S + +I+ RG L G++ + G +GFD+D R ++ AI DP I++ Sbjct: 72 GSTMDEIRARGNLVVGVSADTLRMGARNPFTGQIEGFDIDVARQVAQAILGDPDAIRFRV 131 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + A +R L++ ++D+++R R +AF + GQ ++ + S+ Sbjct: 132 ITAGDRIPVLENHEVDLVTRAFTMNCER--WDQIAFSAEYFTAGQKVLVSTESQAQSIED 189 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G +C GTTT L + + A ++ R DA TGD + L Sbjct: 190 LDGQRVCAPEGTTTLERLDE------YDVEAVGARTHSACLALFQQGRVDAITGDDTVLA 243 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + ++ D S P I + V+ M Sbjct: 244 GFVAQDP---YAKVVGDAFSAEPYGVGIAADRVDLVRFVNAVLDGM 286 >gi|157368266|ref|YP_001476255.1| extracellular solute-binding protein [Serratia proteamaculans 568] gi|157320030|gb|ABV39127.1| extracellular solute-binding protein family 3 [Serratia proteamaculans 568] Length = 279 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 61/328 (18%), Positives = 106/328 (32%), Gaps = 65/328 (19%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M L + + + +A L DIKK G ++ + F + + G+ Sbjct: 1 MKHRVLALTLLASLTSLATGAAHADKLDDIKKAGVVRIAVFDSNPPFGYIDPQSKKLVGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A+ A+ ++ N R L SK++D+++ N T R + F Sbjct: 61 DVDVADAIGKALGVK---VELRATNPANRIPLLVSKKVDLIAANFTITDERAK--EVNFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI HK + + + I GT E+TL +++ I ++ Sbjct: 116 VPYFATGQKFIAHKG-VLKTPEDIKKLRIGADKGTVQEITLREHYPTAK----VISYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237 A R A T D + L L + I P I+K I +G+ Sbjct: 171 PLAFVALRNGNVQAITQDDAKLVGLLGNLPAAQKADFEISPFSITKEYQGVGIPKGEDRL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 V+ T + ++K + Sbjct: 231 TASVNDT-------------------------------LIKLEKDGEAAK---------- 249 Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRG 325 ++DR G +++ PRG Sbjct: 250 -----------IYDRWFGPETKTAQPRG 266 >gi|227877827|ref|ZP_03995851.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus crispatus JV-V01] gi|256850704|ref|ZP_05556128.1| glutamine ABC transporter [Lactobacillus crispatus MV-1A-US] gi|262047073|ref|ZP_06020032.1| glutamine ABC transporter [Lactobacillus crispatus MV-3A-US] gi|293381623|ref|ZP_06627607.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus crispatus 214-1] gi|227862588|gb|EEJ70083.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus crispatus JV-V01] gi|256712475|gb|EEU27472.1| glutamine ABC transporter [Lactobacillus crispatus MV-1A-US] gi|260572650|gb|EEX29211.1| glutamine ABC transporter [Lactobacillus crispatus MV-3A-US] gi|290921807|gb|EFD98825.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus crispatus 214-1] Length = 272 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 88/250 (35%), Gaps = 14/250 (5%) Query: 1 MYKDFFV--SILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M K F + SI+ L L + N ++ +K + G+ F + G Sbjct: 1 MRKKFLLIISIVVLFALPLSGCKQNKKQNVYQAVKTSKTINWGVKADTPLFGSINIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GF++D AL+ + K ++ A + L++ +D + T R+ Sbjct: 61 LNGFEIDLANALTHEMLGKNVKANFITTTANTKIQLLKNTNVDAVIAAMTITPERKK--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + GQ ++ I + L+ + V GTT + + Sbjct: 119 VEFSHPYFPAGQSIMVADSSAIKNAKNLNNKKVLVVKGTTAADAIHQVAPKA----EILQ 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + AA +A + DA+ D L S + ++ + P A+ +G Sbjct: 175 FDDYGQAFAALKAGQGDAFVTDNGILAG---ILRDSSGYKLVGGTFTNQPYGIAVNKGQN 231 Query: 236 EWYNIVSWTH 245 + ++ Sbjct: 232 DMLKHINTAL 241 >gi|222109803|ref|YP_002552067.1| family 3 extracellular solute-binding protein [Acidovorax ebreus TPSY] gi|221729247|gb|ACM32067.1| extracellular solute-binding protein family 3 [Acidovorax ebreus TPSY] Length = 296 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 87/257 (33%), Gaps = 7/257 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + ++ + L + +L ++ G L V F+ V G G+ +D Sbjct: 4 KQGWKALGAAVALCCAVGAQAQGVLERVRGGGPLVLAHRESSVPFSYVHE-GKPMGYALD 62 Query: 63 FCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C ++ +Q + + R +++ + D+ +T R + F Sbjct: 63 LCLHIAEVVRKKTGMKNMPVQLVQVTPANRIEMVKTGKADMECGSTTNNAERRKDVA--F 120 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G ++ ++ + L G + GTT + M+ + Sbjct: 121 TIPHFITGARLLVPAASTVTRMEDLEGKKLVSTKGTTPYKAAEQANRERLMRIQLVEAPD 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + DA+ D LY L P ++ ++ PLA + + D E+ Sbjct: 181 HEAAVVMVEKGQADAFVMDDVLLYGLAANRPDPKALKVVGRFVTTEPLAIMLPKNDPEFK 240 Query: 239 NIVSWTHYAMVTAEELG 255 +V ++ + E+ Sbjct: 241 KLVDEEMRRLIVSNEIN 257 >gi|318608046|emb|CBY29544.1| putative periplasmic solute-binding protein [Yersinia enterocolitica subsp. palearctica Y11] gi|330861768|emb|CBX71941.1| hypothetical protein YEW_BV07660 [Yersinia enterocolitica W22703] Length = 284 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 59/309 (19%), Positives = 100/309 (32%), Gaps = 65/309 (21%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKI 78 + +A L DIKK G ++ + F + G+DVD A++ + + Sbjct: 25 GAAHADKLDDIKKEGVVRIAVFDSNPPFGYIDPHTKKLVGYDVDVANAIAKDLGVK---V 81 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + N R L SK++D+++ N T R + F + GQ FI HK + Sbjct: 82 ELRATNPANRIPLLTSKKVDLIAANFTITDDRAK--EVNFSLPYFATGQKFIAHKG-VLK 138 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + I GT E+TL D + I ++ A R A T D Sbjct: 139 TPEDIGKLRIGADKGTVQEITLRDRYPTAK----VISYDDTPVAFTALRNGNVQAITQDD 194 Query: 199 SALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 + L L + I P I+K I +G+ V+ T Sbjct: 195 AKLVGLLGNLPEAQKADFEISPFSITKEYQGIGIPKGEDRLTAEVNET------------ 242 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316 + ++K + ++DR G Sbjct: 243 -------------------LVKLEKDGEAAK---------------------IYDRWFGP 262 Query: 317 QSELKIPRG 325 +++ PRG Sbjct: 263 ETKAAQPRG 271 >gi|291533533|emb|CBL06646.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Megamonas hypermegale ART12/1] Length = 251 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 83/247 (33%), Gaps = 14/247 (5%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG--DWKGFDVDFCRALSS 69 + F ++S L+ G N F NG +++GFD+D RA++ Sbjct: 3 AVSALFAGCGQDSSDKAASSGEKVLRVGTNADFAPFEFQDENGSTEYQGFDMDLIRAVAK 62 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + +N A++S IDI++ R+ + F Y G Sbjct: 63 EMGYTAE---IQNVNFDGLIPAMESGNIDIIASGMTINEERK--NQVEFSAPYYISGLTI 117 Query: 130 IMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ K I+ + L G I VQ GTT+ A + +A Sbjct: 118 VVPKDNTDINGFADLKGKKIAVQIGTTSMEEAQKIEGA-----EVKALNSSADTFMELKA 172 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 DA D+ + + ++ L D ++ A+ +G+TE V + Sbjct: 173 GNVDAVINDLPVN-DYYIVKTKATDVKRLDDKLTSEEYGFAMKKGNTELKQKVDAALKTL 231 Query: 249 VTAEELG 255 E Sbjct: 232 KENGEYD 238 >gi|169334069|ref|ZP_02861262.1| hypothetical protein ANASTE_00462 [Anaerofustis stercorihominis DSM 17244] gi|169258786|gb|EDS72752.1| hypothetical protein ANASTE_00462 [Anaerofustis stercorihominis DSM 17244] Length = 269 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 84/249 (33%), Gaps = 7/249 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + ++ T F + G + + +G++ GFD Sbjct: 1 MKKKLALVLALFMVAGLTLFGCGSKDENAKNDDKTFVVGFDAEFPPYGYKDDDGNYIGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + ++ P++ + + + S ID + + + Sbjct: 61 LDLAQEVCDR---NGWTLKKQPVDWDSKDMEIDSGTIDCIWNGFTMNGRED---DYTWTK 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA-DYFKAHNMKYHPIVFERV 179 + Q +++KK GI + L G ++ Q ++ L D K + Sbjct: 115 PYIDNKQIIVVNKKTGIKNFKGLKGKTVETQKDSSALAALQGDQKKLASTFATLTEVADY 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + CDA DI + S+ +L ++IS A +G+TE + Sbjct: 175 NSAFMDLESGACDAIAMDIGVANYQINSRKNASDFEVLDEVISSEKYAVGFKKGNTELRD 234 Query: 240 IVSWTHYAM 248 V T M Sbjct: 235 KVQKTLDEM 243 >gi|319795551|ref|YP_004157191.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315598014|gb|ADU39080.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 319 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 88/256 (34%), Gaps = 6/256 (2%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + L L + I++ + G+ F+ V A G+ VD Sbjct: 25 TLIPASFALTALAALPVHAAVDTMSKIRETRTIVLGVREAAAPFSFVNAQKQPVGYSVDL 84 Query: 64 CR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 C + + K+QY P++ +R L S +ID+ +T T+ R + F Sbjct: 85 CMNAVEEIRRELKLPDIKVQYKPVSGPDRIPKLLSGEIDLECGSTTNTMAR--QEKVDFS 142 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + + + +V L + + GTT+E + ++ Sbjct: 143 YTFFVAGMRVLTSQNLHVDTVKDLQKQPVALTKGTTSEKLFRQLAEGELRDAKFTTYDNN 202 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + + A+ D S L L + + +S P A +GDT Sbjct: 203 VEAFKALKEGKVRAFAQDDSLLQGLVSNDKTIDTLSLSRLALSVEPYAVMARKGDTALLA 262 Query: 240 IVSWTHYAMVTAEELG 255 V + + ++ E+ Sbjct: 263 AVDRSLAQLYSSGEIN 278 >gi|29828504|ref|NP_823138.1| glutamate binding periplasmic protein [Streptomyces avermitilis MA-4680] gi|29605607|dbj|BAC69673.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces avermitilis MA-4680] Length = 305 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 98/279 (35%), Gaps = 40/279 (14%) Query: 1 MYKD----FFVSILCLIILFFTSFSTNAS--------------------------ILGDI 30 M + ++++ + L T+ S Sbjct: 1 MIRSTRVCLALALVLITALLATACGKEGSPPTKGPATDKLPDYQVAQGFQLNDSPTWKRA 60 Query: 31 KKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 KKRG+L G+ E +G + GFD++ + +S+++ DP I++ + + R Sbjct: 61 KKRGYLTVGVKEDQPYLGERDPASGAFSGFDIEIAKMMSASLGFDPGTIRFKTIASANRE 120 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASI 148 ALQ+ QID R+ +G F Y GQ ++ K +GI+ L+G + Sbjct: 121 TALQNGQIDYYVGTYTINDKRKKLVG--FAGPYYLAGQSLLVRKDEQGINGPQDLAGKRV 178 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 C AG+T + + + ++ ++ DA T D + L Sbjct: 179 CSAAGSTPYQRIQQDYPK----VKLVAYDTYSVCVDNLLTYQVDAVTTDDAILIGYAAKV 234 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 P E ++ S+ P + + D + A Sbjct: 235 --PEELKVVGKPFSEEPYGIGVPRNDNALRFALDDALEA 271 >gi|152968872|ref|YP_001333981.1| cysteine ABC transporter periplasmic substrate binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206578283|ref|YP_002240191.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Klebsiella pneumoniae 342] gi|262042357|ref|ZP_06015519.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288936935|ref|YP_003440994.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|290510009|ref|ZP_06549379.1| cysteine transport system periplasmic binding component [Klebsiella sp. 1_1_55] gi|330006799|ref|ZP_08305702.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella sp. MS 92-3] gi|150953721|gb|ABR75751.1| cysteine transport protein (ABC superfamily, peri_bind) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206567341|gb|ACI09117.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Klebsiella pneumoniae 342] gi|259040265|gb|EEW41374.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288891644|gb|ADC59962.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|289776725|gb|EFD84723.1| cysteine transport system periplasmic binding component [Klebsiella sp. 1_1_55] gi|328535739|gb|EGF62181.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella sp. MS 92-3] Length = 269 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 89/235 (37%), Gaps = 11/235 (4%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKI 78 A L DIK G +K F V A G+DVDF +AL+ A+ + Sbjct: 19 SQAQADQLADIKAAGVVKVATFDANPPFGSVDAKTHHIVGYDVDFAQALAKALGVK---L 75 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + N R LQS + D++ + T R + + F + GQ F++ Sbjct: 76 ELVATNPANRIPLLQSGKADLIVADITITPER--AQVIDFSTPYFVTGQQFLVPAGSP-D 132 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + S A I GTT E L F + ++ + A R A T D Sbjct: 133 KLDEYSKARIGAVKGTTGEQALHQRFPQA----RVLSYDDIPLALTALRNGNVQAITQDS 188 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + L L ++ ILPD++SK + + +G+ V+ + E Sbjct: 189 TILAGLLAEAPDKAKFKILPDLLSKEEIGVGVKKGEPALLKAVNDELVKLEKTGE 243 >gi|111223300|ref|YP_714094.1| putative ABC transporter glutamine-binding protein GlnH [Frankia alni ACN14a] gi|111150832|emb|CAJ62536.1| putative ABC transporter glutamine-binding protein GlnH [Frankia alni ACN14a] Length = 350 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 88/234 (37%), Gaps = 11/234 (4%) Query: 14 ILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAI 71 + T + A L I++RG+L+ + + F + A G ++GFDVD + AI Sbjct: 91 AVPPTPGAMPAGTFLATIQQRGYLRAAVLADVPPFGSINAFTGQFEGFDVDLANRIGRAI 150 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 F +++ ER L +DI+ R + F + +++ Q ++ Sbjct: 151 FGTDGHVRFRATTYAERIPVLTHGDVDIVVATMTTNCERRR--QIDFSTVYWYETQRVLV 208 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 S+ L G +C AGTTT TL + + + ++ + Sbjct: 209 PLGSPARSLDDLGGQPVCTAAGTTTVDTLRRT----SSHPVVRTVPNIADCLVLLQSGQV 264 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 T + L + P H++ P + + P A + +G E V+ Sbjct: 265 AGITTTSAVLAGMAAQ--DPRVHLVGPGLSN-EPDAIGVARGHPELTRFVNGVL 315 >gi|292669467|ref|ZP_06602893.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas noxia ATCC 43541] gi|292648920|gb|EFF66892.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas noxia ATCC 43541] Length = 257 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 79/257 (30%), Gaps = 13/257 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M +L ++ S ++ L+ G F ++GF Sbjct: 1 MKLKKLALVLTGALVSLALVGCGGSNDQAKQESKVLRVGSAIDFAPFEFQDEGQKDYQGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D RA++ + + + ALQ+K ID++ R+ + F Sbjct: 61 DMDLIRAIAKEMGSEAE---IQNIGFDGLIPALQAKNIDVIISGMTINDERKE--RVNFS 115 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ + I S S L G + VQ GTT+ + + Sbjct: 116 DPYYQSGLTMVVRSDEENIKSFSDLKGHKVAVQIGTTSAKMVKEM-----EGVTITELNT 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + +A DA D + + L D +S A+ + + E Sbjct: 171 PADCFIELKARGVDAVVNDRPVN-DYYINQSQAVGVKSLDDKLSAEDYGIAMAKDNVELQ 229 Query: 239 NIVSWTHYAMVTAEELG 255 ++ + E Sbjct: 230 KKINEALKKLHDNGEYD 246 >gi|271501781|ref|YP_003334807.1| family 3 extracellular solute-binding protein [Dickeya dadantii Ech586] gi|270345336|gb|ACZ78101.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech586] Length = 263 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 92/247 (37%), Gaps = 13/247 (5%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K +++ +L + A L DI+KRG L+ + F V + +G Sbjct: 1 MKIGKRVL-AVVGAALLMVQAGQAMADQLQDIQKRGVLRVAVPQDFPPFGSVGTDLQPQG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +D+D R L+S + K+Q +P+++ R LQ+ ++D++ + RE + F Sbjct: 60 YDIDMARYLASEM---KLKLQLVPVSSANRVPYLQTDKVDLVISSLGKNAEREKV--IDF 114 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G K ++S L G ++ V G ++ L D +E Sbjct: 115 SSAYAPFFLGVFGPKDTTVTSPDALQGKTVGVTRGAVEDMVLTDIAPK---TADIKRYED 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +AY + + + A+ P + + ++ SP + + + Sbjct: 172 NNTTLSAYMSGQVQYIATGNLVVAAIA--EKNPEKAPVAKFMLKDSPCYIGLKKDEPALK 229 Query: 239 NIVSWTH 245 V+ Sbjct: 230 AKVNELI 236 >gi|227535250|ref|ZP_03965299.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187134|gb|EEI67201.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 270 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 93/256 (36%), Gaps = 13/256 (5%) Query: 1 MYKDFFVSILCL-----IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M + ++++ L ++ + T + I++ + G++ V + NG Sbjct: 1 MKRRIVLALMLLVTLLGTVISGCARETVGNSWPRIERTKKVVIGLDDTFVPMGFRQKNGQ 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+D+D +AL + + + ++ + L+++ ID++ T R+ Sbjct: 61 LAGYDIDLAKALFKRYGIN---VDFQTIDWSMKETELKNQTIDLIWNGYSVTPERKE--K 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172 +AF + Q + K I ++ ++G ++ VQ G++ L K Sbjct: 116 VAFSDNYLINHQILVTKTKSNIKTIKDMAGKTLGVQTGSSGAFDLDAQPKLLKNFIANKT 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 PI+++ + A R D PS + I D A + + Sbjct: 176 PILYDTFNDAFIDLDAGRIQGILMDEVYARYYIAHKPDPSSYRIASDDFPPENFAVGMRK 235 Query: 233 GDTEWYNIVSWTHYAM 248 D + ++ A+ Sbjct: 236 SDNVLRSKINAGLKAL 251 >gi|53719422|ref|YP_108408.1| putative amino acid transport system, exported protein [Burkholderia pseudomallei K96243] gi|76810718|ref|YP_333446.1| extracellular solute-binding protein [Burkholderia pseudomallei 1710b] gi|121599839|ref|YP_992996.1| extracellular solute-binding protein [Burkholderia mallei SAVP1] gi|124384138|ref|YP_001026328.1| polar amino acid ABC uptake transporter substrate binding protein [Burkholderia mallei NCTC 10229] gi|126441076|ref|YP_001058918.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 668] gi|126448524|ref|YP_001080398.1| extracellular solute-binding protein [Burkholderia mallei NCTC 10247] gi|126454167|ref|YP_001066160.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106a] gi|134282189|ref|ZP_01768894.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 305] gi|167719672|ref|ZP_02402908.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei DM98] gi|167738660|ref|ZP_02411434.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 14] gi|167815884|ref|ZP_02447564.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 91] gi|167845801|ref|ZP_02471309.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei B7210] gi|167894372|ref|ZP_02481774.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 7894] gi|167902774|ref|ZP_02489979.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei NCTC 13177] gi|167911019|ref|ZP_02498110.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 112] gi|167919034|ref|ZP_02506125.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei BCC215] gi|217421274|ref|ZP_03452778.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 576] gi|237812174|ref|YP_002896625.1| polar amino acid ABC uptake transporter substrate binding protein [Burkholderia pseudomallei MSHR346] gi|242315405|ref|ZP_04814421.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106b] gi|254178648|ref|ZP_04885303.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia mallei ATCC 10399] gi|254179866|ref|ZP_04886465.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1655] gi|254188730|ref|ZP_04895241.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|254197737|ref|ZP_04904159.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei S13] gi|254258483|ref|ZP_04949537.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710a] gi|254297706|ref|ZP_04965159.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 406e] gi|254358534|ref|ZP_04974807.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia mallei 2002721280] gi|52209836|emb|CAH35808.1| putative amino acid transport system, exported protein [Burkholderia pseudomallei K96243] gi|76580171|gb|ABA49646.1| extracellular solute-binding protein [Burkholderia pseudomallei 1710b] gi|121228649|gb|ABM51167.1| extracellular solute-binding protein [Burkholderia mallei SAVP1] gi|124292158|gb|ABN01427.1| polar amino acid ABC uptake transporter substrate binding protein [Burkholderia mallei NCTC 10229] gi|126220569|gb|ABN84075.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 668] gi|126227809|gb|ABN91349.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106a] gi|126241394|gb|ABO04487.1| extracellular solute-binding protein [Burkholderia mallei NCTC 10247] gi|134246227|gb|EBA46316.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 305] gi|148027661|gb|EDK85682.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia mallei 2002721280] gi|157807287|gb|EDO84457.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 406e] gi|157936409|gb|EDO92079.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|160699687|gb|EDP89657.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia mallei ATCC 10399] gi|169654478|gb|EDS87171.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei S13] gi|184210406|gb|EDU07449.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1655] gi|217395016|gb|EEC35034.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 576] gi|237505304|gb|ACQ97622.1| polar amino acid ABC uptake transporter substrate binding protein [Burkholderia pseudomallei MSHR346] gi|242138644|gb|EES25046.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106b] gi|254217172|gb|EET06556.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710a] Length = 271 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 92/253 (36%), Gaps = 11/253 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M F + L + L + +A L DI+K G L+ F V G Sbjct: 1 MKFKPFATWLLGLSLVAAHAAAHADRLDDIRKAGVLRVATFDSNPPFGFVDPRTNRIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + ++ P N R L S ++D++ N T R + F Sbjct: 61 DVDYAQALADRLGVK---LKLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F+ K + S QL+ I GTT E+TL + + + ++ Sbjct: 116 VPYFASGQQFLAKKG-VLKSADQLNRLRIGADKGTTNEVTLREKYPQA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + + IS + +G+ Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEVPAFSISNDYMGVGAPKGEPRLVA 230 Query: 240 IVSWTHYAMVTAE 252 V+ T + + Sbjct: 231 FVNETLTDLEASG 243 >gi|218296357|ref|ZP_03497100.1| extracellular solute-binding protein family 3 [Thermus aquaticus Y51MC23] gi|218243151|gb|EED09682.1| extracellular solute-binding protein family 3 [Thermus aquaticus Y51MC23] Length = 254 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 87/246 (35%), Gaps = 17/246 (6%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F+ IL L + F IKK G ++ G F A GF Sbjct: 1 MRKVLVFLGILALGLAF-----AQVRTFDQIKKSGEIRIGTEGAFPPFNYFDAKNQLTGF 55 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D A++ + P +++ + + L + D + + T R + F Sbjct: 56 EIDLGNAIAKKLGLKP---KWIAQSFDSLLIQLGQGRFDFVIASHGITEERAK--AVDFT 110 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ G I+ KK G + L G + VQ GTT +++ Sbjct: 111 NP-HYCTGGIIVSKKGGPKTKKDLEGKVVGVQIGTTYMEAAQKIPGVR----QVRTYQKD 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A R DA+ D + + + L +++ + +A A+ +G+ + Sbjct: 166 PDALQDLLAGRVDAWITDRFV-AKEAIKERKLEGTLQLGELVFQERVAMAVAKGNKSVLD 224 Query: 240 IVSWTH 245 ++ Sbjct: 225 ALNKAL 230 >gi|295692439|ref|YP_003601049.1| glutamine ABC transporter, glutamine-binding protein [Lactobacillus crispatus ST1] gi|295030545|emb|CBL50024.1| Glutamine ABC transporter, glutamine-binding protein [Lactobacillus crispatus ST1] Length = 272 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 90/250 (36%), Gaps = 14/250 (5%) Query: 1 MYKDFFV--SILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M K F + SI+ L L + N ++ +K + G+ F+ + G Sbjct: 1 MRKKFLLIISIVVLFALPLSGCKQNKKQNVYQAVKTSKTINWGVKADTPLFSSINIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GF++D AL+ + +K ++ A + L++ +D + T R+ Sbjct: 61 LNGFEIDLANALTHEMLGKNAKANFITTTANTKIQLLKNTNVDAVIAAMTITPERKK--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + GQ ++ I + L+ + V GTT + + Sbjct: 119 VEFSHPYFPAGQSIMVADSSAIKNAKNLNNKKVLVVKGTTAADAIHQVAAKA----EILQ 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + AA +A + DA+ D L S + ++ + P A+ +G Sbjct: 175 FDDYGQAFAALKAGQGDAFVTDNGILAG---ILRDSSGYKLVGGTFTNQPYGIAVNKGQN 231 Query: 236 EWYNIVSWTH 245 + ++ Sbjct: 232 DMLKHINTAL 241 >gi|330873992|gb|EGH08141.1| cystine transporter subunit [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 268 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 79/246 (32%), Gaps = 9/246 (3%) Query: 2 YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S + L++ + L IK G L G+ F+ V NG GF+ Sbjct: 7 RRTFLFSAMGLMLSAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDKNGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + + P AL SK++D++ + R+ + Sbjct: 67 VEFSEALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSEPY 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + I S LSG + V GT E L KA+ +E Sbjct: 124 TISGIQALVLKKNADAIKSAKDLSGKKVGVGLGTNYEQWL----KANVPGAEIKTYEDDP 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA D A + E + S+ A+ +G+ E Sbjct: 180 TKIQDLSVGRIDAILVDRLAALEIAAKTKDTKRELAPAGEAFSRQESGIALRKGEPELLA 239 Query: 240 IVSWTH 245 + Sbjct: 240 AIDKAI 245 >gi|170698703|ref|ZP_02889769.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170136407|gb|EDT04669.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 264 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 87/257 (33%), Gaps = 18/257 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +L ++ + + A +L +K+RG L+ G+ F G+ Sbjct: 1 MKISLLKKLLVAGLIGTSFAAATAHAADLLDQVKQRGTLRVGLEGTFPPFNAKNPQGELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + ++ LQ+ + D+++ T R+ + L Sbjct: 61 GFDVDIAKAVAAKLGVKAE---FVTTEWSGIIAGLQAGKFDVIANQVGITDKRKET--LD 115 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F P + I K S+ L G + V GT Sbjct: 116 FSPAYTYSSAQLIQRKDDTRQFKSLDDLKGKKLGVALGTNYMD-----MAKSVPGIDVKT 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E A R DA D L L + P ++ S +P +G+ Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFRKGNP 228 Query: 236 EWYNIVSWTHYAMVTAE 252 ++ + A + A+ Sbjct: 229 KFQKAIDDAM-AQLEAD 244 >gi|17544841|ref|NP_518243.1| substrate-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17427130|emb|CAD13650.1| probable substrate-binding periplasmic (pbp) abc transporter protein [Ralstonia solanacearum GMI1000] Length = 299 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 93/252 (36%), Gaps = 7/252 (2%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + + + + L I++ G ++ V F+ G G+ +D C Sbjct: 10 LAMLAVPLAVSAFHAMASTPTLDRIRETGIIRLAYREDSVPFSYTDG-GKPIGYSIDICS 68 Query: 66 ALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + A + K+QYLP+ A R + S + D+ +T E +AF Sbjct: 69 RVVDAIRTSLKRPELKVQYLPVTAANRMDTIASGKADLECGST--NNAPERREKVAFTIP 126 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y ++ G+ L G ++ G++ + A + + ++ Sbjct: 127 HYITKGRMLVKVSSGLQQWDDLHGKTVVAARGSSASDVMHKLNDATGLGMRTVDTNDLKT 186 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + DA+ GD L ++ T+D PS++V+ S A + + D ++ +V Sbjct: 187 AFAMLSTGKADAFAGDDVLLAGMRATSDNPSDYVVAGKTQLVSSYAMMMSKQDADFKKLV 246 Query: 242 SWTHYAMVTAEE 253 + ++ E Sbjct: 247 DQSMTRLIVDGE 258 >gi|326803632|ref|YP_004321450.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] gi|326651009|gb|AEA01192.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] Length = 497 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 93/268 (34%), Gaps = 19/268 (7%) Query: 2 YKDFFVSILCLIILFFTSF--------STNASILGDIK---KRG-FLKCGINTGLVGFAE 49 K + V ++ L+ + + + ++ KRG + G++ Sbjct: 8 KKSWIVMVIALVTILGLVTNHHVEAEEAAPQERMESVEEGPKRGDKVVIGLDDTFAPMGF 67 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 + GFD+D +A++ + + + P++ + L S ID+L T Sbjct: 68 RNGQNEIVGFDIDLAQAIAEIYGWE---LDFQPIDWAMKETELNSGNIDLLWNGVGITPE 124 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 RE + F + I K I +S L G +I Q+G+TT + + Sbjct: 125 REEQM--LFSQPYFESPNIVITKKGSPIKELSDLVGKTISTQSGSTTAEDIKGWPNQLYQ 182 Query: 170 K--YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 K P+++ E+ A + R DA D + + + + +A Sbjct: 183 KLAQKPVLYSSYNEVFADLDSGRVDAVVTDYTYGHYIMEVRGEEKYDSFVDPSKEPEQMA 242 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ + + ++ + + + Sbjct: 243 VAMRKSASGLKTMIDQGLDQVKASGKYD 270 >gi|313890041|ref|ZP_07823676.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus pseudoporcinus SPIN 20026] gi|313121402|gb|EFR44506.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus pseudoporcinus SPIN 20026] Length = 274 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 35/250 (14%), Positives = 81/250 (32%), Gaps = 12/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K ++ + + + KK + G + V +G Sbjct: 1 MKKLVITLTTVVVSISLVACGKSQAPKGDSWKTYKKEKTITLGFDNTFVPMGYKDESGKN 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDV+ +A+ + ++++ +N + L++ +ID++ T R+ + Sbjct: 61 TGFDVELAKAVFAEYG---IRVKFQAINWDLKETELKNGKIDMIWNGYSVTKERQA--KV 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHP 173 AF + Q + I S S + G ++ Q+ ++ Y K Sbjct: 116 AFSNPYMKNEQVLVSKNAAHIKSFSDMKGKTLGAQSASSGYDAFTRYPKVLKDSVKGQDA 175 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +E + + +R DA D ++ + + A + + Sbjct: 176 TQYETFTQGFIDLKNNRIDALLIDKVYANYYLKQEGDLEKYHMTKSDYAGEAFAVGVRKE 235 Query: 234 DTEWYNIVSW 243 D +++ Sbjct: 236 DKTLVKMINK 245 >gi|296157669|ref|ZP_06840503.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295891915|gb|EFG71699.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 264 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 86/251 (34%), Gaps = 17/251 (6%) Query: 1 MYKDFF--VSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + + LI FT+ + +A +L +K+RG L+ G+ F +G+ Sbjct: 1 MKFGLLKKILVAGLIGASFTAVTAHADDLLDQVKQRGTLRIGLEGTFPPFNSKAPSGELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+DVD +A+++ + P ++ LQ+ + D++ T R+ L Sbjct: 61 GYDVDIAKAVAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDARK--QALD 115 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F P + I K S+ L G + V GT Sbjct: 116 FSPAYTYSAAQLIQRKDDTRQFKSLEDLKGKKLGVGLGTNYMD-----MAKSVPGIDVKT 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E A R DA D L L + P ++ + +P +G+ Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLMKNSQLP--LRTGANVGAGNPSGIPFKKGNP 228 Query: 236 EWYNIVSWTHY 246 ++ + Sbjct: 229 KFAKAIDDAMT 239 >gi|257461102|ref|ZP_05626200.1| polar amino acid ABC uptake transporter substrate binding protein [Campylobacter gracilis RM3268] gi|257441476|gb|EEV16621.1| polar amino acid ABC uptake transporter substrate binding protein [Campylobacter gracilis RM3268] Length = 267 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 97/252 (38%), Gaps = 19/252 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L L A+ L DIK+ G ++ G+ F+ NG KGF+ Sbjct: 1 MKKILLSILLGAGALC-------ANSLADIKQAGEIRIGLQDSQPPFSF-DDNGTLKGFE 52 Query: 61 VDFCRALSSAIFDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 VD L +F + KI ++ + +K+R +L+ ++D++ T + + F Sbjct: 53 VDLANELVKNLFGNKKIKIDFISVASKDRVPSLEQNKVDLIISKLTVTK--DRVQKVDFS 110 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G + K IS + Q++ I GTT E N Y Sbjct: 111 YPYYSVQIGVLSRKDDNISRIDQIAHKKILSVKGTTAEEHFK------NAGYEIATCADA 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A +A + D + + + + + ++ +A A+ +G+TE + Sbjct: 165 NECVARLKAGEGIGFADDNTVVLGYA--RNDAALDAKIINLGKVDYIAVALSKGNTELLD 222 Query: 240 IVSWTHYAMVTA 251 V+ + M A Sbjct: 223 AVNSSLVKMYKA 234 >gi|291456584|ref|ZP_06595974.1| CjaA protein [Bifidobacterium breve DSM 20213] gi|291381861|gb|EFE89379.1| CjaA protein [Bifidobacterium breve DSM 20213] Length = 282 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 93/254 (36%), Gaps = 23/254 (9%) Query: 2 YKDFFVSILCLIILFFTSF------------STNASILGDIKKRGFLKCGINTGLVGFAE 49 K + + ++ + S + IKK G ++ L + Sbjct: 5 KKALAGVLAGVTLISVAACGNGPDPAAGGSSSQQGQTVEQIKKTGKIRIATFGDLPPYGY 64 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 VK +G G+DV + + + ++ +NA R +L+S ++D++ N T Sbjct: 65 VKNDGTRAGYDVALGNQIGKDLGVK---VDWVQVNADGRVDSLKSDKVDLVLANFTVTDE 121 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ + F G + I+S QL G + V GTT E +F Sbjct: 122 RK--QVVDFADPYMKVSIGVVSPDSAKITSADQLKGKQLAVTKGTTAEA----FFTEKYP 175 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 F+ + A++ R A D + LYA D P V + I +S +APA Sbjct: 176 DVQLRKFDSKTQQFQAFKDGRVAALADDNTYLYAWA--KDNPGYTVGIKTIGDESTIAPA 233 Query: 230 IIQGDTEWYNIVSW 243 + +G+ + Sbjct: 234 VKKGNKSLLEWTNK 247 >gi|163759017|ref|ZP_02166103.1| probable amino acid ABC transporter, substrate-binding protein [Hoeflea phototrophica DFL-43] gi|162283421|gb|EDQ33706.1| probable amino acid ABC transporter, substrate-binding protein [Hoeflea phototrophica DFL-43] Length = 262 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 100/255 (39%), Gaps = 10/255 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L L + + L DI + G +K GI F + A G+++G+D Sbjct: 1 MLNKLRTATLALCVATVGFAGAAHAELSDILEAGTIKIGIPESFPPFGSLGAEGEYEGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + D I+ +P+ +K+R L++ ++D++ + R + F Sbjct: 61 VDVAKLIAEDLGID---IELVPVTSKQRIPFLETDRVDLIISSMGANPERAK--SIWFSS 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G ISS++ L+G + V G+ ++ L + I F Sbjct: 116 AYAPFFSGAFASTDMAISSMADLAGKKVGVTGGSLEDIELTENSPE---GTEIIRFGDNA 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +AY + + D + A +++ D P + II +SP + +G+ + Sbjct: 173 ATLSAYVSGQVDVLVTGNT--VAAQVSADNPDLSMETKFIIKESPAFIGVKKGNVDLLQW 230 Query: 241 VSWTHYAMVTAEELG 255 V+ +L Sbjct: 231 VNVFILHKKLGGQLN 245 >gi|312958352|ref|ZP_07772873.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] gi|311287416|gb|EFQ65976.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] Length = 264 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 83/245 (33%), Gaps = 11/245 (4%) Query: 2 YKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + V L L + + + LG+IKK G +K G+ F+ V +G GF+ Sbjct: 7 RRTLLVGTLGLALGAGWLGQAVAGEQLGNIKKAGEIKIGLEGTYPPFSFVDESGKLSGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ AL+ + ++ AL+SK++D + + R+ + Sbjct: 67 VELSEALAKELGVK---VKLQATPWDGILAALESKRLDAVVNQVTISEERKKKYDFSKPY 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + I + L+G + V GT E L D + K + Sbjct: 124 TVSGIQALVLKKNVDTIKTADDLAGKKVGVGLGTNYEQWLKD----NQPKAIIKTYNDDP 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + R DA D A + + D S+ A+ +G+ E + Sbjct: 180 TKFQDLKVGRIDAILIDRLAALEY---AKKAPDTAAAGDAFSRQESGIALRKGEPELLDA 236 Query: 241 VSWTH 245 V+ Sbjct: 237 VNKAL 241 >gi|256844635|ref|ZP_05550120.1| glutamine ABC transporter [Lactobacillus crispatus 125-2-CHN] gi|256613176|gb|EEU18380.1| glutamine ABC transporter [Lactobacillus crispatus 125-2-CHN] Length = 272 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 89/250 (35%), Gaps = 14/250 (5%) Query: 1 MYKDFFV--SILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M K F + SI+ L L + N ++ +K + G+ F + G Sbjct: 1 MRKKFLLIISIVVLFALPLSGCKQNKKQNVYQAVKTSKTINWGVKADTPLFGSINIKTGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GF++D AL+ + +K ++ A + L++ +D + T R+ Sbjct: 61 LNGFEIDLANALTHEMLGKNAKANFITTTANTKIQLLKNTNVDAVIAAMTITPERKK--Q 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + GQ ++ I + L+ + V GTT + + Sbjct: 119 VEFSHPYFPAGQSIMVADSSAIKNAKNLNNKKVLVVKGTTAADAIHQVAPKA----EILQ 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + AA +A + DA+ D L S + ++ + P A+ +G Sbjct: 175 FDDYGQAFAALKAGQGDAFVTDNGILAG---ILRDSSGYKLVGGTFTNQPYGIAVNKGQN 231 Query: 236 EWYNIVSWTH 245 + ++ Sbjct: 232 DMLKHINTAL 241 >gi|167824254|ref|ZP_02455725.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 9] gi|226196401|ref|ZP_03791983.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pakistan 9] gi|225931618|gb|EEH27623.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pakistan 9] Length = 271 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 92/253 (36%), Gaps = 11/253 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M F + L + L + +A L DI+K G L+ F V G Sbjct: 1 MKFKPFATWLLGLSLVAAHAAAHADRLDDIRKAGVLRVATFDSNPPFGFVDPRTNRIVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+ +AL+ + ++ P N R L S ++D++ N T R + F Sbjct: 61 DVDYAQALADRLGVK---LKLQPTNPANRIPFLTSGKVDLVLANFTITDERAK--QVDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F+ K + S QL+ I GTT E+TL + + + ++ Sbjct: 116 VPYFASGQQFLAKKG-ALKSADQLNRLRIGADKGTTNEVTLREKYPQA----TIVAYDDT 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA RA A T D L L + + IS + +G+ Sbjct: 171 PFAFAALRAGNVQAITQDGPKLIGLLANVPDKQNYEVPAFSISNDYMGVGAPKGEPRLVA 230 Query: 240 IVSWTHYAMVTAE 252 V+ T + + Sbjct: 231 FVNETLTDLEASG 243 >gi|186474262|ref|YP_001861604.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184196594|gb|ACC74558.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 270 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 84/248 (33%), Gaps = 12/248 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 +++ F ++ + +L +K G L+ G+ F A+G+ +GFDVD Sbjct: 11 LRGAVIATAFSFVSASAHAQDLLETVKSSGVLRVGLEGTYPPFDYKNASGELEGFDVDVA 70 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 +A+++ + P Q++P LQ+ + D++ T R L F F Sbjct: 71 KAVAARLGVKP---QFVPTEWSGILAGLQAGKFDVIVNQVTITPQR--KQALDFSQPYTF 125 Query: 125 DGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 I +S+++ SG T D + + E Sbjct: 126 SAAQLIQRVDDKREFNSLAEFSGDKKLGVTLGTNY----DQMARTVSGINVQTYPGAPEK 181 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A R DA D L + T+ P + + + +G+ + ++ Sbjct: 182 LRDLSAGRIDATLDDRLMLPYIIKTSKLPLRAGDVVKGAEQE-MGIPFRKGNPGFEKAIN 240 Query: 243 WTHYAMVT 250 +M Sbjct: 241 DALSSMKQ 248 >gi|241765002|ref|ZP_04762998.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241365399|gb|EER60192.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 297 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 88/258 (34%), Gaps = 7/258 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + L L S + ++L + G L V F+ + G G+ Sbjct: 1 MKVRHWGLAWGLAALCGVSAVSAQTVLEKVSAGGALVIAHRESSVPFSYIDPKSGKPIGY 60 Query: 60 DVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +D C L+ ++ L + A R ++ + D+ +T R Sbjct: 61 AIDLCLRLADVVRKKTGMKDMPVEMLQVTAANRLAMVEQHKADLECGSTTNNAER--RQK 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 +AF Y G ++ I + L+G + GTT ++H M + Sbjct: 119 VAFTVPHYITGARLLVKASSSIDRLEDLAGKKLVSTKGTTPLKAAEQANRSHLMGITIVE 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E DA+ D LY L P+ ++ ++ PLA + + D Sbjct: 179 APDHERGVEMVEKGEADAFLMDDVLLYGLAAGRPHPAALKVVGRFVTTEPLAIVLPKNDP 238 Query: 236 EWYNIVSWTHYAMVTAEE 253 E+ +V ++T+ E Sbjct: 239 EFKKLVDDEMRRLITSRE 256 >gi|238759568|ref|ZP_04620730.1| Extracellular solute-binding protein, family 3 [Yersinia aldovae ATCC 35236] gi|238702227|gb|EEP94782.1| Extracellular solute-binding protein, family 3 [Yersinia aldovae ATCC 35236] Length = 284 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 51/230 (22%), Positives = 86/230 (37%), Gaps = 13/230 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK 77 S + +A L DIK+ G ++ + F + G+DVD A++ + Sbjct: 24 SGAAHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDIANAIAQDLGVK--- 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ N R L SK++D+++ N T R + F + GQ FI HK + Sbjct: 81 VELRATNPANRIPLLISKKVDLIAANFTITDDRAK--EVNFSLPYFATGQKFIAHKG-VL 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + I GT E+TL +++ I ++ A R A T D Sbjct: 138 KTPEDIGKLRIGADKGTVQEITLREHYPTAK----VISYDDTPVAFTALRNGNVQAITQD 193 Query: 198 ISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + L L + I P I+K I +G+ V+ T Sbjct: 194 DAKLVGLLGNLPAAQKADFEISPFSITKEYQGVGIPKGEDRLTTQVNETL 243 >gi|222153139|ref|YP_002562316.1| amino acid ABC transporter extracellular amino acid-binding protein [Streptococcus uberis 0140J] gi|222113952|emb|CAR42208.1| putative amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus uberis 0140J] Length = 277 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 79/252 (31%), Gaps = 12/252 (4%) Query: 2 YKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K ++ LF + + KK + G + V +G Sbjct: 4 KKILLTTLALASTLFLVACGKSSAAKTDQWDTYKKEKSITLGFDNTFVPMGFKDESGKNT 63 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDV+ +A+ K+++ P+N + L++ +ID++ T R+ +A Sbjct: 64 GFDVELAKAVFQEYG---IKVKFQPINWDLKETELKNGKIDMIWNGYSVTKERQA--KVA 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHPI 174 F + Q + K I+S + + G + Q+G++ K Sbjct: 119 FSTPYMKNEQVLVTKKSSNITSFAAMKGKVLGAQSGSSGYDAFTSNPKVLKDIVKDKDAT 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +E + + R D D + + I+ A + + D Sbjct: 179 QYETFTQAFIDLKNDRIDGLLIDKVYANYYLKQEGELTNYNIVKSEFDGEDFAVGVRKED 238 Query: 235 TEWYNIVSWTHY 246 ++ Sbjct: 239 KTLLKNINSAFT 250 >gi|223932262|ref|ZP_03624265.1| extracellular solute-binding protein family 3 [Streptococcus suis 89/1591] gi|223898943|gb|EEF65301.1| extracellular solute-binding protein family 3 [Streptococcus suis 89/1591] Length = 266 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 90/262 (34%), Gaps = 16/262 (6%) Query: 1 MYKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55 M K ++ L L + S+ + S L IK++G L + F V + Sbjct: 1 MKKILALAATVLAGLTLVACSSTSSQSALDKIKEKGTLVVATSPDYAPFEFQALVDGKNE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G D+ + ++ + ++ ++ ++Q+ + DI ++ R Sbjct: 61 VVGADIMLAQKIADELGVK---LEVSAMSFDNVLSSVQNGKADIAIAGLSYSEERAKV-- 115 Query: 116 LAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F Y ++ K ++S+ +SG ++ VQ G+T E + N Sbjct: 116 FDFSESYYQISDVLLIKKDSDNSLTSIDAMSGKTLAVQKGSTQESYAQENISQAN----L 171 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + E ++ + DA D N + + I ++ A+ +G Sbjct: 172 ISLTLMGEAVNELKSGKVDAILMDSPVAAGYVSQNSDLAVASVEFPTIDENSKVIALPKG 231 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 TE + + + E Sbjct: 232 STELKTAIDKVIAEVKASGEFD 253 >gi|121593035|ref|YP_984931.1| extracellular solute-binding protein [Acidovorax sp. JS42] gi|120605115|gb|ABM40855.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax sp. JS42] Length = 296 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 87/257 (33%), Gaps = 7/257 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + ++ + L + +L ++ G L V F+ V G G+ +D Sbjct: 4 KQGWKALGAAVALCCAVGAQAQGVLERVRGGGPLVLAHRESSVPFSYVHE-GKPMGYALD 62 Query: 63 FCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C ++ +Q + + R +++ + D+ +T R + F Sbjct: 63 LCLHIAEVVRKKTGMKNMPVQLVQVTPANRIEMVKTGKADMECGSTTNNAERRKDVA--F 120 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G ++ ++ + L G + GTT + M+ + Sbjct: 121 TIPHFITGARLLVPAASSVTRMEDLEGKKLVSTKGTTPYKAAEQANRERLMRIQLVEAPD 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + DA+ D LY L P ++ ++ PLA + + D E+ Sbjct: 181 HEAAVVMVEKGQADAFVMDDVLLYGLAANRPDPKALKVVGRFVTTEPLAIMLAKNDPEFK 240 Query: 239 NIVSWTHYAMVTAEELG 255 +V ++ + E+ Sbjct: 241 KLVDEEMRRLIVSNEIN 257 >gi|220913267|ref|YP_002488576.1| extracellular solute-binding protein family 3 [Arthrobacter chlorophenolicus A6] gi|219860145|gb|ACL40487.1| extracellular solute-binding protein family 3 [Arthrobacter chlorophenolicus A6] Length = 295 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 82/235 (34%), Gaps = 9/235 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + + + G +K G F +V +G GFDV+ + +++ + KI++ Sbjct: 46 AAGTTMEKLSSAGTIKIGTKFDQPLFGQVGLDGKPVGFDVEIGKLIAAKLGIAADKIEWS 105 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSV 140 + R ++ ++D++ R ++F Y GQ +++K I Sbjct: 106 ETVSANREPFIEQGKVDLVIATYTINDKR--KQVVSFAGPYYEAGQALMVNKDNDSIKKP 163 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + G +C G+T T+ D + A + R + +A T D Sbjct: 164 EDVKGKKVCSVTGSTPAATIVDKYGA-----ELVPAATYSACLEPLRNKQVEAVTTDNVI 218 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L + + +K P + + D E+ N ++ A + Sbjct: 219 LAGFVDKEPDA-FKLASDETFTKEPYGIGLKKDDAEFRNWINDQLEAFEKDGDYK 272 >gi|157884161|pdb|2V25|A Chain A, Structure Of The Campylobacter Jejuni Antigen Peb1a, An Aspartate And Glutamate Receptor With Bound Aspartate gi|157884162|pdb|2V25|B Chain B, Structure Of The Campylobacter Jejuni Antigen Peb1a, An Aspartate And Glutamate Receptor With Bound Aspartate Length = 232 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 58/220 (26%), Positives = 90/220 (40%), Gaps = 8/220 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L IK +G L G+ + +A + A G+ KGF+VD + L+ +I D KI+ + + Sbjct: 1 GKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDDKKIKLVAV 60 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 NAK R L + +D + T R+ F Y D G ++ K+K S++ + Sbjct: 61 NAKTRGPLLDNGSVDAVIATFTITPERKRI--YNFSEPYYQDAIGLLVLKEKKYKSLADM 118 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 GA+I V TT+ + + K + F I AA A R DA++ D S L Sbjct: 119 KGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFSVDKSILLG 178 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 ILPD + D + V Sbjct: 179 YVDDKS-----EILPDSFEPQSYGIVTKKDDPAFAKYVDD 213 >gi|73542273|ref|YP_296793.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72119686|gb|AAZ61949.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 270 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 75/246 (30%), Gaps = 14/246 (5%) Query: 3 KDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + L ++ + A +L +K+ G LK G+ F + GFDV Sbjct: 10 KSLLAASLIAGAAGLSATAASAADLLDTVKQAGVLKIGLEGTYPPFGFRNPKNELDGFDV 69 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D RA+++ + P ++ LQ+ + D++ T R+ L F Sbjct: 70 DVARAVAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVSVTPQRK--QVLDFSTP 124 Query: 122 TYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I K +S+ L G + V G+ + Sbjct: 125 YVYSAAQLIQRKDDKREFNSLEALKGHKLGVSLGSNYNE-----LAKSVPGIDVKTYPGA 179 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A R DA D + + + + +A + + ++ Sbjct: 180 PEYLRDLAAQRVDAALNDR-LMVNYLIKTANLPLRPGAVVAGANAEVAIPFRKDNPKFAQ 238 Query: 240 IVSWTH 245 + Sbjct: 239 AIDHAL 244 >gi|225854142|ref|YP_002735654.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae JJA] gi|225722741|gb|ACO18594.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae JJA] Length = 254 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 11/241 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q D+ T R+ F Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQGDMDIATFTITDERKKL--YNFTSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K +K+ + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + +TE+ + + Sbjct: 176 AHRIDAFSVDRSILSGYTSKRT-----ALLDDSFKPSDYGIVTKKSNTEFNDYLDNLVTK 230 Query: 248 M 248 Sbjct: 231 W 231 >gi|308185786|ref|YP_003929917.1| ABC transport system, periplasmic protein precursor [Pantoea vagans C9-1] gi|308056296|gb|ADO08468.1| putative ABC transport system, periplasmic protein precursor [Pantoea vagans C9-1] Length = 261 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 95/245 (38%), Gaps = 11/245 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ +L + S A L +I+KRG ++ + F V + +G+D Sbjct: 1 MKK-VLMAVATAALLMAQTGSALADQLQNIQKRGVIRVAVPQDFPPFGSVGTDLQPQGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + L+ + K+Q +P+++ R LQ+ ++D++ + RE + F Sbjct: 60 IDTAKYLAKQM---KLKLQLVPVSSANRVPYLQTDKVDLVISSMGKNAEREKV--IDFTR 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G K I + S LSG SI V G ++ L++ +E Sbjct: 115 AYAPFFLGVFGPKGDEIKAASALSGKSIGVTRGAVEDMVLSEVAPK---DAQVKRYEDNN 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +AY + + + A+ P++ + ++ SP + + + Sbjct: 172 TTLSAYLSGQVQYVATGNLVVAAIARQ--NPAKAPVAQFMLKDSPCYIGLKKDEPALKAK 229 Query: 241 VSWTH 245 V+ Sbjct: 230 VNELI 234 >gi|238893281|ref|YP_002918015.1| cysteine transport system periplasmic binding component [Klebsiella pneumoniae NTUH-K2044] gi|238545597|dbj|BAH61948.1| cysteine transport system periplasmic binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 283 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 89/235 (37%), Gaps = 11/235 (4%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKI 78 A L DIK G +K F V A G+DVDF +AL+ A+ + Sbjct: 33 SQAQADQLADIKAAGVVKVATFDANPPFGSVDAKTHHIVGYDVDFAQALAKALGVK---L 89 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + N R LQS + D++ + T R + + F + GQ F++ Sbjct: 90 ELVATNPANRIPLLQSGKADLIVADITITPER--AQVIDFSTPYFVTGQQFLVPAGSP-D 146 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + S A I GTT E L F + ++ + A R A T D Sbjct: 147 KLDEYSKARIGAVKGTTGEQALHQRFPQA----RVLSYDDIPLALTALRNGNVQAITQDS 202 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + L L ++ ILPD++SK + + +G+ V+ + E Sbjct: 203 TILAGLLAEAPDKAKFKILPDLLSKEEIGVGVKKGEPALLKAVNDELVKLEKTGE 257 >gi|119713445|gb|ABL97506.1| extracellular solute-binding protein family 3 [uncultured marine bacterium HOT0_02H05] Length = 299 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 102/256 (39%), Gaps = 11/256 (4%) Query: 1 MYKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F + L L++ + + IL I++ G + G FA + G+W G+ Sbjct: 1 MKKKFVLFALTLLLTATSQNAVWAGEILERIRQTGVITAGTRKDATPFAYINEKGEWVGY 60 Query: 60 DVDFCRAL---SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D + P +++ + + + RF +++K+IDI ++ +T R+ + Sbjct: 61 SIDILEIIRQNVEKELGKPIRLKLVEVTPQNRFNKVKNKEIDIECASSTFTWERDKI--I 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G + K + ++ L+G I V TT E + A + Sbjct: 119 DFSVSYFASGTKIMRKKGSSLGTIDSLAGRRIGVIPNTTNEQAIKIQQPAA----IIVPI 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235 + E + +A GD L AL+L N+ ++P+ A I + ++ Sbjct: 175 KNRIEGLEKLKKGEIEAIAGDGIVLQALQLENNNGDRFEVVPEFPYVYEAYACMIPEDES 234 Query: 236 EWYNIVSWTHYAMVTA 251 W +V+++ + Sbjct: 235 AWRGMVNYSLVKFMEG 250 >gi|328886196|emb|CCA59435.1| Glutamate-binding protein of ABC transporter system [Streptomyces venezuelae ATCC 10712] Length = 305 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 47/227 (20%), Positives = 83/227 (36%), Gaps = 10/227 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++S KKRG L G E G + GFD++ + +++++ DP+ I + Sbjct: 53 DSSTWNRAKKRGHLVVGAKEDQPYMGERDPATGRYSGFDIEIAKMMAASLGFDPAGISFR 112 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + + R ALQ+ QID R+ +G F Y GQ ++ I Sbjct: 113 TIASANRETALQNGQIDYYVGTYTINDNRKKLVG--FAGPYYLAGQSLLVRTDENDIHGP 170 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G +C AG+T + + + ++ ++ DA T D + Sbjct: 171 QDLAGKRVCSAAGSTPYQRIQKDYPKA----ELVAYDTYSACVDNLLTYQVDAVTTDDTI 226 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 L P E ++ SK P + + D + A Sbjct: 227 LMGYAAKV--PDELKVVGKPFSKEPYGIGVPRNDNALRFALDDALAA 271 >gi|241664890|ref|YP_002983250.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|240866917|gb|ACS64578.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 302 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 86/237 (36%), Gaps = 8/237 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS- 76 + + L I+ G + G + F+ + G+ +D C L ++ P Sbjct: 29 AAASPTLDRIRDSGTVHVGYREDSIPFSYLDGT-KPVGYAIDICSRLIDSLRTSLKRPDL 87 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K+QY+P+ A R + + + D+ +T E +AF Y ++ Sbjct: 88 KVQYVPVTAANRLDVIATGKADLECGST--NNSPERRQKVAFTIPHYITKGRMLVKANSP 145 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I L+G ++ V A +T LA M + + A R A+ G Sbjct: 146 IQQWEDLNGKTV-VAARGSTNADLARKLNETGMTMQVVDANDLRSAFAMLTDGRAQAFAG 204 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 D L ++ P+++ + S A + + D E+ ++ + ++ E Sbjct: 205 DDILLSGMRAMAKNPADYRLAGKTQLVSSYAIMLSKQDPEFKKLIDQSMTRLIVDGE 261 >gi|313900555|ref|ZP_07834048.1| ABC transporter, substrate-binding protein, family 3 [Clostridium sp. HGF2] gi|312954617|gb|EFR36292.1| ABC transporter, substrate-binding protein, family 3 [Clostridium sp. HGF2] Length = 272 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 77/217 (35%), Gaps = 8/217 (3%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + L GI+ +G GFDV+ A+S I +++ ++ + Sbjct: 45 DKEVLTIGIDDTFAPMGFK-KDGKLVGFDVELAEAVSKKIGKK---VEFQNIDWDLKETE 100 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 L+S ID++ T R+ + F + Q I K GI + + + ++ VQ Sbjct: 101 LESGNIDLIWNGYSITEERKK--QVLFSDPYMENRQIIITTDKTGIKTKADIKDKTLSVQ 158 Query: 152 AGTTTELTL--ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 ++ + F A P F+ + + R DA D + D Sbjct: 159 KNSSAYDAVMKDKDFVAGLKDGKPTQFDTNNDCFMDLESGRSDAIVVDETLARYYMKQQD 218 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 +V+L + K A + + DTE ++ Sbjct: 219 NGVNYVVLDENFGKEEYAIGMRKDDTELCKHINKAMQ 255 >gi|118586387|ref|ZP_01543836.1| glutamine ABC transporter, glutamine-binding protein [Oenococcus oeni ATCC BAA-1163] gi|118433174|gb|EAV39891.1| glutamine ABC transporter, glutamine-binding protein [Oenococcus oeni ATCC BAA-1163] Length = 287 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 91/255 (35%), Gaps = 15/255 (5%) Query: 4 DFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58 ++ ++ ++ + N S +K+ G ++ G+ F + G +G Sbjct: 15 IILTLLIIFGVVSASALAENNSKHVDTWERVKRLGKIRWGVKADTKLFGLMDTKTGQPEG 74 Query: 59 FDVDFCRALSSAIFDD---PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 FDVD +AL+ + P + + + + R L++ ID T RE Sbjct: 75 FDVDIAKALTVQLSKQSGVPMQADFTIVTSNTRIQLLKNANIDGFIATATITPEREKV-- 132 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + GQ ++ K GI S+ L+ + + + + K K + Sbjct: 133 IDFSNSYFKAGQSILVKKGSGIKSIKDLNNSKSTIIGVVGSNSVI--NVKKFAPKAKVLA 190 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + AA +A + A T D LY L + P + ++ + P A Sbjct: 191 LGDYGQAMAALKAGQGQALTTDNGILYGLAT--ENPG-YTVVGGTFTSEPYGVAFDNNQP 247 Query: 236 EWYNIVSWTHYAMVT 250 E + A++ Sbjct: 248 EMVKQTNKALKAIIA 262 >gi|330962036|gb|EGH62296.1| cystine transporter subunit [Pseudomonas syringae pv. maculicola str. ES4326] Length = 265 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 78/245 (31%), Gaps = 10/245 (4%) Query: 2 YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S L L++ + L IK+ G L G+ F+ V G GF+ Sbjct: 7 RRTFLFSALSLMLGSGIAGQAMAGEQLQKIKESGTLNVGLEGTYPPFSFVDEKGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ AL+ + AL SK++D++ + R+ + Sbjct: 67 VELSEALAKELGVKAKVQPSK---WDGILAALDSKRLDVVINQVTISDERKKKYDFSQPY 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + I S L+G + V GT E L K + +E Sbjct: 124 TVSGIQALVLKKNADAIKSAQDLTGKKVGVGLGTNYEQWL----KENVPGAVVKTYEDDP 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 R DA D L AL++ + S+ A+ +G+ E Sbjct: 180 TKIQDLSVGRIDAILVDR--LAALEIAAKTKGKLAPAGAAFSRQASGIALRKGEPELQAA 237 Query: 241 VSWTH 245 ++ Sbjct: 238 INQAL 242 >gi|300311472|ref|YP_003775564.1| amino acid ABC transporter/signal transduction system periplasmic protein/domain-containing protein [Herbaspirillum seropedicae SmR1] gi|167731101|emb|CAP19663.1| periplasmic component protein [Herbaspirillum seropedicae] gi|300074257|gb|ADJ63656.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Herbaspirillum seropedicae SmR1] Length = 267 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 83/254 (32%), Gaps = 16/254 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFD 60 K + ++ + +L + + A +L +K G LK + F G+ GF+ Sbjct: 5 IKQWLLAGVGAALLASSLSVSAADLLQSVKSSGTLKVALEGNYPPFNFKDPKTGELTGFE 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + L++ + P + L + + D++ T R+ F Sbjct: 65 VDVAKLLAAKLGVKP---VFTTTEWSGILAGLGAGKYDVIINQVGITDERQK--AFDFSD 119 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I+ K + S+ L G + + GT E + Sbjct: 120 PYTLSSAQLIVRKDEKREFKSLEDLKGKKLGLGQGTNFEQKAKAV-----PGIDVRTYPG 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E A A R DA + S L L + P I + + +G+ E+ Sbjct: 175 SPEYLADLAAGRIDA-ALNDSLLVGYILKSTNLPLKAGSP-IGAVDKIGIPFRKGNPEFK 232 Query: 239 NIVSWTHYAMVTAE 252 ++ A + A+ Sbjct: 233 AALNKAL-ADIKAD 245 >gi|329927214|ref|ZP_08281512.1| ABC transporter, substrate-binding protein, family 3 [Paenibacillus sp. HGF5] gi|328938614|gb|EGG34997.1| ABC transporter, substrate-binding protein, family 3 [Paenibacillus sp. HGF5] Length = 256 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 89/251 (35%), Gaps = 19/251 (7%) Query: 1 MYKDF---FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + L+ + S S + L GI+ + + Sbjct: 1 MVKKIASVLAGFMLLLTVVGCSSSASGG--------NELVVGIDDKFAPMGFRDESNEIV 52 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D+ RA + + + +++ P++ K + L S +ID++ T R+ + Sbjct: 53 GFDIDYARAAAEKMGKE---VKFQPIDWKAKESELSSGRIDLIWNGYTITDERKE--KVL 107 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + Q + I+++ L+G + +Q+ ++ L+ +K + F Sbjct: 108 FTKPYLENSQVVAVLNDSDIATIGDLAGKQVGLQSLSSAADALSANAIHEQVK-NISEFP 166 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R DA D + + + IL + ++ + +G+ E Sbjct: 167 DNVLALSDLKNGRVDAVIIDEVVMKYYMSKEE--GTYKILEESLAPEQYGIGVKKGNEEL 224 Query: 238 YNIVSWTHYAM 248 + M Sbjct: 225 LESLQKALDDM 235 >gi|288936965|ref|YP_003441024.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|330005632|ref|ZP_08305310.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella sp. MS 92-3] gi|288891674|gb|ADC59992.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|328536198|gb|EGF62579.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella sp. MS 92-3] Length = 279 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 90/250 (36%), Gaps = 13/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + ++ L S + A +L DI RG LKC + + + F+ G Sbjct: 1 MKLKRNAGLALVLTLVAVSGAARADMLADIHARGELKCAVYSDVPPFSAPDPKTRQLVGM 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ C AL+ + + + + R + + + D+L N +T R + F Sbjct: 61 DVELCHALAKQMGVKAQLVP---TSVEARIAIIATGRADVLIANLAYTKTRGRQIQ--FS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + ++ + +++ G I GTT+E ++ P+ F+ Sbjct: 116 DPYYVAKEMLLVKEANADKTLADFKGKRISATKGTTSEQSIV------LKGGKPVTFQDA 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 A ++ + + + ++ + ++ P+ + QG+ + Sbjct: 170 ASAFLALEQNKVLGFVTNTMTGIKMIGQAKKDGINLAMIKEPMALEPIGVGMKQGEPQLL 229 Query: 239 NIVSWTHYAM 248 V+ + M Sbjct: 230 ASVNESLKVM 239 >gi|87121142|ref|ZP_01077033.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Marinomonas sp. MED121] gi|86163634|gb|EAQ64908.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Marinomonas sp. MED121] Length = 267 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 92/248 (37%), Gaps = 10/248 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +S + + ++ F+S + +A L DIK +G L + + G+ G + Sbjct: 1 MKKITTISSILISLIGFSSVT-HADDLADIKAKGTLVVAVKADYKPYGYRNDQGEIVGLE 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + ++ +P + R L ++D+L R L Sbjct: 60 IDLAQNVAERLG---VSLELVPAQSSNRMQFLIDGKVDLLIATMSDKPER-RELVYIADQ 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G I K +S L+G +C G F A + F E Sbjct: 116 AYYSSGSNIIAKKSSQYTSWGDLNGQKVCGIKGAFYNQETETTFGA-----TIVPFGSSE 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E AA + +C+A+ D S + ++ + I+ +P A+ G+ ++ Sbjct: 171 ESLAALKQGKCNAFVYDDSFIAGKLNDPQWSQDYEMPLPTINDNPWGLAVRLGEDNFHAF 230 Query: 241 VSWTHYAM 248 ++ T Sbjct: 231 MNSTIIDW 238 >gi|283785107|ref|YP_003364972.1| putative periplasmic solute-binding protein of ABC transporter [Citrobacter rodentium ICC168] gi|282948561|emb|CBG88152.1| putative periplasmic solute-binding protein of ABC transporter [Citrobacter rodentium ICC168] Length = 272 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 91/246 (36%), Gaps = 12/246 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M K + ++ T + A L DIK G LK F V G+ Sbjct: 4 MKKSPL-AFGVMLAAALTVTAAQADQLADIKAAGVLKVATFDANPPFGSVDPKTHQIVGY 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVDF AL+ ++ ++ + N R LQS + D++ + T R + F Sbjct: 63 DVDFANALAQSLGVK---LELVATNPANRIPLLQSGKADLIVADITITPERARV--IDFS 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ F++ + + S A I GTT E L F + + ++ + Sbjct: 118 VPYFVTGQQFLVPATSP-DKLEEYSRARIGAVKGTTGEQALHQRFP----QSRVLAYDDI 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R A T D + L L + ILPD++SK + + +G+ Sbjct: 173 PLAFTALRNGNVQAITQDSTILAGLLGGAPDKANFKILPDLLSKEEIGVGVKKGEPALLK 232 Query: 240 IVSWTH 245 V+ Sbjct: 233 AVNDEL 238 >gi|115351507|ref|YP_773346.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115281495|gb|ABI87012.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 264 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 83/251 (33%), Gaps = 17/251 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +L ++ + + A +L +K+RG L+ G+ F G+ Sbjct: 1 MKISLLKKLLVAGLIGTSFAAATAHAADLLDQVKQRGTLRVGLEGTFPPFNAKNPQGELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + ++ LQ+ + D+++ T R+ + L Sbjct: 61 GFDVDIAKAVAAKLGVKAE---FVTTEWSGIIAGLQAGKFDVIANQVGITDKRKET--LD 115 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F P + I K S+ L G + V GT Sbjct: 116 FSPAYTYSSAQLIQRKDDTRQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKT 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E A R DA D L L + P ++ S +P +G+ Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFRKGNP 228 Query: 236 EWYNIVSWTHY 246 ++ + Sbjct: 229 KFQKAIDDAMT 239 >gi|257459775|ref|ZP_05624884.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257443200|gb|EEV18334.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 269 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 56/240 (23%), Positives = 108/240 (45%), Gaps = 10/240 (4%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L I+F A L I+ G +K G+ G F+ + +G+++GF+++ A++ Sbjct: 3 LLFCIIFTLCSGVFAGSLEQIRSAGVVKIGVRDGRPPFS-DEKSGNFEGFEINLADAIAK 61 Query: 70 AIFDDP-SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +IF D +++++PLNA +R ALQ+ ++D+ T+ ++ + F + G Sbjct: 62 SIFGDKRGRVEFVPLNASDRISALQNDKVDLAVA--TITITQDRKRQIDFSYPYFSMSLG 119 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + K GI S+ LS + V+ TT K HN I E + Sbjct: 120 VLTRKSDGIKSIDDLSNKKVLVEGNGTTAENFLYKNKIHN----LIHCSITTECYDMLKQ 175 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + DAY D + A + +D V + ++ + L + +G+TE ++++ A+ Sbjct: 176 GKADAYVNDNLIVLAYSIIDDNLE--VAIQNLGNPEFLGIGVRKGNTELLDLINKELVAL 233 >gi|67923258|ref|ZP_00516743.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] gi|67854884|gb|EAM50158.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] Length = 300 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 102/256 (39%), Gaps = 11/256 (4%) Query: 1 MYKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F + L L++ + + IL I++ G + G FA + G+W G+ Sbjct: 2 MKKKFVLFALTLLLTATSQNAVWAGEILERIRQTGVITAGTRKDATPFAYINEKGEWVGY 61 Query: 60 DVDFCRAL---SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D + P +++ + + + RF +++K+IDI ++ +T R+ + Sbjct: 62 SIDILEIIRQNVEKELGKPIRLKLVEVTPQNRFNKVKNKEIDIECASSTFTWERDKI--I 119 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G + K + ++ L+G I V TT E + A + Sbjct: 120 DFSVSYFASGTKIMRKKGSSLGTIDSLAGRRIGVIPNTTNEQAIKIQQPAA----IIVPI 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDT 235 + E + +A GD L AL+L N+ ++P+ A I + ++ Sbjct: 176 KNRIEGLEKLKKGEIEAIAGDGIVLQALQLENNNGDRFEVVPEFPYVYEAYACMIPEDES 235 Query: 236 EWYNIVSWTHYAMVTA 251 W +V+++ + Sbjct: 236 AWRGMVNYSLVKFMEG 251 >gi|315650943|ref|ZP_07903983.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium saburreum DSM 3986] gi|315486789|gb|EFU77131.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium saburreum DSM 3986] Length = 279 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 42/275 (15%), Positives = 81/275 (29%), Gaps = 23/275 (8%) Query: 1 MYKDFFVSILCLIILFFTSFS-------TNASILGDIKKRG---------FLKCGINTGL 44 M K + +L ++L S + + + G G + Sbjct: 1 MKKIYLFGVLAALMLAGCSTAKTTESTSASQETSKTASESGKAADADNKNTFTVGFDQDF 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 V +G + GFD+D ++ + + I+Y P+ + + L S ID + Sbjct: 61 PPMGFVGDDGQFTGFDLDLAAEVAKRLGKE---IKYQPIAWDAKDMELSSGTIDCIWNGF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 + + + Q F++ I S+ L+G + VQA ++ E L Sbjct: 118 SIQGREDK---YTWSKPYMKNDQVFVVKSGSNIDSIEDLAGKKVEVQADSSAEAALKADP 174 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 DA D S + ++T S +L ++ Sbjct: 175 DMVKTFDSLQTVADYNTGFMDLDMGGVDAIAMD-SVVANYQITKRGGSGFTVLDTPLASE 233 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 G+ + V M L + Sbjct: 234 EYGIGFKLGNESLRDEVQAKLDEMKADGSLKTISE 268 >gi|160936778|ref|ZP_02084144.1| hypothetical protein CLOBOL_01668 [Clostridium bolteae ATCC BAA-613] gi|158440270|gb|EDP18016.1| hypothetical protein CLOBOL_01668 [Clostridium bolteae ATCC BAA-613] Length = 324 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 87/285 (30%), Gaps = 48/285 (16%) Query: 1 MYKDFFVSILCLIILFFTSF------------------STNASILGDIKKR--------- 33 M K F L ++ + T A + Sbjct: 22 MKKRLFSLALASVMALSLAGCGGSKEAATEAETKAETEQTAADTSAKAEDTTAQEETKAE 81 Query: 34 -------------GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 G L G + + NG++ GFD++ + ++ + + + Sbjct: 82 SEAASEAVSESAGGTLIVGFDQDFPPMGFMGDNGEYTGFDLELAKEVAERLGLEYTA--- 138 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P+ + + L++ ID + T + + + Q F++ K GI+S Sbjct: 139 QPIAWDSKDMELEAGNIDCIWNGFTMTGRED---DYTWSEPYMANTQVFVVAKDSGIASQ 195 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+G + Q ++ E L + + DA D Sbjct: 196 ADLAGKIVECQVDSSAEAALKEVPDLTATFKQLLTTADYNSAFMDLEQGAVDAIAMD--V 253 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + A R ++ +IL D +S +G+TE + V T Sbjct: 254 IVAGYQIQQRNADFIILEDSLSAEEYGVGFKKGNTELRDKVQATL 298 >gi|295693562|ref|YP_003602172.1| amino acid ABC transporter, amino acid-binding protein [Lactobacillus crispatus ST1] gi|295031668|emb|CBL51147.1| Amino acid ABC transporter, amino acid-binding protein [Lactobacillus crispatus ST1] Length = 271 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 85/251 (33%), Gaps = 12/251 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K L +I+ S I + + G++ V K NG Sbjct: 1 MKKWILGIALAIILFLTGCQSVQKEANTQDTWNKIASKKQVVIGLDDSFVPMGFEKKNGQ 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+D+D +A+ K+ + ++ L++ ID+L T R+ Sbjct: 61 LTGYDIDLAKAVFRQYG---IKVSFQTVDWSMNVTELRNGTIDLLWNGYSITPERKK--K 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 +AF + Q ++ K GI S Q+ + +Q G+T E + K ++ Sbjct: 116 VAFSKPYLRNRQVLVVKKDSGIRSFKQMKQYELGMQTGSTAEQWYETKQDVLHAKKT-VL 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGD 234 ++ + A R D + SE+ ++ D + A + +GD Sbjct: 175 YDTISNSFLDLNAGRIQGILLDEVYADYYIAHMAKSSEYKVIQNDRVPMDLFAVGMRKGD 234 Query: 235 TEWYNIVSWTH 245 V+ Sbjct: 235 KTLRKRVNEGL 245 >gi|302874467|ref|YP_003843100.1| extracellular solute-binding protein family 3 [Clostridium cellulovorans 743B] gi|307690926|ref|ZP_07633372.1| extracellular solute-binding protein family 3 [Clostridium cellulovorans 743B] gi|302577324|gb|ADL51336.1| extracellular solute-binding protein family 3 [Clostridium cellulovorans 743B] Length = 261 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 81/250 (32%), Gaps = 15/250 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K + + + + + ++L +K+ LK G+ +G N Sbjct: 1 MKKKLLLLATAVFCVAGIATGCKSKETTNVLDKVKEAKVLKVGLESGFAPLEYKDENDKL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD A+ + ++++ +L+ DI+ + T R+ + Sbjct: 61 VGFDVDLANAIGDKLGVK---VEFVDTAFDTITQSLKKNDFDIIIAGLNITEERKK--EI 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F GQ I+ + + TT L A+ + + Sbjct: 116 DFTEPYIMSGQSIIVQSSNKEITSEEGLKGKKVGVGKGTTSLEFAEGMSGLG---EIVEY 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E V + R DA D + + + + + K P+ A+ +G TE Sbjct: 173 EDVPSELMDLKIGRIDAVIVDE--VVGDFYVAKDKTAYKKV-VALGKEPMGIAVDKGQTE 229 Query: 237 WYNIVSWTHY 246 + V + Sbjct: 230 LLDAVQKAYN 239 >gi|331266481|ref|YP_004326111.1| ABC transporter substrate binding lipoprotein-amino acid transport [Streptococcus oralis Uo5] gi|326683153|emb|CBZ00771.1| ABC transporter substrate binding lipoprotein-amino acid transport [Streptococcus oralis Uo5] Length = 279 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 90/254 (35%), Gaps = 14/254 (5%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + +L L F T+ + AS +K+G + G + V + NG Sbjct: 1 MKRKKIALVLALFFSFFLTACTQKASDPNQDNWAKYQKQGSITIGFDNTFVPMGFEEKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D +A+S + KI++ P++ + LQ+ ID + T R+ Sbjct: 61 QYAGFDIDLAQAVSEKLG---IKIKFQPIDWDMKETELQNGTIDAIWNGYTATDERKE-- 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKY 171 +AF + Q + K + I S+ ++ + QAG++ L + K Sbjct: 116 KVAFTIPYMENQQVLVSKKSQNIHSIQAMTDKVLGAQAGSSGYLNFEGQPELLKNRVKDQ 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ E + R DA D + +++ + A + Sbjct: 176 KANQYQSFNEALIDLKNDRIDALLIDRVYANYYLQSEGILNDYNVFSAGFESEAFAVGVR 235 Query: 232 QGDTEWYNIVSWTH 245 D ++ Sbjct: 236 PADKTLLAALNQAL 249 >gi|121602131|ref|YP_988959.1| putative glutamate/aspartate ABC transporter, permease protein/periplasmic glutamate/aspartate-binding protein [Bartonella bacilliformis KC583] gi|120614308|gb|ABM44909.1| putative glutamate/aspartate ABC transporter, permease protein/periplasmic glutamate/aspartate-binding protein [Bartonella bacilliformis KC583] Length = 460 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 97/243 (39%), Gaps = 6/243 (2%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---F 72 + L IK+ G + G+ G A NG + GF + + + I Sbjct: 175 LTSVAHAQNDTLERIKQTGRITLGVRESS-GLAYALGNGRYTGFHTEMAENIINDISKKI 233 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 P +I+YLP+ ++ R LQ+ D +T R +AF TY + + Sbjct: 234 GKPIRIRYLPITSQNRIPLLQNNTYDFECGSTTNDTARGR--SVAFAYTTYVEEVRIAVK 291 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K GI S+ L+G +I GTT + +A N+ + I + + R D Sbjct: 292 KDSGIKSIQDLNGKTIATTTGTTAVQLIRQNGRAKNINFRVINGRDHADSFLLLESGRAD 351 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A+ D S L + PS+++IL ++S P+A + D + ++ + + + Sbjct: 352 AFIMDSSILAGSISRSRNPSDYMILDAVLSVEPIACMLRLEDKNFEQAINDSIVSQIKDG 411 Query: 253 ELG 255 L Sbjct: 412 SLE 414 >gi|225868655|ref|YP_002744603.1| amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus equi subsp. zooepidemicus] gi|225701931|emb|CAW99453.1| putative amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus equi subsp. zooepidemicus] Length = 278 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 35/255 (13%), Positives = 81/255 (31%), Gaps = 13/255 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTN-----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K V++ + + + K++ + G + V +G Sbjct: 4 KKTLLVALFAATATLLVACGASNKQTSSDAWNSYKEKKTITLGFDNTFVPMGYKDESGKN 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD++ +A+ K++Y +N + L + +ID++ T R+ + Sbjct: 64 TGFDIELAKAVFDQYG---IKVKYQAINWDLKETELNNGKIDLIWNGYSVTKERQA--KV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHP 173 AF + + Q + K ISS + + ++ Q+G++ + K Sbjct: 119 AFTELYMKNEQVLVTQKSSQISSFADMKNKTLGAQSGSSGYDAFTSHPKVLKDLVKGNDA 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +E + + R D D + I+ A + + Sbjct: 179 TQYETFTQAFIDLKNKRIDGLLIDRVYANYYLQQEGELDRYNIIASEFEGEDFAVGVRKA 238 Query: 234 DTEWYNIVSWTHYAM 248 D ++ ++ Sbjct: 239 DKTLQKKITQALKSL 253 >gi|159905111|ref|YP_001548773.1| extracellular solute-binding protein [Methanococcus maripaludis C6] gi|159886604|gb|ABX01541.1| extracellular solute-binding protein family 3 [Methanococcus maripaludis C6] Length = 260 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 88/246 (35%), Gaps = 11/246 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGD-IKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K + ++ ++ F AS G L G + F E A+G+ GFD Sbjct: 5 KKLILLGLVVSLVAFSGCTEDQASAKSSMTMTEGILVVGTDPTFPPFEEKNADGELVGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + IQ++ AL++++ D + T R + F Sbjct: 65 IDLMKALGEKMGIE---IQFVEQPFDGIIPALKAEKFDCIISAVTITDDRAKEVA--FTN 119 Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ + SV L+G + Q GTT E Y + +E + Sbjct: 120 SYFDAAQVIAVLVDDDSVQSVDDLAGKVVAAQLGTTGEYEAQHYAEELGF--EIKSYEVM 177 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R +A D A + + +P + ++ + ++ A + E + Sbjct: 178 ADAFIDMENGRVNAVVTDD--GVAQRFLDTKPGVYKVVGEPMTAESYGLAANLDNQELID 235 Query: 240 IVSWTH 245 ++ Sbjct: 236 AINAAL 241 >gi|330819483|ref|YP_004348345.1| extracellular solute-binding protein family 3 [Burkholderia gladioli BSR3] gi|327371478|gb|AEA62833.1| extracellular solute-binding protein family 3 [Burkholderia gladioli BSR3] Length = 257 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 92/252 (36%), Gaps = 17/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++LC+ L T + A + L + V G GFD Sbjct: 1 MK---LKALLCVASLGMTLLTAIAPGTASAQASSVLNVATDATFPPMEFVD-KGQRTGFD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL+ A+ ++Q+ ++ K L +++ D T R + + F Sbjct: 57 IDIMNALAKAMGK---QVQWTDIDFKGLVPGLVARRFDAAISGIYITPER--AQVVDFTQ 111 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + G ++ I +++ L+G + VQ GT + L D + + + E+ + Sbjct: 112 SYFAGGLSVLVKADSPIKTLADLNGKKVSVQVGTKSVNFLRD----NYPQVQRVEVEKNQ 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E+ R DA A Y T +L ++ A+ + +++ + Sbjct: 168 EMFDLVGIGRADAAVTGKPAAYQFARTRPG---FRVLDKELTTEAYGIAVRKDESQLRDQ 224 Query: 241 VSWTHYAMVTAE 252 ++ A + A+ Sbjct: 225 MNAAL-AKIKAD 235 >gi|300715445|ref|YP_003740248.1| Cysteine transport protein [Erwinia billingiae Eb661] gi|299061281|emb|CAX58390.1| Cysteine transport protein [Erwinia billingiae Eb661] Length = 261 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 87/247 (35%), Gaps = 15/247 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ ++ A L DI+KRG L+ + F V + +G+D Sbjct: 1 MKKALL-AMVGAALMLTQVTQAMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + L+ + K+Q +P+ + R LQ+ ++D++ + RE + F Sbjct: 60 IDMAKYLAKQM---KLKLQLVPVTSANRVPYLQTDKVDLVISSMGKNPEREKVIA--FSR 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G K + + LSG +I V G ++ L D +E Sbjct: 115 AYAPFFLGVFGPKDAQLKDAAALSGKTIGVTRGAVEDMVLTDVAPK---DTQLKRYEDNN 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 +AY + + + A+ N P +L D P + + + Sbjct: 172 TTLSAYLSGQVQYVATGNLVVAAIARQNADKAPVAKFMLKDS----PCFIGMRKDEPALK 227 Query: 239 NIVSWTH 245 V Sbjct: 228 TKVDALI 234 >gi|238750309|ref|ZP_04611811.1| Extracellular solute-binding protein, family 3 [Yersinia rohdei ATCC 43380] gi|238711542|gb|EEQ03758.1| Extracellular solute-binding protein, family 3 [Yersinia rohdei ATCC 43380] Length = 284 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 57/310 (18%), Positives = 100/310 (32%), Gaps = 65/310 (20%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK 77 S + +A L DIK+ G ++ + F + G+DVD A++ + Sbjct: 24 SGTAHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLGVK--- 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ N R L +K++D+++ N T R + F + GQ FI HK + Sbjct: 81 VELRATNPANRIPLLTAKKVDLIAANFTITDERAK--EVNFSLPYFATGQKFIAHKG-VL 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + I GT E+TL +++ I ++ A R A T D Sbjct: 138 KTPEDIGKLRIGADKGTVQEITLREHYPTAK----VISYDDTPLAFTALRNGNVQAITQD 193 Query: 198 ISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L L + I P I+K I +G+ V+ T Sbjct: 194 DAKLVGLLGNLPEAQKADFEISPFSITKEYQGVGIAKGEDRLTASVNET----------- 242 Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 + ++K + ++DR G Sbjct: 243 --------------------LVKLEKDGEAAK---------------------IYDRWFG 261 Query: 316 NQSELKIPRG 325 + PRG Sbjct: 262 PATNAAQPRG 271 >gi|237751561|ref|ZP_04582041.1| glutamine ABC transporter [Helicobacter bilis ATCC 43879] gi|229372927|gb|EEO23318.1| glutamine ABC transporter [Helicobacter bilis ATCC 43879] Length = 284 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 24/255 (9%) Query: 2 YKDFFVSILCLII-----LFFTSFS--------TNASILGDIKKRGFLKCGINTGLVGFA 48 +K F S L++ L + S + IK G ++ G+ + F Sbjct: 5 FKGIFRSSAALVLGGAIMLGLLACGDSKQEETKKQESAIETIKNNGKIRIGVFSDKPPFG 64 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 N ++KGFDV + + + D +KI+++P+ A R AL++ ++DI+ N T Sbjct: 65 YY-ENNEYKGFDVYIAKRFAKDLLGDENKIEFVPVEAAARASALKANKVDIIMANFTKTP 123 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 RE + F G + K I+S QL G ++ V GTT AD + + Sbjct: 124 EREK--QVDFAKPYMKVTLGVVS-KDGAITSEEQLQGKTLIVNKGTT-----ADIYFSKQ 175 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + + FE+ E A++ + DA + D + LYA P V + I + +AP Sbjct: 176 SGINLLKFEQNTETFQAFQQGKGDALSHDSTMLYAW--VKHNPDYKVGIQSIGEQDVIAP 233 Query: 229 AIIQGDTEWYNIVSW 243 A+ QG+ E + ++ Sbjct: 234 AVKQGNKELLDWLNT 248 >gi|148543614|ref|YP_001270984.1| extracellular solute-binding protein [Lactobacillus reuteri DSM 20016] gi|184153022|ref|YP_001841363.1| amino acid ABC transporter substrate binding component [Lactobacillus reuteri JCM 1112] gi|227363423|ref|ZP_03847547.1| hypothetical protein HMPREF0535_0385 [Lactobacillus reuteri MM2-3] gi|325681968|ref|ZP_08161486.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM4-1A] gi|148530648|gb|ABQ82647.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus reuteri DSM 20016] gi|183224366|dbj|BAG24883.1| amino acid ABC transporter substrate binding component [Lactobacillus reuteri JCM 1112] gi|227071523|gb|EEI09822.1| hypothetical protein HMPREF0535_0385 [Lactobacillus reuteri MM2-3] gi|324978612|gb|EGC15561.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM4-1A] Length = 294 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 80/229 (34%), Gaps = 9/229 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + IKKRG L G++ V K NG G+DVD RA++ + + Sbjct: 34 ANHTDTWERIKKRGTLLIGVDDTFVPMDFRKKNGQLVGYDVDLSRAVAKVLGLKAD---F 90 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 ++ + L++ ID + T R+ + F + GQ ++ K I + Sbjct: 91 QSIDWSMKETELKNGTIDCIWNGYTATPSRQKRIA--FSRVYELSGQSLVVRKNSKIKNF 148 Query: 141 SQLSGASICVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + G + +Q +T + Y K PI+++ +A R Sbjct: 149 KDMKGKVLGIQESSTAQTDFDKYPQVLKRLVKGQKPILYQDNSSAFMDLQAGRTQGVLAG 208 Query: 198 ISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + ++ +A + +GD N +++ Sbjct: 209 TVYAGYYATHIANNNNYKLISASAYPADRVAIGMRKGDRTLINKINYAL 257 >gi|163793471|ref|ZP_02187446.1| extracellular solute-binding protein, family 3 [alpha proteobacterium BAL199] gi|159181273|gb|EDP65788.1| extracellular solute-binding protein, family 3 [alpha proteobacterium BAL199] Length = 304 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 91/245 (37%), Gaps = 9/245 (3%) Query: 6 FVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + + +S + A S L + RG L+ G + + G G Sbjct: 26 LGTAVVAGAVLGSSKAAQATVDSSKSKLQQVLSRGVLRVGTGSTNPPWHFEDDTGKLVGM 85 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D R ++ ++FDDP+K++++ + R +L + ++D++ + T R + Sbjct: 86 DIDMARLIAKSLFDDPTKVEFVIQGSDARIPSLITDKVDVICQWMTITAGRAQQVEFT-V 144 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 P +M L A V+ G + + ++ + F+ Sbjct: 145 PYYREGVGLLVMADNPKYKKFDDLMMAGDSVKVGAMQNVFIEEWIHKGLPQAKVDQFDSP 204 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A A R DAY GD SA+ L P + + A A+ GD W N Sbjct: 205 DTTLQALNAGRVDAYLGDQSAIRWLMNQF--PGRYADSGYGWLPNSYASAVRPGDPVWLN 262 Query: 240 IVSWT 244 V+ Sbjct: 263 WVNTV 267 >gi|330984782|gb|EGH82885.1| cystine transporter subunit [Pseudomonas syringae pv. lachrymans str. M301315] Length = 265 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 79/245 (32%), Gaps = 10/245 (4%) Query: 2 YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S L L+++ + L IK G L G+ F+ V NG GF+ Sbjct: 7 RRTFLFSALSLMLVTGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + + P AL SK++D++ + R+ + Sbjct: 67 VEFSEALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISEERKKKYDFSEPY 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + I + L+G + V GT E L K + ++ Sbjct: 124 TVSGIQALVLKKNADTIKTAKDLTGKKVGVGLGTNYEQWL----KENVPGAIVKTYDDDP 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 R DA D A + V D S+ A+ +G+ E Sbjct: 180 SKIQDLSVGRIDAILVDRLAALEMATKTKNK--LVPAGDAFSRQESGIALRKGEPELQAA 237 Query: 241 VSWTH 245 + Sbjct: 238 IDKAI 242 >gi|153946989|ref|YP_001403107.1| polar amino acid ABC transporter periplasmic amino acid-binding protein [Yersinia pseudotuberculosis IP 31758] gi|152958484|gb|ABS45945.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pseudotuberculosis IP 31758] Length = 284 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 50/230 (21%), Positives = 85/230 (36%), Gaps = 13/230 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK 77 S + A L DIK+ G ++ + F + G+DVD A++ + Sbjct: 24 SGTAYADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLGVK--- 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ N R L SK++D+++ N T R + F + GQ FI K + Sbjct: 81 VELRATNPANRIPLLASKKVDLIAANFTITDERAK--EVNFSLPYFATGQKFIARKG-VL 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + I GT E+TL +++ I ++ A R A T D Sbjct: 138 KTPEDIGKLRIGADKGTVQEITLREHYPTAK----VISYDDTPLAFTALRNGNVQAITQD 193 Query: 198 ISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + L L + I P I+K I +G+ +V+ T Sbjct: 194 DAKLVGLLGNIPEAQKADFEISPFSITKEYQGVGIPKGEDRLTAVVNETL 243 >gi|332077039|gb|EGI87501.1| major cell-binding factor [Streptococcus pneumoniae GA17545] Length = 254 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 98/241 (40%), Gaps = 11/241 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ F Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K +K+ + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + + +TE + + Sbjct: 176 AHRIDAFSVDHSILSGYTSKRT-----ALLDDSFKPSDYSIVTKKSNTELNDYLDNLVTK 230 Query: 248 M 248 Sbjct: 231 W 231 >gi|238787850|ref|ZP_04631647.1| Extracellular solute-binding protein, family 3 [Yersinia frederiksenii ATCC 33641] gi|238724193|gb|EEQ15836.1| Extracellular solute-binding protein, family 3 [Yersinia frederiksenii ATCC 33641] Length = 284 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 57/310 (18%), Positives = 101/310 (32%), Gaps = 65/310 (20%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSK 77 S + +A L DIK+ G ++ + F + + G+DVD A++ + Sbjct: 24 SGAVHADKLDDIKQAGVVRIAVFDSNPPFGYIDPQSKKLVGYDVDVANAIAKDLGVK--- 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ N R L +K++D+++ N T R + F + GQ FI HK + Sbjct: 81 VELRATNPANRIPLLTAKKVDLIAANFTITDERAK--EVNFSLPYFATGQKFIAHKG-VL 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + I GT E+TL +++ I ++ A R A T D Sbjct: 138 KTPEDIGKLRIGADKGTVQEITLREHYPTAK----VISYDDTPLAFTALRNGNVQAITQD 193 Query: 198 ISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L L + I P I+K I +G+ V+ T Sbjct: 194 DAKLVGLLGNLPEAQKADFEISPFSITKEYQGVGIPKGEDRLTASVNET----------- 242 Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 + ++K + ++DR G Sbjct: 243 --------------------LVKLEKDGEAAK---------------------IYDRWFG 261 Query: 316 NQSELKIPRG 325 + PRG Sbjct: 262 PATNAAQPRG 271 >gi|312864748|ref|ZP_07724979.1| major cell-binding factor [Streptococcus downei F0415] gi|311099875|gb|EFQ58088.1| major cell-binding factor [Streptococcus downei F0415] Length = 273 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 96/235 (40%), Gaps = 15/235 (6%) Query: 16 FFTSFSTNASIL----GDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSA 70 + + + L IK G LK G+ + F + + G ++D + ++ Sbjct: 23 GLPAQAAGQAKLPAQVQKIKDAGVLKVGVKQDVPNFGYYDSKNDKYTGMEIDLAKKIADT 82 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + +QY + A+ R L + Q DI+ R+ + + Y+D GF+ Sbjct: 83 LGVK---VQYTAVTAQTREALLDNGQTDIMIATYTINDQRKANFSI--SNPYYYDEIGFL 137 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 ++K GI++ L G +I V G+ T+ +L + + +K+ + E+ A RA+R Sbjct: 138 VNKDSGINNPKDLDGKTIGVAQGSKTKASLETFASDNGIKFKYVQLGSYPELVTALRAYR 197 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 DA++ D S L N++ IL A + +++ V+ Sbjct: 198 VDAFSVDKSILTGYVSKNNK-----ILDQGFDTMEYGIASKKSNSQVTEYVNSLL 247 >gi|260888234|ref|ZP_05899497.1| putative cysteine ABC transporter, periplasmic cysteine-binding protein [Selenomonas sputigena ATCC 35185] gi|260862068|gb|EEX76568.1| putative cysteine ABC transporter, periplasmic cysteine-binding protein [Selenomonas sputigena ATCC 35185] Length = 285 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 79/249 (31%), Gaps = 14/249 (5%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKG 58 M K + + L+ + + L+ G N F NG ++G Sbjct: 27 MKMKKMLLGAVGLLAAASFAVAGCGGSGDSGSASKTLRVGTNADFAPFEFQGENGKEYEG 86 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D RA++ + +N AL SK IDI R+ + F Sbjct: 87 FDMDLARAVAEEMG---MTADIQNINFDGLIPALVSKNIDIAISGMTINDERKK--NVLF 141 Query: 119 RPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G ++ K I+ L+G ++ VQ GTT+ + N Sbjct: 142 SEPYYQSGLTIVVKKDNTDINGFKDLAGKTVAVQIGTTSAKEV-----KKNPDIQVKELN 196 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + +A A D + + ++ ++++ A+ + + E Sbjct: 197 SSADTFLELKAGGVQAVVNDRPVNDYYIAKSGE-KDVRVVNELLTSEDYGIAMAKDNQEL 255 Query: 238 YNIVSWTHY 246 V Sbjct: 256 QKKVDEALK 264 >gi|188532628|ref|YP_001906425.1| Probable ABC transporter, periplasmic-binding protein [Erwinia tasmaniensis Et1/99] gi|188027670|emb|CAO95521.1| Probable ABC transporter, periplasmic-binding protein [Erwinia tasmaniensis Et1/99] Length = 280 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 55/227 (24%), Positives = 95/227 (41%), Gaps = 11/227 (4%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKI 78 F+ +A L DIKK G +K F V A + G+DVDF +AL+ + + Sbjct: 30 FAAHADRLADIKKAGVVKVATFDANPPFGSVDAKTHEIVGYDVDFAKALAKTLGVK---L 86 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Q +P N R LQS + D++ + T R + F + GQ F++ Sbjct: 87 QLVPTNPANRIPLLQSGKADLIVADITITPERAKV--IDFSVPYFVTGQQFLVP-VSSPD 143 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + A I GTT E L + F + + +E + +A R A T D Sbjct: 144 KLDGYATARIGAVKGTTGEQELHNRFP----QSRVLSYEDIPLALSALRNGNVQAITQDS 199 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + L L +++ +LP+++SK + + +G+ +V+ Sbjct: 200 TILAGLLDGAPDKAKYKVLPELLSKEEIGVGVKKGEASLLKVVNDEL 246 >gi|22127993|ref|NP_671416.1| solute-binding periplasmic protein precursor for ABC transporter [Yersinia pestis KIM 10] gi|45443741|ref|NP_995280.1| putative periplasmic solute-binding protein [Yersinia pestis biovar Microtus str. 91001] gi|51598241|ref|YP_072432.1| ABC transporter, periplasmic amino acid binding protein [Yersinia pseudotuberculosis IP 32953] gi|108814128|ref|YP_649895.1| periplasmic solute-binding protein [Yersinia pestis Nepal516] gi|145601162|ref|YP_001165238.1| periplasmic solute-binding protein [Yersinia pestis Pestoides F] gi|150260955|ref|ZP_01917683.1| putative periplasmic solute-binding protein [Yersinia pestis CA88-4125] gi|162421777|ref|YP_001608461.1| polar amino acid ABC transporter periplasmic amino acid-binding protein [Yersinia pestis Angola] gi|165926129|ref|ZP_02221961.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939968|ref|ZP_02228505.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|166009662|ref|ZP_02230560.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166213331|ref|ZP_02239366.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167422854|ref|ZP_02314607.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425515|ref|ZP_02317268.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468126|ref|ZP_02332830.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis FV-1] gi|170026441|ref|YP_001722946.1| extracellular solute-binding protein [Yersinia pseudotuberculosis YPIII] gi|186897480|ref|YP_001874592.1| extracellular solute-binding protein [Yersinia pseudotuberculosis PB1/+] gi|218931087|ref|YP_002348962.1| putative periplasmic solute-binding protein [Yersinia pestis CO92] gi|229839819|ref|ZP_04459978.1| putative periplasmic solute-binding protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841904|ref|ZP_04462060.1| putative periplasmic solute-binding protein [Yersinia pestis biovar Orientalis str. India 195] gi|229896781|ref|ZP_04511944.1| putative periplasmic solute-binding protein [Yersinia pestis Pestoides A] gi|229904669|ref|ZP_04519780.1| putative periplasmic solute-binding protein [Yersinia pestis Nepal516] gi|270488380|ref|ZP_06205454.1| bacterial extracellular solute-binding protein, family 3 [Yersinia pestis KIM D27] gi|294505634|ref|YP_003569696.1| putative periplasmic solute-binding protein [Yersinia pestis Z176003] gi|21961140|gb|AAM87667.1|AE014014_1 putative solute-binding periplasmic protein precursor for ABC transporter [Yersinia pestis KIM 10] gi|45438611|gb|AAS64157.1| putative periplasmic solute-binding protein [Yersinia pestis biovar Microtus str. 91001] gi|51591523|emb|CAH23195.1| ABC transporter, periplasmic amino acid binding protein [Yersinia pseudotuberculosis IP 32953] gi|108777776|gb|ABG20295.1| periplasmic solute-binding protein [Yersinia pestis Nepal516] gi|115349698|emb|CAL22679.1| putative periplasmic solute-binding protein [Yersinia pestis CO92] gi|145212858|gb|ABP42265.1| periplasmic solute-binding protein [Yersinia pestis Pestoides F] gi|149290363|gb|EDM40440.1| putative periplasmic solute-binding protein [Yersinia pestis CA88-4125] gi|162354592|gb|ABX88540.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis Angola] gi|165912094|gb|EDR30734.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|165921989|gb|EDR39166.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165991584|gb|EDR43885.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166205629|gb|EDR50109.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166958246|gb|EDR55267.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167055529|gb|EDR65322.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752975|gb|ACA70493.1| extracellular solute-binding protein family 3 [Yersinia pseudotuberculosis YPIII] gi|186700506|gb|ACC91135.1| extracellular solute-binding protein family 3 [Yersinia pseudotuberculosis PB1/+] gi|229678787|gb|EEO74892.1| putative periplasmic solute-binding protein [Yersinia pestis Nepal516] gi|229691243|gb|EEO83296.1| putative periplasmic solute-binding protein [Yersinia pestis biovar Orientalis str. India 195] gi|229696185|gb|EEO86232.1| putative periplasmic solute-binding protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700219|gb|EEO88255.1| putative periplasmic solute-binding protein [Yersinia pestis Pestoides A] gi|262363799|gb|ACY60520.1| putative periplasmic solute-binding protein [Yersinia pestis D106004] gi|262367735|gb|ACY64292.1| putative periplasmic solute-binding protein [Yersinia pestis D182038] gi|270336884|gb|EFA47661.1| bacterial extracellular solute-binding protein, family 3 [Yersinia pestis KIM D27] gi|294356093|gb|ADE66434.1| putative periplasmic solute-binding protein [Yersinia pestis Z176003] gi|320017443|gb|ADW01015.1| putative periplasmic solute-binding protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 284 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 57/310 (18%), Positives = 102/310 (32%), Gaps = 65/310 (20%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSK 77 S + A L DIK+ G ++ + F + G+DVD A++ + Sbjct: 24 SGTAYADKLDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLGVK--- 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ N R L SK++D+++ N T R + F + GQ FI K + Sbjct: 81 VELRATNPANRIPLLASKKVDLIAANFTITDERAK--EVNFSLPYFATGQKFIARKG-VL 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + I GT E+TL +++ I ++ A R A T D Sbjct: 138 KTPEDIGKLRIGADKGTVQEITLREHYPTAK----VISYDDTPLAFTALRNGNVQAITQD 193 Query: 198 ISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L L + I P I+K I +G+ +V+ T Sbjct: 194 DAKLVGLLGNIPEAQKADFEISPFSITKEYQGVGIPKGEDRLTAVVNET----------- 242 Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 + ++K + ++ ++DR G Sbjct: 243 --------------------LIKLEKEGD--------------AVK-------IYDRWFG 261 Query: 316 NQSELKIPRG 325 ++ PRG Sbjct: 262 PETNSAQPRG 271 >gi|309811005|ref|ZP_07704803.1| putative ABC transporter glutamine-binding protein GlnH [Dermacoccus sp. Ellin185] gi|308434969|gb|EFP58803.1| putative ABC transporter glutamine-binding protein GlnH [Dermacoccus sp. Ellin185] Length = 273 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 95/255 (37%), Gaps = 8/255 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + + L T+ + +K GI G + D+KG D Sbjct: 1 MKRAIATAGVAALALGLTACGGSDDKSSS-GSGDKIKIGIKYDQPGLGLKAGS-DYKGLD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + KI ++ +K+R L++ + ++ T R+ ++F Sbjct: 59 VDVAKYVAKEMGYGEDKIDFVESPSKQREKMLEAGTVKMIFATYSITDKRK--QQVSFGG 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + GQ + I SV L+G +C G+T+ L K P +++ Sbjct: 117 PYFVAGQSVLTKADSDIKSVKDLAGKKVCSVTGSTSVDNL----KKQQPNLVPQQYDKYS 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A + DA T D + L + + ++ D ++ + +GD + Sbjct: 173 ECADALASGAIDAMTTDNTILAGYANQDAYKGKFKLVGDAFTEEKYGVGLKKGDKDTCEK 232 Query: 241 VSWTHYAMVTAEELG 255 V+ MV + E Sbjct: 233 VNKAITKMVDSGEWK 247 >gi|290891212|ref|ZP_06554274.1| hypothetical protein AWRIB429_1664 [Oenococcus oeni AWRIB429] gi|290479176|gb|EFD87838.1| hypothetical protein AWRIB429_1664 [Oenococcus oeni AWRIB429] Length = 287 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 91/255 (35%), Gaps = 15/255 (5%) Query: 4 DFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58 ++ ++ ++ + N S +K+ G ++ G+ F + G +G Sbjct: 15 IILTLLIIFGVVSASALAENNSKHVDTWERVKRLGKIRWGVKADTKLFGLMDTKTGQPEG 74 Query: 59 FDVDFCRALSSAIFDD---PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 FDVD +AL+ + P + + + + R L++ ID T RE Sbjct: 75 FDVDIAKALTVQLSKQSGVPMQADFTIVTSNTRIQLLKNANIDGFIATATITPEREKV-- 132 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + GQ ++ K GI S+ L+ + + + + K K + Sbjct: 133 IDFSNSYFKAGQSILVKKGSGIKSIKDLNNSKSTIIGVVGSNSVI--NVKKFAPKAKVLA 190 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + AA +A + A T D LY L + P + ++ + P A Sbjct: 191 LGDYGQAMAALKAGQGQALTTDNGILYGLAT--ENPG-YTVVGGTFTSEPYGVAFDNNQP 247 Query: 236 EWYNIVSWTHYAMVT 250 E + A++ Sbjct: 248 EMVKQTNKALKAIIA 262 >gi|171317513|ref|ZP_02906703.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171097342|gb|EDT42187.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 264 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 87/257 (33%), Gaps = 18/257 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +L ++ + + A +L +K+RG L+ G+ F G+ Sbjct: 1 MKISLLKKLLVAGLIGTSFAAATAHAADLLDQVKQRGTLRVGLEGTFPPFNSKNPQGELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + ++ LQ+ + D++S T R+ + L Sbjct: 61 GFDVDIAKAVAAKLGVKAE---FVTTEWSGIIAGLQAGKFDVISNQVGITDKRKET--LD 115 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F P + I K S+ L G + V GT Sbjct: 116 FSPAYTYSSAQLIQRKDDTREFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKT 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E A R DA D L L + P ++ S +P +G+ Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNP 228 Query: 236 EWYNIVSWTHYAMVTAE 252 ++ + A + A+ Sbjct: 229 KFQKAIDDAM-AQLEAD 244 >gi|296392570|ref|YP_003657454.1| family 3 extracellular solute-binding protein [Segniliparus rotundus DSM 44985] gi|296179717|gb|ADG96623.1| extracellular solute-binding protein family 3 [Segniliparus rotundus DSM 44985] Length = 335 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 85/227 (37%), Gaps = 12/227 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + L I +RG L G++ G F+ A G KGFDV R ++ + DP+++ Y Sbjct: 78 HGGRLDRILQRGKLVVGLDQGTYPFSYRDSATGQMKGFDVAMAREIAQGMLGDPNRVDYR 137 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 +++ R AL++ +DI+ + R + F + Q + ++++ Sbjct: 138 IISSAGRTTALENDSVDIVIKTMSINCKR--MKEITFSEPYFETDQRVMAATNANATTLA 195 Query: 142 Q---LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L +++C G+T F + + A + DA + D Sbjct: 196 DRKILGESTVCAARGSTAVGHFHHLFPTAK----ILGTTTWADCLVAIQQGSVDAISSDE 251 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 S LY + L + + + +G+ E +V+ Sbjct: 252 SILYGFYDQDPNLYFLSALQ--LGREVYGVGMHKGEAELERVVNKII 296 >gi|116491605|ref|YP_811149.1| amino acid ABC transporter periplasmic protein [Oenococcus oeni PSU-1] gi|116092330|gb|ABJ57484.1| amino acid ABC transporter substrate-binding protein, PAAT family [Oenococcus oeni PSU-1] Length = 287 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 91/255 (35%), Gaps = 15/255 (5%) Query: 4 DFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58 ++ ++ ++ + N S +K+ G ++ G+ F + G +G Sbjct: 15 IILTLLIIFGVVSASALAENNSKHVDTWERVKRLGKIRWGVKADTKLFGLMDTKTGQPEG 74 Query: 59 FDVDFCRALSSAIFDD---PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 FDVD +AL+ + P + + + + R L++ ID T RE Sbjct: 75 FDVDIAKALTVQLSKQSGVPMQADFTIVTSNTRIQLLKNANIDGFIATATITPEREKV-- 132 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + GQ ++ K GI S+ L+ + + + + K K + Sbjct: 133 IDFSNSYFKAGQSILVKKGSGIKSIKDLNNSKSTIIGVVGSNSVI--NVKKFAPKAKVLA 190 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + AA +A + A T D LY L + P + ++ + P A Sbjct: 191 LGDYGQAMAALKAGQGQALTTDNGILYGLAT--ENPG-YTVVGGTFTSEPYGVAFDNNQP 247 Query: 236 EWYNIVSWTHYAMVT 250 E + A++ Sbjct: 248 EMVKQTNKALKAIIA 262 >gi|322373400|ref|ZP_08047936.1| polar amino acid uptake (PAAT) family ABC transporter, amino acid-binding protein [Streptococcus sp. C150] gi|321278442|gb|EFX55511.1| polar amino acid uptake (PAAT) family ABC transporter, amino acid-binding protein [Streptococcus sp. C150] Length = 266 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 79/251 (31%), Gaps = 14/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 M K F ++ L + + + IK+ L ++ F + Sbjct: 3 MKKLFLGAMALLATVTLVACGSKKDAYESIKENKKLVVAVSPDYAPFEFKTLIDGKDQVV 62 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D+ +A++ + ++ ++ +LQ+ + DI T R+ + Sbjct: 63 GSDIKLAQAIADELGVK---LEVTTMSFDNVLSSLQAGKADIAISGISVTAERKKT--FD 117 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K + SS+ G + VQ GT E K + Sbjct: 118 FSDPYYETQNAIIVRKDQAADYSSLDAFKGKKVAVQKGTIEEGLAKKQLK----DSTVVS 173 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E ++ + DA + N + + + A A+ +G+ Sbjct: 174 LTAMGEAINEVKSGQVDAVDLEKPVAEGYVAQNSDLTLASVALKVNDGDAKAVAMTKGND 233 Query: 236 EWYNIVSWTHY 246 + V+ Sbjct: 234 KLKKAVNKVIK 244 >gi|296269107|ref|YP_003651739.1| extracellular solute-binding protein family 3 [Thermobispora bispora DSM 43833] gi|296091894|gb|ADG87846.1| extracellular solute-binding protein family 3 [Thermobispora bispora DSM 43833] Length = 289 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 80/242 (33%), Gaps = 6/242 (2%) Query: 6 FVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 V++ L + A + K L GI G K +G + GFDVD Sbjct: 19 LVTLAALATSLTACGQSKADSIVDKAKNEKKLTIGIKIDQPGLGLRKPDGTYAGFDVDVA 78 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 R ++ + S I + + R +Q Q+D++ T R+ ++F Sbjct: 79 RYIAKELGVPESGITFKEAQSANREPFIQQGQVDMVIATYSITDERKE--KVSFAGPYLV 136 Query: 125 DGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 GQ ++ I+ V L +C G+ + LAD F + + Sbjct: 137 TGQDILIRADDDSITDVQSLKDKKVCGAQGSISPKRLADMFGPEWEAKNLTQQQGYGACL 196 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + DA + D + L P + ++ S + + D + ++ Sbjct: 197 PLLENKQVDAISTDATILAGFAAQF--PGKFKLVGKPFSTEKYGIGLKKDDKAGRDAINN 254 Query: 244 TH 245 Sbjct: 255 AL 256 >gi|116493032|ref|YP_804767.1| amino acid ABC transporter periplasmic protein [Pediococcus pentosaceus ATCC 25745] gi|116103182|gb|ABJ68325.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pediococcus pentosaceus ATCC 25745] Length = 273 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 94/269 (34%), Gaps = 19/269 (7%) Query: 1 MYKDFFVSILCLIILF----FTSFS-------TNASILGDIKKRGFLKCGINTGLVGFAE 49 M K+ + ++ + L S I+K + G++ V Sbjct: 1 MKKELKLFLVMALGLLIIPVLGGCGNSKKTTRAEPSSWETIQKNKKVVIGLDDSFVPMGF 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 + NG G+D+D RA+ K+ + ++ L+++ ID++ T Sbjct: 61 REKNGQLAGYDIDLARAVFRQYG---IKVDFQTIDWSMNVTELRNQTIDLIWNGLTITDE 117 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY---FKA 166 R+ L + Q ++ K GI+ ++ L S+ Q+G++ + D+ K Sbjct: 118 RQK--ALTLSEPYLTNQQIIVVKKSSGITKLADLKNKSVGAQSGSSGAQDIDDHPQILKN 175 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + PI+++ A+R D S++ I+ + Sbjct: 176 RIKNHDPILYDSFNNAFIDLNANRIQGLLIDSVYANYYIKHMSNSSDYRIIKSNMPSEQF 235 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A I +G+TE + + EL Sbjct: 236 AVGIKKGNTEVKQKIDQGINQLRADGELK 264 >gi|227820383|ref|YP_002824354.1| glutamine ABC transporter periplasmic protein [Sinorhizobium fredii NGR234] gi|227339382|gb|ACP23601.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Sinorhizobium fredii NGR234] Length = 261 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 86/253 (33%), Gaps = 10/253 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + FV++ + A LGDI RG ++ + F V + G+D+D Sbjct: 4 RRLFVAMTAMAAAIGFGSIAQADALGDITARGTIRVAVPQDFPPFGSVGPDMAPVGYDID 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 ++ + ++ +P+ + R LQ+ ++D++ + RE + F Sbjct: 64 MANLIAEKLGVK---VELVPVTSANRIPYLQTNKVDLVISSLGKNPDREKV--IDFTAAY 118 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G + +L+G +I V G +L L A +E Sbjct: 119 APFYNGVFAPADFVAAKPEELAGKTIGVTRGAVEDLELTKIAPA---DTVIKRYEDNNGT 175 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +A+ + + +A A+ P + L +I SP + + V+ Sbjct: 176 ISAFLSGQVEAVATGNVVAAAILA--KNPPKRPELKFLIKNSPCYIGLSKEQPALLEKVN 233 Query: 243 WTHYAMVTAEELG 255 A T L Sbjct: 234 GIIAAAKTDGSLN 246 >gi|227545108|ref|ZP_03975157.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri CF48-3A] gi|300909220|ref|ZP_07126681.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri SD2112] gi|68160911|gb|AAY86901.1| lr1730 [Lactobacillus reuteri] gi|227184896|gb|EEI64967.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri CF48-3A] gi|300893085|gb|EFK86444.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri SD2112] Length = 294 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 81/229 (35%), Gaps = 9/229 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + IKKRG L G++ V K NG G+DVD RA++ + + Sbjct: 34 ANYTDTWERIKKRGTLLIGVDDTFVPMDFRKKNGQLVGYDVDLSRAVAKVLGLKAD---F 90 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 ++ + L++ ID + T R+ + F + GQ ++ K I + Sbjct: 91 QSIDWSMKETELKNGTIDCIWNGYTATPSRQKRIA--FSRVYELSGQSLVVRKDSKIKNF 148 Query: 141 SQLSGASICVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + G ++ +Q +T + Y K PI+++ +A R Sbjct: 149 ADMKGKTLGIQESSTAQTDFDKYPQVLKKLVKGQKPILYQDNSSAFMDLQAGRTQGVLAG 208 Query: 198 ISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + ++ +A + +GD N +++ Sbjct: 209 TVYAGYYATHIANNNNYKLISASAYPADRVAIGMRKGDRTLINKINYAL 257 >gi|110800274|ref|YP_695974.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens ATCC 13124] gi|110674921|gb|ABG83908.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens ATCC 13124] Length = 262 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 93/245 (37%), Gaps = 9/245 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ I +IL ++ + K + GI+ V GD GFD Sbjct: 1 MKKLLFLLISI-VILSILISGCSSKKIETKKDSNTVIIGIDDTFVPMGFKNEKGDIVGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + K+ + P++ + L + ID++ T RE +AF Sbjct: 60 VDLSKEAFKRM---NLKVIFQPIDWSMKETELTNGNIDLIWNGYTMTHEREK--KVAFTN 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK--AHNMKYHPIVFER 178 + Q + I++++ L G ++ Q G+++ TL + K P++F+ Sbjct: 115 SYLKNRQVIVTLSNSNINTLNDLKGKTVTTQDGSSSLDTLFERPKLTKSFKNGEPVLFDS 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A R DA D L + + PS+ +L + + + + + + Sbjct: 175 FNDCFMDLEAGRSDAVVCDE-ILAQYYIFKNDPSKFHVLTEDLGEESYSIGLRKNSNLID 233 Query: 239 NIVSW 243 ++ Sbjct: 234 HLNKT 238 >gi|325964012|ref|YP_004241918.1| amino acid ABC transporter substrate-binding protein, PAAT family [Arthrobacter phenanthrenivorans Sphe3] gi|323470099|gb|ADX73784.1| amino acid ABC transporter substrate-binding protein, PAAT family [Arthrobacter phenanthrenivorans Sphe3] Length = 296 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 89/258 (34%), Gaps = 11/258 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + + + G +K G F +V +G GFDV+ + +++ + KI++ Sbjct: 47 AAGTTMEKLSSAGSIKIGTKFDQPLFGQVGLDGKPVGFDVEIGKLIAAELGIPADKIEWS 106 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSV 140 + R ++ ++D++ R + F Y GQ +++K I Sbjct: 107 ETVSANREPFIEQGKVDLVIATYTINDKR--KQVVDFAGPYYEAGQALMVNKDNDTIKKP 164 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + G +C G+T T+ D + A + R + +A T D Sbjct: 165 EDVKGKKVCSVTGSTPAATIVDKYGA-----ELVPAATYSACLEPLRNKQVEAVTTDNVI 219 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE--ELGITQ 258 L + + +K P + +GDTE+ N ++ E Sbjct: 220 LAGFVDKEPDA-FKLASDETFTKEPYGIGLKKGDTEFRNWINDQLEKFEENGSYEKAWEA 278 Query: 259 KNINQVSKDTTNPDVQRF 276 + + P++ R+ Sbjct: 279 TAGSVIKTAPKLPEIDRY 296 >gi|152965465|ref|YP_001361249.1| extracellular solute-binding protein family 3 [Kineococcus radiotolerans SRS30216] gi|151359982|gb|ABS02985.1| extracellular solute-binding protein family 3 [Kineococcus radiotolerans SRS30216] Length = 305 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 89/231 (38%), Gaps = 10/231 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQY 80 T + IK G + G+ G + A +G++ GFD++ + +++ + P +I + Sbjct: 56 TGSPTYDKIKAAGKVVIGVKADQPGIGQKDAGSGEYTGFDIEMAKLMAANLGLTPDEIDF 115 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISS 139 + + R LQ +D++ + R+ + F Y GQ ++ + I+ Sbjct: 116 VETVSANREPFLQQGTVDMVIASYTINDKRK--QVVDFAGPYYVAGQDLLVRADEEEITG 173 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G +C G+T + D + F+ + ++ DA T D + Sbjct: 174 PDALAGKKVCSVEGSTPATRIRDEHP----DAQLVTFDAYSKCVEQLTSNAVDAVTTDDA 229 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 L +P ++ S+ P + +GDT N ++ V Sbjct: 230 ILRGYAAQ--QPEALKVVGAPFSEEPYGIGLPKGDTALRNALNDAIETAVE 278 >gi|254302678|ref|ZP_04970036.1| ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322870|gb|EDK88120.1| ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 292 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 97/260 (37%), Gaps = 29/260 (11%) Query: 2 YKDFFVSILCLIILFFTSFS------------------TNASILGDIKKRGFLKCGINTG 43 K ++ + + + + A + +IK G ++ G+ T Sbjct: 5 KKILKLATVGVAVFALAACGNKTEETKPEAQAPAQETTAKARTVQEIKDSGVIRIGVFTD 64 Query: 44 LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F + NG +G+DV F L+ + ++Y+ L+ R ++ + DI++ N Sbjct: 65 KAPFGYIDENGKNQGYDVYFTDRLAKDLGVK---VEYISLDPASRVEYAETAKADIVAAN 121 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R + F G + K I S+ +L ++ V GTT E Sbjct: 122 FTVTPERAE--KVDFSLPYMKVSLGVVSPDKAVIKSIDELKDKTLIVSKGTTAEYY---- 175 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 F ++ + ++ + A R DA++ D + + A P V + + Sbjct: 176 FSKNHPEIKLQKYDSYADAYNALLDGRGDAFSTDNTEVLAWA--KANPGFTVGIDSLGDV 233 Query: 224 SPLAPAIIQGDTEWYNIVSW 243 +A A+ +G+ + + ++ Sbjct: 234 DTIAVAVQKGNKDLLDWINN 253 >gi|18310306|ref|NP_562240.1| amino acid ABC transporter [Clostridium perfringens str. 13] gi|18144986|dbj|BAB81030.1| probable amino acid ABC transporter [Clostridium perfringens str. 13] Length = 262 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 88/237 (37%), Gaps = 9/237 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ I +IL ++ + K + GI+ V GD GFD Sbjct: 1 MKKLLFLLISI-VILSILISGCSSKKIETKKDSNTVIIGIDDTFVPMGFKNEKGDIVGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + K+ + P++ + L + ID++ T RE +AF Sbjct: 60 VDLAKEAFKRM---NLKVIFQPIDWSMKETELTNGNIDLIWNGYTMTHEREK--KVAFTN 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY--FKAHNMKYHPIVFER 178 + Q + I++++ L G ++ Q G+++ TL + P++F+ Sbjct: 115 SYLKNRQVIVTLSNSNINTLNDLKGKTVTTQDGSSSLDTLFENPELTKSFKNGEPVLFDS 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + A R DA D N PS+ +L + + + + + + Sbjct: 175 FNDCFMDLEAGRSDAVVCDEILAQYYIFKNG-PSKFHVLTEDLGEESYSIGLRKNSN 230 >gi|330430186|gb|AEC21520.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pusillimonas sp. T7-7] Length = 270 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 78/256 (30%), Gaps = 19/256 (7%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDF 63 + + + + A ++ +K+RG L G+ F V G+ GFD+D Sbjct: 11 LVAGVTAVSAFTASGIAHAADLIDTVKERGTLIVGVEGTYPPFNYVDTKTGELDGFDIDV 70 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + ++ + +Q++ L S + D++ T R F Sbjct: 71 AKLIADKLGVK---VQFVKTEWSAILAGLTSGKFDVIVNQVGITPGR--QQTFDFSVPYV 125 Query: 124 FDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 I+ K +S + L G + V G+ E + E Sbjct: 126 ASSPQLILRKNDDAGYTSFADLKGKKLGVSQGSNYEA-----LAKSQEGVDVKSYPGAPE 180 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGDTEWYN 239 + + R DA D L T++ P + I P +G+ + Sbjct: 181 YLSDLISKRVDAALNDQLMTAYLVKTSNIPIK----GGAIVGEPKFNGIPFRKGNPGFEA 236 Query: 240 IVSWTHYAMVTAEELG 255 ++ + E Sbjct: 237 ALNKALQDSFDSGEFA 252 >gi|194290845|ref|YP_002006752.1| extracellular solute-binding protein, ABC transporter periplasmic protein [Cupriavidus taiwanensis LMG 19424] gi|193224680|emb|CAQ70691.1| Putative extracellular solute-binding protein, ABC transporter, periplasmic component [Cupriavidus taiwanensis LMG 19424] Length = 263 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 85/253 (33%), Gaps = 11/253 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF---LKCGINTGLVGFAEVKANGDWK 57 M K F +L + F + S + G++ AN + Sbjct: 1 MKK-FAALLLISSVALFAACGKKESAPAPAAGTDTATRIVVGLDDNFPPMGFRDANNELV 59 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D + S + +++ P++ + L K++D+L T R+ ++ Sbjct: 60 GFDIDMAKEASRRLG---MTVEFKPIDWSAKEAELNGKRVDVLWNGLTITEERKK--NIS 114 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + Q I+ + + + + L+G + Q G++ + + F Sbjct: 115 FTAPYMTNHQIVIVGTQSPVKAKADLAGRIVGAQDGSSAVDAIKKESQIAASLKELKTFG 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A R DA D + L + R E+ +L + + + D E Sbjct: 175 DNVTALMDLSAGRLDAIVVDE--VVGRYLISKRAGEYRVLEENFGTEDYGVGVRKDDAEL 232 Query: 238 YNIVSWTHYAMVT 250 + T +M Sbjct: 233 LGKLDKTLASMKQ 245 >gi|15900517|ref|NP_345121.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae TIGR4] gi|111656914|ref|ZP_01407738.1| hypothetical protein SpneT_02001841 [Streptococcus pneumoniae TIGR4] gi|149002289|ref|ZP_01827231.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS69] gi|149021569|ref|ZP_01835624.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP23-BS72] gi|168490505|ref|ZP_02714648.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC0288-04] gi|14972084|gb|AAK74761.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae TIGR4] gi|147759604|gb|EDK66595.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS69] gi|147930265|gb|EDK81250.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP23-BS72] gi|183574881|gb|EDT95409.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC0288-04] Length = 254 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 11/241 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ F Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K +K+ + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR D ++ D S L +L D S + +TE + + Sbjct: 176 AHRIDTFSVDRSILSGYTSKRT-----ALLDDSFKPSDYGIVTKKSNTELNDYLDNLVTK 230 Query: 248 M 248 Sbjct: 231 W 231 >gi|241630654|ref|XP_002408387.1| cystine-binding periplasmic protein, putative [Ixodes scapularis] gi|215501179|gb|EEC10673.1| cystine-binding periplasmic protein, putative [Ixodes scapularis] Length = 249 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 84/236 (35%), Gaps = 11/236 (4%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSS 69 + L + A L DIKK G LK F V G DVDF +AL+ Sbjct: 1 ATLTLALVAGVAQADRLDDIKKTGVLKVASFDSNPPFGFVDQKSRQITGLDVDFAQALAD 60 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + + N R L S ++D++ N T R + F + GQ F Sbjct: 61 KLGVKLEVLP---TNPANRVPLLTSNKVDLVLANFTITEERAK--QVDFSIPYFASGQQF 115 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + K +SS QL+ I V GT E+ L + + + ++ A R Sbjct: 116 LAKKG-VLSSPEQLNSLRIGVDKGTVNEIVLREKYPQAK----LVAYDDTPFAFTALRNG 170 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A T D L L + I IS+ + I +G+T + V T Sbjct: 171 NVQAITQDGPKLIGLLANVPDKENYEIPAFSISEDLIGIGIPKGETALKSFVDETL 226 >gi|222148131|ref|YP_002549088.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] gi|221735119|gb|ACM36082.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] Length = 260 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 87/245 (35%), Gaps = 10/245 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M++ +++ + F +A LGDI KRG LK + F V + G+D Sbjct: 1 MHRRTLLALGLSLATFAAVLPAHADALGDITKRGTLKVAVPQDFPPFGSVGTDMQPVGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + ++ +P+ + R LQ+ ++D++ + RE + F Sbjct: 61 IDTAALIAKKLGVK---LELVPVTSANRIPYLQTNKVDLVISSLGKNPDREKV--VDFST 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G I S + LSG S+ V G +L L + +E Sbjct: 116 AYAPFYNGVFAPADTAIKSAADLSGKSVGVTRGAVEDLELTKVAPS---DAVIKRYEDNN 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +A+ + + DA A+ P + +I SP + + Sbjct: 173 GTISAFLSGQVDAVATGNVVAAAILA--KNPPKRPEPKFLIKNSPCFIGFNKNEPALAEK 230 Query: 241 VSWTH 245 ++ Sbjct: 231 INAII 235 >gi|158424904|ref|YP_001526196.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] gi|158331793|dbj|BAF89278.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] Length = 267 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 78/231 (33%), Gaps = 11/231 (4%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + + A L +IKKRG + ++ G F AN G DV+ + +++ + Sbjct: 21 MGSFALPARADTLDEIKKRGKILIAVDLGSPPFGMNDANMQPTGSDVESAKLIAADLG-- 78 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ + + + R L + + D++ + T R+ + F K Sbjct: 79 -FPLEIVQVTSPNRIPFLLTGKADLVMASFSVTDERKKV--IDFSDPYGVIQIVVAAPKS 135 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + + L G + G++ + + ++ + A + + + Sbjct: 136 VAVKDLKDLVGKRLGTTRGSSNDKEATTQA----QGAEMVRYDDDATLITALVSGQVNIM 191 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + A+ + L ++ +P A + +GD V+ Sbjct: 192 ASSPQVMAAVNARRPNDPLEIKL--VLKTNPYAAGLRKGDDALREAVNKVI 240 >gi|15888714|ref|NP_354395.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15156456|gb|AAK87180.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 261 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 87/246 (35%), Gaps = 11/246 (4%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M+ + ++I + + S + A LGDI RG ++ + F V + +G+ Sbjct: 1 MFSRRLLLAIAAVSVTLGFSPAAFADALGDISSRGTIRVAVPQDFPPFGSVGTDMAPQGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + + ++ +P+ + R LQ+ ++D++ + RE + F Sbjct: 61 DIDVANLIGEKLGVK---VELVPVTSANRVPYLQTNKVDLVISSLGKNPDREKV--IDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G ++ LSG +I V G +L L A +E Sbjct: 116 TAYAPFFNGVFAPDSVTVAKAEDLSGKTIGVTRGAVEDLELTKVAPA---DTTIKRYEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +A+ A + +A A+ P + L +I SP + + Sbjct: 173 NGTISAFLAGQVEAVATGNVVAAAILA--KNPPKRPELKFLIKNSPCYIGLNKEQPALLE 230 Query: 240 IVSWTH 245 V+ Sbjct: 231 KVNAII 236 >gi|310819142|ref|YP_003951500.1| glutamine ABC transporter substrate-binding protein [Stigmatella aurantiaca DW4/3-1] gi|309392214|gb|ADO69673.1| Glutamine ABC transporter substrate-binding protein [Stigmatella aurantiaca DW4/3-1] Length = 469 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 86/243 (35%), Gaps = 10/243 (4%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 ++L + A L I+ G L+ I+ + NG GFDVD R L+ + Sbjct: 1 MLLPVLAEPAPAGELERIRTAGVLRVAIDATYPPMEFL-ENGQPVGFDVDLSRELARRLG 59 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 Q++ ++ L S + DI+ + + T R + F Q F+ Sbjct: 60 VTA---QFIVMDWDGILAGLTSGRYDIIVSSMNITPER--LQQVDFI-EYARLSQVFVTT 113 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 + + I + +L+G + VQ TT++ + + F E +A +A + D Sbjct: 114 RGQSIRTEQELAGHRVAVQTNTTSQRWVERLQQRGVHVREIRPFPGATECFSAVKAGQAD 173 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 D R V+ + P+ AI + + ++ + + Sbjct: 174 VIVIDEPVGLFF---ARRDDAFVMTGKALDAEPIGIAIDKKAPDLTAALTRALQDIRDSG 230 Query: 253 ELG 255 E Sbjct: 231 EQK 233 >gi|219683680|ref|YP_002470063.1| glutamate-binding protein of ABC transporter system [Bifidobacterium animalis subsp. lactis AD011] gi|219621330|gb|ACL29487.1| glutamate-binding protein of ABC transporter system [Bifidobacterium animalis subsp. lactis AD011] Length = 271 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 100/256 (39%), Gaps = 13/256 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + LF + ++S G+ ++ GI G +G ++GFD Sbjct: 1 MARKAIAMVCAASALFGMAACGSSSADGE----KKIRIGIKYDQPGLGFK-KSGTFEGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD R +++ + ++I++L +K+R LQ+ +D++ T R+ ++F Sbjct: 56 VDVARYVANQLGYTDAEIEFLEAPSKQREAMLQNGDVDMILATYSITDERKK--AVSFAG 113 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ ++ I+ L+G +C G+T+ + + F + + Sbjct: 114 PYFVAGQDLMVRADDHSINGPEDLNGKRLCSVTGSTSAKVVKERFAK---EVQLMEQPGY 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + DA T D L L + ++ ++ I +GDT + Sbjct: 171 AECATALFSGIVDAVTTDDIILAGLASASRGK--LRVVGKPFTQEYYGVGIRKGDTAFAK 228 Query: 240 IVSWTHYAMVTAEELG 255 ++ M+ + E Sbjct: 229 QINAAIEDMIKSGEWE 244 >gi|66043627|ref|YP_233468.1| cystine transporter subunit [Pseudomonas syringae pv. syringae B728a] gi|63254334|gb|AAY35430.1| extracellular solute-binding protein, family 3 [Pseudomonas syringae pv. syringae B728a] Length = 265 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 86/245 (35%), Gaps = 10/245 (4%) Query: 2 YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S + L++ + L IK G L G+ F+ V +G GF+ Sbjct: 7 RRTFLFSAMGLMLSAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + + P AL SK++D++ + R+ + Sbjct: 67 VEFSEALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSEPY 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + I SV LSG + V GT E ++ KA+ ++ Sbjct: 124 TISGIQALVLKKNADTIKSVKDLSGKKVGVGLGTNYE----EWLKANVPDAIVKTYDDDP 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 R DA D L AL++ ++ V + S+ A+ +G+ E Sbjct: 180 SKIQDLSVGRIDAILVDR--LAALEMAAKTKNKLVPAGEAFSRQASGIALRKGEPELLAA 237 Query: 241 VSWTH 245 + Sbjct: 238 IDKAI 242 >gi|325978782|ref|YP_004288498.1| putative glutamine transport system substrate-binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178710|emb|CBZ48754.1| putative glutamine transport system substrate-binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 270 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 110/279 (39%), Gaps = 19/279 (6%) Query: 1 MYKDF--------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K + +L L T + + + I+ G LK G+ + F A Sbjct: 1 MKKKLGLAILASLSLILLTLFAGKTTFADSVSEQVKKIQDAGVLKVGVKQDVPNFGYYSA 60 Query: 53 -NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G ++G +VD + ++ + + + + A+ R L + QIDIL T R+ Sbjct: 61 ETGKYEGMEVDLAKKIAKKLGVK---VSFTAVTAQTREALLDNGQIDILIATYTITEERQ 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 S + Y+D GF+++K KG S++ L G +I V G+TT+ + +Y +AHN+ + Sbjct: 118 ASYAI--SDPYYYDEIGFLVNKSKGYDSIADLDGLTIGVAQGSTTKSAIEEYGEAHNLSF 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + E+ + A+R A++ D S L I+ + + A Sbjct: 176 NFVQLGSYPELAISLYANRISAFSVDKSILTGYVSKKT-----EIIDEGFNTQEYGIAAT 230 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + + + ++ T L + + Sbjct: 231 KSNQSVIDYINDLLADWKTDGSLQKLYDKYDLTPATADD 269 >gi|67643524|ref|ZP_00442269.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei GB8 horse 4] gi|166998513|ref|ZP_02264371.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei PRL-20] gi|167847286|ref|ZP_02472794.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei B7210] gi|254178914|ref|ZP_04885568.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein, truncation [Burkholderia mallei ATCC 10399] gi|254202701|ref|ZP_04909064.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei FMH] gi|254208041|ref|ZP_04914391.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei JHU] gi|147746948|gb|EDK54025.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei FMH] gi|147751935|gb|EDK59002.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei JHU] gi|160694828|gb|EDP84836.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein, truncation [Burkholderia mallei ATCC 10399] gi|238524887|gb|EEP88317.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei GB8 horse 4] gi|243065198|gb|EES47384.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia mallei PRL-20] Length = 262 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 82/222 (36%), Gaps = 6/222 (2%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLA 91 + G + F+ N G+ DF + A+ +++ +P+ ++ R Sbjct: 2 IALGHRESSIPFSYYDQNQQVVGYSRDFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPL 61 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 +Q+ +DI +T L R+ F + G + K GI + L G ++ Sbjct: 62 VQNGTVDIECGSTTNNLDRQKQAA--FSDTIFVIGTRLMTKKDSGIKDFADLKGKTVVTT 119 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 AGTT+E L + + M I + E R A+ D + L + +P Sbjct: 120 AGTTSERLLREMNNKNQMGMSIISAKDHGESFQTLETGRAVAFMMDDALLAGERAKAKQP 179 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 E VI+ S+ + + D + +V + + E Sbjct: 180 GEWVIVGKPQSQEAYGCMMRKDDPAFKKVVDDAIVQVEKSGE 221 >gi|300870609|ref|YP_003785480.1| polar amino acid uptake ABC transporter amino acid-binding protein [Brachyspira pilosicoli 95/1000] gi|300688308|gb|ADK30979.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Brachyspira pilosicoli 95/1000] Length = 268 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 40/255 (15%), Positives = 86/255 (33%), Gaps = 15/255 (5%) Query: 1 MYKDFFVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + + + + + + + + + L +K++G L G++ G Sbjct: 1 MKRILILFSMIIFAISCSKTETQNTQAGADNSLQKVKEKGKLVLGLDDTFAPMGFRDEAG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D + +++ + ++ P++ L+L +D+L R Sbjct: 61 NVVGFDIDLAQEVANRLGVK---LEVKPIDWASGILSLNKGDVDMLWNGFTINETR--KQ 115 Query: 115 GLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + + +K I+S L G + VQ G+ E AD Sbjct: 116 QINFSKPYLNNRLIIVKSSDRKDINSKEDLKGKVLGVQVGSNQEALEADPISK--EAKEV 173 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 ++ +A R D D A + + + V+ +++ + Sbjct: 174 RPYDVNVNAFLDLQAKRIDVVVIDEVA-ARYYIAEENVNFEVVENSPLTEELYGIGFRKN 232 Query: 234 DTEWYNIVSWTHYAM 248 D E N V M Sbjct: 233 DVELLNAVDKALDDM 247 >gi|210630037|ref|ZP_03296222.1| hypothetical protein COLSTE_00106 [Collinsella stercoris DSM 13279] gi|210160714|gb|EEA91685.1| hypothetical protein COLSTE_00106 [Collinsella stercoris DSM 13279] Length = 306 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 45/284 (15%), Positives = 87/284 (30%), Gaps = 23/284 (8%) Query: 6 FVSILCLIILFFTSFSTNASILG--------------DIKKRGFLKCGINTGLVGFAEVK 51 S + LF A+ G L G + + V Sbjct: 31 VASAAMALTLFVGCGGAPAATNEGSAAGSAAATSKDTSAVATGKLIVGFDQSYPPYGYVG 90 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G++ GFD+D RA++ + ++ ++ + L+S I+ + + Sbjct: 91 DDGEYTGFDLDLARAVAEEQGWE---LELEAIDWDAKDAMLKSGAINCIWNGFTMDNRED 147 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA-HNMK 170 F + Q ++ GI L+G ++ Q + E L + Sbjct: 148 ---DYTFSDPYMLNAQVVVVRADSGIEDAEGLAGKTVVTQVDSAAEAVLKEDAADLAATF 204 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + DA D+S A+ +P +V+L D +S+ A Sbjct: 205 ASLETIGDYNTAFMQLESGAVDAVACDLSI--AMYQMTAKPDAYVMLDDYLSEENYAVGF 262 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 +GDT V+ T A+ + N ++ Sbjct: 263 KKGDTATAKKVTETLKALYEDGTVDEIAAKYADQGLTMDNWQIK 306 >gi|330838427|ref|YP_004413007.1| ABC-type transporter, periplasmic subunit family 3 [Selenomonas sputigena ATCC 35185] gi|329746191|gb|AEB99547.1| ABC-type transporter, periplasmic subunit family 3 [Selenomonas sputigena ATCC 35185] Length = 259 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 79/249 (31%), Gaps = 14/249 (5%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKG 58 M K + + L+ + + L+ G N F NG ++G Sbjct: 1 MKMKKMLLGAVGLLAAASFAVAGCGGSGDSGSASKTLRVGTNADFAPFEFQGENGKEYEG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D RA++ + +N AL SK IDI R+ + F Sbjct: 61 FDMDLARAVAEEMG---MTADIQNINFDGLIPALVSKNIDIAISGMTINDERKK--NVLF 115 Query: 119 RPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G ++ K I+ L+G ++ VQ GTT+ + N Sbjct: 116 SEPYYQSGLTIVVKKDNTDINGFKDLAGKTVAVQIGTTSAKEV-----KKNPDIQVKELN 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + +A A D + + ++ ++++ A+ + + E Sbjct: 171 SSADTFLELKAGGVQAVVNDRPVNDYYIAKSGE-KDVRVVNELLTSEDYGIAMAKDNQEL 229 Query: 238 YNIVSWTHY 246 V Sbjct: 230 QKKVDEALK 238 >gi|329939958|ref|ZP_08289240.1| glutamate uptake system binding subunit [Streptomyces griseoaurantiacus M045] gi|329300784|gb|EGG44680.1| glutamate uptake system binding subunit [Streptomyces griseoaurantiacus M045] Length = 279 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 79/224 (35%), Gaps = 7/224 (3%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 +K GI G +G + GFDVD + ++ + D I + + +R ALQ Sbjct: 40 IKVGIKFDQPGLGLKTPDGSYTGFDVDVAKYVAKELGYDEKNIDFKETPSADRENALQRG 99 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 +D + + T R+ + F Q ++ I+ + L+G +C G+T Sbjct: 100 DVDYIVASYSITDERKA--KVDFAGPYLLAHQDLLIRADDKIAKGADLNGKKLCSVTGST 157 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 + + K + E + DA T D S L + + Sbjct: 158 SAQNVKKTIA---PKAQLREYGTYSECMDGLTSGAVDALTTDDSILAGYASQDQYKGKVK 214 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTH--YAMVTAEELGIT 257 + +S + +GDT+ + ++ A A E + Sbjct: 215 LAGLKLSNENYGIGVKKGDTKMTDKINKALEKMASDGAWEKAVK 258 >gi|309802692|ref|ZP_07696796.1| ABC transporter, substrate-binding protein, family 3 [Bifidobacterium dentium JCVIHMP022] gi|308220756|gb|EFO77064.1| ABC transporter, substrate-binding protein, family 3 [Bifidobacterium dentium JCVIHMP022] Length = 301 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 11/220 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L +IKK G LK + + F V +G++ G+DV F L+ + Y + Sbjct: 53 ARTLDEIKKSGELKVAVFSDKAPFGYVDKDGNYAGYDVYFAERLAKDLGVKA---AYTSV 109 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R L S ++D+ N T R+ + F G + + I+ VSQL Sbjct: 110 DPAARVDVLTSNKVDVTLANFTVTDERKE--KVDFAKPYMKVALGVVSPEGAEITDVSQL 167 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G ++ V GTT E F+ + +++ + A R DA++ D + + A Sbjct: 168 KGKTLIVAKGTTAETY----FEKNEPDIKLQKYDQYADAYNALLDGRGDAFSTDNTEVLA 223 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 V + + + +APA+ +G+ E + ++ Sbjct: 224 WA--KSNKGFKVGITKLGDEDTIAPAVQKGNKELLDWINE 261 >gi|261379030|ref|ZP_05983603.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria cinerea ATCC 14685] gi|269144568|gb|EEZ70986.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria cinerea ATCC 14685] Length = 268 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 89/258 (34%), Gaps = 11/258 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWKGF 59 M K +I C + + G + + N F + + GD +GF Sbjct: 3 MKKWIAAAIACSALTLSACGGQSKDAASPAANTGKVYRVASNAEFAPFESLDSKGDVEGF 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A++ KI++ F AL + D++ T + + F Sbjct: 63 DVDLMNAMAKE---GNFKIEFKHQPWDSLFPALNNGDADVVMSGVTITD--DRKQSMDFS 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q ++ K K ISS L + V G T + +++ + N FE Sbjct: 118 DPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVTGYTGDFSVSKLLGSDN--PKIARFEN 175 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEW 237 V I D+ D + + N + + V LPD + A+ +GD E Sbjct: 176 VPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGMDFVTLPD-FTTEHYGIAVRKGDGET 234 Query: 238 YNIVSWTHYAMVTAEELG 255 +++ + + E Sbjct: 235 LKVMNDALKKVRESGEYD 252 >gi|161507579|ref|YP_001577533.1| amino acid ABC transporter substrate-binding protein [Lactobacillus helveticus DPC 4571] gi|260101514|ref|ZP_05751751.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] gi|300812411|ref|ZP_07092841.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|160348568|gb|ABX27242.1| amino acid ABC transporter substrate-binding protein [Lactobacillus helveticus DPC 4571] gi|260084657|gb|EEW68777.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] gi|300496578|gb|EFK31670.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|323466463|gb|ADX70150.1| Amino acid ABC transporter substrate-binding protein [Lactobacillus helveticus H10] gi|328466385|gb|EGF37537.1| amino acid ABC transporter substrate-binding protein [Lactobacillus helveticus MTCC 5463] Length = 286 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 99/262 (37%), Gaps = 32/262 (12%) Query: 1 MYKD----FFVSILCLIILFFTS----------FSTNASILG------DIKKRGFLKCGI 40 M K + I+ LI++ + T S +IK+RG+++ + Sbjct: 1 MKKKNIFNIIMGIVALIVVVSAAYFGFTQPNLNSGTAGSRWSNENGVSEIKRRGYIRVAV 60 Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 L + V G G+DV R ++ + KI+++ +NA R L S + DI+ Sbjct: 61 FGDLPPYGWVNDQGKRVGYDVYLARRIAKDL---NVKIRFIQVNANNRVDTLNSNKADIV 117 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 N T R+ + F G I K I+S +L G + V GTT E Sbjct: 118 LANFTVTPERK--DVVDFAKPYMKVSVGVISPKNAPINSAQELKGKKLIVTKGTTAENYF 175 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 A + + F+ + A + R A D S LYA P V + I Sbjct: 176 -----AKQSGVNLLKFDSKTQQFNALKNGRGAALADDNSYLYAW--VKKNPKYVVGIKSI 228 Query: 221 ISKSPLAPAIIQGDTEWYNIVS 242 + +APA+ +G+ + Sbjct: 229 GPRQYVAPAVKKGNRSLLKWTN 250 >gi|148992284|ref|ZP_01822007.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP9-BS68] gi|168488293|ref|ZP_02712492.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP195] gi|237649852|ref|ZP_04524104.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CCRI 1974] gi|237821285|ref|ZP_04597130.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CCRI 1974M2] gi|147928910|gb|EDK79922.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP9-BS68] gi|183573167|gb|EDT93695.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP195] gi|332074415|gb|EGI84891.1| major cell-binding factor [Streptococcus pneumoniae GA17570] Length = 254 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 11/241 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ F Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K +K+ + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR D ++ D S L +L D S + +TE + + Sbjct: 176 AHRIDTFSVDRSILSGYTSKRT-----ALLDDSFKPSDYGIVTKKSNTELNDYLDTLVTK 230 Query: 248 M 248 Sbjct: 231 W 231 >gi|116617275|ref|YP_817646.1| amino acid ABC transporter periplasmic protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096122|gb|ABJ61273.1| amino acid ABC transporter substrate-binding protein, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 281 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 11/225 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + + +IKK G +K + L + V NG +G+D++ + ++ + ++Y+ Sbjct: 35 QSGRTVKEIKKSGEIKIAVFGDLKPYGWVDKNGKRQGYDIELAKKVAKDLGVK---VKYV 91 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 +NA R AL S ++D+ N T R+ + F G K K I+ V Sbjct: 92 QVNANARVDALNSGKVDLALANFTVTPERKKV--IDFAKPYMKVSIGVASKKSKLITKVD 149 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G + V GTT E F + K + F+ + AA + R DA T D S L Sbjct: 150 QLHGKKLIVNKGTTAETY----FTKNYTKASLLKFDSKTQQFAALKDGRADAITDDNSYL 205 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 +A P V + + +S ++P + +G+ Sbjct: 206 FAW--VKSHPDYKVGIKKLGEQSYISPGVQKGNKSLLKWTDKEIN 248 >gi|94309646|ref|YP_582856.1| extracellular solute-binding protein [Cupriavidus metallidurans CH34] gi|93353498|gb|ABF07587.1| glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 302 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 86/234 (36%), Gaps = 8/234 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPS-KI 78 + L IK G + G + F+ + G+ D+ A+ + + P+ ++ Sbjct: 31 DGDTLKKIKDSGVISLGYRESSIPFSYSDGK-EVMGYSHDYLLAIVDKVKSTLNMPNLQV 89 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + P+ ++ R +Q+ IDI +T L R+ + F + G + K G++ Sbjct: 90 KLTPITSQNRIPLMQNGTIDIECGSTTNNLERQKQVA--FSNSLFIYGIRMLTKKDSGVT 147 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 QL ++ AGTT E L M + + + + R A+ D Sbjct: 148 DFPQLKDKNVVTTAGTTGERLLVKMNGE-GMNMNLTSAKDHGQAFLILESGRAAAFVMDE 206 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 LY + +E V+ + A + D + +V ++T+ Sbjct: 207 PLLYGERTKAKNAAEWVVAGKPLQTENYACMFRKDDPSFKKLVDGVVADIMTSG 260 >gi|302545376|ref|ZP_07297718.1| amino acid ABC transporter, amino acid-binding protein [Streptomyces hygroscopicus ATCC 53653] gi|302462994|gb|EFL26087.1| amino acid ABC transporter, amino acid-binding protein [Streptomyces himastatinicus ATCC 53653] Length = 348 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 84/242 (34%), Gaps = 16/242 (6%) Query: 15 LFFTSFSTNASILGDIKKR-------GFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRA 66 S + + IK+R G L G++ + G+ GFD+D RA Sbjct: 72 ASLRPSSASGPAIKRIKERKIHGHKVGKLIAGVDQNSYRWGYRDPATGELTGFDIDIVRA 131 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ IF DP + Y + +R ALQ ++DI+ R + +AF + G Sbjct: 132 IAKDIFGDPDAVIYRTIPTSQRIKALQQGKVDIVVRTMTINC--DRIKDVAFSTAYFQAG 189 Query: 127 QGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFK--AHNMKYHPIVFERVEEID 183 Q ++ I+ ++ L G +C G+T E L + K + Sbjct: 190 QQVLVPDDSSITGYNRTLRGKRVCTAQGSTAEAVLDEPEKGAEALGAIKVKPVPNQLDCL 249 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + + DA D + + ++ + A+ + D + V+ Sbjct: 250 VRLQMGQVDAVITDNALAAGQAAQDP---SVKLVGPRFTDELYGVAMNKNDDDLVRRVNQ 306 Query: 244 TH 245 Sbjct: 307 VL 308 >gi|149010773|ref|ZP_01832144.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP19-BS75] gi|147765254|gb|EDK72183.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP19-BS75] Length = 254 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 98/241 (40%), Gaps = 11/241 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67 ++ L L + + DI+KRG L G+ + F G + G + D + + Sbjct: 1 MISLFGLAAAKPVQADTSIADIQKRGELVVGVKQDVPNFGYKDPKTGTYSGIETDLAKMV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + KI+Y+P+ A+ R L ++Q+D+ T R+ F Y D Sbjct: 61 ADEL---KVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKL--YNFTSPYYTDAS 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+++K I + L+G +I V G+ T+ + + K +K+ + E+ + Sbjct: 116 GFLVNKSAKIKKIEDLNGKTIGVAQGSITQRLITELGKKKGLKFKFVELGSYPELITSLH 175 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 AHR DA++ D S L +L D S + + +TE + + Sbjct: 176 AHRIDAFSVDRSILSGYTSKRT-----ALLDDSFKPSDYSIVTKKSNTELNDYLDNLVTK 230 Query: 248 M 248 Sbjct: 231 W 231 >gi|3603430|gb|AAC35851.1| amino acid-binding protein Abp [Streptococcus uberis] Length = 277 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 79/252 (31%), Gaps = 12/252 (4%) Query: 2 YKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K ++ LF + + KK + G + V +G Sbjct: 4 KKILLTTLALASTLFLVACGKSSAAKTDQWDTYKKEKSITLGFDNTFVPMGFKDESGKNT 63 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDV+ +A+ K+++ P+N + L++ +ID++ T R+ +A Sbjct: 64 GFDVELAKAVFQEYG---IKVKFQPINWDLKETELKNGKIDMIWNGYSVTKERQA--KVA 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHPI 174 F + Q + K I+S + + G + Q+G++ K Sbjct: 119 FSTPYMKNEQVLVTKKSSNITSFAAMKGKVLGAQSGSSGYDAFTSNPKVLKDIVKDNDAT 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +E + + R D D + + I+ A + + D Sbjct: 179 QYETFIQAFIDLKNDRIDGLLIDKVYANYYLKQEGELTNYNIVKSEFDGEDFAVGVRKED 238 Query: 235 TEWYNIVSWTHY 246 ++ Sbjct: 239 KILLKNINSAFT 250 >gi|302525507|ref|ZP_07277849.1| glutamate binding periplasmic protein [Streptomyces sp. AA4] gi|302434402|gb|EFL06218.1| glutamate binding periplasmic protein [Streptomyces sp. AA4] Length = 301 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 92/256 (35%), Gaps = 11/256 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + I IK G + G+ + G ++GFD++ R +++ + KI+Y Sbjct: 54 SPIFAKIKSAGTITIGVKDDQPELGQKDPKTGKFQGFDIEIARMVAAGLGISEDKIKYTT 113 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVS 141 +++ R A+ + Q+D+ R+ ++F + GQ ++ K I+ Sbjct: 114 VDSGAREQAISNGQVDLYVGTYTINDKRKKL--VSFAGPYFQAGQDLLVRKDDTSITGPE 171 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G +C G+T + + + + F++ + DA T D + L Sbjct: 172 TLKGKKVCSVTGSTPIQRV----REQKLTDQIVEFQKYSQCVEKLTTKDVDAVTTDDAIL 227 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM-VTAEELGITQKN 260 P ++ SK P + + D + + A I Sbjct: 228 KGYAAQ--DPDSFKVVGKPFSKEPYGIGLNKDDKVLRDKIDDLLQAAETNGTWKKIYDAT 285 Query: 261 INQVSKDTTNPDVQRF 276 + + T P ++R+ Sbjct: 286 LGKSGAPATPPAIERY 301 >gi|218245993|ref|YP_002371364.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC 8801] gi|257059044|ref|YP_003136932.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] gi|218166471|gb|ACK65208.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8801] gi|256589210|gb|ACV00097.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] Length = 255 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 93/256 (36%), Gaps = 18/256 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ +I S + +A L +I KRG L + + NG+ +G + Sbjct: 1 MRKILSSLLISGLIAALISPAWSAE-LEEILKRGQLIVAVKDNVRPLGFSDQNGELQGLE 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D R L+ + DP + + P++ ++R + +++D+ T R + F P Sbjct: 60 IDLARRLAEELLGDPQAVIFQPVSNQKRLQMVIDQEVDLAIARVSVTPSRNRL--VDFSP 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y DG G + K+ + V+ L+ I V ++T + F + E Sbjct: 118 YYYLDGTGLVT-KQSYLGGVAGLAKGKIAVLRVSSTIAVIRAEFPQA----ELVGVNSYE 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-------G 233 E DA+ GD S L + P +S L + + Sbjct: 173 EALRLLENETVDAFAGDNSILAGWVQDYPSYRQW---PVRLSGEALGVVMPKGLQYASLR 229 Query: 234 DTEWYNIVSWTHYAMV 249 D IV W + Sbjct: 230 DRVNRAIVRWQKSGWL 245 >gi|323142139|ref|ZP_08076984.1| glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Phascolarctobacterium sp. YIT 12067] gi|322413399|gb|EFY04273.1| glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Phascolarctobacterium sp. YIT 12067] Length = 274 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 76/257 (29%), Gaps = 13/257 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M K F+ + L + L+ G F K + GF Sbjct: 17 MKKILFLVMAVLTAASMMIAGCGGGDKKAAEPEKVLRVGTEPTFAPFEFQKEGSKSYDGF 76 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D RA+ + ++ + + AL S ID+++ R+ + F Sbjct: 77 DMDLARAIGKQMGYK---VEIVSMGFDALIPALNSGNIDVVAAGMSINEERQK--AVTFS 131 Query: 120 -PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 P + + SV L G I Q GTT E + A F Sbjct: 132 EPYYTSGLIVMVNKDNNEVKSVKDLEGKRIACQIGTTGEKNARNVANAK-----VTAFNT 186 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E + DA D + S + DI+ A+ +G+ + Sbjct: 187 NDEAVMELKNKGVDAIINDSPVVGYYLAQGGNAS-MKTVGDIMEAEQYGLAVKKGNDKLA 245 Query: 239 NIVSWTHYAMVTAEELG 255 ++ + E Sbjct: 246 GEINKALAELKKNGEYD 262 >gi|222082710|ref|YP_002542075.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221727389|gb|ACM30478.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 262 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 93/244 (38%), Gaps = 4/244 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + S L ++ RG L G + + A+ +GFD+D R ++ A+F DP K Sbjct: 3 AAAQQAKSKLDEVLARGHLVMGTGSTNAPWHFKSADDKLQGFDIDMGRIVAKALFGDPDK 62 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I+++ ++ R + + ++D+ + T R + +AF Y +G G ++ Sbjct: 63 IEFVNQSSDARIPNITTDKVDLTCQFMTVTGER--AQQIAFTIPYYREGVGLMLKADGKY 120 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + L A V + A +E V+ I A + R DA D Sbjct: 121 ADYAALKAAGSSVTISVLQNVYAEAMVHAALPDATVDQYESVDLIYQALESGRADAVATD 180 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 S+L P + + A + +GD +W N V+ + +T E Sbjct: 181 QSSLAWYMTQ--NPGRYKDAGYGWNPQTYACGVKRGDQDWLNFVNTALHEAMTGVEFDFY 238 Query: 258 QKNI 261 + Sbjct: 239 AASY 242 >gi|241762841|ref|ZP_04760904.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241368016|gb|EER62221.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 265 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 67/211 (31%), Gaps = 7/211 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G++ GFD+D + + + ++++ P++ + L Sbjct: 39 KIVVGLDDNFPPMGFRDDKNQLVGFDIDMAKEAAKRLG---LEVEFKPIDWSAKEAELSG 95 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K++D L T R+ +AF + Q ++ I + + L+G + Q G+ Sbjct: 96 KRVDALWNGLTITEERK--QNIAFTAPYMENHQIIVVPAGSAIKTKADLAGKVVGAQEGS 153 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + + F R +A D + +P + Sbjct: 154 SAVDAIKKEDAVFKSFKEFKTFGDNVTALMDLTTGRLEAVVVDE--VVGRYYVAKKPDAY 211 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 +L D + + DTE + + Sbjct: 212 AVLGDNFGTEEYGVGLRKDDTELHGKLEKAL 242 >gi|238027537|ref|YP_002911768.1| extracellular solute-binding protein, family 3 [Burkholderia glumae BGR1] gi|237876731|gb|ACR29064.1| Extracellular solute-binding protein, family 3 [Burkholderia glumae BGR1] Length = 264 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 77/237 (32%), Gaps = 14/237 (5%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 + + + A +L +K+RG L+ G+ F GD G+DVD +A+++ + Sbjct: 15 IGASLVAATAHAADLLDQVKQRGTLRIGLEGTFPPFNSKSPQGDLVGYDVDIAKAVAAKL 74 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 P ++ LQ+ + D++ T R+ L F P + I Sbjct: 75 GVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGVTDKRKEV--LDFSPAYTYSAAQLIQ 129 Query: 132 HKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 K S+ L G + V GT + E A Sbjct: 130 RKDDPRQFKSLDDLKGKKLGVGLGTNYMD-----MAKSVPGIDVKTYPGAPEYLRDLAAG 184 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 R DA D L L + P + + P A +G+ ++ + Sbjct: 185 RLDAALNDRLMLAYLLKNSQLP--LRTGATLQAGEPSAIPFKKGNPKFAKAIDDAMT 239 >gi|158425756|ref|YP_001527048.1| putative amino acid ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] gi|158332645|dbj|BAF90130.1| putative amino acid ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] Length = 304 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 86/258 (33%), Gaps = 10/258 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + ++ L L + T+ A L DI K G +K + F V + G+D+ Sbjct: 46 RRTLVLAGLGLAAVSLTALPARADALDDIMKAGVIKIAVPQDFPPFGSVGPDLKPVGYDI 105 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D ++ + + + + R LQ+K++D++ + RE + F Sbjct: 106 DMANLIAQKLGVKAELVP---VTSANRIPYLQTKKVDLVISSLGKNPDREKVM--DFSVA 160 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G ++ +L+G ++ V G ++ L+ A FE Sbjct: 161 YAPFFNGAFAPADVKVTKPEELAGLTVGVTRGANEDIELSKIAPA---TADIKRFEDNNA 217 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +A+ + + A+ P + +I SP + + + + V Sbjct: 218 TISAFLSGQVKVIVTGNVTAAAILAR--NPPRKPEVKFLIKDSPCYVGLNKDEPKLLEKV 275 Query: 242 SWTHYAMVTAEELGITQK 259 + A L + Sbjct: 276 NAIITAAKADGALNAISQ 293 >gi|221069035|ref|ZP_03545140.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] gi|220714058|gb|EED69426.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] Length = 269 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 87/288 (30%), Gaps = 31/288 (10%) Query: 1 MYKDFFVSILCLIILFFTSFST--NASILGDIKKRG-----FLKCGINTGLVGFAEVKAN 53 M K ++ + L + ++ L G++ Sbjct: 1 MKKRTLLASVALTAILAACGKNEPASNTAAAPAPAPAAVAAKLVVGLDDNFPPMGFRDEK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFD+D R ++ ++Q+ P++ + L K++D L R+ Sbjct: 61 NELVGFDIDMAREVAKRA---NIEVQFKPIDWNAKEAELLGKRVDALWNGLTILEERKE- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + Q I+ I + + G + Q G++ L + + Sbjct: 117 -KILFSDPYMVNKQIIIVKAGSPIKGKADMVGKVVGAQEGSSAVTALTKDKELSDKFKET 175 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +F A R D + + N +P +V+L + + Sbjct: 176 KLFGDNIAAMMDLEAGRLD--VVVVDEVVGRYYVNKKPDNYVVLAEDFGTEDYGVGFRKD 233 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGID 280 D N V+ ++ KD ++ Q++ G D Sbjct: 234 DEATRNKVNDVLT----------------EMKKDGKAAEIAQKWFGAD 265 >gi|306823349|ref|ZP_07456724.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium dentium ATCC 27679] gi|304553056|gb|EFM40968.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Bifidobacterium dentium ATCC 27679] Length = 311 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 11/220 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L +IKK G LK + + F V +G++ G+DV F L+ + Y + Sbjct: 63 ARTLDEIKKSGELKVAVFSDKAPFGYVDKDGNYAGYDVYFAERLAKDLGVKA---AYTSV 119 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R L S ++D+ N T R+ + F G + + I+ VSQL Sbjct: 120 DPAARVDVLTSNKVDVTLANFTVTDERKE--KVDFAKPYMKVALGVVSPEGAEITDVSQL 177 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G ++ V GTT E F+ + +++ + A R DA++ D + + A Sbjct: 178 KGKTLIVAKGTTAETY----FEKNEPDIKLQKYDQYADAYNALLDGRGDAFSTDNTEVLA 233 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 V + + + +APA+ +G+ E + ++ Sbjct: 234 WA--KSNKGFKVGITKLGDEDTIAPAVQKGNKELLDWINE 271 >gi|116513425|ref|YP_812331.1| amino acid ABC transporter periplasmic protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116092740|gb|ABJ57893.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 286 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 99/262 (37%), Gaps = 32/262 (12%) Query: 1 MYKD----FFVSILCLIILFFTS----------FSTNASILG------DIKKRGFLKCGI 40 M K + I+ LI++ + T S +IK+RG+++ + Sbjct: 1 MKKKNIFNIIMGIVALIVVVSAAYFGFTQPNLNSGTAGSRWSNENGVSEIKRRGYIRVAV 60 Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 L + V G G+DV R ++ + KI+++ +NA R L S + DI+ Sbjct: 61 FGDLPPYGWVNEQGKRVGYDVYLARRIAKDL---NVKIRFIQVNANNRVDTLNSNKADIV 117 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 N T R+ + F G I K I+S +L G + V GTT E Sbjct: 118 LANFTVTPERK--DVVDFAKPYMKVSVGVISPKNAPINSAQELKGKKLIVTKGTTAENYF 175 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 A + + F+ + A + R A D S LYA P V + I Sbjct: 176 -----AKQSGVNLLKFDSKTQQFNALKNGRGAALADDNSYLYAW--VKKNPKYVVGIKSI 228 Query: 221 ISKSPLAPAIIQGDTEWYNIVS 242 + +APA+ +G+ + Sbjct: 229 GPRQYVAPAVKKGNRSLLKWTN 250 >gi|288935409|ref|YP_003439468.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|288890118|gb|ADC58436.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] Length = 261 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 89/245 (36%), Gaps = 11/245 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L + + A L DI+KRG ++ + F V + +G+D Sbjct: 1 MKK-LLIALAGAACLLSSVSAAQADQLQDIEKRGVIRIAVPQDFPPFGSVGTDLQPQGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D R L+ ++ K+Q +P+ + R LQ+ ++D++ + RE + F Sbjct: 60 IDMARYLAKSM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKV--IDFSR 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G K + + LSG SI V G ++ L +E Sbjct: 115 AYAPFFLGVFGPKGAELKDAAALSGKSIGVTRGAVEDMVLTSVAPQA---AQIKRYEDNN 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +AY + + + A+ + + + ++ SP + + + Sbjct: 172 TTLSAYLSGQVQYVATGNLVVAAI--SRQNADKAPVPSFMLKDSPCFIGLKKNEPALKEK 229 Query: 241 VSWTH 245 V Sbjct: 230 VDTLI 234 >gi|238788347|ref|ZP_04632141.1| Cystine-binding periplasmic protein [Yersinia frederiksenii ATCC 33641] gi|238723593|gb|EEQ15239.1| Cystine-binding periplasmic protein [Yersinia frederiksenii ATCC 33641] Length = 262 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 80/250 (32%), Gaps = 16/250 (6%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + V + + L +L +K+RG L G+ F+ +G Sbjct: 1 MVRRQVVLGMVAVALATGLNVKSYAAGDLLDQVKERGTLIVGLEGTYPPFSFQGEDGKLT 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GF+VDF AL+ + + P +L+SK+ID+ + R+ Sbjct: 61 GFEVDFANALAEHMGVKA---KITPTKWDGMLASLESKRIDVAINQVTISEERKK--KYD 115 Query: 118 FRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F G + K + L G + V G+ E L D K Sbjct: 116 FSTPYTISGIQVLTKKGNEGKFNKPEDLEGKKVGVGLGSNYEQWLRDNLK----GVDIRT 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ R R DA D L AL L + ++ A+ + + Sbjct: 172 YDDDPTKYQDLRVGRTDAILVDR--LAALDLVKKTNDTLAVAGPAFARQESGVALRKNNP 229 Query: 236 EWYNIVSWTH 245 E ++ Sbjct: 230 ELLAAINQAI 239 >gi|325125055|gb|ADY84385.1| Glutamine ABC transporter substrate-binding protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 286 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 99/262 (37%), Gaps = 32/262 (12%) Query: 1 MYKD----FFVSILCLIILFFTS----------FSTNASILG------DIKKRGFLKCGI 40 M K + I+ LI++ + T S +IK+RG+++ + Sbjct: 1 MKKKNIFNIIMGIVALIVVVSAAYFGFTQSNLNSGTAGSRWSNENGVSEIKRRGYIRVAV 60 Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 L + V G G+DV R ++ + KI+++ +NA R L S + DI+ Sbjct: 61 FGDLPPYGWVNEQGKRVGYDVYLARRIAKDL---NVKIRFIQVNANNRVDTLNSNKADIV 117 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 N T R+ + F G I K I+S +L G + V GTT E Sbjct: 118 LANFTVTPERK--DVVDFAKPYMKVSVGVISPKNAPINSAQELKGKKLIVTKGTTAENYF 175 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 A + + F+ + A + R A D S LYA P V + I Sbjct: 176 -----AKQSGVNLLKFDSKTQQFNALKNGRGAALADDNSYLYAW--VKKNPKYVVGIKSI 228 Query: 221 ISKSPLAPAIIQGDTEWYNIVS 242 + +APA+ +G+ + Sbjct: 229 GPRQYVAPAVKKGNRSLLKWTN 250 >gi|330981319|gb|EGH79422.1| extracellular solute-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 283 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 95/252 (37%), Gaps = 4/252 (1%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + +L T + S L + KRG L G + + A+G +GFD+D Sbjct: 9 KACAFVLSASFMLANTVQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDID 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R ++ +F+DPSK++++ ++ R L + ++DI + T R + Sbjct: 69 IGRIIAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASRAQQVAS--TLPY 126 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y +G ++ + L A V + + K ++ V+ + Sbjct: 127 YREGVALLLPANSKYKEIDDLKAAGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLM 186 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + R D D S+ L P + S A A+ +GD +W N V+ Sbjct: 187 YQAINSGRADTAATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVN 244 Query: 243 WTHYAMVTAEEL 254 + +T E Sbjct: 245 TALHEAMTGVEF 256 >gi|120612858|ref|YP_972536.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120591322|gb|ABM34762.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 303 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 58/242 (23%), Positives = 103/242 (42%), Gaps = 9/242 (3%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFD---- 73 A + I++ + G+ F+ V A G G+ VD C+A+ I + Sbjct: 24 AQAPADTMARIQQTRTITLGVRESAWPFSFVDAQNGGKAAGYSVDLCQAVVEEIKNTLKL 83 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++Y ++A ER L++ +ID+ +T T R+ + F P + G ++ K Sbjct: 84 KDLEVKYRTVSAAERIPKLEAGEIDLECGSTTNTKARQERVA--FGPTMFVAGIRVLVPK 141 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 +V L+G ++ V G+T+E L A+ +K VF+ +E A RA A Sbjct: 142 GTKADTVQNLAGMTVAVSKGSTSEKLLTQ-LTANEVKAKVKVFDNNDEAFKALRAGTVKA 200 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D S L L N + ++S P A + + DT +V T + T+ E Sbjct: 201 FAQDDSLLLGLVARNKAQDALALGHFVLSVEPYAIMVRKNDTALMTVVDRTLGKLYTSRE 260 Query: 254 LG 255 + Sbjct: 261 ID 262 >gi|238787904|ref|ZP_04631700.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia frederiksenii ATCC 33641] gi|238723852|gb|EEQ15496.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia frederiksenii ATCC 33641] Length = 263 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 90/245 (36%), Gaps = 11/245 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L ++ + S A L I++RG L+ + F V + +G+D Sbjct: 3 MKKRML-AWLGAALILVQAPSVLADQLEQIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ + K+Q +P+ + R LQ+ ++D++ + RE +AF Sbjct: 62 IDMAHYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREK--AIAFSR 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G K + QL+G ++ V G ++ L++ + +E Sbjct: 117 AYAPFFLGVFGAKDDALQQPEQLAGKTVGVTRGAVEDMVLSELAPK---QAQIKRYEDNN 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +AY + + D L L P + ++ SP + QG+ Sbjct: 174 TTLSAYLSGQVDYLATGN--LVVSALARQNPVHAPVAKFMLKDSPCYIGLRQGEPALKAK 231 Query: 241 VSWTH 245 V Sbjct: 232 VDALI 236 >gi|296129397|ref|YP_003636647.1| extracellular solute-binding protein family 3 [Cellulomonas flavigena DSM 20109] gi|296021212|gb|ADG74448.1| extracellular solute-binding protein family 3 [Cellulomonas flavigena DSM 20109] Length = 294 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 90/269 (33%), Gaps = 33/269 (12%) Query: 6 FVSILCLIILFFTSFST-----------------------NASILGDIKKRGFLKCGINT 42 ++++ +L T+ + S + + + G + G Sbjct: 8 LIALMSATVLALTACAGGSDDAGTTEPAGESTAEETAEFPEGSTMARLAEAGSITIGTKF 67 Query: 43 GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 F V NG +GFDV+ + ++ + P I++ + R +++ ++DI+ Sbjct: 68 DQPLFGLVGPNGVPEGFDVEIGKLIAGKLGIAPEDIEWKESISANREPFIENGEVDIVIA 127 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIM-HKKKGISSVSQLSGASICVQAGTTTELTLA 161 R+ ++F Y GQ + I L+G ++C +G+T E L Sbjct: 128 TYTINDKRKEV--VSFAGPYYLAGQSILTLKSNTDIQGPEDLAGKNVCTVSGSTPEANLL 185 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 + + E R + DA + D L + + D Sbjct: 186 E----NYPDATVQALGAYSECIEPLRNGQVDAISTDNVILAGFAA---DNDDLEVRGDPF 238 Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 ++ P + DTE+ N ++ Sbjct: 239 TEEPYGIGLALDDTEFRNWINDVLEESFE 267 >gi|149203652|ref|ZP_01880621.1| putative ABC transporter periplasmic amino acid-binding protein [Roseovarius sp. TM1035] gi|149142769|gb|EDM30811.1| putative ABC transporter periplasmic amino acid-binding protein [Roseovarius sp. TM1035] Length = 268 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 89/255 (34%), Gaps = 8/255 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L+ + + + A L DI G L+C + AN GFD Sbjct: 1 MKK--VTLFAALLGMTSIAGTAQADKLDDIISSGTLRCAVVLDFPPMGMRDANNVPIGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C L++A+ + ++ ER AL S ++D+ +T TL R ++G F Sbjct: 59 VDYCNDLAAALGVEAEIVE---TPFPERIPALMSGRVDVGVASTSDTLERAKTVG--FSI 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + GI+S + G ++ AGT + L K ++ Sbjct: 114 PYFAFEMAVTANSGTGITSYEGMKGHTVGAVAGTYEAIALEAQVKEWGEG-EFRPYQTQA 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ A + DA + A + + V+ +A + + + N Sbjct: 173 DVFLALSQGQLDATVSTSTVAQANVQSGNYKDITVVGFAPFDTDYVALFAKRDEYGFLNY 232 Query: 241 VSWTHYAMVTAEELG 255 + V Sbjct: 233 LDLFVNQQVRTGRYD 247 >gi|225620106|ref|YP_002721363.1| family 3 extracellular solute-binding protein [Brachyspira hyodysenteriae WA1] gi|225214925|gb|ACN83659.1| extracellular solute-binding protein, family 3 [Brachyspira hyodysenteriae WA1] Length = 279 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 82/266 (30%), Gaps = 26/266 (9%) Query: 1 MYK--DFFVSILCLIILFFT---------------SFSTNASILGDIKKRGFLKCGINTG 43 M + + I+ I+ + S + L +K G L G++ Sbjct: 1 MKRISSILLFIIFAFIVSCGGGNNTSSTDTNSAGNATSAEDNSLQKVKDAGKLVLGLDDT 60 Query: 44 LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 NG+ GFD+D + +++ + ++ P+ L+L +D+L Sbjct: 61 FAPMGFRDENGEVVGFDIDLAKEVANRLG---VTLEIKPIEWSSSILSLNKGDVDVLWNG 117 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLAD 162 R + F + + I+S LSG + VQ G+ E AD Sbjct: 118 VTINEAR--KQQINFSKPYLNNKLVIVKASDDNTINSKDDLSGKVLGVQVGSNDEALTAD 175 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 + ++ +A R DA D A P V+ ++ Sbjct: 176 PSSKN--AKEIRRYDVNVNAFLDLQAKRIDAVVIDEVAAQYYIAEKKAP-FVVVENSPLT 232 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAM 248 + + D + V M Sbjct: 233 EELYGIGFRKSDAKLLAEVDRILDEM 258 >gi|238765045|ref|ZP_04625981.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia kristensenii ATCC 33638] gi|238696731|gb|EEP89512.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia kristensenii ATCC 33638] Length = 263 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 100/260 (38%), Gaps = 16/260 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +IL ++ + + A L I++RG L+ + F V + +G+D Sbjct: 3 MKKRML-AILGAALILVQAPTVLADQLEQIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ + K+Q +P+++ R LQ+ ++D++ + RE +AF Sbjct: 62 IDMAHYLADKM---KLKLQLVPVSSANRVPYLQTDKVDLVISSLGKNPEREK--AIAFSR 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G K+ + +QL+G ++ V G ++ L++ +E Sbjct: 117 AYAPFFLGVFGAKEDALQQPAQLAGKTVGVTRGAVEDMVLSELAPK---DAQIKRYEDNS 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +AY + + + L L P++ + ++ SP + QG+ Sbjct: 174 TTLSAYLSGQVNYLATGN--LVVSALARQNPAQAPVAKFMLKDSPCYIGLRQGEPALKAK 231 Query: 241 VSWTHYAMVTAEELGITQKN 260 V + AE L N Sbjct: 232 VD-----ALIAEALQDQTLN 246 >gi|150391393|ref|YP_001321442.1| extracellular solute-binding protein [Alkaliphilus metalliredigens QYMF] gi|149951255|gb|ABR49783.1| extracellular solute-binding protein, family 3 [Alkaliphilus metalliredigens QYMF] Length = 280 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 91/272 (33%), Gaps = 33/272 (12%) Query: 1 MYKDFFVSILCLIILFFTSFS----------------------TNASILGDIKKRGFLKC 38 M K L +++LF + + L DI RG L Sbjct: 1 MMKKLGTVFLIMMLLFMVGCAGENVEPVETDPDMDSDANVEIDVDGGTLEDINARGSLTF 60 Query: 39 GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98 + F + +G GFD+D A++ + + + + L S + D Sbjct: 61 AMTGAYPPFNFIDTDGQLIGFDIDIANAIAEKMGVEAEPMT---VLWDGIISGLTSGRFD 117 Query: 99 ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158 ++ + T R + F Y+DG F ++ + +SQ+ A++ V GTT + Sbjct: 118 MIIGSMAITDER--LERVNFSTPYYYDGAQFFGSEELEENDLSQIEDAAVGVVTGTTFQD 175 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 L D + FE + A + R D L L + Sbjct: 176 FLVDME----NVTDILQFESDVDNMRAVQQGRSDGLITG--LLVGLHGIESFDMPLKPVG 229 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + + + AI + DT+ + V+ ++ Sbjct: 230 EPLYIEEIGIAIRKDDTDLLDAVNDALQEIIQ 261 >gi|325686267|gb|EGD28309.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 286 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 99/262 (37%), Gaps = 32/262 (12%) Query: 1 MYKD----FFVSILCLIILFFTS----------FSTNASILG------DIKKRGFLKCGI 40 M K + I+ LI++ + T S +IK+RG+++ + Sbjct: 1 MKKKNIFNIIMGIVALIVVVSAAYFGFTQPNLNSGTAGSRWSNENGVSEIKRRGYIRVAV 60 Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 L + V G G+DV R ++ + KI+++ +NA R L S + DI+ Sbjct: 61 FGDLPPYGWVNDQGKRVGYDVYLARRIAKDL---NVKIRFIQVNANNRVDTLNSNKADIV 117 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 N T R+ + F G I K I+S +L G + V GTT E Sbjct: 118 LANFTVTPERK--DVVDFAKPYMKVSVGVISPKNAPINSAQELKGKKLIVTKGTTAENYF 175 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 A + + F+ + A + R A D S LYA P V + I Sbjct: 176 -----AKQSGVNLLKFDSKTQQFNALKNGRGAALADDNSYLYAW--VKKNPKYVVGIKSI 228 Query: 221 ISKSPLAPAIIQGDTEWYNIVS 242 + +APA+ +G+ + Sbjct: 229 GPRQYVAPAVKKGNRSLLKWTN 250 >gi|264676834|ref|YP_003276740.1| cystine-binding periplasmic protein [Comamonas testosteroni CNB-2] gi|299529654|ref|ZP_07043091.1| cystine-binding periplasmic protein [Comamonas testosteroni S44] gi|262207346|gb|ACY31444.1| cystine-binding periplasmic protein [Comamonas testosteroni CNB-2] gi|298722517|gb|EFI63437.1| cystine-binding periplasmic protein [Comamonas testosteroni S44] Length = 269 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 87/288 (30%), Gaps = 31/288 (10%) Query: 1 MYKDFFVSILCLIILFFTSFST--NASILGDIKKRG-----FLKCGINTGLVGFAEVKAN 53 M K ++ + L + ++ L G++ Sbjct: 1 MKKRTLLASVALTAILAACGKNEPASNTAAAPAPAPAAAAAKLVVGLDDNFPPMGFRDEK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFD+D R ++ ++++ P++ + L K++D L R+ Sbjct: 61 NELVGFDIDMAREVAKRA---NIEVEFKPIDWNAKEAELLGKRVDALWNGLTILEERKE- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + Q I+ I + + G + Q G++ L + + Sbjct: 117 -KILFSDPYMVNKQIIIVKAGSPIKGKADMVGKIVGAQEGSSAVTALTKDKELSDKFKET 175 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +F A R D + + N +P +V+L + + Sbjct: 176 KLFGDNIAAMMDLEAGRLD--VVVVDEVVGRYYVNKKPDNYVVLAEDFGTEDYGVGFRKD 233 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGID 280 D N V+ ++ KD ++ Q++ G D Sbjct: 234 DEATRNKVNDVLT----------------EMKKDGKAAEIAQKWFGAD 265 >gi|119719815|ref|YP_920310.1| extracellular solute-binding protein [Thermofilum pendens Hrk 5] gi|119524935|gb|ABL78307.1| extracellular solute-binding protein, family 3 [Thermofilum pendens Hrk 5] Length = 279 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 54/270 (20%), Positives = 92/270 (34%), Gaps = 25/270 (9%) Query: 2 YKDF-----FVSILCLIILFFTSFS----TNASI------LGDIKKRGFLKCGINTGLVG 46 K F+++ + +L TS +AS + IK RG L G + Sbjct: 5 KKTLGSIAKFLAVFAVGLLLGTSLGYFLWHSASTTQTVSYVDKIKARGKLIVGTSADWPP 64 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V NG++ G D++ + ++ + +++ + AL++ +DI+ + Sbjct: 65 FEYVDKNGNYAGIDIEIAKRIAQELG---VQLEIKDMKFAALIEALKNGDVDIVIADMTP 121 Query: 107 TLLREISLGLAFR-PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 T RE + F P G I K I S L G I VQ GT E + K Sbjct: 122 TAEREKV--VDFSIPYYTSKGYAVITTAKSDIKSEQDLYGKKIGVQLGTIQEDWANNNLK 179 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 E+ A + DA AL + Sbjct: 180 --GKAEIKSYDRVYPEMVWALQRGDIDAMIVGDKIAEALITKEPSLKIATYVSIPTIGG- 236 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A A+ QG + +V+ ++ + E+ Sbjct: 237 -AVAVPQGAEDLKYVVNSVIEKLLESGEMN 265 >gi|288905749|ref|YP_003430971.1| ABC transporter, amino acid binding protein [Streptococcus gallolyticus UCN34] gi|306831847|ref|ZP_07465003.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|288732475|emb|CBI14047.1| Putative ABC transporter, amino acid binding protein [Streptococcus gallolyticus UCN34] gi|304426045|gb|EFM29161.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 272 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 109/279 (39%), Gaps = 19/279 (6%) Query: 1 MYKDF--------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K + +L L T + + + I+ G LK G+ + F A Sbjct: 3 MKKKLGLAILASLSLILLTLFAGKTTFADSVSEQVKKIQDAGVLKVGVKQDVPNFGYYSA 62 Query: 53 -NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G ++G +VD + ++ + + + + A+ R L + QIDIL T R+ Sbjct: 63 ETGKYEGMEVDLAKKIAKKLGVK---VSFTAVTAQTREALLDNGQIDILIATYTITEERQ 119 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 S + Y+D GF+++K KG S++ L G +I V G+TT+ + +Y +AHN+ + Sbjct: 120 ASYAI--SDPYYYDEIGFLVNKSKGYDSIADLDGLTIGVAQGSTTKSAIEEYGEAHNLSF 177 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + E+ + A+R A++ D S L I+ + + A Sbjct: 178 NFVQLGSYPELAISLYANRISAFSVDKSILTGYVSKKT-----EIIDEGFNTQEYGIAAT 232 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + + + ++ L + + Sbjct: 233 KSNQSVIDYINDLLADWKADGSLQKLYDKYDLTPATADD 271 >gi|270264104|ref|ZP_06192371.1| hypothetical protein SOD_g00350 [Serratia odorifera 4Rx13] gi|270041753|gb|EFA14850.1| hypothetical protein SOD_g00350 [Serratia odorifera 4Rx13] Length = 279 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 61/312 (19%), Positives = 102/312 (32%), Gaps = 71/312 (22%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKI 78 + +A L DIKK G ++ + F + + G+DVD A+ A+ + Sbjct: 20 GAAHADKLDDIKKAGVVRIAVFDSNPPFGYIDPQSKKLVGYDVDVADAIGKALGVK---V 76 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + N R L SK++D+++ N T R + F + GQ FI K + Sbjct: 77 ELRATNPANRIPLLVSKKVDLIAANFTITDERAK--EVNFSVPYFATGQKFIARKG-VLK 133 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + I GT E+TL +++ I ++ A R A T D Sbjct: 134 TPEDIKKLRIGADKGTVQEITLREHYPTAK----VISYDDTPLAFVALRNGNVQAITQDD 189 Query: 199 SALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 + L L + I P I+K I +G+ ++ T Sbjct: 190 AKLVGLLGNLPAAQKADFEISPFSITKEYQGVGIPKGEDRLTASINDTL----------- 238 Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE---MFDRN 313 + L KD GE ++DR Sbjct: 239 --------------------------------IKLEKD------------GEAVKIYDRW 254 Query: 314 LGNQSELKIPRG 325 G +++ PRG Sbjct: 255 FGPETKTAQPRG 266 >gi|323701356|ref|ZP_08113030.1| extracellular solute-binding protein family 3 [Desulfotomaculum nigrificans DSM 574] gi|323533615|gb|EGB23480.1| extracellular solute-binding protein family 3 [Desulfotomaculum nigrificans DSM 574] Length = 278 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 83/229 (36%), Gaps = 13/229 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 T + IK++G + G++ + +G +GFD+D ++ + KIQ+ Sbjct: 39 QTEKNTWEQIKEKGVMVVGLDNTFAPMGF-EKDGKLQGFDIDMGEEMAKRLG---IKIQW 94 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISS 139 P AL SK+ D++ T R+ + F DGQ + K G ++ Sbjct: 95 QPTQWDGVIPALLSKRFDVVISGMTITDERKK--QIDFSIPYVADGQVMAVKKGTTGFNT 152 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G + Q ++ E + +++ E A + R D Sbjct: 153 AADLKGKVVGTQENSSGEEAVNKIEGIK----EKKLYKTYPEAFADLQIGRIPVVVVDRV 208 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 A +RP ++ + +++ P I + D E + M Sbjct: 209 T--AEYYLAERPGAFEVVGEQLTQEPFGIGIRKTDPELKAAIDKVLTDM 255 >gi|220920915|ref|YP_002496216.1| family 3 extracellular solute-binding protein [Methylobacterium nodulans ORS 2060] gi|219945521|gb|ACL55913.1| extracellular solute-binding protein family 3 [Methylobacterium nodulans ORS 2060] Length = 267 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 93/246 (37%), Gaps = 15/246 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59 M +++ + +L + S A L DIKKRG L C F+ G+ Sbjct: 1 MK---TLTLSLVALLSLGAVSARADQLDDIKKRGTLVCATLGTTEPFSFQDLTTRQTAGY 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVDFC+A++ A+ ++ + + R L ++D+++ N +T R + + Sbjct: 58 DVDFCKAIADALGVK---LELKLVAVEARIPELSQGRVDVVAANLGYTPERAE--QIDYS 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y Q + +G + S L G + G+T+EL + + + + F+ Sbjct: 113 DFYYVSQQKLLARDAEGFKAASDLGGKRVSAIKGSTSELAVKNSIPSA----QTVTFQDA 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A + + A+ L + E IL + + P + +G+ Sbjct: 169 PAAFLAMQQRKVAAFAASEIMLVKFRSQAGTGLE--ILEPSLMREPWGIGVRKGEKSLLA 226 Query: 240 IVSWTH 245 V+ Sbjct: 227 AVNKAL 232 >gi|84497113|ref|ZP_00995935.1| putative transporter substrate-binding protein [Janibacter sp. HTCC2649] gi|84382001|gb|EAP97883.1| putative transporter substrate-binding protein [Janibacter sp. HTCC2649] Length = 324 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 53/234 (22%), Positives = 91/234 (38%), Gaps = 9/234 (3%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAI 71 L S +AS +G IK RG L G++ G +GFD+D + ++ AI Sbjct: 62 GALPAPSGIPSASTMGKIKARGRLIAGVSADTRLLGSRNPLLGRIEGFDIDLVQQIADAI 121 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 +K++ + A +R LQ+ Q+D++ RN T + +AF Y GQ ++ Sbjct: 122 LGPNAKVELRVITAADRLPVLQNHQVDVVVRNMTITC--DRWKTIAFSAEYYRAGQKILI 179 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 K I+ ++ L+G +C GT++ L + E + + Sbjct: 180 RKGSTITGLASLAGKRVCAPTGTSSLDNLVRLAPKA----IAVPATTHTECLVNLQQGKV 235 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 +A TGD + L L P V+ + P I + V+ Sbjct: 236 EAITGDDTVLAGLASQ--DPYAVVLSEKAFTAEPYGVGIAADQVDLVKFVNTVL 287 >gi|77415016|ref|ZP_00791094.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 515] gi|77158934|gb|EAO70167.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 515] Length = 200 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 10/200 (5%) Query: 1 MYKDFFVSILCL----IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGD 55 M + +++ L I L F ST+A+ L +IKK G LK G+ + F A Sbjct: 1 MLRRKRLTLYLLSCIFIFLLFYPNSTSANQLSEIKKSGVLKVGVKQDVPNFGYHNAETNQ 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 ++G ++D + ++ ++ P ++P A+ R + + QIDIL T R+ + Sbjct: 61 YEGMEIDIAKKIAKSLGVKP---VFVPTTAQTREPLMDNGQIDILIATYTITPERKANYN 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + Y D GF++ K I ++ +L G I V G TT++ L Y K H +K+ Sbjct: 118 I--SKAYYHDEIGFLVRKNSHIKTIKELDGKHIGVAQGATTKVNLEKYAKEHKLKFSYAX 175 Query: 176 FERVEEIDAAYRAHRCDAYT 195 E+ + A+R DA++ Sbjct: 176 LGSFPELAISLYANRIDAFS 195 >gi|229125463|ref|ZP_04254520.1| Amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 95/8201] gi|228657991|gb|EEL13774.1| Amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 95/8201] Length = 262 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 82/249 (32%), Gaps = 14/249 (5%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + I+ + T S K+ L GI+ N GF Sbjct: 6 MKRLTTIILIIAAVFAVITGCSKP-----KEKEDNTLVIGIDDKFAPMGFRDENNKIVGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D+ +A + + +K+++ P++ K + L S +ID++ T + + F Sbjct: 61 DIDYAKAAAEKLG---TKVKFQPIDWKTKESELSSGRIDLIWNGYTITD--DRKNKVLFT 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q + ++ ++ L + +Q+ ++ L +K F Sbjct: 116 KPYLKNAQVVVTLSNSPLTKLNNLEAKVVGLQSLSSASDALNSNPIKSKIK-TVTEFADN 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ R DA D + IL + +S + +G+ Sbjct: 175 VSALNDLKSGRLDAVVIDEVVINYYMTKEKD--TFKILDESLSPEEYGVGVKKGNDALLK 232 Query: 240 IVSWTHYAM 248 + M Sbjct: 233 KLQKALDEM 241 >gi|257461484|ref|ZP_05626580.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257441207|gb|EEV16354.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 268 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 54/246 (21%), Positives = 97/246 (39%), Gaps = 18/246 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ +L I A+ L IK+ ++ + F+ V NG ++GFD Sbjct: 1 MKKSLFLILLSCIFAL-------ANSLSQIKQSKVIRIAVYENEPPFSRVTDNG-FEGFD 52 Query: 61 VDFCRALSSAIFDD-PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 V+ A+ I D +I+ +P++A+ RF ++Q+ Q D+L T R+ F Sbjct: 53 VELANAIGGKILGDTGGRIELIPVSAQARFPSIQNNQADMLIAAASVTEERKK--NYEFS 110 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G + K I +S L G + V G+T E F + Y+ + + Sbjct: 111 MPYLSVNSGVLTRKSDNIQKMSDLRGKKVGVIRGSTGEA-----FMQKDGGYNLVYCKNS 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + ++ D D L+ + PS V + + L A+ +G+ + Sbjct: 166 SDCYKRLKSGEIDGACDDN--LFVMVYPVADPSVEVNIKSLGENVFLGIAMQKGNADLAE 223 Query: 240 IVSWTH 245 V+ Sbjct: 224 AVNQAL 229 >gi|221197837|ref|ZP_03570883.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2M] gi|221204605|ref|ZP_03577622.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2] gi|221213036|ref|ZP_03586012.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD1] gi|221167249|gb|EED99719.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD1] gi|221175462|gb|EEE07892.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2] gi|221181769|gb|EEE14170.1| extracellular solute-binding protein, family 3 [Burkholderia multivorans CGD2M] Length = 264 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 83/251 (33%), Gaps = 17/251 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +L ++ + + A +L +K+RG L+ G+ F G+ Sbjct: 1 MKFALLKKLLVAGLIGTSFAAATAHAADLLDQVKQRGTLRIGLEGTFPPFNSKNPQGELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + P ++ LQ+ + D++ T R+ + L Sbjct: 61 GFDVDIAKAVAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDKRKET--LD 115 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F P + I K S+ L G + V GT Sbjct: 116 FSPAYTYSSAQLIQRKDDTRQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKT 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E A R DA D L L + P ++ S +P +G+ Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNP 228 Query: 236 EWYNIVSWTHY 246 ++ + Sbjct: 229 KFQKAIDDAMT 239 >gi|199599083|ref|ZP_03212489.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] gi|258509003|ref|YP_003171754.1| ABC transporter amino acid-binding periplasmic protein [Lactobacillus rhamnosus GG] gi|199590046|gb|EDY98146.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] gi|257148930|emb|CAR87903.1| ABC transporter, amino acid-binding periplasmic protein [Lactobacillus rhamnosus GG] gi|259650296|dbj|BAI42458.1| amino acid ABC transporter substrate binding component [Lactobacillus rhamnosus GG] Length = 274 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 81/226 (35%), Gaps = 9/226 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + IL + K + G+ F + G +GFDVD +A++ I Q Sbjct: 29 ADRDILANAKATNTIIWGVKADTRLFGLMNIKTGKIEGFDVDMAKAITKQILGKKGNAQL 88 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + + R ++ +D + T R+ L F + + GQ ++ K I SV Sbjct: 89 VQVTSDTRVPMIKGGNLDAVIATMTITPERQKI--LDFSDVYFNAGQSLLVKKGSPIKSV 146 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L + + + D K + + A ++ + DA T D Sbjct: 147 KDLKKGTKVIGVQGS---NSVDNVKKAAPDTTVLQLADYAQAFTALKSGQGDALTTDNGI 203 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 LY + + +++ +K P AI +G + N V+ Sbjct: 204 LYGMSEQDKN---YIVTGGTFTKEPYGIAINKGQKPFVNAVNKAIK 246 >gi|226366164|ref|YP_002783947.1| glutamate ABC transporter glutamate-binding protein [Rhodococcus opacus B4] gi|226244654|dbj|BAH55002.1| glutamate ABC transporter glutamate-binding protein [Rhodococcus opacus B4] Length = 277 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 82/246 (33%), Gaps = 9/246 (3%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + ++ L ++ G L GI G +G + GFDV+ Sbjct: 11 IGVMALAVVASACGGGEEKSASQSASEGKLTVGIKYDQPGLGLRNPDGSFSGFDVEVAEY 70 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + P I++ + +R +Q+ ++D + T R+ + F + G Sbjct: 71 IAGKLGVAPENIEFKESPSAQRETLIQNGEVDYIVATYSITDARKE--KVDFAGPYFIAG 128 Query: 127 QGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 Q ++ + + G +C G+T + D + F+ Sbjct: 129 QSLLVKSDNTDITGPESLNGGKKLCSVTGSTPAQKVKDQYAQ---DVQLQEFDTYSACVE 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A R DA T D L P E ++ ++ + +GD E ++ Sbjct: 186 ALRNGAVDAVTTDDIILAGYAAQY--PGELKVVGAPFTQERYGVGLAKGDDETRAKINDA 243 Query: 245 HYAMVT 250 AM+ Sbjct: 244 IEAMIA 249 >gi|289624706|ref|ZP_06457660.1| cystine transporter subunit [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650262|ref|ZP_06481605.1| cystine transporter subunit [Pseudomonas syringae pv. aesculi str. 2250] gi|330865667|gb|EGH00376.1| cystine transporter subunit [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 265 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 79/245 (32%), Gaps = 10/245 (4%) Query: 2 YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S L L++ + L IK G L G+ F+ V NG GF+ Sbjct: 7 RRTFLFSALSLMLGTGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + + P AL SK++D++ + R+ + Sbjct: 67 VEFSEALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISEERKKKYDFSEPY 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + I + L+G + V GT E L K + ++ Sbjct: 124 TVSGIQALVLKKNEDTIKTAKDLTGKKVGVGLGTNYEQWL----KENVPGAIVKTYDDDP 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 R DA D A + V D S+ A+ +G+ E Sbjct: 180 SKIQDLSVGRIDAILVDRLAALEMATKTKNK--LVPAGDAFSRQESGIALRKGEPELQAA 237 Query: 241 VSWTH 245 + Sbjct: 238 IDKAI 242 >gi|146308593|ref|YP_001189058.1| cationic amino acid ABC transporter, periplasmic binding protein [Pseudomonas mendocina ymp] gi|145576794|gb|ABP86326.1| L-ornithine-binding protein / L-arginine-binding protein [Pseudomonas mendocina ymp] Length = 258 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 93/270 (34%), Gaps = 23/270 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ + L ++ + F+ + L+ GI FA +ANG+ GFD Sbjct: 1 MKKIAWLGAIALSLIASSPFAADKP----------LRLGIEAAYPPFAYKEANGEIAGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + Q++ +L+ K++D + + T R + F Sbjct: 51 VDIGNALCAEM---KVQCQWVEQEFDGLIPSLKVKKVDAILSSMTITDERRK--SVDFTG 105 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y+ +M + + + L G I VQ TTT+ + A + + Sbjct: 106 KYYYSPARLVMKEGSTVDADFANLKGKRIGVQRATTTDRFASSVMAAQG--VQVVRYSSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-----PDIISKSPLAPAIIQGD 234 EI + R D D + L + A+ +GD Sbjct: 164 NEIYLDLISGRLDGTLADAIPVEEGFLKTPNGKGFAFVGPSFTDPAYFGEGAGIAVRKGD 223 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQV 264 +E ++ A+ + E Q+ Sbjct: 224 SELLGKLNAAIAAIRASGEYQQIQQRYFSF 253 >gi|317407117|gb|EFV87121.1| amino acid ABC transporter solute-binding protein [Achromobacter xylosoxidans C54] Length = 263 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 87/253 (34%), Gaps = 11/253 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGDWK 57 M K V ++ + ++ + + + G++ AN Sbjct: 1 MKKLTAVLLVSATTMLTACGPSDNAPAASAQAPAAARKVVVGLDDNFPPMGFRDANNQIV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD + S + ++++ P++ + L K++D+L T R+ ++ Sbjct: 61 GFDVDMAKEASKRLG---LEVEFKPIDWSAKEAELNGKRVDVLWNGLTITEERKK--NIS 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + Q I+ + + + L+G + Q G++ +A A F Sbjct: 116 FTAPYMANHQIIIVGNASPVKAKADLAGKVVGAQDGSSATDAIAKDPVA-GSIKEVKKFG 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A R DA D + L + R E+ +L D + + DTE Sbjct: 175 DNVTALMDLAAGRLDAIVVDE--VVGRYLISKRAGEYRVLDDNFGTEDYGVGVRKDDTEL 232 Query: 238 YNIVSWTHYAMVT 250 + T +M Sbjct: 233 LGKLDKTLDSMKQ 245 >gi|317133176|ref|YP_004092490.1| extracellular solute-binding protein family 3 [Ethanoligenens harbinense YUAN-3] gi|315471155|gb|ADU27759.1| extracellular solute-binding protein family 3 [Ethanoligenens harbinense YUAN-3] Length = 270 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 93/258 (36%), Gaps = 17/258 (6%) Query: 2 YKDFFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55 K +++ + + S S++ L IKK G L G + F Sbjct: 6 KKISSIALASALCVTMASCKSSSSSTDKLDAIKKAGVLVVGTSADYPPFEFHKQQNGQDK 65 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G DV+ ++ I IQ+ ++ ALQS +ID++ T RE Sbjct: 66 IMGADVEIAEQIAKKIGVK---IQWQDMDFDGLLPALQSGKIDMIIAGMIDTPEREK--A 120 Query: 116 LAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F Y I+ K S +S LSG I VQ GTT + + + + + Sbjct: 121 VDFSHKYYLSTDQAIIRKDDLSKYSKLSDLSGKHIGVQLGTTQQDDMKKWLPSGDY---- 176 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + ++ ++ + DA + + A N I ++ P Sbjct: 177 VALGKDTDLILELKSKKVDAVILEEPIVKAYVSQNSDLVTANISFPKATQGPAVAVQKGN 236 Query: 234 DTEWYNIVSWTHYAMVTA 251 D E+ + ++ +V++ Sbjct: 237 DKEFLSTINSVVDGLVSS 254 >gi|317047031|ref|YP_004114679.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316948648|gb|ADU68123.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 261 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 93/245 (37%), Gaps = 11/245 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ ++ S A L DI+KRG ++ + F V + +G+D Sbjct: 1 MKK-VLMAVAGAALMMAQVGSAMADQLQDIQKRGVIRIAVPQDFPPFGSVGTDLQPQGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + L+ + K+Q +P+++ R LQ+ ++D++ + RE + F Sbjct: 60 IDMAKYLAKEM---KLKLQLVPVSSANRVPYLQTDKVDLVISSMGKNAEREKV--IDFSR 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G K + I + LSG SI V G ++ L +E Sbjct: 115 AYAPFFLGVFGPKGEEIKDAAALSGKSIGVTRGAVEDMVLTGVAPK---DAEVKRYEDNN 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +AY + + + A+ P++ + ++ SP + + + + Sbjct: 172 TTLSAYLSGQVQFIATGNLVVAAIARQ--NPAKAPVPQFMLKDSPCFIGLKKDEPALKDK 229 Query: 241 VSWTH 245 V+ Sbjct: 230 VNALI 234 >gi|317494652|ref|ZP_07953064.1| extracellular solute-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917254|gb|EFV38601.1| extracellular solute-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 277 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 51/227 (22%), Positives = 84/227 (37%), Gaps = 13/227 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQY 80 +A L DI+K G ++ + F V G+DVD A+ A+ ++ Sbjct: 21 AHADKLDDIQKAGVVRVAVFDSNPPFGYVDPQTKKLVGYDVDVADAIGKALGVK---VEL 77 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 N R L SK++D+++ N T R + F + GQ FI K + Sbjct: 78 RATNPANRIPLLASKKVDLIAANFTITPERAK--EVNFSVPYFRTGQKFIARKG-VLKQP 134 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 ++ I GT E+TL D + I ++ AA R A T D + Sbjct: 135 DDIAKLRIGADKGTVQEITLRDKYPTAK----VISYDDTPLAFAALRNGNVQAITQDDAK 190 Query: 201 LYALKLTNDRP--SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L L ++ I P I+K + +G+ + V+ Sbjct: 191 LVGLLANVPDAAKADFEISPFSITKEYQGIGLPKGEDRLTDKVNTAL 237 >gi|171780123|ref|ZP_02921027.1| hypothetical protein STRINF_01911 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281471|gb|EDT46906.1| hypothetical protein STRINF_01911 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 272 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 108/279 (38%), Gaps = 19/279 (6%) Query: 1 MYKDF--------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K + +L L T + + + I+ G LK G+ + F A Sbjct: 3 MKKKLGLAILASLSLILLTLFTGKTTFADSVSEQVKKIQDAGVLKVGVKQDVPNFGYYSA 62 Query: 53 -NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G ++G +VD + ++ + + + + + R L + QIDIL T R+ Sbjct: 63 ETGKYEGMEVDLAKKIAKKLGVK---VSFTAVTPQTREALLDNGQIDILIATYTITEERQ 119 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 S + Y+D GF+++K KG S++ L G +I V G+TT+ + +Y +AHN+ + Sbjct: 120 ASYAI--SDPYYYDEIGFLVNKSKGYDSIADLDGLTIGVAQGSTTKSAIEEYGEAHNLSF 177 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + E+ + A+R A++ D S L I+ + + A Sbjct: 178 NFVQLGSYPELAISLYANRISAFSVDKSILTGYVSKKT-----EIIDEGFNTQEYGIAAT 232 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + + + ++ L + + Sbjct: 233 KSNQSVIDYINDLLADWKADGSLQKLYDKYDLTPATADD 271 >gi|320095228|ref|ZP_08026929.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Actinomyces sp. oral taxon 178 str. F0338] gi|319977842|gb|EFW09484.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Actinomyces sp. oral taxon 178 str. F0338] Length = 302 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 97/220 (44%), Gaps = 11/220 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 IK+ G + GI + F + A+G G+DV + +++ + +Y+P++A Sbjct: 50 TPEQIKEAGEITIGIFSDKAPFGYIDADGKPAGYDVVYGDRIAADLGVTA---KYVPVDA 106 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 R LQS ++DI N T R + F + G + I+ VSQL+G Sbjct: 107 AARTEVLQSNKVDITLANFTVTPERAE--KVDFANPYFKVSLGVVSPASAEITDVSQLAG 164 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ V GTT E F+A++ + +++ + A R DA++ D + + A Sbjct: 165 KTLIVTKGTTAEAY----FEANHPEVELQKYDQYSDAYQALEDGRGDAFSTDNTEVIAWA 220 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + P V + + S +A A+ +G++ + ++ Sbjct: 221 IA--HPGFGVGIKSLGETSYIAAAVKKGNSALLDWLNNQL 258 >gi|313885660|ref|ZP_07819409.1| ABC transporter glutamine-binding protein GlnH [Eremococcus coleocola ACS-139-V-Col8] gi|312619025|gb|EFR30465.1| ABC transporter glutamine-binding protein GlnH [Eremococcus coleocola ACS-139-V-Col8] Length = 278 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 98/252 (38%), Gaps = 16/252 (6%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKR-----GFLKCGINTGLVGFAEVK-ANGDWK 57 ++L + + S + + DI +R + GI F NG+ + Sbjct: 13 SLIFTLLVITFVLVFSKAGTSVSQPDIVQRLSNKDQTIVWGIKNDTKLFGFYNIENGEIE 72 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D + L+ + D +++ + +K R L++ ID + R+ + Sbjct: 73 GFDIDVAKELTKRLTGDSKHAKFVEVTSKTRIPLLRNGNIDAIIATMTINEARKKV--VD 130 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICV-QAGTTTELTLADYFKAHNMKYHPIVF 176 F + GQ ++ K I+S+ L ++ V G+T+ + I Sbjct: 131 FTDTYFDAGQSLLVAKDSKINSIDNLDASTTVVSVKGSTSSQNIKKLAPQAK----LIEL 186 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E E A +A + DA T D + L L + P + + + ++ P A+ + + Sbjct: 187 ETYAEGLTALKAGQGDALTTDNAILLGLIS--ENP-DFRLAGENFTEEPYGIAVNKNQAD 243 Query: 237 WYNIVSWTHYAM 248 + N ++ AM Sbjct: 244 FKNQLNQALAAM 255 >gi|238794027|ref|ZP_04637645.1| Cystine-binding periplasmic protein [Yersinia intermedia ATCC 29909] gi|238726659|gb|EEQ18195.1| Cystine-binding periplasmic protein [Yersinia intermedia ATCC 29909] Length = 262 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 81/251 (32%), Gaps = 15/251 (5%) Query: 2 YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + ++ + + + +L +K RG L G+ F+ +G GF Sbjct: 3 RRRVVLGMVAVALATGLNVKSYAAGDLLSQVKDRGTLIVGLEGTYPPFSFQGEDGKLTGF 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VDF AL+ + + P +L+SK+ID+ + R+ F Sbjct: 63 EVDFANALAEHMGVKA---KITPTKWDGMLASLESKRIDVAINQVTISEERKK--KYDFS 117 Query: 120 PITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G + K + L G + V G+ E L D K ++ Sbjct: 118 TPYTISGIQVLTKKGNEGNFTKPEDLEGKKVGVGLGSNYEQWLRDNLK----GVDIRTYD 173 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R R DA D L AL L + ++ A+ + + E Sbjct: 174 DDPTKYQDLRVGRTDAILVDR--LAALDLVKKTGGTLAVAGSAFARQESGVALRKNNPEL 231 Query: 238 YNIVSWTHYAM 248 ++ M Sbjct: 232 LAAINQAITEM 242 >gi|326779309|ref|ZP_08238574.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces cf. griseus XylebKG-1] gi|326659642|gb|EGE44488.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces cf. griseus XylebKG-1] Length = 346 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 80/242 (33%), Gaps = 15/242 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFD 73 S + + IK+RG L G++ + + +GFD+D RA++ + Sbjct: 71 ASLPPSSADGPGIEKIKQRGKLIAGVDQNSFRWGYRNPEARELEGFDIDLVRAIAKDVLG 130 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DP + + + +R AL++ ++D++ R R ++F + GQ + K Sbjct: 131 DPDAVIFRAIPTNQRIAALENDRVDVVVRTMTINCKR--LEQVSFSTAYFQAGQQVLAPK 188 Query: 134 KKGISSVSQ-LSGASICVQAGTTTELTL---------ADYFKAHNMKYHPIVFERVEEID 183 I+ L G +C G+T L D F + + Sbjct: 189 GSTITGYDASLKGKRVCSAEGSTAYEALEKKSFGALYKDDFDGTARDPDLLTVPNQLDCL 248 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + DA D + P+ + + A +G + V+ Sbjct: 249 VRLQLGEVDAVVTDNALAAGQAAQ--DPAVELKGKAPFTTEYYGVATKKGADDLVARVNK 306 Query: 244 TH 245 Sbjct: 307 VL 308 >gi|331701269|ref|YP_004398228.1| ABC transporter periplasmic subunit [Lactobacillus buchneri NRRL B-30929] gi|329128612|gb|AEB73165.1| ABC-type transporter, periplasmic subunit family 3 [Lactobacillus buchneri NRRL B-30929] Length = 287 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 78/233 (33%), Gaps = 8/233 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 + K+ + G++ V +G G+DVD RA+ K+ + P++ Sbjct: 39 DTWSTVSKQKRIVVGLDDSFVPMGFQTKSGKIVGYDVDLARAVFKQYG---IKVDFQPID 95 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 L++ ID++ R + F + Q + K + I+S + + Sbjct: 96 WSMNVTELRNGTIDLIWNGFSINPQRAK--KITFSEPYLINDQVLVSKKNQHINSFADMK 153 Query: 145 GASICVQAGTTTELTLADYFKAHNMKY---HPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 G VQ+G+ + + + K K PI+++ + A+R D Sbjct: 154 GKVAGVQSGSAGAMDIDNQPKLLKDKIKGHEPILYDTFTDAFIDLNANRIQGLLIDSIYA 213 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 S +P K + +GDT + + EL Sbjct: 214 GYYLEHQPNQSSFKSIPSEFPKEEYGVGMRKGDTVLKRKIDQGLNRLAKNGEL 266 >gi|296141428|ref|YP_003648671.1| extracellular solute-binding protein family 3 [Tsukamurella paurometabola DSM 20162] gi|296029562|gb|ADG80332.1| extracellular solute-binding protein family 3 [Tsukamurella paurometabola DSM 20162] Length = 326 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 88/234 (37%), Gaps = 10/234 (4%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAI 71 L + + +I RG L GI+ G + G+ KGFD D +++AI Sbjct: 68 SSLPPAGQMAPGTTMAEIFDRGRLVVGIDIGSNLLSFRDPITGEIKGFDADIAHQIAAAI 127 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 F DP+++ + L+ ER AL +D++ + T R + F + Q + Sbjct: 128 FGDPNRVHFRILSTAERQQALIDGTVDVVVKTMSATCDRAK--QVDFSATYFIAQQRILA 185 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 + I++V LSG +C GTT+ + + I + + + + Sbjct: 186 PRGAPINTVGDLSGRRVCEVRGTTSLDRVRRLVPSA----TVIAADSWSDCLVMLQQQQV 241 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 DA + D + L L+ + + + A I + + ++ Sbjct: 242 DAVSTDDAILAGLEDQDPN---LTVTGPSMGLEYYAVGIGKNRPDLVRFINGVL 292 >gi|289674587|ref|ZP_06495477.1| cystine transporter subunit [Pseudomonas syringae pv. syringae FF5] gi|330938696|gb|EGH42254.1| cystine transporter subunit [Pseudomonas syringae pv. pisi str. 1704B] Length = 265 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 86/245 (35%), Gaps = 10/245 (4%) Query: 2 YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S + L++ + L IK G L G+ F+ V +G GF+ Sbjct: 7 RRTFLFSAMGLMLSAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + + P AL SK++D++ + R+ + Sbjct: 67 VEFSEALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSEPY 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + I S L+G + V GT E ++ KA+ ++ Sbjct: 124 TVSGIQALVLKKNEDAIKSAKDLTGKKVGVGLGTNYE----EWLKANVPGAIVKTYDDDP 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 R DA D L AL++ ++ V D S+ A+ +G+ E Sbjct: 180 SKIQDLSVGRIDAILVDR--LAALEMAAKTKNKLVPAGDAFSRQESGIALRKGEPELLAA 237 Query: 241 VSWTH 245 + Sbjct: 238 IDKAI 242 >gi|152970318|ref|YP_001335427.1| cysteine ABC transporter periplasmic substrate binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206576516|ref|YP_002238435.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Klebsiella pneumoniae 342] gi|238894802|ref|YP_002919536.1| cysteine ABC transport system periplasmic substrate-binding component [Klebsiella pneumoniae NTUH-K2044] gi|262044440|ref|ZP_06017501.1| amino acid ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|290509459|ref|ZP_06548830.1| polar amino acid transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|330010551|ref|ZP_08306784.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella sp. MS 92-3] gi|150955167|gb|ABR77197.1| cysteine transport protein (ABC superfamily, peri_bind) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206565574|gb|ACI07350.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Klebsiella pneumoniae 342] gi|238547118|dbj|BAH63469.1| cysteine ABC transport system periplasmic substrate-binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259038220|gb|EEW39430.1| amino acid ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|289778853|gb|EFD86850.1| polar amino acid transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|328534488|gb|EGF61076.1| ABC transporter, substrate-binding protein, family 3 [Klebsiella sp. MS 92-3] Length = 261 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 89/245 (36%), Gaps = 11/245 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L + + A L DI+KRG ++ + F V + +G+D Sbjct: 1 MKK-LLIALAGAACLLSSVSAAQADQLQDIEKRGVIRIAVPQDFPPFGSVGTDLQPQGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D R L+ ++ K+Q +P+ + R LQ+ ++D++ + RE + F Sbjct: 60 IDMARYLAKSM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKV--IDFSR 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G K + + LSG SI V G ++ L +E Sbjct: 115 AYAPFFLGVFGPKGAELKDAAALSGKSIGVTRGAVEDMVLTSVAPQA---AQIKRYEDNN 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +AY + + + A+ + + + ++ SP + + + Sbjct: 172 TTLSAYLSGQVQYVATGNLVVAAI--SRQNADKAPVPSFMLKDSPCFIGLKKNEPALKAK 229 Query: 241 VSWTH 245 V Sbjct: 230 VDTLI 234 >gi|187930702|ref|YP_001901189.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|187727592|gb|ACD28757.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] Length = 302 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 90/245 (36%), Gaps = 8/245 (3%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA----LS 68 F ++ L I+ G + + F+ + + G+ +D C + Sbjct: 21 TAFFPSNAVAATPALDRIRDSGTVHVAYREDSIPFSYLDGS-KPVGYAIDICSRLIDSIK 79 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +++ K+QY+P+ A R + S + D+ +T RE +AF Y Sbjct: 80 TSLKRPDLKVQYVPVTAATRMDVVASGKADLECGST--NNSRERREKVAFTIPHYITKGR 137 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ I L+G ++ V A +T LA M + + A Sbjct: 138 MLVRTGSPIQQWEDLNGKTV-VAARGSTNADLARKLNETGMTMQVVDANDLRSAFAMLAD 196 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R +A+ GD L ++ T P+++ + S A + + D E+ ++ + + Sbjct: 197 GRANAFAGDDILLSGMRATAKNPADYRLAGKTQLVSSYAIMLSKQDPEFKKLIDQSMTRL 256 Query: 249 VTAEE 253 + E Sbjct: 257 IVDGE 261 >gi|191638947|ref|YP_001988113.1| Glutamine ABC transporter, substrate binding protein [Lactobacillus casei BL23] gi|190713249|emb|CAQ67255.1| Glutamine ABC transporter, substrate binding protein [Lactobacillus casei BL23] gi|327382995|gb|AEA54471.1| Sugar binding protein [Lactobacillus casei LC2W] gi|327386183|gb|AEA57657.1| Sugar binding protein [Lactobacillus casei BD-II] Length = 274 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 80/226 (35%), Gaps = 9/226 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + IL K + G+ F + G +GFDVD +A++ I K Q Sbjct: 29 ADRDILTTAKTTNTIFWGVKADTRLFGLMDIKTGKIEGFDVDMAKAITKQILGSKGKAQL 88 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + + R ++ +D + T R+ L F + + GQ ++ K I SV Sbjct: 89 VQVTSDTRVPMIKGGNVDAVIATMTITPERQKI--LDFSDVYFNAGQSILVKKGSPIKSV 146 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L + + + D K + + A ++ + DA T D Sbjct: 147 KDLKKGTKVIGVQGS---NSVDNVKKAAPDTTVLQLSDYAQAFTALKSGQGDALTTDNGI 203 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 LY + + +++ +K P AI +G + V+ Sbjct: 204 LYGMSEQDPN---YIVTGGTFTKEPYGIAINKGQKPFVQAVNKAIK 246 >gi|209515706|ref|ZP_03264570.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209503942|gb|EEA03934.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 264 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 80/237 (33%), Gaps = 14/237 (5%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 + F + A +L +K+RG L+ G+ F +G+ G+DVD +A+++ + Sbjct: 15 IGASFTAVAAHAADLLDQVKQRGTLRVGLEGTFPPFNSKAPSGELVGYDVDIAKAVAAKL 74 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 P ++ LQ+ + D++ T R+ L F P + I Sbjct: 75 GVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDARK--QTLDFSPAYTYSAAQLIQ 129 Query: 132 HKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 K +S+ L G + V GT + E A Sbjct: 130 RKDDTRQFTSLEDLKGKKLGVGLGTNYMD-----MAKAVPGIDVKTYPGAPEYLRDLAAG 184 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 R DA D L L ++ P ++ +P +G+ ++ + Sbjct: 185 RLDAALNDRLMLAYLLKNSNLP--LRTGANVGPGNPSGIPFKKGNPQFAKAIDDAMT 239 >gi|104773439|ref|YP_618419.1| amino acid ABC transporter substrate-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422520|emb|CAI97094.1| Amino acid ABC transporter, substrate binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 286 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 99/262 (37%), Gaps = 32/262 (12%) Query: 1 MYKD----FFVSILCLIILFFTS----------FSTNASILG------DIKKRGFLKCGI 40 M K + I+ LI++ + T S +IK+RG+++ + Sbjct: 1 MKKKNIFNIIMGIVALIVVVSAAYFGFTQPNLNSGTAGSRWSNENGVSEIKRRGYIRVAV 60 Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 L + V G G+DV R ++ + KI+++ +NA R L S + DI+ Sbjct: 61 FGDLPPYGWVNEQGKRVGYDVYLARRIAKDL---NVKIRFIQVNANNRVDTLNSNKADIV 117 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 N T R+ + F G I K I+S +L G + V GTT E Sbjct: 118 LANFTVTPERK--DVVDFAKPYMKVSVGVISPKNAPINSAQKLKGKKLIVTKGTTAENYF 175 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 A + + F+ + A + R A D S LYA P V + I Sbjct: 176 -----AKQSGVNLLKFDSKTQQFNALKNGRGAALADDNSYLYAW--VKKNPKYVVGIKSI 228 Query: 221 ISKSPLAPAIIQGDTEWYNIVS 242 + +APA+ +G+ + Sbjct: 229 GPRQYVAPAVKKGNRSLLKWTN 250 >gi|317509500|ref|ZP_07967113.1| extracellular solute-binding protein, family 3 [Segniliparus rugosus ATCC BAA-974] gi|316252204|gb|EFV11661.1| extracellular solute-binding protein, family 3 [Segniliparus rugosus ATCC BAA-974] Length = 335 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 46/226 (20%), Positives = 88/226 (38%), Gaps = 12/226 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 L I RG L G++ G F+ A G+ KGFDV R ++ + DPS+++Y Sbjct: 79 GGRLDRILARGRLVVGLDQGTYPFSYRDTATGEMKGFDVAMAREIAGGMLGDPSRVEYRI 138 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 +++ R AL++ +D++ + T R + F + Q + +S + Sbjct: 139 ISSAGRTTALENDTVDLVVKTMSITCERAK--DVTFSEPYFETDQRVMAATNANATSFTD 196 Query: 143 ---LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L +++C GTT+ F + + A + DA T D S Sbjct: 197 RKILGESTVCAARGTTSIAQFHHLFPTAK----ILGTTTWADCLVAIQQGSVDAITSDES 252 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 LY P+ + + + + + +G+ E +++ Sbjct: 253 ILYGFYDQ--DPNLYFLSAIQLGREVYGVGVHKGEEELQRVINGII 296 >gi|28872292|ref|NP_794911.1| cystine ABC transporter periplasmic cystine binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213969395|ref|ZP_03397532.1| cystine ABC transporter, periplasmic cystine binding protein [Pseudomonas syringae pv. tomato T1] gi|301386654|ref|ZP_07235072.1| cystine transporter subunit [Pseudomonas syringae pv. tomato Max13] gi|302061131|ref|ZP_07252672.1| cystine transporter subunit [Pseudomonas syringae pv. tomato K40] gi|302132933|ref|ZP_07258923.1| cystine transporter subunit [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28855546|gb|AAO58606.1| cystine ABC transporter, periplasmic cystine binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213925766|gb|EEB59324.1| cystine ABC transporter, periplasmic cystine binding protein [Pseudomonas syringae pv. tomato T1] gi|331016086|gb|EGH96142.1| cystine transporter subunit [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 268 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 79/246 (32%), Gaps = 9/246 (3%) Query: 2 YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S L L++ + L IK G L G+ F+ V NG GF+ Sbjct: 7 RRTFLFSALGLMLGTGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLSGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + + P AL SK++D++ + R+ + Sbjct: 67 VEFSEALAKELGVKA---RIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSEPY 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + I S + LSG + V GT E L KA+ +E Sbjct: 124 TISGIQALVLKKNADTIKSANDLSGKKVGVGLGTNYEQWL----KANVPGAEIKTYEDDP 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA D A + E S+ A+ +G+ E Sbjct: 180 TKIQDLSVGRIDAILVDRLAALEIAAKTKDTKRELAPAGAAFSRQESGIALRKGEPELLA 239 Query: 240 IVSWTH 245 + Sbjct: 240 AIDKAI 245 >gi|183601790|ref|ZP_02963160.1| glutamate-binding protein of ABC transporter system [Bifidobacterium animalis subsp. lactis HN019] gi|241190712|ref|YP_002968106.1| amino acid ABC transporter periplasmic component [Bifidobacterium animalis subsp. lactis Bl-04] gi|183219396|gb|EDT90037.1| glutamate-binding protein of ABC transporter system [Bifidobacterium animalis subsp. lactis HN019] gi|240249104|gb|ACS46044.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium animalis subsp. lactis Bl-04] gi|289178450|gb|ADC85696.1| Glutamate-binding protein [Bifidobacterium animalis subsp. lactis BB-12] gi|295793701|gb|ADG33236.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium animalis subsp. lactis V9] Length = 279 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 97/255 (38%), Gaps = 14/255 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + + + ++++ ++ GI G +G ++GFDV Sbjct: 11 RKAIAMVCAASALFGMAACGSSSADGEK-----KIRIGIKYDQPGLGFK-KSGTFEGFDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D R +++ + ++I++L +K+R LQ+ +D++ T R+ ++F Sbjct: 65 DVARYVANQLGYTDAEIEFLEAPSKQREAMLQNGDVDMILATYSITDERKK--AVSFAGP 122 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + GQ ++ I+ L+G +C G+T+ + + F + + Sbjct: 123 YFVAGQDLMVRADDHSINGPEDLNGKRLCSVTGSTSAKVVKERFAK---EVQLMEQPGYA 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A + DA T D L L + ++ ++ I +GDT + Sbjct: 180 ECATALFSGIVDAVTTDDIILAGLASASRGK--LRVVGKPFTQEYYGVGIRKGDTAFAKQ 237 Query: 241 VSWTHYAMVTAEELG 255 ++ M+ + E Sbjct: 238 INAAIEDMIKSGEWE 252 >gi|16264462|ref|NP_437254.1| putative amino acid uptake ABC transporter periplasmic solute-binding protein precursor [Sinorhizobium meliloti 1021] gi|307306767|ref|ZP_07586508.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] gi|15140599|emb|CAC49114.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium meliloti 1021] gi|306902058|gb|EFN32656.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] Length = 280 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 98/259 (37%), Gaps = 7/259 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M F V+ + + + +S L ++ RG L G + + A + Sbjct: 1 MISRFTVAASFVAAVLAAMPAQAQQASSKLDEVLSRGHLILGTGSTNAPWHFKSAEDKLQ 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD R ++ A+F DP KI+++ ++ R + + ++DI + T R + +A Sbjct: 61 GFDVDMGRIIAKALFGDPEKIEFVNQSSDARIPNITTGKVDITCQFMTVTGER--AQQIA 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y +G G ++ + L A V + D A + +E Sbjct: 119 FTIPYYREGVGLMLKADGKYADYEALKAAGSSVTISVLQNVYAEDMVHAALPEATVDQYE 178 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 V+ I A + R DA D S+L + + A + +GD +W Sbjct: 179 SVDLIYQALESGRADAAATDQSSLAWYMTQ--NSGRYKDAGYGWNPQTYACGVRRGDQDW 236 Query: 238 YNIVSWTHYAMVTAEELGI 256 N V+ + +T E Sbjct: 237 LNFVNTALHEAMTGVEFDF 255 >gi|171740998|ref|ZP_02916805.1| hypothetical protein BIFDEN_00060 [Bifidobacterium dentium ATCC 27678] gi|171276612|gb|EDT44273.1| hypothetical protein BIFDEN_00060 [Bifidobacterium dentium ATCC 27678] Length = 311 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 11/218 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +IKK G LK + + F V +G++ G+DV F L+ + Y ++ Sbjct: 65 TLDEIKKSGELKVAVFSDKAPFGYVDKDGNYAGYDVYFAERLAKDLGVKA---AYTSVDP 121 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 R L S ++D+ N T R+ + F G + + I+ VSQL G Sbjct: 122 AARVDVLTSNKVDVTLANFTVTDERKE--KVDFAKPYMKVALGVVSPEGAEITDVSQLKG 179 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ V GTT E F+ + +++ + A R DA++ D + + A Sbjct: 180 KTLIVAKGTTAETY----FEKNEPDIKLQKYDQYADAYNALLDGRGDAFSTDNTEVLAWA 235 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 V + + + +APA+ +G+ E + ++ Sbjct: 236 --KSNKGFKVGITKLGDEDTIAPAVQKGNKELLDWINE 271 >gi|148642867|ref|YP_001273380.1| polar amino acid ABC transporter, substrate-binding component [Methanobrevibacter smithii ATCC 35061] gi|148551884|gb|ABQ87012.1| polar amino acid ABC transporter, substrate-binding component [Methanobrevibacter smithii ATCC 35061] Length = 273 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 86/246 (34%), Gaps = 14/246 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 + L G + + NG++ GFD+D + + + + P++ + Sbjct: 35 VNDDKTLVVGFDAEFPPYGYKDDNGEYVGFDLDVAQEVCDR---NNWTLVKQPIDWDAKD 91 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L S ID + + + + + Q ++ GI S+S L G ++ Sbjct: 92 SELNSGSIDCIWNGFTMNGRED---QYTWSDPYFDNKQVIVVKNGSGIDSLSDLKGKNVE 148 Query: 150 VQAGTTTELTLA-DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 Q ++ L D + + + + CDA DI + + Sbjct: 149 TQKDSSALAALQGDQKALADTFGNLVEVADYNTAFMDLESGACDAIAVDIGVAHYQINSK 208 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 D + VIL D IS A G+TE + V T M I++++ Sbjct: 209 DNDGDFVILNDNISSEQYAIGFKNGNTELRDQVQSTLDEMF-------KDGTIDKIADKY 261 Query: 269 TNPDVQ 274 ++ D++ Sbjct: 262 SDYDIK 267 >gi|222445100|ref|ZP_03607615.1| hypothetical protein METSMIALI_00719 [Methanobrevibacter smithii DSM 2375] gi|261350332|ref|ZP_05975749.1| bacterial extracellular solute-binding protein, family 3 [Methanobrevibacter smithii DSM 2374] gi|222434665|gb|EEE41830.1| hypothetical protein METSMIALI_00719 [Methanobrevibacter smithii DSM 2375] gi|288861116|gb|EFC93414.1| bacterial extracellular solute-binding protein, family 3 [Methanobrevibacter smithii DSM 2374] Length = 273 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 86/246 (34%), Gaps = 14/246 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 + L G + + NG++ GFD+D + + + + P++ + Sbjct: 35 VNDDKTLVVGFDAEFPPYGYKDDNGEYVGFDLDVAQEVCDR---NNWTLVKQPIDWDAKD 91 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L S ID + + + + + Q ++ GI S+S L G ++ Sbjct: 92 SELNSGSIDCIWNGFTMNGRED---QYTWSDPYFDNKQVIVVKNGSGIDSLSDLKGKNVE 148 Query: 150 VQAGTTTELTLA-DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 Q ++ L D + + + + CDA DI + + Sbjct: 149 TQKDSSALAALQGDQKALADTFGNLVEVADYNTAFMDLESGACDAIAVDIGVAHYQINSK 208 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 D + VIL D IS A G+TE + V T M I++++ Sbjct: 209 DNGGDFVILNDNISSEQYAIGFKNGNTELRDQVQSTLDEMF-------KDGTIDKIADKY 261 Query: 269 TNPDVQ 274 ++ D++ Sbjct: 262 SDYDIK 267 >gi|222081147|ref|YP_002540510.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725826|gb|ACM28915.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 267 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 92/253 (36%), Gaps = 10/253 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + ++ + + +A+ L DI RG ++ G+ TG V G+ G+DVD Sbjct: 8 RGIMAAVGIVATGLLATTQAHATTLNDIVSRGKVRIGVLTGAPPMGMVDEKGNPAGYDVD 67 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 ++ ++ +PL R ALQ+ ++D L T R + + F Sbjct: 68 VANLIA---GYLSLPVELVPLTPPSRIPALQTGKVDFLVATLAPTGERAKT--VMFTQPY 122 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 I + + +S L G + V G++ E L KA +V+E Sbjct: 123 SAFNMDIISGPDQKFTQLSDLQGKRVAVNRGSSQETALR---KAAVPGLEIVVYEDDSTS 179 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A A + DA + + + RP + + + + A D E ++ Sbjct: 180 AQALIAGQTDA--AAVPSTVGEAIIKQRPDAGLQVGFTFFQQGNSMATKIDDFELRQWLN 237 Query: 243 WTHYAMVTAEELG 255 Y M + +L Sbjct: 238 TAIYLMKVSGDLD 250 >gi|210620907|ref|ZP_03292324.1| hypothetical protein CLOHIR_00267 [Clostridium hiranonis DSM 13275] gi|210155119|gb|EEA86125.1| hypothetical protein CLOHIR_00267 [Clostridium hiranonis DSM 13275] Length = 259 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 36/248 (14%), Positives = 87/248 (35%), Gaps = 8/248 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ + T S + G + V + +G+ GFD Sbjct: 1 MKKLLRKVMVVFAAMVMVLGMTACSSKDSGSADNKVIVGFDNTFVPMGFLDEDGNTVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + ++++ P++ + L S +D+L + R+ +++ Sbjct: 61 VDLAKETFERLG---MEVEFQPIDWSMKETELNSGNVDVLWNGYSLSQERKKI--VSYSD 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY--FKAHNMKYHPIVFER 178 + Q + I+ + L+G + Q +T + + F + P++++ Sbjct: 116 PYLQNKQIIVTMADSNINKKADLAGKEVGTQQESTAQAAVETDTEFVSSLKGGAPVLYDT 175 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++ R A GD + ++ ++ +L + A + +TE Sbjct: 176 YDKALRDLEIGRTSAVAGDEVLIR-YYMSQKGEDKYKVLEENFGLEDYVVAFAKDNTELR 234 Query: 239 NIVSWTHY 246 + V+ T Sbjct: 235 DKVNDTLK 242 >gi|161524852|ref|YP_001579864.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189350398|ref|YP_001946026.1| polar amino acid transporter substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|160342281|gb|ABX15367.1| extracellular solute-binding protein family 3 [Burkholderia multivorans ATCC 17616] gi|189334420|dbj|BAG43490.1| polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] Length = 264 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 84/251 (33%), Gaps = 17/251 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +L ++ + + A +L +K+RG L+ G+ F A G+ Sbjct: 1 MKFALLKKLLVAGLIGTSFAAATAHAADLLDQVKQRGTLRIGLEGTFPPFNSKNAQGELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + P ++ LQ+ + D++ T R+ + L Sbjct: 61 GFDVDIAKAVAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDKRKET--LD 115 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F P + I K S+ L G + V GT Sbjct: 116 FSPAYTYSSAQLIQRKDDTRQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKT 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E A R DA D L L + P ++ S +P +G+ Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNP 228 Query: 236 EWYNIVSWTHY 246 ++ + Sbjct: 229 KFQKAIDDAMT 239 >gi|289522553|ref|ZP_06439407.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504389|gb|EFD25553.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 257 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 93/256 (36%), Gaps = 20/256 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + + LF + +A G + G F ++ G GFD Sbjct: 14 MKKCLFYLSVIALALFVSVAPVSAKTY---------VVGTSAGFPPFEYIQE-GKIVGFD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ + + +++ ++ L + IDI++ T R + F Sbjct: 64 VDLMKAIAESQGFE---VEFQDISFDSLIPGLNAGTIDIVAAGMTITEERAKV--VDFTE 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179 Y Q ++ + G + +I VQ GTT +L + + + + F+ Sbjct: 119 PYYSANQALLVKEGSGNTLTVLFGNHNIAVQTGTTGDLWVEENLEKTGILTGKVTRFDTF 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 D D A + ++P V++ +II+ A+ +G+ E Sbjct: 179 VLAIQDLINGNVDGVVLDTP--VAKRYAAEKPV--VMVAEIITGEQYGLAVAKGNKELLE 234 Query: 240 IVSWTHYAMVTAEELG 255 ++ + T+ ++ Sbjct: 235 KLNKGLEEVKTSGKMD 250 >gi|329911826|ref|ZP_08275610.1| putative amino acid ABC transporter, periplasmic-binding protein [Oxalobacteraceae bacterium IMCC9480] gi|327545794|gb|EGF30921.1| putative amino acid ABC transporter, periplasmic-binding protein [Oxalobacteraceae bacterium IMCC9480] Length = 268 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 80/251 (31%), Gaps = 15/251 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDV 61 K + L+ + A +L ++ RG LK G+ F GF++ Sbjct: 7 KKLAGLMTALLFSGLVVPAHAADLLATVQARGTLKVGVEGTYPPFNFRDTTTRALSGFEI 66 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D R L++ + P + + L + + D++ T RE F Sbjct: 67 DVARLLAAKMGLKPE---FTTIEWSGILAGLSAGKYDVILNQVGITPQREA--SFDFSDP 121 Query: 122 TYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ K + +S+ L G + V GT E + Sbjct: 122 YTRSSAQLIVRKNEQRQFTSLDDLKGKKLGVGQGTNYEERAKAVA-----GVDVKSYPGA 176 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A R DA + S + + L P I + + ++G+ ++ Sbjct: 177 PEYLQDLAAGRVDA-ALNDSLMVSYLLKAS-PLPIKAGAPIGEVAQMGIPFVKGNPQFKA 234 Query: 240 IVSWTHYAMVT 250 ++ A++ Sbjct: 235 ALNTALAAIIA 245 >gi|70733754|ref|YP_257394.1| cystine transporter subunit [Pseudomonas fluorescens Pf-5] gi|68348053|gb|AAY95659.1| cystine ABC transporter, periplasmic cystine binding protein [Pseudomonas fluorescens Pf-5] Length = 265 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 89/261 (34%), Gaps = 20/261 (7%) Query: 2 YKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 ++ + L L + + L IK G + G+ F+ V NG GF+ Sbjct: 7 RRNLLIGTLGLALGAGLMGQAVAGEQLQKIKDAGVINVGLEGTYPPFSYVDENGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL++ + ++ P AL+SK++D + + R+ F Sbjct: 67 VEFSEALANKLGVK---VKLQPTKWDGILAALESKRLDAVVNQVTISEERKK--KYDFSI 121 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G + KK + + L G + V GT E L D + ++ Sbjct: 122 PYTVSGIQALTQKKDEGKFKTAADLGGHKVGVGLGTNYEQWLKD----NVPTAIIKTYDD 177 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R +A D L A +L V+ + S+ A+ +G+ E Sbjct: 178 DPTKYQDLRVGRIEAILVDR--LAAFELIKKTKDTLVVSGEPFSRQEAGVALRKGEPELL 235 Query: 239 NIVSWTHYAMVTAEELGITQK 259 V+ EEL Sbjct: 236 AAVNKAI------EELRADGT 250 >gi|78355233|ref|YP_386682.1| extracellular solute-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217638|gb|ABB36987.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 251 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 86/260 (33%), Gaps = 22/260 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F + L + + + A L GI+ FA V +G GFD Sbjct: 1 MLRKFTIMAAVLALSLAFAGTAFAG--------KTLINGIDANYPPFAYVDKDGKPAGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +++ + +++ P+ +L SK+ID++ T R ++F Sbjct: 53 VDAMEWIAAKMG---FTVKHKPMEWSTIVQSLVSKKIDMVCSGMSITEERAR--QVSFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN--MKYHPIVFER 178 + Q FI K G++ +G T+E D K + Y ++ Sbjct: 108 PYWTVAQVFIAKKGSGLTVEQVFTGGKKLGVQSGTSEADWLDKEKPNKPEWNYTVRFYDS 167 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R DA D A +P E ++ A+ + D E Sbjct: 168 APLAIEDVINGRIDAAAMD--IAPAQDAQRVKPIE--VVGSFTDPEYFGIAVRKEDKELL 223 Query: 239 NIVSW---THYAMVTAEELG 255 ++ A EEL Sbjct: 224 ETINKGLALLKADPYWEELK 243 >gi|289627074|ref|ZP_06460028.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646271|ref|ZP_06477614.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298486960|ref|ZP_07005013.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158522|gb|EFH99589.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330866809|gb|EGH01518.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 277 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 96/257 (37%), Gaps = 15/257 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + L L L + +A L D+ + L CG+ + F+ + G Sbjct: 1 MRMKSLLVALALSPLAVSV--AHADQLSDVMSKKSLSCGVYADVPPFSAPDPKTRELVGM 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C+AL+ + + ++ PL+ + R ++ ++D++ N +T R + + F Sbjct: 59 DVDLCKALAKHMGVE---LELKPLSVEARIPEVKMGRVDVIFANLAYTKSR--ADQIQFS 113 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + ++ S G I G+T+E ++ P+ F+ Sbjct: 114 DPYYIAKETLVVRAANADQPKSFFKGKRISSTKGSTSEQSIR------LADATPVTFQDT 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWY 238 A + ++ + L E I + ++ P+ + QG+ + Sbjct: 168 GSAYMALQQNKVVGLVTNTMTAIKLVGQAKASGVELAIAKEPMALEPIGAGMRQGEPAFL 227 Query: 239 NIVSWTHYAMVTAEELG 255 V+ + AM A E+ Sbjct: 228 AKVNESLRAMEAAGEID 244 >gi|297565168|ref|YP_003684140.1| family 3 extracellular solute-binding protein [Meiothermus silvanus DSM 9946] gi|296849617|gb|ADH62632.1| extracellular solute-binding protein family 3 [Meiothermus silvanus DSM 9946] Length = 247 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 85/265 (32%), Gaps = 22/265 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++L L+ L S + S L K G L G + F + + GFD Sbjct: 1 MRKWF--AVLALVGLLGASSTLAQSCLASAKANG-LTVGTSPDYPPFESLDKDNKIIGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + K+ + + AL SK+ID+++ T R+ + F Sbjct: 58 VDLINAIAGELG---LKVSVIGQSFDGLIPALLSKKIDVIAAGLTITEERKK--SVDFTR 112 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I K+ GIS + L+G + VQ G+ E + A + Sbjct: 113 PYISGPNVIITRKETSGISKLEDLAGKKVAVQIGSAQEKIASGVKGA-----QVKSYNLY 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A + DA A L + + A+ + + Sbjct: 168 TDAALAVNTRQADALIVHRFVGRAFLKQYPDLKIVAELNQVDT----GLALRKDCGDL-- 221 Query: 240 IVSWTHYAMVTAEELGITQKNINQV 264 A + E + Sbjct: 222 --RQAIDAAIEKLEQNGKMDELAAK 244 >gi|312883550|ref|ZP_07743275.1| amino acid ABC transporter amino acid-binding protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309368773|gb|EFP96300.1| amino acid ABC transporter amino acid-binding protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 256 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 88/260 (33%), Gaps = 23/260 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + + + K ++ GI F+ +A+G KGFD Sbjct: 1 MKKWLLAAVLTATAVSGVTQA---------KNWKTVRFGIEGAYPPFSWTEADGSLKGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + K + + + +L +++ D + T R+ + F Sbjct: 52 VDMANALCNEM---QVKCKIVAQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 FI K GI + L G I VQ TT + L D + K + + + Sbjct: 107 KYALIPNKFIAKKGAGI-DFNNLDGQKIAVQRATTHDKYLTDNY---GDKVEIVRYGSFD 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDT 235 E R A GD SAL L + + ++ A+ + D Sbjct: 163 EAYLDLANGRVVAVLGDASALEEGVLNKAGGDAYEFVGPSLTDPKWFGEGFGIAVRKQDK 222 Query: 236 EWYNIVSWTHYAMVTAEELG 255 ++ ++ E Sbjct: 223 ALTEKLNAAIKSLRAKGEYQ 242 >gi|71737113|ref|YP_274662.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557666|gb|AAZ36877.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 277 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 96/257 (37%), Gaps = 15/257 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + L L L + +A L D+ + L CG+ + F+ + G Sbjct: 1 MRMKSLLVALALSPLAVSF--AHADQLSDVMSKKSLSCGVYADVPPFSAPDPKTRELVGM 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C+AL+ + + ++ PL+ + R ++ ++D++ N +T R + + F Sbjct: 59 DVDLCKALAKHMGVE---LELKPLSVEARIPEVKMGRVDVIFANLAYTKSR--ADQIQFS 113 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + ++ S G I G+T+E ++ P+ F+ Sbjct: 114 DPYYIAKETLVVRAANADQPKSFFKGKRISSTKGSTSEQSIR------LADATPVTFQDT 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWY 238 A + ++ + L E I + ++ P+ + QG+ + Sbjct: 168 GSAYMALQQNKVVGLVTNTMTAIKLVGQAKTSGVELAIAKEPMALEPIGAGMRQGEPAFL 227 Query: 239 NIVSWTHYAMVTAEELG 255 V+ + AM A E+ Sbjct: 228 AKVNESLRAMEAAGEID 244 >gi|284009203|emb|CBA76274.1| amino acid ABC transporter, substrate-binding protein [Arsenophonus nasoniae] Length = 274 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 90/248 (36%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M + ++L + + T A L IKK G ++ + F + A G+ Sbjct: 1 MKSNLITTLLSVALALVTGL-AKADKLESIKKSGVIRIAVFDSNPPFGFIDAKTKKLVGY 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D A+++ + P N R L ++D++ N T R + F Sbjct: 60 DIDIAEAIANDFGVK---LVLRPTNPANRIPLLTGGKVDLIGANFTITNERAK--QVDFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + GQ FI + + + I GT E+TL + + I ++ Sbjct: 115 IPDFATGQKFIAR-IGVLKTPDDIIPLRIGADKGTVQEITLRERYP----NTKVISYDDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEW 237 AA R A T D + L L ++ I P +++ A A +G+T Sbjct: 170 PLAFAALRNGNVQAITQDDAKLVGLLGNLPAKIKADYEISPFSLTREYQALAAAKGETNL 229 Query: 238 YNIVSWTH 245 N V+ T Sbjct: 230 INAVNNTL 237 >gi|134295624|ref|YP_001119359.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134138781|gb|ABO54524.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia vietnamiensis G4] Length = 264 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 84/251 (33%), Gaps = 17/251 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +L ++ + + A +L ++K+RG L+ G+ F G+ Sbjct: 1 MKISLLKKLLVAGLVGTSFAAATAHAADLLDEVKQRGTLRVGLEGTFPPFNSKSPQGELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + ++ LQ+ + D+++ T R+ + L Sbjct: 61 GFDVDIAKAVAAKLGVKAE---FVTTEWSGIIAGLQAGKFDVIANQVGITDKRKET--LD 115 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F P + I K S+ L G + V GT Sbjct: 116 FSPAYTYSSAQLIQRKDDTRQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKT 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E A R DA D L L + P ++ S +P +G+ Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNP 228 Query: 236 EWYNIVSWTHY 246 ++ + Sbjct: 229 KFQKAIDDAMT 239 >gi|260772505|ref|ZP_05881421.1| amino acid ABC transporter amino acid-binding protein [Vibrio metschnikovii CIP 69.14] gi|260611644|gb|EEX36847.1| amino acid ABC transporter amino acid-binding protein [Vibrio metschnikovii CIP 69.14] Length = 258 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 85/251 (33%), Gaps = 23/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L + + K+ ++ GI F+ +A+G +GFD Sbjct: 1 MKKWLLIVAIAASALSGIAQA---------KEWKTVRFGIEGAYPPFSWTEADGSLRGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + +P + +L +++ D + T R+ + F Sbjct: 52 VDMANALCAEM---QVECVIIPQDWDGIIPSLLARRYDAIIAAMSITEERKK--RVDFTK 106 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 FI K + + L G I VQ TT + L D + + + + Sbjct: 107 KYAQIPNRFIAKKDANLDFTPEGLKGVRIGVQRATTHDKYLTDNY---GRSVNIVRYGSF 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 ++ R A GD SAL L + + ++ + A+ + D Sbjct: 164 DDAYLDLANGRIAAVLGDASALEEGMLNRPGGDGYEFVGPSLTDPKWFGEGMGIAVRKQD 223 Query: 235 TEWYNIVSWTH 245 ++ Sbjct: 224 KALTEQLNRAI 234 >gi|85707349|ref|ZP_01038432.1| putative ABC transporter periplasmic amino acid-binding protein [Roseovarius sp. 217] gi|85668157|gb|EAQ23035.1| putative ABC transporter periplasmic amino acid-binding protein [Roseovarius sp. 217] Length = 268 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 89/255 (34%), Gaps = 8/255 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K I L+ + + + A L DI G L+C + + GFD Sbjct: 1 MKK--MTLIAALLGMTSIAGTAQADKLDDIISSGTLRCAVVLDFPPMGMRDESNVPIGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C L++A+ + ++ ER AL S ++D+ +T TL R ++G F Sbjct: 59 VDYCNDLAAALGVEAEIVE---TPFPERIPALMSGRVDVGVASTSDTLERAKTVG--FSV 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + GISS + G ++ AGT + L K ++ Sbjct: 114 PYFAFEMAVTANNATGISSYEGMKGFTVGAVAGTYEAIALEAQVKEWGEG-EFRPYQTQA 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ A + DA + A + + V+ +A + + + N Sbjct: 173 DVFLALSQGQLDATVSTSTVAQANVQSGNFGDISVVGFAPFDTDYVALFAKRDEYGFLNY 232 Query: 241 VSWTHYAMVTAEELG 255 + V Sbjct: 233 LDLFVNQQVRTGRYD 247 >gi|16262494|ref|NP_435287.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium meliloti 1021] gi|14523099|gb|AAK64699.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium meliloti 1021] Length = 271 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 80/243 (32%), Gaps = 11/243 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + +S+L I+ A + IK G +K G+ F + AN G+D D Sbjct: 11 RRIAISVLGAAIVAGLVAPAAAQTVETIKSAGTVKVGMLVDFPPFGIMDANNQPDGYDAD 70 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + L+ + + + +P+ R LQS Q+D+L + T R + F Sbjct: 71 VAKLLAKELGVE---VTIVPVTGPNRIPYLQSNQVDLLVASLGITEERAK--NVDFSQPY 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G ++ L+G +I V +T + + F+ Sbjct: 126 AGISIGVFGAADLAVTKPEDLAGKTIGVARASTQDTATTKIAPQ---DANIQRFDDDASA 182 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + + + ++ + +S+ A+ +G +E V+ Sbjct: 183 VQALLSGQVELIGVSNVVAAQIEAAAPGRFNQKL---QLSQQVQGIAVRKGSSEMLKFVN 239 Query: 243 WTH 245 Sbjct: 240 GFL 242 >gi|298485133|ref|ZP_07003229.1| Cystine-binding periplasmic protein precursor [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160385|gb|EFI01410.1| Cystine-binding periplasmic protein precursor [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330886121|gb|EGH20022.1| cystine transporter subunit [Pseudomonas syringae pv. mori str. 301020] Length = 265 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 78/245 (31%), Gaps = 10/245 (4%) Query: 2 YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S L L++ + L IK G L G+ F+ V NG GF+ Sbjct: 7 RRTFLFSALSLMLGTGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + + P AL SK++D++ + R+ + Sbjct: 67 VEFSEALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISEERKKKYDFSEPY 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + I + L+G + V GT E L K + ++ Sbjct: 124 TVSGIQALVLKKNADTIKTAKDLTGKKVGVGLGTNYEQWL----KENVPGAIVKTYDDDP 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 R DA D A + V D S+ A+ +G+ E Sbjct: 180 SKIQDLSVGRIDAILVDRLAALEMATKTKNK--LVPAGDAFSRQESGIALRKGEPELQAA 237 Query: 241 VSWTH 245 + Sbjct: 238 IDKAI 242 >gi|241663660|ref|YP_002982020.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|240865687|gb|ACS63348.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 281 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 12/232 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + DIKK+G L CG+ F+ +K + + G+DVD C A++ ++ P Sbjct: 29 DQVSDIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDMCDAIAKSLGVKP---VLKQ 85 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L R LQ ++D+L+ + RE + F T+ GQ ++ K GI+S++Q Sbjct: 86 LAVAARLPELQQGRVDLLAASLTHNKEREA--QIDFSVSTFITGQKAMVKKSSGITSLAQ 143 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G + G+T E +A K + F+ + A + + AY D + L Sbjct: 144 LDGKKLLTVKGSTMEANIAKTIK----NADVVSFDNSPQALLALQQGKGVAYVNDETTLI 199 Query: 203 ALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 ++ +LP +S LA I +G+ + V M + E Sbjct: 200 GNMAKMGPAAKDYALLPQNLSTEHLALGIRKGEPAFKKQVDDVLLGMEKSGE 251 >gi|187929541|ref|YP_001900028.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|309781684|ref|ZP_07676417.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ralstonia sp. 5_7_47FAA] gi|187726431|gb|ACD27596.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] gi|308919325|gb|EFP64989.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ralstonia sp. 5_7_47FAA] Length = 281 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 12/232 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + DIKK+G L CG+ F+ +K + + G+DVD C A++ ++ P Sbjct: 29 DQVSDIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDMCDAIAKSLGVKP---VLKQ 85 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L R LQ ++D+L+ + RE + F T+ GQ ++ K GI+S++Q Sbjct: 86 LAVAARLPELQQGRVDLLAASLTHNKEREA--QIDFSVSTFITGQKAMVKKSSGITSLAQ 143 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G + G+T E +A K + F+ + A + + AY D + L Sbjct: 144 LDGKKLLTVKGSTMEANIAKTIK----NADVVSFDNSPQALLALQQGKGVAYVNDETTLI 199 Query: 203 ALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 ++ +LP +S LA I +G+ + V M + E Sbjct: 200 GNMAKMGPAAKDYALLPQNLSTEHLALGIRKGEPAFKKQVDDVLLGMEKSGE 251 >gi|307728863|ref|YP_003906087.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] gi|307583398|gb|ADN56796.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] Length = 267 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 89/244 (36%), Gaps = 11/244 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + S+L IL T+ + +A L +I K G LK + F V + +G+D+ Sbjct: 10 RRTLLASLLVSSILAITAHAAHADTLDNIVKAGVLKVAVPEDYPPFGSVGPDMKPQGYDI 69 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D L+ ++ K++ +P+N+ R LQ+ ++D++ + T RE + F Sbjct: 70 DTAALLAKSM---NVKLELVPVNSANRIPYLQTNKVDLVISSLGKTPDREKV--IDFSTA 124 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 QG +S + L+G ++ G E+ L+ FE Sbjct: 125 YAPYYQGVFGPADIKVSGPADLTGKTVGATRGALEEIGLSQMAP----NATIKRFEDNNA 180 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AA+ + + A+ P +I SP + + + V Sbjct: 181 TIAAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEPKFVIKNSPCFVGMNKNEPRLQQKV 238 Query: 242 SWTH 245 + Sbjct: 239 NAAI 242 >gi|207723710|ref|YP_002254108.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum MolK2] gi|206588914|emb|CAQ35876.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum MolK2] Length = 284 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 12/233 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 A L DIKK+G L CG+ F+ +K + + G+DVD C A++ ++ P Sbjct: 31 ADQLSDIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDMCNAVAKSLGVKP---VLK 87 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 L R LQ ++D+L+ + RE + F T+ GQ ++ K GI++++ Sbjct: 88 QLAVAARIPELQQGRVDLLAASLTHNKERET--QIDFSVSTFITGQKAMVRKDSGITTLA 145 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G + G+T E + K + F+ + A + + AY D + L Sbjct: 146 QLDGKKVLTVKGSTMEANIGHAIK----NADIVSFDNSPQALLALQQGKGAAYVNDETTL 201 Query: 202 YALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 ++ I+P +S A I + + + V+ M + + Sbjct: 202 IGNMAKLGPASKDYAIVPQNLSTEHFALGIRKNEPAFREQVNKVLLGMEASGD 254 >gi|83746551|ref|ZP_00943602.1| Hypothetical Protein RRSL_03550 [Ralstonia solanacearum UW551] gi|207743861|ref|YP_002260253.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum IPO1609] gi|83726882|gb|EAP74009.1| Hypothetical Protein RRSL_03550 [Ralstonia solanacearum UW551] gi|206595261|emb|CAQ62188.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum IPO1609] Length = 284 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 12/233 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKA--NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 A L DIKK+G L CG+ F+ +K + + G+DVD C A++ ++ P Sbjct: 31 ADQLSDIKKKGELVCGVLGTDEPFSFLKDPMSREIVGYDVDMCNAVAKSLGVKP---VLK 87 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 L R LQ ++D+L+ + RE + F T+ GQ ++ K GI++++ Sbjct: 88 QLAVAARIPELQQGRVDLLAASLTHNKERET--QIDFSVSTFITGQKAMVRKDSGITTLA 145 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G + G+T E + K + F+ + A + + AY D + L Sbjct: 146 QLDGKKVLTVKGSTMEANIGHAIK----NADIVSFDNSPQALLALQQGKGAAYVNDETTL 201 Query: 202 YALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 ++ I+P +S A I + + + V+ M + + Sbjct: 202 IGNMAKLGPASKDYAIVPQNLSTEHFALGIRKNEPAFREQVNKVLLGMEASGD 254 >gi|298294202|ref|YP_003696141.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296930713|gb|ADH91522.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 260 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 89/255 (34%), Gaps = 11/255 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ + A L DI R ++ + T F V A+ +G D Sbjct: 1 MTTRILFAAAIGLMATLGAVPAVADALDDIIARKTIRVAVPTDYPPFGSVGADMQPRGMD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + ++ +P+ A R LQS + D+ + T R + F Sbjct: 61 IDVANLIGEKLGVK---VELVPVTAPNRVAFLQSGKTDLTISSLGKTEERAKV--IDFSI 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 K+ + + LSG I V G+ + LAD FE Sbjct: 116 AYSPFFDAIFGKKEPPVKEYADLSGKKISVTRGSMQDKELADLAPKA----VVQRFEDNN 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 AA+ + + + + A+K P + L +++ SP +++G+T + Sbjct: 172 STIAAFMSGQVEMFASGTPVAAAIKRR--NPDLDLELKIVLANSPCYVGVVKGETRLLDK 229 Query: 241 VSWTHYAMVTAEELG 255 V+ E+ Sbjct: 230 VNEIIREAKAKGEID 244 >gi|91783382|ref|YP_558588.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91687336|gb|ABE30536.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 274 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 95/255 (37%), Gaps = 10/255 (3%) Query: 1 MYKDFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + +L + L F+ S +A L K RG L GI V F + G G Sbjct: 1 MSKRSWWVVLMMFALGFSWLSAGAHADELQMAKARGKLIVGIRNDYVPFGYLDNKGHEVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + ++ +F + I+++P+ A R L + +ID++ R + F Sbjct: 61 FEVDLAKFIAKDMFGSDTAIEFVPVVASNRIELLNAGRIDVIFATLGKNPDRAKV--IDF 118 Query: 119 RPITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G + K I+ L G IC G TL + A ++F Sbjct: 119 TDPYYMMAGMVLLAPKNTTITKWEDLKGRKICGSQGNMYNRTLQEKLGA-----DTVLFT 173 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 ++ A+ +RC+A D L + I D P+ + + + + Sbjct: 174 GTAQMYKAFEDNRCEAIAYDGPNLTLKANEPGWKDKDKIALDAFEFVPIVGGVRKNEPAF 233 Query: 238 YNIVSWTHYAMVTAE 252 N ++ + A Sbjct: 234 LNALNQSIKKAEAAG 248 >gi|227530663|ref|ZP_03960712.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus vaginalis ATCC 49540] gi|227349444|gb|EEJ39735.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus vaginalis ATCC 49540] Length = 285 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 64/251 (25%), Positives = 104/251 (41%), Gaps = 22/251 (8%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IKKRG L+ + L + V +G G+DV+ R ++ + P +++ +NA R Sbjct: 46 IKKRGTLRVAVFGDLPPYGWVNKDGKRVGYDVELARRMAKDLGVKP---KFIQVNANNRV 102 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L S + DI+ N T R+ + F G + KKK I+ VSQL G + Sbjct: 103 DTLNSNKADIVLANFTVTPERKKV--VDFAKPYMKVSVGVVSPKKKAITKVSQLKGKKVI 160 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V GTT E +YF + + F+ + A + +R A D S LYA + Sbjct: 161 VTKGTTAE----NYFTSKQPGVQLLKFDSKTQQFNALKNNRAAALADDNSYLYAW--VKN 214 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 P V + I K ++PA+ +G+ N + IT+ N Sbjct: 215 NPKYTVGIKSIGPKQYISPAVKKGNKSLLNWSNK-----------EITKLNKEDFFTKDY 263 Query: 270 NPDVQRFLGID 280 N ++ + G + Sbjct: 264 NSQLKPYFGSE 274 >gi|224282754|ref|ZP_03646076.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium bifidum NCIMB 41171] Length = 284 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 94/265 (35%), Gaps = 17/265 (6%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 + + + + G ++ GI G +G + GFDVD + ++ Sbjct: 27 VACAMSLAACGAD--------ESGKIRIGIKFDQPGLGFK-KSGTYVGFDVDVAKYVAKK 77 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + +I + +K+R LQ+ +D++ T R+ ++F + GQ + Sbjct: 78 LGYSEDEIVWKEAPSKQREAMLQNGDVDMILATYSITDERK--NAVSFAGPYFVAGQDLL 135 Query: 131 MHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + K I+ L+G +C G+T+ T+ F + + + E A + Sbjct: 136 VRKDDHSINGPEDLNGKRLCSVTGSTSAATVKKKFAS---EVQLMEQPGYAECATALFSG 192 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 DA T D L L + ++ ++ I +GDT ++ M+ Sbjct: 193 IVDAVTTDDIILAGLASASRGK--LRVVGKPFTQEYYGVGIKKGDTALAKKINAAIAEMI 250 Query: 250 TAEELGITQKNINQVSKDTTNPDVQ 274 + + + T N + Sbjct: 251 KDGSWERAIADNTEGTSYTPNAEYN 275 >gi|123442746|ref|YP_001006723.1| cystine transporter subunit [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089707|emb|CAL12559.1| putative cystine-binding periplasmic protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 266 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 81/248 (32%), Gaps = 15/248 (6%) Query: 2 YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + ++ + + + +L +K+RG L G+ F+ +G GF Sbjct: 7 RRRVVLGMMAVALATGLNVKSYAAGDLLDQVKERGTLIVGLEGTYPPFSFQGEDGKLTGF 66 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VDF AL+ + + P +L+SK+ID+ + R+ F Sbjct: 67 EVDFANALAEHMGVKA---KITPTKWDGMLASLESKRIDVAINQVTISDERKK--KYDFS 121 Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G + K S L G + V G+ E L + K ++ Sbjct: 122 TPYTVSGIQVLTKKGNEGKFSKPEDLVGKKVGVGLGSNYEQWLRENLK----DVDIRTYD 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R R DA D L AL L + ++ A+ + + E Sbjct: 178 DDPTKYQDLRVGRTDAILVDR--LAALDLVKKTNDTLAVAGPAFARQESGVALRKNNPEL 235 Query: 238 YNIVSWTH 245 ++ Sbjct: 236 LAAINQAI 243 >gi|330899980|gb|EGH31399.1| cystine transporter subunit [Pseudomonas syringae pv. japonica str. M301072PT] Length = 265 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 86/245 (35%), Gaps = 10/245 (4%) Query: 2 YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S + L++ + L IK G L G+ F+ V +G GF+ Sbjct: 7 RRTFLFSAMGLMLGAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + + P AL SK++D++ + R+ + Sbjct: 67 VEFSEALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSEPY 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + I S L+G + V GT E ++ KA+ ++ Sbjct: 124 TVSGIQALVLKKNEDAIKSAKDLTGKKVGVGLGTNYE----EWLKANVPGAIVKTYDDDP 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 R DA D L AL++ ++ V D S+ A+ +G+ E Sbjct: 180 SKIQDLSVGRIDAILVDR--LAALEMAAKTKNKLVPAGDAFSRQESGIALRKGEPELLAA 237 Query: 241 VSWTH 245 + Sbjct: 238 IDKAI 242 >gi|186471430|ref|YP_001862748.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184197739|gb|ACC75702.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 277 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 51/262 (19%), Positives = 94/262 (35%), Gaps = 22/262 (8%) Query: 6 FVSILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 F + ++ L + + S L + +RG L+ G F +G Sbjct: 10 FACLSAVVGLLALAGCTKVATPGQDAATGSTLQAVLQRGTLRVGDCLTFAPFGFYDKSGQ 69 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+DVD + L+ + ++ + + R LQ+ ++D++ N L R + Sbjct: 70 PDGYDVDLAKELAKQMGVK---LEMVNTTSANRIPNLQTAKVDVVFCNFTRNLERAKEIA 126 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + ++ K GI SV +SG +I G+T D +A + Sbjct: 127 --FTTPYVVASEALLVKKSSGIQSVKDMSGHTIATVKGSTN----GDEVRALGIPVKIQE 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ E A + + DA D + L P V ++ A + GD Sbjct: 181 FDSSEAAILAVKQGQADAMIEDNNFLAYQAKL--DPELTVTNEALVPLEYNAFGVKAGDQ 238 Query: 236 EWYNIVSWTHYAMVTAEELGIT 257 W N ++ + + A +L Sbjct: 239 VWLNYLNLFLF-NINASKLNAQ 259 >gi|254517084|ref|ZP_05129142.1| hypothetical protein NOR53_163 [gamma proteobacterium NOR5-3] gi|219674589|gb|EED30957.1| hypothetical protein NOR53_163 [gamma proteobacterium NOR5-3] Length = 267 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 83/252 (32%), Gaps = 15/252 (5%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M+K S + L ++ L + + L G++ G+ G Sbjct: 1 MFKPVQILASSFLAMSLLLAPWAQAGDTLDRVVENKVLVVGMSGDQPPMNMTNRQGELMG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD +AL++A+ D ++ P+ + AL++ +ID++ T R +F Sbjct: 61 FDVDLAKALANAMHAD---LKLSPMPFGDLSKALETGKIDMIVSGMAITAERSR--SASF 115 Query: 119 RPITYFDGQGFIMHK---KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 G+ + + ++ S + + +T+ + + + Sbjct: 116 VGPYMMSGKSILATRAAIEEIASGGIAATDVKLAALKNSTSASFVLEAAP----NATLVE 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 EE + D L N V L ++ P A+ D Sbjct: 172 VANYEEAIEMVTSGAVAGMVADAPVCQLQVLRNPDAG-LVTLDKPLTVEPFGVAVASDDP 230 Query: 236 EWYNIVSWTHYA 247 ++ N+V A Sbjct: 231 QFLNLVRNYLRA 242 >gi|330859510|emb|CBX69853.1| cystine-binding periplasmic protein [Yersinia enterocolitica W22703] Length = 266 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 81/248 (32%), Gaps = 15/248 (6%) Query: 2 YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + ++ + + + +L +K+RG L G+ F+ +G GF Sbjct: 7 RRRVVLGMMAVALATGLNVKSYAAGDLLDQVKERGTLIVGLEGTYPPFSFQGEDGKLTGF 66 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VDF AL+ + + P +L+SK+ID+ + R+ F Sbjct: 67 EVDFANALAEHMGVKA---KITPTKWDGMLASLESKRIDVAINQVTISDERKK--KYDFS 121 Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G + K S L G + V G+ E L + K ++ Sbjct: 122 TPYTVSGIQVLTKKGNEGKFSKPEDLVGKKVGVGLGSNYEQWLRENLK----GVDIRTYD 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R R DA D L AL L + ++ A+ + + E Sbjct: 178 DDPTKYQDLRVGRTDAILVDR--LAALDLVKKTNDTLTVAGPAFARQESGVALRKNNPEL 235 Query: 238 YNIVSWTH 245 ++ Sbjct: 236 LAAINQAI 243 >gi|241113597|ref|YP_002973432.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861805|gb|ACS59471.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 261 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 94/283 (33%), Gaps = 25/283 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + F +I L F ++ A L DI RG L+ + F V + G+D+D Sbjct: 4 RRVFFAIATLAATFGFGSASYADALADITARGTLRVAVPQDFPPFGSVGTDMAPMGYDID 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 ++ + + + + R LQ+ ++D++ + RE + F Sbjct: 64 VANLIAEKLGVKTELVP---VTSANRVPYLQTNKVDLVISSLGKNAEREKV--IDFTTAY 118 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G I+ V L+G SI V G +L L A +E Sbjct: 119 APFFNGVFAPADVSIAKVEDLAGKSIGVTRGAVEDLELTKIAPA---DATIKRYEDNNGT 175 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +A+ + + D A+ P + + +I SP + + T V+ Sbjct: 176 ISAFLSGQVDTIATGNVVAAAILA--KNPPKRPEMKFLIKNSPCYIGLNKEQTALLEKVN 233 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285 A T L Q++LG D S++ Sbjct: 234 GIIAAAKTDGALNAIS---------------QKWLGADLPSDL 261 >gi|71737270|ref|YP_272645.1| cystine transporter subunit [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557823|gb|AAZ37034.1| cystine ABC transporter, periplasmic cystine binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322114|gb|EFW78210.1| cystine transporter subunit [Pseudomonas syringae pv. glycinea str. B076] gi|320330786|gb|EFW86760.1| cystine transporter subunit [Pseudomonas syringae pv. glycinea str. race 4] gi|330872001|gb|EGH06150.1| cystine transporter subunit [Pseudomonas syringae pv. glycinea str. race 4] Length = 265 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 85/265 (32%), Gaps = 13/265 (4%) Query: 2 YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S L L++ + L IK G L G+ F+ V NG GF+ Sbjct: 7 RRTFLFSALGLMLGTGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + + P AL SK++D++ + R+ + Sbjct: 67 VEFSEALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISEERKKKYDFSEPY 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + I + L+G + V GT E L K + ++ Sbjct: 124 TVSGIQALVLKKNADTIKTAKDLTGKKVGVGLGTNYEQWL----KENVPGAIVKTYDDDP 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 R DA D A + V D S+ A+ +G+ E Sbjct: 180 SKIQDLSVGRIDAILVDRLAALEMATKTKNK--LVPAGDAFSRQESGIALRKGEPELQAA 237 Query: 241 VSWTHY---AMVTAEELGITQKNIN 262 + A T E+L N + Sbjct: 238 IDKAIDKLRANGTLEKLSKKYFNAD 262 >gi|288922652|ref|ZP_06416828.1| extracellular solute-binding protein family 3 [Frankia sp. EUN1f] gi|288346010|gb|EFC80363.1| extracellular solute-binding protein family 3 [Frankia sp. EUN1f] Length = 323 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 89/226 (39%), Gaps = 9/226 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 S + ++ G + G F G +GFDV+ + +++A+ K++++ Sbjct: 74 GSTMAKLQSGGTITVGTKFDQPLFGLKNLRGVPEGFDVEIAKIITNALGIPADKVKFVET 133 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQ 142 + R +Q ++D++ R+ + F Y GQ ++ + I+ Sbjct: 134 VSVNREPFIQQHKVDMVVATYTINDKRK--QVVDFAGPYYVAGQTLMVRAGESAITGKDS 191 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++C +G+T + ++F+ + A + + DA T D + L Sbjct: 192 LAGKNVCSVSGSTPAERIRTEAPQAK----LVLFDVYSKCAEALKNGQVDAVTTDNAILL 247 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 L + P ++ S P I +GD E+ ++ T A Sbjct: 248 GL--MDSDPGTFKLVGKPFSTEPYGIGIAKGDDEFRTFINETLTAA 291 >gi|313139914|ref|ZP_07802107.1| glutamate-binding protein of ABC transporter system [Bifidobacterium bifidum NCIMB 41171] gi|313132424|gb|EFR50041.1| glutamate-binding protein of ABC transporter system [Bifidobacterium bifidum NCIMB 41171] Length = 279 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 94/265 (35%), Gaps = 17/265 (6%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 + + + + G ++ GI G +G + GFDVD + ++ Sbjct: 22 VACAMSLAACGAD--------ESGKIRIGIKFDQPGLGFK-KSGTYVGFDVDVAKYVAKK 72 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + +I + +K+R LQ+ +D++ T R+ ++F + GQ + Sbjct: 73 LGYSEDEIVWKEAPSKQREAMLQNGDVDMILATYSITDERK--NAVSFAGPYFVAGQDLL 130 Query: 131 MHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + K I+ L+G +C G+T+ T+ F + + + E A + Sbjct: 131 VRKDDHSINGPEDLNGKRLCSVTGSTSAATVKKKFAS---EVQLMEQPGYAECATALFSG 187 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 DA T D L L + ++ ++ I +GDT ++ M+ Sbjct: 188 IVDAVTTDDIILAGLASASRGK--LRVVGKPFTQEYYGVGIKKGDTALAKKINAAIAEMI 245 Query: 250 TAEELGITQKNINQVSKDTTNPDVQ 274 + + + T N + Sbjct: 246 KDGSWERAIADNTEGTSYTPNAEYN 270 >gi|283455613|ref|YP_003360177.1| glutamine-binding protein glnH [Bifidobacterium dentium Bd1] gi|283102247|gb|ADB09353.1| glnH Glutamine-binding protein glnH [Bifidobacterium dentium Bd1] Length = 276 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 11/218 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +IKK G LK + + F V +G++ G+DV F L+ + Y ++ Sbjct: 30 TLDEIKKSGELKVAVFSDKAPFGYVDKDGNYAGYDVYFAERLAKDLGVKA---AYTSVDP 86 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 R L S ++D+ N T R+ + F G + + I+ VSQL G Sbjct: 87 AARVDVLTSNKVDVTLANFTVTDERKE--KVDFAKPYMKVALGVVSPEGAEITDVSQLKG 144 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ V GTT E F+ + +++ + A R DA++ D + + A Sbjct: 145 KTLIVAKGTTAETY----FEKNEPDIKLQKYDQYADAYNALLDGRGDAFSTDNTEVLAWA 200 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 V + + + +APA+ +G+ E + ++ Sbjct: 201 --KSNKGFKVGITKLGDEDTIAPAVQKGNKELLDWINE 236 >gi|257481900|ref|ZP_05635941.1| cystine transporter subunit [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331009533|gb|EGH89589.1| cystine transporter subunit [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 265 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 78/245 (31%), Gaps = 10/245 (4%) Query: 2 YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S L L++ + L IK G L G+ F+ V NG GF+ Sbjct: 7 RRTFLFSALGLMLGTGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + + P AL SK++D++ + R+ + Sbjct: 67 VEFSEALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISEERKKKYDFSEPY 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + I + L+G + V GT E L K + ++ Sbjct: 124 TVSGIQALVLKKNADTIKTAKDLTGKKVGVGLGTNYEQWL----KENVPGAIVKTYDDDP 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 R DA D A + V D S+ A+ +G+ E Sbjct: 180 SKIQDLSVGRIDAILVDRLAALEMATKTKNK--LVPAGDAFSRQESGIALRKGEPELQAA 237 Query: 241 VSWTH 245 + Sbjct: 238 IDKAI 242 >gi|15600269|ref|NP_253763.1| binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|116053223|ref|YP_793545.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|218894175|ref|YP_002443044.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254238217|ref|ZP_04931540.1| hypothetical protein PACG_04343 [Pseudomonas aeruginosa C3719] gi|254244042|ref|ZP_04937364.1| hypothetical protein PA2G_04876 [Pseudomonas aeruginosa 2192] gi|313110115|ref|ZP_07796017.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] gi|9951369|gb|AAG08461.1|AE004920_11 probable binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|115588444|gb|ABJ14459.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126170148|gb|EAZ55659.1| hypothetical protein PACG_04343 [Pseudomonas aeruginosa C3719] gi|126197420|gb|EAZ61483.1| hypothetical protein PA2G_04876 [Pseudomonas aeruginosa 2192] gi|218774403|emb|CAW30220.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|310882519|gb|EFQ41113.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] Length = 266 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 88/250 (35%), Gaps = 14/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L + L + A + D KRG L+ G++ + F G GF+ Sbjct: 1 MKKYLASLVLGVCALVGVASVQAAGAVEDAVKRGTLRVGMDPTYMPFEMTNKRGQIIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ ++ + + AL + + D++ T R +L L F Sbjct: 61 VDLLKAMAKSMGVK---LELVSTSYDGIIPALLTDKFDMIGSGMTLTQER--NLRLNFSE 115 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K+ I S L+ + + TT E+ F Sbjct: 116 PFIVVGQTLLVRKELEGKIKSYKDLNDPQYSITSKIGTTGEIVARKLISKAKYHG----F 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + E + DA+ D V L + PLA + +GD + Sbjct: 172 DNEPEAVMDVVNGKADAFIYDSPYNVVAVSKFGAGK-LVYLDQPFTYEPLAFGLKKGDYD 230 Query: 237 WYNIVSWTHY 246 N ++ + Sbjct: 231 SINFINNFLH 240 >gi|315647912|ref|ZP_07901013.1| extracellular solute-binding protein family 3 [Paenibacillus vortex V453] gi|315276558|gb|EFU39901.1| extracellular solute-binding protein family 3 [Paenibacillus vortex V453] Length = 255 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 91/248 (36%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S+L +L T ++S G L GI+ + + GFD Sbjct: 1 MKK--IASVLAGFMLLLTVVGCSSSSGGG----NELVVGIDDKFAPMGFRDESNEIVGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D+ RA + + + +++ P++ K + L S +ID++ T R+ + F Sbjct: 55 IDYARAAAEKMGKE---VKFQPIDWKAKESELSSGRIDLIWNGYTITDERKE--KVLFTK 109 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q + ISS+ L+G I +Q+ ++ L+ + H F Sbjct: 110 PYLENSQVVAVLSDSAISSIQDLAGKQIGLQSLSSAADALSAN-EIHAQVEKISEFPDNV 168 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + R DA D + + + IL + ++ + +G+ E Sbjct: 169 LALSDLKNGRVDAVVIDEVVMKYYMSKEE--GTYKILEESLAPEQYGIGVKKGNEELLES 226 Query: 241 VSWTHYAM 248 + M Sbjct: 227 LQKALDEM 234 >gi|289673926|ref|ZP_06494816.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae FF5] gi|330971240|gb|EGH71306.1| extracellular solute-binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 264 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 96/241 (39%), Gaps = 4/241 (1%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 +L T + S L + KRG L G + + A+G +GFD+D R ++ +F+ Sbjct: 1 MLANTVQAAEGSKLDAVLKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIAKGLFN 60 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DPSK++++ ++ R L + ++DI + T R + +AF Y +G ++ Sbjct: 61 DPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPYYREGVALLLPA 118 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + L A V + + K ++ V+ + A + R D Sbjct: 119 NSKYKEIDDLKAAGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINSGRADT 178 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 D S+ L P + S A A+ +GD +W N V+ + +T E Sbjct: 179 AATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHEAMTGVE 236 Query: 254 L 254 Sbjct: 237 F 237 >gi|163802098|ref|ZP_02195994.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio sp. AND4] gi|159174239|gb|EDP59047.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio sp. AND4] Length = 256 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 86/250 (34%), Gaps = 23/250 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L ++ + S ++ GI F++ + +G GFD Sbjct: 1 MKKWLFAATLAAAVVSGAVQAKEWST---------VRFGIEGAYPPFSQTEPDGSLTGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + + + + +L +++ D + T R+ + F Sbjct: 52 VDMANALCAEMKVE---CEIVAQDWDGIIPSLLARKYDAIIAAMSITEERKK--RVDFTG 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +I K + + L G I VQ TT + L D + K + + + Sbjct: 107 KYALIPNKYIAKKGANL-DFNNLDGQKIAVQRATTHDKFLTDNY---GDKVEIVRYGSFD 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDT 235 E + R A GD SAL A L + + + ++ A+ + D Sbjct: 163 EAYLDLASGRVAAVLGDASALEAGVLNKEGGDAYEFVGPSLTDPKWFGEGFGIAVRKQDK 222 Query: 236 EWYNIVSWTH 245 + + Sbjct: 223 DLTKKLDAAI 232 >gi|302669343|ref|YP_003832493.1| amino acid ABC transporter substrate-binding protein [Butyrivibrio proteoclasticus B316] gi|302397007|gb|ADL35911.1| amino acid ABC transporter substrate-binding protein [Butyrivibrio proteoclasticus B316] Length = 255 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 86/252 (34%), Gaps = 21/252 (8%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K S+L + L + A G L G N F V +G+ Sbjct: 1 MKKKIISVVLASLLTVASLAGCGSAAKADTNNT---NGTLVVGTNAAFPPFEYVGDDGEP 57 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+ +A+ I D +Q + ++ S +ID+ T R+ + + Sbjct: 58 DGFDMALIKAVGEKIGMD---VQIQDMEFDSLVSSIGS-KIDVAIAGMTVTEERQKT--V 111 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y Q I+ K I++ L +I VQ GTT E +AD + + + Sbjct: 112 DFSESYYEAVQAVIVPKDSAIANADDLKNLTIGVQLGTTGE-FIADEIE----GVNVSAY 166 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGD 234 + + R D D + + D P A A+ +G+ Sbjct: 167 NKAVDAVNDLINGRLDCVIVDKNPAEVFGTQYSDKVNVLPGTD-FDFEPEFYAIALPKGN 225 Query: 235 TEWYNIVSWTHY 246 TE N ++ Sbjct: 226 TELANKINTAIQ 237 >gi|257888302|ref|ZP_05667955.1| extracellular solute-binding protein [Enterococcus faecium 1,141,733] gi|257824356|gb|EEV51288.1| extracellular solute-binding protein [Enterococcus faecium 1,141,733] Length = 271 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 35/237 (14%), Positives = 75/237 (31%), Gaps = 8/237 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +A I + + G++ V +G GFD+D +A+ + + Sbjct: 25 ASADNWAAINEEKKIVIGLDDTFVPMGFRDKDGKLTGFDIDLAKAVFEQYG---ITVDFQ 81 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P++ + L + ID++ T RE + F + Q I K+ GI+S Sbjct: 82 PIDWSMKEFELNNGTIDLIWNGYSKTPAREK--KVQFTKPYMENDQVLITPKESGITSFE 139 Query: 142 QLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 Q+ + Q G++ + K ++++ E ++ R D D Sbjct: 140 QMKNKRLGAQNGSSGYDVFTKQPEVLKERVKNQDAVLYDSFNEALIDLKSGRIDGLLMDK 199 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + + A + + D ++ + E Sbjct: 200 VYADYYLKQRNELEDFNMTKGSYESEDFAVGVRKSDDTLVKKINEAFDRLEKTGEFQ 256 >gi|302186282|ref|ZP_07262955.1| cystine transporter subunit [Pseudomonas syringae pv. syringae 642] Length = 265 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 87/245 (35%), Gaps = 10/245 (4%) Query: 2 YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S + L++ + L IK+ G L G+ F+ V +G GF+ Sbjct: 7 RRTFLFSAMGLMLSAGIAGQAMAGEQLQKIKESGTLNVGLEGTYPPFSFVDESGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + + P AL SK++D++ + R+ + Sbjct: 67 VEFSEALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSEPY 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + I + L+G + V GT E ++ KA+ ++ Sbjct: 124 TVSGIQALVLKKNEDAIKTAKDLTGKKVGVGLGTNYE----EWLKANVPGAIVKTYDDDP 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 R DA D L AL++ ++ V D S+ A+ +G+ E Sbjct: 180 SKIQDLSVGRIDAILVDR--LAALEMAAKTKNKLVPAGDAFSRQESGIALRKGEPELLAA 237 Query: 241 VSWTH 245 + Sbjct: 238 IDKAI 242 >gi|224823796|ref|ZP_03696905.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] gi|224604251|gb|EEG10425.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] Length = 259 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 80/250 (32%), Gaps = 18/250 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K I L ++ TS + A +L +++RG LK + F + GF+ Sbjct: 1 MKK----LIALLALIGATSHAFAADLLDTVQQRGTLKIALEGTYPPFNFKDKDQKLAGFE 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL+ + P + LQ + D++ T R+ F Sbjct: 57 VDLGTALAQKLKVKPE---FTTGEWSGLLAGLQGGKFDVVMNQVSITDKRKEV--FDFSQ 111 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I+ K + S+ L G + V T AD KA + Sbjct: 112 PYTISSAQLIVRKNEKRVFKSLDDLKGLKMGV----TQGSNYADMVKAQG-GIESKFYPS 166 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 EI + R DA D + P + ++ + +G+ ++ Sbjct: 167 AAEIFQDLASGRIDAAINDSLLIPFAIKEAKLPLKAGAAVGTTTQ--MGIPFAKGNPKFK 224 Query: 239 NIVSWTHYAM 248 + ++ Sbjct: 225 AAIDGALTSL 234 >gi|303228616|ref|ZP_07315442.1| bacterial extracellular solute-binding protein, family 3 [Veillonella atypica ACS-134-V-Col7a] gi|302516708|gb|EFL58624.1| bacterial extracellular solute-binding protein, family 3 [Veillonella atypica ACS-134-V-Col7a] Length = 270 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 82/246 (33%), Gaps = 10/246 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K V + + ++ F S + + D + + G++ G+ G D+ Sbjct: 4 KKIMAVGLAAVSMMAFVSGCGSDTKKADTQLPKKIVIGLDDSFPPMGFKDDKGEIVGLDI 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + + D +++ ++ + L+SK+ID+L + RE + F Sbjct: 64 DLAKEAAKRAGMD---VEFKAIDWSSKEAELKSKKIDVLWNGLTVSPEREK--NILFSDT 118 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 D Q ++ I S L+G + VQ +T E L + + + Sbjct: 119 YMKDKQYIVVRNDDNAIKGKSDLAGKVVGVQQASTGESALQND-PSGKTVKEIKSYADFV 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYN 239 R DA D A L P ++ I+ A + DT + Sbjct: 178 SAFMDLGIGRVDAVIADGVI--ARYLMTKEPGKYKIVEGTDYGVDNFAVGFRKDDTALRD 235 Query: 240 IVSWTH 245 ++ Sbjct: 236 KINSIL 241 >gi|224371640|ref|YP_002605804.1| putative ABC-type amino acid transport-system, periplasmatic component [Desulfobacterium autotrophicum HRM2] gi|223694357|gb|ACN17640.1| putative ABC-type amino acid transport-system, periplasmatic component [Desulfobacterium autotrophicum HRM2] Length = 299 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 106/252 (42%), Gaps = 9/252 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWK 57 M K L L +L + S I+ I++ G ++ G + FA + +G+ Sbjct: 1 MIKKIINIGLTLFLLIICGAAPGGSDEIMDRIERTGIIRIGFRQDAIPFAYLDPVSGEHI 60 Query: 58 GFDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GF VD L+ + F +IQ + +N + R + +ID+ ++ + L RE Sbjct: 61 GFSVDMAGLLAENLSKHFRKKIRIQPVVINTENRIPLIVKHEIDVEMGSSTYNLERE--Q 118 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK-AHNMKYHP 173 + F + + F++ + I ++ ++G ++ AGTT L + + Sbjct: 119 TVDFSLMFFISETTFMVRSQSAIRTMDDINGKTVGAAAGTTNLSALQSMVQIKRLKSVNI 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + + + + DA D + L +++ + P+ IL IS P A + + Sbjct: 179 KIIKTISQGFTDLKKGVIDALCLDRTLLNVMRIKDSDPNALTILNFAISYEPYAYIVPEN 238 Query: 234 DTEWYNIVSWTH 245 ++++ + ++ T Sbjct: 239 NSDFRDFLNNTI 250 >gi|193077070|gb|ABO11828.2| putative ABC transporter [Acinetobacter baumannii ATCC 17978] Length = 236 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 93/208 (44%), Gaps = 8/208 (3%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ G+ + F + A G +GFDV+ + ++ + D +K++++ A R L++ Sbjct: 2 VRIGVFSDKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVEFVLTEAANRVEYLKAN 61 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++DI+ N T R+ + F G + K I+ V+QL ++ V GTT Sbjct: 62 KVDIIFANFTVTPERKEV--VDFAKPYLKVALGVVSPKSHPITDVAQLKDKTLLVNKGTT 119 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 + +F + + +E+ E A + R A D + A + P+ V Sbjct: 120 ADS----FFTKTHPEIKLQKYEQNTETFDALKDGRGAALAHDNLLVLAWA--KENPNYTV 173 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + ++ + +APA+ +GD E N ++ Sbjct: 174 GITNLGEQDLIAPAVKKGDKELLNWLNQ 201 >gi|116248754|ref|YP_764595.1| putative substrate-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115253404|emb|CAK11792.1| putative substrate-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 261 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 94/283 (33%), Gaps = 25/283 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + F +I L F ++ A L DI RG L+ + F V + G+D+D Sbjct: 4 RRVFFAIATLAATFGFGSASYADALADITARGTLRVAVPQDFPPFGSVGTDMAPMGYDID 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 ++ + + + + R LQ+ ++D++ + RE + F Sbjct: 64 VANLIAEKLGVKTELVP---VTSANRVPYLQTNKVDLVISSLGKNAEREKV--IDFTTAY 118 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G I+ V L+G SI V G +L L A +E Sbjct: 119 APFFNGVFAPADVSIAKVEDLAGKSIGVTRGAVEDLELTKIAPA---DATIKRYEDNNGT 175 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +A+ + + D A+ P + + +I SP + + T V+ Sbjct: 176 ISAFLSGQVDTIATGNVVAAAILS--KNPPKRPEMKFLIKNSPCYIGLNKEQTALLEKVN 233 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285 A T L Q++LG D S++ Sbjct: 234 GIIAAAKTDGALNAIS---------------QKWLGADLPSDL 261 >gi|291561845|emb|CBL40645.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SS3/4] Length = 286 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 86/268 (32%), Gaps = 31/268 (11%) Query: 1 MYKDFFVSILC-LIILFFTSFS----------------------TNASILGDIKKRGFLK 37 M K +++ ++L + + G L Sbjct: 1 MKKRLLSAVMASAMVLSLAACGGAKTETTAAETTAEKKEETTTAGTTAAETAEAAGGTLI 60 Query: 38 CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 G + V NG++ GFD+D + ++S + + P+ + + L+S I Sbjct: 61 VGFDQDFPPMGFVGDNGEYTGFDLDLAKEVASRLGLEYKA---QPVAWDSKDMELESGNI 117 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 D + T + + + Q F++ I S + L+G + VQA ++ E Sbjct: 118 DCIWNGFTITGRED---DYTWTTPYMANKQVFVVANDSDIKSQADLAGKVVEVQADSSAE 174 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 L + N + DA D + A R ++ IL Sbjct: 175 AALKENQDLANTFGQLLTTPDYNTAFMDLEQGAVDAVAMD--VIVAGYQIKQRNADFKIL 232 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D +S+ +G+TE + V Sbjct: 233 DDSLSEEEYGVGFKKGNTELRDKVQGAL 260 >gi|296274364|ref|YP_003656995.1| family 3 extracellular solute-binding protein [Arcobacter nitrofigilis DSM 7299] gi|296098538|gb|ADG94488.1| extracellular solute-binding protein family 3 [Arcobacter nitrofigilis DSM 7299] Length = 268 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 85/237 (35%), Gaps = 13/237 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L++ N ++ LK G+ F +G+ G Sbjct: 1 MKKLLFAILSSLLVFILAGCGENEK--EQKSEKKVLKVGMELAYPPFEMSDKDGNPSGVS 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF +AL + D + + +L++ +ID++ + T R+ + F Sbjct: 59 VDFAKALGKYLGRD---VVIENIAWDGLIPSLKTGKIDLIISSMTITDERKK--SIDFSI 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + +K GI S+ L+ G ++ V+ G+T + ++ N +VF++ Sbjct: 114 PYAQSSLAILANKDSGIKSIDDLNVKGKTVAVKKGSTGHIYAKEHLPNAN----VLVFDK 169 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + D + D +Y + + ++ P A+ +G Sbjct: 170 EAACVLEVVQGKADGFIYDQLTIYKNYAKHMDTTVPLLQPFQKDFEYWGVALKKGSP 226 >gi|258540197|ref|YP_003174696.1| amino acid ABC transporter substrate-binding periplasmic protein [Lactobacillus rhamnosus Lc 705] gi|257151873|emb|CAR90845.1| ABC transporter, amino acid-binding periplasmic protein [Lactobacillus rhamnosus Lc 705] Length = 274 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 80/226 (35%), Gaps = 9/226 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + IL + K + G+ F + G +GFDVD +A++ I Q Sbjct: 29 ADRDILTNAKATNTIIWGVKADTRLFGLMNIKTGKIEGFDVDMAKAITKQILGKKGNAQL 88 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + + R ++ +D + T R+ L F + + GQ ++ K I SV Sbjct: 89 VQVTSDTRVPMIKGGNLDAVIATMTITPERQKI--LDFSDVYFNAGQSLLVKKGSPIKSV 146 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L + + + D K + + A ++ + DA T D Sbjct: 147 KDLKKGTKVIGVQGS---NSVDNVKKAAPDTTVLQLADYAQAFTALKSGQGDALTTDNGI 203 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 LY + + +++ +K P AI +G + V+ Sbjct: 204 LYGMSEQDKN---YIVTGGTFTKEPYGIAINKGQKPFVKAVNKAIK 246 >gi|182438660|ref|YP_001826379.1| putative ABC transporter solute-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178467176|dbj|BAG21696.1| putative ABC transporter solute-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 351 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 80/242 (33%), Gaps = 15/242 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFD 73 S + + IK+RG L G++ + + +GFD+D RA++ + Sbjct: 76 ASLPPSSADGPGVEKIKQRGKLIAGVDQNSFRWGYRNPEARELEGFDIDLVRAIAKDVLG 135 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DP + + + +R AL++ ++D++ R R ++F + GQ + K Sbjct: 136 DPDAVIFRAIPTNQRIAALENDRVDVVVRTMTINCKR--LEQVSFSTAYFQAGQQVLAPK 193 Query: 134 KKGISSVSQ-LSGASICVQAGTTTELTL---------ADYFKAHNMKYHPIVFERVEEID 183 I+ L G +C G+T L D F + + Sbjct: 194 GSTITGYDASLKGKRVCSAEGSTAYEALEKKSFGALYKDDFDGTARDPDLLTVPNQLDCL 253 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + DA D + P+ + + A +G + V+ Sbjct: 254 VRLQLGEVDAVVTDNALAAGQAAQ--DPAVELKGKAPFTTEYYGVATKKGADDLVARVNK 311 Query: 244 TH 245 Sbjct: 312 VL 313 >gi|227824561|ref|ZP_03989393.1| periplasmic glutamine-binding protein [Acidaminococcus sp. D21] gi|226905060|gb|EEH90978.1| periplasmic glutamine-binding protein [Acidaminococcus sp. D21] Length = 263 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 81/256 (31%), Gaps = 12/256 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFD 60 K IL +++ S N+ +++ L G F +G+ GFD Sbjct: 6 KKLALTGILAAVVVTSLSGCGNSGSKDAAQQKKELIVGTEPSFAPFEFPDGKDGEITGFD 65 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + + + + F A+ + QID+ T R+ F Sbjct: 66 MDLIKAMAKKMGYEK--VTIKGMGFDALFPAMNAGQIDVAMAGMSITEERKK--QFLFTD 121 Query: 121 ITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G + I S++ L G I VQ GTT A F+ Sbjct: 122 PYYESGLMTIVRKDNTVIHSLADLKGKRIGVQLGTTGAQEAEKIEGAK-----VTNFDTS 176 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + DA D+ L L S + A +G E + Sbjct: 177 DLACLELKNGNVDAVISDLPVLE-YFLKKGGASYAKTVGTPKKGDFYGIAAPKGKKELID 235 Query: 240 IVSWTHYAMVTAEELG 255 ++ + + E Sbjct: 236 GLNKALKELKDSGEYQ 251 >gi|56421988|ref|YP_149306.1| amino acid ABC transporter substrate-binding protein [Geobacillus kaustophilus HTA426] gi|56381830|dbj|BAD77738.1| amino acid ABC transporter (substrate-binding protein) [Geobacillus kaustophilus HTA426] Length = 273 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 80/260 (30%), Gaps = 15/260 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL----GDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K V+++ + + + + + + + + G + F ++ G Sbjct: 4 MKKGLIVAVVAALFMALAACGKSTETSSPSGAEKEGKQKITVGTDAAFAPFEYMQ-KGKI 62 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD D A+ D + F +LQSK+ID+ T R+ Sbjct: 63 VGFDADLLDAVMKEAGLDYE---LKNIGWDPLFASLQSKEIDMGISGITITDERK--QSY 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + Q ++ + + + L G +I VQ TT + F H F Sbjct: 118 DFSAPYFEATQVILVKQGSPVKNALDLKGKTIGVQNATTGQEAAEKLF---GKGDHIKKF 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDT 235 E DA D + N VI P + + D+ Sbjct: 175 ETSVVAIMELLNGGVDAVITDNAVANEYVKNNPDKKLQVIEDPQNFASEYYGMIFPK-DS 233 Query: 236 EWYNIVSWTHYAMVTAEELG 255 E V ++ + + Sbjct: 234 ELKAKVDEALQKVIDSGKYA 253 >gi|134046501|ref|YP_001097986.1| extracellular solute-binding protein [Methanococcus maripaludis C5] gi|132664126|gb|ABO35772.1| amino acid ABC transporter substrate-binding protein, PAAT family [Methanococcus maripaludis C5] Length = 260 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 87/246 (35%), Gaps = 11/246 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K + ++ ++ F AS G L G + F E A+G+ GFD Sbjct: 5 KKLILLGLVVSLVAFSGCTEDQASAKGSMTMTEGILVVGTDPTFPPFEEKNADGELVGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + IQ++ AL++++ D + T R + F Sbjct: 65 IDLMNALGEKMGIE---IQFVEQPFDGIIPALKAEKFDCIISAVTITDDRAKEVA--FTN 119 Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ + SV L+G + Q GTT E Y + +E + Sbjct: 120 SYFDAAQVIAVLIDDDSVQSVDDLAGKVVAAQLGTTGEYEAQHYAEELGF--EIKSYEVM 177 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R +A D A + + +P + ++ + ++ A + E + Sbjct: 178 ADAFIDMENGRVNAVVTDD--GVAQRFLDTKPGVYKVVGEPMTSESYGLAANLDNQELID 235 Query: 240 IVSWTH 245 ++ Sbjct: 236 ALNNAL 241 >gi|42522401|ref|NP_967781.1| glutamine transport system substrate-binding protein [Bdellovibrio bacteriovorus HD100] gi|39574933|emb|CAE78774.1| Glutamine transport system substrate-binding protein [Bdellovibrio bacteriovorus HD100] Length = 262 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 82/256 (32%), Gaps = 14/256 (5%) Query: 1 MYKDFFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + + CL+++ S A + L G + F A+ Sbjct: 1 MKRLSLLITSCLLLMTLGCTKKESGTADTAAKTSAKKELTVGTDAAYAPFEIENADKSIS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD++ +A+++ + + + F L+S DIL R+ ++ Sbjct: 61 GFDIEIIQAIAAK---QGLTLNIVNTPWEGLFSQLESGDRDILISAITINDERKKTM--D 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + Q + +S L + VQ GTT + + + FE Sbjct: 116 FSEPYFDAVQLIAVPNSSKVSKFDDLKKLKVGVQIGTTGDEVVTRLLGRA--SSNIKRFE 173 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTE 236 DA D + P + +L D K A+ +G+T+ Sbjct: 174 GTPLALQELINGGVDAVVADNGVINNFFAN--NPKDFKVLSDTTFSKEQYGIAVKKGNTD 231 Query: 237 WYNIVSWTHYAMVTAE 252 ++ A + A+ Sbjct: 232 LLKKINDGL-AAIKAD 246 >gi|190894698|ref|YP_001984991.1| putative amino acid ABC transporter substrate-binding protein [Rhizobium etli CIAT 652] gi|218511056|ref|ZP_03508934.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli Brasil 5] gi|218517081|ref|ZP_03513921.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli 8C-3] gi|190700359|gb|ACE94441.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] gi|327192281|gb|EGE59246.1| putative amino acid ABC transporter, substrate-binding protein [Rhizobium etli CNPAF512] Length = 261 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 93/283 (32%), Gaps = 25/283 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + F +I L F + ++A L DI RG L+ + F V + G+D+D Sbjct: 4 RRVFFAIATLAATFGFNAPSHADALADITARGTLRVAVPQDFPPFGSVGTDMAPMGYDID 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 ++ + + + + R LQ+ ++D++ + RE + F Sbjct: 64 MANLIAEKLGVKAELVP---VTSANRVPYLQTNKVDLVISSLGKNPDREKV--IDFSVAY 118 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G ++ L+G SI V G +L L +E Sbjct: 119 APFFNGVFAPADLAVAKAEDLAGKSIGVTRGAVEDLELTKIAP---TDATIKRYEDNNGT 175 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 +A+ + + D A+ P + L +I SP + + + V+ Sbjct: 176 ISAFLSGQVDIIATGNVVAAAILA--KNPPKRPELKFLIKNSPCYIGLNKEQSALLEKVN 233 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285 A T L Q++LG D S++ Sbjct: 234 GIIAAAKTDGTLNAIS---------------QKWLGADLPSDL 261 >gi|330957137|gb|EGH57397.1| extracellular solute-binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 261 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 91/261 (34%), Gaps = 11/261 (4%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + +A+ L D+ RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQTPAHANGLDDVMARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + F Sbjct: 61 DIDTAQLLADKL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + ++ L G +I V G ++ L++ FE Sbjct: 116 RAYAPFYLAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSNVAPE---GATIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A ++ P L + SP+ + +G E Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLG 230 Query: 240 IVSWTHYAMVTAEELGITQKN 260 V+ A L + Sbjct: 231 KVNEILNAAKADGSLEKASQT 251 >gi|238764882|ref|ZP_04625822.1| Cystine-binding periplasmic protein [Yersinia kristensenii ATCC 33638] gi|238696901|gb|EEP89678.1| Cystine-binding periplasmic protein [Yersinia kristensenii ATCC 33638] Length = 266 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 84/253 (33%), Gaps = 15/253 (5%) Query: 2 YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + ++ + + + + +L +K+RG L G+ F+ +G GF Sbjct: 7 RRQMVLGMVAVALAIGLNVKSYAASDLLDQVKERGTLIVGLEGTYPPFSFQGEDGKLTGF 66 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VDF AL+ + + P +L+SK+ID+ + R+ F Sbjct: 67 EVDFANALAQHMGVKA---KITPTKWDGMLASLESKRIDVAINQVTISDERKK--KYDFS 121 Query: 120 PITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G + K S L G + V G+ E L + K ++ Sbjct: 122 TPYTVSGIQVLTKKGNEGNFSKPEDLVGKKVGVGLGSNYEQWLRENLK----GVDIRTYD 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R R DA D L AL L + + ++ A+ + + E Sbjct: 178 DDPTKYQDLRVGRTDAILVDR--LAALDLVKKTNNTLAVAGPAFARQESGIALRKNNPEL 235 Query: 238 YNIVSWTHYAMVT 250 ++ M Sbjct: 236 LAAINKAIAEMQE 248 >gi|229553193|ref|ZP_04441918.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus rhamnosus LMS2-1] gi|229313489|gb|EEN79462.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus rhamnosus LMS2-1] Length = 294 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 80/226 (35%), Gaps = 9/226 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + IL + K + G+ F + G +GFDVD +A++ I Q Sbjct: 49 ADRDILTNAKATNTIIWGVKADTRLFGLMNIKTGKIEGFDVDMAKAITKQILGKKGNAQL 108 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + + R ++ +D + T R+ L F + + GQ ++ K I SV Sbjct: 109 VQVTSDTRVPMIKGGNLDAVIATMTITPERQKI--LDFSDVYFNAGQSLLVKKGSPIKSV 166 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L + + + D K + + A ++ + DA T D Sbjct: 167 KDLKKGTKVIGVQGS---NSVDNVKKAAPDTTVLQLADYAQAFTALKSGQGDALTTDNGI 223 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 LY + + +++ +K P AI +G + V+ Sbjct: 224 LYGMSEQDKN---YIVTGGTFTKEPYGIAINKGQKPFVKAVNKAIK 266 >gi|297156308|gb|ADI06020.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces bingchenggensis BCW-1] Length = 310 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 90/235 (38%), Gaps = 14/235 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++ K+RG+L G E G + GFD++ + +++++ DP +++ Sbjct: 56 SSPTWRKAKRRGYLVVGAKEDQPYLGEKDPATGRYSGFDIEIAKMMAASLGFDPKTVRFK 115 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSV 140 + + R ALQ+ QID LR+ +G F + GQ ++ + I Sbjct: 116 TIASANRETALQNGQIDYYVGTYTINPLRKRLVG--FAGPYFIAGQSLLVRTDEHDIHGP 173 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G ++C AG+T + + + H + ++ + + DA T D + Sbjct: 174 KDLAGKTVCSVAGSTPLMRIQSDYPKA----HAVAYDTYSVCVDNLISLQVDAVTTDNTI 229 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L P E ++ SK P + + D + + A E Sbjct: 230 LLGYAAKA--PKELKVVGKPFSKEPYGIGVPKKDNAL----RFALNDAIEANERN 278 >gi|297196054|ref|ZP_06913452.1| glutamate binding periplasmic protein [Streptomyces pristinaespiralis ATCC 25486] gi|297153047|gb|EDY67215.2| glutamate binding periplasmic protein [Streptomyces pristinaespiralis ATCC 25486] Length = 312 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 80/238 (33%), Gaps = 9/238 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 ++ L +K G L G G+ GFD++ + +++ + KI++ Sbjct: 58 DSPTLEKAQKAGKLVIGAKNDQPFLGFEDEKGNRSGFDIEIAKMIAADLGFSADKIEFKT 117 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVS 141 ++ R A+ + ++D+ R+ +AF Y G ++ + I+ Sbjct: 118 VDTGVREAAISNGEVDLYVGTYTINEERKK--KVAFAGPYYMAGADLLIREDDRTIAGPF 175 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G ++C G+T + + + E + DA T D + L Sbjct: 176 SLEGKTVCSAKGSTALREIKKPE----YNTRTVETAKYTECVQQLLEGKVDAVTTDDAIL 231 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 + ++ ++ P + + D + VS A + + Sbjct: 232 KGYAAQ--HAGKLKVVGQPFTEEPYGIGMAKDDEALRDAVSDALQAHDENGDYKLAYD 287 >gi|330900314|gb|EGH31733.1| extracellular solute-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 264 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 96/241 (39%), Gaps = 4/241 (1%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 +L T + S L + KRG L G + + A+G +GFD+D R ++ +F+ Sbjct: 1 MLANTVQAAEGSKLDAVSKRGNLVVGTGSTNAPWHFQGADGKLQGFDIDIGRIIAKGLFN 60 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DPSK++++ ++ R L + ++DI + T R + +AF Y +G ++ Sbjct: 61 DPSKVEFVVQSSDARIPNLLTDKVDISCQFITVTASR--AQQVAFTLPYYREGVALLLPA 118 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + L A V + + K ++ V+ + A + R D Sbjct: 119 NSKYKEIDDLKAAGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAINSGRADT 178 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 D S+ L P + S A A+ +GD +W N V+ + +T E Sbjct: 179 AATDQSS--VKYLMVQNPGRYRSPAFAWSPQTYACAVKRGDQDWLNFVNTALHEAMTGVE 236 Query: 254 L 254 Sbjct: 237 F 237 >gi|290963270|ref|YP_003494452.1| glutamine-binding protein precursor [Streptomyces scabiei 87.22] gi|260652796|emb|CBG75929.1| putative glutamine-binding protein precursor [Streptomyces scabiei 87.22] Length = 292 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 92/254 (36%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVKAN 53 + ++ CL++ S + + +RG GI F + + Sbjct: 4 RRSVLAALTCLVLGSCGLPGEEGPGSRFPEGSTMARVAERGVFTVGIKFDHPLFGYKEPS 63 Query: 54 -GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G GFD + R ++ + I+++ + R L+ +DI+ + R Sbjct: 64 TGRITGFDAEIARMVAKDLTGSERNIRFIETMPRNREDFLRRGVVDIVVATYSISEERRK 123 Query: 113 SLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + F Y+ Q ++ + I ++ L+G +C AG+T+ L Sbjct: 124 L--VDFTDPYYYSRQDVLVRSDERGIRDLADLAGRDVCTAAGSTSAQRLRGEVSRA---- 177 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ + E AA R DA + D S L L +P ++ + P A + Sbjct: 178 RLVIVDTYSECMAALVDGRIDAISTDESILLGLMSR--QPDTVRLVGKPFGREPYAIGVR 235 Query: 232 QGDTEWYNIVSWTH 245 +GDT + ++ Sbjct: 236 RGDTGLRDYLNGLI 249 >gi|119945248|ref|YP_942928.1| ABC transporter extracellular solute-binding protein [Psychromonas ingrahamii 37] gi|119863852|gb|ABM03329.1| ABC transporter extracellular solute-binding protein, family 3 [Psychromonas ingrahamii 37] Length = 275 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 84/251 (33%), Gaps = 7/251 (2%) Query: 1 MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M +S++ + +FS +A L D+ G L CG+ N GF Sbjct: 1 MKLVKKISLVVASMAAIGAFSTASADKLDDVINSGTLNCGVVLDFPPMGYTDKNNQPAGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD+C L+ + + I L +R +L S + D++ +T TL R S+G F Sbjct: 61 DVDYCNDLAKVLGVKSNVIN---LTWGDRIPSLISAKTDVVVGSTSDTLARAKSVG--FT 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFER 178 + + K ++S L + GTT E Y + F+ Sbjct: 116 YPYFVFKFQVLSKKGVKMTSFDDLKNVKVGAALGTTYEKEYFAYADDKGWGRDNYTSFKS 175 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + DA + + + + + + + + W Sbjct: 176 ENDAFLGLHQGKIDALISTNTNIATKLTSGQFDNFVAGPYVPNYDDVVGLIVKRSELAWK 235 Query: 239 NIVSWTHYAMV 249 + ++ + Sbjct: 236 SYLNLFLVHQI 246 >gi|329116401|ref|ZP_08245118.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus parauberis NCFD 2020] gi|326906806|gb|EGE53720.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus parauberis NCFD 2020] Length = 278 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 83/253 (32%), Gaps = 13/253 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K ++ + + + + S + KK + G + V +G Sbjct: 4 KKLILTAMTAFMAIILVACGSKESSTKSDGWANYKKTKTITLGFDNTFVPMGYKDESGKN 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDV+ +A+ K+++ P+N + L++ +ID++ T R+ + Sbjct: 64 TGFDVELAKAVFDQYG---IKVKFQPINWDLKETELKNGKIDMIWNGYSITKERQA--KV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHP 173 AF + Q + K I+S S + G + Q+G++ K Sbjct: 119 AFSNPYMKNEQVLVTKKSANITSFSGMKGKVLGAQSGSSGYDAFTSNPKVLKDIVKDKDA 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +E + ++ R D D + + I+ A + + Sbjct: 179 TQYETFTQAFIDLKSGRIDGLLIDKVYANYYLKQEGELANYNIVKSEYEGENFAVGVRKE 238 Query: 234 DTEWYNIVSWTHY 246 D ++ + Sbjct: 239 DKTLVKNLNKSLK 251 >gi|119387649|ref|YP_918683.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119378224|gb|ABL72987.1| amino acid ABC transporter substrate-binding protein, PAAT family [Paracoccus denitrificans PD1222] Length = 266 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 89/255 (34%), Gaps = 7/255 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + A L DI+ RG + G++ G F V + + G D Sbjct: 1 MTIRNLTLAALTAVGLAAALPAGADTLSDIRDRGTINIGVDIGQAPFGMVDGSMNQTGSD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD R L+ + + + + R L + ++D++ + T R+ + F Sbjct: 61 VDTARKLAEDLGVKLNVVS---VAPANRIPFLLTGKVDVVVASFSITEERKK--QVDFSK 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +S + L G I V +T + + D A+++K + ++ Sbjct: 116 PYAVSEVVVATTGGLELSGPADLEGRQIAVTRASTNDTLITDAIAANDVKATIVRYDDNA 175 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + + D Y S L + PS + ++ PLA + + + E + Sbjct: 176 MTTNAVLSGQHDVYVVAQSLLVPI--NEANPSRKIEPQFVLRTYPLAIGLRKNEPELKDW 233 Query: 241 VSWTHYAMVTAEELG 255 + + +L Sbjct: 234 LDNWVDENLANGKLN 248 >gi|94990605|ref|YP_598705.1| histidine-binding protein [Streptococcus pyogenes MGAS10270] gi|94544113|gb|ABF34161.1| Histidine-binding protein [Streptococcus pyogenes MGAS10270] Length = 278 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 78/251 (31%), Gaps = 13/251 (5%) Query: 2 YKDFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K + F + + G +K+ + G + V +G Sbjct: 4 KKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKC 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 KGFD+D + + K+ + +N + L + +ID++ T R + Sbjct: 64 KGFDIDLAKEVFHQYG---LKVNFQAINWDMKEAELNNGKIDVIWNGYSITKER--QDKV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI-- 174 AF + Q ++ K+ I ++S + + Q+ ++ L K Sbjct: 119 AFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDALLRTPKLLKDFIKNKDA 178 Query: 175 -VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +E + ++ R D D + + ++P + + + Sbjct: 179 NQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKE 238 Query: 234 DTEWYNIVSWT 244 D ++ Sbjct: 239 DKTLQAKINRA 249 >gi|241196118|ref|YP_002969673.1| amino acid ABC transporter periplasmic protein [Bifidobacterium animalis subsp. lactis DSM 10140] gi|240250672|gb|ACS47611.1| ABC-type amino acid transport system periplasmic component [Bifidobacterium animalis subsp. lactis DSM 10140] Length = 279 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 98/255 (38%), Gaps = 14/255 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + + + ++++ ++ GI G +G ++GFDV Sbjct: 11 RKAIAMVCAASALFGMAACGSSSADGEK-----KIRIGIKYDQPGLGFK-KSGTFEGFDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D R +++ + ++I++L +K+R LQ+ +D++ + T R+ ++F Sbjct: 65 DVARYVANQLGYTDAEIEFLEAPSKQREAMLQNGDVDMILATSSITDERKK--AVSFAGP 122 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + GQ ++ I+ L+G +C G+T+ + + F + + Sbjct: 123 YFVAGQDLMVRADDHSINGPEDLNGKRLCSVTGSTSAKVVKERFAK---EVQLMEQPGYA 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A + DA T D L L + ++ ++ I +GDT + Sbjct: 180 ECATALFSGIVDAVTTDDIILAGLASASRGK--LRVVGKPFTQEYYGVGIRKGDTAFAKQ 237 Query: 241 VSWTHYAMVTAEELG 255 ++ M+ + E Sbjct: 238 INAAIEDMIKSGEWE 252 >gi|27378960|ref|NP_770489.1| substrate-binding protein [Bradyrhizobium japonicum USDA 110] gi|27352110|dbj|BAC49114.1| blr3849 [Bradyrhizobium japonicum USDA 110] Length = 302 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 88/259 (33%), Gaps = 8/259 (3%) Query: 4 DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 IL L L + + + + L +K+ + G V F+ + N GF +D Sbjct: 2 RLPTVILALTCLAGAASAEDLSGTLQKVKETKKITLGYQEASVPFSYLDGNQKPVGFAMD 61 Query: 63 FC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C A+ + ++ L + + R + + +D+ T R+ + F Sbjct: 62 ICLKIVDAVKKQLGMPDIVVETLAVTSSNRIPLMVNGTLDLHCSATTNNADRQKQVA--F 119 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + F K I+++ L G ++ AG+ LA + + + + Sbjct: 120 TNTHFLSATRFAAKKAAKINTIDDLKGKAVTAVAGSVNLTQLAKVNTERTLGINIMPAKD 179 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEW 237 E R AY D L + P+ +I + SK P + + D + Sbjct: 180 QAEAFLLLETDRAQAYALDDVQLAVAIARSKEPALFMISEETFSKPEPYGIMLRREDAPF 239 Query: 238 YNIVSWTHYAMVTAEELGI 256 + + + E+ + Sbjct: 240 KALADRATAELYASPEIEV 258 >gi|313123646|ref|YP_004033905.1| amino acid ABC transporter substrate-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280209|gb|ADQ60928.1| Amino acid ABC transporter substrate-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 286 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 99/262 (37%), Gaps = 32/262 (12%) Query: 1 MYKD----FFVSILCLIILFFTS----------FSTNASILG------DIKKRGFLKCGI 40 M K + I+ LI++ + T S +IK+RG+++ + Sbjct: 1 MKKKNIFNIIMGIVALIVVVSAAYFGFTQPNLNSGTAGSRWSNENGVSEIKRRGYIRVAV 60 Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 L + V G G+DV R ++ + KI+++ +NA R L S + DI+ Sbjct: 61 FGDLPPYGWVNDQGKRVGYDVYLVRRIAKDL---NVKIRFIQVNANNRVDTLNSNKADIV 117 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 N T R+ + F G I K I+S +L G + V GTT E Sbjct: 118 LANFTVTPERK--DVVDFAKPYMKVSVGVISPKNAPINSAQELKGKKLIVTKGTTAENYF 175 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 A + + F+ + A + R A D S LYA P V + I Sbjct: 176 -----AKQSGVNLLKFDSKTQQFNALKNGRGAALADDNSYLYAW--VKKNPKYVVGIKSI 228 Query: 221 ISKSPLAPAIIQGDTEWYNIVS 242 + +APA+ +G+ + Sbjct: 229 GPRQYVAPAVKKGNRSLLKWTN 250 >gi|310287212|ref|YP_003938470.1| Glutamate-binding protein GluB [Bifidobacterium bifidum S17] gi|311064072|ref|YP_003970797.1| Glutamate-binding protein GluB [Bifidobacterium bifidum PRL2010] gi|309251148|gb|ADO52896.1| Glutamate-binding protein GluB [Bifidobacterium bifidum S17] gi|310866391|gb|ADP35760.1| Glutamate-binding protein GluB [Bifidobacterium bifidum PRL2010] Length = 279 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 94/265 (35%), Gaps = 17/265 (6%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 + + + + G ++ GI G +G + GFDVD + ++ Sbjct: 22 VACTMSLAACGAD--------ESGKIRIGIKFDQPGLGFK-KSGTYVGFDVDVAKYVAKK 72 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + +I + +K+R LQ+ +D++ T R+ ++F + GQ + Sbjct: 73 LGYSEDEIVWKEAPSKQREAMLQNGDVDMILATYSITDERK--NAVSFAGPYFVAGQDLL 130 Query: 131 MHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + K I+ L+G +C G+T+ T+ F + + + E A + Sbjct: 131 VRKDDHSINGPEDLNGKRLCSVTGSTSAATVKKKFAS---EVQLMEQPGYAECATALFSG 187 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 DA T D L L + ++ ++ I +GDT ++ M+ Sbjct: 188 IVDAVTTDDIILAGLASASRGK--LRVVGKPFTQEYYGVGIKKGDTALAKKINAAIAEMI 245 Query: 250 TAEELGITQKNINQVSKDTTNPDVQ 274 + + + T N + Sbjct: 246 KDGSWERAIADNTEGTSYTPNAEYN 270 >gi|251781981|ref|YP_002996283.1| amino acid ABC transporter amino acid-binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390610|dbj|BAH81069.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 268 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 16/251 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANG- 54 M K + I L+ L S S + ++L I K+G L+ G+ + F Sbjct: 3 MKKYSLLVICFLLTLICPSLSQASELTTPNVLKQITKKGQLRIGVKQDVPNFGYYHPKHR 62 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 ++G ++D + ++ A+ P Q+ + A+ R L ++Q+D++ T E Sbjct: 63 QFEGMEIDIAKKIAKALNVKP---QFTAVTAQTREALLDNQQLDMIIATYTITP--ERQK 117 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 AF Y D GF++ K I+S+ +L +I V G+TT+ + +Y KAH++ + + Sbjct: 118 QYAFSNPYYLDEIGFLVKKSDAITSIKELDQKTIGVAQGSTTKNAIEEYGKAHDLSFSFV 177 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E+ + A+R +++ D S L IL + ++ A + + Sbjct: 178 QLGSYPELAISLYANRIASFSVDKSILSGYTNQKT-----TILTEGFNQQAYGVATTKSN 232 Query: 235 TEWYNIVSWTH 245 ++ Sbjct: 233 KALITHINKLL 243 >gi|139473662|ref|YP_001128378.1| putative amino acid ABC transporter,extracellular amino acid-binding protein [Streptococcus pyogenes str. Manfredo] gi|306827255|ref|ZP_07460542.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pyogenes ATCC 10782] gi|134271909|emb|CAM30147.1| putative amino acid ABC transporter,extracellular amino acid-binding protein [Streptococcus pyogenes str. Manfredo] gi|304430402|gb|EFM33424.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pyogenes ATCC 10782] Length = 278 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 79/251 (31%), Gaps = 13/251 (5%) Query: 2 YKDFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K + F + + G +K+ + G + V +G Sbjct: 4 KKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKC 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 KGFD+D + + K+ + +N + L + +ID++ T R + Sbjct: 64 KGFDIDLAKEVFHQYG---LKVNFQAINWDMKEAELNNGKIDVIWNGYSITKER--QNKV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI-- 174 AF + Q ++ K+ I ++S + + Q+ ++ +L K Sbjct: 119 AFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDSLLRTPKLLKDFIKNKDA 178 Query: 175 -VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +E + ++ R D D + + ++P + + + Sbjct: 179 NQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKE 238 Query: 234 DTEWYNIVSWT 244 D ++ Sbjct: 239 DKTLQAKINRA 249 >gi|332161361|ref|YP_004297938.1| cystine transporter subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665591|gb|ADZ42235.1| cystine transporter subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 266 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 79/248 (31%), Gaps = 15/248 (6%) Query: 2 YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + ++ + + + +L +K+RG L G+ F+ +G GF Sbjct: 7 RRRVVLGMMAVALATGLNVKSYAAGDLLDQVKERGTLIVGLEGTYPPFSFQGEDGKLTGF 66 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VDF AL+ + + P +L+SK+ID+ + F Sbjct: 67 EVDFANALAEHMGVKA---KITPTKWDGMLASLESKRIDVAINQVTI--SDDRKKKYDFS 121 Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G + K S L G + V G+ E L + K ++ Sbjct: 122 TPYTVSGIQVLTKKGNEGKFSKPEDLVGKKVGVGLGSNYEQWLRENLK----GVDIRTYD 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R R DA D L AL L + ++ A+ + + E Sbjct: 178 DDPTKYQDLRVGRTDAILVDR--LAALDLVKKTNDTLTVAGPAFARQESGVALRKNNPEL 235 Query: 238 YNIVSWTH 245 ++ Sbjct: 236 LAAINQAI 243 >gi|323697579|ref|ZP_08109491.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. ND132] gi|323457511|gb|EGB13376.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans ND132] Length = 274 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 48/227 (21%), Positives = 88/227 (38%), Gaps = 11/227 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + LK G++ + F + +W GFDVD ++ + K+ Sbjct: 22 AGPTYDRVMSTKTLKVGLSNQGIPFGFIDDKNEWVGFDVDMATEIAKRLGCKLEKVV--- 78 Query: 83 LNAKERFLALQSK--QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +N R +Q+ ++D++ N T R + F +FDGQ F+ K + V Sbjct: 79 VNNNTRISFVQTNPPKVDMVLSNM--THKRVRDEKIDFSITYFFDGQKFLAKKG-TVKDV 135 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV-FERVEEIDAAYRAHRCDAYTGDIS 199 L+ + GTT+ + Y K + ++ + A R+ R A T D + Sbjct: 136 KDLANMKVGSMQGTTSIVNATAYLKELGNPNPSVTGYDGEVAMFEALRSGRVQAITTDST 195 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 L P + ++ D IS P + Q D+ W + +++T Sbjct: 196 ILLGYAAKV--PGQFELVGDFISDEPYGIGLPQDDSAWRDTINFTLQ 240 >gi|306833969|ref|ZP_07467093.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus bovis ATCC 700338] gi|304423970|gb|EFM27112.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus bovis ATCC 700338] Length = 281 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 109/279 (39%), Gaps = 19/279 (6%) Query: 1 MYKDF--------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K + +L L T + + + I+ G LK G+ + F A Sbjct: 12 MKKKLGLAILASLSLILLTLFTGKTTFADSVSEQVKKIQDAGVLKVGVKQDVPNFGYYSA 71 Query: 53 -NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G ++G +VD + ++ + + + + A+ R L + QIDIL T R+ Sbjct: 72 ETGKYEGMEVDLAKKIAKKLGVK---VSFTAVTAQTREALLDNGQIDILIATYTITEERQ 128 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 S + Y+D GF+++K KG S++ L G +I V G+TT+ + +Y +AHN+ + Sbjct: 129 ASYAI--SNPYYYDEIGFLVNKSKGYDSIADLDGLTIGVAQGSTTKSAIEEYGEAHNLSF 186 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + E+ + A+R A++ D S L I+ + + A Sbjct: 187 NFVQLGSYPELAISLYANRISAFSVDKSILTGYVSKKT-----EIIDEGFNTQEYGIAAT 241 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + + + ++ L + + Sbjct: 242 KSNQSVIDYINDLLADWKADGSLQKLYDKYDLTPAKAND 280 >gi|271499666|ref|YP_003332691.1| family 3 extracellular solute-binding protein [Dickeya dadantii Ech586] gi|270343221|gb|ACZ75986.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech586] Length = 273 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 83/259 (32%), Gaps = 20/259 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L S + S L +K+ G ++ + F+ + N GFD Sbjct: 1 MKKLLTLMALALSTCLALSTAQAGSTLDRVKQTGVVRNVLFNDYPPFSYLNDNNQLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + + D+ + R L F Sbjct: 61 VDVANAVAQKLGAKLELATPGWETIVGGK---WQGRWDMCICSMTPNAERAKV--LDFAT 115 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE-- 177 Y I+HK + I S + LS + + G++ E L K F+ Sbjct: 116 PYYSTFAVLIVHKDEKNIHSAADLSNKKVGLGLGSSYENYLNKSLVIPGGKPIAFPFDHV 175 Query: 178 -----RVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 E R DA D K ++ + IL ++ P A Sbjct: 176 QAVPTDEEMAFRNLALGPGKRLDAVISDRI---TAKPRLEKLPQLRILQELY-AEPNWIA 231 Query: 230 IIQGDTEWYNIVSWTHYAM 248 + +GD EW ++ T A+ Sbjct: 232 VDKGDPEWSKTLADTITAL 250 >gi|257093638|ref|YP_003167279.1| family 3 extracellular solute-binding protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046162|gb|ACV35350.1| extracellular solute-binding protein family 3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 268 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 71/213 (33%), Gaps = 7/213 (3%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 + G++ GFD+D + + +++ P++ + L SK Sbjct: 42 IVVGLDDNFPPMGFRDEKNTLVGFDIDLAGEAGKRLGAE---VKFKPIDWNAKEAELNSK 98 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D+L T R+ + F + Q ++ K + + + L+G + VQ G++ Sbjct: 99 RVDVLWNGLTITEARKE--KILFTTPYLENRQIIVVTDKSPVKTKADLAGKVVGVQDGSS 156 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 + F A R DA D + T +P E+ Sbjct: 157 AIEAVEKDAATAKSLKELKKFGDNVTALMDLGAGRLDALVVDE--VVGRYYTTKKPGEYR 214 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 +L + + DTE + T M Sbjct: 215 VLDENFGTEDYGVGTRKDDTELMAKLQKTLDEM 247 >gi|239908611|ref|YP_002955353.1| bacterial extracellular solute-binding protein [Desulfovibrio magneticus RS-1] gi|239798478|dbj|BAH77467.1| bacterial extracellular solute-binding protein [Desulfovibrio magneticus RS-1] Length = 270 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 94/265 (35%), Gaps = 25/265 (9%) Query: 1 MYKDFFVSILCLIILFFTSFST---------NASILGDIKKRGFLKCGINTGLVGFAEVK 51 M + V L + L + S L I KRG L G+ F V Sbjct: 1 MIRFIRVVCLAFVALTMCCGTALAITPYDIYEGSALRQIVKRGKLVVGMELKFWPFEYVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G GFDVD + L+ + + ++ + AL S +ID++ TL R Sbjct: 61 EKGKPVGFDVDIAKTLAERLGVE---LEIKDMEWTGLIPALTSGKIDLIISGITGTLERA 117 Query: 112 ISLGLAFRPITYFDGQGFI--MHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAH 167 + + F + G + + K ++ + L G I V+ GTT ++ A F Sbjct: 118 KT--ITFSSPYFTTGLCILASVQKAPDLTDAAGLDKPGRVIAVKTGTTADIVAAKRFPKA 175 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 ++ A A R DA+ D ++ K P L + P Sbjct: 176 ----TINRYQDETACAADVAAGRADAFIYDQISIA--KHQKQHPETTKALLTPFTYEPFC 229 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAE 252 A+ +GD + + V A + A+ Sbjct: 230 IAMQKGDFDLWQYVEMYI-ASIKAD 253 >gi|330829209|ref|YP_004392161.1| amino acid ABC transporter amino acid-binding protein [Aeromonas veronii B565] gi|328804345|gb|AEB49544.1| Amino acid ABC transporter amino acid-binding protein [Aeromonas veronii B565] Length = 260 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 91/254 (35%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L + + A K+ ++ G+ F+ A+G+ KGFD Sbjct: 1 MMK-IRLTLSALFVASLLATPAMA------KEWKTVRFGVEGAYPPFSWTDASGEIKGFD 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + K + + + AL S++ D + T R + F Sbjct: 54 IDLANALCQQM---AVKCELVAQDWDGMIPALLSRKYDAIIAAMSITDER--RQKVDFTE 108 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F+ K ++ + ++G I VQ TT + L D F ++ + + Sbjct: 109 KYAHIPNRFVAAKGTELTLTPEGMAGKRIGVQRATTHDKYLTDNFGSN---VTIVRYGNA 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +E +A R A D SA+ L + + + ++ A+ + D Sbjct: 166 DEAYLDLKAGRVLALLADASAIEQGLLGKEGGDKFDYVGPALTDRQWFGDGMGIAVRKSD 225 Query: 235 TEWYNIVSWTHYAM 248 E + A+ Sbjct: 226 KELKGKLDEAIKAL 239 >gi|187919125|ref|YP_001888156.1| family 3 extracellular solute-binding protein [Burkholderia phytofirmans PsJN] gi|187717563|gb|ACD18786.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 251 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 87/255 (34%), Gaps = 23/255 (9%) Query: 1 MYKDFFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +S+ C+ + + + +A L + NG Sbjct: 1 MKLQRLLSLACVTVAVTFAGFSGAASAQTPD------VLNVATDATFPPMEYT-ENGART 53 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD AL+ A+ +Q+ ++ K L + + D T R + Sbjct: 54 GFDVDLMNALAKAMGKK---VQWTDIDFKGLIPGLIAHRFDAAISGIYITDERAKV--VD 108 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y G ++ I SV +L+G + VQ GT + L D F N + E Sbjct: 109 FTDSYYAGGLVVLVKSNSPIKSVEELNGKKVSVQVGTKSVNFLRDNFPQINR----VEVE 164 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + +E+ R DA A Y L T +L ++ A+ + + + Sbjct: 165 KNQEMFDLVGIGRADAAVTGKPAAYQLVKTRGG---FRVLDKPLTTEAYGIAVRKDEPQL 221 Query: 238 YNIVSWTHYAMVTAE 252 + A + A+ Sbjct: 222 KAAFNTAL-AKIKAD 235 >gi|94994528|ref|YP_602626.1| Histidine-binding protein [Streptococcus pyogenes MGAS10750] gi|94548036|gb|ABF38082.1| Histidine-binding protein [Streptococcus pyogenes MGAS10750] Length = 278 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 79/251 (31%), Gaps = 13/251 (5%) Query: 2 YKDFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K + F + + G +K+ + G + V +G Sbjct: 4 KKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKC 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 KGFD+D + + K+ + +N + L + +ID++ T R + Sbjct: 64 KGFDIDLAKEVFHQYG---LKVNFQAINWDMKEAELNNGKIDVIWNGYSITKER--QNKV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI-- 174 AF + Q ++ K+ I ++S + + Q+ ++ +L K Sbjct: 119 AFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDSLLRTPKLLKDFIKNKDA 178 Query: 175 -VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +E + ++ R D D + + ++P + + + Sbjct: 179 NQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKE 238 Query: 234 DTEWYNIVSWT 244 D ++ Sbjct: 239 DKTLQAKINRA 249 >gi|311895159|dbj|BAJ27567.1| putative glutamate ABC transporter substrate-binding protein [Kitasatospora setae KM-6054] Length = 303 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 82/228 (35%), Gaps = 10/228 (4%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKI 78 T + L + RG L G + G++ GFD++ R + + + P +I Sbjct: 50 AVTGSPTLDAARARGHLVVGAKEDQPYLGQKNPATGEYSGFDIEIARMVGADLGFAPERI 109 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGI 137 ++ + + R ALQ+ Q+D R+ +G F + GQ ++ K I Sbjct: 110 EFRTIASANRETALQNGQVDYYVGTYTINDNRKKLVG--FAGPYFVAGQSLLVRKNETKI 167 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 L+G +C AG+T + + + I ++ + DA T D Sbjct: 168 DGPQDLAGRKVCSAAGSTPYQRIQ----KNYPQAKLIGYDTYSACVDNLITGQVDAVTTD 223 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + L P E I S+ P + +GDT + Sbjct: 224 NAILQGYAAKV--PDELRIAGQPFSEEPYGIGVPKGDTALRLALDDAL 269 >gi|152981681|ref|YP_001351726.1| ABC transporter substrate binding protein [Janthinobacterium sp. Marseille] gi|151281758|gb|ABR90168.1| ABC transporter substrate binding protein [Janthinobacterium sp. Marseille] Length = 259 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 91/245 (37%), Gaps = 11/245 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L L T+ A L DI+K+G L+ + F V + +G D Sbjct: 1 MKLSTILIGLMAGALLLTNV-ARADALDDIQKKGVLRVAVPQDFPPFGSVTTDMTPQGLD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + ++ +P+ + R LQ+K++D++ + RE + F Sbjct: 60 IDVATLIAKKLGVK---VELIPVTSANRIPYLQTKKVDLVISSMGKNPEREKV--IDFSA 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G + +++ + L+G +I V G+ +L L+ +E Sbjct: 115 AYAPFFNGVFGPADQKVAAPADLAGKTIGVTRGSVEDLELSKIAPE---SATIKRYEDNN 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +++ +++ A+ P + +I SP + + +G+ + Sbjct: 172 GTISSFLSNQVQLVATGNVIAAAIIA--KNPPKKPETKFLIKNSPCSIGLNKGEEKLLEK 229 Query: 241 VSWTH 245 V+ Sbjct: 230 VNAII 234 >gi|21910442|ref|NP_664710.1| putative amino acid ABC transporter periplasmic amino acid-binding protein [Streptococcus pyogenes MGAS315] gi|28896017|ref|NP_802367.1| amino acid ABC transporter (periplasmic amino acid-binding protein) [Streptococcus pyogenes SSI-1] gi|94988716|ref|YP_596817.1| histidine-binding protein [Streptococcus pyogenes MGAS9429] gi|94992539|ref|YP_600638.1| histidine-binding protein [Streptococcus pyogenes MGAS2096] gi|21904640|gb|AAM79513.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Streptococcus pyogenes MGAS315] gi|28811267|dbj|BAC64200.1| putative amino acid ABC transporter (periplasmic amino acid-binding protein) [Streptococcus pyogenes SSI-1] gi|94542224|gb|ABF32273.1| histidine-binding protein [Streptococcus pyogenes MGAS9429] gi|94546047|gb|ABF36094.1| Histidine-binding protein [Streptococcus pyogenes MGAS2096] Length = 278 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 79/251 (31%), Gaps = 13/251 (5%) Query: 2 YKDFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K + F + + G +K+ + G + V +G Sbjct: 4 KKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKC 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 KGFD+D + + K+ + +N + L + +ID++ T R + Sbjct: 64 KGFDIDLAKEVFHQYG---LKVNFQAINWDMKEAELNNGKIDVIWNGYSITKER--QDKV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI-- 174 AF + Q ++ K+ I ++S + + Q+ ++ +L K Sbjct: 119 AFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDSLLRTPKLLKDFIKNKDA 178 Query: 175 -VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +E + ++ R D D + + ++P + + + Sbjct: 179 NQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKE 238 Query: 234 DTEWYNIVSWT 244 D ++ Sbjct: 239 DKTLQAKINRA 249 >gi|307130005|ref|YP_003882021.1| amino acid ABC transporter periplasmic amino acid-binding protein [Dickeya dadantii 3937] gi|306527534|gb|ADM97464.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Dickeya dadantii 3937] Length = 273 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 76/259 (29%), Gaps = 20/259 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L F S + S L +K+ G ++ + F+ + GFD Sbjct: 1 MKKLLALMALGLSACFMLSAAQAGSTLDRVKQTGVVRNVLFNDYPPFSYLDDKNQLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + + D+ + R L F Sbjct: 61 VDIANAVAQKLGARLELATPGWETIVGGK---WQGRWDMCICSMTPNAERAKV--LDFAT 115 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE-- 177 Y I+HK + I S + LS + + G++ E L K F+ Sbjct: 116 PYYSTFAVLIVHKDEKNIQSAADLSNKKVGLGLGSSYENYLNKSLAIPGGKPIAFPFDHV 175 Query: 178 -----RVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 E R DA D + L P A Sbjct: 176 QAVPTDEEMAFRNLALGPGKRLDAVISDRITAKPRIEKLPQLRILQEL----YAEPNWIA 231 Query: 230 IIQGDTEWYNIVSWTHYAM 248 + +GD EW ++ A+ Sbjct: 232 VDKGDPEWSKTLADAITAL 250 >gi|229520323|ref|ZP_04409749.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae TM 11079-80] gi|229342689|gb|EEO07681.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae TM 11079-80] Length = 260 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 86/254 (33%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + + K+ ++ GI F+ +A+G KGFD Sbjct: 3 MKKWLVAAALIATTISGVTQA---------KEWKTVRFGIEGAYPPFSWTEADGSLKGFD 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + + +P + +L +++ D + T R+ + F Sbjct: 54 VDMANALCAEM---QVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 108 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 FI K + L G I VQ TT + + D + + + Sbjct: 109 KYAQIPNKFIAKKGADLAFTKEGLKGVKIGVQRATTHDKYITDNY---GDTVDIVRYGSF 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E R A GD SAL L + + ++ + A+ + D Sbjct: 166 DEAYLDLANGRIAAVLGDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQD 225 Query: 235 TEWYNIVSWTHYAM 248 E + A+ Sbjct: 226 KELTEKLDAAITAL 239 >gi|107022626|ref|YP_620953.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116689575|ref|YP_835198.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|170732879|ref|YP_001764826.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|206559974|ref|YP_002230738.1| periplasmic cystine-binding protein [Burkholderia cenocepacia J2315] gi|254245535|ref|ZP_04938856.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia cenocepacia PC184] gi|105892815|gb|ABF75980.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116647664|gb|ABK08305.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] gi|124870311|gb|EAY62027.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia cenocepacia PC184] gi|169816121|gb|ACA90704.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] gi|198036015|emb|CAR51908.1| periplasmic cystine-binding protein [Burkholderia cenocepacia J2315] Length = 264 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 87/257 (33%), Gaps = 18/257 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +L ++ + + A +L +K+RG L+ G+ F G+ Sbjct: 1 MKFSLLKKLLVAGVIGTSFAAATAHAADLLDQVKQRGTLRVGLEGTFPPFNSKSPQGELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + ++ LQ+ + D+++ T R+ + L Sbjct: 61 GFDVDIAKAVAAKLGVKAE---FVTTEWSGIIAGLQAGKFDVIANQVGITDKRKET--LD 115 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F P + I K S+ L G + V GT Sbjct: 116 FSPAYTYSSAQLIQRKDDTRQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKT 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E A R DA D L L + P ++ S +P +G+ Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNP 228 Query: 236 EWYNIVSWTHYAMVTAE 252 ++ + A + A+ Sbjct: 229 KFQKAIDDAM-AQLEAD 244 >gi|327484415|gb|AEA78822.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae LMA3894-4] Length = 258 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 85/254 (33%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + + K+ ++ GI F+ +A+G KGFD Sbjct: 1 MKKWLVATALIATTISGVTQA---------KEWKTVRFGIEGAYPPFSWTEADGSLKGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + + +P + +L +++ D + T R+ + F Sbjct: 52 VDMANALCAEM---QVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 106 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 FI K + L G I VQ TT + + D + + + Sbjct: 107 KYAQIPNKFIAKKGADLAFTKEGLKGVKIGVQRATTHDKYITDNY---GDTVDIVRYGSF 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E R A GD SAL + + ++ + A+ + D Sbjct: 164 DEAYLDLANGRIAAVLGDASALEEGMFNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQD 223 Query: 235 TEWYNIVSWTHYAM 248 E + A+ Sbjct: 224 KELTEKLDAAITAL 237 >gi|303230444|ref|ZP_07317205.1| bacterial extracellular solute-binding protein, family 3 [Veillonella atypica ACS-049-V-Sch6] gi|302514983|gb|EFL56964.1| bacterial extracellular solute-binding protein, family 3 [Veillonella atypica ACS-049-V-Sch6] Length = 270 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 82/246 (33%), Gaps = 10/246 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K V + + ++ F S + + D + + G++ G+ G D+ Sbjct: 4 KKIMAVGLAAVSMMAFVSGCGSDTKNADTQLPKKIVIGLDDSFPPMGFKDDKGEIVGLDI 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + + D +++ ++ + L+SK+ID+L + RE + F Sbjct: 64 DLAKEAAKRAGMD---VEFKAIDWSSKEAELKSKKIDVLWNGLTVSPEREK--NILFSDT 118 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 D Q ++ I S L+G + VQ +T E L + + + Sbjct: 119 YMKDKQYIVVRNDDNAIKGKSDLAGKVVGVQQASTGESALQND-PSGKTVKEIKSYADFV 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYN 239 R DA D A L P ++ I+ A + DT + Sbjct: 178 SAFMDLGIGRVDAVIADGVI--ARYLMTKEPGKYKIVEGTDYGVDNFAVGFRKDDTALRD 235 Query: 240 IVSWTH 245 ++ Sbjct: 236 KINGIL 241 >gi|163856809|ref|YP_001631107.1| periplasmic glutamine-binding protein [Bordetella petrii DSM 12804] gi|163260537|emb|CAP42839.1| periplasmic glutamine-binding protein [Bordetella petrii] Length = 247 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 89/248 (35%), Gaps = 24/248 (9%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + ++L L + + + + L+ + V NG G Sbjct: 1 MKTRRQLLTTVLALGLAWGAAPAHAQET---------LRVVTDATFPPMEFV-KNGQRTG 50 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD++ AL A+ I+++ ++ K ALQ+ + D+ T R+ + F Sbjct: 51 FDIELIEALGQAMGKK---IEWIDIDFKGLIPALQAGRADMAVSAIYITDARK--QVVDF 105 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G + K I S+ L G + VQ GT + L +++ + + E+ Sbjct: 106 TDPYYAGGLVVLTRKDGPIKSLKDLDGRKVSVQVGTKSVNYLKEHYP----QVQRVEVEK 161 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E+ + R DA A KL E +L + I+ A+ + E Sbjct: 162 NQEMFNLVQVGRTDAAVTGKP---AAKLFAQNTPELTVLDEQITTEQYGIAVPKSKPELT 218 Query: 239 NIVSWTHY 246 ++ Sbjct: 219 AALNAALK 226 >gi|154486962|ref|ZP_02028369.1| hypothetical protein BIFADO_00799 [Bifidobacterium adolescentis L2-32] gi|154084825|gb|EDN83870.1| hypothetical protein BIFADO_00799 [Bifidobacterium adolescentis L2-32] Length = 301 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 11/228 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 T+ A L +IKK G LK + + F + +G G+D+ F L+ + Sbjct: 46 GATTSKVTARSLDEIKKSGVLKVAVFSDKAPFGYIDKDGKNAGYDIVFAERLAKDLGVK- 104 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 ++Y ++ R L S ++DI N T R+ + F G + + Sbjct: 105 --VKYTSVDPAARVDVLTSNKVDITLANFTVTDERKE--KVDFAKPYMKVALGVVSPENA 160 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ VSQL G ++ + GTT E F+ + +++ + A R DA++ Sbjct: 161 EITDVSQLKGKTLIIAKGTTAESY----FEKNEPDVKLQKYDQYADAYNALLDGRGDAFS 216 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 D + + A T V + + + +APA+ +G+ E N ++ Sbjct: 217 TDNTEVLAWAKT--NKGFKVGITKLGDEDTIAPAVQKGNKELLNWIND 262 >gi|322833174|ref|YP_004213201.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] gi|321168375|gb|ADW74074.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] Length = 266 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 83/248 (33%), Gaps = 15/248 (6%) Query: 2 YKDFFVSILC--LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + + L ++ + +L +K RG L G+ F+ +G GF Sbjct: 7 RRRLLLGAVAVTLTAGMVSNTFADEGLLKKVKDRGTLIVGLEGTYPPFSFQGEDGKLTGF 66 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +V+F AL+ + + P +L+SK+ID++ + RE F Sbjct: 67 EVEFADALAQHMGVKA---KLQPTKWDGMLASLESKRIDVVINQVTISPEREK--KYDFS 121 Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G + K + I+ L G + V G+ E L + + ++ Sbjct: 122 TPYTVSGIQALTKKGQEGTITKPEDLKGKKVGVGLGSNYEQWL----RENVQGVDIRTYD 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R R +A D L AL L + S+ AI + + E Sbjct: 178 DDPTKYQDLRVGRINAILVDR--LAALDLVKKTGDTLAVAGAPFSRLESGVAIRKDNPEL 235 Query: 238 YNIVSWTH 245 ++ Sbjct: 236 LAAINKAI 243 >gi|237797984|ref|ZP_04586445.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020835|gb|EGI00892.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 261 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 90/261 (34%), Gaps = 11/261 (4%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + +A+ L D+ RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + F Sbjct: 61 DIDTAQLLADRL---QVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + V+ L G +I V G ++ L+ FE Sbjct: 116 RAYAPFYLAVFGPPDSPVKDVADLKGKTISVTRGAIEDIELSAVAPE---GTTIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A ++ P L + SP+ + +G E Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLG 230 Query: 240 IVSWTHYAMVTAEELGITQKN 260 V+ A L + Sbjct: 231 KVNEILNAAKADGALEKASET 251 >gi|157369177|ref|YP_001477166.1| extracellular solute-binding protein [Serratia proteamaculans 568] gi|157320941|gb|ABV40038.1| extracellular solute-binding protein family 3 [Serratia proteamaculans 568] Length = 263 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 95/244 (38%), Gaps = 10/244 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +K V L ++L + S A L +I++RG L+ + F V + +G+D+ Sbjct: 3 FKKIGVVALGAVLLMAQAASAMADQLQEIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L+ + K+Q +P+ + R LQ+ ++D++ + RE +AF Sbjct: 63 DMAQYLADKM---KLKLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREK--AIAFSRT 117 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G K+ ++ +QL+G +I V G ++ L+D +E Sbjct: 118 YAPFFLGVFGPKESVLADATQLNGKTIGVTRGAVEDMVLSDTAPK---GTQIKRYEDNNT 174 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +AY + + L + PS+ + ++ SP + G+ V Sbjct: 175 TLSAYLSGQVQYIATGN--LVVSAIARQNPSKAPVAKFMLKDSPCYVGLRLGEPALQAKV 232 Query: 242 SWTH 245 Sbjct: 233 DQLI 236 >gi|291460387|ref|ZP_06599777.1| CjaA protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291416954|gb|EFE90673.1| CjaA protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 298 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 46/229 (20%), Positives = 95/229 (41%), Gaps = 11/229 (4%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 S + + +I+ G ++ G+ T F + + G+ +G+DV + R ++ + Sbjct: 44 GSASFRTVEEIRNSGVIRIGVFTDKAPFGYIDSKGENQGYDVFYARRIAEDLGVKAE--- 100 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + L+ R + + +IDI N T R + F G + + K I S Sbjct: 101 FTSLDPASRVEYVSTGKIDITLANFTVTKERAE--QVDFALPYMKVALGVVSPEDKEIKS 158 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V +L G ++ + GTT E F+ ++ + ++ + A R DA++ D + Sbjct: 159 VEELKGKTLIIAKGTTAETY----FEKNHPEVKLQKYDAYADAYNALLDGRGDAFSTDNT 214 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + A P V + + +A A+ +G+TE + ++ A+ Sbjct: 215 EVIAWA--KTNPGYVVGIETLGDYDTIAAAVAKGNTELLDFLNEEIRAL 261 >gi|56808073|ref|ZP_00365868.1| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Streptococcus pyogenes M49 591] gi|71903619|ref|YP_280422.1| histidine-binding protein [Streptococcus pyogenes MGAS6180] gi|209559534|ref|YP_002286006.1| Putative amino acid ABC transporter, periplasmic amino acid-binding protein [Streptococcus pyogenes NZ131] gi|71802714|gb|AAX72067.1| histidine-binding protein [Streptococcus pyogenes MGAS6180] gi|209540735|gb|ACI61311.1| Putative amino acid ABC transporter, periplasmic amino acid-binding protein [Streptococcus pyogenes NZ131] Length = 278 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 79/251 (31%), Gaps = 13/251 (5%) Query: 2 YKDFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K + F + + G +K+ + G + V +G Sbjct: 4 KKRTVAILAIASSFFLVACQATKGLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKC 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 KGFD+D + + K+ + +N + L + +ID++ T R + Sbjct: 64 KGFDIDLAKEVFHQYG---LKVNFQAINWDMKEAELNNGKIDVIWNGYSITKER--QEKV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI-- 174 AF + Q ++ K+ I ++S + + Q+ ++ +L K Sbjct: 119 AFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDSLLRTPKLLKDFIKNKDA 178 Query: 175 -VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +E + ++ R D D + + ++P + + + Sbjct: 179 NQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKE 238 Query: 234 DTEWYNIVSWT 244 D ++ Sbjct: 239 DKTLQAKINRA 249 >gi|256851553|ref|ZP_05556942.1| amino acid ABC transporter periplasmic protein [Lactobacillus jensenii 27-2-CHN] gi|260660976|ref|ZP_05861891.1| amino acid ABC transporter periplasmic protein [Lactobacillus jensenii 115-3-CHN] gi|282932201|ref|ZP_06337649.1| glutamine-binding protein [Lactobacillus jensenii 208-1] gi|297206368|ref|ZP_06923763.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus jensenii JV-V16] gi|256616615|gb|EEU21803.1| amino acid ABC transporter periplasmic protein [Lactobacillus jensenii 27-2-CHN] gi|260548698|gb|EEX24673.1| amino acid ABC transporter periplasmic protein [Lactobacillus jensenii 115-3-CHN] gi|281303688|gb|EFA95842.1| glutamine-binding protein [Lactobacillus jensenii 208-1] gi|297149494|gb|EFH29792.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus jensenii JV-V16] Length = 275 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 96/268 (35%), Gaps = 24/268 (8%) Query: 1 MYK---DFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVK-AN 53 M K F S L +L ++ ++ IK + G+ F + Sbjct: 1 MKKFCKWIFASFSLLFLLTLSACQKSSKSLDTYDKIKASQTITWGVKADTRLFGIMNIKT 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 +GF++D + LS + K+ + AK + L++ +D L T R+ Sbjct: 61 SQLEGFEIDLAKDLSKKMLGKNVKVNLVQTTAKTKIPLLRNGSVDALLSTMTITEERKKI 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKY 171 + F + GQ ++ K + +V L G ++ GTT + + N Sbjct: 121 --VDFSTPYFNAGQAILVPKNSKLKNVYDLKKRGITVLAVKGTTAVANIKKFAPKAN--- 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ + +A +A + A T D L + ++ P I+ + P A+ Sbjct: 176 -VSEYDDYGQAFSALKAGQGQALTTDNGILAGIA--DENPG-FKIVGGTFTSEPYGIAVR 231 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQK 259 +GDT+ N + EEL Sbjct: 232 KGDTKLRNKLDQAL------EELKADGT 253 >gi|255026869|ref|ZP_05298855.1| amino acid ABC transporter (binding protein) [Listeria monocytogenes FSL J2-003] Length = 255 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 34/241 (14%), Positives = 82/241 (34%), Gaps = 8/241 (3%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + ++ L + +S + IKK + G++ V + + GFD+D +A Sbjct: 1 MLMVMLALGACSSSESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLVGFDIDLAKA 60 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + + ++ P++ + L++ ID++ T R+ + F + Sbjct: 61 VFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA--FSQPYMKNE 115 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEID 183 Q + K I+ S + ++ Q G ++ +A + P +++ + Sbjct: 116 QVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPELYDTFDTAF 175 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 R D D ++ I+ + A + + D E ++ Sbjct: 176 IDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATDFAVGMRKSDKELQTKINE 235 Query: 244 T 244 Sbjct: 236 A 236 >gi|238927182|ref|ZP_04658942.1| extracellular solute-binding protein [Selenomonas flueggei ATCC 43531] gi|304437127|ref|ZP_07397089.1| ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|238884964|gb|EEQ48602.1| extracellular solute-binding protein [Selenomonas flueggei ATCC 43531] gi|304369886|gb|EFM23549.1| ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 256 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 79/256 (30%), Gaps = 16/256 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFD 60 K V L+ L K+ L+ G + F ++GFD Sbjct: 4 KKLALVLTGALVSLSLLGCGAGG---DQAKQASKLRVGASIDFAPFEFQDEGQKDYQGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D RA++ + + + ALQ+K ID++ R+ +AF Sbjct: 61 MDLIRAVAKEMGSEAE---IQNIGFDGLIPALQAKNIDVIISGMTINDERKE--KVAFSD 115 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ + I S S L G + Q GTT + Sbjct: 116 PYYQSGLTMVVRSDEENIKSFSDLKGHKVAAQIGTTGAKMAKEM-----EGVTVSELNTP 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + +A DA D + + + L D +S A+ + +TE Sbjct: 171 ADCFMELKAGGVDAVINDRPVN-DYYINQSQATGVKTLADRLSAEDYGIAMAKDNTELQQ 229 Query: 240 IVSWTHYAMVTAEELG 255 ++ + E Sbjct: 230 KINAALKKLHDNGEYD 245 >gi|154502489|ref|ZP_02039549.1| hypothetical protein RUMGNA_00302 [Ruminococcus gnavus ATCC 29149] gi|153796885|gb|EDN79305.1| hypothetical protein RUMGNA_00302 [Ruminococcus gnavus ATCC 29149] Length = 276 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 22/256 (8%) Query: 1 MYKDFFVSILCLIILFFT---------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M K + + + + +A ++ + G + + + Sbjct: 1 MKKKLALILAGTAMAAMVLAGCGEKNNASGEDAKTAESVEDKKTFTVGFDAEYPPYGYMD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 NG++ GFD++ A+ + K PLN + + L S ID + + Sbjct: 61 ENGEYTGFDLELAEAVCKLEGWELVK---KPLNWDSKDMELNSGSIDCIWNGFTMNGRED 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD-----YFKA 166 F + Q ++ +K GI ++ L+G ++ VQA + L K Sbjct: 118 ---DYTFSTPYVDNSQVIVVAEKSGIDTLEDLAGKTVGVQAASAALDLLQSEEEGGQKKL 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + F +A DA D A R + IL + ++ Sbjct: 175 ADTFGALNEFADYNTAFTELQAGALDALAID--VGVANYQIKSRGEGYKILDETLNTEQY 232 Query: 227 APAIIQGDTEWYNIVS 242 A +G+ E ++V+ Sbjct: 233 AIGFKKGNQELCDVVN 248 >gi|331702185|ref|YP_004399144.1| ABC transporter periplasmic subunit [Lactobacillus buchneri NRRL B-30929] gi|329129528|gb|AEB74081.1| ABC-type transporter, periplasmic subunit family 3 [Lactobacillus buchneri NRRL B-30929] Length = 276 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 90/236 (38%), Gaps = 12/236 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++L D K+ + G+ F + + KGF++D +A++ I K +++ Sbjct: 30 QKNVLKDDKQTKTITWGVKADTKLFGLMDVRDNQIKGFEIDLAKAMTKQILGKDGKARFI 89 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + ++ R L++ ID + T R + F + GQ ++ I +V Sbjct: 90 QVTSQTRMPLLRNGNIDAIMATMTITPERAK--QVDFSRSYFDAGQAILVKNGSPIKNVK 147 Query: 142 QLSGASICV--QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+ V G+ + + + + + A ++ + DA T D Sbjct: 148 DLNHKGAIVLGVVGSNSVQNIKKFAPKA----RVLQLSDYSQALTALKSGQGDALTTDNG 203 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 LY ++ + P + ++ +K P A+ +G + + ++ + + + Sbjct: 204 ILYG--MSIENPG-YSVVGGTFTKEPYGIAVDKGQGQMRDAMNNALTKVENSGQYN 256 >gi|152994486|ref|YP_001339321.1| extracellular solute-binding protein [Marinomonas sp. MWYL1] gi|150835410|gb|ABR69386.1| extracellular solute-binding protein family 3 [Marinomonas sp. MWYL1] Length = 263 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 94/258 (36%), Gaps = 15/258 (5%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + +I F++ S +A +L DIK R ++ + F V + +G Sbjct: 1 MKRLTKLLGKTLIIAAGFSALSASADVLQDIKDRNLIRIAVPQDFPPFGSVGTDLKPQGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD ++ + I+ +P+ + R LQ++++D++ + RE + F Sbjct: 61 DVDMANYIAKEMGVK---IEIIPVTSANRIPYLQTQKVDLVISSLGKNPEREK--AIDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G K ++ + +L+ ++ V G+ +L L + FE Sbjct: 116 TPYAPFFLGVFGSKDVAVTKIGELADKTVGVTRGSVEDLELEKNAPK---SVNVRRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALY--ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 AY + + + A + P +L D P + +G+ Sbjct: 173 NTTLTAYLSGQVNLIATGNLVAAEIAKRQPQRAPENKFMLKDS----PCYIGMAKGEVAL 228 Query: 238 YNIVSWTHYAMVTAEELG 255 V+ + + + EL Sbjct: 229 QAKVNELIKSALASGELN 246 >gi|89072733|ref|ZP_01159298.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium sp. SKA34] gi|89051553|gb|EAR57007.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium sp. SKA34] Length = 258 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 88/261 (33%), Gaps = 23/261 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + K+ ++ GI F+ + NG+ KGFD Sbjct: 1 MKKWILAATLISAMSASVVQA---------KEWKEVRFGIEGAYPPFSWTEPNGELKGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + K + + + +L +++ D + T R+ + F Sbjct: 52 VDMANALCTQM---QVKCKIVSQDWDGIIPSLLARKYDAIIAAMSITEERKK--KIDFTG 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F+ K + + L G I VQ TT + L D F + + Sbjct: 107 KYALIPNKFVAKKGTELDFTKEGLKGVKIGVQRATTHDKYLTDNF---GESVEIVRYGSF 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E +A R + GD SAL L D + ++ A+ + D Sbjct: 164 DEAYLDLKAGRIVSVLGDASALEEGLLNKDGGEGFEFIGPSLTDPKWFGEGFGIAVRKQD 223 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + + A+ + + Sbjct: 224 KDLTKKLDEAILALRESGQYK 244 >gi|255745377|ref|ZP_05419326.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholera CIRS 101] gi|262153520|ref|ZP_06028649.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae INDRE 91/1] gi|262167420|ref|ZP_06035127.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae RC27] gi|262191304|ref|ZP_06049497.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae CT 5369-93] gi|255737207|gb|EET92603.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholera CIRS 101] gi|262024117|gb|EEY42811.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae RC27] gi|262030647|gb|EEY49282.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae INDRE 91/1] gi|262032800|gb|EEY51345.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae CT 5369-93] Length = 258 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 86/254 (33%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + + K+ ++ GI F+ +A+G KGFD Sbjct: 1 MKKWLVATALIATTISGVTQA---------KEWKTVRFGIEGAYPPFSWTEADGSLKGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + + +P + +L +++ D + T R+ + F Sbjct: 52 VDMANALCAEM---QVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 106 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 FI K + L G I VQ TT + + D + + + Sbjct: 107 KYAQIPNKFIAKKGADLAFTKEGLKGVKIGVQRATTHDKYITDNY---GDTVDIVRYGSF 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E R A GD SAL L + + ++ + A+ + D Sbjct: 164 DEAYLDLANGRIAAVLGDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQD 223 Query: 235 TEWYNIVSWTHYAM 248 E + A+ Sbjct: 224 KELTEKLDAAITAL 237 >gi|119025524|ref|YP_909369.1| solute-binding protein for glutamate_aspartate ABC transporter system [Bifidobacterium adolescentis ATCC 15703] gi|118765108|dbj|BAF39287.1| probable solute-binding protein for glutamate_aspartate ABC transporter system [Bifidobacterium adolescentis ATCC 15703] Length = 301 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 93/228 (40%), Gaps = 11/228 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 T+ A L +IKK G LK + + F + +G G+D+ F L+ + Sbjct: 46 GVTTSKVTARSLDEIKKSGVLKVAVFSDKAPFGYIDKDGKNAGYDIVFAERLAKDLGVK- 104 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 ++Y ++ R L S ++DI N T R+ + F G + + Sbjct: 105 --VKYTSVDPAARVDVLTSNKVDITLANFTVTDERKE--KVDFAKPYMKVALGVVSPENA 160 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ VSQL G ++ + GTT E F+ + +++ + A R DA++ Sbjct: 161 EITDVSQLKGKTLIIAKGTTAESY----FEKNEPDVKLQKYDQYADAYNALLDGRGDAFS 216 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 D + + A V + + + +APA+ +G+ E N ++ Sbjct: 217 TDNTEVLAWA--KTNKGFKVGITKLGDEDTIAPAVQKGNKELLNWIND 262 >gi|227329360|ref|ZP_03833384.1| putative amino acid ABC transporter, substrate binding protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 253 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 88/236 (37%), Gaps = 10/236 (4%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + +L + S A L DI+KRG L+ + F V + +G+D+D R L+ Sbjct: 1 MGAAMLLVQAGSAMADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDIARYLAK 60 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + K+Q +P+ + R LQ+ ++D++ + RE + F G Sbjct: 61 EM---KLKLQLVPVTSANRVPYLQTNKVDLVISSLGKNAEREKV--IDFSRAYAPFFLGV 115 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 K ++S L G SI V G ++ L D +E +AY + Sbjct: 116 FGPKDSTLTSSDALEGKSIGVTRGAVEDMVLTDIAPKA---AQIKRYEDNNTTLSAYLSG 172 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + + A+ P++ + ++ SP + + + V Sbjct: 173 QVEYVATGNLVVAAIAEQ--NPTKAPVAKFMLKDSPCYIGLKKDEPALKAKVDALI 226 >gi|325062524|gb|ADY66214.1| amino acid ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 261 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 97/284 (34%), Gaps = 25/284 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 ++ ++ + F S A L DI RG L+ + F V A+ +G+D+ Sbjct: 3 FRRTLIAAAAMAAAFGLSAPAKADALADITARGTLRVAVPQDFPPFGSVAADMTPQGYDI 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + ++ + ++ +P+ + R LQ+ ++D++ + RE + F Sbjct: 63 DVAKMIADKLGVK---VELVPVTSANRVPYLQTNKVDLVISSLGKNPDREKV--IDFSDA 117 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G IS L G +I V G +L L + +E Sbjct: 118 YAPFFNGVFGPADVAISKAEDLKGKTIAVTRGAVEDLELTKVAPS---DATIKRYEDNNG 174 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +A+ + + + A+ P + L +I SP + + + V Sbjct: 175 TISAFLSGQVEVVATGNVVAAAILA--KNPPKRPELKFLIKNSPCYIGLNKNEPALLEKV 232 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285 + T A + + N ++LG D ++ Sbjct: 233 NATVAA---------------AKADGSLNAIATKWLGQDLPKDL 261 >gi|307320837|ref|ZP_07600247.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] gi|306893547|gb|EFN24323.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] Length = 280 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 97/259 (37%), Gaps = 7/259 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M F V+ + + + +S L ++ RG L G + + A + Sbjct: 1 MISKFTVAASFVAAVLAAMPAQAQQASSKLDEVLSRGHLILGTGSTNAPWHFKSAEDKLQ 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD R ++ A+F DP KI+++ ++ R + + ++DI + T R + +A Sbjct: 61 GFDVDMGRIIAKALFGDPEKIEFVNQSSDARIPNITTGKVDITCQFMTVTGER--AQQIA 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y +G ++ + L A V + D A + +E Sbjct: 119 FTIPYYREGVALMLKADGKYADYDALKAAGSSVTISVLQNVYAEDMVHAALPEATVDQYE 178 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 V+ I A + R DA D S+L + + A + +GD +W Sbjct: 179 SVDLIYQALESGRADAAATDQSSLAWYMTQ--NSGRYKDAGYGWNPQTYACGVRRGDQDW 236 Query: 238 YNIVSWTHYAMVTAEELGI 256 N V+ + +T E Sbjct: 237 LNFVNTALHQAMTGVEFDF 255 >gi|290473962|ref|YP_003466836.1| arginine ABC transporter periplasmic binding protein [Xenorhabdus bovienii SS-2004] gi|289173269|emb|CBJ80044.1| arginine transport protein (ABC superfamily, peri_bind) [Xenorhabdus bovienii SS-2004] Length = 247 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 84/249 (33%), Gaps = 25/249 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++L + L ++ + L+ F + AN +GFD Sbjct: 1 MKKLLFAALLTAMTLSTSATAAEKET---------LRFATEATYPPFEFIDANNKIQGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + I ++ + +L+ ++ D L D T + + F Sbjct: 52 VDLANAICAKI---NTECTFTNQAFDSLIPSLKFRRFDALMAGIDITP--DRRKQVDFTH 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K K S L + +Q GTT + L + K + ++ + Sbjct: 107 TYYDNSAVFIAIKGKFTHSA-DLKSKQVGIQNGTTHQKYLMEQHKE----IKTVPYDSYQ 161 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R DA GD + + + K L A+ +G+T Sbjct: 162 NAILDLKNGRIDAVFGDTAVANEWL--KKNKELGSVGDKVTDKDYFGIGLGIAVRKGNTA 219 Query: 237 WYNIVSWTH 245 + ++ Sbjct: 220 LLDKLNKAL 228 >gi|116628193|ref|YP_820812.1| amino acid ABC transporter periplasmic protein [Streptococcus thermophilus LMD-9] gi|116101470|gb|ABJ66616.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus thermophilus LMD-9] Length = 276 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 84/254 (33%), Gaps = 18/254 (7%) Query: 1 MY--KDFFVSILCLIIL-FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANG 54 M K + + + L + S++ + L +K +G L +N F Sbjct: 1 MKPWKKLLLGLAGIFALTSLAACSSSTNTLDKVKNKGTLTVALNPHFAPFEFKTIQDGKD 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D++ +A+ + +++ ++ ++QS + DI T R+ Sbjct: 61 TIAGADIEIAKAIGDELGVK---VKFSEMSFDNVLASVQSGKADIAISGISATKERQKI- 116 Query: 115 GLAFRPITYFDGQGFIMHKK---KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F Y ++ K K +S S SI VQ G+ E KA+ Sbjct: 117 -FDFSDTYYDSETVLLVKKDATEKTYKQISDFSKKSIAVQKGSIQENI----AKANLSDA 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + + E ++ + + + + N + I S A A+ Sbjct: 172 NVVSLAQPGEAINELKSGQVEGVVLEKAIAKGYVDQNSDLTMSDIALKSDSNDAYAVAMP 231 Query: 232 QGDTEWYNIVSWTH 245 +G + V+ Sbjct: 232 KGSDDLKAKVNKII 245 >gi|330977202|gb|EGH77159.1| cystine transporter subunit [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 265 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 84/241 (34%), Gaps = 9/241 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F ++ ++ + L IK G L G+ F+ V +G GF+V+F Sbjct: 11 LFSAMGLMLGAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFEVEFS 70 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 AL+ + + P AL SK++D++ + R+ + Sbjct: 71 EALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSEPYTVSG 127 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + + I S L+G + V GT E ++ KA+ ++ Sbjct: 128 IQALVLKKNEDAIKSAKDLTGKKVGVGLGTNYE----EWLKANVPGAIVKTYDDDPSKIQ 183 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R DA D L AL++ ++ V D S+ A+ +G+ E + Sbjct: 184 DLSVGRIDAILVDR--LAALEMAAKTKNKLVPAGDAFSRQESGIALRKGEPELLAAIDKA 241 Query: 245 H 245 Sbjct: 242 I 242 >gi|307300762|ref|ZP_07580537.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] gi|306904296|gb|EFN34881.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] Length = 271 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 80/243 (32%), Gaps = 11/243 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + +S+L I+ A + IK G +K G+ F + AN G+D D Sbjct: 11 RRTAISVLGAAIVAGLVAPAAAQTVETIKSAGTVKVGMLVDFPPFGIMDANNQPDGYDAD 70 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + L+ + + + +P+ R LQS Q+D+L + T R + F Sbjct: 71 VAKLLAKELGVE---VTIVPVTGPNRIPYLQSNQVDLLVASLGITEERAK--NVDFSQPY 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G ++ L+G +I V +T + + F+ Sbjct: 126 AGISIGVFGAADLAVTKPEDLAGKTIGVARASTQDTATTKIAPQ---DANIQRFDDDASA 182 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + + + ++ + +S+ A+ +G +E V+ Sbjct: 183 VQALLSGQVELIGVSNVVAAQIEAAAPGRFNQKL---QLSQQVQGIAVRKGSSEMLKFVN 239 Query: 243 WTH 245 Sbjct: 240 GFL 242 >gi|110636302|ref|YP_676510.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1] gi|110287286|gb|ABG65345.1| amino acid ABC transporter substrate-binding protein, PAAT family [Chelativorans sp. BNC1] Length = 260 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 94/255 (36%), Gaps = 12/255 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +L + L ++ A L I+ RG + I+T + + + N G+D Sbjct: 1 MKQLLCTFMLAVAALVGSAPLAAAQTLEAIESRGKVLIAIDTAVPPYGMLDENMQPVGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + + ++ +P+ R L+S + D++ T R + + F Sbjct: 61 VDMAKMIAQDLGVE---LEIVPVTGPNRIAYLESNRADMVISTFGVTPERAKT--VNFTI 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + K + SS++ LSG + V G+ + + +E Sbjct: 116 PYGANQIWIFGQKGEAASSIADLSGKPVAVVRGSIQDNVVTRMLP----DAVIRRYEDDA 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + + L + E +L + P + + +GD E+ ++ Sbjct: 172 TAATAFLSGQVPFIATGTLIGDKLVARDTENYERKLLLGLN---PYSIGLRKGDLEFLHL 228 Query: 241 VSWTHYAMVTAEELG 255 ++ Y+ +L Sbjct: 229 INTFIYSYRLGGQLN 243 >gi|289811796|ref|ZP_06542425.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 225 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 11/212 (5%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 16 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 75 Query: 58 GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ + +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 76 GYSQDYSNAIVEVVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 135 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + G + K I L G ++ V +GTT+E+ L + M Sbjct: 136 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGMRI 193 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 I + + + R A+ D + L + Sbjct: 194 ISAKDHGDSFRTLESGRAVAFMMDDALLAGER 225 >gi|104784004|ref|YP_610502.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas entomophila L48] gi|95112991|emb|CAK17719.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas entomophila L48] Length = 266 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 85/250 (34%), Gaps = 14/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + A + D KRG L+ G++ + F G+ GF+ Sbjct: 1 MMKKYLSRLLVGATALIAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFEMTNKRGEIIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ + AL + + D + T R +L L F Sbjct: 61 VDILKAMAKSMGVKLETVS---TAYDGIIPALLTDKFDFIGSGMTLTQER--NLRLNFSE 115 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K+ I S L+ + + TT E+ + Sbjct: 116 PFIVVGQTLLIRKELVGEIKSYKDLNNEKYRITSKLGTTGEMVSKKLIGKAKYHG----Y 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +E + DA+ D L + + PLA + +GD + Sbjct: 172 DNEQEAVMDVVNGKADAFVYDAPYNVVAVEKAGAGK-LAFLEEPFTYEPLAFGLKKGDYD 230 Query: 237 WYNIVSWTHY 246 N ++ + Sbjct: 231 SINFINNFLH 240 >gi|296158005|ref|ZP_06840838.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295891773|gb|EFG71558.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 251 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 86/255 (33%), Gaps = 23/255 (9%) Query: 1 MYKDFFVSILC---LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +S+ C + S + +A L + NG Sbjct: 1 MKLQRLLSLACVTFAVTFGGFSGAASAQTPD------VLNVATDATFPPMEYT-ENGART 53 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD AL+ A+ ++Q+ ++ K L + + D T R + Sbjct: 54 GFDVDLMNALAKAMGK---RVQWTDIDFKGLIPGLIAHRFDAAISAIYITDERAKV--VD 108 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y G ++ I +V+ L+G + VQ GT + L D F + + + E Sbjct: 109 FTDSYYAGGLAVLVKSDSPIKTVADLNGKKVSVQVGTKSVNFLRDNFP----QINRVEVE 164 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + +E+ R DA A + +L ++ A+ + + + Sbjct: 165 KNQEMFDLVGIGRADAAVTGKP---AAYQVAKTRTGFRVLDKTLTTEAYGIAVRKDEPQL 221 Query: 238 YNIVSWTHYAMVTAE 252 + A + A+ Sbjct: 222 KAAFNTAL-ARIKAD 235 >gi|282866759|ref|ZP_06275798.1| extracellular solute-binding protein family 3 [Streptomyces sp. ACTE] gi|282558387|gb|EFB63950.1| extracellular solute-binding protein family 3 [Streptomyces sp. ACTE] Length = 344 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 40/242 (16%), Positives = 81/242 (33%), Gaps = 15/242 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73 + S + + I++RG L G++ + +GFD+D RAL+ I Sbjct: 69 ASLPASSADGPTIQKIRERGKLIAGVDQNSFRWGYRDPETRTLEGFDIDLVRALAKDILG 128 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 D + + + +R AL+ ++D++ R R ++F + GQ + K Sbjct: 129 DADAVIFRAIPTNQRIAALEHDRVDVVVRTMTINCGR--LEQVSFSTAYFQAGQQVLAAK 186 Query: 134 KKGISSVSQ-LSGASICVQAGTTTELTLA---------DYFKAHNMKYHPIVFERVEEID 183 + I+ + L+G +C G+T L D + + + + Sbjct: 187 ESDITGYDRSLAGKRVCSAEGSTAYEALKKESFGAVFEDEHEDTDQDPDLLTVPNQLDCL 246 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + DA D + P+ + + A G + V+ Sbjct: 247 VRLQLGEVDAVVTDNALAAGQAAQ--DPAVELKGDKPFTTEYYGVAAKLGADDLVARVNH 304 Query: 244 TH 245 Sbjct: 305 VL 306 >gi|317486283|ref|ZP_07945115.1| bacterial extracellular solute-binding protein, family 3 [Bilophila wadsworthia 3_1_6] gi|316922453|gb|EFV43707.1| bacterial extracellular solute-binding protein, family 3 [Bilophila wadsworthia 3_1_6] Length = 246 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 82/249 (32%), Gaps = 20/249 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M++ S+L +++L ++F+ L N + N + G+D Sbjct: 1 MFRTVLTSLLAVLVLCGSAFAAE----------KTLIAAANPTWPPMEFLDENKNIIGYD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D A++ I K ++ + F +L+S Q ++++ T R+ F Sbjct: 51 RDIIAAIAEEIG---MKSEFRNIAWDGIFASLESGQANVIASCVTITDKRKK--AYVFSD 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y Q ++ K I L G + VQ GTT L N+ ++ V Sbjct: 106 PYYEVHQAVVVAKDSAIKKPEDLKGKKVGVQIGTTAIEALRKM----NVDIDLRTYDEVG 161 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYN 239 + R R D D + + + + + + + E Sbjct: 162 LVFEDMRNGRLDVVVCDDPVARYYASRKEGYKDLMKVAFLTEDVEYIGFVFSKDNAELAA 221 Query: 240 IVSWTHYAM 248 V+ A+ Sbjct: 222 QVNKGLKAI 230 >gi|222086403|ref|YP_002544937.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221723851|gb|ACM27007.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 264 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 82/252 (32%), Gaps = 14/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + ++ L + +L S + A L DI RG ++ + F V + Sbjct: 1 MKRRQLLTALGMAMLAMGSLSSPHAARADALSDITSRGTIRVAVPQDFPPFGSVGPDMAP 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G+D+D + + + + + R LQ+ ++D++ + R+ + Sbjct: 61 MGYDIDMANLIGEKLGVKTELVP---VTSANRIPYLQTNKVDLVISSLGKNAERQAV--I 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G + LSG +I V G +L L + Sbjct: 116 DFTDAYAPFFNGVFGPADVAATKPEDLSGKTIGVTRGAIEDLALTKVAPQ---DATIKRY 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E +A+ + + D A+ P + + +I+ SP + + + Sbjct: 173 EDNNGTISAFLSGQVDLVATGNVVAAAILA--KNPPKKPEMKFLITNSPCFIGLNKSEPA 230 Query: 237 WYNIVSWTHYAM 248 V+ A Sbjct: 231 LQKKVNDIIAAA 242 >gi|290956973|ref|YP_003488155.1| glutamate uptake system binding subunit [Streptomyces scabiei 87.22] gi|260646499|emb|CBG69596.1| glutamate uptake system binding subunit [Streptomyces scabiei 87.22] Length = 283 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 76/211 (36%), Gaps = 5/211 (2%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 +K GI G +G + GFDVD ++ + DP +I+++ + +R AL Sbjct: 44 KIKVGIKYDQPGLGLKNPDGSFSGFDVDVATYVAKELGYDPKQIEFVETKSADRENALAR 103 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 + ++ R + F Q ++ IS + L+G ++C G+ Sbjct: 104 GDVKFIAATYSINPERAKL--VDFAGPYLLAHQDLLVKADSDISKGTDLNGKTLCSVTGS 161 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T+ + K + E A ++ DA T D S L ++ + Sbjct: 162 TSAENVKKDIA---PKAQLKEYGGYSECIAGLQSGAVDAVTTDDSILAGFAAQDNYKGQF 218 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + +S + +GD + ++ Sbjct: 219 KLAGLKLSNENYGIGVKKGDKATVDKINAAL 249 >gi|227903962|ref|ZP_04021767.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus acidophilus ATCC 4796] gi|227868353|gb|EEJ75774.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus acidophilus ATCC 4796] Length = 286 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 67/300 (22%), Positives = 118/300 (39%), Gaps = 43/300 (14%) Query: 1 MY-KDFF---VSILCLIILFFTS----------FSTNASILG------DIKKRGFLKCGI 40 M K+ F +SIL ++++ ++ T+AS +IK+RG+L+ + Sbjct: 1 MKVKNIFNWTISILAILLVIISAYFGFAQKGLNSGTSASRWSNQNGVSEIKRRGYLRVAV 60 Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 L + V +NG G+DV ++ + I+++ +NA R L S + DI+ Sbjct: 61 FGDLPPYGWVNSNGKRVGYDVYLAHRMAQDLGVK---IRFVQVNANNRVDTLNSNKADII 117 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 N T R+ + F G I K I+S +QL + V GTT E Sbjct: 118 LANFTVTPERK--DVVDFAKPYMKVSVGVISPKSAPITSANQLKNKKLIVTKGTTAENYF 175 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 + + + F+ + A + R A D S LYA P V + I Sbjct: 176 SQ-----QKNVNLLKFDSKTQQFNALKNGRGAALADDNSYLYAW--VKQNPKYTVGIKSI 228 Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280 K ++PA+ +G+ ++ IT+ N + N +++ + G D Sbjct: 229 GPKQYISPAVKKGNRSLLKWINK-----------EITKLNKESFFVEDYNKELRPYFGKD 277 >gi|15641865|ref|NP_231497.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587294|ref|ZP_01677066.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 2740-80] gi|121727107|ref|ZP_01680281.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae V52] gi|147673397|ref|YP_001217397.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O395] gi|153818873|ref|ZP_01971540.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae NCTC 8457] gi|153823970|ref|ZP_01976637.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae B33] gi|153825196|ref|ZP_01977863.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae MZO-2] gi|153830549|ref|ZP_01983216.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 623-39] gi|183179514|ref|ZP_02957725.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae MZO-3] gi|227081992|ref|YP_002810543.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae M66-2] gi|229508040|ref|ZP_04397545.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae BX 330286] gi|229511721|ref|ZP_04401200.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae B33] gi|229515243|ref|ZP_04404703.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae TMA 21] gi|229518859|ref|ZP_04408302.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae RC9] gi|229607587|ref|YP_002878235.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae MJ-1236] gi|254226033|ref|ZP_04919632.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae V51] gi|254286778|ref|ZP_04961732.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae AM-19226] gi|254848949|ref|ZP_05238299.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|297579381|ref|ZP_06941309.1| amino acid ABC transporter [Vibrio cholerae RC385] gi|298498098|ref|ZP_07007905.1| amino acid ABC transporter [Vibrio cholerae MAK 757] gi|9656393|gb|AAF95011.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548454|gb|EAX58512.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 2740-80] gi|121630485|gb|EAX62877.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae V52] gi|125621416|gb|EAZ49751.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae V51] gi|126510601|gb|EAZ73195.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae NCTC 8457] gi|126518507|gb|EAZ75730.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae B33] gi|146315280|gb|ABQ19819.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O395] gi|148873979|gb|EDL72114.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 623-39] gi|149741175|gb|EDM55226.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae MZO-2] gi|150423205|gb|EDN15152.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae AM-19226] gi|183012925|gb|EDT88225.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae MZO-3] gi|227009880|gb|ACP06092.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae M66-2] gi|227013761|gb|ACP09971.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O395] gi|229343548|gb|EEO08523.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae RC9] gi|229347948|gb|EEO12907.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae TMA 21] gi|229351686|gb|EEO16627.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae B33] gi|229355545|gb|EEO20466.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae BX 330286] gi|229370242|gb|ACQ60665.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae MJ-1236] gi|254844654|gb|EET23068.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|297536975|gb|EFH75808.1| amino acid ABC transporter [Vibrio cholerae RC385] gi|297542431|gb|EFH78481.1| amino acid ABC transporter [Vibrio cholerae MAK 757] Length = 260 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 86/254 (33%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + + K+ ++ GI F+ +A+G KGFD Sbjct: 3 MKKWLVATALIATTISGVTQA---------KEWKTVRFGIEGAYPPFSWTEADGSLKGFD 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + + +P + +L +++ D + T R+ + F Sbjct: 54 VDMANALCAEM---QVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 108 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 FI K + L G I VQ TT + + D + + + Sbjct: 109 KYAQIPNKFIAKKGADLAFTKEGLKGVKIGVQRATTHDKYITDNY---GDTVDIVRYGSF 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E R A GD SAL L + + ++ + A+ + D Sbjct: 166 DEAYLDLANGRIAAVLGDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQD 225 Query: 235 TEWYNIVSWTHYAM 248 E + A+ Sbjct: 226 KELTEKLDAAITAL 239 >gi|242279193|ref|YP_002991322.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] gi|242122087|gb|ACS79783.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] Length = 271 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 51/250 (20%), Positives = 88/250 (35%), Gaps = 20/250 (8%) Query: 1 MYKD--FFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + + +L L + + S L I K G L+CGI +G + F G Sbjct: 1 MKRICMMLIMVLALGFAATANAADIDLAKKSTLNSILKSGELRCGIASGYIPFQMTDKKG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GF++D R ++ A+ + + AL + +IDI++ R +L Sbjct: 61 RIVGFEIDLAREMAKAMGVKFVPVN---MEFDGIIPALLTNKIDIITAGMTVNQER--NL 115 Query: 115 GLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAG--TTTELTLADYFKAHNMK 170 + F GQ +++KK I S L+ + + TT E + K Sbjct: 116 QINFAEPFMVVGQTVLLNKKLEGKIKSYKDLNKPEYTIVSKLGTTGEQAAKRFIPKAKYK 175 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 F+ + + DA D+ V L + + PL I Sbjct: 176 ----SFDLETDAALEVLNGKADAMIYDLPFNAIFMAEQGEGK-LVFLDEPFTYEPLGWGI 230 Query: 231 IQGDTEWYNI 240 +GD ++ N Sbjct: 231 SKGDPDFLNF 240 >gi|289435591|ref|YP_003465463.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171835|emb|CBH28381.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 486 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 100/279 (35%), Gaps = 24/279 (8%) Query: 1 MYKDFFVSILCLIILF---------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K+F + + ++F + L I+++G L G++ + Sbjct: 1 MQKNFLQKLAAIALVFIFVFSGFTTVFAADNQDETLKKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKIVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F F Q ++ K +SV+ +G + Q TT E + Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVVRKADKEKFTSVNDFNGVKVGAQKQTTQEELAQNEL-- 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ +++ DA + A + + I + SK Sbjct: 174 --VGSDVVSLQKVPDLLLNLSSNKVDAVVLEGPVAEAYLSQDKTLAMADIKFENGSKE-T 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIALPKGSTALQEKVNASIKEIQDTGLLKEYQKEANKLM 269 >gi|223999121|ref|XP_002289233.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220974441|gb|EED92770.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 871 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 70/329 (21%), Positives = 132/329 (40%), Gaps = 48/329 (14%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +++RG+++CG+ + + F D CR++++ + DP I ++ Sbjct: 357 TLAIVQERGYVRCGLFQ---------KKTEARNFRRDLCRSVAAVVLLDPDSIIETDVHV 407 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISL-----GLAFRPITYFDGQGFIMHKKKGI--- 137 RF L + +D+L+ +TL RE++ G +F Y+DG F + Sbjct: 408 NNRFPMLYDRAVDLLAAGETYTLEREVNEPTTGAGFSFTTPYYYDGMVFGGNSTSVYCAE 467 Query: 138 --SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + + ICVQ TT ++ F A + E + +C+A+ Sbjct: 468 ERKRYDECANLKICVQESTTHYSYVSANFAAGFYT----SVRSLSESAVFFLQDKCNAFA 523 Query: 196 GDIS--ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 G+ + VI + PL+ A D EW +IV+W A++ EE Sbjct: 524 GERMEILSSVSIQNLTETNAVVIGNKTYTSEPLSIATRNDDQEWSDIVNWVIQALIFGEE 583 Query: 254 LGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRN 313 G+ + + + +++T I ++N G + +GNYG++F RN Sbjct: 584 NGLVKN--SSLCENST---------IVDTTNTGLNF-------LNSVYCVGNYGQLFARN 625 Query: 314 LGNQSELKIPRGYNALWSKG-GLMYAPPI 341 + + R ++G G++Y P Sbjct: 626 HED----PMDRSQMNEVNQGTGMLYVIPF 650 Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 36/229 (15%), Positives = 57/229 (24%), Gaps = 42/229 (18%) Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F G K +S+ G C ++ F + + Sbjct: 657 HGAKPFTGGQLNCGVVIQNDKYHNVSN----MGIDYCSTLASS-------MFDGNVYAVN 705 Query: 173 PIVFERVEE--IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA--- 227 VF EE R D G + Sbjct: 706 VTVFSEDEEERAYLELDKRRLDVLVGVRATQNYDFEDLPSRRGLTFSSPYFYGDESGEVD 765 Query: 228 -----PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKS 282 + D + + V+ + + A E IT++ Q+ T G + Sbjct: 766 VSFFPMVTREDDVLFSSFVNCIVLSTLYAAENAITKEVYVQMPLIT-------IFGNEYL 818 Query: 283 SNIGEALGLTKDWTYR-IIRHMGNYGEMFDRNLGNQS-ELKIPRGYNAL 329 W R I GNY EM++++ G R NAL Sbjct: 819 ------------WALRDAISANGNYDEMYEKHFGIGKDSDPTSRARNAL 855 >gi|319761801|ref|YP_004125738.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|330826339|ref|YP_004389642.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans K601] gi|317116362|gb|ADU98850.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|329311711|gb|AEB86126.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus denitrificans K601] Length = 253 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 80/250 (32%), Gaps = 26/250 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L+ L + + + L+ G+N F A+G+ GFD Sbjct: 1 MQKKI--AALALVGLAGAACAAD------------LRVGLNPAYEPFESKTASGEIVGFD 46 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I K ++ LQ+K+ D++ + T R + F Sbjct: 47 VDIANALCEQI---KRKCVFVESEWDSIIPGLQAKKFDVVISSMSITPERARV--VDFTN 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ K + L G I V +T E K + ++ Sbjct: 102 RYYKTPSAIVVKKSVKYEGPASLKGMKIGVLKSSTQEKWALGELKPAG--VTVVPYQSQN 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-----IISKSPLAPAIIQGDT 235 ++ +A R D D + L ++ + + A+ +G Sbjct: 160 QVYLDIQAGRLDGTVADKVEVNGGFLRKPEGKDYGYVGPDQYDAKYYGEGIGIALRKGQG 219 Query: 236 EWYNIVSWTH 245 + ++ Sbjct: 220 DLKKQLNEAI 229 >gi|139439228|ref|ZP_01772670.1| Hypothetical protein COLAER_01684 [Collinsella aerofaciens ATCC 25986] gi|133775252|gb|EBA39072.1| Hypothetical protein COLAER_01684 [Collinsella aerofaciens ATCC 25986] Length = 286 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 76/220 (34%), Gaps = 9/220 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + L G + + V +G++ GFD+D +A++ + ++Y ++ + Sbjct: 51 ESKKLVVGFDKSYPPYGFVGDDGEYTGFDLDLAKAVADKQGWE---VKYEAIDWDAKDTL 107 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 L S I+ + + F + Q ++ K GI L+G ++ Q Sbjct: 108 LNSGAINCIWNGFTMEGRED---DYTFSEPYMLNEQVLVVKKDAGIKGWDDLAGKTVITQ 164 Query: 152 AGTTTELTLA-DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + L D + DA D+S A + Sbjct: 165 TDSAAQDVLEGDQKDLAATFATLDTIGEYNTAFMQLESGAVDAVACDLSI--AQYQLAAK 222 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 P + L + +S A +GDT+ + V+ + A+ Sbjct: 223 PDAYTQLDEPLSSEHYAVGFKKGDTKSADAVAESLKALYE 262 >gi|318059839|ref|ZP_07978562.1| glutamate binding periplasmic protein [Streptomyces sp. SA3_actG] gi|318077304|ref|ZP_07984636.1| glutamate binding periplasmic protein [Streptomyces sp. SA3_actF] Length = 354 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 84/227 (37%), Gaps = 10/227 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +++ + RG L G E +G + GFD++ + +++ + ++I + Sbjct: 102 DSATWRKARARGRLVVGAKEDQPYLGEKDPASGRYSGFDIEIAKMVAAGLGFPANRISFR 161 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + + R +LQ+ QID R+ +G F Y GQG ++ K GI Sbjct: 162 TIASANRETSLQNGQIDYYVGTYTINDNRKKLVG--FAGPYYMAGQGLLVRKDEDGIKGP 219 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L G +C AG+T + + + ++ ++ DA T D S Sbjct: 220 ADLDGKRVCSAAGSTPYQRIQHDYPKA----DLVSYDTYSICVDNLLTYQVDAVTTDDSI 275 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 L P E ++ S+ P + + D + A Sbjct: 276 LLGYAAKV--PEELKVVGKPFSEEPYGIGVPRKDNALRLAIDGILAA 320 >gi|86742202|ref|YP_482602.1| extracellular solute-binding protein [Frankia sp. CcI3] gi|86569064|gb|ABD12873.1| amino acid ABC transporter substrate-binding protein, PAAT family [Frankia sp. CcI3] Length = 296 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 86/228 (37%), Gaps = 9/228 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 T + + + G + G F +G +GFDV+ + ++ A+ K+ Y+ Sbjct: 45 TAGTTMARLHDAGKIIIGTKFDQNLFGLKNLSGQPEGFDVEISKIVTDALGIPRDKVSYV 104 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + R +Q ++D++ R+ + F Y GQ ++ K + Sbjct: 105 ETVSANREPFIQQGRVDLVVATYTINDKRKKV--VDFAGPYYVSGQSIMVSKNNTDITGK 162 Query: 142 Q-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G +C +G+T + ++F+ + A + + DA T D Sbjct: 163 DTLAGKKVCSVSGSTPAENIRRVAPTA----QLVLFDVYSKCADALKNGQVDAVTTDKGI 218 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 L L + P ++ +K P + +GD + N ++ T A Sbjct: 219 LLGL--VDKDPDAFKVVGGTFTKEPYGIGLKKGDDAFRNFINDTLEAA 264 >gi|303229869|ref|ZP_07316645.1| bacterial extracellular solute-binding protein, family 3 [Veillonella atypica ACS-134-V-Col7a] gi|303232048|ref|ZP_07318751.1| bacterial extracellular solute-binding protein, family 3 [Veillonella atypica ACS-049-V-Sch6] gi|302513154|gb|EFL55193.1| bacterial extracellular solute-binding protein, family 3 [Veillonella atypica ACS-049-V-Sch6] gi|302515425|gb|EFL57391.1| bacterial extracellular solute-binding protein, family 3 [Veillonella atypica ACS-134-V-Col7a] Length = 269 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 79/256 (30%), Gaps = 17/256 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFD 60 K S++ ++ ++S L G N V F + GFD Sbjct: 7 KKLVLGSLMVVMAASLVGGCGSSST---TTSNKKLIVGTNATFVPFEFKDDKTQDYAGFD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D RA+ I D ++ + AL + ID+ + T R S + F Sbjct: 64 IDLIRAIGKRINKD---VELKNVAFDALIPALNTHDIDVAASGMTITKAR--SEKVLFSS 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + + I S+ L I Q GTT F+ Sbjct: 119 PYYENALAIVYKDSNSIHSLDDLKNKKIAAQMGTTGSDLAHKI-----EGTSVKEFDHSN 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEWYN 239 E + DA D+ A + P EH ILP +K L A+ + + Sbjct: 174 EALLELQNGGVDATVIDLP--VAQYYSTKHPDEHIQILPYPNTKEYLGLALNKDNKALQE 231 Query: 240 IVSWTHYAMVTAEELG 255 ++ M E Sbjct: 232 EINKAIADMKADGEFN 247 >gi|300697547|ref|YP_003748208.1| amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum CFBP2957] gi|299074271|emb|CBJ53816.1| putative amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum CFBP2957] Length = 280 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 92/249 (36%), Gaps = 13/249 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRAL 67 + L L SF A +I+K L+CG + FA + GFDVD C AL Sbjct: 10 LTVLACLCSASFPVLADQWAEIQKNKELRCGTFADVPPFAAPDPKTREMVGFDVDMCNAL 69 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + + PL+ + R ++ ++D+ N +TL R + F Y + Sbjct: 70 AKRMGVTA---KITPLSVEARVPEVKMGRVDVTVANLAYTLSRAEQIQ--FSDPYYLAKE 124 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + S + G + G+T+EL++ P+ F+ A + Sbjct: 125 MLAVRASDPGKSKADYKGKRLASAKGSTSELSI------KMNGSEPVTFQDTGSAYMAVQ 178 Query: 188 AHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + L + E ++ + + P+ + +G+ + V+ Sbjct: 179 QGKALGIVSNTMTITKLVNQSKTGGIELKVIAEPMIYQPIGVGMKKGEPQLLAKVNEALL 238 Query: 247 AMVTAEELG 255 AM A E+ Sbjct: 239 AMDKAGEIN 247 >gi|293572977|ref|ZP_06683920.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E980] gi|291606955|gb|EFF36334.1| amino acid ABC transporter, amino acid-binding protein [Enterococcus faecium E980] Length = 260 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 35/237 (14%), Positives = 75/237 (31%), Gaps = 8/237 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +A I + + G++ V +G GFD+D +A+ + + Sbjct: 25 ASADNWAAINEEKKIVIGLDDTFVPMGFRDKDGKLTGFDIDLAKAVFEQYG---ITVDFQ 81 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P++ + L + ID++ T RE + F + Q I K+ GI+S Sbjct: 82 PIDWSMKEFELNNGTIDLIWNGYSKTPAREK--KVQFTKPYMENDQVLITPKESGITSFE 139 Query: 142 QLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 Q+ + Q G++ + K ++++ E ++ R D D Sbjct: 140 QMKNKRLGAQNGSSGYDVFTKQPEVLKEIVKNQDAVLYDSFNEALIDLKSGRIDGLLMDK 199 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + + A + + D ++ + E Sbjct: 200 VYADYYLKQRNELEDFNMTKGSYESEDFAVGVRKSDDTLVKKINEAFDRLEKTGEFQ 256 >gi|126179307|ref|YP_001047272.1| extracellular solute-binding protein [Methanoculleus marisnigri JR1] gi|125862101|gb|ABN57290.1| amino acid ABC transporter substrate-binding protein, PAAT family [Methanoculleus marisnigri JR1] Length = 257 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 91/266 (34%), Gaps = 18/266 (6%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + C++ + + + + GI+ F+ + +G+ +GF Sbjct: 1 MKKYGILTLLACIVAVLAVAGAGCTGTTTEP----DYVVGIDGAYPPFSYIDKDGNAQGF 56 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD + ++ + + ++ ++ LQ+ +ID++ T R + F Sbjct: 57 DVDSMKWIAEKKGIE---VTFMAVDWDAIIPTLQAGKIDMVYAGMSITPER--LEKVNFS 111 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNM--KYHPIVF 176 + Q + + ++ L+G I VQ G T + + + K + + Sbjct: 112 NPYWSINQDVVAREDSNVTLDDVLAGKAIIGVQRGCTAAIWIEENLVETGKMSKDNLRYY 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + R DA D ++ + +P + + + + AI + DT Sbjct: 172 PDTPAAVSDLEIGRIDAVMYDDVSI--QDIIAGKPLKTIGSVETQEQEQFGVAIRKEDTA 229 Query: 237 WYNIVSW---THYAMVTAEELGITQK 259 ++ A EEL Sbjct: 230 LLEFMNEGIAELQADPYWEELKEKHN 255 >gi|296127371|ref|YP_003634623.1| extracellular solute-binding protein family 3 [Brachyspira murdochii DSM 12563] gi|296019187|gb|ADG72424.1| extracellular solute-binding protein family 3 [Brachyspira murdochii DSM 12563] Length = 275 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 84/262 (32%), Gaps = 22/262 (8%) Query: 1 MYKDFFVSILCLIILFFTSF-------------STNASILGDIKKRGFLKCGINTGLVGF 47 M + +L + + ST + L +K G L G++ Sbjct: 1 MKRILTFLLLAFFAVIISCNNNSGSANNNAAPESTEDNSLQKVKDAGKLVLGLDDTFAPM 60 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 NG+ GFD+D + ++S + + ++ P+ L+L +D+L Sbjct: 61 GFRDENGEVVGFDIDLAKEVASRLGVE---LEIKPIEWSSSILSLNKGDVDVLWNGVTIN 117 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKA 166 R + F + + I+S LSG + VQ G+ E AD + Sbjct: 118 DAR--KQQINFSKPYLNNRLVIVKAIDDAAINSKDDLSGKVLGVQVGSNDEALTAD--PS 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 ++ +A R DA D A ++ + V+ +++ Sbjct: 174 SKDAKEIRRYDVNVNAFLDLQAKRIDAVIIDEVA-AQYYISEKKAPFVVVDNSPLTEELY 232 Query: 227 APAIIQGDTEWYNIVSWTHYAM 248 + D + V M Sbjct: 233 GVGFRKSDEKLLAEVDRILDEM 254 >gi|169826264|ref|YP_001696422.1| amino-acid ABC transporter extracellular-binding protein yqiX [Lysinibacillus sphaericus C3-41] gi|168990752|gb|ACA38292.1| Probable amino-acid ABC transporter extracellular-binding protein yqiX precursor [Lysinibacillus sphaericus C3-41] Length = 263 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 88/264 (33%), Gaps = 19/264 (7%) Query: 1 MYKDFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKA-NG 54 M F+ IL L I + N S + LK G + F V A G Sbjct: 1 MKNKLFMMILVLAIGVLAACGAKEDDANNSNADSSTDKQVLKVGTSADYAPFEYVDAAKG 60 Query: 55 D-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFD+D + + I D +Q ++ ALQ+ +ID++ RE Sbjct: 61 EEIIGFDIDLIKLVGEKIGVD---MQVQDMDFNSLVPALQAGKIDVVISGMTPNPEREKV 117 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F Q I+ K GI + L+G + VQ + E + K ++ Sbjct: 118 --VDFSDQYNETEQVIIVKKDSGIKKEADLAGKKVGVQTASIQENLGNEIAKKVDVSVEG 175 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 EI + R DA + TND+ + + +A Sbjct: 176 RTRI--PEIIQDMMSKRLDAGILEGGVAKGYLKTNDQLAAFPVEEQPEDFKAIAV---PK 230 Query: 234 DTEWYNIVSWTHYAMVTAEELGIT 257 + ++ + AEE I Sbjct: 231 GSNLKEKINKALKEL--AEEGKIQ 252 >gi|320546646|ref|ZP_08040958.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] gi|320448701|gb|EFW89432.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] Length = 280 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 36/255 (14%), Positives = 78/255 (30%), Gaps = 15/255 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI-------LGDIKKRGFLKCGINTGLVGFAEVKANG 54 K +++ + + + +++S K G + G + V +G Sbjct: 4 KKILLSALVLVSTVALAACGSSSSKKVSNTDQWDSYVKDGKITIGFDNTFVPMGYEDEDG 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+D A+ + K+++ +N + L + ID++ T R S Sbjct: 64 KNVGFDIDLANAVFAEYG---IKVKWQSINWDMKETELNNGTIDLIWNGYSITDER--SE 118 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KY 171 + F + Q + K I+S + + G + Q+G++ K Sbjct: 119 KVRFTNPYMINEQVLVTKKSSDITSFAGMKGKVLGAQSGSSGYDAFNANPKVLKNIVSGG 178 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 +E + + R D D ++ I+ A Sbjct: 179 DATQYETFTQALIDLKNDRIDGLLIDKVYANYYLEQEGELDKYNIISSEFDGEDFAVGAR 238 Query: 232 QGDTEWYNIVSWTHY 246 + D ++ Sbjct: 239 KADKTLVKKINQAFQ 253 >gi|303257202|ref|ZP_07343216.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderiales bacterium 1_1_47] gi|331000693|ref|ZP_08324344.1| glutamine ABC transporter periplasmic protein [Parasutterella excrementihominis YIT 11859] gi|302860693|gb|EFL83770.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderiales bacterium 1_1_47] gi|329570608|gb|EGG52326.1| glutamine ABC transporter periplasmic protein [Parasutterella excrementihominis YIT 11859] Length = 253 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 84/258 (32%), Gaps = 19/258 (7%) Query: 1 MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKG 58 M++ ++ LC + + S S + + D G L G ++ F + +G + G Sbjct: 1 MFRRNLLAFLCALSMLPVSASFAKSPTIED----GVLLVGTDSSFAPFEFLAEDGKNFTG 56 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D RA+ + + + AL++ +D + R+ + F Sbjct: 57 FDMDLIRAIGKELGYK---VVVQNMGFDATVPALRTGIVDAVIAGMTINEKRKKF--VDF 111 Query: 119 RPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G ++ S+ L G I Q GTT A + F Sbjct: 112 SDPYYTSGLIIMVPSSDTTTKSIKDLEGKKIGAQVGTTGMFRAEKVPGAK-----VVTFA 166 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E ++ DA D + ++ + A+ +G+ E Sbjct: 167 NAAETFLEFQNGGVDAVIQDFPVVAYYVAQGGNKG--RLVGPKMEAEEYGIAVTKGNKEL 224 Query: 238 YNIVSWTHYAMVTAEELG 255 ++ ++ + E Sbjct: 225 VAQINKALASLKKSGEFQ 242 >gi|317046638|ref|YP_004114286.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316948255|gb|ADU67730.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 279 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 92/250 (36%), Gaps = 15/250 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + + + L +L + S +A ++ +IK G LKC + + + F+ G Sbjct: 3 MKRRTTIGLALLPLLAIS--SAHADLMANIKSSGELKCAVYSDVPPFSSPDPQTRQLAGM 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C AL+ + + +P + + R + + + D+L N +T R + F Sbjct: 61 DVDLCNALAKQMGVK---VTLVPTSVEARIAVIATGRADVLIANLAYTKTR--GSQIQFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + ++ +S G I GTT+E ++ H + F+ Sbjct: 116 DPYYVAKEMLLVKAPLADKPLSYFKGKRISATKGTTSEQSI------HLKGARAVTFQDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 A ++ + + + + ++ + ++ P+ + + + Sbjct: 170 ASAFLAVEQNKALGFVTNTMTGIKMITQAKKDGIDLAMIKEPMALEPIGVGMKRDEPALL 229 Query: 239 NIVSWTHYAM 248 V+ AM Sbjct: 230 TSVNSGLKAM 239 >gi|227552458|ref|ZP_03982507.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecium TX1330] gi|257896808|ref|ZP_05676461.1| extracellular solute-binding protein [Enterococcus faecium Com12] gi|293378563|ref|ZP_06624726.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium PC4.1] gi|227178404|gb|EEI59376.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecium TX1330] gi|257833373|gb|EEV59794.1| extracellular solute-binding protein [Enterococcus faecium Com12] gi|292642892|gb|EFF61039.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium PC4.1] Length = 271 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 35/237 (14%), Positives = 75/237 (31%), Gaps = 8/237 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +A I + + G++ V +G GFD+D +A+ + + Sbjct: 25 ASADNWAAINEEKKIVIGLDDTFVPMGFRDKDGKLTGFDIDLAKAVFEQYG---ITVDFQ 81 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P++ + L + ID++ T RE + F + Q I K+ GI+S Sbjct: 82 PIDWSMKEFELNNGTIDLIWNGYSKTPAREK--KVQFTKPYMENDQVLITPKESGITSFE 139 Query: 142 QLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 Q+ + Q G++ + K ++++ E ++ R D D Sbjct: 140 QMKNKRLGAQNGSSGYDVFTKQPEVLKERVKNQDAVLYDSFNEALIDVKSGRIDGLLMDK 199 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + + A + + D ++ + E Sbjct: 200 VYADYYLKQRNELEDFNMTKGSYESEDFAVGVRKSDDTLVKKINEAFDRLEKTGEFQ 256 >gi|312963772|ref|ZP_07778243.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] gi|311281807|gb|EFQ60417.1| extracellular solute-binding protein, family 3 [Pseudomonas fluorescens WH6] Length = 261 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 94/274 (34%), Gaps = 14/274 (5%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + A+ L DI RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQAPAQANGLDDIVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + F Sbjct: 61 DIDTAKLLADQL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPEREKV--IDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ISS L G +I V G ++ L + FE Sbjct: 116 KAYAPFYLAVFGPPDAAISSTDDLKGKTISVTRGAIEDIELTAVAPK---EATIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A ++ P L + SP+ + + + Sbjct: 173 NSTIAAYLAGQVDLIASGNVVMVA--ISERNPKRVPALKVKLKDSPVYVGVNKNEPALLE 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 V+ A L KN Q K+ D+ Sbjct: 231 KVNQILVAAKADGSLE---KNAMQWLKEPLPKDL 261 >gi|229529114|ref|ZP_04418504.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae 12129(1)] gi|229332888|gb|EEN98374.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae 12129(1)] Length = 260 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 86/254 (33%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + + K+ ++ GI F+ +A+G KGFD Sbjct: 3 MKKWLVATALIATTISGVTQA---------KEWKTVRFGIEGAYPPFSWTEADGSLKGFD 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + + +P + +L +++ D + T R+ + F Sbjct: 54 VDMANALCAEM---QVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 108 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 FI K + L G I VQ TT + + D + + + Sbjct: 109 KYAQIPNKFIAKKGADLAFTKEGLKGVKIGVQRATTHDKYITDNY---GDTVDIVRYGSF 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E R A GD SAL L + + ++ + A+ + D Sbjct: 166 DEAYLDLANGRIAAVLGDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQD 225 Query: 235 TEWYNIVSWTHYAM 248 E + A+ Sbjct: 226 KELTEKLDAAITAL 239 >gi|238752741|ref|ZP_04614211.1| Cystine-binding periplasmic protein [Yersinia rohdei ATCC 43380] gi|238709072|gb|EEQ01320.1| Cystine-binding periplasmic protein [Yersinia rohdei ATCC 43380] Length = 253 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 76/241 (31%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + + L +L +K+RG L G+ F+ +G GF+VDF A Sbjct: 1 MVAVALATGLNVKSYAAGDLLDQVKERGVLVVGLEGTYPPFSFQGEDGKLTGFEVDFANA 60 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L+SK+ID+ + R+ F G Sbjct: 61 LAEHMGVKA---KITPTKWDGMLASLESKRIDVAINQVTISDERKK--KYDFSTPYTVSG 115 Query: 127 QGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + K + L G + V G+ E L + K ++ Sbjct: 116 IQVLTKKGNEGQFNKPEDLEGKKVGVGLGSNYEQWLRENLK----GVDIRTYDDDPTKYQ 171 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L ++ A+ + + E ++ Sbjct: 172 DLRVGRTDAILVDR--LAALDLVKKTGGTLAAAGPAFARQESGVALRKNNPELLAAINQA 229 Query: 245 H 245 Sbjct: 230 I 230 >gi|254387161|ref|ZP_05002431.1| sugar-binding protein [Streptomyces sp. Mg1] gi|194345976|gb|EDX26942.1| sugar-binding protein [Streptomyces sp. Mg1] Length = 330 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 88/254 (34%), Gaps = 16/254 (6%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + + + I+ G L G++ + +G GFD+ +A++ I D SK+ Sbjct: 75 STVDGPTIERIRSAGKLVAGVDQNSFKWGYRNPDGHLDGFDIALVKAIAKDILGDESKVI 134 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 Y + +R ALQ+ ++D++ R R +AF + GQ ++ K I+ Sbjct: 135 YRAIPTSQRIPALQAGRVDVVVRTMTINCKR--LEDVAFSTAYFEAGQQVLVPKGSTITG 192 Query: 140 VSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L G IC AG+T E L + + P+ + + D D Sbjct: 193 YDASLKGRKICFAAGSTAEAALT----SRSYGSVPVTVPNQLDCLVRLQLGEVDGIITDN 248 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + + ++ +K A+ + T+ V+ E Sbjct: 249 ALAAGQAAQDP---SVQLVGSPFTKEFYGVAMNKDATDLVRRVNKVL------ENYRAGG 299 Query: 259 KNINQVSKDTTNPD 272 + + + + Sbjct: 300 NDSPWMVAYRAHFE 313 >gi|91778079|ref|YP_553287.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91690739|gb|ABE33937.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 251 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 86/255 (33%), Gaps = 23/255 (9%) Query: 1 MYKDFFVSILC---LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +S+ C + S + +A L + NG Sbjct: 1 MKLQRLLSLACVTFAVTFGGFSGAASAQTPD------VLNVATDATFPPMEYT-ENGART 53 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD AL+ A+ ++Q+ ++ K L + + D T R + Sbjct: 54 GFDVDLMNALAKAMGK---RVQWTDIDFKGLIPGLIAHRFDAAISAIYITDERAKV--VD 108 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y G ++ I +V+ L+G + VQ GT + L D F + + + E Sbjct: 109 FTDSYYAGGLAVLVKSDSPIKTVADLNGKKVSVQVGTKSVNFLRDNFP----QINRVEVE 164 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + +E+ R DA A + +L ++ A+ + + + Sbjct: 165 KNQEMFDLVGIGRADAAVTGKP---AAYQVAKTRTGFRVLDKTLTTEAYGIAVRKDEPQL 221 Query: 238 YNIVSWTHYAMVTAE 252 + A + A+ Sbjct: 222 KAAFNTAL-ARIKAD 235 >gi|307130478|ref|YP_003882494.1| amino acid ABC transporter periplasmic binding protein [Dickeya dadantii 3937] gi|306528007|gb|ADM97937.1| amino acid ABC transporter periplasmic binding protein (precursor) [Dickeya dadantii 3937] Length = 278 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 95/244 (38%), Gaps = 13/244 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCR 65 +S + + FTS A +L D+ RG LKC + + + F+ AN G DVD C Sbjct: 6 LSAVLASSVLFTSIGAQADLLADMTARGELKCAVYSDVPPFSSPDANTRQLVGMDVDLCN 65 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL+ + K+ +P + + R + + + D+L N +T R + F Y Sbjct: 66 ALAKQMG---LKLTLVPTSVEARIAVIVTGRADVLIANLAYTKTR--GNQIQFSDPYYVA 120 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + ++ K+ ++ G I GTT+E ++ + + F+ A Sbjct: 121 KEMLLVKKENADKTLEYFKGKRISATKGTTSEQSI------NLKGGKAVTFQDSASAFLA 174 Query: 186 YRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 ++ + ++ + E ++ + ++ P+ + + + V+ + Sbjct: 175 LEQNKAVGFVTNMMTGIKMISQAKKDGIELAMIKEPMALEPIGVGMKRDEPALLAAVNTS 234 Query: 245 HYAM 248 M Sbjct: 235 LKTM 238 >gi|229523882|ref|ZP_04413287.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae bv. albensis VL426] gi|229337463|gb|EEO02480.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae bv. albensis VL426] Length = 260 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 86/254 (33%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + + K+ ++ GI F+ +A+G KGFD Sbjct: 3 MKKWLVATALIATTISGVTQA---------KEWKTVRFGIEGAYPPFSWTEADGSLKGFD 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + + +P + +L +++ D + T R+ + F Sbjct: 54 VDMANALCAEM---QVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 108 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 FI K + L G I VQ TT + + D + + + Sbjct: 109 KYAQIPNKFIAKKGADLAFTKEGLKGVRIGVQRATTHDKYITDNY---GDTVDIVRYGSF 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E R A GD SAL L + + ++ + A+ + D Sbjct: 166 DEAYLDLANGRIAAVLGDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQD 225 Query: 235 TEWYNIVSWTHYAM 248 E + A+ Sbjct: 226 KELTEKLDAAITAL 239 >gi|237798051|ref|ZP_04586512.1| cystine transporter subunit [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020902|gb|EGI00959.1| cystine transporter subunit [Pseudomonas syringae pv. oryzae str. 1_6] Length = 265 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 75/245 (30%), Gaps = 10/245 (4%) Query: 2 YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S L L++ + L IK G L G+ F+ V NG GF+ Sbjct: 7 RRTFLFSALGLMLGTGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDENGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + + P AL+SK++D++ + R+ + Sbjct: 67 VEFSEALAKELGVKA---KIQPSKWDGILAALESKRLDVVINQVTISDERKKKYDFSEPY 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + I S L G + V GT E L + ++ Sbjct: 124 TISGIQALVLKKNADAIKSADDLKGKKVGVGLGTNYEQWLKEKVP----GAIVRTYDDDP 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 R D D A + V S+ A+ +G+ E Sbjct: 180 TKIQDLSVGRIDVILVDRLAALEMATKTKNK--LVPAGVAFSRQESGIAMRKGEPELQAA 237 Query: 241 VSWTH 245 + Sbjct: 238 IDKAI 242 >gi|91782144|ref|YP_557350.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|296162005|ref|ZP_06844804.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|91686098|gb|ABE29298.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] gi|295887749|gb|EFG67568.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 267 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 90/244 (36%), Gaps = 11/244 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + + ++L +L T+ + +A L +I K G LK + F V A+ +G+D+ Sbjct: 10 RRAWLAALLLSPVLAITAPAAHADTLDNIAKAGVLKVAVPEDYPPFGSVGADMKPQGYDI 69 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D L+ ++ K++ +P+N+ R LQ+ ++D++ + T RE + F Sbjct: 70 DTAALLAKSM---NVKLELVPVNSANRIPYLQTGKVDLVISSLGKTPEREKV--IDFSTA 124 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 QG +S + L+G ++ G E+ L FE Sbjct: 125 YAPYYQGVFGPADIKVSGPADLTGKTVGATRGALEEIGLTQMAP----NATIKRFEDNNA 180 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AA+ + + A+ P +I SP + + + V Sbjct: 181 TIAAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEPKFVIKNSPCFVGMNKNEPRLQQKV 238 Query: 242 SWTH 245 + Sbjct: 239 NAAI 242 >gi|78066165|ref|YP_368934.1| ABC polar amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77966910|gb|ABB08290.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 264 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 86/257 (33%), Gaps = 18/257 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +L ++ + + A +L +K+RG L+ G+ F G+ Sbjct: 1 MKIALLKKLLVAGLIGTSFAAATAHAADLLDQVKQRGTLRVGLEGTFPPFNSKNPQGELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + ++ LQ+ + D+++ T R+ + L Sbjct: 61 GFDVDIAKAVAAKLGVKAE---FVTTEWSGIIAGLQAGKFDVIANQVGITDKRKET--LD 115 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F P + I S+ L G + V GT Sbjct: 116 FSPAYTYSSAQLIQRNDDTRQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKT 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E A R DA D L L + P ++ S +P +G+ Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNP 228 Query: 236 EWYNIVSWTHYAMVTAE 252 ++ + A + A+ Sbjct: 229 KFQKAIDDAM-AQLEAD 244 >gi|222081074|ref|YP_002540437.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725753|gb|ACM28842.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 275 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 96/248 (38%), Gaps = 12/248 (4%) Query: 1 MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M I L ++ S S L I + L+CGI N + +G Sbjct: 1 MKNTILKTAMIATAFSLTLSAHSYAQSALDTIVQSKKLRCGIMLDSPPAGFRNTNNEPEG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV +C+ +++A+ +P ++ + +R AL S +ID+L +T T R +L +AF Sbjct: 61 FDVVYCKDMAAALGAEPEIVE---TPSPDRIPALVSNRIDVLIASTTPTPKR--ALTVAF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G + K GI + + LS + G+T E L A+ K + Sbjct: 116 TQPYMNNTMGVVTRKDTGIKAYADLSSKKLGGVVGSTPEQLLNKEL-ANGWKDKGATYTG 174 Query: 179 V---EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E A + + DA AL + P E VI + ++ A+ + D Sbjct: 175 YSTDAEAYLALQQGKVDAILVSFGVFNALAQSGQFP-EFVIAGEAPLSDMVSIAVRRDDQ 233 Query: 236 EWYNIVSW 243 + N Sbjct: 234 QMLNWAKM 241 >gi|295396899|ref|ZP_06807023.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Aerococcus viridans ATCC 11563] gi|294974833|gb|EFG50536.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Aerococcus viridans ATCC 11563] Length = 484 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 77/210 (36%), Gaps = 7/210 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 G++ +G+ GFD+D A++ + +++ P++ + L S Sbjct: 40 TYVIGLDDTFAPMGFRDGSGELVGFDIDLANAVADLYGWN---LEFQPIDWVMKETELNS 96 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 ID++ T RE + F GQ I K I +S L+G +I Q+G+ Sbjct: 97 GNIDMIWNGYGITPEREEM--VLFSEPYIESGQMVISKKGSDIDELSDLAGKTIATQSGS 154 Query: 155 TTELTLADYFKA--HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 T+ + ++ + + P+++ E+ A A R DA Sbjct: 155 TSLTFMQEWPDDLYNQLADEPVLYPSYNEVFADLDADRVDAIYAGDIYSRYTLNQKGTLD 214 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 E+ D S P+ + DT V Sbjct: 215 EYEYFVDETSIEPMGVGFRKSDTALKEQVD 244 >gi|290893601|ref|ZP_06556583.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL J2-071] gi|290556803|gb|EFD90335.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL J2-071] Length = 486 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 106/279 (37%), Gaps = 24/279 (8%) Query: 1 MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I+ F+ + T L I+++G L G++ + Sbjct: 1 MQKHLLQKFAAILLVFIVVFSGFTTVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV + ++ + K++ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAKKIAKDL---NVKLEIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F F Q ++ K K +SV+ SG + Q TT E + Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 174 --VGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKE-T 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQKEANKLM 269 >gi|330971844|gb|EGH71910.1| extracellular solute-binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 261 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 89/249 (35%), Gaps = 11/249 (4%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + +A+ L D+ RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + F Sbjct: 61 DIDTAQLLADKL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I ++ L G +I V G ++ L++ FE Sbjct: 116 RAYAPFYLAVFGPPDSPIKDIADLKGKTISVTRGAIEDIELSNVAPE---GATIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A ++ P + + SP+ + +G E Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVA--ISERNPKRIPAMKVKLKDSPVYVGVNKGQPELLG 230 Query: 240 IVSWTHYAM 248 V+ A Sbjct: 231 KVNEILNAA 239 >gi|330965547|gb|EGH65807.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 261 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 89/249 (35%), Gaps = 11/249 (4%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + +A+ L D+ RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + F Sbjct: 61 DIDTAQLLADRL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + ++ L G +I V G ++ L+ FE Sbjct: 116 RAYAPFYLAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A ++ P L + SP+ + +G E + Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLS 230 Query: 240 IVSWTHYAM 248 V+ A Sbjct: 231 KVNEILNAA 239 >gi|257054837|ref|YP_003132669.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Saccharomonospora viridis DSM 43017] gi|256584709|gb|ACU95842.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Saccharomonospora viridis DSM 43017] Length = 278 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 91/260 (35%), Gaps = 12/260 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKR----GFLKCGINTGLVGFAEVKANGDW 56 M + + + ++ + S + I R G L GI G AE +G+ Sbjct: 3 MRRLRCLVNVVVVSALLAACSATEAAPDSIVTRASDTGSLTIGIGVDQPGLAERTMDGNV 62 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD D R +++ + I + A ER AL S ++D++ T R+ + Sbjct: 63 VGFDADVARFVAAELGVPEGNITWKETLASEREKALASGEVDLVVAAYSVTERRQR--EV 120 Query: 117 AFRPIT-YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 +F I ++ + L+G ++C G+T+ + F + Sbjct: 121 SFAGPYLEVGQDLLIHRNSTHLTDPAALAGHTVCSPTGSTSAAHVRKRF---GDAVRLVE 177 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + RV E A A R DA D + L + P + + + + D Sbjct: 178 YPRVSECVTALLAQRVDAVATDDAILAGYVA--ENPELLRLAGHRWAVENYGIGLPKNDR 235 Query: 236 EWYNIVSWTHYAMVTAEELG 255 + V+ M+ + Sbjct: 236 DGQAAVNDAIRTMIDSGSWR 255 >gi|325956804|ref|YP_004292216.1| glutamine ABC transporter substrate-binding protein [Lactobacillus acidophilus 30SC] gi|325333369|gb|ADZ07277.1| glutamine ABC transporter substrate-binding protein [Lactobacillus acidophilus 30SC] Length = 289 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 116/300 (38%), Gaps = 43/300 (14%) Query: 1 MY-KDFF---VSILCLIILFFTS------FSTNASILG----------DIKKRGFLKCGI 40 M K+ F +S+L +I++ ++ N+ L +IK+RG+++ + Sbjct: 1 MKDKNIFNWIISVLAIILVVVSAYFGFTQKGLNSGTLASRWNSQNGVSEIKRRGYIRVAV 60 Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 L + V ++G G+DV R ++ + I+++ +NA R L S + DI+ Sbjct: 61 FGDLPPYGWVNSDGKRVGYDVYLARRMAKDLGVK---IRFVQVNANNRVDTLNSNKADIV 117 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 N T R+ + + G I K I S SQL + V GTT E Sbjct: 118 LANFTVTPERKEV--VDYAKPYMKVSVGVISPKSAPIKSASQLKNKKLIVTKGTTAENYF 175 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 + + F+ + A + R A D S LYA P V + I Sbjct: 176 T-----KQGNVNLLKFDSKTQQFNALKNGRGAALADDNSYLYAW--VKQNPKYTVGIKSI 228 Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280 K ++PA+ +G+ + IT+ N + N +++++ G D Sbjct: 229 GPKQYISPAVKKGNRSLLRWANR-----------EITKLNKESFFVEDYNKELRQYFGKD 277 >gi|325274871|ref|ZP_08140884.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] gi|324099988|gb|EGB97821.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] Length = 266 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 88/250 (35%), Gaps = 14/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + + A + D KRG L+ G++ + F G+ GF+ Sbjct: 1 MIKKYLSRLLVGVTALVAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ + AL + + D++ T R +L L F Sbjct: 61 VDILKAMAKSMGVKFEAVS---TAYDGIIPALLTGKFDMIGSGMTLTQER--NLRLNFSE 115 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K+ I S L+ + + TT E+ + Sbjct: 116 PFIVVGQTLLIRKELAGEIKSYKDLNNEKYRLTSKLGTTGEMVSKKLIGKAKYHG----Y 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +E + DA+ D + L + + PLA + +GD + Sbjct: 172 DNEQEAVMDVVNGKADAFVYDAPYNVVAVDKAGAGK-LLFLEEPFTYEPLAFGLKKGDYD 230 Query: 237 WYNIVSWTHY 246 N ++ + Sbjct: 231 SINFINNFLH 240 >gi|229593270|ref|YP_002875389.1| putative ABC transporter substrate-binding protein [Pseudomonas fluorescens SBW25] gi|229365136|emb|CAY53374.1| putative ABC transport system, substrate-binding protein [Pseudomonas fluorescens SBW25] Length = 261 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 95/274 (34%), Gaps = 14/274 (5%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + A+ L DI RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQAPAQANGLDDIVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + F Sbjct: 61 DIDTAKLLADQL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPEREKV--IDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ISSV L G +I V G ++ L + FE Sbjct: 116 KAYAPFYLAVFGPPDAAISSVDDLKGKTISVTRGAIEDIELTAVAPK---EATIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A ++ P L + SP+ + + + Sbjct: 173 NSTIAAYLAGQVDLIASGNVVMVA--ISERNPKRVPALKVKLKDSPVYVGVNKNEPALLE 230 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 V+ A L KN Q K+ D+ Sbjct: 231 KVNQILVAAKADGSLE---KNAMQWLKEPLPADL 261 >gi|269120726|ref|YP_003308903.1| extracellular solute-binding protein family 3 [Sebaldella termitidis ATCC 33386] gi|268614604|gb|ACZ08972.1| extracellular solute-binding protein family 3 [Sebaldella termitidis ATCC 33386] Length = 265 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 80/229 (34%), Gaps = 16/229 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G++ G+ GFD+D +A++ + + +Q+ P+N + + L++ Sbjct: 37 KIIVGLDDTFAPMGFRDEKGELVGFDIDLAKAVAEKLGIE---VQFQPINWDSKEMELKN 93 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 I+++ T R+ L F + Q ++ K I + L G I Q+ + Sbjct: 94 GNINLIWNGLSITEERKK--QLLFSVPYLENSQIILVKKDSLIKTKEDLKGKIIGTQSKS 151 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + E + ++ ++ ++ A R +A GD +K ++ Sbjct: 152 SGEDAVLAD-PVNSELKELRTYDTYDQAFLDLDAGRIEAIAGDEVLARFIKANKEKKEGK 210 Query: 215 VIL----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 + K + DT ++ T EEL Sbjct: 211 ELYTILEGSDFGKEEYGIGAKKEDTYLIEKINETI------EELKKDGT 253 >gi|308174188|ref|YP_003920893.1| high affinity arginine ABC transporter ATP-binding protein [Bacillus amyloliquefaciens DSM 7] gi|307607052|emb|CBI43423.1| high affinity arginine ABC transporter (ATP-binding protein) [Bacillus amyloliquefaciens DSM 7] gi|328554132|gb|AEB24624.1| high affinity arginine ABC transporter (ATP-binding protein) [Bacillus amyloliquefaciens TA208] gi|328912523|gb|AEB64119.1| high affinity arginine ABC transporter (ATP-binding protein) [Bacillus amyloliquefaciens LL3] Length = 255 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 86/255 (33%), Gaps = 11/255 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V + I ++ + S K L G + F + GFD Sbjct: 1 MKKWLLVLVAACITFALSACGSGNSGSEGGKN--KLIMGTSADYKPFEYKDGD-QIVGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL D ++ ++ AL+SKQ+D++ T R+ + F Sbjct: 58 VDLAKALGKKTGYD---VEVQDMDFNSLITALKSKQVDMILSGMTPTPERKK--QVDFSG 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y + K I S+ L G ++ VQ G+ E + + R+ Sbjct: 113 IYYTANNMIVTKKGSSIKSLDDLKGKTVGVQLGSIQEEKGKKLASKYGFQLEDR--NRIS 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ ++ R DA + +N+ +S A A + D++ Sbjct: 171 DLTEEIKSGRFDAAIIEDIVAQGYFSSNNDLQGFASADAKSDESGSAIAFRK-DSDLTAK 229 Query: 241 VSWTHYAMVTAEELG 255 + M E+ Sbjct: 230 FNKALKEMEKNGEIE 244 >gi|28872357|ref|NP_794976.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213971836|ref|ZP_03399938.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|301383373|ref|ZP_07231791.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302064066|ref|ZP_07255607.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato K40] gi|302134966|ref|ZP_07260956.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28855612|gb|AAO58671.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213923382|gb|EEB56975.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|331017859|gb|EGH97915.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 261 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 89/249 (35%), Gaps = 11/249 (4%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + +A+ L D+ RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + F Sbjct: 61 DIDTAQLLADRL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + ++ L G +I V G ++ L+ FE Sbjct: 116 RAYAPFYLAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A ++ P L + SP+ + +G E + Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVA--ISERNPKRIPALKVKLKDSPVYVGLNKGQPELLS 230 Query: 240 IVSWTHYAM 248 V+ A Sbjct: 231 KVNEILNAA 239 >gi|205372794|ref|ZP_03225604.1| amino acid ABC transporter (amino acid-binding protein) [Bacillus coahuilensis m4-4] Length = 269 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 40/263 (15%), Positives = 86/263 (32%), Gaps = 25/263 (9%) Query: 1 MYKDFFVSILCLIILFFTSFS-----------TNAS-IL-GDIKKRGFLKCGINTGLVGF 47 M K +L L +F + +NA L ++ + G L G F Sbjct: 1 MKKWTLYLVLALTTIFIAACGTNETAEEETTGSNADMTLYDEVMENGELLIGTEGTYPPF 60 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 +G+ GFDV+ + ++S + + +++ F L S++ D+++ Sbjct: 61 TFHDESGELTGFDVEIAKEVASRLGVEA---KFMETQWDAMFEGLNSERFDVIANQVGI- 116 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 + F + K+ I++ ++ G Q+ T+ +A+ + A Sbjct: 117 -RDDRKETYDFSNPYIVSSAVLVTSKESDITTFEEIDGLKSA-QSLTSNYKDIAESYGA- 173 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + E + + R D D A+ N+ + + Sbjct: 174 ----EIVGVEGLAQAIQNLENGRVDVTVNDKIAILDYFKQNENAGVKIAATAEEASES-G 228 Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250 +G+ E V+ M+ Sbjct: 229 FMFRKGNEELVEAVNKALEEMIE 251 >gi|77458291|ref|YP_347796.1| lysine-arginine-ornithine-binding periplasmic protein [Pseudomonas fluorescens Pf0-1] gi|77382294|gb|ABA73807.1| L-arginine-binding protein / L-ornithine-binding protein [Pseudomonas fluorescens Pf0-1] Length = 259 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 88/265 (33%), Gaps = 22/265 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L +L T+ + +A ++ GI G F+ +G GFD Sbjct: 1 MKKLVMFGALALSMLSLTAVAEDA---------KPIRIGIEAGYPPFSMKTPDGKLAGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + K ++ AL+ K+ID + + T R+ + F Sbjct: 52 VDIGDALCEQM---KVKCTWVEQEFDGLIPALKVKKIDAILSSMTITDDRKK--NVDFTI 106 Query: 121 ITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y F+M G+ ++L G + V +T + + + + + Sbjct: 107 KYYHTPARFVMKAGSGVKDPLTELKGKKVGVLRASTHDRYATEVLVPAGI--ELVRYGSQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +E + + R DA D L L D + + A+ +GD Sbjct: 165 QEANLDMVSGRIDAMLADSVNLSDGFLKTDAGKGFEFVGPTYEDAKYFGGGAGIAVRKGD 224 Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259 TE + + + Q Sbjct: 225 TELAEKFNTAINEIRANGKYKQVQD 249 >gi|332180727|gb|AEE16415.1| ABC-type transporter, periplasmic subunit family 3 [Treponema brennaborense DSM 12168] Length = 269 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 89/286 (31%), Gaps = 29/286 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K C +I L ++K RG G++ + D Sbjct: 1 MKKMLAAVCACALIAGTVFAGGKKDSGVDNSLEELKTRGVFVLGLDDSFPPLGFRNESND 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+D+D + + ++ P++ + L + ID + T RE Sbjct: 61 IAGYDIDLAAEVCRRLG---VTLKCQPIDWAAKEQELNTGNIDCIWNGFTMTPERE--QA 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 L+F + Q I+ GI +++ L+G SI +QAG++ + + + Sbjct: 116 LSFSKPYLDNAQVVIVRGNSGIKTLADLAGKSIGLQAGSSAADAVEAAPEFKKSVKEIVE 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + + V+L + +S + D Sbjct: 176 FKDNLTALMDLEIK--GVDGVVMDMVVGNYSIKTSGKNFVVLDEHLSSEKYGIGFRKRDV 233 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGID 280 + + V Q++ D T + Q++ G D Sbjct: 234 KLRDEVQSVL----------------EQMAADGTVAAISQKWFGAD 263 >gi|163789715|ref|ZP_02184152.1| extracellular solute-binding protein, family 3 [Carnobacterium sp. AT7] gi|159874937|gb|EDP69004.1| extracellular solute-binding protein, family 3 [Carnobacterium sp. AT7] Length = 274 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 96/262 (36%), Gaps = 19/262 (7%) Query: 2 YKDFFVSILCLIILFFTSFS----------TNASILGDIKKRGFLKCGINTGLVGFAEVK 51 K + ++ + ++ LF ++ + +L ++ G LK G+ + + Sbjct: 3 KKKWMLAGIAVVALFVSACGTSTKEDATSTADGDLLKSVQDAGVLKVGVMGTYQPYNFIN 62 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + D GFD D + ++ + D I+++ LQ+ + D+++ T R+ Sbjct: 63 EDKDMDGFDADIAKEIAKGLDVD---IEFVSQEFSGMIAGLQTGKFDMVASQMTITDDRK 119 Query: 112 ISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + F + + + I+SV G I V GT E L + + Sbjct: 120 KEM--LFSDPYITNQVKVIVKDDNTEITSVEDFVGKDIGVGLGTNDETYLRNELMPEVGE 177 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 ++ ++ V + R DA ++ AL + + + + I A+ Sbjct: 178 FNIRTYDDVITSLKDLDSGRIDATINNMYALKPII--EANGLKIKAVGEPIKSDQAGIAV 235 Query: 231 IQGDTEWYNIVSWTHYAMVTAE 252 G+ + V+ A + A+ Sbjct: 236 QLGNEAFIEEVNTIL-ADIKAD 256 >gi|153869943|ref|ZP_01999447.1| Lysine-arginine-ornithine-binding periplasmic protein [Beggiatoa sp. PS] gi|152073594|gb|EDN70556.1| Lysine-arginine-ornithine-binding periplasmic protein [Beggiatoa sp. PS] Length = 224 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 74/204 (36%), Positives = 114/204 (55%), Gaps = 5/204 (2%) Query: 27 LGDIKKRGFLKCGINTGLVG----FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + I+KR L CG+ + + G F + G GFDVDFCRA+++AI ++P+ + + Sbjct: 1 MDTIEKRTVLVCGVGSDVNGLKGGFTFINEKGQVAGFDVDFCRAVAAAILNNPNALSPVL 60 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + +R L +D+L+ T WT RE + G F IT++DGQGFI+ K I+++ Q Sbjct: 61 VRQSDRPGTLAPGNVDLLTATTTWTSTREANWG-NFTWITFYDGQGFIVKKDTSITTLEQ 119 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G +ICV GTTT L + F ++ + + F E AAY +C AYT D S L Sbjct: 120 LEGKNICVVEGTTTLANLKEVFAQRSISFTLLTFPEATEEFAAYEQEQCTAYTSDRSTLA 179 Query: 203 ALKLTNDRPSEHVILPDIISKSPL 226 + +++ P HV + + ISK+PL Sbjct: 180 SWIFSSNTPDAHVFIDETISKNPL 203 >gi|242238356|ref|YP_002986537.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] gi|242130413|gb|ACS84715.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] Length = 254 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 89/237 (37%), Gaps = 10/237 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + +L + S A L DI++RG L+ + F V + +G+D+D R L+ Sbjct: 1 MAGAALLIMQAGSAMADQLQDIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDVARYLA 60 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + K+Q +P+ + R LQ+ ++D++ + RE + F G Sbjct: 61 GEM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKV--IDFSRAYAPFFLG 115 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 K+ +SS L G ++ V G ++ L D +E +AY + Sbjct: 116 VFGPKEGDVSSPDALQGKTVGVTRGAVEDMVLTDIAPK---TADVKRYEDNNTTLSAYLS 172 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + A+ P++ + ++ SP + + + V+ Sbjct: 173 GQVQYIATGNLVVAAIA--EKNPTKAPVAKFMLKDSPCFIGLKKDEPALKAKVNALI 227 >gi|182435043|ref|YP_001822762.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326775559|ref|ZP_08234824.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces cf. griseus XylebKG-1] gi|178463559|dbj|BAG18079.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326655892|gb|EGE40738.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces cf. griseus XylebKG-1] Length = 309 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 47/228 (20%), Positives = 89/228 (39%), Gaps = 10/228 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + KKRG+L G E +G + GFD++ R +++++ +P I++ Sbjct: 57 ESRTWTKAKKRGYLVVGAKEDQPYLGEKDPASGIYSGFDIEIARMMAASLGFEPKTIRFR 116 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + + R ALQ+ QID +R+ +G F Y GQG ++ I Sbjct: 117 TIASANRETALQNGQIDYYVGTYTINDMRKKLVG--FAGPYYMAGQGLLVRTDENDIHGP 174 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G ++C AG+T +A + + ++ ++ DA T D + Sbjct: 175 QDLAGKTVCSAAGSTPYQRIAADYPKA----TLVAYDTYSICVDNLLTYQVDAVTTDDAI 230 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 L P E ++ S+ P + + D + ++ A Sbjct: 231 LLGFAAKA--PDEMKVVGKPFSQEPYGIGVPRDDNALRDALNDALEAN 276 >gi|260219978|emb|CBA27056.1| hypothetical protein Csp_A00370 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 282 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 38/243 (15%), Positives = 84/243 (34%), Gaps = 6/243 (2%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI--- 71 + + +L + G L + F+ V A+ G+ V+ C L+ A+ Sbjct: 1 MVGHGPAAATGVLERVSSGGKLVIAHRESSIPFSYVDADKKPVGYAVELCLKLADAVRKK 60 Query: 72 -FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 ++++L + R + + D+ +T R +AF + G + Sbjct: 61 TGAKNMQVEFLQVTPANRIAMVAEGKADLECGSTTNNAER--RQKVAFTIPHFITGARML 118 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + I + L G + GTT + ++ + + Sbjct: 119 VRADSKIERIEDLEGKKLVSTKGTTPLKAAEQANRERLLRITILEAPDHAKAVDMVEKSE 178 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 DA+ D LY L +P ++ ++ PLA + + D E+ ++ ++ Sbjct: 179 ADAFVMDDVLLYGLASNRPKPESLRVVGKFLTTEPLAIMLPKDDPEFKKLIDEEMRRLIV 238 Query: 251 AEE 253 ++E Sbjct: 239 SKE 241 >gi|154686659|ref|YP_001421820.1| YqiX [Bacillus amyloliquefaciens FZB42] gi|154352510|gb|ABS74589.1| YqiX [Bacillus amyloliquefaciens FZB42] Length = 255 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 85/255 (33%), Gaps = 11/255 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V I ++ + S K L G + F + GFD Sbjct: 1 MKKWLLVLAAACITFALSACGSGNSGSEGGKN--KLIMGTSADYKPFEYKDGD-QITGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL D ++ ++ AL+SKQ+D++ T R+ + F Sbjct: 58 VDLAKALGKKTGYD---VEVQDMDFNSLITALKSKQVDMILSGMTPTPERKK--QVDFSD 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y + K + S++ L G ++ VQ G+ E + + R+ Sbjct: 113 IYYTANNMIVTKKGSSMKSLNDLKGKTVGVQLGSIQEEKGKKLASKYGFQLEDR--NRIS 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ ++ R DA + +N +S A A + D++ Sbjct: 171 DLTEEIKSGRFDAAIIEDIVAQGYFSSNQDLQGFASADAKSDESGSAIAFRK-DSDLTAK 229 Query: 241 VSWTHYAMVTAEELG 255 + M E+ Sbjct: 230 FNKALKEMEKNGEIE 244 >gi|227513106|ref|ZP_03943155.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus buchneri ATCC 11577] gi|227083681|gb|EEI18993.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus buchneri ATCC 11577] Length = 283 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 84/256 (32%), Gaps = 16/256 (6%) Query: 2 YKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 K V + L+++ + TN + K+ + G++ V + Sbjct: 6 KKCPLVIVTLLLMVVLSGCRFESRQKMETNPDTWSIVSKQKKIVIGLDDSFVPMGFETKS 65 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G G+DVD +A+ K+ + P++ L++ ID++ R Sbjct: 66 GKIVGYDVDLAKAVFKQYG---IKVDFQPIDWSMNVTELRNGTIDLIWNGFSMNPQRAK- 121 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH- 172 + F + Q I KK I+S + + VQAG+ + + K + Sbjct: 122 -KVTFSEPYLVNKQVLISKKKNHINSFADMKNRVAGVQAGSAGAMDIDSQPKLLKDRIKN 180 Query: 173 --PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 PI+++ E + R D + + +P K + Sbjct: 181 HTPILYDSFTEAFIDLNSDRIQGLLIDSIYAGYYIGHQKDRATYQSVPSQFPKEYYGVGM 240 Query: 231 IQGDTEWYNIVSWTHY 246 +GDT+ + Sbjct: 241 RKGDTKLKQKIDAGLN 256 >gi|15890315|ref|NP_355987.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15158518|gb|AAK88772.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 268 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 44/238 (18%), Positives = 81/238 (34%), Gaps = 17/238 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V+ L+ F+ A L DI G L+C + + GFD Sbjct: 1 MKKSVIVA--GLLAATFSLTPAKADKLDDIISSGTLRCAVVLDFPPMGARDDANNPVGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C L+ + ++ ER AL S ++D+ +T TL R ++G+ Sbjct: 59 VDYCNDLAKVLGVTAEIVE---TPFPERIPALMSGRVDVGVASTSDTLERAKTVGM--TV 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + K GI S + G ++ AGT + L K + ++ Sbjct: 114 PYFAFEMAVTANDKSGIKSFEDMKGKTVGATAGTFEAIALEKTVKEWGVG-EFRPYQTQA 172 Query: 181 EIDAAYRAHRCDAYTGDISA---------LYALKLTNDRPSEHVILPDIISKSPLAPA 229 ++ A + DA + + + P + + ++ Sbjct: 173 DVFLALSQGQIDATVSTSTVAQSTVKSGKFAGVSVVGKAPYDIDYVSLFTNRDEYGFI 230 >gi|227529073|ref|ZP_03959122.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus vaginalis ATCC 49540] gi|227351085|gb|EEJ41376.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus vaginalis ATCC 49540] Length = 289 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 91/256 (35%), Gaps = 17/256 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNA---------SILGDIKKRGFLKCGINTGLVGFAEVKA 52 + + + +L + +A IKK G L G++ V + Sbjct: 7 IRALITLAIMIALLPISGCKKSANPNYRANHVDQWSRIKKSGQLNIGVDDSFVPMDFRQK 66 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 NG G+DVD RA+ + + ++ + L++ ID++ T R+ Sbjct: 67 NGKLVGYDVDLSRAVCKVLGLKA---NFQSIDWSMKETELKNGTIDVIWNGYTATPERQK 123 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK--AHNMK 170 AF + GQ ++ K GI+S + G + +Q G+T Y + + Sbjct: 124 --KEAFSRVYERSGQSLVVKKNSGINSFKDMQGKKLGLQEGSTAFTDFNKYPQLLKRYIS 181 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPA 229 PI+++ +A R + +++ ++ + + +A Sbjct: 182 GSPIIYQDNNSAFMDLKAGRTQGVLAGTIYAGYYAKNLAKTNQYKLIGSNVFPQDRVAVG 241 Query: 230 IIQGDTEWYNIVSWTH 245 + +GD +++ Sbjct: 242 MRKGDRTLVKKINYAL 257 >gi|238798559|ref|ZP_04642036.1| Cystine-binding periplasmic protein [Yersinia mollaretii ATCC 43969] gi|238717579|gb|EEQ09418.1| Cystine-binding periplasmic protein [Yersinia mollaretii ATCC 43969] Length = 272 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 82/248 (33%), Gaps = 15/248 (6%) Query: 2 YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + ++ + + + A +L +K+RG L G+ F+ +G GF Sbjct: 13 RRRVVLGMVAVALATGLNVKSYAAADLLNQVKERGTLIVGLEGTYPPFSFQGEDGKLTGF 72 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VDF AL+ + + P +L+SK+ID+ + R+ F Sbjct: 73 EVDFANALAEHMGIKA---KITPTKWDGMLASLESKRIDVAINQVTISDERKK--KYDFS 127 Query: 120 PITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G + K S L G + V G+ E L + K ++ Sbjct: 128 TPYTVSGIQVLTKKGNEGNFSKPEDLEGKKVGVGLGSNYEQWLRENLK----GVDIRTYD 183 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R R DA D L AL L + ++ A+ + + E Sbjct: 184 DDPTKYQDLRVGRTDAILVDR--LAALDLVKKTNGTLAVAGPAFARQESGVALRKDNPEL 241 Query: 238 YNIVSWTH 245 ++ Sbjct: 242 LAAINQAI 249 >gi|239813330|ref|YP_002942240.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239799907|gb|ACS16974.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 301 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 52/231 (22%), Positives = 90/231 (38%), Gaps = 4/231 (1%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L I+ G G+ A + AN + G+ V+ C + I +K++Y+ + Sbjct: 31 TLDKIRSSGKAVLGVREASPPMAYMLGANEKYVGYHVELCERVLKDI-APQAKLEYMAVT 89 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 A+ +Q+ +DI T R +AF TY GISS+ QL+ Sbjct: 90 AQNTIPLVQNGTLDIGCGPTTNNTAR--QQQVAFALTTYVSEVRMATRVDSGISSLDQLA 147 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G ++ GTT L +A N ++ + E + R DA+ D + L + Sbjct: 148 GRTVSASTGTTAVQLLRKRERAQNTTITTMLGKDHLESFLLMESGRADAFVLDDNLLAGI 207 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 PS + I+ D + P+A + D + V ++ + EL Sbjct: 208 IANAKNPSAYRIVGDALGSEPIALLFRKDDAIFKAAVDDALRRLMKSGELE 258 >gi|119963084|ref|YP_948498.1| glutamate-binding protein precursor [Arthrobacter aurescens TC1] gi|119949943|gb|ABM08854.1| Glutamate-binding protein precursor [Arthrobacter aurescens TC1] Length = 291 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 87/234 (37%), Gaps = 9/234 (3%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 ++ + + + K +K G F + +G GFDV+ +A+++ + Sbjct: 36 VASASFEAGTTMEKLNKAQTIKIGTKFDQPLFGQKGLDGKPVGFDVEMGKAIAAKLGIPA 95 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 KI+++ ++ R ++ ++D++ R+ +AF Y GQ +++K Sbjct: 96 DKIEWVETVSQNRESFIEQGRVDLVIATYTINDARKE--KVAFAGPYYEAGQALLVNKDD 153 Query: 136 G-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+ +SG +C G+T T+A+ + A + R + A Sbjct: 154 TSITKPEDVSGKKVCSVTGSTPAKTIAEKYGA-----EVVPAATYTACLEPLRNKQVVAV 208 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 T D L + + +K P + + DT + N ++ Sbjct: 209 TTDNVILAGYVDKEPDA-FKLASDETFTKEPYGIGLKKDDTVFRNWINDQLEGF 261 >gi|330901940|gb|EGH33281.1| extracellular solute-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 132 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 57/130 (43%), Positives = 81/130 (62%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + L IKK+GF++CG++ GL GF+ + G G D Sbjct: 3 MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D CRA+++A+F D +K+++ LNAKERF ALQS +IDILSRNT WT R+ +GL F Sbjct: 63 ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122 Query: 121 ITYFDGQGFI 130 +TY+DG GF+ Sbjct: 123 VTYYDGIGFL 132 >gi|309805517|ref|ZP_07699562.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LactinV 09V1-c] gi|312871455|ref|ZP_07731549.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LEAF 3008A-a] gi|312874443|ref|ZP_07734473.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LEAF 2052A-d] gi|312874522|ref|ZP_07734547.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LEAF 2053A-b] gi|325911806|ref|ZP_08174210.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners UPII 143-D] gi|329920213|ref|ZP_08277025.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners SPIN 1401G] gi|308165168|gb|EFO67406.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LactinV 09V1-c] gi|311089913|gb|EFQ48332.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LEAF 2053A-b] gi|311090055|gb|EFQ48469.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LEAF 2052A-d] gi|311092975|gb|EFQ51325.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LEAF 3008A-a] gi|325476312|gb|EGC79474.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners UPII 143-D] gi|328936434|gb|EGG32880.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners SPIN 1401G] Length = 273 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 83/234 (35%), Gaps = 10/234 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74 + ++ +K+ + G F + + GF++D +A++ + Sbjct: 21 GGCGQAKKVNVYQKVKQSRTMIWGTRADTRLFGYMDIKSSKIIGFEIDMAKAVTKQMLGK 80 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + +++ K R L+++ I+ + T R+ + F G ++ Sbjct: 81 DAVAKFVQTTPKTRIPLLKNRNINAIWATMTITPERKK--QVDFARPYIGAGASLLVPNN 138 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I V QL+ + GTT + + ++ + +A +A + A Sbjct: 139 SKIKDVHQLNNKKVLAVKGTTAVADIKKVAPKAK----VLEYDDYGQAFSALKAGQGVAL 194 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 T D L + + P H ++ + P A+ +G E + ++ A+ Sbjct: 195 TTDNCLLAGIAS--ENPGFH-LIGKNYTNQPYGIAVDKGQDELRDHINKALLAL 245 >gi|312870437|ref|ZP_07730557.1| ABC transporter, substrate-binding protein, family 3 [Lactobacillus oris PB013-T2-3] gi|311093994|gb|EFQ52318.1| ABC transporter, substrate-binding protein, family 3 [Lactobacillus oris PB013-T2-3] Length = 282 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 79/234 (33%), Gaps = 9/234 (3%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 T+ + I++R + G++ V + NG G+DVD +A+ Sbjct: 25 SVTTRANTQDTWSRIERRKKVVIGLDDSFVPMGFREKNGKLVGYDVDLAKAVFKQYG--- 81 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K+ + ++ + L++ ID+L RE +AF + Q + K Sbjct: 82 IKVDFQTIDWSMKETELKNGTIDLLWNGYSMNPSREK--KVAFSRPYLDNRQVLVTKKSS 139 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH---PIVFERVEEIDAAYRAHRCD 192 I +S ++G S+ VQ G+T L K K ++++ + A+R Sbjct: 140 HIDGLSGMAGKSLGVQNGSTGAAVLDAKPKLLKDKIKNKSAVLYDTFPDAFIDLNANRIQ 199 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIVSWTH 245 D + + + + +GD ++ Sbjct: 200 GILMDQVYADYYVDHQKDKNAYQVYESKQLPAEYFGVGMRKGDKTLRKKINQGL 253 >gi|312863404|ref|ZP_07723642.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus vestibularis F0396] gi|311100940|gb|EFQ59145.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus vestibularis F0396] Length = 270 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 36/253 (14%), Positives = 81/253 (32%), Gaps = 17/253 (6%) Query: 1 MY--KDFFVSILCLIILF-FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANG 54 M K + + L + S++ L ++ +G L +N F Sbjct: 1 MKTWKKLLLGFAGIFALMTLAACSSSKDTLEKVQDKGTLTVALNPYFAPFEFKTIQDGKD 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D++ +A+ + +++ ++ ++QS + DI T R+ Sbjct: 61 TIAGADIEIAKAIGDELGVK---VKFSEMSFDNVLASVQSGKADIAISGISATKERQKI- 116 Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y ++ K + S+ VQ G+ E K++ + Sbjct: 117 -FDFSDTYYESETVLVVKKDATGTYKQTGDFAKKSVAVQKGSIQESI----AKSNLSDAN 171 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + + E ++ + + + + N+ + I SK A A+ + Sbjct: 172 VVSLAQPGEAINELKSGQVEGVVLEKAIAQGYIEQNNDLAVSDIALKSDSKDAYAVAMPK 231 Query: 233 GDTEWYNIVSWTH 245 G + V+ Sbjct: 232 GSDKLKAKVNKVI 244 >gi|254252492|ref|ZP_04945810.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] gi|124895101|gb|EAY68981.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] Length = 264 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 84/251 (33%), Gaps = 17/251 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +L ++ + + A +L +K+RG L+ G+ F GD Sbjct: 1 MKFSLLKKLLVAGVIGTSFAAATAHAADLLDQVKQRGTLRIGLEGTFPPFNSKSPQGDLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + +P ++ LQ+ + D++ T R+ + L Sbjct: 61 GFDVDIAKAVAAKLGVNPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDKRKET--LD 115 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F P + I K S+ L G + V GT Sbjct: 116 FSPAYTYSSAQLIQRKDDTREFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVKT 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E A R DA D L L + P ++ S +P +G+ Sbjct: 171 YPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNSQLP--LRPGANVGSANPSGIPFKKGNP 228 Query: 236 EWYNIVSWTHY 246 ++ + Sbjct: 229 KFQKAIDDAMT 239 >gi|170699904|ref|ZP_02890933.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170135168|gb|EDT03467.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 257 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 90/252 (35%), Gaps = 17/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +S L + T+ + + L + V G GFD Sbjct: 1 MKLKTLLSAASLGMALLTAIAPGT---AFAQDSNVLNVATDATFPPMEFVD-KGQRTGFD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL+ A+ ++Q+ ++ K L +++ D T R + + F Sbjct: 57 IDIMNALAKAMGK---QVQWTDIDFKGLIPGLVARRFDAAISGIYITPER--AQVVDFTQ 111 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + G ++ I +++ L+G + VQ GT + L D + + + E+ + Sbjct: 112 SYFAGGLSALVKADSPIKTLADLNGKKVSVQVGTKSVNFLRD----NYPQVQRVEVEKNQ 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E+ R DA A Y T +L ++ A+ + +++ + Sbjct: 168 EMFDLVGIGRADAAVTGKPAAYQFVRTRPG---FRVLDKELTTEAYGIAVRKDESQLRDQ 224 Query: 241 VSWTHYAMVTAE 252 ++ A + A+ Sbjct: 225 MNAAL-AKIKAD 235 >gi|330446640|ref|ZP_08310292.1| lysine-arginine-ornithine-binding periplasmic family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490831|dbj|GAA04789.1| lysine-arginine-ornithine-binding periplasmic family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 258 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 87/254 (34%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +I + + A K+ ++ GI F+ + +G+ KGFD Sbjct: 1 MKKWIL---AAALISAMGASAVQA------KEWKEVRFGIEGAYPPFSWTEPSGELKGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + K + + + +L +++ D + T R+ + F Sbjct: 52 VDMANALCAQM---QVKCKIVAQDWDGIIPSLLARKYDAIIAAMSITEERKK--KIDFTG 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F+ K + + L G I VQ TT + L D F + + Sbjct: 107 KYALIPNKFVAKKGTDLDFTKEGLKGVKIGVQRATTHDKYLTDNF---GDSVEIVRYGSF 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 ++ +A R + GD SAL L D + ++ A+ + D Sbjct: 164 DDAYLDLKAGRIVSVLGDASALEEGLLNKDGGDGFEFIGPSLTDPKWFGEGFGIAVRKQD 223 Query: 235 TEWYNIVSWTHYAM 248 + + A+ Sbjct: 224 KDLTKKLDEAILAL 237 >gi|229542367|ref|ZP_04431427.1| extracellular solute-binding protein family 3 [Bacillus coagulans 36D1] gi|229326787|gb|EEN92462.1| extracellular solute-binding protein family 3 [Bacillus coagulans 36D1] Length = 280 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 22/252 (8%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 IKK G +K + L + V NG +G+DV + ++ + ++++ +NA R Sbjct: 41 AIKKNGTIKIAVFGDLPPYGWVDKNGGRQGYDVALAKQVAKDLGVK---VKFVQVNANSR 97 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 AL+S ++D++ N T R+ + F G + KK I++VSQL G S+ Sbjct: 98 VDALKSNKVDLVLANFTITPERK--QVVDFAKPYMKVSIGVVSPKKNPITNVSQLKGKSL 155 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 V GTT E +YF + ++ E A + R A D S LYA Sbjct: 156 IVNKGTTAE----NYFTSKQKDVKLQKYDSKTEQFNALKNGRAVALADDNSYLYAW--VK 209 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + P V + + +APA+ +G+ N ++ IT+ N N K+ Sbjct: 210 NHPDYTVGIKTLGPNQYIAPAVKKGNKSLLNWMNK-----------EITKLNNNGFFKND 258 Query: 269 TNPDVQRFLGID 280 N ++ + G D Sbjct: 259 YNNNLAPYFGSD 270 >gi|331007421|ref|ZP_08330602.1| putative binding protein component of ABC transporter [gamma proteobacterium IMCC1989] gi|330418771|gb|EGG93256.1| putative binding protein component of ABC transporter [gamma proteobacterium IMCC1989] Length = 274 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 89/249 (35%), Gaps = 8/249 (3%) Query: 1 MYKDFFV-SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M +FF ++L S + A L D+ +G ++CG+ +N + G Sbjct: 1 MKSNFFKKALLAASFGLLASGNVAADKLDDVLSKGKVRCGVVLDFPPMGFRDSNNNPVGM 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C L+ A+ + + L ER +L S ++D+ ++ TL R ++G F Sbjct: 61 DVDMCADLAKAMNIEYEIVG---LTWAERIPSLISGKVDVAIASSSDTLERAQTVG--FT 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH--NMKYHPIVFE 177 ++ K +S L ++ GTT E Y K + K F+ Sbjct: 116 IPYMVFQFQALLSDKSEAASWEDLKDLNVGSAVGTTYESEFLKYKKENWEGAKGKYSSFQ 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E A + +A +A + + + + ++ + W Sbjct: 176 SENESFLAVSQGQVNAVIVTDTAAANVISSGKFKGVKLGPVAPFGADIVGMMTLRKEFGW 235 Query: 238 YNIVSWTHY 246 N ++ Sbjct: 236 INYLNLYIN 244 >gi|320159830|ref|YP_004173054.1| amino acid ABC transporter substrate binding protein precursor [Anaerolinea thermophila UNI-1] gi|319993683|dbj|BAJ62454.1| amino acid ABC transporter substrate binding protein precursor [Anaerolinea thermophila UNI-1] Length = 251 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 81/254 (31%), Gaps = 22/254 (8%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WK 57 M + ++L + ++F S ++ ++ + F V N Sbjct: 1 MKRFSVILWAMLIMALVFSACTPAQPS------EKTKVRVATDATFPPFEMVDENTKQLT 54 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDV+ A++ + ++++ + + Q D+ T R+ + Sbjct: 55 GFDVELMNAIAQKAGFE---VEWINVGFDPMLAGIAECQYDMAIAAITITEERKA--SMD 109 Query: 118 FRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F GQ + K+ IS + L G I Q GTT + A + Sbjct: 110 FSDPYINAGQIVTVRKETTDISGKNDLKGKKIGAQLGTTGAIEAEKIEGA-----EVKTY 164 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + ++ + DA D A T P + + ++ + A + + Sbjct: 165 DSYDQAFLDLANGQIDAVIADYPTTLAFLAT--NPDKLKTVGEVFTDENYGVAFCKKKAD 222 Query: 237 WYNIVSWTHYAMVT 250 V+ A+ Sbjct: 223 LIPQVNAAIKALKE 236 >gi|300693657|ref|YP_003749630.1| amino-acid-binding periplasmic ABC transporter protein [Ralstonia solanacearum PSI07] gi|299075694|emb|CBJ34991.1| putative amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum PSI07] Length = 280 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 93/249 (37%), Gaps = 13/249 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRAL 67 + L L S A +I+K L+CG + FA + GFDVD C+AL Sbjct: 10 LTVLACLCAASLPALADQWAEIQKNKELRCGTFADVPPFAAPDPKTREMVGFDVDMCQAL 69 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + + PL+ + R ++ ++D+ N +TL R + F Y + Sbjct: 70 AKRLG---VAAKITPLSVEARVPEVKMGRVDVTVANLAYTLGRAEQIQ--FSDPYYLAKE 124 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + +S + G + G+T+EL++ P+ F+ A + Sbjct: 125 MLAVKASDPGTSKADYKGKRLAAAKGSTSELSI------KMNGSEPVTFQDTGSAYMAVQ 178 Query: 188 AHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + L + E ++ + + P+ + +G+ + V+ Sbjct: 179 QGKALGIVSNTMTITKLVNQSKSGGIELKMIAEPMIYQPIGVGMKKGEPQLLAKVNEALL 238 Query: 247 AMVTAEELG 255 AM A E+ Sbjct: 239 AMDKAGEIN 247 >gi|255030491|ref|ZP_05302442.1| hypothetical protein LmonL_17866 [Listeria monocytogenes LO28] Length = 278 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 104/279 (37%), Gaps = 24/279 (8%) Query: 1 MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I+ F+ + T L I+++G L G++ + Sbjct: 1 MQKHLLQKFAAILLVFIVVFSGFTSVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F F Q ++ K K +SV+ SG + Q TT E + Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 174 --VGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFSNGSKE-T 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKEYQKEANKLM 269 >gi|194468314|ref|ZP_03074300.1| extracellular solute-binding protein family 3 [Lactobacillus reuteri 100-23] gi|194453167|gb|EDX42065.1| extracellular solute-binding protein family 3 [Lactobacillus reuteri 100-23] Length = 283 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 85/239 (35%), Gaps = 9/239 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + I++R + G++ V + NG G+DVD RA+ K+ + Sbjct: 30 ADTQDTWNRIERRKRVIVGLDDSFVPMGFRQKNGKLVGYDVDLARAVFKQYG---IKVDF 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P++ + L++ ID+L R +AF + Q + KK I ++ Sbjct: 87 QPIDWSMKETELKNGTIDLLWNGYSVNPSRAK--KVAFSRYYLENRQILVTKKKSNIKNL 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYH---PIVFERVEEIDAAYRAHRCDAYTGD 197 + ++G ++ VQ G+T L + K K P++++ A+R D Sbjct: 145 NGMTGKTLGVQNGSTGVTVLDEKPKLLKDKIKNHTPVLYDTFPNAFIDLNANRIQGILMD 204 Query: 198 ISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + + + A + +GD ++ + EL Sbjct: 205 EVYANYYIKHQPNSNSYRTYISKELPMEHFAVGMRKGDKTLKKKINQGLGNLQKNGELR 263 >gi|16804289|ref|NP_465774.1| hypothetical protein lmo2250 [Listeria monocytogenes EGD-e] gi|224500950|ref|ZP_03669257.1| hypothetical protein LmonFR_00275 [Listeria monocytogenes FSL R2-561] gi|16411720|emb|CAD00328.1| arpJ [Listeria monocytogenes EGD-e] Length = 486 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 104/279 (37%), Gaps = 24/279 (8%) Query: 1 MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I+ F+ + T L I+++G L G++ + Sbjct: 1 MQKHLLQKFAAILLVFIVVFSGFTSVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F F Q ++ K K +SV+ SG + Q TT E + Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 174 --VGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFSNGSKE-T 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKEYQKEANKLM 269 >gi|239817984|ref|YP_002946894.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239804561|gb|ACS21628.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 303 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 96/235 (40%), Gaps = 6/235 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS----AIFDDPSKI 78 L I++ G + G+ + G + GF V+ C + + A+ + + Sbjct: 25 QTDTLKKIRESGAITMGVRDASGAMSFTLGPGSYTGFHVEVCERVVADIGRALQIEKIHV 84 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 +Y + + R +Q+ +DI T R+ + F P Y +G + GI Sbjct: 85 KYQLVTPQNRIALVQNGTVDIECGTTTNNAARQKDVA--FAPTLYVEGVRIAVKAASGIV 142 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S +QLSG ++ GTT+ L + + ++ + E + R D + D Sbjct: 143 SPAQLSGKAVAATTGTTSVQLLRKLKREGAGEIAEVLAKDNSEGFLLLESGRVDGFAADG 202 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L L + P+++ +L ++S P+A + +GD + +V + ++ + E Sbjct: 203 QILATLISKSREPAQYKLLDQVLSVEPIAIMLAKGDPAFKKLVDQSVVSLARSGE 257 >gi|78061686|ref|YP_371594.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77969571|gb|ABB10950.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 266 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 83/250 (33%), Gaps = 16/250 (6%) Query: 1 MYK---DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M F I ++ T+ S A +L +K+ G LK + F A+G + Sbjct: 1 MKHFTPTFKQGIAAALLCIATATSHAADLLDTVKQSGVLKIALEGTYPPFDYRNADGQLE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + P Q++ LQ+ + D++ T R L Sbjct: 61 GFDVDVAKAVAARLGVKP---QFVTTEWSGILAGLQAGKFDVIVNQVAITPSR--QQALD 115 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + + + S+ +L G I V G+ + V Sbjct: 116 FSTPYVYSSAQLLQRQNDARAFKSLDELKGKKIGVTMGSNYVDLVKTVPA-----IDLQV 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E A R DA D + + + N R + + +G+ Sbjct: 171 YPGTPENLRDLAAGRIDAAVNDR-LMLSYLIKNSRLPLRPGSVLAGGEDRMGIPFRKGNP 229 Query: 236 EWYNIVSWTH 245 ++ + Sbjct: 230 KFAKAIDDAV 239 >gi|15675229|ref|NP_269403.1| putative amino acid ABC transporter periplasmic amino acid-binding protein [Streptococcus pyogenes M1 GAS] gi|71910795|ref|YP_282345.1| histidine-binding protein [Streptococcus pyogenes MGAS5005] gi|13622398|gb|AAK34124.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Streptococcus pyogenes M1 GAS] gi|71853577|gb|AAZ51600.1| histidine-binding protein [Streptococcus pyogenes MGAS5005] Length = 278 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 79/251 (31%), Gaps = 13/251 (5%) Query: 2 YKDFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K + F + + G +K+ + G + V +G Sbjct: 4 KKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGRC 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 KGFD+D + + K+ + +N + L + +ID++ T R + Sbjct: 64 KGFDIDLAKEVFHQYG---LKVNFQAINWDMKEAELNNGKIDVIWNGYSITKER--QDKV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI-- 174 AF + Q ++ K+ I ++S + + Q+ ++ +L K Sbjct: 119 AFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDSLLRTPKLLKDFIKNKDA 178 Query: 175 -VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +E + ++ R D D + + ++P + + + Sbjct: 179 NQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKE 238 Query: 234 DTEWYNIVSWT 244 D ++ Sbjct: 239 DKTLQAKINRA 249 >gi|283455710|ref|YP_003360274.1| glutamate-binding protein gluB [Bifidobacterium dentium Bd1] gi|283102344|gb|ADB09450.1| Glutamate-binding protein GluB [Bifidobacterium dentium Bd1] Length = 256 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 44/238 (18%), Positives = 88/238 (36%), Gaps = 16/238 (6%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 + ++ + G ++ GI G NG + GFDVD + ++ + Sbjct: 1 MFAVSACGADD-------ADGKIRIGIKFDQPGLGFK-KNGTYVGFDVDVAKYVAKKLGY 52 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +I + +K+R LQ+ +D + T R+ ++F + GQ ++ K Sbjct: 53 SEDQIVWKEAPSKQREAMLQNGDVDFIVATYSITDERKKV--VSFAGPYFVAGQDLLVRK 110 Query: 134 K-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I L+G +C G+T+ +T+ + F + + + E A + D Sbjct: 111 DETSIKGPEDLNGKRLCSVTGSTSAVTVKEKFAS---EVQLMEQPGYAECATALFSGIVD 167 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A T D L L ++ ++ I +GDT+ ++ M+ Sbjct: 168 AVTTDDIILAGLASAAR--GRLRVVGKPFTQEYYGVGIKKGDTQLATKINNAIADMIQ 223 >gi|318605287|emb|CBY26785.1| cystine ABC transporter, periplasmic cystine-binding protein FliY [Yersinia enterocolitica subsp. palearctica Y11] Length = 253 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 77/241 (31%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + + L +L +K+RG L G+ F+ +G GF+VDF A Sbjct: 1 MMAVALATGLNVKSYAAGDLLDQVKERGTLIVGLEGTYPPFSFQGEDGKLTGFEVDFANA 60 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L+SK+ID+ + R+ F G Sbjct: 61 LAEHMGVKA---KITPTKWDGMLASLESKRIDVAINQVTISDERKK--KYDFSTPYTVSG 115 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + K S L G + V G+ E L + K ++ Sbjct: 116 IQVLTKKGNEGKFSKPEDLVGKKVGVGLGSNYEQWLRENLK----GVDIRTYDDDPTKYQ 171 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + ++ A+ + + E ++ Sbjct: 172 DLRVGRTDAILVDR--LAALDLVKKTNDTLTVAGPAFARQESGVALRKNNPELLAAINQA 229 Query: 245 H 245 Sbjct: 230 I 230 >gi|327394609|dbj|BAK12031.1| lysine-arginine-ornithine-binding periplasmic protein precursor ArgT [Pantoea ananatis AJ13355] Length = 260 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 89/279 (31%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L + S ++ G + F A G GFD Sbjct: 1 MKKRVLALSLMLGLSSAASVFAAVPT--------SIRVGTDPTYPPFESKNAQGQLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + I +K Y+ + +L++K+ID + + T R+ + F Sbjct: 53 IDLANEICKRI---QTKCTYVESDFDALIPSLKAKKIDAIISSLSITAKRQEEIA--FSD 107 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K I + L G +I V GTT E +Y++ + P + Sbjct: 108 KLYAANARLVAPKGSKIEPTPEALKGKNIGVLQGTTQETYANEYWRPKGVTVTP--YANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + A R DA D L + + + + + D Sbjct: 166 DLVYQDLTAGRIDAAFQDEVQAAEGFLKQPVGKSYAFAGPAVKDDKIFGVGTGMGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE A+ A E ++++K N +V Sbjct: 226 TELKA-------AIDKAFESMRKDGTYDKIAKKYFNFNV 257 >gi|313680186|ref|YP_004057925.1| amino acid ABC transporter substrate-binding protein, paat family [Oceanithermus profundus DSM 14977] gi|313152901|gb|ADR36752.1| amino acid ABC transporter substrate-binding protein, PAAT family [Oceanithermus profundus DSM 14977] Length = 254 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 82/235 (34%), Gaps = 15/235 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +++ L L+ L + +IK+ G + G F + KGFD Sbjct: 1 MKRILWLASLVLV-LGSLGMAQKFRTFPEIKQSGKILIGTEGAFPPFNFFDDQNNLKGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + P + +AL + D + + T R + F Sbjct: 60 IDIGNAIAGQLGLGPE---WKAHAWDTMLIALNQGRFDFVIASHTITEERAK--AVDFTK 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + K G + +L G I Q GTT E F ++ Sbjct: 115 PYYCTGNVIVS-KPGGPQTPEELKGKVIGAQLGTTFEE-----FAKQFGPKQLKTYQTNP 168 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + R DA+ D + D ++ + ++++ + A+ +G++ Sbjct: 169 DAVQDLMLGRIDAWITDQFTAIEAIQSRD---LNLQISGLLNREEIGMAVAKGNS 220 >gi|291618215|ref|YP_003520957.1| ArgT [Pantoea ananatis LMG 20103] gi|291153245|gb|ADD77829.1| ArgT [Pantoea ananatis LMG 20103] Length = 260 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 89/279 (31%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L + S ++ G + F A G GFD Sbjct: 1 MKKRVLALSLMLGLSSAASVFAAVPT--------SIRVGTDPTYPPFESKNAQGQLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + I +K Y+ + +L++K+ID + + T R+ + F Sbjct: 53 IDLANEICKRI---QTKCTYVESDFDALIPSLKAKKIDAIISSLSITAKRQEEIA--FSD 107 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K I + L G +I V GTT E +Y++ + P + Sbjct: 108 KLYAANARLVAPKGSKIEPTPKALKGKNIGVLQGTTQETYANEYWRPKGVTVTP--YANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + A R DA D L + + + + + D Sbjct: 166 DLVYQDLTAGRIDAAFQDEVQAAEGFLKQPVGKSYAFAGPAVKDDKIFGVGTGMGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE A+ A E ++++K N +V Sbjct: 226 TELKA-------AIDKAFESMRKDGTYDKIAKKYFNFNV 257 >gi|126649374|ref|ZP_01721615.1| amino acid ABC transporter (substrate-binding protein) [Bacillus sp. B14905] gi|126593699|gb|EAZ87622.1| amino acid ABC transporter (substrate-binding protein) [Bacillus sp. B14905] Length = 264 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 82/254 (32%), Gaps = 15/254 (5%) Query: 1 MYK--DFFVSILCLIILFFTSF-----STNASIL-GDIKKRGFLKCGINTGLVGFAEVKA 52 M K + ++ + L +++ S D + K G F V Sbjct: 1 MKKTAWMLLMMIAALTLALAGCGTKDNASSGSTPSEDADGKKVYKVGTEATFAPFESVDD 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G G DVD +A++ + ++++ + + F +++ + I + T R+ Sbjct: 61 KGKIVGIDVDILKAIADEM---NFEVEWNNIGWEPVFQTIKNGETHIGASGITITDERKE 117 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y ++ + I S+ +L + VQ T + + Sbjct: 118 --SFDFTEPYYESQLLIVVKEDSKIKSLDELKDKKVSVQINATGHMAAKKLQGEA--STN 173 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + FE DA GD + +Y + VI D K + + Sbjct: 174 IMAFESQPIAIQEMLNGNVDAAIGDNAVVYEYIKAHPDQKIKVIQDDAFEKEYYGFMVQK 233 Query: 233 GDTEWYNIVSWTHY 246 G+ E + ++ Sbjct: 234 GNKELLDKLNEGLK 247 >gi|153213074|ref|ZP_01948612.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 1587] gi|124116121|gb|EAY34941.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 1587] Length = 260 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 85/254 (33%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + + K+ ++ GI F+ +A+G KGFD Sbjct: 3 MKKWLVATALIATTISGVTQA---------KEWKTVRFGIEGAYPPFSWTEADGSLKGFD 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + +P + +L +++ D + T R+ + F Sbjct: 54 VDMANALCDEMKVE---CKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 108 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 FI K + L G I VQ TT + + D + + + Sbjct: 109 KYAQIPNKFIAKKGADLAFTKEGLKGVKIGVQRATTHDKYITDNY---GDTVDIVRYGSF 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E R A GD SAL L + + ++ + A+ + D Sbjct: 166 DEAYLDLANGRIAAVLGDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQD 225 Query: 235 TEWYNIVSWTHYAM 248 E + A+ Sbjct: 226 KELTEKLDAAITAL 239 >gi|167033607|ref|YP_001668838.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166860095|gb|ABY98502.1| extracellular solute-binding protein family 3 [Pseudomonas putida GB-1] Length = 262 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 92/280 (32%), Gaps = 28/280 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + S +I F+ A L +++ L+ ++ F+ + GFD Sbjct: 7 RMLLASSAVAVIALFSQGVAQADDLQAVQESKILRVAMSGQYAPFSFANEKNEIVGFDAS 66 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 AL+ + I+ + L +K+ D + + T R + F Sbjct: 67 IGEALAQRLGVK---IKIITTPFDGIIAGLLAKKYDAVIASMTITPER--LKAVDFVGPY 121 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y G+ + + I + L ++ V G + D + ++ + E+ Sbjct: 122 YHAGRTIGVKEGSPIKGLDDLKDVTVGVTLGDSH-----DKWARARGNLKVRTYKGLPEM 176 Query: 183 DAAYRAHRCDAYTGDI-SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A R DA D + A+K T + + + + L AI + + E + Sbjct: 177 LVDLDAGRIDAVVMDSIPVMVAVKETGQKVRIINLPDEQGGREGLGIAIRRNNPELKAQL 236 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGID 280 +++ D T ++ R++G D Sbjct: 237 QKAL----------------DEILADGTYKEISMRWVGSD 260 >gi|19746199|ref|NP_607335.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Streptococcus pyogenes MGAS8232] gi|19748381|gb|AAL97834.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Streptococcus pyogenes MGAS8232] Length = 278 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 79/251 (31%), Gaps = 13/251 (5%) Query: 2 YKDFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K + F + + G +K+ + G + V +G Sbjct: 4 KKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKC 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 KGFD+D + + K+ + +N + L + +ID++ T R + Sbjct: 64 KGFDIDLAKEVFHQYG---LKVNFQAINWDMKEAELNNGKIDVIWNGYSITKER--QNKV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI-- 174 AF + Q ++ K+ I ++S + + Q+ ++ +L K Sbjct: 119 AFTDSYMRNEQIIVVTKRSDIKTISDMKHKVLGAQSASSGYDSLLRTPKLLKDFIKNKDA 178 Query: 175 -VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +E + ++ R D D + + ++P + + + Sbjct: 179 NQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKE 238 Query: 234 DTEWYNIVSWT 244 D ++ Sbjct: 239 DKTLQAKINRA 249 >gi|258647025|ref|ZP_05734494.1| amino acid ABC transporter, amino acid-binding protein [Dialister invisus DSM 15470] gi|260404466|gb|EEW98013.1| amino acid ABC transporter, amino acid-binding protein [Dialister invisus DSM 15470] Length = 269 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 43/264 (16%), Positives = 88/264 (33%), Gaps = 13/264 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKANGDW 56 K + L + + G++ G+ Sbjct: 4 KKMIVIGALACGAAGLVAGCGGEKKAAAPAADKSAKPTKIVAGMDDTFAPMGFRDDKGEI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D +A+S I I++ P++ + L+S +ID + T R+ L Sbjct: 64 VGFDIDMAKAVSKEIG---IPIEFKPIDWASKETELESGRIDCIWNGFTMTPERQK--AL 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 AF + Q +++ + +L G + +Q +T + L + Sbjct: 119 AFTKPYMDNVQVYVVLADSAVQKAEELKGKKLSIQESSTAQTLLDRDENLKKSFGEIKAY 178 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R DA D + +P++ LP +SK + I + + Sbjct: 179 PDLTACFMDLESGRADAVLADTCLI--EYYMTKKPNKFRELPGEVSKDTFSIGIKKDNKV 236 Query: 237 WYNIVSWTHYAMV-TAEELGITQK 259 +I++ ++ E I+QK Sbjct: 237 LVDILNDGIDKVIKNGEASKISQK 260 >gi|325062212|gb|ADY65902.1| amino acid ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 268 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 86/246 (34%), Gaps = 8/246 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V+ L+ F A L DI G L+C + + GFD Sbjct: 1 MKKSVIVA--GLLAATFAITPAKADKLDDIISSGTLRCAVVLDFPPMGARDDANNPIGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C L+ A+ ++ ER AL S ++D+ +T TL R ++G+ Sbjct: 59 VDYCNDLAKALGVTAEIVE---TPFPERIPALMSGRVDVGVASTSDTLERAKTVGM--TV 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + K G+ S + G ++ AGT + L K + ++ Sbjct: 114 PYFAFEMAVTANDKSGVKSFEDMKGKTVGATAGTFEAIALEKTVKEWGVG-EFRPYQTQA 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ A + DA + A T V+ +A + + + N Sbjct: 173 DVFLALSQGQIDATVSTSTVAQANVKTGKFAGISVVGKAPYDIDYVALFTNRDEYGFINY 232 Query: 241 VSWTHY 246 ++ Sbjct: 233 LNLFIN 238 >gi|217963588|ref|YP_002349266.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria monocytogenes HCC23] gi|217332858|gb|ACK38652.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria monocytogenes HCC23] gi|307571836|emb|CAR85015.1| amino acid ABC transporter, amino acid-binding/permease protein [Listeria monocytogenes L99] Length = 486 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 106/279 (37%), Gaps = 24/279 (8%) Query: 1 MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I+ F+ + T L I+++G L G++ + Sbjct: 1 MQKHLLQKFAAILLVFIVVFSGFTTVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV + ++ + K++ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAKKIAKNL---NVKLEIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F F Q ++ K K +SV+ SG + Q TT E + Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 174 --VGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKE-T 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQKEANKLM 269 >gi|256830362|ref|YP_003159090.1| extracellular solute-binding protein family 3 [Desulfomicrobium baculatum DSM 4028] gi|256579538|gb|ACU90674.1| extracellular solute-binding protein family 3 [Desulfomicrobium baculatum DSM 4028] Length = 270 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 105/272 (38%), Gaps = 18/272 (6%) Query: 1 MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 MY+ + I+CL + S + S+L + +RG L+ G +T V +A NGD+ Sbjct: 1 MYRITAILIVCLSLSAGFMPRESSAAEKSVLDQVMERGVLRVGFDT-FVPWAMKDKNGDY 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GF++D R +++ + + I+ +P AL + + DI+ R +L + Sbjct: 60 IGFEIDVARKVAADMGVE---IELVPTKWSGIIPALLTGKFDIIIGGMGIQPSR--NLKV 114 Query: 117 AFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F F G + + +SS+ + I + A T A K H K Sbjct: 115 NFSSPYEFSGMSLVASIAAAPNLSSLDDFNKPEIILSAKTGASSVAA--AKKHIPKATVR 172 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +F+ + R A + N + + ++ P+ A+ +GD Sbjct: 173 MFDDEAQALQEVLNGRAHAMVASAPFPEQQAIRNKDTLYLPLQGETFAQEPIGFAVRKGD 232 Query: 235 TEWYNIV-SWTHYAMVT---AEELGITQKNIN 262 ++ N + +W A AE K ++ Sbjct: 233 HDFLNFLNNWVLVAGTEGWLAERYAYWFKTMD 264 >gi|148543752|ref|YP_001271122.1| extracellular solute-binding protein [Lactobacillus reuteri DSM 20016] gi|184153158|ref|YP_001841499.1| glutamine ABC transporter substrate binding component [Lactobacillus reuteri JCM 1112] gi|227363268|ref|ZP_03847400.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM2-3] gi|325682124|ref|ZP_08161642.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM4-1A] gi|148530786|gb|ABQ82785.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus reuteri DSM 20016] gi|183224502|dbj|BAG25019.1| glutamine ABC transporter substrate binding component [Lactobacillus reuteri JCM 1112] gi|227071724|gb|EEI10015.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM2-3] gi|324978768|gb|EGC15717.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM4-1A] Length = 283 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 85/239 (35%), Gaps = 9/239 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + I++R + G++ V + NG G+DVD RA+ K+ + Sbjct: 30 ADTQDTWNRIERRKRVIVGLDDSFVPMGFRQKNGKLVGYDVDLARAVFKQYG---IKVDF 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P++ + L++ ID+L R +AF + Q + KK I ++ Sbjct: 87 QPIDWSMKETELKNGTIDLLWNGYSVNPSRAK--KVAFSRYYLENRQILVTKKKSNIKNL 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYH---PIVFERVEEIDAAYRAHRCDAYTGD 197 + ++G ++ VQ G+T L + K K P++++ A+R D Sbjct: 145 NGMTGKTLGVQNGSTGVTVLDEKPKLLKDKIKNHTPVLYDTFPNAFIDLNANRIQGILMD 204 Query: 198 ISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + + + A + +GD ++ + EL Sbjct: 205 EVYANYYIKHQPNSNSYRTYISKELPMEHFAVGMRKGDKTLKKKINQGLGNLQKNGELR 263 >gi|312862723|ref|ZP_07722963.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus vestibularis F0396] gi|311101583|gb|EFQ59786.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus vestibularis F0396] Length = 277 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 25/259 (9%) Query: 2 YKDFF----VSILCLIILFFTSF--STNASI--------LGDIKKRGFLKCGINTGLVGF 47 +K F V+ L ++ +F S + + I KRG L G+ + F Sbjct: 3 FKKFLRYLTVACLAIVTIFLISSYKTKAEDTSKLLDSKAVQKIVKRGTLNVGVKQDVPNF 62 Query: 48 AEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 A ++G +VD + ++ + K+ Y+P+ + R + + ID+L Sbjct: 63 GYYSAKTNSYEGMEVDLAKKIADEL---KVKVNYIPVTTQTREPLMDNGTIDLLIGTYTI 119 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ S + Y D GF++ K GI+ +S L+G +I V G +T+ L +Y A Sbjct: 120 NDERKASYAI--SDPYYHDQIGFLVLKNSGINKISDLNGKTIGVSQGASTKAALQEYASA 177 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 HN+K++ + E+ + AHR +A++ D S L + + L + Sbjct: 178 HNLKFNYVQLGSFPELAVSLYAHRVNAFSVDKSILSGYESKKTK-----TLKEGFKTQEY 232 Query: 227 APAIIQGDTEWYNIVSWTH 245 A + + E + + Sbjct: 233 GIASSKSNQELIDYTNDLI 251 >gi|167036063|ref|YP_001671294.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166862551|gb|ABZ00959.1| extracellular solute-binding protein family 3 [Pseudomonas putida GB-1] Length = 266 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 88/250 (35%), Gaps = 14/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + + A + D KRG L+ G++ + F G+ GF+ Sbjct: 1 MIKKYLSRLLVGVTALVAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ + AL + + D++ T R +L L F Sbjct: 61 VDILKAMAKSMGVKFEAVS---TAYDGIIPALLTDKFDMIGSGMTLTQER--NLRLNFSE 115 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K+ I S L+ + + TT E+ + Sbjct: 116 PFIVVGQTLLIRKELAGEIKSYKDLNNEKYRLTSKLGTTGEMVSKKLIGKAKYHG----Y 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +E + DA+ D + L + + PLA + +GD + Sbjct: 172 DNEQEAVMDVVNGKADAFVYDAPYNVVAVEKAGAGK-LLFLEEPFTYEPLAFGLKKGDYD 230 Query: 237 WYNIVSWTHY 246 N ++ + Sbjct: 231 SINFINNFLH 240 >gi|299541710|ref|ZP_07052040.1| amino-acid ABC transporter extracellular-binding protein yqiX precursor [Lysinibacillus fusiformis ZC1] gi|298725805|gb|EFI66439.1| amino-acid ABC transporter extracellular-binding protein yqiX precursor [Lysinibacillus fusiformis ZC1] Length = 264 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 92/266 (34%), Gaps = 22/266 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-------ASILGDIKKRGFLKCGINTGLVGFAEVKA- 52 M F+ +L L+I + T S + + LK G + F V A Sbjct: 1 MKNKLFIMMLVLVIGVLAACGTKDNNASDTGSTTDT-EGKQVLKVGTSADYAPFEYVDAA 59 Query: 53 NGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G+ GFD+D + + I D +Q ++ ALQ+ +ID++ RE Sbjct: 60 KGEEIIGFDIDLIKLVGEKIGVD---MQVQDMDFNSLVPALQAGKIDVVISGMTPNPERE 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + F Q ++ K GI + L+G I VQ + E + A + Sbjct: 117 KV--VDFSDKYNETEQVILVKKDSGIKKEADLAGKKIGVQTASIQENLGNEI--AKKVDV 172 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 R+ EI + R DA + TND+ + +A Sbjct: 173 TVEGRTRIPEIVQDMMSKRLDAGILEGGVAKGYLKTNDQLEAFPVEEQPEDFKAIAV--- 229 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGIT 257 ++ + ++ + AEE I Sbjct: 230 PKGSDLKDKINKALKEL--AEEGKIK 253 >gi|183396654|dbj|BAG28253.1| periplasmic amino acid-binding protein of amino acid ABC transporter [Desulfotignum balticum] Length = 262 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 82/249 (32%), Gaps = 10/249 (4%) Query: 1 MYKDFFVS---ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F S L +I + +T + S I++ G + G F+ +G + Sbjct: 1 MKKKLFASFILALAVIAVTWTCAAAGDSRWSKIEQSGSITVGNCPEYPPFSFRNTSGLVE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD DF RAL +A+ D + + ++ DI+ + S + Sbjct: 61 GFDSDFARALGNALGVD---VVIKDTAWEGLVAGMKKGDHDIIISCMSPEEATQASDSVN 117 Query: 118 FRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 Y + + I++ L+G + VQA +T+E+ + Sbjct: 118 MSNPYYQLSEIIVTRSDVTDITTKEDLAGRIVGVQANSTSEVAGDSLADMDIKVKDLRRY 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 R E + R DA + I+ D + + + G+ E Sbjct: 178 NRNSEALIDLKNKRVDAVVVG---FAYAATKIKDSPDLKIINDPVRSVDIVVVLDHGEDE 234 Query: 237 WYNIVSWTH 245 ++ Sbjct: 235 LTEKINQAI 243 >gi|154508366|ref|ZP_02044008.1| hypothetical protein ACTODO_00863 [Actinomyces odontolyticus ATCC 17982] gi|293193556|ref|ZP_06609826.1| CjaA protein [Actinomyces odontolyticus F0309] gi|153798000|gb|EDN80420.1| hypothetical protein ACTODO_00863 [Actinomyces odontolyticus ATCC 17982] gi|292819912|gb|EFF78914.1| CjaA protein [Actinomyces odontolyticus F0309] Length = 300 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 11/218 (5%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 IK+ G + GI + F + A+G G+DV + +++ + +Y+P++A Sbjct: 52 EQIKEAGEIVIGIFSDKAPFGYIDADGKPAGYDVVYGDRIAADLGVTA---KYVPVDAAA 108 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R L S ++DI N T R + F + G + I+ VSQL+G + Sbjct: 109 RTEVLASNKVDITLANFTVTPERAE--KVDFANPYFKVSLGVVSPTSAEITDVSQLAGKT 166 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + V GTT E F+A++ + +++ + A R DA++ D + + A + Sbjct: 167 LIVTKGTTAEAY----FEANHPEVKLQKYDQYSDAYQALEDGRGDAFSTDNTEVIAWAIQ 222 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 P V + + S +A A+ +G+T + ++ Sbjct: 223 --HPGFSVGIKSLGETSYIAAAVKKGNTALLDWLNNQL 258 >gi|258611906|ref|ZP_05711707.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503] gi|258607027|gb|EEW19635.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503] Length = 211 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 77/216 (35%), Gaps = 11/216 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S+ S IKK + G++ V + + Sbjct: 1 MKKGLLITVMLMVMLALGACSSGESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + ++ P++ + L++ ID++ T R+ + Sbjct: 61 GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPI 174 F + Q + K I+ S + ++ Q G ++ +A + P Sbjct: 116 FSQPYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPE 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 +++ + R D D + Sbjct: 176 LYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKTKK 211 >gi|313895101|ref|ZP_07828658.1| glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Selenomonas sp. oral taxon 137 str. F0430] gi|312975996|gb|EFR41454.1| glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Selenomonas sp. oral taxon 137 str. F0430] Length = 257 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 80/257 (31%), Gaps = 13/257 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M I +L S ++ L+ G F +++GF Sbjct: 1 MKLKKLAMIFTGALLSLAVVGCGGSGDQAKQEAKTLRVGATIDFAPFEFQDEGQKEYQGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D RA++ + + + ALQ+K ID++ R+ + F Sbjct: 61 DMDLIRAIAKEMGREAE---IQNIGFDGLIPALQAKNIDVIISGMTINDERKE--KVNFS 115 Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ + I S + L G + Q GTT+ L + + Sbjct: 116 APYYQSGLTMVVRSDEEAIKSFNDLKGHKVAAQIGTTSANMLKE-----QEGITVLELNT 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + +A DA D + + L D++S AI + +TE Sbjct: 171 PADCFMELKARGVDAVVNDRPVN-DYYINQTQAVGVKSLSDMLSAEEYGIAISKDNTELQ 229 Query: 239 NIVSWTHYAMVTAEELG 255 + + E Sbjct: 230 KEIDAALKKLHDNGEYD 246 >gi|323498511|ref|ZP_08103504.1| hypothetical protein VISI1226_09569 [Vibrio sinaloensis DSM 21326] gi|323316400|gb|EGA69418.1| hypothetical protein VISI1226_09569 [Vibrio sinaloensis DSM 21326] Length = 262 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 45/231 (19%), Positives = 84/231 (36%), Gaps = 15/231 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + + IL DIK G LK ++G + F NG + GFD+D + ++ AI + Sbjct: 16 TPALADPILDDIKSSGELKVCFDSGYMPFEMTAKNGQYIGFDIDLGKQMARAIGVKYVPV 75 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI--MHKKKG 136 L + + ++ T R ++ + F GQ + + Sbjct: 76 N---TAWDGIIPTLLTGKCHMIMGGMTITPKR--NIQVNFADPYVVIGQSILLDPKHEGK 130 Query: 137 ISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+ L+ A V TT E + Y + ++E E + DA+ Sbjct: 131 ITDYRDLNSAEFVVATKLGTTGEQAIKRYLPKAKVN----LYETQSEAVLEVANGKVDAF 186 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D+ + + + V L + + PL A+ QG+ + N ++ Sbjct: 187 IYDLPFNA--IYSAENKGQLVHLAEPFTYEPLGWAVPQGNPDTINFLNGYL 235 >gi|50123405|ref|YP_052572.1| putative extracellular solute-binding protein [Pectobacterium atrosepticum SCRI1043] gi|49613931|emb|CAG77384.1| putative extracellular solute-binding protein [Pectobacterium atrosepticum SCRI1043] Length = 279 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 89/250 (35%), Gaps = 13/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + + + L A +L DI RG L+C + + + F+ G Sbjct: 1 MTLKYSACSVLALPLVLVFSPAKADLLSDITARGDLQCAVYSDVPPFSSPDPKTRQLAGM 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C AL+ + + +P + + R + + + D+L N +T R + F Sbjct: 61 DVDLCHALAKEMGVK---VTLVPTSVEARIAVIATGRADVLIANLAYTKTR--GNQIQFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + ++ K ++ G I GTT+E ++ H + F+ Sbjct: 116 DPYYVAKEMLLVKKANADKAIEDFKGQRISATKGTTSEQSI------HLKGGKAVTFQDS 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 A + ++ + + + E ++ + ++ P+ + + + Sbjct: 170 ASAFLALQQNKAVGFVTNTMTGIKMISQAKKDGIELAMIKEPMALEPIGVGMKRDEPALL 229 Query: 239 NIVSWTHYAM 248 V+ + M Sbjct: 230 AKVNSSLKTM 239 >gi|323142138|ref|ZP_08076983.1| glutamine ABC transporter periplasmic protein [Phascolarctobacterium sp. YIT 12067] gi|322413398|gb|EFY04272.1| glutamine ABC transporter periplasmic protein [Phascolarctobacterium sp. YIT 12067] Length = 255 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 77/256 (30%), Gaps = 13/256 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M K ++ ++ L+ G F K GF Sbjct: 1 MKKVLVFLMMAIMACSMLLTGCGGEEKKAADSAKVLRVGTEPVFAPFEFPKEGSKDLTGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D++ AL + ++ + + AL S ID+ T R+ + F Sbjct: 61 DIELIEALGKKMGYK---VEMVSMGFDALIPALNSNNIDVAIAGMTITDERKKV--VDFT 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ K + S+ L G +I Q GTT E A F Sbjct: 116 ESYYTSGLMIMVRKDSNVKSIDDLKGKTIACQIGTTGENKSRTVEGAK-----VKAFNTQ 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E + DA GD + + + + + P A+ +G ++ Sbjct: 171 DEASLELKNGGADAVIGDAPVIEYYMTKAGK-DFAKTVGERMEAEPYGIAVKKG-SKLAG 228 Query: 240 IVSWTHYAMVTAEELG 255 ++ + + E Sbjct: 229 DLNKALAELKKSGEYD 244 >gi|312278808|gb|ADQ63465.1| Polar amino acid ABC uptake transporter substrate binding protein [Streptococcus thermophilus ND03] Length = 276 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 85/254 (33%), Gaps = 18/254 (7%) Query: 1 MY--KDFFVSILCLIIL-FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANG 54 M K + + + L + S++ + L +K +G L +N F Sbjct: 1 MKPWKKLLLGLAGIFALTSLAACSSSTNTLDKVKNKGTLTIALNPHFAPFEFKTIQDGKD 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D++ +A+ + +++ ++ ++QS + DI T R+ Sbjct: 61 TIAGADIEIAKAIGDELGVK---VKFSEMSFDNVLASVQSGKADIAISGISATKERQKI- 116 Query: 115 GLAFRPITYFDGQGFIMHKK---KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F Y ++ K K +S S SI VQ G+ E KA+ + Sbjct: 117 -FDFSDTYYDSETVLLVKKDATEKTYKQISDFSKKSIAVQKGSIQENI----AKANLLDA 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + + E ++ + + + + N + I S A A+ Sbjct: 172 NVVSLAQPGEAINELKSGQVEGVVLEKAIAKGYVDQNSDLTMSDIALKSDSNDAYAVAMP 231 Query: 232 QGDTEWYNIVSWTH 245 +G + V+ Sbjct: 232 KGSDDLKAKVNKII 245 >gi|288905588|ref|YP_003430810.1| amino acid transporter, amino acid-binding protein [Streptococcus gallolyticus UCN34] gi|288732314|emb|CBI13884.1| putative amino acid transporter, amino acid-binding protein [Streptococcus gallolyticus UCN34] Length = 273 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 93/281 (33%), Gaps = 18/281 (6%) Query: 1 MY-KDFFVSILCL---IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKAN 53 M K F+ +L L + L S+N ++ I K+G L ++ F V Sbjct: 1 MKIKKIFLGVLALISVLTLAACGSSSNENLQEKIVKKGKLVVAVSPDYAPFEFKALVDGK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G DV+ +A++ + + ++ ++ +LQ+ + D+ +T R Sbjct: 61 DTIVGADVELAQAIADELGVE---LELSSMSFDNVLSSLQTGKADMAISGLSYTEERAKV 117 Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F Y ++ +SV LSG + VQ GT E D Sbjct: 118 --YDFSDAYYETENAILVKASDVDTYTSVDSLSGLKVAVQKGTIEENLAKDQL----SDS 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + + E ++ + A + N + + A A+ Sbjct: 172 NIVSLTAMGEAINELKSGQVQAVDLEKPVAEGYLSQNSDLALASFALETGEGDAKAVAMP 231 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + E V+ + ++ + Q++ D + D Sbjct: 232 KDSGELVKTVNKVIKKLAKEDKYKQFISDAAQLTGDAVDED 272 >gi|229104759|ref|ZP_04235420.1| Arginine-binding extracellular protein artP [Bacillus cereus Rock3-28] gi|228678632|gb|EEL32848.1| Arginine-binding extracellular protein artP [Bacillus cereus Rock3-28] Length = 259 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 93/254 (36%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N + + + + L G + + V+A+ + G Sbjct: 1 MKKLLSISFALILIVSMFSACSNGDVKEEKRNKKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDIDIAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ K + K +R Sbjct: 116 TDIYFVAKNMIVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEFKKQVDFKAEGR--DR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAILEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|114565876|ref|YP_753030.1| extracellular solute-binding protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336811|gb|ABI67659.1| extracellular solute-binding protein, family 3 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 255 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 80/232 (34%), Gaps = 8/232 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +++ IK +G+ G++ + GFDVD + ++ + + Sbjct: 10 APETSSDESWTKIKDKGYFVMGLDDAFPPMGFRDEANEIVGFDVDLAKEVAQRLGVE--- 66 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +Q+ + + L S ID++ T R+ F D Q ++ I Sbjct: 67 VQFQSIVWDTKKEELNSGNIDVIWNGFTITEERK--QDFLFSKPYISDRQIIVVRADSDI 124 Query: 138 SSVSQLSGASICVQAGTTTELTL-ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 +S + L+G I +QA ++ + AD +K + + FE + + + Sbjct: 125 ASKADLAGKKIGIQAASSANEAVEADKETFEVIKDNLLQFESNDLALRDLKGGGVE--AV 182 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + + + P ++ +L D D ++ V M Sbjct: 183 VVDEVVGRYYLSKHPGDYKVLKDNFDLEDFGVGFRLDDKAFHAEVEKALDEM 234 >gi|302387425|ref|YP_003823247.1| extracellular solute-binding protein family 3 [Clostridium saccharolyticum WM1] gi|302198053|gb|ADL05624.1| extracellular solute-binding protein family 3 [Clostridium saccharolyticum WM1] Length = 257 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 86/261 (32%), Gaps = 20/261 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K+ + + F + + + G L N + N Sbjct: 1 MKKNVIAIAGVICMAAFLTACAGSGTKTETTAADQKEAAGKLVMVTNAEFPPYEYHD-NN 59 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D D +A++ + + ++ + A+QS + D + R+ Sbjct: 60 QIVGIDADIAKAIADKMGVE---LEIQDMAFDSLIPAVQSGKADFAAAGMTVNEDRKK-- 114 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F Q I+ + I + L+G I VQ GTT ++ D A Sbjct: 115 NVDFTDTYAEAAQVIIVKEGSQIKTPDDLAGKKIGVQTGTTGDIYADDIENA-----DIQ 169 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F + E A + DA D K+ + VIL + ++ A A+ + + Sbjct: 170 RFNKGMEAVMALSQDKIDAVIIDR---EPAKVFVKENAGLVILDEAFTEEEYAIAVKKDN 226 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 E + ++ + + EL Sbjct: 227 KELLDKMNGAIKELKESGELK 247 >gi|116671348|ref|YP_832281.1| extracellular solute-binding protein [Arthrobacter sp. FB24] gi|116611457|gb|ABK04181.1| amino acid ABC transporter substrate-binding protein, PAAT family [Arthrobacter sp. FB24] Length = 294 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 81/225 (36%), Gaps = 9/225 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 S + + K G +K G F +V +G GFDV+ + +++ + KI++ Sbjct: 45 AAGSTMEKLSKAGSIKIGTKFDQPLFGQVGLDGKPIGFDVEMGKLIAAKLGIPADKIEWS 104 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSV 140 + R ++ ++D++ R ++F Y GQ +++K I Sbjct: 105 ETVSANREPFIEQGKVDLVIATYTINDKR--KQVVSFAGPYYEAGQALMVNKDNDTIKKP 162 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + G +C G+T T+ + + A + R + +A T D Sbjct: 163 EDVKGKKVCSVTGSTPAATIVEKYGA-----ELVPAATYSACLEPLRNKQVEAITTDNVI 217 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L + + +K P + + DT + N ++ Sbjct: 218 LAGFVDKEPEA-FKLASDETFTKEPYGIGLKKDDTVFRNWINDQL 261 >gi|300763939|ref|ZP_07073935.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter [Listeria monocytogenes FSL N1-017] gi|300515280|gb|EFK42331.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter [Listeria monocytogenes FSL N1-017] Length = 486 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 102/279 (36%), Gaps = 24/279 (8%) Query: 1 MYKDFFVSILCLIILF---------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K I ++++F + T L I+++G L G++ + Sbjct: 1 MQKHLLQKIAAILLVFIVVFSGFTTVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K++ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLEIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F F Q ++ K K +SV+ SG + Q TT E + Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 174 --VGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKE-T 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQEKVNVSIKDIQDTGLLKKYQKEANKLM 269 >gi|302541695|ref|ZP_07294037.1| putative glutamate periplasmic binding protein [Streptomyces hygroscopicus ATCC 53653] gi|302459313|gb|EFL22406.1| putative glutamate periplasmic binding protein [Streptomyces himastatinicus ATCC 53653] Length = 305 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 51/283 (18%), Positives = 94/283 (33%), Gaps = 40/283 (14%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS--------------------------ILGDIKKRG 34 M + V + L+ + S K+ G Sbjct: 7 MRRTLTVILALLLAFTGSGCGKEGSPPAKGPAPEELPRYRVATDFRLPSSPTWRKAKRLG 66 Query: 35 FLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 +L G+ E G + GFD++ + +S+++ P I++ + + R ALQ Sbjct: 67 YLTVGVKEDQPYLGEKDPATGRYSGFDIEIAKMMSASLGFPPRTIRFRSIASANRETALQ 126 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQA 152 + QID LR+ +G F Y GQ ++ I + L+G ++C A Sbjct: 127 NGQIDYYVGTYTINPLRKRLVG--FAGPYYMAGQSLLVRTDTDDIHGPADLAGKTVCSAA 184 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T + + H + ++ +++ DA T D L P Sbjct: 185 GSTPLQRIQHDYPKA----HAVAYDNYSVCVDNLLSYQVDAVTTDNVILLGYAAKA--PE 238 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 E ++ SK P + + D + + A E Sbjct: 239 ELKLVGKPFSKEPYGIGVPKRDNAL----RFALDDAIEAHERN 277 >gi|261381399|ref|ZP_05985972.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria subflava NJ9703] gi|284795613|gb|EFC50960.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria subflava NJ9703] Length = 267 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 88/257 (34%), Gaps = 12/257 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ C + + + + G N F + + G +GFD Sbjct: 3 MKKWLATALACSALALTACGGQSNN--ASAPADKVYRVGSNAEFAPFESLDSAGKVEGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ A K+++ + F +L + +DI+ T + + F Sbjct: 61 VDLMNAMAKA---GNFKVEFKHQPWESLFPSLNNGDVDIVMSGVTITD--DRKQSMLFSD 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ K K +SS L + V G T + +++ N FE V Sbjct: 116 PYFEITQVVLVPKGKKVSSSEDLKNMAKVGVVTGYTGDFSVSKLLG--NDNPKIARFESV 173 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I D+ D + + N + + + LPD + A +GD Sbjct: 174 PLIIKELENGGLDSVVSDSAVIANYVKNNPTKGLDFISLPD-FTIENYGIAARKGDEATI 232 Query: 239 NIVSWTHYAMVTAEELG 255 +++ + + E Sbjct: 233 KMLNDALKKVRESGEYD 249 >gi|150376017|ref|YP_001312613.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150030564|gb|ABR62680.1| extracellular solute-binding protein family 3 [Sinorhizobium medicae WSM419] Length = 268 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 44/238 (18%), Positives = 82/238 (34%), Gaps = 17/238 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M L+ + +A L DI G L+C + N + GFD Sbjct: 1 MKTSIL--AFGLVAATALTSPAHADKLDDIIASGTLRCAVVLDFPPMGSRDENNEPIGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C L+ A+ ++ ER AL S ++D+ +T TL R ++G+ Sbjct: 59 VDYCNDLAKALGVTAEIVE---TPFPERIPALMSGRVDVGVASTSDTLERAKTVGM--TV 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++K GI S + G + AGT + L + KA ++ Sbjct: 114 PYFAFEMAVTANEKSGIKSFEDMKGKVVGATAGTYEAIALENQVKAWGEG-EFRPYQTQA 172 Query: 181 EIDAAYRAHRCDAYTGDISA---------LYALKLTNDRPSEHVILPDIISKSPLAPA 229 ++ A + DA + + + + P + + ++ Sbjct: 173 DVFLALSQGQLDATVSTSTVAQSNVKGGKFPGISVVDKAPFDIDYVALFTNREEYGFI 230 >gi|238927935|ref|ZP_04659695.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas flueggei ATCC 43531] gi|238884268|gb|EEQ47906.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas flueggei ATCC 43531] Length = 268 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 80/252 (31%), Gaps = 13/252 (5%) Query: 3 KDFFVSILCLI----ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 K L IL + A + + G + G++ N + G Sbjct: 4 KTVLTGAAVLACSAAILTGCGSTEKAPSTDNAAEMGKIIVGLDDNFPPMGFKDENNEIVG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + +++ ++ + L+S ++ +L D T R+ + F Sbjct: 64 FDVDLAKEAAKRLGRE---VEFKAIDWSSKEAELKSGRVQVLWNGLDITEKRKE--NMLF 118 Query: 119 RPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + Q + K ++ L+G ++ Q+ T E + + Sbjct: 119 SNPYMDNHQIIFVKKGNTAVTDEKSLAGKTVGTQSAGTAEEYMDASDFYKKEVKEVKKYP 178 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTE 236 R DA GD + + P L ++ S A + +T+ Sbjct: 179 DYVAAFMDLENGRLDAVIGDE--IVGRYYMSKHPDTLDALDVVVGPVSEFGIAFAKDNTK 236 Query: 237 WYNIVSWTHYAM 248 + V M Sbjct: 237 LRDEVQKVLDEM 248 >gi|170691224|ref|ZP_02882389.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170143429|gb|EDT11592.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 251 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 84/255 (32%), Gaps = 23/255 (9%) Query: 1 MYKDFFVSILC---LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +S+ C + S + +A L + NG Sbjct: 1 MKLQRLLSLACVTFAVTFGGFSGAASAQTPE------VLNVATDATFPPMEYT-ENGART 53 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD AL+ + ++Q+ ++ K L + + D T R + Sbjct: 54 GFDVDLMNALAKVMGK---RVQWTDIDFKGLIPGLIAHRFDAAISGIYITDERAKV--ID 108 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y G ++ I +V+ L+G + VQ GT + L D F N + E Sbjct: 109 FTDSYYAGGLAVLVKSDSPIKTVTDLNGKKVSVQVGTKSVNFLRDNFPQINR----VEVE 164 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + +E+ R DA A + +L ++ A+ + + + Sbjct: 165 KNQEMFDLVGIGRADAAVTGKP---AAYQVAKTRTGFRVLDKTLTTEAYGIAVRKDEPQL 221 Query: 238 YNIVSWTHYAMVTAE 252 + A + A+ Sbjct: 222 KAAFNTAL-ARIKAD 235 >gi|148550100|ref|YP_001270202.1| extracellular solute-binding protein [Pseudomonas putida F1] gi|148514158|gb|ABQ81018.1| extracellular solute-binding protein, family 3 [Pseudomonas putida F1] Length = 266 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 88/250 (35%), Gaps = 14/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + + A + D KRG L+ G++ + F G+ GF+ Sbjct: 1 MIKKYLSRLLVGVTALVAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ + AL + + D++ T R +L L F Sbjct: 61 VDILKAMAKSMGVKFEAVS---TAYDGIIPALLTDKFDMIGSGMTLTQER--NLRLNFSE 115 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K+ I S L+ + + TT E+ + Sbjct: 116 PFIVVGQTLLIRKELAGEIKSYKDLNNEKYRLTSKLGTTGEMVSKKLISKAKYHG----Y 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +E + DA+ D + L + + PLA + +GD + Sbjct: 172 DNEQEAVMDVVNGKADAFVYDAPYNVVAVEKAGAGK-LLFLEEPFTYEPLAFGLKKGDYD 230 Query: 237 WYNIVSWTHY 246 N ++ + Sbjct: 231 SINFINNFLH 240 >gi|154487060|ref|ZP_02028467.1| hypothetical protein BIFADO_00898 [Bifidobacterium adolescentis L2-32] gi|154084923|gb|EDN83968.1| hypothetical protein BIFADO_00898 [Bifidobacterium adolescentis L2-32] Length = 280 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 87/220 (39%), Gaps = 9/220 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + G ++ GI G NG + GFDVD + ++ + +I + +K+R Sbjct: 35 ETGKIRIGIKFDQPGLGFK-KNGTYVGFDVDVAKYVAKKLGYSEDEIVWKESPSKQREAM 93 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150 LQ+ +D + + T R+ + F + GQ ++ K + I L+G +C Sbjct: 94 LQNGDVDYIVASYSITDERKKV--VDFAGPYFVAGQDLLVRKDETGIDGPKDLNGKRLCS 151 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 GTT+ + + + F + + + E A + DA T D L L + Sbjct: 152 MTGTTSAVNVKEKFAK---QTQLMEQPGMAECATALLSGIVDAATTDDIILAGLASASR- 207 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 ++ ++ + +G+TE N ++ M+ Sbjct: 208 -GRLRVVGKPFTQEYYGIGVKKGNTELKNKINNAITDMIQ 246 >gi|225076270|ref|ZP_03719469.1| hypothetical protein NEIFLAOT_01310 [Neisseria flavescens NRL30031/H210] gi|224952394|gb|EEG33603.1| hypothetical protein NEIFLAOT_01310 [Neisseria flavescens NRL30031/H210] Length = 267 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 90/259 (34%), Gaps = 16/259 (6%) Query: 1 MYKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++ C + NAS D + G N F + + G +G Sbjct: 3 MKKWLATALACSALALTACGGQSNNASTPAD----KVYRVGSNAEFAPFESLDSAGKVEG 58 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD A++ A K+++ + F +L + +DI+ T + + F Sbjct: 59 FDVDLMDAMAKA---GNFKVEFKHQPWESLFPSLNNGDVDIVMSGVTITD--DRKQSMLF 113 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + Q ++ K K ++S L + V G T + +++ N FE Sbjct: 114 SDPYFEITQVVLVPKGKKVASSEDLKNMAKVGVVTGYTGDFSVSKLLG--NDNPKIARFE 171 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTE 236 V I D+ D + + N + + + LPD + A +GD Sbjct: 172 SVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGLDFISLPD-FTIENYGIAARKGDEA 230 Query: 237 WYNIVSWTHYAMVTAEELG 255 +++ + + E Sbjct: 231 TIKMLNDALKKVRESGEYD 249 >gi|46908483|ref|YP_014872.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes str. 4b F2365] gi|226224858|ref|YP_002758965.1| amino acid ABC transporter, permease protein [Listeria monocytogenes Clip81459] gi|254825186|ref|ZP_05230187.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL J1-194] gi|254931637|ref|ZP_05264996.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes HPB2262] gi|254992059|ref|ZP_05274249.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL J2-064] gi|255519729|ref|ZP_05386966.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL J1-175] gi|46881754|gb|AAT05049.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria monocytogenes serotype 4b str. F2365] gi|225877320|emb|CAS06034.1| Putative amino acid ABC transporter, permease protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293583191|gb|EFF95223.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes HPB2262] gi|293594430|gb|EFG02191.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL J1-194] gi|328465831|gb|EGF37019.1| amino acid ABC transporter, permease protein [Listeria monocytogenes 1816] gi|328472142|gb|EGF43017.1| amino acid ABC transporter, permease protein [Listeria monocytogenes 220] Length = 486 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 102/279 (36%), Gaps = 24/279 (8%) Query: 1 MYKDFFVSILCLIILF---------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K I ++++F + T L I+++G L G++ + Sbjct: 1 MQKHLLQKIAAILLVFIVVFSGFTTVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K++ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLEIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F F Q ++ K K +SV+ SG + Q TT E + Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 174 --VGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKE-T 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQKEANKLM 269 >gi|66043568|ref|YP_233409.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae B728a] gi|63254275|gb|AAY35371.1| extracellular solute-binding protein, family 3 [Pseudomonas syringae pv. syringae B728a] Length = 261 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 89/249 (35%), Gaps = 11/249 (4%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + +A+ L D+ RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + F Sbjct: 61 DIDTAQLLADKL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + ++ L G +I V G ++ L++ FE Sbjct: 116 RAYAPFYLAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSNVAPE---GATIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A ++ P + + SP+ + +G E Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVA--ISERNPKRIPAMKVKLKDSPVYVGVNKGQPELLG 230 Query: 240 IVSWTHYAM 248 V+ A Sbjct: 231 KVNEILNAA 239 >gi|328956821|ref|YP_004374207.1| putative ABC transporter [Carnobacterium sp. 17-4] gi|328673145|gb|AEB29191.1| putative ABC transporter [Carnobacterium sp. 17-4] Length = 274 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 92/255 (36%), Gaps = 18/255 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTN----------ASILGDIKKRGFLKCGINTGLVGFAEVK 51 K + ++ + + LF ++ T+ +L ++ G LK G+ + + Sbjct: 3 KKKWMLAGIAAVALFVSACGTSTKEDATSTEGGDLLQSVQDAGVLKVGVMGTYQPYNFIN 62 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + D GFD D + ++ + D I+++ LQ+ + D+++ T R+ Sbjct: 63 EDKDMDGFDADIAKEIAKGLDVD---IEFVSQEFSGMIAGLQTGKFDMVASQMTITDDRK 119 Query: 112 ISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + F + + + I+SV G I V GT E L + + Sbjct: 120 KEM--LFSDPYITNQVKVIVKDDNTEITSVEDFVGKDIGVGLGTNDETYLRNELMPEVGE 177 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 ++ ++ V + R DA ++ AL + + + + I A+ Sbjct: 178 FNIRTYDDVITSLKDLDSGRIDATINNMYALKPII--EANGLKIKAVGEPIKSDQAGIAV 235 Query: 231 IQGDTEWYNIVSWTH 245 G+ + V+ Sbjct: 236 QLGNEAFIEEVNTIL 250 >gi|255026707|ref|ZP_05298693.1| hypothetical protein LmonocytFSL_10867 [Listeria monocytogenes FSL J2-003] Length = 486 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 104/279 (37%), Gaps = 24/279 (8%) Query: 1 MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I+ F+ + T L I+++G L G++ + Sbjct: 1 MQKHLLQKFAAILLVFIVVFSGFTSVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F F Q ++ K K +SV+ SG + Q TT E + Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 174 --VGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKE-T 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKEYQKEANKLM 269 >gi|294102238|ref|YP_003554096.1| extracellular solute-binding protein family 3 [Aminobacterium colombiense DSM 12261] gi|293617218|gb|ADE57372.1| extracellular solute-binding protein family 3 [Aminobacterium colombiense DSM 12261] Length = 258 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 96/259 (37%), Gaps = 16/259 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + IL +I+ + + A+ + R ++ G F + G+D Sbjct: 1 MLKTSKIFILSVIMSLIVAAPSLAA--KSVMDRTVIRVGTEATYPPFEYRSEKNEIVGYD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + D ++ + ++ AL + +ID+++ T R + F Sbjct: 59 IDVVKALGAHLGKD---VELVDMSFDGLIPALLTGKIDMIAAGMTNTEERRK--KVDFSD 113 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y F+ IS + L+ VQ GT ++ + + + F++ Sbjct: 114 VYYEIENAFVTKSDDESISKIEDLADKVATVQIGTAQDIFITNT----KLPKEIKRFQKN 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK----SPLAPAIIQGDT 235 ++ R D +++ A ND + + +A AI +GDT Sbjct: 170 DDALREVLLGRSDFCVVNLTVANAYLRNNDAFGSTLKIAFRNFIHKQGEGIALAIPKGDT 229 Query: 236 EWYNIVSWTHYAMVTAEEL 254 + ++ M + EL Sbjct: 230 TFQEALNKVLDEMKKSGEL 248 >gi|94309635|ref|YP_582845.1| extracellular solute-binding protein [Cupriavidus metallidurans CH34] gi|93353487|gb|ABF07576.1| putative amino-acid-binding periplasmic abc transporter protein [Cupriavidus metallidurans CH34] Length = 282 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 11/223 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + DIK +G L CG+ F+ V + G+DVD C A++ ++ P + Sbjct: 31 DQIADIKAKGQLVCGVLGTDEPFSFVDPATREIVGYDVDMCNAVAKSLGVKP---VLKQI 87 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R LQ +D+L+ + RE + F T+ GQ ++ K+ GI+++ QL Sbjct: 88 SVAARLPELQQGHVDLLAASLTHNKERES--QIDFSLSTFITGQKAMVRKESGITTLGQL 145 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G I G+T E +A K + F+ + A + AY D ++L + Sbjct: 146 DGKKILTVKGSTMESNIAAKIK----NATVVSFDNSPQALLALEQGKGVAYVNDETSLVS 201 Query: 204 LKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + ++ ++P +S LA I +G+T + N V+ Sbjct: 202 NLVKLGPAAKDYTLVPQYLSSEHLALGIRKGETGFRNQVNQVL 244 >gi|330955266|gb|EGH55526.1| extracellular solute-binding protein [Pseudomonas syringae Cit 7] Length = 281 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 86/257 (33%), Gaps = 20/257 (7%) Query: 2 YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S + L++ + L IK G L G+ F+ V +G GF+ Sbjct: 7 RRTFLFSAMGLMLNAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + + P AL SK++D++ + R+ + Sbjct: 67 VEFSEALAKELGVKA---KIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSEPY 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174 + + I + + L+G + + + ++ E L + P+ Sbjct: 124 TVSGIQALVLKTNEDKIKTATDLTGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFED 183 Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 ++ R DA + L K D+ + + + + P + Sbjct: 184 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGEPLYEEPNS 240 Query: 228 PAIIQGDTEWYNIVSWT 244 AI + D EW V Sbjct: 241 VAIEKDDPEWDAKVRQV 257 >gi|265984043|ref|ZP_06096778.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13] gi|264662635|gb|EEZ32896.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13] Length = 265 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 85/254 (33%), Gaps = 18/254 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + + + S + + + ++ L G F +K +G GFD Sbjct: 1 MKRIAMATSVAALAITVGSMAAG---VANAEEPLKLTIGTEGAYPPFNFIKPDGTLSGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RAL + +K +++ + ALQS + D + T R+ + F Sbjct: 58 VDIARALCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFIASMSITDERKK--QVDFTN 112 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G K I + L+G +I VQ TT A+Y + + Sbjct: 113 KYYNTPPGIAAPKDTDIKGVTKEDLAGKTIGVQGSTTH----ANYSEKTYTDSTIKSYPT 168 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP----AIIQGD 234 EE R DA D L + D +I P AI +G Sbjct: 169 AEEYRLDLANGRLDAVNDDSVTLVEWLKSPDGACCKMIGTFPPVTEIHGPGAGIAIKKGR 228 Query: 235 TEWYNIVSWTHYAM 248 E + A+ Sbjct: 229 PELVAKFNAAIKAI 242 >gi|315605387|ref|ZP_07880430.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315312956|gb|EFU61030.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 299 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 101/251 (40%), Gaps = 14/251 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 TS IK+ G + GI + F + A+G G+DV + +++ + Sbjct: 38 SATSAQVGDRSPEQIKEAGEIVIGIFSDKAPFGYIDADGKPAGYDVVYGDRIAADLGVTA 97 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +Y+P++A R L S ++DI N T R + F + G + Sbjct: 98 ---KYVPVDAAARTEVLASNKVDITLANFTVTPERAE--KVDFANPYFKVSLGVVSPSSA 152 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ V QL+G ++ V GTT E F+A++ + +++ + A R DA++ Sbjct: 153 EITDVGQLAGKTLIVTKGTTAEAY----FEANHPEVKLQKYDQYSDAYQALEDGRGDAFS 208 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + + A + P V + + S +A A+ +G+ + ++ + E Sbjct: 209 TDNTEVIAWAIA--HPGFSVGIKSLGETSYIAAAVKKGNAPLLDWLNNQLTEL---GEEN 263 Query: 256 ITQKNINQVSK 266 K+ Q Sbjct: 264 FFHKDYEQTLA 274 >gi|291295430|ref|YP_003506828.1| extracellular solute-binding protein family 3 [Meiothermus ruber DSM 1279] gi|290470389|gb|ADD27808.1| extracellular solute-binding protein family 3 [Meiothermus ruber DSM 1279] Length = 247 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 84/265 (31%), Gaps = 22/265 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V + L+ L S + S L +++ G L G + F + N GFD Sbjct: 1 MRKGIVVMV--LVGLLGVSGALAQSCLANVRANG-LTVGTSPDYPPFESLDKNNKIIGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + + + ++ + AL +K+ID+++ T R+ + F Sbjct: 58 VDLLNLIGAELGVK---VNFIGQSFDGLIPALLTKKIDLIAAGLTITEERKK--SVDFTR 112 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I K+ IS + L+G + VQ G+ E + A + Sbjct: 113 PYISGPNVIITRKETTGISKLEDLAGKKVAVQIGSAQEKIASGVKGA-----EVKSYNLY 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A + DA A L + + A+ + ++ Sbjct: 168 TDAALAVNTRQADALIVHRFVGRAFLKQYPDLKIVAELNQVDT----GLALRKECSDL-- 221 Query: 240 IVSWTHYAMVTAEELGITQKNINQV 264 A + E + Sbjct: 222 --RRAIDAAIEKLEKNGKMDELAAK 244 >gi|167815972|ref|ZP_02447652.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 91] Length = 264 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 85/252 (33%), Gaps = 19/252 (7%) Query: 1 MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K V+ L + F + + A +L ++K+RG L+ G+ F G+ Sbjct: 1 MKIASLKKLLVTGL-IGASFAAATAHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGEL 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD +A+++ + P ++ LQ+ + D++ T R+ L Sbjct: 60 VGFDVDIAKAIAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDPRK--QTL 114 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F P F I K S+ L G + V GT Sbjct: 115 DFSPAYTFSSAQLIQRKDDARQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVK 169 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E A R DA D L L P ++ S +P +G+ Sbjct: 170 TYPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNAQLP--LRPGANVGSANPSGIPFKKGN 227 Query: 235 TEWYNIVSWTHY 246 ++ ++ Sbjct: 228 PKFAKAIADAMT 239 >gi|322516340|ref|ZP_08069266.1| polar amino acid uptake ABC superfamily ATP binding cassette transporter substrate binding protein [Streptococcus vestibularis ATCC 49124] gi|322125178|gb|EFX96567.1| polar amino acid uptake ABC superfamily ATP binding cassette transporter substrate binding protein [Streptococcus vestibularis ATCC 49124] Length = 290 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 36/253 (14%), Positives = 81/253 (32%), Gaps = 17/253 (6%) Query: 1 MY--KDFFVSILCLIILF-FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANG 54 M K + + L + S++ L ++ +G L +N F Sbjct: 21 MKTWKKLLLGFAGIFALTTLAACSSSKDTLEKVQDKGTLTVALNPHFAPFEFKIIQDGKD 80 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D++ +A+ + +++ ++ ++QS + DI T R+ Sbjct: 81 TIAGADIEIAKAIGDELGVK---VKFSEMSFDNVLASVQSGKADIAISGISATKERQKI- 136 Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y ++ K + S+ VQ G+ E K++ + Sbjct: 137 -FDFSDTYYESETVLVVKKDATGTYKQTGDFAKKSVSVQKGSIQESI----AKSNLSDAN 191 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + + E ++ + + + + N+ + I SK A A+ + Sbjct: 192 VVSLAQPGEAINELKSGQVEGVVLEKAIAQGYIEQNNDLAVSDIALKSDSKDAYAVAMPK 251 Query: 233 GDTEWYNIVSWTH 245 G + V+ Sbjct: 252 GSDKLKAKVNKVI 264 >gi|260566496|ref|ZP_05836966.1| extracellular solute-binding protein family 3 [Brucella suis bv. 4 str. 40] gi|261752264|ref|ZP_05995973.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5 str. 513] gi|261754923|ref|ZP_05998632.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3 str. 686] gi|260156014|gb|EEW91094.1| extracellular solute-binding protein family 3 [Brucella suis bv. 4 str. 40] gi|261742017|gb|EEY29943.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5 str. 513] gi|261744676|gb|EEY32602.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3 str. 686] Length = 265 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 85/254 (33%), Gaps = 18/254 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + + + S + + + ++ L G F +K +G GFD Sbjct: 1 MKRIAMATSVAALAITVGSMAAG---VANAEEPLKLTIGTEGAYPPFNFIKPDGTLSGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RAL + +K +++ + ALQS + D + T R+ + F Sbjct: 58 VDIARALCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFIASMSITDERKK--QVDFTN 112 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G K I + L+G +I VQ TT A+Y + + Sbjct: 113 KYYNTPPGIAAPKDTDIKGVTKEDLAGKTIGVQGSTTH----ANYSEKTYTDSTIKSYPT 168 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP----AIIQGD 234 EE R DA D L + D ++ P AI +G Sbjct: 169 AEEYRLDLANGRLDAVNDDSVTLAEWLKSPDGACCKMVGTFPPVTEIHGPGAGIAIKKGR 228 Query: 235 TEWYNIVSWTHYAM 248 E + A+ Sbjct: 229 PELVAKFNAAIKAI 242 >gi|307319173|ref|ZP_07598603.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] gi|306895280|gb|EFN26036.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] Length = 266 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 42/244 (17%), Positives = 81/244 (33%), Gaps = 12/244 (4%) Query: 3 KDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + +S+LC L S A + IK G +K G+ F + AN G+D Sbjct: 5 RRMAISVLCAAALVAGLVSPVAAQTVEVIKSAGTVKVGMLVDFPPFGIMDANNQPDGYDA 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L+ + + + +P+ R LQS Q+D+L + T R + F Sbjct: 65 DVAKLLAKELGVE---VTIVPVTGPNRIPYLQSNQVDLLVASLGITEERAK--NVDFSQP 119 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G ++ L+G +I V +T + + + F+ Sbjct: 120 YAGISIGVFGAADLAVTKPEDLAGKTIGVARASTQDTAVTKIAPQ---DANIQRFDDDAS 176 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + + + ++ + +S+ A+ +G E V Sbjct: 177 AVQALLSGQVELIGVSNVVAAQIEAAAPGRFNQKL---QLSQQVQGIAVRKGSNEMLKFV 233 Query: 242 SWTH 245 + Sbjct: 234 NGFL 237 >gi|238064114|ref|ZP_04608823.1| glutamate binding protein [Micromonospora sp. ATCC 39149] gi|237885925|gb|EEP74753.1| glutamate binding protein [Micromonospora sp. ATCC 39149] Length = 281 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 86/253 (33%), Gaps = 12/253 (4%) Query: 1 MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M +++ L S + ++ + + G+ + +G Sbjct: 1 MRVTRAAAVVVFATLSLIPGSCGRGDSGPDVIEKAAETKTITIGVIPNQPNLSLK-TDGT 59 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFDV+ + ++ + DP+ IQ+ +R ++ +D++ R+ + Sbjct: 60 YVGFDVEIGKIVAKGLGVDPANIQWKDTTVPDRERVIKDGTVDLVVATYTINDARKKEIR 119 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y GQ ++ I L G +C AG+T A ++ K Sbjct: 120 --FAGPYYVAGQDLLVKANSTIKGPEDLEGKVVCSSAGSTP----AKRIRSQYPKTRLQQ 173 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ + DA T D L + + + ++ + S+ P + + D Sbjct: 174 YDQESRCLPDLESGAIDAVTTDNVVLLGYSMRPENAGKFKLVGNTFSEEPYGIGMKKRDR 233 Query: 236 EWYNIVSWTHYAM 248 ++ A Sbjct: 234 ASCEKINEILQAA 246 >gi|254391810|ref|ZP_05007005.1| glutamate binding periplasmic protein [Streptomyces clavuligerus ATCC 27064] gi|294815492|ref|ZP_06774135.1| glutamate binding protein [Streptomyces clavuligerus ATCC 27064] gi|326443843|ref|ZP_08218577.1| glutamate binding periplasmic protein [Streptomyces clavuligerus ATCC 27064] gi|197705492|gb|EDY51304.1| glutamate binding periplasmic protein [Streptomyces clavuligerus ATCC 27064] gi|294328091|gb|EFG09734.1| glutamate binding protein [Streptomyces clavuligerus ATCC 27064] Length = 276 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 80/249 (32%), Gaps = 14/249 (5%) Query: 1 MYKDFFVSILC---LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + + L T+ A + GI G G++ Sbjct: 4 MKLRKASLAIATGLALSLTLTACGGGAGSDDS-----KIVIGIKFDQPGIGLKTPEGNFT 58 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DVD ++ + + I++ + +R +++ + ++ + R+ + Sbjct: 59 GLDVDVATYVAKELGYEAKDIEWKQAPSADRETLIRNGDVKFVAASYTINDKRKA--EVD 116 Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + Q ++ I+ V L+ +C G+T+ + D + Sbjct: 117 FAGPYFLAHQDLLVRADDNSITKVEDLNKKKLCSVRGSTSAQNVKD---KRVPGADLQQY 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E DA T D + L + + +L +S+ P + +GD E Sbjct: 174 GGYSECLTGLENKAVDALTTDDAILAGYASQKEHQGKFKLLGLKLSEEPYGIGLKKGDKE 233 Query: 237 WYNIVSWTH 245 + ++ Sbjct: 234 LRDKINKAL 242 >gi|254899048|ref|ZP_05258972.1| hypothetical protein LmonJ_04529 [Listeria monocytogenes J0161] gi|254912811|ref|ZP_05262823.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254937138|ref|ZP_05268835.1| arpJ [Listeria monocytogenes F6900] gi|284802697|ref|YP_003414562.1| hypothetical protein LM5578_2453 [Listeria monocytogenes 08-5578] gi|284995839|ref|YP_003417607.1| hypothetical protein LM5923_2404 [Listeria monocytogenes 08-5923] gi|258609741|gb|EEW22349.1| arpJ [Listeria monocytogenes F6900] gi|284058259|gb|ADB69200.1| hypothetical protein LM5578_2453 [Listeria monocytogenes 08-5578] gi|284061306|gb|ADB72245.1| hypothetical protein LM5923_2404 [Listeria monocytogenes 08-5923] gi|293590807|gb|EFF99141.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length = 486 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 104/279 (37%), Gaps = 24/279 (8%) Query: 1 MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I+ F+ + T L I+++G L G++ + Sbjct: 1 MQKHLLQKFAAILLVFIVVFSGFTSVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F F Q ++ K K +SV+ SG + Q TT E + Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 174 --VGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKE-T 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQKEANKLM 269 >gi|294102162|ref|YP_003554020.1| extracellular solute-binding protein family 3 [Aminobacterium colombiense DSM 12261] gi|293617142|gb|ADE57296.1| extracellular solute-binding protein family 3 [Aminobacterium colombiense DSM 12261] Length = 256 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 87/247 (35%), Gaps = 14/247 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + ++L + + ++ + G + F G GFD Sbjct: 1 MKKSVVLVMFFALLLGVVGGPAFGAG--SVMEKDTVIIGTSGSYPPFEFHDKTGALVGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + ++ + +L + +ID+++ T R S +AF Sbjct: 59 IDLANEVVARLGKKAE---WVDMAFDGVIPSLLTGKIDMIAACLSITEER--SKKVAFST 113 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F+++K ++++ L G ++ VQ GTT ++ +++ F ++ Sbjct: 114 PYMVSLSAFVLNKDSGEMATLEDLKGKTVAVQLGTTQDVYISEV-----EGVTVKQFPKL 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA D + + + + + + A A+ Q D + Sbjct: 169 NDAVREVTLKRADASLMDETVAETYINSEEFKGQLKKSFTVELKGAKQALAVSQNDPAFL 228 Query: 239 NIVSWTH 245 V+ Sbjct: 229 EAVNKIV 235 >gi|254826861|ref|ZP_05231548.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL N3-165] gi|258599240|gb|EEW12565.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL N3-165] Length = 486 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 104/279 (37%), Gaps = 24/279 (8%) Query: 1 MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I+ F+ + T L I+++G L G++ + Sbjct: 1 MQKHLLQKFAAILLVFIVVFSGFTSVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F F Q ++ K K +SV+ SG + Q TT E + Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 174 --VGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKE-T 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQKEANKLM 269 >gi|320529942|ref|ZP_08031019.1| putative glutamine ABC transporter periplasmic protein [Selenomonas artemidis F0399] gi|320137960|gb|EFW29865.1| putative glutamine ABC transporter periplasmic protein [Selenomonas artemidis F0399] Length = 258 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 80/258 (31%), Gaps = 14/258 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKK-RGFLKCGINTGLVGFAEVKA-NGDWKG 58 M I +L S K+ L+ G F +++G Sbjct: 1 MKLKKLAMIFTGTLLSLAMVGCGGSSGDQAKQEAKVLRVGATIDFAPFEFQDEGQKEYQG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D RA++ + + + ALQ+K ID++ R+ + F Sbjct: 61 FDMDLIRAIAKEMGREAE---IQNIGFDGLIPALQAKNIDVIISGMTINDERKE--KVNF 115 Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G ++ + I S + L G + Q GTT+ L + + Sbjct: 116 SAPYYQSGLTMVVRSDEEAIKSFNDLKGHKVAAQIGTTSANMLKE-----QEGITVLELN 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + +A DA D + + L D++S AI + +TE Sbjct: 171 TPADCFMELKARGVDAVVNDRPVN-DYYINQTQAVGVKSLSDMLSAEEYGIAISKDNTEL 229 Query: 238 YNIVSWTHYAMVTAEELG 255 + + E Sbjct: 230 QKEIDAALKKLHDNGEYD 247 >gi|270263422|ref|ZP_06191691.1| hypothetical protein SOD_e00460 [Serratia odorifera 4Rx13] gi|270042306|gb|EFA15401.1| hypothetical protein SOD_e00460 [Serratia odorifera 4Rx13] Length = 263 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 93/244 (38%), Gaps = 10/244 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +K V+ L ++L + S A L +I++RG L+ + F V + +G+D+ Sbjct: 3 FKKIGVATLGAVLLMAQAASAMADQLQEIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D L+ + K+Q +P+ + R LQ+ ++D++ + RE ++ F Sbjct: 63 DMAHYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREKTIA--FSRA 117 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G K+ + +QL G ++ V G ++ L+D +E Sbjct: 118 YAPFFLGVFGPKEAVLGDAAQLDGKTVGVTRGAVEDMVLSDTAPK---GAQIKRYEDNNT 174 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +AY + + L + P++ + ++ SP + G+ V Sbjct: 175 TLSAYLSGQVQYIATGN--LVVSAIARQNPTKAPVAKFMLKDSPCFVGLRLGEPALKAKV 232 Query: 242 SWTH 245 Sbjct: 233 DELI 236 >gi|221069888|ref|ZP_03545993.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] gi|220714911|gb|EED70279.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] Length = 320 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 97/277 (35%), Gaps = 26/277 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA----------------------SILGDIKKRGFLKC 38 M K + L ++ S L + G + Sbjct: 1 MGKSLKWAGLAAALVCAGSAMAAGKTEAASSTIGANIDTAVELSASPTLQRWQAGGTVVL 60 Query: 39 GINTGLVGFAE-VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 G+ V + + AN + G+ +D C + AI ++++Y+ L + + + Sbjct: 61 GVREAAVPMSYAIGANEKFVGYHMDLCERVVHAI-APRAQLRYMVLTPQNTMPLINNGTA 119 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 D + L R+ + F TY + GI+S QL G ++ GTT Sbjct: 120 DFNCASMTNNLTRQKQVA--FGLTTYVSEVRMAVRADSGITSFKQLQGRNVGAITGTTAV 177 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 L Y + + + ++ + E + R DA+ D + L + + P + I+ Sbjct: 178 QILRKYASDNELNFKTLMSKDQLESFLMLESGRVDAFVLDDNMLAGVIGQSKNPKGYKIV 237 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 ++I P+A + D + V M+ + EL Sbjct: 238 GEVIGAEPIAIQFSKNDPQIKKAVDGAILQMIRSGEL 274 >gi|330900038|gb|EGH31457.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] gi|330977255|gb|EGH77211.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 261 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 89/261 (34%), Gaps = 11/261 (4%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + +A+ L D+ RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + F Sbjct: 61 DIDTAQLLADKL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + ++ L G +I V G ++ L+ FE Sbjct: 116 RAYAPFYLAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSKVAPE---GAVIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A ++ P L + SP+ + +G E Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLG 230 Query: 240 IVSWTHYAMVTAEELGITQKN 260 V A L + Sbjct: 231 KVDEILNAAKADGSLEKASQT 251 >gi|291457470|ref|ZP_06596860.1| glutamate-binding protein [Bifidobacterium breve DSM 20213] gi|291381305|gb|EFE88823.1| glutamate-binding protein [Bifidobacterium breve DSM 20213] Length = 279 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 89/239 (37%), Gaps = 17/239 (7%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 + + + G ++ GI G +G + GFDVD + ++ + Sbjct: 23 CTMSLAACGQDEP--------GKIRIGIKFDQPGLGFK-KSGTYVGFDVDVAKYIAKKLG 73 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +I + +K+R +Q+ +D++ T R+ ++F + GQ ++ Sbjct: 74 YSEDEIIWKEAPSKQREAMIQNGDVDMILATYSITDERKK--AVSFAGPYFVAGQDLLVR 131 Query: 133 KKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 K I+ L+G +C G+T+ T+ + F + + + E A + Sbjct: 132 KDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFAS---EVQLMEQPGYAECATALFSGIV 188 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 DA T D L L + ++ ++ I +G+T+ ++ M+ Sbjct: 189 DAVTTDDIILAGLASASRGK--LKVVGKPFTQEYYGVGIKKGNTQLATKINNAIVDMIQ 245 >gi|227819409|ref|YP_002823380.1| ABC transporter substrate-binding protein [Sinorhizobium fredii NGR234] gi|227338408|gb|ACP22627.1| putative substrate-binding component of ABC transporter [Sinorhizobium fredii NGR234] Length = 298 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 54/233 (23%), Positives = 93/233 (39%), Gaps = 4/233 (1%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 +S L ++ RG L G + + A +GFDVD R ++ A+F DP KI+Y+ Sbjct: 45 SSKLDEVLARGHLILGTGSTNAPWHFKSAEDKLQGFDVDMGRIIAKALFGDPDKIEYVNQ 104 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 ++ R + + ++D+ + T R + +AF Y +G G +M + + L Sbjct: 105 SSDARIPNITTDKVDLTCQFMTVTGER--AQQIAFTIPYYREGVGLMMKADGKYADYAAL 162 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 A V + D A + +E V+ I A + R DA D S+L Sbjct: 163 KAAGSSVTISVLQNVYAEDMVHAALPEATVDQYESVDLIYQALESGRADAAATDQSSLAW 222 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 P + + A + +GD +W N V+ + +T E Sbjct: 223 YMTQ--NPGRYKDAGYGWNPQTYACGVKRGDQDWLNFVNTALHEAMTGVEFDF 273 >gi|329908117|ref|ZP_08274833.1| ABC transporter amino acid-binding protein [Oxalobacteraceae bacterium IMCC9480] gi|327546758|gb|EGF31695.1| ABC transporter amino acid-binding protein [Oxalobacteraceae bacterium IMCC9480] Length = 255 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 88/250 (35%), Gaps = 15/250 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F + +L + A L +IK G L F + + GF+ Sbjct: 1 MKRFLFAFSVITGLLL--GPAVQARSLDEIKSAGTLIVATEGAYPPFNYFQGS-KLSGFE 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A+ + KI++ L+ L+ + D++ + T R S + F Sbjct: 58 VELAEAMVKKMG---LKIEWKALSFDALLAGLRQDRWDMVMASFGVTEER--SKAVLFTS 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + G I+ K I + L+G ++ VQ G+T + F + Sbjct: 113 PY-YCSGGVIVSKDAAIKDAATLTGKTVAVQTGSTYMENVKKLAGVK----EVKNFPQDT 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + +A A R DA+ D T P + + + + +A A+ +G+ Sbjct: 168 DARSALVAGRVDAWVSDR--FVVKTATESNPGLGLKVGEYLFVERIAAAVKKGNAPLAAA 225 Query: 241 VSWTHYAMVT 250 V ++ Sbjct: 226 VDKALAEVIA 235 >gi|26991700|ref|NP_747125.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas putida KT2440] gi|24986801|gb|AAN70589.1|AE016701_9 amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas putida KT2440] gi|313501000|gb|ADR62366.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas putida BIRD-1] Length = 266 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 88/250 (35%), Gaps = 14/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + + A + D KRG L+ G++ + F G+ GF+ Sbjct: 1 MIKKYLSRLLVGVTALVAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ + AL + + D++ T R +L L F Sbjct: 61 VDILKAMAKSMGVKFEAVS---TAYDGIIPALLTDKFDMIGSGMTLTQER--NLRLNFSE 115 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K+ I S L+ + + TT E+ + Sbjct: 116 PFIVVGQTLLIRKELAGEIKSYKDLNNEKYRLTSKLGTTGEMVSKKLISKAKYHG----Y 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +E + DA+ D + L + + PLA + +GD + Sbjct: 172 DNEQEAVMDVVNGKADAFVYDAPYNVVAVDKAGAGK-LLFLDEPFTYEPLAFGLKKGDYD 230 Query: 237 WYNIVSWTHY 246 N ++ + Sbjct: 231 SINFINNFLH 240 >gi|224498994|ref|ZP_03667343.1| hypothetical protein LmonF1_04543 [Listeria monocytogenes Finland 1988] gi|254831313|ref|ZP_05235968.1| hypothetical protein Lmon1_08142 [Listeria monocytogenes 10403S] Length = 486 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 104/279 (37%), Gaps = 24/279 (8%) Query: 1 MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I+ F+ + T L I+++G L G++ + Sbjct: 1 MQKHLLQKFAAILLVFIVVFSGFTSVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F F Q ++ K K +SV+ SG + Q TT E + Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 174 --VGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKE-T 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKEYQKEANKLM 269 >gi|86357908|ref|YP_469800.1| amino acid ABC transporter substrate-binding protein [Rhizobium etli CFN 42] gi|86282010|gb|ABC91073.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 274 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 86/255 (33%), Gaps = 12/255 (4%) Query: 2 YKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F L + +A+ + +IK +G + GI + V ++G GFD Sbjct: 5 RRQFLGMALATAAFATVGAAVASAATVEEIKAKGTIVVGIQGDNAPWGFVDSSGKQDGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D + + +Q+ PL R AL + ++DIL T R + + Sbjct: 65 ADVATLFAKELGVK---VQFQPLAVANRIPALTTGKVDILFATMAMTEERAK--SIQYSK 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + K + + ++G I V ++ + + D A F+ Sbjct: 120 PYAANTISLYAAKADTAKTPADVAGWEIGVPKSSSQDKAITD---AVGSTATVRRFDDDA 176 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + + A G++ Y +L P + D ++ G+ +W Sbjct: 177 STIQALVSGQVKAVGGNM--FYGQRLDAASPGTYERKIDFLTT-YNGVGTRLGEKDWNEA 233 Query: 241 VSWTHYAMVTAEELG 255 V+ + EL Sbjct: 234 VNAFLDKIKANGELA 248 >gi|227510178|ref|ZP_03940227.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190383|gb|EEI70450.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 283 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 83/256 (32%), Gaps = 16/256 (6%) Query: 2 YKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 K V + L++ + TN + K+ + G++ V + Sbjct: 6 KKCPLVIVTLLLMFVLSGCRFESRQKMETNPDTWSIVSKQKKIVIGLDDSFVPMGFETKS 65 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G G+DVD +A+ K+ + P++ L++ ID++ R Sbjct: 66 GKIVGYDVDLAKAVFKQYG---IKVDFQPIDWSMNVTELRNGTIDLIWNGFSMNPQRAK- 121 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH- 172 + F + Q I KK I+S + + VQAG+ + + K + Sbjct: 122 -KVTFSEPYLVNKQVLISKKKNHINSFADMKNRVAGVQAGSAGAMDIDSQPKLLKDRIKN 180 Query: 173 --PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 PI+++ E + R D + + +P K + Sbjct: 181 HTPILYDSFTEAFIDLNSDRIQGLLIDSIYAGYYIGHQRNRATYQSVPSQFPKEYYGVGM 240 Query: 231 IQGDTEWYNIVSWTHY 246 +GDT+ + Sbjct: 241 RKGDTKLKQKIDAGLN 256 >gi|319638612|ref|ZP_07993374.1| histidine-binding protein [Neisseria mucosa C102] gi|317400361|gb|EFV81020.1| histidine-binding protein [Neisseria mucosa C102] Length = 270 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 88/257 (34%), Gaps = 12/257 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ C + + + + G N F + + G +GFD Sbjct: 3 MKKWLATALACSALALTACGGQSNN--ASAPADKVYRVGSNAEFAPFESLDSAGKVEGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ A K+++ + F +L + +DI+ T + + F Sbjct: 61 VDLMNAMAKA---GNFKVEFKHQPWESLFPSLNNGDVDIVMSGVTITD--DRKQSMLFSD 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ K K ++S L + V G T + +++ N FE V Sbjct: 116 PYFEITQVVLVPKGKKVASSEDLKNMAKVGVVTGYTGDFSVSKLLG--NDNPKIARFESV 173 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I D+ D + + N + + + LPD + A +GD Sbjct: 174 PLIIKELENGGLDSVVSDSAVIANYVKNNPTKGLDFISLPD-FTIENYGIAARKGDEATI 232 Query: 239 NIVSWTHYAMVTAEELG 255 +++ + + E Sbjct: 233 KMLNDALKKVRESGEYD 249 >gi|76809564|ref|YP_333374.1| amino acid ABC transporter periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710b] gi|254179931|ref|ZP_04886530.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1655] gi|254261060|ref|ZP_04952114.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710a] gi|254297763|ref|ZP_04965216.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 406e] gi|76579017|gb|ABA48492.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710b] gi|157806758|gb|EDO83928.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 406e] gi|184210471|gb|EDU07514.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1655] gi|254219749|gb|EET09133.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710a] Length = 284 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 85/252 (33%), Gaps = 19/252 (7%) Query: 1 MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K V+ L + F + + A +L ++K+RG L+ G+ F G+ Sbjct: 21 MKIASLKKLLVTGL-IGASFAAATAHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGEL 79 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD +A+++ + P ++ LQ+ + D++ T R+ L Sbjct: 80 VGFDVDIAKAIAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDPRK--QTL 134 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F P F I K S+ L G + V GT Sbjct: 135 DFSPAYTFSSAQLIQRKDDARQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVK 189 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E A R DA D L L P ++ S +P +G+ Sbjct: 190 TYPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNAQLP--LRPGANVGSANPSGIPFKKGN 247 Query: 235 TEWYNIVSWTHY 246 ++ ++ Sbjct: 248 PKFAKAIADAMT 259 >gi|16079454|ref|NP_390278.1| High affinity arginine ABC transporter binding lipoprotein [Bacillus subtilis subsp. subtilis str. 168] gi|221310318|ref|ZP_03592165.1| hypothetical protein Bsubs1_13156 [Bacillus subtilis subsp. subtilis str. 168] gi|221314642|ref|ZP_03596447.1| hypothetical protein BsubsN3_13077 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319565|ref|ZP_03600859.1| hypothetical protein BsubsJ_12998 [Bacillus subtilis subsp. subtilis str. JH642] gi|221323841|ref|ZP_03605135.1| hypothetical protein BsubsS_13127 [Bacillus subtilis subsp. subtilis str. SMY] gi|321311879|ref|YP_004204166.1| High affinity arginine ABC transporter binding lipoprotein [Bacillus subtilis BSn5] gi|1731062|sp|P54535|ARTP_BACSU RecName: Full=Arginine-binding extracellular protein ArtP; Flags: Precursor gi|1303949|dbj|BAA12604.1| YqiX [Bacillus subtilis] gi|2634832|emb|CAB14329.1| High affinity arginine ABC transporter binding lipoprotein [Bacillus subtilis subsp. subtilis str. 168] gi|320018153|gb|ADV93139.1| High affinity arginine ABC transporter binding lipoprotein [Bacillus subtilis BSn5] Length = 255 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 97/255 (38%), Gaps = 11/255 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + I T+ ++ S KK L G + F + + + GFD Sbjct: 1 MKKWLLLLVAACITFALTACGSSNSGSESGKK--KLIMGTSADYKPFEYKEGD-NIVGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ +AL+ + I+ ++ AL+SKQ+D++ T R+ + F Sbjct: 58 VELAKALAKKAGYE---IEVQDMDFNSLITALKSKQVDLVLSGMTPTPERKK--QVDFSD 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y + K GI S+ L G ++ VQ G+ E + + K R+ Sbjct: 113 VYYTANHMIVSKKDSGIQSLKDLKGKTVGVQLGSIQEEKGKELSPEYGFKTEDR--NRIS 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ ++ R DA + ++ + ++PD ++ + + D+E + Sbjct: 171 DLVQEIKSDRFDAAIIEDIVAEGY-FKSNDDLQGFVIPDAKAEEAGSAIAFRKDSELTDK 229 Query: 241 VSWTHYAMVTAEELG 255 + M EL Sbjct: 230 FNKALKEMEDNGELE 244 >gi|119025598|ref|YP_909443.1| glutamate-binding protein of ABC transporter system [Bifidobacterium adolescentis ATCC 15703] gi|118765182|dbj|BAF39361.1| glutamate-binding protein of ABC transporter system [Bifidobacterium adolescentis ATCC 15703] Length = 270 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 87/220 (39%), Gaps = 9/220 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + G ++ GI G NG + GFDVD + ++ + +I + +K+R Sbjct: 25 ETGKIRIGIKFDQPGLGFK-KNGTYVGFDVDVAKYVAKKLGYSEDEIVWKESPSKQREAM 83 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150 LQ+ +D + + T R+ + F + GQ ++ K + I L+G +C Sbjct: 84 LQNGDVDYIVASYSITDERKKV--VDFAGPYFVAGQDLLVRKDETGIDGPKDLNGKRLCS 141 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 GTT+ + + + F + + + E A + DA T D L L + Sbjct: 142 MTGTTSAVNVKEKFAK---QTQLMEQPGMAECATALLSGIVDAATTDDIILAGLASASR- 197 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 ++ ++ + +G+TE N ++ M+ Sbjct: 198 -GRLRVVGKPFTQEYYGIGVKKGNTELKNKINNAITDMIQ 236 >gi|325913427|ref|ZP_08175793.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners UPII 60-B] gi|325477196|gb|EGC80342.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners UPII 60-B] Length = 273 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 83/234 (35%), Gaps = 10/234 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74 + ++ +K+ + G F + + GF++D +A++ + Sbjct: 21 GGCGQAKKVNVYQKVKQSRTMIWGTRADTRLFGYMDIKSSKIIGFEIDMAKAVTKQMLGK 80 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + +++ K R L+++ I+ + T R+ + F G ++ Sbjct: 81 DAVAKFVQTTPKTRIPLLKNRNINAIWATMTITPERKK--QVDFARPYIGAGASLLVPNN 138 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I V QL+ + GTT + + ++ + +A +A + A Sbjct: 139 SKIKDVHQLNNKKVLAVKGTTAVADIKKVAPKAK----VLEYDDYGQAFSALKAGQGVAM 194 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 T D L + + P H ++ + P A+ +G E + ++ A+ Sbjct: 195 TTDNCLLAGIAS--ENPGFH-LIGKNYTNQPYGIAVDKGQAELRDHINKALLAL 245 >gi|313632221|gb|EFR99286.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria seeligeri FSL N1-067] Length = 256 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 93/260 (35%), Gaps = 24/260 (9%) Query: 1 MYKDFFVSILCLIILF---------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K+F + + ++F + L I+++G L G++ + Sbjct: 1 MQKNFLQKLAAIALIFIFVFSGFTTVFAADNQDETLKKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKIVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F F Q ++ K +SV+ +G + Q TT E + Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVVRKADKEKFTSVNDFNGVKVGAQKQTTQEELAQNEL-- 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ +++ DA + A + + I + SK Sbjct: 174 --VGSDVVSLQKVPDLLLNLSSNKVDAVVLEGPVAEAYLSQDKTLAMADIKFENGSKE-T 230 Query: 227 APAIIQGDTEWYNIVSWTHY 246 A A+ +G T V+ + Sbjct: 231 AIALPKGSTALQEKVNASIK 250 >gi|261416888|ref|YP_003250571.1| extracellular solute-binding protein family 3 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373344|gb|ACX76089.1| extracellular solute-binding protein family 3 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327529|gb|ADL26730.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 263 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 88/256 (34%), Gaps = 17/256 (6%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F + ++ + +K G G++ Sbjct: 1 MKKFFAILAAFACAAVLSACNDQKAETKTAADDSFNKVKAAGVFVLGLDDSFPPMGFRDK 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + + GFD+D + + + K++ P++ + L + +ID + R Sbjct: 61 DNNIVGFDIDLATEVCARLG---IKLKTQPISWDAKEQELNTGKIDCIWNGMSVDSDRAR 117 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + L + K K I++++ L+G I VQ G+T + L + +A Sbjct: 118 VMNL--SDAYLKNRM-IFTVKDKAITNLAALAGKKIAVQNGSTAQKLL-ETSEAGKAAKE 173 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + F+ + DA D +TN +P +++L + +S A + Sbjct: 174 IVPFDDNQTALMDLDKGGVDAVFLDEIVAKYWIVTNAKP--YIVLEEGLSDEVYAVGFRK 231 Query: 233 GDTEWYNIVSWTHYAM 248 D + V+ AM Sbjct: 232 KDQALRDSVNNVLDAM 247 >gi|300717207|ref|YP_003742010.1| L-cystine ABC transporter, extracellular solute-binding protein [Erwinia billingiae Eb661] gi|299063043|emb|CAX60163.1| L-cystine ABC transporter, extracellular solute-binding protein [Erwinia billingiae Eb661] Length = 267 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 92/249 (36%), Gaps = 16/249 (6%) Query: 2 YKDFFVSILCLIILFFT---SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 + + + L ++ +F+ + ++L +K+RG L G+ F+ NG G Sbjct: 7 RRRLVMGAVSLALVAGFSVNAFAADENLLSKVKERGSLLVGLEGTYPPFSFQDENGKLAG 66 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VDF AL+ + P +L SK+ID++ + R+ F Sbjct: 67 FEVDFADALAQHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDF 121 Query: 119 RPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 G + K+ IS LSG + V G+ E L +A+ + Sbjct: 122 STPYTISGIQALTKKENAASISKPEDLSGKKVGVGLGSNYEQWL----RANVKGVDIRTY 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + R R +A D L AL L + + S+ A+ +G+T+ Sbjct: 178 DDDPTKYQDLRVGRINAILVDR--LAALDLVKKTGNTLAVAGPAFSRQESGVALRKGNTQ 235 Query: 237 WYNIVSWTH 245 + ++ Sbjct: 236 LLDAINKAI 244 >gi|53719480|ref|YP_108466.1| putative ABC transporter cystine-binding protein [Burkholderia pseudomallei K96243] gi|53723464|ref|YP_102925.1| amino acid ABC transporter periplasmic amino acid-binding protein [Burkholderia mallei ATCC 23344] gi|67640271|ref|ZP_00439084.1| cystine ABC transporter, periplasmic cystine-binding protein [Burkholderia mallei GB8 horse 4] gi|121601368|ref|YP_993059.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei SAVP1] gi|124385440|ref|YP_001026394.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei NCTC 10229] gi|126439839|ref|YP_001058845.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 668] gi|126450875|ref|YP_001080333.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei NCTC 10247] gi|126455413|ref|YP_001066091.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106a] gi|134282256|ref|ZP_01768961.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 305] gi|167003921|ref|ZP_02269700.1| cystine ABC transporter, periplasmic cystine-binding protein [Burkholderia mallei PRL-20] gi|167719753|ref|ZP_02402989.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei DM98] gi|167738748|ref|ZP_02411522.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 14] gi|167845887|ref|ZP_02471395.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei B7210] gi|167894457|ref|ZP_02481859.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 7894] gi|167902858|ref|ZP_02490063.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei NCTC 13177] gi|167911101|ref|ZP_02498192.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 112] gi|167919121|ref|ZP_02506212.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei BCC215] gi|217423617|ref|ZP_03455118.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 576] gi|226196423|ref|ZP_03792005.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pakistan 9] gi|237812103|ref|YP_002896554.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei MSHR346] gi|242315262|ref|ZP_04814278.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106b] gi|254177632|ref|ZP_04884287.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei ATCC 10399] gi|254188664|ref|ZP_04895175.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|254197646|ref|ZP_04904068.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei S13] gi|254199867|ref|ZP_04906233.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei FMH] gi|254206195|ref|ZP_04912547.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei JHU] gi|254358593|ref|ZP_04974866.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei 2002721280] gi|52209894|emb|CAH35866.1| putative ABC transport system, cystine-binding protein [Burkholderia pseudomallei K96243] gi|52426887|gb|AAU47480.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei ATCC 23344] gi|121230178|gb|ABM52696.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei SAVP1] gi|124293460|gb|ABN02729.1| cystine ABC transporter, periplasmic cystine-binding protein [Burkholderia mallei NCTC 10229] gi|126219332|gb|ABN82838.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 668] gi|126229055|gb|ABN92595.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106a] gi|126243745|gb|ABO06838.1| cystine ABC transporter, periplasmic cystine-binding protein [Burkholderia mallei NCTC 10247] gi|134246294|gb|EBA46383.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 305] gi|147749463|gb|EDK56537.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei FMH] gi|147753638|gb|EDK60703.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei JHU] gi|148027720|gb|EDK85741.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei 2002721280] gi|157936343|gb|EDO92013.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|160698671|gb|EDP88641.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei ATCC 10399] gi|169654387|gb|EDS87080.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei S13] gi|217393475|gb|EEC33496.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 576] gi|225931640|gb|EEH27645.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pakistan 9] gi|237502856|gb|ACQ95174.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei MSHR346] gi|238520963|gb|EEP84418.1| cystine ABC transporter, periplasmic cystine-binding protein [Burkholderia mallei GB8 horse 4] gi|242138501|gb|EES24903.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106b] gi|243060613|gb|EES42799.1| cystine ABC transporter, periplasmic cystine-binding protein [Burkholderia mallei PRL-20] Length = 264 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 85/252 (33%), Gaps = 19/252 (7%) Query: 1 MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K V+ L + F + + A +L ++K+RG L+ G+ F G+ Sbjct: 1 MKIASLKKLLVTGL-IGASFAAATAHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGEL 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD +A+++ + P ++ LQ+ + D++ T R+ L Sbjct: 60 VGFDVDIAKAIAAKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVGITDPRK--QTL 114 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F P F I K S+ L G + V GT Sbjct: 115 DFSPAYTFSSAQLIQRKDDARQFKSLEDLKGKKLGVALGTNYMD-----MAKSVPGIDVK 169 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E A R DA D L L P ++ S +P +G+ Sbjct: 170 TYPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNAQLP--LRPGANVGSANPSGIPFKKGN 227 Query: 235 TEWYNIVSWTHY 246 ++ ++ Sbjct: 228 PKFAKAIADAMT 239 >gi|283783251|ref|YP_003374005.1| extracellular solute-binding protein [Gardnerella vaginalis 409-05] gi|283441644|gb|ADB14110.1| bacterial extracellular solute-binding protein, family 3 [Gardnerella vaginalis 409-05] Length = 277 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 94/253 (37%), Gaps = 14/253 (5%) Query: 1 MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M F +IL ++ A + ++ GI G +G + Sbjct: 1 MKILQNRIFRAILAMLCTICCVMPLTAC--DRSDGKKVIRIGIKFDQPGMGFK-KSGTYV 57 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD + ++ + +I + +K+R LQ+ +D++ T R+ ++ Sbjct: 58 GFDVDVAKYVAKKLGYSEDQIVWKESPSKQRETMLQNGDVDMIVATYSITDARKKM--VS 115 Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + GQ ++ K + +S + L G +C +G+T+ + + + + + K + Sbjct: 116 FAGPYFIAGQDLLIRKDEHKVSGPNDLDGKRLCSVSGSTSAIAIKERYSS---KVQLMQQ 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E A + DA T D L L + ++ + I +G+T Sbjct: 173 PGYAECATALFSGIVDAVTTDDIILAGLATASR--GRLKLVNKPFTAEYYGIGIKKGNTG 230 Query: 237 WYNIVSWTHYAMV 249 ++ M+ Sbjct: 231 LAKKINAALKDMI 243 >gi|237667290|ref|ZP_04527274.1| extracellular solute-binding protein, family 3 [Clostridium butyricum E4 str. BoNT E BL5262] gi|237655638|gb|EEP53194.1| extracellular solute-binding protein, family 3 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 272 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 82/254 (32%), Gaps = 15/254 (5%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M + + I+ S + G + L G++ V + Sbjct: 1 MKVNKLIKGLAVVGIVVAMGVSVIGCGSSSKTSSGSTLDKDELIIGLDDTFVPMGFKDES 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ GFD+D +A+ + +++ ++ + L ID++ R+ Sbjct: 61 GELVGFDIDLAKAVGEKLNKK---VKFQAIDWSMKETELNGGNIDLIWNGYSINDERKE- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD--YFKAHNMKY 171 + F + Q + I+S + L+G + Q +T + + Sbjct: 117 -KVEFSKPYLNNTQIIVTLADSTINSKADLAGKKVGAQNQSTAVDAVEADGDIMSTFDGG 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + FE + A R DA D L + ++ IL + I Sbjct: 176 NLVTFEDNNQALMDLEAKRLDAIVVDE-ILARYYIKARGEEKYKILTENFGDEQYGVGIR 234 Query: 232 QGDTEWYNIVSWTH 245 +GDT++ + Sbjct: 235 KGDTKFVEAFNKAL 248 >gi|307132300|ref|YP_003884316.1| putative amino acid ABC transporter periplasmic protein [Dickeya dadantii 3937] gi|306529829|gb|ADM99759.1| Putative amino acid ABC transporter, periplasmic protein [Dickeya dadantii 3937] Length = 263 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 91/247 (36%), Gaps = 13/247 (5%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K F +++ +L + A L DI+KRG L+ + F V + +G Sbjct: 1 MKIGKRFL-AVVGAALLMVQAGQVMADQLQDIQKRGVLRVAVPQDFPPFGSVGTDLQPQG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +D+D R L+S + K+Q +P+ + R LQ+ ++D++ + RE + F Sbjct: 60 YDIDMARYLASEM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKV--IDF 114 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G K + + L G ++ V G ++ L + +E Sbjct: 115 SRAYAPFFLGVFGPKDTDVGAPEALQGKTVGVTRGAVEDMVLTETAPK---TADIKRYED 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +AY + + + A+ P++ + ++ SP + + + Sbjct: 172 NNTTLSAYLSGQVQYIATGNLVIAAIA--EKNPAKAPVAKFMLKDSPCYIGLKKDEPALK 229 Query: 239 NIVSWTH 245 + Sbjct: 230 AKIDELI 236 >gi|145593977|ref|YP_001158274.1| extracellular solute-binding protein [Salinispora tropica CNB-440] gi|145303314|gb|ABP53896.1| extracellular solute-binding protein, family 3 [Salinispora tropica CNB-440] Length = 294 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 86/227 (37%), Gaps = 9/227 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 S + + + +K G GF +G+ +GFDV+ + ++ + KI+++ Sbjct: 41 AAGSTMERLNEAQAIKIGTKFDQPGFGLKGLSGEPEGFDVEIAKIIAKELGIPEDKIEWV 100 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 +K R + +D++ R+ ++F Y GQ ++ K + Sbjct: 101 ETPSKVREDKIADGSVDMIVATYTIKDERKE--RVSFAGPYYEAGQNIMVKKDDTSITGP 158 Query: 142 QLSGA---SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + IC G+T + Y K ++ + F+ ++ A ++ + DA T D Sbjct: 159 ESFQDGSKKICSVTGSTPIEEIKKYLK--DIPSQLVPFDTYDKCRDALQSGQVDAVTTDN 216 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L D + + +K P + + D E+ + ++ Sbjct: 217 VILLGYIA--DDEDAFKLAGENFTKEPYGIGVKKDDAEFRDFINDIL 261 >gi|90579334|ref|ZP_01235144.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio angustum S14] gi|90440167|gb|EAS65348.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio angustum S14] Length = 258 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 88/261 (33%), Gaps = 23/261 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +I + + A K+ ++ GI F+ + NG+ KGFD Sbjct: 1 MKKWIL---AATLISAMGASAVQA------KEWKEVRFGIEGAYPPFSWTEPNGELKGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + K + + + +L +++ D + T R+ + F Sbjct: 52 VDMANALCTQM---QVKCKIVAQDWDGIIPSLLARKYDAIIAAMSITEERKK--KIDFTG 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F+ K + + L G I VQ TT + L D F + + Sbjct: 107 KYALIPNKFVAKKGTELDFTKEGLKGVKIGVQRATTHDKYLTDNF---GESVEIVRYGSF 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E +A R + GD SAL L D + ++ A+ + D Sbjct: 164 DEAYLDLKAGRIASVLGDASALEEGLLNKDGGEGFEFIGPSLTDPKWFGEGFGIAVRKQD 223 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + + A+ + Sbjct: 224 KDLTKKLDEAILALRENGQYK 244 >gi|163855575|ref|YP_001629873.1| ABC transporter, substrate binding protein [Bordetella petrii DSM 12804] gi|163259303|emb|CAP41603.1| ABC transporter, substrate binding protein [Bordetella petrii] Length = 279 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 48/228 (21%), Positives = 89/228 (39%), Gaps = 6/228 (2%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 T+ + ++S L + L+CGI + +G+DV +C+ ++ A+ Sbjct: 22 TGTAQAQSSSTLDRVINSKTLRCGIQLDYPPAGFRTPQNEPEGYDVAYCKDMAKALGATA 81 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 ++ + ER +L S +ID+L +T T R +L +AF + HK Sbjct: 82 QIVE---TPSAERIPSLVSNRIDVLIASTSITPQR--ALSVAFSQPYVSFINVAMTHKDT 136 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYF-KAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 G+ L G +I G+TTE L F K ++ K I + E A + D Sbjct: 137 GVQKFDDLKGRTIGGVTGSTTEQELRAIFNKWNDPKGKFISYGSESEAFLALNQRKIDGL 196 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 AL + P+ + + A+ + D ++ ++ Sbjct: 197 IVSAGTAGALVKSGQFPALQIKGEAPSPADLVGIAVRKSDADFLRWIN 244 >gi|309808664|ref|ZP_07702556.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LactinV 01V1-a] gi|308168138|gb|EFO70264.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LactinV 01V1-a] Length = 273 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 83/234 (35%), Gaps = 10/234 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74 + ++ +K+ + G F + + GF++D +A++ + Sbjct: 21 GGCGHAKKVNVYQKVKQSRTMIWGTRADTRLFGYMDIKSSKIIGFEIDMAKAVTKQMLGK 80 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + +++ K R L+++ I+ + T R+ + F G ++ Sbjct: 81 DAVAKFVQTTPKTRIPLLKNRNINAIWATMTITPERKK--QVDFARPYIGAGASLLVPNN 138 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I V QL+ + GTT + + ++ + +A +A + A Sbjct: 139 SKIKDVHQLNNKKVLAVKGTTAVADIKKVAPKAK----VLEYDDYGQAFSALKAGQGVAL 194 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 T D L + + P H ++ + P A+ +G E + ++ A+ Sbjct: 195 TTDNCLLAGIAS--ENPGFH-LIGKNYTNQPYGIAVDKGQAELRDHINKALLAL 245 >gi|271500708|ref|YP_003333733.1| family 3 extracellular solute-binding protein [Dickeya dadantii Ech586] gi|270344263|gb|ACZ77028.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech586] Length = 278 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 94/251 (37%), Gaps = 19/251 (7%) Query: 4 DFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 F S L L+ L + + S L + +RG L+ G F G+ Sbjct: 11 RLFASALVLLTLAGCTPTDEKKADNAAPQSALQTVLQRGTLRVGDCLSFAPFGFYDQAGN 70 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+DVD +AL+ A+ ++ + + R LQ+ ++D++ N L R Sbjct: 71 PDGYDVDLAKALAKAMGVK---LEMVNTTSANRIPNLQTNKVDVVFCNFTRNLERAK--E 125 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 ++F + ++ K GI S ++G +I G+T D + + Sbjct: 126 ISFTAPYVVASEAMLVRKNSGIQSAHDMAGKTIATVKGSTN----GDEVRNLGIDVKIQE 181 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + A + + DA D + L + + V ++ A + QGD Sbjct: 182 YDSSQAAILAVKQGQADAMIEDNNFLA--YQSKLDSTLTVTNEALVPLEYNAFGVKQGDQ 239 Query: 236 EWYNIVSWTHY 246 W N ++ + Sbjct: 240 VWLNYLNEFLF 250 >gi|89899053|ref|YP_521524.1| extracellular solute-binding protein [Rhodoferax ferrireducens T118] gi|89343790|gb|ABD67993.1| extracellular solute-binding protein, family 3 [Rhodoferax ferrireducens T118] Length = 266 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 92/244 (37%), Gaps = 11/244 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +L + + +AS L DI+KRG L+ + T F+ + NG+ G Sbjct: 3 MSNFLPAILLACAGFAGVAATAHASTLDDIQKRGELRIAVQTQGPPFSMIDKNGERTGSS 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ + ++ + +L L+ AL S + D+L+ + TL R +AF Sbjct: 63 VELAKLMAKEMGVKA---VFLDLDWDGLLPALISGKADLLAADMTPTLARAT--KVAFTK 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G +S + G I V G+T E F+ +K Sbjct: 118 PFIYIGPVVAAKAGSKFTSTAACKAPGTKIAVLFGSTGEKLAKTVFEKGEIKS---YKGG 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A + + D D SA+ + ++P++++K PLA A + Sbjct: 175 GTLLLDAVKNGQADCLLNDSSAVAGQAAGYPAGT-FKVMPELLAKEPLAYATRYDSLDLL 233 Query: 239 NIVS 242 ++ Sbjct: 234 TWIN 237 >gi|260881511|ref|ZP_05404585.2| amino acid ABC transporter, amino acid-binding protein [Mitsuokella multacida DSM 20544] gi|260848627|gb|EEX68634.1| amino acid ABC transporter, amino acid-binding protein [Mitsuokella multacida DSM 20544] Length = 270 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 79/254 (31%), Gaps = 12/254 (4%) Query: 1 MY-KDFFV----SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K +++ + A +G + G++ N + Sbjct: 3 MKWKKILALGMAAVMTAAFVTGCGGQKAADNGSGSGDKGKIIVGLDDNFPPMGFKDENNE 62 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD + S + + +++ ++ + L+S ++++L D T R+ Sbjct: 63 ITGFDVDLAKEASKRLGRE---VEFKAIDWSSKEAELKSGRVNVLWNGLDITEKRKE--N 117 Query: 116 LAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F + Q + K + I+ L+G + Q+ +T E + Sbjct: 118 MLFSDPYMDNRQIIFVKKGRTDITDEKSLAGKIVGTQSASTAEEYMDKTDFFKKDVKEVK 177 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + R DA GD + + V + + S A + + Sbjct: 178 KYSDFVTAFMDLENGRVDAIVGDEIVGRYYMSKHPEAIDAVDVA-VGPVSQFGIAFAKDN 236 Query: 235 TEWYNIVSWTHYAM 248 + V M Sbjct: 237 KALRDDVQKVLDEM 250 >gi|146282694|ref|YP_001172847.1| cystine transporter subunit [Pseudomonas stutzeri A1501] gi|145570899|gb|ABP80005.1| cystine ABC transporter, periplasmic cystine binding protein [Pseudomonas stutzeri A1501] Length = 264 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 81/227 (35%), Gaps = 13/227 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A +L +IK G L+ G+ F +G+ GF+VDF AL+ + + Sbjct: 26 AFAADLLDEIKSNGTLEVGLEGTYPPFNYQDESGELTGFEVDFANALAEELGVKAE---F 82 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGIS 138 P AL+SK++D++ + R+ F G + K I Sbjct: 83 QPTKWDGILAALESKRLDVVINQVTISEERK--QKYDFSTPYTVSGIQALTRKADADSIK 140 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G + V GT E L K + + ++ R D D Sbjct: 141 LPTDLAGKKVGVGLGTNYEQWL----KENVPQADIRTYDDDPTKFQDLAVGRIDVILVDR 196 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L A ++ + + + S+ A+ +G+ + ++ Sbjct: 197 --LAAFEMVEKTGNRLAVAGEAFSRQESGVALRKGNPQLLAAINEAI 241 >gi|139439419|ref|ZP_01772860.1| Hypothetical protein COLAER_01880 [Collinsella aerofaciens ATCC 25986] gi|133775198|gb|EBA39018.1| Hypothetical protein COLAER_01880 [Collinsella aerofaciens ATCC 25986] Length = 291 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 93/255 (36%), Gaps = 29/255 (11%) Query: 2 YKDFF----VSILCLIILFFTSFSTN--------ASILGDIKKRGFLKCGINTGLVGFAE 49 + F +L L T + S L IK RG L G+ + G+ Sbjct: 13 RRRFLQLAGAGMLALTGTALTGCGNSTSGEGSDKGSKLAAIKSRGHLNAGVKKDVPGYGY 72 Query: 50 VK-ANGDWKGFDVDFCRALSSAIFD-------DPSKIQYLPLNAKERFLALQSKQIDILS 101 A G ++G +VD C +++A+F +++ + K R + + Q+D+++ Sbjct: 73 YDTAKGRFEGMEVDLCYQIAAAVFGVSYKEARAQELVEFTDVTPKTRGPLIDNGQLDVVA 132 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 T R+ F D G ++ K+ G +S+ L G I V G TT+ + Sbjct: 133 ATYTITDERKK--SWDFSTPYRTDYVGLMVKKRSGFTSIEDLDGKVIGVSQGATTQSLIE 190 Query: 162 DYFKAHNMKYHP--IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 K + P F I ++ A D + D S L + ++ P+ Sbjct: 191 QMIKDNGFSCKPEFRAFSGYPIIKSSLDAGNIDVFAMDRSTLAGYM----NETVELLQPE 246 Query: 220 IISKSP-LAPAIIQG 233 + A +G Sbjct: 247 VKFGEQGYGVATKKG 261 >gi|295689321|ref|YP_003593014.1| extracellular solute-binding protein family 3 [Caulobacter segnis ATCC 21756] gi|295431224|gb|ADG10396.1| extracellular solute-binding protein family 3 [Caulobacter segnis ATCC 21756] Length = 261 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 90/261 (34%), Gaps = 16/261 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + +S L L +L ++ + IK G L+ G+ F A+G GF+ Sbjct: 6 RRAVISGLGLALLAACGKKPDSDVSGWDRIKASGTLRIGLEGTYPPFNFQGADGQLTGFE 65 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF +AL++ + P + P AL+S ++D++ T + F Sbjct: 66 VDFAKALAAQLGLKPE---FRPAPFAGLLGALESGRVDVVINQITITP--DRKDKYDFSE 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G I K K S L+G + V GT E L +A+ ++ Sbjct: 121 PYTISGIQIITLKAKPGPSNPDELAGKKVGVGLGTNYEQWL----RANVPTADVRTYDDD 176 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +A R DA D T+ E V + A+ + D Sbjct: 177 PTKYQDLKAGRIDAVLNDRLVAADFVKTSP---EFVASGPPFAAQGAGVAMKK-DAALKV 232 Query: 240 IVSWTHYAMVTAEELGITQKN 260 I+ A+ + +L + Sbjct: 233 IIDQAIDALRASGKLSAMSQQ 253 >gi|239834032|ref|ZP_04682360.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] gi|239822095|gb|EEQ93664.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] Length = 280 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 87/254 (34%), Gaps = 12/254 (4%) Query: 3 KDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + ++ + L + + A + IK G +K G+ F + + + G+D Sbjct: 19 RRLAMAFIGAGALATVLAPAAFAQTVDGIKSAGKIKIGMLVDFPPFGIMNTSNEPDGYDA 78 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L+ I + + + R LQS Q+D+L + T R + F Sbjct: 79 DVAKLLAKEIGVEAQIVP---VTGPNRIPYLQSGQVDVLVASLGITEERAK--SVDFSQP 133 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G K ++ LSG +I V +T + + + F+ Sbjct: 134 YAGISIGVFGPKDIAVAKPEDLSGKTIGVARASTQDTAVTKVAPQ---DANIRRFDDDAS 190 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + + + +S + A ++ P + +S+ A+ +G E V Sbjct: 191 AVQALLSGQVELI--GLSNVVAAEIEKAAPGRYEQ-KIQLSQQVQGIAVRKGSAEMLEFV 247 Query: 242 SWTHYAMVTAEELG 255 + + EL Sbjct: 248 NKFIEKAKSDGELN 261 >gi|332107601|gb|EGJ08825.1| polar amino acid transporter substrate-binding protein [Rubrivivax benzoatilyticus JA2] Length = 270 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 64/254 (25%), Positives = 96/254 (37%), Gaps = 14/254 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L DI+K G L+ F V A G DVD+ A + + +Q +P Sbjct: 24 DRLADIQKAGVLRVAAFDANPPFGYVDAKTKKIVGLDVDYAEAFAKKLGVK---LQIVPT 80 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 N R L S ++D++ N T R +G F + G FI K + S QL Sbjct: 81 NPANRVPLLASNKVDLVFANFTITEERAKVVG--FSIPYFASGTQFIARKG-TLKSPEQL 137 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 SG I V GTT E+ L + + + ++ A R A + D L Sbjct: 138 SGLRIGVDKGTTNEIQLREKYPQA----TLVAYDDTPFAFTALRNGNVQAISQDGPKLIG 193 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 L ++ I P IS+ + I +G+T V+ T + E G QK + Sbjct: 194 LLANVPDRDKYEIPPFAISQDYIGVGIPKGETALTEFVNKTL---LELEADGRAQKIYDT 250 Query: 264 VSKDTTNPDVQRFL 277 TT ++R Sbjct: 251 WFGPTTKTPLKRIF 264 >gi|158425494|ref|YP_001526786.1| putative amino acid ABC transporter periplasmic solute-binding protein [Azorhizobium caulinodans ORS 571] gi|158332383|dbj|BAF89868.1| putative amino acid ABC transporter periplasmic solute-binding protein [Azorhizobium caulinodans ORS 571] Length = 312 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 86/256 (33%), Gaps = 15/256 (5%) Query: 4 DFFVSILCLIILFFTSFSTNASIL-----GDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 +L + + + A+ I +G L+ G+ + +G + G Sbjct: 38 KAVRVLLATGFVSWAVPAAQAATPMPSPPELITSQGVLRAGVRCDQPPYGFQDGSGAFAG 97 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + D R ++ IF K+++ + A+ R L K++D+L T R+ + F Sbjct: 98 VETDMARQIADWIFGSKDKVEFTCVTAENRIPQLTGKRVDLLIATLGVTPERQRV--IDF 155 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G ++ V+ L ++ + GT D + Sbjct: 156 SIPYRWGASGLLVRADSPFQKVADLDHHTVVMPKGTVQAKWFEDMMP----GVKTLRLNT 211 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A + R D Y D + L + +L D S ++ + + + W Sbjct: 212 AADSLQALKQGRADGYAHDAATLVVAAAQDK---SLRLLNDPYQTSEVSIGLRKDEPTWK 268 Query: 239 NIVSWTHYAMVTAEEL 254 + + AE+L Sbjct: 269 TYLDAAV-ERMHAEKL 283 >gi|330810053|ref|YP_004354515.1| ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378161|gb|AEA69511.1| ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 272 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 81/246 (32%), Gaps = 6/246 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M L +++ +A L DI G L+C + + GFD Sbjct: 1 MKNPALAVALSVVLTPLFIAPAHADKLDDIIGSGKLRCAVTLDFPPMGFRDESNKPAGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C L+ + D ++ +R AL S + D++ +T TL R ++GL Sbjct: 61 VDYCNDLAKVLGVDAEVVE---TPFSDRIPALLSGRADVIVASTSDTLERAKTVGL--TV 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + GI+S + L G ++ + T + L K+ ++ Sbjct: 116 PYFAFQMVVLTRDNTGITSYADLKGKALGNTSSTYEAIALEKDQKSWGSG-SFRAYQSQN 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A DA + A + + ++ + + N Sbjct: 175 DTLLAVAQGHIDATVVTNTVAAATIKSGKYKGLKIAGDAPYVIDYVSLGAKRSEYGLLNY 234 Query: 241 VSWTHY 246 ++ Sbjct: 235 LNLFVN 240 >gi|295676371|ref|YP_003604895.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295436214|gb|ADG15384.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 264 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 83/237 (35%), Gaps = 15/237 (6%) Query: 13 IILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 I ++ + +A +L +K+RG L+ G+ F +G+ G+DVD +A+++ + Sbjct: 15 IGASLSAVAAHAEDLLDQVKQRGTLRVGLEGTFPPFNSKAPSGELVGYDVDIAKAVAAKL 74 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 P ++ LQ+ + D++ T R+ L F P + I Sbjct: 75 GVKP---VFVTTEWSGIIAGLQAGKFDVIVNQVGITDARK--QTLDFSPAYTYSAAQLIQ 129 Query: 132 HKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 K +S+ L G + V GT + E A Sbjct: 130 RKDDTRQFTSLEDLKGKKLGVGLGTNYMD-----MAKSVPGIDVKTYPGAPEYLRDLAAG 184 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 R DA D L L ++ P ++ + +P +G+ ++ + Sbjct: 185 RLDAALNDRLMLAYLLKNSNLP--LRTGANVGTGNPSGIPFKKGNPKFAQAIDEAMT 239 >gi|229086726|ref|ZP_04218893.1| Arginine-binding extracellular protein artP [Bacillus cereus Rock3-44] gi|228696600|gb|EEL49418.1| Arginine-binding extracellular protein artP [Bacillus cereus Rock3-44] Length = 261 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 89/256 (34%), Gaps = 12/256 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG--DIKKRGFLKCGINTGLVGFAEVKAN--GDW 56 M K +S ++I+ S + K + L G + + V+A+ + Sbjct: 1 MKKLLSISFALILIVSMFSACSKGETKESNTKKDKKVLVMGTSADYKPYEYVEASKSDEI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD + + + + I+ ++ +L S ++D + T R+ Sbjct: 61 IGFDVDIAKYIGKELGYE---IKIKDMDFGGLLASLNSGKVDFVMAGMTPTPERKK--NA 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F I + + K GI S+ L + VQ G+ E D+ +K+ Sbjct: 116 DFTDIYFVAKNMIVSKKDSGIQSLQDLKDKKVGVQTGSIQEEKAEDF--QKQVKFEAQGR 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 +R+ EI +A R DA + + + + +P+ + A A+ + + Sbjct: 174 DRIPEIVQEIQAGRFDAAILEDTVAKNYLEKMK-GLQGIEIPEAPEEVGSAIALPKNSDK 232 Query: 237 WYNIVSWTHYAMVTAE 252 E Sbjct: 233 TEEFNKVIKKMQENGE 248 >gi|323698676|ref|ZP_08110588.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. ND132] gi|323458608|gb|EGB14473.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans ND132] Length = 265 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 84/246 (34%), Gaps = 12/246 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K +L L++ + + + L IK G LK + F V + G+D+D Sbjct: 10 KMVLACMLALVLACGPALA--SDTLSQIKDAGVLKVAVPQDFPPFGSVGPDMQPLGYDID 67 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +++ + ++ +P+ + R L + ++D++ + R + F Sbjct: 68 MASLIAAKLGVK---VKLVPVTSTNRIPYLTTGKVDLVISSLGKNPKRAAV--IDFSDAY 122 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G + ++ + L+ ++ V G+ +L L FE Sbjct: 123 APFFNGVFGTSDEKVAGPADLADKTVAVTRGSIEDLELTKVAPE---STVIKRFEDNSST 179 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 AAY+ + D ++ +P++ + +I SP I + V+ Sbjct: 180 IAAYQTGQVDLVATGNVVAASI--NEKKPAKMLETKFMIKNSPCYVGIAKDQPALMAKVN 237 Query: 243 WTHYAM 248 Sbjct: 238 AIIAGA 243 >gi|212716832|ref|ZP_03324960.1| hypothetical protein BIFCAT_01775 [Bifidobacterium catenulatum DSM 16992] gi|212660117|gb|EEB20692.1| hypothetical protein BIFCAT_01775 [Bifidobacterium catenulatum DSM 16992] Length = 301 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 89/220 (40%), Gaps = 11/220 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L +IKK G LK + + F + G G+DV F L + ++Y + Sbjct: 54 ARTLDEIKKSGELKVAVFSDKAPFGYIDKEGKNAGYDVYFAERLGKDLGVK---VKYTSV 110 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R L S ++DI N T R+ + F G + + I+ VSQL Sbjct: 111 DPAARVDVLTSNKVDITLANFTVTDERKE--KVDFAKPYMKVALGVVSPENAEITDVSQL 168 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G ++ + GTT E F+ + +++ + A R DA++ D + + A Sbjct: 169 KGKTLIIAKGTTAESY----FEKNEPDVKLQKYDQYADAYNALLDGRGDAFSTDNTEVLA 224 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 V + + + +APA+ +G+ E N ++ Sbjct: 225 WA--KSNKGFKVGITKLGDEDTIAPAVQKGNKELLNWLND 262 >gi|220932713|ref|YP_002509621.1| extracellular solute-binding protein family 3 [Halothermothrix orenii H 168] gi|219994023|gb|ACL70626.1| extracellular solute-binding protein family 3 [Halothermothrix orenii H 168] Length = 244 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 85/244 (34%), Gaps = 21/244 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L+++ + G + F V +G++ GFD Sbjct: 1 MKKLSIILVTLLLVMLAGIGVSAE----------KYVVGTSADFPPFEYV-EDGEFVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D RA++ + +++ ++ AL+S IDI T RE + F Sbjct: 50 MDLIRAIAE---VEGFEVEIRDMSFDSLIAALKSGNIDIAIAGMTITEKREKV--VDFSI 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179 Y Q I+ + ++ ++ VQ TT +L + D + + + ++ Sbjct: 105 PYYTANQSVIVKEDSDLNLTVLYGDNNVGVQTSTTGDLWVTDNLEKKGILTGKVVRYDTF 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 DA D A + + P + II+ + +G+ + N Sbjct: 165 VLAVTDLVNGNLDAIVLDSP--VAERFVDSHP--LKEVGIIITGEEYGIVVNEGNKDLLN 220 Query: 240 IVSW 243 ++ Sbjct: 221 KINN 224 >gi|291484836|dbj|BAI85911.1| hypothetical protein BSNT_03569 [Bacillus subtilis subsp. natto BEST195] Length = 255 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 97/255 (38%), Gaps = 11/255 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + I ++ ++ S KK L G + F + + + GFD Sbjct: 1 MKKWLLLLVAACITFALSACGSSNSGSEGGKK--KLIMGTSADYKPFEYKEGD-NIVGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ +AL+ + I+ ++ AL+SKQ+D++ T R+ + F Sbjct: 58 VELAKALAKKAGYE---IEVQDMDFNSLITALKSKQVDLVLSGMTPTPERKK--QVDFSD 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y + K GI S+ L G ++ VQ G+ E + + K R+ Sbjct: 113 VYYTANHMIVSKKDSGIQSLKDLKGKTVGVQLGSIQEEKGKELSPEYGFKTEDR--NRIS 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ ++ R DA + ++ + ++PD ++ + + D+E + Sbjct: 171 DLVQEIKSDRFDAAIIEDIVAEGY-FKSNDDLQGFVIPDAKAEEAGSAIAFRKDSELTDK 229 Query: 241 VSWTHYAMVTAEELG 255 + M EL Sbjct: 230 FNKALKEMEDNGELE 244 >gi|325496960|gb|EGC94819.1| cystine transporter subunit [Escherichia fergusonii ECD227] Length = 288 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 84/241 (34%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V L L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 36 VMALALVAGMSAKTFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 95 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 96 LAKHLGVEA---TLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTVSG 150 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + + L G + V GT E ++ + + ++ Sbjct: 151 IQALVKKGNEGTIKTANDLKGKKVGVGLGTNYE----EWLRQNVQGVDIRTYDDDPTKYQ 206 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + D S+ A+ + + + V+ Sbjct: 207 DLRVGRIDAILVDR--LAALDLVKKTKDTLAVTGDAFSRQESGVAVRKNNEDLLKAVNEA 264 Query: 245 H 245 Sbjct: 265 I 265 >gi|237654574|ref|YP_002890888.1| extracellular solute-binding protein family 3 [Thauera sp. MZ1T] gi|237625821|gb|ACR02511.1| extracellular solute-binding protein family 3 [Thauera sp. MZ1T] Length = 265 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 74/214 (34%), Gaps = 8/214 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G++ + GFD+D + + + +++ P++ + L Sbjct: 40 KIVIGLDDNFPPMGFRNEKNELVGFDIDLAKEAAKRLG---IAVEFKPIDWSAKEAELNG 96 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K++D L T R ++G F + Q ++ I + ++L+G I +Q G+ Sbjct: 97 KRVDALWNGLTITEERRKNIG--FTSAYMENHQIIVVPAASAIKTKAELAGKVIGIQDGS 154 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + + A + K F R DA D + T +P+++ Sbjct: 155 SAVDAVQKDPVAASFK-ELKKFGDNVTALMDLTTGRLDAVVLDE--VVGRYYTAKKPNDY 211 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 V+L D + DT + M Sbjct: 212 VVLDDHFGTEEYGVGTRKDDTALLAKLQKAMDEM 245 >gi|90577483|ref|ZP_01233294.1| putative amino acid ABC transporter [Vibrio angustum S14] gi|90440569|gb|EAS65749.1| putative amino acid ABC transporter [Vibrio angustum S14] Length = 270 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 82/245 (33%), Gaps = 9/245 (3%) Query: 1 MYKDFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F V I L +L + + S L IK+RG L+ G++T V +A G+ G Sbjct: 1 MKRFFAVLITALTLLLSASHALAAEKSTLEQIKERGTLRVGLST-FVPWAMRDKQGELIG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ ++++P AL + + D++ T R +L + F Sbjct: 60 FEVDVAKRLAKDAGVK---VEFIPTAWDGIIPALLAGKFDVIIGGMSITPQR--NLSVLF 114 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G K+ +S V A K + K F+ Sbjct: 115 TTPYSHSGVQLAASKELAGDKLSIADYNKRSVTLAVRRGAVTAQTAKKYFPKAKLRQFDD 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A + L + + +S+ AI QGD Sbjct: 175 ESQAFQEVLNGNAQAVLASTPKPEQMTLQYKDKL-FLPFKERLSQGSEGFAIRQGDFNLL 233 Query: 239 NIVSW 243 N + Sbjct: 234 NFFNN 238 >gi|302191508|ref|ZP_07267762.1| amino acid ABC transporter solute-binding component [Lactobacillus iners AB-1] gi|309804283|ref|ZP_07698360.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LactinV 11V1-d] gi|309806868|ref|ZP_07700855.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LactinV 03V1-b] gi|309809497|ref|ZP_07703355.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners SPIN 2503V10-D] gi|312872448|ref|ZP_07732517.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LEAF 2062A-h1] gi|308163686|gb|EFO65956.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LactinV 11V1-d] gi|308166734|gb|EFO68926.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LactinV 03V1-b] gi|308170169|gb|EFO72204.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners SPIN 2503V10-D] gi|311092030|gb|EFQ50405.1| ABC transporter glutamine-binding protein GlnH [Lactobacillus iners LEAF 2062A-h1] Length = 273 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 83/234 (35%), Gaps = 10/234 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74 + ++ +K+ + G F + + GF++D +A++ + Sbjct: 21 GGCGQAKKVNVYQKVKQSRTMIWGTRADTRLFGYMDIKSSKIIGFEIDMAKAVTKQMLGK 80 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + +++ K R L+++ I+ + T R+ + F G ++ Sbjct: 81 DAVAKFVQTTPKTRIPLLKNRNINAIWATMTITPERKK--QVDFARPYIGAGASLLVPNN 138 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I V QL+ + GTT + + ++ + +A +A + A Sbjct: 139 SKIKDVHQLNNKKVLAVKGTTAVADIKKVAPKAK----VLEYDDYGQAFSALKAGQGVAL 194 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 T D L + + P H ++ + P A+ +G E + ++ A+ Sbjct: 195 TTDNCLLAGIAS--ENPGFH-LIGKNYTNQPYGIAVDKGQAELRDHINKALLAL 245 >gi|259501519|ref|ZP_05744421.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus iners DSM 13335] gi|315653362|ref|ZP_07906284.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus iners ATCC 55195] gi|259167037|gb|EEW51532.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus iners DSM 13335] gi|315489287|gb|EFU78927.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus iners ATCC 55195] Length = 277 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 83/234 (35%), Gaps = 10/234 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74 + ++ +K+ + G F + + GF++D +A++ + Sbjct: 25 GGCGQAKKVNVYQKVKQSRTMIWGTRADTRLFGYMDIKSSKIIGFEIDMAKAVTKQMLGK 84 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + +++ K R L+++ I+ + T R+ + F G ++ Sbjct: 85 DAVAKFVQTTPKTRIPLLKNRNINAIWATMTITPERKK--QVDFARPYIGAGASLLVPNN 142 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I V QL+ + GTT + + ++ + +A +A + A Sbjct: 143 SKIKDVHQLNNKKVLAVKGTTAVADIKKVAPKAK----VLEYDDYGQAFSALKAGQGVAL 198 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 T D L + + P H ++ + P A+ +G E + ++ A+ Sbjct: 199 TTDNCLLAGIAS--ENPGFH-LIGKNYTNQPYGIAVDKGQAELRDHINKALLAL 249 >gi|116627712|ref|YP_820331.1| amino acid ABC transporter periplasmic protein [Streptococcus thermophilus LMD-9] gi|116100989|gb|ABJ66135.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus thermophilus LMD-9] gi|312278254|gb|ADQ62911.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus thermophilus ND03] Length = 283 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 83/256 (32%), Gaps = 18/256 (7%) Query: 1 MYKD----FFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEV 50 M K ++ L + ++ +T K +K G + V Sbjct: 1 MKKIVKTVLLACLVILPLFALSACSSRSHFATQKDQWQTYTKEKKIKIGFDATFVPMGYE 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + +G + GFD+D A+ D +++ ++ + L++ ID++ T R Sbjct: 61 EKDGSYIGFDIDLANAVFKLYGID---VEWQAIDWDMKETELKNGTIDLIWNGYSVTDER 117 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM- 169 + F + Q + K GI SV+ ++G ++ QAG++ K Sbjct: 118 K--QSADFTEPYMVNEQVLVTKKSSGIDSVAGMAGKTLGAQAGSSGYDAFNASPKILKDV 175 Query: 170 --KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + + + R D D + ++ ++P A Sbjct: 176 VANQKVVQYSTFTQALIDLNSGRIDGLLIDRVYANYYLEKSGVLDQYNVMPAGYEGESFA 235 Query: 228 PAIIQGDTEWYNIVSW 243 + D ++ Sbjct: 236 VGARKVDKTLIKKINQ 251 >gi|322378094|ref|ZP_08052580.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Streptococcus sp. M334] gi|321280931|gb|EFX57945.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Streptococcus sp. M334] Length = 302 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 15/261 (5%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 38 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 97 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R Sbjct: 98 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 152 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 153 DFSTPYYTSKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 208 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 209 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 268 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 E V T + + EL Sbjct: 269 KELKEAVDKTIQKLKESGELD 289 >gi|330951203|gb|EGH51463.1| extracellular solute-binding protein [Pseudomonas syringae Cit 7] Length = 261 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 89/260 (34%), Gaps = 11/260 (4%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + +A+ L D+ RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + F Sbjct: 61 DIDTAQLLADKL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + ++ L G +I V G ++ L+ FE Sbjct: 116 RAYAPFYLAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSKVAPE---GAVIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A ++ P L + SP+ + +G E Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLG 230 Query: 240 IVSWTHYAMVTAEELGITQK 259 V A L + Sbjct: 231 RVDEILNAAKADGSLENASQ 250 >gi|297202815|ref|ZP_06920212.1| glutamate binding protein [Streptomyces sviceus ATCC 29083] gi|297148212|gb|EFH28894.1| glutamate binding protein [Streptomyces sviceus ATCC 29083] Length = 281 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 76/203 (37%), Gaps = 5/203 (2%) Query: 43 GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 G + +G + GFDVD ++ + P +I+++ + +R AL + I++ Sbjct: 49 DQPGLGLKEPDGSFSGFDVDVATYVAKQLGYKPDQIEFVETKSADRENALARGDVKIIAA 108 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 R+ + F Q ++ K IS + L+G +C G+T+ + D Sbjct: 109 TYSINDERKK--KVDFAGPYLLAHQDLLVKKDSKISQATDLNGEKLCSVTGSTSAQNVHD 166 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 F K + E A ++ DA T D S L + + + +S Sbjct: 167 DFA---PKAQLKQYGGYSECIAGLQSGAVDAVTTDDSILAGFAAQDKYKGQFKLAGLKLS 223 Query: 223 KSPLAPAIIQGDTEWYNIVSWTH 245 + +GDT N V+ Sbjct: 224 NENYGIGVKKGDTATLNKVNAAL 246 >gi|227894179|ref|ZP_04011984.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ultunensis DSM 16047] gi|227864009|gb|EEJ71430.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ultunensis DSM 16047] Length = 191 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 76/197 (38%), Gaps = 12/197 (6%) Query: 1 MYKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K + +++ LF T S I ++ + G++ V K NG Sbjct: 1 MKKKWIFALISFFALFLTGCESVQQRSNTQDTWNKIARKKQVVIGLDDSFVPMGFEKKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G+D+D +A+ ++ + ++ L++ ID+L T R+ Sbjct: 61 QLTGYDIDLAKAVFKQYG---IRVSFQTIDWSMNVTELRNGTIDLLWNGYSITPERKK-- 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 +AF + Q ++ K GI+S +Q+ + +Q G+T E K + K + Sbjct: 116 KVAFSRPYLRNRQVLVVKKNSGINSFNQMHKYELGMQTGSTAEQWYETKQKVLHAKKT-V 174 Query: 175 VFERVEEIDAAYRAHRC 191 +++ + A R Sbjct: 175 LYDTISNSFLDLNAGRI 191 >gi|170719627|ref|YP_001747315.1| extracellular solute-binding protein [Pseudomonas putida W619] gi|169757630|gb|ACA70946.1| extracellular solute-binding protein family 3 [Pseudomonas putida W619] Length = 266 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 87/250 (34%), Gaps = 14/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + S A + D KRG L+ G++ + F G+ GF+ Sbjct: 1 MMKKYLSRLLVGVTALVAVASAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ + AL + + D++ T R +L L F Sbjct: 61 VDILKAMAKSMGVKLETVS---TAYDGIIPALLTDKFDMIGSGMTLTQER--NLRLNFSE 115 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K I S L+ + + TT E+ + Sbjct: 116 PFIVVGQTLLIRKDLAGEIKSYKDLNNEKYRITSKLGTTGEMVAKKLIAKATYHG----Y 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +E + DA+ D + L + + PLA + +GD + Sbjct: 172 DNEQEAVMDVVNGKADAFVYDAPYNVVAVDKAGAGK-LLFLEEPFTYEPLAFGLKKGDYD 230 Query: 237 WYNIVSWTHY 246 N ++ + Sbjct: 231 SINFINNFLH 240 >gi|169834421|ref|YP_001693634.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae Hungary19A-6] gi|168996923|gb|ACA37535.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae Hungary19A-6] Length = 268 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 15/261 (5%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 4 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R Sbjct: 64 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 119 DFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVSKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 E V T + + EL Sbjct: 235 KELKEAVDKTIQKLKESGELD 255 >gi|168487060|ref|ZP_02711568.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae CDC1087-00] gi|183570002|gb|EDT90530.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae CDC1087-00] Length = 268 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 15/261 (5%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 4 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R Sbjct: 64 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 119 DFSTPYYTAKNKLIVKKSDLTTYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVSKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 E V T + + EL Sbjct: 235 KELKEAVDKTIQKLKESGELD 255 >gi|307710246|ref|ZP_07646689.1| putative amino acid transporter, amino acid-binding protein [Streptococcus mitis SK564] gi|307619008|gb|EFN98141.1| putative amino acid transporter, amino acid-binding protein [Streptococcus mitis SK564] Length = 268 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 15/261 (5%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 4 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R Sbjct: 64 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 119 DFSIPYYTSKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 E V T + + EL Sbjct: 235 KELKEAVDKTIQKLKESGELD 255 >gi|308235037|ref|ZP_07665774.1| extracellular solute-binding protein [Gardnerella vaginalis ATCC 14018] gi|311114714|ref|YP_003985935.1| glutamine ABC transporter binding protein [Gardnerella vaginalis ATCC 14019] gi|310946208|gb|ADP38912.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Gardnerella vaginalis ATCC 14019] Length = 290 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 92/249 (36%), Gaps = 15/249 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 Y+ I L + S + S ++ GI G +G + GFDV Sbjct: 22 YRAILSMICALCCVLPLSACSKNSRND------VIRIGIKFDQPGLGFK-KSGTYVGFDV 74 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + ++ + +I + +K+R LQ+ +D++ T R ++F Sbjct: 75 DVAKYVAKKLGYSEDRIVWKESPSKQREAMLQNGDVDMIVATYSITDAR--KNTVSFAGP 132 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + GQ ++ K + +S L G +C G+T+ + + + + + K + Sbjct: 133 YFIAGQDLLVRKDEHKVSGPDDLDGKRLCSVTGSTSAIVIKEKYSS---KVQLMQQPGYA 189 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A + DA T D L L + ++ ++ I +G+T+ Sbjct: 190 ECATALFSGIVDAVTTDDIILAGLATASR--GRLKLVSKPFTEEHYGIGIKKGNTKLAKR 247 Query: 241 VSWTHYAMV 249 ++ M+ Sbjct: 248 INNALKDMI 256 >gi|70728423|ref|YP_258172.1| basic amino acid ABC transporter periplasmic basic amino acid-binding protein [Pseudomonas fluorescens Pf-5] gi|68342722|gb|AAY90328.1| basic amino acid ABC transporter, periplasmic basic amino acid-binding protein [Pseudomonas fluorescens Pf-5] Length = 258 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 91/264 (34%), Gaps = 21/264 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +S L L +L +S L+ GI FA A G GFD Sbjct: 1 MKKLPLISGLALSLLACSSLFAAEKT---------LRLGIEAAYPPFAFKTAEGKIGGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + + K +++ +L+ K+ID + T R + F Sbjct: 52 YDIGNALCAQM---QVKCEWIEGEFDGLIPSLKVKKIDAALSSMTITAERRK--SVDFTH 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 YF +M K + L G ++ VQ TTT+ + F+ +K + + Sbjct: 107 KYYFTSSRLVMKKGAEVDDQYASLKGKTVGVQRSTTTDRYATEVFEPKGIK--VVRYSNN 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI----ISKSPLAPAIIQGDT 235 EEI A R DA D L + + P++ A+ +G++ Sbjct: 165 EEIYMDLAAGRLDAIFADSIPLADFLSMPRGAAYAFVGPELKDPKYVGEGAGIAVRKGNS 224 Query: 236 EWYNIVSWTHYAMVTAEELGITQK 259 E ++ + E Q Sbjct: 225 ELVGELNKAIEDIRANGEYQKIQA 248 >gi|188533323|ref|YP_001907120.1| histidine-binding periplasmic protein [Erwinia tasmaniensis Et1/99] gi|188028365|emb|CAO96226.1| histidine-binding periplasmic protein [Erwinia tasmaniensis Et1/99] Length = 260 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 87/279 (31%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + + S L+ G + F A G GFD Sbjct: 1 MKKQVLALSLLMAMTAAGSAFAAGP--------KTLRIGTDPTYAPFEMKNAQGQLTGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + +K ++ + +L++K++D + + T R +AF Sbjct: 53 IDLANEICRRM---ETKCTFVESDFDALIPSLKAKKVDAIISSLSITAKR--QQEIAFSE 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G +I + GTT E + ++ + P + Sbjct: 108 KLYAANSRLIAPKGSKIEPTLDSLKGKTIGLLQGTTQETYANENWRPKGITVTP--YANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + A R DA D A L ++ + + + + + Sbjct: 166 DLVYQDLTAGRIDAAFQDEVAASEGFLKQPAGKDYAFAGPAVKDEKIFGVGTGMGLSKDN 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 + + EE+ +++K + DV Sbjct: 226 PDLKAAIDKAF------EEMRKDGT-YAKLAKKYFDFDV 257 >gi|186475671|ref|YP_001857141.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184192130|gb|ACC70095.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 304 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 87/235 (37%), Gaps = 7/235 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQY 80 L I G + G+ + F+ + G+ A+ I +++ Sbjct: 34 GTLKKIHDDGVITLGVREASIPFSYFNGDRTI-GYSQSIALAIVDDIKKTLAMPDLRVRE 92 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ + RF+ L + QID+ +T T RE F + I K GI+ Sbjct: 93 VPITSANRFMMLANNQIDLECGSTTHTRERESVAA--FSNSFFQYAVRMIARKNAGITDF 150 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G + AGT+ E + + + + AA +A R A+ D Sbjct: 151 PDLAGKPVVTTAGTSDERLVRQLNSEKQLNMRIASAKDHADAFAAVKADRAVAFVMDEPI 210 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 LY + T+ RP + ++ + A +GD + +V+ M T+ E Sbjct: 211 LYGFRATDPRPDDFIVTGTPLGYETYACMFRKGDAPFRELVNRVISKMQTSGEAE 265 >gi|298501903|ref|YP_003723843.1| amino acid ABC superfamily transporter ATP-binding protein [Streptococcus pneumoniae TCH8431/19A] gi|298237498|gb|ADI68629.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pneumoniae TCH8431/19A] Length = 302 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 15/261 (5%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 38 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 97 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R Sbjct: 98 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 152 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 153 DFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 208 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 209 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 268 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 E V T + + EL Sbjct: 269 KELKEAVDKTIQKLKESGELD 289 >gi|182683078|ref|YP_001834825.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae CGSP14] gi|182628412|gb|ACB89360.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae CGSP14] Length = 302 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 15/261 (5%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 38 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 97 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R Sbjct: 98 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 152 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 153 DFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 208 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 209 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 268 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 E V T + + EL Sbjct: 269 KELKEAVDKTIQKLKESGELD 289 >gi|116516177|ref|YP_815607.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae D39] gi|148990572|ref|ZP_01821694.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae SP6-BS73] gi|148994307|ref|ZP_01823571.1| hypothetical protein CGSSp9BS68_07232 [Streptococcus pneumoniae SP9-BS68] gi|148996519|ref|ZP_01824237.1| hypothetical protein CGSSp11BS70_07485 [Streptococcus pneumoniae SP11-BS70] gi|149007913|ref|ZP_01831491.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae SP18-BS74] gi|149010974|ref|ZP_01832279.1| hypothetical protein CGSSp19BS75_10978 [Streptococcus pneumoniae SP19-BS75] gi|149026543|ref|ZP_01836600.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae SP23-BS72] gi|168483584|ref|ZP_02708536.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae CDC1873-00] gi|168489417|ref|ZP_02713616.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae SP195] gi|168577053|ref|ZP_02722882.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae MLV-016] gi|194397217|ref|YP_002036822.1| ABC transporter substrate-binding protein [Streptococcus pneumoniae G54] gi|225860147|ref|YP_002741656.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae Taiwan19F-14] gi|298229081|ref|ZP_06962762.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255704|ref|ZP_06979290.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae str. Canada MDR_19A] gi|303254796|ref|ZP_07340896.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae BS455] gi|303259154|ref|ZP_07345132.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae SP-BS293] gi|303260911|ref|ZP_07346860.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae SP14-BS292] gi|303263238|ref|ZP_07349161.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae BS397] gi|303267650|ref|ZP_07353486.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae BS457] gi|303269996|ref|ZP_07355727.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae BS458] gi|307066785|ref|YP_003875751.1| amino acid ABC transporter/signal transduction system periplasmic domain-containing protein [Streptococcus pneumoniae AP200] gi|307126333|ref|YP_003878364.1| amino acid ABC transporter substrate-binding protein [Streptococcus pneumoniae 670-6B] gi|116076753|gb|ABJ54473.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae D39] gi|147757094|gb|EDK64133.1| hypothetical protein CGSSp11BS70_07485 [Streptococcus pneumoniae SP11-BS70] gi|147760536|gb|EDK67511.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae SP18-BS74] gi|147764610|gb|EDK71540.1| hypothetical protein CGSSp19BS75_10978 [Streptococcus pneumoniae SP19-BS75] gi|147924189|gb|EDK75290.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae SP6-BS73] gi|147927337|gb|EDK78369.1| hypothetical protein CGSSp9BS68_07232 [Streptococcus pneumoniae SP9-BS68] gi|147929230|gb|EDK80233.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae SP23-BS72] gi|172042957|gb|EDT51003.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae CDC1873-00] gi|183572029|gb|EDT92557.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae SP195] gi|183577300|gb|EDT97828.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae MLV-016] gi|194356884|gb|ACF55332.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae G54] gi|225727485|gb|ACO23336.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae Taiwan19F-14] gi|301801069|emb|CBW33736.1| putative extracellular amino acid-binding protein [Streptococcus pneumoniae INV200] gi|302598233|gb|EFL65279.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae BS455] gi|302637748|gb|EFL68234.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae SP14-BS292] gi|302639572|gb|EFL70029.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae SP-BS293] gi|302640472|gb|EFL70888.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae BS458] gi|302642819|gb|EFL73130.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae BS457] gi|302647011|gb|EFL77235.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae BS397] gi|306408322|gb|ADM83749.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Streptococcus pneumoniae AP200] gi|306483395|gb|ADM90264.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae 670-6B] gi|327390520|gb|EGE88860.1| bacterial extracellular solute-binding s, 3 family protein [Streptococcus pneumoniae GA04375] gi|332075780|gb|EGI86247.1| bacterial extracellular solute-binding s, 3 family protein [Streptococcus pneumoniae GA17570] gi|332077415|gb|EGI87876.1| bacterial extracellular solute-binding s, 3 family protein [Streptococcus pneumoniae GA41301] Length = 268 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 15/261 (5%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 4 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R Sbjct: 64 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 119 DFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 E V T + + EL Sbjct: 235 KELKEAVDKTIQKLKESGELD 255 >gi|15902145|ref|NP_357695.1| amino acid ABC transporter periplasmic amino acid-binding protein [Streptococcus pneumoniae R6] gi|15457638|gb|AAK98905.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae R6] Length = 265 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 15/261 (5%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 1 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R Sbjct: 61 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 115 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 116 DFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 171 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 172 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 231 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 E V T + + EL Sbjct: 232 KELKEAVDKTIQKLKESGELD 252 >gi|225855891|ref|YP_002737402.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae P1031] gi|225857977|ref|YP_002739487.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae 70585] gi|237649604|ref|ZP_04523856.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae CCRI 1974] gi|237821348|ref|ZP_04597193.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae CCRI 1974M2] gi|225720416|gb|ACO16270.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae 70585] gi|225725940|gb|ACO21792.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae P1031] Length = 268 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 15/261 (5%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 4 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R Sbjct: 64 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 119 DFSIPYYTAKNKLIVKKSDLTTYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVSKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 E V T + + EL Sbjct: 235 KELKEAVDKTIQKLKESGELD 255 >gi|171743317|ref|ZP_02919124.1| hypothetical protein BIFDEN_02448 [Bifidobacterium dentium ATCC 27678] gi|171278931|gb|EDT46592.1| hypothetical protein BIFDEN_02448 [Bifidobacterium dentium ATCC 27678] Length = 270 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 84/220 (38%), Gaps = 9/220 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 G ++ GI G NG + GFDVD + ++ + +I + +K+R Sbjct: 26 ADGKIRIGIKFDQPGLGFK-KNGTYVGFDVDVAKYVAKKLGYSEDQIVWKEAPSKQREAM 84 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICV 150 LQ+ +D + T R+ ++F + GQ ++ K I L+G +C Sbjct: 85 LQNGDVDFIVATYSITDERKKV--VSFAGPYFVAGQDLLVRKDETSIKGPEDLNGKRLCS 142 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 G+T+ +T+ + F + + + E A + DA T D L L Sbjct: 143 VTGSTSAVTVKEKFAS---EVQLMEQPGYAECATALFSGIVDAVTTDDIILAGLASAAR- 198 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 ++ ++ I +GDT+ ++ M+ Sbjct: 199 -GRLRVVGKPFTQEYYGVGIKKGDTQLATKINNAIADMIQ 237 >gi|323144241|ref|ZP_08078872.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Succinatimonas hippei YIT 12066] gi|322415993|gb|EFY06696.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Succinatimonas hippei YIT 12066] Length = 254 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 82/259 (31%), Gaps = 27/259 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F C + L S A LK G + F V + G GFD Sbjct: 8 MKKVF---AACALALSAFCVSAQADT---------LKVGSHPTFAPFEFVDSEGKAIGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ A + ++ + + AL + QID + T R+ + F Sbjct: 56 IDLINAIAKA---NGDTVEIVSMPFDGLIPALVTNQIDAIISGMTITDARKE--RVEFTD 110 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y Q ++ K V L G IC Q GTT + A + I Sbjct: 111 GYYKSIQSVLIRKADAEKFKKVEDLKGQKICTQIGTTGDKF------ARTLSEDVIAMNN 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGDTE 236 + R C A D L + + D + +P A+ + + Sbjct: 165 EPDALMELRNGGCAALINDRPTNLYYLLQSKATEIGELKDDSLYLNPEFYGIAVNKNNKA 224 Query: 237 WYNIVSWTHYAMVTAEELG 255 ++ + + EL Sbjct: 225 LVKRLNAGLEKIAASGELK 243 >gi|307711103|ref|ZP_07647525.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] gi|307617065|gb|EFN96243.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] Length = 268 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 84/261 (32%), Gaps = 15/261 (5%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 4 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R Sbjct: 64 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV L+ + Q G+ E D + Sbjct: 119 DFSTPYYTSKNKLIVKKSDLATYQSVKDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 E V T + + EL Sbjct: 235 KELKEAVDKTIQKLKESGELD 255 >gi|89214058|gb|ABD64370.1| amino acid ABC transporter [Pseudomonas chlororaphis] Length = 295 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 88/247 (35%), Gaps = 11/247 (4%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F + L L + +A+ L D+ RG LK + F V + +G Sbjct: 1 MTKRFSALLSALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + F Sbjct: 61 DIDTAKLLADQL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGXNPEREKV--IDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + ++++ L G +I V G ++ L FE Sbjct: 116 QAYAPFYLAVFGPPEAPVATLDDLKGKTISVTRGAIEDIELTAVAPQ---GVTIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A ++ P + + SP+ + + E + Sbjct: 173 NSTIAAYLAGQVDLIASGNVVMVA--ISERNPKRIPAMKVKLKDSPVYVGVNKNQPELLD 230 Query: 240 IVSWTHY 246 V+ Sbjct: 231 KVNQILT 237 >gi|239979493|ref|ZP_04702017.1| putative ABC transporter solute-binding protein [Streptomyces albus J1074] Length = 312 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 81/230 (35%), Gaps = 14/230 (6%) Query: 22 TNASILGDIKKRG----FLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS 76 + L IK R L GI+ + G +GFD+D RA++ + DP Sbjct: 58 AEGATLERIKSRTDKPRKLIVGIDQNSYRWGYRDPATGSLEGFDIDLVRAIAEELMGDPE 117 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 + + + R A+ S ++D++ R T + +AF + GQ ++ K Sbjct: 118 AVVFRAIPTNRRVQAIDSGEVDMVVRTMTITC--DRIKEVAFSTAYFETGQQLLVPKGSR 175 Query: 137 IS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ + L G +C AG+T L + + + + + DA Sbjct: 176 ITGHDTSLKGRKVCAAAGSTA---LTELEREAHGADISTTVPNQLDCLVRLQLGEVDAVV 232 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D + + ++ + ++ A+ + + V+ Sbjct: 233 TDSALAAGQAAQDP---MVELVGEPFTEEFYGVAMHKDAKDLVARVNQVL 279 >gi|116873682|ref|YP_850463.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742560|emb|CAK21684.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria welshimeri serovar 6b str. SLCC5334] Length = 486 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 105/279 (37%), Gaps = 24/279 (8%) Query: 1 MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I F+ + T L I+++G L G++ + Sbjct: 1 MQKHVLQKFAAILLIFIFVFSGFTTVFAADTGDETLKKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV + ++ + K+ +N +L++ ++D++ T Sbjct: 61 TIDGKDKVVGFDVSIAKKIAKDL---DVKLDIKEMNFDSLLGSLKTGKVDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F F Q ++ K K +SV+ +G + Q TT E D K Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVVKKTDKDKFTSVNDFNGIKVGAQKQTTQE----DLAKN 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ A + A + + I + SK Sbjct: 172 ELIGSDVVSLQKVPDLILNLKSNKMKAVVLEGPVAEAYISQDKTLALADIKFENGSKE-T 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 A A+ +G T V+ + + L Q+ N++ Sbjct: 231 AIAMPKGSTALQEKVNTSIKDIQDTGLLKKYQEEANKLM 269 >gi|90962416|ref|YP_536332.1| glutamine-binding protein [Lactobacillus salivarius UCC118] gi|301299224|ref|ZP_07205511.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus salivarius ACS-116-V-Col5a] gi|90821610|gb|ABE00249.1| Glutamine-binding protein [Lactobacillus salivarius UCC118] gi|300215039|gb|ADJ79455.1| Glutamine-binding protein [Lactobacillus salivarius CECT 5713] gi|300853184|gb|EFK80781.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 276 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 93/254 (36%), Gaps = 18/254 (7%) Query: 1 MY---KDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVK-AN 53 M K + L+I F + A+I ++ + G+ F + Sbjct: 1 MKNLRKVTLLFSALLMIFFLGACGKKDKAANIAQRTEQTKTVTWGVKADTRLFGLMNIKT 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G +GFDVD +AL+ ++ +K++ + AK + L+++ ID + T R Sbjct: 61 GQIEGFDVDMAKALTKKMYGKDAKVKLVQTTAKTKIPLLKNQNIDAVIAAMTITPERRKI 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKY 171 + F + GQ ++ I +V L G + GTT + + Sbjct: 121 --VEFSQPYFAAGQSLLVPDNSTIKNVHDLDKKGMVVLAVKGTTAVANIHKFAPKAK--- 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + F+ + A ++ + A + D L + + P + ++ + P A+ Sbjct: 176 -VLEFDDYGQAFTALKSGQGQAMSTDNGILAGIAS--ENPG-YQVVGGNFTNEPYGIAVD 231 Query: 232 QGDTEWYNIVSWTH 245 +G T+ + Sbjct: 232 KGQTQMMKRIDKAL 245 >gi|324113638|gb|EGC07613.1| extracellular solute-binding protein 3 [Escherichia fergusonii B253] Length = 288 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 84/241 (34%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V L L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 36 VMALALVAGMSAKTFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 95 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 96 LAKHLGVEA---TLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTVSG 150 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + + L G + V GT E ++ + + ++ Sbjct: 151 IQALVKKGNEGTIKTANDLKGKKVGVGLGTNYE----EWLRQNVQGVDIRTYDDDPTKYQ 206 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + D S+ A+ + + + V+ Sbjct: 207 DLRVGRIDAILVDR--LAALDLVKKTKDTLAVTGDAFSRQESGVAVRKNNEDLLKAVNEA 264 Query: 245 H 245 Sbjct: 265 I 265 >gi|306833815|ref|ZP_07466940.1| polar amino acid uptake family ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus bovis ATCC 700338] gi|304424009|gb|EFM27150.1| polar amino acid uptake family ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus bovis ATCC 700338] Length = 273 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 93/281 (33%), Gaps = 18/281 (6%) Query: 1 MY-KDFFVSILCL---IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKAN 53 M K F+ IL L + L S+N ++ I K+G L I+ F V Sbjct: 1 MKIKKIFLGILALISVLTLAACGSSSNENLQEKIVKKGKLVVAISPDYAPFEFKALVDGK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G DV+ +A++ + + ++ ++ +LQ+ + D+ +T R Sbjct: 61 DTIVGADVELAQAIADELGVE---LELSSMSFDNVLSSLQTGKADMAISGLSYTEERAKV 117 Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F Y ++ +SV LSG + VQ GT E D Sbjct: 118 --YDFSDAYYETENAILVKASDADTYTSVDSLSGLKVAVQKGTIEEGLAKDQL----SDS 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + + E ++ + A + N + + A A+ Sbjct: 172 NIVSLTAMGEAINELKSGQVQAVDLEKPVAEGYLSQNSDLALASFALETGEGDAKAVAMP 231 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + E V+ + ++ + Q++ D + D Sbjct: 232 KDSGELVKTVNKVIKKLAKEDKYKQFISDAAQLTGDAVDED 272 >gi|218548543|ref|YP_002382334.1| cystine transporter subunit [Escherichia fergusonii ATCC 35469] gi|218356084|emb|CAQ88701.1| cystine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia fergusonii ATCC 35469] Length = 266 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 84/241 (34%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V L L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 14 VMALALVAGMSAKTFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 74 LAKHLGVEA---TLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTVSG 128 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + + L G + V GT E ++ + + ++ Sbjct: 129 IQALVKKGNEGTIKTANDLKGKKVGVGLGTNYE----EWLRQNVQGVDIRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + D S+ A+ + + + V+ Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTKDTLAVTGDAFSRQESGVAVRKNNEDLLKAVNEA 242 Query: 245 H 245 Sbjct: 243 I 243 >gi|154246016|ref|YP_001416974.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154160101|gb|ABS67317.1| extracellular solute-binding protein family 3 [Xanthobacter autotrophicus Py2] Length = 269 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 78/233 (33%), Gaps = 10/233 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 S + A L DI K G ++ + F V + G+D+D +++ + Sbjct: 25 VALSTAARADTLDDIMKAGVIRIAVPQDFPPFGSVGVDLKPLGYDIDVANLIAAKLGVKA 84 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 + + + R LQ+K++D++ + RE + F G Sbjct: 85 ELVP---VTSANRIPYLQTKKVDLVISSLGKNPEREKVM--DFSVAYAPFFNGIFGPADV 139 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + V ++G ++ V G+ +L L +E +A+ + + Sbjct: 140 KVEKVEDIAGMTVGVTRGSVEDLELTKVAP---PTADIKRYEDNNSTISAFLSGQVKVVA 196 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 A+ P + + +I SP + + + + V+ A Sbjct: 197 TGNVVAAAILAR--NPPKKPQVKVLIKNSPCYVGLNKDEPKLLEKVNAIITAA 247 >gi|302526883|ref|ZP_07279225.1| predicted protein [Streptomyces sp. AA4] gi|302435778|gb|EFL07594.1| predicted protein [Streptomyces sp. AA4] Length = 495 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 89/247 (36%), Gaps = 16/247 (6%) Query: 5 FFVSILCLIILFFTSFSTN---ASILGDIKKRGF-LKCGINTGLVGFAEVKANGDWKGFD 60 +L + + + S L ++ L+ G + F A G GFD Sbjct: 14 LLACLLAFLPMSAATASAAEPQGGKLAALRSGQTALRVGTDATFPPFEFTDAKGGQLGFD 73 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D RAL+ K+ ++ + ALQ+ QID+ + + R+ + F Sbjct: 74 IDLVRALAQRAG--IKKVDFVQMPFGNIVPALQANQIDVGASAIYISPARQK--AVDFSD 129 Query: 121 ITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I Y G F+ K ++S+ L+G + VQ GT + LA + A I + Sbjct: 130 IYYPGGLAVFVSDKDNSVASLKDLAGKRVAVQVGTKSVDWLAQHQPAA----QLITAQTN 185 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E++ ++ + + DA A + D +++ A + D E Sbjct: 186 EQMFSSVKLGQADAVVTGAPAGKYFIAQQGG---LKQVGDRLTEENYGYAFQKADPELRT 242 Query: 240 IVSWTHY 246 + Sbjct: 243 AFNAALK 249 >gi|317486431|ref|ZP_07945258.1| bacterial extracellular solute-binding protein, family 3 [Bilophila wadsworthia 3_1_6] gi|316922341|gb|EFV43600.1| bacterial extracellular solute-binding protein, family 3 [Bilophila wadsworthia 3_1_6] Length = 268 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 88/255 (34%), Gaps = 11/255 (4%) Query: 1 MYKDFFVSILCLIILF-FTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F V +L ++ + + +A + D+ KRG L+ G + V +A NG++ Sbjct: 1 MKKFFAVLMLAAALILPGLAQAKDAQTSMIDDVVKRGVLRVGFS-SFVPWAMQDKNGEFV 59 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GF++D + L+ + + +Q +P AL + + D++ + T R + Sbjct: 60 GFEIDVAKRLAKDLGVE---LQLVPTKWAGIIPALMAGKFDVIIGSMSVTPERNLKANFT 116 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 K KG+ + + V T + K +F+ Sbjct: 117 VPYDYATIEVMANKEKTKGMKFPEDFNKPEVVVALRTGSTPV--PVAKKVLPNATFRLFD 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D L N + D + P+ I +GD + Sbjct: 175 DEAPAVQDVLSGRADVMFSSAPLPAFEVLRNPDKL-YQPSTDAFYRQPVGMVIRKGDPDS 233 Query: 238 YNIVSWTHYAMVTAE 252 N++ V AE Sbjct: 234 LNVLDNWIR-TVEAE 247 >gi|310640332|ref|YP_003945090.1| cystine abc transporter [Paenibacillus polymyxa SC2] gi|309245282|gb|ADO54849.1| Cystine ABC transporter [Paenibacillus polymyxa SC2] Length = 285 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 84/270 (31%), Gaps = 28/270 (10%) Query: 2 YKDFFVS---ILCLIILFFTSFS-----------------TNASILGDIKKRGFLKCGIN 41 K F V+ L L L ++ A+ L IKK +K G+ Sbjct: 5 KKGFLVTTLMALALFSLVLSACGTKPEASNTSNGAGSSNEAAANQLEAIKKADVMKVGMM 64 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 + + N + GFDVD + L+ I + +LQ K+ D + Sbjct: 65 GTYPPYNFLNDNKELDGFDVDIAKELAKRIGVKAE---FTAQEFSGLIPSLQKKKFDAVV 121 Query: 102 RNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 T R+ + F + + K I+++ G +I V GT E L Sbjct: 122 SQVAITEDRKK--AIDFTDPYITNNVNIIVNSKTNDITTLEDFKGKTIGVGLGTNDESYL 179 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 + + ++ V + R DA + + + + + + Sbjct: 180 RNEVLPKVGDFEIKTYDDVITSLKDLNSGRIDATINN--LYALKPIIDKNGFQIKAVGEP 237 Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 I A AI Q E ++ M Sbjct: 238 IKSDQAAVAINQKTPELKAALNKALKEMKE 267 >gi|268610257|ref|ZP_06143984.1| extracellular solute-binding protein family 3 [Ruminococcus flavefaciens FD-1] Length = 292 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 78/226 (34%), Gaps = 9/226 (3%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + L +I +G L G++ N + GFD+D + + + + + K Sbjct: 51 AAEGDQSLQNILDKGELVLGLDASFPPMGFTDENNEIIGFDIDVAQEVCNRMGVELVK-- 108 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 P+N + L+ +ID + R ++ L + F++ + S Sbjct: 109 -QPINWDTKEEDLKVGKIDCIWNGMSINPARAEAMNL--SDPYMKNEMIFVVPADSEVKS 165 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G ++ VQ G+T + L + K + P+ + DA D Sbjct: 166 MDDLEGKTVGVQTGSTAQEILEAWDKFDTITESPLE--ENVTALSQMELGFSDAVFLDS- 222 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + A ++V+L + A + D + V T Sbjct: 223 -VVANYFITSNNKDYVVLDGNLEAEEYAIGFRKEDQALRDEVQKTL 267 >gi|167587662|ref|ZP_02380050.1| extracellular solute-binding protein family 3 [Burkholderia ubonensis Bu] Length = 266 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 85/237 (35%), Gaps = 14/237 (5%) Query: 17 FTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +K+ G L+ G+ F +G +GFDVD +A+++ + Sbjct: 19 FTAVAAHAEDLLDSVKQAGVLRIGLEGTYPPFNSRGTSGQLEGFDVDVAKAVAAKLGVKT 78 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 Q++P LQ+ + D++ T R+ L F + I K Sbjct: 79 ---QFVPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEV--LDFSQPYTYSAAQLIQRKDD 133 Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 S+ G + V GT D + E A R +A Sbjct: 134 KRDFKSLEDFKGKKLGVTLGTNY-----DQMARAVPGIEVQTYPGAPEKLRDLAAGRIEA 188 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 D L + T++ P + + + +A +G+ ++ ++ ++ Sbjct: 189 TLDDRLMLPYMIKTSNLPLRAGAVLNGGKQE-MAIPFRKGNPKFEKAINDALTSLKQ 244 >gi|291448799|ref|ZP_06588189.1| glutamate binding periplasmic protein [Streptomyces roseosporus NRRL 15998] gi|291351746|gb|EFE78650.1| glutamate binding periplasmic protein [Streptomyces roseosporus NRRL 15998] Length = 308 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 47/228 (20%), Positives = 90/228 (39%), Gaps = 10/228 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++ K+RG L G E +G + GFD++ R +++++ +P I++ Sbjct: 56 DSRTWTKAKRRGHLVVGAKEDQPYLGEKDPASGIYSGFDIEIARMMAASLGFEPKTIRFR 115 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + + R ALQ+ QID +R+ +G F Y GQG ++ I+ Sbjct: 116 TIASANRETALQNGQIDYYVGTYTINDMRKKLVG--FAGPYYMAGQGLLVRTDEDDINGP 173 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G ++C AG+T +A + + ++ ++ DA T D + Sbjct: 174 QDLAGKTVCSAAGSTPYQRIAADYPKA----TLVAYDTYSICVDNLLTYQVDAVTTDDAI 229 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 L P E ++ S+ P + + D N ++ A Sbjct: 230 LLGFAAKA--PEEMKVVGKPFSEEPYGIGVPRSDNALRNALNDALEAN 275 >gi|330879084|gb|EGH13233.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 258 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 73/211 (34%), Gaps = 8/211 (3%) Query: 4 DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDV 61 + ++ F+ L IK+ G + G + F+ + A+G G+ Sbjct: 50 HLLGVAITAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGVPMGYSH 109 Query: 62 DFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 D + AI D K++Y + ++ R +Q+ +D+ +T + R + Sbjct: 110 DIQLKIVEAIKKDLDMPDLKVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVER--QQQVD 167 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + G + K L G ++ AGTT+E L M + I + Sbjct: 168 FSIGIFEVGTRLLSKKDSSYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVISAK 227 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 E + R A+ D + L Sbjct: 228 DHGESFQMLESGRAVAFMMDDALLAGEMAKA 258 >gi|298291224|ref|YP_003693163.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296927735|gb|ADH88544.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 270 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 86/262 (32%), Gaps = 16/262 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +L ++ F + + + + IK+RG L G+ F +G G + Sbjct: 1 MRRSMIALLLAGVLAPFAAQAADG--VDAIKQRGTLIVGVKADYKPFGFRDPSGAVVGIE 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D ++ + + + + R LQ ++D+L R + P Sbjct: 59 PDLAADVAKRLGVKLELVPVV---SSNRIEFLQQGKVDMLIATMSDKPERRKVVQAIDPP 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + K G+ S+L G +C +G +A + F+ E Sbjct: 116 YYSDFVNVLLPKKA-GVKDWSELKGKPLCATSGAWYNKEIAQ-----KYGVEIVAFDGSE 169 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + C Y D + + L + ++ + + +P A+ G+ Sbjct: 170 KPLFALKQGNCVGYVYDQTFVQGKLLDAEWSGDYEMPLKGVLDAPWIMAVALGNDTLQKF 229 Query: 241 VSWTH-----YAMVTAEELGIT 257 + T + AEE Sbjct: 230 LEDTTKDWMKTGFIVAEEKKYG 251 >gi|295675491|ref|YP_003604015.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295435334|gb|ADG14504.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 278 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 96/264 (36%), Gaps = 20/264 (7%) Query: 5 FFVSILCLIILFFT--------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 F ++ L+ + + + S L + +RG L+ G F +G Sbjct: 12 FLFAVAGLLAITGCTKVATPEQGAAASPSTLQGVLQRGTLRVGDCLTFAPFGFYNKDGQP 71 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G+DVD + L+ + + + R LQ+ ++D++ N L R + Sbjct: 72 DGYDVDLAKELAKQMGVKLEVVN---TTSANRIPNLQTSKVDVVFCNFTRNLERAKV--I 126 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + ++ K GI S+ +SG +I G+T D ++ N+ + Sbjct: 127 EFTAPYVVASEALLVRKNSGIQSIKDMSGRTIATVKGSTN----GDEVRSLNIPVKIQEY 182 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + A + + DA D + L P V ++ A + GD E Sbjct: 183 DSSQAAILAVKQGQADAMIEDNNFLAYQAKL--DPELAVTNEALVPLEYNAFGVKAGDQE 240 Query: 237 WYNIVSWTHYAMVTAEELGITQKN 260 W N ++ + V A +L N Sbjct: 241 WLNYLNLFLF-NVNASKLNAQLYN 263 >gi|315304435|ref|ZP_07874723.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria ivanovii FSL F6-596] gi|313627196|gb|EFR96041.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria ivanovii FSL F6-596] Length = 486 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 103/279 (36%), Gaps = 24/279 (8%) Query: 1 MYKDFFVSILCLIILF---------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K+F + + ++F + L I+++G L G++ + Sbjct: 1 MQKNFLQKLAAIALIFIFVFSSFNTVFAADKQDETLTKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + + GFDV + ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDEIVGFDVSIAKKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F F Q ++ K +SV+ +G + Q TT E + Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVVRKADKEKFTSVNDFNGVKVGAQKQTTQEELAQNEL-- 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 174 --IGSDVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYLSQDKTLAMADIKFVNGSKE-T 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 A A+ +G T + V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQDKVNASIKEIQDTGLLKDYQKEANKLM 269 >gi|332041198|gb|EGI77563.1| extracellular solute-binding protein [Hylemonella gracilis ATCC 19624] Length = 264 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 79/247 (31%), Gaps = 7/247 (2%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + ++ F + + L G + F A G+ GFD+ Sbjct: 7 KRSTLKLAALVLAGFAIAGLAACGKKEEAAPAKALVVGTDAAYAPFESQDAQGNIVGFDI 66 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +A+++ + +++++ + F L D+L T R+ + F Sbjct: 67 DVVKAIAA---NQGLEVKFVNTPWEGIFNTLAQGDRDLLVSAITITAERK--QTMDFSNP 121 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + Q + +K ++ + + + VQ GTT + + + FE Sbjct: 122 YFDAKQLIAVAEKSTVTKFADIKTLKVGVQTGTTGDDVVQGLLGK--DSANIKRFESTPL 179 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A A D + N + D + A+ +G+TE + Sbjct: 180 ALKELEAGGVQAVVADNGVVENYVNNNANFKFKTVSDDSFTPEQYGIAVRKGNTELLEKI 239 Query: 242 SWTHYAM 248 + A+ Sbjct: 240 NKGLAAI 246 >gi|148558450|ref|YP_001257614.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella ovis ATCC 25840] gi|148369735|gb|ABQ62607.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella ovis ATCC 25840] Length = 257 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 85/248 (34%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L ++L + + + K+ ++ F + +G GFD Sbjct: 1 MLKSLVLAGLASVVLTVSVQAPVQA-----KEWKEIRIASEGAYPPFNYMSPDGKLVGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL A+ +K + + LQ+ + D + + T R+ + F Sbjct: 56 LDIANALCEAM---EAKCTIVANDWDGMIPGLQANKFDAVIASMAITDERKKQVA--FTD 110 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y ++ K I S S +G + QAGTT D + ++ Sbjct: 111 RYYTPPLAVVVPKDSDIVSLEPSAFAGKMVGAQAGTTQGNYADDVYGKAGAD--VKLYPT 168 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E +A + R DA D + S++ +A A+ QGD + Sbjct: 169 ADEANADLESGRLDALAADKFIAADWLKKQGADCCKFLGDIPGSETQIAVALRQGDDDLR 228 Query: 239 NIVSWTHY 246 + Sbjct: 229 EQFNAAIK 236 >gi|227818415|ref|YP_002822386.1| amino acid ABC transporter substrate-binding protein [Sinorhizobium fredii NGR234] gi|227337414|gb|ACP21633.1| putative amino acid ABC transporter, substrate-binding protein [Sinorhizobium fredii NGR234] Length = 278 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 95/257 (36%), Gaps = 14/257 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + ++ ++ + A L DI ++CG + FA + + GF Sbjct: 1 MKLKSW-TLGAALVATAIAGPAKADKLADITAAKVIRCGTFADVPPFAAPDPSTREMAGF 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C A++ + PL+ + R ++ +DI N +TL R + F Sbjct: 60 DVDLCNAIARELGVKAE---IKPLSVEARVPEVKLGHVDIAVANLAYTLSRAEQIQ--FS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + I+ + +G + G+T+EL + + P+ F+ Sbjct: 115 HPYYLAKEMLIVKADDPGQKKADFAGVRLASTKGSTSELAIR------KNESKPLTFQDT 168 Query: 180 EEIDAAYRAHRCDA-YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 A + + ++ +K + + +E ++ + + P+ + + + Sbjct: 169 GSAYLAVQQGKARGLVANTMTTTKIVKESKTKGAEMRMIEEPMLFQPIGIGMKKDEPALT 228 Query: 239 NIVSWTHYAMVTAEELG 255 ++ A+ T+ E+ Sbjct: 229 AKINEILVALDTSGEIN 245 >gi|261210507|ref|ZP_05924800.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. RC341] gi|260840292|gb|EEX66863.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. RC341] Length = 258 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 89/254 (35%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + + K+ ++ GI F+ +++G KGFD Sbjct: 1 MKKWLVATALIATTISGVTQA---------KEWKTVRFGIEGAYPPFSWTESDGSLKGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + + +P + +L +++ D + T R+ + F Sbjct: 52 VDMANALCTEMNVE---CKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 106 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 FI K + + L G I VQ TT + ++D + + + Sbjct: 107 KYALIPNKFIAKKGANLAFTKEGLKGVKIGVQRATTHDKYISDNY---GDSVDIVRYGSF 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E R A GD SAL L + + ++ + A+ + D Sbjct: 164 DEAYLDLANGRIAAVLGDASALEEGVLNKAGGDAYEFVGPSLTDPKWFGEGMGIAVRKQD 223 Query: 235 TEWYNIVSWTHYAM 248 + ++ A+ Sbjct: 224 KDLTEKLNAAITAL 237 >gi|90412871|ref|ZP_01220871.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium profundum 3TCK] gi|90326230|gb|EAS42657.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium profundum 3TCK] Length = 258 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 86/251 (34%), Gaps = 23/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + + + K+ ++ GI F+ + +G+ KGFD Sbjct: 1 MKKWILAAAMVSALGATSLQA---------KEYKEVRFGIEGAYPPFSWTEPSGELKGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + + + +L +++ D + T R+ + F Sbjct: 52 VDMANALCKEL---QTKCKIVAQDWDGIIPSLLARKYDAIIAAMSITEERKK--KIDFTG 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F+ K I + L G I VQ TT + L D + + + Sbjct: 107 KYALIPNKFVAKKGTEIDFTKEGLKGVKIGVQRATTHDKYLTDNY---GDSVTIVRYGSF 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 ++ +A R + GD SAL + + + + ++ A+ + D Sbjct: 164 DDAYLDLKAGRIASVLGDASALEEGLINKEGGEGYEFIGPSLTDPKWFGEGFGIALRKQD 223 Query: 235 TEWYNIVSWTH 245 E + Sbjct: 224 KELTKKLDAAI 234 >gi|300780393|ref|ZP_07090249.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium genitalium ATCC 33030] gi|300534503|gb|EFK55562.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium genitalium ATCC 33030] Length = 339 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 10/218 (4%) Query: 29 DIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 DI KRG L G++ + A G+ +GF+VD R ++ IF DP K+ + + + Sbjct: 81 DIVKRGRLIVGVDQSQYLLSFRDNATGELRGFEVDLAREIARDIFGDPDKVDFRFVESTM 140 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R ALQS Q+D++ R T RE + + F ++ GI SV + Sbjct: 141 RTEALQSGQVDVVIRTMSIT--RERAEKVDFSVPYLDSSVRMLVPAASGIESVEDVGDER 198 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +CV G+ + D ++ + + + A + + GD + L Sbjct: 199 VCVADGS----NVVDMARSTFPEQEVLRTRTWTDCLMAMQQFQAGFILGDETILAGAAAQ 254 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + + +++ A I +G V+ T Sbjct: 255 DP---LTTVTGEAVAEQQYAIGIPKGYDGLTRQVNSTL 289 >gi|284048019|ref|YP_003398358.1| extracellular solute-binding protein family 3 [Acidaminococcus fermentans DSM 20731] gi|283952240|gb|ADB47043.1| extracellular solute-binding protein family 3 [Acidaminococcus fermentans DSM 20731] Length = 259 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 73/235 (31%), Gaps = 14/235 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K + L L + K++ +K G F + + ++ GF Sbjct: 1 MKK-ISAVMCVLAALMLAVAGCGSDTKQAAKEQKVIKVGTEPTFAPFEFQEKGSKEFTGF 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D RA+ + ++ + AL S ID+ + T R+ + F Sbjct: 60 DMDLARAIGKKLGKK---VEIQNMGFDALIPALNSGNIDVAAAGMSITDERKK--AVTFS 114 Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ K + S+ L G I VQ GTT A F Sbjct: 115 DPYYTSGLVVVVTKDNDGVKSIKDLEGKKIAVQIGTTGADKAGKVPGAK-----VTSFNT 169 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 E+ DA D + + + I+ D + A + Sbjct: 170 NAEVFLELENKGVDAVIIDKPVAQYYLIKEGKDKD-KIVGDTMDAESYGFAFKKD 223 >gi|293605798|ref|ZP_06688171.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292815793|gb|EFF74901.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 273 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 100/276 (36%), Gaps = 13/276 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59 M + + + + + A + DIK RG L CG F+ A G+ Sbjct: 1 MKRHTYFAACLGLATLALGAAAQADQVDDIKARGELICGTLGTSQPFSFQDGATRQLVGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C+ ++ + I Y L+ R L ++DIL+ N + + +AF Sbjct: 61 DVDVCKLVADKLGVK---INYKLLSVAARVPELNEGRVDILAANLG--YSPDRAEQIAFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y Q ++ K G+ ++ L+G I G+++E + K I + Sbjct: 116 HAYYVSPQKLLVRKDSGLDTIEALNGRRIGATKGSSSEREIKRIL----NKSQVIGYGDS 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A + + DA L L L + + ++ + P + + + Sbjct: 172 SATYLALQQKKVDAQFASELVLVRLVLQSPPTAPVSVIAKSVFDEPWGLGVRKSEPRMLQ 231 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 V+ A+ AE G ++ TT ++R Sbjct: 232 TVN---QALDEAESSGAAATLFDKWFGPTTPYKLER 264 >gi|163844781|ref|YP_001622436.1| hypothetical protein BSUIS_B0628 [Brucella suis ATCC 23445] gi|163675504|gb|ABY39614.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 257 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 86/248 (34%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L ++L + + + K+ ++ F + +G GFD Sbjct: 1 MLKSLVLAGLASVVLTVSVQAPVQA-----KEWKEIRIASEGAYPPFNYMSPDGKLVGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL A+ +K + + +LQ+ + D + + T R+ + F Sbjct: 56 LDIANALCEAM---EAKCTIVANDWDGMIPSLQANKFDAVIASMAITDERKKQVA--FTD 110 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y ++ K I S S +G + QAGTT D + ++ Sbjct: 111 RYYTTPLAVVVPKDSDIVSLEPSAFAGKMVGAQAGTTQGNYADDVYGKAGAD--VKLYPT 168 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E +A + R DA D + S++ +A A+ QGD + Sbjct: 169 ADEANADLESGRLDALAADKFIAADWLKKQGADCCKFLGDIPGSETQIAVALRQGDDDLR 228 Query: 239 NIVSWTHY 246 + Sbjct: 229 EQFNAAIK 236 >gi|315612254|ref|ZP_07887168.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] gi|315315647|gb|EFU63685.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] Length = 268 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 86/260 (33%), Gaps = 16/260 (6%) Query: 3 KDFFVSILCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 K +++ L++ L F +T + + IK +G L +N F V Sbjct: 5 KKVLITMFGLLMFPLLFACSNTQSQGVEAIKAKGKLVVALNPEFAPFEYQKLVDGKNQIV 64 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV+ +A++ + + +++ P++ +L S + D+ T R S Sbjct: 65 GSDVELAKAIAKELGVE---VEFSPMSFDNVLASLDSGKADLAISGVSKTEER--SQVYD 119 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K SV L+ + Q G+ E + + Sbjct: 120 FSIPYYTSKNKVIVRKSELTNYQSVKDLAQKKVGAQKGSIQETLAKETL----QDSSLVS 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + ++ + DA + N + D + A A+ + Sbjct: 176 LPKNGNLITDLKSGQLDAVIFEEPVAKGFVENNPDLAIAEFDFDNDKEDSYAVAMKKDSK 235 Query: 236 EWYNIVSWTHYAMVTAEELG 255 E V T + + EL Sbjct: 236 ELKEAVDKTIQKLKDSGELD 255 >gi|295692447|ref|YP_003601057.1| glutamine ABC transporter, glutamine-binding protein [Lactobacillus crispatus ST1] gi|295030553|emb|CBL50032.1| Glutamine ABC transporter, glutamine-binding protein [Lactobacillus crispatus ST1] Length = 272 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 87/234 (37%), Gaps = 10/234 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 L ++++ +K+ + G+ F G +GF++D +AL+ + Sbjct: 19 TLTACGQHASSNVYQKVKESKTIVWGVRADTRLFGLTNIKTGHIEGFEIDLAKALTKQML 78 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +K ++ A R L++ +D + T R + F + G ++ Sbjct: 79 GKDAKTDFVTTTANTRIPLLKNGNVDAVLATMTITPERAK--QVTFSKPYFPAGSSLLVP 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I +V L G ++ GTT + Y + ++ + +A +A++ Sbjct: 137 NNSKIKNVKDLEGKTVLAVKGTTAVDDVHKYAPKA----RILQYDDYGQAMSALKANQGV 192 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 A T D L + + P + ++ + S +P A+ +G + + + Sbjct: 193 ALTTDNGLLAGIAQ--ENPG-YKLVGGVYSNAPYGIAVNKGQKQMADHIDQALN 243 >gi|307709076|ref|ZP_07645535.1| arginine-binding periplasmic protein 1 [Streptococcus mitis SK564] gi|307620022|gb|EFN99139.1| arginine-binding periplasmic protein 1 [Streptococcus mitis SK564] Length = 271 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L F + + + S + IK++G L + F V Sbjct: 4 KKWIFVLCSFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + + A A+ + Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNADLAVATVSLKMKDGEANAVALRK 234 Query: 233 GDTEWYNIVSWTHY 246 + +V Sbjct: 235 NSADLKEVVDKVIQ 248 >gi|94986288|ref|YP_605652.1| extracellular solute-binding protein [Deinococcus geothermalis DSM 11300] gi|94556569|gb|ABF46483.1| amino acid ABC transporter substrate-binding protein, PAAT family [Deinococcus geothermalis DSM 11300] Length = 272 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 85/241 (35%), Gaps = 13/241 (5%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + L +L + A L IK G + G F + GF+ + AL+ Sbjct: 26 VLLTLLACALGTAAARDLAAIKASGTIYVGTEPTYAPFTYTQGK-KIVGFEAELAEALAK 84 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + +++ P + L + D++ + T R+ + F Y G Sbjct: 85 RMGVK---VEWRPSAFDTLLIGLNQDRFDMVISSHGITPERQK--AVDFAHPHYCSGGVI 139 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + + + +V L G ++ VQ GTT A + + + + Sbjct: 140 LARENGPL-TVDALQGKTVAVQLGTTY----AQRAQKLPGLSSVKTYPTNADALQMLLSG 194 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R DA+ D AL+ P + L ++ + + A+ +G+T + ++ M+ Sbjct: 195 RVDAFITDR--FVALEARKKFPQAGLKLGQLLFQEKIGIAVKKGNTPLVSAINQALQGML 252 Query: 250 T 250 Sbjct: 253 N 253 >gi|239945337|ref|ZP_04697274.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces roseosporus NRRL 15998] gi|239991794|ref|ZP_04712458.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces roseosporus NRRL 11379] Length = 294 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 47/228 (20%), Positives = 90/228 (39%), Gaps = 10/228 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++ K+RG L G E +G + GFD++ R +++++ +P I++ Sbjct: 42 DSRTWTKAKRRGHLVVGAKEDQPYLGEKDPASGIYSGFDIEIARMMAASLGFEPKTIRFR 101 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + + R ALQ+ QID +R+ +G F Y GQG ++ I+ Sbjct: 102 TIASANRETALQNGQIDYYVGTYTINDMRKKLVG--FAGPYYMAGQGLLVRTDEDDINGP 159 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G ++C AG+T +A + + ++ ++ DA T D + Sbjct: 160 QDLAGKTVCSAAGSTPYQRIAADYPKA----TLVAYDTYSICVDNLLTYQVDAVTTDDAI 215 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 L P E ++ S+ P + + D N ++ A Sbjct: 216 LLGFAAKA--PEEMKVVGKPFSEEPYGIGVPRSDNALRNALNDALEAN 261 >gi|253576766|ref|ZP_04854092.1| amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] gi|251843797|gb|EES71819.1| amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] Length = 261 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 14/245 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V L L +L S S K+ L GI+ N + GFD Sbjct: 7 MIMMSLVMALVLTVLAGCSGSGAG------KEDNKLVIGIDDKFAPMGFRDENNEIVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D+ +A + + + + P++ + L S +ID++ T R+ + F Sbjct: 61 IDYAKAAAEKMGMEA---TFQPIDWSAKESELNSGRIDLIWNGYTITEERKG--KVLFTK 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q + I+ +S L+G ++ +QA ++ D + F Sbjct: 116 PYLKNSQVVVTLADSEITQLSDLAGKTVGLQALSSAADA-LDAAPIKSEIKTISEFPDNV 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + R DA D + A +L + ++ + +G+ E N Sbjct: 175 LALTDLKTKRLDAVVIDE--VVARYYMAKEEGTFKLLDESLAPEEYGIGVKKGNEELLNK 232 Query: 241 VSWTH 245 + Sbjct: 233 LQKAL 237 >gi|258651818|ref|YP_003200974.1| family 1 extracellular solute-binding protein [Nakamurella multipartita DSM 44233] gi|258555043|gb|ACV77985.1| extracellular solute-binding protein family 3 [Nakamurella multipartita DSM 44233] Length = 282 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 90/251 (35%), Gaps = 13/251 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 + ++L L ++ + S+ + S + ++ G L GI+ G Sbjct: 5 RRGLVGAVLALTLVGLAACSSGSGSVGTPSTVSGAQEGGKLTIGISFDQPGLGFKDGE-T 63 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 ++GFDVD +++A+ I ++ + ER L+S +D++ + T R+ Sbjct: 64 YRGFDVDTATYVAAALGVPSQNITWVQADPSEREKLLESGDVDLVFSSYSITDQRK--QV 121 Query: 116 LAFRPITYF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F + + + I+ L G +C GTT+ + D + Sbjct: 122 VDFAGPYFVAHQDLLVRRNETDITGPDTLDGRVLCSVTGTTSSQYIKDNYLGR---ITLT 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + R + AA DA + D L + + ++ + + I +GD Sbjct: 179 EYPRFSDCVAALANSEVDAVSTDDVILAGFAAQDQYKGKLKLVGNGFTDERYGVGIPKGD 238 Query: 235 TEWYNIVSWTH 245 V+ Sbjct: 239 DARVAQVNQAL 249 >gi|126658585|ref|ZP_01729732.1| glutamine-binding protein of glutamine ABC transporter [Cyanothece sp. CCY0110] gi|126620172|gb|EAZ90894.1| glutamine-binding protein of glutamine ABC transporter [Cyanothece sp. CCY0110] Length = 260 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 81/245 (33%), Gaps = 12/245 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++ I A+ L DIK+RG L + + +G ++D Sbjct: 7 KKLVSVLIITAIFNVGDSKLIAATLEDIKQRGKLIVAVKDNIRPLGFRNQENKLQGLEID 66 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R L+ I DP + P++ +ER + ++D+ R + F P Sbjct: 67 LARQLAQDILGDPQAVVLQPVSNQERLQKVIDGEVDLAIARITINTSRGRI--VDFSPYY 124 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y DG G I + I S LS I V ++T + I +E Sbjct: 125 YLDGTGIITNNP-KIRSKYHLSQGKIAVLKRSSTIAVIRTEVPQA----ELIGVSSYQEA 179 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNI 240 + DA+ D S L ++ LP +S L + + + Sbjct: 180 MTLLETQQVDAFAADNSILTGWVQQYP---QYYQLPVRLSGEGLGVVMPKGLQYASLRSR 236 Query: 241 VSWTH 245 V+ Sbjct: 237 VNQAI 241 >gi|134298638|ref|YP_001112134.1| extracellular solute-binding protein [Desulfotomaculum reducens MI-1] gi|134051338|gb|ABO49309.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfotomaculum reducens MI-1] Length = 264 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 90/253 (35%), Gaps = 18/253 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKK------RGFLKCGINTGLVGFAEVKANG 54 M + F + L IL + + + K + L + F ++G Sbjct: 1 MKRIFKTVLTGLTILALALVAVGCTGKEEAKSPAQDTGKKKLVAAADATFAPFEFTDSSG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D A++ + + +++ + ALQS QID + T R S Sbjct: 61 KYVGFDLDLIAAIAEEMGYE---LEFQSIAFDGIIPALQSSQIDCAATAMTITPER--SK 115 Query: 115 GLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F Y GQ ++ I V+ L G +I VQ+GTT A + K Sbjct: 116 AVNFSDPYYKAGQIVVVKTENNDIKGVNDLKGKTIAVQSGTTG----AMEAEKATDKKKV 171 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I F ++ + +A D ++ + ++ DI+S A+ + Sbjct: 172 IYFTGADQALQELKNGAANAVIIDYPVAAYFIQQGNK--DVKLVGDIMSAEEYGIAVPKD 229 Query: 234 DTEWYNIVSWTHY 246 + V+ Sbjct: 230 KEQILADVNAGLK 242 >gi|295835696|ref|ZP_06822629.1| glutamate-binding protein [Streptomyces sp. SPB74] gi|295825636|gb|EDY45043.2| glutamate-binding protein [Streptomyces sp. SPB74] Length = 291 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 44/225 (19%), Positives = 81/225 (36%), Gaps = 10/225 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++ K RG L G E +G + GFD++ + +++ + ++I + Sbjct: 39 ASATWRKAKARGRLVVGAKEDQPYLGEKDPASGRYTGFDIEIAKMVAAGLGFPANRISFR 98 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + + R +LQ+ QID R+ +G F Y GQG + K GI Sbjct: 99 TIASANRETSLQNGQIDYYVGTYTINDNRKKLVG--FAGPYYLAGQGLLERKDEDGIKGP 156 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L G +C AG+T + + + ++ ++ DA T D S Sbjct: 157 ADLDGKRVCSAAGSTPYQRIQHDYPKA----DLVSYDTYSICVDNLLTYQVDAVTTDDSI 212 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L P E ++ S+ P + + D + Sbjct: 213 LLGYAAKV--PEELKVVGKPFSEEPYGIGVPREDNALRLAIDGIL 255 >gi|77457194|ref|YP_346699.1| lysine-arginine-ornithine-binding periplasmic protein [Pseudomonas fluorescens Pf0-1] gi|77381197|gb|ABA72710.1| L-ornithine-binding protein / L-arginine-binding protein [Pseudomonas fluorescens Pf0-1] Length = 258 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 90/260 (34%), Gaps = 21/260 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L L +L +S L+ GI FA G+ GFD Sbjct: 1 MKKFPLITGLALSLLACSSAFAAEKT---------LRIGIEAAYPPFASKTDKGEIVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + + K ++ +L+ K+ID+ + R+ + F Sbjct: 52 YDIGNALCAQM---QVKCVWVEGEFDGLIPSLKVKKIDMALSSMTINEDRKK--SVDFTH 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 YF +M + + L G ++ VQ TTT+ + F+ + + + Sbjct: 107 KYYFTSSRLVMKEGASVDDQYASLKGKTVGVQRATTTDRYATEVFEPKGI--NVKRYGNN 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI----ISKSPLAPAIIQGDT 235 EEI A R DA D L + P++ A+ +G+T Sbjct: 165 EEIYMDLAAGRLDAIFADTIPLTDFLSMPRGKGYAFVGPELKDPKYVGEGAGIAVRKGNT 224 Query: 236 EWYNIVSWTHYAMVTAEELG 255 E + ++ + + E Sbjct: 225 ELVSQLNTAIDGIRASGEYQ 244 >gi|313607306|gb|EFR83728.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL F2-208] Length = 486 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 106/279 (37%), Gaps = 24/279 (8%) Query: 1 MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I+ F+ + T L I+++G L G++ + Sbjct: 1 MQKHLLQKFAAILLVFIVVFSGFTTVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV + ++ + K++ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAKKIAKDL---NVKLEIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F F Q ++ K K +SV+ SG + Q TT E + Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ +A + A + + I SK Sbjct: 174 --VGSEVVSLQKVPDLILNLKSNKVEAVVLEGPVAEAYISQDKTLAMADIKFANGSKE-T 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 A A+ +G T V+ + + L QK N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQKEANKLM 269 >gi|311280249|ref|YP_003942480.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter cloacae SCF1] gi|308749444|gb|ADO49196.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter cloacae SCF1] Length = 243 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 80/252 (31%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + ++ + G++ F + A+ GFD Sbjct: 1 MKKVILAALLASFAVGASAAE-------------KINFGVSATYPPFESMDASNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + D + +L+ K+ D + D T R S ++F Sbjct: 48 IDLAKALCKQMQAD---CTFTNHAFDSLIPSLKFKKYDAVISGMDITPER--SKQVSFTD 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++ KK S L G I ++ GTT + L D + ++ + Sbjct: 103 PY-YANSALVIAKKGEFKSFDDLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P P + L A+ + Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGTATPKVTDPQYFGTGLGIAVRPDNQA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLAQLNNALKAI 227 >gi|228989528|ref|ZP_04149513.1| Amino acid ABC transporter, solute binding protein [Bacillus pseudomycoides DSM 12442] gi|228770253|gb|EEM18832.1| Amino acid ABC transporter, solute binding protein [Bacillus pseudomycoides DSM 12442] Length = 271 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 81/253 (32%), Gaps = 21/253 (8%) Query: 1 MYKDFFVSILCLII---LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + + + + S S + ++ F + +G Sbjct: 11 MRKKILTAFAAITLCVSFVLGACSKETSTNEG----KEFRYAMSGLYKPFNFKENDGKLV 66 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDV+ AL+ + P + + L++K+ D++ + T + + Sbjct: 67 GFDVEIGEALAKKMGMKPVPVT---NPWETLIQGLKAKKYDVILGSMAITE--DRLKAVN 121 Query: 118 FRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y G F+ K ISSV L G I V +T + + + Sbjct: 122 FTNPYYRSGAQIFVAKKNNSISSVEDLKGKKIGVVKASTFKKLVE------KHTDQITEY 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + R DA D + L++ + S ++ + AI + D E Sbjct: 176 DSDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLEEMGIAIRKDDKE 233 Query: 237 WYNIVSWTHYAMV 249 V+ ++ Sbjct: 234 MVKKVNKALEEII 246 >gi|324017956|gb|EGB87175.1| phage integrase, SAM-like domain protein [Escherichia coli MS 117-3] Length = 491 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 85/241 (35%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 239 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 298 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 299 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 353 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + + L G + V GT E ++ + + ++ Sbjct: 354 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 409 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 410 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 467 Query: 245 H 245 Sbjct: 468 I 468 >gi|229587811|ref|YP_002869930.1| cystine transporter subunit [Pseudomonas fluorescens SBW25] gi|229359677|emb|CAY46525.1| putative ABC transport system, exported protein [Pseudomonas fluorescens SBW25] Length = 264 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 44/225 (19%), Positives = 76/225 (33%), Gaps = 10/225 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + LG+IKK G +K G+ F+ V +G GF+V+ AL+ + ++ Sbjct: 27 AVAGEQLGNIKKAGEIKIGLEGTYPPFSFVDESGKLSGFEVELSEALAKELGVK---VKL 83 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 AL+SK++D + + R+ + + I + Sbjct: 84 QATPWDGILAALESKRLDAVVNQVTISEERKKKYDFSKPYTVSGIQALVLKKNVDTIKTA 143 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G + V GT E L D + K + R R DA D A Sbjct: 144 DDLAGKKVGVGLGTNYEQWLKD----NQPKAIIKTYNDDPTKFQDLRIGRIDAILIDRLA 199 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + D S+ A+ +G+ E V+ Sbjct: 200 ALEY---AKKAPDTAAAGDAFSRQEAGIALRKGEPELLAAVNQAL 241 >gi|91790186|ref|YP_551138.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91699411|gb|ABE46240.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 303 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 97/256 (37%), Gaps = 7/256 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + VS+ + L S++ A L ++ L G +G + F+ + G G+ Sbjct: 1 MSRR-IVSLAVALFLCAGSWTVEADTLDKVRVSKALHLGHRSGSIPFSYLGNTGQPIGYA 59 Query: 61 VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D C+ L++AI + +I ++P+ ER AL ID+ ++ T + Sbjct: 60 IDLCKHLAAAIAKEIRQPEMQIVWIPIGPNERNSALMDGLIDLDCGDSTVTAQ--SQKVI 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 AF Y G ++ K I+ + LSG + + E L + +V Sbjct: 118 AFSIPIYLAGTRLLVPKAASIAEIGTLSGMKVVTTTQSGNEAMLRHVLGQTGVTADVVVA 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + A D + L+ ++ ++ LP S P A A + D Sbjct: 178 RTAKAATEVLTTGQAQALFADDATLFGIRNLTKDQAQFTTLPKTYSLRPKALAYRKDDER 237 Query: 237 WYNIVSWTHYAMVTAE 252 +V+ ++ + Sbjct: 238 LRTLVTREIKTLIASG 253 >gi|307706858|ref|ZP_07643660.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] gi|307617731|gb|EFN96896.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] Length = 271 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L F + + + S + IK++G L + F V Sbjct: 4 KKWIFVLCSFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKISFLVRKSDVEKYKDLTSLESANIAAQKGTVPEAMVKEQLPKA----Q 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + + A A+ + Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNADLAVATVSLKMKDGEANAVALRK 234 Query: 233 GDTEWYNIVSWTHY 246 + +V Sbjct: 235 NSADLKEVVDKVIQ 248 >gi|302186816|ref|ZP_07263489.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. syringae 642] Length = 261 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 89/261 (34%), Gaps = 11/261 (4%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + +A+ L D+ RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + F Sbjct: 61 DIDTAQLLADRL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + ++ L G +I V G ++ L+ FE Sbjct: 116 RAYAPFYLAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSKVAPE---GAVIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A ++ P L + SP+ + +G E Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLG 230 Query: 240 IVSWTHYAMVTAEELGITQKN 260 V A L + Sbjct: 231 KVDEILNAAKADGTLEKASQT 251 >gi|307705070|ref|ZP_07641951.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus mitis SK597] gi|307621369|gb|EFO00425.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus mitis SK597] Length = 271 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L F + + + S + IK++G L + F V Sbjct: 4 KKWIFVLCSFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + + A A+ + Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNADLAVATVSLKMKDGEANAVALRK 234 Query: 233 GDTEWYNIVSWTHY 246 + +V Sbjct: 235 NSADLKEVVDKVIQ 248 >gi|296103000|ref|YP_003613146.1| allantoate transport periplasmic binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057459|gb|ADF62197.1| allantoate transport periplasmic binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 268 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 87/245 (35%), Gaps = 12/245 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + T+ S A L DI+KRG ++ + F V + +G+D Sbjct: 9 MKKLLI--ALAGAVCLLTNLSAKADQLQDIEKRGTIRIAVPQDFPPFGSVGTDLQPQGYD 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D R L+ + K+Q +P+ + R LQ+ ++D++ + RE + F Sbjct: 67 IDMARYLAKQM---KVKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKV--IDFSR 121 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G K + + LSG +I V G ++ L +E Sbjct: 122 AYAPFFLGVFGPKGAELKDAAALSGKTIGVTRGAVEDMVLTSLAPK---DADVKRYEDNN 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +AY + + + A+ + + + ++ SP + + + Sbjct: 179 TTLSAYLSGQVQYVATGNLVVAAI--SRQNAEKAPVPSFMLKDSPCFIGLKKNEPALKAK 236 Query: 241 VSWTH 245 V Sbjct: 237 VDALI 241 >gi|4154051|emb|CAA22704.1| putative glutamine-binding protein [Mycobacterium leprae] Length = 325 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 52/230 (22%), Positives = 95/230 (41%), Gaps = 10/230 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75 F + + + + +I+ RG L G+ G F+ G+ GFD+D ++ IF P Sbjct: 72 FPTKAEADAAVAEIRARGRLIVGLEIGSNLFSFRDPITGEITGFDIDIAGEVARDIFGTP 131 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 S ++Y L+ R ALQ ++DI+ + T R + F + Q + + Sbjct: 132 SHMEYRILSTAARITALQKSEVDIIVKTMTITCKRRKL--VNFSTVYLDAKQRILAPRDS 189 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ S LS +C+ GTT+ +++ + E + A + DA + Sbjct: 190 PITKPSDLSNKRVCMTRGTTSLHQVSEVVP----PPIIVSAENWADCLVAMQQREIDAIS 245 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D + L L + P H++ P+ ++ P I +T V+ T Sbjct: 246 TDDAILAGL--VEEDPYLHIVGPN-MATQPYGIGINLNNTTLVRFVNGTL 292 >gi|15827074|ref|NP_301337.1| putative glutamine-binding protein [Mycobacterium leprae TN] gi|221229552|ref|YP_002502968.1| putative glutamine-binding protein [Mycobacterium leprae Br4923] gi|13092622|emb|CAC29811.1| putative glutamine-binding protein [Mycobacterium leprae] gi|219932659|emb|CAR70396.1| putative glutamine-binding protein [Mycobacterium leprae Br4923] Length = 326 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 52/230 (22%), Positives = 95/230 (41%), Gaps = 10/230 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75 F + + + + +I+ RG L G+ G F+ G+ GFD+D ++ IF P Sbjct: 73 FPTKAEADAAVAEIRARGRLIVGLEIGSNLFSFRDPITGEITGFDIDIAGEVARDIFGTP 132 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 S ++Y L+ R ALQ ++DI+ + T R + F + Q + + Sbjct: 133 SHMEYRILSTAARITALQKSEVDIIVKTMTITCKRRKL--VNFSTVYLDAKQRILAPRDS 190 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ S LS +C+ GTT+ +++ + E + A + DA + Sbjct: 191 PITKPSDLSNKRVCMTRGTTSLHQVSEVVP----PPIIVSAENWADCLVAMQQREIDAIS 246 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D + L L + P H++ P+ ++ P I +T V+ T Sbjct: 247 TDDAILAGL--VEEDPYLHIVGPN-MATQPYGIGINLNNTTLVRFVNGTL 293 >gi|328957172|ref|YP_004374558.1| extracellular solute-binding protein [Carnobacterium sp. 17-4] gi|328673496|gb|AEB29542.1| extracellular solute-binding protein [Carnobacterium sp. 17-4] Length = 262 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 83/246 (33%), Gaps = 15/246 (6%) Query: 12 LIILFFTSFSTNASILGDIKK------RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + L + A + + L G++ V + G+ G DVD Sbjct: 7 MFSLLLVACGNTADTKTEEAEVFLGEPGDTLVVGLDDTFVPMGFRDSEGNLVGLDVDLAT 66 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + I++ P++ + L S ID++ T R+ + F Sbjct: 67 EVAKRL---DLNIEFQPIDWAMKETELTSGNIDVIWNGYSITEERKE--KVDFSIPYTDG 121 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEI 182 GQ F++ I + L ++ Q ++T LA + I + ++ Sbjct: 122 GQIFVVLADSPIKTWDDLKEKTVAAQQSSSTVDLLASHESGIMDTFANGEIIQYPSYNDV 181 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + R +A + ++ IL + ++ A + + DTE+ ++ Sbjct: 182 FNDLDSKRSEAIAVSE-IYARYTMKQKGLGKYRILDESFAEEETAVGVRKTDTEFLEKLN 240 Query: 243 WTHYAM 248 T M Sbjct: 241 TTLTDM 246 >gi|289167584|ref|YP_003445853.1| ABC transporter substrate-binding lipoprotein [Streptococcus mitis B6] gi|288907151|emb|CBJ21985.1| ABC transporter substrate-binding lipoprotein [Streptococcus mitis B6] Length = 271 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L F + + + S + IK++G L + F V Sbjct: 4 KKWIFVLCSFLATFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + + A A+ + Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNADLAVATVSLKMKDGEANAVALRK 234 Query: 233 GDTEWYNIVSWTHY 246 + +V Sbjct: 235 NSADLKEVVDKVIQ 248 >gi|55820919|ref|YP_139361.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus thermophilus LMG 18311] gi|55822839|ref|YP_141280.1| amino acid (glutamine) ABC transporter substrate binding protein [Streptococcus thermophilus CNRZ1066] gi|55736904|gb|AAV60546.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus thermophilus LMG 18311] gi|55738824|gb|AAV62465.1| amino acid (glutamine) ABC transporter, substrate binding protein [Streptococcus thermophilus CNRZ1066] Length = 283 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 83/256 (32%), Gaps = 18/256 (7%) Query: 1 MYKD----FFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEV 50 M K ++ L + ++ +T K +K G + V Sbjct: 1 MKKIVKTVLLACLVILPLFTLSACSSRSHFATQKDQWQTYTKEKKIKIGFDATFVPMGYE 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + +G + GFD+D A+ D +++ ++ + L++ ID++ T R Sbjct: 61 EKDGSYIGFDIDLANAVFKLYGID---VEWQAIDWDMKETELKNGTIDLIWNGYSVTDER 117 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM- 169 + F + Q + K GI SV+ ++G ++ QAG++ K Sbjct: 118 K--QSADFTEPYMVNEQVLVTKKSSGIDSVAGMAGKTLGAQAGSSGYDAFNASPKILKDV 175 Query: 170 --KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + + + R D D + ++ ++P A Sbjct: 176 VANQKVVQYSTFTQALIDLNSGRIDGLLIDRVYANYYLEKSGVLDQYNVMPAGYEGESFA 235 Query: 228 PAIIQGDTEWYNIVSW 243 + D ++ Sbjct: 236 VGARKVDKTLIKKINQ 251 >gi|307701932|ref|ZP_07638941.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus mitis NCTC 12261] gi|307616747|gb|EFN95935.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus mitis NCTC 12261] Length = 271 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L F + + + S + IK++G L + F V Sbjct: 4 KKWIFVLCSFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKISFLVRKSDVEKYKDLTSLESANIAAQKGTVPEAMVKEQLPKA----Q 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + + A A+ + Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNADLAVATVSLKMKDGEANAVALRK 234 Query: 233 GDTEWYNIVSWTHY 246 + +V Sbjct: 235 NSADLKEVVDKVIQ 248 >gi|58337338|ref|YP_193923.1| glutamine ABC transporter substrate-binding protein [Lactobacillus acidophilus NCFM] gi|58254655|gb|AAV42892.1| glutamine ABC transporter substrate-binding protein [Lactobacillus acidophilus NCFM] Length = 286 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 67/300 (22%), Positives = 117/300 (39%), Gaps = 43/300 (14%) Query: 1 MY-KDFF---VSILCLIILFFTS----------FSTNASILG------DIKKRGFLKCGI 40 M K+ F +SIL ++++ ++ T+AS +IK+RG+L+ + Sbjct: 1 MKVKNIFNWTISILAILLVIISAYFGFAQKGLNSGTSASRWSNQNGVSEIKRRGYLRVAV 60 Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 L + V +NG G+DV ++ + I+++ +NA R L S + DI+ Sbjct: 61 FGDLPPYGWVNSNGKRVGYDVYLAHRMTQDLGVK---IRFVQVNANNRVDTLNSNKADII 117 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 N T R+ + F G I K I+S +QL + V GTT E Sbjct: 118 LANFTVTPERK--DVVDFAKPYMKVSVGVISPKSAPITSANQLKNKKLIVTKGTTAENYF 175 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 + + + F+ + A + R A D S LYA P V + I Sbjct: 176 SQ-----QKNVNLLKFDSKTQQFNALKNGRGAALADDNSYLYAW--VKQNPKYTVGIKSI 228 Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280 K ++PA+ +G+ + IT+ N + N +++ + G D Sbjct: 229 GPKQYISPAVKKGNRSLLKWTNK-----------EITKLNKESFFVEDYNKELRPYFGKD 277 >gi|62317515|ref|YP_223368.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella abortus bv. 1 str. 9-941] gi|83269498|ref|YP_418789.1| glutamate-binding protein [Brucella melitensis biovar Abortus 2308] gi|189022771|ref|YP_001932512.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus S19] gi|254691014|ref|ZP_05154268.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus bv. 6 str. 870] gi|254695679|ref|ZP_05157507.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus bv. 3 str. Tulya] gi|254698799|ref|ZP_05160627.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus bv. 2 str. 86/8/59] gi|254705877|ref|ZP_05167705.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella pinnipedialis M163/99/10] gi|254711105|ref|ZP_05172916.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella pinnipedialis B2/94] gi|254720387|ref|ZP_05182198.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. 83/13] gi|254732244|ref|ZP_05190822.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus bv. 4 str. 292] gi|256015408|ref|YP_003105417.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella microti CCM 4915] gi|256029486|ref|ZP_05443100.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella pinnipedialis M292/94/1] gi|256059175|ref|ZP_05449384.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella neotomae 5K33] gi|256157681|ref|ZP_05455599.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella ceti M490/95/1] gi|256253346|ref|ZP_05458882.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella ceti B1/94] gi|256256200|ref|ZP_05461736.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus bv. 9 str. C68] gi|260167422|ref|ZP_05754233.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. F5/99] gi|297249558|ref|ZP_06933259.1| polar amino acid transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] gi|306837482|ref|ZP_07470358.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. NF 2653] gi|306840711|ref|ZP_07473460.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. BO2] gi|62197708|gb|AAX76007.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus bv. 1 str. 9-941] gi|82939772|emb|CAJ12777.1| Solute-binding protein/glutamate receptor:Ionotropic glutamate receptor:Bacterial extracellular solute-binding protein, family 3 [Brucella melitensis biovar Abortus 2308] gi|189021345|gb|ACD74066.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus S19] gi|255998068|gb|ACU49755.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella microti CCM 4915] gi|297173427|gb|EFH32791.1| polar amino acid transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] gi|306289284|gb|EFM60528.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. BO2] gi|306407525|gb|EFM63728.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. NF 2653] Length = 257 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 85/248 (34%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L ++L + + + K+ ++ F + +G GFD Sbjct: 1 MLKSLVLAGLASVVLTVSVQAPVQA-----KEWKEIRIASEGAYPPFNYMSPDGKLVGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL A+ +K + + LQ+ + D + + T R+ + F Sbjct: 56 LDIANALCEAM---EAKCTIVANDWDGMIPGLQANKFDAVIASMAITDERKKQVA--FTD 110 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y ++ K I S S +G + QAGTT D + ++ Sbjct: 111 RYYTTPLAVVVPKDSDIVSLEPSAFAGKMVGAQAGTTQGNYADDVYGKAGAD--VKLYPT 168 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E +A + R DA D + S++ +A A+ QGD + Sbjct: 169 ADEANADLESGRLDALAADKFIAADWLKKQGADCCKFLGDIPGSETQIAVALRQGDDDLR 228 Query: 239 NIVSWTHY 246 + Sbjct: 229 EQFNAAIK 236 >gi|325272611|ref|ZP_08138970.1| Lysine-arginine-ornithine ABC transporter, periplasmic ligand binding protein [Pseudomonas sp. TJI-51] gi|324102253|gb|EGB99740.1| Lysine-arginine-ornithine ABC transporter, periplasmic ligand binding protein [Pseudomonas sp. TJI-51] Length = 256 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 79/251 (31%), Gaps = 24/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L + K ++ G++ F +G GFD Sbjct: 1 MKKFVLATVFALASTGVLA-----------KDLSVIRFGVDPTFAPFESKNPDGQLVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + + K ++ AL++K+ D + R+ + F Sbjct: 50 IDLGNAICAEL---KVKCVWVENAFDSIIPALRAKKFDAVLSAMTINDQRKK--NVDFSD 104 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K G + + L G + V GTT E + + + + + Sbjct: 105 RLYNSPNRLIAKKDSGLLPTPESLKGKRVGVAQGTTQETYVKKIWAPKGVIM--VTYPNQ 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 + + + R DA D + L + + D + +A + + + Sbjct: 163 DLLYPDLVSGRIDASLTDAAVAELGFLQTPKNTGFAFAGDAVYNQELLGEGIAIGLRKNE 222 Query: 235 TEWYNIVSWTH 245 + ++ Sbjct: 223 PQLMEAINRAL 233 >gi|259502847|ref|ZP_05745749.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus antri DSM 16041] gi|259169214|gb|EEW53709.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus antri DSM 16041] Length = 282 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 79/234 (33%), Gaps = 9/234 (3%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 T+ + I++R + G++ V + +G G+DVD RA+ Sbjct: 25 SVTTRANTQDTWSRIERRKKVVIGLDDSFVPMGFREKSGKLVGYDVDLARAVFKQYG--- 81 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K+ + ++ + L++ ID+L R+ +AF + Q + K Sbjct: 82 IKVDFQTIDWSMKETELKNGTIDLLWNGYSMNPSRKK--KVAFSRPYLENRQVLVTKKSS 139 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH---PIVFERVEEIDAAYRAHRCD 192 I ++ ++G S+ VQ G+T L K K ++++ + A+R Sbjct: 140 HIDGLNGMAGKSLGVQNGSTGAAVLDAKPKLLKDKIKNKSAVLYDTFPDAFIDLNANRIQ 199 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIVSWTH 245 D + + + + +GD ++ Sbjct: 200 GILMDQVYADYYVDHQKDKNAYKVYESKQLPVEYFGVGMRKGDKTLQKKINQGL 253 >gi|320008163|gb|ADW03013.1| extracellular solute-binding protein family 3 [Streptomyces flavogriseus ATCC 33331] Length = 280 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 73/235 (31%), Gaps = 12/235 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G + GI G +G + GFDVD ++ + D I+++ + +R A++ Sbjct: 38 GKITIGIKIDQPGLGLKTPDGKFAGFDVDIATYVAKELGYDAKNIEFVETKSADRETAIE 97 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152 + ++ R + F Q ++ I S L+ ++C Sbjct: 98 RGDVKFIAATYSINDER--LQKVDFAGPYLLAHQDVLVRADDNSIKSPEDLNSKNLCSVT 155 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T+ + D K + E DA T D S L + Sbjct: 156 GSTSAKNVKDKLA---PKAQLQNYGGYSECLTGLENKAVDALTTDDSILAGYAAQDAHKG 212 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY------AMVTAEELGITQKNI 261 + + ++ + +GD + + + A E N Sbjct: 213 KFKLAGFKMTNENYGIGLKKGDADLKKKIDAALTKMVSDGSWDKAVEANFGPANY 267 >gi|264680798|ref|YP_003280708.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni CNB-2] gi|262211314|gb|ACY35412.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni CNB-2] Length = 320 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 97/275 (35%), Gaps = 24/275 (8%) Query: 1 MYKDFFVSILCLIILFFTSFS--------------------TNASILGDIKKRGFLKCGI 40 M + L+ + + + L + G + G+ Sbjct: 3 MSLKWVGLAAALVCAGSAVAAGKTEVASSNIGSGIDTVVDLSASPTLQRWQAGGTVVLGV 62 Query: 41 NTGLVGFAE-VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 V + + AN + G+ +D C + AI ++++Y+ L + + + D Sbjct: 63 REAAVPMSYAIGANEKFVGYHMDLCERVVHAI-APRAQLKYMVLTPQNTMPLINNGTADF 121 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159 + L R+ + F TY + GI+S QL G ++ GTT Sbjct: 122 NCASMTNNLTRQKQVA--FGLTTYVSEVRMAVRADSGITSFRQLQGRNVGAITGTTAVQI 179 Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 L Y + + + ++ + E + R DA+ D + L + + P + I+ + Sbjct: 180 LRKYASDNELNFKTLMSKDQFESFLMLESGRVDAFVLDDNMLAGVIGQSKNPKGYKIVGE 239 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 +I P+A + D + V M+ + EL Sbjct: 240 VIGAEPIAIQFSKNDPQIKKAVDGAILQMIRSGEL 274 >gi|256827733|ref|YP_003151692.1| amino acid-binding protein [Cryptobacterium curtum DSM 15641] gi|256583876|gb|ACU95010.1| amino acid-binding protein [Cryptobacterium curtum DSM 15641] Length = 291 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 94/298 (31%), Gaps = 35/298 (11%) Query: 1 MYKD---FFVSILCLIILFFTSFS-------------TNASILGDIKKRGFLKCGINTGL 44 M K FV+ C++ + + + +S DIK L G + Sbjct: 5 MKKKGLFAFVASACMVCVLAFALAGCSGGQNSTQNGDAQSSNSADIK---TLTVGFDPAY 61 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 + V +G + GFD+D + + + + P++ + L I+ + Sbjct: 62 PPYGFVGDDGQYTGFDLDLAKEVCNRNGWEFKA---EPIDWDAKDALLGQGAINCIWNGF 118 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 RE F + Q ++ IS +S LSG ++ Q + L Sbjct: 119 TM-EGREG--QYTFSDPYMLNEQVVVVKSGSNISQLSDLSGKTVMTQVDSAALDVLETPA 175 Query: 165 KAHNM--------KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 P + A DA D+S A PS+++ Sbjct: 176 AEDGQADLAATFTGGAPQTIGNYNDAFLQLDAGTVDAVACDLSI--AQYQIAANPSKYMQ 233 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 L + +S A G++E V+ T M + + Q N +++ Sbjct: 234 LSEALSTENYAVGFKLGNSELAQKVTATLKEMAADGTVKQLCEKYAQYGLSYDNWELK 291 >gi|13324646|gb|AAK18828.1|AF327739_5 Peb1 [Streptococcus thermophilus] Length = 277 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 60/285 (21%), Positives = 111/285 (38%), Gaps = 27/285 (9%) Query: 2 YKDFF-----VSILCLIILFFTSFSTNA---------SILGDIKKRGFLKCGINTGLVGF 47 +K VS++ + T+ T A + I RG L G+ + F Sbjct: 3 FKKILRYLTAVSLVIATVFLITNHKTEAEDTSKLLDSKTVQKIVNRGTLNVGVKQDVPNF 62 Query: 48 AEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 A ++G +VD + ++ + K+ Y+P+ + R + + ID+L Sbjct: 63 GYYSAKTNRYEGMEVDLAKKIADEL---RVKVNYIPVTTQTREPLMDNGTIDLLIGTYTI 119 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ S + Y D GF++ K GI+ +S L+G +I V G +T+ L +Y A Sbjct: 120 NDERKASYAI--SNPYYRDQIGFLVLKDSGINKISDLNGKTIGVAQGASTKAALQEYSSA 177 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 HN+K++ + E+ + AHR DA++ D S L + + IL + Sbjct: 178 HNLKFNYVQLGSYPELAVSLYAHRVDAFSVDKSILSGYESKKTK-----ILNEGFKTQDY 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG--ITQKNINQVSKDTT 269 A + + E + + L + N+ + Sbjct: 233 GIASSKSNQELIDYTNDLIAKWQKDGSLQKLYDKYNLKPAKAENK 277 >gi|15900055|ref|NP_344659.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae TIGR4] gi|111657059|ref|ZP_01407854.1| hypothetical protein SpneT_02001712 [Streptococcus pneumoniae TIGR4] gi|14971580|gb|AAK74299.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Streptococcus pneumoniae TIGR4] Length = 268 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 85/261 (32%), Gaps = 15/261 (5%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 4 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R Sbjct: 64 VGSDIELAKAIATKLGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 119 DFSIPYYTAKNKLIVKKSDLTTYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVSKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + V T + + EL Sbjct: 235 KKLKEAVDKTIQKLKESGELD 255 >gi|313668015|ref|YP_004048299.1| histidine-binding periplasmic protein [Neisseria lactamica ST-640] gi|313005477|emb|CBN86912.1| histidine-binding periplasmic protein [Neisseria lactamica 020-06] Length = 268 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 87/258 (33%), Gaps = 11/258 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWKGF 59 M K ++ C ++ + + N F + + G+ +GF Sbjct: 3 MKKWIAAALACSVLALSACGGQGKDAAAPAANPDKVYRVASNAEFAPFESLDSKGNVEGF 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A++ A KI++ F AL + D++ T + + F Sbjct: 63 DVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGDADVVMSGVTITD--DRKQSMDFS 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q ++ K K +SS L + V G T + +++ N FE Sbjct: 118 DPYFEITQVVLVPKGKKVSSSEDLKKMNKVGVVTGYTGDFSVSKLLG--NDNPKIARFEN 175 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEW 237 V I D+ D + + N + + V LPD + A+ +GD Sbjct: 176 VPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDFVTLPD-FTTEHYGIAVRKGDEAT 234 Query: 238 YNIVSWTHYAMVTAEELG 255 +++ + + E Sbjct: 235 VKMLNDALKKVRESGEYD 252 >gi|55821471|ref|YP_139913.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus thermophilus LMG 18311] gi|55737456|gb|AAV61098.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus thermophilus LMG 18311] Length = 278 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 83/254 (32%), Gaps = 18/254 (7%) Query: 1 MY--KDFFVSILCLIIL-FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANG 54 M K + + + L + S++ + L +K +G L +N F Sbjct: 3 MKPWKKLLLGLAGIFALTSLAACSSSTNTLDKVKNKGTLTVALNPHFAPFEFKTIQDGKD 62 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D++ + + + +++ ++ ++QS + DI T R+ Sbjct: 63 TIAGADIEIAKVIGDELGVK---VKFSEMSFDNVLASVQSGKADIAISGISATKERQKI- 118 Query: 115 GLAFRPITYFDGQGFIMHKK---KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F Y ++ K K +S S SI VQ G+ E KA+ Sbjct: 119 -FDFSDTYYDSETVLLVKKDATEKTYKQISDFSKKSIAVQKGSIQENI----AKANLSDA 173 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + + E ++ + + + + N + I S A A+ Sbjct: 174 NVVSLAQPGEAINELKSGQVEGVVLEKAIAKGYVDQNSDLTMSDIALKSDSNDAYAVAMP 233 Query: 232 QGDTEWYNIVSWTH 245 +G + V+ Sbjct: 234 KGSDDLKAKVNKII 247 >gi|167758444|ref|ZP_02430571.1| hypothetical protein CLOSCI_00784 [Clostridium scindens ATCC 35704] gi|167664341|gb|EDS08471.1| hypothetical protein CLOSCI_00784 [Clostridium scindens ATCC 35704] Length = 283 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 74/217 (34%), Gaps = 7/217 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G + + +G++ GFD++ + + +D ++ P++ + + + S Sbjct: 48 TLIVGFDASFPPYGYKDDDGEYVGFDLELAQEVCDR--NDWKLVK-QPIDWDAKDMEIDS 104 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 ID + + + + Q ++ GI+S LSG + QA + Sbjct: 105 GTIDCIWNGFTMNGREDE---YTWSDPYIDNKQVIVVATDSGINSFDDLSGKLVETQADS 161 Query: 155 TTELTLA-DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 + L D + + CDA DI Y + P + Sbjct: 162 SALAALQGDQKELAGTFGSLTEIAEYNTAFMDLESGACDAIAMDIGVAYYQINSRKNPDD 221 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + +L + IS A G+ E + V T M Sbjct: 222 YKVLDEEISSEQYAVGFKLGNEELRDKVQATLDEMAE 258 >gi|229113500|ref|ZP_04242949.1| Amino acid ABC transporter, amino acid-binding protein [Bacillus cereus Rock1-15] gi|229164679|ref|ZP_04292543.1| Amino acid ABC transporter, amino acid-binding protein [Bacillus cereus R309803] gi|228618759|gb|EEK75721.1| Amino acid ABC transporter, amino acid-binding protein [Bacillus cereus R309803] gi|228669918|gb|EEL25312.1| Amino acid ABC transporter, amino acid-binding protein [Bacillus cereus Rock1-15] Length = 262 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 75/218 (34%), Gaps = 8/218 (3%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ L GI+ + GFD+D+ +A + + +K+++ P++ K + Sbjct: 32 KEDNTLVIGIDDKFAPMGFRDESNKIVGFDIDYAKAAAEKMG---TKVKFQPIDWKTKES 88 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 L S +ID++ T + + F + Q + I+ ++ L G + + Sbjct: 89 ELSSGRIDLIWNGYTITD--DRKNKVLFTKPYLKNAQVVVTLADSPITKLNNLEGKVVGL 146 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q+ ++ L +K F ++ R DA D + Sbjct: 147 QSLSSASDALNSNPIKSKIK-TVTEFADNVSALNDLKSGRLDAVIIDEVVINYYMTKEKD 205 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 IL + +S + +G+ + M Sbjct: 206 --TFKILDEFLSPEEYGIGVKKGNDALLKKLQKALDEM 241 >gi|44004546|ref|NP_982215.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus ATCC 10987] gi|190015020|ref|YP_001966755.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus] gi|190015286|ref|YP_001967079.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus] gi|218848398|ref|YP_002455141.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH820] gi|296506619|ref|YP_003667853.1| amino acid ABC transporter amino acid-binding protein [Bacillus thuringiensis BMB171] gi|42741612|gb|AAS45057.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus ATCC 10987] gi|116584696|gb|ABK00811.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus] gi|116584967|gb|ABK01076.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus] gi|218540449|gb|ACK92845.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH820] gi|296327206|gb|ADH10133.1| Amino acid ABC transporter, amino acid-binding protein [Bacillus thuringiensis BMB171] Length = 257 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 75/218 (34%), Gaps = 8/218 (3%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ L GI+ + GFD+D+ +A + + +K+++ P++ K + Sbjct: 27 KEDNTLVIGIDDKFAPMGFRDESNKIVGFDIDYAKAAAEKMG---TKVKFQPIDWKTKES 83 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 L S +ID++ T + + F + Q + I+ ++ L G + + Sbjct: 84 ELSSGRIDLIWNGYTITD--DRKNKVLFTKPYLKNAQVVVTLADSPITKLNNLEGKVVGL 141 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q+ ++ L +K F ++ R DA D + Sbjct: 142 QSLSSASDALNSNPIKSKIK-TVTEFADNVSALNDLKSGRLDAVIIDEVVINYYMTKEKD 200 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 IL + +S + +G+ + M Sbjct: 201 --TFKILDEFLSPEEYGIGVKKGNDALLKKLQKALDEM 236 >gi|15896568|ref|NP_349917.1| periplasmic amino acid binding protein [Clostridium acetobutylicum ATCC 824] gi|15026405|gb|AAK81257.1|AE007829_10 Periplasmic amino acid binding protein [Clostridium acetobutylicum ATCC 824] gi|325510729|gb|ADZ22365.1| Periplasmic amino acid binding protein [Clostridium acetobutylicum EA 2018] Length = 269 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 81/260 (31%), Gaps = 23/260 (8%) Query: 1 MYKD--FFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEV 50 M + F ++L L ++ + + + + L IK G L+ G F Sbjct: 1 MKRKGIFASAVLALTLVIGITGCSSSSSQKTASQNSLEKIKSEGKLRIGTEGTYAPFTFH 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + G+ GFDVD + +S I P ++ F L + + D++ Sbjct: 61 DSKGNLTGFDVDIAKEVSKRIGVKPE---FVETKWDGMFAGLDAGRFDVVLNEVAI--KP 115 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + + F I+ K I S S L G Q+ T+ + A N Sbjct: 116 DRKVKYDFSTPYITSRAVLIVKKDNNTIKSFSDLKGKKSA-QSLTSNLGNI-----AKNN 169 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 I + E ++R DA D + LK + + A Sbjct: 170 GAELIQVDGFNEAVDLLTSNRVDATINDSLSYLDLKKQKPDAPIKSVANYNNASESAAMF 229 Query: 230 IIQGDT-EWYNIVSWTHYAM 248 + E V+ M Sbjct: 230 KKGSNNKELIAAVNKALKDM 249 >gi|170743518|ref|YP_001772173.1| extracellular solute-binding protein [Methylobacterium sp. 4-46] gi|168197792|gb|ACA19739.1| extracellular solute-binding protein family 3 [Methylobacterium sp. 4-46] Length = 305 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 56/239 (23%), Positives = 92/239 (38%), Gaps = 10/239 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKA---NGDWKGFDVDFCRAL----SSAIFDDPSK 77 L G + G T + F+ V+ G G+ +D C+ + AI D + Sbjct: 33 GTLRKAATSGVVAIGYRTSSIPFSFVEEGRGEGRPVGYAIDLCQEIVDEIGRAIGRDDLR 92 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I+++P+ ++ R AL S +ID+ +T R +AF P+T+ ++ + I Sbjct: 93 IRFVPVTSESRIPALLSGEIDLECGSTTANAERRR--SVAFSPVTFVSATTLLVPRGSAI 150 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +S L+G + V AGTT E L + + E A R R DA+ D Sbjct: 151 ASYRDLAGKRVVVTAGTTNETALRALLARLRLDAQVLTGRDHAESFALLREGRADAFALD 210 Query: 198 ISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L L + +LPD +S P + D +V + EL Sbjct: 211 DVLLSGLIAAAGEAGRGFTVLPDKLSFEPYGIMFRKDDPALAGVVDAAFARLAGTRELR 269 >gi|307316501|ref|ZP_07595944.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] gi|306897699|gb|EFN28442.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] Length = 268 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 44/238 (18%), Positives = 82/238 (34%), Gaps = 17/238 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M L+ + +A L DI G L+C + N + GFD Sbjct: 1 MKTSVL--AFGLVAATALTSPAHADKLDDIIASGTLRCAVVLDFPPMGSRDENNEPIGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C L+ A+ ++ ER AL S ++D+ +T TL R ++G+ Sbjct: 59 VDYCNDLARALGVTAEIVE---TPFPERIPALMSGRVDVGVASTSDTLERAKTVGM--TV 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++K GI S + G + AGT + L + KA ++ Sbjct: 114 PYFAFEMAVTANEKSGIKSFEDMKGKVVGATAGTYEAIALENQVKAWGEG-EFRPYQTQA 172 Query: 181 EIDAAYRAHRCDAYTGDISA---------LYALKLTNDRPSEHVILPDIISKSPLAPA 229 ++ A + DA + + + + P + + ++ Sbjct: 173 DVFLALSQGQLDATVSTSTVAQSNVKGGKFPGISVVDKAPFDIDYVALFTNREEYGFL 230 >gi|218440217|ref|YP_002378546.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] gi|218172945|gb|ACK71678.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] Length = 295 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 98/249 (39%), Gaps = 11/249 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L S ++L + + G L G T +V A V + G+ Sbjct: 1 MKKLTLALLSLAFTLALPLKSGAETVLERVARTGVLTVGTPTDIVPLAYVNEQQELVGYS 60 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 VDF L I +Q++ + + L S+++DI+ N ++ R+ + Sbjct: 61 VDFLNLLKDQIQTQLGREIALQFVEITPSDGIPKLMSEEVDIIC-NAGFSWERDKF--VD 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F G ++ + + S+ L G + T E + + + E Sbjct: 118 FSLSMGISGTQILVKQNTNLGSIDSLKGKRVAAIPKTIAEQVI----RVSQPDATVVTVE 173 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTE 236 +++ A + DA+ D L + T +P+ + ++P+ ++ +A + + +++ Sbjct: 174 SMQQGFEAVEQGKVDAFAADGIILEGYQQTVSQPNAYKVVPEQPYNRQGIACMVPENNSK 233 Query: 237 WYNIVSWTH 245 + + +++T Sbjct: 234 FLDTINFTI 242 >gi|260893884|ref|YP_003239981.1| extracellular solute-binding protein family 3 [Ammonifex degensii KC4] gi|260866025|gb|ACX53131.1| extracellular solute-binding protein family 3 [Ammonifex degensii KC4] Length = 271 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 90/328 (27%), Gaps = 68/328 (20%) Query: 1 MYK---DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDW 56 M + + ++ + +F + ++S ++ F G Sbjct: 1 MKRFWSRLCIGLVLVTAIFLSGCGASSSKTTAESQKPKYVVATEASFAPFEFRDDKTGQI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D +AL++ D +++ + A+++ +D+ R+ + Sbjct: 61 TGFDIDLMKALAAIQGFD---VEFKDMGFDGIIAAVKTGSVDMAISAISIDEERKK--QV 115 Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y G + + I ++ L G I Q GTT F I Sbjct: 116 NFSLPYYQSGLCVAVRADNQNIKTLKDLEGKKIAAQLGTTGAK-----FAKTIPGAKVIE 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F + DA+ D + P V+ I+ A+ + Sbjct: 171 FNTANDAFMELINGGVDAFINDYPVTA-YFIKQGHPEVKVVKDIHINSEFYGIAVPKNRP 229 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295 E ++ GL K Sbjct: 230 ELLQKINE----------------------------------------------GLKK-- 241 Query: 296 TYRIIRHMGNYGEMFDRNLGNQSELKIP 323 ++ G Y E++ R G +P Sbjct: 242 ----LKENGQYAEIYRRWFGENPPDFLP 265 >gi|323339492|ref|ZP_08079771.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ruminis ATCC 25644] gi|323093106|gb|EFZ35699.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ruminis ATCC 25644] Length = 270 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 82/254 (32%), Gaps = 14/254 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-------SILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K + I L +N+ IK G + G++ V + N Sbjct: 1 MKKKSRIGICLFFALCLLGGCSNSKLRAEKVDNWARIKHHGMVVVGLDDSFVPMDFRQKN 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G G+DVD +A+ P + ++ + L + ID++ T R Sbjct: 61 GRLVGYDVDLAQAVFKKCGLKPD---FQTIDWSMKETELMNGTIDVIWNGYSKTSER--M 115 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL-TLADYFKAHNMKYH 172 +AF + Q + K+K + + + + +I VQ+G++ + Sbjct: 116 KKVAFSNSYLANDQVLVT-KEKNVKNGADMKDKTIGVQSGSSGYDCYVGYPDMLKKYARK 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I ++ + A R D + P + + K A I + Sbjct: 175 TIQYDTFNDAFLDLDAKRISGIVIDEVYASYVISHKSDPLSYHEVSIGYPKEEFAVGIRK 234 Query: 233 GDTEWYNIVSWTHY 246 GD + ++ Sbjct: 235 GDKKLRLKINRALK 248 >gi|162448162|ref|YP_001621294.1| ABC transporter substrate-binding protein [Acholeplasma laidlawii PG-8A] gi|161986269|gb|ABX81918.1| ABC-type transport system, substrate-binding component [Acholeplasma laidlawii PG-8A] Length = 262 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 91/251 (36%), Gaps = 9/251 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F + + L + T+ + N I+++G G T + NG GF Sbjct: 1 MKKLFLLLSIMLTTIVLTACNANNLTDYEYIEQKGSFTLGY-TDFPPMGYLD-NGTPSGF 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D++ + + + +++ ++ + + L SK+ID + T R L + F Sbjct: 59 DIEIATLVFERLGIE---LKFKYIDWDAKVVELDSKRIDAIWNGLTITDER--KLEMTFS 113 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + I + I ++S LS +I ++ G++ +L++ ++ + Sbjct: 114 KPYFDNNLIIISKEGSNIDTISDLSDKNIGLELGSSADLSVGKNENILSISKEVKKYSTS 173 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A A DA D + D + + I +II GD Sbjct: 174 SDAILALNAGLVDAVIVDE-IYARYVVLKDTTNAYTISSEIIGTEQYGIGFRLGDETLKT 232 Query: 240 IVSWTHYAMVT 250 + A+ Sbjct: 233 KIDEALDALFE 243 >gi|23500376|ref|NP_699816.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella suis 1330] gi|161620691|ref|YP_001594577.1| extracellular solute-binding protein [Brucella canis ATCC 23365] gi|23463994|gb|AAN33821.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella suis 1330] gi|161337502|gb|ABX63806.1| extracellular solute-binding protein family 3 [Brucella canis ATCC 23365] Length = 257 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 86/248 (34%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L ++L + + + K+ ++ F + +G GFD Sbjct: 1 MLKSLVLAGLASVVLTVSIQAPVQA-----KEWKEIRIASEGAYPPFNYMSPDGKLVGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL A+ +K + + +LQ+ + D + + T R+ + F Sbjct: 56 LDIANALCEAM---EAKCTIVANDWDGMIPSLQANKFDAVIASMAITDERKKQVA--FTD 110 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y ++ K I S S +G + QAGTT D + ++ Sbjct: 111 RYYTTPLAVVVPKDSDIVSLEPSAFAGKMVGAQAGTTQGNYADDVYGKAGAD--VKLYPT 168 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E +A + R DA D + S++ +A A+ QGD + Sbjct: 169 ADEANADLESGRLDALAADKFIAADWLKKQGADCCKFLGDIPGSETQIAVALRQGDDDLR 228 Query: 239 NIVSWTHY 246 + Sbjct: 229 EQFNAAIK 236 >gi|289674517|ref|ZP_06495407.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae FF5] Length = 261 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 89/261 (34%), Gaps = 11/261 (4%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + +A+ L D+ RG LK + F V + +G Sbjct: 1 MTKRYSALLTALFASLMLSQTPAHANGLDDVVTRGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + F Sbjct: 61 DIDTAQLLADKL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + ++ L G +I V G ++ L+ FE Sbjct: 116 RAYAPFYLAVFGPPDSPVKDIADLKGKTISVTRGAIEDIELSKVAPE---GAVIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A ++ P L + SP+ + +G E Sbjct: 173 NSTIAAYLAGQTDLIASGNVVMVA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLG 230 Query: 240 IVSWTHYAMVTAEELGITQKN 260 V A L + Sbjct: 231 KVDEILNAAKADGSLEKASQT 251 >gi|187922932|ref|YP_001894574.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] gi|187714126|gb|ACD15350.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 267 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 89/244 (36%), Gaps = 11/244 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + + ++L +L + + +A L +I K G LK + F V A+ +G+D+ Sbjct: 10 RRAWLAALLLSPVLAVNAPAAHADTLDNIAKAGVLKVAVPEDYPPFGSVGADMKPQGYDI 69 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D L+ ++ K++ +P+N+ R LQ+ ++D++ + T RE + F Sbjct: 70 DTAALLAKSM---NVKLELVPVNSANRIPYLQTGKVDLVISSLGKTPDREKV--IDFSTA 124 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 QG +S + L+G ++ G E+ L FE Sbjct: 125 YAPYYQGVFGPADIKVSGPADLTGKTVGATRGALEEIGLTQMAP----NATIKRFEDNNA 180 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AA+ + + A+ P +I SP + + + V Sbjct: 181 TIAAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEPKFVIKNSPCFVGMNKNEPRLQQKV 238 Query: 242 SWTH 245 + Sbjct: 239 NAAI 242 >gi|33596086|ref|NP_883729.1| putative amino-acid ABC transporter, periplasmic amino acid-binding protein [Bordetella parapertussis 12822] gi|33601482|ref|NP_889042.1| putative amino-acid ABC transporter, periplasmic amino acid-binding protein [Bordetella bronchiseptica RB50] gi|33573089|emb|CAE36731.1| putative amino-acid ABC transporter, periplasmic amino acid-binding protein [Bordetella parapertussis] gi|33575918|emb|CAE32997.1| putative amino-acid ABC transporter, periplasmic amino acid-binding protein [Bordetella bronchiseptica RB50] Length = 262 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 72/241 (29%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + + L+ L + A L IK G +K G F+ A+ GFDV+ RA Sbjct: 8 LLLAGLVPLAMVGTAAQADDLAAIKAAGVIKIGTEGTYAPFSYHDASNKLTGFDVEIGRA 67 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + ++ L K+ D + T R+ F Sbjct: 68 IAQKLGVKAE---FVEGKWDGLIAGLDVKRYDAVINQVGITDARKA--KYDFSDPYISSQ 122 Query: 127 QGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 I+ + I S + L G T+ LA + A + + E Sbjct: 123 AALIVREDNQAIKSFADLKGRKSA-NTLTSNFGKLAQSYGA-----EVVPVQGFNEAIDL 176 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIVSWT 244 + R +A D + K V D S I + + E ++ Sbjct: 177 LMSGRVEATVNDNLSFLDFKKQKPNAKVKVAAYDKSKEFSESGVLIRKNNPELQAAINKA 236 Query: 245 H 245 Sbjct: 237 L 237 >gi|258545105|ref|ZP_05705339.1| ABC superfamily ATP binding cassette transporter, binding protein [Cardiobacterium hominis ATCC 15826] gi|258519624|gb|EEV88483.1| ABC superfamily ATP binding cassette transporter, binding protein [Cardiobacterium hominis ATCC 15826] Length = 268 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 8/223 (3%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 ++K +G ++ G+ + F V ANG +GFDV+ R L+ + D +K +++ + A Sbjct: 22 TPDELKAKGEVRIGVFSDKPPFGYVDANGVSQGFDVEIGRYLTKQLLGDEAKAKFVLVEA 81 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 R L+S ++DI+ N T R + + G + K I S+ +L Sbjct: 82 ANRVEYLRSNKVDIILANFTVTPERAKV--VDYAKPYMKVALGVVSPDKAPIKSIDELKD 139 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ + GTT + F + + +++ E A R DA D + L A Sbjct: 140 KTLLLNKGTTADRY----FSKEHRDIKSLKYDQNTETFNALLDGRGDALAHDNTLLLAWA 195 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + P V + I +APA+ +GD + + AM Sbjct: 196 --KEHPGYSVGITRIGEDDFIAPAVAKGDDALHAWLDEQIDAM 236 >gi|116627888|ref|YP_820507.1| amino acid ABC transporter periplasmic protein [Streptococcus thermophilus LMD-9] gi|116101165|gb|ABJ66311.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus thermophilus LMD-9] Length = 277 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 106/284 (37%), Gaps = 26/284 (9%) Query: 2 YKDF-----FVSILCLIILFFTSFSTNASI--------LGDIKKRGFLKCGINTGLVGFA 48 K ++ + L + + I RG L G+ + F Sbjct: 4 KKILRYLTAVSLVIATVFLITIHKTEAEDTSKLLDSKAVQKIVNRGTLNVGVKQDVPNFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 A ++G +VD + ++ + K+ Y+P+ + R + + ID+L Sbjct: 64 YYSAKTNRYEGMEVDLAKKIADEL---KVKVNYIPVTTQTREPLMDNGTIDLLIGTYTIN 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ S + Y D GF++ K GI+ +S L+G +I V G +T+ L +Y AH Sbjct: 121 DERKASYAI--SNPYYHDQIGFLVLKDSGINKISDLNGKTIGVAQGASTKAALQEYASAH 178 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 N+K++ + E+ + AHR DA++ D S L + + IL + Sbjct: 179 NLKFNYVQLGSYPELAVSLYAHRVDAFSVDKSILSGYESKKTK-----ILNEGFKTQDYG 233 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG--ITQKNINQVSKDTT 269 A + + E + + L + N+ + Sbjct: 234 IASSKSNQELIDYTNDLIAKWQKDGSLQKLYDKYNLKPAKAENK 277 >gi|256847976|ref|ZP_05553420.1| glutamine ABC transporter substrate binding component [Lactobacillus coleohominis 101-4-CHN] gi|256715036|gb|EEU30013.1| glutamine ABC transporter substrate binding component [Lactobacillus coleohominis 101-4-CHN] Length = 281 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 85/239 (35%), Gaps = 9/239 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + I++R + G++ V + NG G+DVD RA+ + Sbjct: 30 ANHQDTWSRIERRHKVIIGVDDSFVPMGFRQKNGKLVGYDVDLARAVFKQYGIKAD---F 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 ++ + L++ ID+L T R+ +AF + + Q + K I++ Sbjct: 87 QTIDWSMKETELKNGTIDLLWNGYSVTPQRQK--KVAFSRVYLLNKQILVTKKSDHINNF 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKY---HPIVFERVEEIDAAYRAHRCDAYTGD 197 +++G ++ VQ G+T L +Y + + P++++ A+R D Sbjct: 145 QEMTGKTLGVQNGSTGMTMLDEYPRLLKDRIKDHKPVLYDTFPNAFIDLNANRIQGILMD 204 Query: 198 ISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + + A + +GD V+ + EL Sbjct: 205 EVYADYYIQHQPDRNAYATYSSSKMPADKFAVGMRKGDRTLRQKVNQGLGRLQKNGELR 263 >gi|68160898|gb|AAY86895.1| lr1665 [Lactobacillus reuteri] Length = 283 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 85/239 (35%), Gaps = 9/239 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + I++R + G++ V + NG G+DVD RA+ K+ + Sbjct: 30 ADTQDTWNRIERRKRVIVGLDDSFVPMDFRQKNGKLVGYDVDLARAVFKQYG---IKVDF 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P++ + L++ ID+L R +AF + Q + KK I ++ Sbjct: 87 QPIDWSMKETELKNGTIDLLWNGYSVNPSRAK--KVAFSRYYLENRQILVTKKKSNIKNL 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYH---PIVFERVEEIDAAYRAHRCDAYTGD 197 + ++G ++ VQ G+T L + K K P++++ A+R D Sbjct: 145 NGMTGKTLGVQNGSTGVTVLDEKPKLLKDKIKHHTPVLYDTFPNAFIDLNANRIQGILMD 204 Query: 198 ISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + + + A + +GD ++ + EL Sbjct: 205 EVYANYYIKHQPNSNSYRTYISKELPMEHFAVGMRKGDKTLKKKINQGLGNLQKNGELR 263 >gi|322372851|ref|ZP_08047387.1| polar amino acid uptake (PAAT) family ABC transporter, amino acid-binding protein [Streptococcus sp. C150] gi|321277893|gb|EFX54962.1| polar amino acid uptake (PAAT) family ABC transporter, amino acid-binding protein [Streptococcus sp. C150] Length = 277 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 107/259 (41%), Gaps = 25/259 (9%) Query: 2 YKDFF----VSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGF 47 +K V+ L + +F S N+ + I KRG L G+ + F Sbjct: 3 FKKILRYLTVATLAIATVFLISSHKTVAEDKSKLLNSKAVQKIVKRGTLNVGVKQDVPNF 62 Query: 48 AEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 A ++G +VD + ++ + K+ Y+P+ + R + + ID+L Sbjct: 63 GYYSAKTNTYEGMEVDLAKKIADEL---KVKVNYIPVTTQTREPLMDNGTIDLLIGTYTI 119 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ S + Y+D GF++ K GI+ +S L+G +I V G +T+ L +Y A Sbjct: 120 NDERKASYAI--SSPYYYDQIGFLVLKDSGINKISDLNGKTIGVSQGASTKAALQEYASA 177 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 HN+K++ + E+ + AHR +A++ D S L + + L + Sbjct: 178 HNLKFNYVQLGSFPELAVSLYAHRVNAFSVDKSILSGYESKKTK-----TLKEGFKTQEY 232 Query: 227 APAIIQGDTEWYNIVSWTH 245 A + + + + + Sbjct: 233 GIASSKSNQDLIDYTNDLL 251 >gi|24379270|ref|NP_721225.1| putative amino acid transporter, amino acid-binding protein [Streptococcus mutans UA159] gi|24377187|gb|AAN58531.1|AE014922_6 putative amino acid transporter, amino acid-binding protein [Streptococcus mutans UA159] Length = 271 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 86/261 (32%), Gaps = 16/261 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 K I L+++ + S+++ L IK +G + +N F V Sbjct: 5 KKILLGIIAALMLVTLAACSSSSKDDSLQKIKNKGKIVVAMNPEFAPFEFKTLVNGKDTI 64 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G DV+ +A++ + +++ ++ ++QS + DI T R+ Sbjct: 65 VGADVEIAKAIAKELGVK---VEFSAMSFNNVLSSVQSGKADIGISGISATKERQKV--Y 119 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K + + L G S+ Q GT E + + Sbjct: 120 DFSDTYYESVNVVIVKKSELAKYKKTNSLKGLSVATQKGTIQETVAKEQL----TGAKIV 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E+ ++ + + + ND + I S A A+ +G Sbjct: 176 SLVQNGEMINELKSGQVNGVVLEKPIAEGYVAKNDDLAIAQIKLKSSSSDAYAVAMPKGS 235 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + V + A ++ Sbjct: 236 SALKKKVDKVIKKLKKANKID 256 >gi|110347317|ref|YP_666134.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1] gi|110287493|gb|ABG65551.1| amino acid ABC transporter substrate-binding protein, PAAT family [Chelativorans sp. BNC1] Length = 289 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 108/279 (38%), Gaps = 16/279 (5%) Query: 1 MY-KDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWK 57 M K + ++L + + A L DIK RG L CG+ F N Sbjct: 12 MKGKSLYAALLVAATPGMWGLSAAEAGTLDDIKARGELICGVLGNSEPFGYEDPGNRQVV 71 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+++D C+ L+ + + R LQ ++D+L+ +T R + Sbjct: 72 GYEIDLCKDLA---GTMDVTPTIKVIAPQARIPELQQGRVDLLAALISYTNERAE--QVD 126 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F D ++ K GI+ + L+ I VQ G E L F + ++ Sbjct: 127 FSNTYLVDSFRCMVKKDSGITGLDGLADKRISVQKGGLIEAALRSQFP----NATVLSYD 182 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAIIQGDTE 236 V E A++ + A + L AL++ + ILP+ ++ A+ +GD + Sbjct: 183 DVSERFVAFQQGKAAATCDRATLLRALQIRAKNEATTTILPEALNMMQKAGFAVRKGDKD 242 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 + + ++ T E G Q ++ ++N D+ R Sbjct: 243 FVDYLNQFL---ATYESSGKGQALFDRWVGASSNYDLSR 278 >gi|113866797|ref|YP_725286.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113525573|emb|CAJ91918.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia eutropha H16] Length = 303 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 76/224 (33%), Gaps = 7/224 (3%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYL 81 L IK G + G + F+ + G+ + + + + +++ Sbjct: 34 TLKKIKDSGVISLGYRESSIPFSYTDGK-EVMGYSHEILLQIVDKVKSELKMPGLQMRLT 92 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ ++ R +Q+ IDI +T L R+ + F + G + K G+ + Sbjct: 93 PITSQNRIPLVQNGTIDIECGSTTNNLERQKQVA--FSNSMFVYGIKMLTRKDSGVKEFT 150 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L ++ AGTT E L M + I + + R A+ D L Sbjct: 151 DLKDRNVVTTAGTTGERLLVKMNGEKAMNMNLISTKDHGQSFLILETGRAAAFVMDEPLL 210 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 Y + ++ V++ + A + D + + Sbjct: 211 YGERTKAKSAADWVVVGAPLQTENYACMFRKDDPSFKKLADGVI 254 >gi|322516341|ref|ZP_08069267.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] gi|322125179|gb|EFX96568.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] Length = 265 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 33/261 (12%), Positives = 75/261 (28%), Gaps = 15/261 (5%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K F ++ L + IK++ + + F V Sbjct: 1 MKKFWFILTALVATCFLVACSGSQGVSPKTIKEKKKIVVATESEFAPFEFKSLVNGKDTL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+ + + +++ ++ ++QS + DI T R+ Sbjct: 61 VGADIELAKAIGKKLGVE---VEFSVMSFDNVLASVQSGKADIAIAGISVTDERKKV--Y 115 Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K +S L+ ++ Q G+ E + Sbjct: 116 DFSDSYYTSENVVIVKKDKVNDYTSTDSLAKQTVGTQKGSVQETVAKKQISKA----SVV 171 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E+ ++ + A + + ND + A A +G Sbjct: 172 SLASNGEMINELKSGQIQAVVLEKAIAEGYIAQNDDLTLANFNLKSDGSDAYAVATRKGS 231 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + ++ + + Sbjct: 232 DDLLKEINAVIKETKDSGQFD 252 >gi|220908696|ref|YP_002484007.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC 7425] gi|219865307|gb|ACL45646.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7425] Length = 259 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 47/225 (20%), Positives = 86/225 (38%), Gaps = 10/225 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + ++L + S A+ L I +RG L + L G +G ++D R L+ Sbjct: 4 MSVFLLLAWLSLPAQAAELKQILQRGRLIVAVKDNLPPLGFRDQGGQLQGLEIDIARQLA 63 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 +F + +++ P+ +R A+ + Q D+ N T R + F P YF G G Sbjct: 64 KELFGTETAVEFKPVANVDRLEAVLTGQADLAIANLTATAGRYRL--VNFTPPYYFTGTG 121 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + K K + ++ L+ + V G++ L + +E Sbjct: 122 ILT-KGKSLQRLTDLNHRPVAVLQGSSAIAQLRFLLP----NVKLVGVNSYQEAKTKLDR 176 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 A D + L + T + + P ++S PLA A +G Sbjct: 177 GEVGAVAADSTVLTGWRQTATN---YYLFPTLLSADPLAIAFPKG 218 >gi|86360898|ref|YP_472785.1| amino acid ABC transporter substrate-binding protein [Rhizobium etli CFN 42] gi|86285000|gb|ABC94058.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 279 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 54/239 (22%), Positives = 94/239 (39%), Gaps = 4/239 (1%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T + S L ++ RG L G + + A+ +GFDVD ++ A+F DP K Sbjct: 20 TPALADGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQGFDVDMGHIVAKALFGDPDK 79 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I+Y+ ++ R + + ++DI + T R + +AF Y +G G ++ Sbjct: 80 IEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAFTIPYYREGVGLMLKGDGKY 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + L A V + A + +E V+ I A + R DA D Sbjct: 138 ADYAALKAAGSSVTISVLQNVYAESMVHAALPEATVDQYESVDLIYQALESGRADAAATD 197 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 S+L P + + A A+ +GD +W N V+ + +T E Sbjct: 198 QSSLAWYMTQ--NPGRYKDAGYGWNPQTYACAVKRGDQDWLNFVNTALHEAMTGVEFDF 254 >gi|312278469|gb|ADQ63126.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus thermophilus ND03] Length = 277 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 101/258 (39%), Gaps = 24/258 (9%) Query: 2 YKDF-----FVSILCLIILFFTSFSTNASI--------LGDIKKRGFLKCGINTGLVGFA 48 K ++ + L + + I RG L G+ + F Sbjct: 4 KKILRYLTAVSLVIATVFLITIHKTEAEDTSKLLDSKAVQKIVNRGTLNVGVKQDVPNFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 A ++G +VD + ++ + K+ Y+P+ + R + + ID+L Sbjct: 64 YYSAKTNRYEGMEVDLAKKIADEL---KVKVNYIPVTTQTREPLMDNGTIDLLIGTYTIN 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ S + Y D GF++ K GI+ +S L+G +I V G +T+ L +Y AH Sbjct: 121 DERKASYAI--SNPYYHDQIGFLVLKDSGINKISDLNGKTIGVAQGASTKAALQEYASAH 178 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 N+K++ + E+ + AHR DA++ D S L + + IL + Sbjct: 179 NLKFNYVQLGSYPELAVSLYAHRVDAFSVDKSILSGYESKKTK-----ILNEGFKTQDYG 233 Query: 228 PAIIQGDTEWYNIVSWTH 245 A + + E + + Sbjct: 234 IASSKSNQELIDYTNDLI 251 >gi|331267208|ref|YP_004326838.1| ABC transporter substrate-binding protein [Streptococcus oralis Uo5] gi|326683880|emb|CBZ01498.1| ABC transporter substrate-binding protein [Streptococcus oralis Uo5] Length = 268 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 88/260 (33%), Gaps = 16/260 (6%) Query: 3 KDFFVSILCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 K +++ L++ L F +T + + IK +G L +N F V Sbjct: 5 KKVLMTMFGLLMFPLLFACSNTQSQGVEAIKAKGKLVVALNPEFAPFEYQKLVDGKNQIV 64 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV+ +A++ + + +++ P++ +L S + D+ T R S Sbjct: 65 GSDVELAKAIAKELGVE---VEFSPMSFDNVLASLDSGKADLAISGVSKTEER--SQVYD 119 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K SV L+ + Q G+ E + +A + Sbjct: 120 FSIPYYTSKNKVIVRKSELTNYQSVKDLAQKKVGAQKGSIQETLAKETLQA----SSLVS 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + ++ + DA + N + D + A A+ + Sbjct: 176 LPKNGNLIIDLKSGQLDAVIFEEPVAKGFVENNPDLAIAEFDFDNDKEDSYAVAMKKDSK 235 Query: 236 EWYNIVSWTHYAMVTAEELG 255 E V T + + EL Sbjct: 236 ELKEAVDKTIQKLKDSGELD 255 >gi|293392696|ref|ZP_06637015.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] gi|291424813|gb|EFE98023.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] Length = 263 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 93/244 (38%), Gaps = 10/244 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K +V+ L I+L + + A L DI++RG L+ + F V + +G+D+ Sbjct: 3 IKRIWVTALGAIVLMAQAGAVQADQLQDIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L+ + K+Q +P+ + R LQ+ ++D++ + RE +AF Sbjct: 63 DMAQYLADKM---KLKLQLVPVTSANRVPYLQTNKVDLVISSLGKNPQREK--AIAFSRA 117 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G + + + + L G +I V G ++ L+D +E Sbjct: 118 YAPFFLGVFGPQAEALKDPAALDGKTIGVTRGAVEDMVLSDSAPK---GAQIKRYEDNNT 174 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +AY + + L + P++ + ++ SP + G+ V Sbjct: 175 TLSAYLSGQVQFVATGN--LVVSAIARQNPAKAPVAKFMLKDSPCYVGLRLGEPALKAKV 232 Query: 242 SWTH 245 Sbjct: 233 DALI 236 >gi|283457668|ref|YP_003362253.1| amino acid ABC transporter/signal transduction system periplasmic protein [Rothia mucilaginosa DY-18] gi|283133668|dbj|BAI64433.1| ABC-type amino acid transport/signal transduction system, periplasmic component [Rothia mucilaginosa DY-18] Length = 276 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 79/217 (36%), Gaps = 8/217 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ GI G + + GFDVD R ++ + +I+++ + R L + Sbjct: 34 KIRIGIKFDQPGLGYQDGS-QYTGFDVDVARYIAGKLGYSEDQIEFVESPSANRENMLNN 92 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAG 153 Q+D++ + R+ + + F Y GQ ++ I L+G ++C G Sbjct: 93 GQVDMIFATYSISDSRKKT--VDFAGPYYTAGQDLLVRADNTDIHGPDDLNGKNLCSVTG 150 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T+ + D F + + + + A DA T D L L T + Sbjct: 151 STSAQKVQDKFAKN---VNLVKQNSYSDCVVALNGGVVDAVTTDDIILAGLAATKANKGK 207 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 ++ + + +G + V+ MV Sbjct: 208 LKVVGAPFTTERYGVGLPKGTDKC-EAVNKAINEMVA 243 >gi|219670748|ref|YP_002461183.1| extracellular solute-binding protein family 3 [Desulfitobacterium hafniense DCB-2] gi|219541008|gb|ACL22747.1| extracellular solute-binding protein family 3 [Desulfitobacterium hafniense DCB-2] Length = 269 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 76/258 (29%), Gaps = 24/258 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKR------------GFLKCGINTGLVGFA 48 M K I+ ++++ + + LK G F Sbjct: 1 MKKSLRNGIIAVVMMGLLALTGCGGNQSQPPANDGANNGANGGEEKVLKIGSAIEYAPFE 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFD+D ++ + ++ + A+ + D + T Sbjct: 61 FMDEKQTPTGFDIDLMNEIAKDLGYTA---KFESSSFDGLVAAIGLGKYDAVISAMTITD 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R + F + Q + K I S L G + VQ GTT + + D Sbjct: 118 DRAK--SVLFSDPYFESAQIIAVKKGSAIKSEQDLKGKKVGVQQGTTGQFAVED------ 169 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + P F+ + + +A D LY N + I+P K Sbjct: 170 LGIDPRKFDTIGDAINDMMIGGSEAVVADTPTLYYFITQNPN-MDIEIIPSAFEKEYFGI 228 Query: 229 AIIQGDTEWYNIVSWTHY 246 A + E + V+ T Sbjct: 229 AFKLDNKELADQVNATLK 246 >gi|319785561|ref|YP_004145037.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171449|gb|ADV14987.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 257 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 88/249 (35%), Gaps = 15/249 (6%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + +S +L + S + ++ +K G F + A+G +GFD+D Sbjct: 5 KWVISATGAAMLATLAGSLS------VQAAEKIKIGTEGAYPPFNTITADGKVEGFDIDI 58 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 AL + + + + + + ALQ+K+ D + + T R+ + F Y Sbjct: 59 ANALCAQMKVE---CEIVTQDWDGIIPALQAKKFDAIIASMSITEERKKQVA--FTNKYY 113 Query: 124 FDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + K ++S + L+G ++ QA TT + + + + EE Sbjct: 114 TTPLALVAPKDTDLTSTEPAALAGKTVGAQASTTQADYAQNEYGKAGAEAKL--YPTQEE 171 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 R DA D L ++ +++ A+ DT + + Sbjct: 172 AITDLTNGRLDAVISDKFVLMDWLKKASDGCCKLVGDVKGTETQAGIAVRLDDTALRDKL 231 Query: 242 SWTHYAMVT 250 + A+V Sbjct: 232 NAAIDAIVA 240 >gi|300908216|ref|ZP_07125682.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri SD2112] gi|300894643|gb|EFK87999.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri SD2112] Length = 289 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 85/239 (35%), Gaps = 9/239 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + I++R + G++ V + NG G+DVD RA+ K+ + Sbjct: 36 ADTQDTWNRIERRKRVIVGLDDSFVPMDFRQKNGKLVGYDVDLARAVFKQYG---IKVDF 92 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P++ + L++ ID+L R +AF + Q + KK I ++ Sbjct: 93 QPIDWSMKETELKNGTIDLLWNGYSVNPSRAK--KVAFSRYYLENRQILVTKKKSNIKNL 150 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYH---PIVFERVEEIDAAYRAHRCDAYTGD 197 + ++G ++ VQ G+T L + K K P++++ A+R D Sbjct: 151 NGMTGKTLGVQNGSTGVTVLDEKPKLLKDKIKHHTPVLYDTFPNAFIDLNANRIQGILMD 210 Query: 198 ISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + + + A + +GD ++ + EL Sbjct: 211 EVYANYYIKHQPNSNSYRTYISKELPMEHFAVGMRKGDKTLKKKINQGLGNLQKNGELR 269 >gi|270291924|ref|ZP_06198139.1| polar amino acid uptake (PAAT) family ABC transporter, amino acid-binding protein [Streptococcus sp. M143] gi|270279452|gb|EFA25294.1| polar amino acid uptake (PAAT) family ABC transporter, amino acid-binding protein [Streptococcus sp. M143] Length = 268 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 86/260 (33%), Gaps = 16/260 (6%) Query: 3 KDFFVSILCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 K +++ L++ L F +T + + IK +G L +N F V Sbjct: 5 KKVLMTMFGLLMFPLLFACSNTQSQGVEAIKAKGKLVVALNPEFAPFEYQKLVDGKNQIV 64 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV+ +A++ + + +++ P++ +L S + D+ T R S Sbjct: 65 GSDVELAKAIAKELGVE---VEFSPMSFDNVLASLDSGKADLAISGVSKTEER--SQVYD 119 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K SV L+ + Q G+ E + + Sbjct: 120 FSIPYYTSKNKVIVRKSELTNYQSVQDLAQKKVGAQKGSIQETLAKETL----QDSSLVS 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + ++ + DA + N + D + A A+ + Sbjct: 176 LPKNGNLITDLKSGQLDAVIFEEPVAKGFVENNPDLAIAEFDFDNDKEDSYAVAMKKDSK 235 Query: 236 EWYNIVSWTHYAMVTAEELG 255 E V T + + EL Sbjct: 236 ELKEAVDKTIQKLKDSGELD 255 >gi|16264001|ref|NP_436793.1| putative ABC transporter periplasmic amino acid-binding protein [Sinorhizobium meliloti 1021] gi|307300146|ref|ZP_07579931.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] gi|15140125|emb|CAC48653.1| putative ABC transporter periplasmic amino acid-binding protein [Sinorhizobium meliloti 1021] gi|306905035|gb|EFN35618.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] Length = 268 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 44/238 (18%), Positives = 83/238 (34%), Gaps = 17/238 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M L+ + +A L DI G L+C + N + GFD Sbjct: 1 MKTSVL--AFGLVAATALTSPAHADKLDDIIASGTLRCAVVLDFPPMGSRDENNEPIGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C L++A+ ++ ER AL S ++D+ +T TL R ++G+ Sbjct: 59 VDYCNDLATALGVTAEIVE---TPFPERIPALMSGRVDVGVASTSDTLERAKTVGM--TV 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++K GI S + G + AGT + L + KA ++ Sbjct: 114 PYFAFEMAVTANEKSGIKSFEDMKGKVVGATAGTYEAIALENQVKAWGEG-EFRPYQTQA 172 Query: 181 EIDAAYRAHRCDAYTGDISA---------LYALKLTNDRPSEHVILPDIISKSPLAPA 229 ++ A + DA + + + + P + + ++ Sbjct: 173 DVFLALSQGQLDATVSTSTVAQSNVKGGKFPGISVVDKAPFDIDYVALFTNREEYGFL 230 >gi|260461902|ref|ZP_05810147.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|259032149|gb|EEW33415.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] Length = 243 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 84/244 (34%), Gaps = 20/244 (8%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L + ++ + LK G F + ++G GFD+D AL Sbjct: 1 MLAMAAGSLSAQAAE-----------KLKIGTEGAYPPFNTITSDGKVVGFDIDIANALC 49 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + + + + + + ALQ+K+ D + + T R+ + F Y Sbjct: 50 AQMKVE---CEIVTQDWDGIIPALQAKKFDAIIASMSITEERKKQVA--FTNKYYTTPLA 104 Query: 129 FIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 + K I+S + L+G ++ QA TT D + + + EE Sbjct: 105 LVALKDSDIASTEPAALAGKTVGAQASTTQATYDQDVYGKAGAEAKL--YPTQEEAITDL 162 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + R DA D L ++ +++ A+ DT + ++ Sbjct: 163 QNGRLDAVISDKFVLMDWMKKASDGCCKLVGDVKGTETQAGIAVRLEDTALRDKLNAAID 222 Query: 247 AMVT 250 A+V Sbjct: 223 AIVA 226 >gi|327438812|dbj|BAK15177.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Solibacillus silvestris StLB046] Length = 264 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 78/249 (31%), Gaps = 12/249 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKANGDW 56 K +L + + + T G L G F + G+ Sbjct: 5 KKFLITMLLMALTIILAACGTADDETSGSATTGEGGGKKLLVGTEATFAPFESMNDKGEI 64 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G DVD A+ I S+I++ + + F + + ++D+ + T R+ + Sbjct: 65 VGIDVDIMNAIGEEIG---SEIEFRNVGWEPVFQQITNGELDLGASGITITDERKET--Y 119 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y ++ + I ++ +L I VQ TT +A + + Sbjct: 120 DFTDPYYEASLMIVVKEDSPIKTLDELKDQKISVQINTTGH--IAAQNLQGKSSSKILAY 177 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E A GD + + N I D K + +G+TE Sbjct: 178 ENQPVAFQEVINGATAAAFGDNAVVIEYLKNNPDSGLKAIESDQFEKEYYGFMVKKGNTE 237 Query: 237 WYNIVSWTH 245 N ++ Sbjct: 238 LLNRLNEGL 246 >gi|30022234|ref|NP_833865.1| arginine-binding protein [Bacillus cereus ATCC 14579] gi|229129434|ref|ZP_04258405.1| Arginine-binding extracellular protein artP [Bacillus cereus BDRD-Cer4] gi|29897791|gb|AAP11066.1| Arginine-binding protein [Bacillus cereus ATCC 14579] gi|228654039|gb|EEL09906.1| Arginine-binding extracellular protein artP [Bacillus cereus BDRD-Cer4] Length = 259 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 88/254 (34%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++IL S +N + L G + + V A+ + G Sbjct: 1 MKKLVSISFALILILSMFSACSNGESKETKGNKKVLVMGTSADYKPYEYVDASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|83747889|ref|ZP_00944921.1| ABC transporter amino acid-binding protein [Ralstonia solanacearum UW551] gi|207739279|ref|YP_002257672.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum IPO1609] gi|83725422|gb|EAP72568.1| ABC transporter amino acid-binding protein [Ralstonia solanacearum UW551] gi|206592652|emb|CAQ59558.1| amino-acid-binding periplasmic protein [Ralstonia solanacearum IPO1609] Length = 280 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 92/249 (36%), Gaps = 13/249 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRAL 67 + L L SF A +I+K L+CG + FA + GFDVD C AL Sbjct: 10 LTVLACLCAASFPVLADQWAEIQKNKELRCGTFADVPPFAAPDQKTREMVGFDVDMCNAL 69 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + + PL+ + R ++ ++D+ N +TL R + F Y + Sbjct: 70 AKRMGVTA---KITPLSVEARVPEVKMGRVDVTVANLAYTLGRAEQIQ--FSDPYYLAKE 124 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + S + G + G+T+EL++ P+ F+ A + Sbjct: 125 MLAVRASDPGKSKADYKGKRLASAKGSTSELSI------KMNGSEPVTFQDTGSAYMAVQ 178 Query: 188 AHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + L + E ++ + + P+ + +G+ + V+ Sbjct: 179 QGKALGIVSNTMTITKLVNQSKTSGIELKVIAEPMIYQPIGVGMKKGEPQLLAKVNEALL 238 Query: 247 AMVTAEELG 255 AM A E+ Sbjct: 239 AMDKAGEIN 247 >gi|325978175|ref|YP_004287891.1| amino acid ABC transporter extracellular amino acid-binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178103|emb|CBZ48147.1| amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 280 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 74/258 (28%), Gaps = 17/258 (6%) Query: 1 MY-KDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M K V L L+ + +T+ K G + G + V Sbjct: 1 MKFKKVLVGALALVSTLTLAACSSLSSKKATSTDQWDTYVKNGEITIGFDNTFVPMGYED 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G GFD+D A+ +++ +N + L + ID++ T R Sbjct: 61 EDGSNVGFDIDLANAVFKEYG---ITVKWQSINWDMKETELNNGTIDLIWNGYSITDERA 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHN 168 + F + Q + K GI+S + + + Q+G++ + K Sbjct: 118 E--KVLFTNPYMVNEQVLVTKKSSGITSFADMKDKVLGAQSGSSGYDAFTSNPEVLKDIV 175 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 +E + + R D D + I+ A Sbjct: 176 SGGDATQYETFTQALIDLKNDRIDGLLIDKVYANYYLEQEGELDNYNIISSEFDGEDFAV 235 Query: 229 AIIQGDTEWYNIVSWTHY 246 + D ++ Sbjct: 236 GARKADKTLVKKINQAFK 253 >gi|167766045|ref|ZP_02438098.1| hypothetical protein CLOSS21_00538 [Clostridium sp. SS2/1] gi|317498084|ref|ZP_07956387.1| bacterial extracellular solute-binding protein, family 3 [Lachnospiraceae bacterium 5_1_63FAA] gi|167712125|gb|EDS22704.1| hypothetical protein CLOSS21_00538 [Clostridium sp. SS2/1] gi|291560003|emb|CBL38803.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SSC/2] gi|316894672|gb|EFV16851.1| bacterial extracellular solute-binding protein, family 3 [Lachnospiraceae bacterium 5_1_63FAA] Length = 261 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 87/252 (34%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V++ ++ + + L G N F + GFD Sbjct: 1 MKKFLTVALAGVLAASMLFTGCSKKEESKVPD--KLIVGTNAEFPPFEYMNDKKQPDGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + + + + ++ + K A++S I+ + T R+ + F Sbjct: 59 IAMIKEIGKRMDKK---VEIQNMEFKSLIGAMESNSINTIIAGMTKTKERQK--SVDFSD 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA-DYFKAHNM---KYHPIVF 176 Y Q I+ K I +SQL G + VQ GTT ++ + + F N K + Sbjct: 114 SYYTSNQAIILKKDSKIKKLSQLEGKKVGVQEGTTGDIIASGEKFGEKNKVIVKTDVKRY 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ + + DA D A + + + ++ D AI +G+T Sbjct: 174 KKGVDAVMDLKNGAIDAVVIDE--KPAQEFVKNNAKKLKLVVDSAGAEYYCIAITKGNTA 231 Query: 237 WYNIVSWTHYAM 248 + ++ A+ Sbjct: 232 YKEEINKQIKAI 243 >gi|170691131|ref|ZP_02882297.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170144380|gb|EDT12542.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 277 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 89/249 (35%), Gaps = 17/249 (6%) Query: 4 DFFVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 F L ++ T + S L + +RG L+ G F +G Sbjct: 12 SLFAVAALLTLVGCTKVAPPEQSAGADSTLKQVLQRGTLRVGDCLTFAPFGFYNKDGQPD 71 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+DVD + L+ + + + R LQ+ ++D++ N L R + Sbjct: 72 GYDVDLAKELAKQMGVKLEVVN---TTSANRIPNLQTSKVDVVFCNFTRNLERAKEIA-- 126 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + ++ K GI S++ ++ +I G+T D ++ NM+ F+ Sbjct: 127 FTNPYVVASEALLVKKSSGIKSINDMANRTIATVKGSTN----GDEVRSLNMQVKIQEFD 182 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + A + + DA D + L + + ++ A + GD W Sbjct: 183 SSQAAILAVKQGQADAMIEDNNFLAYQASLDSNLTVTNEA--LVPLEYNAFGVKAGDQVW 240 Query: 238 YNIVSWTHY 246 N ++ + Sbjct: 241 LNYLNLFLF 249 >gi|302537325|ref|ZP_07289667.1| glutamate binding periplasmic protein [Streptomyces sp. C] gi|302446220|gb|EFL18036.1| glutamate binding periplasmic protein [Streptomyces sp. C] Length = 284 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 34/231 (14%), Positives = 72/231 (31%), Gaps = 11/231 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + + K + GI G +G ++GFDVD ++ + P Sbjct: 30 AASDGGASGGT-----KSDKIVIGIKFDQPGLGLKTPDGKFEGFDVDVATYVAKELGYQP 84 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-K 134 +I++ + ER + + + ++ R+ + F + Q ++ Sbjct: 85 DQIEWKQAVSAERENLISNGDVKFIAATYSINDKRKA--KVDFAGPYFLAHQDLLVRADD 142 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+ V L+ +C G+T+ + F E DA Sbjct: 143 SSITKVEDLNKKKLCSVTGSTSAQNIKKDLAK---DADLQEFPGYSECLTGLENKAVDAL 199 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 T D S L + ++ +S + +GD + ++ Sbjct: 200 TTDNSILAGYAAQEKNKGKFKLVGLSMSNENYGIGLKKGDKDLQTKINAAL 250 >gi|149909832|ref|ZP_01898483.1| hypothetical binding protein component ofABC transporter [Moritella sp. PE36] gi|149807164|gb|EDM67120.1| hypothetical binding protein component ofABC transporter [Moritella sp. PE36] Length = 266 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 51/250 (20%), Positives = 86/250 (34%), Gaps = 16/250 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + L + F S S NA L I + G L+ + G + F N + GF Sbjct: 1 MIKTKISKAIALGTIIFCSASVNAGAILDGIAESGELRACFDAGYMPFEMKAKNNRYIGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD + ++ + + AL + + D++ R ++ + F Sbjct: 61 DVDLGKVMAKQMGVKYIPVN---TAWDGIIPALITGKCDVIMAGMTVNAQR--NMKVNFA 115 Query: 120 PITYFDGQGFI--MHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIV 175 GQ I K I S L+ V + TT E+ + K Sbjct: 116 DPYIVVGQSIILNPKLKGEIKSYKDLNNPKYTVASKLGTTGEVVVKRMLKKAKYN----A 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 FE + + DA D+ + N E ++ + + PL A+ QGD Sbjct: 172 FETETDAALEVINGKADAMIYDMPFVSIYAAQNSDKVEAIL--EPFTYEPLGWAVKQGDP 229 Query: 236 EWYNIVSWTH 245 + N ++ Sbjct: 230 DMINFLNNFL 239 >gi|302338914|ref|YP_003804120.1| extracellular solute-binding protein family 3 [Spirochaeta smaragdinae DSM 11293] gi|301636099|gb|ADK81526.1| extracellular solute-binding protein family 3 [Spirochaeta smaragdinae DSM 11293] Length = 283 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 101/263 (38%), Gaps = 29/263 (11%) Query: 1 MYKD----FFVSILCLIILFFTSFST--------------NASILGDIKKRGFLKCGINT 42 M K + +++ FFT+ N ++ +I +RG LK G++T Sbjct: 1 MKKSRSYVLMLIWFVVLLSFFTACGAPPKEENTAENESQRNGGLIDEISRRGVLKVGMST 60 Query: 43 GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 V +A NG GF++D + L+ + D ++++P AL + + D++ Sbjct: 61 -FVPWAMNDKNGQLIGFEIDVAKRLAKDLGVD---VEFVPTKWSGIIPALLTGKFDVIIG 116 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTL 160 E SL + F + G + +K+ S+ + + V A T T Sbjct: 117 GMGI--RPERSLKVNFTIPYDYSGMAIVANKETAPGYGSLEEFDNPDVTVVARIGT--TA 172 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 AD K + + +F+ + + R A + N + ++ +P Sbjct: 173 ADAAKKYMPNANIKLFDDEAQALQELKTGRAHAMVASAPLPAFQAIENSD-TLYLPIPGT 231 Query: 221 ISKSPLAPAIIQGDTEWYNIVSW 243 ++ P+ AI + + + N+ + Sbjct: 232 FTREPIGFAIRKREADALNVFNS 254 >gi|262404205|ref|ZP_06080760.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. RC586] gi|262349237|gb|EEY98375.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. RC586] Length = 258 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 91/254 (35%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + + K+ ++ GI F+ +A+G KGFD Sbjct: 1 MKKWLVATALIAATVSGVTQA---------KEWKTVRFGIEGAYPPFSWTEADGSLKGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + + +P + +L +++ D + T R+ + + F Sbjct: 52 VDMANALCTEMKVE---CKIVPQDWDGIIPSLLARKYDAIIAAMSITEERK--MKVDFTG 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 FI K ++ + L G I VQ TT + L+D + + + Sbjct: 107 KYALIPNKFIAKKGANLTFTKEGLKGVKIGVQRATTHDKYLSDNY---GDAVDIVRYGSF 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E R A GD SAL L + + ++ + A+ + D Sbjct: 164 DEAYLDLANGRIAAVLGDASALEEGVLNKAGGDGYEFVGPSLTDPKWFGEGMGIAVRKQD 223 Query: 235 TEWYNIVSWTHYAM 248 + ++ A+ Sbjct: 224 KDLTEKLNAAIAAL 237 >gi|294812666|ref|ZP_06771309.1| putative ABC transporter solute-binding protein [Streptomyces clavuligerus ATCC 27064] gi|326441179|ref|ZP_08215913.1| putative ABC transporter solute-binding protein [Streptomyces clavuligerus ATCC 27064] gi|294325265|gb|EFG06908.1| putative ABC transporter solute-binding protein [Streptomyces clavuligerus ATCC 27064] Length = 354 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 78/241 (32%), Gaps = 15/241 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74 T + + + +I+KR L G++ + GD GFD+D RA++ + D Sbjct: 81 SLTPSAADGPSVREIQKRRKLIVGVDQNSYRWGYRDPATGDLMGFDIDLARAIAEDLLDK 140 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + + ++ +R LQ ++D++ R T R + F + GQ + ++ Sbjct: 141 DGTVVFRAVSTDQRAPLLQEGKLDLVVRTMTITCKRAREVA--FSTAYFETGQQVLAPRQ 198 Query: 135 KGISSVSQ-LSGASICVQAGTTTELTLADYFKAH---------NMKYHPIVFERVEEIDA 184 I+ L G +C G+T L + + + Sbjct: 199 SKITGHDASLKGKKVCTAEGSTAFDALEENAYGAIFRDPGDGTAADEDILTVPNQLDCLV 258 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + DA D + P+ + P A G + V+ Sbjct: 259 RVQEGLADAVVTDSALAAGQAAQ--DPTVELKGPRFKKVEYYGVAAAPGKDDLVRRVNKV 316 Query: 245 H 245 Sbjct: 317 L 317 >gi|115358997|ref|YP_776135.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115284285|gb|ABI89801.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 266 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 78/240 (32%), Gaps = 13/240 (5%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 + ++ + S A +L +K+ G LK + F A G +GFDVD +A+ Sbjct: 11 GLAAALLCVVATASHAADLLDTVKQAGVLKIALEGTYPPFDYRNAEGQLEGFDVDVAKAV 70 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++ + P Q++ LQ+ + D++ T R L F + Sbjct: 71 AARLGVKP---QFVTTEWSGILAGLQAGKFDVIVNQVAITPSR--QQALDFSMPYVYSSA 125 Query: 128 GFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + + S+ +L G + V G+ + V+ E Sbjct: 126 QLLQRQNDTRAFKSLDELKGKKVGVTMGSNYVDLVKTVPA-----IDLQVYPGTPENLRD 180 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A R DA D + + + N + + +G+ ++ + Sbjct: 181 LAAGRIDAAVNDR-LMLSYLIKNSHLPLRPGSVLAGGEDRMGIPFRKGNPKFAKAIDDAV 239 >gi|121610274|ref|YP_998081.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121554914|gb|ABM59063.1| extracellular solute-binding protein, family 3 [Verminephrobacter eiseniae EF01-2] Length = 275 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 99/290 (34%), Gaps = 26/290 (8%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 +F + LC +L + + +A + +IKK+G + G+ + V + G+D D Sbjct: 12 NFATAALCGALLSSHALNASAQSVEEIKKKGTVTIGVLVDFPPYGTVDNSNQPDGYDADV 71 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + L+ ++ +P+ R L + ++D+L + T R + F Sbjct: 72 AKLLAKD---WGVRLNLVPVTGPNRIPFLLTNKVDLLIASFAPTPERAKQVQ--FSRPHS 126 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 HKK I + + L G I V +T + L F+ Sbjct: 127 AATIVLYGHKKLSIKTPADLKGVRIAVARASTQDTALTAVAPE---GAEIRRFDDDASAM 183 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A + + DA + L ++ + +APA+ G E V+ Sbjct: 184 QALLSGQVDALGCATTI-AQRIDQRTNGEYENKL--VLRQQYMAPAMRLGRPELLKGVNT 240 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTK 293 K ++ N +++L +D S +L L+ Sbjct: 241 ------------FVGKYVD---NGGLNKLYKKWLQVDLPSMPATSLPLSN 275 >gi|251790186|ref|YP_003004907.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] gi|247538807|gb|ACT07428.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] Length = 278 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 94/242 (38%), Gaps = 13/242 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCR 65 +S + + FTS A +L D+ +G LKC + + + F+ AN G DVD C Sbjct: 6 LSAVFASSVLFTSIGAQADLLADMTAQGELKCAVYSDVPPFSSPDANTRQLVGMDVDLCN 65 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL+ + K+ +P + + R + + + D+L N +T R + F Y Sbjct: 66 ALAKQMG---LKLTLVPTSVEARIAVIVTGRADVLIANLAYTKTR--GNQIQFSDPYYVA 120 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + ++ K+ ++ G I GTT+E ++ + + F+ A Sbjct: 121 KEMLLVKKENADQTLEYFKGKRISATKGTTSEQSI------NLKGGKAVTFQDSASAFLA 174 Query: 186 YRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 ++ + ++ + E ++ + ++ P+ + + + V+ + Sbjct: 175 LEQNKAVGFVTNMMTGIKMISQAKKDGIELAMIKEPMALEPIGVGMKRDEPALLAAVNTS 234 Query: 245 HY 246 Sbjct: 235 LK 236 >gi|157363723|ref|YP_001470490.1| extracellular solute-binding protein [Thermotoga lettingae TMO] gi|157314327|gb|ABV33426.1| extracellular solute-binding protein family 3 [Thermotoga lettingae TMO] Length = 241 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 95/258 (36%), Gaps = 29/258 (11%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F+ ++ L + F+ + G + F + NG + G Sbjct: 1 MKFTRAMFLILILLSAMTFS---------------RTITVGTSADFPPFEYI-ENGQFVG 44 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D R ++ D ++++ ++ AL++ Q+D+++ T R+ + F Sbjct: 45 FDMDLMREIAKIAGFD---LKFVDMSFDSLIPALRAGQVDVVAAAMTITDERK--QVVDF 99 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVF 176 + Q I+ + ++ S I VQ GTT +L D + M + + + Sbjct: 100 SIPYWTADQSVIVKSESPLTITVLFSKGKIGVQTGTTGDLWCTDNLVSTGMLPEKNLKRY 159 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + DA D A + +P ++ I + A+ +G+ E Sbjct: 160 DTFVLALSDLLNGNIDAIVLDSP--VANRFAATKPV--RVVGIITTGEQYGVAVRKGEKE 215 Query: 237 WYNIVSWTHYAMVTAEEL 254 ++ + + ++ Sbjct: 216 LLEKINNAIKVLNESGKM 233 >gi|146319723|ref|YP_001199435.1| amino acid ABC transporter periplasmic protein [Streptococcus suis 05ZYH33] gi|146321919|ref|YP_001201630.1| amino acid ABC transporter periplasmic protein [Streptococcus suis 98HAH33] gi|253752713|ref|YP_003025854.1| putative amino-acid ABC transporter extracellular-binding protein [Streptococcus suis SC84] gi|253754539|ref|YP_003027680.1| amino-acid ABC transporter extracellular-binding protein [Streptococcus suis P1/7] gi|253756472|ref|YP_003029612.1| amino-acid ABC transporter extracellular-binding protein [Streptococcus suis BM407] gi|145690529|gb|ABP91035.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus suis 05ZYH33] gi|145692725|gb|ABP93230.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus suis 98HAH33] gi|251817002|emb|CAZ52651.1| putative amino-acid ABC transporter extracellular-binding protein [Streptococcus suis SC84] gi|251818936|emb|CAZ56779.1| putative amino-acid ABC transporter extracellular-binding protein [Streptococcus suis BM407] gi|251820785|emb|CAR47547.1| putative amino-acid ABC transporter extracellular-binding protein [Streptococcus suis P1/7] gi|292559334|gb|ADE32335.1| extracellular solute-binding protein [Streptococcus suis GZ1] gi|319759129|gb|ADV71071.1| amino acid ABC transporter periplasmic protein [Streptococcus suis JS14] Length = 267 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 68/221 (30%), Gaps = 20/221 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI--------LGDIKKRGFLKCGINTGLVGFAEVKA 52 M K + L + + +++A L IK+ G ++ G ++ Sbjct: 1 MKKIAMFTSLLFAGIVLAACNSSAGTSNSTDQTLLAQIKEEGVIQIGTEGAYAPYSYHDE 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 +G G+DV+ A++ + ++++ L + + D ++ T R+ Sbjct: 61 SGKLVGYDVEVAEAVAEKLGVK---VEFVETEWDSMIAGLDAARFDTIANQVGITDERKA 117 Query: 113 SLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F + + K I+S + LSG + AD + + Sbjct: 118 --KYDFSTPYTYIYGALVTQKDNTDITSFADLSGKKSANSLTS----NWADLARENG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 + + + R DA D + Sbjct: 170 EVVGVDGFSQAVELLNTGRVDATINDNLVYLDYVKQHADAP 210 >gi|311279130|ref|YP_003941361.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] gi|308748325|gb|ADO48077.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] Length = 266 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 84/254 (33%), Gaps = 20/254 (7%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M V + L+ ++L +K+RG L+ G+ F+ + Sbjct: 1 MKLALLGRQALMGVMAVALMAGVSAKTFAAENLLNQVKERGSLRVGLEGTYPPFSFQGDD 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+V+F L+ + P +L SK+ID++ + R+ Sbjct: 61 GKLTGFEVEFANELAKHLGVKAD---LKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I + + L G + V GT E ++ + + Sbjct: 117 -KYDFSTPYTVSGIQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRKNVQGV 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + + S+ A+ Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALR 229 Query: 232 QGDTEWYNIVSWTH 245 +G+ + V Sbjct: 230 KGNDDLLKAVDNAI 243 >gi|293364416|ref|ZP_06611142.1| polar amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|307702619|ref|ZP_07639571.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] gi|291317262|gb|EFE57689.1| polar amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|307623735|gb|EFO02720.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] Length = 268 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 86/260 (33%), Gaps = 16/260 (6%) Query: 3 KDFFVSILCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 K +++ L++ L F +T + + IK +G L +N F V Sbjct: 5 KKVLMTMFGLLMFPLLFACSNTQSQGVEAIKAKGKLVVALNPEFAPFEYQKLVDGKNQIV 64 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV+ +A++ + + +++ P++ +L S + D+ T R S Sbjct: 65 GSDVELAKAIAKELGVE---VEFSPMSFDNVLASLDSGKADLAISGVSKTEER--SQVYD 119 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K SV L+ + Q G+ E + + Sbjct: 120 FSIPYYTSKNKVIVRKSELTNYQSVQDLAQKKVGAQKGSIQETLAKETL----QNSSLVS 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + ++ + DA + N + D + A A+ + Sbjct: 176 LPKNGNLITDLKSGQLDAVIFEEPVAKGFVENNPDLAIAEFDFDNDKEDSYAVAMKKDSK 235 Query: 236 EWYNIVSWTHYAMVTAEELG 255 E V T + + EL Sbjct: 236 ELKEAVDKTIQKLKDSGELD 255 >gi|195973406|gb|ACG63349.1| allantoate transport periplasmic binding protein [Klebsiella oxytoca M5al] Length = 261 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 87/245 (35%), Gaps = 11/245 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L + A L DI+KRG ++ + V + +G+D Sbjct: 1 MKK-LLIALAGAACLLTNLSAAKADQLQDIEKRGTIRIAVPQDFPPLGSVGTDLQPQGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D R L+ + K+Q +P+ + R LQ+ ++D++ + RE + F Sbjct: 60 IDMARYLAKQM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKV--IDFSR 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G K + + LSG S+ V G ++ L + +E Sbjct: 115 AYAPFFLGVFGPKGAELKDPAALSGKSVGVTRGAVEDMVLTSVAPK---EAQIKRYEDNN 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +AY + + + A+ + + + ++ SP + + + Sbjct: 172 TTLSAYLSGQVQYVATGNLVVAAI--SRQNADKAPVPSFMLKDSPCFIGLKKNEPALKAK 229 Query: 241 VSWTH 245 V Sbjct: 230 VDALI 234 >gi|322375116|ref|ZP_08049630.1| polar amino acid uptake (PAAT) family ABC transporter, amino acid-binding protein [Streptococcus sp. C300] gi|321280616|gb|EFX57655.1| polar amino acid uptake (PAAT) family ABC transporter, amino acid-binding protein [Streptococcus sp. C300] Length = 268 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 86/260 (33%), Gaps = 16/260 (6%) Query: 3 KDFFVSILCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 K +++ L++ L F +T + + IK +G L +N F V Sbjct: 5 KKVLMTMFGLLMFPLLFACSNTQSQGVEAIKAKGKLVVALNPEFAPFEYQKLVDGKNQIV 64 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV+ +A++ + + +++ P++ +L S + D+ T R S Sbjct: 65 GSDVELAKAIAKELGVE---VEFSPMSFDNVLASLDSGKADLAISGVSKTEER--SQVYD 119 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K SV L+ + Q G+ E + + Sbjct: 120 FSIPYYTSKNKVIVRKSELTNYQSVKDLAQKKVGAQKGSIQETLAKETL----QDSSLVS 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + ++ + DA + N + D + A A+ + Sbjct: 176 LPKNGNLITDLKSGQLDAVIFEEPVAKGFVENNPDLAIAEFDFDNDKEDSYAVAMKKDSK 235 Query: 236 EWYNIVSWTHYAMVTAEELG 255 E V T + + EL Sbjct: 236 ELKEAVDKTIQKLKDSGELD 255 >gi|299531723|ref|ZP_07045127.1| extracellular solute-binding protein [Comamonas testosteroni S44] gi|298720282|gb|EFI61235.1| extracellular solute-binding protein [Comamonas testosteroni S44] Length = 269 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 90/233 (38%), Gaps = 6/233 (2%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFDDPSKIQYLP 82 + IK+ G + G GF+ + G+ +D C A+ + + I+Y Sbjct: 1 MKKIKESGTITLGHREASFGFSYISDTATPIGYSLDICMKIVDAIKAELKQPKIDIKYQV 60 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ R + + +D+ +T + R+ + F P + + GI S++ Sbjct: 61 VTSQNRIPLVTNGTVDLECGSTTNLVERQKDVA--FSPDIFRYNVRMAVKASSGIKSIAD 118 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G S+ AGTT+ L + + ++ + + + + R A+ D L Sbjct: 119 LQGKSVVTTAGTTSFRLLRETNRGKVLEVTQLSGKDHLDSFLLLNSGRAAAFVLDDILLA 178 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L P E +I + + + + + D ++ +V M+ + E+ Sbjct: 179 GLIANTQNPKEFIITGENLRTENQSLMLRKDDPQFKALVDRVVVGMMKSGEME 231 >gi|228935474|ref|ZP_04098292.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228824226|gb|EEM70040.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 259 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 90/254 (35%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N K + L G + + V+A+ + G Sbjct: 1 MKKLLSISFALILIVSMFSACSNGEEKATGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDIAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFKVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|291451363|ref|ZP_06590753.1| sugar-binding protein [Streptomyces albus J1074] gi|291354312|gb|EFE81214.1| sugar-binding protein [Streptomyces albus J1074] Length = 321 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 81/230 (35%), Gaps = 14/230 (6%) Query: 22 TNASILGDIKKRG----FLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS 76 + L IK R L GI+ + G +GFD+D RA++ + DP Sbjct: 67 AEGATLERIKSRTDKPRKLIVGIDQNSYRWGYRDPATGSLEGFDIDLVRAIAEELMGDPE 126 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 + + + R A+ S ++D++ R T + +AF + GQ ++ K Sbjct: 127 AVVFRAIPTNRRVQAIDSGEVDMVVRTMTITC--DRIKEVAFSTAYFETGQQLLVPKGSR 184 Query: 137 IS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ + L G +C AG+T L + + + + + DA Sbjct: 185 ITGHDTSLKGRKVCAAAGSTA---LTELEREAHGADISTTVPNQLDCLVRLQLGEVDAVV 241 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D + + ++ + ++ A+ + + V+ Sbjct: 242 TDSALAAGQAAQDP---MVELVGEPFTEEFYGVAMHKDAKDLVARVNQVL 288 >gi|241759765|ref|ZP_04757865.1| histidine-binding periplasmic protein [Neisseria flavescens SK114] gi|241319773|gb|EER56169.1| histidine-binding periplasmic protein [Neisseria flavescens SK114] Length = 267 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 90/256 (35%), Gaps = 11/256 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + + L L T+ ++ + + G N F + + G +GFDV Sbjct: 3 IKKWLATALACSALALTACGGQSNNASAPTDK-VYRVGSNAEFAPFESLDSAGKVEGFDV 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ A K+++ + F +L + +DI+ T + + F Sbjct: 62 DLMNAMAKA---GNFKVEFKHQPWESLFPSLNNGDVDIVMSGVTITD--DRKQSMLFSDP 116 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q ++ K K ++S L + V G T + +++ N FE V Sbjct: 117 YFEITQVVLVPKGKKVASSEDLKNMAKVGVVTGYTGDFSVSKLLG--NDNPKIARFESVP 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 I D+ D + + N + + + LPD + A +GD Sbjct: 175 LIIKELENGGLDSVVSDSAVIANYVKNNPTKGLDFISLPD-FTIENYGIAARKGDEATIK 233 Query: 240 IVSWTHYAMVTAEELG 255 +++ + + E Sbjct: 234 MLNDALKKVRESGEYD 249 >gi|319942095|ref|ZP_08016414.1| ABC-type amino acid transport/signal transduction system [Sutterella wadsworthensis 3_1_45B] gi|319804479|gb|EFW01357.1| ABC-type amino acid transport/signal transduction system [Sutterella wadsworthensis 3_1_45B] Length = 277 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 47/221 (21%), Positives = 95/221 (42%), Gaps = 11/221 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L IK+ G + G+ + F V + G + G+DV F L+ + ++Y+ Sbjct: 29 EARPLDVIKQSGEVVIGVFSDKAPFGYVDSQGKYAGYDVYFGDRLAKDLGVK---VKYIS 85 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 ++ R L + ++DI+ N T + + + F G + + I+ V Q Sbjct: 86 VDPASRVEFLVTGKVDIILANFTVTK--DRAEKVDFALPYMKVALGVVSPESAVITDVKQ 143 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ + GTT E F+ ++ K +++ + A R DA++ D + + Sbjct: 144 LDGKTLIIAKGTTAEPY----FEKNHPKVKLQKYDQYTDAYNALLDGRGDAFSTDNTEVL 199 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A L + V +P + +APA+ +G+ + ++ Sbjct: 200 AWALVHK--GFKVGIPSLGDLDTIAPAVQKGNKGLLDWINQ 238 >gi|322376232|ref|ZP_08050725.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M334] gi|321282039|gb|EFX59046.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M334] Length = 271 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 82/254 (32%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L F + + + S + IK++G L + F V Sbjct: 4 KKWIFVLCSFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K +++ L A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKALTSLESANIAAQKGTVPESMVKEQLPKA----Q 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + + A A+ + Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNADLAVATVSLKMKDGEANAVALRK 234 Query: 233 GDTEWYNIVSWTHY 246 + +V Sbjct: 235 NSADLKEVVDKVIQ 248 >gi|260598415|ref|YP_003210986.1| cystine transporter subunit [Cronobacter turicensis z3032] gi|260217592|emb|CBA31849.1| Cystine-binding periplasmic protein [Cronobacter turicensis z3032] Length = 266 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 88/254 (34%), Gaps = 20/254 (7%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M F V + L+ ++L +K+RG L G+ F+ + Sbjct: 1 MKLALFGRQALMGVMAVALVAGMSVKTYAAENLLNKVKERGTLLVGLEGTYPPFSFQGDD 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+V+F AL+ + P +L SK+ID++ + R+ Sbjct: 61 GKLTGFEVEFAEALAKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K+ + I + + L G + V GT E ++ + + Sbjct: 117 -KYDFSTPYTVSGIQALVKKENAQSIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGV 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + + S+ A+ Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTNNTLAAAGEPFSRQEAGVAVR 229 Query: 232 QGDTEWYNIVSWTH 245 +G+ ++ V Sbjct: 230 KGNDDFVKAVDSAI 243 >gi|317404136|gb|EFV84584.1| extracellular solute-binding protein, family 3 [Achromobacter xylosoxidans C54] Length = 272 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 94/262 (35%), Gaps = 17/262 (6%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K F + L LI S + +A L DI K G L+ I+ G+ + A Sbjct: 1 MNKSVFPPRLRAAFAGLALIGGLAVSGAAHADQLDDIMKAGKLRVAIDLGVPPYGMKDAA 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + G DV+ R L+ + ++ +P R LQ+ + DI+ + T R+ Sbjct: 61 LNPTGSDVETARLLAKGLG---VTLEIVPTTGANRVPFLQTGKADIVISSMSVTPERQKV 117 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + ++S + LS + GTT + L Sbjct: 118 --IDFSTPYAAILAVVGAPRDMKLTSAADLSSKKVIATRGTTNDTELTRIAPK---DAQI 172 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I F+ A + + D + + L + P++ + ++ + LA + + Sbjct: 173 IRFDDDATSITAVVSGQADIFATAPALLRTI--NEKAPAKQMESKFVMRLNMLAIGLRKN 230 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 + + + A + + EL Sbjct: 231 EPALKDKLDGWVRANLKSGELN 252 >gi|170692054|ref|ZP_02883218.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170143338|gb|EDT11502.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 258 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 87/245 (35%), Gaps = 12/245 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++L +L T +A L +I K G LK + F V + +G+D Sbjct: 1 MRRTLLAALLASPVLAVT-VPAHADTLDNIAKAGVLKVAVPEDYPPFGSVGPDMKPQGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ L+ ++ K++ +P+N+ R LQ+ ++D++ + T RE + F Sbjct: 60 IETAALLAKSM---NVKLELVPVNSANRIPYLQTNKVDLVISSLGKTPDREKV--IDFST 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 QG +S + L+G ++ G EL L FE Sbjct: 115 AYAPYYQGVFGPADVKVSGPADLTGKTVGATRGALEELGLTQMAP----NATIKRFEDNN 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 AA+ + + A+ P +I SP + + + Sbjct: 171 ATIAAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEPKFVIKNSPCFVGMNKNEPRLQQK 228 Query: 241 VSWTH 245 V+ Sbjct: 229 VNAAI 233 >gi|169334519|ref|ZP_02861712.1| hypothetical protein ANASTE_00922 [Anaerofustis stercorihominis DSM 17244] gi|169259236|gb|EDS73202.1| hypothetical protein ANASTE_00922 [Anaerofustis stercorihominis DSM 17244] Length = 278 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 54/296 (18%), Positives = 107/296 (36%), Gaps = 30/296 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIK------KRGFLKCGINTGLVGFAEVKANG 54 M K ++ + L + S + + K L GI+ V NG Sbjct: 1 MKKGKKIAAIVLTSVLGFSLLSGCGSKDTVSAEAQFTKDKTLVVGIDNTYPPMEYVDKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD++F +A+ + ++++ + F L + + D++ + R+ L Sbjct: 61 KTVGFDIEFAKAIGEKMGRK---VEFVNSSWDAIFAGLDADKYDLVISSVGVNKDRQEQL 117 Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 L + Q I K I SV +L+G + VQ TT+ T Y+ + + + Sbjct: 118 AL--SNPYLANQQVIISSKSGKQIKSVEELAGKKVGVQVSTTSNDTCN-YYLSKGIDFDL 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 ++ + E A D D + + ++ V D ++ P+A A + Sbjct: 175 REYDGMTEAFVALEGGSVDCVVTD--LVVGEYYVHKNTNKFVKTCDKLTNEPIAVAAKKS 232 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL 289 + + ++ EEL ++K + ++ G D + NI L Sbjct: 233 NQALIDKINPIL------EELSKDGT----MTKIS-----KKVFGKDLTQNIDTTL 273 >gi|238784713|ref|ZP_04628717.1| Cystine-binding periplasmic protein [Yersinia bercovieri ATCC 43970] gi|238714392|gb|EEQ06400.1| Cystine-binding periplasmic protein [Yersinia bercovieri ATCC 43970] Length = 253 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 78/241 (32%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + + L +L +K+RG L G+ F+ +G GF+VDF A Sbjct: 1 MVAVALATGLNVKSYAAGDLLNQVKERGTLIVGLEGTYPPFSFQGEDGKLTGFEVDFANA 60 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L+SK+ID+ + R+ F G Sbjct: 61 LAEHMGIKA---KITPTKWDGMLASLESKRIDVAINQVTISDERKK--KYDFSTPYTVSG 115 Query: 127 QGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + K + L G + V G+ E L + K ++ Sbjct: 116 IQVLTKKGNEGNFTKPEDLEGKKVGVGLGSNYEQWLRENLK----GVDIRTYDDDPTKYQ 171 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + ++ A+ + + E ++ Sbjct: 172 DLRVGRTDAILVDR--LAALDLVKKTNNTLAVAGPAFARQESGVALRKDNPELLAAINQA 229 Query: 245 H 245 Sbjct: 230 I 230 >gi|227524321|ref|ZP_03954370.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus hilgardii ATCC 8290] gi|227088552|gb|EEI23864.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus hilgardii ATCC 8290] Length = 283 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 84/256 (32%), Gaps = 16/256 (6%) Query: 2 YKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 K V + L++ + TN + K+ + G++ G V + Sbjct: 6 KKCPLVIVTLLLMFVLSGCRFESRQKMETNPDTWSIVSKQKKIVIGLDDGFVPMGFETKS 65 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G G+DVD +A+ K+ + P++ L++ ID++ R Sbjct: 66 GKIVGYDVDLAKAVFKQYG---IKVNFQPIDWSMNVTELRNGTIDLIWNGFSMNPQRAK- 121 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH- 172 + F + Q I +K I+S + + VQAG+ + + K + Sbjct: 122 -KVTFSEPYLVNKQVLISKEKNHINSFADMKNRVAGVQAGSAGAMDIDSQPKLLKDRIKN 180 Query: 173 --PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 PI+++ E + R D + + +P K + Sbjct: 181 HTPILYDSFTEAFIDLNSDRIQGLLIDSIYAGYYIGHQKDRATYQSVPSQFPKEYYGVGM 240 Query: 231 IQGDTEWYNIVSWTHY 246 +GDT+ + Sbjct: 241 RKGDTKLKQKIDAGLN 256 >gi|325978614|ref|YP_004288330.1| amino acid ABC transporter amino acid-binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178542|emb|CBZ48586.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 273 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 94/281 (33%), Gaps = 18/281 (6%) Query: 1 MY-KDFFVSILCL---IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKAN 53 M K F+ +L L + L S+N ++ I K+G L I+ F V Sbjct: 1 MKIKKIFLGVLALISVLTLAACGSSSNENLQEKIVKKGKLVVAISPDYAPFEFKALVNGK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G DV+ +A++ + + ++ ++ +LQ+ + D+ +T R Sbjct: 61 DTIVGADVELAQAIADELGVE---LELSSMSFDNVLSSLQTGKADMAISGLSYTEERAKV 117 Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F Y ++ +SV LSG + VQ GT E D Sbjct: 118 --YDFSDAYYETENAILVKASDVDTYTSVDSLSGLKVAVQKGTIEENLAKDQL----SDS 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + + E ++ + A + N + + A A+ Sbjct: 172 NIVSLTAMGEAINELKSGQVQAVDLEKPVAEGYLSQNSDLALASFALETGEGDAKAVAMP 231 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + E +V+ + ++ + Q++ D + D Sbjct: 232 KDSGELVKMVNKVIKKLAKEDKYKQFISDAAQLTGDAVDED 272 >gi|157370637|ref|YP_001478626.1| extracellular solute-binding protein [Serratia proteamaculans 568] gi|157322401|gb|ABV41498.1| extracellular solute-binding protein family 3 [Serratia proteamaculans 568] Length = 257 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 88/253 (34%), Gaps = 22/253 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L+ S A I G++ G F + +G+ GFD Sbjct: 1 MKK----TLAVLLTSLALSGPAAAQTFDTI------SFGVDGGYPPFDVLAPSGEITGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + +K ++ + AL + + D + + T R+ + F Sbjct: 51 IDIANALCTQL---HAKCVFVKQPFESMIAALNAHKFDAIIASLTITDERKK--EVDFTD 105 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K + V+ L G ++ VQ G+ E ++ + + Sbjct: 106 RYYRSSAQLVARKGSALLPDVASLKGKTVGVQTGSIHEAYAKQHWG--GKGVKIVSYANQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDT 235 + + + R +A D + + + R + +I S + A+ + + Sbjct: 164 DNVYLDLMSGRINASLQDNTQAASSFIDTPRGQKFAFAGPVIEDSSISSDVGIAVGKDNP 223 Query: 236 EWYNIVSWTHYAM 248 + ++ A+ Sbjct: 224 ALRDALNGAIKAI 236 >gi|89900317|ref|YP_522788.1| extracellular solute-binding protein [Rhodoferax ferrireducens T118] gi|89345054|gb|ABD69257.1| extracellular solute-binding protein, family 3 [Rhodoferax ferrireducens T118] Length = 255 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 82/251 (32%), Gaps = 24/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + L SF+ LK I+ F A+G GFD Sbjct: 1 MKK--LLLAIAIGSLCAVSFAQGKD----------LKVAIDPTYEPFTFKTADGKPTGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + K ++ LQ+K+ D++ + T + + F Sbjct: 49 VDIANALCEQV---KRKCVFVEQVWDSMIPGLQAKKYDVIISSMSITA--DRLKVIDFTN 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ K + L G + V G+T E K + +E + Sbjct: 104 KYYNTPSRIVVKKDVKFDGPASLKGKKLGVLKGSTQEKYAMGELKTVG--VEVVPYEAQD 161 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 ++ ++ R D D + L+ ++ ++ + + +G+T Sbjct: 162 QVYLDIKSGRLDGTVADFVEVTGGFLSKPEGKDYNLVGPELYTEKYFGTGVGIGLRKGET 221 Query: 236 EWYNIVSWTHY 246 N ++ Sbjct: 222 ALKNELNAAIK 232 >gi|294631810|ref|ZP_06710370.1| glutamate binding protein [Streptomyces sp. e14] gi|292835143|gb|EFF93492.1| glutamate binding protein [Streptomyces sp. e14] Length = 278 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 83/249 (33%), Gaps = 15/249 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANG 54 M ++ +++ S + S D K G + GI G + G Sbjct: 1 MKLRKVTAVSAVVLALAVSATACGS--DDKKDEGSSGGGKKIAIGIKYDQPGLGQKTPQG 58 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFDVD + ++ + + +I++ + +R LQ ++ ++ T RE Sbjct: 59 -YSGFDVDVAKYVAKKLGYNEDQIEWKESKSADRETMLQRGDVEFIAATYSITPEREK-- 115 Query: 115 GLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F Q ++ I S + L+ +C G+T+ + D K + Sbjct: 116 KVDFAGPYLLAHQDVLVRADDTSIKSPADLNSKKLCSVTGSTSAQNIKDTLA---PKANL 172 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + + DA T D S L + + + ++ + +G Sbjct: 173 LKYPTYSACLTGLQNKAIDALTTDDSILAGYAAQDQFKGKFKLGGLKMTNENYGIGVKKG 232 Query: 234 DTEWYNIVS 242 I Sbjct: 233 SDLKAKINK 241 >gi|239833356|ref|ZP_04681684.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] gi|239821419|gb|EEQ92988.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] Length = 279 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 77/229 (33%), Gaps = 11/229 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L IK G LK ++ F V + GFD A++ + P I Sbjct: 44 QADDLEKIKASGELKIAMSGQYPPFNFVNEKNEVVGFDASIGSAIAERMKLKPQLIT--- 100 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L++ + D + + T RE + F Y G+ + + + + Sbjct: 101 TAWDGIVAGLRAGKFDTVVGSMTITPEREK--AVDFVGPYYHAGRAVFVKEDSAVQKLDD 158 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA-YTGDISAL 201 L G ++ V G T E + + ++ + E+ + R DA +I + Sbjct: 159 LKGKTLGVTLGETHEKWARE-----QGGWTIRTYKGLPELMLELNSGRVDAIVVDNIPVM 213 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A+K T + + + AI + + E + ++ Sbjct: 214 VAIKETGQKVRKLDTPNIEGGSVAIGIAIRKNNPELKAAMQKALDEIMA 262 >gi|229084061|ref|ZP_04216354.1| Extracellular solute-binding protein family 3 [Bacillus cereus Rock3-44] gi|228699238|gb|EEL51930.1| Extracellular solute-binding protein family 3 [Bacillus cereus Rock3-44] Length = 265 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 74/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + N L IKK G + G F Sbjct: 1 MKKLFSVLAVATLAVGIVAGCGKEEKKDTANQDALQQIKKSGEIVVGTEGTYPPFTFHDG 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 +G GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 SGKLTGFDVELTEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K +S + + G Q+ T+ AD K + K Sbjct: 116 QKKYDFSKPYISSSAALVVAKDKDKPASFTDIKGMK-AAQSLTS---NYADIAKKNGAKI 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + + R D +T + L + + I+ S Sbjct: 172 EGVE--GFSQAVELLNSGRVD-FTINDKLSVLNYLQTKKDANIKIVDTEKEASQSGFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G V Sbjct: 229 KGSDTLVQEVDKAL 242 >gi|77456472|ref|YP_345977.1| cystine transporter subunit [Pseudomonas fluorescens Pf0-1] gi|77380475|gb|ABA71988.1| Diaminopimelate-binding protein / L-cystine-binding protein [Pseudomonas fluorescens Pf0-1] Length = 266 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 46/229 (20%), Positives = 80/229 (34%), Gaps = 16/229 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + L IK +G + G+ F+ V A+G GF+V+ AL+ + + Sbjct: 27 AVAGEQLQQIKDKGVINVGLEGTYPPFSFVDADGKLSGFEVELSEALAKKLGVKA---KI 83 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK----KG 136 P AL+SK++D++ + R+ F G ++ K Sbjct: 84 QPTKWDGILAALESKRLDVVVNQVTISEERKK--KYDFSEPYTVSGIQALVLKDKAAALN 141 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I S + LSG + V GT E + +A+ ++ A R DA Sbjct: 142 IKSAADLSGKKVGVGLGTNYEQWV----RANVPGADVRTYDDDPTKFADLNNGRTDAILI 197 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D A + V + S+ A+ +G+ E V+ Sbjct: 198 DRLAALEYAQKAPK---TVAAGEAFSRQEAGIALRKGEPELLAAVNKAL 243 >gi|153010171|ref|YP_001371385.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151562059|gb|ABS15556.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 261 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 77/229 (33%), Gaps = 11/229 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L IK G LK ++ F V + GFD A++ + P I Sbjct: 26 QADDLEKIKASGELKIAMSGQYPPFNFVNEKNEVVGFDASIGSAIAERMQLKPQLIT--- 82 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L++ + D + + T RE + F Y G+ + + + + Sbjct: 83 TAWDGIVAGLRAGKFDTVVGSMTITPEREK--AVDFVGPYYHAGRAVFVKEDSAVQKLDD 140 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA-YTGDISAL 201 L G ++ V G T E + + ++ + E+ + R DA +I + Sbjct: 141 LKGKTLGVTLGETHEKWARE-----QGGWTIRTYKGLPELMLELNSGRVDAIVVDNIPVM 195 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A+K T + + + AI + + E + ++ Sbjct: 196 VAIKETGQKVRKLDTPDIEGGSVAIGIAIRKNNPELKAAMQKALDEIMA 244 >gi|89099280|ref|ZP_01172158.1| hypothetical protein B14911_08355 [Bacillus sp. NRRL B-14911] gi|89086126|gb|EAR65249.1| hypothetical protein B14911_08355 [Bacillus sp. NRRL B-14911] Length = 263 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 91/263 (34%), Gaps = 19/263 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVK-ANG 54 M + I+ + AS G+ G L G + F + A G Sbjct: 1 MLLFLVSILAAGILAACGASEQPASSGGEAGDSGSDDEKVLIMGTSADYPPFEYIDTAKG 60 Query: 55 D-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 D GFDVD AL+ + +Q + AL+S Q+DI+ T R+ Sbjct: 61 DDIIGFDVDLANALAEKLGYK---VQVEDIEFSGLVQALKSGQVDIVLAGMSPTEERKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F I Y + K GI + L G ++ VQ G+ E D + + Sbjct: 117 -NIDFTDIYYTARHMIVTKKDSGIEKLEDLKGKTVGVQLGSIQEGKANDIAEE--IDIKV 173 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII-Q 232 R+ EI R DA + + +N+ + VI + L AI Sbjct: 174 ENRNRIPEIVQELMTGRFDAAIIEDTVATGYFESNEDLNGFVIEDE----EELGSAIALP 229 Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255 D+E + + M + EL Sbjct: 230 KDSELTDDFNKALQEMKDSGELE 252 >gi|300928951|ref|ZP_07144455.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 187-1] gi|300463105|gb|EFK26598.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 187-1] Length = 266 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 86/241 (35%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 14 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + + P +L SK+ID++ + R+ F G Sbjct: 74 LAKHLGVE---VSLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + + L G + V GT E ++ + + ++ Sbjct: 129 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242 Query: 245 H 245 Sbjct: 243 I 243 >gi|300741910|ref|ZP_07071931.1| glutamate-binding protein [Rothia dentocariosa M567] gi|311111806|ref|YP_003983028.1| amino acid ABC transporter binding protein [Rothia dentocariosa ATCC 17931] gi|300381095|gb|EFJ77657.1| glutamate-binding protein [Rothia dentocariosa M567] gi|310943300|gb|ADP39594.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Rothia dentocariosa ATCC 17931] Length = 282 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 88/262 (33%), Gaps = 25/262 (9%) Query: 1 MYKDFFVSILCLII-----------LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49 M K FF T S+ + + ++ GI G Sbjct: 1 MKKSFFNRAATKFFAASTAAALALGFTLTGCSSASDS------KPKIRIGIKYDQPGLGY 54 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 D+ GFDVD R ++ + +I+++ + R L + Q+D++ + Sbjct: 55 QDGQ-DYTGFDVDVARYIAGKLGYSEDQIEFVESPSANRENMLSNGQVDMILATYSISDS 113 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHN 168 R+ + F Y GQ ++ + + L+G ++C G+T+ + D + + Sbjct: 114 RKK--SVDFAGPYYVAGQDLLVRADETSITGPDSLNGKNLCSVTGSTSAKKIQDTYAKN- 170 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + + + A DA T D L L T + ++ + Sbjct: 171 --VNLVKQNSYSDCVVALNGGVVDAVTTDDIILAGLAATKANKGKLKLVGKTFTTEKYGV 228 Query: 229 AIIQGDTEWYNIVSWTHYAMVT 250 + +G + ++ MV Sbjct: 229 GLPKGTDKC-EAINKAINEMVE 249 >gi|302522778|ref|ZP_07275120.1| glutamate binding periplasmic protein [Streptomyces sp. SPB78] gi|302431673|gb|EFL03489.1| glutamate binding periplasmic protein [Streptomyces sp. SPB78] Length = 261 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 84/227 (37%), Gaps = 10/227 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +++ + RG L G E +G + GFD++ + +++ + ++I + Sbjct: 9 DSATWRKARARGRLVVGAKEDQPYLGEKDPASGRYSGFDIEIAKMVAAGLGFPANRISFR 68 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + + R +LQ+ QID R+ +G F Y GQG ++ K GI Sbjct: 69 TIASANRETSLQNGQIDYYVGTYTINDNRKKLVG--FAGPYYMAGQGLLVRKDEDGIKGP 126 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L G +C AG+T + + + ++ ++ DA T D S Sbjct: 127 ADLDGKRVCSAAGSTPYQRIQHDYPKA----DLVSYDTYSICVDNLLTYQVDAVTTDDSI 182 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 L P E ++ S+ P + + D + A Sbjct: 183 LLGYAAKV--PEELKVVGKPFSEEPYGIGVPRKDNALRLAIDGILAA 227 >gi|312862828|ref|ZP_07723068.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus vestibularis F0396] gi|311101688|gb|EFQ59891.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus vestibularis F0396] Length = 279 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 82/252 (32%), Gaps = 14/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M ++ L + ++ +T K +K G + V + +G Sbjct: 1 MKTVLLSCLVILPLFALSACSSRSHFATQKDQWQIYTKEKKIKIGFDATFVPMGYEEKDG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D A+ D +++ ++ + L++ ID++ T R+ Sbjct: 61 SYVGFDIDLATAVFKLYGID---VEWQAIDWDMKETELKNGTIDLIWNGYSVTDERKK-- 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKY 171 F + Q + K GI SV+ +SG ++ QAG++ + Sbjct: 116 SADFTEPYMVNEQVLVTKKSSGIDSVAGMSGKTLGAQAGSSGYDAFNASPKILRDIVANQ 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + + + R D D + ++ ++P A Sbjct: 176 KAVQYSTFTQALIDLDSGRIDGLLIDRVYANYYLEKSGVLDQYNVMPAGYEGESFAVGAR 235 Query: 232 QGDTEWYNIVSW 243 + D ++ Sbjct: 236 KADKTLIKKINQ 247 >gi|170735288|ref|YP_001774402.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|169821326|gb|ACA95907.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 259 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 88/246 (35%), Gaps = 22/246 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + + ++ G F A+G +G + Sbjct: 1 MKKLLQSLCVGAALLGSVAHAEQ-----------VVRVGTLADYAPFEYKDASGKLQGME 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + K Q++ ++ AL++KQID + T RE + F Sbjct: 50 IDIGKKMCDTM---KVKCQWVTMDFDALIPALKAKQIDAVLAQMSKTPERE--QSVDFTR 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I F+ + GI+ + L G +I VQ +T E L A + V++ + Sbjct: 105 IFTTAPVQFVAKQGSGITDGAATLRGKTIGVQTASTHESYLRRRLPAGKSGINVKVYQTL 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +E A R DA D + Y R + I+ + + A A+ +GD Sbjct: 165 DEAWLDLEAGRVDAVLADNTVAYDWLTKAGRKEGFDFVGKPIADAEIFGDGTAIAVRKGD 224 Query: 235 TEWYNI 240 + Sbjct: 225 APLKAL 230 >gi|228995721|ref|ZP_04155384.1| Amino acid ABC transporter, solute binding protein [Bacillus mycoides Rock3-17] gi|228764098|gb|EEM12982.1| Amino acid ABC transporter, solute binding protein [Bacillus mycoides Rock3-17] Length = 271 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 80/253 (31%), Gaps = 21/253 (8%) Query: 1 MYKDFFVSILCLII---LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + + + S S + ++ F + +G Sbjct: 11 MRKKMLTVFAAITLCVSFVLGACSKETSTNEG----KEFRYAMSGLYKPFNFKENDGKLV 66 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDV+ AL+ + P + + L++K+ D++ + T + + Sbjct: 67 GFDVEIGEALAKKMGMKPVPVT---NPWETLIQGLKAKKYDVILGSMAITE--DRLKAVN 121 Query: 118 FRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y G F+ K ISSV L G I V +T + + + Sbjct: 122 FTNPYYRSGAQIFVAKKNNSISSVEDLKGKKIGVVKASTFKTLVE------KHTDQITEY 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + R DA D + L++ + S ++ + AI + D E Sbjct: 176 DSDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLEEMGIAIRKDDKE 233 Query: 237 WYNIVSWTHYAMV 249 V+ ++ Sbjct: 234 MVKKVNKALEEII 246 >gi|156933484|ref|YP_001437400.1| cystine transporter subunit [Cronobacter sakazakii ATCC BAA-894] gi|156531738|gb|ABU76564.1| hypothetical protein ESA_01302 [Cronobacter sakazakii ATCC BAA-894] Length = 266 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 86/254 (33%), Gaps = 20/254 (7%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M V + L+ ++L +K+RG L G+ F+ + Sbjct: 1 MKLALLGRQALMGVMAVALVAGMSVKTYAAENLLNKVKERGTLLVGLEGTYPPFSFQGDD 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+V+F AL+ + P +L SK+ID++ + R+ Sbjct: 61 GKLTGFEVEFAEALAKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K+ I + + L G + V GT E ++ + + Sbjct: 117 -KYDFSTPYTVSGIQALVKKENADSIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGV 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + + S+ AI Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTNNTLAAAGEPFSRQEAGVAIR 229 Query: 232 QGDTEWYNIVSWTH 245 +G+ ++ V Sbjct: 230 KGNDDFVKAVDNAI 243 >gi|254699862|ref|ZP_05161690.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella suis bv. 5 str. 513] Length = 257 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 86/248 (34%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L ++L + + + K+ ++ F + +G GFD Sbjct: 1 MLKSLVLAGLASVVLTVSVQAPVQA-----KEWKEIRIASEGAYPPFNYMSPDGKLVGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ALS A+ +K + + LQ+ + D + + T R+ + F Sbjct: 56 LDIANALSEAM---EAKCTIVANDWDGMIPGLQANKFDAVIASMAITDERKKQVA--FTD 110 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y ++ K I S S +G + QAGTT D + ++ Sbjct: 111 RYYTTPLAVVVPKDSDIVSLEPSAFAGKMVGAQAGTTQGNYADDVYGKAGAD--VKLYPT 168 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E +A + R DA D + S++ +A A+ QGD + Sbjct: 169 ADEANADLESGRLDALAADKFIAADWLKKQGADCCKFLGDIPGSETQIAVALRQGDDDLR 228 Query: 239 NIVSWTHY 246 + Sbjct: 229 EQFNAAIK 236 >gi|229003348|ref|ZP_04161178.1| Amino acid ABC transporter, solute binding protein [Bacillus mycoides Rock1-4] gi|228757966|gb|EEM07181.1| Amino acid ABC transporter, solute binding protein [Bacillus mycoides Rock1-4] Length = 271 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 80/253 (31%), Gaps = 21/253 (8%) Query: 1 MYKDFFVSILCLII---LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + + + S S + ++ F + +G Sbjct: 11 MRKKILTVFAAITLCVSFVLGACSKETSTNEG----KEFRYAMSGLYKPFNFKENDGKLV 66 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDV+ AL+ + P + + L++K+ D++ + T + + Sbjct: 67 GFDVEIGEALAKKMGMKPVPVT---NPWETLIQGLKAKKYDVILGSMAITE--DRLKAVN 121 Query: 118 FRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y G F+ K ISSV L G I V +T + + + Sbjct: 122 FTNPYYRSGAQIFVAKKNNSISSVEDLKGKKIGVVKASTFKTLVE------KHTDQITEY 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + R DA D + L++ + S ++ + AI + D E Sbjct: 176 DSDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLEEMGIAIRKDDKE 233 Query: 237 WYNIVSWTHYAMV 249 V+ ++ Sbjct: 234 MVKKVNKALEEII 246 >gi|229192366|ref|ZP_04319330.1| Arginine-binding extracellular protein artP [Bacillus cereus ATCC 10876] gi|228591146|gb|EEK49001.1| Arginine-binding extracellular protein artP [Bacillus cereus ATCC 10876] Length = 259 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 88/254 (34%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N + L G + + V A+ + G Sbjct: 1 MKKLVSISFALILIVSIFSACSNGESKETKGNKKVLVMGTSADYKPYEYVDASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ + + +R Sbjct: 116 TDIYFVAKNMIVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|284992299|ref|YP_003410853.1| family 3 extracellular solute-binding protein [Geodermatophilus obscurus DSM 43160] gi|284065544|gb|ADB76482.1| extracellular solute-binding protein family 3 [Geodermatophilus obscurus DSM 43160] Length = 296 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 84/225 (37%), Gaps = 10/225 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S + ++ + G + G GF G +GFDV+ + ++ + P +I++ Sbjct: 46 AGSTMAELAEAGTITVGTKFDQPGFGLANPQGVPEGFDVEVTKIIAGELGIAPEEIEWKE 105 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSV 140 + R +Q+ +DI+ R+ + F Y GQ ++ I Sbjct: 106 TVSANRESFIQNGDVDIVVATYTINDARK--QLIDFAGPYYVAGQDIMVATGNPLAIEGP 163 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G +C G+T + D + +F+ + A R + DA T D Sbjct: 164 DDLAGKRVCSVEGSTPAQNIRDNYPEA----QLTLFDVYSKCADALRNGQVDAVTTDNVI 219 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L L ++ + ++ P + +GD E+ ++ T Sbjct: 220 LTGLVQGGQ--GAFELVGNPFTQEPYGIGLTKGDDEFRGFINDTL 262 >gi|306826066|ref|ZP_07459402.1| amino acid ABC superfamily ATP binding cassette transporter solute-binding protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431782|gb|EFM34762.1| amino acid ABC superfamily ATP binding cassette transporter solute-binding protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 268 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 86/260 (33%), Gaps = 16/260 (6%) Query: 3 KDFFVSILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 K +++ L++L F +T + + IK +G L +N F V Sbjct: 5 KKVLMTMFGLLMLPLLFACSNTQSQGVEAIKAKGKLVVALNPEFAPFEYQKLVDGKNQIV 64 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV+ +A++ + + +++ P++ +L S + D+ T R S Sbjct: 65 GSDVELAKAIAKELGVE---VEFSPMSFDNVLASLDSGKADLAISGVSKTEER--SQVYD 119 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K SV L+ + Q G+ E + + Sbjct: 120 FSIPYYTSKNKVIVRKSELTNYQSVKDLAQKKVGAQKGSIQETLAKETL----QNASLVS 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + ++ + DA + N + D + A A+ + Sbjct: 176 LPKNGNLITDLKSGQLDAVIFEEPVAKGFVENNPDLAIAEFDFDNDKEDSYAVAMKKDSK 235 Query: 236 EWYNIVSWTHYAMVTAEELG 255 E V T + + EL Sbjct: 236 ELKEAVDKTIQKLKDSGELE 255 >gi|238796471|ref|ZP_04639979.1| Extracellular solute-binding protein family 3 [Yersinia mollaretii ATCC 43969] gi|238719676|gb|EEQ11484.1| Extracellular solute-binding protein family 3 [Yersinia mollaretii ATCC 43969] Length = 262 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 87/254 (34%), Gaps = 19/254 (7%) Query: 1 MYKDFFVSILCLIILF-FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + LI+ S A + I G++ G F + +G+ GF Sbjct: 1 MKKTLAALLTGLILSAPMLSAPVAAQTIETI------SFGVDGGYPPFDVLSPSGEITGF 54 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D AL + +K ++ + AL +++ D + + T R+ + F Sbjct: 55 DIDIANALCDNL---HAKCVFVKQPFESMIAALNARKFDAIIASLSITDERKK--EVDFT 109 Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + K + V+ L G ++ VQ G+ E ++ + + Sbjct: 110 DRYYRSAAQLVARKGSPLLPEVASLKGKTVGVQTGSIHETYAKKHWS--GQGVKIVSYAN 167 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGD 234 + + + R +A D + + R + +I + A+ + + Sbjct: 168 QDNVYLDLLSGRINASLQDNIQAASSFIDTPRGQKFAFAGPVIQDETISSDVGIAVGKEN 227 Query: 235 TEWYNIVSWTHYAM 248 + ++ A+ Sbjct: 228 PALRDALNGAIKAI 241 >gi|225853737|ref|YP_002735249.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae JJA] gi|225722793|gb|ACO18646.1| ABC transporter solute-binding protein - amino acid transport [Streptococcus pneumoniae JJA] Length = 268 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 86/261 (32%), Gaps = 15/261 (5%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 4 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R Sbjct: 64 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118 Query: 117 AFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K + SV+ L+ + Q G+ E D + Sbjct: 119 DFSIPYYTAKNKLIVKKSDLVTYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + + A+ + Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYSVAMKKDS 234 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 E V T + + EL Sbjct: 235 KELKEAVDKTIQKLKESGELD 255 >gi|218905290|ref|YP_002453124.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH820] gi|228947871|ref|ZP_04110158.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229123674|ref|ZP_04252869.1| Arginine-binding extracellular protein artP [Bacillus cereus 95/8201] gi|218540193|gb|ACK92591.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH820] gi|228659809|gb|EEL15454.1| Arginine-binding extracellular protein artP [Bacillus cereus 95/8201] gi|228811858|gb|EEM58192.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 259 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 91/254 (35%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S + ++I+ S +N K + L G + + V+A+ + G Sbjct: 1 MKKLLSISFVLILIVSMFSACSNGEEKATGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFKVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|228477553|ref|ZP_04062186.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] gi|228250697|gb|EEK09895.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] Length = 283 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 84/256 (32%), Gaps = 18/256 (7%) Query: 1 MYKD----FFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAEV 50 M K ++ L + ++ +T K +K G + V Sbjct: 1 MKKIVKTILLGCLVILPLFALSACSSRSHFATQKDQWQTYTKEKKIKIGFDATFVPMGYE 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + +G + GFD+D A+ D +++ ++ + L++ ID++ T R Sbjct: 61 EKDGSYVGFDIDLATAVFKLYGID---VEWQAIDWDMKETELKNGTIDLIWNGYSVTDER 117 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM- 169 + F + Q + K GI SV+ ++G ++ QAG++ K Sbjct: 118 K--QSADFTVPYMVNEQVLVTKKSSGIDSVAGMAGKTLGAQAGSSGYDAFNASPKILKDI 175 Query: 170 --KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + + + R D D + +++ ++P A Sbjct: 176 VANQKAVQYSTFTQALIDLDSGRIDGLLIDRVYANYYLEKSGVLNQYNVMPAGYEGESFA 235 Query: 228 PAIIQGDTEWYNIVSW 243 + D ++ Sbjct: 236 VGARKADKTLIKKINQ 251 >gi|148985460|ref|ZP_01818665.1| hypothetical protein CGSSp3BS71_08436 [Streptococcus pneumoniae SP3-BS71] gi|147922418|gb|EDK73538.1| hypothetical protein CGSSp3BS71_08436 [Streptococcus pneumoniae SP3-BS71] gi|301799279|emb|CBW31802.1| putative extracellular amino acid-binding protein [Streptococcus pneumoniae OXC141] Length = 268 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 15/261 (5%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ + IK +G L +N F V Sbjct: 4 MKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R Sbjct: 64 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 119 DFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQNGSIQETMAKDLL----QNSSLV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 E V T + + EL Sbjct: 235 KELKEAVDKTIQKLKKSGELD 255 >gi|82776400|ref|YP_402749.1| cystine transporter subunit [Shigella dysenteriae Sd197] gi|81240548|gb|ABB61258.1| putative periplasmic binding transport protein [Shigella dysenteriae Sd197] Length = 266 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 92/254 (36%), Gaps = 20/254 (7%) Query: 1 MY-----KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M + + ++ + ++ S + A +L +K+RG L G+ F+ + Sbjct: 1 MKLAHLGRQALIGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDD 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+V+F + L+ + + P +L SK+ID++ + R+ Sbjct: 61 GKLTGFEVEFAQQLAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I + + L G + V GT E ++ + + Sbjct: 117 -KYDFSTPYTISGIQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGV 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + ++ S+ A+ Sbjct: 172 DVRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEVFSRQESGVALR 229 Query: 232 QGDTEWYNIVSWTH 245 +G+ + V+ Sbjct: 230 KGNEDLLKAVNDAI 243 >gi|116628192|ref|YP_820811.1| amino acid ABC transporter periplasmic protein [Streptococcus thermophilus LMD-9] gi|116101469|gb|ABJ66615.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus thermophilus LMD-9] Length = 265 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 36/261 (13%), Positives = 76/261 (29%), Gaps = 15/261 (5%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K F ++ L + IK+ + + F V Sbjct: 1 MKKFWFMLTALVATCFLVACRGSQGVSTKTIKENKKIVVATESEFAPFEFKSLVNGKDTL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+ + +++ ++ ++QS + DI T R+ Sbjct: 61 VGADIELAKAIGKKLGVK---VEFSVMSFDNVLASVQSGKADIAIAGISVTDERKKV--Y 115 Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K +S L+ ++ Q G+ E F + Sbjct: 116 DFSDSYYTSENVVIVKKDKVNDFTSADSLAKQTVGTQKGSVQETIAKKQFSKA----SVV 171 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E+ ++ + A + + ND + S A AI +G Sbjct: 172 SLASNGEMINELKSGQIQAVVLEKAIAEGYIAQNDDLTLASFNLKSDSSDAYAVAIRKGS 231 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + ++ + + Sbjct: 232 DDLLKEINAVIKETKESGKFD 252 >gi|302551504|ref|ZP_07303846.1| sugar-binding protein [Streptomyces viridochromogenes DSM 40736] gi|302469122|gb|EFL32215.1| sugar-binding protein [Streptomyces viridochromogenes DSM 40736] Length = 356 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 81/242 (33%), Gaps = 17/242 (7%) Query: 16 FFTSFSTNASILGDIKKR----GFLKCGINTGLVGFAEVKANG----DWKGFDVDFCRAL 67 + S + + IK R L G++ + N + +GFD+D + Sbjct: 79 TLSPSSADGDTIKAIKNREGEKRKLIVGVDQNSYRWGYRDPNSGRTAELEGFDIDLVHRI 138 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + I DP +Q+ + +R A+Q ++D++ R + +AF + GQ Sbjct: 139 AEDILGDPDAVQFKAIPTDQRIPAIQDGRVDMVVRTMTINC--DRIKDVAFSAPYFKTGQ 196 Query: 128 GFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPI---VFERVEEID 183 + K I L+G IC AG+T TL + K + + Sbjct: 197 QVLAPKSSPIKGYDDTLAGRRICTAAGSTAYSTLEEDQKDGTLPATTDISGTVPNQLDCL 256 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + DA D + + + + D + A+ + + V+ Sbjct: 257 VRLQLGEADAVVTDGALAASQAAQDP---TVQLKGDAFTAEYYGVAMKKDADDLVRRVNQ 313 Query: 244 TH 245 Sbjct: 314 IL 315 >gi|115359035|ref|YP_776173.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115284323|gb|ABI89839.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 259 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 88/246 (35%), Gaps = 22/246 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + + ++ G F A+G +G + Sbjct: 1 MKKLLQSLCVGAALLGSVAHAEQ-----------VVRVGTLADYAPFEYKDASGKLQGME 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + K Q++ ++ AL++KQID + T RE + F Sbjct: 50 IDIGKKMCDTM---KVKCQWVTMDFDALIPALKAKQIDAVLAQMSKTPERE--QSVDFTR 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I F+ + G++ + L G +I VQ +T E L A + V++ + Sbjct: 105 IFTTAPVQFVAKQGSGVTDNAATLRGKTIGVQTASTHESYLRRRLPASKSGINVKVYQTL 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +E A R DA D + Y R + I+ + + A A+ +GD Sbjct: 165 DEAWLDLEAGRVDAVFADNTVAYDWLTKAGRKEGFDFVGKPIADAEIFGDGTAIAVRKGD 224 Query: 235 TEWYNI 240 + Sbjct: 225 APLKAL 230 >gi|253990333|ref|YP_003041689.1| arginine-binding periplasmic protein 1 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781783|emb|CAQ84946.1| arginine-binding periplasmic protein 1 [Photorhabdus asymbiotica] Length = 244 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 96/252 (38%), Gaps = 23/252 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++L + L T+ ++ ++ F + AN +GFD Sbjct: 1 MKKLLFATLLGTVTLSATAT-----------EKETIRFATEATYPPFEFIDANNQIQGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + I + + + +L+ ++ D L+ D T R+ + F Sbjct: 50 IDLANALCTKI---NATCTFTNQSFDSLIPSLKFRRFDALAAGMDITPERQK--QVDFTD 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K ISSV++L G + +Q GTT + L + K + ++ + Sbjct: 105 TYYDNSAVFIAIKG-KISSVAELKGKQVGIQNGTTHQKYLIEQQKE----IKTVPYDSYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD +A+ ND + + L A+ +G+ E Sbjct: 160 NAILDLKNGRLDAIFGDTAAINEWLKKNDNLETVGNKVTDPNYFGIGLGFAVRKGNKELQ 219 Query: 239 NIVSWTHYAMVT 250 N ++ + Sbjct: 220 NKLNKALTDIKQ 231 >gi|239624576|ref|ZP_04667607.1| polar amino acid ABC transporter [Clostridiales bacterium 1_7_47_FAA] gi|239520962|gb|EEQ60828.1| polar amino acid ABC transporter [Clostridiales bacterium 1_7_47FAA] Length = 299 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 76/212 (35%), Gaps = 8/212 (3%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G L G + + +G++ GFD++ + ++ + + P+ + + L+ Sbjct: 70 GTLIVGFDQDFPPMGFIGDDGEFTGFDLELAQEVAKRLGLEYKP---QPIAWDAKDMELE 126 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 + ID + T + A+ + Q F++ K GI+S + L+G + Q Sbjct: 127 AGNIDCIWNGFTMTGRED---DYAWTDAYMANTQVFVVAKDSGIASQADLAGKVVECQVD 183 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 ++ E L + + DA D + A R ++ Sbjct: 184 SSAEAALKEVPDLTATFKDLLTTADYNTAFMDLEQGAVDAIAMD--VIVAGYQIQQRNAD 241 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 VIL D +S + +TE + V T Sbjct: 242 FVILDDSLSAEEYGVGFKKDNTELRDKVQKTL 273 >gi|330466435|ref|YP_004404178.1| extracellular solute-binding protein family 3 [Verrucosispora maris AB-18-032] gi|328809406|gb|AEB43578.1| extracellular solute-binding protein family 3 [Verrucosispora maris AB-18-032] Length = 282 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 82/232 (35%), Gaps = 7/232 (3%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 S + I+G + + L G+ G + ++GFD++ + ++ + D Sbjct: 24 AGSGTGATGIVGKAESQKKLVIGVKADQPGLGLQTGS-QYEGFDIEIGKIIAKGLGVDAG 82 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 I++ + R ++ +D++ R+ + F Y GQ ++ Sbjct: 83 NIEWKTTVSANREPFIEQGTVDLVVATYTINDERK--QKINFAGPYYIAGQDLLVKSDST 140 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+ QL+G ++C +G+T + + + F+ + + DA T Sbjct: 141 ITGPDQLAGKTVCSVSGSTPAKRIQE----NYPDARLQQFDSYSKCLPLLDGGQVDAVTT 196 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 D L + + ++ S P + + DT V+ A Sbjct: 197 DDIILAGYAAQDQYAGKFKVVGSTFSDEPYGIGLKKDDTTGCEKVNEILKAA 248 >gi|229180434|ref|ZP_04307777.1| Arginine-binding extracellular protein artP [Bacillus cereus 172560W] gi|228603181|gb|EEK60659.1| Arginine-binding extracellular protein artP [Bacillus cereus 172560W] Length = 259 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 91/258 (35%), Gaps = 13/258 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N + L G + + V A+ + G Sbjct: 1 MKKLVSISFALILIVSIFSACSNGESKETKGNKKVLVMGTSADYKPYEYVDASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E +++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKASEF--KKQVDFQVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII-QGDTEW 237 + EI +A R DA + + + + + + AI +++ Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMK---DLQGIEIKEAPEEVGAAIALPKNSDK 230 Query: 238 YNIVSWTHYAMVTAEELG 255 + M + E+ Sbjct: 231 TAEFNKVIKKMQESGEMD 248 >gi|37522352|ref|NP_925729.1| glutamine-binding protein [Gloeobacter violaceus PCC 7421] gi|35213352|dbj|BAC90724.1| glutamine-binding protein [Gloeobacter violaceus PCC 7421] Length = 260 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 96/244 (39%), Gaps = 11/244 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++L + +L A+ L I +R +L G+ L G+ GF+ Sbjct: 1 MPAALRTAVLTVSLLALLQTVGAAAPLEAILQRRYLIVGVKENLYPLGFRDKRGELAGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D R + A+F DP+ ++ +P+ ++R AL+ + +D++ N + R + F Sbjct: 61 IDLARQFAEALFADPTAVKLVPVRNRDRLEALEKQHVDLVIANLSIGVPRAR--AVDFSF 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Q ++ ++ + ++S L + V +G++ E + + + + Sbjct: 119 PYLTVNQAVLLKRESTLRTLSDLERVRLAVLSGSSNERAIRAFLPGAG----LVPVASYQ 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWY 238 E A R D + D + L + +L + S L+ A+ + + Sbjct: 175 EGVQALETGRADGFAADGTVLGGWVQ---DRPAYRLLSTELDTSGLSVAMPRGLQNDSLR 231 Query: 239 NIVS 242 V+ Sbjct: 232 RWVN 235 >gi|24379607|ref|NP_721562.1| putative ABC transporter, glutamine binding protein [Streptococcus mutans UA159] gi|290580393|ref|YP_003484785.1| putative ABC transporter glutamine binding protein [Streptococcus mutans NN2025] gi|24377556|gb|AAN58868.1|AE014954_7 putative ABC transporter, glutamine binding protein [Streptococcus mutans UA159] gi|254997292|dbj|BAH87893.1| putative ABC transporter glutamine binding protein [Streptococcus mutans NN2025] Length = 277 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 84/252 (33%), Gaps = 12/252 (4%) Query: 2 YKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K I L ++ T+ + + + + + G + V NG Sbjct: 4 KKAVTALITFLAVVTLTACGKKGADSQDNWKKFESKKSVTIGFDNTFVPMGFKDKNGKNV 63 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D A+ + K+++ P+N + L++ +ID++ T RE + ++ Sbjct: 64 GFDIDLANAVFNEYG---IKVKWQPINWDLKETELKNGKIDLIWNGYSKT--RERARKVS 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHPI 174 F + Q + K GI+S + + G ++ Q+G++ K Sbjct: 119 FTKPYMKNDQVLVTKKSSGITSFADMKGKALGAQSGSSGYDAFTANPKILKDIVKDNDAS 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +E + + R + D + I+ + + + + D Sbjct: 179 QYETFTQAFIDLKNDRINGLLIDRVYANYYLKQEKELDNYNIIKGKYASEDFSVGVRKSD 238 Query: 235 TEWYNIVSWTHY 246 V+ Sbjct: 239 KTLKKKVNQAFK 250 >gi|260544753|ref|ZP_05820574.1| amino acid ABC transporter [Brucella abortus NCTC 8038] gi|260756609|ref|ZP_05868957.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 6 str. 870] gi|260760039|ref|ZP_05872387.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 4 str. 292] gi|260763278|ref|ZP_05875610.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 2 str. 86/8/59] gi|260882426|ref|ZP_05894040.1| extracellular solute-binding protein [Brucella abortus bv. 9 str. C68] gi|261216081|ref|ZP_05930362.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 3 str. Tulya] gi|261220464|ref|ZP_05934745.1| extracellular solute-binding protein [Brucella ceti B1/94] gi|261313306|ref|ZP_05952503.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis M163/99/10] gi|261318695|ref|ZP_05957892.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis B2/94] gi|261323127|ref|ZP_05962324.1| extracellular solute-binding protein [Brucella neotomae 5K33] gi|261756834|ref|ZP_06000543.1| amino acid ABC transporter [Brucella sp. F5/99] gi|265985406|ref|ZP_06098141.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13] gi|265986494|ref|ZP_06099051.1| extracellular solute-binding protein [Brucella pinnipedialis M292/94/1] gi|265996186|ref|ZP_06108743.1| extracellular solute-binding protein family 3 [Brucella ceti M490/95/1] gi|260098024|gb|EEW81898.1| amino acid ABC transporter [Brucella abortus NCTC 8038] gi|260670357|gb|EEX57297.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 4 str. 292] gi|260673699|gb|EEX60520.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 2 str. 86/8/59] gi|260676717|gb|EEX63538.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 6 str. 870] gi|260871954|gb|EEX79023.1| extracellular solute-binding protein [Brucella abortus bv. 9 str. C68] gi|260917688|gb|EEX84549.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 3 str. Tulya] gi|260919048|gb|EEX85701.1| extracellular solute-binding protein [Brucella ceti B1/94] gi|261297918|gb|EEY01415.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis B2/94] gi|261299107|gb|EEY02604.1| extracellular solute-binding protein [Brucella neotomae 5K33] gi|261302332|gb|EEY05829.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis M163/99/10] gi|261736818|gb|EEY24814.1| amino acid ABC transporter [Brucella sp. F5/99] gi|262550483|gb|EEZ06644.1| extracellular solute-binding protein family 3 [Brucella ceti M490/95/1] gi|264658691|gb|EEZ28952.1| extracellular solute-binding protein [Brucella pinnipedialis M292/94/1] gi|264663998|gb|EEZ34259.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13] Length = 256 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 80/248 (32%), Gaps = 15/248 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +++ A K+ ++ F + +G GFD Sbjct: 1 MKSLVLAGLASVVLTVSVQAPVQA------KEWKEIRIASEGAYPPFNYMSPDGKLVGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL A+ +K + + LQ+ + D + + T R+ + F Sbjct: 55 LDIANALCEAM---EAKCTIVANDWDGMIPGLQANKFDAVIASMAITDERKKQVA--FTD 109 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y ++ K I S S +G + QAGTT D + ++ Sbjct: 110 RYYTTPLAVVVPKDSDIVSLEPSAFAGKMVGAQAGTTQGNYADDVYGKAGAD--VKLYPT 167 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E +A + R DA D + S++ +A A+ QGD + Sbjct: 168 ADEANADLESGRLDALAADKFIAADWLKKQGADCCKFLGDIPGSETQIAVALRQGDDDLR 227 Query: 239 NIVSWTHY 246 + Sbjct: 228 EQFNAAIK 235 >gi|228477051|ref|ZP_04061689.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] gi|228251070|gb|EEK10241.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] Length = 265 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 33/261 (12%), Positives = 73/261 (27%), Gaps = 15/261 (5%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K F ++ L + IK++ + + F V Sbjct: 1 MKKFWFILTALVATCFLVACSGSQGVSPKTIKEKKKIVVATESEFAPFEFKSLVNGKDTL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+ + +++ ++ +QS + DI T R+ Sbjct: 61 VGADIELAKAIGEKLGVK---VEFSVMSFDNVLANVQSGKADIAIAGISVTDERKKV--Y 115 Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K +S L+ ++ Q G+ E + Sbjct: 116 DFSDSYYTSENVVIVKKDKVNDYTSTDSLAKQTVGTQKGSVQETVAKKQIPKA----SVV 171 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E+ ++ + A + + ND + A A +G Sbjct: 172 SLASNGEMINELKSGQLQAVVLEKAIAEGYIAQNDDLTLANFNLKSDGTDAYAVATRKGS 231 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + ++ + + Sbjct: 232 DDLLKEINAVIKETKDSGKFD 252 >gi|228987346|ref|ZP_04147466.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229157735|ref|ZP_04285810.1| Arginine-binding extracellular protein artP [Bacillus cereus ATCC 4342] gi|229198283|ref|ZP_04324990.1| Arginine-binding extracellular protein artP [Bacillus cereus m1293] gi|228585162|gb|EEK43273.1| Arginine-binding extracellular protein artP [Bacillus cereus m1293] gi|228625692|gb|EEK82444.1| Arginine-binding extracellular protein artP [Bacillus cereus ATCC 4342] gi|228772318|gb|EEM20764.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 259 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N K + L G + + V+A+ + G Sbjct: 1 MKKLLSISFALILIVSMFSACSNGEEKATGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I S+ L G + VQ G+ E A++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSIEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFKVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|322831658|ref|YP_004211685.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] gi|321166859|gb|ADW72558.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] Length = 263 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 92/245 (37%), Gaps = 11/245 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + S A L DI+KRG L+ + F V + +G+D Sbjct: 3 MNKRLL-AWAGAAMLVLQASSVMADQLQDIQKRGVLRVAVPQDFPPFGSVSKDLQPEGYD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ + K+Q +P+ + R LQ+ ++D++ + RE + F Sbjct: 62 IDMAHYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKV--IDFSN 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G + +S + +LSG +I V G +L L +E Sbjct: 117 AYAPFFLGVFGAQGDKLSDLKELSGKTIGVTRGAVEDLALTGVAPK---DAKIQRYEDNN 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +AY + + + + A+ P++ + ++ SP + + + + Sbjct: 174 TTLSAYLSGQVEYIATGNLVVAAIARM--NPAKAPVSKVMLKDSPCYVGLRKDEPALKDK 231 Query: 241 VSWTH 245 V+ Sbjct: 232 VNELI 236 >gi|30264229|ref|NP_846606.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Ames] gi|47529672|ref|YP_021021.1| amino acid ABC transporter amino acid-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49187057|ref|YP_030309.1| amino acid ABC transporter amino acid-binding protein [Bacillus anthracis str. Sterne] gi|49480914|ref|YP_038217.1| amino acid ABC transporter amino acid-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|167633720|ref|ZP_02392044.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0442] gi|170687301|ref|ZP_02878519.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0465] gi|190565746|ref|ZP_03018665.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis Tsiankovskii-I] gi|196035047|ref|ZP_03102454.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus W] gi|196042412|ref|ZP_03109674.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus NVH0597-99] gi|227816930|ref|YP_002816939.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. CDC 684] gi|228916791|ref|ZP_04080356.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929201|ref|ZP_04092228.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229602720|ref|YP_002868449.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0248] gi|254683919|ref|ZP_05147779.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. CNEVA-9066] gi|254721754|ref|ZP_05183543.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A1055] gi|254736267|ref|ZP_05193973.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Western North America USA6153] gi|254744156|ref|ZP_05201839.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Kruger B] gi|254754061|ref|ZP_05206096.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Vollum] gi|254758246|ref|ZP_05210273.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Australia 94] gi|30258874|gb|AAP28092.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Ames] gi|47504820|gb|AAT33496.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49180984|gb|AAT56360.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Sterne] gi|49332470|gb|AAT63116.1| amino acid ABC transporter, amino acid-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|167531126|gb|EDR93813.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0442] gi|170668918|gb|EDT19663.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0465] gi|190562665|gb|EDV16631.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis Tsiankovskii-I] gi|195992586|gb|EDX56547.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus W] gi|196026758|gb|EDX65403.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus NVH0597-99] gi|227007028|gb|ACP16771.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. CDC 684] gi|228830491|gb|EEM76101.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842978|gb|EEM88061.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229267128|gb|ACQ48765.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0248] Length = 259 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 90/254 (35%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N K + L G + + V+A+ + G Sbjct: 1 MKKLLSISFALILIVSMFSACSNGEEKATGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFKVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|328956328|ref|YP_004373661.1| amino acid ABC transporter substrate-binding protein, PAAT family [Coriobacterium glomerans PW2] gi|328456652|gb|AEB07846.1| amino acid ABC transporter substrate-binding protein, PAAT family [Coriobacterium glomerans PW2] Length = 282 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 87/256 (33%), Gaps = 17/256 (6%) Query: 1 MYKDFFVSILCLIILFFTS--FSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWK 57 M+ + + L + +S + IK RG LK G+ + G+ + +G ++ Sbjct: 13 MFGMAAIGVAAAGSLVGCGEDSGSGSSKIEAIKSRGKLKAGVKKDVPGYGYLDPASGKYE 72 Query: 58 GFDVDFCRALSSAIF-------DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G ++D C +++++ +++ + K R + + +DI+ T R Sbjct: 73 GMEIDLCYQVAASVLEVSYEEAKQKDLVEFKDVTPKTRGPLIDNDNLDIICATYTITDTR 132 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + F D G ++ K G+ + L G I V G+ T+ + Sbjct: 133 KE--SYDFSEPYRTDYVGMMVKKSSGMEDLDDLDGKVIGVSQGSDTKAAITKMLADQKAD 190 Query: 171 YHP--IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 P F + +A A D + D S LK D E + Sbjct: 191 AKPTYQEFPDYPSLKSALDAGNVDVFAMDRS---TLKNYMDDSVELLREDIKFGPQEYGI 247 Query: 229 AIIQGDTEWYNIVSWT 244 A +G + Sbjct: 248 ASKKGSDLSPVVAKTV 263 >gi|302542073|ref|ZP_07294415.1| glutamate-binding protein [Streptomyces hygroscopicus ATCC 53653] gi|302459691|gb|EFL22784.1| glutamate-binding protein [Streptomyces himastatinicus ATCC 53653] Length = 302 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 36/224 (16%), Positives = 77/224 (34%), Gaps = 9/224 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 ++ L +KRG + G V G GFD++ + +++ + KI + Sbjct: 53 DSPTLKAAQKRGKIVIGAKADQPFLGFVDTEGKRSGFDIEIAKMVAADLGFSADKITFKT 112 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 +++ R ++ Q+D R+ +G F Y G ++ K + + Sbjct: 113 VDSNVRETSISKGQVDYYVGTYTINDERKKQVG--FAGPYYQAGADLLVRKDEKGITGPD 170 Query: 143 -LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + G IC G+T + + + DA T D + L Sbjct: 171 SVKGKKICSIVGSTPLQEIKKP----KYGAKTTELSKYSLCVKQLLDGQVDAVTTDDAIL 226 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 RPS+ ++ ++ P + + D + ++ + Sbjct: 227 KGYAAQ--RPSKLKLVEKPFTEEPYGVGMNKNDKVLRDAITDSL 268 >gi|307129014|ref|YP_003881030.1| cystine ABC transporter periplasmic-binding component [Dickeya dadantii 3937] gi|306526543|gb|ADM96473.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Dickeya dadantii 3937] Length = 257 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 80/246 (32%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++L +L ++ + L IK G +K G + A+G GFD Sbjct: 1 MMKKSRLALLTGALLVTSALAQAQDDLSAIKAAGVIKFGTEGTYAPYTYHDASGKLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RA++ + ++ + +K+ D + T R F Sbjct: 61 VDVGRAVAEKLGVKAE---FVEGRWDGLIAGVDAKRYDAVINQVGVTKERRA--KYDFTK 115 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ GI S + L G Q+ T+ LA + A + + Sbjct: 116 PYIDAKSVLIVRGDNTGIKSFNDLKGHKSA-QSLTSNYSKLATSYGA-----EIVPTDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R +A D + K ++ S P A + + + + Sbjct: 170 NQSLELVLSGRAEATLNDNLSFLDFKKHKPDA-NVKVVATAESGDPSAILVRKNQPQLVD 228 Query: 240 IVSWTH 245 ++ Sbjct: 229 ALNNAL 234 >gi|227544221|ref|ZP_03974270.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri CF48-3A] gi|227185792|gb|EEI65863.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri CF48-3A] Length = 256 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 82/226 (36%), Gaps = 9/226 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + I++R + G++ V + NG G+DVD RA+ K+ + Sbjct: 36 ADTQDTWNRIERRKRVIVGLDDSFVPMDFRQKNGKLVGYDVDLARAVFKQYG---IKVDF 92 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P++ + L++ ID+L R +AF + Q + KK I ++ Sbjct: 93 QPIDWSMKETELKNGTIDLLWNGYSVNPSRAK--KVAFSRYYLENRQILVTKKKSNIKNL 150 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYH---PIVFERVEEIDAAYRAHRCDAYTGD 197 + ++G ++ VQ G+T L + K K P++++ A+R D Sbjct: 151 NGMTGKTLGVQNGSTGVTVLDEKPKLLKDKIKHHTPVLYDTFPNAFIDLNANRIQGILMD 210 Query: 198 ISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVS 242 + + + + A + +GD ++ Sbjct: 211 EVYANYYIKHQPNSNSYRTYISKELPMEHFAVGMRKGDKTLKKKIN 256 >gi|225023167|ref|ZP_03712359.1| hypothetical protein EIKCOROL_00019 [Eikenella corrodens ATCC 23834] gi|224943991|gb|EEG25200.1| hypothetical protein EIKCOROL_00019 [Eikenella corrodens ATCC 23834] Length = 276 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 87/268 (32%), Gaps = 20/268 (7%) Query: 1 MYKDFFVSILCLIILFFTSF----STNASILGDIKKRG--------FLKCGINTGLVGFA 48 M K ++ C I + AS D G L+ N F Sbjct: 3 MKKWLATALACSAIALSGCGNSGGTQQASQPADANASGASAPSSEKVLRVATNAEFAPFE 62 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 +G GFD+D AL+ ++++ + F +L++ D++ T Sbjct: 63 SKNPDGSLSGFDIDLINALAKEAGY---RVEFKDQSWDSLFNSLRNGDADVVVAAVTITP 119 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAH 167 R + F + Q + + K ++SV L + V G T +L + A Sbjct: 120 ER--QQSMLFTDPYFEITQVVAVPEGKQVASVEDLKNLNRVGVVTGNTGDLAASKLLGAT 177 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 N FE + + + DA D S + N +I Sbjct: 178 N--PKVTRFESLPLLLKELQNGGVDAAVSDSSVVMEFIKHNGDKGFTMIKVPDFEAEHYG 235 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ Q DTE + ++ A+ + E Sbjct: 236 IALRQDDTELRDTLNKALAAIKASGEYD 263 >gi|226330763|ref|ZP_03806281.1| hypothetical protein PROPEN_04683 [Proteus penneri ATCC 35198] gi|225201558|gb|EEG83912.1| hypothetical protein PROPEN_04683 [Proteus penneri ATCC 35198] Length = 244 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 92/249 (36%), Gaps = 27/249 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++L I L T+ ++ ++ F + AN GFD Sbjct: 1 MKKILFAALLTSITLSATAA-----------EKETIRFATEATYPPFEMIDANNQIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + I D + + +L+ ++ + L D T R+ + F Sbjct: 50 VDLANAMCAKINAD---CTFTNQSFDSLIPSLKFRRFEALMAGIDITPERQK--QVDFTD 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K IS V+ L G I VQ GTT + + + K + ++ + Sbjct: 105 SYYDNSAVFITVKG-KISDVANLKGKQIGVQNGTTHQKFINEQHKE----MKTVPYDSYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R +A GD + + P ++ + + LA A+ +G+ + Sbjct: 160 NAVLDLKNGRIEAIFGDTAVVNEWL--KKNPELGIVGDKVADPNYFGTGLAIAVRKGNAD 217 Query: 237 WYNIVSWTH 245 + ++ Sbjct: 218 LQDKLNKAL 226 >gi|260568086|ref|ZP_05838555.1| amino acid ABC transporter [Brucella suis bv. 4 str. 40] gi|260154751|gb|EEW89832.1| amino acid ABC transporter [Brucella suis bv. 4 str. 40] Length = 256 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 81/248 (32%), Gaps = 15/248 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +++ A K+ ++ F + +G GFD Sbjct: 1 MKSLVLAGLASVVLTVSIQAPVQA------KEWKEIRIASEGAYPPFNYMSPDGKLVGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL A+ +K + + +LQ+ + D + + T R+ + F Sbjct: 55 LDIANALCEAM---EAKCTIVANDWDGMIPSLQANKFDAVIASMAITDERKKQVA--FTD 109 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y ++ K I S S +G + QAGTT D + ++ Sbjct: 110 RYYTTPLAVVVPKDSDIVSLEPSAFAGKMVGAQAGTTQGNYADDVYGKAGAD--VKLYPT 167 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E +A + R DA D + S++ +A A+ QGD + Sbjct: 168 ADEANADLESGRLDALAADKFIAADWLKKQGADCCKFLGDIPGSETQIAVALRQGDDDLR 227 Query: 239 NIVSWTHY 246 + Sbjct: 228 EQFNAAIK 235 >gi|225018272|ref|ZP_03707464.1| hypothetical protein CLOSTMETH_02210 [Clostridium methylpentosum DSM 5476] gi|224948969|gb|EEG30178.1| hypothetical protein CLOSTMETH_02210 [Clostridium methylpentosum DSM 5476] Length = 263 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 35/248 (14%), Positives = 83/248 (33%), Gaps = 11/248 (4%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++ + + +F +A + K L G++ + + + G Sbjct: 1 MKKLAAILLAGVLALTVFVGCGGKDAGNADNGNKE-TLVVGLDPEFPPMGFKENDDEIVG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D A++ + ++++ P++ + L + + +ID++ T RE L Sbjct: 60 FDIDLANAVAEEMG---VQMKFQPIDWSSKELEIDTGRIDMIWNGFSVTPEREE--ALLL 114 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + K IS V L G + +Q ++ + + + Sbjct: 115 TKPYLNNNMIVVTLKDSAISKVEDLEGKKVVLQKESSALDAFQEAPVSEKV-ADLTQLSS 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R +A D + + IL + + A + +G+ E Sbjct: 174 NVDCFQDLENGRAEAMVVDETVAKYYLNLHKDK--FKILDESLGAEKYAIGLKKGNDELK 231 Query: 239 NIVSWTHY 246 + + Sbjct: 232 DKLEAAIT 239 >gi|23501838|ref|NP_697965.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella suis 1330] gi|161618911|ref|YP_001592798.1| extracellular solute-binding protein [Brucella canis ATCC 23365] gi|163843223|ref|YP_001627627.1| extracellular solute-binding protein [Brucella suis ATCC 23445] gi|254701713|ref|ZP_05163541.1| extracellular solute-binding protein [Brucella suis bv. 5 str. 513] gi|254704255|ref|ZP_05166083.1| extracellular solute-binding protein [Brucella suis bv. 3 str. 686] gi|256369380|ref|YP_003106888.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella microti CCM 4915] gi|23347774|gb|AAN29880.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella suis 1330] gi|161335722|gb|ABX62027.1| extracellular solute-binding protein family 3 [Brucella canis ATCC 23365] gi|163673946|gb|ABY38057.1| extracellular solute-binding protein family 3 [Brucella suis ATCC 23445] gi|255999540|gb|ACU47939.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella microti CCM 4915] Length = 268 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 86/254 (33%), Gaps = 15/254 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +++ + + + A+ + + ++ L G F +K +G GFD Sbjct: 1 MRVLKRIAMATSVAALAITVGSMAAGVANAEEPLKLTIGTEGAYPPFNFIKPDGTLSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RAL + +K +++ + ALQS + D + T R+ + F Sbjct: 61 VDIARALCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFIASMSITDERKK--QVDFTN 115 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G K I + L+G +I VQ TT A+Y + + Sbjct: 116 KYYNTPPGIAAPKDTDIKGVTKEDLAGKTIGVQGSTTH----ANYSEKTYTDSTIKSYPT 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP----AIIQGD 234 EE R DA D L + D ++ P AI +G Sbjct: 172 AEEYRLDLANGRLDAVNDDSVTLAEWLKSPDGACCKMVGTFPPVTEIHGPGAGIAIKKGR 231 Query: 235 TEWYNIVSWTHYAM 248 E + A+ Sbjct: 232 PELVAKFNAAIKAI 245 >gi|298291644|ref|YP_003693583.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296928155|gb|ADH88964.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 254 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 49/224 (21%), Positives = 84/224 (37%), Gaps = 17/224 (7%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +IKK ++ G F V G GFD+D +AL + + ++ + Sbjct: 22 AEIKK---VRIGTEGAYPPFNSVDTTGQLVGFDIDIAKALCEKMKVE---CTFVAQDWDG 75 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--LSG 145 AL +K+ D + + T R+ + F Y F+ K I+ ++ L G Sbjct: 76 IIPALLAKKYDAIVASMSITDERKK--QVDFTIPYYLTPGNFMAPKDTKITDITPAGLKG 133 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 I Q+ TT+ L D +K ++ +E +A A R DA D Y Sbjct: 134 KVIGAQSSTTSASYLEDKYK----GSEAKLYPTQDEANADLAAGRLDAVLVDKFVGYEWL 189 Query: 206 LTNDRPS-EHVILPDIISKSP--LAPAIIQGDTEWYNIVSWTHY 246 D + PD+ +P A+ + DTE +++ Sbjct: 190 EKTDAGKCCKFVGPDLADVNPDGTGIAVRKEDTELREMLNKAIK 233 >gi|238749315|ref|ZP_04610820.1| Extracellular solute-binding protein family 3 [Yersinia rohdei ATCC 43380] gi|238711970|gb|EEQ04183.1| Extracellular solute-binding protein family 3 [Yersinia rohdei ATCC 43380] Length = 257 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 87/253 (34%), Gaps = 22/253 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + LI+ + A + I G++ G F + +G+ GFD Sbjct: 1 MKKTLIALLTGLIL----ATPVAAQTIDTI------SFGVDGGYPPFDVLAPSGEITGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + +K ++ + AL +++ D + + T R+ + F Sbjct: 51 IDIANALCDNL---HAKCVFVKQPFESMIAALNARKFDAIVASLSITDERKK--EVDFTD 105 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K + V+ L G ++ VQ G+ E ++ + + Sbjct: 106 RYYRSSAQLVARKGSPLLPEVASLQGKTVGVQTGSIHEAYAKKHWG--GQGVKIVSYANQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDT 235 + + + R +A D + + R + +I + A+ + + Sbjct: 164 DNVYLDLLSGRINASLQDNIQAASSFIDTPRGQKFAFAGPVIQDETISSDVGIAVGKDNP 223 Query: 236 EWYNIVSWTHYAM 248 + ++ A+ Sbjct: 224 ALRDALNGAIKAI 236 >gi|257461100|ref|ZP_05626198.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257441474|gb|EEV16619.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 267 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 60/243 (24%), Positives = 103/243 (42%), Gaps = 19/243 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L + L ++ L IK++G ++ GI+ F+ V +G + GF+ Sbjct: 1 MKKIILALMLAVCSLL-------SNTLTQIKEKGVIRIGIDGSSPPFS-VAKDGGYSGFE 52 Query: 61 VDFCRALSSAIFDDPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + L IF D KIQY+ +R A+Q ++D+ T RE + F Sbjct: 53 ILLIEGLVKEIFGDKGSKIQYVVTVGDDRIKAVQDNRVDLDIALISVTKEREKL--VDFS 110 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + I VS L+G +I Q GTT + DYF + + Sbjct: 111 DPYFSVNIGVLTRSDDNIRKVSDLNGKTILAQPGTT----VFDYFTKQGY--NVVPCASA 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E ++ + D Y D ++A + + + V + ++ S LA A+ +G+TE N Sbjct: 165 NECFNDLKSGKGDGYGDDNLLVFAYAVVDRK--VEVNIKNLGSTDFLAIAVQKGNTELLN 222 Query: 240 IVS 242 V+ Sbjct: 223 AVN 225 >gi|254719051|ref|ZP_05180862.1| extracellular solute-binding protein [Brucella sp. 83/13] gi|306838979|ref|ZP_07471801.1| extracellular solute-binding protein [Brucella sp. NF 2653] gi|306405946|gb|EFM62203.1| extracellular solute-binding protein [Brucella sp. NF 2653] Length = 268 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 86/254 (33%), Gaps = 15/254 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +++ + + + A+ + + ++ L G F +K +G GFD Sbjct: 1 MRVLKRIAMATSVAALAITVGSMAAGVANAEEPLKLTIGTEGAYPPFNFIKPDGTLSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RAL + +K +++ + ALQS + D + T R+ + F Sbjct: 61 VDIARALCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFIASMSITDERKK--QVDFTN 115 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G K I + L+G +I VQ TT A+Y + + Sbjct: 116 KYYNTPPGIAAPKDTDIKGVTKEDLAGKTIGVQGSTTH----ANYSEKTYTDSTIKSYPT 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP----AIIQGD 234 EE R DA D L + D +I P AI +G Sbjct: 172 AEEYRLDLANGRLDAVNDDSVTLVEWLKSPDGACCKMIGTFPPVTEIHGPGAGIAIKKGR 231 Query: 235 TEWYNIVSWTHYAM 248 E + A+ Sbjct: 232 PELVAKFNAAIKAI 245 >gi|296132382|ref|YP_003639629.1| extracellular solute-binding protein family 3 [Thermincola sp. JR] gi|296030960|gb|ADG81728.1| extracellular solute-binding protein family 3 [Thermincola potens JR] Length = 268 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 42/267 (15%), Positives = 81/267 (30%), Gaps = 25/267 (9%) Query: 2 YKDFFVSILCLIILFFTSFSTNA-----------SILGDIKKRGFLKCGINTGLVGFAEV 50 K F V +L ++ + A IK +G L G F Sbjct: 5 KKLFVVFLLGSMVFLVGCGGSRAVTGEKPVQNTDDSWTKIKNKGELVVGFCAAYPPFESR 64 Query: 51 KANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 + GFDVD RAL++ + ++++ + LQ DIL + Sbjct: 65 DEKTKEFVGFDVDLARALAAEMGVK---VRFIDAEWQGLLGGLQKGDYDILITCMSKSET 121 Query: 110 REISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R + + Y G ++ K I + L G + VQ G+ +E + Sbjct: 122 R--GQNVNMSDVYYRLGDVIVVRKDDNNIRRQNDLQGKIVGVQLGSGSEQLVDKMQGLK- 178 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + E + R DA + + ++ ++++ + Sbjct: 179 ---ETKKYNYNPEAFLDLKNGRIDAVIVG---YAYAVNQIKQDPSYKVVGKPLAEAEIVM 232 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELG 255 + +G V+ + E Sbjct: 233 VMRKGADSLTQKVNEALANLKANGEYD 259 >gi|259046943|ref|ZP_05737344.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Granulicatella adiacens ATCC 49175] gi|259036386|gb|EEW37641.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Granulicatella adiacens ATCC 49175] Length = 282 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 92/258 (35%), Gaps = 17/258 (6%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVK 51 M K ++++ + ++ + AS +++ + G + V + Sbjct: 1 MKKRKGILGLLALVGVAVMTLAGCTQLASNPKVDNWDKYQQQKSITVGFDNTFVPMGFEE 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 NGD+ GFD++ + +S + + + P++ + LQ+ ID + T R Sbjct: 61 KNGDYAGFDIELAQYVSKKLG---ITVHFQPIDWDMKETELQNGTIDAIWNGYSATDER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY---FKAHN 168 +AF + Q ++ K GI S S ++G ++ Q G++ L ++ K Sbjct: 117 -REKVAFTIPYMQNTQILVVKKTSGIHSASDMTGKALGAQNGSSGMLDFEEHPEVLKNRV 175 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 ++ V E + R DA D T E+ +P A Sbjct: 176 KGGDADQYQSVNEAIIDLKNDRIDALLIDRVYADYYLTTEGIADEYDTIPSGFESESFAV 235 Query: 229 AIIQGDTEWYNIVSWTHY 246 + D + ++ Sbjct: 236 GVRPADKKLLEALNEAFK 253 >gi|91777477|ref|YP_552685.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91690137|gb|ABE33335.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 282 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 54/285 (18%), Positives = 101/285 (35%), Gaps = 18/285 (6%) Query: 1 MYKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K S++ + F + + NA L DIK RG + I+ + AN + Sbjct: 1 MSKRRLSSLVLAALFPFGALIHPLAANADTLDDIKSRGTMTVAIDPTFAPYEYTDANNNI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD A++ + I+Y ++ L + D+ + T R L Sbjct: 61 VGFDPAVMDAVARHLGVK---IEYQRMSFSGIIPGLLAHSFDVEGSALNVTSERAKRLAY 117 Query: 117 AFRPITYFDGQGFI---MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK--- 170 P + + K +++ L+G + V++ + E L + + K Sbjct: 118 V-VPTSKTVNGALVRSDFRKIPQPATIESLAGLTAAVKSASAPEQILKQFNETLKAKGLA 176 Query: 171 -YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 I + V++ AA R D D++ L + P + ++ +A A Sbjct: 177 PIQLISVDSVDQTVAALMTRRADFVFDDMTVLAGVIKQ--NPGKLKSTGELGPSQWIAWA 234 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPDV 273 DT +S AM + EL + + N+ T+ + Sbjct: 235 TRPDDTRLNKAISDQILAMKKSGELARLQKANLGVTFDTPTSDFI 279 >gi|55823400|ref|YP_141841.1| ABC transporter substrate-binding protein, amino acid [Streptococcus thermophilus CNRZ1066] gi|55739385|gb|AAV63026.1| ABC transporter substrate-binding protein, amino acid [Streptococcus thermophilus CNRZ1066] Length = 278 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 83/254 (32%), Gaps = 18/254 (7%) Query: 1 MY--KDFFVSILCLIIL-FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANG 54 M K + + + L + S++ + L +K +G L +N F Sbjct: 3 MKPWKKLLLGLAGIFALTSLAACSSSTNTLDKVKIKGTLTVALNPHFAPFEFKTIQDGKD 62 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D++ + + + +++ ++ ++QS + DI T R+ Sbjct: 63 TIAGADIEIAKVIGDELGVK---VKFSEMSFDNVLASVQSGKADIAISGISATKERQKI- 118 Query: 115 GLAFRPITYFDGQGFIMHKK---KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F Y ++ K K +S S SI VQ G+ E KA+ Sbjct: 119 -FDFSDTYYDSETVLLVKKDATEKTYKQISDFSKKSIAVQKGSIQENI----AKANLSDA 173 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + + E ++ + + + + N + I S A A+ Sbjct: 174 NVVSLAQPGEAINELKSGQVEGVVLEKAIAKGYVDQNSDLTMSDIALKSDSNDAYAVAMP 233 Query: 232 QGDTEWYNIVSWTH 245 +G + V+ Sbjct: 234 KGSDDLKAKVNKII 247 >gi|297156741|gb|ADI06453.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces bingchenggensis BCW-1] Length = 290 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 78/223 (34%), Gaps = 7/223 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 ++S L +KRG L G G GFD++ + +++ + +I++ Sbjct: 41 DSSTLKAAQKRGKLIIGAKADQPYLGFEDTTGKRSGFDIEIAKMVAADLGFSEDQIEFKT 100 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 +++ R ++ Q+D R+ +G A P + H +KGI+ Sbjct: 101 VDSNVRETSISKGQVDYYVGTYTINDERKKQVGFA-GPYYVAGADLLVRHDEKGITGADS 159 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 + G +C G+T + + + DA T D + L Sbjct: 160 VKGKKVCSIVGSTPLQEIKKP----KYGAKTTELGKYSLCVKQLLDGQVDAVTTDDAILK 215 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 RPS+ ++ ++ P + + D + +S Sbjct: 216 GYAAQ--RPSKLRVVGKPFTEEPYGIGMNKDDKALRDAISDAL 256 >gi|258404610|ref|YP_003197352.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] gi|257796837|gb|ACV67774.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] Length = 278 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 91/250 (36%), Gaps = 21/250 (8%) Query: 5 FFVSILCLIILFFTSFST-------NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 ++ + +L + S AS L I+KRG L+ G +T +A G++ Sbjct: 10 MIGCVMAVALLGTAAQSADVREALSQASALEQIQKRGNLRVGFST-FKPWAMKNKKGEFI 68 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GF++D +AL++ + +P ++P AL + + DI+ R +L + Sbjct: 69 GFEIDVAKALAADMGVEPE---FVPTKWSGIIPALLTGKFDIIIGGMGIRPQR--NLKVN 123 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHP 173 F G + HK G S+ + +I + GTT + Sbjct: 124 FSVPYDHSGMSIVAHKSVAPGYESLEDFNKPSVTIAARIGTTAAQAAKTHMPEA----TI 179 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +F+ + R A + + + + + P+ AI +G Sbjct: 180 RLFDDEAQALQELLTQRAHAMVASQPLPEQQAILHKERLYLPLDGETFTTEPIGFAIRKG 239 Query: 234 DTEWYNIVSW 243 D ++ N ++ Sbjct: 240 DIDFLNFLNN 249 >gi|239982702|ref|ZP_04705226.1| glutamate binding protein [Streptomyces albus J1074] gi|291454550|ref|ZP_06593940.1| glutamate binding protein [Streptomyces albus J1074] gi|291357499|gb|EFE84401.1| glutamate binding protein [Streptomyces albus J1074] Length = 277 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 76/234 (32%), Gaps = 12/234 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 +K GI G + G + GFDVD ++ + +I++ + +R AL Sbjct: 37 KTIKVGIKFDQPGIGQKTPQGTFTGFDVDVATYVAKELGYTEKQIEFKETPSADRENALS 96 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 ++ ++ + RE + F Q ++ IS +L G ++C AG Sbjct: 97 RGDVEFIAASYSINDEREA--KVDFAGPYLLAHQDLLIRADDKISKAEELDGKTLCSVAG 154 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T+ + + F + E + DA T D S L + Sbjct: 155 STSAQNVKEKFAK---GAQLKEYGTYSECLEGLQTGAVDALTTDDSILAGYASQEQYKGK 211 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY------AMVTAEELGITQKNI 261 + +S + + + + ++ + A E N Sbjct: 212 FKLSGLSLSNENYGIGV-KEGSALKDKINKALEKMVEDGSWDKAVEANFGPANY 264 >gi|152970962|ref|YP_001336071.1| cystine transporter subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895478|ref|YP_002920213.1| cystine transporter subunit [Klebsiella pneumoniae NTUH-K2044] gi|262043452|ref|ZP_06016575.1| amino acid ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|150955811|gb|ABR77841.1| cysteine transport protein (ABC superfamily, peri_bind) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238547795|dbj|BAH64146.1| cysteine transporter periplasmic binding protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259039194|gb|EEW40342.1| amino acid ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 266 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 86/254 (33%), Gaps = 20/254 (7%) Query: 1 MYKDFF---VSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M + + ++ S ++L IK+RG L+ G+ F+ + Sbjct: 1 MKLALLGRQAMMGAMAVVLMAGVSVKTFAAENLLNQIKERGTLRVGLEGTYPPFSFQGDD 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+V+F L+ + P +L SK+ID++ + R+ Sbjct: 61 GKLTGFEVEFANELAKHLGVKAD---LKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I + + L G + V GT E ++ + + Sbjct: 117 -KYDFSTPYTVSGVQALVKKGNEGVIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGV 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + + + S+ A+ Sbjct: 172 DVRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTNNTLAVTGEAFSRQEAGVALR 229 Query: 232 QGDTEWYNIVSWTH 245 +G+ + V Sbjct: 230 KGNDDLLKAVDGAI 243 >gi|320007608|gb|ADW02458.1| extracellular solute-binding protein family 3 [Streptomyces flavogriseus ATCC 33331] Length = 304 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 84/225 (37%), Gaps = 10/225 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + +KRG+L G E G + GFD++ R +++++ +P I++ Sbjct: 52 ESKTWKKAEKRGYLVVGAKEDQPYLGEKDPATGVYSGFDIEIARMMAASLGFEPDTIRFR 111 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + + R ALQ+ QID +R+ +G F Y GQG ++ I Sbjct: 112 TIASANRETALQNGQIDYYVGTYTINDMRKKLVG--FAGPYYMAGQGLLVRTDENDIHGP 169 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G ++C AG+T +A + + ++ + DA T D + Sbjct: 170 QDLAGKTVCSAAGSTPYQRIAADYPEA----DLVAYDTYSICVDNLLTFQVDAVTTDDAI 225 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L P E ++ S+ P + + D + Sbjct: 226 LLGFAAKA--PDEMKVVGKPFSEEPYGIGVPRSDNALRLALDDAL 268 >gi|331002715|ref|ZP_08326230.1| hypothetical protein HMPREF0491_01092 [Lachnospiraceae oral taxon 107 str. F0167] gi|330407128|gb|EGG86632.1| hypothetical protein HMPREF0491_01092 [Lachnospiraceae oral taxon 107 str. F0167] Length = 283 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 98/255 (38%), Gaps = 23/255 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-----------ILGDIKKRGFLKCGINTGLVGFAE 49 M K + +L ++ + S S L +IKK G + G+ + F Sbjct: 1 MKKGKLIGLLGILTAGVLALSACGSSSKQAGKNNFRTLDEIKKSGTINIGVFSDKHPFGY 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V NG+++G+D+ F L+ + I Y+ A R L++ ++DI+ N T Sbjct: 61 VDENGEYQGYDIYFGNRLAEDLGVK---INYVSTEAANRVEYLETGKVDIILANFTVTPE 117 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELTLADYFKAHN 168 R + F G G I +K ++S+ + + + V +GTT E + + Sbjct: 118 RAE--AVDFALPYMNVGLGVISSEKDAVASLDNWNADDEMIVISGTTAEPYMT----KNY 171 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 ++ A A+ D + + A N P V + + +AP Sbjct: 172 PNIKLQKYDTYANAKNALLNGTGKAWVNDNTEVIAFA--NSNPGYVVGIDSLGVNDTIAP 229 Query: 229 AIIQGDTEWYNIVSW 243 A+ +G++ ++ Sbjct: 230 AVTKGNSSLLEWINT 244 >gi|89899831|ref|YP_522302.1| extracellular solute-binding protein [Rhodoferax ferrireducens T118] gi|89344568|gb|ABD68771.1| extracellular solute-binding protein, family 3 [Rhodoferax ferrireducens T118] Length = 265 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 83/249 (33%), Gaps = 10/249 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + I L S A L +IK+R + GI+ F + A G D Sbjct: 1 MIQSKKIISALAIALVAICTSVQADTLANIKQRNKVLVGIDLTFAPFGSMDAAMKPMGSD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V + L+ + + ++ + L R L + ++D++ + T R+ + F Sbjct: 61 VSAAKMLAKDLGVE---LEIVQLTGPNRVPYLLTGKVDMVISSFSITPERKKV--IDFSV 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + K I+ + L+G I + G E L P+ F+ Sbjct: 116 PYSVSESVILAPKSVQITKLQDLAGKRIGLVRGNLQENLLKPIAPE---GMIPVRFDDDA 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + + DA G L + + L I P I + DT N Sbjct: 173 SNVVALLSGQVDALGGSKELLPNIAKQSPEKQVESKLS--IGILPHGIGIRKEDTSLLNW 230 Query: 241 VSWTHYAMV 249 + A + Sbjct: 231 TNQWVMANL 239 >gi|167563743|ref|ZP_02356659.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia oklahomensis EO147] gi|167570891|ref|ZP_02363765.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia oklahomensis C6786] Length = 266 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 82/250 (32%), Gaps = 16/250 (6%) Query: 1 MY--KDFFVSILCLIILF-FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F S + ++ T+ + A +L +K+ G LK + F ++G + Sbjct: 1 MKVLKPMFTSAVVAALVGIATASAHAADLLDSVKQAGVLKIALEGTYPPFDYRNSDGQLE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD +A+++ + P Q++ LQ+ + D++ T R+ L Sbjct: 61 GFDVDVAKAVAARLGVKP---QFVTTEWSGILAGLQAGKFDVIVNQVGITPARK--QALD 115 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + I + L G + V GT AD K Sbjct: 116 FSQPYVYSAAQLIQRADDKHDYGAPGALQGKRLGVTLGT----NFADLAKTL-PGVDVRT 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E A R D D L L P ++ + +G+ Sbjct: 171 YPGAPEKLRDVSAGRIDVSMDDRLMLPYLIKNAHMPLR-PGATVKGGETQMGIPFRKGNP 229 Query: 236 EWYNIVSWTH 245 ++ + Sbjct: 230 KFAKAIDDAL 239 >gi|315283361|ref|ZP_07871572.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria marthii FSL S4-120] gi|313613009|gb|EFR86940.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria marthii FSL S4-120] Length = 486 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 101/279 (36%), Gaps = 24/279 (8%) Query: 1 MYKDFFVSILCLIILF---------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K ++++F + T L I+++G L G++ + Sbjct: 1 MQKHLLQKFAAILLVFIFVFSGFTTVFAADTKDETLTKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F F Q ++ K K +SV+ SG + Q TT E + Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVVRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNEL-- 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 174 --VGSDVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFVNGSKE-T 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 A A+ +G T+ V+ + + L QK N++ Sbjct: 231 AIAMPKGSTDLQAKVNASIKDIQDTGLLKKYQKEANKLM 269 >gi|108810146|ref|YP_654062.1| putative periplasmic solute-binding protein [Yersinia pestis Antiqua] gi|167401600|ref|ZP_02307094.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|108782059|gb|ABG16117.1| putative periplasmic solute-binding protein [Yersinia pestis Antiqua] gi|167048982|gb|EDR60390.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] Length = 253 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 47/222 (21%), Positives = 82/222 (36%), Gaps = 13/222 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + DIK+ G ++ + F + G+DVD A++ + ++ N Sbjct: 1 MDDIKQAGVVRIAVFDSNPPFGYIDPQTKKLVGYDVDVANAIAKDLGVK---VELRATNP 57 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 R L SK++D+++ N T R + F + GQ FI K + + + Sbjct: 58 ANRIPLLASKKVDLIAANFTITDERAK--EVNFSLPYFATGQKFIARKG-VLKTPEDIGK 114 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 I GT E+TL +++ I ++ A R A T D + L L Sbjct: 115 LRIGADKGTVQEITLREHYPTAK----VISYDDTPLAFTALRNGNVQAITQDDAKLVGLL 170 Query: 206 LTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + I P I+K I +G+ +V+ T Sbjct: 171 GNIPEAQKADFEISPFSITKEYQGVGIPKGEDRLTAVVNETL 212 >gi|307705805|ref|ZP_07642648.1| ABC transporter solute-binding protein [Streptococcus mitis SK597] gi|307620637|gb|EFN99730.1| ABC transporter solute-binding protein [Streptococcus mitis SK597] Length = 268 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 85/261 (32%), Gaps = 15/261 (5%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ L F + ++ L IK +G L +N F V Sbjct: 4 MKKVLMTMFGLVMLPLLFACSNNQSAGLEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R Sbjct: 64 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 119 DFSTPYYTSKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 175 SLPKNGNLITDLKSRQVDAVIFEEPVAKGFVENNPDLAIAELNFEKEQDDSYAVAMKKDS 234 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 E V T + + EL Sbjct: 235 KELKEAVDKTIQRLKDSGELD 255 >gi|308177955|ref|YP_003917361.1| glutamate ABC transporter substrate-binding protein GluB [Arthrobacter arilaitensis Re117] gi|307745418|emb|CBT76390.1| glutamate ABC transporter, substrate-binding protein GluB [Arthrobacter arilaitensis Re117] Length = 276 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 82/240 (34%), Gaps = 7/240 (2%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ GI G + ++ GFDVD + ++ + +I+++ + R LQ+ Sbjct: 35 KIRIGIKYDQPGLGFKDGD-NYTGFDVDVAKYVAGELGYTEDQIEFISAPSANRETMLQN 93 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 Q+D++ T R + F + GQ ++ I L G ++C G+ Sbjct: 94 DQVDMIFATYSITDERNKV--VDFAGPYFVAGQDLLVPNDSDIKGPEDLDGKNLCSVTGS 151 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T+ + D + + + E DA T D L L + Sbjct: 152 TSAQKVKDNYAKN---TNLQELPGYAECTTQMSGGTIDAVTTDDIILAGLAAQPAYQGKF 208 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 ++ S+ + G + +I + M+ + E + + N + Sbjct: 209 KVVGAPFSEENYGVGLPDGTDKCADI-NAAITKMIESGEWQKALDKNTEGTGYKPNAETN 267 >gi|229047848|ref|ZP_04193427.1| Arginine-binding extracellular protein artP [Bacillus cereus AH676] gi|228723509|gb|EEL74875.1| Arginine-binding extracellular protein artP [Bacillus cereus AH676] Length = 259 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 88/254 (34%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N + L G + + V A+ + G Sbjct: 1 MKKLVSISFALILIVSIFSACSNGESKETKGNKKVLVMGTSADYKPYEYVDASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|227877818|ref|ZP_03995842.1| glutamine ABC superfamily ATP binding cassette transporter, binding precursor [Lactobacillus crispatus JV-V01] gi|256850696|ref|ZP_05556120.1| glutamine-binding protein [Lactobacillus crispatus MV-1A-US] gi|293381615|ref|ZP_06627599.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus crispatus 214-1] gi|227862579|gb|EEJ70074.1| glutamine ABC superfamily ATP binding cassette transporter, binding precursor [Lactobacillus crispatus JV-V01] gi|256712467|gb|EEU27464.1| glutamine-binding protein [Lactobacillus crispatus MV-1A-US] gi|290921799|gb|EFD98817.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus crispatus 214-1] Length = 272 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 86/234 (36%), Gaps = 10/234 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 L + ++ +K+ + G+ F G +GF++D +AL+ + Sbjct: 19 TLTACGKHASNNVYQKVKESKTIVWGVRADTRLFGLTNIKTGHIEGFEIDLAKALTKQML 78 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +K ++ A R L++ +D + T R + F + G ++ Sbjct: 79 GKDAKTDFVTTTANTRIPLLKNGNVDAVLATMTITPERAK--QVTFSKPYFPAGSSLLVP 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I +V L G ++ GTT + Y + ++ + +A +A++ Sbjct: 137 NNSKIKNVKDLEGKTVLAVKGTTAVDDVHKYAPKA----RILQYDDYGQAMSALKANQGV 192 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 A T D L + + P + ++ + S +P A+ +G + + + Sbjct: 193 ALTTDNGLLAGIAQ--ENPG-YKLVGGVYSNAPYGIAVNKGQKQMADHIDQALN 243 >gi|269926019|ref|YP_003322642.1| extracellular solute-binding protein family 3 [Thermobaculum terrenum ATCC BAA-798] gi|269789679|gb|ACZ41820.1| extracellular solute-binding protein family 3 [Thermobaculum terrenum ATCC BAA-798] Length = 307 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 84/243 (34%), Gaps = 12/243 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDP 75 T+ S+ A L I G+L G + V G G DVD AL+ A+ Sbjct: 58 TTAASSPAPQLKLIND-GYLTVGTDASYPPMESVDPKTGQIVGADVDLANALAKAMGLKG 116 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +K+ + + ALQ + DI+ + + T R + F G ++ Sbjct: 117 AKM--VNNSFDTIIAALQRGKFDIIMSSMNDTPER--RQQVDFVD-YMTASIGIVVPSDS 171 Query: 136 GI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I S L G +I VQ GT L + K F + + A + D Sbjct: 172 NIKADSYKDLCGYTISVQRGTVELDELQKVNEQCTKKMTLKTFTQDTDAWQALVSGHVDV 231 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 YT D+ + PS+ + + S A+ + + + ++ + + Sbjct: 232 YTSDLPVTA--FHIKENPSKFKLAGEPFSAGQNYGIAVPKNRQDLKDALAKALEQIRASG 289 Query: 253 ELG 255 E Sbjct: 290 EYD 292 >gi|262204220|ref|YP_003275428.1| extracellular solute-binding protein family 3 protein [Gordonia bronchialis DSM 43247] gi|262087567|gb|ACY23535.1| extracellular solute-binding protein family 3 [Gordonia bronchialis DSM 43247] Length = 340 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 88/221 (39%), Gaps = 10/221 (4%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 + DI G L G++ G F+ GD +GFDVD R ++ AIF DP ++++ L+ Sbjct: 96 TMADIVAHGRLIVGLDIGSNLFSFRDPMTGDIRGFDVDLSREITRAIFGDPGRVEFRVLS 155 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + ER AL++ +D++ + T + ++F Y Q + + I+ +QL+ Sbjct: 156 SAERVEALRTGAVDVVVKTMSITC--DRLRDISFSAPYYVASQRILAVQNSAITGPAQLA 213 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G +C G T+ + + + + + DA T D + L L Sbjct: 214 GKRVCSARGATSIGRIQSIAPQA----RMVTTTTWADCLVLLQQGQVDAVTTDDAILAGL 269 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 P V+ P + I G + ++ Sbjct: 270 AEQ--DPWVRVVGPSLGE-EYYGVGIPPGRDDMVRFINGVL 307 >gi|261753610|ref|ZP_05997319.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3 str. 686] gi|261743363|gb|EEY31289.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3 str. 686] Length = 256 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 81/248 (32%), Gaps = 15/248 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +++ A K+ ++ F + +G GFD Sbjct: 1 MKSLVLAGLASVVLTVSIQAPVQA------KEWKEIRIASEGAYPPFNYMSPDGKLVGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL A+ +K + + +LQ+ + D + + T R+ + F Sbjct: 55 LDIANALCEAM---EAKCTIVANDWDGMIPSLQANKFDAVIASMAITDERKKQVA--FTD 109 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y ++ K I S S +G + QAGTT D + ++ Sbjct: 110 RYYTTPLAVVVPKDSDIVSLEPSAFAGKMVGAQAGTTQGNYADDVYGKAGAD--VKLYPT 167 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E +A + R DA D + S++ +A A+ QGD + Sbjct: 168 ADEANADLESGRLDALAADKFIAADWLKKQGADCCKFLGDIPGSETQIAVALRQGDDDLR 227 Query: 239 NIVSWTHY 246 + Sbjct: 228 EQFNAAIK 235 >gi|256844627|ref|ZP_05550112.1| glutamine-binding protein [Lactobacillus crispatus 125-2-CHN] gi|256613168|gb|EEU18372.1| glutamine-binding protein [Lactobacillus crispatus 125-2-CHN] Length = 272 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 86/234 (36%), Gaps = 10/234 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 L + ++ +K+ + G+ F G +GF++D +AL+ + Sbjct: 19 TLTACGKHASNNVYQKVKESKTIVWGVRADTRLFGLTNIKTGHIEGFEIDLAKALTKQML 78 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +K ++ A R L++ +D + T R + F + G ++ Sbjct: 79 GKDAKTDFVTTTANTRIPLLKNGNVDAVLATMTITPERAK--QVTFSKPYFPAGSSLLVP 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I +V L G ++ GTT + Y + ++ + +A +A++ Sbjct: 137 NNSKIKNVKDLEGKTVLAVKGTTAVDDVHKYAPKA----RILQYDDYGQAMSALKANQGV 192 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 A T D L + + P + ++ + S +P A+ +G + + + Sbjct: 193 ALTTDNGLLAGIAQ--ENPG-YKLVGGVYSNAPYGIAVNKGQKQMADHIDQALN 243 >gi|328882495|emb|CCA55734.1| amino acid ABC transporter solute-binding protein [Streptomyces venezuelae ATCC 10712] Length = 350 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 77/243 (31%), Gaps = 17/243 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFD 73 T + + + IK+RG L G++ + +GFD+D RA++ I Sbjct: 81 ASLTPSTADGPSIAAIKQRGKLVVGVDQSSYRWGYRNPETRSLEGFDIDLARAIAKDILG 140 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 + + + +R AL S ++D++ R R +AF + GQ + K Sbjct: 141 SEDAVIFRAIPTNQRIAALDSGKVDLVVRTMTINCKR--IQQVAFSTAYFQAGQQVLAPK 198 Query: 134 KKGISSVSQ--LSGASICVQAGTTTELTL---------ADYFKAHNMKYHPIVFERVEEI 182 + L+G +C G+T L D + + Sbjct: 199 LAQDITGYDASLNGKRVCTAEGSTAYEALEEKSFGAVFKDEGDGTKDDKDLLTVPNQLDC 258 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + + DA D + + + + A G+ + V+ Sbjct: 259 LARLQLGQVDAVVTDNALAAGQAAQDP---AVELKGRPFTTEFYGVAAKLGNDDLVRRVN 315 Query: 243 WTH 245 Sbjct: 316 QVL 318 >gi|284032614|ref|YP_003382545.1| extracellular solute-binding protein family 3 protein [Kribbella flavida DSM 17836] gi|283811907|gb|ADB33746.1| extracellular solute-binding protein family 3 [Kribbella flavida DSM 17836] Length = 307 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 48/229 (20%), Positives = 83/229 (36%), Gaps = 8/229 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 ++ IK RG G+ ANG GFD++ R +S+ + DP KI+Y + Sbjct: 58 SATFAKIKARGNAVVGVKADQPNLGYKDANGKRCGFDIEIARMVSAQLGFDPEKIEYKEI 117 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVS 141 + R A+ +ID T R+ ++F + GQ ++ K + Sbjct: 118 PSANRETAIAGGEIDYYVGTYSITDKRKKL--VSFAGPYFIAGQDLLVRKDDTSMDAGKD 175 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G +C G+T + D + + F+ E + ++ DA T D + L Sbjct: 176 GLKGKKVCSATGSTPIQKVKD--EGLTEPNNISEFKTYSECVSQLLDNKTDAVTTDDAIL 233 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 P E ++ S + D + V+ A T Sbjct: 234 KGYAANA--PDELRVVGKPFSTEKYGIGLPLADKALRDKVNAGLEASFT 280 >gi|160933931|ref|ZP_02081318.1| hypothetical protein CLOLEP_02793 [Clostridium leptum DSM 753] gi|156866604|gb|EDO59976.1| hypothetical protein CLOLEP_02793 [Clostridium leptum DSM 753] Length = 293 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 79/239 (33%), Gaps = 16/239 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74 ++ +T+ ++ G L G++ GD GFD+D + + S + + Sbjct: 37 SSSAAATDDQSWEKVESAGTLVLGLDDAFPPMGYKDTETGDIIGFDIDIAKEVCSRLGIE 96 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ P++ + L++ +D L T R+ L + Q ++ Sbjct: 97 ---LKLQPIDWNNKQSELENGNVDCLWNGFSKTPERDEQFNL--SIPYMKNEQIILVKTD 151 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPIVFERVEEIDAAYRAHRCD 192 ++ L+G +I VQA ++ E L + + E + D Sbjct: 152 SDYQTLEDLAGKTIGVQADSSAESALEAEENKEFKDSLGEIVKIEDYAMAVLEIQNGTID 211 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDII------SKSPLAPAIIQGDTEWYNIVSWTH 245 A + D + A N+ P + IL D + + D V Sbjct: 212 AISIDE--VVARFYLNNDPDAYRILSDSDGNALSLATEDYVIGFRKSDNALKEKVEEAL 268 >gi|119383776|ref|YP_914832.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119373543|gb|ABL69136.1| amino acid ABC transporter substrate-binding protein, PAAT family [Paracoccus denitrificans PD1222] Length = 281 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 75/198 (37%), Gaps = 5/198 (2%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + + LF +A L DI G L+CG+ A+G+ GFDV+ C +++ Sbjct: 23 IAALPLFLVGTPASADKLDDIVSSGALRCGVMLDFPPLGYRDASGNPAGFDVETCNDIAT 82 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + P ++ A +R AL S +DI+ T TL R + + F Sbjct: 83 QLGVKPEIVE---TQAPQRVPALVSGTVDIVVGGTTPTLERAKT--VTFTDPYNVGKLVV 137 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + IS +L G S+ + GT E + + E A R Sbjct: 138 VTGSANKISGFDELKGKSVALVRGTLPETAYLAACNGWSEGCKNLSLANNAEQITAVRQG 197 Query: 190 RCDAYTGDISALYALKLT 207 R +A S + ALK + Sbjct: 198 RANAMIETNSFMSALKAS 215 >gi|322373402|ref|ZP_08047938.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C150] gi|321278444|gb|EFX55513.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C150] Length = 265 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 32/261 (12%), Positives = 72/261 (27%), Gaps = 15/261 (5%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDW 56 M K F ++ L + + IK + + + F Sbjct: 1 MKKFWFVLTALVATCVLVACSGSQGVKPQTIKDKKKIVVATESEFAPFEFKTLINGKDTL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+ + +++ ++ ++QS + DI T R+ Sbjct: 61 VGADIELAKAIGKKLGVK---VEFSVMSFDNVLASVQSGKADIAIAGISVTNERKKV--Y 115 Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K +S L+ ++ Q G+ E + Sbjct: 116 DFSDSYYTAENVVIVKKDKVNDFTSTDSLAKQTVGTQKGSVQETVAKKQIPKA----SVV 171 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E+ ++ + A + + ND + A A +G Sbjct: 172 SLASNGEMINELKSGQIQAVVLEKAIAEGYISQNDDLTLANFNLKSDGSDAYAVATRKGS 231 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 ++ + + Sbjct: 232 DALLKEINAVIKETKNSGKFD 252 >gi|306831675|ref|ZP_07464832.1| exopolyphosphatase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426100|gb|EFM29215.1| exopolyphosphatase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 273 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 93/281 (33%), Gaps = 18/281 (6%) Query: 1 MY-KDFFVSILCL---IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKAN 53 M K F+ +L L + L S+N ++ I K+G L I+ F V Sbjct: 1 MKIKKIFLGVLALISVLTLAACGSSSNENLQEKIVKKGKLVVAISPDYAPFEFKALVNGK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G DV+ +A++ + + ++ ++ +LQ+ + D+ +T R Sbjct: 61 DTIVGADVELAQAIADELGVE---LELSSMSFDNVLSSLQTGKADMAISGLSYTEERAKV 117 Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F Y ++ +SV LSG + VQ GT E D Sbjct: 118 --YNFSDAYYETENAILVKASDVDTYTSVDSLSGLKVAVQKGTIEENLAKDQL----SDS 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + + E ++ + A + N + + A A+ Sbjct: 172 NIVSLTAMGEAINELKSGQVQAVDLEKPVAEGYLSQNSDLALASFALETGEGDAKAVAMP 231 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + E V+ + ++ + Q++ D + D Sbjct: 232 KDSGELVKTVNKVIKKLAKEDKYKQFISDAAQLTGDAVDED 272 >gi|86360224|ref|YP_472113.1| amino acid ABC transporter substrate-binding protein [Rhizobium etli CFN 42] gi|86284326|gb|ABC93386.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 278 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 87/251 (34%), Gaps = 13/251 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCR 65 +S+ + A L I L+C + FA + GFDVD C Sbjct: 6 LSLTVAFAGMAAAVPAKADQLDTIMSAKTLRCATFADVPPFASPDPKTREMAGFDVDLCG 65 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++ + P++ + R ++ ++DI N +TL R + F Y Sbjct: 66 AIAKELGVKAE---IKPVSVEARVPEVKLGRVDITVANLAYTLSRAEQIQ--FSDPYYLA 120 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + I+ S + +G I G+T+E+++ K P+ F+ A Sbjct: 121 KEMLIVPADDAGKSKADYAGQRIASTKGSTSEMSI------KLNKSEPLTFQDTASAYLA 174 Query: 186 YRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + + + + + E ++ + + P+ + + + ++ Sbjct: 175 VQQGKARGMVANTMTTTKFVNESKSKGKEMRMIEEPMLYQPIGIGMAKDQPKLTAKINEI 234 Query: 245 HYAMVTAEELG 255 + + + E+ Sbjct: 235 LHKLDASGEIN 245 >gi|322833412|ref|YP_004213439.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] gi|321168613|gb|ADW74312.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] Length = 280 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 85/235 (36%), Gaps = 13/235 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDD 74 S A +L DI+ RG L C + + + F+ G DVD C AL+ + Sbjct: 17 MAAFSSAKADVLSDIQARGSLNCAVYSDVPPFSSPDPKTRQLAGMDVDLCTALAKQMGVK 76 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + +P + + R + + + D+L N +T R + F Y + ++ K Sbjct: 77 ---LNLMPTSIEARIAVIATGRADVLIANLAYTKTR--GQQIQFSDPYYVAKEVLVVKKP 131 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + + G I GTT+E ++ + + F+ A ++ + Sbjct: 132 NVDKTRADFKGKRISATKGTTSEQSI------YLAGAKAVTFQDAASAFLALEQNKAVGF 185 Query: 195 TGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + + E ++ + ++ P+ + + + V+ + AM Sbjct: 186 VTNTMTAIKMISQAGKDGIELGMIKEPMALEPIGVGMKKDEPALLAKVNSSLKAM 240 >gi|229093214|ref|ZP_04224332.1| Arginine-binding extracellular protein artP [Bacillus cereus Rock3-42] gi|228690188|gb|EEL43982.1| Arginine-binding extracellular protein artP [Bacillus cereus Rock3-42] Length = 259 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 90/254 (35%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N K + L G + + V+A+ + G Sbjct: 1 MKKLLSISFALILIVSIFSACSNGEEKATGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFKVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|227820464|ref|YP_002824435.1| substrate-binding component of ABC transporter [Sinorhizobium fredii NGR234] gi|227339463|gb|ACP23682.1| putative substrate-binding component of ABC transporter [Sinorhizobium fredii NGR234] Length = 267 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 86/238 (36%), Gaps = 10/238 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 ++ A+ L DI RG ++ G+ TG V G+ G+DVD ++ Sbjct: 23 SAVEAQAATLNDIISRGTVRIGVLTGAPPMGMVDEQGNPTGYDVDVANLIA---GYLSLP 79 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + +PL R ALQ+ ++D L T R + + F I + Sbjct: 80 GELVPLTPPARIPALQTGKVDFLVATLAPTGERAKT--VMFTQPYSAFNMDIISGPDQKF 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + ++ L G + V G++ E L KA +V+E A A + DA Sbjct: 138 AKLADLEGKRVAVNRGSSQETALR---KAAVPGLEIVVYEDDSTSAQALIAGQVDAVAL- 193 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + RP + + + + A D E ++ Y M + +L Sbjct: 194 -PSTVGEAIIKQRPDAGLQVGFTFFQQGNSMATRMEDFEIRQWLNTAIYLMKISGDLD 250 >gi|228960422|ref|ZP_04122074.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis serovar pakistani str. T13001] gi|229111628|ref|ZP_04241179.1| Arginine-binding extracellular protein artP [Bacillus cereus Rock1-15] gi|229146728|ref|ZP_04275094.1| Arginine-binding extracellular protein artP [Bacillus cereus BDRD-ST24] gi|296504644|ref|YP_003666344.1| arginine-binding protein [Bacillus thuringiensis BMB171] gi|228636748|gb|EEK93212.1| Arginine-binding extracellular protein artP [Bacillus cereus BDRD-ST24] gi|228672010|gb|EEL27303.1| Arginine-binding extracellular protein artP [Bacillus cereus Rock1-15] gi|228799283|gb|EEM46248.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis serovar pakistani str. T13001] gi|296325696|gb|ADH08624.1| arginine-binding protein [Bacillus thuringiensis BMB171] Length = 259 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 88/254 (34%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N + L G + + V A+ + G Sbjct: 1 MKKLVSISFALILIVSIFSACSNGESKETKGNKKVLVMGTSADYKPYEYVDASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + V + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGVEIKEAPEEVGAAIALPKNSDKTA 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|307243546|ref|ZP_07525694.1| bacterial extracellular solute-binding protein, family 3 [Peptostreptococcus stomatis DSM 17678] gi|306493102|gb|EFM65107.1| bacterial extracellular solute-binding protein, family 3 [Peptostreptococcus stomatis DSM 17678] Length = 266 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 35/256 (13%), Positives = 82/256 (32%), Gaps = 14/256 (5%) Query: 1 MYKDFF--VSILCLIILFFTSFSTNASILGDIK----KRGFLKCGINTGLVGFAEVKANG 54 M K +L L ++ T + D K + + G++ V + Sbjct: 1 MKKGIIKKTVMLGLGLVLATGLVACSDKKDDQKATSTDKKEIVMGLDNTFVPMGFLNDKN 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + +GFD+D +++ ++ + AL + +D L T R+ + Sbjct: 61 ELEGFDIDLANEAFKRAGY---TVKFQNIDWSMKEQALDNGNVDCLWNGYSITEERKARV 117 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYH 172 F + + Q I + + ++ L + QA ++ + + M Sbjct: 118 A--FSKPYFDNKQIAITMSTESPTKLADLKDQVVGTQAASSALEAIEANKEFIGMIKDQK 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 P+ ++ ++ R + GD L ++ +L + + Sbjct: 176 PVTYDTYDKALRDLEIGRIKSVVGDEVLLKYYITQ-RGADKYKVLEGDLGSEQYGVGFRK 234 Query: 233 GDTEWYNIVSWTHYAM 248 DT+ + + M Sbjct: 235 KDTDLRDKIDKALDDM 250 >gi|300714972|ref|YP_003739775.1| Lysine-arginine-ornithine ABC transporter, periplasmic ligand binding protein [Erwinia billingiae Eb661] gi|299060808|emb|CAX57915.1| Lysine-arginine-ornithine ABC transporter, periplasmic ligand binding protein [Erwinia billingiae Eb661] Length = 259 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 85/251 (33%), Gaps = 24/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+F+ + L+ G++ F +G +GFD Sbjct: 1 MKKIALSALVLLACASSTAFAAES-----------LRFGVDPTFPPFESKAPDGSLQGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ A+ + K ++ ALQ+++ D + T R +AF Sbjct: 50 IEMGNAICHQM---KVKCVWVQTGYDGIIPALQARKFDAILSAMAMTDKR--RQQVAFTD 104 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y + K G+ L G S+ V GTT E + + + + Sbjct: 105 MLYNTPSALVTKKDSGLKPDAESLKGKSVGVAQGTTQETYAKAVWA--GTGINVVSYPNQ 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 EEI + R DA ++ L + + ++ I D + + + D Sbjct: 163 EEIWPDLASGRVDATLTSAASAETGFLKSPQGKDYQISGDTLYDKKYFGEGVGIGLRKDD 222 Query: 235 TEWYNIVSWTH 245 ++ Sbjct: 223 RARVEKINAAL 233 >gi|270489688|ref|ZP_06206762.1| glutamate-aspartate periplasmic-binding protein [Yersinia pestis KIM D27] gi|270338192|gb|EFA48969.1| glutamate-aspartate periplasmic-binding protein [Yersinia pestis KIM D27] Length = 259 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 78/212 (36%), Gaps = 6/212 (2%) Query: 38 CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQ 93 G V F+ G+ D+ + AI + +++ +P+ ++ R LQ Sbjct: 1 MGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIRKELNAPNLEVKLIPITSQNRIPLLQ 60 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 + D +T L R AF + G + K + L+G ++ V +G Sbjct: 61 NGTFDFECGSTTNNLER--QQQAAFSNTIFVVGTRLLTKKDSEVKDFKDLAGKAVVVTSG 118 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT+E+ L + NM I + + + R A+ D + L + +P E Sbjct: 119 TTSEVLLNKLNEKDNMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDE 178 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 I+ S+ + + D + ++ T Sbjct: 179 WSIVGTPQSEEAYGCMMRKNDPAFKALLDKTI 210 >gi|229098624|ref|ZP_04229564.1| Arginine-binding extracellular protein artP [Bacillus cereus Rock3-29] gi|229117650|ref|ZP_04247021.1| Arginine-binding extracellular protein artP [Bacillus cereus Rock1-3] gi|228665829|gb|EEL21300.1| Arginine-binding extracellular protein artP [Bacillus cereus Rock1-3] gi|228684703|gb|EEL38641.1| Arginine-binding extracellular protein artP [Bacillus cereus Rock3-29] Length = 259 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 92/254 (36%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N + + + L G + + V+A+ + G Sbjct: 1 MKKLLSISFALILIVSMFSACSNGDVKEEKGNKKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDIDIAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ K + K +R Sbjct: 116 TDIYFVAKNMIVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEFKKQVDFKAEGR--DR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAILEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|89899769|ref|YP_522240.1| extracellular solute-binding protein [Rhodoferax ferrireducens T118] gi|89344506|gb|ABD68709.1| extracellular solute-binding protein, family 3 [Rhodoferax ferrireducens T118] Length = 280 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 93/246 (37%), Gaps = 4/246 (1%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + + S L + RG L G + + A+ +GFD+D + +S A+FD+P Sbjct: 19 GASVNAAGTSKLDQVLARGKLIVGTGSTNAPWHFKSADNKLQGFDIDIAKIISKALFDNP 78 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 KI+++ ++ R + + ++DI + T R + +AF + +G G + Sbjct: 79 DKIEFVNQSSDARIPNITTDKVDITCQFLTVTGGR--AQQVAFTIPYFREGVGLMTKTGS 136 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + L A V + A ++ + + A + R DA Sbjct: 137 KRGDYAALKAAGASVNVAVLQNVYAESMVHAALPMAKVAQYDSPDLMYQALNSGRADAAA 196 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D S++ P ++ + A A+ +GD +W N V+ + +T E Sbjct: 197 TDQSSI--SWFIKQNPGKYKDAGYGWNPQTYACAVKRGDQDWLNFVNTALHEAMTGVEFD 254 Query: 256 ITQKNI 261 + Sbjct: 255 AYAASY 260 >gi|38234609|ref|NP_940376.1| ABC transporter [Corynebacterium diphtheriae NCTC 13129] gi|38200873|emb|CAE50578.1| Putative ABC transpoter membrane protein [Corynebacterium diphtheriae] Length = 315 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 49/220 (22%), Positives = 87/220 (39%), Gaps = 11/220 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 S N + +++RG+L GI+ + +G+ KGF+VD R ++ IF +P Sbjct: 57 LLGSLRPNGDDVPQVRQRGYLIVGIDQSQNLLSFRDTDGELKGFEVDLAREVARDIFGEP 116 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 KI + +++ AL+ Q+D++ R+ T RE + F + + K Sbjct: 117 -KIDFRYVDSSSWVKALEDGQVDMVLRSISVT--RERQDQVFFSTPYFSGKTRILTQKDS 173 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I + L G ++CV +T L + + A + + DA Sbjct: 174 DIHGAADLKG-TVCVTNLSTGSKRLGAIAP----NSTMLAVRNSADCLLALQQNHADAVI 228 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 D + L + P H I+ D I+ A A + T Sbjct: 229 SDDAILSGMIAQ--DPFTH-IVGDPIATEQYAVAFAKPRT 265 >gi|291518760|emb|CBK73981.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Butyrivibrio fibrisolvens 16/4] Length = 298 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 99/272 (36%), Gaps = 40/272 (14%) Query: 1 MYKDF------FVSILCLIILFFTSFSTNAS----------------------ILGDIKK 32 M K+F + L + FT+ +AS L +IK+ Sbjct: 1 MKKNFINKVTGLTLVGALAVSGFTACGASASSSDVAGTDEATVESASSAAGYRTLDEIKE 60 Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 G + G+ + F V NG++ G+DV F + + I Y+ A R L Sbjct: 61 SGTINIGVFSDKSPFGFVDENGEYAGYDVYFAERIGEDLGVK---INYVSTEAANRIEYL 117 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQ 151 Q+ ++DI+ N T R + + F G + + S+ L + I V Sbjct: 118 QTGKVDIILANFTVTEER--AQEVDFALPYMNVALGVVSPDSAVVESLDDLGADDQIIVI 175 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 +GTT E L + ++ E A+ A+ D + + A + + Sbjct: 176 SGTTAETYLT----KNYPDIKLQKYDAYAEAKTAFENGTGVAWANDNTEVIA--FSLENE 229 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 V +P + + +APA+ +G+ ++ Sbjct: 230 GYTVGIPSLGDQDTIAPAVTKGNDTLLKWLNE 261 >gi|300870610|ref|YP_003785481.1| polar amino acid uptake ABC transporter amino acid-binding protein [Brachyspira pilosicoli 95/1000] gi|283462655|gb|ADB22528.1| oligopeptide-binding protein 6 [Brachyspira pilosicoli] gi|300688309|gb|ADK30980.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Brachyspira pilosicoli 95/1000] Length = 271 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 79/234 (33%), Gaps = 8/234 (3%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + S + L +K+ G L G++ G+ GFD+D + +++ + + Sbjct: 23 ASQASSAADNSLQKVKESGKLVLGLDDTFAPMGFRDEEGNIVGFDIDLAKEVANRLGVEL 82 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-K 134 P++ L+L+ +D++ R+ + F + + + + Sbjct: 83 VA---KPVDWSSVVLSLKKGDVDVVWNGFAINETRKE--QVNFTKPYLNNRLMIVKNADR 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + L G + VQ G++ +L ++ A R DA Sbjct: 138 DDIKTKDDLKGKILGVQTGSSNYESLEAD-PISKETKEIRQYDIYANAFLDLEAKRIDAV 196 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 D + ++ + ++ I+ + + DTE N + M Sbjct: 197 IVDE-IVARYYISKENADFELLEEYPITAKSFGVGVRKTDTELLNAIDKALDDM 249 >gi|282864976|ref|ZP_06274030.1| extracellular solute-binding protein family 3 [Streptomyces sp. ACTE] gi|282560401|gb|EFB65949.1| extracellular solute-binding protein family 3 [Streptomyces sp. ACTE] Length = 304 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 86/227 (37%), Gaps = 10/227 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + +RG+L G E +G + GFD++ R +++++ +P KI++ Sbjct: 53 SPTWRKAHRRGYLVVGAKEDQPYLGEKDPASGVYSGFDIEIARMMAASLGFEPKKIRFRT 112 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVS 141 + + R ALQ+ QID +R+ +G F Y GQG ++ I Sbjct: 113 IASANRETALQNGQIDYYVGTYTINDMRKKIVG--FAGPYYMAGQGLLVRTDENDIHGPQ 170 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G ++C AG+T +A + + ++ + DA T D + L Sbjct: 171 DLAGKTVCSAAGSTPYQRIAADYPKAK----LVAYDTYSICVDNLLTFQVDAVTTDDAIL 226 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 P E ++ S+ P + + D + A Sbjct: 227 LGFAAKA--PDEMKVVGKPFSEEPYGIGVPRSDNALRLALDDALEAN 271 >gi|16759748|ref|NP_455365.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764192|ref|NP_459807.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142479|ref|NP_805821.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|161614918|ref|YP_001588883.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550477|ref|ZP_02344234.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992066|ref|ZP_02573164.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230732|ref|ZP_02655790.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236762|ref|ZP_02661820.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240698|ref|ZP_02665630.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168466431|ref|ZP_02700293.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820020|ref|ZP_02832020.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194442423|ref|YP_002040066.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450493|ref|YP_002044858.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470062|ref|ZP_03076046.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194738210|ref|YP_002113921.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197248579|ref|YP_002145786.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264430|ref|ZP_03164504.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200390987|ref|ZP_03217598.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929924|ref|ZP_03220945.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207856266|ref|YP_002242917.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213163837|ref|ZP_03349547.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213423458|ref|ZP_03356440.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213424777|ref|ZP_03357527.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213649899|ref|ZP_03379952.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213859569|ref|ZP_03385273.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238913896|ref|ZP_04657733.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|25296351|pir||AC0601 glutamine-binding periplasmic protein precursor [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|1649035|gb|AAB49427.1| high-affinity periplasmic glutamine binding protein [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16419336|gb|AAL19766.1| glutamine high-affinity transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502041|emb|CAD05277.1| glutamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi] gi|29138110|gb|AAO69681.1| glutamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|161364282|gb|ABX68050.1| hypothetical protein SPAB_02672 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194401086|gb|ACF61308.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408797|gb|ACF69016.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456426|gb|EDX45265.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713712|gb|ACF92933.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630984|gb|EDX49570.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197212282|gb|ACH49679.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197242685|gb|EDY25305.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290080|gb|EDY29437.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199603432|gb|EDZ01978.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320918|gb|EDZ06119.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205324505|gb|EDZ12344.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329625|gb|EDZ16389.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334678|gb|EDZ21442.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205340418|gb|EDZ27182.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343029|gb|EDZ29793.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206708069|emb|CAR32360.1| glutamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|267992576|gb|ACY87461.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157414|emb|CBW16903.1| glutamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911853|dbj|BAJ35827.1| glutamine ABC transporter substrate binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085103|emb|CBY94890.1| Membrane-bound lytic murein transglycosylase F Murein lyase F; Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226403|gb|EFX51454.1| Glutamine ABC transporter, periplasmic glutamine-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616305|gb|EFY13214.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619555|gb|EFY16430.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622749|gb|EFY19594.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628661|gb|EFY25448.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631598|gb|EFY28354.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637125|gb|EFY33828.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641675|gb|EFY38311.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644530|gb|EFY41070.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648464|gb|EFY44916.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654199|gb|EFY50522.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658114|gb|EFY54381.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663588|gb|EFY59790.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670324|gb|EFY66464.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671560|gb|EFY67682.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676916|gb|EFY72983.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682841|gb|EFY78860.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686520|gb|EFY82502.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323129136|gb|ADX16566.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323194583|gb|EFZ79776.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199086|gb|EFZ84182.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202041|gb|EFZ87100.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208933|gb|EFZ93870.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213918|gb|EFZ98688.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215230|gb|EFZ99975.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220850|gb|EGA05288.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227290|gb|EGA11458.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229908|gb|EGA14031.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233133|gb|EGA17229.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240868|gb|EGA24910.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243185|gb|EGA27205.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248724|gb|EGA32652.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251728|gb|EGA35595.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257540|gb|EGA41228.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261457|gb|EGA45038.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267888|gb|EGA51367.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272045|gb|EGA55460.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 248 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 82/245 (33%), Gaps = 20/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSLLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K ID+ T R+ + F Sbjct: 53 LWDAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ I SV L G + V++GT + DY KA+ F ++ Sbjct: 108 YKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + + + A +G E V Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGESLEAQQYGVAFPKGSDELREKV 222 Query: 242 SWTHY 246 + Sbjct: 223 NGALK 227 >gi|300313169|ref|YP_003777261.1| amino acid transport periplasmic protein [Herbaspirillum seropedicae SmR1] gi|300075954|gb|ADJ65353.1| ABC-type amino acid transport periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 268 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 92/252 (36%), Gaps = 13/252 (5%) Query: 1 MYKDF---FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + ++ L + + +A L DIK R + I+ G F A + + Sbjct: 1 MKKLLSFTRKAAAVVLGLACFAQAAHADALADIKARKKVLVAIDLGAPPFGMTNAKLEPQ 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV+ R L+ + + ++ + + R L + + D++ + T R+ + Sbjct: 61 GSDVETARLLAKDLGVE---LEIVQVTGPNRIPFLMTGKADMVISSFSITPERQKVVA-- 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F K + I S++ L G + V G + L + + F+ Sbjct: 116 FTQPYGASQFVVAAPKGENIKSLNDLVGKRVAVVRGNMQDSLLTPIAPK---GTNIVRFD 172 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + AA + + DA S A + PS+++ I P A + +G+ Sbjct: 173 DDATVTAAIISGQVDALCTPNSL--ASAIAKQNPSKNLETKFAIKDIPYAIGLRKGEPAL 230 Query: 238 YNIVSWTHYAMV 249 ++ A + Sbjct: 231 EKWLNEWISANL 242 >gi|304438667|ref|ZP_07398605.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368316|gb|EFM22003.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 268 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 36/255 (14%), Positives = 79/255 (30%), Gaps = 14/255 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M ++ ++ + S + + G + G++ N Sbjct: 1 MNWKAILTGATVLACSAALLAGCGSTEKVPSTDNAAEMGKIIVGLDDNFPPMGFKDENNK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDVD + + + +++ ++ + L+S ++ +L D T R+ Sbjct: 61 IVGFDVDLAEEAAKRLGRE---VEFKAIDWSSKEAELKSGRVQVLWNGLDITEKRKE--S 115 Query: 116 LAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F + Q + K ++ L+G ++ Q+ T E + Sbjct: 116 MLFSKPYMDNHQIIFVKKGNTAVTDEKSLAGKTVGTQSAGTVEEYMDASDFYKKEVKEVK 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQG 233 + R DA GD + + P L ++ S A + Sbjct: 176 KYPDYVAAFMDLENGRLDAVIGDE--IVGRYYMSKHPDTLDALDVVVGPVSEFGIAFAKD 233 Query: 234 DTEWYNIVSWTHYAM 248 +T+ + V M Sbjct: 234 NTKLRDEVQKVLDEM 248 >gi|330000991|ref|ZP_08303862.1| cystine-binding periplasmic protein [Klebsiella sp. MS 92-3] gi|328537826|gb|EGF64020.1| cystine-binding periplasmic protein [Klebsiella sp. MS 92-3] Length = 266 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 86/254 (33%), Gaps = 20/254 (7%) Query: 1 MYKDFF---VSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M + + ++ S ++L IK+RG L+ G+ F+ + Sbjct: 1 MKLALLGRQAMMGAMAVVLMAGVSVKTFAAENLLNQIKERGTLRVGLEGTYPPFSFQGDD 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+V+F L+ + P +L SK+ID++ + R+ Sbjct: 61 GKLTGFEVEFANELAKHLGVKAD---LKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I + + L G + V GT E ++ + + Sbjct: 117 -KYDFSTPYTVSGVQALVKKGNEGAIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGV 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + + + S+ A+ Sbjct: 172 DVRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTNNTLAVTGEAFSRQEAGVALR 229 Query: 232 QGDTEWYNIVSWTH 245 +G+ + V Sbjct: 230 KGNDDLLKAVDGAI 243 >gi|330838525|ref|YP_004413105.1| ABC-type transporter, periplasmic subunit family 3 [Selenomonas sputigena ATCC 35185] gi|329746289|gb|AEB99645.1| ABC-type transporter, periplasmic subunit family 3 [Selenomonas sputigena ATCC 35185] Length = 262 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 74/251 (29%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K FV + L L F + KK + G++ + + GF Sbjct: 1 MKKILFVCLSLMLAAGFMAGCGGQKAANDAPKK---IVIGLDDNFPPMGFLDEKNEITGF 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ + + + + +++ ++ + +QS +ID L + T R+ L F Sbjct: 58 DVELAKEAAKRLGTE---VEFKGIDWASKEAEIQSGRIDALWNGLEITEERKK--NLLFS 112 Query: 120 PITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 D Q I+ L + Q+ + T D K + Sbjct: 113 EPYMNDQQVIFKRANDASIAKEDDLKDKIVATQSASGTAEDYVDGHKDVTGYKDVKKYAD 172 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEW 237 R DA D + P + L + + A + DT Sbjct: 173 YLSAFMDLENGRVDAIVCDEII--GRYYMSKHPDKIAALDGHVGPVTQFGVAYRKDDTAL 230 Query: 238 YNIVSWTHYAM 248 + M Sbjct: 231 KEKMQKVLDEM 241 >gi|241895820|ref|ZP_04783116.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Weissella paramesenteroides ATCC 33313] gi|241870863|gb|EER74614.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Weissella paramesenteroides ATCC 33313] Length = 282 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 87/253 (34%), Gaps = 18/253 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-----GDIKKRGFLKCGINTGLVGFAEVK-ANG 54 M + + L +A + I K + G+ + G Sbjct: 9 MKSILAAAAVTLFAGATEGTVIHADTVKNQTYDRIMKTDRMNWGVKGDTKLMGLMNIKTG 68 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 +GFDVD + ++ I + +K++Y + + R L + ID + T R+ Sbjct: 69 KLEGFDVDMAKEITKRI-NPKAKVEYTQITSGTRVPMLLNGNIDAIIATMSITPDRQKV- 126 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV--QAGTTTELTLADYFKAHNMKYH 172 + F + GQ ++ K +V QL+ V G+T+ + D+ Sbjct: 127 -VDFSQSYFNAGQSILVKKSSKYHNVKQLNTPKARVLAVQGSTSIDEIKDFAPKAK---- 181 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + + A +A + DA T D LY + + + +K P A+ + Sbjct: 182 VVGLQDYATALTALKAGQGDALTTDNGILYGMAAGSK---TLEVRGGTFTKEPYGVAMQK 238 Query: 233 GDTEWYNIVSWTH 245 + + V+ Sbjct: 239 QNPKLVKAVNKAI 251 >gi|15807269|ref|NP_295999.1| amino acid ABC transporter periplasmic amino acid-binding protein [Deinococcus radiodurans R1] gi|6460086|gb|AAF11825.1|AE002060_4 amino acid ABC transporter, periplasmic amino acid-binding protein [Deinococcus radiodurans R1] Length = 272 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 47/240 (19%), Positives = 89/240 (37%), Gaps = 13/240 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S S A+ + ++KK+G L G + F ++G +GFD+D RA++ + ++ Sbjct: 33 SCSAGAASVAEVKKKGTLVLGTDPTFAPFEFKGSDGQVQGFDIDIARAVAHDLG---VRL 89 Query: 79 QYLPLNAKERFL-ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG- 136 + P+ A+ S ++D+ T R + F Y Q FI+ Sbjct: 90 EIRPVGFGALMPQAVTSGRVDVAMSGITITPERATV--VTFSQPYYRSAQVFIVRSGNPG 147 Query: 137 -ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + + + G ++ VQA TT + K V++ A R+ R A Sbjct: 148 KFTWPADVKGKTVGVQANTTGQYAAEQTLKPRG--ATIKVYDDFAAGLADVRSGRIAALI 205 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 GD + LK P + ++ +G ++ + T + + E Sbjct: 206 GDAPTVNDLKKRL--PGQFDKAGAVLVAEDYGMVFRKG-SDLAAAANRTLARLKRSGEYQ 262 >gi|284929259|ref|YP_003421781.1| amino acid ABC transporter substrate-binding protein, PAAT family [cyanobacterium UCYN-A] gi|284809703|gb|ADB95400.1| amino acid ABC transporter substrate-binding protein, PAAT family [cyanobacterium UCYN-A] Length = 261 Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 95/248 (38%), Gaps = 13/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 MYK F I+ ++ + +AS L +I++R + + + + +G + Sbjct: 7 MYKLFLTFIVSFALVLNHNIVLSAS-LEEIRERKKIIIAVKNNTRPLGFLNSKNQLEGLE 65 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + L+ I D + I + +N +ER + ++DI+ R + F Sbjct: 66 IDLAKQLAKDILGDSNAILFKFVNNQERLQTVIDGEVDIVIARMTIDSFRSRL--INFSS 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y D G I K + I S L ++I V + T + F N + + + Sbjct: 124 YYYLDSTGIITKKHQ-IKDSSDLFNSTIAVINHSDTISVIRSNFPKTN----LVGVDSYQ 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWY 238 E + + DA+ D S L ++ L +S L I + ++ Sbjct: 179 EAFKLMESQKVDAFAADNSILTGWIQEYP---QYHTLSLRLSSKSLGIGIPKGLKSSDLR 235 Query: 239 NIVSWTHY 246 NI++ + Y Sbjct: 236 NIINQSIY 243 >gi|225621464|ref|YP_002722723.1| family 3 extracellular solute-binding protein [Brachyspira hyodysenteriae WA1] gi|225216285|gb|ACN85019.1| extracellular solute-binding protein, family 3 [Brachyspira hyodysenteriae WA1] Length = 269 Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 87/243 (35%), Gaps = 17/243 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K I+ + + S +A + + GI+ F + ++G GFD Sbjct: 22 MKK-ILTLIMIISSMLIVSCGNSAKTTET--ENKKIYVGIDVDFPPFGYLDSDGKIGGFD 78 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D ++ +++ + K ALQ+K+ID + T R+ + F Sbjct: 79 YDIMSEVAK---LSGLNVEFTHMQFKGLLPALQAKKIDAIIAGMTVTEERKQF--VNFSE 133 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y Q ++HK I + L+G +I V GTT + + + + +N K F+ Sbjct: 134 PYYVSSQVMLVHKDDDTIKTFDDLAGKNIGVVIGTTGDTIMTENKEVNNEK-----FDTG 188 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A + + A D K + ++ A A+ + DT Sbjct: 189 AAAVLALKEKKIAAIVFDKEPC---KNFAKYNDDIKLIESDAIVENYAIALRKEDTALLE 245 Query: 240 IVS 242 ++ Sbjct: 246 KIN 248 >gi|269797366|ref|YP_003311266.1| extracellular solute-binding protein family 3 [Veillonella parvula DSM 2008] gi|269093995|gb|ACZ23986.1| extracellular solute-binding protein family 3 [Veillonella parvula DSM 2008] Length = 270 Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 87/270 (32%), Gaps = 17/270 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K V + + ++ F + + + + + G++ G+ GFD+ Sbjct: 4 KKMMAVGLAAVSMMAFVTGCGGDTKKANTELPKKVVIGLDDSFPPMGFKDEKGEIVGFDI 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + + D +++ ++ + L+SK+ID L + RE + F Sbjct: 64 DMAKEAAKRAGMD---VEFKAIDWSSKEAELKSKKIDALWNGLTVSPEREK--NILFSNT 118 Query: 122 TY-FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + I + L+G + VQ +T E L + + + Sbjct: 119 YMKDKQYVIVRNDDDSIKGKADLAGKVVGVQQASTGEAALQND-PSGKTVKETKSYADFV 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYN 239 R DA D A L P ++ I+ A + DT + Sbjct: 178 SAFMDLGIGRVDAVIADGVI--ARYLMTKEPGKYKIVEGTDYGVDNFAVGFRKDDTALRD 235 Query: 240 IVSWTH-------YAMVTAEELGITQKNIN 262 ++ A AE+ + +++ Sbjct: 236 KINGILAEMKKDGTADKIAEKWLGSGADLD 265 >gi|282849231|ref|ZP_06258616.1| putative lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Veillonella parvula ATCC 17745] gi|294793050|ref|ZP_06758196.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Veillonella sp. 6_1_27] gi|282580935|gb|EFB86333.1| putative lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Veillonella parvula ATCC 17745] gi|294455995|gb|EFG24359.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Veillonella sp. 6_1_27] Length = 270 Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 87/270 (32%), Gaps = 17/270 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K V + + ++ F + + + + + G++ G+ GFD+ Sbjct: 4 KKMMAVGLAAVSMMAFVTGCGGDAKKANTELPKKVVIGLDDSFPPMGFKDEKGEIVGFDI 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + + D +++ ++ + L+SK+ID L + RE + F Sbjct: 64 DMAKEAAKRAGMD---VEFKAIDWSSKEAELKSKKIDALWNGLTVSPEREK--NILFSNT 118 Query: 122 TY-FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + I + L+G + VQ +T E L + + + Sbjct: 119 YMKDKQYVIVRNDDDSIKGKADLAGKVVGVQQASTGEAALQND-PSGKTVKETKSYADFV 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYN 239 R DA D A L P ++ I+ A + DT + Sbjct: 178 SAFMDLGIGRVDAVIADGVI--ARYLMTKEPGKYKIVEGTDYGVDNFAVGFRKDDTALRD 235 Query: 240 IVSWTH-------YAMVTAEELGITQKNIN 262 ++ A AE+ + +++ Sbjct: 236 KINGILAEMKKDGTADKIAEKWLGSGADLD 265 >gi|215487125|ref|YP_002329556.1| cystine transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|215265197|emb|CAS09586.1| cystine transporter subunit [Escherichia coli O127:H6 str. E2348/69] Length = 266 Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 84/241 (34%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 14 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGMEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 74 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + L G + V GT E ++ + + ++ Sbjct: 129 IQALVKKGNEGTIKTADDLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242 Query: 245 H 245 Sbjct: 243 I 243 >gi|88704217|ref|ZP_01101931.1| Bacterial extracellular solute-binding protein, family 3 [Congregibacter litoralis KT71] gi|88701268|gb|EAQ98373.1| Bacterial extracellular solute-binding protein, family 3 [Congregibacter litoralis KT71] Length = 267 Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 79/247 (31%), Gaps = 13/247 (5%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 L L + ++ L + K L G++ GD GFDVD Sbjct: 6 QLVAGALLAFSLSLSPWALAGDTLDRVVKNKTLVVGMSGDQPPMNMRNRQGDLMGFDVDL 65 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 +AL++A+ D ++ P+ + AL ++D++ T R +F Sbjct: 66 AKALANAMHAD---LELSPMPFGDLTKALADGKVDMVLSGMAITAERSR--SASFVGPYM 120 Query: 124 FDGQGFIMHKK---KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G+ + + + S ++ + +T+ + + + E Sbjct: 121 MSGKSILATRTALAEIASGGIAVTEVKLAALKNSTSASFVLEAAP----NATLVEVANYE 176 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A + D L N V L ++ P A+ D E+ N+ Sbjct: 177 EAIAMVTSGEVAGMVADAPVCQLQVLRNPDAG-LVTLDKPLTIEPFGIAVSSDDPEFLNL 235 Query: 241 VSWTHYA 247 V A Sbjct: 236 VRNYLRA 242 >gi|89072894|ref|ZP_01159451.1| putative amino acid ABC transporter [Photobacterium sp. SKA34] gi|89051416|gb|EAR56871.1| putative amino acid ABC transporter [Photobacterium sp. SKA34] Length = 270 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 81/245 (33%), Gaps = 9/245 (3%) Query: 1 MYKDFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F V I L +L + + S L +K+RG L+ G++T V +A G+ G Sbjct: 1 MKRFFAVLITALTLLLSASHALAAEKSTLEQVKERGTLRVGLST-FVPWAMRDKQGELIG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ I+++P AL + + D++ T R +L + F Sbjct: 60 FEVDVAKRLAKDAGVK---IEFIPTAWDGIIPALLAGKFDVIIGGMSITPQR--NLSVLF 114 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G K+ +S V K + K F+ Sbjct: 115 TTPYSHSGVQLAASKELAGDKLSIADYNKRSVTLAVRRGAVTVQTAKKYFPKAKLRQFDD 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A + L + + +S+ AI QGD Sbjct: 175 ESQAFQEVLNGNAQAVLASTPKPEQMTLQYKDKL-FLPFKERLSQGSEGFAIRQGDFNLL 233 Query: 239 NIVSW 243 N + Sbjct: 234 NFFNN 238 >gi|260461007|ref|ZP_05809256.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|259033041|gb|EEW34303.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] Length = 269 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 83/241 (34%), Gaps = 8/241 (3%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L + +A + DI RG L I+T + + AN GFD++ + Sbjct: 15 FVLALSALLPSIASAQSVEDIISRGKLVVAIDTTTPPYGFLDANLKPTGFDIEVANKMGE 74 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 A+ ++++ + + R AL +KQ+D + T R ++ + + Sbjct: 75 ALG---VPVEFVTVTSPGRIPALLTKQVDAVISIFSITPAR--AIQIDYSIPYAGQSAVV 129 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 I K I V+ L G + + T E L N + F+ + A + Sbjct: 130 IAPKSTSIKGVADLVGKKVGL-TRGTGEDGLLTKAAEANPGIEILRFDDYSSLLQAMVSG 188 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 + DA G LK + + + +G+ ++ +AM Sbjct: 189 QIDAMGGGDYGEIYLK-KAQNGDAFEQKYVLKTF-YFGIGVAKGNDNLRQWINTWLFAMK 246 Query: 250 T 250 T Sbjct: 247 T 247 >gi|306845740|ref|ZP_07478309.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. BO1] gi|306274061|gb|EFM55888.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. BO1] Length = 257 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 84/248 (33%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L ++L + + + K+ ++ F + +G GFD Sbjct: 1 MLKSLVLAGLASVVLTVSVQAPVQA-----KEWKEIRIASEGAYPPFNYMSPDGKLVGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL A+ +K + + LQ+ + D + + T R+ + F Sbjct: 56 LDIANALCEAM---EAKCTIVANDWDGMIPGLQANKFDAVIASMAITDERKKQVA--FTD 110 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y ++ K S S +G + QAGTT D + ++ Sbjct: 111 RYYTTPLAVVVPKDSDSVSLEPSAFAGKMVGAQAGTTQGNYADDVYGKAGAD--VKLYPT 168 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E +A + R DA D + S++ +A A+ QGD + Sbjct: 169 ADEANADLESGRLDALAADKFIAADWLKKQGADCCKFLGDIPGSETQIAVALRQGDDDLR 228 Query: 239 NIVSWTHY 246 + Sbjct: 229 EQFNAAIK 236 >gi|89897621|ref|YP_521108.1| hypothetical protein DSY4875 [Desulfitobacterium hafniense Y51] gi|89337069|dbj|BAE86664.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 269 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 76/258 (29%), Gaps = 24/258 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKR------------GFLKCGINTGLVGFA 48 M K I+ ++++ + + LK G F Sbjct: 1 MKKSLRNGIIAVVMMGLLALTGCGGNQSQPPANDGANNGANGGEEKVLKIGSAIEYAPFE 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFD+D ++ + ++ + A+ + D + T Sbjct: 61 FMDEKQTPTGFDIDLMNEIAKDLGYTA---KFESSSFDGLVAAIGLGKYDAVISAMTITD 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R + F + Q + K I S L G + VQ GTT + + D Sbjct: 118 DRAK--SVLFSAPYFESAQIIAVKKGSAIKSEQDLKGKKVGVQQGTTGQFAVED------ 169 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + P F+ + + +A D LY N + I+P K Sbjct: 170 LGIDPRKFDTIGDAINDMMIGGSEAVVADTPTLYYFITQNPN-MDIEIIPSAFEKEYFGI 228 Query: 229 AIIQGDTEWYNIVSWTHY 246 A + E + V+ T Sbjct: 229 AFKLDNKELADQVNATLK 246 >gi|329124185|ref|ZP_08252732.1| polar amino acid ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus aegyptius ATCC 11116] gi|327467610|gb|EGF13108.1| polar amino acid ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus aegyptius ATCC 11116] Length = 273 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 84/249 (33%), Gaps = 13/249 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L + F++FS I ++K L G F +G GFD Sbjct: 17 MKKLLFTTALLTGAIAFSTFSHAGEIADRVEKTKTLLVGTEGTYAPFTFHDKSGKLTGFD 76 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R ++ + K+++ + L +K+ D+++ T E +F Sbjct: 77 VEVIRKVAEKLG---LKVEFKETQWDAMYAGLNAKRFDVIANQT--NPSPERLKKYSFTT 131 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + I S L G A + KA +V + + Sbjct: 132 PYNYSGGVIVTKSSDNSIKSFEDLKGRKSAQSATS----NWGKDAKAAG--AQILVVDGL 185 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R +A D A+ + I D K+P A A +QG+ Sbjct: 186 AQSLELIKQGRAEATINDKLAVLDYFKKHPNSG-LKIAYDRGDKTPTAFAFLQGEDALIT 244 Query: 240 IVSWTHYAM 248 + A+ Sbjct: 245 KFNQVLEAL 253 >gi|301055647|ref|YP_003793858.1| amino acid ABC transporter amino acid-binding protein [Bacillus anthracis CI] gi|300377816|gb|ADK06720.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus biovar anthracis str. CI] Length = 259 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 90/254 (35%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N K + L G + + V+A+ + G Sbjct: 1 MKKLLSISFALILIVSMFSACSNGEEKATGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVNF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFKVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|42783271|ref|NP_980518.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus ATCC 10987] gi|229174830|ref|ZP_04302350.1| Arginine-binding extracellular protein artP [Bacillus cereus MM3] gi|42739199|gb|AAS43126.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus ATCC 10987] gi|228608498|gb|EEK65800.1| Arginine-binding extracellular protein artP [Bacillus cereus MM3] Length = 259 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 99/283 (34%), Gaps = 26/283 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N K + L G + + V+A+ + G Sbjct: 1 MKKLLSISFALILIVSMFSACSNGEEKATGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIQSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFKVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + I + E Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMK--------------ELQGIEIKEAPEEVG 219 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDK 281 ++ + TAE + +K + V+++ G +K Sbjct: 220 AAIALPKNSDKTAEFNKVIKK---MQENGEMDKLVKKWFGSEK 259 >gi|311068999|ref|YP_003973922.1| high affinity arginine ABC transporter binding lipoprotein [Bacillus atrophaeus 1942] gi|310869516|gb|ADP32991.1| high affinity arginine ABC transporter binding lipoprotein [Bacillus atrophaeus 1942] Length = 255 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 95/255 (37%), Gaps = 11/255 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L + F + +S G + + G + F + + GFD Sbjct: 1 MKKWLL--LLVAACITFALSACGSSSSGSADGKKKIIMGTSADYKPFEYKDGD-NIVGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL+ + I+ ++ AL+SKQID++ T R+ + F Sbjct: 58 VDLAKALAKKAGYE---IEVQDMDFNSLITALKSKQIDMVLSGMTPTPERKK--QVDFSD 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y + K GI S+S L G ++ VQ G+ E + ++ K R+ Sbjct: 113 IYYTAHHMIVSKKDSGIDSLSDLKGKTVGVQLGSIQEEKGKELSPDYDFKTEDR--NRIS 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ ++ R DA + +N+ I ++ A A + D++ + Sbjct: 171 DLVQEIKSGRFDAAIIEDMVAEGYFNSNEDLQGFTIPDAKAEEAGSAIAFRK-DSDLTDK 229 Query: 241 VSWTHYAMVTAEELG 255 + M EL Sbjct: 230 FNKALKEMKDNGELD 244 >gi|299069322|emb|CBJ40588.1| putative amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum CMR15] Length = 280 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 92/249 (36%), Gaps = 13/249 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRAL 67 + L L SF A +I+K L+CG + FA + GFDVD C+AL Sbjct: 10 LTVLACLCAASFPVLADQWAEIQKNKELRCGTFADVPPFAAPDPKTREMVGFDVDLCQAL 69 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + + PL+ + R ++ ++D+ N +TL R + F Y + Sbjct: 70 AKHLG---VAARITPLSVEARVPEVKMGRVDVTVANLAYTLGRAEQIQ--FSDPYYLAKE 124 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + S + G + G+T+EL++ P+ F+ A + Sbjct: 125 MLAVRASDPGKSKADYKGKRLAAAKGSTSELSI------KMNGSEPVTFQDTGSAYMAVQ 178 Query: 188 AHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + L + E ++ + + P+ + +G+ V+ Sbjct: 179 QGKALGIVSNTMTITKLVNQSKTGGIELKVIAEPMIYQPIGVGMKKGEPALLAKVNEALL 238 Query: 247 AMVTAEELG 255 AM A E+ Sbjct: 239 AMDKAGEIN 247 >gi|299531960|ref|ZP_07045360.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni S44] gi|298720135|gb|EFI61092.1| amino-acid ABC transporter binding protein ybeJ precursor [Comamonas testosteroni S44] Length = 320 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 97/275 (35%), Gaps = 24/275 (8%) Query: 1 MYKDFFVSILCLIILFFTSFS--------------------TNASILGDIKKRGFLKCGI 40 M + L+ + + + L + G + G+ Sbjct: 3 MSLKWVGLAAALVCAGSAMAAGKTEAASSNIGSGIDTAVDLSASPTLQRWQAGGTVVLGV 62 Query: 41 NTGLVGFAE-VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 V + + AN + G+ +D C + AI ++++Y+ L + + + D Sbjct: 63 REAAVPMSYAIGANEKFVGYHMDLCERVVHAI-APRAQLKYMVLTPQNTMPLINNGTADF 121 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159 + L R+ + F TY + GI+S QL G ++ GTT Sbjct: 122 NCASMTNNLTRQKQVA--FGLTTYVSEVRMAVRVDSGITSFKQLQGRNVGAITGTTAVQI 179 Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 L Y + + + ++ + E + R DA+ D + L + + P + I+ + Sbjct: 180 LRKYASDNELNFKTLMSKDQFESFLMLESGRVDAFVLDDNMLAGVIGQSKNPKGYKIVGE 239 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 +I P+A + D + V M+ + EL Sbjct: 240 VIGAEPIAIQFSKDDPQIKKAVDGAILQMIRSGEL 274 >gi|229542707|ref|ZP_04431767.1| extracellular solute-binding protein family 3 [Bacillus coagulans 36D1] gi|229327127|gb|EEN92802.1| extracellular solute-binding protein family 3 [Bacillus coagulans 36D1] Length = 255 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 81/246 (32%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++ + S + KK L G + F G+ GFD Sbjct: 1 MKKIVLGIAIVFSMVIAAACGQTNSSKSNTKKEKTLIMGTSADFAPFETRDTAGNVVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D + ++ + ++ + ALQS ++D++ T R + F Sbjct: 61 ADLAKYIAKELGYK---LEIKDMKFDGLIGALQSHRVDMVLSGMSATKERAK--NVDFST 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + G+ F+ K + ++ L G ++ VQ GT E + + Sbjct: 116 PYHHSGEMFVTLKGSPVKTLDDLKGKTVGVQLGTIQEEGADKL--KGKYNFTVKKLDNST 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYN 239 + + R D S + V D S SP +A A+ +G ++ Sbjct: 174 NLIEELLSKRIQVAYLDKSVAEGYI----KKQNLVGFDDPTSSSPGMAVALPKG-SKLTA 228 Query: 240 IVSWTH 245 V+ Sbjct: 229 KVNKVL 234 >gi|299822124|ref|ZP_07054010.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] gi|299815653|gb|EFI82891.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] Length = 487 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 95/279 (34%), Gaps = 23/279 (8%) Query: 1 MYK----DFFVSILCLIILFFTS--FSTNASI---LGDIKKRGFLKCGINTGLVGFAE-- 49 M K F+++ S ++ A L I+K G L+ G++ + Sbjct: 1 MTKGKSTKLFIALAIFFTFLIPSIHAASAAETDPYLKKIQKNGELRVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 +K GFD+ ++ + P +N + AL++ +ID++ T Sbjct: 61 TIKGKDKIVGFDISIADKIAKDLKVKP---VITEMNFESLLGALKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 RE + F Q I+ K + S S G + Q TT E + Sbjct: 118 EREK--EVDFSDTYMRVDQKVIVRKVDQNKFKSTSDFQGVKVGAQKQTTQEELAQNEL-- 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + ++V +I +++ DA + A N + + + Sbjct: 174 --SGSTVMSLQKVPDIILNLTSNKIDAAVLEGPVADAYVSQNKALAYAKNVKFANGQKDT 231 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 A A+ +G T + V+ + + + L Q N+ Sbjct: 232 AIALPKGSTALQDKVNASIKDIKDSGALKKYQATANKQM 270 >gi|255994315|ref|ZP_05427450.1| glutamine ABC transporter, permease/substrate-binding protein [Eubacterium saphenum ATCC 49989] gi|255993028|gb|EEU03117.1| glutamine ABC transporter, permease/substrate-binding protein [Eubacterium saphenum ATCC 49989] Length = 259 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 79/254 (31%), Gaps = 7/254 (2%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K ++ + L FT + K L F +G+ GFD+ Sbjct: 6 KKVLIFTLAIVTALSFTGCGKKDDSSSE-KSAKKLVVATEPTFPPFDTTNKDGELDGFDM 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +A++ D I++ AL++ DI++ + E + F Sbjct: 65 DLMKAIAKDQNLD---IEFKSFEFDALIPALKAGNADIVAAGMNSNDG-ERKKQVDFSKT 120 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G ++ K I S+ T+ L + K + ++ + Sbjct: 121 YCDAGLVVMVKKDSKIKSIKDFKSNMKVASQTGTSGGKLIEKLKKQGKIADAVSMKKFDA 180 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +A D A +P + I+ ++ A A+ +G+ + + Sbjct: 181 CVLQLINGDVEAVIIDKPVGEAYLA--KKPGKTKIVGKTMNAEAYAFAVKKGNKDLLEKL 238 Query: 242 SWTHYAMVTAEELG 255 + A+ + E Sbjct: 239 NKGFEAIKKSGEFD 252 >gi|83718424|ref|YP_442093.1| amino acid ABC transporter periplasmic amino acid-binding protein [Burkholderia thailandensis E264] gi|167580939|ref|ZP_02373813.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis TXDOH] gi|167619034|ref|ZP_02387665.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis Bt4] gi|257138279|ref|ZP_05586541.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis E264] gi|83652249|gb|ABC36312.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis E264] Length = 266 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 80/250 (32%), Gaps = 16/250 (6%) Query: 1 MY--KDFFVSILCLIILF-FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F S L +L T+ + A +L +K+ G LK + F A+G + Sbjct: 1 MKAFKPMFTSALVAALLGIATASAHAADLLDSVKQAGVLKIALEGTYPPFDYRNADGQLE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD + +++ + P Q++ LQ+ + D++ T R L Sbjct: 61 GFDVDVAKEVAARLGVKP---QFVTTEWSGILAGLQAGKFDVIVNQVGITPAR--RQALD 115 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + I + L G I V GT AD K Sbjct: 116 FSQPYVYSAAQLIQRADDKHDYGAPGALQGKRIGVTLGT----NFADLAKTLQ-GVDVKT 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E A R D D L L P ++ + +G+ Sbjct: 171 YPGAPEKLRDVAAGRIDVSMDDRLMLPYLIKNAHMPLR-PGATIKGGETQMGIPFRKGNP 229 Query: 236 EWYNIVSWTH 245 ++ + Sbjct: 230 KFAKALDDAL 239 >gi|323977899|gb|EGB72985.1| extracellular solute-binding protein 3 [Escherichia coli TW10509] Length = 266 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 84/241 (34%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 14 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 74 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + L G + V GT E ++ + + ++ Sbjct: 129 IQALVKKGNEGSIKTADDLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242 Query: 245 H 245 Sbjct: 243 I 243 >gi|313893994|ref|ZP_07827560.1| putative histidine ABC transporter, periplasmic histidine-binding protein HisJ [Veillonella sp. oral taxon 158 str. F0412] gi|313441558|gb|EFR59984.1| putative histidine ABC transporter, periplasmic histidine-binding protein HisJ [Veillonella sp. oral taxon 158 str. F0412] Length = 270 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 91/270 (33%), Gaps = 17/270 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K V + + ++ F + + + + + G++ G+ GFD+ Sbjct: 4 KKMMAVGLAAVSMMVFVTGCGGDAKKANTELPKKVVIGLDDSFPPMGFKDDKGEIVGFDI 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + + ++++ ++ + L+SK+ID L + RE + F + Sbjct: 64 DLAKEAAKRAG---MEVEFKAIDWSSKEAELKSKKIDALWNGLTVSPEREK--NILFSNV 118 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 D Q I+ + I + L+G + VQ +T E L ++ + Sbjct: 119 YMKDKQYIIVRNEDESIKGKADLAGKVVGVQQASTGEAALQKD-ESGKTVKEIKSYADFV 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYN 239 R DA D A L P ++ I+ A + DT + Sbjct: 178 SAFMDLGIGRVDAVIADGVI--ARYLMTKEPGKYKIVEGTDYGVDDFAVGFRKEDTALRD 235 Query: 240 IVSWTH-------YAMVTAEELGITQKNIN 262 ++ A AE+ + +++ Sbjct: 236 KINGILAEMKKDGTADKIAEKWLGSGTDLD 265 >gi|293602700|ref|ZP_06685141.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292818891|gb|EFF77931.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 329 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 90/247 (36%), Gaps = 8/247 (3%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS--- 68 ++ T+ + S L I++ G + G V FA + N G+ V+ C+ ++ Sbjct: 39 MLGSAATAHAEGPSRLDKIRETGVITIGHPETSVPFAYLDGNQKPIGYTVEICQEVAQHI 98 Query: 69 -SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 +A+ +++Y P + R L + ID+ NT L R ++F P T+ Sbjct: 99 KAALKLPKLEVRYNPTTSATRIPLLANGTIDLECGNTTNNLDRHKL--VSFAPTTFVAQV 156 Query: 128 GFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + K G+ +++ G +I QAG T ++ N+ + E Sbjct: 157 VLVARKDGGVDPNNLESFRGKTIAAQAGGQTFRLISGLNAKGNLGITMAPTKDTAETILM 216 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + R D Y ++ P VI + +P + D + +V Sbjct: 217 VESGRAAGSANDDGIAYGAVASSKNPDAFVIGKKGLEMAPYGIMEPKDDPAFKKVVDEAV 276 Query: 246 YAMVTAE 252 ++ Sbjct: 277 IDLIKTG 283 >gi|90414857|ref|ZP_01222823.1| putative amino acid ABC transporter [Photobacterium profundum 3TCK] gi|90324035|gb|EAS40626.1| putative amino acid ABC transporter [Photobacterium profundum 3TCK] Length = 269 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 87/244 (35%), Gaps = 8/244 (3%) Query: 1 MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + ++ T + + S L DIK+RG L+ G++T V +A G+ GF Sbjct: 1 MKKLLAACLAVITLMMGTNALAAEKSTLIDIKERGTLRVGLST-FVPWAMRDKQGELVGF 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VD R L+ K++++P AL + + D++ T R ++ + F Sbjct: 60 EVDVARRLAKDAG---LKVEFIPTAWDGIIPALLAGKFDVIIGGLSITPQR--NMSVLFT 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G +K+K ++ V + K + K F+ Sbjct: 115 APYAHSGVQLAANKEKSADKLTIADYNKRSVTLSVRRGAFTVETAKKYFPKAKLRQFDDD 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A + + + L D +S+ A AI G+ + N Sbjct: 175 AQAFQEVLNGNAHAVLASSPKPEQMAIQY-NEKLFIPLTDRLSRGSEAFAIRHGEFDLLN 233 Query: 240 IVSW 243 + Sbjct: 234 FFNN 237 >gi|332161759|ref|YP_004298336.1| amino acid-binding periplasmic protein precursor [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665989|gb|ADZ42633.1| amino acid-binding periplasmic protein precursor [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 257 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 86/253 (33%), Gaps = 22/253 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F L+ S A + I G++ G F + +G+ GFD Sbjct: 1 MKKTF----AALLTGLILSAPVAAQTIETI------SFGVDGGYPPFDVLAPSGEITGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + +K ++ + AL +++ D + + T R+ + F Sbjct: 51 IDIANALCDNL---HAKCVFVKQPFESMIAALNARKFDAIIASLSITDERKK--EVDFTD 105 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K + V+ L G ++ VQ G+ E ++ + + Sbjct: 106 RYYRSAAQLVARKGSPLSPDVASLKGKTVGVQTGSIHETYAKKHWG--GQGVKIVSYANQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDT 235 + + + R +A D + + R + +I + A+ + + Sbjct: 164 DNVYLDLMSGRINASLQDNIQAASSFIDTPRGQKFAFAGPVIQDETISSDVGIAVGKDNP 223 Query: 236 EWYNIVSWTHYAM 248 + ++ A+ Sbjct: 224 ALRDALNGAIKAI 236 >gi|312967121|ref|ZP_07781339.1| cystine-binding periplasmic protein [Escherichia coli 2362-75] gi|312288585|gb|EFR16487.1| cystine-binding periplasmic protein [Escherichia coli 2362-75] Length = 255 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 84/241 (34%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 3 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 62 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 63 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 117 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + L G + V GT E ++ + + ++ Sbjct: 118 IQALVKKGNEGTIKTADDLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 173 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 174 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 231 Query: 245 H 245 Sbjct: 232 I 232 >gi|206971360|ref|ZP_03232311.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH1134] gi|206734132|gb|EDZ51303.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH1134] Length = 259 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 77/212 (36%), Gaps = 9/212 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N + L G + + V A+ + G Sbjct: 1 MKKLVSISFALILIVSIFSACSNGESKETKGNKKVLVMGTSADYKPYEYVDASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + EI +A R DA + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD 205 >gi|222081209|ref|YP_002540572.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725888|gb|ACM28977.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 278 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 94/257 (36%), Gaps = 16/257 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M L L + S NA L DI ++CG + FA + GF Sbjct: 3 MTSWTLSIALAATAL---AGSANADQLADIMTAKVIRCGTFADVPPFASPDPKTREMVGF 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C A++ A+ P P++ + R ++ +DI N +T+ R S + F Sbjct: 60 DVDLCGAIAQALGVKPE---IKPVSVEARVPEVKLGHVDIAVANLAYTVSR--SEQIQFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + I+ + +G + G+T+EL++ K P+ F+ Sbjct: 115 DPYYLAKEMLIVKVGDAGQKKADFAGVRLASTKGSTSELSIR------LNKSQPLTFQDT 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWY 238 A + + + + + + +E ++ + + P+ + + + Sbjct: 169 GSAYLAVQQGKARGMVANTMTTTKIVNESKTKGAEMRMIDEPMLYQPIGIGMKKDEPALT 228 Query: 239 NIVSWTHYAMVTAEELG 255 ++ ++ + E+ Sbjct: 229 AKINEVLVSLDKSGEIN 245 >gi|218689913|ref|YP_002398125.1| cystine transporter subunit [Escherichia coli ED1a] gi|218695527|ref|YP_002403194.1| cystine transporter subunit [Escherichia coli 55989] gi|260855900|ref|YP_003229791.1| putative periplasmic binding transport protein FliY [Escherichia coli O26:H11 str. 11368] gi|300822308|ref|ZP_07102449.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 119-7] gi|331683472|ref|ZP_08384073.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli H299] gi|218352259|emb|CAU98015.1| cystine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|218427477|emb|CAR08373.2| cystine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli ED1a] gi|257754549|dbj|BAI26051.1| putative periplasmic binding transport protein FliY [Escherichia coli O26:H11 str. 11368] gi|300525191|gb|EFK46260.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 119-7] gi|309702215|emb|CBJ01531.1| cystine ABC transporter, substrate-binding protein (sulfate starvation-induced protein 7) [Escherichia coli ETEC H10407] gi|323152747|gb|EFZ39019.1| cystine-binding periplasmic protein [Escherichia coli EPECa14] gi|323937195|gb|EGB33475.1| bacterial extracellular solute-binding protein 3 [Escherichia coli E1520] gi|331079687|gb|EGI50884.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli H299] Length = 266 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 85/243 (34%), Gaps = 13/243 (5%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 V + L+ + +L +K+RG L G+ F+ +G GF+V+F Sbjct: 12 MSVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFA 71 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + L+ + + P +L SK+ID++ + R+ F Sbjct: 72 QQLAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTI 126 Query: 125 DGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G ++ K I + + L G + V GT E ++ + + ++ Sbjct: 127 SGIQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTK 182 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 183 YQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVN 240 Query: 243 WTH 245 Sbjct: 241 DAI 243 >gi|16129867|ref|NP_416430.1| cystine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|74311733|ref|YP_310152.1| cystine transporter subunit [Shigella sonnei Ss046] gi|89108755|ref|AP_002535.1| cystine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|170081568|ref|YP_001730888.1| cysteine ABC transporter periplasmic substrate binding protein [Escherichia coli str. K-12 substr. DH10B] gi|191173292|ref|ZP_03034822.1| cystine-binding periplasmic protein [Escherichia coli F11] gi|218558778|ref|YP_002391691.1| cystine transporter subunit [Escherichia coli S88] gi|227885653|ref|ZP_04003458.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Escherichia coli 83972] gi|238901129|ref|YP_002926925.1| cystine transporter subunit [Escherichia coli BW2952] gi|256022422|ref|ZP_05436287.1| cystine transporter subunit [Escherichia sp. 4_1_40B] gi|300935896|ref|ZP_07150852.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 21-1] gi|300982289|ref|ZP_07175999.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 200-1] gi|300993929|ref|ZP_07180604.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 45-1] gi|301018230|ref|ZP_07182745.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 69-1] gi|306814256|ref|ZP_07448422.1| cystine transporter subunit [Escherichia coli NC101] gi|331657965|ref|ZP_08358927.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli TA206] gi|331663418|ref|ZP_08364328.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli TA143] gi|84028139|sp|P0AEN0|FLIY_ECOL6 RecName: Full=Cystine-binding periplasmic protein; Short=CBP; AltName: Full=Protein fliY; AltName: Full=Sulfate starvation-induced protein 7; Short=SSI7; Flags: Precursor gi|84028140|sp|P0AEM9|FLIY_ECOLI RecName: Full=Cystine-binding periplasmic protein; Short=CBP; AltName: Full=Protein fliY; AltName: Full=Sulfate starvation-induced protein 7; Short=SSI7; Flags: Precursor gi|687652|gb|AAC43545.1| FliY [Escherichia coli] gi|1736579|dbj|BAA15740.1| cystine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|1788228|gb|AAC74987.1| cystine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|73855210|gb|AAZ87917.1| putative periplasmic binding transport protein [Shigella sonnei Ss046] gi|169889403|gb|ACB03110.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|190906409|gb|EDV66018.1| cystine-binding periplasmic protein [Escherichia coli F11] gi|218365547|emb|CAR03274.1| cystine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|227837226|gb|EEJ47692.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Escherichia coli 83972] gi|238860698|gb|ACR62696.1| cystine transporter subunit [Escherichia coli BW2952] gi|281178982|dbj|BAI55312.1| cystine-binding periplasmic protein precursor [Escherichia coli SE15] gi|284921833|emb|CBG34906.1| cystine ABC transporter, substrate-binding protein (sulfate starvation-induced protein 7) [Escherichia coli 042] gi|294490653|gb|ADE89409.1| cystine-binding periplasmic protein [Escherichia coli IHE3034] gi|300307266|gb|EFJ61786.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 200-1] gi|300399817|gb|EFJ83355.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 69-1] gi|300406430|gb|EFJ89968.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 45-1] gi|300458915|gb|EFK22408.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 21-1] gi|305852415|gb|EFM52866.1| cystine transporter subunit [Escherichia coli NC101] gi|307553934|gb|ADN46709.1| cysteine transport protein ABC superfamily [Escherichia coli ABU 83972] gi|307626603|gb|ADN70907.1| cystine transporter subunit [Escherichia coli UM146] gi|315136557|dbj|BAJ43716.1| cystine-binding periplasmic protein [Escherichia coli DH1] gi|315286626|gb|EFU46059.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 110-3] gi|315290286|gb|EFU49664.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 153-1] gi|315296503|gb|EFU55800.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 16-3] gi|320194368|gb|EFW68999.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY [Escherichia coli WV_060327] gi|323165283|gb|EFZ51071.1| cystine-binding periplasmic protein [Shigella sonnei 53G] gi|323186800|gb|EFZ72120.1| cystine-binding periplasmic protein [Escherichia coli RN587/1] gi|323952415|gb|EGB48288.1| extracellular solute-binding protein 3 [Escherichia coli H252] gi|323956317|gb|EGB52060.1| extracellular solute-binding protein 3 [Escherichia coli H263] gi|323968337|gb|EGB63744.1| extracellular solute-binding protein 3 [Escherichia coli M863] gi|324013512|gb|EGB82731.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 60-1] gi|327253051|gb|EGE64705.1| cystine-binding periplasmic protein [Escherichia coli STEC_7v] gi|330911728|gb|EGH40238.1| cystine ABC transporter, periplasmic cystine-binding protein FliY [Escherichia coli AA86] gi|331056213|gb|EGI28222.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli TA206] gi|331059217|gb|EGI31194.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli TA143] Length = 266 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 84/241 (34%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 14 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 74 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + L G + V GT E ++ + + ++ Sbjct: 129 IQALVKKGNEGTIKTADDLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242 Query: 245 H 245 Sbjct: 243 I 243 >gi|55823084|ref|YP_141525.1| amino acid (glutamine) ABC transporter substrate-binding protein [Streptococcus thermophilus CNRZ1066] gi|55739069|gb|AAV62710.1| amino acid (glutamine) ABC transporter substrate-binding protein [Streptococcus thermophilus CNRZ1066] Length = 277 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 60/285 (21%), Positives = 111/285 (38%), Gaps = 27/285 (9%) Query: 2 YKDFF-----VSILCLIILFFTSFSTNA---------SILGDIKKRGFLKCGINTGLVGF 47 +K VS++ + T+ T A + I RG L G+ + F Sbjct: 3 FKKILRYLTAVSLVIATVFLITNHKTEAEDTSKLLDSKAVQKIVNRGTLNVGVKQDVPNF 62 Query: 48 AEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 A ++G +VD + ++ + K+ Y+P+ + R + + ID+L Sbjct: 63 GYYSAKTNRYEGMEVDLAKKIADEL---RVKVNYIPVTTQTREPLMDNGTIDLLIGTYTI 119 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ S + Y D GF++ K GI+ +S L+G +I V G +T+ L +Y A Sbjct: 120 NDERKASYAI--SNPYYRDQIGFLVLKDSGINKISDLNGKTIGVAQGASTKAALQEYASA 177 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 HN+K++ + E+ + AHR DA++ D S L + + IL + Sbjct: 178 HNLKFNYVQLGSYPELAVSLYAHRVDAFSVDKSILSGYESKKTK-----ILNEGFKTQDY 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG--ITQKNINQVSKDTT 269 A + + E + + L + N+ + Sbjct: 233 GIASSKSNQELIDYTNDLIAKWQKDGSLQKLYDKYNLKPAKAENK 277 >gi|54302943|ref|YP_132936.1| putative amino acid ABC transporter [Photobacterium profundum SS9] gi|46916371|emb|CAG23136.1| putative amino acid ABC transporter [Photobacterium profundum SS9] Length = 269 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 87/244 (35%), Gaps = 8/244 (3%) Query: 1 MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + ++ T + + S L DIK+RG L+ G++T V +A G+ GF Sbjct: 1 MKKLLAACLAVMTLMMGTNALAAEKSTLIDIKERGTLRVGLST-FVPWAMRDKQGELVGF 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VD R L+ K++++P AL + + D++ T R ++ + F Sbjct: 60 EVDVARRLAKDAG---LKVEFIPTAWDGIIPALLAGKFDVIIGGLSITPQR--NMSVLFT 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G +K+K ++ V + K + K F+ Sbjct: 115 SPYAHSGVQLAANKEKSADKLAIADYNKRSVTLSVRRGAFTVETAKKYFPKAKLRQFDDD 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A + + + L D +S+ A AI G+ + N Sbjct: 175 AQAFQEVLNGNAHAVLASSPKPEQMAIQY-NEKLFIPLTDRLSRGSEAFAIRHGEFDLLN 233 Query: 240 IVSW 243 + Sbjct: 234 FFNN 237 >gi|269127494|ref|YP_003300864.1| extracellular solute-binding protein family 3 protein [Thermomonospora curvata DSM 43183] gi|268312452|gb|ACY98826.1| extracellular solute-binding protein family 3 [Thermomonospora curvata DSM 43183] Length = 290 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 76/230 (33%), Gaps = 8/230 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + S+ K+ G L GI K +G ++GFDVD + ++ + + S I + Sbjct: 31 AESKSVAQRAKETGKLTIGIKFDQPALGLQKPDGTYEGFDVDVAKYIAKELGVEESGITW 90 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR-PITYFDGQGFIMHKKKGISS 139 ++ R L S Q+D++ T R + F P + I Sbjct: 91 KEARSENRESFLASNQVDLVVATYSITEGR--KPKVTFAGPYYVAHQDTMVRADNDDIKK 148 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER---VEEIDAAYRAHRCDAYTG 196 + L G +C AG+ + + D + + + DA T Sbjct: 149 AADLKGKKLCKAAGSNSWRRITDPPPDGQLNIKDVELVDATGYSDCVTKLDNGALDAVTT 208 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 D L ++ D + I +GDTE V+ Sbjct: 209 DDLILAGFASQQKGK--FKVINDPFTDEKYGVGIKKGDTETCEAVNKAIT 256 >gi|157371176|ref|YP_001479165.1| cystine transporter subunit [Serratia proteamaculans 568] gi|157322940|gb|ABV42037.1| extracellular solute-binding protein family 3 [Serratia proteamaculans 568] Length = 265 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 81/248 (32%), Gaps = 15/248 (6%) Query: 2 YKDFFVSI--LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + + + L T ++L +K G L G+ F+ +G GF Sbjct: 6 RRQLLLGVMSVALTAGLSTQTYAADNLLEQVKHHGTLVVGLEGTYPPFSFQGEDGKLTGF 65 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VDF AL+ + + P +L SK+ID++ + R+ F Sbjct: 66 EVDFANALAQHLGVKA---KLNPTKWDGMLASLDSKRIDVVINQVTISPERQK--KYDFS 120 Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G ++ K I+ L G + V GT E L D + ++ Sbjct: 121 TPYTVSGIQALVKKGNEGTITKPEDLKGKKVGVGLGTNYEQWLRD----NVQGVDVRTYD 176 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R R +A D L AL L + S+ A+ + + E Sbjct: 177 DDPTKYQDLRVGRINAILVDR--LAALDLVKKTGDTLAVAGPAFSRQESGVAVRKNNPEL 234 Query: 238 YNIVSWTH 245 ++ Sbjct: 235 LAAINQAI 242 >gi|16760900|ref|NP_456517.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141408|ref|NP_804750.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|167552818|ref|ZP_02346569.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168244801|ref|ZP_02669733.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168259762|ref|ZP_02681735.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194444067|ref|YP_002041219.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448487|ref|YP_002046005.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|198244762|ref|YP_002215132.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205352351|ref|YP_002226152.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856532|ref|YP_002243183.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213053509|ref|ZP_03346387.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213426352|ref|ZP_03359102.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213616254|ref|ZP_03372080.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213650341|ref|ZP_03380394.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855801|ref|ZP_03384041.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289824076|ref|ZP_06543674.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25296353|pir||AD0750 cystine-binding periplasmic protein precursor [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503197|emb|CAD05703.1| cystine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi] gi|29137035|gb|AAO68599.1| cystine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|194402730|gb|ACF62952.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194406791|gb|ACF67010.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197939278|gb|ACH76611.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205272132|emb|CAR36985.1| cystine-binding periplasmic protein (FliY) [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205322644|gb|EDZ10483.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205336345|gb|EDZ23109.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205350934|gb|EDZ37565.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708335|emb|CAR32638.1| cystine-binding periplasmic protein (FliY) [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326622881|gb|EGE29226.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627401|gb|EGE33744.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 266 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 83/254 (32%), Gaps = 20/254 (7%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M V + L+ + +L +K+RG L G+ F+ + Sbjct: 1 MKLALLGRQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDD 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+VDF AL+ + P +L SK+ID++ + +R+ Sbjct: 61 GKLTGFEVDFAEALAKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDVRKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I + + L G + V GT E L + Sbjct: 117 -KYDFSTPYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGV 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + D S+ A+ Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALR 229 Query: 232 QGDTEWYNIVSWTH 245 +G+ + V Sbjct: 230 KGNEDLLKAVDNAI 243 >gi|149181554|ref|ZP_01860049.1| Arginine-binding protein [Bacillus sp. SG-1] gi|148850804|gb|EDL64959.1| Arginine-binding protein [Bacillus sp. SG-1] Length = 251 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 95/264 (35%), Gaps = 14/264 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + ++ + T+ G+ K+ + G + F NG+ GFD Sbjct: 1 MKKLFAGLMAVVVAGSLAACGTSEETSGEGKE--KIIMGTSADFPPFETRDNNGEIIGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + + ++ +N ALQ+ +D ++ T R+ + F Sbjct: 59 IDLAKHITEELGYE---LEIKDMNFDGLIGALQADTVDFVASGMSATDERKE--NVDFSV 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + G+ FI + I S+ L G I VQ GT + ++ + +++ Sbjct: 114 EYHRSGEMFITLPESEIESMDDLEGTKIGVQLGTIQDTAAQKLAES--IDIEVKALDKLP 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYN 239 + +A R DA D + + D S SP +A A +G + Sbjct: 172 ALIQELKAGRIDAIYLDKTVAEGYI----KEVNLKGFDDESSVSPGMAMAFPKGSDKVEE 227 Query: 240 IVSWTHYAMVTAEELGITQKNINQ 263 E + +K + + Sbjct: 228 FSKVIEEMKENGELKKLEEKWLKE 251 >gi|94987196|ref|YP_595129.1| amino acid ABC transporter periplasmic protein [Lawsonia intracellularis PHE/MN1-00] gi|94731445|emb|CAJ54808.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Lawsonia intracellularis PHE/MN1-00] Length = 249 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 84/247 (34%), Gaps = 20/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M FV IL L F NA +G L +T L+ F G++ GFD Sbjct: 1 MKYKIFVFILGLFFTNTFGFFANA--------KG-LVVAHDTNLMPFEFKDKEGNFVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ ++ + P++ LQ+ IDI T R + F Sbjct: 52 IELWEHIAE---IANIPYTFQPMDFNGIIPGLQTGSIDIAISGMTITPERAKV--ILFSQ 106 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ ++ IS + L G ++ V+ GT++ D+ K+ + +F Sbjct: 107 PYYESGLMILVRAGEESISKLEDLVGKTVGVKTGTSSV----DFMKSFGKQRSLKLFPTN 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + DA D L + + ++ P P A + E Sbjct: 163 DGMFFDLMTGGVDAVVFDAPVLQYFASSAGKGKVKLVGPK-YKGQPYGIAFRKNSEELVQ 221 Query: 240 IVSWTHY 246 V+ Sbjct: 222 KVNTALN 228 >gi|327482800|gb|AEA86110.1| periplasmic binding protein [Pseudomonas stutzeri DSM 4166] Length = 251 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 83/253 (32%), Gaps = 22/253 (8%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++ +I+ +F+ L+ G F + A+G G Sbjct: 1 MKSYKKILLTAAASLIIGTQAFAAE-----------KLRIGTEGAYPPFNLIDASGKVVG 49 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D AL + + + + + + AL + + D L+ + T R+ + F Sbjct: 50 FDLDISHALCAKMKVE---CEVVTSDWDGIIPALNAGKFDFLAASMSVTEERK--NAVDF 104 Query: 119 RPITYFDGQGFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y + F+ K + L G I Q T L D + +++ Sbjct: 105 TDHYYTNKLQFVAPKNIDFKTDESYLKGKVIGAQRATIAGTWLEDNL---DRVVDIKLYD 161 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R D D + ++ + + +A A+ +G+ E Sbjct: 162 TQENAYLDLASGRVDGILADTFVQWEWLKSDAGKNFEFKGEPVFDDDKIAIAVRKGNDEL 221 Query: 238 YNIVSWTHYAMVT 250 ++ ++ Sbjct: 222 RERLNKALAEIIA 234 >gi|331668614|ref|ZP_08369462.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli TA271] gi|331063808|gb|EGI35719.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli TA271] Length = 262 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 85/241 (35%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 14 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 74 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + + L G + V GT E ++ + + ++ Sbjct: 129 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242 Query: 245 H 245 Sbjct: 243 I 243 >gi|258621393|ref|ZP_05716427.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio mimicus VM573] gi|258586781|gb|EEW11496.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio mimicus VM573] Length = 281 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 88/254 (34%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + + K+ ++ GI F+ +A+G KGFD Sbjct: 24 MKKWLVATALIATTISGVTQA---------KEWKTVRFGIEGAYPPFSWTEADGSLKGFD 74 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + + +P + +L +++ D + T R+ + F Sbjct: 75 VDMANALCTEMKVE---CKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 129 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +I K + + L G I VQ TT + ++D + + + Sbjct: 130 KYALIPNKYIAKKGANLAFTKEGLKGVKIGVQRATTHDKYISDNY---GDSVDIVRYGSF 186 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E R A GD SAL L + + ++ A+ + D Sbjct: 187 DEAYLDLANGRIAAVLGDASALEEGVLNKAGGDAYEFVGPSLTDPKWFGEGFGIAVRKQD 246 Query: 235 TEWYNIVSWTHYAM 248 + ++ ++ Sbjct: 247 KDLTEKLNAAITSL 260 >gi|206976335|ref|ZP_03237243.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus H3081.97] gi|217961645|ref|YP_002340215.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH187] gi|222097602|ref|YP_002531659.1| amino acid ABC transporter , amino acid-binding protein [Bacillus cereus Q1] gi|229140888|ref|ZP_04269433.1| Arginine-binding extracellular protein artP [Bacillus cereus BDRD-ST26] gi|206745531|gb|EDZ56930.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus H3081.97] gi|217068283|gb|ACJ82533.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH187] gi|221241660|gb|ACM14370.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus Q1] gi|228642678|gb|EEK98964.1| Arginine-binding extracellular protein artP [Bacillus cereus BDRD-ST26] Length = 259 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 99/283 (34%), Gaps = 26/283 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N K + L G + + V+A+ + G Sbjct: 1 MKKLLSISFALILIVSMFSACSNGEEKATGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFKVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + I + E Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMK--------------ELQGIEIKEAPEEVG 219 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDK 281 ++ + TAE + +K + V+++ G +K Sbjct: 220 AAIALPKNSDKTAEFNKVIKK---MQENGEMDKLVKKWFGSEK 259 >gi|34499508|ref|NP_903723.1| amino acid ABC transporter periplasmic protein [Chromobacterium violaceum ATCC 12472] gi|34105358|gb|AAQ61713.1| probable amino acid ABC transporter, periplasmic-binding protein [Chromobacterium violaceum ATCC 12472] Length = 261 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 81/250 (32%), Gaps = 18/250 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + S + A +L +K+RG LK + F A GFD Sbjct: 1 MKKWKAVLLLTAV----GSHAFAADLLDTVKQRGALKIALEGTYPPFNFKDAKQQLTGFD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ ++ + P ++ LQS + DI+ T R+ F Sbjct: 57 VEIATEIARRMKVKPE---FVTAEWSGLLAGLQSGKFDIVVNQVGVTAQRQAV--FDFSQ 111 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + I+ K + +++ L G + V G+ AD KA + Sbjct: 112 PYTYSSAQLIVRKNESRDFKNLADLKGKKLGVGQGS----NYADMAKAA-AGVQVKTYPG 166 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E R DA D + P + + +A +G+ ++ Sbjct: 167 APEYLQDLATGRLDAALNDSLLIPFAIKQAKLP--LKAGAPVGEVAAMAIPFAKGNPQFK 224 Query: 239 NIVSWTHYAM 248 + + M Sbjct: 225 SEIDKALGGM 234 >gi|218699516|ref|YP_002407145.1| cystine transporter subunit [Escherichia coli IAI39] gi|218369502|emb|CAR17269.1| cystine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI39] Length = 266 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 83/241 (34%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 14 VMAVALVAGMSVKSFAEEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 74 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + L G + V GT E ++ + + ++ Sbjct: 129 IQALVKKGNEGTIKTADDLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242 Query: 245 H 245 Sbjct: 243 I 243 >gi|146284415|ref|YP_001174568.1| periplasmic binding protein [Pseudomonas stutzeri A1501] gi|145572620|gb|ABP81726.1| probable periplasmic binding protein [Pseudomonas stutzeri A1501] Length = 251 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 84/253 (33%), Gaps = 22/253 (8%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++ +I+ +F+ L+ G F + A+G G Sbjct: 1 MKSYKKILLTAAASLIIGTQAFAAE-----------KLRIGTEGAYPPFNLIDASGKVVG 49 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D AL + + + + + + AL + + D L+ + T R+ + F Sbjct: 50 FDLDISHALCAKMKVE---CEVVTSDWDGIIPALNAGKFDFLAASMSVTEERK--NAVDF 104 Query: 119 RPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y + F+ K + S L G I Q T L D + +++ Sbjct: 105 TDHYYTNKLQFVAPKNVDFKTDESYLKGKVIGAQRATIAGTWLEDNL---DRVVDIKLYD 161 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R D D + ++ + + +A A+ +G+ E Sbjct: 162 TQENAYLDLASGRVDGILADTFVQWEWLKSDAGKNFEFKGEPVFDDDKIAIAVRKGNDEL 221 Query: 238 YNIVSWTHYAMVT 250 ++ ++ Sbjct: 222 RERLNKALAEIIA 234 >gi|146312153|ref|YP_001177227.1| cystine transporter subunit [Enterobacter sp. 638] gi|145319029|gb|ABP61176.1| L-cystine-binding protein / Diaminopimelate-binding protein [Enterobacter sp. 638] Length = 266 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 81/254 (31%), Gaps = 20/254 (7%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M V + L+ +L +K+RG L G+ F+ + Sbjct: 1 MKLALLGRQALMGVMAVALVAGLSMKTFAAEGLLNKVKERGTLLVGLEGTYPPFSFQGDD 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+V+F L+ + P +L SK+ID++ + R+ Sbjct: 61 GKLTGFEVEFAEELAKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I + + L G + V GT E ++ + + Sbjct: 117 -KYDFSTPYTVSGIQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGV 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + + S+ AI Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKDTLAVAGEPFSRQESGVAIR 229 Query: 232 QGDTEWYNIVSWTH 245 + + + + Sbjct: 230 KDNDDLVKAIDGAI 243 >gi|259907901|ref|YP_002648257.1| Histidine-binding periplasmic protein [Erwinia pyrifoliae Ep1/96] gi|224963523|emb|CAX55013.1| Histidine-binding periplasmic protein [Erwinia pyrifoliae Ep1/96] gi|283477778|emb|CAY73694.1| Histidine ABC transport system, periplasmic component [Erwinia pyrifoliae DSM 12163] gi|310768188|gb|ADP13138.1| Histidine-binding periplasmic protein [Erwinia sp. Ejp617] Length = 260 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 81/254 (31%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + I S L+ G + F A G GFD Sbjct: 1 MKKQVLALSLLMAITAAGSAFAAGP--------KTLRIGTDPTYAPFEMKNAQGQLTGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + +K ++ + +L++K++D + + T R +AF Sbjct: 53 IDLANEICQRM---ETKCTFVESDFDALIPSLKAKKVDAIISSLSITAKR--QQEIAFSE 107 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I +++ L G +I + GTT E ++ + P + Sbjct: 108 KLYAANSRLIAPKGSKIEPTLASLKGKTIGLLQGTTQETYANQNWRPKGVTVTP--YANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + A R DA D A L ++ + + + + + Sbjct: 166 DLVYQDLTAGRIDAAFQDEVAASEGFLKQPAGKDYAFAGPAVKDENIFGVGTGIGLSKDN 225 Query: 235 TEWYNIVSWTHYAM 248 E + + M Sbjct: 226 PELKSAIDKAFDEM 239 >gi|33592470|ref|NP_880114.1| putative amino-acid ABC transporter, periplasmic amino acid-binding protein [Bordetella pertussis Tohama I] gi|33572116|emb|CAE41656.1| putative amino-acid ABC transporter, periplasmic amino acid-binding protein [Bordetella pertussis Tohama I] Length = 262 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 72/241 (29%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + + L+ L + A L IK G +K G F+ A+ GFDV+ RA Sbjct: 8 LLLAGLVPLAMIGTAVQADDLAAIKAAGVIKIGTEGTYAPFSYHDASNKLTGFDVEIGRA 67 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + ++ L K+ D + T R+ F Sbjct: 68 IAQKLGVKAE---FVEGKWDGLIAGLDVKRYDAVINQVGITDARKA--KYDFSDPYISSQ 122 Query: 127 QGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 I+ + I S + L G T+ LA + A + + E Sbjct: 123 AALIVREDNQAIKSFADLKGRKSA-NTLTSNFGKLAQSYGA-----EVVPVQGFNEAIDL 176 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIVSWT 244 + R +A D + K V D S I + + E ++ Sbjct: 177 LMSGRVEATVNDNLSFLDFKKQKPNAKVKVAAYDKSKEFSESGVLIRKNNPELQAAINKA 236 Query: 245 H 245 Sbjct: 237 L 237 >gi|253582493|ref|ZP_04859715.1| amino acid-binding protein [Fusobacterium varium ATCC 27725] gi|251835638|gb|EES64177.1| amino acid-binding protein [Fusobacterium varium ATCC 27725] Length = 246 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 89/249 (35%), Gaps = 17/249 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + +L ++++ + T+ + K G N F + N G D Sbjct: 1 MKKLFKLFMLTVLLVLAAACGTSKT--EQAKDNKVYVIGTNAEYPPFEYL-ENDQVCGLD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D A++ + + ++ N ALQ+K++D++ T R + F Sbjct: 58 ADIISAIAQKL---NIQYKWSNTNFDGLIPALQTKKMDVVIAGMSITPERAK--AVNFSI 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 FI +K K I+ + L + + GTT E A F Sbjct: 113 PYLSSNVAFIANKNKPINGIEDLENKNFGAELGTTKEAAARKIKGA-----TVTPFSSNT 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A ++ + DA D S A+K + P ++L + P A A + DTE Sbjct: 168 GALVALKSSKIDAIVLDES--VAVKFVENNPE--LMLVGTLEGEPKAIAFNKDDTELMEK 223 Query: 241 VSWTHYAMV 249 + ++ Sbjct: 224 FNKALQELI 232 >gi|299535150|ref|ZP_07048475.1| cystine-binding periplasmic protein precursor [Lysinibacillus fusiformis ZC1] gi|298729467|gb|EFI70017.1| cystine-binding periplasmic protein precursor [Lysinibacillus fusiformis ZC1] Length = 265 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 77/249 (30%), Gaps = 12/249 (4%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGD---IKKRGFLKCGINTGLVGFAEVKANGDW 56 M + +L +I+ S+ + + GI+ D Sbjct: 1 MKRVVTLFMMLTAVIVLAACGSSKEKTAEKDETAADQEKMIIGIDDKFAPMGFRDDKNDI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D RA + + + + P++ K + L S +ID++ T R+ + Sbjct: 61 VGFDIDLARAAAEHMGVEAE---FQPIDWKTKEAELLSGRIDLIWNGYTITDERKE--KV 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + Q I I+ +S L+G + +Q+ ++ L H F Sbjct: 116 LFTKPYLENSQVVITKADSKITKLSDLAGQEVGIQSLSSAADALN-GNPIHKEVKKMTEF 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R DA D +L + ++ + G+ Sbjct: 175 ADNVLALSDLKTGRVDAVVIDAVVAEYYMTQEPN--TFKLLEESLAPEQYGIGVKPGNEA 232 Query: 237 WYNIVSWTH 245 + Sbjct: 233 LLEKLQAAL 241 >gi|299529975|ref|ZP_07043402.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni S44] gi|298721955|gb|EFI62885.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni S44] Length = 307 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 90/232 (38%), Gaps = 6/232 (2%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC-RALS---SAIFDDPSKIQYL 81 L I+ G + G+ + NG + GF V+ C +AL+ + I+Y Sbjct: 24 TLDRIRDTGVVTMGVREASGTMSYTLGNGKYAGFHVELCEKALARMQQQLKLPRLDIRYQ 83 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + A+ R + + +D+ T R+ + F P Y + + K GI+ V+ Sbjct: 84 MVTAQNRVPLVANGTVDVECGTTTNNAARQKEVA--FAPTVYMEEVRTAVRKNSGITEVA 141 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G ++ G T L + K + ++ ++ + E R DA D L Sbjct: 142 QLKGRNVAATTGATAVTLLRRFSKEKGVDFNVLMAKDNAECFILLETGRADACVADGQIL 201 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + P ++ I+ + S P+A + + E+ + M ++ E Sbjct: 202 ASGLSRLRDPGQYAIVGEPFSVEPIAIMLDRKSPEFKKLFDAQIRGMASSGE 253 >gi|229075861|ref|ZP_04208837.1| Arginine-binding extracellular protein artP [Bacillus cereus Rock4-18] gi|228707176|gb|EEL59373.1| Arginine-binding extracellular protein artP [Bacillus cereus Rock4-18] Length = 259 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 92/254 (36%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N + + + L G + + V+A+ + G Sbjct: 1 MKKLLSISFALILIVSMFSACSNGDVKEENGNKKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDIDIAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ K + K +R Sbjct: 116 TDIYFVAKNMIVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEFKKQVDFKAEGR--DR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAILEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|224583545|ref|YP_002637343.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224468072|gb|ACN45902.1| cystine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 266 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 83/254 (32%), Gaps = 20/254 (7%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M V + L+ + +L +K+RG L G+ F+ + Sbjct: 1 MKLALLGRQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGED 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+VDF AL+ + P +L SK+ID++ + +R+ Sbjct: 61 GKLTGFEVDFAEALAKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDVRKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I + + L G + V GT E L + Sbjct: 117 -KYDFSTPYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGV 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + D S+ A+ Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALR 229 Query: 232 QGDTEWYNIVSWTH 245 +G+ + V Sbjct: 230 KGNEDLLKAVDNAI 243 >gi|302534451|ref|ZP_07286793.1| sugar binding protein [Streptomyces sp. C] gi|302443346|gb|EFL15162.1| sugar binding protein [Streptomyces sp. C] Length = 336 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 81/232 (34%), Gaps = 10/232 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + + I+K G L G++ + +G GFD+D +A++ I + + Y Sbjct: 84 DGPAIERIRKAGKLVAGVDQNSFKWGYRNPDGHLDGFDIDLVKAIAKDILGNEDLVIYRA 143 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + +R ALQ ++DI+ R R +AF + GQ + K I+ Sbjct: 144 IPTSQRVPALQEGRVDIVVRTMTINCKR--LEDVAFSTAYFEAGQQVLAPKGSPITGYDA 201 Query: 143 -LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G IC AG+T E L K+ + + + + + D + Sbjct: 202 SLKGRRICTAAGSTAEAAL----KSQSYGSVGVSVANQLDCLVRLQLGEVEGIITDNALA 257 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + ++ ++ A+ + ++ V+ E Sbjct: 258 AGQAAQDP---SVQLVGAPFTREFYGVAMNKDASDLVRRVNKVLENYRAGGE 306 >gi|289643954|ref|ZP_06476056.1| extracellular solute-binding protein family 3 [Frankia symbiont of Datisca glomerata] gi|289506230|gb|EFD27227.1| extracellular solute-binding protein family 3 [Frankia symbiont of Datisca glomerata] Length = 254 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 85/222 (38%), Gaps = 10/222 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L I RG+L G+ F V + G+++GFDVD + +F P +++ + Sbjct: 11 PALRRIFDRGYLIVGVRPDTPPFGSVNPDTGEFEGFDVDIANLVGRWLFGAPRHVRFRAI 70 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 A +R + +ID+ + + T + L + F + Y G ++ + S++ L Sbjct: 71 TAAQRLPLVAQGEIDLSTGSLTATC--DRLLEVDFATVYYMTATGLLVSRDSNYHSLADL 128 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G +C +GTT+ + + P V + A + + D L Sbjct: 129 GGRKVCAASGTTSLQAIENEP----SHPIPYPVSNVADCLIALQDGEVEGIVNDEMVLAG 184 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L P HV+ D P+ + + + + V+ Sbjct: 185 LAAQ--DPRTHVVNADRFD-QPITAGVSKDNPDLTAFVNGVL 223 >gi|304398823|ref|ZP_07380693.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] gi|304353527|gb|EFM17904.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] Length = 257 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 82/241 (34%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + LI ++L IK+RG L G+ F+ G GF+V+F Sbjct: 5 VMAVALIAGVNVKTFAAENLLNKIKERGTLLVGLEGTYPPFSFQDEKGKLTGFEVEFAEQ 64 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + P +L +K+ID++ + R+ F G Sbjct: 65 LAQHMGVKA---SLKPTKWDGMLASLDAKRIDVVINQVTISDERKK--KYDFSTPYTVSG 119 Query: 127 QGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + K I+ + L+G + V GT E L + K ++ Sbjct: 120 IQALTMKANASTITKPADLAGKKVGVGLGTNYEQWLRENVK----GVDIRTYDDDPTKYQ 175 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R+ R +A D L AL L + D S+ A+ +G+ + V+ Sbjct: 176 DLRSGRLNAILVDR--LAALDLVKKTGDTMAVAGDAFSRQESGVAMRKGNDDLLKAVNQA 233 Query: 245 H 245 Sbjct: 234 I 234 >gi|238756657|ref|ZP_04617947.1| Cystine-binding periplasmic protein [Yersinia ruckeri ATCC 29473] gi|238705126|gb|EEP97553.1| Cystine-binding periplasmic protein [Yersinia ruckeri ATCC 29473] Length = 257 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 79/245 (32%), Gaps = 15/245 (6%) Query: 5 FFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + ++ + + + +L +K+RG L G+ F+ +G GF+VD Sbjct: 1 MVLGMMAVALATGLNVKSYAAGDLLDQVKQRGILIVGLEGTYPPFSFQGEDGKLTGFEVD 60 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 F AL+ + + P +L+SK+ID+ + F Sbjct: 61 FANALAQHMGVKA---KLQPTKWDGMLASLESKRIDVAINQVTI--SADRKKKYDFSTPY 115 Query: 123 YFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G + K + L G + V G+ E L +A+ ++ Sbjct: 116 TLSGIQVLTKKGNEGQFTKPEDLQGKKVGVGLGSNYEQWL----RANLKGVDIRTYDDDP 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 R R DA D L AL L V ++ A+ + + E Sbjct: 172 TKYQDLRIGRTDAILVDR--LAALDLVKKTGDTLVAAGPAFARQESGVALRKNNPELLAA 229 Query: 241 VSWTH 245 ++ Sbjct: 230 INQAI 234 >gi|15802355|ref|NP_288381.1| cystine transporter subunit [Escherichia coli O157:H7 EDL933] gi|15831913|ref|NP_310686.1| cystine transporter subunit [Escherichia coli O157:H7 str. Sakai] gi|168751846|ref|ZP_02776868.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4113] gi|168758231|ref|ZP_02783238.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4401] gi|168771524|ref|ZP_02796531.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4486] gi|168783314|ref|ZP_02808321.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4076] gi|168802264|ref|ZP_02827271.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC508] gi|189405428|ref|ZP_02815331.2| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC869] gi|195939224|ref|ZP_03084606.1| cystine transporter subunit [Escherichia coli O157:H7 str. EC4024] gi|208810217|ref|ZP_03252093.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4206] gi|208817069|ref|ZP_03258189.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4045] gi|208821419|ref|ZP_03261739.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4042] gi|209396748|ref|YP_002271034.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4115] gi|217329017|ref|ZP_03445098.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. TW14588] gi|254793570|ref|YP_003078407.1| cystine transporter subunit [Escherichia coli O157:H7 str. TW14359] gi|261227585|ref|ZP_05941866.1| extracellular solute-binding protein family 3 [Escherichia coli O157:H7 str. FRIK2000] gi|261255815|ref|ZP_05948348.1| extracellular solute-binding protein family 3 [Escherichia coli O157:H7 str. FRIK966] gi|291283097|ref|YP_003499915.1| Cystine-binding periplasmic protein [Escherichia coli O55:H7 str. CB9615] gi|12516018|gb|AAG56935.1|AE005414_12 putative periplasmic binding transport protein [Escherichia coli O157:H7 str. EDL933] gi|13362127|dbj|BAB36082.1| putative periplasmic binding transport protein [Escherichia coli O157:H7 str. Sakai] gi|188014185|gb|EDU52307.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4113] gi|188999320|gb|EDU68306.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4076] gi|189354911|gb|EDU73330.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4401] gi|189359726|gb|EDU78145.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4486] gi|189370199|gb|EDU88615.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC869] gi|189375717|gb|EDU94133.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC508] gi|208724733|gb|EDZ74440.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4206] gi|208731412|gb|EDZ80101.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4045] gi|208741542|gb|EDZ89224.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4042] gi|209158148|gb|ACI35581.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4115] gi|209766998|gb|ACI81811.1| putative periplasmic binding transport protein [Escherichia coli] gi|209767000|gb|ACI81812.1| putative periplasmic binding transport protein [Escherichia coli] gi|209767002|gb|ACI81813.1| putative periplasmic binding transport protein [Escherichia coli] gi|209767004|gb|ACI81814.1| putative periplasmic binding transport protein [Escherichia coli] gi|209767006|gb|ACI81815.1| putative periplasmic binding transport protein [Escherichia coli] gi|217318364|gb|EEC26791.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. TW14588] gi|254592970|gb|ACT72331.1| cystine transporter subunit; periplasmic-binding component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|290762970|gb|ADD56931.1| Cystine-binding periplasmic protein [Escherichia coli O55:H7 str. CB9615] gi|320191895|gb|EFW66542.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY [Escherichia coli O157:H7 str. EC1212] gi|320641768|gb|EFX11156.1| cystine transporter subunit [Escherichia coli O157:H7 str. G5101] gi|320647128|gb|EFX15961.1| cystine transporter subunit [Escherichia coli O157:H- str. 493-89] gi|320652411|gb|EFX20709.1| cystine transporter subunit [Escherichia coli O157:H- str. H 2687] gi|320658013|gb|EFX25775.1| cystine transporter subunit [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658585|gb|EFX26279.1| cystine transporter subunit [Escherichia coli O55:H7 str. USDA 5905] gi|320668483|gb|EFX35310.1| cystine transporter subunit [Escherichia coli O157:H7 str. LSU-61] gi|326342329|gb|EGD66110.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY [Escherichia coli O157:H7 str. 1044] gi|326344835|gb|EGD68582.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY [Escherichia coli O157:H7 str. 1125] Length = 266 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 84/241 (34%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + LI + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 14 VMAVALIAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 74 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + L G + V GT E ++ + + ++ Sbjct: 129 IQALVKKGNEGTIKTADDLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242 Query: 245 H 245 Sbjct: 243 I 243 >gi|149003286|ref|ZP_01828182.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS69] gi|225861334|ref|YP_002742843.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae Taiwan19F-14] gi|237649206|ref|ZP_04523458.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae CCRI 1974] gi|237821815|ref|ZP_04597660.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae CCRI 1974M2] gi|298230584|ref|ZP_06964265.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255879|ref|ZP_06979465.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503236|ref|YP_003725176.1| amino acid ABC superfamily transporter ATP-binding protein [Streptococcus pneumoniae TCH8431/19A] gi|147758746|gb|EDK65743.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS69] gi|225726532|gb|ACO22383.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae Taiwan19F-14] gi|298238831|gb|ADI69962.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pneumoniae TCH8431/19A] gi|327389684|gb|EGE88029.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus pneumoniae GA04375] Length = 278 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K V + + LF + T+ + + G ++ V + +G Sbjct: 1 MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D A+ + + P++ + L ID++ T R Sbjct: 61 YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172 +AF + Q + K GI++ ++G ++ QAG++ + Sbjct: 116 VAFSNSYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEANPEILKNIVANKE 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++ E + R D D +++ + + A + Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGSRK 235 Query: 233 GDTEWYNIVSWT 244 DT ++ Sbjct: 236 EDTTLVKKINEA 247 >gi|15901347|ref|NP_345951.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae TIGR4] gi|15903396|ref|NP_358946.1| amino acid ABC transporter amino acid-binding protein [Streptococcus pneumoniae R6] gi|116515532|ref|YP_816790.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae D39] gi|148992615|ref|ZP_01822283.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP9-BS68] gi|168489661|ref|ZP_02713860.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae SP195] gi|168492570|ref|ZP_02716713.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae CDC0288-04] gi|225857126|ref|YP_002738637.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae P1031] gi|225859258|ref|YP_002740768.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae 70585] gi|14972989|gb|AAK75591.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae TIGR4] gi|15459000|gb|AAL00157.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae R6] gi|116076108|gb|ABJ53828.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae D39] gi|147928632|gb|EDK79646.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP9-BS68] gi|183571997|gb|EDT92525.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae SP195] gi|183573309|gb|EDT93837.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae CDC0288-04] gi|225721472|gb|ACO17326.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae 70585] gi|225726140|gb|ACO21992.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae P1031] gi|332072292|gb|EGI82775.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus pneumoniae GA17570] Length = 278 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K V + + LF + T+ + + G ++ V + +G Sbjct: 1 MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D A+ + + P++ + L ID++ T R Sbjct: 61 YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172 +AF + Q + K GI++ ++G ++ QAG++ + Sbjct: 116 VAFSNSYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEANPEILKNIVANKE 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++ E + R D D +++ + + A + Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARK 235 Query: 233 GDTEWYNIVSWT 244 DT ++ Sbjct: 236 EDTNLVKKINEA 247 >gi|332074249|gb|EGI84726.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus pneumoniae GA17545] Length = 278 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K V + + LF + T+ + + G ++ V + +G Sbjct: 1 MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D A+ + + P++ + L ID++ T R Sbjct: 61 YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172 +AF + Q + K GI++ ++G ++ QAG++ + Sbjct: 116 VAFSNSYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEANPEILKNIVANKE 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++ E + R D D +++ + + A + Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARK 235 Query: 233 GDTEWYNIVSWT 244 DT ++ Sbjct: 236 EDTNLVKKINEA 247 >gi|217032569|ref|ZP_03438059.1| hypothetical protein HPB128_172g32 [Helicobacter pylori B128] gi|216945774|gb|EEC24398.1| hypothetical protein HPB128_172g32 [Helicobacter pylori B128] Length = 190 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 11/184 (5%) Query: 4 DFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + L LI L F++ S + L IK+RG LK G+ + F V + G ++G+ Sbjct: 8 KMWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGY 67 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV + ++ + D +KI+++P+ A R L++ ++DI+ N T RE + F Sbjct: 68 DVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFA 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G I K I ++ +L + V GTT + F + + FE+ Sbjct: 126 KPYMKVALGVIS-KDGVIKNIEELKDKELIVNKGTTADFY----FTKNYPNIKLLKFEQN 180 Query: 180 EEID 183 E Sbjct: 181 TETF 184 >gi|300904807|ref|ZP_07122634.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 84-1] gi|301305261|ref|ZP_07211358.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 124-1] gi|300403275|gb|EFJ86813.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 84-1] gi|300839467|gb|EFK67227.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 124-1] gi|315257249|gb|EFU37217.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 85-1] Length = 266 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 86/241 (35%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V ++ L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 14 VMVVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 74 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + + L G + V GT E ++ + + ++ Sbjct: 129 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242 Query: 245 H 245 Sbjct: 243 I 243 >gi|261750336|ref|ZP_05994045.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5 str. 513] gi|261740089|gb|EEY28015.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5 str. 513] Length = 256 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 81/248 (32%), Gaps = 15/248 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +++ A K+ ++ F + +G GFD Sbjct: 1 MKSLVLAGLASVVLTVSVQAPVQA------KEWKEIRIASEGAYPPFNYMSPDGKLVGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ALS A+ +K + + LQ+ + D + + T R+ + F Sbjct: 55 LDIANALSEAM---EAKCTIVANDWDGMIPGLQANKFDAVIASMAITDERKKQVA--FTD 109 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y ++ K I S S +G + QAGTT D + ++ Sbjct: 110 RYYTTPLAVVVPKDSDIVSLEPSAFAGKMVGAQAGTTQGNYADDVYGKAGAD--VKLYPT 167 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E +A + R DA D + S++ +A A+ QGD + Sbjct: 168 ADEANADLESGRLDALAADKFIAADWLKKQGADCCKFLGDIPGSETQIAVALRQGDDDLR 227 Query: 239 NIVSWTHY 246 + Sbjct: 228 EQFNAAIK 235 >gi|195977959|ref|YP_002123203.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974664|gb|ACG62190.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 270 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 31/253 (12%), Positives = 76/253 (30%), Gaps = 16/253 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAE---VKANGD 55 M + ++ + +L + I++ G L ++ F V Sbjct: 3 MKRLLVGALAMVSVLALAACGQTNKTSLQDRIQENGKLVVAVSPDYAPFEFKALVDGKDT 62 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G D++ +A++ + ++ +N +LQ+ + DI +T R Sbjct: 63 IVGADIELAQAIADELGVK---LELSAMNFDNVLSSLQTGKADIAISGLSYTKERAKV-- 117 Query: 116 LAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F Y ++ ++ L+G + VQ G+ E + + N Sbjct: 118 YDFSEAYYETENAILVKASDAKRYANKDSLAGKKVAVQKGSIEEGLVKEQLNKANC---- 173 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + E ++ + A + + + A A+ +G Sbjct: 174 VSLTVMGEAINELKSGQVQAVDLEAPVAAGFLAQHKDLALAPFKLQTGDGDAKAVAMPKG 233 Query: 234 DTEWYNIVSWTHY 246 + ++ Sbjct: 234 SDDLRQTINKVIK 246 >gi|221232213|ref|YP_002511366.1| putative amino acid ABC transporter,extracellular amino acid-binding protein [Streptococcus pneumoniae ATCC 700669] gi|220674674|emb|CAR69247.1| putative amino acid ABC transporter,extracellular amino acid-binding protein [Streptococcus pneumoniae ATCC 700669] gi|301802221|emb|CBW34971.1| putative amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus pneumoniae INV200] Length = 278 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K V + + LF + T+ + + G ++ V + +G Sbjct: 1 MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D A+ + + P++ + L ID++ T R Sbjct: 61 YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172 +AF + Q + K GI++ ++G ++ QAG++ + Sbjct: 116 VAFSNSYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEANPELLKNIVANKE 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++ E + R D D +++ + + A + Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARK 235 Query: 233 GDTEWYNIVSWT 244 DT ++ Sbjct: 236 EDTNLVKKINEA 247 >gi|168263667|ref|ZP_02685640.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|198245988|ref|YP_002214793.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197940504|gb|ACH77837.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205347748|gb|EDZ34379.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 248 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 82/245 (33%), Gaps = 20/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSLLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K ID+ T R+ + F Sbjct: 53 LWDAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ I SV L G + V++GT + DY KA+ F ++ Sbjct: 108 YKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSV----DYTKANIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + + + A +G E V Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGESLEAQQYGVAFPKGSDELREKV 222 Query: 242 SWTHY 246 + Sbjct: 223 NGALK 227 >gi|228909990|ref|ZP_04073810.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis IBL 200] gi|228849507|gb|EEM94341.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis IBL 200] Length = 259 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 89/254 (35%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N K L G + + V+A+ + G Sbjct: 1 MKKLLSISFALILIVSIFSACSNGEEKATGKSEKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|218283494|ref|ZP_03489484.1| hypothetical protein EUBIFOR_02074 [Eubacterium biforme DSM 3989] gi|218215762|gb|EEC89300.1| hypothetical protein EUBIFOR_02074 [Eubacterium biforme DSM 3989] Length = 260 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 78/253 (30%), Gaps = 15/253 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++ ++ L I+ +G + G+ F+ + G D Sbjct: 1 MKKLLAGLLSTTMVFTLVGCGSSKDHLATIQDKGEITIGLEGDWQPFSYHDKDDKLVGVD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ + ++ + + ++ L + D++ D T RE F Sbjct: 61 VEVAKNIAKKLGVKANIVEGK---WDGLLTGLSTGTYDLVINGVDITKEREK--KFDFST 115 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +D ++ I+S L G + G+T D + + Sbjct: 116 PYAYDHTVLVVRNDNTTITSFGDLKGKTTANSIGSTYMELGED------YGATVKGVDDL 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE--W 237 + ++ DA +++ T S I+ +P A +++GD Sbjct: 170 TKCMDLVKSGGVDATINAATSINDYLQTTKDSS-FKIVDQSKESTPYAIPMVKGDDNASL 228 Query: 238 YNIVSWTHYAMVT 250 V+ + Sbjct: 229 KKAVNKALKELKE 241 >gi|194434955|ref|ZP_03067198.1| cystine-binding periplasmic protein [Shigella dysenteriae 1012] gi|194416790|gb|EDX32916.1| cystine-binding periplasmic protein [Shigella dysenteriae 1012] gi|320178179|gb|EFW53156.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY [Shigella boydii ATCC 9905] Length = 255 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 85/241 (35%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 3 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 62 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 63 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 117 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + + L G + V GT E ++ + + ++ Sbjct: 118 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 173 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 174 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 231 Query: 245 H 245 Sbjct: 232 I 232 >gi|116514325|ref|YP_813231.1| amino acid ABC transporter periplasmic protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093640|gb|ABJ58793.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 295 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 79/229 (34%), Gaps = 8/229 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77 S S K+ + G+ F G +GF++D A++ I SK Sbjct: 39 CSSKQESSYARAKQSKQITWGVRPDTKLFGLTNIKTGKIEGFEIDLATAITKQILGPKSK 98 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + P+ K R L + +D + T R + F + + + I+ K I Sbjct: 99 AVFRPITEKTRITLLHNGSLDAVISTMTITKER--MKVIDFSDVYFNANESMIVKKSSKI 156 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S++ L+ + V A T+ +A+ K F+ A +A + D D Sbjct: 157 RSIADLNKKGVVVIAIKGTD--VANQVAKLASKASVKQFDDYGSAFNALKAGQGDVMIDD 214 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 L L E + +++ P + +G TE ++ Sbjct: 215 NGILAGLIANTP---EFTLTKASLAEEPYGIGVEKGQTEMRQAINQALK 260 >gi|89258357|gb|ABD65400.1| putative periplasmic substrate binding protein [Ochrobactrum anthropi] Length = 261 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 76/229 (33%), Gaps = 11/229 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L IK G LK ++ F V + GFD A++ + P I Sbjct: 26 QADDLEKIKASGELKIAMSGQYPPFNFVNEKNEVVGFDASIGSAIAERMQLKPQLIT--- 82 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L++ + D + + T RE + F Y G+ + + + + Sbjct: 83 TAWDGIVAGLRAGKFDTVVGSMTITPEREK--AVDFVGPYYHAGRAVFVKEDSAVQKLDD 140 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA-YTGDISAL 201 L G ++ V G T E + ++ + E+ + R DA +I + Sbjct: 141 LKGKTLGVTLGETHEKWAR-----SQGGWTIRTYKGLPELMLELNSGRVDAIVVDNIPVM 195 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A+K T + + + AI + + E + ++ Sbjct: 196 VAIKETGQKVRKLDTPDIEGGSVAIGIAIRKNNPELKAAMQKALDEIMA 244 >gi|257461155|ref|ZP_05626253.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257441529|gb|EEV16674.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 270 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 100/243 (41%), Gaps = 16/243 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F +++ C I A+ L +I++ G ++ G+ G +E NG ++GF+ Sbjct: 1 MRSLFILALFCASIF--------ANTLDEIRQAGVIRVGVREGRPPLSESN-NGKFEGFE 51 Query: 61 VDFCRALSSAIFDD-PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++ +++ IF D ++Q++ + A ER L++ ++D++ T R+ + F Sbjct: 52 IELASSIAKDIFGDKKGEVQFVAVTAGERIPFLKNNKVDMVIGTFMITQERKK--QVDFS 109 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G + K+ + +Q+ I ++ ++ + + + + + Sbjct: 110 LPYLSVNFGIVTRKEDQVKDFAQVRDMRISIEKN--PNGSMTERYLRKEKFSNLVYCKNT 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + R D Y D + A + + V ++ + L + +G+ + Sbjct: 168 SECYAMMKDGRADGYANDNIIVLAYAVV--DDTLEVPFKNLGAAEFLGVGVQKGNQSLLD 225 Query: 240 IVS 242 ++ Sbjct: 226 FIN 228 >gi|320353114|ref|YP_004194453.1| PAAT family amino acid ABC transporter substrate-binding protein [Desulfobulbus propionicus DSM 2032] gi|320121616|gb|ADW17162.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfobulbus propionicus DSM 2032] Length = 248 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 87/247 (35%), Gaps = 19/247 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ + + C ++LF S S L GI+ FA + G GFD Sbjct: 1 MLRNALLILACALMLFSGSASAAT----------KLVNGIDANFPPFAFIDKTGAPSGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ ++ + + + P+ +L +K+IDI++ T R + F Sbjct: 51 VEAMNWIAKDMG---VAVSHQPIEWDGIITSLLTKKIDIIASGMSITPDRAK--QVNFTL 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASI-CVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q + K ++ + LSG I VQ GT+ L + A + + Sbjct: 106 PYWVIKQVMVTKKGSPLTIDAILSGKKILGVQQGTSEAKWLKEQAAAKGWNFELRYYNSS 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA D + + V+ + + A+ +GD E + Sbjct: 166 PLAVEDLLNGRIDAAAMDDAPAKDAAAKKE---VQVLGTFGMEQEEFGYAVRKGDQELLD 222 Query: 240 IVSWTHY 246 V+ + Sbjct: 223 KVNASLK 229 >gi|259908946|ref|YP_002649302.1| Arginine-binding periplasmic protein 1 [Erwinia pyrifoliae Ep1/96] gi|224964568|emb|CAX56081.1| Arginine-binding periplasmic protein 1 [Erwinia pyrifoliae Ep1/96] gi|283478952|emb|CAY74868.1| Arginine ABC transport system, periplasmic component [Erwinia pyrifoliae DSM 12163] gi|310767151|gb|ADP12101.1| Arginine-binding periplasmic protein 1 [Erwinia sp. Ejp617] Length = 243 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 84/249 (33%), Gaps = 25/249 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L L ++ ++ F + AN +GFD Sbjct: 1 MKKIVIAALLAGFSLSASASQ-------------TIRFAAEASYPPFEFIDANNKIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I D + +L+ ++ D + D T RE + F Sbjct: 48 VDLANALCREIDAD---CTFTNQAFDSLIPSLKFRRFDAVMSGMDITPEREK--QVLFTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K ++SV L G + VQ GTT + +A+ + ++ + Sbjct: 103 AYYDNSALFITQKG-KVTSVDALKGKRVGVQNGTTHQKYIAEKLP----DVKVVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + R DA GD + + + P + + K+ + ++ + Sbjct: 158 NAILDLKNGRIDAVFGDTAVVNEWL--KNNPELAPLGDKVTDKTYFGSGLGIAVSQSNSE 215 Query: 241 VSWTHYAMV 249 + A + Sbjct: 216 LQGKLNAAL 224 >gi|91789327|ref|YP_550279.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91698552|gb|ABE45381.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 266 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 86/260 (33%), Gaps = 15/260 (5%) Query: 1 MY-----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K F + L + + L D+ K + I T + V + Sbjct: 1 MKLPQLSKRLFSLSMMSAALLVAAGVQAQTALDDVMKAKKITIAIPTDFPPYGFVGPDLK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G D+D +++ + + I+ P+++ R LQ+++ D++ RE Sbjct: 61 PQGLDIDMANYIAAKLGVE---IELTPVSSANRVPYLQTRKADLVISTLGKNAEREKV-- 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F Q K I S + LSG SI V G + L A Sbjct: 116 IDFTAAYSPFFQAVFAPKSMSIKSFADLSGKSIGVTRGAIEDQELTKLAPA---GADIKR 172 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 FE +++ A + S A + P ++ SP + +G+ Sbjct: 173 FEDNNATVSSFVAGQVQLIATGAS--VAGNMMAKNPKLAAEYKLLLKDSPNFIGVGKGED 230 Query: 236 EWYNIVSWTHYAMVTAEELG 255 + V+ A ++ Sbjct: 231 KLRLKVNEIIATGKKAGDID 250 >gi|298369229|ref|ZP_06980547.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria sp. oral taxon 014 str. F0314] gi|298283232|gb|EFI24719.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria sp. oral taxon 014 str. F0314] Length = 271 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 92/257 (35%), Gaps = 11/257 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ C + N + + G+N F + G+ +GFD Sbjct: 3 MKKWIIAAVACSALALGACGGQNKNS-SAANPYKVYRVGMNAEFAPFESQTSEGNVEGFD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ A K+++ + F +L + IDI+ T R+ + F Sbjct: 62 VDLMNAMAKA---GNFKVEFKHQPWESLFPSLGNGDIDIVISGVTITDERK--QSMDFSD 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ K K ++S L + V G T + +++ + N FE V Sbjct: 117 PYFEITQVVLVPKGKKVASSDDLKNMAKVGVVTGQTGDFSVSKLLGSDN--PKISRFETV 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I D+ D + + N + + + LPD S A+ +GD Sbjct: 175 PLIIKELENGGLDSVVSDSAVIANYVKNNPTKGLDFITLPD-FSVENYGIAVRKGDEAAV 233 Query: 239 NIVSWTHYAMVTAEELG 255 +++ + + E Sbjct: 234 KMLNDALKKVRESGEYD 250 >gi|311108429|ref|YP_003981282.1| L-cystine-binding protein TcyA [Achromobacter xylosoxidans A8] gi|310763118|gb|ADP18567.1| L-cystine-binding protein TcyA [Achromobacter xylosoxidans A8] Length = 260 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 77/256 (30%), Gaps = 18/256 (7%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + FV+ L + + + + L IK G K G F A+G G Sbjct: 1 MKLFRTLFVAGLVQVAALSAAHAQSG--LDQIKSAGVFKIGTEGTYAPFTFHDASGQLTG 58 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD RA++ + Q++ L +K+ D + T R F Sbjct: 59 FDVDIGRAIAERLGVKA---QFVEGKWDGLIAGLDAKRYDAVINQVGITDARRA--KYDF 113 Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 I+ I S L G T+ LA A I + Sbjct: 114 SDPYISSAAVLIVRDDNTSIKSFDDLKGKKSA-NTLTSNFGKLAQQHGA-----EVIAVQ 167 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTE 236 E + R +A D + K + D S I +G+ E Sbjct: 168 GFNEAIDLLTSGRVEATVNDNLSFLDFKKQKPNAKVKIAATDKTAEFSNSGVLIRKGNPE 227 Query: 237 WYNIVSWTHYAMVTAE 252 ++ A + A+ Sbjct: 228 LQAAINKAL-ADIKAD 242 >gi|320010776|gb|ADW05626.1| extracellular solute-binding protein family 3 [Streptomyces flavogriseus ATCC 33331] Length = 344 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 77/242 (31%), Gaps = 15/242 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73 + + + I+KRG L G++ + + +GFD+D A++ I Sbjct: 69 ASLPARDADGPNIQKIRKRGKLIAGVDQNSFQWGYRNPESRTLEGFDIDLVHAIAEDILG 128 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 D + + + +R AL++ ++D++ R R +AF + GQ + K Sbjct: 129 DRDAVIFRAIPTNQRIAALENDKVDVVVRTMTINCRR--IGQVAFSTAYFQAGQQVLAPK 186 Query: 134 KKGISSVSQ-LSGASICVQAGTTTELTLA---------DYFKAHNMKYHPIVFERVEEID 183 I ++ L G +C G+T L D + + Sbjct: 187 TSTIDGYNESLKGKRVCTAEGSTAYDALKEKSFGAVYEDEHDGTGQDEDLLTVPNQLDCL 246 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + DA D + P+ + + A G + V+ Sbjct: 247 VRLQLGEVDAIVTDNALAAGQAAQ--DPAVELKGDKPFTTEYYGVAAKLGADDLVARVNH 304 Query: 244 TH 245 Sbjct: 305 VL 306 >gi|172063856|ref|YP_001811507.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171996373|gb|ACB67291.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 259 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 87/246 (35%), Gaps = 22/246 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + + ++ G F A+G +G + Sbjct: 1 MRKLLQSLCVGAALLGSVAHAEQ-----------VVRVGTLADYAPFEYKDASGKLQGME 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + K Q++ ++ AL++KQID + T RE + F Sbjct: 50 IDIGKKMCDTM---KVKCQWVTMDFDALIPALKAKQIDAVLAQMSKTPERE--QSVDFTR 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I + + GI+ + L G +I VQ +T E L A + V++ + Sbjct: 105 IFTTAPVQLVAKQGSGITDNAATLRGKTIGVQTASTHESYLRRRLPASKSGINVKVYQTL 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +E A R DA D + Y R + I+ + + A A+ +GD Sbjct: 165 DEAWLDLEAGRVDAVFADNTVAYDWLTKAGRKEGFDFVGKPIADAEIFGDGTAIAVRKGD 224 Query: 235 TEWYNI 240 + Sbjct: 225 APLKAL 230 >gi|301029372|ref|ZP_07192468.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 196-1] gi|299877727|gb|EFI85938.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 196-1] Length = 285 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 85/243 (34%), Gaps = 13/243 (5%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 V + L+ + +L +K+RG L G+ F+ +G GF+V+F Sbjct: 31 MSVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFA 90 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + L+ + + P +L SK+ID++ + R+ F Sbjct: 91 QQLAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTI 145 Query: 125 DGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G ++ K I + + L G + V GT E ++ + + ++ Sbjct: 146 SGIQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTK 201 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 202 YQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVN 259 Query: 243 WTH 245 Sbjct: 260 DAI 262 >gi|255659155|ref|ZP_05404564.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Mitsuokella multacida DSM 20544] gi|260848605|gb|EEX68612.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Mitsuokella multacida DSM 20544] Length = 261 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 81/258 (31%), Gaps = 15/258 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKK--RGFLKCGINTGLVGFAEVKA-NGDWKG 58 K F + C+ + + LK G + F +++G Sbjct: 4 KKLFVLLAACVFATLALAGCGGSDSASSGSGSSAKVLKVGSSIDFAPFEFQDEGQKEYQG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D RA+ + + ++ + ALQ+K ID++ R ++F Sbjct: 64 FDMDLIRAIGKEMGYE---VEVQNIGFDGLIPALQAKNIDVIISGMTINDER--KQNVSF 118 Query: 119 RPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G ++ + I S L G + VQ GTT+ + Sbjct: 119 SDPYYQSGLTMVVRSDEQAIKSFQDLKGHKVAVQIGTTSVEAVKKL-----GGVEVKELN 173 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + H DA D + + L + ++ A+ + +TE Sbjct: 174 TPADCFMELKGHGVDAVVNDRPVNDYYITKSGE-TGVKALEEKLTAEDYGIALAKDNTEL 232 Query: 238 YNIVSWTHYAMVTAEELG 255 + ++ + E Sbjct: 233 QSKINEALKKLKENGEYD 250 >gi|163735254|ref|ZP_02142689.1| amino-acid ABC transporter, periplasmic binding protein [Roseobacter litoralis Och 149] gi|161391468|gb|EDQ15802.1| amino-acid ABC transporter, periplasmic binding protein [Roseobacter litoralis Och 149] Length = 278 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 56/247 (22%), Positives = 104/247 (42%), Gaps = 11/247 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + F +++ I++ + A L IK+ G L G T + + N + KG+ Sbjct: 2 RPLFAALIAAILM---PAAAQAQTLERIKENGQLVIGFRTDAAPLSYLGEN-EPKGYTPT 57 Query: 63 FC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C +++A+ +I + P+ A+ RF + + ID+L TL R + F Sbjct: 58 VCYVLASKIAAAVELPDMEIIFRPVTAENRFEEVANGNIDLLCGAATITLER--RELVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y DG ++ K S+ +L+G + V++ TTT L + A ++ +VF+ Sbjct: 116 SVPVYVDGTVVVLKKDGP-ESLDELAGMKVGVRSATTTLDALQNSLNAADIAAEVVVFDD 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 AA AY D S L + ++ + + +++ A+ +GDTE+ Sbjct: 175 HPTGMAALEQDEITAYFADQSILMNMVAQSEVADDLKVFDQLLTVEKQGLAMARGDTEFR 234 Query: 239 NIVSWTH 245 IV Sbjct: 235 LIVDRGL 241 >gi|150019590|ref|YP_001311844.1| extracellular solute-binding protein [Clostridium beijerinckii NCIMB 8052] gi|149906055|gb|ABR36888.1| extracellular solute-binding protein, family 3 [Clostridium beijerinckii NCIMB 8052] Length = 278 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 49/232 (21%), Positives = 86/232 (37%), Gaps = 14/232 (6%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPS 76 S+NAS L IK +G L G + + V GFD+D + ++ + + Sbjct: 36 TSSNASALQAIKSKGKLVIGTSADYPPYEFHKEVDGKDKIVGFDIDIAQEIAKDLGVE-- 93 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 ++ + +ALQS +ID++ T R F I Y F++ Sbjct: 94 -LEVKDMAFDGLLVALQSDKIDMVFAGMTPTDER--KQNADFSDIYYTATHRFVLRSGDE 150 Query: 137 --ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+ + L I VQ G+ E D F A N ++V ++ + ++ DA Sbjct: 151 AGITKMEDLKNKKIGVQKGSIQEGIAKDNFDAAN----IKSLDKVTDLILDLKNNKVDAV 206 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + N+ + L A A+ +G T+ + V+ T Sbjct: 207 LAEQPVAQINVDKNEGIAIADKLEVKDPDGGSAIAMKKGSTDLTDQVNKTIK 258 >gi|162419996|ref|YP_001607785.1| amino acid ABC transporter periplasmic amino acid-binding protein [Yersinia pestis Angola] gi|162352811|gb|ABX86759.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis Angola] Length = 262 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 90/244 (36%), Gaps = 12/244 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L+++ + + A L I++RG L+ + F V + +G+D+ Sbjct: 4 KKRMLWLWAVLVLV--QAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L+ + K+Q + + + R LQ+ ++D++ + RE +AF Sbjct: 62 DMAQYLADKM---KLKLQLVSVTSANRVPYLQTDKVDLVISSLGKNPEREK--AIAFSRA 116 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G K + QL+G +I V G ++ L++ +E Sbjct: 117 YEPFFLGVFGAKDDELKQPEQLAGKTIGVTRGAVEDMVLSEIAPKA---AQIRRYEDNNT 173 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +AY + + + + AL P + + ++ SP + QG+ V Sbjct: 174 TLSAYLSGQVNYLATGNLVISALARQ--NPKQAPVAKFMLKDSPCYIGLRQGEPALKAKV 231 Query: 242 SWTH 245 Sbjct: 232 DALI 235 >gi|52141344|ref|YP_085485.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus E33L] gi|51974813|gb|AAU16363.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus E33L] Length = 259 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 90/254 (35%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N K + L G + + V+A+ + G Sbjct: 1 MKKLLSISFALILIVSMFSACSNGEEKTTGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFKVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|82543612|ref|YP_407559.1| cystine transporter subunit [Shigella boydii Sb227] gi|110805893|ref|YP_689413.1| cystine transporter subunit [Shigella flexneri 5 str. 8401] gi|187732594|ref|YP_001879709.1| cystine transporter subunit [Shigella boydii CDC 3083-94] gi|188491699|ref|ZP_02998969.1| cystine-binding periplasmic protein [Escherichia coli 53638] gi|191168309|ref|ZP_03030102.1| cystine-binding periplasmic protein [Escherichia coli B7A] gi|193066396|ref|ZP_03047444.1| cystine-binding periplasmic protein [Escherichia coli E22] gi|193071146|ref|ZP_03052070.1| cystine-binding periplasmic protein [Escherichia coli E110019] gi|194429921|ref|ZP_03062431.1| cystine-binding periplasmic protein [Escherichia coli B171] gi|194439567|ref|ZP_03071640.1| cystine-binding periplasmic protein [Escherichia coli 101-1] gi|218554504|ref|YP_002387417.1| cystine transporter subunit [Escherichia coli IAI1] gi|218705415|ref|YP_002412934.1| cystine transporter subunit [Escherichia coli UMN026] gi|260844324|ref|YP_003222102.1| putative periplasmic binding transport protein FliY [Escherichia coli O103:H2 str. 12009] gi|293405406|ref|ZP_06649398.1| cystine transporter subunit [Escherichia coli FVEC1412] gi|293410279|ref|ZP_06653855.1| cystine transporter subunit [Escherichia coli B354] gi|293415231|ref|ZP_06657874.1| cystine transporter subunit [Escherichia coli B185] gi|293446302|ref|ZP_06662724.1| cystine transporter subunit [Escherichia coli B088] gi|298381050|ref|ZP_06990649.1| cystine transporter subunit [Escherichia coli FVEC1302] gi|300818656|ref|ZP_07098864.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 107-1] gi|300899174|ref|ZP_07117452.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 198-1] gi|300917362|ref|ZP_07134031.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 115-1] gi|300925013|ref|ZP_07140936.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 182-1] gi|300951544|ref|ZP_07165378.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 116-1] gi|300956564|ref|ZP_07168845.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 175-1] gi|301327710|ref|ZP_07220916.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 78-1] gi|301645561|ref|ZP_07245491.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 146-1] gi|307138587|ref|ZP_07497943.1| cystine transporter subunit [Escherichia coli H736] gi|309795970|ref|ZP_07690383.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 145-7] gi|81245023|gb|ABB65731.1| putative periplasmic binding transport protein [Shigella boydii Sb227] gi|110615441|gb|ABF04108.1| putative periplasmic binding transport protein [Shigella flexneri 5 str. 8401] gi|187429586|gb|ACD08860.1| cystine-binding periplasmic protein [Shigella boydii CDC 3083-94] gi|188486898|gb|EDU62001.1| cystine-binding periplasmic protein [Escherichia coli 53638] gi|190901681|gb|EDV61437.1| cystine-binding periplasmic protein [Escherichia coli B7A] gi|192925981|gb|EDV80627.1| cystine-binding periplasmic protein [Escherichia coli E22] gi|192955541|gb|EDV86020.1| cystine-binding periplasmic protein [Escherichia coli E110019] gi|194412010|gb|EDX28322.1| cystine-binding periplasmic protein [Escherichia coli B171] gi|194421476|gb|EDX37490.1| cystine-binding periplasmic protein [Escherichia coli 101-1] gi|218361272|emb|CAQ98856.1| cystine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI1] gi|218432512|emb|CAR13405.1| cystine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli UMN026] gi|222033661|emb|CAP76402.1| Cystine-binding periplasmic protein [Escherichia coli LF82] gi|257759471|dbj|BAI30968.1| putative periplasmic binding transport protein FliY [Escherichia coli O103:H2 str. 12009] gi|291323132|gb|EFE62560.1| cystine transporter subunit [Escherichia coli B088] gi|291427614|gb|EFF00641.1| cystine transporter subunit [Escherichia coli FVEC1412] gi|291432879|gb|EFF05858.1| cystine transporter subunit [Escherichia coli B185] gi|291470747|gb|EFF13231.1| cystine transporter subunit [Escherichia coli B354] gi|298278492|gb|EFI20006.1| cystine transporter subunit [Escherichia coli FVEC1302] gi|300316627|gb|EFJ66411.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 175-1] gi|300357211|gb|EFJ73081.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 198-1] gi|300415408|gb|EFJ98718.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 115-1] gi|300418832|gb|EFK02143.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 182-1] gi|300449219|gb|EFK12839.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 116-1] gi|300528828|gb|EFK49890.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 107-1] gi|300845754|gb|EFK73514.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 78-1] gi|301076170|gb|EFK90976.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 146-1] gi|308120420|gb|EFO57682.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 145-7] gi|320176076|gb|EFW51144.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY [Shigella dysenteriae CDC 74-1112] gi|320184749|gb|EFW59541.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY [Shigella flexneri CDC 796-83] gi|323158596|gb|EFZ44610.1| cystine-binding periplasmic protein [Escherichia coli E128010] gi|323174566|gb|EFZ60187.1| cystine-binding periplasmic protein [Escherichia coli LT-68] gi|323378203|gb|ADX50471.1| extracellular solute-binding protein family 3 [Escherichia coli KO11] gi|323940417|gb|EGB36608.1| extracellular solute-binding protein 3 [Escherichia coli E482] gi|323948199|gb|EGB44187.1| bacterial extracellular solute-binding protein 3 [Escherichia coli H120] gi|323961969|gb|EGB57568.1| extracellular solute-binding protein 3 [Escherichia coli H489] gi|323972717|gb|EGB67918.1| extracellular solute-binding protein 3 [Escherichia coli TA007] gi|324118974|gb|EGC12863.1| extracellular solute-binding protein 3 [Escherichia coli E1167] gi|332089654|gb|EGI94756.1| cystine-binding periplasmic protein [Shigella boydii 5216-82] gi|332096708|gb|EGJ01699.1| cystine-binding periplasmic protein [Shigella boydii 3594-74] Length = 266 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 85/241 (35%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 14 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 74 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + + L G + V GT E ++ + + ++ Sbjct: 129 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242 Query: 245 H 245 Sbjct: 243 I 243 >gi|315617857|gb|EFU98455.1| cystine-binding periplasmic protein [Escherichia coli 3431] Length = 266 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 86/241 (35%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L++ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 14 VMAVALVVGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 74 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + + L G + V GT E ++ + + ++ Sbjct: 129 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242 Query: 245 H 245 Sbjct: 243 I 243 >gi|300311002|ref|YP_003775094.1| amino acid ABC transporter/signal transduction system periplasmic protein/domain-containing protein [Herbaspirillum seropedicae SmR1] gi|300073787|gb|ADJ63186.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Herbaspirillum seropedicae SmR1] Length = 279 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 83/255 (32%), Gaps = 12/255 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFD 60 K L + A L +I+ RG L C GFD Sbjct: 8 IKRMGKGSLLVACAALFPGLAQADRLAEIQARGTLVCATLANNEPLGFPDPQSRQVVGFD 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD C A++ + + + + R AL Q D++S +T RE + + F Sbjct: 68 VDMCAAVARRLGVQMEQ---KSVTVEGRLPALIEGQADLVSAALGYT--RERARQIDFTA 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I+ G++ +S L+ I +T E + F Sbjct: 123 SHYQNPIKLIVQSDSGLNLISDLADKRISANRSSTPEQAVRRVLPKAM----LQTFADTP 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A R D + + ++ N+ + +S P A + +G+ + Sbjct: 179 QAFLALAQGRADGLAISMPS--GIRFVNESAGRFKFVEGALSWEPTALGVKKGERRLRDA 236 Query: 241 VSWTHYAMVTAEELG 255 V+ A+ E+ Sbjct: 237 VNAALAALEKDGEID 251 >gi|168069941|ref|XP_001786633.1| predicted protein [Physcomitrella patens subsp. patens] gi|162660828|gb|EDQ48553.1| predicted protein [Physcomitrella patens subsp. patens] Length = 542 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 65/209 (31%), Gaps = 11/209 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 L IK+ G ++ G F GF+VD A++ + P ++ Sbjct: 18 AQVRTLDQIKRSGEIRIGTEGAFPPFNYFDEKNQLTGFEVDLGNAIAQKLGLKP---VWI 74 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + L + D + + T R + F Y G + K + Sbjct: 75 TQAFDSLLIQLNQGRFDFVIASHGITEERAK--AVDFTNPHYCTGGVIVSKKGGP-KTAK 131 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G + VQ GTT +++ + + R DA+ D Sbjct: 132 DLQGKVVGVQIGTTYMEAAQKIPGIK----QVRTYQKDPDALQDLLSGRLDAWITDRFV- 186 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + + L +++ LA A+ Sbjct: 187 AKEAIKERKLENTLQLGELVGPERLAVAL 215 >gi|317486180|ref|ZP_07945019.1| bacterial extracellular solute-binding protein, family 3 [Bilophila wadsworthia 3_1_6] gi|316922571|gb|EFV43818.1| bacterial extracellular solute-binding protein, family 3 [Bilophila wadsworthia 3_1_6] Length = 250 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 82/247 (33%), Gaps = 23/247 (9%) Query: 1 MYK---DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + + ++L I L + + L GI+ FA V G Sbjct: 1 MKRIALRWLGALLLSITLAAPALAAG----------KHLINGIDANYPPFAYVDETGKPA 50 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD ++ + +++ P++ AL +K+ID++ + R+ Sbjct: 51 GFDVDSMNWIAKKMG---FTVEHKPMDWDGIIPALLAKKIDMVCSGMSISPERKA--QAN 105 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + + FI K ++ +G + VQ GT L Y + Sbjct: 106 FSDPYWTIRKIFITKKGSKVTEDQIYNGKIKLGVQRGTNEHEMLQKAQAEKKYNYQLRFY 165 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + R DA D A + +P + V + AI + D E Sbjct: 166 DSGPMAIEDLLNGRIDAIGLDA-APAEDAMRKGKPVQEVGV---FGSDEFGVAIRKDDAE 221 Query: 237 WYNIVSW 243 +V+ Sbjct: 222 TMKLVNE 228 >gi|26248187|ref|NP_754227.1| cystine transporter subunit [Escherichia coli CFT073] gi|91211139|ref|YP_541125.1| cystine transporter subunit [Escherichia coli UTI89] gi|117624062|ref|YP_852975.1| cystine transporter subunit [Escherichia coli APEC O1] gi|237705876|ref|ZP_04536357.1| cystine-binding periplasmic protein [Escherichia sp. 3_2_53FAA] gi|253773127|ref|YP_003035958.1| cystine transporter subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|331647513|ref|ZP_08348605.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli M605] gi|26108591|gb|AAN80794.1|AE016762_47 Cystine-binding periplasmic protein precursor [Escherichia coli CFT073] gi|91072713|gb|ABE07594.1| cystine-binding periplasmic protein precursor [Escherichia coli UTI89] gi|115513186|gb|ABJ01261.1| cystine-binding periplasmic protein precursor [Escherichia coli APEC O1] gi|226900633|gb|EEH86892.1| cystine-binding periplasmic protein [Escherichia sp. 3_2_53FAA] gi|253324171|gb|ACT28773.1| extracellular solute-binding protein family 3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|260448963|gb|ACX39385.1| extracellular solute-binding protein family 3 [Escherichia coli DH1] gi|331043237|gb|EGI15375.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli M605] Length = 285 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 84/241 (34%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 33 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 92 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 93 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 147 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + L G + V GT E ++ + + ++ Sbjct: 148 IQALVKKGNEGTIKTADDLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 203 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 204 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 261 Query: 245 H 245 Sbjct: 262 I 262 >gi|227891534|ref|ZP_04009339.1| glutamine-binding protein [Lactobacillus salivarius ATCC 11741] gi|227866681|gb|EEJ74102.1| glutamine-binding protein [Lactobacillus salivarius ATCC 11741] Length = 276 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 94/254 (37%), Gaps = 18/254 (7%) Query: 1 MY---KDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVK-AN 53 M K + L+I F + A+I ++ + G+ F + Sbjct: 1 MKNLRKVTLLFSALLMIFFLGACGKKDKAANIAQRTEQTKTVTWGVKADTRLFGLMNIKT 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G +GFDVD + L+ ++ +K++ + AK + L+++ ID + T R Sbjct: 61 GQIEGFDVDMAKTLTKKMYGKDAKVKLVQTTAKTKIPLLKNQNIDAVIAAMTITPERRKI 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKY 171 + F + GQ ++ + + +V L+ G + GTT + + Sbjct: 121 --VEFSQPYFAAGQSLLVPENSTVKNVHDLNKKGMVVLAVKGTTAVANIHKFAPKAK--- 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + F+ + A ++ + A + D L + + P + ++ + P A+ Sbjct: 176 -VLEFDDYGQAFTALKSGQGQAMSTDNGILAGIAS--ENPG-YQVVGGNFTNEPYGIAVD 231 Query: 232 QGDTEWYNIVSWTH 245 +G T+ + Sbjct: 232 KGQTQMMKRIDKAL 245 >gi|221231046|ref|YP_002510198.1| putative extracellular amino acid-binding protein [Streptococcus pneumoniae ATCC 700669] gi|220673506|emb|CAR67982.1| putative extracellular amino acid-binding protein [Streptococcus pneumoniae ATCC 700669] Length = 268 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 84/261 (32%), Gaps = 15/261 (5%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K L ++ F + ++ + IK +G L +N F V Sbjct: 4 MKKVLMTMFGLVMLPQLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R Sbjct: 64 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 119 DFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + + + A A+ + Sbjct: 175 SLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDS 234 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 E V T + + EL Sbjct: 235 KELKEAVDKTIQKLKESGELD 255 >gi|220923582|ref|YP_002498884.1| family 3 extracellular solute-binding protein [Methylobacterium nodulans ORS 2060] gi|219948189|gb|ACL58581.1| extracellular solute-binding protein family 3 [Methylobacterium nodulans ORS 2060] Length = 275 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 81/251 (32%), Gaps = 12/251 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 L + A+ +IK RG + G+ T F A+ G+DVD Sbjct: 15 MLAGGLAAACGPIGPRAAAAATPDEIKARGRIVIGVLTDYPPFGGTDADQKPAGYDVDVA 74 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 R + ++ + ++ +P+ R L + ++D+L T R S + F Sbjct: 75 RLFAKSLGVE---LELVPVTGPNRIPYLLTNKVDMLIATFGITAER--SKQVLFSNPYSA 129 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + K ++ L G +I V +T + ++ + F+ Sbjct: 130 LSTYVLGPKSLAVAKPEDLKGVTIGVARASTQDTAVSAVAP---PGTRIMRFDDDATTTQ 186 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYNIVSW 243 A + + + + L L + I P K A + DT + + Sbjct: 187 ALISGQVQSIGASNTVLAQL---TKDYASLGIEPKFNLKEQANGMAFRKADTALRDRANA 243 Query: 244 THYAMVTAEEL 254 + EL Sbjct: 244 FIAEIAGNGEL 254 >gi|148984844|ref|ZP_01818097.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP3-BS71] gi|168487566|ref|ZP_02712074.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae CDC1087-00] gi|147922866|gb|EDK73982.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP3-BS71] gi|183569635|gb|EDT90163.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae CDC1087-00] gi|301800337|emb|CBW32966.1| putative amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus pneumoniae OXC141] Length = 278 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K V + + LF + T+ + + G ++ V + +G Sbjct: 1 MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D A+ + + P++ + L ID++ T R Sbjct: 61 YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172 +AF + Q + K GI++ ++G ++ QAG++ + Sbjct: 116 VAFSNSYMKNEQVLVTKKLSGITTAKDMTGKTLGAQAGSSGYADFEANPELLKNIVANKE 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++ E + R D D +++ + + A + Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARK 235 Query: 233 GDTEWYNIVSWT 244 DT ++ Sbjct: 236 EDTNLVKKINEA 247 >gi|149008123|ref|ZP_01831654.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP18-BS74] gi|307126933|ref|YP_003878964.1| glutamine ABC transporter substrate-binding protein [Streptococcus pneumoniae 670-6B] gi|147760429|gb|EDK67407.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP18-BS74] gi|306483995|gb|ADM90864.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae 670-6B] Length = 282 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K V + + LF + T+ + + G ++ V + +G Sbjct: 5 MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS 64 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D A+ + + P++ + L ID++ T R Sbjct: 65 YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 119 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172 +AF + Q + K GI++ ++G ++ QAG++ + Sbjct: 120 VAFSNSYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEANPEILKNIVANKE 179 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++ E + R D D +++ + + A + Sbjct: 180 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARK 239 Query: 233 GDTEWYNIVSWT 244 DT ++ Sbjct: 240 EDTNLVKKINEA 251 >gi|291616413|ref|YP_003519155.1| FliY [Pantoea ananatis LMG 20103] gi|291151443|gb|ADD76027.1| FliY [Pantoea ananatis LMG 20103] Length = 280 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 104/269 (38%), Gaps = 25/269 (9%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + + A L DI+KRG L+ + F V + +G+D+D + L+ + K+ Sbjct: 37 AGNVLADQLQDIQKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMAKYLAKQM---KLKL 93 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Q +P+ + R LQ+ ++D++ + RE + F G K + Sbjct: 94 QLVPVTSANRVPYLQTDKVDLVISSMGKNPEREKV--IDFSRAYAPFFLGVFGPKGDHLK 151 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + LSG S+ V G ++ L++ +E +AY + + Sbjct: 152 DAAALSGKSVGVTRGAVEDMVLSEVAPK---DAQVKRYEDNNTTLSAYLSGQVQYVATGN 208 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + A+ T P++ + ++ SP + + + + V+ E GI Sbjct: 209 LVVAAI--TRQNPAKAPVAQFMLKDSPCYIGLKKDEPALKDKVNTLI-------EQGIKD 259 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGE 287 +N++S++ +L +N+G Sbjct: 260 GTLNKMSEE--------WLKAPLPANLGA 280 >gi|262165971|ref|ZP_06033708.1| amino acid ABC transporter amino acid-binding protein [Vibrio mimicus VM223] gi|262171174|ref|ZP_06038852.1| amino acid ABC transporter amino acid-binding protein [Vibrio mimicus MB-451] gi|261892250|gb|EEY38236.1| amino acid ABC transporter amino acid-binding protein [Vibrio mimicus MB-451] gi|262025687|gb|EEY44355.1| amino acid ABC transporter amino acid-binding protein [Vibrio mimicus VM223] Length = 258 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 88/254 (34%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + + K+ ++ GI F+ +A+G KGFD Sbjct: 1 MKKWLVATALIATTISGVTQA---------KEWKTVRFGIEGAYPPFSWTEADGSLKGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + + +P + +L +++ D + T R+ + F Sbjct: 52 VDMANALCTEMKVE---CKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 106 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +I K + + L G I VQ TT + ++D + + + Sbjct: 107 KYALIPNKYIAKKGANLAFTKEGLKGVKIGVQRATTHDKYISDNY---GDSVDIVRYGSF 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E R A GD SAL L + + ++ A+ + D Sbjct: 164 DEAYLDLANGRIAAVLGDASALEEGVLNKAGGDAYEFVGPSLTDPKWFGEGFGIAVRKQD 223 Query: 235 TEWYNIVSWTHYAM 248 + ++ ++ Sbjct: 224 KDLTEKLNAAITSL 237 >gi|300722507|ref|YP_003711797.1| arginine ABC transporter periplasmic-binding protein [Xenorhabdus nematophila ATCC 19061] gi|297629014|emb|CBJ89599.1| arginine transport protein (ABC superfamily, peri_bind) [Xenorhabdus nematophila ATCC 19061] Length = 245 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 91/247 (36%), Gaps = 23/247 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++L ++ L T+ ++ L+ F + N +GFD Sbjct: 1 MKKLLFTALLSVMALSATAA-----------EKTTLRFATEATYPPFEFIDTNNKIQGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ I S+ + +L+ ++ D L D T R+ + F Sbjct: 50 IDLTNAICEKI---NSECTFTNQAFDSLIPSLKFRRFDALMAGIDITPERQK--QVDFTH 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K S+++ L I +Q GTT + L + K + ++ + Sbjct: 105 TYYDNSAIFIAIKG-KFSNIADLKNKQIGIQNGTTHQKYLMEQHKE----IKTVPYDSYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + ++ N + + + L A+ +G+TE Sbjct: 160 NAILDLKNGRIDAVFGDTAVVHEWLRKNKELVTIGNKVTDKNYFGTGLGIAVRKGNTELL 219 Query: 239 NIVSWTH 245 N ++ Sbjct: 220 NKLNKAL 226 >gi|51595216|ref|YP_069407.1| amino acid ABC transporter, periplasmic protein [Yersinia pseudotuberculosis IP 32953] gi|153950109|ref|YP_001402150.1| amino acid ABC transporter periplasmic protein [Yersinia pseudotuberculosis IP 31758] gi|170025546|ref|YP_001722051.1| extracellular solute-binding protein [Yersinia pseudotuberculosis YPIII] gi|186894233|ref|YP_001871345.1| extracellular solute-binding protein [Yersinia pseudotuberculosis PB1/+] gi|51588498|emb|CAH20106.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pseudotuberculosis IP 32953] gi|152961604|gb|ABS49065.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pseudotuberculosis IP 31758] gi|169752080|gb|ACA69598.1| extracellular solute-binding protein family 3 [Yersinia pseudotuberculosis YPIII] gi|186697259|gb|ACC87888.1| extracellular solute-binding protein family 3 [Yersinia pseudotuberculosis PB1/+] Length = 262 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 91/244 (37%), Gaps = 12/244 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L+++ + + A L I++RG L+ + F V + +G+D+ Sbjct: 4 KKRMLWLWAVLVLV--QAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L+ + K+Q +P+ + R LQ+ ++D++ + RE +AF Sbjct: 62 DMAQYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREK--AIAFSRA 116 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G K + QL+G +I V G ++ L++ +E Sbjct: 117 YAPFFLGVFGAKDDELKQPEQLAGKTIGVTRGAVEDMVLSEIAPKA---AQIRRYEDNNT 173 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +AY + + + + AL P + + ++ SP + QG+ V Sbjct: 174 TLSAYLSGQVNYLATGNLVISALARQ--NPKQAPVAKFMLKDSPCYIGLRQGEPALKAKV 231 Query: 242 SWTH 245 Sbjct: 232 DALI 235 >gi|301169821|emb|CBW29425.1| cystine transporter subunit [Haemophilus influenzae 10810] Length = 257 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 83/249 (33%), Gaps = 13/249 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L + F++FS I ++K L G F +G GFD Sbjct: 1 MKKLLFTTALLTGAIAFSTFSHAGEIADRVEKTKTLLVGTEGTYAPFTFHDKSGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R ++ + K+++ + L +K+ D+++ T E +F Sbjct: 61 VEVIRKVAEKLG---LKVEFKETQWDAMYAGLNAKRFDVIANQT--NPSPERLKKYSFTT 115 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + I S L G + KA +V + + Sbjct: 116 PYNYSGGVIVTKSSDNSIKSFEDLKGRKSA----QSATSNWGKDAKAAG--AQILVVDGL 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R +A D A+ + I D K+P A A +QG+ Sbjct: 170 AQSLELIKQGRAEATINDKLAVLDYFKQHPNSG-LKIAYDRGDKTPTAFAFLQGEDTLIT 228 Query: 240 IVSWTHYAM 248 + A+ Sbjct: 229 KFNQVLEAL 237 >gi|197250151|ref|YP_002146069.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197213854|gb|ACH51251.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 266 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 85/247 (34%), Gaps = 14/247 (5%) Query: 2 YKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ ++ S + +L +K+RG L G+ F+ +G GF+ Sbjct: 8 RRALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF AL+ + P +L +K+ID++ + +R+ F Sbjct: 68 VDFAEALAKHLGVKA---SLKPTKWDGILASLDAKRIDVVINQVTISDVRKK--KYDFST 122 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G ++ K I + + L G + V GT E L + ++ Sbjct: 123 PYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGVDIRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R R DA D L AL L + D S+ A+ +G+ + Sbjct: 179 DPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLL 236 Query: 239 NIVSWTH 245 V Sbjct: 237 KAVDNAI 243 >gi|149021767|ref|ZP_01835774.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP23-BS72] gi|168483890|ref|ZP_02708842.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae CDC1873-00] gi|168493400|ref|ZP_02717543.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae CDC3059-06] gi|168575956|ref|ZP_02721871.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae MLV-016] gi|169833700|ref|YP_001694907.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae Hungary19A-6] gi|194397294|ref|YP_002038130.1| ABC transporter substrate-binding protein [Streptococcus pneumoniae G54] gi|225854943|ref|YP_002736455.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae JJA] gi|147930003|gb|EDK80990.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP23-BS72] gi|168996202|gb|ACA36814.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae Hungary19A-6] gi|172042794|gb|EDT50840.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae CDC1873-00] gi|183576536|gb|EDT97064.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae CDC3059-06] gi|183578212|gb|EDT98740.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae MLV-016] gi|194356961|gb|ACF55409.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae G54] gi|225723790|gb|ACO19643.1| ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae JJA] Length = 278 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K V + + LF + T+ + + G ++ V + +G Sbjct: 1 MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D A+ + + P++ + L ID++ T R Sbjct: 61 YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172 +AF + Q + K GI++ ++G ++ QAG++ + Sbjct: 116 VAFSNSYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEANPEILKNIVANKE 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++ E + R D D +++ + + A + Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARK 235 Query: 233 GDTEWYNIVSWT 244 DT ++ Sbjct: 236 EDTTLVKKINEA 247 >gi|229163090|ref|ZP_04291046.1| Arginine-binding extracellular protein artP [Bacillus cereus R309803] gi|228620496|gb|EEK77366.1| Arginine-binding extracellular protein artP [Bacillus cereus R309803] Length = 259 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 89/254 (35%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N K L G + + V+A+ + G Sbjct: 1 MKKFLSISFALILIVSMFSACSNGEEKATEKNEKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIQSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFKVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|16273008|ref|NP_439237.1| amino acid ABC transporter periplasmic-binding protein [Haemophilus influenzae Rd KW20] gi|145636468|ref|ZP_01792136.1| amino acid ABC transporter periplasmic-binding protein [Haemophilus influenzae PittHH] gi|260580165|ref|ZP_05847995.1| amino acid ABC transporter periplasmic-binding protein [Haemophilus influenzae RdAW] gi|1723181|sp|P45024|Y1080_HAEIN RecName: Full=Probable amino-acid ABC transporter-binding protein HI_1080; Flags: Precursor gi|1574634|gb|AAC22736.1| amino acid ABC transporter, periplasmic-binding protein [Haemophilus influenzae Rd KW20] gi|145270293|gb|EDK10228.1| amino acid ABC transporter periplasmic-binding protein [Haemophilus influenzae PittHH] gi|260093449|gb|EEW77382.1| amino acid ABC transporter periplasmic-binding protein [Haemophilus influenzae RdAW] Length = 257 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 83/249 (33%), Gaps = 13/249 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L + F++FS I ++K L G F +G GFD Sbjct: 1 MKKLLFTTALLTGAIAFSTFSHAGEIADRVEKTKTLLVGTEGTYAPFTFHDKSGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R ++ + K+++ + L +K+ D+++ T E +F Sbjct: 61 VEVIRKVAEKLG---LKVEFKETQWDAMYAGLNAKRFDVIANQT--NPSPERLKKYSFTT 115 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + I S L G + KA +V + + Sbjct: 116 PYNYSGGVIVTKSSDNSIKSFEDLKGRKSA----QSATSNWGKDAKAAG--AQILVVDGL 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R +A D A+ + I D K+P A A +QG+ Sbjct: 170 AQSLELIKQGRAEATINDKLAVLDYFKQHPNSG-LKIAYDRGDKTPTAFAFLQGEDALIT 228 Query: 240 IVSWTHYAM 248 + A+ Sbjct: 229 KFNQVLEAL 237 >gi|319761716|ref|YP_004125653.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|317116277|gb|ADU98765.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] Length = 277 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 107/267 (40%), Gaps = 14/267 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSK 77 S S A L DIK +G L CG+ F+ + +G+DVDFC A++ ++ Sbjct: 24 STSAMADQLADIKAKGSLVCGVLGTSKPFSFPNPQTREIQGYDVDFCSAVAKSLGVK--- 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ P++ R L K+ID+++ N WT R + +A+ Y Q + + Sbjct: 81 LEIKPISVAARIPELTQKRIDVIAANLGWTAER--AQQIAYSDAYYVALQKVAVKRGAFA 138 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S + L+G + G+T+E+ + + P+ F+ A + + D + Sbjct: 139 RS-TDLAGKRVSATKGSTSEIAIRAFLPTA----TPVTFQDPPPAFLALQQGKVDGFVVT 193 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 L LK ++ IL +++ + + +T V+ T M + E Sbjct: 194 EMVLVQLKAQSEADHPIDILEPPLAEEFWGIGMRKEETALSGHVNKTLRQMEASGE---A 250 Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSN 284 + ++ T+ ++R + Sbjct: 251 ARIFDKWMGAGTDFKMKRGFVVKPVQG 277 >gi|294083879|ref|YP_003550636.1| putative ABC transporter periplasmic amino acid-binding protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292663451|gb|ADE38552.1| putative ABC transporter periplasmic amino acid-binding protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 275 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 5/198 (2%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + L L + T A L D+ G ++CG+ AN + GFDV+ Sbjct: 9 KMAVCASLALSLALTTGTVAQADKLDDVIDNGKVRCGVVLDFPPIGYRDANNEPAGFDVE 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +C+ L++A+ D I L ER ++ S + D++ T TL R ++G F Sbjct: 69 YCKDLATAMDVDYEIIP---LTWAERLPSIVSNRADVVFGGTSDTLERAKTVG--FTIPY 123 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 ++ K+ GI+S + + G + GT E+ K + F+ E+ Sbjct: 124 AIYYAQAVVTKESGITSFADMKGKRVGAAVGTVPEIEFLKIAKEWGTENLYQGFQSENEV 183 Query: 183 DAAYRAHRCDAYTGDISA 200 A + DA +A Sbjct: 184 FLAVAQGKIDAGITTNTA 201 >gi|148988545|ref|ZP_01819978.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP6-BS73] gi|147925746|gb|EDK76821.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP6-BS73] gi|301794513|emb|CBW36955.1| putative amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus pneumoniae INV104] Length = 278 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K V + + LF + T+ + + G ++ V + +G Sbjct: 1 MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D A+ + + P++ + L ID++ T R Sbjct: 61 YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172 +AF + Q + K GI++ ++G ++ QAG++ + Sbjct: 116 VAFSNSYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEANPELLKNIVANKE 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++ E + R D D +++ + + A + Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARK 235 Query: 233 GDTEWYNIVSWT 244 DT ++ Sbjct: 236 EDTTLVKKINEA 247 >gi|68249637|ref|YP_248749.1| amino-acid ABC transporter binding protein [Haemophilus influenzae 86-028NP] gi|145630171|ref|ZP_01785953.1| CTP synthetase [Haemophilus influenzae R3021] gi|145638106|ref|ZP_01793716.1| probable amino-acid ABC transporter binding protein [Haemophilus influenzae PittII] gi|148826306|ref|YP_001291059.1| amino-acid ABC transporter binding protein [Haemophilus influenzae PittEE] gi|148828242|ref|YP_001292995.1| CTP synthetase [Haemophilus influenzae PittGG] gi|319776667|ref|YP_004139155.1| Bacterial extracellular solute-binding protein [Haemophilus influenzae F3047] gi|68057836|gb|AAX88089.1| probable amino-acid ABC transporter binding protein [Haemophilus influenzae 86-028NP] gi|144984452|gb|EDJ91875.1| CTP synthetase [Haemophilus influenzae R3021] gi|145272435|gb|EDK12342.1| probable amino-acid ABC transporter binding protein [Haemophilus influenzae PittII] gi|148716466|gb|ABQ98676.1| probable amino-acid ABC transporter binding protein [Haemophilus influenzae PittEE] gi|148719484|gb|ABR00612.1| CTP synthetase [Haemophilus influenzae PittGG] gi|309751272|gb|ADO81256.1| L-cystine ABC transporter, periplasmic-binding protein TcyA [Haemophilus influenzae R2866] gi|309973449|gb|ADO96650.1| L-cystine ABC transporter, periplasmic-binding protein TcyA [Haemophilus influenzae R2846] gi|317451258|emb|CBY87492.1| Bacterial extracellular solute-binding protein [Haemophilus influenzae F3047] Length = 257 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 83/249 (33%), Gaps = 13/249 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L + F++FS I ++K L G F +G GFD Sbjct: 1 MKKLLFTTALLTGAIAFSTFSHAGEIADRVEKTKTLLVGTEGTYAPFTFHDKSGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R ++ + K+++ + L +K+ D+++ T E +F Sbjct: 61 VEVIRKVAEKLG---LKVEFKETQWDAMYAGLNAKRFDVIANQT--NPSPERLKKYSFTT 115 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + I S L G + KA +V + + Sbjct: 116 PYNYSGGVIVTKSSDNSIKSFEDLKGRKSA----QSATSNWGKDAKAAG--AQILVVDGL 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R +A D A+ + I D K+P A A +QG+ Sbjct: 170 AQSLELIKQGRAEATINDKLAVLDYFKKHPNSG-LKIAYDRGDKTPTAFAFLQGEDALIT 228 Query: 240 IVSWTHYAM 248 + A+ Sbjct: 229 KFNQVLEAL 237 >gi|254387277|ref|ZP_05002537.1| glutamate binding periplasmic protein [Streptomyces sp. Mg1] gi|194346082|gb|EDX27048.1| glutamate binding periplasmic protein [Streptomyces sp. Mg1] Length = 276 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 92/251 (36%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ I + T+ I GI G + +G + GFD Sbjct: 9 MKVSKAGAVAATIAVALTASGCAEDAKEPIA------IGIKFDQPGIGFREQDGTFTGFD 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + ++I++ + + +R L +Q ++D ++ + + R+ + F Sbjct: 63 VDVATYVAKQLGYKANEIEFKQVFSSDRELLIQYNEVDFVAASYSISDKRKE--KVDFAG 120 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ ++ L+ +C G+T+ A+ KA K + E Sbjct: 121 PYFIAHQDLLVRADDASVTKAEDLNSKKLCSVTGSTS----AEKVKALAPKASVMELEGY 176 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A + DA T D S L + + ++ +S + +G+ E Sbjct: 177 SECLVAVQDGSADAMTTDNSILAGYAARKENAGKFKLIGLSLSNENYGIGVKKGNKELQK 236 Query: 240 IVSWTHYAMVT 250 ++ MVT Sbjct: 237 KINAALTKMVT 247 >gi|304398231|ref|ZP_07380105.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. aB] gi|304354097|gb|EFM18470.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. aB] Length = 260 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 78/250 (31%), Gaps = 21/250 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L + S G ++ G + F A G GFD Sbjct: 1 MKKRVLALSLMLGLSSAASVFAAVP--------GSIRIGTDPTYPPFESKDAQGKLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + I ++ Y+ + +L++K+ID + + T R+ + F Sbjct: 53 IDLANEICKRI---HTQCTYVESDFDALIPSLKAKKIDAIISSLSITAKRQEEIA--FSD 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K I ++ L G +I + GTT E ++ + P + Sbjct: 108 KLYAANARLVAPKGSKIQPTIESLKGKNIGLLQGTTQETYANQNWRPKGVNVTP--YANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + A R DA D L + + + + + D Sbjct: 166 DLVYQDLNAGRIDAAFQDEVQASEGFLKQPVGKNYAFAGPAVKDDKIFGVGTGMGLRKDD 225 Query: 235 TEWYNIVSWT 244 +E + Sbjct: 226 SELKAAIDKA 235 >gi|256787709|ref|ZP_05526140.1| sugar-binding protein [Streptomyces lividans TK24] Length = 334 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 87/273 (31%), Gaps = 18/273 (6%) Query: 16 FFTSFSTNASILGDIKKR----GFLKCGINTGLVGFAEVKANG----DWKGFDVDFCRAL 67 + + I+ R L G++ + N + +GFD+D + Sbjct: 58 TLAPSGDDGPTIDRIRAREGEKRKLIVGVDQNSFRWGYRDPNSGGDAELEGFDIDLAHRI 117 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + D +Q+ + +R A+Q ++D++ R + +AF + GQ Sbjct: 118 AKDVLGDEDAVQFKAIPTDQRVPAIQDGRVDMVVRTMTINC--DRLEDVAFSAPYFRTGQ 175 Query: 128 GFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHP---IVFERVEEID 183 + K I+ L+G IC AG+T TL K + + Sbjct: 176 QVLAPKSSKITGYDGTLAGKEICTAAGSTALSTLEQDQKDGRLAEGVDLRTTVPNQLDCL 235 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + DA D + + + + D + A+ + + V+ Sbjct: 236 VRLQLGEVDAVVTDGALAASQAAQDP---TVELKGDAFTTEYYGVAMKKDADDLVRRVNR 292 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 A+ Q + + +T + + Sbjct: 293 VLEQW-RADRADGWQHSYEEWLSETMDDPAKSL 324 >gi|309789346|ref|ZP_07683936.1| cystine-binding periplasmic protein [Shigella dysenteriae 1617] gi|308922740|gb|EFP68257.1| cystine-binding periplasmic protein [Shigella dysenteriae 1617] gi|332095482|gb|EGJ00498.1| cystine-binding periplasmic protein [Shigella dysenteriae 155-74] Length = 252 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 84/240 (35%), Gaps = 13/240 (5%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 + L+ + +L +K+RG L G+ F+ +G GF+V+F + L Sbjct: 1 MAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQL 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + + P +L SK+ID++ + R+ F G Sbjct: 61 AKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISGI 115 Query: 128 GFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I + + L G + V GT E ++ + + ++ Sbjct: 116 QALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQD 171 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 172 LRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDAI 229 >gi|229120016|ref|ZP_04249271.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus 95/8201] gi|228663482|gb|EEL19067.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus 95/8201] Length = 264 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESATTSSNGKKEFRYAMSGLYKPFNYKENDGKLVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + P+ I + L++K+ D++ + T R + F Sbjct: 61 FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KHTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|56414070|ref|YP_151145.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362993|ref|YP_002142630.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56128327|gb|AAV77833.1| glutamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094470|emb|CAR59987.1| glutamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 248 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 81/245 (33%), Gaps = 20/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSLLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K ID+ T R+ + F Sbjct: 53 LWDAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ I SV L G + V++GT + DY KA+ F + Sbjct: 108 YKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNINN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + + + A +G E V Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGESLEAQQYGVAFPKGSDELREKV 222 Query: 242 SWTHY 246 + Sbjct: 223 NGALK 227 >gi|325523433|gb|EGD01757.1| polar amino acid transporter substrate-binding protein [Burkholderia sp. TJI49] Length = 266 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 77/235 (32%), Gaps = 14/235 (5%) Query: 17 FTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLGVKT 78 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 Q++P LQ+ + D++ T R+ L F + I K Sbjct: 79 ---QFVPTEWSGIIAGLQAGKFDVIVNQVTITPQRKE--ALDFSQPYTYSAAQLIQRKDD 133 Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 S+ G + V GT D + E A R +A Sbjct: 134 TRDFKSLEDFKGKKLGVTLGTNY-----DQMARAVPGIEVQTYPGAPEKLRDLAAGRIEA 188 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 D + + K +A +G+ ++ ++ ++ Sbjct: 189 TLDDR-LMLPYMIKTSNLPLRPGAVLNGGKQEMAIPFRKGNPKFEKAINDALTSL 242 >gi|189404437|ref|ZP_02789465.2| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4501] gi|189365555|gb|EDU83971.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4501] Length = 285 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 84/241 (34%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + LI + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 33 VMAVALIAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 92 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 93 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 147 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + L G + V GT E ++ + + ++ Sbjct: 148 IQALVKKGNEGTIKTADDLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 203 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 204 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 261 Query: 245 H 245 Sbjct: 262 I 262 >gi|16801415|ref|NP_471683.1| hypothetical protein lin2352 [Listeria innocua Clip11262] gi|16414875|emb|CAC97579.1| lin2352 [Listeria innocua Clip11262] Length = 486 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 101/279 (36%), Gaps = 24/279 (8%) Query: 1 MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I F+ + T L I+++G L G++ + Sbjct: 1 MQKHVLQKFAAILLIFIFVFSGFTTVFAADTQDETLTKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F F Q ++ K +SV+ +G + Q TT E + Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKEKFTSVNDFNGIKVGAQKQTTQEELAKNEL-- 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 174 --VGSDVVSLQKVPDLILNLKSNKLDAVVLEGPVAEAYISQDKTLALADIKFVNGSKE-T 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 A A+ +G T V+ + + L Q N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQNEANKLM 269 >gi|228992898|ref|ZP_04152823.1| Arginine-binding extracellular protein artP [Bacillus pseudomycoides DSM 12442] gi|228998943|ref|ZP_04158526.1| Arginine-binding extracellular protein artP [Bacillus mycoides Rock3-17] gi|229006474|ref|ZP_04164127.1| Arginine-binding extracellular protein artP [Bacillus mycoides Rock1-4] gi|228754787|gb|EEM04179.1| Arginine-binding extracellular protein artP [Bacillus mycoides Rock1-4] gi|228760818|gb|EEM09781.1| Arginine-binding extracellular protein artP [Bacillus mycoides Rock3-17] gi|228766947|gb|EEM15585.1| Arginine-binding extracellular protein artP [Bacillus pseudomycoides DSM 12442] Length = 261 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 89/256 (34%), Gaps = 12/256 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG--DIKKRGFLKCGINTGLVGFAEVKAN--GDW 56 M K +S ++I+ S + K + L G + + V+A+ + Sbjct: 1 MKKLLSISFALILIISMFSACSKGETKESNTKKDKKVLVMGTSADYKPYEYVEASKSDEI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD + + + + ++ ++ +L S ++D + T R+ Sbjct: 61 IGFDVDIAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTPERKG--NA 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F I + + K GI S+ L G + VQ G+ E ++ K N + Sbjct: 116 DFTDIYFVAKNMIVSKKDSGIKSLQDLEGKKVGVQTGSIQEEKANEFNKQVNFQAEGR-- 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 +R+ EI +A R DA + + + + + + + A A+ + + Sbjct: 174 DRIPEIVQEIQAGRFDAAILEDTVAKNYLEKIK-GLQGIEIQEAPEEVGAAIALPKNSDK 232 Query: 237 WYNIVSWTHYAMVTAE 252 E Sbjct: 233 TAEFNKVIKKMQENGE 248 >gi|325062401|gb|ADY66091.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Agrobacterium sp. H13-3] Length = 277 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 81/220 (36%), Gaps = 9/220 (4%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 D+K R L G+ + + G+ GF+V+ + ++ + KI+++P+ A Sbjct: 31 DDVKARDKLIVGVKNDYPPYGYLNDKGEIIGFEVELAKYVAKELLGSSDKIEFVPVVAAN 90 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGA 146 R L + +ID + T R+ + F +M K+ S +L G Sbjct: 91 RIEFLTAGRIDAIFATLGVTPERDKV--IDFTTAYVSSPGPAVMMAKEATTSKWEELKGK 148 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 +C G+ + + F + F+ E A R +RC + D L LK+ Sbjct: 149 PVCGIQGSYYNKKMTEEF-----GIQLVAFKTQPEAMRALRDNRCVGFVFDQMTL-DLKV 202 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + P+A I +GD + V Sbjct: 203 QEADWKGYKVAVPTYEYLPMAGGIREGDKAFQEAVDKAIT 242 >gi|253991466|ref|YP_003042822.1| amino acid ABC transporter [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782916|emb|CAQ86081.1| similar to amino acid abc transporter [Photorhabdus asymbiotica] Length = 257 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 76/246 (30%), Gaps = 14/246 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K FF ++L +I F S +A S L IK G K F A+G GFDV Sbjct: 2 KVFFTALLAGVIQFGIVHSASAESSLDKIKSTGVFKIATEGTYPPFTYHDASGTLTGFDV 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + R ++ + + L +K+ D + T R+ F Sbjct: 62 EIGREIAHRLNVKAE---FTEGKWDGLIAGLDAKRYDAVINQVAITPERKK--KYDFSAP 116 Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I + I + S L G + + T+ LA F A + E Sbjct: 117 YIISKAVLITRQNNDSIKTFSDLKGKTSS-HSLTSNYAQLAKRFGA-----EIVPTEGFN 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + R DA D + K V+ + + I +G+ E Sbjct: 171 QAIDLVATGRADATINDNLSYLDFKKHKPNAPVKVVASEPNGDQ-VGILIRKGEPELQAA 229 Query: 241 VSWTHY 246 + Sbjct: 230 IDKALT 235 >gi|153011032|ref|YP_001372246.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151562920|gb|ABS16417.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 253 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 84/248 (33%), Gaps = 18/248 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L + L + K+ ++ F + +G +GFD Sbjct: 1 MLKSVLLAGLASVFLALPVQA---------KEWKEIRIASEGAYPPFNYMSPDGKLEGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL A+ +K + + LQ+ + D + + T RE + F Sbjct: 52 LDIANALCKAM---EAKCTIVANDWDGMIPGLQANKFDAVIASMAITEEREKQVA--FTE 106 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y ++ K ++S S G ++ QAGTT D + ++ Sbjct: 107 RYYTTPLAVVVPKDTDMTSLDPSAFDGKTVGAQAGTTQGNYADDVYGKAGAD--VKLYPT 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E +A + R DA D + S++ +A A+ +GD + Sbjct: 165 ADEANADLESGRLDAIAADKFLAADWLKKQGANCCKFLGDIPGSETKIAVALRKGDDDLR 224 Query: 239 NIVSWTHY 246 + Sbjct: 225 EQFNAAIK 232 >gi|148997439|ref|ZP_01825044.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP11-BS70] gi|307068145|ref|YP_003877111.1| amino acid ABC transporter/signal transduction system periplasmic domain-containing protein [Streptococcus pneumoniae AP200] gi|147756494|gb|EDK63535.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP11-BS70] gi|306409682|gb|ADM85109.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Streptococcus pneumoniae AP200] Length = 278 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K V + + LF + T+ + + G ++ V + +G Sbjct: 1 MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D A+ + + P++ + L ID++ T R Sbjct: 61 YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172 +AF + Q + K GI++ ++G ++ QAG++ + Sbjct: 116 VAFSNSYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEANPELLKNIVANKE 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++ E + R D D +++ + + A + Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARK 235 Query: 233 GDTEWYNIVSWT 244 DT ++ Sbjct: 236 EDTTLVKKINEA 247 >gi|62180528|ref|YP_216945.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62128161|gb|AAX65864.1| putative periplasmic binding transport protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715004|gb|EFZ06575.1| cystine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 252 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 81/240 (33%), Gaps = 13/240 (5%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 + L+ + +L +K+RG L G+ F+ +G GF+VDF AL Sbjct: 1 MAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFEVDFAEAL 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + P +L SK+ID++ + +R+ F G Sbjct: 61 AKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDVRKK--KYDFSTPYTVSGV 115 Query: 128 GFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I + + L G + V GT E L + ++ Sbjct: 116 QALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGVDIRTYDDDPTKYQD 171 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R R DA D L AL L + D S+ A+ +G+ + V Sbjct: 172 LRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAVDNAI 229 >gi|313617589|gb|EFR89902.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria innocua FSL S4-378] Length = 486 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 101/279 (36%), Gaps = 24/279 (8%) Query: 1 MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I F+ + T L I+++G L G++ + Sbjct: 1 MQKHVLQKFAAILLIFIFVFSGFTTVFAADTQDETLTKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F F Q ++ K +SV+ +G + Q TT E + Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKEKFTSVNDFNGIKVGAQKQTTQEELAKNEL-- 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 174 --VGSDVVSLQKVPDLILNLKSNKLDAVVLEGPVAEAYISQDKTLALADIKFVNGSKE-T 230 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 A A+ +G T V+ + + L Q N++ Sbjct: 231 AIAMPKGSTALQEKVNASIKDIQDTGLLKKYQNEANKLM 269 >gi|264679052|ref|YP_003278959.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni CNB-2] gi|262209565|gb|ACY33663.1| amino-acid ABC transporter bindingprotein ybeJ precursor [Comamonas testosteroni CNB-2] Length = 303 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 90/232 (38%), Gaps = 6/232 (2%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC-RALS---SAIFDDPSKIQYL 81 L I+ G + G+ + NG + GF V+ C +AL+ + +I+Y Sbjct: 20 TLDRIRDTGVVTMGVREASGTMSYTLGNGKYAGFHVELCEKALARMQQQLKLPRLEIRYQ 79 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + A+ R + + +D+ T R+ + F P Y + + K GI+ V+ Sbjct: 80 MVTAQNRVPLVANGTVDVECGTTTNNAARQKEVA--FAPTVYMEEVRTAVRKSSGITEVA 137 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 QL G + G T L + K + ++ ++ + E R DA D L Sbjct: 138 QLKGRKVAATTGATAVTLLRRFSKEKGVDFNVLMAKDNAECFVLLETGRADACVADGQIL 197 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + P ++ I+ + S P+A + + E+ + M ++ E Sbjct: 198 ASGLSRLRDPGQYAIVGEPFSVEPIAIMLDRKSPEFKKLFDAQIREMASSGE 249 >gi|258626820|ref|ZP_05721627.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio mimicus VM603] gi|258580867|gb|EEW05809.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio mimicus VM603] Length = 260 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 88/254 (34%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + + K+ ++ GI F+ +A+G KGFD Sbjct: 3 MKKWLVATALIATTISGVTQA---------KEWKTVRFGIEGAYPPFSWTEADGSLKGFD 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + + +P + +L +++ D + T R+ + F Sbjct: 54 VDMANALCTEMKVE---CKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTG 108 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +I K + + L G I VQ TT + ++D + + + Sbjct: 109 KYALIPNKYIAKKGANLAFTKEGLKGVKIGVQRATTHDKYISDNY---GDSVDIVRYGSF 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E R A GD SAL L + + ++ A+ + D Sbjct: 166 DEAYLDLANGRIAAVLGDASALEEGVLNKAGGDAYEFVGPSLTDPKWFGEGFGIAVRKQD 225 Query: 235 TEWYNIVSWTHYAM 248 + ++ ++ Sbjct: 226 KDLTEKLNAAITSL 239 >gi|37525534|ref|NP_928878.1| arginine-binding periplasmic protein 1 precursor [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784962|emb|CAE13880.1| Arginine-binding periplasmic protein 1 precursor [Photorhabdus luminescens subsp. laumondii TTO1] Length = 244 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 93/247 (37%), Gaps = 23/247 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++L + L T+ +I ++ F + AN +GFD Sbjct: 1 MKKLLFAALLGTVALSATA------TEKEI-----IRFATEATYPPFEFIDANNKIQGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ I + + + +L+ ++ D L+ D T R+ + F Sbjct: 50 VDLANAICEKI---NATCTFTNQSFDSLIPSLKFRRFDALAAGIDITPERQK--QVDFTN 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K +SS ++L G + +Q GTT + L + K + ++ + Sbjct: 105 TYYDNSAVFISVKG-KVSSTAELKGKLVGIQNGTTHQKYLMEQRKE----IKTVPYDSYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N+ S + + L A+ +G+ + Sbjct: 160 NAILDLKNGRLDAVFGDTAVVNEWLKKNENLSTVGNKVTDKNYFGIGLGIAVRKGNKDLQ 219 Query: 239 NIVSWTH 245 + ++ Sbjct: 220 DKLNKAL 226 >gi|323180829|gb|EFZ66369.1| cystine-binding periplasmic protein [Escherichia coli 1180] Length = 255 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 3 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 62 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 63 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 117 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + + L G + V GT E ++ + + ++ Sbjct: 118 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 173 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ + +G+ + V+ Sbjct: 174 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVTLRKGNEDLLKAVNDA 231 Query: 245 H 245 Sbjct: 232 I 232 >gi|319758137|gb|ADV70079.1| putative amino acid transporter, amino acid-binding protein [Streptococcus suis JS14] Length = 270 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 92/264 (34%), Gaps = 18/264 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEV---KAN 53 M K + ++ L + ++ S NA+ L D++++G L +N F Sbjct: 2 MKKYIMMGLVLLATMTLSACSGNATQEDTSLKDVQEKGKLIVALNPEFPPFEFRTLVDGK 61 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G D++ +A+ + + +++ ++ +QS Q DI T R Sbjct: 62 DTIVGADIELAKAIGQELGVE---VEFSAMSFDNVLNNVQSGQSDIAISGISATEERAKV 118 Query: 114 LGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F Y I++K+ +S+ L+ A+I Q G+ E + + + Sbjct: 119 --YDFSIPYYTSTNKVIINKEDLAQYTSLDSLAEANIGAQKGSIQEQIIKEQLPS----S 172 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 I E+ ++ + +A + A ND A A+ Sbjct: 173 TVIALASNGELINQLKSQKVEAVIFEEPIAKAYVAKNDDLVILDTEIKSSYSDAYAIALP 232 Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255 +G T V +V + ++ Sbjct: 233 KGSTALKEKVDSVITKLVESGQMD 256 >gi|283784571|ref|YP_003364436.1| glutamine ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] gi|282948025|emb|CBG87589.1| glutamine ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] Length = 248 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 83/245 (33%), Gaps = 20/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFD+D Sbjct: 2 KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDID 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 53 LWAAVAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ I SV L G ++ V++GT + DY KA+ F ++ Sbjct: 108 YKSGLLVMVKANNNDIKSVKDLDGKTLAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + + + A +G + V Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGESLEAQQYGIAFPKGSDDLREKV 222 Query: 242 SWTHY 246 + Sbjct: 223 NGALK 227 >gi|253751788|ref|YP_003024929.1| putative extracellular amino acid-binding protein [Streptococcus suis SC84] gi|253753611|ref|YP_003026752.1| extracellular amino acid-binding protein [Streptococcus suis P1/7] gi|253755508|ref|YP_003028648.1| extracellular amino acid-binding protein [Streptococcus suis BM407] gi|251816077|emb|CAZ51697.1| putative extracellular amino acid-binding protein [Streptococcus suis SC84] gi|251817972|emb|CAZ55753.1| putative extracellular amino acid-binding protein [Streptococcus suis BM407] gi|251819857|emb|CAR45861.1| putative extracellular amino acid-binding protein [Streptococcus suis P1/7] Length = 269 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 92/264 (34%), Gaps = 18/264 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEV---KAN 53 M K + ++ L + ++ S NA+ L D++++G L +N F Sbjct: 1 MKKYIMMGLVLLATMTLSACSGNATQEDTSLKDVQEKGKLIVALNPEFPPFEFRTLVDGK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G D++ +A+ + + +++ ++ +QS Q DI T R Sbjct: 61 DTIVGADIELAKAIGQELGVE---VEFSAMSFDNVLNNVQSGQSDIAISGISATEERAKV 117 Query: 114 LGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F Y I++K+ +S+ L+ A+I Q G+ E + + + Sbjct: 118 --YDFSIPYYTSTNKVIINKEDLAQYTSLDSLAEANIGAQKGSIQEQIIKEQLPS----S 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 I E+ ++ + +A + A ND A A+ Sbjct: 172 TVIALASNGELINQLKSQKVEAVIFEEPIAKAYVAKNDDLVILDTEIKSSYSDAYAIALP 231 Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255 +G T V +V + ++ Sbjct: 232 KGSTALKEKVDSVITKLVESGQMD 255 >gi|170019742|ref|YP_001724696.1| cystine transporter subunit [Escherichia coli ATCC 8739] gi|209919342|ref|YP_002293426.1| cystine transporter subunit [Escherichia coli SE11] gi|307314173|ref|ZP_07593783.1| extracellular solute-binding protein family 3 [Escherichia coli W] gi|331642542|ref|ZP_08343677.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli H736] gi|331653328|ref|ZP_08354333.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli M718] gi|331677805|ref|ZP_08378480.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli H591] gi|169754670|gb|ACA77369.1| extracellular solute-binding protein family 3 [Escherichia coli ATCC 8739] gi|209912601|dbj|BAG77675.1| cystine-binding periplasmic protein precursor [Escherichia coli SE11] gi|306906142|gb|EFN36660.1| extracellular solute-binding protein family 3 [Escherichia coli W] gi|312946512|gb|ADR27339.1| cystine transporter subunit [Escherichia coli O83:H1 str. NRG 857C] gi|315061220|gb|ADT75547.1| cystine transporter subunit [Escherichia coli W] gi|331039340|gb|EGI11560.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli H736] gi|331049426|gb|EGI21498.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli M718] gi|331074265|gb|EGI45585.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli H591] Length = 285 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 85/241 (35%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 33 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 92 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 93 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 147 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + + L G + V GT E ++ + + ++ Sbjct: 148 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 203 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 204 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 261 Query: 245 H 245 Sbjct: 262 I 262 >gi|55821171|ref|YP_139613.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus thermophilus LMG 18311] gi|55737156|gb|AAV60798.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus thermophilus LMG 18311] Length = 277 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 60/285 (21%), Positives = 111/285 (38%), Gaps = 27/285 (9%) Query: 2 YKDFF-----VSILCLIILFFTSFSTNA---------SILGDIKKRGFLKCGINTGLVGF 47 +K VS++ + T+ T A + I RG L G+ + F Sbjct: 3 FKKILRYLTAVSLVIATVFLITNHKTEAEDTSKLLDSKAVQKIVNRGTLNVGVKQDVPNF 62 Query: 48 AEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 A ++G +VD + ++ + K+ Y+P+ + R + + ID+L Sbjct: 63 GYYSAKTNRYEGMEVDLAKKIADEL---RVKVNYIPVTTQTREPLMDNGTIDLLIGTYTI 119 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ S + Y D GF++ K GI+ +S L+G +I V G +T+ L +Y A Sbjct: 120 NDERKASYAI--SNPYYRDQIGFLVLKDSGINKISDLNGKTIGVAQGASTKAALQEYSSA 177 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 HN+K++ + E+ + AHR DA++ D S L + + IL + Sbjct: 178 HNLKFNYVQLGSYPELAVSLYAHRVDAFSVDKSILSGYESKKTK-----ILNEGFKTQDY 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG--ITQKNINQVSKDTT 269 A + + E + + L + N+ + Sbjct: 233 GIASSKSNQELIDYTNDLIAKWQKDGSLQKLYDKYNLKPAKAENK 277 >gi|293365707|ref|ZP_06612416.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|291316075|gb|EFE56519.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] Length = 271 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 82/254 (32%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K V L + + + + S + IK++G L + F V Sbjct: 4 KKWILVVCSMLASVVLVACQSGTDSSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAIAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K +S L+ A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKMSFLVRKADLDKYKDLSSLASANIAAQKGTVPETMVKEQLP----NAQ 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I + E +A + DA D + N + + A AI + Sbjct: 175 LISLTNMGEAVNELQAGKVDAVHMDEPVALSYAGKNSDLVVASVNLTMKDGEANAVAIKK 234 Query: 233 GDTEWYNIVSWTHY 246 ++ +V Sbjct: 235 DQSDLKAVVDKVIQ 248 >gi|223933820|ref|ZP_03625788.1| extracellular solute-binding protein family 3 [Streptococcus suis 89/1591] gi|330833684|ref|YP_004402509.1| extracellular solute-binding protein family 3 [Streptococcus suis ST3] gi|223897503|gb|EEF63896.1| extracellular solute-binding protein family 3 [Streptococcus suis 89/1591] gi|329307907|gb|AEB82323.1| extracellular solute-binding protein family 3 [Streptococcus suis ST3] Length = 267 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 70/221 (31%), Gaps = 20/221 (9%) Query: 1 MYKD-FFVSILCLIILFFTSFSTNA-------SILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F S+L I+ S+ ++L IK+ G ++ G ++ Sbjct: 1 MKKIAMFTSLLFAGIVLAACNSSAGISNSTDQTLLAQIKEEGVIQIGTEGAYAPYSYHDE 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 +G G+DV+ A++ + ++++ L + + D ++ T R+ Sbjct: 61 SGKLVGYDVEVAEAVAEKLGVK---VEFVETEWDSMIAGLDAARFDTIANQVGITDERKA 117 Query: 113 SLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F + + K I+S + LSG + AD + + Sbjct: 118 --KYDFSTPYTYIYGALVTQKDNTDITSFADLSGKKSANSLTS----NWADLARENG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 + + + R DA D + Sbjct: 170 EVVGVDGFSQAVELLNTGRVDATINDNLVYLDYVKQHADAP 210 >gi|332073835|gb|EGI84313.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus pneumoniae GA41301] Length = 278 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K V + + LF + T+ + + G ++ V + +G Sbjct: 1 MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D A+ + + P++ + L ID++ T R Sbjct: 61 YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172 +AF + Q + K GI++ ++G ++ QAG++ + Sbjct: 116 VAFSNSYMKNEQVLVTKKLSGITTAKDMNGKTLGAQAGSSGYADFEANPELLKNIVANKE 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++ E + R D D +++ + + A + Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARK 235 Query: 233 GDTEWYNIVSWT 244 DT ++ Sbjct: 236 EDTTLVKKINEA 247 >gi|317049374|ref|YP_004117022.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316950991|gb|ADU70466.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 278 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 87/264 (32%), Gaps = 19/264 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++ ++ + A L DIK G + GI+ + +G G+ Sbjct: 1 MKKTAW--LIAALLSVGSLAQAQADTLADIKSSGKITVGIDPTFPPYEYTDDSGAITGYS 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V ++ + + +++ L S + + + T R + F Sbjct: 59 VAIMQSFAKDLGVK---LEFQKTAFSGILPGLISGSFNAEGSSLNVTAERAK--KVLFTV 113 Query: 121 ITYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLA----DYFKAHNMK 170 G ++ + + + S LSG V+ + E L + KA Sbjct: 114 PYSKTVNGVLVREDEAKTFSGKTLSPESLSGLRGAVKTASVPEQLLKGFNDELKKAGKKP 173 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 I + +++ + R D DIS L + PS+ + ++ + A Sbjct: 174 ITIISVDSLDQTVSTLMTKRADFVYDDISVLAPVVKKY--PSKVAQVGEVGPSQWMGWAT 231 Query: 231 IQGDTEWYNIVSWTHYAMVTAEEL 254 + D +S AM EL Sbjct: 232 RKEDGSLNKALSDHILAMQKDGEL 255 >gi|229846112|ref|ZP_04466224.1| amino acid ABC transporter periplasmic-binding protein [Haemophilus influenzae 7P49H1] gi|229811116|gb|EEP46833.1| amino acid ABC transporter periplasmic-binding protein [Haemophilus influenzae 7P49H1] Length = 257 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 84/249 (33%), Gaps = 13/249 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L ++ F++FS I +++ L G F +G GFD Sbjct: 1 MKKLLFTTALLTGVIAFSTFSHAGEIADRVEQTKTLLVGTEGTYAPFTFHDKSGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R ++ + K+++ + L +K+ D+++ T E +F Sbjct: 61 VEVIRKVAEKLG---LKVEFKETQWDAMYAGLNAKRFDVIANQT--NPSPERLKKYSFTT 115 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + I S L G + KA +V + + Sbjct: 116 PYNYSGGVIVTKSSDNSIKSFEDLKGRKSA----QSATSNWGKDAKAAG--AQILVVDGL 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R +A D A+ + I D K+P A A +QG+ Sbjct: 170 AQSLELIKQGRAEATINDKLAVLDYFKQHPNSG-LKIAYDRGDKTPTAFAFLQGEDALIT 228 Query: 240 IVSWTHYAM 248 + A+ Sbjct: 229 KFNQVLEAL 237 >gi|313124053|ref|YP_004034312.1| ABC amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280616|gb|ADQ61335.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 286 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 79/229 (34%), Gaps = 8/229 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77 S S K+ + G+ F G +GF++D A++ I SK Sbjct: 30 CSSKQESSYARAKQSKQITWGVRPDTKLFGLTNIKTGKIEGFEIDLATAITKQILGPKSK 89 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + P+ K R L + +D + T R + F + + + I+ K I Sbjct: 90 AVFRPITEKTRITLLHNGSLDAVISTMTITKER--MKVIDFSDVYFNANESMIVKKSSKI 147 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S++ L+ + V A T+ +A+ K F+ A +A + D D Sbjct: 148 RSIADLNKKGVVVIAIKGTD--VANQVAKLAPKASVKQFDDYGSAFNALKAGQGDVMIDD 205 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 L L E + +++ P + +G TE ++ Sbjct: 206 NGILAGLIADTP---EFTLTKASLAEEPYGIGVEKGQTEMRQAINQALK 251 >gi|260868512|ref|YP_003234914.1| putative periplasmic binding transport protein FliY [Escherichia coli O111:H- str. 11128] gi|257764868|dbj|BAI36363.1| putative periplasmic binding transport protein FliY [Escherichia coli O111:H- str. 11128] Length = 266 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 14 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 74 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + + L G + V GT E ++ + + ++ Sbjct: 129 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ + +G+ + V+ Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVTLRKGNEDLLKAVNDA 242 Query: 245 H 245 Sbjct: 243 I 243 >gi|322388044|ref|ZP_08061650.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus infantis ATCC 700779] gi|321141065|gb|EFX36564.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus infantis ATCC 700779] Length = 280 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 88/251 (35%), Gaps = 13/251 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K + ++ + F + AS +++ + G + V + NG + Sbjct: 3 RKKISLVLVFFLAFFLVGCTQKASNPKVDNWEKYQQQESITIGFDNTFVPMGFEEKNGQY 62 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D +A+S + K+Q+ P++ + LQ+ ID + T R + Sbjct: 63 VGFDIDLAQAVSEKLG---FKVQFQPIDWDMKETELQNGTIDAIWNGYSATDER--REKV 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHP 173 AF + Q + K + I SVS ++G + QAG++ + + Sbjct: 118 AFTIPYMENQQVLVSKKSQNIQSVSDMTGKVLGAQAGSSGYIDFEARPELLKNIVKDQKA 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 ++ E + R DA D T ++ I+P A + Sbjct: 178 NQYQSFNEALIDLQNDRIDALLIDRVYANYYLETEGILDQYEIIPAGFESESFAVGVRPA 237 Query: 234 DTEWYNIVSWT 244 D ++ Sbjct: 238 DKTLLANLNKA 248 >gi|271498823|ref|YP_003331848.1| family 3 extracellular solute-binding protein [Dickeya dadantii Ech586] gi|270342378|gb|ACZ75143.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech586] Length = 256 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 79/246 (32%), Gaps = 14/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++L +L + + L IK G +K G + A+G GFD Sbjct: 1 MKKS-RLALLTGALLVTSVLAQAQDDLSAIKAAGVIKFGTEGTYAPYTYHDASGKLVGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RA++ + ++ + +K+ D + T R + F Sbjct: 60 VDVGRAVAEKLGVKAE---FVEGRWDGLIAGVDAKRYDAVINQVGVTKER--QVKYDFSK 114 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ I S + L G Q+ T+ LA + A + + Sbjct: 115 PYIDAKSVLIVRGDNSSIKSFNDLKGHKSA-QSLTSNYSKLATSYGA-----EIVPTDGF 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R +A D + K ++ S P A + + + + Sbjct: 169 NQSLELVLSGRAEATLNDNLSFLDFKKHKPDA-NVKVVATAESGDPSAILVRKNQPQLVD 227 Query: 240 IVSWTH 245 ++ Sbjct: 228 ALNKAL 233 >gi|313125641|ref|YP_004035911.1| amino acid ABC transporter substrate-binding protein, paat family [Halogeometricum borinquense DSM 11551] gi|312292006|gb|ADQ66466.1| amino acid ABC transporter substrate-binding protein, PAAT family [Halogeometricum borinquense DSM 11551] Length = 300 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 38/228 (16%), Positives = 71/228 (31%), Gaps = 16/228 (7%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G + F +G+ KGFDV+ +A+ + ++ + +L S Sbjct: 63 KVVIGSDIPYRPFEYETTSGELKGFDVEIAQAVFEEELG--VEYEFKKTSFDSIIPSLNS 120 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 + I+ R+ + F + Q I+ K ISS L GA+I VQ GT Sbjct: 121 GRFRIIMSAMTINEKRKE--KVDFSEPYFTAYQTVIIKKDSSISSKEDLKGATIGVQKGT 178 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T + + ++++ A + DA D + D Sbjct: 179 TGASAAEELKTEFDGDLTLKKYDQIPSAFQALINGQIDAIVNDNTVNSEFADKRDDVVFL 238 Query: 215 VILPD------------IISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 ++ + D E+ V+ A+ Sbjct: 239 EGEGAAAAEGENAPPYLTLTVENYGIGFRKADDEFRKKVNEALAAVKE 286 >gi|161505143|ref|YP_001572255.1| hypothetical protein SARI_03280 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866490|gb|ABX23113.1| hypothetical protein SARI_03280 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 246 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 89/260 (34%), Gaps = 28/260 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L + + S S L G + + V A+ GFD Sbjct: 1 MKKKLIAMLLASLSVHAASVSA-----------KILHFGTSATYAPYEFVDADNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + ++ + + L+ ++ D + D T RE ++F Sbjct: 50 IDVANAVCKEM---QAECSFTNQSFDSLIPGLRFRKFDAVIAGMDMTPKRE--QQVSFSQ 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ +K + + L G + ++ GTT + L D KA P+ ++ Sbjct: 105 PYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQDKQKA----ITPVAYDSYL 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-----ISKSPLAPAIIQGDT 235 + +R + GD + A+ ++ I+ + L A+ +G+ Sbjct: 161 NAFTDLKNNRLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGEGLGIAVRKGND 217 Query: 236 EWYNIVSWTHYAMVTAEELG 255 ++ + + E Sbjct: 218 ALLQEINAALDKVKASPEYA 237 >gi|149011735|ref|ZP_01832931.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP19-BS75] gi|182684455|ref|YP_001836202.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CGSP14] gi|303254161|ref|ZP_07340274.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS455] gi|303260723|ref|ZP_07346683.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP-BS293] gi|303263050|ref|ZP_07348982.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS292] gi|303264454|ref|ZP_07350374.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS397] gi|303267432|ref|ZP_07353286.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS457] gi|303269793|ref|ZP_07355542.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS458] gi|147764166|gb|EDK71098.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP19-BS75] gi|182629789|gb|ACB90737.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CGSP14] gi|302598887|gb|EFL65920.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS455] gi|302635813|gb|EFL66316.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS292] gi|302638126|gb|EFL68601.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP-BS293] gi|302640686|gb|EFL71084.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS458] gi|302643023|gb|EFL73316.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS457] gi|302646266|gb|EFL76493.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS397] Length = 278 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K V + + LF + T+ + + G ++ V + +G Sbjct: 1 MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGS 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D A+ + + P++ + L ID++ T R Sbjct: 61 YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172 +AF + Q + K GI++ ++G ++ QAG++ + Sbjct: 116 VAFSNSYMKNEQVLVTKKLSGITTAKDMTGKTLGAQAGSSGYADFEANPELLKNIVANKE 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++ E + R D D +++ + + A + Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARK 235 Query: 233 GDTEWYNIVSWT 244 DT ++ Sbjct: 236 EDTTLVKKINEA 247 >gi|116751320|ref|YP_848007.1| extracellular solute-binding protein [Syntrophobacter fumaroxidans MPOB] gi|116700384|gb|ABK19572.1| extracellular solute-binding protein, family 3 [Syntrophobacter fumaroxidans MPOB] Length = 252 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 90/264 (34%), Gaps = 15/264 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V ++C + + + + + GI+ FA V G GFD Sbjct: 1 MGKKVLVCLVCALSMLLFGNAPSGMAQEKV-----YVNGIDANFPPFAFVDKTGKPDGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V ++ + K+ + P++ +L +K+IDI++ T R + F Sbjct: 56 VAALDWIAKEMG---FKVTHKPMDWDGIIPSLNAKKIDIIASGMSITEARRK--EVNFTE 110 Query: 121 ITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADY-FKAHNMKYHPIVFER 178 + Q + K + + + G I VQ GTT + + KA K+ + ++ Sbjct: 111 PYWKITQVLVAKKDSAATPETAMKDGQKIGVQRGTTEAKWIEENLIKAQGKKFELVYYDS 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R A D K + +I + A+ + DTE Sbjct: 171 APLAVEDVVNGRIVAAAMDD---APAKDAEKKKPVKIIGSFGMPDETFGYAVRKEDTELL 227 Query: 239 NIVSWTHYAMVTAEELGITQKNIN 262 ++ + + E + +K Sbjct: 228 KKLNEGLKKLQASPEWDVLRKKYE 251 >gi|327392853|dbj|BAK10275.1| cystine-binding periplasmic protein precursor FliY [Pantoea ananatis AJ13355] Length = 261 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 104/269 (38%), Gaps = 25/269 (9%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + + A L DI+KRG L+ + F V + +G+D+D + L+ + K+ Sbjct: 18 AGNVLADQLQDIQKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMAKYLAKQM---KLKL 74 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Q +P+ + R LQ+ ++D++ + RE + F G K + Sbjct: 75 QLVPVTSANRVPYLQTDKVDLVISSMGKNPEREKV--IDFSRAYAPFFLGVFGPKGDHLK 132 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + LSG S+ V G ++ L++ +E +AY + + Sbjct: 133 DAAALSGKSVGVTRGAVEDMVLSEVAPK---DAQVKRYEDNNTTLSAYLSGQVQYVATGN 189 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + A+ T P++ + ++ SP + + + + V+ E GI Sbjct: 190 LVVAAI--TRQNPAKAPVAQFMLKDSPCYIGLKKDEPALKDKVNTLI-------EQGIKD 240 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGE 287 +N++S++ +L +N+G Sbjct: 241 GTLNKMSEE--------WLKAPLPANLGA 261 >gi|163800418|ref|ZP_02194319.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio sp. AND4] gi|159175861|gb|EDP60655.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio sp. AND4] Length = 247 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 87/258 (33%), Gaps = 21/258 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L + + + +K + F + N +GFD Sbjct: 1 MKKILLASLIGLSSVTMAANAAAQE---------EIKFAMEATYAPFEYMDENNQIQGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + ++ + + AL+ K+ D D T R + F Sbjct: 52 VDLANALCKEM---EAQCTFHNQSFDSLIPALKFKRYDAAISAMDITDAR--LKQVNFSA 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ K+ ++ L G + VQ G+T + L + + + + Sbjct: 107 PYYDNSAAFVSIKE-KVADQKALEGKRVGVQNGSTHQSYLIEQMP----GVTAVPYSSYQ 161 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238 + ++ R D+ GD + + D + + + A+ +G+ E Sbjct: 162 DAFIDMKSGRIDSVFGDTAVVAEWFKKEDNLAYVGEHVTNPKYFGNGFGIAVNKGNDELV 221 Query: 239 NIVSWTHYAMVTAEELGI 256 + ++ + E + Sbjct: 222 SKLNTALNKVKANGEYDV 239 >gi|306833818|ref|ZP_07466943.1| polar amino acid uptake family ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus bovis ATCC 700338] gi|304424012|gb|EFM27153.1| polar amino acid uptake family ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus bovis ATCC 700338] Length = 278 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 86/276 (31%), Gaps = 20/276 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG------DIKKRGFLKCGINTGLVGFAE---VK 51 M L + S S DIK +G L +N F V Sbjct: 3 MKVSKLFGGLAVAAASLFLLSACGSSSSEDTSVSDIKDKGTLVVALNPEFAPFEFKTLVD 62 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G DV+ +A++ + D +++ ++ +LQS + DI T R+ Sbjct: 63 GKDTIVGADVEIAKAIAEELGVD---VKFSSMSFNNVLASLQSGKADIAISGISATEERK 119 Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y ++ K + L G S+ Q G+ E ++ Sbjct: 120 K--AYDFSDPYYEAENVVLIRKTDVDKYTDTDSLDGLSVGTQKGSIQETVASEQLA---- 173 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + E+ + + +A + N + I A A Sbjct: 174 GAKVVSLTQNSEMINELKNSQIEAVVLEKPIAEGYVANNSDLTIAGITLTSDDADAYAVA 233 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + +G T+ V+ + + ++ +N ++S Sbjct: 234 LPKGSTKLTKKVNKVIKELKESGKINQFIQNAYELS 269 >gi|152974511|ref|YP_001374028.1| extracellular solute-binding protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023263|gb|ABS21033.1| extracellular solute-binding protein family 3 [Bacillus cytotoxicus NVH 391-98] Length = 265 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F Sbjct: 1 MKKLFSVLAVATLAVGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDT 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELSEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSNPYVSSSAALVIAKDKDKPATFTDVKGLK-AAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + E + + R D +T + L + + I+ S Sbjct: 170 EIVGVEGFSQAAELLNSGRVD-FTINDKLSVLNYLETKKDANIKIVDTEKEASQSGFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G + V+ Sbjct: 229 KGSGKLVQEVNKAL 242 >gi|49183381|ref|YP_026633.1| amino acid ABC transporter solute binding protein [Bacillus anthracis str. Sterne] gi|49476792|ref|YP_034686.1| amino acid ABC transporter periplasmic amino acid-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65317795|ref|ZP_00390754.1| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Bacillus anthracis str. A2012] gi|165871367|ref|ZP_02216015.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0488] gi|167634261|ref|ZP_02392583.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0442] gi|167640128|ref|ZP_02398395.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0193] gi|170688342|ref|ZP_02879551.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0465] gi|170708927|ref|ZP_02899360.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0389] gi|177653666|ref|ZP_02935805.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0174] gi|190567575|ref|ZP_03020488.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis Tsiankovskii-I] gi|218901560|ref|YP_002449394.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH820] gi|227813035|ref|YP_002813044.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. CDC 684] gi|228913105|ref|ZP_04076744.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229602677|ref|YP_002864982.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0248] gi|254686756|ref|ZP_05150614.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. CNEVA-9066] gi|254724832|ref|ZP_05186615.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A1055] gi|254739021|ref|ZP_05196723.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Western North America USA6153] gi|254740745|ref|ZP_05198435.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Kruger B] gi|254756135|ref|ZP_05208164.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Vollum] gi|254761953|ref|ZP_05213802.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Australia 94] gi|291612199|ref|YP_003541014.1| putative amino acid ABC transporter substrate-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49177308|gb|AAT52684.1| amino acid ABC transporter, solute binding protein [Bacillus anthracis str. Sterne] gi|49328348|gb|AAT58994.1| bacterial extracellular solute-binding protein, family 3; amino acid ABC transporter, periplasmic amino acid-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|164712851|gb|EDR18380.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0488] gi|167511939|gb|EDR87318.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0193] gi|167530575|gb|EDR93290.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0442] gi|170126160|gb|EDS95054.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0389] gi|170667674|gb|EDT18428.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0465] gi|172081246|gb|EDT66321.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0174] gi|190561362|gb|EDV15334.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis Tsiankovskii-I] gi|218536809|gb|ACK89207.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH820] gi|224552853|gb|ACN55065.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|227004643|gb|ACP14386.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. CDC 684] gi|228846510|gb|EEM91523.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229267085|gb|ACQ48722.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0248] Length = 264 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESATTSSNGKKEFRYAMSGLYKPFNYKENDGKLVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + P+ I + L++K+ D++ + T R + F Sbjct: 61 FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KHTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|239821013|ref|YP_002948198.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239805866|gb|ACS22932.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 280 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 43/255 (16%), Positives = 90/255 (35%), Gaps = 13/255 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDV 61 ++ F L S +A DI R L+CG + FA + G DV Sbjct: 4 RNVFRLTTIGTCLCAASLLAHADQWSDISARKELRCGTFADVPPFAAPDPKTREMVGHDV 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D C AL+ + + PL+ + R ++ ++D+ N +T R + F Sbjct: 64 DLCHALAKELG---LTAKVTPLSVEARVPEVKLGRVDVTIANLAYTKSR--GEQIQFSDP 118 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y + + ++ + G + G+T+EL++ P+ F+ Sbjct: 119 YYVAKEMLAVKASDPGAAKADFKGKRLSSTKGSTSELSIK------MNGSEPVTFQDTGS 172 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + ++ + + L + ++ + + P+ + + + Sbjct: 173 AFMAVQQNKSVGMVANTMTITKLVNQSKTEGVALKMIKEPMVLQPIGIGMKKDEPVLLAK 232 Query: 241 VSWTHYAMVTAEELG 255 V+ YA+ + EL Sbjct: 233 VNGALYALEKSGELD 247 >gi|22124840|ref|NP_668263.1| solute-binding protein of ABC transporter [Yersinia pestis KIM 10] gi|45440527|ref|NP_992066.1| putative amino acid ABC transporter periplasmic protein [Yersinia pestis biovar Microtus str. 91001] gi|108808739|ref|YP_652655.1| putative amino acid ABC transporter periplasmic protein [Yersinia pestis Antiqua] gi|108811004|ref|YP_646771.1| amino acid ABC transporter, periplasmic protein [Yersinia pestis Nepal516] gi|145600152|ref|YP_001164228.1| amino acid ABC transporter, periplasmic protein [Yersinia pestis Pestoides F] gi|149364902|ref|ZP_01886937.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis CA88-4125] gi|165926628|ref|ZP_02222460.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165936051|ref|ZP_02224621.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|166011108|ref|ZP_02232006.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166212982|ref|ZP_02239017.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167398531|ref|ZP_02304055.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421596|ref|ZP_02313349.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423593|ref|ZP_02315346.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468796|ref|ZP_02333500.1| amino acid ABC transporter, periplasmic protein [Yersinia pestis FV-1] gi|218930282|ref|YP_002348157.1| putative amino acid ABC transporter periplasmic protein [Yersinia pestis CO92] gi|229838868|ref|ZP_04459027.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896361|ref|ZP_04511530.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis Pestoides A] gi|229899437|ref|ZP_04514580.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901223|ref|ZP_04516345.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis Nepal516] gi|270489411|ref|ZP_06206485.1| bacterial extracellular solute-binding protein, family 3 [Yersinia pestis KIM D27] gi|294504973|ref|YP_003569035.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis Z176003] gi|21957669|gb|AAM84514.1|AE013696_7 putative solute-binding protein of ABC transporter [Yersinia pestis KIM 10] gi|45435384|gb|AAS60943.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis biovar Microtus str. 91001] gi|108774652|gb|ABG17171.1| amino acid ABC transporter, periplasmic protein [Yersinia pestis Nepal516] gi|108780652|gb|ABG14710.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis Antiqua] gi|115348893|emb|CAL21850.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis CO92] gi|145211848|gb|ABP41255.1| amino acid ABC transporter, periplasmic protein [Yersinia pestis Pestoides F] gi|149291315|gb|EDM41389.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis CA88-4125] gi|165916196|gb|EDR34803.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|165921556|gb|EDR38753.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165990108|gb|EDR42409.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166205769|gb|EDR50249.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166960515|gb|EDR56536.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051035|gb|EDR62443.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057763|gb|EDR67509.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229681152|gb|EEO77246.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis Nepal516] gi|229687839|gb|EEO79912.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695234|gb|EEO85281.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700637|gb|EEO88667.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis Pestoides A] gi|262363037|gb|ACY59758.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis D106004] gi|262366961|gb|ACY63518.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis D182038] gi|270337915|gb|EFA48692.1| bacterial extracellular solute-binding protein, family 3 [Yersinia pestis KIM D27] gi|294355432|gb|ADE65773.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis Z176003] gi|320016446|gb|ADW00018.1| putative amino acid ABC transporter, periplasmic protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 262 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 90/244 (36%), Gaps = 12/244 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K L+++ + + A L I++RG L+ + F V + +G+D+ Sbjct: 4 KKRMLWLWAVLVLV--QAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYDI 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L+ + K+Q + + + R LQ+ ++D++ + RE +AF Sbjct: 62 DMAQYLADKM---KLKLQLVSVTSANRVPYLQTDKVDLVISSLGKNPEREK--AIAFSRA 116 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G K + QL+G +I V G ++ L++ +E Sbjct: 117 YAPFFLGVFGAKDDELKQPEQLAGKTIGVTRGAVEDMVLSEIAPKA---AQIRRYEDNNT 173 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +AY + + + + AL P + + ++ SP + QG+ V Sbjct: 174 TLSAYLSGQVNYLATGNLVISALARQ--NPKQAPVAKFMLKDSPCYIGLRQGEPALKAKV 231 Query: 242 SWTH 245 Sbjct: 232 DALI 235 >gi|229081413|ref|ZP_04213915.1| Arginine-binding extracellular protein artP [Bacillus cereus Rock4-2] gi|228701903|gb|EEL54387.1| Arginine-binding extracellular protein artP [Bacillus cereus Rock4-2] Length = 259 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 88/254 (34%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N + L G + + V A+ + G Sbjct: 1 MKKLVSISFALILIVSIFSACSNEESKETKGNKKVLVMGTSADYKPYEYVDASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E +++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKASEF--KKQVDFQVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|78067960|ref|YP_370729.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77968705|gb|ABB10085.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 260 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 69/254 (27%), Gaps = 14/254 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ ++ + + A L IK G + G F G GFD Sbjct: 1 MKFLRSILVVAMLQAVSVTSALAADDLSQIKSSGVFRVGTEGTYAPFTYHDETGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + P Q++ L + D + T R+ F Sbjct: 61 VDIATAIAQRLGVKP---QFVEGKWDGLIAGLDVNRYDAVVNEVSITDARKA--KYDFST 115 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ I S L G T+ LA A + + Sbjct: 116 PYITSRAVLIVRADNTTIRSFDDLKGKKSA-NTLTSNFGKLAASHGA-----DVVPVQGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWY 238 E + R DA D + + V D + +G Sbjct: 170 NEAIDLLSSGRVDATINDSLSYLDFRKHKPDAKLKVAATDTGGASDASGVLLRKGSPALV 229 Query: 239 NIVSWTHYAMVTAE 252 V A + A+ Sbjct: 230 AAVDKAL-ADIKAD 242 >gi|261246087|emb|CBG23889.1| glutamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] Length = 248 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 82/245 (33%), Gaps = 20/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFDV+ Sbjct: 2 KSLLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVE 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K ID+ T R+ + F Sbjct: 53 LWDAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ I SV L G + V++GT + DY KA+ F ++ Sbjct: 108 YKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + + + A +G E V Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGESLEAQQYGVAFPKGSDELREKV 222 Query: 242 SWTHY 246 + Sbjct: 223 NGALK 227 >gi|206974287|ref|ZP_03235204.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus H3081.97] gi|217957950|ref|YP_002336494.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH187] gi|206747527|gb|EDZ58917.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus H3081.97] gi|217063393|gb|ACJ77643.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH187] Length = 264 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESATTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + P+ I + L++K+ D++ + T R + F Sbjct: 61 FDVELGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KHTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|16765292|ref|NP_460907.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167993523|ref|ZP_02574617.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|4115511|dbj|BAA36399.1| FliY [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16420489|gb|AAL20866.1| putative periplasmic binding transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205328406|gb|EDZ15170.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261247120|emb|CBG24943.1| cystine-binding periplasmic protein (FliY) [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993940|gb|ACY88825.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158468|emb|CBW17978.1| cystine-binding periplasmic protein (FliY) [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912944|dbj|BAJ36918.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224597|gb|EFX49660.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130232|gb|ADX17662.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 266 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 83/254 (32%), Gaps = 20/254 (7%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M V + L+ + +L +K+RG L G+ F+ + Sbjct: 1 MKLALLGRQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGED 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+VDF AL+ + P +L +K+ID++ + +R+ Sbjct: 61 GKLTGFEVDFAEALAKHLGVKA---SLKPTKWDGMLASLDAKRIDVVINQVTISDVRKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I + + L G + V GT E L + Sbjct: 117 -KYDFSTPYTVSGIQALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGV 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + D S+ A+ Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALR 229 Query: 232 QGDTEWYNIVSWTH 245 +G+ + V Sbjct: 230 KGNEDLLKAVDNAI 243 >gi|331673438|ref|ZP_08374206.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli TA280] gi|331069636|gb|EGI41023.1| cystine ABC transporter, cystine-binding periplasmic protein [Escherichia coli TA280] Length = 285 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 85/241 (35%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 33 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 92 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 93 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 147 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + + L G + V GT E ++ + + ++ Sbjct: 148 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 203 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 204 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 261 Query: 245 H 245 Sbjct: 262 I 262 >gi|284048792|ref|YP_003399131.1| extracellular solute-binding protein family 3 [Acidaminococcus fermentans DSM 20731] gi|283953013|gb|ADB47816.1| extracellular solute-binding protein family 3 [Acidaminococcus fermentans DSM 20731] Length = 255 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 79/257 (30%), Gaps = 12/257 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M K + ++ + + ++ L G F G+ GF Sbjct: 1 MKKILAAICIFAALMGTLGCGGSQTAGNKPAEKKELIVGTEPSFAPFEFPDKKSGEITGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D++ +A+ +K+ + AL + ID+ T R+ + F Sbjct: 61 DMELIKAMGKKAGF--AKVTVKGMGFDALIPALDAGNIDVAIAGMSITDARK--QKVNFT 116 Query: 120 PITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ K I S++ L G +I VQ GTT A F+ Sbjct: 117 DPYYESGLATLVRKDNTTIKSLNDLKGKTIAVQLGTTGAEAAGKIEGA-----TVKTFDT 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + DA D+ L L ++ + A + + + Sbjct: 172 SDTACLELKNGGADAVISDLPVLQ-YFLKQGGGEYAKMVGEPTKGDMYGIATAKKNKDLA 230 Query: 239 NIVSWTHYAMVTAEELG 255 + ++ + + E Sbjct: 231 DKLNKALADLKKSGEYQ 247 >gi|238758079|ref|ZP_04619259.1| Cystine-binding periplasmic protein [Yersinia aldovae ATCC 35236] gi|238703617|gb|EEP96154.1| Cystine-binding periplasmic protein [Yersinia aldovae ATCC 35236] Length = 272 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 84/248 (33%), Gaps = 15/248 (6%) Query: 2 YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + ++ L + + S+LG +K+RG L G+ F+ +G GF Sbjct: 13 RRKAALGMMALTLAAGLNVKSYAADSLLGQVKERGTLIVGLEGTYPPFSFQGEDGKLTGF 72 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VDF L+ + ++ P +L+SK+ID+ + R+ F Sbjct: 73 EVDFANELAEHMGVK---VKLAPTKWDGMLASLESKRIDVAINQVTISDERKK--KYDFS 127 Query: 120 PITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G + K + L G + V G+ E L +A+ ++ Sbjct: 128 TPYTISGIQVLTKKGNEGRFTKPEDLEGKKVGVGLGSNYEQWL----RANLKGVDIRTYD 183 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R R DA D L AL L + ++ A+ + + E Sbjct: 184 DDPTKYQDLRVGRTDAILVDR--LAALDLVKKTHDTLAVAGPAFARQESGVALRKNNPEL 241 Query: 238 YNIVSWTH 245 ++ Sbjct: 242 LAAINKAI 249 >gi|229168898|ref|ZP_04296615.1| Arginine-binding extracellular protein artP [Bacillus cereus AH621] gi|228614490|gb|EEK71598.1| Arginine-binding extracellular protein artP [Bacillus cereus AH621] Length = 259 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 92/258 (35%), Gaps = 13/258 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N + K + L G + + V+A+ + G Sbjct: 1 MKKLLSISFALILIVSMFSACSNGEEKANGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ F Sbjct: 61 FDVDIAKYIGKELGYE---VKVKDMDFGGLLASLNSGKVDFVMAGMTPTAERK--NNADF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I S+ L G + VQ G+ E ++ K + K +R Sbjct: 116 TDIYFVAKNMIVSKKGSNIKSLEDLKGKKVGVQTGSIQEEKAKEFQKQVDFKAEGR--DR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII-QGDTEW 237 + EI +A R DA + + E + + + AI +++ Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMK---ELQGIEIQEAPEEVGAAIALSKNSDK 230 Query: 238 YNIVSWTHYAMVTAEELG 255 + M E+ Sbjct: 231 TEEFNKVIKKMQENGEMD 248 >gi|260587479|ref|ZP_05853392.1| glutamine ABC transporter, substrate binding protein [Blautia hansenii DSM 20583] gi|331084134|ref|ZP_08333240.1| hypothetical protein HMPREF0992_02164 [Lachnospiraceae bacterium 6_1_63FAA] gi|260541744|gb|EEX22313.1| glutamine ABC transporter, substrate binding protein [Blautia hansenii DSM 20583] gi|330401989|gb|EGG81562.1| hypothetical protein HMPREF0992_02164 [Lachnospiraceae bacterium 6_1_63FAA] Length = 282 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 89/262 (33%), Gaps = 28/262 (10%) Query: 1 MYKDFFVSILCLIILFF--TSFSTNASILGDIKK-------------RGFLKCGINTGLV 45 M K + + +++ F ++ N S +K R G + Sbjct: 1 MKKRIALILTGTMLMGFVLSACGDNESTEKKDEKTENSVETSSNANNRTTFTVGFDAEYP 60 Query: 46 GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 + + NG++ GFD++ A+ + K P+N + + L S ID + Sbjct: 61 PYGYMDENGEYTGFDLELAEAVCKLEGWELVK---KPINWDAKDMELNSGAIDCIWNGFT 117 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 + F + Q ++ + GI++ L+G ++ VQA + L K Sbjct: 118 MNGREDE---YTFSTPYVDNSQVIVVAENSGINTPEDLAGKTVGVQAASAALELLQSDEK 174 Query: 166 A-----HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 + F +A DA D A R + IL + Sbjct: 175 DGQKALADTFGALNEFADYNTAFTELQAGALDALAID--IGVANYQIKSRGEGYKILEET 232 Query: 221 ISKSPLAPAIIQGDTEWYNIVS 242 ++ A A +GD E ++V+ Sbjct: 233 LNTEQYAIAFKKGDQELRDVVN 254 >gi|329117390|ref|ZP_08246107.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Streptococcus parauberis NCFD 2020] gi|326907795|gb|EGE54709.1| bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein [Streptococcus parauberis NCFD 2020] Length = 271 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 98/224 (43%), Gaps = 11/224 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++ + I+K G ++ G+ + F + G ++G +V+ + ++ ++ + Sbjct: 33 SSKEIKKIQKAGIIRVGVKQDVPNFGYYSPDTGKYEGMEVEIAKDIAKSLGVKAE---FT 89 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + A+ R L + Q+D++ T E +F Y D GF+++K G S+ Sbjct: 90 AVTAQTREALLDNGQLDMIIATYTITP--ERQANYSFSKPYYLDEVGFLVNKSDGFKSIK 147 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+ +I V G+TT++ + ++ KA+N+ + + E+ + + R A++ D S L Sbjct: 148 SLNNKTIGVAQGSTTKVAIEEFGKANNLHFKFVQLGSYPELAISLYSTRISAFSVDKSIL 207 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + IL D ++ A + + N ++ Sbjct: 208 TGYQSKQTQ-----ILSDGFNQQAYGIASTKANKNLTNYINDLI 246 >gi|323936600|gb|EGB32887.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1520] Length = 260 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 96/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L++ T+ S+ A++ ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSIL--ALSLLVGLSTAASSYAALPE------TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E + +++ + + + Sbjct: 108 KLYAADSRLISAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L + + + + D Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257 >gi|229013365|ref|ZP_04170505.1| Arginine-binding extracellular protein artP [Bacillus mycoides DSM 2048] gi|228747958|gb|EEL97823.1| Arginine-binding extracellular protein artP [Bacillus mycoides DSM 2048] Length = 259 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 89/254 (35%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N K + L G + + V+A+ + G Sbjct: 1 MKKLLSISFALILIVSIFSACSNGEEKATGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ F Sbjct: 61 FDVDIAKYIGKELGYE---VKVKDMDFGGLLASLNSGKVDFVMAGMTPTAERK--NNADF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I S+ L G + VQ G+ E ++ K + K +R Sbjct: 116 TDIYFVAKNMIVSKKGSNIKSLEDLKGKKVGVQTGSIQEEKAKEFQKQVDFKAEGR--DR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKE-LQGIEIQEAPEEVGAAIALPKNSDKTE 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|229083653|ref|ZP_04215978.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus Rock3-44] gi|228699671|gb|EEL52331.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus Rock3-44] Length = 264 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 85/253 (33%), Gaps = 18/253 (7%) Query: 1 MYKDFFVSILCLIILF---FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F + + + + S +S ++ + ++ F + +G Sbjct: 1 MRKKIFTVVAAITLCASFILGACSKESSTTSGGGEK-EFRYAMSGLYKPFNFKENDGKLV 59 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDV+ AL+ + P + + L++K+ D++ + T + + Sbjct: 60 GFDVEIGEALAKKMGMKPVPVT---NPWETLIQGLKAKKYDVILGSMAITE--DRLKAVN 114 Query: 118 FRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y G F+ K ISS L G + V +T + +A + Sbjct: 115 FSNPYYRSGAQIFVDKKNNSISSAEDLKGKKVGVVKASTFKALVA------KQTNQITEY 168 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + R DA D + L++ + S ++ + AI + D E Sbjct: 169 DSDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKE 226 Query: 237 WYNIVSWTHYAMV 249 V+ ++ Sbjct: 227 MVKKVNKALDEII 239 >gi|289422666|ref|ZP_06424506.1| arginine-binding periplasmic protein 2 [Peptostreptococcus anaerobius 653-L] gi|289156845|gb|EFD05470.1| arginine-binding periplasmic protein 2 [Peptostreptococcus anaerobius 653-L] Length = 281 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 43/283 (15%), Positives = 94/283 (33%), Gaps = 28/283 (9%) Query: 1 MYKDF-------FVSILCLIILFFT---SFSTNASI-LGDIKKRGFLKCGINTGLVGFAE 49 M K V+++ L ++ + + ++ L I+ L G + F Sbjct: 1 MKKGLKKLAALGLVAVMALGMVACGKKDAGANSSQTALAKIQANKKLVLGTSPDYPPFEF 60 Query: 50 V---KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + G+ G D++ + L+ + + ++ ++ ALQS ++D++ Sbjct: 61 LVSEGGKGNVVGADIELAKKLAEKMGVE---LEIKTIDFDALIPALQSGKVDVVITGMSP 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F I + G I+ K + L A + VQ G+T E + D Sbjct: 118 TEERKK--NIDFSDIYFQGKNGVIVKKGDAGKYKTEDDLKKAKLGVQKGSTQETYIKDTL 175 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 K K V ++ + DA + D + + Sbjct: 176 KVIGYKG----LTAVPDLVMDLKNGNVDAIVLNDKVAGINATKYDGVEIVKDIKMTSAGE 231 Query: 225 PLAPAI---IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 A AI + + +++ + + E + ++ Sbjct: 232 EEAMAIAVKKGDNKDLIELMNKVIKDLNASGEYDKILADAVEL 274 >gi|170746458|ref|YP_001752718.1| extracellular solute-binding protein [Methylobacterium radiotolerans JCM 2831] gi|170652980|gb|ACB22035.1| extracellular solute-binding protein family 3 [Methylobacterium radiotolerans JCM 2831] Length = 302 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 36/256 (14%), Positives = 84/256 (32%), Gaps = 8/256 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + L + S L I+ G + G F + N G+ Sbjct: 1 MSRTLPLLLATLCWAGLAAPSAAEGRLDKIRATGQISLGFPDASPPFGFLDQNAKPVGYS 60 Query: 61 VDFCRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 ++ C ++ + + +++++P+ + R + + ID+ R + Sbjct: 61 LEICEHVAQKLKAVLGMNKLEVRHVPVMSATRIPLINNGTIDLECGTASNLPERHKL--V 118 Query: 117 AFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 +F P T+ + K + ++ G +I QAG T+ + + Sbjct: 119 SFAPTTFVAQVVLVAKKDTPVDVDDIASFRGKAISAQAGGETQRVATRINVRDKLDIQVM 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E+ R D + +A RP+++ I + +P + D Sbjct: 179 PAKDTAEVFLLVETGRAAGAINDDALAHATVAGAKRPADYKIGTKGLEFAPYGILEPKDD 238 Query: 235 TEWYNIVSWTHYAMVT 250 + V ++ Sbjct: 239 AAFKAAVDKAVVELIQ 254 >gi|296333448|ref|ZP_06875901.1| High affinity arginine ABC transporter binding lipoprotein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675046|ref|YP_003866718.1| high affinity arginine ABC transporter binding lipoprotein [Bacillus subtilis subsp. spizizenii str. W23] gi|296149646|gb|EFG90542.1| High affinity arginine ABC transporter binding lipoprotein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413290|gb|ADM38409.1| High affinity arginine ABC transporter binding lipoprotein [Bacillus subtilis subsp. spizizenii str. W23] Length = 255 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 99/255 (38%), Gaps = 11/255 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + I ++ +++S KK + G + F + + + GFD Sbjct: 1 MKKWLLLLVAACITFALSACGSSSSGSESGKK--KIIMGTSADYKPFEYKEGD-NIVGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL+ + I+ ++ AL+SKQ+D++ T R+ + F Sbjct: 58 VDLAKALAKKTGYE---IEVQDMDFNSLITALKSKQVDLVLSGMTPTPERKK--QVDFSD 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y + K GI+S+ L G ++ VQ G+ E + + + R+ Sbjct: 113 VYYTANHMIVSKKDSGITSLKDLKGKTVGVQLGSIQEEKGKELSPEYGFQTEDR--NRIS 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ ++ R DA + ++ + ++PD ++ + + D+E + Sbjct: 171 DLVQEIKSDRFDAAIIEDMVAEGY-FKSNDDLQGFVIPDAKAEEAGSAIAFRKDSELTDK 229 Query: 241 VSWTHYAMVTAEELG 255 + M EL Sbjct: 230 FNKALKEMEDNGELE 244 >gi|239918031|ref|YP_002957589.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Micrococcus luteus NCTC 2665] gi|281415790|ref|ZP_06247532.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Micrococcus luteus NCTC 2665] gi|239839238|gb|ACS31035.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Micrococcus luteus NCTC 2665] Length = 297 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 79/221 (35%), Gaps = 7/221 (3%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L+ GI G + + GFD D R ++ + I+++ + R AL++ Sbjct: 53 LRIGIKFDQPGLGYREGSAQPTGFDTDVARYVADKLGVAEQDIEWVQTPSANRENALENG 112 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGT 154 ++D++ T R+ + F + GQ ++ I+ L G ++C G+ Sbjct: 113 EVDMIFATYSITDARKE--RVDFAGPYFVAGQDLLVRADDTAITGPESLDGKNLCSVTGS 170 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T+ + D F + + + E + + DA T D L L + + Sbjct: 171 TSAQKIKDQFAS---GVNLVEQGGYAECVTYLESGQVDAVTTDDIILAGLAAADANKGKF 227 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 ++ + + + +I + M + E Sbjct: 228 KVVGSTFTTERYGVGLPKDSEHCEDI-NEAIKEMKDSGEWK 267 >gi|204930952|ref|ZP_03221778.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204319996|gb|EDZ05201.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 266 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 83/254 (32%), Gaps = 20/254 (7%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M V + L+ + +L +K+RG L G+ F+ + Sbjct: 1 MKLALLGRQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGED 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+VDF AL+ + P +L +K+ID++ + +R+ Sbjct: 61 GKLTGFEVDFAEALAKHLGVKA---SLKPTKWDGILASLDAKRIDVVINQVTISDVRKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I + + L G + V GT E L + Sbjct: 117 -KYDFSTPYTISGVQALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGV 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + D S+ A+ Sbjct: 172 DIRTYDDDPTKYQDLRIGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALR 229 Query: 232 QGDTEWYNIVSWTH 245 +G+ + V Sbjct: 230 KGNEDLLKAVDNAI 243 >gi|262041043|ref|ZP_06014262.1| arginine ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041601|gb|EEW42653.1| arginine ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 243 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 76/252 (30%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + + G++ F + AN GFD Sbjct: 1 MKKLVLAALLTSFAFGAAAAE-------------KISFGVSATYPPFESMDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + ++ + AL+ K+ D + D T R + F Sbjct: 48 IDLAHALCKQM---QAECTFTNHAFDSLIPALKFKKYDAVISGMDITPERSKQVA--FTD 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++ KK S L G I ++ GTT + L D + ++ + Sbjct: 103 PY-YANSALVIAKKDTFHSFDDLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P P + L A+ + Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGAATPKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNAALKAI 227 >gi|229114025|ref|ZP_04243451.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus Rock1-3] gi|228669484|gb|EEL24900.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus Rock1-3] Length = 264 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M K + + + + G + ++ F + +G G Sbjct: 1 MKKKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLAG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + P+ I + LQSK+ D + + T R ++F Sbjct: 61 FDVEIGEALAKKMGMKPAPIT---NPWETLIQGLQSKKYDAILGSMAITEER--LKAVSF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + ++ ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKTLVS------KHTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VKKVNKALDEII 239 >gi|170769446|ref|ZP_02903899.1| cystine-binding periplasmic protein [Escherichia albertii TW07627] gi|170121770|gb|EDS90701.1| cystine-binding periplasmic protein [Escherichia albertii TW07627] Length = 266 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 85/241 (35%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 14 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 74 LAKHLGVEA---ALKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128 Query: 127 QGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K + I + L G + V GT E ++ + + ++ Sbjct: 129 IQTLVKKGYEGTIKTADDLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDMLAVTGEAFSRQESGVALRKGNEDLLKAVNGA 242 Query: 245 H 245 Sbjct: 243 I 243 >gi|292487797|ref|YP_003530672.1| arginine ABC transporter periplasmic protein [Erwinia amylovora CFBP1430] gi|291553219|emb|CBA20264.1| Arginine ABC transport system, periplasmic component [Erwinia amylovora CFBP1430] gi|312171916|emb|CBX80173.1| Arginine ABC transport system, periplasmic component [Erwinia amylovora ATCC BAA-2158] Length = 243 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 84/247 (34%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L L + ++ F + AN +GFD Sbjct: 1 MKKIVIAALLAGYSLSAGASQ-------------TIRFAAEASYPPFEFIDANNKIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I D + +L+ ++ D + D T RE + F Sbjct: 48 VDLANALCREIDAD---CTFTNQAFDSLIPSLKFRRFDAVMSGMDITPEREK--QVLFTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K ++SV L G + VQ GTT + +A+ + ++ + Sbjct: 103 AYYDNSALFITQKG-KVASVDALKGKRVGVQNGTTHQKYIAEKLPE----VKVVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N P + S L A+ QG++E Sbjct: 158 NAILDLKNGRLDAVFGDTAVVNEWLKKNPELAPLGEKVTDKSYFGSGLGIAVRQGNSELQ 217 Query: 239 NIVSWTH 245 ++ Sbjct: 218 GKLNAAL 224 >gi|183597011|ref|ZP_02958504.1| hypothetical protein PROSTU_00243 [Providencia stuartii ATCC 25827] gi|188023667|gb|EDU61707.1| hypothetical protein PROSTU_00243 [Providencia stuartii ATCC 25827] Length = 276 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 59/307 (19%), Positives = 103/307 (33%), Gaps = 65/307 (21%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQY 80 NA L DIK+ G ++ + F + G+DVD +A++ + ++ Sbjct: 21 ANADKLDDIKQAGVIRISVFDSNPPFGFIDPQTKKLAGYDVDIAQAIADDLGVK---LEL 77 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P N R L S ++D++ N T R + F + GQ FI K + + Sbjct: 78 RPTNPANRIPLLTSGKVDLIGANFTITDERAK--QVDFSIPDFATGQKFIARKG-VLKTP 134 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 ++ I GT E+TL + + I ++ + AA R A T D + Sbjct: 135 DDIAPLRIGADKGTVQEVTLRERYP----NTKVISYDDTPQAFAALRNGNVQAITQDDAK 190 Query: 201 LYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 L L ++ I P I++ A A +G+T V+ T Sbjct: 191 LVGLLGNLPEKVKADFEISPFSITREYQAVAAAKGETRLIENVNNT-------------- 236 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318 L ++K ++++R G + Sbjct: 237 -----------------LLKLEKEGKA---------------------EQIYNRWFGPDT 258 Query: 319 ELKIPRG 325 + PRG Sbjct: 259 KAAQPRG 265 >gi|134294561|ref|YP_001118296.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134137718|gb|ABO53461.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia vietnamiensis G4] Length = 266 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 14/232 (6%) Query: 17 FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHADDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLGVKT 78 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 Q++P LQ+ + D++ T R+ L F + I K Sbjct: 79 ---QFVPTEWSGIIAGLQAGKFDVIVNQVTITPQRKE--ALDFSEPYTYSAAQLIQRKDD 133 Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 S+ G + V GT D + E A R +A Sbjct: 134 TRNFKSLEDFKGKKLGVTLGTNY-----DQMARSVPGIEVQTYPGAPEKLRDLAAGRIEA 188 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D L + T++ P + + + +A +G+ ++ ++ Sbjct: 189 TLDDRLMLPYMIKTSNLPLRSGAVLNGGKQE-MAIPFRKGNPKFEKAINDAL 239 >gi|320177302|gb|EFW52306.1| Glutamine ABC transporter, periplasmic glutamine-binding protein [Shigella dysenteriae CDC 74-1112] Length = 248 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 86/247 (34%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M VS+ L ++F S L +T V F + + + GFD Sbjct: 1 MKSVLKVSLAALTLVFAVSSHAAD---------KKLVVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 51 VDLWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSD 105 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ + SV L G + V++GT + DY KA+ F + Sbjct: 106 GYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + +R DA D + T + + D + A +G E + Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKGSDELRD 220 Query: 240 IVSWTHY 246 V+ T Sbjct: 221 KVNGTLK 227 >gi|290473507|ref|YP_003466376.1| cysteine ABC transporter periplasmic binding protein [Xenorhabdus bovienii SS-2004] gi|289172809|emb|CBJ79580.1| cysteine transport protein (ABC superfamily, peri_bind) [Xenorhabdus bovienii SS-2004] Length = 257 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 74/249 (29%), Gaps = 13/249 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + L ++ S L IK G K G F GFD Sbjct: 1 MKAFLSLLLAGATALTISAPSYAGKDLDAIKASGVFKVGTEGTYPPFTYHDQANKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD R ++ + P ++ + L +K+ D + T RE +F Sbjct: 61 VDIAREVARRLNVKPE---FMEVKWDGLIAGLDAKRFDAVINQVGVTPEREA--KYSFSI 115 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I I + + + G Q+ T+ LA AH + + Sbjct: 116 PYTASQVVLITRDNNSDIKTFADIKGKRSA-QSLTSNYGQLATSNGAH-----LVSTDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + K ++ + A + +GD E Sbjct: 170 NQAIDLVATGRADATLNDRLSFLDFKKQRPDAPVKIVAQQADASKS-AVLLRKGDPELIA 228 Query: 240 IVSWTHYAM 248 +++ M Sbjct: 229 VINKALQDM 237 >gi|168239190|ref|ZP_02664248.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194736301|ref|YP_002114987.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194711803|gb|ACF91024.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288089|gb|EDY27476.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 266 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 83/254 (32%), Gaps = 20/254 (7%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M V + L+ + +L +K+RG L G+ F+ + Sbjct: 1 MKLALLGRQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGED 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+VDF AL+ + P +L +K+ID++ + +R+ Sbjct: 61 GKLTGFEVDFAEALAKHLGVKA---SLKPTKWDGILASLDAKRIDVVINQVTISDVRKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I + + L G + V GT E L + Sbjct: 117 -KYDFSTPYTISGVQALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGV 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + D S+ A+ Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALR 229 Query: 232 QGDTEWYNIVSWTH 245 +G+ + V Sbjct: 230 KGNEDLLKAVDNAI 243 >gi|62179395|ref|YP_215812.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224582641|ref|YP_002636439.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62127028|gb|AAX64731.1| ABC superfamily (bind_prot), glutamine high-affinity transporter [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224467168|gb|ACN44998.1| glutamine ABC transporter periplasmic-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322713866|gb|EFZ05437.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 248 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 83/245 (33%), Gaps = 20/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F +S A L +T V F + + + GFDVD Sbjct: 2 KSLLKVSLAALTLAFAVYSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K ID+ T R+ + F Sbjct: 53 LWDAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ I SV L G + V++GT + DY KA+ F ++ Sbjct: 108 YKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + + + A +G E V Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGESLEAQQYGVAFPKGSDELREKV 222 Query: 242 SWTHY 246 + Sbjct: 223 NGALK 227 >gi|330832846|ref|YP_004401671.1| putative amino acid transporter, amino acid-binding protein [Streptococcus suis ST3] gi|329307069|gb|AEB81485.1| putative amino acid transporter, amino acid-binding protein [Streptococcus suis ST3] Length = 270 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 91/264 (34%), Gaps = 18/264 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEV---KAN 53 M K ++ L + ++ S NA+ L D++++G L +N F Sbjct: 2 MKKYIMTGLVLLATIGLSACSGNATQEDTSLKDVQEKGKLIVALNPEFPPFEFRTLVDGK 61 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G D++ +A+ + + +++ ++ +QS Q DI T R Sbjct: 62 DTIVGADIELAKAIGQELGVE---VEFSAMSFDNVLNNVQSGQSDIAISGISATEERAKV 118 Query: 114 LGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F Y I++K+ +S+ L+ A+I Q G+ E + + + Sbjct: 119 --YDFSIPYYTSTNKVIINKEDLAQYTSLDSLAEANIGAQKGSIQEQIIKEQLPS----S 172 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 I E+ ++ + +A + A ND A A+ Sbjct: 173 TVIALASNGELINQLKSQKVEAVIFEEPIAKAYVAKNDDLVILDTEIKSSYSDAYAIALP 232 Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255 +G T V +V + ++ Sbjct: 233 KGSTALKEKVDSVITKLVESGQMD 256 >gi|238912473|ref|ZP_04656310.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 266 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 83/254 (32%), Gaps = 20/254 (7%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M V + L+ + +L +K+RG L G+ F+ + Sbjct: 1 MKLALLGRQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDD 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+VDF AL+ + P +L +K+ID++ + +R+ Sbjct: 61 GKLTGFEVDFAEALAKHLGVKA---SLKPTKWDGILASLDAKRIDVVINQVTISDVRKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I + + L G + V GT E L + Sbjct: 117 -KYDFSTPYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGV 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + D S+ A+ Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALR 229 Query: 232 QGDTEWYNIVSWTH 245 +G+ + V Sbjct: 230 KGNEDLLKAVDNAI 243 >gi|161503951|ref|YP_001571063.1| hypothetical protein SARI_02043 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865298|gb|ABX21921.1| hypothetical protein SARI_02043 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 243 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 81/250 (32%), Gaps = 25/250 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + + G++ F + A+ GFD Sbjct: 1 MKKLVLAALLASFATGSIAAE-------------KINFGVSATYPPFESLDASNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + ++ + AL+ ++ D + D T R + F Sbjct: 48 IDLATALCKQM---QAECTFTNHAFDSLIPALKFRKYDAVISGMDITPERSKQVA--FSN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++ KK + + L G I ++ GTT + L D + ++ + Sbjct: 103 PY-YANSALVIAKKDTYKTFADLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + TN + P+ + + L A+ + Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPQLGPATEKVTDPQYFGTGLGIAVRPDNKALL 217 Query: 239 NIVSWTHYAM 248 ++ A+ Sbjct: 218 EKLNNALTAI 227 >gi|317053657|ref|YP_004118791.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] gi|316952762|gb|ADU72235.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 261 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 59/255 (23%), Positives = 97/255 (38%), Gaps = 14/255 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M L L+ L F A+ L DIK RG L+ + A G G D Sbjct: 1 MK--TIGKTLALVALCALPFLAQANSLDDIKSRGVLRVATTVDAAPWGFTDAAGKPTGLD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + L+ + +Q + R L S+++D+L E + + F Sbjct: 59 VDLAQKLADNMGVK---LQLQQVTGANRIPYLMSRKVDVLIAALG--SSPERAKLVNFSE 113 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G K ++ +S LS A+I V G+T +LTL+D N + E Sbjct: 114 PYAAVYLGVYGGSDVKKVTKLSDLSNATIAVPKGSTPDLTLSDQNPQGNY----LRLEDT 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +A+ + + + + A K+ + P++H+ L ++ KSP AI G E Sbjct: 170 ASAVSAFLSGQAPMFAENNLI--AQKVAQENPAKHIELKYLLRKSPAYIAIRPGQPELMA 227 Query: 240 IVSWTHYAMVTAEEL 254 ++ EL Sbjct: 228 AINQFIDKSTQDGEL 242 >gi|154149175|ref|YP_001406108.1| amino acid [Campylobacter hominis ATCC BAA-381] gi|153805184|gb|ABS52191.1| amino acid [Campylobacter hominis ATCC BAA-381] Length = 270 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 98/246 (39%), Gaps = 17/246 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L A+ L +IK L+ G+ F+++K NG+++GF+ Sbjct: 1 MKKILVFLMFMLGFLS-------ANSLNEIKSSKILRVGVFEAQPPFSQIKENGEFEGFE 53 Query: 61 VDFCRALSSAIF-DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 VD + ++ IF + I++ P+ A +R LQ+ +ID L T R + F Sbjct: 54 VDLAKEIAKKIFGGNSGTIEFKPVLASDRLKVLQNNEIDFLIATFTITDERSKV--IDFS 111 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K GI + + L G +I + GTT E+ N ++ + + Sbjct: 112 NPYFAVNIGVVTRKDDGIKTFADLKGKTIIAEHGTTGEVYFR------NQGFNILGCDGA 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A + + D+ E + + + L + +G+ E N Sbjct: 166 ANCYKMLKNTPDAAGYASDNTIVLTYAVIDKSLEVN-INSLGASDFLGIGVQKGNKELLN 224 Query: 240 IVSWTH 245 I++ Sbjct: 225 IINDEL 230 >gi|238790814|ref|ZP_04634571.1| Extracellular solute-binding protein family 3 [Yersinia frederiksenii ATCC 33641] gi|238721091|gb|EEQ12774.1| Extracellular solute-binding protein family 3 [Yersinia frederiksenii ATCC 33641] Length = 260 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 87/253 (34%), Gaps = 22/253 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L+ S A + I G++ G F + +G+ GFD Sbjct: 4 MKK----TLAALLTGLILSAPVAAQTIDTI------SFGVDGGYPPFDVLAPSGEITGFD 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + +K ++ + AL +++ D + + T R+ + F Sbjct: 54 IDIANALCDNL---HAKCVFVKQPFESMIAALNARKFDAIIASLSITEERKK--EVDFTD 108 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K + V+ L G ++ VQ G+ E ++ + + Sbjct: 109 RYYRSAAQLVARKGSTLSPDVATLKGKTVGVQTGSIHEAFAKKHWA--GQGIKIVSYANQ 166 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDT 235 + + + R +A D + + R + +I + A+ + + Sbjct: 167 DNVYLDLMSGRINASLQDNIQAASSFIDTPRGQKFAFAGPVIQDETISTDVGIAVGKDNP 226 Query: 236 EWYNIVSWTHYAM 248 + ++ A+ Sbjct: 227 ALRDALNGAIKAI 239 >gi|311103255|ref|YP_003976108.1| extracellular solute-binding protein, family 3 family protein 2 [Achromobacter xylosoxidans A8] gi|310757944|gb|ADP13393.1| bacterial extracellular solute-binding protein, family 3 family protein 2 [Achromobacter xylosoxidans A8] Length = 303 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 88/241 (36%), Gaps = 8/241 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFD 73 ++ + S L IK+ G + G V FA + N G+ V+ C+ ++ +A+ Sbjct: 19 SAHAEGPSRLDKIKETGVITLGHPETSVPFAYLDGNQKPIGYTVEICQEVAQYVKAALKL 78 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++Y P + R L + ID+ NT L R ++F P T+ + K Sbjct: 79 PKLEVRYNPTTSATRIPLLANGTIDLECGNTTNNLERHKL--VSFAPTTFVAQVVLVARK 136 Query: 134 KKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 G+ +++ G SI QAG T ++ N+ + E + R Sbjct: 137 DGGVDPNNLESFRGKSIAAQAGGQTFRLISQLNAKGNLGITMAPTKDTAETILMVESGRA 196 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 D Y ++ P VI + +P + D + +V ++ Sbjct: 197 AGSANDDGIAYGAVASSKNPDAFVIGTKGLEMAPYGIMEPKDDPAFKKVVDDAVRDLIKT 256 Query: 252 E 252 Sbjct: 257 G 257 >gi|320355176|ref|YP_004196515.1| PAAT family amino acid ABC transporter substrate-binding protein [Desulfobulbus propionicus DSM 2032] gi|320123678|gb|ADW19224.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfobulbus propionicus DSM 2032] Length = 273 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 41/247 (16%), Positives = 88/247 (35%), Gaps = 21/247 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + + ++L + + +S + ++G LK G+ F G G V Sbjct: 14 IRKWLGTLLLVAVFAVSSCAAE--------QQGPLKVGMELAYPPFEMTNTTGKPAGVSV 65 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +AL ++ + I+ ++ AL++ +IDI+ + T R + + F Sbjct: 66 DLAKALGISLGRE---IKIENMSFDGLIPALKTGKIDIILSSMTATAER--AQSIDFSEP 120 Query: 122 TYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G ++ K + +++ L G ++ V+ GTT + K +V ++ Sbjct: 121 YLQTGLCLLVRKDSAVQTIADLDQDGMTVAVKKGTTGHNYASKALKKAK----LLVLDKE 176 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + DA+ D + Y+ P L + A I + +T Sbjct: 177 AAAVLEVVQGKADAFIYDQMSTYSN--WKRNPQTTRALLKPFQQESWAIGIRKDNTALKE 234 Query: 240 IVSWTHY 246 ++ Sbjct: 235 EINRFLK 241 >gi|331667180|ref|ZP_08368045.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli TA271] gi|331065536|gb|EGI37429.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli TA271] Length = 248 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 84/245 (34%), Gaps = 20/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K +D++ T R+ + F Sbjct: 53 LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLVLAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + D + A +G E + V Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKGSDELRDKV 222 Query: 242 SWTHY 246 + Sbjct: 223 NGALK 227 >gi|306824969|ref|ZP_07458312.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432796|gb|EFM35769.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 271 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 81/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K V L + + ++ + IK++G L + F V Sbjct: 4 KKWILVVCSMLASVILVACQSSTDSSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAIAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K +S L+ A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKMSFLVRKSDLDKYKDLSSLASANIAAQKGTVPETMVKEQLP----NAQ 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + + A AI + Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAGKNSDLAVATVNLTMKDGEANAVAIKK 234 Query: 233 GDTEWYNIVSWTHY 246 ++ +V Sbjct: 235 DQSDLKAVVDKVIQ 248 >gi|295109554|emb|CBL23507.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Ruminococcus obeum A2-162] Length = 292 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 86/253 (33%), Gaps = 20/253 (7%) Query: 1 MYKDFFVSILCLIILF--FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++ ++ ++ S A I L G + + + +G++ G Sbjct: 1 MKKKAVAVLVTAVMAMGMVSAVSVQAGIEDK-----TLIVGFDAEYPPYGYMDDDGEYTG 55 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD++ +A+ + +++ P+N + + L S ID + + F Sbjct: 56 FDLELAQAVCD---LEEWELEKKPINWDSKDMELNSGSIDCIWNGFTMNGRED---DYTF 109 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA-----HNMKYHP 173 + Q ++ + GI ++ L+G + VQA + L + + Sbjct: 110 SDPYVDNSQVIVVAEDSGIDKLTDLAGKIVGVQAASAALDLLQSEEEGGQKELADTFGSL 169 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 F +A DA D A N R IL + ++ A +G Sbjct: 170 NEFADYNTAFTELQAGALDALAID--IGVAKYQLNSRGEGFKILDETLNTEQYAIGFKKG 227 Query: 234 DTEWYNIVSWTHY 246 + E IV+ Sbjct: 228 NDELCGIVNADLQ 240 >gi|309702622|emb|CBJ01951.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli ETEC H10407] Length = 260 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 96/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L++ T+ S+ A++ ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSIL--ALSLLVGLSTAASSYAALPE------TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E + +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L + + + + D Sbjct: 166 DLVYSDLTAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257 >gi|300811731|ref|ZP_07092205.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497307|gb|EFK32355.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 286 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 79/229 (34%), Gaps = 8/229 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77 S S K+ + G+ F G +GF++D A++ I SK Sbjct: 30 CSSKQESSYARAKQSKQITWGVRPDTKLFGLTNIKTGKIEGFEIDLATAITKQILGPKSK 89 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + P+ K R L + +D + T R + F + + + I+ K I Sbjct: 90 AVFRPITEKTRITLLHNGSLDAVISTMTITKER--MKVIDFSDVYFNANESMIVKKSSKI 147 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S++ L+ + V A T+ +A+ K F+ A +A + D D Sbjct: 148 RSIADLNKKGVVVIAIKGTD--VANQVAKLASKASVKQFDDYGSAFNALKAGQGDVMIDD 205 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 L L E + +++ P + +G TE ++ Sbjct: 206 NGILAGLIADTP---EFTLTKASLAEEPYGIGVEKGQTEMRQAINQALK 251 >gi|291085212|ref|ZP_06352421.2| cystine ABC transporter, periplasmic cystine binding protein [Citrobacter youngae ATCC 29220] gi|291072355|gb|EFE10464.1| cystine ABC transporter, periplasmic cystine binding protein [Citrobacter youngae ATCC 29220] Length = 273 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 84/254 (33%), Gaps = 20/254 (7%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M V + L+ + +L +K+RG L G+ F+ + Sbjct: 8 MKLALLGRQALMGVMAVALVAGMSVKTYADEGLLNKVKERGTLLVGLEGTYPPFSFQGDD 67 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+V+F AL+ + P +L SK+ID++ + R+ Sbjct: 68 GKLTGFEVEFAEALAKHLGVKA---TLKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I + + L G + V GT E ++ + + Sbjct: 124 -KYDFSTPYTVSGIQALVKKGNEGVIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGV 178 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + + S+ A+ Sbjct: 179 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKDTLAVTGEAFSRQESGVALR 236 Query: 232 QGDTEWYNIVSWTH 245 +G+ + V Sbjct: 237 KGNEDLLKAVDAAI 250 >gi|257470742|ref|ZP_05634832.1| TcmP [Fusobacterium ulcerans ATCC 49185] gi|317064947|ref|ZP_07929432.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185] gi|313690623|gb|EFS27458.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185] Length = 241 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 86/249 (34%), Gaps = 22/249 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + +L L+I+ + + K G N F + +G G D Sbjct: 1 MKKLFKLFMLSLLIVLTAACGAS-------KTEKVYVIGTNAEYPPFEYL-EDGKVCGLD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D A++ + + ++ N ALQ+K++D + T R + F Sbjct: 53 ADIIAAIAQKL---NIQYKWSNTNFDGLIPALQTKKMDAVIAGMSITPERAK--AVNFSI 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 FI +K K I+ + L + + GTT E A F Sbjct: 108 PYLSSNVAFIANKSKPINGIEDLENKNYGAELGTTKEAAARKIKGA-----TVTPFSSNT 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A ++ + D D S A+K + P ++L + P A A + DTE Sbjct: 163 GALVALKSGKIDGIVLDES--VAVKFVENNPE--LMLVGALEGEPKAIAFNKDDTELMEK 218 Query: 241 VSWTHYAMV 249 + ++ Sbjct: 219 FNKALQELI 227 >gi|229031800|ref|ZP_04187789.1| Arginine-binding extracellular protein artP [Bacillus cereus AH1271] gi|228729546|gb|EEL80534.1| Arginine-binding extracellular protein artP [Bacillus cereus AH1271] Length = 259 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 52/283 (18%), Positives = 100/283 (35%), Gaps = 26/283 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N K + L G + + V+A+ + G Sbjct: 1 MKKLLSISFALILIVSMFSACSNGKEKASGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ K + K +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIQSVEDLKGKKVGVQTGSIQEEKAAEFKKEVDFKVEGR--DR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + I + E Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLGKMK--------------ELQGIEIKEAPEEVG 219 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDK 281 ++ + TAE + +K + V+++ G +K Sbjct: 220 AAIALPKNSDKTAEFNKVIKK---MQENGEMDKLVKKWFGSEK 259 >gi|319943564|ref|ZP_08017846.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lautropia mirabilis ATCC 51599] gi|319743379|gb|EFV95784.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lautropia mirabilis ATCC 51599] Length = 281 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 76/214 (35%), Gaps = 7/214 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G++ + GFD+D R +S + ++++ P++ + L Sbjct: 55 KVVIGLDDNFPPMGFRNEKNELVGFDIDMAREAASRMG---VQVEFKPIDWNAKEAELIG 111 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K++D L T R+ +AF P + Q I+ + I + + L+G + Q G+ Sbjct: 112 KRVDALWNGLTITEKRK--QNIAFTPPYMQNHQIIIVKRGSPIGNKTGLAGKIVGAQDGS 169 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + + K + + A R DA D + +P + Sbjct: 170 SAVDAIEADAKVSKSLKQLKKYGDNVTVLLDLDAGRLDAAVLDE--VVGRYYVAKKPFAY 227 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 V+L + + + DT +S +M Sbjct: 228 VVLEEDFGTEDYGVGLRKEDTALQEKLSAALESM 261 >gi|307308380|ref|ZP_07588085.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] gi|306901181|gb|EFN31788.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] Length = 281 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 94/290 (32%), Gaps = 25/290 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + L+ + A +IK +G G+ + + NG GFD++ Sbjct: 12 RALSAITAVLLAATAFATGAEAVTPEEIKAKGTAVIGVQMDQFPWGFIDQNGQNDGFDIE 71 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + ++ + + +++ + + R L + +D L + T R + + Sbjct: 72 IAKLIAQELGVE---VKFERITGQNRIPLLVNGNVDFLVPSMTVTEERAKVIQ--YVIPY 126 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + K I L I V G+ E L KA F+ Sbjct: 127 SSNDITVWAKKDAEIKGNEDLGKYVIGVNRGSVFEPVL---VKAAPPSTEIKRFDDDATT 183 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + + DA G S Y L + R S ++ + A+ +GD E N ++ Sbjct: 184 VQALLSGQVDAILG--SVTYGLVIKETRHSAEYERKYKVADNFQGMAVRKGDQEMLNFLT 241 Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292 + + + ++++G+D++ G+ Sbjct: 242 DFVT---------------RHTADGSLDALYKKWIGVDRAELPTTLPGID 276 >gi|300118988|ref|ZP_07056699.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus SJ1] gi|298723604|gb|EFI64335.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus SJ1] Length = 264 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESATTTSNGKKEFRYAMSGLYKPFNYKENDGKLVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + P+ I + L++K+ D++ + T R + F Sbjct: 61 FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KHTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + + E Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDNKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|312112153|ref|YP_003990469.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y4.1MC1] gi|311217254|gb|ADP75858.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y4.1MC1] Length = 270 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 72/228 (31%), Gaps = 13/228 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S +L +KK G L+ G F +G+ GFDVD R ++ + P Sbjct: 32 SGKKETDLLAQVKKEGELRIGTEGTYPPFTFHDQSGELTGFDVDLAREVAKRLGVKP--- 88 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ F L +K+ D+++ R+ F ++HK Sbjct: 89 VFMETQWDAMFAGLDAKRFDMIANEVGI--RRDRQQKYDFSDPYITSMAVLVVHKDNNKV 146 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S + Q+ T+ LA + A + E + + R D D Sbjct: 147 SKFENIKGLKAAQSMTSNFADLARSYGA-----QIVGVEGFNQAVELLSSKRVDVTINDN 201 Query: 199 -SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 S L L+ + P I+ S +G V+ Sbjct: 202 LSVLDFLRQKPNAPI--KIVAKHKDASQSGFMFRKGSDTLVEAVNKAL 247 >gi|218899317|ref|YP_002447728.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus G9842] gi|228902667|ref|ZP_04066817.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis IBL 4222] gi|228967197|ref|ZP_04128233.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis serovar sotto str. T04001] gi|218543126|gb|ACK95520.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus G9842] gi|228792566|gb|EEM40132.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis serovar sotto str. T04001] gi|228856982|gb|EEN01492.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis IBL 4222] Length = 259 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 78/212 (36%), Gaps = 9/212 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N + L G + + V+A+ + G Sbjct: 1 MKKLLSISFALILIVSIFSACSNGESKETKGNKKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + EI +A R DA + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD 205 >gi|257069405|ref|YP_003155660.1| amino acid-binding protein [Brachybacterium faecium DSM 4810] gi|256560223|gb|ACU86070.1| amino acid-binding protein [Brachybacterium faecium DSM 4810] Length = 290 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 75/199 (37%), Gaps = 6/199 (3%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ GI G + GD GFDV+ + ++ + +I+++ + R AL+ Sbjct: 45 VRIGIKYDQPGLGFREGGGDPTGFDVEVAKYVADELGYSEDQIEWVQTPSANRENALEGG 104 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGT 154 ++D++ T R+ + F + GQ ++ I+ L G ++C G+ Sbjct: 105 EVDMIIATYSITDERKE--RVDFAGPYFVAGQDLLVRADDSEITGPEALDGKNLCSVTGS 162 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T+ + D + + E + + DA T D L L T + + Sbjct: 163 TSAQKIKDEYAE---GVQLVEQGGYAECVTYLESGQVDAVTTDDIILAGLAATPENSGKF 219 Query: 215 VILPDIISKSPLAPAIIQG 233 ++ + S I G Sbjct: 220 KVVGNPFSVERYGVGIPSG 238 >gi|124265324|ref|YP_001019328.1| glutamine transport system substrate-binding protein [Methylibium petroleiphilum PM1] gi|124258099|gb|ABM93093.1| glutamine transport system substrate-binding protein [Methylibium petroleiphilum PM1] Length = 285 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 70/222 (31%), Gaps = 7/222 (3%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G + F G+ GF +D +A+++ + ++++ + F ALQ Sbjct: 53 KVYVVGTDAAYAPFEFQNEKGEIVGFSIDLLQAVAAKGGFE---VKFVNTPWEGIFNALQ 109 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 D+L + T R+ + F + Q + ++ L + VQ G Sbjct: 110 QGDRDLLISSITITDERK--QTMDFSNPYFDAFQLIAVKATSKVAKFDDLKKLKVGVQTG 167 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT + + + + FE A DA D + N + Sbjct: 168 TTGDEVVTKLQGKN--SANVKRFESTPLALKELEAGGVDAVVADNGVIINYVTNNAGANF 225 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + A+ +G+ E V+ A+ Sbjct: 226 KTVSDSAFAPEQYGIAVKKGNAELLEKVNKGIAAIKADGSYD 267 >gi|292899027|ref|YP_003538396.1| arginine ABC transporter substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291198875|emb|CBJ45985.1| arginine ABC transporter, substrate-binding protein [Erwinia amylovora ATCC 49946] Length = 248 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 84/247 (34%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L L + ++ F + AN +GFD Sbjct: 6 MKKIVIAALLAGYSLSAGASQ-------------TIRFAAEASYPPFEFIDANNKIQGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I D + +L+ ++ D + D T RE + F Sbjct: 53 VDLANALCREIDAD---CTFTNQAFDSLIPSLKFRRFDAVMSGMDITPEREK--QVLFTQ 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K ++SV L G + VQ GTT + +A+ + ++ + Sbjct: 108 AYYDNSALFITQKG-KVASVDALKGKRVGVQNGTTHQKYIAEKLPE----VKVVPYDSYQ 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N P + S L A+ QG++E Sbjct: 163 NAILDLKNGRLDAVFGDTAVVNEWLKKNPELAPLGEKVTDKSYFGSGLGIAVRQGNSELQ 222 Query: 239 NIVSWTH 245 ++ Sbjct: 223 GKLNAAL 229 >gi|210623567|ref|ZP_03293893.1| hypothetical protein CLOHIR_01843 [Clostridium hiranonis DSM 13275] gi|210153437|gb|EEA84443.1| hypothetical protein CLOHIR_01843 [Clostridium hiranonis DSM 13275] Length = 274 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 43/283 (15%), Positives = 98/283 (34%), Gaps = 27/283 (9%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K + + ++ L + S A L +K+ G L ++ F Sbjct: 3 MKKLVSLGMAMVLSLGLVACGNGGGEESSEAADKLDAVKESGKLVVAMSADYPPFEFHST 62 Query: 53 NG---DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 G G D D +A++ I D +++ + AL++ ++D++ T Sbjct: 63 KGGEDKVVGVDADLAKAIAKEIGVD---VEFKEMTFDGLVGALKADKVDMVISGMSPTEE 119 Query: 110 REISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ + F + Y ++ ++ I+S Q+ + Q G+ E A+ Sbjct: 120 RKK--NVDFSEVYYTGKNVLVVREGEEDKITSEDQVKSMKVATQKGSIQETY------AN 171 Query: 168 NMKYH-PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSP 225 + E V ++ + DA + + D LP+ ++ Sbjct: 172 KIGCTGLKSLESVPDLMMELKNGNVDAVIVNDTVGLINVNQIDGIALSSFNLPEGDAEES 231 Query: 226 LAPAIIQ-GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 +A A+ + +T + ++ V + + N +++ Sbjct: 232 MAIAVKKGNNTAYLEAINKAVKDFVANDLQKSLEDNSALAAQE 274 >gi|317404629|gb|EFV85029.1| amino-acid ABC transporter [Achromobacter xylosoxidans C54] Length = 261 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 76/256 (29%), Gaps = 18/256 (7%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F++ L + + + + L IK G K G F A+G G Sbjct: 1 MKLLRSLFIAGLVQVAALSAAHAQSG--LDQIKSAGVFKIGTEGTYAPFTFHDASGQLTG 58 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD RA++ + ++ L +K+ D + T R F Sbjct: 59 FDVDIGRAIAQRLGVKAE---FVEGKWDGLIAGLDAKRYDAVINQVGITDARRA--KYDF 113 Query: 119 RPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 I+ I S + L G T+ LA A + + Sbjct: 114 SDPYISSAAVLIVRDDNTTIKSFADLKGRKSA-NTLTSNFGKLAQSHGA-----EVVAVQ 167 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTE 236 E + R +A D + K + D S + + + E Sbjct: 168 GFNEAIDLLTSGRVEATVNDNLSFLDFKKQKPNAKVKIAATDKAAEFSNSGVLLRKNNPE 227 Query: 237 WYNIVSWTHYAMVTAE 252 ++ A + A+ Sbjct: 228 LVAAINKAL-ADIKAD 242 >gi|229071661|ref|ZP_04204878.1| Arginine-binding extracellular protein artP [Bacillus cereus F65185] gi|228711456|gb|EEL63414.1| Arginine-binding extracellular protein artP [Bacillus cereus F65185] Length = 259 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 88/254 (34%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N + L G + + V A+ + G Sbjct: 1 MKKLVSISFALILIVSIFSACSNEESKETKGNKKVLVMGTSADYKPYEYVDASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E +++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKASEF--KKQVDFQVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTV 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|168234124|ref|ZP_02659182.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168822994|ref|ZP_02834994.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194470856|ref|ZP_03076840.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197264655|ref|ZP_03164729.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200389342|ref|ZP_03215953.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|194457220|gb|EDX46059.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197242910|gb|EDY25530.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|199601787|gb|EDZ00333.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205331855|gb|EDZ18619.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205340677|gb|EDZ27441.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320085428|emb|CBY95209.1| Cystine-binding periplasmic protein CBP; Protein fliY; Sulfate starvation-induced protein 7; SSI7; Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322616947|gb|EFY13855.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618187|gb|EFY15079.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625857|gb|EFY22676.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626309|gb|EFY23119.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632724|gb|EFY29469.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639066|gb|EFY35759.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640507|gb|EFY37160.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322649895|gb|EFY46316.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655503|gb|EFY51811.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660281|gb|EFY56519.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662962|gb|EFY59169.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668147|gb|EFY64306.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674093|gb|EFY70187.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675554|gb|EFY71628.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683034|gb|EFY79050.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686728|gb|EFY82706.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195383|gb|EFZ80563.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199274|gb|EFZ84369.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204439|gb|EFZ89445.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207529|gb|EFZ92477.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211854|gb|EFZ96685.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217514|gb|EGA02233.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219589|gb|EGA04073.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223592|gb|EGA07907.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231536|gb|EGA15649.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235979|gb|EGA20058.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240549|gb|EGA24592.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245441|gb|EGA29441.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250211|gb|EGA34103.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253978|gb|EGA37802.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255495|gb|EGA39256.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262092|gb|EGA45655.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266215|gb|EGA49705.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270676|gb|EGA54117.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 266 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 83/254 (32%), Gaps = 20/254 (7%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M V + L+ + +L +K+RG L G+ F+ + Sbjct: 1 MKLALLGRQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGED 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+VDF AL+ + P +L +K+ID++ + +R+ Sbjct: 61 GKLTGFEVDFAEALAKHLGVKA---SLKPTKWDGILASLDAKRIDVVINQVTISDVRKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I + + L G + V GT E L + Sbjct: 117 -KYDFSTPYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGV 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + D S+ A+ Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALR 229 Query: 232 QGDTEWYNIVSWTH 245 +G+ + V Sbjct: 230 KGNEDLLKAVDNAI 243 >gi|157161392|ref|YP_001458710.1| cystine transporter subunit [Escherichia coli HS] gi|157067072|gb|ABV06327.1| cystine-binding periplasmic protein [Escherichia coli HS] Length = 266 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 85/243 (34%), Gaps = 13/243 (5%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 V + L+ + +L +K+RG L G+ F+ +G GF+V+F Sbjct: 12 MSVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFA 71 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + L+ + + P +L SK+ID++ + R+ F Sbjct: 72 QQLAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTI 126 Query: 125 DGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G ++ K + + + L G + V GT E ++ + + ++ Sbjct: 127 SGIQALVKKGNEGTLKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTK 182 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 183 YQDLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVN 240 Query: 243 WTH 245 Sbjct: 241 DAI 243 >gi|306843855|ref|ZP_07476450.1| extracellular solute-binding protein [Brucella sp. BO1] gi|306275610|gb|EFM57334.1| extracellular solute-binding protein [Brucella sp. BO1] Length = 268 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 84/254 (33%), Gaps = 15/254 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +++ + + A+ + + ++ L G F +K +G GFD Sbjct: 1 MRVLKRIAMATSVAALAITIGNMAAGVANAEEPLKLTIGTEGAYPPFNFIKPDGTLSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RAL + +K +++ ALQS + D + T R+ + F Sbjct: 61 VDIARALCDEM---KAKCEFVTQEWDGAIPALQSGKFDAFIASMSITDERKK--QVDFTN 115 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G K I + L+G +I VQ TT A+Y + + Sbjct: 116 KYYNTPPGIAAPKDTDIKGVTKEDLAGKTIGVQGSTTH----ANYSEKTYTDSTIKSYPT 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP----AIIQGD 234 EE R DA D L + D ++ P AI +G Sbjct: 172 AEEYRLDLANGRLDAVNDDSVTLAEWLKSPDGACCKMVGTFPPVTEIHGPGAGIAIKKGR 231 Query: 235 TEWYNIVSWTHYAM 248 E + A+ Sbjct: 232 PELVAKFNAAIKAI 245 >gi|256061053|ref|ZP_05451209.1| extracellular solute-binding protein [Brucella neotomae 5K33] gi|261325055|ref|ZP_05964252.1| extracellular solute-binding protein [Brucella neotomae 5K33] gi|261301035|gb|EEY04532.1| extracellular solute-binding protein [Brucella neotomae 5K33] Length = 268 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 87/254 (34%), Gaps = 15/254 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +++ + + + A+ + + ++ L G F +K +G GFD Sbjct: 1 MRVLKRIAMATSVAALAITVGSMAAGVANAEEPLKLTIGTEGAYPPFNFIKPDGTLSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RAL + +K +++ + ALQS + D + + T R+ + F Sbjct: 61 VDIARALCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFNASMSITDERKK--QVDFTN 115 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G K I + L+G +I VQ TT A+Y + + Sbjct: 116 KYYNTPPGIAAPKDTDIKGVTKEDLAGKTIGVQGSTTH----ANYSEKTYTDSTIKSYPT 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP----AIIQGD 234 EE R DA D L + D ++ P AI +G Sbjct: 172 AEEYRLDLANGRLDAVNDDSVTLAEWLKSPDGACCKMVGTFPPVTEIHGPGAGIAIKKGR 231 Query: 235 TEWYNIVSWTHYAM 248 E + A+ Sbjct: 232 PELVAKFNAAIKAI 245 >gi|168462508|ref|ZP_02696439.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195634303|gb|EDX52655.1| cystine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 266 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 83/254 (32%), Gaps = 20/254 (7%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M V + L+ + +L +K+RG L G+ F+ + Sbjct: 1 MKLALLGRQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGED 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+VDF AL+ + P +L +K+ID++ + +R+ Sbjct: 61 GKLTGFEVDFAEALAKHLGVKAL---LKPTKWDGILASLDAKRIDVVINQVTISDVRKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I + + L G + V GT E L + Sbjct: 117 -KYDFSTPYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGV 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + D S+ A+ Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALR 229 Query: 232 QGDTEWYNIVSWTH 245 +G+ + V Sbjct: 230 KGNEDLLKAVDNAI 243 >gi|13474707|ref|NP_106276.1| ABC transporter, periplasmic amino acid-binding protein [Mesorhizobium loti MAFF303099] gi|14025462|dbj|BAB52062.1| ABC transporter, periplasmic amino acid-binding protein [Mesorhizobium loti MAFF303099] Length = 257 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 78/222 (35%), Gaps = 9/222 (4%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 + LK G F + ++G GFD+D AL + + + + + + Sbjct: 26 QAAEKLKIGTEGAYPPFNTITSDGKVVGFDIDIANALCAQMKVE---CEIVTQDWDGIIP 82 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS--VSQLSGASI 148 ALQ+K+ D + + T R+ + F Y + K ++S + L+G ++ Sbjct: 83 ALQAKKFDAIIASMSITEERKKQVA--FTNKYYTTPLALVAPKDSDLTSADPAALAGKTV 140 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 QA TT + + + + EE R DA D L Sbjct: 141 GAQASTTQADYAQNTYGKAGAEAKL--YPTQEEAITDLTNGRLDAVISDKFVLVDWLKKA 198 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 ++ +++ A+ DT + ++ A+V Sbjct: 199 SDGCCKLVGDVKGTETQAGIAVRLDDTALRDKLNAAIDAIVA 240 >gi|320334510|ref|YP_004171221.1| ABC transporter periplasmic subunit [Deinococcus maricopensis DSM 21211] gi|319755799|gb|ADV67556.1| ABC-type transporter, periplasmic subunit family 3 [Deinococcus maricopensis DSM 21211] Length = 251 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 86/246 (34%), Gaps = 18/246 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +++ +L T+ A IK G +K F + GF+ Sbjct: 1 MKR----TLVLFAVLAATASPAQARTWDQIKSSGTIKIATEGAFKPFNYFEGK-TLTGFE 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A++ + K+Q++ + L + D + + T R+ + F Sbjct: 56 VELGNAIAKQLG---MKVQWVTQPFDGLLIGLNQDRYDFVIASHGITPERQK--AVDFSA 110 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ++ G I+ K G + LSG + VQ GTT + + + Sbjct: 111 P-HYCTGGLIVSKTGGPKTAKDLSGKIVAVQVGTTYLDNVKKVAGVK----SVKTYPKDT 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A R DA+ D A+ P + D++ + + A+ +G+ Sbjct: 166 DAQQAIMMGRADAWVSDKFL--AIDAIKANPGKLQQ-GDLLFQERIGMAVKKGNASLLKE 222 Query: 241 VSWTHY 246 ++ T Sbjct: 223 LNTTLQ 228 >gi|118479347|ref|YP_896498.1| amino acid ABC transporter amino acid-binding protein [Bacillus thuringiensis str. Al Hakam] gi|196047230|ref|ZP_03114446.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB108] gi|225866136|ref|YP_002751514.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB102] gi|229186398|ref|ZP_04313562.1| Arginine-binding extracellular protein artP [Bacillus cereus BGSC 6E1] gi|118418572|gb|ABK86991.1| L-arginine-binding protein [Bacillus thuringiensis str. Al Hakam] gi|196021979|gb|EDX60670.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB108] gi|225788838|gb|ACO29055.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB102] gi|228597025|gb|EEK54681.1| Arginine-binding extracellular protein artP [Bacillus cereus BGSC 6E1] gi|324328061|gb|ADY23321.1| amino acid ABC transporter, amino acid-binding protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 259 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 90/254 (35%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N K + L G + + V+A+ + G Sbjct: 1 MKKLLSISFALILIVSMFSACSNGEEKVTGKNKKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFKVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|118470248|ref|YP_887061.1| glutamate binding protein [Mycobacterium smegmatis str. MC2 155] gi|118171535|gb|ABK72431.1| glutamate binding protein [Mycobacterium smegmatis str. MC2 155] Length = 273 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 92/278 (33%), Gaps = 18/278 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++ I L F + + G + G G + +G GFDVD Sbjct: 6 KRVAGAVALAIALPFAATACGGGDSGGDSD--TIVIGTKYDQPGLGLKQPDGTLTGFDVD 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + +++ + +I++ + +R +Q+ Q+D ++ T R+ + F Sbjct: 64 VAKYVANELGYSEDQIEWKEAPSAQRETLIQNGQVDFIAATYSITDSRKE--KVDFAGPY 121 Query: 123 YFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 GQ ++ + + + +C +G+T + D + ++ Sbjct: 122 LITGQSLLVRADNNDITGAASLENNKKLCSVSGSTPAQRIKDEYP----GVQLQQYDTYS 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + DA T D L + P ++ D S+ + + DTE N Sbjct: 178 ACVEALKNGAVDALTTDEVILAGYAAQS--PGTFKLVGDTFSEERYGIGLKKDDTELRNK 235 Query: 241 VSWTHY------AMVTAEELGITQKNINQVSKDTTNPD 272 ++ A A + + I + D Sbjct: 236 INDAIEKMESSGAWKEAFDKNLGPAGIQAPQPPAVDRD 273 >gi|81428470|ref|YP_395470.1| amino acid ABC transporter substrate-binding protein [Lactobacillus sakei subsp. sakei 23K] gi|78610112|emb|CAI55161.1| Putative amino acid ABC transporter, substrate-binding lipoprotein precursor [Lactobacillus sakei subsp. sakei 23K] Length = 267 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 36/241 (14%), Positives = 80/241 (33%), Gaps = 8/241 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 I++R + GI+ V + NG GFDV+ +A+ ++ + Sbjct: 27 QKTDSWATIERRQKVVIGIDDSFVPMTYREKNGQLTGFDVELAKAIFK---GSGIQVDFQ 83 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 ++ + L ++ ID++ T R + F + Q + K+ ++ ++ Sbjct: 84 SIDWDMKETELNNQTIDLIWSGYSKTEERAKRVA--FSQPYLTNHQMIVSMKQNPVNRLA 141 Query: 142 QLSGASICVQAGTTTELTLADY---FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L G ++ VQ G++ L K PI+++ +A R D Sbjct: 142 DLKGQNLGVQTGSSGMAQLDRRPTVLKQKIANQTPILYDTYNNAFIDLQAKRIKGILIDQ 201 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + + + A + D + ++ + + +L Q Sbjct: 202 VYANFEIKARANGQDFQAIESPFAAEKFAVGMRPEDQKLRRFINRRYQVLKQNGQLAKIQ 261 Query: 259 K 259 Sbjct: 262 A 262 >gi|329934517|ref|ZP_08284558.1| sugar-binding protein [Streptomyces griseoaurantiacus M045] gi|329305339|gb|EGG49195.1| sugar-binding protein [Streptomyces griseoaurantiacus M045] Length = 337 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 81/240 (33%), Gaps = 15/240 (6%) Query: 16 FFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKAN----GDWKGFDVDFCRALSS 69 + + + IK R L G++ + N + +GFD+D R ++ Sbjct: 68 SLSPSEADGDTVKAIKSRAHPRLVIGVDQNSYRWGYRDPNRSGSSELEGFDIDLARRIAR 127 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 I DP + + + +R A++S ++D++ R T R + F + GQ Sbjct: 128 EILGDPDAVVFRAIPTNQRTEAIRSGRVDMVVRTMTITCDRLRQVA--FSAPYFRTGQQV 185 Query: 130 IMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHP---IVFERVEEIDAA 185 + +K I+ L+ +C G+T L + + + + Sbjct: 186 LAPRKSDITGYDDTLAHKRVCSATGSTALTQLTADRGSGRIPPSTDISVTVPNQLDCLVR 245 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + DA D + + + + + A+ +G + V+ Sbjct: 246 LQLGQVDAVVTDGALAASQAAQDP---TVELKGRPFTTEYYGVAMKKGADDLVRRVNRVL 302 >gi|283852824|ref|ZP_06370087.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. FW1012B] gi|283571816|gb|EFC19813.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. FW1012B] Length = 270 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 85/256 (33%), Gaps = 20/256 (7%) Query: 1 MYKDFFVSILCLIILFFTSFST---------NASILGDIKKRGFLKCGINTGLVGFAEVK 51 M + + L + L ++ S L I +RG L G+ F V Sbjct: 1 MIRFIRIVSLAFVALTMCCGTSVAVTPFDVYEGSNLRKIVQRGTLVVGMELKFWPFEYVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G+ GFDVD R L+ + ++ + AL + +ID++ TL R Sbjct: 61 EQGNPVGFDVDIARTLAERLGVK---LEIKDMEWTGLIPALTAGKIDLIISGITGTLERG 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNM 169 S+ T K ++ + L G I V+ GTT +L F Sbjct: 118 KSITFTSPYFTTGLCALLSAQKAGDVTDAAALDAPGRIIAVKTGTTADLVATKRFPKA-- 175 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + A R DA+ D ++ K P L + P A Sbjct: 176 --TINRYSDETACVQEVVAGRVDAFFYDQISI--GKHHRQNPETTKALLTPFTYEPFCIA 231 Query: 230 IIQGDTEWYNIVSWTH 245 + +GD +W+ + Sbjct: 232 LQKGDFDWWQWLESYL 247 >gi|83646475|ref|YP_434910.1| cystine transporter subunit [Hahella chejuensis KCTC 2396] gi|83634518|gb|ABC30485.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Hahella chejuensis KCTC 2396] Length = 266 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 81/230 (35%), Gaps = 13/230 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T +L I+KRG ++ G+ F NG GF+V+F +AL+ + Sbjct: 25 TPSFAAEDLLQSIQKRGSIQVGLEGTYPPFNYQDENGQLTGFEVEFAKALADRLGVKAE- 83 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--K 135 Y AL+S+++D++ + R+ F G + K Sbjct: 84 --YQTTKWDGLLAALESERLDVVINQVTISDARKK--KYDFSAPYTVSGIQALTRKDLES 139 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ S L+G + V GT E L + ++ + ++ R R DA Sbjct: 140 EINGPSDLAGMKVGVGLGTNYETWL----RENSPQAEVKTYDDDPTKYQDLRFGRIDAIL 195 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D A +L N + S+ A+ +G+ E + Sbjct: 196 IDR--FAAFELLNKTGDALALSGAPFSRQEAGVALRKGNPELLAAIDQAI 243 >gi|146320879|ref|YP_001200590.1| putative amino acid transporter, amino acid-binding protein [Streptococcus suis 98HAH33] gi|145691685|gb|ABP92190.1| putative amino acid transporter, amino acid-binding protein [Streptococcus suis 98HAH33] gi|292558356|gb|ADE31357.1| putative amino acid transporter [Streptococcus suis GZ1] Length = 315 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 92/264 (34%), Gaps = 18/264 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEV---KAN 53 M K + ++ L + ++ S NA+ L D++++G L +N F Sbjct: 47 MKKYIMMGLVLLATMTLSACSGNATQEDTSLKDVQEKGKLIVALNPEFPPFEFRTLVDGK 106 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G D++ +A+ + + +++ ++ +QS Q DI T R Sbjct: 107 DTIVGADIELAKAIGQELGVE---VEFSAMSFDNVLNNVQSGQSDIAISGISATEERAKV 163 Query: 114 LGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F Y I++K+ +S+ L+ A+I Q G+ E + + + Sbjct: 164 --YDFSIPYYTSTNKVIINKEDLAQYTSLDSLAEANIGAQKGSIQEQIIKEQLPS----S 217 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 I E+ ++ + +A + A ND A A+ Sbjct: 218 TVIALASNGELINQLKSQKVEAVIFEEPIAKAYVAKNDDLVILDTEIKSSYSDAYAIALP 277 Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255 +G T V +V + ++ Sbjct: 278 KGSTALKEKVDSVITKLVESGQMD 301 >gi|115360308|ref|YP_777446.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia ambifaria AMMD] gi|115285596|gb|ABI91112.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 260 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 19/254 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ + + +L ++ A K L+ G + F +G GFD Sbjct: 1 MKR--LIAAVSIALLAVSAGPAAA------KDWTTLRFGTDASYAPFESKAPDGKLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + +K +L + AL++K+ D + + T R +G Sbjct: 53 IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITPQRAEQIGFT-TK 108 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I + + + + L G SI V+ GTT E Y+ + + ++ + Sbjct: 109 IYNQPTRLVVKKGSSLLPTAESLKGKSIGVEQGTTQEAYAKAYWAKQG--ANVVSYQNQD 166 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + A + R DA D L + R + + + + + + + DT Sbjct: 167 GVYADLTSGRLDAALQDEVQAAIGFLKSPRGAGYQFVGPELIDEKVLGIGAGIGLRKEDT 226 Query: 236 EWYNIVSWTHYAMV 249 + + MV Sbjct: 227 DLKAKIDRAILDMV 240 >gi|229591447|ref|YP_002873566.1| putative ABC transporter extracellular solute-binding protein [Pseudomonas fluorescens SBW25] gi|229363313|emb|CAY50429.1| putative ABC transport system, extracellular solute-binding protein [Pseudomonas fluorescens SBW25] Length = 277 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 90/257 (35%), Gaps = 15/257 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + L L L A L DI + L CG+ + F+ + G Sbjct: 1 MGMKHLFTALALGPLAVAI--AQADQLSDIMAKQSLSCGVYADVPPFSAPDPKTRELVGM 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C+AL+ + ++ PL+ + R ++ ++D++ N +T R + F Sbjct: 59 DVDLCKALAKTMG---VALELKPLSVEARIPEVKMGRVDVIFANLAYTKTRAEQIQ--FS 113 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + ++ S I G+T+E ++ P+ F+ Sbjct: 114 DPYYIAKETLVVRAANADQPKSFFKDKRISSTKGSTSEQSIR------LAGATPVTFQDT 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWY 238 A + ++ + L + L + ++ P+ + + + + Sbjct: 168 GSAYMALQQNKVVGLVTNTMTALKLVNQAKAGGVELALAKEPMALEPIGAGMRRDEPAFL 227 Query: 239 NIVSWTHYAMVTAEELG 255 V+ + AM A E+ Sbjct: 228 AKVNESLMAMEKAGEID 244 >gi|169832654|ref|YP_001694829.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae Hungary19A-6] gi|168995156|gb|ACA35768.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae Hungary19A-6] Length = 271 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L F + + + S + IK++G L + F V Sbjct: 4 KKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + + A A+ + Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234 Query: 233 GDTEWYNIVSWTHY 246 + +V Sbjct: 235 NSDDLKEVVDKVIQ 248 >gi|145640765|ref|ZP_01796348.1| CTP synthetase [Haemophilus influenzae R3021] gi|145274691|gb|EDK14554.1| CTP synthetase [Haemophilus influenzae 22.4-21] Length = 257 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 83/249 (33%), Gaps = 13/249 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L + F++FS I ++K L G F +G GFD Sbjct: 1 MKKLLFTTALLTGAIAFSTFSHAGEIADRVEKTKTLLVGTEGTYAPFTFHDKSGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R ++ + K+++ + L +K+ D+++ T E +F Sbjct: 61 VEVIRKVAEKLG---LKVEFKETQWDAMYAGLNAKRFDVIANQT--NPSPERLKKYSFTT 115 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + I S L G + KA +V + + Sbjct: 116 PYNYSGGVIVTKSSDNSIKSFEDLKGRKSA----QSATSNWGKDAKAAG--AQILVVDGL 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R +A D A+ + I D K+P A A +QG+ Sbjct: 170 AQSLELIKQGRAEATINDKLAVLDYFKQHPNSG-LKIAYDRGDKTPAAFAFLQGEDALIT 228 Query: 240 IVSWTHYAM 248 + A+ Sbjct: 229 KFNQVLEAL 237 >gi|114566597|ref|YP_753751.1| glutamine ABC transporter glutamine-binding protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337532|gb|ABI68380.1| glutamine ABC transporter, glutamine-binding protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 263 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 94/262 (35%), Gaps = 14/262 (5%) Query: 1 MYKDFFVSILCLI----ILFFTSFSTNASILGDIK--KRGFLKCGINTGLVGFAEVKANG 54 M K V ++ L+ ++ + + ++G L G F + +G Sbjct: 1 MKKWIKVLMVGLLITGLLVTVIGCKAQQNNNDSAQESQKGKLIVGTEATFPPFEMI-KDG 59 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 ++ GFD+D RA+ + + ++ L A+QS ID + + + Sbjct: 60 EYSGFDMDIIRAIGKSQGYE---VEIKNLGFDALIPAVQSGNIDCVIAAVTI--DEDRAK 114 Query: 115 GLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + G + ++ I++ L G I Q GTT T K + + Sbjct: 115 VVDFSQPYFDAGLIIAVKQETTGITTTKDLQGKRIAAQVGTTGADTCLK-IKDKDPSTNV 173 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +FE V E + DA D T+ S ++ + S A+ +G Sbjct: 174 KIFESVGEAFMELQKGGVDAVINDHPVTADYIKTSGNDSVKMVGEVFSADSQYGIAVKKG 233 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 +++ N ++ + + E Sbjct: 234 NSKLLNDINAGLDELKASGEYE 255 >gi|152969450|ref|YP_001334559.1| arginine 3rd transport system periplasmic binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893921|ref|YP_002918655.1| arginine 3rd transport system periplasmic binding component [Klebsiella pneumoniae NTUH-K2044] gi|329998468|ref|ZP_08303105.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Klebsiella sp. MS 92-3] gi|150954299|gb|ABR76329.1| arginine 3rd transport system periplasmic binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546237|dbj|BAH62588.1| arginine 3rd transport system periplasmic binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328538658|gb|EGF64754.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Klebsiella sp. MS 92-3] Length = 243 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 76/252 (30%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + + G++ F + AN GFD Sbjct: 1 MKKLVLAALLTSFAFGAAAAE-------------KISFGVSATYPPFESMDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + ++ + AL+ K+ D + D T R + F Sbjct: 48 IDLAHALCKQM---QAECTFTNHAFDSLIPALKFKKYDAVISGMDITPERSKQVA--FTD 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++ KK S L G I ++ GTT + L D + ++ + Sbjct: 103 PY-YANSALVIAKKDAFHSFDDLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P P + L A+ + Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGAATPKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNAALKAI 227 >gi|295401071|ref|ZP_06811045.1| extracellular solute-binding protein family 3 [Geobacillus thermoglucosidasius C56-YS93] gi|294976864|gb|EFG52468.1| extracellular solute-binding protein family 3 [Geobacillus thermoglucosidasius C56-YS93] Length = 270 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 72/228 (31%), Gaps = 13/228 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S +L +KK G L+ G F +G+ GFDVD R ++ + P Sbjct: 32 SGKKETDLLAQVKKEGELRIGTEGTYPPFTFHDQSGELTGFDVDLAREVAKRLGVKP--- 88 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ F L +K+ D+++ R+ F ++HK Sbjct: 89 VFMETQWDAMFAGLDAKRFDMIANEVGI--RRDRQKKYDFSDPYITSMAVLVVHKDNNKV 146 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S + Q+ T+ LA + A + E + + R D D Sbjct: 147 SKFENIKGLKAAQSMTSNFADLARSYGA-----QIVGVEGFNQAVELLSSKRVDVTINDN 201 Query: 199 -SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 S L L+ + P I+ S +G V+ Sbjct: 202 LSVLDFLRQKPNAPI--KIVAKHKEASQSGFMFRKGSDTLVEAVNKAL 247 >gi|169827725|ref|YP_001697883.1| cystine-binding periplasmic protein [Lysinibacillus sphaericus C3-41] gi|168992213|gb|ACA39753.1| Cystine-binding periplasmic protein precursor (CBP) (Protein fliY) (Sulfate starvation-induced protein 7) (SSI7) [Lysinibacillus sphaericus C3-41] Length = 257 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 37/241 (15%), Positives = 76/241 (31%), Gaps = 10/241 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 + + +I+L S S D + GI+ + GFD+D Sbjct: 1 MMLTAVIVLAACGTSKEKSTEKDPSSADQEKIIIGIDDKFAPMGFRDDKNEIVGFDIDLA 60 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RA + + + + P++ K + L S +ID++ T R+ + F Sbjct: 61 RAAAEHMGVEAE---FQPIDWKTKEAELLSGRIDLIWNGYTITDERKE--KVLFTKPYLE 115 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + Q + I ++ L+G + +Q+ ++ L H F + Sbjct: 116 NSQVVMTKADSKIVKLTDLAGTEVGIQSLSSAADALN-GNPIHKEIKTITEFSDNVLALS 174 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + R DA D P +L + ++ + G+ + Sbjct: 175 DLKTGRVDAVVIDAVVAEYYMTQ--EPDTFKLLEESLAPEQYGIGVKPGNEALLEKLQAA 232 Query: 245 H 245 Sbjct: 233 L 233 >gi|148653873|ref|YP_001280966.1| extracellular solute-binding protein [Psychrobacter sp. PRwf-1] gi|148572957|gb|ABQ95016.1| extracellular solute-binding protein, family 3 [Psychrobacter sp. PRwf-1] Length = 264 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 35/236 (14%), Positives = 74/236 (31%), Gaps = 12/236 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + ++ T S + + ++ F +G GF Sbjct: 10 RTSLSVLALAAVVGLTGCSKSEDTKAGEATSAEGKTIRIATEGAYPPFNYTNNDGSLGGF 69 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A+ + +K + + + L + + D + T R + + F Sbjct: 70 DVDVANAVCEQM---KAKCEIVAQDWDGIIPGLLANKYDAIIAGMSITPERAAT--VDFS 124 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + ++ K S ++ + Q TT L D F +++ Sbjct: 125 APYFSNTMVWLAKKDGS-FSPDDVTNKDLGSQRSTTLGEYLLDNFD-GKDGNKINLYDTY 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E ++ R DA + + + P VI +I + L A+ + D Sbjct: 183 ENAYLDLKSGRVDAVLAEKVSAADWLP--ENPDYAVIGEEIDNDDHLGIALRKNDP 236 >gi|254248818|ref|ZP_04942138.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] gi|124875319|gb|EAY65309.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] Length = 279 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 91/254 (35%), Gaps = 19/254 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ + + +L ++ A K ++ G + F +G GFD Sbjct: 20 MKR--LIAAVSIALLAVSAGPAVA------KDWTTIRFGTDASYAPFESKAPDGKLVGFD 71 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + +K +L + AL++K+ D + + T R +G Sbjct: 72 IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITPQRAQQIGFT-TK 127 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I + + + + L G SI V+ GTT E Y+ + + ++ + Sbjct: 128 IYNQPTRLVVKKGSSLLPTAESLKGKSIGVEQGTTQETYAKAYWGKQG--ANVVSYQNQD 185 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + A A R DA D L + R + + + + + + Q DT Sbjct: 186 GVYADLIAGRLDAALQDEVQAAIGFLKSPRGANYTFVGPELVDEKMLGIGAGIGLRQEDT 245 Query: 236 EWYNIVSWTHYAMV 249 + + + MV Sbjct: 246 DLKAKIDRAIHDMV 259 >gi|323186304|gb|EFZ71654.1| cystine-binding periplasmic protein [Escherichia coli 1357] Length = 252 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 84/240 (35%), Gaps = 13/240 (5%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 + L+ + +L +K+RG L G+ F+ +G GF+V+F + L Sbjct: 1 MAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQL 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + + P +L SK+ID++ + R+ F G Sbjct: 61 AKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISGI 115 Query: 128 GFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K I + + L G + V GT E ++ + + ++ Sbjct: 116 QALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQD 171 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 172 LRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDAM 229 >gi|254303609|ref|ZP_04970967.1| ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323801|gb|EDK89051.1| ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 253 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 96/259 (37%), Gaps = 18/259 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V ++ ++ + N + I KRG L G + F + NG+ KG+D Sbjct: 1 MKKILIVLLITIVSVISY---ANNDGVEKILKRGVLYVGTTSDYKPFTYI-ENGEHKGYD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ + ++ + ++++P K LQ+ + DI T R+ + Sbjct: 57 IEVAKLIAKELGVK---VEFVPTTWKTLLDDLQAGKFDIAMGGITRTTKRQTICNM--TN 111 Query: 121 ITYFDGQGFIMHK--KKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 G+ F++ K K +S+ + + V G T E + +Y I + Sbjct: 112 PYLVFGKCFLVRKGDKNKYNSLEAVNKPNVRVGVNIGGTNEALVNEYIAKA----TVIRY 167 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + ++ A D + + N + E +L ++KS + I + + Sbjct: 168 KNNLDVPVALEKGEVDVMITETPEAITYQKNNPK-LEGALLDKTLTKSQMGYMIAKENQH 226 Query: 237 WYNIVSWTHYAMVTAEELG 255 N V++ + E+ Sbjct: 227 LLNTVNFILSELELRGEIE 245 >gi|5929889|gb|AAD56629.1|AF165218_4 AatB [Streptococcus pneumoniae WU2] Length = 278 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K V + + LF + T+ + + G ++ V + +G Sbjct: 1 MKKWMLVLVSLMTALFLVACGKNSSETSGDNWSKYESNKSITIGFDSTFVPMGFAQKDGS 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D A+ + + P++ + L ID++ T R Sbjct: 61 YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATYER--REK 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYH 172 +AF + Q + K GI++ ++G ++ QAG++ + Sbjct: 116 VAFSNSYMKNEQVLVTKKLSGITTAKDMTGKTLGAQAGSSGYADFEANPEILKNIVANKE 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++ E + R D D +++ + + A + Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARK 235 Query: 233 GDTEWYNIVSWT 244 DT ++ Sbjct: 236 EDTTLVKKINEA 247 >gi|297160476|gb|ADI10188.1| putative ABC transporter solute-binding protein [Streptomyces bingchenggensis BCW-1] Length = 338 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 46/263 (17%), Positives = 86/263 (32%), Gaps = 22/263 (8%) Query: 15 LFFTSFSTNASILGDIKKR-------GFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRA 66 S + + IK R G L G++ + GD GFD++ RA Sbjct: 62 ASLRPSSASGPAIQRIKNRKVDGHRLGKLIAGVDQNSYRWGYRDPATGDLTGFDIELVRA 121 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ IF DP + Y + +R ALQ ++DI+ R + +AF + G Sbjct: 122 IAKDIFGDPDAVIYRAIPTSQRVKALQQGKVDIVVRTMTINC--DRLKDVAFSTAYFKAG 179 Query: 127 QGFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFERVEEID 183 Q ++ K ++ + L G +C G+T E L + + Sbjct: 180 QQVLVPKGSSVTGYNTSLRGKKVCTAQGSTAEAELDKEKGGADDLGAIKVDPVPNQLDCL 239 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + + DA D + + ++ ++ A+ + D + V+ Sbjct: 240 VRLQLGQVDAVITDNALAAGQAAQDP---SVKLVGKPFTEEFYGVAMNKDDEDLVRRVNK 296 Query: 244 THYAMVTAEELGITQKNINQVSK 266 E N + Sbjct: 297 VL------EGYRSGGDNSPWMRA 313 >gi|238019978|ref|ZP_04600404.1| hypothetical protein VEIDISOL_01854 [Veillonella dispar ATCC 17748] gi|237863502|gb|EEP64792.1| hypothetical protein VEIDISOL_01854 [Veillonella dispar ATCC 17748] Length = 270 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 92/285 (32%), Gaps = 25/285 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K V + + ++ F + + + + + + G++ G+ G D+ Sbjct: 4 KKMMAVGLAAVSMMVFVTGCGSDTKTANTELPKKIVIGLDDSFPPMGFKDDKGEIVGLDI 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + + ++++ ++ + L+SK+ID L + RE + F Sbjct: 64 DMAKEAAKRAG---MEVEFKAIDWSSKEAELKSKKIDALWNGLTVSPEREK--NILFSNP 118 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 D Q ++ I S + L+G + VQ +T E L + + + Sbjct: 119 YMKDKQYIVVRNDDDSIKSKADLAGKVVGVQQASTGESALQND-PSGKTVKETKSYADFV 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYN 239 R DA D A L P ++ I+ A + DT + Sbjct: 178 SAFMDLGIGRVDAVIADGVI--ARYLMTKEPGKYKIVDGTDYGVDNFAVGFRKDDTALRD 235 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284 ++ + T + V+++LG + Sbjct: 236 NINGIL---------------ADMKKDGTADKIVEKWLGSSADLD 265 >gi|206579100|ref|YP_002239548.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Klebsiella pneumoniae 342] gi|288936393|ref|YP_003440452.1| cationic amino acid ABC transporter periplasmic binding protein [Klebsiella variicola At-22] gi|290510552|ref|ZP_06549922.1| glutamine ABC transporter periplasmic protein [Klebsiella sp. 1_1_55] gi|206568158|gb|ACI09934.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Klebsiella pneumoniae 342] gi|288891102|gb|ADC59420.1| cationic amino acid ABC transporter, periplasmic binding protein [Klebsiella variicola At-22] gi|289777268|gb|EFD85266.1| glutamine ABC transporter periplasmic protein [Klebsiella sp. 1_1_55] Length = 248 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 81/247 (32%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F VS+ L + F S L +T V F + + + GFD Sbjct: 1 MKSVFKVSLAALTLAFAVSSHAANKT---------LVVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + D P++ ALQ+K ID+ T R+ + F Sbjct: 51 VDLWAAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITDERKK--AIDFSD 105 Query: 121 ITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G + I V L+G + V++GT + DY KA+ F + Sbjct: 106 GYYKSGLLVMVNANNNDIKDVKDLNGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + T + + + A +G E Sbjct: 162 DNAYMELGTGRADAVLHDTPNILYFIKTAGNGK-FKAVGESLEAQNYGIAFPKGSDELRE 220 Query: 240 IVSWTHY 246 V+ Sbjct: 221 KVNGALK 227 >gi|104774237|ref|YP_619217.1| glutamine-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423318|emb|CAI98159.1| Glutamine-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 292 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 79/229 (34%), Gaps = 8/229 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77 S S K+ + G+ F G +GF++D A++ I SK Sbjct: 36 CSSKQESSYARAKQSKQITWGVRPDTKLFGLTNIKTGKIEGFEIDLATAITKQILGPKSK 95 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + P+ K R L + +D + T R + F + + + I+ K I Sbjct: 96 AVFRPITEKTRITLLHNGSLDAVISTMTITKER--MKVIDFSDVYFNANESMIVKKSSKI 153 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S++ L+ + V A T+ +A+ K F+ A +A + D D Sbjct: 154 RSIADLNKKGVVVIAIKGTD--VANQVAKLASKASVKQFDDYGSAFNALKAGQGDVMIDD 211 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 L L E + +++ P + +G TE ++ Sbjct: 212 NGILAGLIADTP---EFTLTKASLAEEPYGIGVEKGQTEMRQAINQALK 257 >gi|291617814|ref|YP_003520556.1| FliY [Pantoea ananatis LMG 20103] gi|291152844|gb|ADD77428.1| FliY [Pantoea ananatis LMG 20103] gi|327394231|dbj|BAK11653.1| cystine-binding periplasmic protein precursor FliY [Pantoea ananatis AJ13355] Length = 288 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 82/241 (34%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + + L+ F +L +K +G L+ G+ F+ G GF+V+F + Sbjct: 36 MMAVALVAGFSVKTFAADDLLAQVKSKGELRVGLEGTYPPFSFQDEKGKLTGFEVEFAQD 95 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + P AL SK+ID++ + R+ F G Sbjct: 96 LAKHMGVKA---VLKPTKWDGMLAALDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 150 Query: 127 QGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + KK I+ L+G + V GT E L +A+ ++ Sbjct: 151 VQALTLKKNAGSITKPEDLAGKKVGVGLGTNYEQWL----RANVKGVDIRTYDDDPTKYQ 206 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R+ R DA D L AL L + S+ A+ +G+ + + Sbjct: 207 DLRSGRVDAILVDR--LAALDLVKKTGDTMAVAGPAFSRLEAGVALRKGNEDLLKAIDQA 264 Query: 245 H 245 Sbjct: 265 I 265 >gi|229816580|ref|ZP_04446879.1| hypothetical protein COLINT_03638 [Collinsella intestinalis DSM 13280] gi|229807915|gb|EEP43718.1| hypothetical protein COLINT_03638 [Collinsella intestinalis DSM 13280] Length = 315 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 38/289 (13%), Positives = 91/289 (31%), Gaps = 23/289 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGD--------------IKKRGFLKCGINTGLVG 46 M + V+ ++ + + L G + Sbjct: 35 MTRRSLVAGAASAVMALALLAGCGATPKATDAGSAPKTAEDTSAAATSKLIVGFDQAYPP 94 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + V +G++ GFD+D +A++ + + ++ P++ + + + S I+ + Sbjct: 95 YGYVGDDGEYTGFDLDLAKAVAEKLDWE---VELEPIDWEAKDALMDSGAINCIWNGFTM 151 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA-DYFK 165 + F + Q ++ GI++ + L+G ++ Q + E L D Sbjct: 152 EGRED---DYTFSDPYMLNAQVIVVRADDGIAAQADLAGKTVVTQIDSAAEEVLEGDAAD 208 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 + DA D+S A + +P +++L + +S+ Sbjct: 209 LAATFASLETIGEYNTAFMQLESGAVDAVACDLSI--ARYQMSAKPDAYLMLDEYLSEEN 266 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 A +GDT V+ + + N ++ Sbjct: 267 YAVGFKKGDTATAKKVAEALKKLYKDGTVEQIAAKYADQGLTMDNWQIK 315 >gi|229019367|ref|ZP_04176191.1| Arginine-binding extracellular protein artP [Bacillus cereus AH1273] gi|229025613|ref|ZP_04182020.1| Arginine-binding extracellular protein artP [Bacillus cereus AH1272] gi|228735707|gb|EEL86295.1| Arginine-binding extracellular protein artP [Bacillus cereus AH1272] gi|228741935|gb|EEL92111.1| Arginine-binding extracellular protein artP [Bacillus cereus AH1273] Length = 260 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 88/255 (34%), Gaps = 11/255 (4%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWK 57 M K L LI+ F++ S D K + L G + + V+A+ + Sbjct: 1 MKKLLSISFALILIVSMFSACSNGEEKAADSKNKKVLVMGTSADYKPYEYVEASKSDEII 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD + + + + ++ ++ +L S ++D + T + Sbjct: 61 GFDVDIAKYIGKELGYE---VKVKDMDFGGLLASLNSGKVDFVMAGMTPTA--DRKNNAD 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F I + + K I S+ L G + VQ G+ E ++ K + K + Sbjct: 116 FTDIYFVAKNMIVSKKGSNIKSLEDLKGKKVGVQTGSIQEEKAKEFQKQVDFKAEGR--D 173 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R+ EI +A R DA + + + + + + + A A+ + + Sbjct: 174 RIPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKE-LQGIEIQEAPEEVGAAIALPKNSDKT 232 Query: 238 YNIVSWTHYAMVTAE 252 E Sbjct: 233 EEFNKVIKKMQENGE 247 >gi|224823995|ref|ZP_03697103.1| cationic amino acid ABC transporter, periplasmic binding protein [Lutiella nitroferrum 2002] gi|224603414|gb|EEG09589.1| cationic amino acid ABC transporter, periplasmic binding protein [Lutiella nitroferrum 2002] Length = 256 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 89/253 (35%), Gaps = 23/253 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L + + K+ ++ G++ F +G GFD Sbjct: 1 MNKLVLAVTLGLALGSVNA-----------KELTVIRFGLDPSYAPFESKSPDGKLVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + + +++ AL++K+ D + + T R +AF Sbjct: 50 IDIGNAICDKL---KVRCEWVENAWDGIIPALKAKKFDAILSSMSVTEKR--QQQIAFSD 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + K ++SV L G I V+ G+T E Y++ + + ++ + Sbjct: 105 KVYHTPSRLVARKNAALTSVESLKGKRIGVEQGSTQEAYAKQYWEPNG--VTVVSYQNQD 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + + R DA D L R ++ + ++ + A + + D Sbjct: 163 LVYQDLLSGRLDAALQDSVQADMSLLKTPRGRDYAFVGPVLHDAKTLGVGAAIGLRKEDQ 222 Query: 236 EWYNIVSWTHYAM 248 E ++ A+ Sbjct: 223 ELRQRINQAITAI 235 >gi|325957194|ref|YP_004292606.1| amino acid ABC transporter periplasmic protein [Lactobacillus acidophilus 30SC] gi|325333759|gb|ADZ07667.1| amino acid ABC transporter periplasmic protein [Lactobacillus acidophilus 30SC] Length = 286 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 56/263 (21%), Positives = 100/263 (38%), Gaps = 30/263 (11%) Query: 2 YKDF--FVSILCLIILFFTS----------------FSTNASILGDIKKRGFLKCGINTG 43 K F +S++ +++ ++ +N + + IK+RG+++ G+ Sbjct: 4 RKIFNTIISVIAAVVVLASAYMGLTKPYLARSAGGSGWSNNNSVTQIKRRGYIRIGVYGD 63 Query: 44 LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 L + V + G GFD+ R L+ + P ++ LN R AL S ++D++ N Sbjct: 64 LPPYGWVNSQGKRVGFDLRLARELAKELGVKP---RFTQLNGNNRVDALNSNKVDMVLAN 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R + F G + K I+S QL G + + G+T E Sbjct: 121 FTKTPERAEV--VDFAHPYMKVSTGVVSPKSHPITSEKQLRGKQLILLKGSTGENYF--- 175 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 A+ + F+ + A + R A D S LYA P V + I Sbjct: 176 --ANRPGIKLLRFDSETQQFNAMKNKRGAALADDNSYLYAWI--KKNPQYVVGIRSIGPH 231 Query: 224 SPLAPAIIQGDTEWYNIVSWTHY 246 +APA+ +G+ + Sbjct: 232 QFIAPAVKKGNKSLLKWTNKQIN 254 >gi|298252814|ref|ZP_06976608.1| ABC-type amino acid transport/signal transduction system, periplasmic component [Gardnerella vaginalis 5-1] gi|297533178|gb|EFH72062.1| ABC-type amino acid transport/signal transduction system, periplasmic component [Gardnerella vaginalis 5-1] Length = 255 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 86/218 (39%), Gaps = 9/218 (4%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 + ++ GI G +G + GFDVD + ++ + +I + +K+R L Sbjct: 12 KKVIRIGIKFDQPGMGFK-KSGTYVGFDVDVAKYVAKKLGYSEDQIVWKESPSKQRETML 70 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQ 151 Q+ +D++ T R+ ++F + GQ ++ K + +S + L G +C Sbjct: 71 QNGDVDMIVATYSITDARKKM--VSFAGPYFIAGQDLLIRKDEHKVSGPNDLDGKRLCSV 128 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 +G+T+ + + + + + K + E A + DA T D L L + Sbjct: 129 SGSTSAIAIKERYSS---KVQLMQQPGYAECATALFSGIVDAVTTDDIILAGLATASR-- 183 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 ++ + I +G+T ++ M+ Sbjct: 184 GRLKLVGKPFTAEYYGIGIKKGNTGLAKKINAALKDMI 221 >gi|239616531|ref|YP_002939853.1| extracellular solute-binding protein family 3 [Kosmotoga olearia TBF 19.5.1] gi|239505362|gb|ACR78849.1| extracellular solute-binding protein family 3 [Kosmotoga olearia TBF 19.5.1] Length = 240 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 85/247 (34%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + F G + F V NG++KGFD Sbjct: 1 MRKLSLVILLVALAAFAFG--------------KTYVVGTSADFPPFEYV-ENGEFKGFD 45 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D RA++ + + I+ + ++ AL S +DI+ T RE + F Sbjct: 46 MDLIRAIADEMGFN---IKIVDMSFDSLIAALVSGNLDIVIAGMTITAEREAV--VDFSK 100 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179 + Q I+ + + I VQ GTT +L + + + ++ Sbjct: 101 PYWTADQSIIVKEDSDYTVTVLFGKHDIGVQTGTTGDLWVEENLVKTKILTGKFKRYDTF 160 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 DA D A + RP I+ I++ A+ +G+ E N Sbjct: 161 VLALTDLINGNVDAIVLDSP--VAERFAETRPV--KIVGIIVTGEEYGIAVREGNKELLN 216 Query: 240 IVSWTHY 246 +++ Sbjct: 217 LINEGIQ 223 >gi|196034782|ref|ZP_03102190.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus W] gi|228925612|ref|ZP_04088701.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228944165|ref|ZP_04106544.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|301052081|ref|YP_003790292.1| amino acid ABC transporter periplasmic amino acid-binding protein [Bacillus anthracis CI] gi|195992825|gb|EDX56785.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus W] gi|228815554|gb|EEM61796.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228834090|gb|EEM79638.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|300374250|gb|ADK03154.1| amino acid ABC transporter, periplasmic amino acid-binding protein; bacterial extracellular solute-binding protein, family 3 [Bacillus cereus biovar anthracis str. CI] Length = 264 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + P+ I + L++K+ D++ + T R + F Sbjct: 61 FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KHTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|16130245|ref|NP_416813.1| lysine/arginine/ornithine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|89109130|ref|AP_002910.1| lysine/arginine/ornithine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|157157871|ref|YP_001463654.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E24377A] gi|157161797|ref|YP_001459115.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli HS] gi|170019381|ref|YP_001724335.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli ATCC 8739] gi|170081926|ref|YP_001731246.1| lysine/arginine/ornithine ABC transporter periplasmic-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|188494040|ref|ZP_03001310.1| putative histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli 53638] gi|191169481|ref|ZP_03031215.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli B7A] gi|194432905|ref|ZP_03065189.1| lysine-arginine-ornithine-binding periplasmic protein [Shigella dysenteriae 1012] gi|194436153|ref|ZP_03068255.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli 101-1] gi|238901485|ref|YP_002927281.1| lysine/arginine/ornithine transporter subunit [Escherichia coli BW2952] gi|253772766|ref|YP_003035597.1| cationic amino acid ABC transporter periplasmic binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162319|ref|YP_003045427.1| lysine/arginine/ornithine transporter subunit [Escherichia coli B str. REL606] gi|256022005|ref|ZP_05435870.1| lysine/arginine/ornithine transporter subunit [Escherichia sp. 4_1_40B] gi|297516046|ref|ZP_06934432.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli OP50] gi|300948541|ref|ZP_07162635.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 116-1] gi|300956422|ref|ZP_07168713.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 175-1] gi|301023557|ref|ZP_07187321.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 196-1] gi|301647587|ref|ZP_07247384.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 146-1] gi|307138975|ref|ZP_07498331.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H736] gi|309793193|ref|ZP_07687621.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 145-7] gi|331642949|ref|ZP_08344084.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Escherichia coli H736] gi|3183509|sp|P09551|ARGT_ECOLI RecName: Full=Lysine-arginine-ornithine-binding periplasmic protein; Short=LAO-binding protein; Flags: Precursor gi|1788649|gb|AAC75370.1| lysine/arginine/ornithine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|1799691|dbj|BAA16156.1| lysine/arginine/ornithine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|157067477|gb|ABV06732.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli HS] gi|157079901|gb|ABV19609.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E24377A] gi|169754309|gb|ACA77008.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli ATCC 8739] gi|169889761|gb|ACB03468.1| lysine/arginine/ornithine transporter subunit; periplasmic-binding component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|188489239|gb|EDU64342.1| putative histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli 53638] gi|190900483|gb|EDV60298.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli B7A] gi|194418893|gb|EDX34978.1| lysine-arginine-ornithine-binding periplasmic protein [Shigella dysenteriae 1012] gi|194424881|gb|EDX40866.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli 101-1] gi|238861696|gb|ACR63694.1| lysine/arginine/ornithine transporter subunit [Escherichia coli BW2952] gi|242377943|emb|CAQ32712.1| argT, subunit of lysine/arginine/ornithine ABC Transporter [Escherichia coli BL21(DE3)] gi|253323810|gb|ACT28412.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974220|gb|ACT39891.1| lysine/arginine/ornithine transporter subunit [Escherichia coli B str. REL606] gi|253978387|gb|ACT44057.1| lysine/arginine/ornithine transporter subunit [Escherichia coli BL21(DE3)] gi|260448596|gb|ACX39018.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli DH1] gi|299880792|gb|EFI89003.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 196-1] gi|300316771|gb|EFJ66555.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 175-1] gi|300451951|gb|EFK15571.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 116-1] gi|301074277|gb|EFK89083.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 146-1] gi|308123479|gb|EFO60741.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 145-7] gi|315136945|dbj|BAJ44104.1| lysine/arginine/ornithine transporter subunit [Escherichia coli DH1] gi|315615579|gb|EFU96211.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli 3431] gi|320178715|gb|EFW53678.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Shigella boydii ATCC 9905] gi|323940993|gb|EGB37180.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E482] gi|323961383|gb|EGB56994.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H489] gi|323973106|gb|EGB68299.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TA007] gi|331039747|gb|EGI11967.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Escherichia coli H736] gi|332088441|gb|EGI93559.1| lysine-arginine-ornithine-binding periplasmic protein [Shigella boydii 5216-82] gi|332090099|gb|EGI95198.1| lysine-arginine-ornithine-binding periplasmic protein [Shigella dysenteriae 155-74] Length = 260 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 96/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L++ T+ S+ A++ ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSIL--ALSLLVGLSTAASSYAALPE------TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E + +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L + + + + D Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257 >gi|322616361|gb|EFY13270.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619611|gb|EFY16486.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622693|gb|EFY19538.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628605|gb|EFY25392.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631542|gb|EFY28298.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637069|gb|EFY33772.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641732|gb|EFY38368.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644475|gb|EFY41015.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650064|gb|EFY46481.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654143|gb|EFY50466.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658058|gb|EFY54325.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663532|gb|EFY59734.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670268|gb|EFY66408.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671504|gb|EFY67626.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676860|gb|EFY72927.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682785|gb|EFY78804.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686464|gb|EFY82446.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323196082|gb|EFZ81245.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196772|gb|EFZ81916.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202949|gb|EFZ87983.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208989|gb|EFZ93926.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211894|gb|EFZ96722.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215174|gb|EFZ99919.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222377|gb|EGA06755.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323229852|gb|EGA13975.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233077|gb|EGA17173.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240812|gb|EGA24854.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243129|gb|EGA27149.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248671|gb|EGA32599.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251672|gb|EGA35539.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257340|gb|EGA41038.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261928|gb|EGA45494.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267944|gb|EGA51423.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271989|gb|EGA55404.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 243 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 81/250 (32%), Gaps = 25/250 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + + G++ F + A+ GFD Sbjct: 1 MKKLVLAALLASFATGSIAAE-------------KINFGVSATYPPFESLDASNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + ++ + AL+ ++ D + D T R + F Sbjct: 48 IDLATALCKQM---QAECTFTNHAFDSLIPALKFRKYDAVISGMDITPERSKQVA--FSN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++ KK + + L G I ++ GTT + L D + ++ + Sbjct: 103 PY-YANSALVIAKKDTYKTFTDLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + TN + P+ + + L A+ + Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPQLGPATEKVTDPQYFGTGLGIAVRPDNKSLL 217 Query: 239 NIVSWTHYAM 248 ++ A+ Sbjct: 218 EKLNNALAAI 227 >gi|270261832|ref|ZP_06190104.1| hypothetical protein SOD_b00390 [Serratia odorifera 4Rx13] gi|270043708|gb|EFA16800.1| hypothetical protein SOD_b00390 [Serratia odorifera 4Rx13] Length = 257 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 87/253 (34%), Gaps = 22/253 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L+ A I G++ G F + +G+ GFD Sbjct: 1 MKK----TLAVLLTSLALGGPAAAQSFDTI------SFGVDGGYPPFDVLSPSGEITGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + +K ++ + AL +++ D + + T R+ + F Sbjct: 51 IDIANALCTQL---HAKCVFVKQPFESMIAALNARKFDAIIASLTITDERKK--EVDFTD 105 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K + + L G ++ VQ G+ E ++ + + Sbjct: 106 RYYRSSAQLVARKGSPLLPDAASLKGKTVGVQTGSIHETYAKKHWA--GQGVKIVSYANQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDT 235 + + + R +A D + + + R + I+ S + A+ + + Sbjct: 164 DNVYLDLMSGRINASLQDNTQAASSFIDTPRGQKFAFAGPAITDSSISSDVGIAVGKDNP 223 Query: 236 EWYNIVSWTHYAM 248 + ++ A+ Sbjct: 224 ALRDALNGAIKAI 236 >gi|183598314|ref|ZP_02959807.1| hypothetical protein PROSTU_01704 [Providencia stuartii ATCC 25827] gi|188020488|gb|EDU58528.1| hypothetical protein PROSTU_01704 [Providencia stuartii ATCC 25827] Length = 247 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 84/249 (33%), Gaps = 25/249 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + L T+ ++ ++ F N GFD Sbjct: 1 MKKIILAALLGAVTLSATAA-----------EKETIRFATEATYAPFEMFDKNNQIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + + + + +L+ ++ + L D T + + F Sbjct: 50 VDLANAMCEKM---NATCTFTHQSFDSLIPSLKFRRFEALMAGIDITP--DRQKQVDFTD 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K+ +SSV QL G I VQ GTT + + + K + ++ + Sbjct: 105 TYYPNSAEFIAIKE-KVSSVDQLKGKKIGVQNGTTHQKYIMEQHK----DMTTVPYDNYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR----PSEHVILPDIISKSPLAPAIIQGDTE 236 + R DA GD + P + L A+ +G+ E Sbjct: 160 SAILDLQNGRIDAVFGDTAVADEWLKAKGNENLAPVGEKVTDPQYFGIGLGIAVRKGNKE 219 Query: 237 WYNIVSWTH 245 + ++ Sbjct: 220 LLDKMNKAL 228 >gi|170770039|ref|ZP_02904492.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia albertii TW07627] gi|170121105|gb|EDS90036.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia albertii TW07627] Length = 243 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 80/252 (31%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN GFD Sbjct: 1 MKKLVLAALLASCAFGASAAE-------------KINFGVSATYPPFESMDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S ++F Sbjct: 48 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 103 PYYENSAVVIAKK-DAYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P V + L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNNALAAV 227 >gi|311280311|ref|YP_003942542.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter cloacae SCF1] gi|308749506|gb|ADO49258.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter cloacae SCF1] Length = 248 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 83/247 (33%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M VS+ L + F S L +T V F + + + GFD Sbjct: 1 MKSVLKVSLAALTLAFAVSSQAA---------NKQLVVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 51 VDLWAAIAKELKLDY---TMKPMDFSGIIPALQTKNVDVALAGITITDERKK--AIDFSD 105 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I SV L G + V++GT + DY KA+ F + Sbjct: 106 GYYKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + +R DA D + T + + + + A +G E Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGESLEAQQYGIAFPKGSDELRE 220 Query: 240 IVSWTHY 246 V+ Sbjct: 221 KVNGALK 227 >gi|206576658|ref|YP_002237705.1| cystine ABC transporter, periplasmic cystine-binding protein [Klebsiella pneumoniae 342] gi|288934565|ref|YP_003438624.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|290508765|ref|ZP_06548136.1| cystine transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|206565716|gb|ACI07492.1| cystine ABC transporter, periplasmic cystine-binding protein [Klebsiella pneumoniae 342] gi|288889274|gb|ADC57592.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|289778159|gb|EFD86156.1| cystine transport system substrate-binding protein [Klebsiella sp. 1_1_55] Length = 266 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 86/254 (33%), Gaps = 20/254 (7%) Query: 1 MYKDFF---VSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M + + ++ S ++L +K+RG L+ G+ F+ + Sbjct: 1 MKLALLGRQALMGAMAVVLMAGVSVKTFAAENLLNQVKERGTLRVGLEGTYPPFSFQGDD 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+V+F L+ + P +L SK+ID++ + R+ Sbjct: 61 GKLTGFEVEFANELAKHLGVKAD---LKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I + + L G + V GT E ++ + + Sbjct: 117 -KYDFSTPYTISGVQALVKKGNEGAIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGV 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + + + S+ A+ Sbjct: 172 DVRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTNNTLAVTGEAFSRQEAGVALR 229 Query: 232 QGDTEWYNIVSWTH 245 +G+ + + Sbjct: 230 KGNDDLLKAIDAAI 243 >gi|326797191|ref|YP_004315011.1| ABC-type transporter periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] gi|326547955|gb|ADZ93175.1| ABC-type transporter, periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] Length = 268 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 89/252 (35%), Gaps = 18/252 (7%) Query: 1 MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + + L +S ++ AS + DI G LK G + F +G + Sbjct: 1 MKFGYQKALTGLALASALVVSSQASAASAIDDILSSGELKVCFEAGYIPFEMKTKDGRYI 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D + ++ ++ I ALQ+K+ DI+ T R +L + Sbjct: 61 GFDIDIGKHMARSMDVKYVPIN---TAWDGIIPALQTKKCDIIMGGMTITASR--NLSVM 115 Query: 118 FRPITYFDGQGFIMHKKKG--ISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHP 173 F GQ ++ + I S L+ +I Q GTT Y Sbjct: 116 FSNSYISIGQTVVIKPELKGIIKSYKDLNKSEYTITSQIGTTGAEAARKYLPKA----TL 171 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +FE + + DA+ D+ + EH L + PL AI Q Sbjct: 172 DLFETSADGVLQVANGKADAFVYDLPFNALYASQHPDTVEH--LSTSFTYEPLGWAIRQD 229 Query: 234 DTEWYNIVSWTH 245 D + N ++ Sbjct: 230 DPNFLNFLNNYL 241 >gi|168777344|ref|ZP_02802351.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4196] gi|187767379|gb|EDU31223.1| cystine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4196] Length = 266 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 84/241 (34%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + LI + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 14 VMAVALIARMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 74 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + L G + V GT E ++ + + ++ Sbjct: 129 IQALVKKGNEGTIKTADDLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242 Query: 245 H 245 Sbjct: 243 I 243 >gi|161504004|ref|YP_001571116.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865351|gb|ABX21974.1| hypothetical protein SARI_02097 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 248 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 83/247 (33%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M VS+ L + F S L +T V F + + + GFD Sbjct: 1 MKSILKVSLAALTLAFAVSSHAAD---------KKLVVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + D P++ ALQ+K ID+ T R+ + F Sbjct: 51 IDLWAAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITDERKK--AIDFSD 105 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I SV L G + V++GT + DY KA+ F + Sbjct: 106 GYYKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + +R DA D + T + + + + A +G E Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKSVGESLEAQQYGIAFPKGSNELRE 220 Query: 240 IVSWTHY 246 V+ Sbjct: 221 KVNGALK 227 >gi|158316704|ref|YP_001509212.1| extracellular solute-binding protein [Frankia sp. EAN1pec] gi|158112109|gb|ABW14306.1| extracellular solute-binding protein family 3 [Frankia sp. EAN1pec] Length = 341 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 84/224 (37%), Gaps = 10/224 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + L I RG+L G+ F + G+++GFDVD + A+F +++ Sbjct: 96 DGPTLRKIADRGYLTVGVRPDTPPFGSRNPDTGEFEGFDVDLALLVGRALFGADGHVRFR 155 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + +R ++ +D+++ T + + + F Y + ++ + ++ Sbjct: 156 AVTGADRVALVRDGTLDLVAATLTITC--DRADEVDFSAPYYLTAKAVLVLEDAPYQGLA 213 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G +C AGTT+ + D + PI + A +A +A D + L Sbjct: 214 DLGGRRVCAAAGTTSLQQVVDAP----SRPIPIQLASPADCLVAMQAGTVEAIVNDEAVL 269 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + E I+ + A+ + + V+ Sbjct: 270 VGMVEQDP---ETRIVGVGAFDVAMGIAVAKDAPDLTRFVNGVL 310 >gi|148993047|ref|ZP_01822641.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP9-BS68] gi|168489558|ref|ZP_02713757.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP195] gi|147928248|gb|EDK79265.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP9-BS68] gi|183572012|gb|EDT92540.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP195] gi|332073701|gb|EGI84180.1| bacterial extracellular solute-binding s, 3 family protein [Streptococcus pneumoniae GA17570] Length = 271 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 82/254 (32%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L F + + + S + IK++G L + F V Sbjct: 4 KKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ L ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEILSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + + A A+ + Sbjct: 175 LTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234 Query: 233 GDTEWYNIVSWTHY 246 + +V Sbjct: 235 NSDDLKEVVDKVIQ 248 >gi|239502917|ref|ZP_04662227.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Acinetobacter baumannii AB900] gi|193077848|gb|ABO12725.2| ABC Lysine-arginine-ornithine transporter periplasmic ligand binding protein [Acinetobacter baumannii ATCC 17978] Length = 257 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 82/256 (32%), Gaps = 22/256 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L L + + K ++ G + F +G GFD Sbjct: 1 MKKIFVSTTLVLAAVATNVQA---------KDWKVIRFGTESSYAPFEYKTPDGKLTGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + + +K ++ + AL++K+ D + + T R + F Sbjct: 52 VDLGNAICAKL---KAKCVWVENSFDGMIPALKAKKFDGILSSMTVTDERAK--QILFSS 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K + + + L G + VQ GT E Y+ + + + Sbjct: 107 KIYNTPTRMVAKKGSPLLPTPTSLKGKRVGVQQGTIQETYAKTYWAPKGVS--VVPYPTQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + R DA D + L + + A + + D Sbjct: 165 DLIYQDMMSGRLDATLQDAIMVDGAFLKQPKGKNFSFAGGNVVDVKTLGVGAAIGLRKED 224 Query: 235 TEWYNIVSWTHYAMVT 250 + + A++ Sbjct: 225 ADLKANIDKALAAIIA 240 >gi|152969397|ref|YP_001334506.1| glutamine ABC transporter periplasmic protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893865|ref|YP_002918599.1| glutamine ABC transporter periplasmic protein [Klebsiella pneumoniae NTUH-K2044] gi|262041101|ref|ZP_06014319.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|150954246|gb|ABR76276.1| glutamine ABC transporter periplasmic-binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546181|dbj|BAH62532.1| glutamine ABC transport system periplasmic binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259041551|gb|EEW42604.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 248 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 81/247 (32%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F VS+ L + F S L +T V F + + + GFD Sbjct: 1 MKSVFKVSLAALTLAFAVSSHAANKT---------LVVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + D P++ ALQ+K ID+ T R+ + F Sbjct: 51 VDLWAAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITDERKK--AIDFSD 105 Query: 121 ITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G + I V L+G + V++GT + DY KA+ F + Sbjct: 106 GYYKSGLLVMVNANNNDIKDVKDLNGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + T + + + A +G E Sbjct: 162 DNAYMELGTGRADAVLHDTPNILYFIKTAGNGK-FKAVGESLEAQNYGIAFPKGSDELRE 220 Query: 240 IVSWTHY 246 V+ Sbjct: 221 KVNGALK 227 >gi|154175327|ref|YP_001409170.1| flagellar hook protein FlgE [Campylobacter curvus 525.92] gi|153793217|gb|ABS50425.1| flagellar hook protein FlgE [Campylobacter curvus 525.92] Length = 257 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 79/249 (31%), Gaps = 17/249 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+ F L L L + S L IKK G ++ ++ + G+D Sbjct: 1 MFLQKFAKFLTLASLAICVGAFGESSLEQIKKGGVIRIATEGTYSPYSFHDEKNELVGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A+++ + + +Q++ A + + D++ T R++ + Sbjct: 61 VDVAKAVAAKLGVE---VQFVEAPWDAMLAAFNAGKADVVFNQVSITPERKV--KYDYSE 115 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ K I L G + + T+ +A+ + A+ + + Sbjct: 116 PYTTAYGALIVRKDNDSIKKFEDLKGKNSA-HSATSNWAQVAEKYGAN-----VVTVDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL--APAIIQGDTEW 237 + A R DA D + + + P+ A +G Sbjct: 170 SKGVELIIARRADATINDTITFFDFVKQKPDAPIKIA---ATASEPIYSAALFHKGSDTL 226 Query: 238 YNIVSWTHY 246 V+ Sbjct: 227 VKAVNKALQ 235 >gi|157156974|ref|YP_001463224.1| cystine transporter subunit [Escherichia coli E24377A] gi|157079004|gb|ABV18712.1| cystine-binding periplasmic protein [Escherichia coli E24377A] gi|320198614|gb|EFW73214.1| Cystine ABC transporter, periplasmic cystine-binding protein FliY [Escherichia coli EC4100B] Length = 266 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 85/241 (35%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 14 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 74 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K + + + L G + V GT E ++ + + ++ Sbjct: 129 IQALVKKGNEGTLKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242 Query: 245 H 245 Sbjct: 243 I 243 >gi|323356728|ref|YP_004223124.1| amino acid ABC transporter periplasmic protein [Microbacterium testaceum StLB037] gi|323273099|dbj|BAJ73244.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Microbacterium testaceum StLB037] Length = 300 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 80/225 (35%), Gaps = 10/225 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + + + G+ G +G+ GFDV+ + +++++ D KI+Y Sbjct: 56 SPTYDRMVAADKVVVGVKEDQPGLGFKDPISGERGGFDVEISQWIAASLGFDADKIEYKT 115 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVS 141 + + R L + ID T R+ + F GQG ++ I + Sbjct: 116 IPSANREQELVNGNIDYYVGTYSITDKRKA--QIDFAGPYLITGQGLLVAADNEDIKGPN 173 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G +C G+T + D + + ++ + RA DA T D + L Sbjct: 174 DLAGKIVCSVTGSTPLQRIRDEY----SPGDTVEYDTYTQCLEQLRAGSVDAVTTDQAIL 229 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 P I D S+ + +GDT + ++ Sbjct: 230 AGYVAQ--EPEAFKIAGDTFSEERYGVGLPKGDTVLKDHINTLFN 272 >gi|306840465|ref|ZP_07473224.1| extracellular solute-binding protein [Brucella sp. BO2] gi|306289480|gb|EFM60698.1| extracellular solute-binding protein [Brucella sp. BO2] Length = 268 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 84/254 (33%), Gaps = 15/254 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +++ + + A+ + + ++ L G F +K +G GFD Sbjct: 1 MRVLKRIAMATSVAALAITIGNMAAGVANAEEPLKLTIGTEGAYPPFNFIKPDGSLSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RAL + +K +++ ALQS + D + T R+ + F Sbjct: 61 VDIARALCDEM---KAKCEFVTQEWDGAIPALQSGKFDAFIASMSITDERKK--QVDFTN 115 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G K I + L+G +I VQ TT A+Y + + Sbjct: 116 KYYNTPPGIAAPKDTDIKGVTKEDLAGKTIGVQGSTTH----ANYSEKTYTDSTIKSYPT 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP----AIIQGD 234 EE R DA D L + D ++ P AI +G Sbjct: 172 AEEYRLDLANGRLDAVNDDSVTLAEWLKSPDGACCKMVGTFPPVTEIHGPGAGIAIKKGR 231 Query: 235 TEWYNIVSWTHYAM 248 E + A+ Sbjct: 232 PELVAKFNAAIKAI 245 >gi|254253412|ref|ZP_04946730.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] gi|124896021|gb|EAY69901.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] Length = 266 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 14/232 (6%) Query: 17 FTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLGVKT 78 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 Q++P LQ+ + D++ T R+ L F + I K Sbjct: 79 ---QFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKE--ALDFSEPYTYSAAQLIQRKDD 133 Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 S+ G + V GT D + E A R +A Sbjct: 134 KRDFKSLEDFKGKKLGVTLGTNY-----DQMARSVPGIEVQTYPGAPEKLRDLAAGRIEA 188 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D L + T++ P + + + +A +G+ ++ ++ Sbjct: 189 TLDDRLMLPYMIKTSNLPLRAGAVLNGGKQE-MAIPFRKGNPKFEKAINDAL 239 >gi|293393701|ref|ZP_06638010.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] gi|291423823|gb|EFE97043.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] Length = 279 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 47/224 (20%), Positives = 84/224 (37%), Gaps = 13/224 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L DIK+ G ++ + F + + G+DVD A+ A+ ++ Sbjct: 25 DKLDDIKQAGVVRIAVFDSNPPFGYIDPQSKKLVGYDVDIADAIGKALGVK---VELRAT 81 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 N R L +K++D+++ N T R + F + GQ FI K + + + Sbjct: 82 NPANRIPLLAAKKVDLIAANFTITEQRAK--EVNFSVPYFATGQKFIARKG-VLKTPEDI 138 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 I GT E+TL +++ I ++ A R A T D + L Sbjct: 139 KTLRIGADKGTVQEITLREHYPTAK----VISYDDTPLAFVALRNGNVQAITQDDAKLVG 194 Query: 204 LKLTN--DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L + ++ I P I+K I +G+ ++ T Sbjct: 195 LLGNLTPAQKADFEISPFSITKEYQGIGIPKGEERLTATINDTL 238 >gi|304395814|ref|ZP_07377697.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. aB] gi|304357108|gb|EFM21472.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. aB] Length = 248 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 84/249 (33%), Gaps = 20/249 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + + L F+ ST A L +T V F + + + GFDVD Sbjct: 2 KSLLKVSVAALALAFSLSSTAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ++ +D+ T R+ + F Sbjct: 53 LWDAIAKELKLDY---TLKPMDFSGIIPALQTRNVDLALAGITITEERKK--AIEFSDGY 107 Query: 123 YFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ I +S L+G + V++GT + + K+ F ++ Sbjct: 108 YKSGLQVMVRNNENDIKGISDLNGKVVAVKSGTGSVEYAKAHIKSK----DLRQFPNIDS 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + D I A +G + V Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIHTAGKGR-FKAVGDSIEAQQYGIAFPKGSDDLREKV 222 Query: 242 SWTHYAMVT 250 + + Sbjct: 223 NGALKTLKE 231 >gi|262047081|ref|ZP_06020040.1| glutamine-binding protein [Lactobacillus crispatus MV-3A-US] gi|312984301|ref|ZP_07791645.1| glutamine-binding protein [Lactobacillus crispatus CTV-05] gi|260572658|gb|EEX29219.1| glutamine-binding protein [Lactobacillus crispatus MV-3A-US] gi|310894319|gb|EFQ43397.1| glutamine-binding protein [Lactobacillus crispatus CTV-05] Length = 272 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 85/226 (37%), Gaps = 10/226 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + ++ +K+ + G+ F G +GF++D +AL+ + +K + Sbjct: 27 ASNNVYQKVKESKTIVWGVRADTRLFGLTNIKTGHIEGFEIDLAKALTKQMLGKDAKTDF 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + A R L++ +D + T R + F + G ++ I +V Sbjct: 87 VTTTANTRIPLLKNGNVDAVLATMTITPERAK--QVTFSKPYFPAGSSLLVPNNSKIKNV 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G ++ GTT + Y + ++ + +A +A++ A T D Sbjct: 145 KDLEGKTVLAVKGTTAVDDVHKYAPKA----RILQYDDYGQAMSALKANQGVALTTDNGL 200 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 L + + P + ++ + S +P A+ +G + + + Sbjct: 201 LAGIAQ--ENPG-YKLVGGVYSNAPYGIAVNKGQKQMADHIDQALN 243 >gi|206558740|ref|YP_002229500.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] gi|198034777|emb|CAR50644.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] Length = 266 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 14/232 (6%) Query: 17 FTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLGVKT 78 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 Q++P LQ+ + D++ T R+ L F + I K Sbjct: 79 ---QFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKE--ALDFSEPYTYSAAQLIQRKDD 133 Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 S+ G + V GT D + E A R +A Sbjct: 134 TRNFKSLDDFKGKKLGVTLGTNY-----DQMARTVPGIEVQTYPGAPEKLRDLAAGRIEA 188 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D L + T++ P + + + +A +G+ ++ ++ Sbjct: 189 TLDDRLMLPYMIKTSNLPLRAGAVLNGGKQE-MAIPFRKGNPKFEKAINDAL 239 >gi|117617755|ref|YP_856221.1| arginine and ornithine binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559162|gb|ABK36110.1| arginine and ornithine binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 257 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 84/254 (33%), Gaps = 24/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + + + K+ ++ G+ F+ + +G+ KGFD Sbjct: 1 MNKLMLATAIVTALSSGSLMA---------KEWKEVRIGVEGAYPPFSWTEPSGEVKGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + K + + AL S++ D + D T R+ + F Sbjct: 52 IDIANALCEEM---KVKCTLIKQDWDGIIPALLSRKYDAIIATMDITEERKK--KVDFTQ 106 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F K I +SG ++ VQ T+ + + D F + Sbjct: 107 KYQHIPARFAAKKGTEIKLDKEFMSGKTVAVQRATSMDTYITDNFP----NATIKRYGTA 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E ++ R D D +A+ L + + ++ A+ + D Sbjct: 163 DEAYLDLKSGRVDYVMADSAAISDGLLKKEGGDAFEFIGPKLTDPKWFGEGAGIAVRKAD 222 Query: 235 TEWYNIVSWTHYAM 248 + + A+ Sbjct: 223 KDLKEKFNAAILAL 236 >gi|312973430|ref|ZP_07787602.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli 1827-70] gi|310332025|gb|EFP99260.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli 1827-70] Length = 260 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 95/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L++ T+ S+ A++ ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSIL--ALSLLVGLSTAASSYAALPE------TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E + +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + R DA D A L + + + + D Sbjct: 166 DLVYSDLATGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257 >gi|210623566|ref|ZP_03293892.1| hypothetical protein CLOHIR_01842 [Clostridium hiranonis DSM 13275] gi|210153436|gb|EEA84442.1| hypothetical protein CLOHIR_01842 [Clostridium hiranonis DSM 13275] Length = 279 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 96/287 (33%), Gaps = 28/287 (9%) Query: 1 MYKDFFVSILCLIILFFTSFS----------TNASILGDIKKRGFLKCGINTGLVGFAE- 49 M K + + ++ L + S + + L +K+ G L GI F Sbjct: 3 MKKLISLGMAMVLSLGLVACSGGEDKEASTSSTSDKLEQVKESGKLVVGIYPDYPPFEFH 62 Query: 50 --VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + + G D D A++ + + + + AL++ +IDI+ T Sbjct: 63 STANGSDEIAGVDKDLGEAIAKELGVEAE---FKEITFDGLIGALKADKIDIILSGMSPT 119 Query: 108 LLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 R+ + F + Y + ++ I SV +L I VQ G+ E + Sbjct: 120 PERDK--SVDFTDLYYTGKNIVAVKEGEEDKIKSVDELKNLKIAVQKGSIQEAYVT---- 173 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV-ILPDIISKS 224 E + ++ + DA + + + LP+ S+ Sbjct: 174 KLGCT-SIKSLEAIPDVMTELKNGNVDAVVVNDTVGILNMQEMGGLVQANLELPNGDSEE 232 Query: 225 PLAPAIIQGDTE--WYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 +A AI Q D + V+ + E ++N + +K+ Sbjct: 233 GMAAAIKQDDNNKAFLEAVNKAVNNFKSNEFEKSLKENTDLATKENK 279 >gi|251791413|ref|YP_003006134.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] gi|247540034|gb|ACT08655.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] Length = 256 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 79/246 (32%), Gaps = 14/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++L +L + + L IK G +K G + A+G GFD Sbjct: 1 MKKS-RLALLTGALLVTSVLAHAQDDLSAIKAAGVIKFGTEGTYAPYTYHDASGKLVGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RA++ + ++ + +K+ D + T R+ F Sbjct: 60 VDVGRAVAEKLGVKAE---FVEGRWDGLIAGVDAKRYDAVINQVGVTKERQA--KYDFSN 114 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ I S + L G Q+ T+ LA + A + + Sbjct: 115 PYIDAKSVLIVRSDNTSIKSFNDLKGHKSA-QSLTSNYSKLATSYGA-----EIVPTDGF 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R +A D + K ++ S P A + + + + Sbjct: 169 NQSLELVLSGRAEATLNDNLSFLDFKKHKPDAKV-KVVATAESGDPSAILVRKNQPQLVD 227 Query: 240 IVSWTH 245 ++ Sbjct: 228 ALNKAL 233 >gi|148989515|ref|ZP_01820874.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP6-BS73] gi|168483981|ref|ZP_02708933.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC1873-00] gi|147925058|gb|EDK76139.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP6-BS73] gi|172042731|gb|EDT50777.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC1873-00] Length = 271 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L F + + + S + IK++G L + F V Sbjct: 4 KKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTNLESANIAAQKGTVPESMVKEQLPK----VQ 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + + A A+ + Sbjct: 175 LTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234 Query: 233 GDTEWYNIVSWTHY 246 + +V Sbjct: 235 NSDDLKEVVDKVIQ 248 >gi|148985652|ref|ZP_01818806.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP3-BS71] gi|147922133|gb|EDK73255.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP3-BS71] gi|301800260|emb|CBW32880.1| putative extracellular amino acid-binding protein [Streptococcus pneumoniae OXC141] Length = 271 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L F + + + S + IK++G L + F V Sbjct: 4 KKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTNLKSANIAAQKGTVPESMVKEQLPK----VQ 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + + A A+ + Sbjct: 175 LTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234 Query: 233 GDTEWYNIVSWTHY 246 + +V Sbjct: 235 NSDDLKEVVDKVIQ 248 >gi|15901248|ref|NP_345852.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae TIGR4] gi|111658588|ref|ZP_01409245.1| hypothetical protein SpneT_02000263 [Streptococcus pneumoniae TIGR4] gi|14972882|gb|AAK75492.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae TIGR4] Length = 271 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L F + + + S + IK++G L + F V Sbjct: 4 KKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPK----VQ 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + + A A+ + Sbjct: 175 LTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234 Query: 233 GDTEWYNIVSWTHY 246 + +V Sbjct: 235 NSDDLKEVVDKVVQ 248 >gi|328885478|emb|CCA58717.1| glutamate binding periplasmic protein [Streptomyces venezuelae ATCC 10712] Length = 273 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 70/212 (33%), Gaps = 6/212 (2%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + GI G +G + GFDVD + ++ + KI + + ER +++ Sbjct: 35 KITVGIKFDQPGLGLKTPDGTYAGFDVDVAKYVAKELGFAEDKINWKQAPSAERENLIKN 94 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAG 153 + + + R + F + Q ++ I+ V L+ +C G Sbjct: 95 GDVKFVVASYSINEKR--LKEVDFAGPYFVTHQDLLVRADDSSITKVEDLNSKKLCSVTG 152 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T+ + + K E R DA T D S L + + Sbjct: 153 STSAQNVKEKLA---PKADLQQLGGYSECLTGLENKRVDALTTDASILAGYASQKEHQGK 209 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + +S I +GD+E ++ Sbjct: 210 FKLAGLSLSNENYGIGIKKGDSELKGKINKAL 241 >gi|238019430|ref|ZP_04599856.1| hypothetical protein VEIDISOL_01299 [Veillonella dispar ATCC 17748] gi|237864129|gb|EEP65419.1| hypothetical protein VEIDISOL_01299 [Veillonella dispar ATCC 17748] Length = 268 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 78/255 (30%), Gaps = 17/255 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDV 61 K + L++ +S L G N V F + GFD+ Sbjct: 7 KKLIIGGCMLVMAGTVIGGCGSSTQTT---SNKLIVGTNATFVPFEFKDEKTQDYTGFDI 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D RA+ I D ++ + AL + ID+ + T R S + F Sbjct: 64 DLIRAIGKRINKD---VELKNVAFDALIPALNTHDIDVAASGMTITKAR--SEKVLFSSP 118 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y + + I+S+ L G I Q GTT F+ E Sbjct: 119 YYENALAVVYKDGANITSLDDLKGKKIAAQLGTTGADLAHKI-----EGTTVKEFDHSNE 173 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEWYNI 240 + DA D+ A + P +H + +K L AI + + + Sbjct: 174 ALLELQNGGADATVIDLP--VAQFYSTKHPDQHIKFMAYPNTKEYLGLAINKDNKDLQEQ 231 Query: 241 VSWTHYAMVTAEELG 255 ++ M E Sbjct: 232 INKAIADMKADGEFN 246 >gi|171316557|ref|ZP_02905773.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171098285|gb|EDT43091.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 266 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 14/232 (6%) Query: 17 FTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLGVKT 78 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 Q++P LQ+ + D++ T R+ L F + I K Sbjct: 79 ---QFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEV--LDFSQPYTYSAAQLIQRKDD 133 Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 S+ G + V GT D + E A R +A Sbjct: 134 TRNFKSLEDFKGKKLGVTLGTNY-----DQMARSVPGIEVQTYPGAPEKLRDLAAGRIEA 188 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D L + T++ P + + + +A +G+ ++ ++ Sbjct: 189 TLDDRLMLPYMIKTSNLPLRSGAVLNGGKQE-MAIPFRKGNPKFEKAINDAL 239 >gi|307728987|ref|YP_003906211.1| cationic amino acid ABC transporter periplasmic-binding protein [Burkholderia sp. CCGE1003] gi|307583522|gb|ADN56920.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. CCGE1003] Length = 258 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 87/251 (34%), Gaps = 24/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L ++ + + K+ ++ G++ F A+G GFD Sbjct: 1 MKK--LALCVALAVMATGAMA---------KEWKTVRIGVDASYPPFESKAASGQVVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL + + K ++ + AL+ K+ D + + T R + F Sbjct: 50 VDLTKALCARM---NVKCVWVEQDFDGIIPALKGKKFDAIVSSLTVTDKR--REQIDFSD 104 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I + + L G + V+ GTT E Y++ + ++ Sbjct: 105 KLFDAPARMIAKAGSPLLPTAESLKGKRVGVEQGTTQEAYAKAYWEPKG--VTVVPYQNQ 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISK----SPLAPAIIQGD 234 +++ A + R DA D A L R P++ A + + D Sbjct: 163 DQVYADLTSGRLDAALQDEIQADAGFLKTPRGKGFAWAGPEVKDAKTIGEGTAIGLRKED 222 Query: 235 TEWYNIVSWTH 245 T+ + + Sbjct: 223 TDLKTMFNKAL 233 >gi|222094149|ref|YP_002528206.1| amino acid ABC transporter , amino acid-binding protein [Bacillus cereus Q1] gi|221238204|gb|ACM10914.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus Q1] Length = 264 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESATTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + P+ I + L++K+ D++ + T R + F Sbjct: 61 FDVELGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KYTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|170724142|ref|YP_001751830.1| cystine transporter subunit [Pseudomonas putida W619] gi|169762145|gb|ACA75461.1| extracellular solute-binding protein family 3 [Pseudomonas putida W619] Length = 264 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 80/246 (32%), Gaps = 13/246 (5%) Query: 3 KDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K S+ L+ S + L I+++G + G+ F+ NG GF+V Sbjct: 6 KPLLNASLAILLGTGLFSQAFAGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKLAGFEV 65 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 +F L+ + + P AL+SK++D++ + R+ + Sbjct: 66 EFSELLAKELGVKA---KIQPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSEPYT 122 Query: 122 TYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + K + I + L+G + V GT E + +E Sbjct: 123 VSGIQALILKKKAEQLNIKTAQDLAGKKVGVGLGTNYEQWVKQDVP----NAEVRTYEDD 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R R DA D A + + D S+ A+ +G+ E Sbjct: 179 PSKFADLRNGRIDAILIDRLAALEYAQKAK---DTELAGDAFSRLESGVALRKGEPELLA 235 Query: 240 IVSWTH 245 + Sbjct: 236 AIDKAI 241 >gi|161523531|ref|YP_001578543.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189351696|ref|YP_001947324.1| polar amino acid transporter substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221201670|ref|ZP_03574708.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD2M] gi|221207255|ref|ZP_03580265.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD2] gi|221213394|ref|ZP_03586369.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD1] gi|160340960|gb|ABX14046.1| extracellular solute-binding protein family 3 [Burkholderia multivorans ATCC 17616] gi|189335718|dbj|BAG44788.1| polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221166846|gb|EED99317.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD1] gi|221172843|gb|EEE05280.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD2] gi|221178486|gb|EEE10895.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD2M] Length = 266 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 14/232 (6%) Query: 17 FTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLGVKT 78 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 Q++P LQ+ + D++ T R+ L F + I K Sbjct: 79 ---QFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKE--ALDFSEPYTYSAAQLIQRKDD 133 Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 S+ G + V GT D + E A R +A Sbjct: 134 KRDFKSLEDFKGKKLGVTLGTNY-----DQMARSVPGIEVQTYPGAPEKLRDLAAGRIEA 188 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D L + T++ P + + + +A +G+ ++ ++ Sbjct: 189 TLDDRLMLPYMIKTSNLPLRAGAVLNGGKQE-MAIPFRKGNPKFEKAINDAL 239 >gi|117621407|ref|YP_857215.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562814|gb|ABK39762.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 257 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 76/246 (30%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++ + L + S L +I++ G +K G F +G GFD Sbjct: 1 MKKRHSLFLMAALPLALMTSVQAQSSLAEIQRAGVIKIGTEGAYPPFTYHDKSGKLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ ++S + P Q++ + +K+ D++ T R F Sbjct: 61 VEIGELIASGLGVKP---QFVEGKWDGLIAGVDAKRYDLVLNEVAITPER--LKKYDFSD 115 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++H I S + L G Q+ T+ LA A + E Sbjct: 116 PYITSKAVIVVHSDNHSIKSFADLKGKKSS-QSLTSNFAQLAKASGA-----EVVATEGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + K V + + +G E Sbjct: 170 NQSLELVLTGRVDATLNDSLSFLDFKKQKPDAKLKVAATEAKGDQS-GALLAKGQPELLA 228 Query: 240 IVSWTH 245 ++ Sbjct: 229 AINQAL 234 >gi|325685933|gb|EGD27997.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 289 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 79/229 (34%), Gaps = 8/229 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK 77 S S K+ + G+ F G +GF++D A++ I SK Sbjct: 33 CSSKQESSYARAKQSKQITWGVRPDTKLFGLTNIKTGKIEGFEIDLATAITKQILGPKSK 92 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + P+ K R L + +D + T R + F + + + I+ K I Sbjct: 93 AVFRPITEKTRITLLHNGSLDAVISTMTITKER--MKVIDFSDVYFNANESMIVKKSSKI 150 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S++ L+ + V A T+ +A+ K F+ A +A + D D Sbjct: 151 RSIADLNKKGVVVIAIKGTD--VANQVAKLAPKARVKQFDDYGSAFNALKAGQGDVMIDD 208 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 L L E + +++ P + +G TE ++ Sbjct: 209 NGILAGLIADTP---EFTLTKASLAEEPYGIGVEKGQTEMRQAINLALK 254 >gi|194433178|ref|ZP_03065460.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Shigella dysenteriae 1012] gi|194418675|gb|EDX34762.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Shigella dysenteriae 1012] gi|332088934|gb|EGI94046.1| glutamine-binding periplasmic protein [Shigella boydii 5216-82] gi|332091034|gb|EGI96124.1| glutamine-binding periplasmic protein [Shigella dysenteriae 155-74] Length = 248 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 82/245 (33%), Gaps = 20/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 53 LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 108 YKSDLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + D + A +G E + V Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKGSDELRDKV 222 Query: 242 SWTHY 246 + Sbjct: 223 NGALK 227 >gi|196040156|ref|ZP_03107458.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus NVH0597-99] gi|229089485|ref|ZP_04220755.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus Rock3-42] gi|196029011|gb|EDX67616.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus NVH0597-99] gi|228693871|gb|EEL47564.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus Rock3-42] Length = 264 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + P+ I + L++K+ D++ + T R + F Sbjct: 61 FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKNLVA------KHTNQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|320183306|gb|EFW58161.1| Glutamine ABC transporter, periplasmic glutamine-binding protein [Shigella flexneri CDC 796-83] gi|332097421|gb|EGJ02401.1| glutamine-binding periplasmic protein [Shigella boydii 3594-74] Length = 248 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 85/247 (34%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M VS+ L ++F S L +T V F + + + GFD Sbjct: 1 MKSVLKVSLAALTLVFAVSSHAAD---------KKLVVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 51 VDLWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSD 105 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ + SV L G + V++GT + DY KA+ F + Sbjct: 106 GYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + +R DA D + T + + D + A +G E + Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKGSDELRD 220 Query: 240 IVSWTHY 246 V+ Sbjct: 221 KVNGALK 227 >gi|317048576|ref|YP_004116224.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316950193|gb|ADU69668.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 266 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 86/248 (34%), Gaps = 15/248 (6%) Query: 2 YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + ++ + ++ + ++L +K+RG L G+ F+ NG GF Sbjct: 7 RRQLVMGVMAVALVAGFNVKTFAAENLLNKVKERGTLLVGLEGTYPPFSFQDENGKLTGF 66 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +V+F + L+ + P +L SK+ID++ + R+ F Sbjct: 67 EVEFAQELAQHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFS 121 Query: 120 PITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G + KK I+ LSG + V G+ E L D K ++ Sbjct: 122 TPYTISGVQALTLKKNAGSINKPEDLSGKKVGVGLGSNYEQWLRDNVK----GVDIRTYD 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R+ R DA D L AL L + S+ A+ +G+ + Sbjct: 178 DDPTKYQDLRSGRLDAILVDR--LAALDLVKKTGDTMAVAGPAFSRLESGVALRKGNDDL 235 Query: 238 YNIVSWTH 245 + Sbjct: 236 LKAIDAAI 243 >gi|149002780|ref|ZP_01827706.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS69] gi|237651184|ref|ZP_04525436.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CCRI 1974] gi|237821264|ref|ZP_04597109.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CCRI 1974M2] gi|147759074|gb|EDK66068.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS69] Length = 271 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L F + + + S + IK++G L + F V Sbjct: 4 KKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + + A A+ + Sbjct: 175 LTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234 Query: 233 GDTEWYNIVSWTHY 246 + +V Sbjct: 235 NSDDLKEVVDKVIQ 248 >gi|42779548|ref|NP_976795.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus ATCC 10987] gi|42735464|gb|AAS39403.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus ATCC 10987] Length = 264 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESATTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + P+ I + L++K+ D++ + T R + F Sbjct: 61 FDVELGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KYTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKNDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|107024193|ref|YP_622520.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116688482|ref|YP_834105.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105894382|gb|ABF77547.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116646571|gb|ABK07212.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 266 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 14/232 (6%) Query: 17 FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHADDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLGVKT 78 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 Q++P LQ+ + D++ T R+ L F + I K Sbjct: 79 ---QFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKE--ALDFSEPYTYSAAQLIQRKDD 133 Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 S+ G + V GT D + E A R +A Sbjct: 134 TRNFKSLDDFKGKKLGVTLGTNY-----DQMARTVPGIEVQTYPGAPEKLRDLAAGRIEA 188 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D L + T++ P + + + +A +G+ ++ ++ Sbjct: 189 TLDDRLMLPYMIKTSNLPLRAGAVLNGGKQE-MAIPFRKGNPKFEKAINDAL 239 >gi|324007275|gb|EGB76494.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 57-2] Length = 266 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 83/241 (34%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 14 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 74 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + L + V GT E ++ + + ++ Sbjct: 129 IQALVKKGNEGTIKTADDLKDKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242 Query: 245 H 245 Sbjct: 243 I 243 >gi|307149990|ref|YP_003885374.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] gi|306980218|gb|ADN12099.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] Length = 296 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 98/250 (39%), Gaps = 12/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K ++++ L + A L + + G L G T LV A V + G+ Sbjct: 1 MIKTLTLALISLAFTLGVPLKSGAETVLERVARTGTLVVGTATDLVPLAYVNDKNELVGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D+ L + + +Q++ + + L S+++DI+ N +T R+ + Sbjct: 61 SIDYLNFLKNQLQTQLGRDVTLQFVEVTPTDAIPKLISQEVDIIC-NAAFTWERDKF--V 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G ++ + SV L+G I + + K K + Sbjct: 118 DFSVSMGLGGTRLLVKGGSQLGSVDSLAGKRIAAIRNSIPAQVI----KVLQPKAIIVNV 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDT 235 E ++E + + + D + L + T + + ++P ++ +A + + ++ Sbjct: 174 ESMQEGFDSVKQGKVDGFAASGIVLDGYRQTVSDKNAYQVVPQKPYNREGIACMVPENNS 233 Query: 236 EWYNIVSWTH 245 ++ ++V+++ Sbjct: 234 KFLDVVNFSV 243 >gi|227540882|ref|ZP_03970931.1| 3 family extracellular solute-binding protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227183142|gb|EEI64114.1| 3 family extracellular solute-binding protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 336 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 97/232 (41%), Gaps = 13/232 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + ++ DI KRG++ G+ + A G+ GF++D ++ IF DPSK+ + Sbjct: 77 ASELIPDIYKRGYIIVGVEQSQNLMSYRDLATGELIGFEIDLAHEIARDIFGDPSKVAFR 136 Query: 82 PLNAKERFLALQ---SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++A R AL ++++D++ R T R + + F + GF+ K ++ Sbjct: 137 YVDAANREQALSAPPTERVDVVIRAMTMTKGR--ADNVDFSAPYFSTSAGFLTDKDSPVT 194 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 +V L+ A++CV G+ + +A I + A + + DA D Sbjct: 195 TVDDLNKATVCVAQGSINQYRVARIAP----GATLITTLSWSDCLMALQQQQVDAVFSDT 250 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + L + + S VI + + I QG+ V+ T ++ Sbjct: 251 ALLAGMAAQDAYTSMTVISKE---RDYYGIGIKQGNDNLTRQVNKTIERIIA 299 >gi|163747482|ref|ZP_02154833.1| putative ABC transporter periplasmic amino acid-binding protein [Oceanibulbus indolifex HEL-45] gi|161379238|gb|EDQ03656.1| putative ABC transporter periplasmic amino acid-binding protein [Oceanibulbus indolifex HEL-45] Length = 268 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 73/200 (36%), Gaps = 8/200 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F L+ + A L DI G L+C + GFD Sbjct: 1 MK--FTQLAGSLVAATVIGSAAQADKLDDIISSGTLRCAVVLDFPPMGSRDDTNTPVGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+C L++A+ D ++ +R AL S + D+ +T TL R ++G F Sbjct: 59 VDYCNDLAAALGVDAEIVE---TPFPDRIPALVSGRADVGVASTSDTLERAKTVG--FSV 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + + G+ S L G ++ AGT + L + A + ++ Sbjct: 114 PYFAFTNVVLTREDAGVDSFESLKGKTVGSVAGTFEAIALEEQIDAWD-DGSFRSYQSQA 172 Query: 181 EIDAAYRAHRCDAYTGDISA 200 ++ + + DA + Sbjct: 173 DVFLSLSQGQIDATVVTSTV 192 >gi|149007336|ref|ZP_01830994.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP18-BS74] gi|149011634|ref|ZP_01832830.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP19-BS75] gi|168493297|ref|ZP_02717440.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus pneumoniae CDC3059-06] gi|307127037|ref|YP_003879068.1| glutamine ABC transporter glutamine-binding protein [Streptococcus pneumoniae 670-6B] gi|147761140|gb|EDK68108.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP18-BS74] gi|147764065|gb|EDK70997.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP19-BS75] gi|183576732|gb|EDT97260.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus pneumoniae CDC3059-06] gi|306484099|gb|ADM90968.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus pneumoniae 670-6B] gi|332074716|gb|EGI85190.1| bacterial extracellular solute-binding s, 3 family protein [Streptococcus pneumoniae GA17545] Length = 271 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L F + + + S + IK++G L + F V Sbjct: 4 KKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + + A A+ + Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234 Query: 233 GDTEWYNIVSWTHY 246 + +V Sbjct: 235 NSDDLKEVVDKVIQ 248 >gi|301050725|ref|ZP_07197584.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 185-1] gi|300297593|gb|EFJ53978.1| bacterial extracellular solute-binding protein, family 3 [Escherichia coli MS 185-1] Length = 266 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 83/241 (34%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+RG L G+ F +G GF+V+F + Sbjct: 14 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFNFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 74 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + L G + V GT E ++ + + ++ Sbjct: 129 IQALVKKGNEGTIKTADDLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242 Query: 245 H 245 Sbjct: 243 I 243 >gi|255326959|ref|ZP_05368035.1| glutamate binding protein [Rothia mucilaginosa ATCC 25296] gi|255296176|gb|EET75517.1| glutamate binding protein [Rothia mucilaginosa ATCC 25296] Length = 276 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 83/239 (34%), Gaps = 16/239 (6%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 + S ++ ++ GI G N + GFDV+ R ++ + Sbjct: 20 TGVLAGCSSADSD--------HKIRIGIKVDQPGLGYQDGN-TYTGFDVEVARYVAGKLG 70 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +I+++ A R L + Q+D++ + R+ + + F Y GQ ++ Sbjct: 71 YSEEQIEFVESPAANRENMLNTGQVDMIFATYSISESRKKT--VDFAGPYYTAGQDLLVR 128 Query: 133 KKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 I L+G ++C G+T+ + D F + + + + A Sbjct: 129 ADNTDIKGPDDLNGKNLCSVTGSTSAQKVQDKFAKN---VNLVKQNSYSDCVVALNGGVV 185 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 DA T D L L T + ++ + + +G + V+ MV Sbjct: 186 DAVTTDDITLAGLAATKANKGKLKVVGSPFTTERYGVGLPKGTDKC-EAVNNAINEMVA 243 >gi|87122495|ref|ZP_01078375.1| putative amino acid ABC transporter, periplasmic protein [Marinomonas sp. MED121] gi|86162288|gb|EAQ63573.1| putative amino acid ABC transporter, periplasmic protein [Marinomonas sp. MED121] Length = 263 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 97/256 (37%), Gaps = 11/256 (4%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + VS +II F+ F+ A +L DI+ R ++ + F + + +G Sbjct: 1 MKRFIKLVSKAMIIIAGFSVFNATADVLQDIQGRKLIRIAVPQDFPPFGSIGTDLKPQGI 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD ++ + I+ +P+ + R LQ+K++D++ + RE + F Sbjct: 61 DVDMANYIADEMGVK---IEIVPVTSANRIPYLQTKKVDLVISSLGKNPEREK--AIDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G K ++ + L+G + V G+ +L L + + FE Sbjct: 116 TPYAPFFLGVFGSKDVEVTKIEDLAGKIVGVTRGSVEDLELEKHAPK---SVNVRRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AY + + + L A ++ +P ++ SP + +G+ Sbjct: 173 NTTLTAYLSGQVNLIATGN--LVATEIAKRQPQRAPESKFMLKDSPCYIGMAEGEVALQA 230 Query: 240 IVSWTHYAMVTAEELG 255 V+ + + +L Sbjct: 231 KVNELINKALASGKLN 246 >gi|301026982|ref|ZP_07190370.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 196-1] gi|299879475|gb|EFI87686.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 196-1] Length = 248 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 82/245 (33%), Gaps = 20/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 53 LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + D + A + E + V Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKDSDELRDKV 222 Query: 242 SWTHY 246 + Sbjct: 223 NGALK 227 >gi|323525229|ref|YP_004227382.1| cationic amino acid ABC transporter periplasmic-binding protein [Burkholderia sp. CCGE1001] gi|323382231|gb|ADX54322.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. CCGE1001] Length = 258 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 86/251 (34%), Gaps = 24/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L ++ + + K+ ++ G++ F A+G GFD Sbjct: 1 MKK--LALCVALAVMATGAMA---------KEWKTVRIGVDASYPPFESKAASGQVVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RAL + + K ++ + AL+ K+ D + + T R + F Sbjct: 50 VDLTRALCARM---NVKCVWVEQDFDGIIPALKGKKFDAIVSSLTVTDKR--REQIDFSD 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I + + L G + V+ GTT E Y++ + ++ Sbjct: 105 KLFDAPARMIARTGSPLLPTADSLKGKRVGVEQGTTQEAYAKAYWEPKG--VTVVPYQNQ 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISK----SPLAPAIIQGD 234 +++ A + R DA D A L R P++ A + + D Sbjct: 163 DQVYADLTSGRLDAALQDEIQADAGFLKTPRGKGFAWAGPEVKDPKTIGEGTAIGLRKDD 222 Query: 235 TEWYNIVSWTH 245 E + + Sbjct: 223 AELKAMFNKAL 233 >gi|226360987|ref|YP_002778765.1| cystine ABC transporter cystine-binding protein [Rhodococcus opacus B4] gi|226239472|dbj|BAH49820.1| cystine ABC transporter cystine-binding protein [Rhodococcus opacus B4] Length = 262 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 81/237 (34%), Gaps = 16/237 (6%) Query: 1 MYKDF---FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + +++L + L S + ++ +++ G LK G F+ +G Sbjct: 1 MRRTLPAALIAVLTALSLAGCGNSDSGPVIDQVRESGVLKVGTEGTYTPFSYQGPDGQLT 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+DVD RA+ + +++ F L++K+ D+++ R + Sbjct: 61 GYDVDVIRAVGDKLG---VSVEFTQTPWDSIFAGLEAKRYDLVANQVTVNDER--TQKYD 115 Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + + I+S++ L+G + Q+ T+ +A A+ Sbjct: 116 LSTPYTYSEGVIVTRADDNAITSLADLNGKTTA-QSATSNWAQVARDAGAN-----VESV 169 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 E + + R DA D A + I + S A A + Sbjct: 170 EGFVQAITLLKDGRVDATVNDN-LAVAEYQKQTGDTGVKIAAETGDTSEQAFAARKD 225 >gi|224827117|ref|ZP_03700213.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] gi|224600626|gb|EEG06813.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] Length = 254 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 78/251 (31%), Gaps = 21/251 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + + + A ++ G++ F++ A+G +GFD Sbjct: 1 MKKVLMAVALAAPLF---ASAAQAET---------IRFGVDLNYPPFSKQGADGKPQGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL SA+ + + +P + AL + + D + + T R+ + F Sbjct: 49 IDMAHALCSAL---KATCEIVPQDWDGLIPALNTNKFDAILSSMQITDERKK--AVDFTN 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y I K + G I +T E DY+ + + + Sbjct: 104 KYYNIPSRII-AKVGTKVDQNSFKGKKIGALRASTQEKFAKDYWGKTG--AKIVAYTKSP 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYN 239 E + R DA D + L R + P+ + N Sbjct: 161 ESFLDLTSGRLDAVFVDGAVGDQEFLKTPRGKGFAFVGPEYADAKYFGLGAGIAVKKGNN 220 Query: 240 IVSWTHYAMVT 250 + A + Sbjct: 221 ALRERLNAAIE 231 >gi|104782328|ref|YP_608826.1| arginine/ornithine ABC transporter periplasmic-binding protein [Pseudomonas entomophila L48] gi|95111315|emb|CAK16035.1| Arginine/ornithine ABC transporter, periplasmic binding protein [Pseudomonas entomophila L48] Length = 258 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 42/244 (17%), Positives = 77/244 (31%), Gaps = 23/244 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L + + G L+ GI F+ G+ GFD Sbjct: 1 MNKTGLLGALALCACSALTQA----------DEGSLRIGIEAAYPPFSYRTPAGELAGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + + K Q++ +L+ ++ID + + T + + F Sbjct: 51 YDIGNALCAQM---QVKCQWVIQEFDGMIPSLKVRKIDAVLSSMSITE--DRLKSVDFTD 105 Query: 121 ITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y F M ++ + L G + VQ +T + + + + + Sbjct: 106 KYYHTPGKFAMKAGSTLNDPVADLKGHKLGVQRASTYDRYATEQLEPAG--VEVVRYASQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 E A R DA DI + ++ +S A+ +GD Sbjct: 164 NEAFLDLVAGRLDATLADIVNTEESFIKTPAGQGFALVGPDVSDPQYFGRGAGIAVRKGD 223 Query: 235 TEWY 238 + Sbjct: 224 SANL 227 >gi|295675752|ref|YP_003604276.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295435595|gb|ADG14765.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 302 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 83/231 (35%), Gaps = 11/231 (4%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L F + + +A L +I K G LK + F V A+ +G+D+D L+ A+ Sbjct: 58 LAFHAGAAHADTLDNIAKTGVLKVAVPEDYPPFGSVGADMKPQGYDIDTAALLAKAM--- 114 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K++ +P+N+ R LQ+ ++D++ + T RE + F QG Sbjct: 115 NVKLELVPVNSANRIPYLQTGKVDLVISSLGKTPEREKV--IDFSSAYAPYYQGVFGPAD 172 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 +S + L+G ++ G E+ L FE AA+ + + Sbjct: 173 IKVSGPADLTGKTVGATRGALEEIGLTQMAP----NATIKRFEDNNATIAAFLSGQVQLI 228 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A+ P +I SP + + + V Sbjct: 229 AAGNIVAAAILA--KNPPRRPEPKFVIKNSPCFVGMNKNEPRLQQKVDAAI 277 >gi|260581867|ref|ZP_05849663.1| CTP synthetase [Haemophilus influenzae NT127] gi|260095060|gb|EEW78952.1| CTP synthetase [Haemophilus influenzae NT127] Length = 257 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 83/249 (33%), Gaps = 13/249 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L + F++FS I ++K L G F +G GFD Sbjct: 1 MKKLLFTTALLTGAIAFSTFSHAGEIADRVEKTKTLLVGTEGTYAPFTFHDKSGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R ++ + K+++ + L +K+ D+++ T E +F Sbjct: 61 VEVIRKVAEKLG---LKVEFKETRWDAMYAGLNAKRFDVIANQT--NPSPERLKKYSFTT 115 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + I S L G + KA +V + + Sbjct: 116 PYNYSGGVIVTKSSDNSIKSFEDLKGRKSA----QSATSNWGKDAKAAG--AQILVVDGL 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R +A D A+ + I D K+P A A +QG+ Sbjct: 170 AQSLELIKQGRAEATINDKLAVLDYFKQHPNSG-LKIAYDRGDKTPAAFAFLQGEDALIT 228 Query: 240 IVSWTHYAM 248 + A+ Sbjct: 229 KFNQVLEAL 237 >gi|148997552|ref|ZP_01825157.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP11-BS70] gi|168575853|ref|ZP_02721768.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus pneumoniae MLV-016] gi|147756607|gb|EDK63648.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP11-BS70] gi|183578334|gb|EDT98862.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus pneumoniae MLV-016] Length = 271 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L F + + + S + IK++G L + F V Sbjct: 4 KKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + + A A+ + Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234 Query: 233 GDTEWYNIVSWTHY 246 + +V Sbjct: 235 NSDDLKEVVDKVIQ 248 >gi|196045342|ref|ZP_03112574.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB108] gi|229182750|ref|ZP_04309990.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus BGSC 6E1] gi|196023926|gb|EDX62601.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB108] gi|228600723|gb|EEK58303.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus BGSC 6E1] Length = 264 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + P+ I + L++K+ D++ + T R + F Sbjct: 61 FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKNLVA------KHTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|182684353|ref|YP_001836100.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CGSP14] gi|303254549|ref|ZP_07340653.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS455] gi|303258989|ref|ZP_07344968.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP-BS293] gi|303261673|ref|ZP_07347620.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS292] gi|303264342|ref|ZP_07350262.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS397] gi|303265859|ref|ZP_07351756.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS457] gi|303268192|ref|ZP_07353991.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS458] gi|182629687|gb|ACB90635.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CGSP14] gi|301802134|emb|CBW34871.1| putative extracellular amino acid-binding protein [Streptococcus pneumoniae INV200] gi|302598517|gb|EFL65559.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS455] gi|302637253|gb|EFL67741.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP14-BS292] gi|302639932|gb|EFL70388.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP-BS293] gi|302642271|gb|EFL72619.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS458] gi|302644594|gb|EFL74844.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS457] gi|302646154|gb|EFL76381.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae BS397] Length = 271 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 80/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L F + + + S + IK++G L + F V Sbjct: 4 KKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPK----VQ 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E + + DA D + N + + + A A+ + Sbjct: 175 LTSLTNMGEAVNELQTGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234 Query: 233 GDTEWYNIVSWTHY 246 + +V Sbjct: 235 NSDDLKEVVDKVIQ 248 >gi|15903294|ref|NP_358844.1| amino acid ABC transporter amino acid-binding protein [Streptococcus pneumoniae R6] gi|116516603|ref|YP_816693.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae D39] gi|15458890|gb|AAL00055.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus pneumoniae R6] gi|116077179|gb|ABJ54899.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae D39] Length = 271 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L F + + + S + IK++G L + F V Sbjct: 4 KKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + + A A+ + Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234 Query: 233 GDTEWYNIVSWTHY 246 + +V Sbjct: 235 NSDDLKEVVDKVIQ 248 >gi|313650137|gb|EFS14550.1| cystine-binding periplasmic protein [Shigella flexneri 2a str. 2457T] Length = 266 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+ G L G+ F+ +G GF+V+F + Sbjct: 14 VMAVALVAGMSVKSFADEGLLNKVKESGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 74 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + + L G + V GT E ++ + + ++ Sbjct: 129 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242 Query: 245 H 245 Sbjct: 243 I 243 >gi|24112179|ref|NP_706689.1| glutamine ABC transporter periplasmic protein [Shigella flexneri 2a str. 301] gi|30062295|ref|NP_836466.1| glutamine ABC transporter periplasmic protein [Shigella flexneri 2a str. 2457T] gi|110804811|ref|YP_688331.1| glutamine ABC transporter periplasmic protein [Shigella flexneri 5 str. 8401] gi|24051019|gb|AAN42396.1| periplasmic glutamine-binding protein; permease [Shigella flexneri 2a str. 301] gi|30040540|gb|AAP16272.1| periplasmic glutamine-binding protein; permease [Shigella flexneri 2a str. 2457T] gi|110614359|gb|ABF03026.1| periplasmic glutamine-binding protein [Shigella flexneri 5 str. 8401] gi|281600136|gb|ADA73120.1| Periplasmic glutamine-binding protein; permease [Shigella flexneri 2002017] gi|313650288|gb|EFS14700.1| glutamine-binding periplasmic protein [Shigella flexneri 2a str. 2457T] Length = 248 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 83/245 (33%), Gaps = 20/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 53 LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + D + A +G E + V Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKGSDELRDKV 222 Query: 242 SWTHY 246 + Sbjct: 223 NGALK 227 >gi|320450574|ref|YP_004202670.1| amino acid ABC transporter binding protein [Thermus scotoductus SA-01] gi|320150743|gb|ADW22121.1| amino acid ABC transporter, binding protein [Thermus scotoductus SA-01] Length = 254 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 36/224 (16%), Positives = 76/224 (33%), Gaps = 11/224 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 L IK+ G ++ G F GF++D A++ + P ++ Sbjct: 18 AQVRTLDQIKRSGEIRIGTEGAFSPFNYFDEKNQLVGFEIDLGNAIAQKLGLKP---VWI 74 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + L + D + + T R + F ++ G I+ KK G + Sbjct: 75 TQAFDSLLIQLNQGRFDFVIASHGITEERAK--AVDFTNP-HYCTGGIIVSKKGGPKTAK 131 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +L G + VQ GTT +++ + + R DA+ D Sbjct: 132 ELQGKVVGVQIGTTYMEAAQKIPGIK----QVRTYQKDPDALQDLLSGRLDAWITDRFV- 186 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + + L +++ + +A A+ +G+ ++ Sbjct: 187 AKEAIKERKLENTLQLGELVFQERVAMAVAKGNKSVLQALNQAL 230 >gi|307329227|ref|ZP_07608392.1| extracellular solute-binding protein family 3 [Streptomyces violaceusniger Tu 4113] gi|306885126|gb|EFN16147.1| extracellular solute-binding protein family 3 [Streptomyces violaceusniger Tu 4113] Length = 303 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 78/235 (33%), Gaps = 10/235 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 ++S L +KRG + G G GFD++ + +++ + KI + Sbjct: 53 DSSTLKAAQKRGKIVIGAKADQPFLGFQDTEGKRSGFDIEIAKMVAADLGFSADKITFKT 112 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSV 140 +++ R ++ Q+D R+ +G F Y G ++ + I+ Sbjct: 113 VDSNVRETSISKGQVDYYVGTYTINDERKKQVG--FAGPYYQAGADLLVRMEDKGKITGP 170 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + G +C G+T + + + DA T D + Sbjct: 171 DSIKGKKVCSIVGSTPLQEIKKP----KYGAKTTELSKYSLCVKQLLDGQVDAVTTDDAI 226 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L R ++ ++ ++ P + + D + +S + + + Sbjct: 227 LKGYAAQ--RSTKLHVVGKPFTEEPYGIGMNKNDKALRDAISDSLEEHIKNGDYK 279 >gi|227489293|ref|ZP_03919609.1| family 3 extracellular solute-binding protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227090753|gb|EEI26065.1| family 3 extracellular solute-binding protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 336 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 97/232 (41%), Gaps = 13/232 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + ++ DI KRG++ G+ + A G+ GF++D ++ IF DPSK+ + Sbjct: 77 ASELIPDIYKRGYIIVGVEQSQNLMSYRDLATGELIGFEIDLAHEIARDIFGDPSKVAFR 136 Query: 82 PLNAKERFLALQ---SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++A R AL ++++D++ R T R + + F + GF+ K ++ Sbjct: 137 YVDAANREQALSAPPTERVDVVIRAMTMTKGR--ADNVDFSAPYFSTSAGFLTDKDSPVT 194 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 +V L+ A++CV G+ + +A I + A + + DA D Sbjct: 195 TVDDLNKATVCVAQGSINQYRVARIAP----GATLITTLSWSDCLMALQQQQVDAVFSDT 250 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + L + + S VI + + I QG+ V+ T ++ Sbjct: 251 ALLAGMAAQDAYTSMTVISEE---RDYYGIGIKQGNDNLTRQVNKTIERIIA 299 >gi|221234445|ref|YP_002516881.1| cystine transporter subunit [Caulobacter crescentus NA1000] gi|220963617|gb|ACL94973.1| cystine-binding protein [Caulobacter crescentus NA1000] Length = 269 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 48/228 (21%), Positives = 78/228 (34%), Gaps = 14/228 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 AS IK G L+ G+ F +G GF+VDF +AL+ + + Sbjct: 35 AGASGWDRIKASGKLRVGLEGTYPPFNFQDKSGQLAGFEVDFAKALAEQLGVKAE---FS 91 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P +L+S +ID++ T R+ F G I K K + Sbjct: 92 PAPFAGLLGSLESGRIDVVINQITITPDRQA--KYDFSEPYTVSGIQIIALKGKPAPTGP 149 Query: 142 Q-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+G + V GT E L +A+ ++ RA R DA D Sbjct: 150 EGLTGKKVGVGLGTNYEQWL----RANVPTADVRTYDDDPTKYQDLRAGRIDAVLNDRLV 205 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 T+ E V + A+ + D +++ A+ Sbjct: 206 AADFVKTSP---EFVASGQPFAAQGSGVAMQK-DPALKVVINQAINAL 249 >gi|153812542|ref|ZP_01965210.1| hypothetical protein RUMOBE_02941 [Ruminococcus obeum ATCC 29174] gi|149831467|gb|EDM86555.1| hypothetical protein RUMOBE_02941 [Ruminococcus obeum ATCC 29174] Length = 289 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 90/259 (34%), Gaps = 32/259 (12%) Query: 1 MYKDFFVSILCLIILF--FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++ ++ ++ S A I L G + + + NG++ G Sbjct: 1 MKKKAVAVVMTAVMALGMVSAVSVQAGIEDK-----TLIVGFDAEYPPYGYMDENGEYTG 55 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD++ +A+ + K P+N + + L S ID + + F Sbjct: 56 FDLELAQAVCDLEGWELEK---KPINWDSKDMELNSGSIDCIWNGFTMNGRED---DYTF 109 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT-----------ELTLADYFKAH 167 + Q ++ GI ++ L+G ++ VQA + + LAD F A Sbjct: 110 SEPYVDNSQVIVVADDSGIEKLTDLAGKTVGVQAASAALDLLQSEEEGGQKELADTFGAL 169 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 N F +A DA D A N R IL + ++ A Sbjct: 170 N------EFADYNTAFTELQAGALDALAID--VGVAKYQLNSRGEGFKILDETLNTEQYA 221 Query: 228 PAIIQGDTEWYNIVSWTHY 246 +G+TE +IV+ Sbjct: 222 IGFKKGNTELCDIVNADLQ 240 >gi|54302807|ref|YP_132800.1| amino acid ABC transporter periplasmic substrate-binding protein [Photobacterium profundum SS9] gi|46916231|emb|CAG23000.1| hypothetical amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium profundum SS9] Length = 271 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 90/252 (35%), Gaps = 23/252 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V I+ LF T+ + ++ + F A+G KGFD Sbjct: 14 MKKLMSVGIILASALFTTAQAA---------DEKVIRLASDFTYPPFNYKDASGTPKGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ AL + K +++ N AL S++ D + + T R+ + F Sbjct: 65 IEIADALCAEA---KLKCEWVSQNWDGLIPALLSRKADAIMASMRITEDRKK--RVLFTD 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y F+ K GI+ + L G +I VQ GT + + D + + Sbjct: 120 KYYQTPARFVTGKDSGITIDTAGLDGKTIGVQLGTIHDRYVTDIY---GDVAKIRRYTGQ 176 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +E+ + R DA G+ L L +R + + + ++ A A+ D Sbjct: 177 DEVYLDLVSGRLDAVFGNSDQLVLAFLEKERGKDFALAGEPVTDKAYIGEGTALALRLQD 236 Query: 235 TEWYNIVSWTHY 246 + + + Sbjct: 237 KKLADKFNQAIK 248 >gi|256017882|ref|ZP_05431747.1| cystine transporter subunit [Shigella sp. D9] Length = 266 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 85/241 (35%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 14 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 74 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K + + + L G + V GT E ++ + + ++ Sbjct: 129 IQALVKKGNEGTLKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNGA 242 Query: 245 H 245 Sbjct: 243 I 243 >gi|322832147|ref|YP_004212174.1| cationic amino acid ABC transporter periplasmic binding protein [Rahnella sp. Y9602] gi|321167348|gb|ADW73047.1| cationic amino acid ABC transporter, periplasmic binding protein [Rahnella sp. Y9602] Length = 244 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 85/257 (33%), Gaps = 25/257 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + T+ ++ G + F + A+ GFD Sbjct: 1 MKKLILAALLSATVFTATAA-------------DTIRFGTSATYPPFESIGADNQIIGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + AL+ ++ D++ D T R S + F Sbjct: 48 IDLANALCKQM---QETCTFTNQPFDGLIPALKFRRFDVIISGMDITEER--SKQVTFTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K +S++ L G + ++ GTT + L + + + ++ + Sbjct: 103 PYYANTAMIIGPKG-KFASIADLKGKRVGLENGTTHQKYL----MEKHPEITTVGYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL--PDIISKSPLAPAIIQGDTEWY 238 ++ R D GD + L +N E L + + A+ + E Sbjct: 158 NAILDLKSGRLDGLLGDTAVLNGWLKSNPNLGEVGELIKDPQYFGTGVGMAVRPDNKELL 217 Query: 239 NIVSWTHYAMVTAEELG 255 ++ + E Sbjct: 218 AKLNTALEGIKANGEFK 234 >gi|222148524|ref|YP_002549481.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] gi|221735510|gb|ACM36473.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] Length = 258 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 86/250 (34%), Gaps = 22/250 (8%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 F++ L L + A L G F ++A+G GFD+D + Sbjct: 7 FLAAASLTALSLFAGGAMAEE--------KLVIGTEGAYPPFNSLEADGSLTGFDIDIAK 58 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL + + + ALQ+K+ D + + T R + F Y Sbjct: 59 ALCEEM---KVTCTFKTNDWDGIIPALQAKKFDAIVASMSITPER--LEKVDFSKKYYNT 113 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + K SV L G +I Q T+ A+Y + H ++ +E Sbjct: 114 PPAIAVPKDSPAKSVEDLKGKTIGAQTSTSH----ANYAEKHMPDSQLKLYPTADEYKLD 169 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILP----DIISKSPLAPAIIQGDTEWYNIV 241 R DA D+ L ++ ++ P +I+ A+ +G+T + Sbjct: 170 ITNGRIDAVIDDVVVLTQWIKSDAGTCCKILTPLPIDPVINGEGAGIAVRKGETALADRF 229 Query: 242 SWTHYAMVTA 251 + A++ A Sbjct: 230 TKAI-AVIRA 238 >gi|218548332|ref|YP_002382123.1| glutamine ABC transporter periplasmic protein [Escherichia fergusonii ATCC 35469] gi|218355873|emb|CAQ88488.1| glutamine transporter subunit ; periplasmic binding component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|324112750|gb|EGC06726.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia fergusonii B253] Length = 248 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 84/245 (34%), Gaps = 20/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSVFKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 53 LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + D + A +G E + V Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKGSDELRDKV 222 Query: 242 SWTHY 246 + Sbjct: 223 NGALK 227 >gi|167837541|ref|ZP_02464424.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis MSMB43] Length = 266 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 81/250 (32%), Gaps = 16/250 (6%) Query: 1 MY--KDFFVSILCLIILF-FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F S L +L T+ + A +L ++++ G LK + F +G + Sbjct: 1 MKAFKPMFTSTLVAALLGIATASAHAADLLDNVRQAGVLKIALEGTYPPFDYRNGDGQLE 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD + +++ + P Q++ LQ+ + D++ T R+ L Sbjct: 61 GFDVDVAKEVAARLGVKP---QFVTTEWSGILAGLQAGKFDVIVNQVGITPARK--QALD 115 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + I + L G I V GT AD K Sbjct: 116 FSQPYVYSAAQLIQRADDKHDYGAPGALQGKRIGVTLGT----NFADLAKTLQ-GVDVKT 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E A R D D L L P ++ + +G+ Sbjct: 171 YPGAPEKLRDVAAGRIDVSMDDRLMLPYLIKNAHMPLR-PGATIKGGETQMGIPFRKGNP 229 Query: 236 EWYNIVSWTH 245 ++ + Sbjct: 230 KFAKAIDDAL 239 >gi|158423551|ref|YP_001524843.1| putative amino acid ABC transporter periplasmic amino acid-binding protein [Azorhizobium caulinodans ORS 571] gi|158330440|dbj|BAF87925.1| putative amino acid ABC transporter periplasmic amino acid-binding protein [Azorhizobium caulinodans ORS 571] Length = 307 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 82/249 (32%), Gaps = 8/249 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + + + S + I++ G + G V FA + N G+ V+ Sbjct: 8 KALAGIAVAVSWVALAGPVLADSRVDAIRQTGTITLGHPETSVPFAYLDGNQKPVGYTVE 67 Query: 63 FCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 C ++ SA+ I+Y P + R L + ID+ NT + R + F Sbjct: 68 ICEKIAGEIKSALNLPKLDIRYNPTTSATRIPLLANGTIDLECGNTTNNVERHKLVA--F 125 Query: 119 RPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 P T+ + K +++ + G +I QAG T ++ N Sbjct: 126 APTTFVAQVVLMARKDGGVDVNNPASFRGKTIAAQAGGQTFKVISQINAKGNYGITVAGA 185 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + E R D Y ++ P +I + +P + D E Sbjct: 186 KDTGEAFLMVETGRAAGTANDDGLAYGQVASSKTPDAFIIGTKSLEIAPYGIMEPKDDPE 245 Query: 237 WYNIVSWTH 245 + +V Sbjct: 246 FKKLVDDAV 254 >gi|294791037|ref|ZP_06756195.1| glutamate-binding protein [Scardovia inopinata F0304] gi|294458934|gb|EFG27287.1| glutamate-binding protein [Scardovia inopinata F0304] Length = 291 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 91/258 (35%), Gaps = 17/258 (6%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + + ++ S S S + G ++ GI G NG + GFDVD R Sbjct: 24 ILAVIAVLASVASVSACGST-----QSGHVIRIGIKFDQPGVGYK-KNGTYSGFDVDVAR 77 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + +I++ +K+R LQ+ +D++ + T R+ + ++F Sbjct: 78 YIAHKLGYKDYEIEWTEAPSKQRETMLQNGDVDMILASYSITDDRKKT--VSFAGPYLVA 135 Query: 126 GQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 GQ ++ K I L+G +C G+T+ + ++ K + E Sbjct: 136 GQDLLIRKSNTSIKGPDDLNGKRLCSVTGSTSATVVKQ---KYSNKVQLMEQPSYAECAT 192 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD--TEWYNIVS 242 A + DA T D L L + ++ ++ I + + ++ Sbjct: 193 ALFSGIVDAVTTDDIILAGLASNSRGK--LKLVGHPFTQEYYGVGIQKNKKTKAFAKKIN 250 Query: 243 WTHYAMVTAEELGITQKN 260 M+ N Sbjct: 251 AAIKDMIKTGAWKRAIWN 268 >gi|172039490|ref|YP_001805991.1| glutamine-binding protein of glutamine ABC transporter [Cyanothece sp. ATCC 51142] gi|171700944|gb|ACB53925.1| glutamine-binding protein of glutamine ABC transporter [Cyanothece sp. ATCC 51142] Length = 260 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 85/245 (34%), Gaps = 12/245 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + ++ +I + + A+ L +IK+RG L + + N +G ++D Sbjct: 7 RKLVSMLIIGVIFNLGNSNLIAATLEEIKQRGKLIVAVKDNVRPLGFRNQNNQLQGLEID 66 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + L+ I DP I P+ +ER + ++D+ R + F P Sbjct: 67 LAKQLAQDILGDPQAIILQPVQNQERLQKVIDGEVDLAIARITINSSRGRL--VNFSPYY 124 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y DG G I + I +V LS I + ++T + I +E Sbjct: 125 YLDGTGIITNNP-RIRAVDHLSQGKIALLKRSSTIAVIRAELPQA----ELIGVNSYQEA 179 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNI 240 + DA+ D S L ++ LP +S L + + + Sbjct: 180 LTLLETEQVDAFAADNSVLAGWVQAYP---QYYQLPVRLSGEGLGVVMPKGLQYASLRSR 236 Query: 241 VSWTH 245 V+ Sbjct: 237 VNEAI 241 >gi|299536213|ref|ZP_07049526.1| histidine-binding protein precursor (Hbp) [Lysinibacillus fusiformis ZC1] gi|298728199|gb|EFI68761.1| histidine-binding protein precursor (Hbp) [Lysinibacillus fusiformis ZC1] Length = 265 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 80/255 (31%), Gaps = 16/255 (6%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNASILGDIKK-------RGFLKCGINTGLVGFAEVK 51 M K + I+ + L T + K G F V Sbjct: 1 MKKTGWMLLMIIAALTLALAGCGTKDDASSGSSSSEDGGDGKKVYKVGTEATFAPFESVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G G DVD +A++ + ++++ + + F +++ + DI + T R+ Sbjct: 61 DSGKIVGIDVDILQAIADEM---DFEVEWNNIGWEPVFQTIKNGETDIGASGITITEERK 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F Y ++ + I S+ +L + VQ T + Sbjct: 118 E--SFDFTEPYYESQLLIVVKEDSKIKSLDELKDKKVSVQINATGHMAAKKLQGEA--ST 173 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + FE DA GD + +Y + VI D K + Sbjct: 174 NIMAFESQPIAIQEMLNGNVDAAIGDNAVVYEYIKAHPDQKLKVIEDDAFEKEYYGFMVQ 233 Query: 232 QGDTEWYNIVSWTHY 246 +G+ E + ++ Sbjct: 234 KGNKELLDKLNEGLK 248 >gi|169795312|ref|YP_001713105.1| lysine/arginine/ornithine/histidine ABC transporter periplasmic substrate-binding protein [Acinetobacter baumannii AYE] gi|184158821|ref|YP_001847160.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii ACICU] gi|213158701|ref|YP_002319999.1| histidine-binding periplasmic protein [Acinetobacter baumannii AB0057] gi|215482845|ref|YP_002325048.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Acinetobacter baumannii AB307-0294] gi|294838850|ref|ZP_06783533.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Acinetobacter sp. 6013113] gi|294843462|ref|ZP_06788145.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Acinetobacter sp. 6014059] gi|294858196|ref|ZP_06795965.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Acinetobacter sp. 6013150] gi|301347432|ref|ZP_07228173.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Acinetobacter baumannii AB056] gi|301512550|ref|ZP_07237787.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Acinetobacter baumannii AB058] gi|301595884|ref|ZP_07240892.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Acinetobacter baumannii AB059] gi|169148239|emb|CAM86102.1| Lysine-arginine-ornithine-histidine-binding periplasmic protein precursor (ABC superfamily, peri_bind) [Acinetobacter baumannii AYE] gi|183210415|gb|ACC57813.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Acinetobacter baumannii ACICU] gi|213057861|gb|ACJ42763.1| histidine-binding periplasmic protein [Acinetobacter baumannii AB0057] gi|213987355|gb|ACJ57654.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Acinetobacter baumannii AB307-0294] gi|322507366|gb|ADX02820.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii 1656-2] gi|323518736|gb|ADX93117.1| amino acid ABC transporter periplasmic protein [Acinetobacter baumannii TCDC-AB0715] Length = 261 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 82/256 (32%), Gaps = 22/256 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L L + + K ++ G + F +G GFD Sbjct: 5 MKKIFVSTTLVLAAVATNVQA---------KDWKVIRFGTESSYAPFEYKTPDGKLTGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + + +K ++ + AL++K+ D + + T R + F Sbjct: 56 VDLGNAICAKL---KAKCVWVENSFDGMIPALKAKKFDGILSSMTVTDERAK--QILFSS 110 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K + + + L G + VQ GT E Y+ + + + Sbjct: 111 KIYNTPTRMVAKKGSPLLPTPTSLKGKRVGVQQGTIQETYAKTYWAPKGVS--VVPYPTQ 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + R DA D + L + + A + + D Sbjct: 169 DLIYQDMMSGRLDATLQDAIMVDGAFLKQPKGKNFSFAGGNVVDVKTLGVGAAIGLRKED 228 Query: 235 TEWYNIVSWTHYAMVT 250 + + A++ Sbjct: 229 ADLKANIDKALAAIIA 244 >gi|186686345|ref|YP_001869541.1| polar amino acid ABC transporter inner membrane subunit [Nostoc punctiforme PCC 73102] gi|186468797|gb|ACC84598.1| polar amino acid ABC transporter, inner membrane subunit [Nostoc punctiforme PCC 73102] Length = 496 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 81/235 (34%), Gaps = 13/235 (5%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANG-- 54 M K + ++IL + ++ + + +++ L + G L + + G Sbjct: 1 MKKKKAWLLTILVVAVVGISIITGHSNSLKAVSSLGKDTLTMITSPDYPPYEFYDTKGGD 60 Query: 55 -DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 GFD+D + L+ + K+Q + + ALQ+ + D + T R+ Sbjct: 61 RQIVGFDIDIAKTLAEKLG---FKLQIMESDFNGLIPALQANRADFVMAGMTPTPERQK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F I Y + K + L G + VQ GT E A Sbjct: 117 -NIDFSIIYYEAKDTIVAPKGSNLKQPQDLLGKKLGVQLGTIQEQN-ARKISQKVAGIQL 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 +V E+ ++ R DA + + N + I + S S +A Sbjct: 175 KQLNKVPEVVQEIKSGRIDAAIVEDTVAKGFAQANPDLEFNTIPSEEASGSAIAF 229 >gi|294853535|ref|ZP_06794207.1| polar amino acid transport system substrate-binding protein [Brucella sp. NVSL 07-0026] gi|294819190|gb|EFG36190.1| polar amino acid transport system substrate-binding protein [Brucella sp. NVSL 07-0026] Length = 291 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 39/264 (14%), Positives = 78/264 (29%), Gaps = 13/264 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ + +I + + L IK G LK G F + GFD Sbjct: 1 MKFAQILATVGIIQAVLFTGAMAGENLDAIKSAGVLKIGTEGTYAPFTYHDKDNKLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A++ + P ++ L + + D + T R+ F Sbjct: 61 VEIGEAIAGKLGVKPE---FVEGKWDGLIAGLDANRYDAVINQVGITEERKK--KFNFSN 115 Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + K I + L G Q+ T+ LA A + + Sbjct: 116 PYIVSKVVLIVNDKNDTIKDFADLKGKK-AAQSLTSNYGRLAKEAGAK-----LVATDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ R DA D + + + ++ + + + +GD E Sbjct: 170 DQSIQLVLTGRADATLNDSLSYLDFRKHQPKAPV-KVVAEKDEATASGIIVRKGDDELVA 228 Query: 240 IVSWTHYAMVTAEELGITQKNINQ 263 ++ + +NI+ Sbjct: 229 AINKALDEIKADGTYNKISQNISA 252 >gi|289771597|ref|ZP_06530975.1| sugar-binding protein [Streptomyces lividans TK24] gi|289701796|gb|EFD69225.1| sugar-binding protein [Streptomyces lividans TK24] Length = 352 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 87/273 (31%), Gaps = 18/273 (6%) Query: 16 FFTSFSTNASILGDIKKR----GFLKCGINTGLVGFAEVKANG----DWKGFDVDFCRAL 67 + + I+ R L G++ + N + +GFD+D + Sbjct: 76 TLAPSGDDGPTIDRIRAREGEKRKLIVGVDQNSFRWGYRDPNSGGDAELEGFDIDLAHRI 135 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + D +Q+ + +R A+Q ++D++ R + +AF + GQ Sbjct: 136 AKDVLGDEDAVQFKAIPTDQRVPAIQDGRVDMVVRTMTINC--DRLEDVAFSAPYFRTGQ 193 Query: 128 GFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHP---IVFERVEEID 183 + K I+ L+G IC AG+T TL K + + Sbjct: 194 QVLAPKSSKITGYDGTLAGKEICTAAGSTALSTLEQDQKDGRLAEGVDLRTTVPNQLDCL 253 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + DA D + + + + D + A+ + + V+ Sbjct: 254 VRLQLGEVDAVVTDGALAASQAAQDP---TVELKGDAFTTEYYGVAMKKDADDLVRRVNR 310 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 A+ Q + + +T + + Sbjct: 311 VLEQW-RADRADGWQHSYEEWLSETMDDPAKSL 342 >gi|283785665|ref|YP_003365530.1| cystine-binding periplasmic protein [Citrobacter rodentium ICC168] gi|282949119|emb|CBG88726.1| cystine-binding periplasmic protein [Citrobacter rodentium ICC168] Length = 266 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 81/254 (31%), Gaps = 20/254 (7%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M V + L+ + +L +K RG L G+ F+ + Sbjct: 1 MKLALLGRQALMSVMAVALVAGMSAKTFADEGLLKKVKDRGTLLVGLEGTYPPFSFQGDD 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+V+F L+ + P +L SK+ID++ + R+ Sbjct: 61 GKLTGFEVEFAEELAKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I + + L + V GT E ++ + + Sbjct: 117 -KYDFSTPYTVSGIQALVKKGNEGTIETAADLKDKKVGVGLGTNYE----EWLRQNVQGV 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + + S+ A+ Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKDTLAVTGEAFSRQEAGVAVR 229 Query: 232 QGDTEWYNIVSWTH 245 +G+ + V Sbjct: 230 KGNEDLLKAVDAAI 243 >gi|171779325|ref|ZP_02920289.1| hypothetical protein STRINF_01170 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281942|gb|EDT47373.1| hypothetical protein STRINF_01170 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 280 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 76/255 (29%), Gaps = 15/255 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKANG 54 K ++ + + + +++S +K G + G + V +G Sbjct: 4 KKVLLSAMALVATVSLAACGSSSSKKVAKTDRWKTYQKDGKITIGFDNTFVPMGYEDEDG 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+D A+ K+++ +N + L + ID++ + R Sbjct: 64 KNVGFDIDLANAVFEQYG---IKVKWQSINWDMKETELNNGTIDLIWNGYSISDERAE-- 118 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KY 171 + F + Q + K GI+S + + + Q+G++ K Sbjct: 119 KVLFTNPYMVNEQVLVTKKSSGITSFAGMKDKVLGAQSGSSGYDAFNAKPKVLKDIVSGG 178 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 +E + + +R D D + I+ A Sbjct: 179 DATQYETFTQALVDLKNNRIDGLLIDKVYANYYLEQEGELDNYNIIASEFDGEDFAVGAR 238 Query: 232 QGDTEWYNIVSWTHY 246 + D ++ Sbjct: 239 KADKTLVKKINQAFQ 253 >gi|320547041|ref|ZP_08041340.1| polar amino acid uptake ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Streptococcus equinus ATCC 9812] gi|320448326|gb|EFW89070.1| polar amino acid uptake ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Streptococcus equinus ATCC 9812] Length = 298 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 84/267 (31%), Gaps = 20/267 (7%) Query: 1 MY-KDFFVSILCLII---LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KAN 53 M K F + L L+ L S+N ++ I K+G L I+ F Sbjct: 28 MKVKKFILGALALVSVCSLAACGSSSNENLQDKIDKKGKLVVAISPDYAPFEFKALIDGK 87 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G DV+ +A++ + K++ ++ +LQ+ + D+ T R Sbjct: 88 DTIVGADVELAKAIADEL---DVKLELSSMSFDNVLSSLQTGKADMAISGLSATKER--K 142 Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F Y ++ +S+ LSG + VQ GT E + K Sbjct: 143 NAYDFSDAYYETENAVLVKASDLDKYNSIDSLSGLKVAVQKGTIEEGLAKEQLK----DS 198 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 I + E ++ + A + N + A A+ Sbjct: 199 KIISLTAMGEAINELKSGQVQAVDLEKPVAEGYLSQNSDLALANFALKTSDGDAKAVAMP 258 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQ 258 +G + V+ A+E Q Sbjct: 259 KGSGKLVKTVNKVIK--KLAKEDKYKQ 283 >gi|115350421|ref|YP_772260.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|170698931|ref|ZP_02889991.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|172059445|ref|YP_001807097.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|115280409|gb|ABI85926.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] gi|170136184|gb|EDT04452.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|171991962|gb|ACB62881.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 266 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 14/232 (6%) Query: 17 FTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLGVKT 78 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 Q++P LQ+ + D++ T R+ L F + I K Sbjct: 79 ---QFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEV--LDFSQPYTYSAAQLIQRKDD 133 Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 S+ G + V GT D + E A R +A Sbjct: 134 TRNFKSLEDFKGKKLGVTLGTNY-----DQMARSVPGIEVQTYPGAPEKLRDLAAGRIEA 188 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D L + T++ P + + + +A +G+ ++ ++ Sbjct: 189 TLDDRLMLPYMIKTSNLPLRSGAVLNGGKQE-MAIPFRKGNPKFEKAINDAL 239 >gi|319945077|ref|ZP_08019339.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lautropia mirabilis ATCC 51599] gi|319741647|gb|EFV94072.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lautropia mirabilis ATCC 51599] Length = 270 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 71/228 (31%), Gaps = 13/228 (5%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 L +++RG L+ GI F G + GF++D AL+ + Q Sbjct: 29 AHAADDALNAVQQRGTLRIGIEGTYPPFNYQDEKGQFVGFEIDLGNALAETLGVKA---Q 85 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGI 137 + P AL S +ID++ T R+ F G + K + Sbjct: 86 FQPTKWDGLLAALDSGRIDVIINQVTITDARQK--KYRFSQPYTVSGIQAVTRTKDADTL 143 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S + L+G + V GT+ E + +E + R DA D Sbjct: 144 QSPNALAGKKVGVGLGTSYEEWARRTVPSA----EVRTYEDDPTKNQDLAVGRLDAVLVD 199 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L AL + + S+ + D + + Sbjct: 200 R--LAALYQVKQSKNRFALGGPAFSRQTSGIPTRKSDESLHQAIDQAL 245 >gi|304395377|ref|ZP_07377260.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] gi|304356671|gb|EFM21035.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] Length = 261 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 45/227 (19%), Positives = 88/227 (38%), Gaps = 10/227 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + S A L DI+KRG ++ + F V + +G+D+D + L+ + K+ Sbjct: 18 AGSALADQLQDIQKRGVIRVAVPQDFPPFGSVGTDLQPQGYDIDTAKYLAKQM---KLKL 74 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Q +P+++ R LQ+ ++D++ + RE + F G K I Sbjct: 75 QLVPVSSANRVPYLQTDKVDLVISSMGKNAEREKV--IDFTRAYAPFFLGVFGPKGDEIK 132 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + S LSG SI V G ++ L+D +E +AY + + Sbjct: 133 AASALSGKSIGVTRGAVEDMVLSDVAPK---DAQIKRYEDNNTTLSAYLSGQVQYVATGN 189 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + A+ P++ + ++ SP + + + V+ Sbjct: 190 LVVAAIARQ--NPAKAPVAQFMLKDSPCFIGLKKDEPALKAKVNALI 234 >gi|225860826|ref|YP_002742335.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus pneumoniae Taiwan19F-14] gi|298229503|ref|ZP_06963184.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254195|ref|ZP_06977781.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502655|ref|YP_003724595.1| amino acid ABC superfamily transporter ATP-binding protein [Streptococcus pneumoniae TCH8431/19A] gi|225727378|gb|ACO23229.1| ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus pneumoniae Taiwan19F-14] gi|298238250|gb|ADI69381.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pneumoniae TCH8431/19A] gi|301794435|emb|CBW36869.1| putative extracellular amino acid-binding protein [Streptococcus pneumoniae INV104] gi|327389580|gb|EGE87925.1| bacterial extracellular solute-binding s, 3 family protein [Streptococcus pneumoniae GA04375] Length = 271 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 82/254 (32%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L F + + + S + IK++G L + F V Sbjct: 4 KKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ L ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEILSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + + A A+ + Sbjct: 175 LTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234 Query: 233 GDTEWYNIVSWTHY 246 + +V Sbjct: 235 NSDDLKEVVDKVIQ 248 >gi|119383821|ref|YP_914877.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119373588|gb|ABL69181.1| L-glutamate-binding protein / L-aspartate-binding protein [Paracoccus denitrificans PD1222] Length = 295 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 82/232 (35%), Gaps = 6/232 (2%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS---SAIFDDPSKIQYLP 82 L I + G + F+ + A+ GF +D C + A ++ Y+P Sbjct: 28 TLERIASNEAITIGYREASIPFSYLGADQQPIGFSLDLCARIVDSIEAKLGKEIRVNYVP 87 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 +N+ R +Q+ +DI T R ++F T+ +++ + + Sbjct: 88 VNSSNRIPLIQNGTVDIECGGTANNKTR--QEQVSFSVATFVSQPRWLVLARNDLKGADD 145 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ V + + A A M + + E + R A+ D L Sbjct: 146 LKGKTV-VATQGSNAVGFAQALSAQGMDLNIAQAKDHAESFLMLTSGRAVAFMEDDILLA 204 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 L+ P+ LP+ + + D E+ +V T ++ + E Sbjct: 205 GLRAAAPDPAALAFLPEAYDRIYYGLMFTKDDAEFKAVVDDTLKGLMASGEF 256 >gi|289705232|ref|ZP_06501631.1| bacterial extracellular solute-binding protein, family 3 [Micrococcus luteus SK58] gi|289557982|gb|EFD51274.1| bacterial extracellular solute-binding protein, family 3 [Micrococcus luteus SK58] Length = 297 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 80/221 (36%), Gaps = 7/221 (3%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L+ GI G + + GFD D R ++ + I+++ + R AL++ Sbjct: 53 LRIGIKFDQPGLGYREGSAQPTGFDTDVARYVADKLGVAEKDIEWVQTPSANRENALENG 112 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGT 154 ++D++ T R+ + F + GQ ++ I+ L G ++C G+ Sbjct: 113 EVDMIFATYSITDARKE--RVDFAGPYFVAGQDLLVRADDTAITGPESLDGKNLCSVTGS 170 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T+ + D F + + + E + + DA T D L L + + Sbjct: 171 TSAQKIKDQFAS---GVNLVEQGGYAECVTYLESGQVDAVTTDDIILAGLAAADANKGKF 227 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 ++ + + + + +I + M + E Sbjct: 228 KVVGNTFTTERYGVGLPKDSERCEDI-NGAIKEMKDSGEWK 267 >gi|237731966|ref|ZP_04562447.1| cystine transporter subunit [Citrobacter sp. 30_2] gi|226907505|gb|EEH93423.1| cystine transporter subunit [Citrobacter sp. 30_2] Length = 273 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 83/254 (32%), Gaps = 20/254 (7%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M V + L+ + +L +K+RG L G+ F+ + Sbjct: 8 MKLALLGRQALMGVMAVALVAGMSVKTYADEGLLNKVKERGTLLVGLEGTYPPFSFQGDD 67 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+V+F L+ + P +L SK+ID++ + R+ Sbjct: 68 GKLTGFEVEFAEELAKHLGVKA---NLKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I + + L G + V GT E ++ + + Sbjct: 124 -KYDFSTPYTVSGIQALVKKGNEGVIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGV 178 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + + S+ A+ Sbjct: 179 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKDTLAVTGEAFSRQESGVALR 236 Query: 232 QGDTEWYNIVSWTH 245 +G+ + V Sbjct: 237 KGNEDLLKAVDAAI 250 >gi|171316136|ref|ZP_02905361.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171098740|gb|EDT43534.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 268 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 86/245 (35%), Gaps = 12/245 (4%) Query: 2 YKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + +++ ++ F + A L I K G L+ + F V A+ +G+D Sbjct: 10 RRAWLAALIAAPVMALFVAAPARADALDTIAKSGALRVAVPEDYPPFGSVGADMQPQGYD 69 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ ++ ++ +P+N+ R L + ++D++ + T RE + F Sbjct: 70 IDMAELLAKSLGVK---LKLVPVNSANRIPYLTTNKVDMVISSLGKTPEREKV--VDFST 124 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 QG +S+ + L+G ++ G E+ L+ FE Sbjct: 125 AYAPYYQGVFGPADVKVSTPADLNGKTVGATRGALEEIALSQLAP----NATIKRFEDNN 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + + A+ P + +I SP + + + Sbjct: 181 ATIQAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEVKFVIKNSPCFVGVNKNEARLLAK 238 Query: 241 VSWTH 245 + Sbjct: 239 IDDAI 243 >gi|270262369|ref|ZP_06190641.1| hypothetical protein SOD_b05770 [Serratia odorifera 4Rx13] gi|270044245|gb|EFA17337.1| hypothetical protein SOD_b05770 [Serratia odorifera 4Rx13] Length = 263 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 86/255 (33%), Gaps = 16/255 (6%) Query: 2 YKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + ++ + + S ++L +K+RG L G+ F+ +G+ GF Sbjct: 7 RRQLLLGVMTVALTAGLSAQTYAADNLLQQVKQRGTLIVGLEGTYPPFSFQGEDGNLTGF 66 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VDF AL+ I + P +L+SK+ID++ + R+ F Sbjct: 67 EVDFANALAQHIGVKA---KLNPTKWDGMLASLESKRIDVVINQVTISDERKK--KYDFS 121 Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G ++ K I+ L G + V GT E L + + ++ Sbjct: 122 TPYTVSGIQALVKKGNEGTIAKPEDLKGKKVGVGLGTNYEQWL----RENVQGVDVRTYD 177 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE- 236 R R +A D L AL L + S+ A+ + Sbjct: 178 DDPTKYQDLRIGRINAILVDR--LAALDLVKKTGDTLAVAGPAFSRQESGVAVRKTTRNC 235 Query: 237 WYNIVSWTHYAMVTA 251 W + TA Sbjct: 236 WQRLTRRLPRCKKTA 250 >gi|90411331|ref|ZP_01219343.1| hypothetical amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium profundum 3TCK] gi|90327860|gb|EAS44191.1| hypothetical amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium profundum 3TCK] Length = 258 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 88/252 (34%), Gaps = 23/252 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V I+ LF T+ + ++ + F A+G KGFD Sbjct: 1 MKKLMSVGIILASALFTTAQAA---------DEKVVRLASDFTYPPFNYKDASGTPKGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ AL K +++ N AL S++ D + + T R+ + F Sbjct: 52 IEIADALCVEA---KLKCEWVSQNWDGLIPALLSRKADAIMASMRITEERKK--RVLFTD 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y F+ K GI+ + L G +I VQ GT + + D + + Sbjct: 107 KYYQTPARFVTGKDSGITIDTAGLDGKTIGVQLGTIHDRYVTDIY---GDVAKIRRYTGQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +E+ + R DA G+ L L +R + + ++ A A+ D Sbjct: 164 DEVYLDLESGRLDAVFGNSDQLVLAFLEKERGKNFELAGEPVTDKAYIGEGTALALRLQD 223 Query: 235 TEWYNIVSWTHY 246 + + + Sbjct: 224 KKLADKFNQAIK 235 >gi|86358031|ref|YP_469923.1| amino acid ABC transporter substrate-binding protein [Rhizobium etli CFN 42] gi|86282133|gb|ABC91196.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 257 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 89/261 (34%), Gaps = 23/261 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + F + + + LF S + G ++ F V A+G +GFD+D Sbjct: 6 RIFAAASIAAMSLFAGSAMADGE---------KYVIGTDSTYPPFEFVDASGTIQGFDID 56 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +AL + + ++ ++ + AL +K+ D++ + T R + F Sbjct: 57 IAKALCAEM---KAECSFVSTDWDGIIPALNAKKFDMIVSSMSITPERLKL--VDFSNKY 111 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y + K I+ V+ L G I Q TT + ++ +E Sbjct: 112 YNTPPAIAVPKDSKITDVAGLKGKVIGAQTSTTHANYAEKHLA----DTELKLYPTADEY 167 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWY 238 + R DA D+ L ++ ++ + K AI +GD Sbjct: 168 KLDVSSGRVDAVIDDVVVLSEWVKSDAGACCKILTTLPVDKEINGNGAGIAIRKGDP-LK 226 Query: 239 NIVSWTHYAMVTAEELGITQK 259 ++ A+ + E Q Sbjct: 227 EKLNTAIAAIRASGEYKKIQD 247 >gi|83647880|ref|YP_436315.1| amino acid ABC transporter periplasmic protein [Hahella chejuensis KCTC 2396] gi|83635923|gb|ABC31890.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Hahella chejuensis KCTC 2396] Length = 258 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 89/254 (35%), Gaps = 27/254 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + K ++ G++ FA A G+ +GFD Sbjct: 1 MKKLLITLVSVLAFSSAQA-----------KDWKEIRIGVDATYPPFASKNAAGELEGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ AL + + +K +++ + AL +++ D + + T R + F Sbjct: 50 IEIGNALCAEM---KAKCEWVVQDWDGIIPALLARKYDAILSSMSITEER--REKVLFSD 104 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G++ K GI ++QL G S+ VQ GT + +++ + + Sbjct: 105 KYYNTPSGWVAKKGAGIDPSDMNQLKGKSVGVQRGTIQDTYVSE---ELKDIVNIKRYAG 161 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL------PDIISKSPLAPAIIQ 232 +E +A R D D A L + + P I A+ + Sbjct: 162 QDEAYLDMKAGRLDLLFVDALAADGGFLKKEAGQDFEFAGPMITEPVRIFGEGAGIAVRK 221 Query: 233 GDTEWYNIVSWTHY 246 DT+ N + Sbjct: 222 RDTDLANKFNAAIK 235 >gi|77413248|ref|ZP_00789445.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 515] gi|77160708|gb|EAO71822.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 515] Length = 301 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 34/254 (13%), Positives = 76/254 (29%), Gaps = 14/254 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDI------KKRGFLKCGINTGLVGFAEVKANGD 55 I L ++ ++ + + I +K + G + V +GD Sbjct: 29 KNILLTIIFGLFMIILSACGMSNKEMAGIDNWEHYQKEKKITIGFDNTFVPMGFESRSGD 88 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D A+ +++ P+N + L + ID++ T R Sbjct: 89 YTGFDIDLANAVFKEYG---ISVKWQPINWDMKETELNNGNIDLIWNGYSKTTERAK--K 143 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 +AF + Q + I+S+ + G + Q+G++ D K Sbjct: 144 VAFTNPYMNNHQVIVTKTSSHINSIKDMKGKKLGAQSGSSGFDAFNAKPDILKKFVKGKE 203 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + ++ + + +R D D + + + Sbjct: 204 AVQYDTFTQALIDLKNNRIDGLLIDEVYANYYLKQEGNIKAYYFVKTAYQGENFVVGARK 263 Query: 233 GDTEWYNIVSWTHY 246 D ++ Sbjct: 264 VDRRLIEKINKAFK 277 >gi|308187619|ref|YP_003931750.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Pantoea vagans C9-1] gi|308058129|gb|ADO10301.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Pantoea vagans C9-1] Length = 260 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 78/250 (31%), Gaps = 21/250 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L + S G ++ G + F A G GFD Sbjct: 1 MKKRVLALSLMLGLTSAASVFAAVQ--------GSIRIGTDPTYPPFESKDAQGQLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + I ++ Y+ + +L++K+ID + + T R+ + F Sbjct: 53 IDLANEICKRI---HTQCTYVESDFDALIPSLKAKKIDAIISSLSITAKRQEEIA--FSE 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K I ++ L G +I + GTT E ++ + P + Sbjct: 108 KLYAANARLVAPKGSKIQPTIESLKGKNIGLLQGTTQETYANQNWRPKGVNVTP--YANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + A R DA D L + + + + + D Sbjct: 166 DLVYQDLNAGRIDAAFQDEVQASEGFLKQPVGKNYAFAGPSVKDDKIFGVGTGMGLRKDD 225 Query: 235 TEWYNIVSWT 244 +E + Sbjct: 226 SELKAAIDKA 235 >gi|16759797|ref|NP_455414.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764248|ref|NP_459863.1| arginine transport system component [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142430|ref|NP_805772.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56414023|ref|YP_151098.1| arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62179449|ref|YP_215866.1| arginine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161614848|ref|YP_001588813.1| hypothetical protein SPAB_02601 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550405|ref|ZP_02344162.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992140|ref|ZP_02573238.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230794|ref|ZP_02655852.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236832|ref|ZP_02661890.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240768|ref|ZP_02665700.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263593|ref|ZP_02685566.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168466505|ref|ZP_02700367.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168819949|ref|ZP_02831949.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194446347|ref|YP_002040125.1| arginine ABC transporter periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450634|ref|YP_002044917.1| arginine ABC transporter periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194468477|ref|ZP_03074461.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194737012|ref|YP_002113980.1| arginine ABC transporter periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197250634|ref|YP_002145840.1| arginine ABC transporter periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197263320|ref|ZP_03163394.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197362946|ref|YP_002142583.1| arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243138|ref|YP_002214851.1| arginine ABC transporter periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200391119|ref|ZP_03217730.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929898|ref|ZP_03220919.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207856319|ref|YP_002242970.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213052503|ref|ZP_03345381.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213417552|ref|ZP_03350694.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213428042|ref|ZP_03360792.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580630|ref|ZP_03362456.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213647861|ref|ZP_03377914.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|224582737|ref|YP_002636535.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238913404|ref|ZP_04657241.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289825018|ref|ZP_06544381.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25296352|pir||AD0607 arginine-binding periplasmic protein 2 precursor [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16419395|gb|AAL19822.1| arginine 3rd transport system [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502090|emb|CAD05326.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Typhi] gi|29138060|gb|AAO69621.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56128280|gb|AAV77786.1| arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62127082|gb|AAX64785.1| ABC superfamily (bind_prot), arginine 3rd transport system [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161364212|gb|ABX67980.1| hypothetical protein SPAB_02601 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194405010|gb|ACF65232.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408938|gb|ACF69157.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194454841|gb|EDX43680.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194712514|gb|ACF91735.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631092|gb|EDX49678.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094423|emb|CAR59939.1| arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197214337|gb|ACH51734.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241575|gb|EDY24195.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290083|gb|EDY29440.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197937654|gb|ACH74987.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603564|gb|EDZ02110.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320892|gb|EDZ06093.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205324560|gb|EDZ12399.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329626|gb|EDZ16390.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334795|gb|EDZ21559.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205340189|gb|EDZ26953.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343014|gb|EDZ29778.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347767|gb|EDZ34398.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708122|emb|CAR32415.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467264|gb|ACN45094.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246142|emb|CBG23945.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992649|gb|ACY87534.1| arginine transport system component [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157469|emb|CBW16959.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911914|dbj|BAJ35888.1| arginine ABC transporter substrate binding protein ArtJ [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085161|emb|CBY94948.1| Arginine-binding periplasmic protein 1 Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223248|gb|EFX48317.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322713918|gb|EFZ05489.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129191|gb|ADX16621.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326622604|gb|EGE28949.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627179|gb|EGE33522.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 243 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 81/250 (32%), Gaps = 25/250 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + + G++ F + A+ GFD Sbjct: 1 MKKLVLAALLASFATGSIAAE-------------KINFGVSATYPPFESLDASNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + ++ + AL+ ++ D + D T R + F Sbjct: 48 IDLATALCKQM---QAECTFTNHAFDSLIPALKFRKYDAVISGMDITPERSKQVA--FSN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++ KK + + L G I ++ GTT + L D + ++ + Sbjct: 103 PY-YANSALVIAKKDTYKTFTDLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + TN + P+ + + L A+ + Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPQLGPATEKVTDPQYFGTGLGIAVRPDNKALL 217 Query: 239 NIVSWTHYAM 248 ++ A+ Sbjct: 218 EKLNNALAAI 227 >gi|134292928|ref|YP_001116664.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia vietnamiensis G4] gi|134136085|gb|ABO57199.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia vietnamiensis G4] Length = 260 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 92/255 (36%), Gaps = 21/255 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ + + +L ++ A K L+ G + F +G GFD Sbjct: 1 MKR--LIAAVSIALLAVSAGPAAA------KDWTTLRFGTDASYAPFESKAPDGKLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + +K +L + AL++K+ D + + T R +G F Sbjct: 53 IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITPQRAEQIG--FTT 107 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y ++ K + + L G SI V+ GTT E Y+ + + ++ Sbjct: 108 KIYNQPTRLVVKKGSPLLPTAESLKGKSIGVEQGTTQEAYAKAYWAKQG--ANVVSYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + A A R DA D L + R + + + + + + + D Sbjct: 166 DGVYADLTAGRLDAALQDEVQAAIGFLKSPRGAGYQFVGPELVDEKVLGIGAGIGLRKED 225 Query: 235 TEWYNIVSWTHYAMV 249 T+ + MV Sbjct: 226 TDLKAKIDRAILDMV 240 >gi|317473005|ref|ZP_07932307.1| extracellular solute-binding protein, family 3 [Anaerostipes sp. 3_2_56FAA] gi|316899514|gb|EFV21526.1| extracellular solute-binding protein, family 3 [Anaerostipes sp. 3_2_56FAA] Length = 269 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 83/257 (32%), Gaps = 19/257 (7%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGINTGLVGFAEVK 51 M K V + ++ + + L +K L G++ Sbjct: 1 MRVKKLLVLCVSAVLAGSMLLAGCSKKEESKTDESLQYVKDNKELILGLDASFPPMGFTD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + GFD+D + ++ + K++ P+N + LQ K ID + T ++ Sbjct: 61 KDQKIVGFDIDMAKEVTKRMG---IKLKLQPINWDSKDQELQGKTIDCIWNGL--TYSKD 115 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + + + Q ++ +K I S+ + + VQ G+T + + N Sbjct: 116 RAKEMLCSESYMDNHQVLLVPEKSKIKSLKDIKKQQVGVQKGSTAADAVDQTKELKN--A 173 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + F EI CDA D + A P + IL D + Sbjct: 174 KIVYFGNNVEILNDLGNG-CDAAVMDE--VVAKYYAKKDPGKFKILNDNLITEKYVIGFR 230 Query: 232 QGDTEWYNIVSWTHYAM 248 GD + V M Sbjct: 231 TGDEKLKAEVEKQLKDM 247 >gi|322387530|ref|ZP_08061139.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Streptococcus infantis ATCC 700779] gi|321141397|gb|EFX36893.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Streptococcus infantis ATCC 700779] Length = 271 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 85/254 (33%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L F + +++S + IK++G L + F V Sbjct: 4 KKWIFVLCSFLASFFLVACQSSSSSSQSAVEAIKQKGKLVVATSPDYAPFEFQALVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEVSSMSFDNVLTSLQTGKADLAIAGISATEERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K + L+ A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKISFLIRKTDLEKYKDLDSLASANIAAQKGTVPESMVKEQLPKA----Q 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E ++ + DA D + N + + + A AI + Sbjct: 175 LTSLTNMGEAVNELQSGKVDAVHMDEPVALSYATKNADLAVATVSLTMKEGEENAVAIKK 234 Query: 233 GDTEWYNIVSWTHY 246 G+++ +V Sbjct: 235 GNSDLKEVVDKVIQ 248 >gi|325848924|ref|ZP_08170434.1| putative arginine ABC transporter, periplasmic arginine-binding protein ArtP [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480568|gb|EGC83630.1| putative arginine ABC transporter, periplasmic arginine-binding protein ArtP [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 268 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 33/257 (12%), Positives = 77/257 (29%), Gaps = 25/257 (9%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILG-------------DIKKRGFLKCGINTGLVGFA 48 K + +++ + + + +I G + G + + Sbjct: 5 KKILLAFVTTTLLVSCSGKNQKGNSNESDLSNNSNKKVSSEIVSDGVIDLGTSADFPPYE 64 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 N G D + + + + + ++ ++ +++S ++D Sbjct: 65 FFDDNNKIVGIDAEIAQEIGKKLGVE---VKIKDMDFSSIIASIESGKLDGGIAGITANE 121 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R+ + F Q I+ K + L G + Q G+T E D + N Sbjct: 122 DRKK--NVNFSDTYGKSVQKVIVKKDSSFKNPEDLKGKKVASQLGSTGETAAKDTYGEEN 179 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 F + + A + DA D N + +L ++K A Sbjct: 180 ----VQSFSKNMDAIVALNNDKVDAVVLDDQVAEKFAAANK---DLKVLDKELAKDEYAI 232 Query: 229 AIIQGDTEWYNIVSWTH 245 A+ + + + V+ Sbjct: 233 ALDKKNDKLLEEVNKAI 249 >gi|167564804|ref|ZP_02357720.1| ABC polar amino acid family transporter, periplasmic ligand binding protein [Burkholderia oklahomensis EO147] gi|167571972|ref|ZP_02364846.1| ABC polar amino acid family transporter, periplasmic ligand binding protein [Burkholderia oklahomensis C6786] Length = 251 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 82/239 (34%), Gaps = 22/239 (9%) Query: 1 MYKDFFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M +S+ C + + S A L+ + NG Sbjct: 1 MKLQRLLSLACFALATTFAGFCGSAAAQTPD------VLRVATDATFAPMEYT-ENGVRT 53 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D AL+ A+ +Q+ ++ K L + + D T R + Sbjct: 54 GFDIDMMNALAKAMGK---SVQWTDIDFKGLIPGLIAHRFDAAISAIYITDERAKV--VD 108 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y G ++ + I +V+ L+G + VQ GT + L D F + + E Sbjct: 109 FAGPYYAGGLVALVKRDSPIKTVADLNGKKVSVQVGTKSVNFLRDNFP----QITRVEVE 164 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +E+ R DA A Y L T +L ++ A+ + + + Sbjct: 165 KNQEMFDLVGIGRADAAVTGKPAAYQLVRTRGG---FRVLDKPLTTEQYGIAVRKDEPQ 220 >gi|163858766|ref|YP_001633064.1| solute-binding protein [Bordetella petrii DSM 12804] gi|163262494|emb|CAP44797.1| probable solute-binding protein [Bordetella petrii] Length = 276 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 96/260 (36%), Gaps = 13/260 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 M + + L+ + +A L +IK+RG L CG F+ G+ Sbjct: 1 MSFKNILKYVPLLACLGVAGVAHADALANIKERGALVCGTLGTSEPFSFQDPKTRQVVGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D C+A++ + ++ ++ R L ++D+++ N W + + + + Sbjct: 61 EIDLCKAIADHLGVK---LEVKMISVAARIPELAGGRVDVVAANLGW--SPDRAKQIDYS 115 Query: 120 PITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y Q ++ + + + + L+G + AG+++E + F+ Sbjct: 116 YQHYVSPQKILIRRDDAGTLKTNADLAGKRVSAVAGSSSEAGAKRLIP----DVTTVTFK 171 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTE 236 A + + + G L K + P + I+ D + P + +G+ Sbjct: 172 DPPTAFMALQQKKVSGFVGSELMLLKFKQDAESSPVKLEIIEDPLFVEPWGIGMAKGEDG 231 Query: 237 WYNIVSWTHYAMVTAEELGI 256 V+ + + ++ + Sbjct: 232 LRTEVNKVLSGLEASGKMQV 251 >gi|15800563|ref|NP_286575.1| glutamine ABC transporter periplasmic protein [Escherichia coli O157:H7 EDL933] gi|15830143|ref|NP_308916.1| glutamine ABC transporter periplasmic protein [Escherichia coli O157:H7 str. Sakai] gi|16128779|ref|NP_415332.1| glutamine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|26246786|ref|NP_752826.1| glutamine ABC transporter periplasmic protein [Escherichia coli CFT073] gi|74311354|ref|YP_309773.1| glutamine ABC transporter periplasmic protein [Shigella sonnei Ss046] gi|82543257|ref|YP_407204.1| glutamine ABC transporter periplasmic protein [Shigella boydii Sb227] gi|89107662|ref|AP_001442.1| glutamine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|91209845|ref|YP_539831.1| glutamine ABC transporter periplasmic protein [Escherichia coli UTI89] gi|110641015|ref|YP_668743.1| glutamine ABC transporter periplasmic protein [Escherichia coli 536] gi|117622992|ref|YP_851905.1| glutamine ABC transporter periplasmic protein [Escherichia coli APEC O1] gi|157158136|ref|YP_001462005.1| glutamine ABC transporter periplasmic protein [Escherichia coli E24377A] gi|157160288|ref|YP_001457606.1| glutamine ABC transporter periplasmic protein [Escherichia coli HS] gi|168749990|ref|ZP_02775012.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4113] gi|168756600|ref|ZP_02781607.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4401] gi|168764282|ref|ZP_02789289.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4501] gi|168767316|ref|ZP_02792323.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4486] gi|168779358|ref|ZP_02804365.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4076] gi|168787027|ref|ZP_02812034.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC869] gi|168799912|ref|ZP_02824919.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC508] gi|170020833|ref|YP_001725787.1| glutamine ABC transporter periplasmic protein [Escherichia coli ATCC 8739] gi|170080470|ref|YP_001729790.1| glutamine ABC transporter periplasmic binding protein [Escherichia coli str. K-12 substr. DH10B] gi|170680496|ref|YP_001742915.1| glutamine ABC transporter periplasmic protein [Escherichia coli SMS-3-5] gi|188494775|ref|ZP_03002045.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli 53638] gi|191166144|ref|ZP_03027978.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli B7A] gi|191173737|ref|ZP_03035260.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli F11] gi|193064406|ref|ZP_03045487.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli E22] gi|194428193|ref|ZP_03060736.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli B171] gi|194438450|ref|ZP_03070540.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli 101-1] gi|195936852|ref|ZP_03082234.1| glutamine ABC transporter periplasmic protein [Escherichia coli O157:H7 str. EC4024] gi|208809600|ref|ZP_03251937.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4206] gi|208814977|ref|ZP_03256156.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4045] gi|208822633|ref|ZP_03262952.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4042] gi|209397153|ref|YP_002269481.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4115] gi|209918058|ref|YP_002292142.1| glutamine ABC transporter periplasmic protein [Escherichia coli SE11] gi|215485898|ref|YP_002328329.1| glutamine ABC transporter periplasmic protein [Escherichia coli O127:H6 str. E2348/69] gi|217326304|ref|ZP_03442388.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. TW14588] gi|218553397|ref|YP_002386310.1| glutamine ABC transporter periplasmic protein [Escherichia coli IAI1] gi|218557716|ref|YP_002390629.1| glutamine ABC transporter periplasmic protein [Escherichia coli S88] gi|218694285|ref|YP_002401952.1| glutamine ABC transporter periplasmic protein [Escherichia coli 55989] gi|218699185|ref|YP_002406814.1| glutamine ABC transporter periplasmic protein [Escherichia coli IAI39] gi|218704189|ref|YP_002411708.1| glutamine ABC transporter periplasmic protein [Escherichia coli UMN026] gi|227884226|ref|ZP_04002031.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Escherichia coli 83972] gi|237707229|ref|ZP_04537710.1| periplasmic glutamine-binding protein [Escherichia sp. 3_2_53FAA] gi|238900070|ref|YP_002925866.1| glutamine transporter subunit [Escherichia coli BW2952] gi|253774186|ref|YP_003037017.1| glutamine ABC transporter periplasmic protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160888|ref|YP_003043996.1| glutamine ABC transporter periplasmic protein [Escherichia coli B str. REL606] gi|254792006|ref|YP_003076843.1| glutamine ABC transporter periplasmic protein [Escherichia coli O157:H7 str. TW14359] gi|256021118|ref|ZP_05434983.1| glutamine ABC transporter periplasmic protein [Shigella sp. D9] gi|256023593|ref|ZP_05437458.1| glutamine ABC transporter periplasmic protein [Escherichia sp. 4_1_40B] gi|260843054|ref|YP_003220832.1| periplasmic glutamine-binding protein GlnH [Escherichia coli O103:H2 str. 12009] gi|260854103|ref|YP_003227994.1| periplasmic glutamine-binding protein GlnH [Escherichia coli O26:H11 str. 11368] gi|260866978|ref|YP_003233380.1| periplasmic glutamine-binding protein GlnH [Escherichia coli O111:H- str. 11128] gi|261225460|ref|ZP_05939741.1| glutamine transporter subunit; periplasmic binding component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261258571|ref|ZP_05951104.1| periplasmic glutamine-binding protein GlnH [Escherichia coli O157:H7 str. FRIK966] gi|291281808|ref|YP_003498626.1| hypothetical protein G2583_1039 [Escherichia coli O55:H7 str. CB9615] gi|293404111|ref|ZP_06648105.1| glnH [Escherichia coli FVEC1412] gi|293409187|ref|ZP_06652763.1| conserved hypothetical protein [Escherichia coli B354] gi|298379893|ref|ZP_06989498.1| glnH [Escherichia coli FVEC1302] gi|300816459|ref|ZP_07096681.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 107-1] gi|300824272|ref|ZP_07104389.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 119-7] gi|300898304|ref|ZP_07116653.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 198-1] gi|300907141|ref|ZP_07124806.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 84-1] gi|300922836|ref|ZP_07138922.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 182-1] gi|300929384|ref|ZP_07144855.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 187-1] gi|300939849|ref|ZP_07154485.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 21-1] gi|300947104|ref|ZP_07161321.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 116-1] gi|300957011|ref|ZP_07169259.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 175-1] gi|300991896|ref|ZP_07179721.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 200-1] gi|300993355|ref|ZP_07180354.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 45-1] gi|301020688|ref|ZP_07184759.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 69-1] gi|301051266|ref|ZP_07198094.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 185-1] gi|301303569|ref|ZP_07209691.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 124-1] gi|301328005|ref|ZP_07221168.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 78-1] gi|301646244|ref|ZP_07246138.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 146-1] gi|306812786|ref|ZP_07446979.1| glutamine ABC transporter periplasmic protein [Escherichia coli NC101] gi|307313779|ref|ZP_07593396.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli W] gi|309798041|ref|ZP_07692417.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 145-7] gi|312969165|ref|ZP_07783372.1| glutamine-binding periplasmic protein [Escherichia coli 2362-75] gi|312970888|ref|ZP_07785067.1| glutamine-binding periplasmic protein [Escherichia coli 1827-70] gi|331646030|ref|ZP_08347133.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli M605] gi|331651820|ref|ZP_08352839.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli M718] gi|331662168|ref|ZP_08363091.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli TA143] gi|331672317|ref|ZP_08373108.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli TA280] gi|331676549|ref|ZP_08377245.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli H591] gi|331682318|ref|ZP_08382937.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli H299] gi|84028666|sp|P0AEQ5|GLNH_ECO57 RecName: Full=Glutamine-binding periplasmic protein; Short=GlnBP; Flags: Precursor gi|84028667|sp|P0AEQ4|GLNH_ECOL6 RecName: Full=Glutamine-binding periplasmic protein; Short=GlnBP; Flags: Precursor gi|84028668|sp|P0AEQ3|GLNH_ECOLI RecName: Full=Glutamine-binding periplasmic protein; Short=GlnBP; Flags: Precursor gi|12513810|gb|AAG55183.1|AE005262_3 periplasmic glutamine-binding protein; permease [Escherichia coli O157:H7 str. EDL933] gi|26107185|gb|AAN79369.1|AE016757_273 Glutamine-binding periplasmic protein precursor [Escherichia coli CFT073] gi|41569|emb|CAA32382.1| unnamed protein product [Escherichia coli K-12] gi|1651365|dbj|BAA35483.1| glutamine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|1787031|gb|AAC73898.1| glutamine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|13360348|dbj|BAB34312.1| permease of periplasmic glutamine-binding protein [Escherichia coli O157:H7 str. Sakai] gi|73854831|gb|AAZ87538.1| periplasmic glutamine-binding protein [Shigella sonnei Ss046] gi|81244668|gb|ABB65376.1| periplasmic glutamine-binding protein [Shigella boydii Sb227] gi|91071419|gb|ABE06300.1| periplasmic glutamine-binding protein; permease [Escherichia coli UTI89] gi|110342607|gb|ABG68844.1| glutamine-binding periplasmic protein precursor [Escherichia coli 536] gi|115512116|gb|ABJ00191.1| glutamine ABC transporter periplasmic-binding protein [Escherichia coli APEC O1] gi|157065968|gb|ABV05223.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli HS] gi|157080166|gb|ABV19874.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli E24377A] gi|169755761|gb|ACA78460.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli ATCC 8739] gi|169888305|gb|ACB02012.1| glutamine transporter subunit; periplasmic binding component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|170518214|gb|ACB16392.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli SMS-3-5] gi|188015745|gb|EDU53867.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4113] gi|188489974|gb|EDU65077.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli 53638] gi|189003061|gb|EDU72047.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4076] gi|189356243|gb|EDU74662.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4401] gi|189363471|gb|EDU81890.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4486] gi|189365671|gb|EDU84087.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4501] gi|189373187|gb|EDU91603.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC869] gi|189377799|gb|EDU96215.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC508] gi|190903753|gb|EDV63468.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli B7A] gi|190905987|gb|EDV65603.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli F11] gi|192928868|gb|EDV82481.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli E22] gi|194413753|gb|EDX30032.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli B171] gi|194422674|gb|EDX38671.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli 101-1] gi|208729401|gb|EDZ79002.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4206] gi|208731625|gb|EDZ80313.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4045] gi|208738118|gb|EDZ85801.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4042] gi|209158553|gb|ACI35986.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4115] gi|209775788|gb|ACI86206.1| permease of periplasmic glutamine-binding protein [Escherichia coli] gi|209775790|gb|ACI86207.1| permease of periplasmic glutamine-binding protein [Escherichia coli] gi|209775792|gb|ACI86208.1| permease of periplasmic glutamine-binding protein [Escherichia coli] gi|209775794|gb|ACI86209.1| permease of periplasmic glutamine-binding protein [Escherichia coli] gi|209775796|gb|ACI86210.1| permease of periplasmic glutamine-binding protein [Escherichia coli] gi|209911317|dbj|BAG76391.1| glutamine ABC transporter substrate binding component [Escherichia coli SE11] gi|215263970|emb|CAS08311.1| glutamine transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|217322525|gb|EEC30949.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli O157:H7 str. TW14588] gi|218351017|emb|CAU96721.1| glutamine transporter subunit ; periplasmic binding component of ABC superfamily [Escherichia coli 55989] gi|218360165|emb|CAQ97714.1| glutamine transporter subunit ; periplasmic binding component of ABC superfamily [Escherichia coli IAI1] gi|218364485|emb|CAR02167.1| glutamine transporter subunit ; periplasmic binding component of ABC superfamily [Escherichia coli S88] gi|218369171|emb|CAR16926.1| glutamine transporter subunit ; periplasmic binding component of ABC superfamily [Escherichia coli IAI39] gi|218431286|emb|CAR12164.1| glutamine transporter subunit ; periplasmic binding component of ABC superfamily [Escherichia coli UMN026] gi|222032541|emb|CAP75280.1| glutamine-binding periplasmic protein [Escherichia coli LF82] gi|226898439|gb|EEH84698.1| periplasmic glutamine-binding protein [Escherichia sp. 3_2_53FAA] gi|227838978|gb|EEJ49444.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Escherichia coli 83972] gi|238861341|gb|ACR63339.1| glutamine transporter subunit [Escherichia coli BW2952] gi|242376603|emb|CAQ31312.1| glnH, subunit of glutamine ABC transporter [Escherichia coli BL21(DE3)] gi|253325230|gb|ACT29832.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972789|gb|ACT38460.1| glutamine ABC transporter periplasmic protein [Escherichia coli B str. REL606] gi|253977009|gb|ACT42679.1| glutamine ABC transporter periplasmic protein [Escherichia coli BL21(DE3)] gi|254591406|gb|ACT70767.1| glutamine transporter subunit; periplasmic binding component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|257752752|dbj|BAI24254.1| periplasmic glutamine-binding protein GlnH [Escherichia coli O26:H11 str. 11368] gi|257758201|dbj|BAI29698.1| periplasmic glutamine-binding protein GlnH [Escherichia coli O103:H2 str. 12009] gi|257763334|dbj|BAI34829.1| periplasmic glutamine-binding protein GlnH [Escherichia coli O111:H- str. 11128] gi|260450042|gb|ACX40464.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli DH1] gi|281177947|dbj|BAI54277.1| glutamine ABC transporter substrate binding component [Escherichia coli SE15] gi|284920663|emb|CBG33726.1| glutamine ABC transporter, substrate-binding protein [Escherichia coli 042] gi|290761681|gb|ADD55642.1| hypothetical protein G2583_1039 [Escherichia coli O55:H7 str. CB9615] gi|291428697|gb|EFF01722.1| glnH [Escherichia coli FVEC1412] gi|291469655|gb|EFF12139.1| conserved hypothetical protein [Escherichia coli B354] gi|294491983|gb|ADE90739.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli IHE3034] gi|298279591|gb|EFI21099.1| glnH [Escherichia coli FVEC1302] gi|300297083|gb|EFJ53468.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 185-1] gi|300305506|gb|EFJ60026.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 200-1] gi|300316204|gb|EFJ65988.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 175-1] gi|300358006|gb|EFJ73876.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 198-1] gi|300398563|gb|EFJ82101.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 69-1] gi|300401108|gb|EFJ84646.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 84-1] gi|300406610|gb|EFJ90148.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 45-1] gi|300420868|gb|EFK04179.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 182-1] gi|300453269|gb|EFK16889.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 116-1] gi|300455283|gb|EFK18776.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 21-1] gi|300462675|gb|EFK26168.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 187-1] gi|300523246|gb|EFK44315.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 119-7] gi|300531149|gb|EFK52211.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 107-1] gi|300841068|gb|EFK68828.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 124-1] gi|300845497|gb|EFK73257.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 78-1] gi|301075515|gb|EFK90321.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 146-1] gi|305853549|gb|EFM53988.1| glutamine ABC transporter periplasmic protein [Escherichia coli NC101] gi|306906419|gb|EFN36933.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli W] gi|307552656|gb|ADN45431.1| glutamine-binding periplasmic protein [Escherichia coli ABU 83972] gi|307627779|gb|ADN72083.1| glutamine ABC transporter periplasmic protein [Escherichia coli UM146] gi|308118371|gb|EFO55633.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 145-7] gi|309701089|emb|CBJ00387.1| glutamine ABC transporter, substrate-binding protein [Escherichia coli ETEC H10407] gi|310336649|gb|EFQ01816.1| glutamine-binding periplasmic protein [Escherichia coli 1827-70] gi|312286567|gb|EFR14480.1| glutamine-binding periplasmic protein [Escherichia coli 2362-75] gi|312945329|gb|ADR26156.1| glutamine ABC transporter periplasmic protein [Escherichia coli O83:H1 str. NRG 857C] gi|315060047|gb|ADT74374.1| glutamine transporter subunit [Escherichia coli W] gi|315135461|dbj|BAJ42620.1| hypothetical protein ECDH1ME8569_0764 [Escherichia coli DH1] gi|315257800|gb|EFU37768.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 85-1] gi|315287249|gb|EFU46661.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 110-3] gi|315292567|gb|EFU51919.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 153-1] gi|315299343|gb|EFU58595.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 16-3] gi|315619815|gb|EFV00334.1| glutamine-binding periplasmic protein [Escherichia coli 3431] gi|320192712|gb|EFW67353.1| Glutamine ABC transporter, periplasmic glutamine-binding protein [Escherichia coli O157:H7 str. EC1212] gi|320196693|gb|EFW71316.1| Glutamine ABC transporter, periplasmic glutamine-binding protein [Escherichia coli WV_060327] gi|320199000|gb|EFW73597.1| Glutamine ABC transporter, periplasmic glutamine-binding protein [Escherichia coli EC4100B] gi|320637674|gb|EFX07466.1| glutamine ABC transporter periplasmic protein [Escherichia coli O157:H7 str. G5101] gi|320642800|gb|EFX12001.1| glutamine ABC transporter periplasmic protein [Escherichia coli O157:H- str. 493-89] gi|320648256|gb|EFX16911.1| glutamine ABC transporter periplasmic protein [Escherichia coli O157:H- str. H 2687] gi|320654093|gb|EFX22161.1| glutamine ABC transporter periplasmic protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659716|gb|EFX27272.1| glutamine ABC transporter periplasmic protein [Escherichia coli O55:H7 str. USDA 5905] gi|320664187|gb|EFX31338.1| glutamine ABC transporter periplasmic protein [Escherichia coli O157:H7 str. LSU-61] gi|323155821|gb|EFZ41990.1| glutamine-binding periplasmic protein [Escherichia coli EPECa14] gi|323159630|gb|EFZ45609.1| glutamine-binding periplasmic protein [Escherichia coli E128010] gi|323165732|gb|EFZ51518.1| glutamine-binding periplasmic protein [Shigella sonnei 53G] gi|323172272|gb|EFZ57910.1| glutamine-binding periplasmic protein [Escherichia coli LT-68] gi|323175569|gb|EFZ61164.1| glutamine-binding periplasmic protein [Escherichia coli 1180] gi|323185033|gb|EFZ70399.1| glutamine-binding periplasmic protein [Escherichia coli 1357] gi|323190939|gb|EFZ76206.1| glutamine-binding periplasmic protein [Escherichia coli RN587/1] gi|323379394|gb|ADX51662.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli KO11] gi|323938166|gb|EGB34426.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1520] gi|323942684|gb|EGB38849.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E482] gi|323947103|gb|EGB43115.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H120] gi|323953526|gb|EGB49392.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H252] gi|323958100|gb|EGB53809.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H263] gi|323963058|gb|EGB58629.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H489] gi|323967413|gb|EGB62834.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli M863] gi|323969549|gb|EGB64838.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TA007] gi|323976803|gb|EGB71891.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TW10509] gi|324009685|gb|EGB78904.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 57-2] gi|324013078|gb|EGB82297.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 60-1] gi|324018492|gb|EGB87711.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 117-3] gi|324116235|gb|EGC10157.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1167] gi|326338301|gb|EGD62130.1| Glutamine ABC transporter, periplasmic glutamine-binding protein [Escherichia coli O157:H7 str. 1125] gi|326346279|gb|EGD70017.1| Glutamine ABC transporter, periplasmic glutamine-binding protein [Escherichia coli O157:H7 str. 1044] gi|327253598|gb|EGE65227.1| glutamine-binding periplasmic protein [Escherichia coli STEC_7v] gi|330910555|gb|EGH39065.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Escherichia coli AA86] gi|331044782|gb|EGI16909.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli M605] gi|331050098|gb|EGI22156.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli M718] gi|331060590|gb|EGI32554.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli TA143] gi|331070512|gb|EGI41876.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli TA280] gi|331075238|gb|EGI46536.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli H591] gi|331079949|gb|EGI51128.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli H299] gi|332104697|gb|EGJ08043.1| periplasmic glutamine-binding protein [Shigella sp. D9] Length = 248 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 83/245 (33%), Gaps = 20/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 53 LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + D + A +G E + V Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKGSDELRDKV 222 Query: 242 SWTHY 246 + Sbjct: 223 NGALK 227 >gi|325062715|gb|ADY66405.1| amino acid ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 300 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 99/285 (34%), Gaps = 10/285 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + +L + L T + + L I + G ++ G + F+ + + Sbjct: 1 MQRSTLWLMLGVFSLLPTIAAADETQPPTLETIARTGTIRLGFADRNLPFSYMGIGPEPI 60 Query: 58 GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ ++ C ++ + KI ++ R L ID+ + T R Sbjct: 61 GYSIELCLKVADSIKKKLGLPELKIDFVKRTPSNRITLLNDGTIDMECVASTNTEERRK- 119 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + G ++ K ++SVS L+G ++ V GT L + + Sbjct: 120 -AVWFSYSHFITGTRYVALKSSNMTSVSDLAGRTVVVTTGTINISQLNVLNRKLGLNIAV 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQ 232 + + E R A+ D L + +P ++ I + + P + + Sbjct: 179 LQNDSTEGSFDMVTEDRASAFVMDDILLRSFVAETGKPEDYSISNEYLAPPQPYGLMLRR 238 Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 GDT + N V+ + + E+ +++R L Sbjct: 239 GDTAFKNAVNEALGKIYASGEINAIYDKWFNAPIPPNGINLKRPL 283 >gi|323142757|ref|ZP_08077472.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Succinatimonas hippei YIT 12066] gi|322417470|gb|EFY08089.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Succinatimonas hippei YIT 12066] Length = 283 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 73/257 (28%), Gaps = 13/257 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + L ++ S + G + F + G+ GFD Sbjct: 19 MQRLLRFFAMGLCAAVISTSSAAEGGTDA--NNKVWRVGCDAAFAPFTFTDSKGELIGFD 76 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RA+ + + + L + ID++ T R + F Sbjct: 77 VDLIRAMGKSRGVE---VSIKSYPFDSIIPTLITDNIDLIISGFTITPERAE--RVDFSD 131 Query: 121 ITYFDGQGF--IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G F + ++ L A ICVQ GT+ + L F Sbjct: 132 PYYRCGLTFLTLTENADKYKTLEDLKDAEICVQLGTSGAVFLEKAMP----NAKIKRFNS 187 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E C A D +T+ R A+ +GD + Sbjct: 188 PPETYLELIGKGCAAVLNDRPVNDYFMVTSGRKDIVSRNITTDDSEYYGIAMRKGDKQMV 247 Query: 239 NIVSWTHYAMVTAEELG 255 ++V+ + E Sbjct: 248 DLVNKALKDVQENGEFE 264 >gi|260597204|ref|YP_003209775.1| glutamine ABC transporter periplasmic protein [Cronobacter turicensis z3032] gi|260216381|emb|CBA29431.1| Glutamine-binding periplasmic protein [Cronobacter turicensis z3032] Length = 293 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 85/245 (34%), Gaps = 21/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F L + L F S A L +T V F + + + GFDVD Sbjct: 48 KSVFKVSLAALTLAFAVSSQAAD---------KLVVATDTAFVPFEFKQGD-KYVGFDVD 97 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 98 LWAAIAKELKLDY---TLKPMDFSGIIPALQTKNVDVALAGITITDERKK--AIDFSDGY 152 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 153 YTSGLLVMVKANNNDVKSVKDLDGKVLAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 208 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + + ++ A +G + N V Sbjct: 209 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGESLAGQQYGIAFPKGSDDLRNKV 267 Query: 242 SWTHY 246 + Sbjct: 268 NGALK 272 >gi|260463006|ref|ZP_05811209.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|259031127|gb|EEW32400.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] Length = 262 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 88/245 (35%), Gaps = 11/245 (4%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + + L + + +A L DI KRG L+ + T F+ V ANG+ G V+ Sbjct: 2 KIARLFIAGLALAGLTTAASAGALDDITKRGELRVAVQTQGPPFSLVGANGERTGSSVEL 61 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 ++ + + + + + AL S + D+L + TL R + +AF Sbjct: 62 AELMAKEMGVKITFLDF---DWDGLIPALLSGKADLLVADMTPTLAR--GMKVAFTTPYM 116 Query: 124 FDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + G + G I V G T E F ++K Sbjct: 117 YTGSTVFTKADSKFKTTEDCKAKGTKIAVLLGATGEKEAKAAFPDADIKS---YKGGGPL 173 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + A + D D+SA+ + I+PD++SK PLA A + + + Sbjct: 174 LLDAVNNGQADCGVNDVSAVKGQSTAYPAGT-FTIMPDLLSKEPLAFATRYDEPDLLVWM 232 Query: 242 SWTHY 246 + Sbjct: 233 NLFLN 237 >gi|225574973|ref|ZP_03783583.1| hypothetical protein RUMHYD_03052 [Blautia hydrogenotrophica DSM 10507] gi|225037820|gb|EEG48066.1| hypothetical protein RUMHYD_03052 [Blautia hydrogenotrophica DSM 10507] Length = 282 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 72/259 (27%), Gaps = 25/259 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS----------------ILGDIKKRGFLKCGINTGL 44 M + + +L ++ S DI G G + Sbjct: 1 MKRRAIIVLLAAVMTVGVFAGCKGSNESDSAKTEETADGGESKDDILGDGVFTVGFDAEY 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F + G++ GFD+D RA+ A P+N + L S ID + Sbjct: 61 PPFGYMDDTGEYVGFDLDLARAVCEAKGWKFEA---KPVNWDAKDSELNSGTIDCIWNGF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA--D 162 + + + Q + GI S+ L+G ++ VQA + L D Sbjct: 118 TINGRED---DYTWTEPYLNNEQVIVAKADAGIESLDDLAGKAVVVQAASAALDALNNDD 174 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 + DA DI + VIL + I Sbjct: 175 NKALAESFGSLTENPDYNTAFMNLESGAADAVAIDIGVANYQLSQREEG-AFVILDEPIQ 233 Query: 223 KSPLAPAIIQGDTEWYNIV 241 +G+ + V Sbjct: 234 SEQYGIGFKKGNDALKDAV 252 >gi|121604395|ref|YP_981724.1| extracellular solute-binding protein [Polaromonas naphthalenivorans CJ2] gi|120593364|gb|ABM36803.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 268 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 81/240 (33%), Gaps = 10/240 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + + +A + DIKK+G L G+ + + ++ G+D D R L+ + Sbjct: 24 SAWAPAASAQSVADIKKKGELTVGMLVDFPPYGTMNSSNQPDGYDADVARLLAKDLGVK- 82 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 + +P+ R L + ++D+L + T R + F KK Sbjct: 83 --VNLVPVTGPNRIPFLLTNKVDLLVASLAVTPERAKQVQ--FSKPYAAASIVLYGDKKA 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + + + L G + V +T ++ L F+ A + + DA Sbjct: 139 SLKAPADLKGKRVGVARASTQDIALTAAAPE---GTEIRRFDDDASAMQALLSGQIDAI- 194 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 S A ++ P+ ++ + + A+ G E V EL Sbjct: 195 -GCSTTVAAQIAKRAPANTFENKFVLRQQVMGVAMRPGQAELLKTVDDFVARNTANGELN 253 >gi|315038756|ref|YP_004032324.1| amino acid ABC transporter periplasmic protein [Lactobacillus amylovorus GRL 1112] gi|312276889|gb|ADQ59529.1| amino acid ABC transporter periplasmic protein [Lactobacillus amylovorus GRL 1112] Length = 286 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 56/263 (21%), Positives = 99/263 (37%), Gaps = 30/263 (11%) Query: 2 YKDF--FVSILCLIILFFTS----------------FSTNASILGDIKKRGFLKCGINTG 43 K F +S++ +++ ++ +N + + IK+RG+++ G+ Sbjct: 4 RKIFNTIISVIAAVVVLASAYMGLTKPYLARSAGGGGWSNNNSVTQIKRRGYIRIGVYGD 63 Query: 44 LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 L + V + G GFD+ R L+ + P ++ LN R AL S ++D++ N Sbjct: 64 LPPYGWVNSQGKRVGFDLRLARELAKELGVKP---RFTQLNGNNRVDALNSDKVDMVLAN 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R + F G + K I+S QL G + + G+T E A Sbjct: 121 FTKTPERAEV--VDFAHPYMKVSTGVVSPKSHPITSEKQLRGKQLILLKGSTGENYFAKR 178 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + F+ + A + R A D S LYA P V + I Sbjct: 179 -----PGIKLLRFDSETQQFNAMKNKRGAALADDNSYLYAWI--KKNPQYVVGIRSIGPH 231 Query: 224 SPLAPAIIQGDTEWYNIVSWTHY 246 +APA+ +G+ + Sbjct: 232 QFIAPAVKKGNKSLLKWTNKQIN 254 >gi|257461101|ref|ZP_05626199.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257441475|gb|EEV16620.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 267 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 96/246 (39%), Gaps = 19/246 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++ LF A+ L IK++G ++ GI+ L + V +G + GF+ Sbjct: 1 MKKIIFALLIASCSLF-------ANSLAQIKEKGLIRIGIDGSLPPLS-VSEDGKYSGFE 52 Query: 61 VDFCRALSSAIFDD-PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + LS IF D KI+Y+ +R A+Q ++D+ T RE + F Sbjct: 53 ISLIEELSKEIFGDKGGKIEYVVTLGNDRITAVQDNKVDLDIAAITVTKEREKL--VDFS 110 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + I +V L I + GTT + + I Sbjct: 111 NPYFSVNIGVLTRTDDNIKTVDDLQDKEILAEPGTTAFDYF------NKEGFKVISCASS 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A ++ R Y D + + + + V + ++ + LA A+ +G+ + N Sbjct: 165 SECFRALKSGRGSGYADDNMVVLGYSVVDRK--VEVNIKNLGTTDFLAIAVQKGNDDLLN 222 Query: 240 IVSWTH 245 ++ Sbjct: 223 ALNDGL 228 >gi|228941316|ref|ZP_04103869.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974248|ref|ZP_04134818.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980839|ref|ZP_04141144.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis Bt407] gi|228779008|gb|EEM27270.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis Bt407] gi|228785588|gb|EEM33597.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228818475|gb|EEM64547.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326941934|gb|AEA17830.1| arginine-binding protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 259 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 89/254 (35%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N + L G + + V+A+ + G Sbjct: 1 MKKLVSISFALILIVSIFSACSNGESKETKGNKKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|78065025|ref|YP_367794.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77965770|gb|ABB07150.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 266 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 14/232 (6%) Query: 17 FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHADDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLGVKT 78 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 Q++P LQ+ + D++ T R+ L F + I K Sbjct: 79 ---QFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKE--ALDFSEPYTYSAAQLIQRKDD 133 Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 S+ G + V GT D + E A R +A Sbjct: 134 TRNFKSLDDFKGKKLGVTLGTNY-----DQMARTVPGIEVQTYPGAPEKLRDLAAGRIEA 188 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D L + T++ P + + + +A +G+ ++ ++ Sbjct: 189 TLDDRLMLPYMIKTSNLPLRAGAVLNGGKQE-MAIPFRKGNPKFEKAINDAL 239 >gi|294794911|ref|ZP_06760046.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Veillonella sp. 3_1_44] gi|294454273|gb|EFG22647.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Veillonella sp. 3_1_44] Length = 270 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 88/270 (32%), Gaps = 17/270 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K V + + ++ F + + + + + G++ G+ G D+ Sbjct: 4 KKMMAVGLAAVSMMAFVTGCGGDAKKANTELPKKIVIGLDDSFPPMGFKDDKGEIVGLDI 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + + D +++ ++ + L+SK+ID L + RE + F Sbjct: 64 DMAKEAAKRAGMD---VEFKAIDWSSKEAELKSKKIDALWNGLTVSPEREK--NILFSNT 118 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 D Q I+ I + L+G + VQ +T E L + + + Sbjct: 119 YMKDKQYIIVRNDDDSIKGKADLAGKVVGVQQASTGEAALQND-PSGKTVKETKSYADFV 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYN 239 R DA D A L P ++ I+ A + DT + Sbjct: 178 SAFMDLGIGRVDAVIADGVI--ARYLMTKEPGKYKIVEGTDYGVDNFAVGFRKDDTALRD 235 Query: 240 IVSWTH-------YAMVTAEELGITQKNIN 262 ++ A AE+ + +++ Sbjct: 236 KINGILAEMKKDGTADKIAEKWLGSGADLD 265 >gi|16330280|ref|NP_441008.1| hypothetical protein sll1762 [Synechocystis sp. PCC 6803] gi|1652769|dbj|BAA17688.1| sll1762 [Synechocystis sp. PCC 6803] Length = 382 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 88/250 (35%), Gaps = 12/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F + + L++ + + A + I + G L G N V F+ + N + G+ Sbjct: 84 MLKQFSATFIGLLLATVGAQAAIAETVMEKIIRTGNLTIGANLDNVPFSYINDNNEVVGY 143 Query: 60 DVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +D + + D + + L++ ++DI+ +T +T R+ Sbjct: 144 SIDIADRIREEVGKELGRDVVLQIVEVQDMSDALPKLKTGELDIVC-DTAFTWERDRY-- 200 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G ++ I+S L G + + T + D K + + Sbjct: 201 VDFTVSYAVAGIQLLVPNDTPINSRETLMGRRVAMVPNT----IVEDAVKIVQNEIEVVP 256 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 V A + DA GD L L+ D P VI ++ + + + + Sbjct: 257 VTSVRAGMEALKKGTVDAVAGDGIQLAGLRQVLDMPDTKVIPQPAETRYGVGCMVREDNP 316 Query: 236 EWYNIVSWTH 245 + + + Sbjct: 317 GFLRLANRAL 326 >gi|315222684|ref|ZP_07864573.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus anginosus F0211] gi|315188370|gb|EFU22096.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus anginosus F0211] Length = 277 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 38/255 (14%), Positives = 82/255 (32%), Gaps = 14/255 (5%) Query: 1 MY-KDFFVSILCLII-LFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K + ++I LI+ L T+ S + +++ + G + V + NG Sbjct: 1 MKIKRYVLAICGLILFLLLTACSNVSNPKVDNWSKYQQKKSITIGFDNTFVPMGFEQKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D A+ K+ + P++ + L + ID++ T R Sbjct: 61 QYVGFDIDLANAVFKEYG---IKVNWQPIDWDMKETELTNGTIDLIWNGYSATDERRK-- 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY---FKAHNMKY 171 + F + Q + K I+ + + + Q G++ + K + Sbjct: 116 KVQFTIPYMKNEQVLVTKKSSNIAKTADMKDKILGAQTGSSGYDEFEAHPELLKNLVKNH 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ E + R D D ++ + P A Sbjct: 176 KAAQYQSFTEALIDLQNSRIDGLLIDRVYANYYLKEEGILQDYYVFPAGFDSESFAVGAR 235 Query: 232 QGDTEWYNIVSWTHY 246 + D + ++ Sbjct: 236 KTDKQLVENINQAFK 250 >gi|332074975|gb|EGI85447.1| bacterial extracellular solute-binding s, 3 family protein [Streptococcus pneumoniae GA41301] Length = 271 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L I F + + + S + IK++G L + F V Sbjct: 4 KKWIFVLCNFLAIFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E + + DA D + N + + + A A+ + Sbjct: 175 LTSLTNMGEAVNELQVGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234 Query: 233 GDTEWYNIVSWTHY 246 + +V Sbjct: 235 NSDDLKEVVDKVIQ 248 >gi|317047481|ref|YP_004115129.1| cationic amino acid ABC transporter periplasmic-binding protein [Pantoea sp. At-9b] gi|316949098|gb|ADU68573.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. At-9b] Length = 248 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 86/245 (35%), Gaps = 20/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + + L F+ ST A L +T V F + + + GFD+D Sbjct: 2 KSLIKVSVAALALAFSLSSTAAD--------KKLVVATDTAFVPFEFKQGD-QYVGFDID 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ++ +D+ T R+ + F Sbjct: 53 LWAAIAKELKLDY---TLKPMDFSGIIPALQTRNVDVALAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ I S+ L+G + V++GT + DY KAH F ++ Sbjct: 108 YKSGLLVMVRSNENNIKSIDDLNGKVVAVKSGTGSV----DYAKAHIKSKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + + IS A +G + V Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIHTAGKGR-FKAVGESISAQQYGIAFPKGSDDLREKV 222 Query: 242 SWTHY 246 + Sbjct: 223 NGALK 227 >gi|70729620|ref|YP_259359.1| arginine/ornithine ABC transporter periplasmic arginine/ornithine-binding protein [Pseudomonas fluorescens Pf-5] gi|68343919|gb|AAY91525.1| arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein [Pseudomonas fluorescens Pf-5] Length = 259 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 86/265 (32%), Gaps = 22/265 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L + FT+ + A ++ GI G F+ +G GFD Sbjct: 1 MNKFALFGALALSLFSFTASADEA---------KPIRIGIEAGYPPFSMKTPDGKLTGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K ++ AL+ K+ID + + T R+ + F Sbjct: 52 VDLGNALCEQM---QAKCTWVEQEFDGLIPALKVKKIDAILSSMTITDDRKK--NVDFTI 106 Query: 121 ITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y F+M I ++L G + V +T + + + + + Sbjct: 107 KYYHTPARFVMKAGTSIKDPLTELKGKKVGVLRASTHDRFATEVLVPAGID--LVRYGSQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +E + + R DA D L L D + + A+ +GD Sbjct: 165 QEANLDMVSGRVDALLADSVNLDDGFLKTDAGKGFAFVGPEYNDPKYFGGGAGIAVRKGD 224 Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259 E + + + Q Sbjct: 225 QELAGKFNKAITEIRANGKYKQVQD 249 >gi|159037032|ref|YP_001536285.1| extracellular solute-binding protein [Salinispora arenicola CNS-205] gi|157915867|gb|ABV97294.1| extracellular solute-binding protein family 3 [Salinispora arenicola CNS-205] Length = 294 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 86/227 (37%), Gaps = 9/227 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 S + + + +K G GF +G+ +GFDV+ + ++ + KI+++ Sbjct: 41 AAGSTMERLNEAQAIKIGTKFDQPGFGLKGLSGEPEGFDVEVAKIIAKELGIPEDKIEWV 100 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 +K R + ++ +D+++ R+ + F Y GQ ++ K + Sbjct: 101 EAPSKVREDVIVNETVDLVAATYTINPKRKERIA--FAGPYYEAGQNIMVRKDDTSITGP 158 Query: 142 QLS---GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 +C G+T + Y K ++ ++F+ ++ A + DA T D Sbjct: 159 DSFADGTKKVCSVTGSTPAEEIRTYVK--DVSSQLVLFDTYDKCRDALNGGQVDAVTTDN 216 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L + + + +K P + + D E+ + V+ Sbjct: 217 VILLGYIA--KDEASFKLAGENFTKEPYGIGVKKDDAEFRDFVNDVL 261 >gi|17549152|ref|NP_522492.1| amino-acid-binding periplasmic ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17431403|emb|CAD18082.1| probable amino-acid-binding periplasmic abc transporter protein [Ralstonia solanacearum GMI1000] Length = 280 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 92/249 (36%), Gaps = 13/249 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRAL 67 + L L SF A +I+K L+CG + FA + GFDVD C+AL Sbjct: 10 LTVLACLCAASFPVLADQWAEIQKNKALRCGTFADVPPFAAPDPKTREMVGFDVDLCQAL 69 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + + PL+ + R ++ ++D+ N +TL R + F Y + Sbjct: 70 ARHLG---VAARITPLSVEARVPEVKMGRVDVTVANLAYTLGRAEQIQ--FSDPYYLAKE 124 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + S + G + G+T+EL++ P+ F+ A + Sbjct: 125 MLAVRASDPGKSKADYKGKRLAAAKGSTSELSI------KMNGSEPVTFQDTGSAYMAVQ 178 Query: 188 AHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + L + E ++ + + P+ + +G+ V+ Sbjct: 179 QGKALGIVSNTMTITKLVNQSKTGGIELKMIAEPMIYQPIGVGMKKGEPALLAKVNEALL 238 Query: 247 AMVTAEELG 255 AM A E+ Sbjct: 239 AMDKAGEIN 247 >gi|170731786|ref|YP_001763733.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|254246506|ref|ZP_04939827.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] gi|124871282|gb|EAY62998.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] gi|169815028|gb|ACA89611.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 266 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 14/232 (6%) Query: 17 FTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 FT+ + +A +L +KK G L+ G+ F +G +GFDVD A++ + Sbjct: 19 FTAVAAHADDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLGVKT 78 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 Q++P LQ+ + D++ T R+ L F + I K Sbjct: 79 ---QFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKE--ALDFSEPYTYSAAQLIQRKDD 133 Query: 136 --GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 S+ G + V GT D + E A R +A Sbjct: 134 TRNFKSLDDFKGKKLGVTLGTNY-----DQMARTVPGIEVQTYPGAPEKLRDLAAGRIEA 188 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D L + T++ P + + + +A +G+ ++ ++ Sbjct: 189 TLDDRLMLPYMIKTSNLPLRSGAVLNGGKQE-MAIPFRKGNPKFEKAINDAL 239 >gi|319651468|ref|ZP_08005596.1| hypothetical protein HMPREF1013_02208 [Bacillus sp. 2_A_57_CT2] gi|317396783|gb|EFV77493.1| hypothetical protein HMPREF1013_02208 [Bacillus sp. 2_A_57_CT2] Length = 263 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 49/217 (22%), Positives = 83/217 (38%), Gaps = 14/217 (6%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVK-ANG 54 M K F +SIL + +L S AS + + L G + F V A G Sbjct: 1 MKKVIMFALSILLVGVLAACGTSEEASTGSGSGENSDKKVLTMGTSADYPPFEYVDSAKG 60 Query: 55 -DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFDVD +A++ + + IQ ++ AL++ Q+D + T R+ Sbjct: 61 EEIIGFDVDLAKAIAEKLGYE---IQVKDMDFNGLIPALETNQVDFVLSGMTPTEERK-- 115 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + Y + K GI S+ L+G ++ VQ + + + +MK Sbjct: 116 QNVDFSDVYYTASHMIVSKKGSGIESLEDLNGKTLGVQLASIQADKAEEIGETVDMKVEN 175 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 R+ E+ A R DA + N+ Sbjct: 176 R--NRIPELIQEIMADRFDAAMIEDIVAKGYFEKNED 210 >gi|330812507|ref|YP_004356969.1| putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380615|gb|AEA71965.1| putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 261 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 87/261 (33%), Gaps = 11/261 (4%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + L L +A L D+ KRG LK + F V + +G Sbjct: 1 MIQRCSALLTALFASLMLCQLPAHADGLEDVVKRGTLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + F Sbjct: 61 DIDTAKLLADQL---KVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPEREKV--IDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+++ L G +I V G ++ L FE Sbjct: 116 SAYAPFYLAVFGPPDAAINNLDDLKGKTISVTRGAIEDIELTKVAPE---GTTIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY A + D + A ++ P L + SP+ + + + Sbjct: 173 NSTIAAYLAGQVDLIASGNVVMVA--ISERNPKRVPALKVKLKDSPVYVGVNKNEPALLE 230 Query: 240 IVSWTHYAMVTAEELGITQKN 260 V+ T L + Sbjct: 231 KVNQILATAKTDGSLEKNSQT 251 >gi|288870949|ref|ZP_06115884.2| amino acid ABC transporter, amino acid-binding protein [Clostridium hathewayi DSM 13479] gi|288865282|gb|EFC97580.1| amino acid ABC transporter, amino acid-binding protein [Clostridium hathewayi DSM 13479] Length = 313 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 76/215 (35%), Gaps = 8/215 (3%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G G + V +G++ GFD++ ++ + + P++ + + L+ Sbjct: 84 GTFTVGFDQEFPPMGYVGDDGEYTGFDLEVAEEVAKRLGMEFVP---QPVDWAAKDMELE 140 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 S ID + T + + + Q F++ + GI +++ L+G + VQA Sbjct: 141 SGNIDCIWNGFTMTGRED---DYTWTEAYMANQQVFVVTAESGIKTLADLAGKVVEVQAE 197 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 ++ E L D + DA D + A R + Sbjct: 198 SSAEAALKDDPNLTGTFGTLQSTPDYNTAFMDLQMGAVDAIAMDE--VVARFQIEQRQVD 255 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 ++L + ++ A +G+ + V A+ Sbjct: 256 FIVLDETLAAENYAVGFKKGNDALKDQVQAQLEAL 290 >gi|218705840|ref|YP_002413359.1| lysine/arginine/ornithine ABC transporter periplasmic-binding protein [Escherichia coli UMN026] gi|293405776|ref|ZP_06649768.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli FVEC1412] gi|298381459|ref|ZP_06991058.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli FVEC1302] gi|300896992|ref|ZP_07115471.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 198-1] gi|218432937|emb|CAR13831.1| lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli UMN026] gi|291427984|gb|EFF01011.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli FVEC1412] gi|298278901|gb|EFI20415.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli FVEC1302] gi|300359173|gb|EFJ75043.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 198-1] Length = 260 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 89/279 (31%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + + S ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSILALSLLVGLSAAASCYAALPE--------TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E + +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTVDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L + + + + D Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257 >gi|171779921|ref|ZP_02920825.1| hypothetical protein STRINF_01708 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281269|gb|EDT46704.1| hypothetical protein STRINF_01708 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 274 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 86/260 (33%), Gaps = 14/260 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 M+ + ++ S + + + DIK +G L +N F V Sbjct: 8 MFGGLALVASAFLLTACGSGNQKDTSVSDIKDKGTLVVAMNPEFAPFEFKTLVDGKDTIV 67 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV+ +A+ + +++ ++ +LQS + D+ T R+ Sbjct: 68 GADVEIAKAIGEELGVK---VKFSSMSFNNVLASLQSGKADVAISGISATPERKK--AYN 122 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y ++ K + S L+G S+ Q G+ E ++ K + Sbjct: 123 FSEAYYESENVVLIKKTDVDKYTKTSSLAGLSVGTQKGSIQENVASEQLK----GSKVVA 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E+ + + A + ND + I A A+ +GD Sbjct: 179 LTQNGEMINELKNGQIQAVVLEKPIAEGYAANNDDLTIANIKLKNDDADAYAVALPKGDD 238 Query: 236 EWYNIVSWTHYAMVTAEELG 255 + V+ + + ++ Sbjct: 239 KLTKEVNKVIKDLKDSGKID 258 >gi|330501280|ref|YP_004378149.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01] gi|328915566|gb|AEB56397.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01] Length = 261 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 91/246 (36%), Gaps = 11/246 (4%) Query: 1 MYKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + L L F + + +A L DI K G LK + F V + +G Sbjct: 1 MRKFHRTLLGTLFAALAFGASTAHADALEDISKAGVLKVAVPQDFPPFGSVGPDMKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + K++ P+N+ R L + ++D++ + RE + F Sbjct: 61 DIDTAQLLADKL---AVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPEREAV--IDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G I+S+ L+G +I V G+ ++ L++ FE Sbjct: 116 AAYAPFYLGVFGPDDAAIASLDDLAGKTISVTRGSIEDIELSNVAPK---GATIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY + + + + A+ + P + + SP+ + + + Sbjct: 173 NSTIAAYLSGQVELIASGNVVMVAI--SEKNPKRVPSMKLKLKDSPVYVGVNKNQAALLD 230 Query: 240 IVSWTH 245 V+ Sbjct: 231 KVNAII 236 >gi|330809826|ref|YP_004354288.1| putative histidine-binding periplasmic protein precursor [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377934|gb|AEA69284.1| putative histidine-binding periplasmic protein precursor [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 260 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 75/240 (31%), Gaps = 22/240 (9%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + L ++ F TS S L+ GI FA + GFD Sbjct: 4 KRIALKLGLVSLLAFGTSLQAAESS---------LRIGIEAAYPPFASKTPDNAIVGFDY 54 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +AL + + + + AL+ K++D + + T R + F Sbjct: 55 DIGQALCAEM---KVRCVWQEQEFDGLIPALKVKKVDAVISSMSITPER--LKSVDFTDR 109 Query: 122 TYFDGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + K GI+ +QL G I VQ T + + D F + + Sbjct: 110 YYRIPARLVFRKGSGINDIPAQLKGKRIGVQRATNFDRYVTDRFAPAG--AEVVRYGSQN 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 EI R DA + L + + ++ A+ + DT Sbjct: 168 EIFLDLLGGRLDATMASSVVIDESLLKRPEGKDFEFVGPNFTEEQYFGTGIGIAVRKNDT 227 >gi|295107461|emb|CBL05004.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Gordonibacter pamelaeae 7-10-1-b] Length = 274 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 81/235 (34%), Gaps = 17/235 (7%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73 + + + L+ G + GF G+ +G +VD R L+ I Sbjct: 25 IALAGCAPDGD---------VLRVGTKIDVPGFGFQNPETGNIEGMEVDIARELAKRIKG 75 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 DP+ +Q +N R L + +D T R+ F Y D G ++ K Sbjct: 76 DPNALQVTGVNVTTRGAMLDNGTLDATLATFTITEARKK--SYNFSRPYYTDHIGVLVKK 133 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 GI+ ++ L G ++ V TT L + + E+ A R DA Sbjct: 134 SSGITDLADLDGKTVGVALSATTRDKLTAAGDEIGIHMKFAEYSTYPEVKIALVTGRVDA 193 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 ++ D S L ++L + A + +T+ + + AM Sbjct: 194 FSVDRSILNGYV-----DDSTMLLDAQFAPQEYGVATKKSNTQLADQIDAAIGAM 243 >gi|212697318|ref|ZP_03305446.1| hypothetical protein ANHYDRO_01886 [Anaerococcus hydrogenalis DSM 7454] gi|212675767|gb|EEB35374.1| hypothetical protein ANHYDRO_01886 [Anaerococcus hydrogenalis DSM 7454] Length = 268 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 36/261 (13%), Positives = 80/261 (30%), Gaps = 28/261 (10%) Query: 1 MY--KDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGL 44 M K ++ + +L S ++N + +I G + G + Sbjct: 1 MKNLKKILLAFVTTTLLVSCSGKDQKGNSNESDLSNNSNKKVSSEIVSDGVIDLGTSADF 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 + N G D + + + + + ++ ++ +++S ++D Sbjct: 61 PPYEFFDDNNKIVGIDAEIAQEIGKKLGVE---VKIKDMDFSSIIASIESGKLDGGIAGI 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 R+ + F Q I+ K + L G + Q G+T E D + Sbjct: 118 TANEDRKK--NVNFSDTYGKSVQKVIVKKDSSFKNPEDLKGKKVASQLGSTGEAAAKDTY 175 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 F + + A + DA D N + +L ++K Sbjct: 176 GE----EKVQSFSKNMDAIVALNNDKVDAVVLDDQVAEKFAAANK---DLKVLDKELAKD 228 Query: 225 PLAPAIIQGDTEWYNIVSWTH 245 A A+ + + + V+ Sbjct: 229 EYAIALDKKNDKLLEEVNKAI 249 >gi|167745443|ref|ZP_02417570.1| hypothetical protein ANACAC_00134 [Anaerostipes caccae DSM 14662] gi|167655164|gb|EDR99293.1| hypothetical protein ANACAC_00134 [Anaerostipes caccae DSM 14662] Length = 269 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 82/257 (31%), Gaps = 19/257 (7%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGINTGLVGFAEVK 51 M K V + ++ + + L +K L G++ Sbjct: 1 MRVKKLLVLCVSAVLAGSMLLAGCSKKEESKTDESLQYVKDNKELILGLDASFPPMGFTD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + GFD+D + ++ + K++ P+N + LQ K ID + T + Sbjct: 61 KDQKIVGFDIDMAKEVTKRMG---IKLKLQPINWDSKDQELQGKTIDCIWNGL--TYSED 115 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + + + Q ++ +K I S+ + + VQ G+T + + N Sbjct: 116 RAKEMLCSESYMDNHQVLLVPEKSKIKSLKDIKKQQVGVQKGSTAADAVDQTKELKN--A 173 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + F EI CDA D + A P + IL D + Sbjct: 174 KIVYFGNNVEILNDLGNG-CDAAVMDE--VVAKYYAKKDPGKFKILNDNLITEKYVIGFR 230 Query: 232 QGDTEWYNIVSWTHYAM 248 GD + V M Sbjct: 231 TGDEKLKAEVEKQLKDM 247 >gi|24113297|ref|NP_707807.1| cystine transporter subunit [Shigella flexneri 2a str. 301] gi|24052304|gb|AAN43514.1| similar to periplasmic glutamine-binding protein; permease [Shigella flexneri 2a str. 301] gi|281601362|gb|ADA74346.1| periplasmic glutamine-binding protein; permease [Shigella flexneri 2002017] Length = 285 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+ G L G+ F+ +G GF+V+F + Sbjct: 33 VMAVALVAGMSVKSFADEGLLNKVKESGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 92 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 93 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 147 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K I + + L G + V GT E ++ + + ++ Sbjct: 148 IQALVKKGNEGTIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 203 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 204 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 261 Query: 245 H 245 Sbjct: 262 I 262 >gi|52786315|ref|YP_092144.1| YqiX [Bacillus licheniformis ATCC 14580] gi|52348817|gb|AAU41451.1| YqiX [Bacillus licheniformis ATCC 14580] Length = 179 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 65/172 (37%), Gaps = 10/172 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + T+ T++S L G + F + GFD Sbjct: 1 MKKWMLLVVTACVTFALTACGTSSSSDDK----KTLVMGTSADYPPFESKDGD-KIVGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL+ + I+ ++ AL++ ++DI+ T R+ + F Sbjct: 56 VDLAEALAEKTGHE---IEVKDMDFNGLVTALKTNKVDIVLSGMTPTPKRKK--QVDFSN 110 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + Y + K GI S+ L G ++ VQ G+ E + +++K Sbjct: 111 VYYTAHNMIVTKKSSGIKSLDDLKGKTVGVQLGSIQEEKAKELTPDYDLKVE 162 >gi|167994765|ref|ZP_02575856.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|16422914|gb|AAL23174.1| putative arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205327421|gb|EDZ14185.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|267996685|gb|ACY91570.1| putative arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160843|emb|CBW20374.1| putative arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312915452|dbj|BAJ39426.1| arginine ABC transporter substrate binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321223226|gb|EFX48296.1| putative arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323132692|gb|ADX20122.1| putative arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 246 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 88/260 (33%), Gaps = 28/260 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + + S S L G + + V A+ GFD Sbjct: 1 MKKKLIVMLLASLSVHAASVSAR-----------TLHFGTSATYAPYEFVDADNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + ++ + + +L+ K+ D + D T RE ++F Sbjct: 50 IDVANAVCKEM---QAECSFTNQSFDSLIPSLRFKKFDAVIAGMDMTPKRE--QQVSFSQ 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ +K + + L G + ++ GTT + L D P+ ++ Sbjct: 105 PYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYL 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + +R + GD + A+ ++ I+ + S A+ + + Sbjct: 161 NAFTDLKNNRLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKDND 217 Query: 236 EWYNIVSWTHYAMVTAEELG 255 ++ + + E Sbjct: 218 ALLQEINAALDKVKASPEYA 237 >gi|294501176|ref|YP_003564876.1| arginine ABC transporter arginine-binding protein ArtP [Bacillus megaterium QM B1551] gi|294351113|gb|ADE71442.1| arginine ABC transporter, arginine-binding protein ArtP [Bacillus megaterium QM B1551] Length = 269 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 76/220 (34%), Gaps = 17/220 (7%) Query: 1 MY-KDFF--VSILCLIILFFTSFSTNASIL-----GDIKKRGFLKCGINTGLVGFAEVK- 51 M K + +I L + D K + L G + F + Sbjct: 1 MKLKKWLSVTAIGLLTAGVLAACGAGEGTSNGGASSDDKDKKVLVMGTSADYPPFEYIDT 60 Query: 52 --ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 + + GFDVD +A+ + D +Q + ALQS ++D++ T Sbjct: 61 AKGDSEAIGFDVDLAKAIGKKLGYD---VQVKDMEFGGLIPALQSNKVDLVLAGMTPTEK 117 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ + F + Y + K I + +L G ++ VQ + + K + Sbjct: 118 RKK--NVDFSDVYYEAKNMIVSKKDAPIKNAEELKGKTVGVQTSSIQADEAKEIAKEVD- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + +R+ E+ +++R DA + + + Sbjct: 175 GVNVTTRDRIPELIQEMKSNRIDAAIIEDTVAKGYVNKDK 214 >gi|225862406|ref|YP_002747784.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB102] gi|229154120|ref|ZP_04282245.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus ATCC 4342] gi|225789767|gb|ACO29984.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB102] gi|228629400|gb|EEK86102.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus ATCC 4342] gi|324324462|gb|ADY19722.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 264 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + P+ I + L++K+ D++ + T R + F Sbjct: 61 FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G + V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNASISSPEDLKGKKVGVVKASTFKNLVA------KHTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|116491635|ref|YP_811179.1| amino acid ABC transporter periplasmic protein [Oenococcus oeni PSU-1] gi|290891244|ref|ZP_06554306.1| hypothetical protein AWRIB429_1696 [Oenococcus oeni AWRIB429] gi|116092360|gb|ABJ57514.1| amino acid ABC transporter substrate-binding protein, PAAT family [Oenococcus oeni PSU-1] gi|290479208|gb|EFD87870.1| hypothetical protein AWRIB429_1696 [Oenococcus oeni AWRIB429] Length = 282 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 78/228 (34%), Gaps = 7/228 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + ++ IKK +K G++ + +G GFDVD A + K+++ Sbjct: 36 TKSSDHWYRIKKSKEIKIGLDDTFIPMGFRNKSGKLIGFDVDLANATFKKLG---IKVEW 92 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P+N + L QID + + R+ +AF Q + K I+S Sbjct: 93 EPINWSTKEQLLNDGQIDAIWNGYTISAARKK--KVAFSIPYKKGTQVLVTLSKDKINSF 150 Query: 141 SQLSGASICVQAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + + G ++ +Q G+T + Y +K P ++ ++ +A R D Sbjct: 151 ADMKGKTLGLQNGSTAQTQFQQYKNLLKKYVKGTPQKYDTFDKAFMDLKAGRIQGILVDS 210 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 ++ I+ + D + V+ Sbjct: 211 MYAGYYVKHLSDSQDYKIIYGGYPTDENGVGFRKSDLKLREEVNTVLK 258 >gi|238792194|ref|ZP_04635829.1| Extracellular solute-binding protein family 3 [Yersinia intermedia ATCC 29909] gi|238728431|gb|EEQ19950.1| Extracellular solute-binding protein family 3 [Yersinia intermedia ATCC 29909] Length = 270 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 37/253 (14%), Positives = 86/253 (33%), Gaps = 22/253 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ ++ S A + I G++ G F + +G+ GFD Sbjct: 14 MKK----TLAAILTGLILSAPVAAQGIDTI------SFGVDGGYPPFDVLSPSGEITGFD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + +K ++ + AL +++ D + + T R+ + F Sbjct: 64 IDIANALCENL---HAKCVFVKQPFESMIAALNARKFDAIIASLTITEERKK--EVDFTD 118 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K + + L G ++ VQ G+ E ++ + + Sbjct: 119 RYYRSAAQLVARKGSPLLPDTASLKGKTVGVQTGSIHETYAKKHWG--GQGVKIVSYANQ 176 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDT 235 + + + R +A D + + R + +I + A+ + + Sbjct: 177 DNVYLDLMSGRINASLQDNIQAASSFIDTPRGQKFAFAGPVIQDETISSDVGIAVGKDNP 236 Query: 236 EWYNIVSWTHYAM 248 + ++ A+ Sbjct: 237 ALRDALNGAIKAI 249 >gi|254712434|ref|ZP_05174245.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella ceti M644/93/1] gi|254715507|ref|ZP_05177318.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella ceti M13/05/1] Length = 257 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 84/248 (33%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L ++L + + + K+ ++ F + +G GFD Sbjct: 1 MLKSLVLAGLASVVLTVSVQAPVQA-----KEWKEIRIASEGAYPPFNYMSPDGKLVGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL A+ +K + + L+S + D + + T R+ + F Sbjct: 56 LDIANALCEAM---EAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 110 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + K I+S G ++ Q TT D + ++ Sbjct: 111 KYYSTPLSVAVPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 168 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E +A ++ R DA D + + +I +++ A A+ GD + Sbjct: 169 ADEANADLKSGRLDAVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTAVALRLGDDDLR 228 Query: 239 NIVSWTHY 246 + Sbjct: 229 EQFNAAIK 236 >gi|332101261|gb|EGJ04607.1| cystine-binding periplasmic protein [Shigella sp. D9] Length = 285 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 85/241 (35%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L+ + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 33 VMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 92 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 93 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 147 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K + + + L G + V GT E ++ + + ++ Sbjct: 148 IQALVKKGNEGTLKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 203 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 204 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNGA 261 Query: 245 H 245 Sbjct: 262 I 262 >gi|307137436|ref|ZP_07496792.1| glutamine ABC transporter periplasmic protein [Escherichia coli H736] gi|331641327|ref|ZP_08342462.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli H736] gi|331038125|gb|EGI10345.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli H736] Length = 248 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 83/245 (33%), Gaps = 20/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 53 LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T E + D + A +G E + V Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-EFKAVGDSLEAQQYGIAFPKGSDELRDKV 222 Query: 242 SWTHY 246 + Sbjct: 223 NGALK 227 >gi|302558020|ref|ZP_07310362.1| glutamate-binding protein [Streptomyces griseoflavus Tu4000] gi|302475638|gb|EFL38731.1| glutamate-binding protein [Streptomyces griseoflavus Tu4000] Length = 281 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 78/226 (34%), Gaps = 11/226 (4%) Query: 43 GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 G K +G + GFDVD ++ + + +I+++ + +R AL + ++ Sbjct: 49 DQPGLGLKKPDGSFSGFDVDVATYVAKELGYEADQIEWVETKSADRENALARGDVKFIAA 108 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 T R+ + F Q ++ K I+ + L+ +C G+T+ + Sbjct: 109 TYSITDERKE--KVDFAGPYLLAHQDLLVKKDSDITEATDLNDKKLCSVTGSTSAQNVKK 166 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 F K E AA ++ DA T D S L + + +S Sbjct: 167 DFA---PKAQLKQVGTYSECVAALQSGAVDALTTDDSILAGFAAQEQYAGKFKLAGLKLS 223 Query: 223 KSPLAPAIIQGDTEWYNIVSWTH------YAMVTAEELGITQKNIN 262 + +GDTE + ++ A A E N Sbjct: 224 NENYGIGVKKGDTETTDKINAALEKMVGDKAWDKAVEANFGPAEYN 269 >gi|229095071|ref|ZP_04226067.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus Rock3-29] gi|229101173|ref|ZP_04231939.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus Rock3-28] gi|228682301|gb|EEL36412.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus Rock3-28] gi|228688401|gb|EEL42283.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus Rock3-29] Length = 264 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLAG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + P+ I + LQSK+ D + + T R ++F Sbjct: 61 FDVEIGEALAKKMGMKPAPIT---NPWETLIQGLQSKKYDAILGSMAITEER--LKAVSF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + ++ ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKTLVS------KHTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VKKVNKALDEII 239 >gi|242280779|ref|YP_002992908.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] gi|242123673|gb|ACS81369.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] Length = 261 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 75/250 (30%), Gaps = 16/250 (6%) Query: 1 MYK---DFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + + LI + F + L +K+ G + ++ G F + Sbjct: 1 MRRFTALYLAVFTLLITVSFVGCAKQEKTGLAKVKEAGEVSFAMSGGYPPFNYFNKQNEL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD + ++ + + L+S + + T R+ + Sbjct: 61 VGFDVDVAKEVAKRLGVKLKPVT---TEWSGIIEGLRSGIYSGILGSMAATEQRKKV--V 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y+ G + S +L ++ + GTT E + ++ Sbjct: 116 DFSTPYYYSGAQMFVRTDSPFKSADELKSKAVGLVTGTTFEQD-----AKNLGVSDIRLY 170 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + D D + + N + L + K +A A + D Sbjct: 171 KDDTHTLTELSSGVIDGVITDR--VVGVNAMNSGKFKIKPLGSPLRKEDIAVAFRKEDKT 228 Query: 237 WYNIVSWTHY 246 + V+ Sbjct: 229 LTDEVNKILK 238 >gi|54309895|ref|YP_130915.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium profundum SS9] gi|46914334|emb|CAG21113.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Photobacterium profundum SS9] Length = 272 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 83/252 (32%), Gaps = 25/252 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + L TS ++ GI F+ + +G+ KGFD Sbjct: 15 MKKWILAAAM-VSALGATSLQAKEYT--------EIRFGIEGAYPPFSWTEPSGELKGFD 65 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + + + +L +++ D + T R+ + F Sbjct: 66 VDMANALCEEL---QTKCKIVAQDWDGIIPSLLARKYDAIIAAMSITEERKK--KIDFTG 120 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ K I S L G I VQ TT + L D F + + Sbjct: 121 KYALIPNKYVAKKGTEIDFSTEGLKGVKIGVQRATTHDKYLTDNF---GDSVTIVRYGSF 177 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233 ++ +A R GD SAL + + + + P A+ + Sbjct: 178 DDAYLDLKAGRIATVLGDASALEEGLINKEGGEGYEFIG-PSLTDPKWFGDGFGIALRKQ 236 Query: 234 DTEWYNIVSWTH 245 D E + Sbjct: 237 DKELTKKLDAAI 248 >gi|325496747|gb|EGC94606.1| glutamine ABC transporter periplasmic protein [Escherichia fergusonii ECD227] Length = 248 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 83/245 (33%), Gaps = 20/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSVFKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 53 LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + D + A +G E + V Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNGR-FKAVGDSLEAQQYGIAFPKGSDELRDKV 222 Query: 242 SWTHY 246 + Sbjct: 223 NGALK 227 >gi|225420155|ref|ZP_03762458.1| hypothetical protein CLOSTASPAR_06498 [Clostridium asparagiforme DSM 15981] gi|225041212|gb|EEG51458.1| hypothetical protein CLOSTASPAR_06498 [Clostridium asparagiforme DSM 15981] Length = 299 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 84/286 (29%), Gaps = 44/286 (15%) Query: 1 MYKDFFVSILCLIILFFTSF-----------------------------------STNAS 25 M K F + ++ F + + + Sbjct: 1 MKKKTFCLAMAAVMAFGLAGCGGAETKGEAATTVESTADTTAADTTAADKAADTSAAESE 60 Query: 26 ILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 + + G G + + NG++ GFD++ + ++ + + P+ Sbjct: 61 TSAEAQAAGGHFIVGFDQEFPPMGFMGDNGEYTGFDLELAQEVAKRLGLEYQP---QPVI 117 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + + L S ID + T + + Q F++ GI+S+ L Sbjct: 118 WDTKDMELDSGNIDCIWNGFTMTG---RESDYEWTEAYMANSQVFVVAADSGIASMDDLK 174 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G + QA ++ L + + DA D + A Sbjct: 175 GKVVECQADSSALAALNENPDLTATFKELVTTADYNSAFMDLEQGAVDAIAMD--VIVAG 232 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 R ++ VIL D +S +G+TE + V T M Sbjct: 233 YQIQQRNADFVILEDHLSAEEYGVGFKKGNTELRDKVQKTLEEMAQ 278 >gi|194288893|ref|YP_002004800.1| cysteine ABC transporter periplasmic protein [Cupriavidus taiwanensis LMG 19424] gi|193222728|emb|CAQ68731.1| cysteine ABC transporter, periplasmic binding component [Cupriavidus taiwanensis LMG 19424] Length = 273 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 77/246 (31%), Gaps = 13/246 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +K + L + + A +L +K+ G LK G+ F A + +GFDV Sbjct: 9 FKSLLAASLVAGAGLAATAAHAADLLDTVKQAGVLKIGLEGTYPPFGFRGAKNELEGFDV 68 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D RA++ + P ++ LQ+ + D++ + T R L F Sbjct: 69 DVARAVAGKLGVKPE---FVTTEWSGIIAGLQAGKFDVIVNQVNVTPQR--QQVLDFSTP 123 Query: 122 TYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I K S+ L G + V G+ + Sbjct: 124 YVYSDAQLIQRKDDKRQFKSLEDLKGHKLGVSLGSNYNDLAKSVA-----GIDVKTYPGA 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A R DA D + A + + + +A + + ++ Sbjct: 179 PEYLRDLAAQRVDAALNDR-LMVAYLVKTTNLPLRPGAIVAGATTQVAIPFRKDNPKFAQ 237 Query: 240 IVSWTH 245 ++ Sbjct: 238 AINHAL 243 >gi|209546622|ref|YP_002278540.1| family 3 extracellular solute-binding protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537866|gb|ACI57800.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 278 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 86/251 (34%), Gaps = 13/251 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCR 65 +S+ + + A L I L+C + FA + GFDVD C Sbjct: 6 LSLTVAFVGMAAAVPAKADQLDTIMSAKTLRCATFADVPPFASPDPKTREMAGFDVDLCG 65 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++ + P++ + R ++ ++DI N +TL R + F Y Sbjct: 66 AIAKELGVKAE---IKPVSVEARVPEVKLGRVDITVANLAYTLSRAEQIQ--FSDPYYLA 120 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + I+ + +G + G+T+E+++ K P+ F+ A Sbjct: 121 KEMLIVPADDAGKQKADYAGQRLASTKGSTSEMSI------KLNKSDPLTFQDTASAYLA 174 Query: 186 YRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + + + + + E ++ + + P+ + + ++ Sbjct: 175 VQQGKARGMVANTMTTTKFVNESKSKGKEMRMIEEPMLYQPIGIGMAKDQPALTAKINEI 234 Query: 245 HYAMVTAEELG 255 + + + E+ Sbjct: 235 LHKLDASGEIN 245 >gi|317402646|gb|EFV83204.1| solute-binding protein [Achromobacter xylosoxidans C54] Length = 275 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 46/277 (16%), Positives = 98/277 (35%), Gaps = 13/277 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M + + + + +A L DIK RG CG F+ G+ Sbjct: 1 MKHWIITCAAAIGLAATLAPAAHADTLQDIKARGKFICGTMGTAEPFSFQDPKTRAIVGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VD C+A++ ++ ++ + + R L + ++D+++ N W+ R + + Sbjct: 61 EVDMCQAVADSLG---VPLELKLIAVEARIPELIAGRVDVVAANLGWSPERAQQIDYSH- 116 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + K + + + L+G + G+++E + P+ F+ Sbjct: 117 QHFVSLQKVLARESDKDLKAPADLAGKRVSAVRGSSSEQGARKFIP----NVEPVTFKDP 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 A + + + G L LK IL + P + +GDT Sbjct: 173 SGAFLALQQGKVSGFVGSELMLVKLKQQAASSAVPAKILEPALFVEPWGMGVRRGDTAML 232 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 N V+ + E G + ++ T +++R Sbjct: 233 NQVNKVLDGL---EASGKATQIFDKWFGAGTPFNMKR 266 >gi|325293281|ref|YP_004279145.1| arginine-binding periplasmic protein [Agrobacterium sp. H13-3] gi|325061134|gb|ADY64825.1| arginine-binding periplasmic protein [Agrobacterium sp. H13-3] Length = 257 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 79/246 (32%), Gaps = 17/246 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++ + + + S + A + G F ++A+G GFD+D + Sbjct: 7 LLAAVSIAAISLFSGAALAQ--------DKIVIGTEGAYPPFNNLEADGTLTGFDIDIAK 58 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL + ++ ++ + ALQ+K+ D + + T R + F Y Sbjct: 59 ALCVEM---KAECTFVTNDWDGIIPALQAKKFDAIIASMSITPER--LQKVDFSKKYYNT 113 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + K I SV L G S+ Q TT +F ++ +E Sbjct: 114 PPAIAVPKDSPIKSVDDLKGKSLGAQGSTTHSNYAEKHFP----GSDLKMYPTADEYKLD 169 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R DA DI L ++ ++ P + + ++ Sbjct: 170 ISNGRIDAVIDDIVVLSEWLKSDAGKCCKILTPLPVDVEINGNGAGVAVRKGDTALADKF 229 Query: 246 YAMVTA 251 A + Sbjct: 230 TAAIAG 235 >gi|62179452|ref|YP_215869.1| arginine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127085|gb|AAX64788.1| ABC superfamily (bind_prot), arginine transport system [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322713921|gb|EFZ05492.1| arginine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 266 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 85/247 (34%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 24 MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 70 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + F Sbjct: 71 VDLANALCKEI---DASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 125 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 126 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMD----KHQEITTVPYDSYQ 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 181 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 240 Query: 239 NIVSWTH 245 + Sbjct: 241 QKFNTAL 247 >gi|315613421|ref|ZP_07888329.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] gi|315314417|gb|EFU62461.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] Length = 270 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K V L + + + + S + IK++G L + F V Sbjct: 4 KKWILVVCSMLASVVLVACQSGTDSSQSAVDAIKQKGKLVVATSPDYAPFEFQALVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAIAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K +S L+ A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKMSFLVRKADLDKYKDLSSLASANIAAQKGTVPETMVKEQLP----NAQ 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + A AI + Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAGKNSDLVVASVNLTMKDGEANAVAIKK 234 Query: 233 GDTEWYNIVSWTHY 246 ++ +V Sbjct: 235 EQSDLKAVVDKVIQ 248 >gi|260554424|ref|ZP_05826645.1| lysine-arginine-ornithine-histidine-binding periplasmic protein [Acinetobacter baumannii ATCC 19606] gi|260410966|gb|EEX04263.1| lysine-arginine-ornithine-histidine-binding periplasmic protein [Acinetobacter baumannii ATCC 19606] Length = 261 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 82/256 (32%), Gaps = 22/256 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L L + + K ++ G + F +G GFD Sbjct: 5 MKKIFVSTTLVLAAVATNVQA---------KDWKVIRFGTESSYAPFEYKTPDGKLTGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + + +K ++ + AL++K+ D + + T R + F Sbjct: 56 VDLGNAICAKL---KAKCVWVENSFDGMIPALKAKKFDGILSSMTVTDERAK--QILFSS 110 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K + + + L G + VQ GT E Y+ + + + Sbjct: 111 KIYNTPTRMVAKKGSPLLPTPTSLKGKRVGVQQGTIQETYAKTYWAPKGVS--VVPYPTQ 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + R DA D + L + + A + + D Sbjct: 169 DLIYQDMMSGRLDATLQDAIMVDGAFLKQPKGKNFAFAGGNVVDVKTLGVGAAIGLRKED 228 Query: 235 TEWYNIVSWTHYAMVT 250 + + A++ Sbjct: 229 ADLKANIDKALAAIIA 244 >gi|222152802|ref|YP_002561979.1| extracellular amino acid-binding protein [Streptococcus uberis 0140J] gi|222113615|emb|CAR41486.1| putative extracellular amino acid-binding protein [Streptococcus uberis 0140J] Length = 268 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 80/251 (31%), Gaps = 16/251 (6%) Query: 2 YKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 K +I + ++ T+ ST + I +G L ++ F Sbjct: 4 KKILKAAIGLMTLVSMTACSTENSKDTQDKIVDKGTLVVAVSPDYAPFEFQTLKDGKNTI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D+ + ++ + K++ P++ +LQS + DI +T R Sbjct: 64 VGADITLAQDIAKEL---KVKLKLSPMSFNNVLSSLQSGKADIAISGISYTKERSKV--Y 118 Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y ++ K ++S++ L+G + Q + E K H + Sbjct: 119 DFSKSYYDTENAIVVKKDKLTSLTSMASLAGKKVGAQKSSIQENLAKTQLK----DSHIV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E+ + + DA T D N + + A+ +G Sbjct: 175 SLTDMGEVVNELKNGQLDAITMDGPVATGYVAQNKDLAIVDYTFKTNNADAKVVAMPKGS 234 Query: 235 TEWYNIVSWTH 245 + ++ Sbjct: 235 PKLQKTINKVV 245 >gi|319778834|ref|YP_004129747.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Taylorella equigenitalis MCE9] gi|317108858|gb|ADU91604.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Taylorella equigenitalis MCE9] Length = 260 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 79/245 (32%), Gaps = 17/245 (6%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 +L ++ + A K L+ G TG V F G+ GFD++ Sbjct: 1 MRSLLLTAGLVLGLASVVQA------KDFTELRIGTETGYVPFEYKNEKGELIGFDIEVG 54 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 A+ + +K ++ LQ+++ DI+ + RE + F Y Sbjct: 55 NAICEKL---KAKCTWVEQPFDALIPGLQARKFDIIHASITHNEAREKV--IDFTDDVYA 109 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 I K GI++ L G + G+ E + ++ + Sbjct: 110 IPTQLIAKKGSGIATEDDLKGKRLGALQGSAQEAYARRVISKK--DVKVVSYKEQPQTFI 167 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS----PLAPAIIQGDTEWYNI 240 +A R DA + + + +++ + + ++ I +GD + Sbjct: 168 DLKAGRIDAAIVEKPNANSAFIATPEGADYEFVGQPLEHELLNNRISIGIRKGDKDLKEA 227 Query: 241 VSWTH 245 + Sbjct: 228 LDKAI 232 >gi|262278399|ref|ZP_06056184.1| histidine-binding periplasmic protein [Acinetobacter calcoaceticus RUH2202] gi|262258750|gb|EEY77483.1| histidine-binding periplasmic protein [Acinetobacter calcoaceticus RUH2202] Length = 258 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 83/256 (32%), Gaps = 22/256 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L L + + K ++ G + F +G GFD Sbjct: 5 MKKMFVSTTLVLAAVATNVQA---------KDWKVIRFGTESSYAPFEYKTPDGKLTGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + + +K ++ + AL++K+ D + + T R + F Sbjct: 56 VDLGNAICAKL---KAKCVWVENSFDGMIPALKAKKFDGILSSMTVTDERAK--QILFSS 110 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K + + + L G + VQ GT E Y+ + + Sbjct: 111 KIYNTPTRMVAKKGSPLLPTAASLKGKRVGVQQGTIQETYAKTYWAPKG--VTVVPYPVQ 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + R DA D + L + + + + A + + D Sbjct: 169 DLIYQDMMSGRLDATLQDAIMVDGAFLKQPKGKNFAFVGGNVVDAKTLGVGAAIGLRKED 228 Query: 235 TEWYNIVSWTHYAMVT 250 + + A++ Sbjct: 229 ADLKANIDKALTAIIA 244 >gi|229028211|ref|ZP_04184351.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus AH1271] gi|228733085|gb|EEL83927.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus AH1271] Length = 264 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 80/252 (31%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESATTSSNGEKEFRYAMSGLYKPFNYKENDGKLAG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + P+ I + LQSK+ D + + T R + F Sbjct: 61 FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLQSKKYDAILGSMAITEER--LKAVNF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKALVA------KHTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|76798879|ref|ZP_00781087.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 18RS21] gi|77406477|ref|ZP_00783532.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae H36B] gi|77409393|ref|ZP_00786092.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae COH1] gi|76585775|gb|EAO62325.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 18RS21] gi|77172002|gb|EAO75172.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae COH1] gi|77174912|gb|EAO77726.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae H36B] Length = 301 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 34/254 (13%), Positives = 76/254 (29%), Gaps = 14/254 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDI------KKRGFLKCGINTGLVGFAEVKANGD 55 I L ++ ++ + + I +K + G + V +GD Sbjct: 29 KNILLTIIFGLFMIILSACGMSNKEMAGIDNWEHYQKEKKITIGFDNTFVPMGFESRSGD 88 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D A+ +++ P+N + L + ID++ T R Sbjct: 89 YTGFDIDLANAVFKEYG---ISVKWQPINWDMKETELNNGNIDLIWNGYSKTAERAK--K 143 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 +AF + Q + I+S+ + G + Q+G++ D K Sbjct: 144 VAFTNPYMNNHQVIVTKTSSHINSIKDMKGKKLGAQSGSSGFDAFNAKPDILKKFVKGKE 203 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + ++ + + +R D D + + + Sbjct: 204 AVQYDTFTQALIDLKNNRIDGLLIDEVYANYYLKQEGNIKAYYFVKTAYQGENFVVGARK 263 Query: 233 GDTEWYNIVSWTHY 246 D ++ Sbjct: 264 VDRRLIEKINKAFK 277 >gi|300934588|ref|ZP_07149844.1| putative extracellular solute-binding protein [Corynebacterium resistens DSM 45100] Length = 408 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 82/206 (39%), Gaps = 11/206 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + +I KRG L GI L G+ GF++D R ++ IF+DP K+++ + + Sbjct: 122 VAEIHKRGRLIVGIAQSLNRLGYRDPVTGELVGFEIDLAREIARDIFNDPEKVEFRYVES 181 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + R AL+ ++DI+SR T R F ++ + I V L G Sbjct: 182 RNREKALREGEVDIISRTMSITSAR--QQKTEFSSPYLTVRPRLLVPENSHIQHVGDLKG 239 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++C +T+ L + + + A + H+ DA D + L L+ Sbjct: 240 KTVCATNDSTSASALR-----NYDLSKVLATRTWTDCLMALQRHQADAVYTDDAILSGLQ 294 Query: 206 LTNDRPSEHVILPDIISKSPLAPAII 231 + ++ D +++ I Sbjct: 295 AQDPH---MKLVGDDFAENHYGVGIP 317 >gi|170679839|ref|YP_001743323.1| cystine transporter subunit [Escherichia coli SMS-3-5] gi|170517557|gb|ACB15735.1| cystine-binding periplasmic protein [Escherichia coli SMS-3-5] Length = 266 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 13/241 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + L + +L +K+RG L G+ F+ +G GF+V+F + Sbjct: 14 VMAVALGAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQ 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + + P +L SK+ID++ + R+ F G Sbjct: 74 LAKHLGVEA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK--KYDFSTPYTISG 128 Query: 127 QGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ K + + + L G + V GT E ++ + + ++ Sbjct: 129 IQALVKKGNEGTLKTAADLKGKKVGVGLGTNYE----EWLRQNVQGVDVRTYDDDPTKYQ 184 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R R DA D L AL L + + S+ A+ +G+ + V+ Sbjct: 185 DLRVGRIDAILVDR--LAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDA 242 Query: 245 H 245 Sbjct: 243 I 243 >gi|212709681|ref|ZP_03317809.1| hypothetical protein PROVALCAL_00729 [Providencia alcalifaciens DSM 30120] gi|212687492|gb|EEB47020.1| hypothetical protein PROVALCAL_00729 [Providencia alcalifaciens DSM 30120] Length = 247 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 85/249 (34%), Gaps = 25/249 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + L T+ ++ ++ F N GFD Sbjct: 1 MKKLLLATLLGAVTLSATAA-----------EKETIRFATEATYAPFEMFDKNNQIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + + + + + +L+ ++ + L D T R + F Sbjct: 50 VDLANAMCAKM---NATCTFTHQSFDSLIPSLKFRRFEALMAGIDITPER--QQQVDFTE 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K I++V QL G I VQ GTT + + + K + ++ + Sbjct: 105 TYYPNSAEFIAVK-DKITAVDQLKGKKIGVQNGTTHQKYIMEQHK----DMTVVPYDNYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R +A GD + + + + L A+ +G+ E Sbjct: 160 SAILDLQNGRINAVFGDTAVADEWLKAKGNENLAPVGDKVTDPQYFGIGLGIAVRKGNKE 219 Query: 237 WYNIVSWTH 245 + ++ Sbjct: 220 LLDKMNKAL 228 >gi|163858459|ref|YP_001632757.1| solute-binding protein [Bordetella petrii DSM 12804] gi|163262187|emb|CAP44489.1| probable solute-binding protein [Bordetella petrii] Length = 284 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 97/256 (37%), Gaps = 12/256 (4%) Query: 2 YKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 Y+ +L I+L +A+ IK RG + CG + ++ G+ Sbjct: 3 YRSIKTVVLGTILLSAVWGSQASANQWDTIKARGTIVCGTQNASSPYGFQDPVKREYVGY 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C+A++ + K+Q+ P++ + R ++ ++D+++ W R + F Sbjct: 63 DVDMCKAIAKELG---LKLQHKPVSTEARIPEVKMGRVDMMAGAVAWLPKRAE--QVDFS 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ GI +++ L G +C +G+++ + + F+ + Sbjct: 118 DQYLQGYIKVLVKADSGIKTLADLKGKKVCASSGSSSAAIAEKVL----QGANVLTFQNI 173 Query: 180 EEIDAAYRAHRCDAYTGDI-SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + ++ + +A T L + +L + + + QG+ Sbjct: 174 AQCYVGLQSGKVEAMTAGELVLRRFLNDSVKEGKPTALLDEPTYTEHIGIIVKQGEAALL 233 Query: 239 NIVSWTHYAMVTAEEL 254 ++ A+ + EL Sbjct: 234 AQINQAIAALDKSGEL 249 >gi|158426031|ref|YP_001527323.1| putative ABC transporter periplasmic solute-binding protein [Azorhizobium caulinodans ORS 571] gi|158332920|dbj|BAF90405.1| putative ABC transporter periplasmic solute-binding protein [Azorhizobium caulinodans ORS 571] Length = 271 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 81/235 (34%), Gaps = 10/235 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + +A + DI + L G+ L F + A G +G+D D + + + + ++ Sbjct: 30 AASAQSIDDILSKKKLTIGMLVDLPPFGLLDAQGKPEGYDADVAKLMGKYLGVE---VEI 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +P+ R L + ++D L T R + F + KK + ++ Sbjct: 87 VPVTGPNRIPYLLTNKVDALVATFGITPERAKQVQ--FSIPYSAIEIQLLGPKKLDVKTL 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 Q G I V +T + L + F+ A+ + + D + Sbjct: 145 DQTVGKKIAVARASTQDTALTAAVPK---GATIMRFDDDATAAQAFISGQTDLLGSNNVI 201 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 +L P + ++ + +G T++ ++ Y + EL Sbjct: 202 --GAQLAEANPDMGIERKIVLRSQYNGITVRRGSTDFLQWINTFLYFVKNNGELD 254 >gi|107026866|ref|YP_624377.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia cenocepacia AU 1054] gi|116691939|ref|YP_837472.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia cenocepacia HI2424] gi|170736067|ref|YP_001777327.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia cenocepacia MC0-3] gi|105896240|gb|ABF79404.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116649939|gb|ABK10579.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] gi|169818255|gb|ACA92837.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia cenocepacia MC0-3] Length = 260 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 92/254 (36%), Gaps = 19/254 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ + + +L ++ A K ++ G + F +G GFD Sbjct: 1 MKR--LIAAVSIALLAVSAGPAVA------KDWTTIRFGTDASYAPFESKAPDGKLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + +K +L + AL++K+ D + + T R +G Sbjct: 53 IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITPQRAQQIGFT-TK 108 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I + + + + + L G SI V+ GTT E Y+ + + ++ + Sbjct: 109 IYNQPTRLVVKKGSSLLPTAASLKGKSIGVEQGTTQETYAKAYWGKQG--ANVVSYQNQD 166 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + A A R DA D L + R + + + + + + Q DT Sbjct: 167 GVYADLIAGRLDAALQDEVQAAIGFLKSPRGANYTFVGPELVDEKVLGIGAGIGLRQEDT 226 Query: 236 EWYNIVSWTHYAMV 249 + + + MV Sbjct: 227 DLKAKIDRAIHDMV 240 >gi|228954440|ref|ZP_04116465.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228805097|gb|EEM51691.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 259 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 89/254 (35%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N K L G + + V+A+ + G Sbjct: 1 MKKLVSISFALILIVSIFSACSNGEEKATGKSEKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVNF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + I K I SV L G + VQ G+ E A++ + + +R Sbjct: 116 TDIYFVAKNMVISKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|163857186|ref|YP_001631484.1| putative amino-acid ABC transporter, periplasmic amino acid-binding protein [Bordetella petrii DSM 12804] gi|163260914|emb|CAP43216.1| putative amino-acid ABC transporter, periplasmic amino acid-binding protein [Bordetella petrii] Length = 260 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 75/254 (29%), Gaps = 14/254 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + L+ L + + L IK G K G F A+G GFD Sbjct: 1 MKPLRSILLAGLLQLAVAAGAHAQDGLAAIKSAGVFKIGTEGTYAPFTYHDASGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A++ + ++ L K+ D + T R+ F Sbjct: 61 VEIGEAIAQRLGVKAE---FVEGKWDGLIAGLDVKRYDAVINQVGITDARKA--KYDFSD 115 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ I S + L G T+ LA + A + + Sbjct: 116 PYIASQAVLIVRDDNTDIKSFADLKGKRSA-NTLTSNFGKLAQKYGA-----QVVAVQGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAIIQGDTEWY 238 E + R DA D + K ++ S I QG+ + Sbjct: 170 NESIDLLTSGRVDATINDNLSFLDFKKHKPNAKVKIVDSDKSAEFSESGVLIRQGNPQLR 229 Query: 239 NIVSWTHYAMVTAE 252 ++ A + A+ Sbjct: 230 EAINKAL-ADIKAD 242 >gi|149019349|ref|ZP_01834711.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP23-BS72] gi|147931219|gb|EDK82198.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae SP23-BS72] Length = 309 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 80/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L F + + + S + IK++G L + F V Sbjct: 4 KKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E + + DA D + N + + + A A+ + Sbjct: 175 LTSLTNMGEAVNELQVGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234 Query: 233 GDTEWYNIVSWTHY 246 + +V Sbjct: 235 NSDDLKEVVDKVIQ 248 >gi|238897253|ref|YP_002922930.1| polar amino acid ABC transporter periplasmic amino acid-binding subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465008|gb|ACQ66782.1| polar amino acid ABC transporter periplasmic amino acid-binding subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 277 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 58/305 (19%), Positives = 99/305 (32%), Gaps = 65/305 (21%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L DIKK G ++ + F G+DVD A+ A + I+++ Sbjct: 23 ADKLNDIKKAGKIRVAVFDNNPPFGYYDPKTKKLIGYDVDIAHAIGKAFGVN---IEFVE 79 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 N R L+SK++D+++ N T R + F + GQ FI K + Sbjct: 80 TNPANRIPLLKSKKVDLIAANFTITPERAK--EVDFSLPYFSTGQKFIAKKG-VLKKPDD 136 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L I GT E+TL + + + I ++ + A R A T D + L Sbjct: 137 LKSLRIGADKGTVQEITLRENYPSA----IVISYDDTPQAFMALRNENVQAITQDDAKLV 192 Query: 203 ALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L + I I+K A +G+ N ++ Sbjct: 193 GLMGNLKAEMKASFEISHFSITKEYQGIATAKGEKNLINAINTI---------------- 236 Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 L ++K ++ +++R G ++ Sbjct: 237 ---------------LLKMEKEGE--------------AVK-------IYNRWFGPDTKT 260 Query: 321 KIPRG 325 PRG Sbjct: 261 AQPRG 265 >gi|322834312|ref|YP_004214339.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] gi|321169513|gb|ADW75212.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] Length = 272 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 75/250 (30%), Gaps = 12/250 (4%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 FV + L F++ S + L + + G L+ I F + N GFDVD + Sbjct: 5 FVVVTLLAATLFSAASFAGATLDRVTQTGVLRNAIVNDYPPFGFIDDNNQLAGFDVDVAK 64 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++ + I + D + R L P Sbjct: 65 AVAQRMGVKLEIIAPGWETIVGGK---WQGRWDTCICSMTPNTERAKVLDFP-TPYYNSP 120 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE-------R 178 + K I S + LS I V G+T E L K F+ Sbjct: 121 AVLVVNKKDDRIKSAADLSNKKIGVGIGSTYETYLQKTLVIPGSKPITFPFDNVHVIPSD 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E G +S L R I+ ++ P A +GD EW Sbjct: 181 EEVAFQNLALGPGVRLDGVVSDLATANARIKRAPVFKIVTELY-AEPNWVATDKGDAEWD 239 Query: 239 NIVSWTHYAM 248 V+ T ++ Sbjct: 240 KKVADTIKSL 249 >gi|261340318|ref|ZP_05968176.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Enterobacter cancerogenus ATCC 35316] gi|288317409|gb|EFC56347.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Enterobacter cancerogenus ATCC 35316] Length = 266 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 84/254 (33%), Gaps = 20/254 (7%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M V + L+ ++L +K+RG L G+ F+ + Sbjct: 1 MKLALLGRQALMGVMAVALVAGMSVKTFAAENLLNKVKERGTLLVGLEGTYPPFSFQGDD 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+V+F L+ + P +L SK+ID++ + R+ Sbjct: 61 GKLTGFEVEFAEELAKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I S + L G + V GT E ++ + + Sbjct: 117 -KYDFSTPYTVSGIQALVKKGNEGTIKSAADLKGKKVGVGLGTNYE----EWLRQNVQGV 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + + D S+ A+ Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTNNTLAVAGDAFSRQESGVAVR 229 Query: 232 QGDTEWYNIVSWTH 245 +G+ + + Sbjct: 230 KGNDDLLKAIDGAI 243 >gi|123442312|ref|YP_001006291.1| amino acid-binding periplasmic protein precursor [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089273|emb|CAL12120.1| amino acid-binding periplasmic protein precursor [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 257 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 87/253 (34%), Gaps = 22/253 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F L+ S A + I G++ G F + +G+ GFD Sbjct: 1 MKKTF----AALLTGLILSAPVAAQTIETI------SFGVDGGYPPFDVLAPSGEITGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + +K ++ + AL +++ D + + T R+ + F Sbjct: 51 IDIANALCDNL---HAKCVFVKQPFESMIAALNARKFDAIIASLSITDERKK--EVDFTD 105 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K + V+ L+G ++ VQ G+ E ++ + + Sbjct: 106 RYYRSAAQLVARKGSPLSPDVASLTGKTVGVQTGSIHETYAKKHWG--GQGVKIVSYANQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDT 235 + + + R +A D + + R + +I + A+ + + Sbjct: 164 DNVYLDLMSGRINASLQDNIQAASSFIDTPRGQKFAFAGPVIQDDTISSDVGIAVGKDNP 223 Query: 236 EWYNIVSWTHYAM 248 + ++ A+ Sbjct: 224 ALRDALNGAIKAI 236 >gi|187732473|ref|YP_001881001.1| glutamine ABC transporter periplasmic protein [Shigella boydii CDC 3083-94] gi|187429465|gb|ACD08739.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Shigella boydii CDC 3083-94] Length = 248 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 85/247 (34%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M VS+ L ++F S L +T V F + + + GFD Sbjct: 1 MKSVLKVSLAALTLVFAVSSHAAD---------KKLVVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 51 VDLWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSD 105 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ + SV L G + V++GT + DY KA+ F + Sbjct: 106 GYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + +R DA D + T + + D + A +G E + Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKGCDELRD 220 Query: 240 IVSWTHY 246 V+ Sbjct: 221 KVNGALK 227 >gi|315650535|ref|ZP_07903601.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium saburreum DSM 3986] gi|315487190|gb|EFU77506.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium saburreum DSM 3986] Length = 275 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 85/269 (31%), Gaps = 38/269 (14%) Query: 1 MYKDFF-VSILCLIILFFTSFSTNASI---------------------LGDIK--KRGFL 36 M K ++++ L+ + + IK + G L Sbjct: 1 MKKKILTIALVGLMAASLAACGKASETQTSNAASESASDGKAESKSDGTAKIKTVEAGKL 60 Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 N + + G D+D A++ + ++Q + L + S + Sbjct: 61 TLATNAEFPPYEYHDGD-KIVGIDMDIADAIAKKLG---LEVQIEDIAFDSVILEVTSGK 116 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 DI T R+ + F Q I+ I L G ++ VQ GTT Sbjct: 117 ADIGLAGISATDERK--QSVDFSDTYTTSKQLIIVKDDSPIKGSKDLEGKTVGVQTGTTG 174 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 ++ +D P +++ + A + DA D K + S + Sbjct: 175 DILASDI-----KDVKPERYDKGMDAVQALSQGKVDAVIID---SEVAKKFVEETSGLKV 226 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L + + A AI +G+ E + V+ Sbjct: 227 LDEAFADENYAIAIKKGNKELLDSVNKAL 255 >gi|167463723|ref|ZP_02328812.1| cystine transporter subunit [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383354|ref|ZP_08057144.1| ABC transporter-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152354|gb|EFX45170.1| ABC transporter-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 288 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 77/225 (34%), Gaps = 8/225 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 N+ L IK+ G LK GI + + + GFD D + ++ + ++ Sbjct: 48 NSRTLEQIKQSGVLKVGIMGIYAPYNFLNDKKEMDGFDADIAKEIAKKMGLKAE---FVS 104 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVS 141 LQ+ + D + T + + F + + + I+ + Sbjct: 105 QEFSGMIAGLQAGKFDTVISQMTITE--DRQKQMDFTEPYITNQVKVIVKQDNNSITKLE 162 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 G +I V GT E L + + ++ V R DA ++ AL Sbjct: 163 DFKGKNIGVGLGTNDEAYLRNEALPKVGNFTIKTYDDVITSLQDLNNGRIDATINNMYAL 222 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + ++ + + A A+ +G+TE + ++ Sbjct: 223 KPI--VEKNGFKIKVVGEAVKSDKAAIAVTKGNTELRDALNQALK 265 >gi|260769397|ref|ZP_05878330.1| hypothetical protein VFA_002455 [Vibrio furnissii CIP 102972] gi|260614735|gb|EEX39921.1| hypothetical protein VFA_002455 [Vibrio furnissii CIP 102972] gi|315181928|gb|ADT88841.1| hypothetical binding protein component ofABC transporter [Vibrio furnissii NCTC 11218] Length = 269 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 78/245 (31%), Gaps = 7/245 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +L + S L ++ G LK + G + F +G + GFD Sbjct: 5 MKSTAAGLAVACSLLGANQAMASESALENVLNTGELKVCFDAGYMPFEMKTKDGRYIGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ ++ + + A+ + + DI+ T R + + A Sbjct: 65 IDLGKHMARSMGVKFTPVN---TAWDGIIPAMLTGKCDIIMGGMTVTAERNLKVNFATPY 121 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I + + S L+ + T + K + +++ Sbjct: 122 IVIGQSVVLSPKLEGKVKSYKDLNDPKYTIATKLGTTGV--EAAKKYVPNAKLDLYDTEV 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + DA+ D N+ H L + + PL AI Q D + N Sbjct: 180 DAVLQVVNGKADAFVYDFPYNAIYSAQNEGKVVH--LAEPFTYEPLGWAIRQNDPNFLNF 237 Query: 241 VSWTH 245 + Sbjct: 238 LDNYL 242 >gi|251789976|ref|YP_003004697.1| cationic amino acid ABC transporter periplasmic binding protein [Dickeya zeae Ech1591] gi|247538597|gb|ACT07218.1| cationic amino acid ABC transporter, periplasmic binding protein [Dickeya zeae Ech1591] Length = 243 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 81/248 (32%), Gaps = 25/248 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++ + F++ + ++ F V AN GFD Sbjct: 1 MKKLFIAALF--GSVSFSAGAAE-----------TIRFATEASYPPFESVDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL I + + L+ ++ D + D T R ++F Sbjct: 48 IDLANALCKQI---QATCTFSNQAFDSLIPGLKFRRYDAVIAGMDITPER--QQQVSFSQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K ++ V+ L G + VQ GTT + L D + + ++ + Sbjct: 103 PYYENSALFIAQK-DKLTDVAALKGKRVGVQNGTTHQKFLLD----KHQDITVVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + + L A+ Q + E Sbjct: 158 NAVLDLKNGRLDAVFGDTAVVNDWLKQNPNLASVGNKVTDKDYFGIGLGIAVRQNNDELV 217 Query: 239 NIVSWTHY 246 + Sbjct: 218 KKFNDALN 225 >gi|170691906|ref|ZP_02883070.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia graminis C4D1M] gi|170143190|gb|EDT11354.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia graminis C4D1M] Length = 258 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 86/251 (34%), Gaps = 24/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L ++ + + K+ ++ G++ F A+G GFD Sbjct: 1 MKK--LALCVALAVMATGAMA---------KEWKTVRIGVDASYPPFESKAASGQVVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL + + K ++ + AL+ K+ D + + T R + F Sbjct: 50 VDVTKALCARM---NVKCVWVEQDFDGIIPALKGKKFDAIVSSLTITDKR--REQIDFSD 104 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I + + L G + V+ GTT E Y++ + ++ Sbjct: 105 KLFDAPARMIAKAGSPLLPTAESLKGKRVGVEQGTTQEAYAKAYWEPKG--VTVVPYQNQ 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISK----SPLAPAIIQGD 234 +++ A + R DA D A L R P++ A + + D Sbjct: 163 DQVYADLTSGRLDAALQDEIQADAGFLKTPRGKGFAWAGPEVKDPKTIGEGTAIGLRKDD 222 Query: 235 TEWYNIVSWTH 245 E + + Sbjct: 223 AELKAMFNKAL 233 >gi|120406518|ref|YP_956347.1| polar amino acid ABC transporter inner membrane subunit [Mycobacterium vanbaalenii PYR-1] gi|119959336|gb|ABM16341.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Mycobacterium vanbaalenii PYR-1] Length = 503 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 77/233 (33%), Gaps = 15/233 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61 + +++L I + T+ ++ S ++ G L+ G F+ G G+DV Sbjct: 21 RTVLLAVLAAIAVLLTACGSSGSG-NPVESSGVLRVGTEGVYAPFSYHDPATGQLTGYDV 79 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D RA+ + + ++++ F AL++ + D+++ T R Sbjct: 80 DVARAVGEKLGVN---VEFVETPWDSIFAALEANRFDVVANQVTITPER--QQKYDLSEP 134 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + I+S++ L G Q+ T+ +A A E + Sbjct: 135 YSIGEGVIVTRADDDSITSLADLRGKR-AAQSTTSNWAGVARDAGA-----QIESVEGLT 188 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + A R D D S L + I KS A + Sbjct: 189 QAMALLSQGRVDVVVND-SLSIYAYLAETNDTAVKIAGATGEKSEQGFAARKN 240 >gi|323526373|ref|YP_004228526.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323383375|gb|ADX55466.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 255 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 89/256 (34%), Gaps = 26/256 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F ++LC+ L ++ + + L+ G+ F +G+ GFD Sbjct: 1 MKQLFASTVLCM--LATSACAAD-----------TLRFGVEADYPPFEYKLPSGELAGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + + K +++ + AL++++ D ++ T RE + F Sbjct: 48 IDIGNAICAKL---QVKCRWVENSFDGLIPALEARKFDAINSAMWATEQREK--AIDFTS 102 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y + I + L G I VQ G T + + I + Sbjct: 103 VIYASPIRLVARTGSHILPNAESLKGKRIGVQQGGTQQYYAEQKWAPAG--AVVITYSSQ 160 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 ++ + A R DA + L + + + ++ + A + + D Sbjct: 161 TQVFSDLAAGRVDAALQSQQSAEDSFLKKPEGKDFAFVGEPLTDEKIFGRGVAFGVRKQD 220 Query: 235 TEWYNIVSWTHYAMVT 250 E ++ A+ Sbjct: 221 PELKARLNEAIAALKQ 236 >gi|253574817|ref|ZP_04852157.1| cystine ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] gi|251845863|gb|EES73871.1| cystine ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] Length = 296 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 82/234 (35%), Gaps = 8/234 (3%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 +S +T + +L +IK G +K G+ + + N + GFD D + ++ + Sbjct: 49 GGSSANTGSDLLNEIKTAGVIKVGLMGTYAPYNFLNENKEIDGFDADVAKEVAKRLGVK- 107 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KK 134 +++ P +LQ+ +ID + T R+ + F + I+ Sbjct: 108 --VEFAPQEFSGLIPSLQAGKIDAIISQVTITDERK--QQIDFTQPYITNEVKIIVKEDN 163 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+ + G +I V GT E L + + ++ V A R DA Sbjct: 164 DSITKLEDFKGKNIGVGLGTNDESYLRNDVLPQVGNFEIKTYDDVITSLQDLNAGRIDAT 223 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + + + + + D I AI + + E+ + M Sbjct: 224 INN--LYALKPIVDKNGYKIKAVGDAIKSDQAGIAIRKNNPEFLAALDQALTDM 275 >gi|257790887|ref|YP_003181493.1| extracellular solute-binding protein family 3 [Eggerthella lenta DSM 2243] gi|325832074|ref|ZP_08165171.1| major cell-binding factor [Eggerthella sp. HGA1] gi|257474784|gb|ACV55104.1| extracellular solute-binding protein family 3 [Eggerthella lenta DSM 2243] gi|325486395|gb|EGC88847.1| major cell-binding factor [Eggerthella sp. HGA1] Length = 274 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 81/247 (32%), Gaps = 8/247 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61 + F+ L+ + G L+ G + GF G+ +G +V Sbjct: 4 RRTFIRSSALVASTLVLGGATGGLAGCAGGADVLRVGTKIDVPGFGFQNPETGNIEGMEV 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D R L+ I P ++ +N R L + +D T R+ F Sbjct: 64 DIARELAKRIKGSPDALRVTGVNVTTRGAMLDNGTLDATLATFTITEARKK--SYNFSRP 121 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y D G ++ K GI + L G ++ V TT L + + E Sbjct: 122 YYTDHIGVLVKKSSGIVDLKDLDGKTVGVALSATTRDKLTAAGDEIGIHMSFAEYSTYPE 181 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 I A R DA++ D S L ++L + A + +TE + V Sbjct: 182 IKIALVTGRVDAFSVDRSILNGYV-----DDSTMLLDAQFAPQEYGVATKKSNTELADQV 236 Query: 242 SWTHYAM 248 AM Sbjct: 237 DAAIGAM 243 >gi|194397488|ref|YP_002038042.1| ABC transporter amino acid-binding protein [Streptococcus pneumoniae G54] gi|194357155|gb|ACF55603.1| ABC transporter, amino acid-binding protein [Streptococcus pneumoniae G54] Length = 271 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 79/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L F + + + S + IK++G L F V Sbjct: 4 KKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATXPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K ++ L A+I Q T E + + Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKXTVPESMVKEQLPKA----Q 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + + A A+ + Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234 Query: 233 GDTEWYNIVSWTHY 246 + +V Sbjct: 235 NSDDLKEVVDKVIQ 248 >gi|15612733|ref|NP_241036.1| amino acid ABC transporter (amino acid-binding protein) [Bacillus halodurans C-125] gi|10172782|dbj|BAB03889.1| amino acid ABC transporter (amino acid-binding protein) [Bacillus halodurans C-125] Length = 275 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 34/269 (12%), Positives = 77/269 (28%), Gaps = 31/269 (11%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNA-----------------SILGDIKKRGFLKCGINT 42 M K V++ + S+L ++ G L G Sbjct: 1 MKKILSMVALFFAFTTVLAACGAADQNNEETAGEEEAAEASDSLLAKVQAEGKLLIGTEG 60 Query: 43 GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 F +G+ GFDV+ R ++ + + ++ F L +++ D+++ Sbjct: 61 TYPPFTFHDESGELTGFDVELAREVADRLGVEAD---FMETQWDAMFAGLDAERFDMIAN 117 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLA 161 + F + H I+S + G Q+ T+ LA Sbjct: 118 QVGI--REDRLEKYDFSDHYITSTAVVVTHEDNDEINSFEDIEGKKSA-QSLTSNYADLA 174 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 + A + + + + R D D ++ ++ + Sbjct: 175 REYNA-----EIVGVDGFNQAIELLNSKRVDVTINDNLSVLDFLNNRPNAP-IKMVAEHE 228 Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + +G+ E V+ ++ Sbjct: 229 DAAQSGFMFRKGNEELVEAVNEALAEIIE 257 >gi|157145288|ref|YP_001452607.1| cystine transporter subunit [Citrobacter koseri ATCC BAA-895] gi|157082493|gb|ABV12171.1| hypothetical protein CKO_01025 [Citrobacter koseri ATCC BAA-895] Length = 273 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 84/254 (33%), Gaps = 20/254 (7%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M V + L+ + +L +K+RG L G+ F+ + Sbjct: 8 MKLALLGRQALMGVMAVALVAGMSVKSYADEGLLNKVKERGTLLVGLEGTYPPFSFQGDD 67 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+V+F L+ + P +L SK+ID++ + R+ Sbjct: 68 GKLTGFEVEFAEELAKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I++ + L G + V GT E ++ + + Sbjct: 124 -KYDFSTPYTISGIQALVKKGNEGSINTAADLKGKKVGVGLGTNYE----EWLRQNVQGV 178 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + + S+ A+ Sbjct: 179 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKDTLAVTGEAFSRQEAGVALR 236 Query: 232 QGDTEWYNIVSWTH 245 +G+ + V Sbjct: 237 KGNEDLLKAVDGAI 250 >gi|163938358|ref|YP_001643242.1| extracellular solute-binding protein [Bacillus weihenstephanensis KBAB4] gi|229131356|ref|ZP_04260256.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus BDRD-ST196] gi|229170388|ref|ZP_04298061.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus AH621] gi|163860555|gb|ABY41614.1| extracellular solute-binding protein family 3 [Bacillus weihenstephanensis KBAB4] gi|228613085|gb|EEK70237.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus AH621] gi|228652100|gb|EEL08037.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus BDRD-ST196] Length = 264 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESATTSSNGEKEFRYAMSGLYKPFNYKENDGKLAG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + P+ I + LQSK+ D + + T R ++F Sbjct: 61 FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLQSKKYDAILGSMAITEER--LKAVSF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KHTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|322834152|ref|YP_004214179.1| cationic amino acid ABC transporter periplasmic binding protein [Rahnella sp. Y9602] gi|321169353|gb|ADW75052.1| cationic amino acid ABC transporter, periplasmic binding protein [Rahnella sp. Y9602] Length = 259 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 87/251 (34%), Gaps = 24/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + L TS +A L+ G++ F +G GFD Sbjct: 1 MNK---IPLLIIAALSATSGLAHAET--------TLRFGVDPSFPPFESKAPDGKLVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ K +++ AL +K+ D + T R+ + F Sbjct: 50 IDLGNAICQQA---KVKCEWVETAYDGIIPALNAKKFDAVLSAMSMTPKRKT--QVTFSD 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y I K G+ + L G ++ V GTT E ++ + + ++ Sbjct: 105 MLYHVPSVLIAKKGSGLQPTADSLKGKTVGVAQGTTQEAYAQGEWQKKGVD--VVSYQNQ 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + ++ + R D + +A L + + + ++ + A + + D Sbjct: 163 DFVNQDLASGRIDVTLTNAAAAETGFLKTPEGTGYAFAGEPLNDTRYLGEGTAIGLRKDD 222 Query: 235 TEWYNIVSWTH 245 +++ Sbjct: 223 QAHLTLINNAL 233 >gi|297531645|ref|YP_003672920.1| extracellular solute-binding protein family 3 [Geobacillus sp. C56-T3] gi|297254897|gb|ADI28343.1| extracellular solute-binding protein family 3 [Geobacillus sp. C56-T3] Length = 272 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 68/224 (30%), Gaps = 11/224 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + + G + F + G GFDVD A+ D + F + Sbjct: 40 AKKKIVVGTDAAFAPFEYMD-KGKIVGFDVDLLDAIMKEAGLDYE---LRNIGWDPLFAS 95 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 LQSK++D+ T R+ F + Q ++ + + + L G +I VQ Sbjct: 96 LQSKEVDMGISGITITDERK--QSYDFSDPYFEATQVILVKQGSPVKNALDLKGKTIGVQ 153 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 TT + F H FE DA D + N Sbjct: 154 NATTGQEAAEKLF---GKGPHIKKFETTVVAIMELLNGGVDAVITDNAVANEYVKNNPNK 210 Query: 212 SEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 VI P + + ++E V ++ + + Sbjct: 211 KLQVIEDPKNFASEYYGMIFPK-NSELKAKVDEALKNVINSGKY 253 >gi|269139576|ref|YP_003296277.1| cationic amino acid ABC transporter, periplasmic binding protein [Edwardsiella tarda EIB202] gi|267985237|gb|ACY85066.1| cationic amino acid ABC transporter, periplasmic binding protein [Edwardsiella tarda EIB202] gi|304559464|gb|ADM42128.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Edwardsiella tarda FL6-60] Length = 256 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 84/248 (33%), Gaps = 25/248 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L I + T+ ++ F + A +GFD Sbjct: 14 MKKIIIAAMLAGISVSATAAQ-------------TIRFAAEASYPPFEFMDAQNKMQGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + + + + +L+ K++D + D T R+ + F Sbjct: 61 VDLANAICQQM---KATCTFSNQSFDSLIPSLKFKRVDAVISGMDITPERQK--QVDFSQ 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K ++ V+ L G + +Q GTT + L D P+ ++ + Sbjct: 116 PYYDNSALFIAEKG-KVADVAALKGKRVGIQNGTTHQKYLMDKHPE----LTPVPYDSYQ 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N P + + L A+ +G+ Sbjct: 171 NAILDLKNGRIDAVFGDTAVVNEWMKQNPNLAPVGTKVTDADYFGTGLGIAVRKGNGPLL 230 Query: 239 NIVSWTHY 246 + Sbjct: 231 EQFNAALN 238 >gi|229171201|ref|ZP_04298794.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus MM3] gi|228612281|gb|EEK69510.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus MM3] Length = 264 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESATTSSNGEKEFRYAMSGLYKPFNYKENDGKLAG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + P+ I + LQSK+ D + + T R ++F Sbjct: 61 FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLQSKKYDAILGSMAITEER--LKAVSF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KHTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VKKVNKALDEII 239 >gi|317048961|ref|YP_004116609.1| cationic amino acid ABC transporter periplasmic-binding protein [Pantoea sp. At-9b] gi|316950578|gb|ADU70053.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. At-9b] Length = 260 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 80/254 (31%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L + S L+ G + F A G GFD Sbjct: 1 MKKRVLALSLMLAMSSAASVFAAVP--------HTLRIGTDPTYPPFESKNAQGQLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + I +K Y+ + +L++K+ID + + T R+ + F Sbjct: 53 IDLANEICKRI---KTKCTYVESDFDALIPSLKAKKIDAIISSLSITEKRQEEIA--FSE 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K I ++ L G +I + GTT E +Y++ + P + Sbjct: 108 KLYAANARLVAPKGSTIQPTIESLKGKNIGLLQGTTQETYANEYWRPKGVTVTP--YANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + A R DA D L + + + + + D Sbjct: 166 DLVYQDLNAGRIDAAFQDEVQASEGFLKQPVGKNYAFAGPAVKDDKIFGVGTGMGLRKDD 225 Query: 235 TEWYNIVSWTHYAM 248 + + AM Sbjct: 226 ADLKAAIDKAFDAM 239 >gi|168231389|ref|ZP_02656447.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194469197|ref|ZP_03075181.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194455561|gb|EDX44400.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205334246|gb|EDZ21010.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 246 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 89/260 (34%), Gaps = 28/260 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + + S S L G + + V A+ GFD Sbjct: 1 MKKKLIVMLLASLSVHAASLSAR-----------TLHFGTSATYAPYEFVDADNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + ++ + + +L+ K+ D + D T RE ++F Sbjct: 50 IDVANAVCKEM---QAECSFTNQSFDSLIPSLRFKKFDAVIAGMDMTPKRE--QQVSFSQ 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ +K + + L G + ++ GTT + L D P+ ++ Sbjct: 105 PYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYL 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + +R + GD + A+ ++ I+ + S A+ +G+ Sbjct: 161 NAFTDLKNNRLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKGND 217 Query: 236 EWYNIVSWTHYAMVTAEELG 255 ++ + + E Sbjct: 218 ALLQEINAALDKVKASPEYA 237 >gi|113866798|ref|YP_725287.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113525574|emb|CAJ91919.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia eutropha H16] Length = 273 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 73/229 (31%), Gaps = 13/229 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + + A +L +K+ G LK G+ F A + +GFDVD RA++ + P Sbjct: 26 TAAQAADLLDTVKQAGVLKIGLEGTYPPFGFRGAKNELEGFDVDVARAVAGKLGVKPE-- 83 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--G 136 ++ LQ+ + D++ + T R L F + I K Sbjct: 84 -FVTTEWSGIIAGLQAGKFDVIVNQVNVTPQR--QQVLDFSTPYVYSDAQLIQRKDDKRQ 140 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 S+ L G + V G+ + E A R DA Sbjct: 141 FKSLEDLKGHKLGVSLGSNFND-----LAKSVPGIDVKTYPGAPEYLRDLAAQRVDAALN 195 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D + A + + + +A + + ++ ++ Sbjct: 196 DR-LMVAYLVKTANLPLRPGAIVAGATTQVAIPFRKDNPKFAQAINHAL 243 >gi|111018890|ref|YP_701862.1| ABC amino acid transporter, periplasmic binding protein [Rhodococcus jostii RHA1] gi|110818420|gb|ABG93704.1| ABC amino acid transporter, periplasmic binding protein [Rhodococcus jostii RHA1] Length = 262 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 81/237 (34%), Gaps = 16/237 (6%) Query: 1 MYKDF---FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + +++L + L S + ++ +++ G LK G F+ +G Sbjct: 1 MRRTLPAVLITVLTALSLAGCGNSDSGPVIDQVREAGVLKVGTEGTYTPFSYQGPDGQLT 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+DVD RA+ + +++ F L++K+ D+++ R + Sbjct: 61 GYDVDVIRAVGDKLG---VSVEFTQTPWDSIFAGLEAKRYDLVANQVTVNDER--TQKYD 115 Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + + I+S++ L+G + Q+ T+ +A A+ Sbjct: 116 LSTPYTYSEGVIVTRADDNSITSLADLNGKTTA-QSATSNWAQVARDAGAN-----VESV 169 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 E + + R DA D A + + + S A A + Sbjct: 170 EGFVQAITLLKDGRVDATVNDN-LAVAEYQKQTSDTGVKVAAETGDTSEQAFAARKD 225 >gi|52144879|ref|YP_081948.1| amino acid ABC transporter, substrate-binding protein [Bacillus cereus E33L] gi|51978348|gb|AAU19898.1| amino acid ABC transporter, substrate-binding protein [Bacillus cereus E33L] Length = 264 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 80/252 (31%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + P+ I + L++K+ D++ + T R + F Sbjct: 61 FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + + ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKNLVT------KHTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|16125690|ref|NP_420254.1| cystine transporter subunit [Caulobacter crescentus CB15] gi|13422806|gb|AAK23422.1| cystine ABC transporter, periplasmic cystine-binding protein [Caulobacter crescentus CB15] Length = 261 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 48/228 (21%), Positives = 78/228 (34%), Gaps = 14/228 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 AS IK G L+ G+ F +G GF+VDF +AL+ + + Sbjct: 27 AGASGWDRIKASGKLRVGLEGTYPPFNFQDKSGQLAGFEVDFAKALAEQLGVKAE---FS 83 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P +L+S +ID++ T R+ F G I K K + Sbjct: 84 PAPFAGLLGSLESGRIDVVINQITITPDRQA--KYDFSEPYTVSGIQIIALKGKPAPTGP 141 Query: 142 Q-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+G + V GT E L +A+ ++ RA R DA D Sbjct: 142 EGLTGKKVGVGLGTNYEQWL----RANVPTADVRTYDDDPTKYQDLRAGRIDAVLNDRLV 197 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 T+ E V + A+ + D +++ A+ Sbjct: 198 AADFVKTSP---EFVASGQPFAAQGSGVAMQK-DPALKVVINQAINAL 241 >gi|15889178|ref|NP_354859.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15156996|gb|AAK87644.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 257 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 85/254 (33%), Gaps = 21/254 (8%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++ + + + S + A + G F ++A+G GFD+D + Sbjct: 7 LLAAVSIAAISLLSGAALAQ--------DKIVIGTEGAYPPFNNLEADGTLTGFDIDIAK 58 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL + ++ ++ + ALQ+K+ D + + T R + F Y Sbjct: 59 ALCEQM---KAECTFVTNDWDGIIPALQAKKFDAIIASMSITPER--LQKVDFSKKYYNT 113 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + K I S+ L G S+ Q TT +F ++ +E Sbjct: 114 PPAIAVPKDSPIKSIDDLKGKSLGAQGSTTHSNYAEKHFP----DADVKMYPTADEYKLD 169 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWYNIV 241 R DA DI L T+ ++ P + A+ +GDT + Sbjct: 170 IANGRIDAVIDDIVVLSEWLKTDAGKCCKILTPLKVDPEINGNGAGIAVRKGDTALADKF 229 Query: 242 SWTHYAMVTAEELG 255 + + + + Sbjct: 230 TAAIAGIRASGKYQ 243 >gi|311031015|ref|ZP_07709105.1| amino acid ABC transporter, amino acid-binding protein [Bacillus sp. m3-13] Length = 263 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 94/262 (35%), Gaps = 18/262 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKAN-- 53 M K F S++ ++++ S + + G L G + F + Sbjct: 1 MKKWFLYSLISILVVGLLSACGTSGNGDETSGEGEDGKKVLVMGTSADYPPFEYIDTEVG 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFDVD +A++ + + ++ ++ A++S ID++ T R Sbjct: 61 EEIIGFDVDLAKAITEELGYE---LKVQDMDFGSLITAMKSGNIDLILAGMTPTEERAE- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + Y + K I+S+ L G ++ VQ G+ + + N+ Sbjct: 117 -QVDFTNVYYTANHMIVSLKDSNITSLEDLVGKTVGVQMGSIQYDKAEEIAEEVNITIEN 175 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +R+ +I + R DA + + + ++ + + A A+ +G Sbjct: 176 R--DRIPQIVQDLKTGRFDAAIIEDTVMKGF---MEKDEDLTGFTLESDEEGSAIALPKG 230 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 +E + M E+ Sbjct: 231 -SELTEEFNRVLKEMEENGEME 251 >gi|168491297|ref|ZP_02715440.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC0288-04] gi|221232134|ref|YP_002511287.1| putative extracellular amino acid-binding protein [Streptococcus pneumoniae ATCC 700669] gi|183574399|gb|EDT94927.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae CDC0288-04] gi|220674595|emb|CAR69158.1| putative extracellular amino acid-binding protein [Streptococcus pneumoniae ATCC 700669] Length = 271 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 80/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L F + + + S + IK++G L + F V Sbjct: 4 KKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E + + DA D + N + + + A A+ + Sbjct: 175 LTSLTNMGEAVNELQVGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234 Query: 233 GDTEWYNIVSWTHY 246 + +V Sbjct: 235 NSDDLKEVVDKVIQ 248 >gi|21221120|ref|NP_626899.1| sugar-binding protein [Streptomyces coelicolor A3(2)] gi|20520796|emb|CAB71196.2| putative sugar-binding protein [Streptomyces coelicolor A3(2)] Length = 352 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 87/273 (31%), Gaps = 18/273 (6%) Query: 16 FFTSFSTNASILGDIKKR----GFLKCGINTGLVGFAEVKANG----DWKGFDVDFCRAL 67 + + I+ R L G++ + N + +GFD+D + Sbjct: 76 TLAPSGDDGPTIDRIRAREGEKRKLIVGVDQNSFRWGYRDPNSGGDAELEGFDIDLAHRI 135 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + D +Q+ + +R A+Q ++D++ R + +AF + GQ Sbjct: 136 AKDVLGDEDAVQFKAIPTDQRVPAIQDGRVDMVVRTMTINC--DRLEDVAFSAPYFRTGQ 193 Query: 128 GFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHP---IVFERVEEID 183 + K I+ L+G IC AG+T TL K + + Sbjct: 194 QVLAPKSSKITGYDGTLAGKEICTAAGSTALSTLEQDQKDGRLAEGVDLRTTVPNQLDCL 253 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + DA D + + + + D + A+ + + V+ Sbjct: 254 VRLQLGEVDAVVTDGALAASQAAQDP---TVELKGDAFTTEYYGVAMKKDADDLVRRVNR 310 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 A+ Q + + +T + + Sbjct: 311 VLEQW-RADRADGWQHSYEEWLSETMDDPAKSL 342 >gi|293609591|ref|ZP_06691893.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828043|gb|EFF86406.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 257 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 83/256 (32%), Gaps = 22/256 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L L + + K ++ G + F +G GFD Sbjct: 1 MKKMFVSTTLVLAAVATNVQA---------KDWKVIRFGTESSYAPFEYKTPDGKLTGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + + +K ++ + AL++K+ D + + T R + F Sbjct: 52 VDLGNAICAKL---KAKCVWVENSFDGMIPALKAKKFDGILSSMTVTDERAKQIA--FSS 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K + S + L G + VQ GT E Y+ + + Sbjct: 107 KIYNTPTRMVAKKGSPLLSTAASLKGKRVGVQQGTIQETYAKTYWAPKG--VTVVPYPVQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + R DA D + L + + + A + + D Sbjct: 165 DLIYQDMMSGRLDATLQDAIMVDGAFLKQPKGKNFSFAGGNVVDAKTLGVGAAIGLRKED 224 Query: 235 TEWYNIVSWTHYAMVT 250 + ++ A++ Sbjct: 225 ADLKANINKALAAIIA 240 >gi|257461486|ref|ZP_05626582.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257441209|gb|EEV16356.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 268 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 93/246 (37%), Gaps = 18/246 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K IL + S A+ L +I++ G ++ G+ F++ +G ++GF+ Sbjct: 1 MKKIIL------GILLLFTSSVVANTLSEIRQSGSVRVGVFEAQPPFSKF-EDGKFQGFE 53 Query: 61 VDFCRALSSAIF-DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 V ALS IF K++++P+ A ER L+ ++D++ T R + F Sbjct: 54 VTLAEALSKDIFGGKAGKVEFVPVKASERLKVLEENKVDMVLATFTITNER--KQLVDFT 111 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + I +VS L G I + GTT E + I Sbjct: 112 TPYFAVNIGVLTRAGDRIKTVSDLHGKPIIAETGTTGEAYFR------KEGFEIINCATA 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E + + Y D + A + V + ++ L A+ +G+ + Sbjct: 166 NECYKMLKDGKGIGYATDNLIVLAYAVI--DSDTEVNIKNLGVSDFLGIAVSKGNKDLLE 223 Query: 240 IVSWTH 245 ++ Sbjct: 224 FLNGEL 229 >gi|15807591|ref|NP_296329.1| amino acid ABC transporter periplasmic amino acid-binding protein [Deinococcus radiodurans R1] gi|6460438|gb|AAF12147.1|AE002090_3 amino acid ABC transporter, periplasmic amino acid-binding protein [Deinococcus radiodurans R1] Length = 253 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 84/246 (34%), Gaps = 16/246 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M VS L L +L F + + L IKK G L F + GF+ Sbjct: 1 MKLKS-VSTLALAMLAFGAPAAARD-LTSIKKSGTLVVATEPTYPPFTYTQGK-KIVGFE 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + L+ + +++ + + L + D++ + T R+ + F Sbjct: 58 AELAELLAKQLGVK---VEWKSSSFDTLLIGLGQGRYDMVIASHGITPERQK--AVDFSN 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ++ G ++ K G +++ + G + VQ GTT A ++ + + Sbjct: 113 P-HYCSGGVLVSKPGGPKTLADMKGKKLAVQLGTTY----ATRARSLPGLGNIQTYPNNT 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A R DAY D + + L + + + A + + + Sbjct: 168 DALQALMAGRTDAYLTDRFVALEARKKTGGKLQIGAL---VFQEKIGIAFQKDNKSLTSA 224 Query: 241 VSWTHY 246 V+ Sbjct: 225 VNAALK 230 >gi|302522281|ref|ZP_07274623.1| glutamate binding periplasmic protein [Streptomyces sp. SPB78] gi|318060994|ref|ZP_07979715.1| glutamate binding periplasmic protein [Streptomyces sp. SA3_actG] gi|318077284|ref|ZP_07984616.1| glutamate binding periplasmic protein [Streptomyces sp. SA3_actF] gi|302431176|gb|EFL02992.1| glutamate binding periplasmic protein [Streptomyces sp. SPB78] Length = 280 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 85/255 (33%), Gaps = 12/255 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVKANGD 55 M + + +++ + S D + GI G + +G Sbjct: 1 MKFRKVSAAVAVVLTVGLAASACGKNDDDKASGGSGGGKKITIGIKFDQPGLGQKLPSGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFDVD ++ A+ ++I + + +R L+ +D ++ + T RE Sbjct: 61 FAGFDVDVATYVAKALGYKTNQIVWKEAKSADRETMLERGDVDFIAASYSITDEREA--K 118 Query: 116 LAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F Q ++ + I+ L+ +C G+T+ + K K Sbjct: 119 VDFAGPYLLAHQDILVRSDEKEINDPKDLNSKRLCSVTGSTSAQNIK---KELAPKAQLQ 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E DA T D S L + + + ++ + +G Sbjct: 176 EYGGYSECLTGLENKAVDALTTDDSILAGYAAQKEFQGKFKLAGFKMTNENYGIGVKKG- 234 Query: 235 TEWYNIVSWTHYAMV 249 ++ + ++ MV Sbjct: 235 SDLKDKINDALKKMV 249 >gi|239833266|ref|ZP_04681594.1| Histidine-binding protein precursor [Ochrobactrum intermedium LMG 3301] gi|239821329|gb|EEQ92898.1| Histidine-binding protein precursor [Ochrobactrum intermedium LMG 3301] Length = 270 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 83/255 (32%), Gaps = 9/255 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F V + +L A DI ++ + + + AN G D Sbjct: 6 MLKRFLVLSIVGAMLTAQGVPAMADTYADIIAAKKIRVSTDLAIPPSGMLDANLKPVGSD 65 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ + L+ +++++ R LQ+ + DI+ T R + + F Sbjct: 66 VETAQLLAKD---WGVELEFIQTTGATRIPNLQTNKADIVISTLSVTPER--AQVIDFSK 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 K I+ + L G S+ V GTT + L H ++ Sbjct: 121 PYAGLVSVIAAPAKSPINDWADLKGQSVTVTRGTTQDSELTKLAGEHGF--TVTRYDDDA 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + + A + ++ + P+ I LA + + + E + Sbjct: 179 TMVTAAVSGQAKAIATSATL--VKQIHDKNPTLAFEPKITIRVLNLAIGVNKNEPELLSK 236 Query: 241 VSWTHYAMVTAEELG 255 + A + +L Sbjct: 237 LDEWVVANLQNGKLN 251 >gi|228957268|ref|ZP_04119034.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802459|gb|EEM49310.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 265 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 33/254 (12%), Positives = 71/254 (27%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G + AD K + Sbjct: 116 QKKYDFSKPYISSSAALVIAKDKDKPATFADVKGLKGA----QSLMSNYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 I E + + R D D ++ T ++ + + Sbjct: 170 EIIGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G + V Sbjct: 229 KGSDKLVQEVDKAL 242 >gi|307068048|ref|YP_003877014.1| amino acid ABC transporter/signal transduction system periplasmic domain-containing protein [Streptococcus pneumoniae AP200] gi|306409585|gb|ADM85012.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Streptococcus pneumoniae AP200] Length = 271 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L F + + + S + IK++G L + F V Sbjct: 4 KKWIFVLCNFLASFFLVACQSGSNGSQSAVEVIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K ++ L A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKA----Q 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + + A A+ + Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234 Query: 233 GDTEWYNIVSWTHY 246 + +V Sbjct: 235 NSDDLKEVVDKVIQ 248 >gi|257459777|ref|ZP_05624886.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257443202|gb|EEV18336.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 267 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 45/236 (19%), Positives = 93/236 (39%), Gaps = 11/236 (4%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 L+ + A L I+ +G ++ G+ G F+E+ +G ++GF+V +A+++ Sbjct: 3 LLLAMLLPFIVAFADSLEQIRSKGVVRIGVYDGQPPFSELN-DGTFEGFEVTMAQAIAND 61 Query: 71 IFDD-PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 +F + +I+ +P+ ++R AL + ++DI+ T R + + F + G Sbjct: 62 LFGEKGGRIELVPMKVEDRIPALVNNRVDIVIATITITPER--AQQIDFSTPYFSVNLGV 119 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + K I S++ L I +++G T E + E + Sbjct: 120 LTRKADRIKSLADLREKRILLESGGTGEAFFKQEGFGNFTFCKIAR-----ECYRMLKDG 174 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 DAY D A + V L + + + +G+ E + V+ Sbjct: 175 DVDAYATDNLIAMAYPVV--DSEVEVPLKTLGKPDFMGIGVQKGNKELLDFVNAEL 228 >gi|270284246|ref|ZP_05965800.2| glutamate-binding protein [Bifidobacterium gallicum DSM 20093] gi|270277400|gb|EFA23254.1| glutamate-binding protein [Bifidobacterium gallicum DSM 20093] Length = 286 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 88/220 (40%), Gaps = 9/220 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + G ++ GI G +G ++GFDVD R +++++ + I + K+R Sbjct: 43 EEGKIRIGIKFDQPGLGFK-KSGTYEGFDVDVARYIANSLGYSDADIVWKEAPPKQREAM 101 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150 LQ+ +D++ T R+ ++F + GQ ++ I L+G +C Sbjct: 102 LQNGDVDMILATYSITDARK--QAVSFAGPYFVAGQDLMVRADDDSIKGPQDLNGKRLCS 159 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 G+T+ +T+ + F + + + E A + DA T D L L + Sbjct: 160 VTGSTSAVTVKEKFAS---EVQLMEQPSYAECATALFSGIVDAVTTDDIILAGLAANSRG 216 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 ++ ++ I +GDTE ++ M+ Sbjct: 217 K--LKVVGQPFTEEYYGVGIKKGDTELATKINAAITEMIE 254 >gi|167553557|ref|ZP_02347306.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168244868|ref|ZP_02669800.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263294|ref|ZP_02685267.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467068|ref|ZP_02700916.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168822518|ref|ZP_02834518.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194444606|ref|YP_002043609.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450279|ref|YP_002048397.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197251742|ref|YP_002149268.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197263087|ref|ZP_03163161.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198246245|ref|YP_002218238.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200388042|ref|ZP_03214654.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|224586195|ref|YP_002639994.1| arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238910512|ref|ZP_04654349.1| probable arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|194403269|gb|ACF63491.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408583|gb|ACF68802.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|195630522|gb|EDX49134.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197215445|gb|ACH52842.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241342|gb|EDY23962.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197940761|gb|ACH78094.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199605140|gb|EDZ03685.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205322022|gb|EDZ09861.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205336334|gb|EDZ23098.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205341108|gb|EDZ27872.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347863|gb|EDZ34494.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|224470723|gb|ACN48553.1| probable arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|320088781|emb|CBY98539.1| Arginine-binding periplasmic protein 1 Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|326630270|gb|EGE36613.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 246 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 89/260 (34%), Gaps = 28/260 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + + S S L G + + V A+ GFD Sbjct: 1 MKKKLIVMLLASLSVHAASVSAR-----------TLHFGTSATYAPYEFVDADNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + ++ + + +L+ K+ D + D T RE ++F Sbjct: 50 IDVANAVCKEM---QAECSFTNQSFDSLIPSLRFKKFDAVIAGMDMTPKRE--QQVSFSQ 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ +K + + L G + ++ GTT + L D P+ ++ Sbjct: 105 PYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYL 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + +R + GD + A+ ++ I+ + S A+ +G+ Sbjct: 161 NAFTDLKNNRLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKGND 217 Query: 236 EWYNIVSWTHYAMVTAEELG 255 ++ + + E Sbjct: 218 ALLQEINAALDKVKASPEYA 237 >gi|308186180|ref|YP_003930311.1| glutamine-binding periplasmic protein precursor glnH [Pantoea vagans C9-1] gi|308056690|gb|ADO08862.1| Glutamine-binding periplasmic protein precursor glnH [Pantoea vagans C9-1] Length = 248 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 86/251 (34%), Gaps = 21/251 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M VS+ L + F S + L +T V F + + + GFD Sbjct: 1 MKSLLKVSVAALALAFSLSSTAAE---------KKLVVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + D P++ ALQ++ +D+ T R+ + F Sbjct: 51 VDLWDAIAKELKLDY---TLKPMDFSGIIPALQTRNVDLALAGITITEERKK--AIEFSD 105 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I +S L+G + V++GT + +Y KA+ F + Sbjct: 106 GYYKSGLQVMVRNNENNIKGISDLNGKVVAVKSGTGSV----EYAKANIKSKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + +R DA D + T + + D I A +G + Sbjct: 162 DSAYMELGTNRADAVLHDTPNILYFIHTAGKGR-FKAVGDSIEAQQYGIAFPKGSDDLRE 220 Query: 240 IVSWTHYAMVT 250 V+ + Sbjct: 221 KVNGALKTLKE 231 >gi|289811360|ref|ZP_06541989.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 235 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 80/249 (32%), Gaps = 25/249 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + + G++ F + A+ GFD Sbjct: 1 MKKLVLAALLASFATGSIAAE-------------KINFGVSATYPPFESLDASNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + ++ + AL+ ++ D + D T R + F Sbjct: 48 IDLATALCKQM---QAECTFTNHAFDSLIPALKFRKYDAVISGMDITPERSKQVA--FSN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++ KK + + L G I ++ GTT + L D + ++ + Sbjct: 103 PY-YANSALVIAKKDTYKTFTDLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + TN + P+ + + L A+ + Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPQLGPATEKVTDPQYFGTGLGIAVRPDNKALL 217 Query: 239 NIVSWTHYA 247 ++ A Sbjct: 218 EKLNNALAA 226 >gi|47569426|ref|ZP_00240108.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Bacillus cereus G9241] gi|228983610|ref|ZP_04143814.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|47553934|gb|EAL12303.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Bacillus cereus G9241] gi|228776095|gb|EEM24457.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 264 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESATTSSNGEKEFRYAMSGLYKPFNYKENDGKLAG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + P+ I + L++K+ D++ + T R + F Sbjct: 61 FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKALVA------KHTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|296103152|ref|YP_003613298.1| arginine transporter, periplasmic binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057611|gb|ADF62349.1| arginine transporter, periplasmic binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 243 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 84/247 (34%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALLASFSLSATAAQ-------------TIRFATEASYPPFESIDANNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ID + D T RE + F Sbjct: 48 VDLANALCKEI---DATCTFSNQAFDSLIPSLKFRRIDAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K +SV QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFIGQKG-KFTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + ND+ P + + L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWLKANDKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217 Query: 239 NIVSWTH 245 + Sbjct: 218 QKFNAAL 224 >gi|256785609|ref|ZP_05524040.1| bifunctional protein [Streptomyces lividans TK24] gi|289769505|ref|ZP_06528883.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|289699704|gb|EFD67133.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 691 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 77/226 (34%), Gaps = 2/226 (0%) Query: 32 KRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 R L G G + + G W GFDVD AL+ + +++ + + R Sbjct: 438 ARKRLTIGAKEDQPGLSFYNKDTGVWSGFDVDIAYALAGKLGYGKAQVDFYGVTTANRAS 497 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS-IC 149 L++ ++D++ + T RE G++F Y G ++ K + + Sbjct: 498 KLKNGEVDLVVASYSMTPEREKRDGISFVGPYYKAGSSLLVRKNSAKYDLGEAVDVKRNR 557 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ T + T AD + + +E R Y + + Sbjct: 558 VEVCTARDSTYADRLEEDGYTTGKWQPDTYKECVERLLDKRSSVYAVASDDVLLAGYAQN 617 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 P+ +LP P A+ + D + V ++ +E Sbjct: 618 DPAHLKLLPSGAGTEPYGVAMRKDDPLLKSKVCSGLQEILAGKEWA 663 >gi|145632444|ref|ZP_01788179.1| CTP synthetase [Haemophilus influenzae 3655] gi|145634238|ref|ZP_01789949.1| CTP synthetase [Haemophilus influenzae PittAA] gi|229843881|ref|ZP_04464022.1| amino acid ABC transporter periplasmic-binding protein [Haemophilus influenzae 6P18H1] gi|144987351|gb|EDJ93881.1| CTP synthetase [Haemophilus influenzae 3655] gi|145268682|gb|EDK08675.1| CTP synthetase [Haemophilus influenzae PittAA] gi|229812875|gb|EEP48563.1| amino acid ABC transporter periplasmic-binding protein [Haemophilus influenzae 6P18H1] Length = 257 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 83/249 (33%), Gaps = 13/249 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L + F++FS I ++K L G F +G GFD Sbjct: 1 MKKLLFTTALLTGAIAFSTFSHAGEIADRVEKTKTLLVGTEGTYAPFTFHDKSGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R ++ + K+++ + L +K+ D+++ T E +F Sbjct: 61 VEVIRKVTEKLG---LKVEFKETQWDAMYAGLNAKRFDVIANQT--NPSPERLKKYSFTT 115 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + I S L G + KA +V + + Sbjct: 116 PYNYSGGVIVTKSSDNSIKSFEDLKGRKSA----QSATSNWGKDAKAAG--AQILVVDGL 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R +A D A+ + I D K+P A A +QG+ Sbjct: 170 AQSLELIKQGRAEATINDKLAVLDYFKQHPNSG-LKIAYDRGDKTPTAFAFLQGEDALIT 228 Query: 240 IVSWTHYAM 248 + A+ Sbjct: 229 KFNQVLEAL 237 >gi|319650478|ref|ZP_08004618.1| amino acid ABC transporter [Bacillus sp. 2_A_57_CT2] gi|317397659|gb|EFV78357.1| amino acid ABC transporter [Bacillus sp. 2_A_57_CT2] Length = 273 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 76/267 (28%), Gaps = 29/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFS----------------TNASILGDIKKRGFLKCGINTGL 44 M K F ++L +L + + ++ G L G Sbjct: 1 MKKTLFTAVLICFVLIISGCGTNKANPDNQDQPASEEQEQDLWKKVQDEGKLLIGTEGTY 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F G+ GFDV+ + ++ + P +L F L SK+ D+++ Sbjct: 61 PPFTFHDDKGELTGFDVEISKEVAKRLGLKPE---FLETQWDAMFAGLDSKRFDMIANQV 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADY 163 + F I H + +SS + G Q+ T+ LA Sbjct: 118 GI--RPDRQEKYDFSDPYISSAAVLITHESNESVSSFEDIEGLK-AAQSMTSNYADLAKS 174 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + A + + + + R D D + K I + Sbjct: 175 YGA-----EIVGVDGFNQAIELINSKRADVTLNDNLSFLDFKKHKPDAPV-KIADESEDA 228 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVT 250 S +G N V+ MV Sbjct: 229 SQSGLMFRKGSDTLVNEVNKALTEMVE 255 >gi|227892707|ref|ZP_04010512.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ultunensis DSM 16047] gi|227865484|gb|EEJ72905.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ultunensis DSM 16047] gi|323466211|gb|ADX69898.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus H10] Length = 286 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 100/260 (38%), Gaps = 30/260 (11%) Query: 2 YKDF--FVSILCLIILFFTS----------------FSTNASILGDIKKRGFLKCGINTG 43 K F +S++ +++ ++ +N + + IK+RG+++ G+ Sbjct: 4 RKIFNTIISVIAAVVVLASAYMGLTKPYLARSAGGGGWSNNNSVTQIKRRGYIRIGVYGD 63 Query: 44 LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 L + V + G GFD+ R L+ + P ++ LN R AL S ++D++ N Sbjct: 64 LPPYGWVNSQGKRVGFDLRLARELAKELGVKP---RFTQLNGNNRVDALNSNKVDMVLAN 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R + F G + K I+S QL G + + G+T E Sbjct: 121 FTKTPERAEV--VDFAHPYMKVSTGVVSPKSHPITSEKQLRGKQLILLKGSTGENYF--- 175 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 A+ + F+ + A + R A D S LYA P V + I Sbjct: 176 --ANRPGIKLLRFDSETQQFNAMKNKRGAALADDNSYLYAWI--KKNPQYVVGIRSIGPH 231 Query: 224 SPLAPAIIQGDTEWYNIVSW 243 +APA+ +G+ + Sbjct: 232 QFIAPAVKKGNKSLLKWTNK 251 >gi|313622703|gb|EFR93059.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria innocua FSL J1-023] Length = 247 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 94/256 (36%), Gaps = 24/256 (9%) Query: 1 MYKDF---FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K F +IL + I F+ + T L I+++G L G++ + Sbjct: 1 MQKHVLQKFAAILLIFIFVFSGFTTVFAADTQDETLTKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKVVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F F Q ++ K +SV+ +G + Q TT E + Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVIRKTDKEKFTSVNDFNGIKVGAQKQTTQEELAKNEL-- 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++V ++ ++++ DA + A + + I SK Sbjct: 174 --VGSDVVSLQKVPDLILNLKSNKLDAVVLEGPVAEAYISQDKTLALADIKFVNGSKE-T 230 Query: 227 APAIIQGDTEWYNIVS 242 A A+ +G T V+ Sbjct: 231 AIAMPKGSTALQEKVN 246 >gi|327183916|gb|AEA32363.1| amino acid ABC transporter periplasmic protein [Lactobacillus amylovorus GRL 1118] Length = 286 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 100/260 (38%), Gaps = 30/260 (11%) Query: 2 YKDF--FVSILCLIILFFTS----------------FSTNASILGDIKKRGFLKCGINTG 43 K F +S++ +++ ++ +N + + IK+RG+++ G+ Sbjct: 4 RKIFNTIISVIAAVVVLASAYMGLTKPYLARSAGGGGWSNNNSVTQIKRRGYIRIGVYGD 63 Query: 44 LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 L + V + G GFD+ R L+ + P ++ LN R AL S ++D++ N Sbjct: 64 LPPYGWVNSQGKRVGFDLRLARELAKELGVKP---RFTQLNGNNRVDALNSDKVDMVLAN 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R + F G + K I+S QL G + + G+T E Sbjct: 121 FTKTPERAEV--VDFAHPYMKVSTGVVSPKSHPITSEKQLRGKQLILLKGSTGENYF--- 175 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 A+ + F+ + A + R A D S LYA P V + I Sbjct: 176 --ANRPGIKLLRFDSETQQFNAMKNKRGAALADDNSYLYAWI--KKNPQYVVGIRSIGPH 231 Query: 224 SPLAPAIIQGDTEWYNIVSW 243 +APA+ +G+ + Sbjct: 232 QFIAPAVKKGNKSLLKWTNK 251 >gi|294679058|ref|YP_003579668.1| polar amino acid ABC transporter periplasmic polar amino acid-binding protein [Rhodobacter capsulatus SB 1003] gi|294477874|gb|ADE87261.1| polar amino acid ABC transporter, periplasmic polar amino acid-binding protein [Rhodobacter capsulatus SB 1003] Length = 278 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 38/243 (15%), Positives = 86/243 (35%), Gaps = 13/243 (5%) Query: 7 VSILCLIILFFTSFSTNASIL----GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + L L + S + A IK+ G ++ G+ F +G G +++ Sbjct: 8 LGALLLAGVTALSGAAQAQDFPPLPAAIKEAGKIRIGVKCDSPPFGASGPDGKPLGIEIE 67 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R + + F + + + ++ R +L S ++D++ T R + + I Sbjct: 68 MARKIGTFAFGSEAGAELSCVTSEARIPSLNSGKLDLILATLGRTPAR--MDVIDYSDIY 125 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 ++ ++ + +++ LSG ++ V G T L A+ + + Sbjct: 126 FWGSSNVLVPADSPVKTLADLSGKTVIVVKGATQIKWLE----ANIPGIEILQLNTTADG 181 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + R D + GD +Y L E ++ + + + + + E V Sbjct: 182 VQALKQGRADGFVGDGGLVYTL---AGNYPETRVVEEGLDLGVNGIGLRKNEPELKAFVD 238 Query: 243 WTH 245 Sbjct: 239 AAL 241 >gi|270292476|ref|ZP_06198687.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M143] gi|331266107|ref|YP_004325737.1| ABC transporter substrate-binding lipoprotein [Streptococcus oralis Uo5] gi|270278455|gb|EFA24301.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M143] gi|326682779|emb|CBZ00396.1| ABC transporter substrate-binding lipoprotein [Streptococcus oralis Uo5] Length = 271 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 81/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K V L + + + + S + IK++G L + F V Sbjct: 4 KKWILVVCSMLASMVLVACQSGTDSSQSAVDAIKQKGKLVVATSPDYAPFEFQALVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAIAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K ++ L+ A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKMSFLVRKADLDKYKDLTSLASANIAAQKGTVPETMVKEQLP----NAQ 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + A AI + Sbjct: 175 LTSLANMGEAVNELQAGKVDAVHMDEPVALSYAGKNSDLVVASVNLTMKDGEANAVAIKK 234 Query: 233 GDTEWYNIVSWTHY 246 ++ +V Sbjct: 235 NQSDLKAVVDKVIQ 248 >gi|265983956|ref|ZP_06096691.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13] gi|264662548|gb|EEZ32809.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13] Length = 282 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 77/252 (30%), Gaps = 20/252 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + F C +I+ F + ++ L G F + +G GFDVD Sbjct: 22 RGFKRIAACAVIVGFAAIGAA-----RAEEPLKLVIGTEGAYPPFNFINPDGSLSGFDVD 76 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 RAL + ++ ++ ALQ+ + D + T R+ + F Sbjct: 77 IARALCDEM---KAECTFITQEWDGTIPALQAGKFDAYVSSMSITEERKK--QVDFSDKY 131 Query: 123 YFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G K I + L+G +I VQ TT F + E Sbjct: 132 YNTPLGVAAPKDTDIKGVTKEDLAGKTIGVQVSTTHANYAEQVF----TDSTIKAYPTAE 187 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV----ILPDIISKSPLAPAIIQGDTE 236 E R DA D L T D + D I + A +G E Sbjct: 188 EYRLDLANGRLDAVNDDSVTLSEWLKTPDGACCKMVGTYPPDDAIHGVGVGVAFKKGRPE 247 Query: 237 WYNIVSWTHYAM 248 + A+ Sbjct: 248 LVEKFNAAIKAI 259 >gi|55821470|ref|YP_139912.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus thermophilus LMG 18311] gi|55737455|gb|AAV61097.1| polar amino acid ABC uptake transporter substrate binding protein [Streptococcus thermophilus LMG 18311] Length = 265 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 35/261 (13%), Positives = 75/261 (28%), Gaps = 15/261 (5%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K F ++ L + IK+ + + F V Sbjct: 1 MKKFWFMLTALVATCFLVACRGSQGVSTKTIKENKKIVLATESEFAPFEFKSLVNGKDTL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+ + +++ ++ ++QS + DI T R+ Sbjct: 61 VGADIELAKAIGKKLGVK---VEFSVMSFDNVLASVQSGKADIAIAGISVTDERKKV--Y 115 Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K +S L+ ++ Q G+ E F + Sbjct: 116 DFSDSYYTSENVVIVKKDKVNDFTSADSLAKQTVGTQKGSVQETVAKKQFSKA----SVV 171 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E+ ++ + A + + ND + A AI +G Sbjct: 172 SLASNGEMINELKSGQIQAVVLEKAIAEGYIAQNDALTLASFNLKSDGSDAYAVAIRKGS 231 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + ++ + + Sbjct: 232 DDLLKEINAVIKETKESGKFD 252 >gi|330971782|gb|EGH71848.1| cystine transporter subunit [Pseudomonas syringae pv. aceris str. M302273PT] Length = 221 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 69/209 (33%), Gaps = 8/209 (3%) Query: 2 YKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F S + L++ + L IK G L G+ F+ V +G GF+ Sbjct: 7 RRTFLFSAMGLMLSAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F AL+ + + P AL S+++D++ + R+ + Sbjct: 67 VEFSEALAKELGVKA---KIQPSKWDGILAALDSRRLDVVINQVTISDERKKKYDFSEPY 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + I S LSG + V GT E ++ KA+ ++ Sbjct: 124 TISGIQALVLKKNADTIKSAKDLSGKKVGVGLGTNYE----EWLKANVPGAIVKTYDDDP 179 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND 209 R DA D A + Sbjct: 180 SKIQDLSVGRIDAILVDRLAALEMAAKTK 208 >gi|317472160|ref|ZP_07931492.1| extracellular solute-binding protein, family 3 [Anaerostipes sp. 3_2_56FAA] gi|316900564|gb|EFV22546.1| extracellular solute-binding protein, family 3 [Anaerostipes sp. 3_2_56FAA] Length = 265 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 94/257 (36%), Gaps = 16/257 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V++ ++ + I + + G N F V N GFD Sbjct: 1 MRKILTVALAGVLAATMLFAGCSKKEESKIPE--KIIVGTNAEFPPFEYVDDNKKVDGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + + ++ + I+ + K +++SK I++++ T R + F Sbjct: 59 IALMKEIAKRMDKK---IEIQNMEFKSLIGSMESKTINVVAAGMTKTEER--QNAVDFSD 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA-DYFKAHNMKYHPIVFERV 179 Y Q I++K I+ +SQL G I VQ GTT +L + D F + + +V Sbjct: 114 SYYTSNQAIIVNKDSKITKLSQLDGKKIGVQEGTTGDLISSGDKFGEPGKEKVVVKKAKV 173 Query: 180 E------EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + + DA D A + + + ++ D A+ +G Sbjct: 174 KRFKKGVDAVMDLKNGSVDAVVIDE--KPAQEFVKNNSKKLKLVIDSAGAEYYCLALPKG 231 Query: 234 DTEWYNIVSWTHYAMVT 250 + E+ ++ A+ Sbjct: 232 NEEFKKEINKQLKAIKE 248 >gi|124268063|ref|YP_001022067.1| putative amino acid binding protein [Methylibium petroleiphilum PM1] gi|124260838|gb|ABM95832.1| putative amino acid binding protein [Methylibium petroleiphilum PM1] Length = 263 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 87/258 (33%), Gaps = 30/258 (11%) Query: 1 MYKDFFVSILCLIILFFTSF----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + F S L L + + + + L+ + F+EV +G Sbjct: 1 MTR--FASFLALTAVLLFAAERGLAADG---------KKLRIAVEGAYPPFSEVTPSGQL 49 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 KGFD+D AL + + ++ + + ALQ+++ D + + T R+ + Sbjct: 50 KGFDIDIANALCAQM---KTECTLVQQDFDGMIPALQARKFDAIVASMSITPERQKVVA- 105 Query: 117 AFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y + + + L G I VQ T + FK + Sbjct: 106 -FTERYYQTPARLVAKSGSKLELTPEGLKGRKIGVQRSTIHDRFATATFK----GAEIVR 160 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAI 230 + + +E+ A R DA D A L + + + A+ Sbjct: 161 YTKQDEVFLDLAAGRIDATLQDSVAADVGFLKTPQGKGYGYIGPFYDDEKFFGVGAGIAL 220 Query: 231 IQGDTEWYNIVSWTHYAM 248 +GDTE + ++ + Sbjct: 221 RKGDTELQSKLNAAIKGI 238 >gi|295699405|ref|YP_003607298.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295438618|gb|ADG17787.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 271 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 79/240 (32%), Gaps = 11/240 (4%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + L + L + +A L DI K G ++ G+ F + + G+D+D Sbjct: 18 LAATLAITALGALPSAAHADALDDIAKSGTVRIGVFEDYPPFGSIGPDMKPVGYDIDVAN 77 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 + A+ +K++ +P+ R L + D+L T RE + F Sbjct: 78 LIGKAL---NAKVELVPVTGDNRMAFLADHKTDMLLS-VGQTPEREKV--IDFSQPYAPY 131 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 K + + + L G SI V GT +L++ + F+ +A Sbjct: 132 YLAVFGPKSLPVKNAADLGGKSISVARGTLEDLSVTKIAP---PSANIKRFDDPNGAISA 188 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + + + P+ + SP + + + V T Sbjct: 189 FLSGQVQLMVVGNDVGATILAR--HPANDPEQKFALFSSPDHVGLNKNEPRLKAKVDETI 246 >gi|73537420|ref|YP_297787.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72120757|gb|AAZ62943.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 266 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 77/241 (31%), Gaps = 14/241 (5%) Query: 13 IILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 +L FT+ + +A +L +K G LK G+ F G GFDV RA++ + Sbjct: 15 TVLGFTAPAVHAEDLLDTVKASGVLKVGMEGTYPPFGYRNGQGQLDGFDVAVARAVADKM 74 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 K+Q++ LQ+ + D++ T R+ L F + + Sbjct: 75 G---LKVQFITTEWSGIIAGLQAGKFDVIVNQVSMTPARK--QALDFTQPYVYSAVQVLQ 129 Query: 132 HKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 S+ L G S+ V G+ + E A Sbjct: 130 RSNDKREFGSLDALKGKSVGVTLGSNYAD-----LAKSVPGIQVQTYPGTSENLRDLAAG 184 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 R DA D L L + P L + +G+ ++ + A+ Sbjct: 185 RIDAALNDRLMLPYLIKNANLPLRTGALLAGTKLE-MGIPYRKGNPKFAKAIDDALIALQ 243 Query: 250 T 250 Sbjct: 244 Q 244 >gi|206578017|ref|YP_002239489.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Klebsiella pneumoniae 342] gi|288936337|ref|YP_003440396.1| cationic amino acid ABC transporter periplasmic binding protein [Klebsiella variicola At-22] gi|290510607|ref|ZP_06549977.1| arginine transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|206567075|gb|ACI08851.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Klebsiella pneumoniae 342] gi|288891046|gb|ADC59364.1| cationic amino acid ABC transporter, periplasmic binding protein [Klebsiella variicola At-22] gi|289777323|gb|EFD85321.1| arginine transport system substrate-binding protein [Klebsiella sp. 1_1_55] Length = 243 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 77/252 (30%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + + G++ F + AN GFD Sbjct: 1 MKKLVLAALLTTFTFGAAAAE-------------KISFGVSATYPPFESMDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + AL+ K+ D + D T R + F Sbjct: 48 LDLAKALCKQM---QAECTFTNHAFDSLIPALKFKKYDAVISGMDITPERSKQVA--FTD 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++ KK S L G I ++ GTT + L D + ++ + Sbjct: 103 PY-YANSALVIAKKDAFHSFDDLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P P + L A+ + Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGAATPKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNAALKAI 227 >gi|228913539|ref|ZP_04077168.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228932270|ref|ZP_04095154.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228827395|gb|EEM73145.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228846126|gb|EEM91148.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|324324899|gb|ADY20159.1| amino acid ABC transporter, amino acid-binding protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 265 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 35/254 (13%), Positives = 75/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + E + + R D D ++ T ++ + + Sbjct: 170 EIVGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G T+ V Sbjct: 229 KGSTKLVQEVDKAL 242 >gi|225859159|ref|YP_002740669.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae 70585] gi|225721945|gb|ACO17799.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus pneumoniae 70585] Length = 271 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 81/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV L F + + + S + IK++G L + F V Sbjct: 4 KKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ L ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEILSMSFDNVLTSLQTGKADLAVAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K ++ L A+I Q GT E + Sbjct: 120 -FDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKAQLPKA----Q 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + + A A+ + Sbjct: 175 LTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRK 234 Query: 233 GDTEWYNIVSWTHY 246 + +V Sbjct: 235 NSDDLKEVVDKVIQ 248 >gi|42780021|ref|NP_977268.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus ATCC 10987] gi|42735939|gb|AAS39876.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus ATCC 10987] Length = 265 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 35/254 (13%), Positives = 75/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + E + + R D D ++ T ++ + + Sbjct: 170 EIVGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G T+ V Sbjct: 229 KGSTKLVQEVDKAL 242 >gi|283833895|ref|ZP_06353636.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Citrobacter youngae ATCC 29220] gi|291070566|gb|EFE08675.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Citrobacter youngae ATCC 29220] Length = 248 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 82/249 (32%), Gaps = 20/249 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 53 LWAAVAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 R DA D + T + + D + A +G E V Sbjct: 164 AYMELGTSRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKGSDELREKV 222 Query: 242 SWTHYAMVT 250 + + Sbjct: 223 NGALKTLKE 231 >gi|330829213|ref|YP_004392165.1| histidine/lysine/arginine/ornithine ABC transporter periplasmic binding protein [Aeromonas veronii B565] gi|328804349|gb|AEB49548.1| ABC-type histidine/lysine/arginine/ornithine transporter, periplasmic binding protein [Aeromonas veronii B565] Length = 257 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 84/254 (33%), Gaps = 24/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + + + K+ ++ G+ F+ + +G+ KGFD Sbjct: 1 MNKLMLATAVVTALASGSLMA---------KEWKEVRIGVEGAYPPFSWTEPSGEVKGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + K + + AL S++ D + D T R+ + F Sbjct: 52 IDIANALCEEM---KVKCTLVKQDWDGIIPALLSRKFDAIIATMDITEERKK--KVDFTQ 106 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F K + + + G S+ VQ T+ + + D F + Sbjct: 107 KYQHIPARFAAKKGTDVQLDKAFMEGKSVAVQRATSMDTFITDNFP----NATIKRYGTA 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E ++ R D D +A+ L + + ++ A+ + D Sbjct: 163 DEAYLDLKSGRVDYVLADSAAITDGLLKKEGGDAFEFVGPKLTDPKWFGEGAGIAVRKAD 222 Query: 235 TEWYNIVSWTHYAM 248 + + A+ Sbjct: 223 KDLKEKFNAAILAL 236 >gi|296103259|ref|YP_003613405.1| glutamine ABC transporter periplasmic protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057718|gb|ADF62456.1| glutamine ABC transporter periplasmic protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 247 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 82/249 (32%), Gaps = 21/249 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSVLKVSLAALTLAFAVSSQAAD---------KLVVATDTAFVPFEFKQGD-KYVGFDVD 51 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 52 LWAAIAKELKLDY---TLKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 106 Query: 123 YFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 107 YKSGLLVMVKADNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 162 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + + A +G + V Sbjct: 163 AYMELGTNRADAVLHDTPNILYFIKTAGNGK-FKAVGESLEAQQYGIAFPKGSDDLRTKV 221 Query: 242 SWTHYAMVT 250 + + Sbjct: 222 NGALKTLKE 230 >gi|260550885|ref|ZP_05825091.1| lysine-arginine-ornithine-histidine-binding periplasmic protein [Acinetobacter sp. RUH2624] gi|260406012|gb|EEW99498.1| lysine-arginine-ornithine-histidine-binding periplasmic protein [Acinetobacter sp. RUH2624] Length = 261 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 82/256 (32%), Gaps = 22/256 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L L + + K ++ G + F +G GFD Sbjct: 5 MKKMFVSTTLVLAAVATNVQA---------KDWKVIRFGTESSYAPFEYKTPDGKLTGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + + +K ++ + AL++K+ D + + T R + F Sbjct: 56 VDLGNAICAKL---KAKCVWVENSFDGMIPALKAKKFDGILSSMTVTDERAK--QILFSS 110 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K + + + L G + VQ GT E Y+ + + + Sbjct: 111 KIYNTPTRMVAKKGSPLLPTPTSLKGKRVGVQQGTIQETYAKTYWAPKGVS--VVPYPTQ 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + R DA D + L + + A + + D Sbjct: 169 DLIYQDMMSGRLDATLQDAIMVDGAFLKQPKGKNFSFAGGNVVDVKTLGVGAAIGLRKED 228 Query: 235 TEWYNIVSWTHYAMVT 250 + + A++ Sbjct: 229 ADLKANIDKALAAIIA 244 >gi|260103307|ref|ZP_05753544.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] gi|260082888|gb|EEW67008.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] Length = 286 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 100/260 (38%), Gaps = 30/260 (11%) Query: 2 YKDF--FVSILCLIILFFTS----------------FSTNASILGDIKKRGFLKCGINTG 43 K F +S++ +++ ++ +N + + IK+RG+++ G+ Sbjct: 4 RKIFNTIISVIAAVVVLASAYMGLTKPYLARSAGGGGWSNNNSVTQIKRRGYIRIGVYGD 63 Query: 44 LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 L + V + G GFD+ R L+ + P ++ LN R AL S ++D++ N Sbjct: 64 LPPYGWVNSQGKRVGFDLRLARELAKELGVKP---RFTQLNGNNRVDALNSNKVDMVLAN 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R + F G + K I+S QL G + + G+T E Sbjct: 121 FTKTPERAEV--VDFAHPYMKVSTGVVSPKSHPITSEKQLRGKQLILLKGSTGENYF--- 175 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 A+ + F+ + A + R A D S LYA P V + I Sbjct: 176 --ANRPGIKLLRFDSETQQFNAMKNKRGAALADDNSYLYAWI--KKNPQYVVGIRSIGPH 231 Query: 224 SPLAPAIIQGDTEWYNIVSW 243 +APA+ +G+ + Sbjct: 232 QFIAPAVKKGNKSLLKWTNK 251 >gi|157363346|ref|YP_001470113.1| extracellular solute-binding protein [Thermotoga lettingae TMO] gi|157313950|gb|ABV33049.1| extracellular solute-binding protein family 3 [Thermotoga lettingae TMO] Length = 252 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 95/244 (38%), Gaps = 21/244 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F + I+ ++ AS++ DI+KRG L+ G + G + G+ G + Sbjct: 1 MRRFFVILIVTALLFTGL-----ASLIDDIQKRGVLRVGQDEGYMPLYGTDEKGERVGLE 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ ++ + ++Y+ +N AL S + DI+ T R +L + F Sbjct: 56 VELINKIAEILGVK---VEYVIVNWDGIIPALISGKFDIIFSGMTITPER--ALKVNFSA 110 Query: 121 ITYFDGQGFIMHK--KKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ + +K K + L+ I VQ GTT E T F + F Sbjct: 111 PYLTVGQAILYNKSVFKTPPTYQDLADKPVKIAVQLGTTGEFTARRKFPKA----EILTF 166 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++E + R D D + L + + +++S+ L AI +GD E Sbjct: 167 STMDEAAFQVVSKRADIMVNDSIYVKFLTQKYE---TLGMTNELLSREDLGIAIRKGDME 223 Query: 237 WYNI 240 Sbjct: 224 ALRW 227 >gi|322375496|ref|ZP_08050009.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C300] gi|321279759|gb|EFX56799.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C300] Length = 271 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 80/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K V L + + + + S + IK++G L + F V Sbjct: 4 KKWILVVCSMLASVVLVACQSGTDSSQSAVDAIKQKGKLVVATSPDYAPFEFQALVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAIAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K +S + A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKMSFLVRKADLDKYKDLSSFASANIAAQKGTVPETMVKEQLP----NAQ 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + I A AI + Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAGKNSDLVVASVNLTIKDGEANAVAIKK 234 Query: 233 GDTEWYNIVSWTHY 246 ++ +V Sbjct: 235 DQSDLKAVVDKVIQ 248 >gi|306838803|ref|ZP_07471634.1| extracellular solute-binding protein [Brucella sp. NF 2653] gi|306406087|gb|EFM62335.1| extracellular solute-binding protein [Brucella sp. NF 2653] Length = 262 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 77/252 (30%), Gaps = 20/252 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + F C +I+ F + ++ L G F + +G GFDVD Sbjct: 2 RGFKRIAACAVIVGFAAIGAA-----RAEEPLKLVIGTEGAYPPFNFINPDGSLSGFDVD 56 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 RAL + ++ ++ ALQ+ + D + T R+ + F Sbjct: 57 IARALCDEM---KAECTFITQEWDGTIPALQAGKFDAYVSSMSITEERKK--QVDFSDKY 111 Query: 123 YFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G K I + L+G +I VQ TT F + E Sbjct: 112 YNTPLGVAAPKDTDIKGVTKEDLAGKTIGVQVSTTHANYAEQVF----TDSTIKAYPTAE 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV----ILPDIISKSPLAPAIIQGDTE 236 E R DA D L T D + D I + A +G E Sbjct: 168 EYRLDLANGRLDAVNDDSVTLSEWLKTPDGACCKMVGTYPPDDAIHGVGVGVAFKKGRPE 227 Query: 237 WYNIVSWTHYAM 248 + A+ Sbjct: 228 LVEKFNAAIKAI 239 >gi|284048142|ref|YP_003398481.1| extracellular solute-binding protein family 3 [Acidaminococcus fermentans DSM 20731] gi|283952363|gb|ADB47166.1| extracellular solute-binding protein family 3 [Acidaminococcus fermentans DSM 20731] Length = 292 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 91/280 (32%), Gaps = 43/280 (15%) Query: 2 YKDFFVSILCLIILFFTSFSTN-------------ASILGDIKKRGFLKCGINTGLVGFA 48 K F V + L+ + + + A + IKKRG L+ G+ GF Sbjct: 8 RKIFAVGVTVLMAVSLFAGCGDEKKSADSGKSSNVAEDIAAIKKRGVLRVGVKNSTKGFG 67 Query: 49 EVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 G + G +VD AL+ + D ++Y P+ A R L S ID+++ T Sbjct: 68 YQDPATGKFTGLEVDLGEALAKKLGVD---VEYTPVTAATRTALLDSGDIDMVAATFTIT 124 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ F Y D G ++ K I+S++ L G + V +G+T+ L + Sbjct: 125 PERKK--SWDFTTPYYTDHVGVLVEKASNINSLADLKGKVVGVSSGSTSAKALVEAMIKA 182 Query: 168 N------------------MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + I A + A+ D S L Sbjct: 183 KVIDGEGFDPKNFDAATWTKGVSFKQYADYPAISTALTSGEVSAFCVDKSILAIYHT--- 239 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 + + + + A +G + + Sbjct: 240 --DDRTFIKEEFAPQDYGLATKKG-SGMSKYCEEAVQGWL 276 >gi|237730789|ref|ZP_04561270.1| glutamine ABC transporter periplasmic protein [Citrobacter sp. 30_2] gi|226906328|gb|EEH92246.1| glutamine ABC transporter periplasmic protein [Citrobacter sp. 30_2] Length = 248 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 83/249 (33%), Gaps = 20/249 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K ID+ T R+ + F Sbjct: 53 LWAAVAKELKLDYE---LKPMDFSGIIPALQTKNIDLALAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + + + A +G + V Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGESLEAQQYGIAFPKGSDDLREKV 222 Query: 242 SWTHYAMVT 250 + + Sbjct: 223 NGALKTLKE 231 >gi|77410988|ref|ZP_00787343.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae CJB111] gi|77162912|gb|EAO73868.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae CJB111] Length = 301 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 34/254 (13%), Positives = 76/254 (29%), Gaps = 14/254 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDI------KKRGFLKCGINTGLVGFAEVKANGD 55 I L ++ ++ + + I +K + G + V +GD Sbjct: 29 KNILLTIIFGLFMIILSACGMSNKEMAGIDNWEHYQKEKKITIGFDNTFVPMGFESRSGD 88 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D A+ +++ P+N + L + ID++ T R Sbjct: 89 YIGFDIDLANAVFKEYG---ISVKWQPINWDMKETELNNGNIDLIWNGYSKTAERAK--K 143 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 +AF + Q + I+S+ + G + Q+G++ D K Sbjct: 144 VAFTNPYMNNHQVIVTKTSSHINSIKDMKGKKLGAQSGSSGFDAFNAKPDILKKFVKGKE 203 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + ++ + + +R D D + + + Sbjct: 204 AVQYDTFTQALIDLKNNRIDGLLIDEVYANYYLKQEGNIKAYYFVKTAYQGENFVVGARK 263 Query: 233 GDTEWYNIVSWTHY 246 D ++ Sbjct: 264 VDRRLIEKINKAFK 277 >gi|228931859|ref|ZP_04094755.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228827839|gb|EEM73577.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 264 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 80/252 (31%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F K +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKKNDGKLVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + P+ I + L++K+ D++ + T R + F Sbjct: 61 FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + + ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKNLVT------KHTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|229194740|ref|ZP_04321531.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus m1293] gi|228588751|gb|EEK46778.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus m1293] Length = 264 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLAG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + P+ I + L++K+ D++ + T R + F Sbjct: 61 FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDVILGSMAITEER--LKAVNF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KHTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|283477969|emb|CAY73885.1| Histidine ABC transport system, periplasmic component [Erwinia pyrifoliae DSM 12163] Length = 261 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 89/250 (35%), Gaps = 21/250 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + L ++ S + A I++ ++ ++ F G+ GFD Sbjct: 1 MKRATVGKLAALALMAGCSLTAQA----KIEQ---VRFAVDASYPPFESKTPKGELVGFD 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + ++ AL++++ D + + T R + F Sbjct: 54 IDLGNALCAQM---QANCVWVESQFDGMIPALKARKFDAILSDMGITEER--LKQINFTV 108 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K G+ + L G S+ V+ GT E ++ H + + + Sbjct: 109 PLYDTHTQLIARKGSGLLPTADSLKGKSVGVEQGTVQERYALAKWQPHG--VNVVAYGDQ 166 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +++ + R D D + L + + + L I + P+ A + +GD Sbjct: 167 AQVENDLVSGRLDVVFTDAAQAAIGFLKHPQGQDF-ELAGPIVQDPIIGPGTAIGLRKGD 225 Query: 235 TEWYNIVSWT 244 E + Sbjct: 226 DELKTALDNA 235 >gi|194738205|ref|YP_002117295.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194713707|gb|ACF92928.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] Length = 246 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 88/260 (33%), Gaps = 28/260 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + + S S L G + + V A+ GFD Sbjct: 1 MKKKLIVMLLASLSVHAASVSAR-----------TLHFGTSATYAPYEFVDADNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + ++ + + L+ K+ D + D T RE ++F Sbjct: 50 IDVANAVCKEM---QAECSFTNQSFDSLIPGLRFKKFDAVIAGMDMTPKRE--QQVSFSQ 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ +K + + L G + ++ GTT + L D P+ ++ Sbjct: 105 PYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYL 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + +R + GD + A+ ++ I+ + S A+ +G+ Sbjct: 161 NAFTDLKNNRLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKGND 217 Query: 236 EWYNIVSWTHYAMVTAEELG 255 ++ + + E Sbjct: 218 ALLQEINAALDKVKASPEYA 237 >gi|301646298|ref|ZP_07246189.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 146-1] gi|331641381|ref|ZP_08342516.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli H736] gi|301075501|gb|EFK90307.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 146-1] gi|331038179|gb|EGI10399.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli H736] Length = 260 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 18 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S ++F Sbjct: 65 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 120 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P V + L A+ + Sbjct: 175 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 232 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 233 LLEKLNNALAAI 244 >gi|294636988|ref|ZP_06715310.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Edwardsiella tarda ATCC 23685] gi|291089816|gb|EFE22377.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Edwardsiella tarda ATCC 23685] Length = 243 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 87/248 (35%), Gaps = 25/248 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L I + ++ ++ F + A +GFD Sbjct: 1 MKKIIIAAMLAGISVSASANE-------------TIRFAAEASYPPFEFMDAQNKMQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + I + + + +L+ K+ID + D T R+ + F Sbjct: 48 IDLANAICTQI---KATCTFSNQSFDSLIPSLKFKRIDAVISGMDITPERQK--QVDFSQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K ++ V+ L G + +Q GTT + L D P+ ++ + Sbjct: 103 PYYDNSALFIAEKG-KVADVAALKGKRVGIQNGTTHQKYLMDKHPE----LTPVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N P + S L A+ +G+++ Sbjct: 158 NAILDLKNGRIDAVFGDTAVVNEWLKQNPNLAPVGSKVTDADYFGSGLGIAVRKGNSKLL 217 Query: 239 NIVSWTHY 246 + Sbjct: 218 EQFNQALN 225 >gi|288871529|ref|ZP_06117940.2| CjaA protein [Clostridium hathewayi DSM 13479] gi|288863100|gb|EFC95398.1| CjaA protein [Clostridium hathewayi DSM 13479] Length = 300 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 54/275 (19%), Positives = 99/275 (36%), Gaps = 35/275 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS---------------------ILGDIKKRGFLKCG 39 M K + + L + S + S L +IK+ G + G Sbjct: 8 MKKIRKLVTVTLTLSLAFSLAACGSENSSNNNVTANSRKTQNVVYRTLDEIKESGTINIG 67 Query: 40 INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 + + F V NG+++G+DV F + + I Y+ A R LQ+ + DI Sbjct: 68 VFSDKNPFGYVDENGEYQGYDVYFANRIGEDLGVK---INYISTEAANRIEYLQTGKADI 124 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTEL 158 + N T R + F G + + I S+ + + I V +GTT E Sbjct: 125 ILANFTVTPQRAE--EVDFALPYMNVALGVVSPDSRVIESLDNWNAEDPIIVISGTTAET 182 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 L + + ++ A A+ D + + A V +P Sbjct: 183 YLIE----NYPDIPLQKYDSYATAKNALENGNGAAWANDNTEVIAFA--LQNAGYTVGIP 236 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + S+ +APA+ +G++ + ++ A+ EE Sbjct: 237 SLGSQDSIAPAVSKGNSTLLDWLNEEIKAL--GEE 269 >gi|295399081|ref|ZP_06809063.1| extracellular solute-binding protein family 3 [Geobacillus thermoglucosidasius C56-YS93] gi|312110315|ref|YP_003988631.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y4.1MC1] gi|294978547|gb|EFG54143.1| extracellular solute-binding protein family 3 [Geobacillus thermoglucosidasius C56-YS93] gi|311215416|gb|ADP74020.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y4.1MC1] Length = 260 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 91/244 (37%), Gaps = 10/244 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAI 71 L + + G ++ LK G + F + + GFDVD + ++ + Sbjct: 16 GLLSACGAGSEEKNGSGAQKKVLKMGTSADYAPFEYIDTAKGNEIIGFDVDLAKMITKEL 75 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 + + + ++ ALQS ++D + T R+ + F + Y + Sbjct: 76 GYE---FEIVDMDFNGLIPALQSGKVDFVLAGMTPTKDRKK--NVDFSDVYYVSRNMIVS 130 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 K GI +V L G ++ VQ G+ E K +MK R+ E+ +A R Sbjct: 131 KKGSGIKTVKDLKGKTVGVQTGSIQEEEAKKIAKTVDMKLE--SRNRIPELIQEIQAGRF 188 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 DA + + T++ E +P ++ A A +G ++ + + + Sbjct: 189 DAAIIEDTVAKGYLQTSNGKLEGHTIPTNEQEAGSAIAFPKG-SKLRDEFNKVLREKIEN 247 Query: 252 EELG 255 E+ Sbjct: 248 GEVD 251 >gi|126739646|ref|ZP_01755338.1| putative ABC transporter periplasmic amino acid-binding protein [Roseobacter sp. SK209-2-6] gi|126719292|gb|EBA16002.1| putative ABC transporter periplasmic amino acid-binding protein [Roseobacter sp. SK209-2-6] Length = 267 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 83/218 (38%), Gaps = 7/218 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L I ++ + A L ++ RG L+CG+ AN + GFD Sbjct: 1 MLKKL--AALGLAIGLSSTGAAVADTLDNVVDRGTLRCGVVLDFPPIGYRDANNEPAGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V++C L++A+ D + + ER + + + D++ T +L R ++G F Sbjct: 59 VEYCADLAAALEVDYEILP---VTWAERLPVIVTGRADVVFGGTSDSLARARTVG--FTI 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +++ + GI S + G + GT E ++ ++ Sbjct: 114 PYAIYYAQGVVNAESGIKSFDDVRGKRVAGAVGTVPEQEWLKIAGEWGEEHLYQGYQSEN 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 E+ A + D +A+ + D +P Sbjct: 174 EVFLAVAQGKADIGLTTNTAVKPVTGQYDNVEAGPRMP 211 >gi|91788991|ref|YP_549943.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91698216|gb|ABE45045.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 266 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 75/251 (29%), Gaps = 19/251 (7%) Query: 1 MY----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + S + + + + A +L +K+RG LK + F N Sbjct: 1 MKNMNIRKALASTILVALALGAGIAHAADLLDTVKQRGTLKVALEGTYPPFNYK-ENDKL 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GF+V+ AL+ + + LQ+ + D++ T R+ + Sbjct: 60 AGFEVELANALAQKLGVKAE---FTTSEWSAILAGLQAGKYDVVINQVGITDKRKET--F 114 Query: 117 AFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F I+ K + +++ L G + + GT AD K Sbjct: 115 DFSEPYTISSPQLIIRKDEKRVFKTLADLKGKKLGLGQGT----NFADMAKKVG-DIDIK 169 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + +E R DA D + + P + ++ + Sbjct: 170 TYPGAQEYLQDLALGRIDAALNDSLLIPYIVKQTKLP--LKPGAPVGELEKSGIPFVKNN 227 Query: 235 TEWYNIVSWTH 245 ++ + Sbjct: 228 PKFKAAIDKAL 238 >gi|229816604|ref|ZP_04446902.1| hypothetical protein COLINT_03661 [Collinsella intestinalis DSM 13280] gi|229807810|gb|EEP43614.1| hypothetical protein COLINT_03661 [Collinsella intestinalis DSM 13280] Length = 318 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 90/252 (35%), Gaps = 21/252 (8%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFD- 73 S S L IK RG L G+ + G+ + G ++D C +++A+FD Sbjct: 66 GSAPASAPGSKLAAIKARGKLNAGVKKDVPGYGYYDPAARTYAGMEIDLCYQIAAAVFDV 125 Query: 74 ------DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + + + K R + + Q+D++ T R F D Sbjct: 126 TYDEARERELVSFTDVTPKTRGPLIDNDQLDVVCATYTITPER--IESWDFSTPYRTDYV 183 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP--IVFERVEEIDAA 185 G ++ K+ G + ++ L G I V G TT+ + K + P + F I ++ Sbjct: 184 GLMVKKRSGFTRIADLDGRIIGVSQGATTQGLIEQMLKDEGIDARPEFLAFSGYPIIKSS 243 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A D + D S L + ++ P++ + ++ +V Sbjct: 244 LDAGNIDCFAMDRSTLAGY----TNETVELLEPEVKFGEQNYGVATKKGSDLSTVVDECV 299 Query: 246 YA-----MVTAE 252 A + AE Sbjct: 300 RACAASGWLDAE 311 >gi|209516321|ref|ZP_03265178.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209503257|gb|EEA03256.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 269 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 80/239 (33%), Gaps = 11/239 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 +++ L L + +A L DI K G ++ G+ F + + G+D+D Sbjct: 17 LAMTALSALCALPSAAHADALDDIAKSGTVRIGVFEDYPPFGSIGPDMKPVGYDIDVANL 76 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + A+ +K++ +P+ R L + D+L E + + F Sbjct: 77 IGKAL---NAKVELVPVTGDNRMAFLADHKADLL---LSVGQTPERAKVIDFSQPYAPYY 130 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 K + S + L+G SI V GT +L++ + F+ +A+ Sbjct: 131 LAVFGPKSLPVKSAADLAGKSISVARGTLEDLSVTKIAP---PSANIKRFDDPNGAISAF 187 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + + P+ + SP + + + V T Sbjct: 188 ISGQVQLMVVGNDVGATILAR--HPANDPEQKFALFSSPDHVGLNKNEPRLKAKVDETI 244 >gi|204927139|ref|ZP_03218341.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204323804|gb|EDZ08999.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 246 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 88/260 (33%), Gaps = 28/260 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + + S S L G + + V A+ GFD Sbjct: 1 MKKKLIVMLLASLSVHAASVSAR-----------TLHFGTSATYAPYEFVDADNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + ++ + + L+ K+ D + D T RE ++F Sbjct: 50 IDVANAVCKEM---QAECSFTNQSFDSLIPGLRFKKFDAVIAGMDMTPKRE--QQVSFSQ 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ +K + + L G + ++ GTT + L D P+ ++ Sbjct: 105 PYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYL 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + +R + GD + A+ ++ I+ + + A+ +G+ Sbjct: 161 NAFTDLKNNRLEGVFGD---VAAIGKWLKNNPDYAIMDERANDPDYYGKGLGIAVRKGND 217 Query: 236 EWYNIVSWTHYAMVTAEELG 255 ++ + + E Sbjct: 218 ALLQEINAALDKVKASPEYA 237 >gi|146311037|ref|YP_001176111.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter sp. 638] gi|145317913|gb|ABP60060.1| L-arginine-binding protein [Enterobacter sp. 638] Length = 243 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 86/247 (34%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L I L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALLASISLSATAAQ-------------TIRFATEASYPPFESIDANNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + + +L+ K+ID + D T RE + F Sbjct: 48 VDLANALCKEI---DATCTFANQSFDSLIPSLKFKRIDAVMAGMDITPEREK--QVLFST 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K +S+ L G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFIGQKG-KFASIDLLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + ND+ P + + L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANDKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217 Query: 239 NIVSWTH 245 + Sbjct: 218 QKFNAAL 224 >gi|322615516|gb|EFY12436.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618576|gb|EFY15465.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622011|gb|EFY18861.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627083|gb|EFY23875.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631042|gb|EFY27806.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637739|gb|EFY34440.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642403|gb|EFY39007.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645664|gb|EFY42189.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650496|gb|EFY46904.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322659725|gb|EFY55968.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662064|gb|EFY58280.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666187|gb|EFY62365.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672607|gb|EFY68718.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676037|gb|EFY72108.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680521|gb|EFY76559.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684585|gb|EFY80589.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192900|gb|EFZ78126.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197224|gb|EFZ82364.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201659|gb|EFZ86723.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206173|gb|EFZ91135.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323215555|gb|EGA00299.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219540|gb|EGA04025.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227843|gb|EGA11997.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229013|gb|EGA13142.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236375|gb|EGA20451.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237505|gb|EGA21566.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241829|gb|EGA25858.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248022|gb|EGA31959.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254647|gb|EGA38458.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258294|gb|EGA41971.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259571|gb|EGA43205.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265844|gb|EGA49340.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270288|gb|EGA53736.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 246 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 86/257 (33%), Gaps = 22/257 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + + S S L G + + V A+ GFD Sbjct: 1 MKKKLIVMLLASLSVHAASVSAR-----------TLHFGTSATYAPYEFVDADNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + ++ + + L+ K+ D + D T RE ++F Sbjct: 50 IDVANAVCKEM---QAECSFTNQSFDSLIPGLRFKKFDAVIAGMDMTPKRE--QQVSFSQ 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ +K + + L G + ++ GTT + L D P+ ++ Sbjct: 105 PYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYL 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRP--SEHVILPDIISKSPLAPAIIQGDTEWY 238 + +R + GD++A+ N + L A+ +G+ Sbjct: 161 NAFTDLKNNRLEGVFGDVAAIGKWLKNNPNYAIMDERASDPDYYGKGLGIAVRKGNDALL 220 Query: 239 NIVSWTHYAMVTAEELG 255 ++ + + E Sbjct: 221 QEINAALDKVKASPEYA 237 >gi|259908071|ref|YP_002648427.1| ABC lysine/arginine/ornithine transporter, periplasmic ligand binding protein [Erwinia pyrifoliae Ep1/96] gi|224963693|emb|CAX55190.1| ABC lysine/arginine/ornithine transporter, periplasmic ligand binding protein [Erwinia pyrifoliae Ep1/96] Length = 264 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 89/250 (35%), Gaps = 21/250 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + L ++ S + A I++ ++ ++ F G+ GFD Sbjct: 4 MKRATVGKLAALALMAGCSLTAQA----KIEQ---VRFAVDASYPPFESKTPKGELVGFD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + ++ AL++++ D + + T R + F Sbjct: 57 IDLGNALCAQM---QANCVWVESQFDGMIPALKARKFDAILSDMGITEER--LKQINFTV 111 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K G+ + L G S+ V+ GT E ++ H + + + Sbjct: 112 PLYDTHTQLIARKGSGLLPTADSLKGKSVGVEQGTVQERYALAKWQPHG--VNVVAYGDQ 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +++ + R D D + L + + + L I + P+ A + +GD Sbjct: 170 AQVENDLVSGRLDVVFTDAAQAAIGFLKHPQGQDF-ELAGPIVQDPIIGPGTAIGLRKGD 228 Query: 235 TEWYNIVSWT 244 E + Sbjct: 229 DELKTALDNA 238 >gi|325122858|gb|ADY82381.1| ABC lysine-arginine-ornithine transporter, periplasmic ligand binding protein [Acinetobacter calcoaceticus PHEA-2] Length = 261 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 83/256 (32%), Gaps = 22/256 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L L + + K ++ G + F +G GFD Sbjct: 5 MKKMFVSTTLVLAAVATNVQA---------KDWKVIRFGTESSYAPFEYKTPDGKLTGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + + +K ++ + AL++K+ D + + T R + F Sbjct: 56 VDLGNAICAKL---KAKCVWVENSFDGMIPALKAKKFDGILSSMTVTDERAKQIA--FSS 110 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K + + + L G + VQ GT E Y+ + + Sbjct: 111 KIYNTPTRMVAKKGSPLLPTAASLKGKRVGVQQGTIQETYAKTYWAPKG--VTVVPYPVQ 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + R DA D + L + + + A + + D Sbjct: 169 DLIYQDMMSGRLDATLQDAIMVDGAFLKQPKGKNFSFAGGNVVDAKTLGVGAAIGLRKED 228 Query: 235 TEWYNIVSWTHYAMVT 250 + ++ A++ Sbjct: 229 ADLKANINKALAAIIA 244 >gi|330010081|ref|ZP_08306680.1| glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Klebsiella sp. MS 92-3] gi|328534632|gb|EGF61206.1| glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Klebsiella sp. MS 92-3] Length = 248 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 81/247 (32%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F VS+ L + F S L +T V F + + + GFD Sbjct: 1 MKSVFKVSLAALTLAFAVSSYAANKT---------LVVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + D P++ ALQ+K ID+ T R+ + F Sbjct: 51 VDLWAAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITDERKK--AIDFSD 105 Query: 121 ITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G + I V L+G + V++GT + DY KA+ F + Sbjct: 106 GYYKSGLLVMVNANNNDIKDVKDLNGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + T + + + A +G E Sbjct: 162 DNAYMELGTGRADAVLHDTPNILYFIKTAGNGK-FKAVGESLEAQNYGIAFPKGSDELRE 220 Query: 240 IVSWTHY 246 V+ Sbjct: 221 KVNGALK 227 >gi|157146550|ref|YP_001453869.1| glutamine ABC transporter periplasmic protein [Citrobacter koseri ATCC BAA-895] gi|157083755|gb|ABV13433.1| hypothetical protein CKO_02311 [Citrobacter koseri ATCC BAA-895] Length = 248 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 82/245 (33%), Gaps = 20/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 53 LWAAVAKELNLDY---TLKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + + + A +G E V Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGESLEAQQYGIAFPKGSDELREKV 222 Query: 242 SWTHY 246 + Sbjct: 223 NGALK 227 >gi|306831678|ref|ZP_07464835.1| polar amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978617|ref|YP_004288333.1| putative amino acid transporter, amino acid-binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|304426103|gb|EFM29218.1| polar amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178545|emb|CBZ48589.1| putative amino acid transporter, amino acid-binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 281 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 81/266 (30%), Gaps = 20/266 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG------DIKKRGFLKCGINTGLVGFAE---VK 51 M L + S S DIK +G L +N F V Sbjct: 3 MKVSKLFGGLAVAAASLFLLSACGSSSSEDTSVSDIKDKGTLVVALNPEFAPFEFKTLVD 62 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G DV+ +A++ + D +++ ++ +LQS + DI T R+ Sbjct: 63 GKDTIVGADVEIAKAIAEELGVD---VKFSSMSFNNVLASLQSGKADIAISGISATEERK 119 Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y ++ K + L G S+ Q G+ E ++ Sbjct: 120 K--AYDFSDPYYEAENVVLIRKTDIDKYTDTDSLDGLSVGTQKGSIQETVASEQL----T 173 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + E+ + + +A + N + I A A Sbjct: 174 GAKVVSLTQNSEMINELKNSQIEAVVLEKPIAEGYVANNSDLTISDITLTSDDADAYAVA 233 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255 + +G T+ V+ + + ++ Sbjct: 234 LPKGSTKLTKKVNKVIKELKESGKID 259 >gi|295115214|emb|CBL36061.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SM4/1] Length = 308 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 46/287 (16%), Positives = 84/287 (29%), Gaps = 47/287 (16%) Query: 1 MYKDFFVSILCLIILF-FTSFSTNASILG------------------------------- 28 M K F + ++F T+ STNA Sbjct: 1 MKKKVFSVMTAAALVFSLTACSTNAKTEEPETAAQSSASQTEAAGAETAESSGGASAEAG 60 Query: 29 ------DIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + K G G + V +G++ GFD++ ++ + Sbjct: 61 EKAASGETKAAGDTFTVGFDQDFPPMGFVGDDGEYTGFDLELAAEVADRLG---LTFVPQ 117 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ + + L+S ID + T + + + Q ++ + GI S + Sbjct: 118 PIAWDAKNMELESGNIDCIWNGFTMTGREDE---YTWSEPYMENSQVVVVLEDSGIESTA 174 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + VQA ++ E L + + DA D + Sbjct: 175 DLAGKIVEVQADSSAEAALKEMPELTESFAALQTTPDYNTAFMDLEMGSVDAIAMD--VI 232 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 A R IL D ++ A +G+ + V M Sbjct: 233 VAGYQLQQRDGGFKILDDTLASEEYAIGFKKGNEALRDQVQTVLDEM 279 >gi|237807673|ref|YP_002892113.1| extracellular solute-binding protein family 3 [Tolumonas auensis DSM 9187] gi|237499934|gb|ACQ92527.1| extracellular solute-binding protein family 3 [Tolumonas auensis DSM 9187] Length = 255 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 82/250 (32%), Gaps = 24/250 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +I+ +++ K+ ++ I F+ V G GFD Sbjct: 1 MKKLWLTAIVASLMVTGA----------QAKQWKEVRVAIEGAYPPFSSVDEKGQLHGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + K + + L +++ D + D T R+ + F Sbjct: 51 VDITNALCEQM---KVKCTIVKQDWDGMIPGLLARKFDAIISTMDITEERKK--RIDFSG 105 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F K I + + + I VQ T+ + ++D F + Sbjct: 106 KYQHVPAHFAAKKGATIELTQAFMKDKKIAVQRATSMDTYVSDNFP----DTEIKRYGSY 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK----SPLAPAIIQGDT 235 +E ++ R D D +++ + ++ P + K A+ +GD Sbjct: 162 DEAYLDLKSGRVDYVLADTASVMDGLVNKSNGEYSLVGPGLSDKKWFGEGAGVALRKGDG 221 Query: 236 EWYNIVSWTH 245 + + + Sbjct: 222 DLKAMFNKAI 231 >gi|209518797|ref|ZP_03267611.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209500767|gb|EEA00809.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 259 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 67/254 (26%), Gaps = 14/254 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ L+ S + A IK G K G F +G GFD Sbjct: 1 MKSIRTILLVALLQAVAVSPAFAADEFAQIKSSGVFKVGTEGTYAPFTYHDESGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ ++ I P ++ L + D + T R+ F Sbjct: 61 VEIATEIAKRIGVKPE---FVEGKWDGLIAGLDVNRYDAVINEVSVTDARKA--KYDFST 115 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ I + L G + D I + Sbjct: 116 PYITSHAALIVRADNTTIKTFDDLKGKKSANTLTSNFGKIAKD------HGAEVIAVQGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTEWY 238 E + R DA D + K + + A + +G+ + Sbjct: 170 NESIDLLTSGRVDATVNDSLSFLDFKKHKPDAQVRIAAIDNSAGSDKSAVLVRKGNPQLV 229 Query: 239 NIVSWTHYAMVTAE 252 + A + A+ Sbjct: 230 AAIDKAL-ADIKAD 242 >gi|167749252|ref|ZP_02421379.1| hypothetical protein EUBSIR_00203 [Eubacterium siraeum DSM 15702] gi|167657781|gb|EDS01911.1| hypothetical protein EUBSIR_00203 [Eubacterium siraeum DSM 15702] Length = 310 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 74/225 (32%), Gaps = 9/225 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + L +K G G++ NG+ GFD+D + + + K Sbjct: 70 AEGDNSLQKVKDAGQFILGLDATFKPMGYTDENGEIVGFDIDVAEEVCNRLGVKLVK--- 126 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P+N L + D + R+ + L + F++ ++ + Sbjct: 127 QPINWDTLTTDLNVGKCDCVWNGLSINEERQEKMNL--SEPYMKNAMVFVVKGDSTVAKM 184 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G I VQ G++ + L + ++ PI E DA D Sbjct: 185 DDLKGKKISVQNGSSAQTILENSAIKDDITISPIA--TNVEALQQLELGVVDAVFLDE-- 240 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + A + ++ L + + + A A + D + V T Sbjct: 241 VVADYEIKNSGKDYKKLAEGLEEEQYAIAFRKNDQALRDAVQKTL 285 >gi|126730632|ref|ZP_01746442.1| probable amino acid ABC transporter, substrate-binding protein [Sagittula stellata E-37] gi|126708798|gb|EBA07854.1| probable amino acid ABC transporter, substrate-binding protein [Sagittula stellata E-37] Length = 262 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 81/220 (36%), Gaps = 9/220 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L +I++RG ++ G+ + F +G G+DV+ + ++ + ++ Sbjct: 24 QAGTLDEIRERGTIRVGVPSDSPPFGMKAPDGGLVGYDVEMAQLIADDLG---VALEITN 80 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 R L S ++DI+ + R+ + F G ++ Sbjct: 81 AVGSNRVPLLTSGRVDIVISSFGKNEERDKV--IDFSDQYAPFYNGVFGPADIEVNGPED 138 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G S+ V GT +L L+ FE +AY A D + Sbjct: 139 LKGYSVGVTTGTIEDLELS---AKTGDDVTITRFESGASGFSAYFAGAVDFFATGN-VTA 194 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + N ++ +I+ SP + +GDT+ + ++ Sbjct: 195 AALMENPNLPREIVPKFLINSSPCYIGVREGDTQMLDYLN 234 >gi|172062771|ref|YP_001810422.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia ambifaria MC40-6] gi|171995288|gb|ACB66206.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia ambifaria MC40-6] Length = 260 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 19/254 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ + + +L ++ A K L+ G + F +G GFD Sbjct: 1 MKR--LIAAVSIALLAVSAGPAVA------KDWTTLRFGTDASYAPFESKAPDGKLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + +K +L + AL++K+ D + + T R +G Sbjct: 53 IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITPQRAEQIGFT-TK 108 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I + + + + L G SI V+ GTT E Y+ + + ++ + Sbjct: 109 IYNQPTRLVVKKGSSLLPTAESLKGKSIGVEQGTTQEAYAKAYWAKQG--ANVVSYQNQD 166 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + A + R DA D L + R + + + + + + + DT Sbjct: 167 GVYADLTSGRLDAALQDEVQAAIGFLKSPRGAGYQFVGPELIDEKVLGIGAGIGLRKEDT 226 Query: 236 EWYNIVSWTHYAMV 249 + + MV Sbjct: 227 DLKAKIDRAILDMV 240 >gi|270292828|ref|ZP_06199039.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M143] gi|270278807|gb|EFA24653.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. M143] Length = 278 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 81/251 (32%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K V + + LF + T+ + + G ++ V + +G Sbjct: 1 MKKLMLVLVSLMAALFLVACGKNSSETSGDNWSKYESNKSITIGFDSTFVPMGFAQKDGS 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D A+ + + P++ + L ID++ T R Sbjct: 61 YAGFDIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REK 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 +AF + Q + K GI++ ++G ++ QAG++ K Sbjct: 116 VAFSNSYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEGNPAILKDIVANNE 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++ E + R D D +++ + + A + Sbjct: 176 ANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGILNDYNVFTVGLETEAFAVGARK 235 Query: 233 GDTEWYNIVSW 243 DT N ++ Sbjct: 236 EDTTLVNKINE 246 >gi|229068108|ref|ZP_04201415.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus F65185] gi|229077712|ref|ZP_04210342.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus Rock4-2] gi|229176945|ref|ZP_04304340.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus 172560W] gi|229188624|ref|ZP_04315663.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus ATCC 10876] gi|228594813|gb|EEK52593.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus ATCC 10876] gi|228606420|gb|EEK63846.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus 172560W] gi|228705653|gb|EEL58009.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus Rock4-2] gi|228714922|gb|EEL66790.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus F65185] Length = 264 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 85/253 (33%), Gaps = 18/253 (7%) Query: 1 MYKDFFVSILCLII---LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + + + + + S +S ++ + ++ F + +G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESSTTSTNGEK-EFRYAMSGLYKPFNYKENDGKLV 59 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDV+ AL+ + + + + LQ+K+ D++ + T R ++ Sbjct: 60 GFDVEIGEALAKKMNMKATPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVS 114 Query: 118 FRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y G F+ K ISS L G I V +T + +A + Sbjct: 115 FSNPYYRSGAQIFVAKKNNAISSPEDLKGKKIGVVKASTFKNLVA------KYTDQITEY 168 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + R DA D + L++ + S ++ + AI + D E Sbjct: 169 DSDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKE 226 Query: 237 WYNIVSWTHYAMV 249 V+ ++ Sbjct: 227 MVEKVNKALDEII 239 >gi|56414020|ref|YP_151095.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362943|ref|YP_002142580.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56128277|gb|AAV77783.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094420|emb|CAR59936.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 243 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 83/247 (33%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + F Sbjct: 48 VDLANALCKEI---DASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLVPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217 Query: 239 NIVSWTH 245 + Sbjct: 218 QKFNTAL 224 >gi|271967566|ref|YP_003341762.1| extracellular solute-binding protein [Streptosporangium roseum DSM 43021] gi|270510741|gb|ACZ89019.1| extracellular solute-binding protein [Streptosporangium roseum DSM 43021] Length = 305 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 93/273 (34%), Gaps = 40/273 (14%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS----------------------------ILGDIKK 32 M + V+ + ++ L + + +AS + IK+ Sbjct: 4 MKRMAAVAAVSMVGLSACAGTDSASPAVPGEAKGGDLFAKAPVAAAADILPGSTMEKIKQ 63 Query: 33 RGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 RG L G + ++ G+ +GFD D +AL+ I +P K++ + ++ R Sbjct: 64 RGELIVGGSLDAPLLSQQNPTTGEVEGFDADMGKALAKYIIGEP-KVKIVNSASETREAL 122 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150 L + +D++ + T R + F Y G + K I+ L+G ++ Sbjct: 123 LSNGTVDVVFQTYTITPERAKQVA--FAGPYYSSGLSLAVRKGTAGIAKPEDLNGKTVIA 180 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 A T + + F E A + R D Y D L A + Sbjct: 181 GANTPAIPAIKKLAPQAK----IVTFGSDPECMQALKQERGDVYVQDEMLLVANAQKDP- 235 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 ++ + P + GD ++ V+ Sbjct: 236 --SVQVVGQPFTTDPYGIGLKHGDEQFKKFVND 266 >gi|222081926|ref|YP_002541291.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726605|gb|ACM29694.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 270 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 37/248 (14%), Positives = 83/248 (33%), Gaps = 16/248 (6%) Query: 1 MYKDFFVS-----ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M + F++ + IL + A L IK R L ++ G F A Sbjct: 4 MKRRSFLAGISGALAGATILGVNARQALADTLETIKTRKKLLIAVDLGSPPFGMSDAAMQ 63 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G DV+ + L++ + ++ +P+ + R L + + DI+ + R+ Sbjct: 64 PTGSDVETAKLLAADLGY---PLEIVPVTSPNRVPFLLTSKADIVMASFSVNEERKKV-- 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F K I ++ + G + G+T + + Sbjct: 119 IDFTDAYGVIQIVVAAPKSANIKTLQDVVGQRLGTTRGSTNDKVATTEA----QGAEMVR 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + A + + + + A+ V L ++ +P A + +GD Sbjct: 175 YDDDATLITALVSGQVNIMASSPQIMAAVNQRRTSDPLEVKL--VLKTNPYAIGLRKGDD 232 Query: 236 EWYNIVSW 243 + ++ Sbjct: 233 ALKSTLNE 240 >gi|317123707|ref|YP_004097819.1| amino acid ABC transporter substrate-binding protein, PAAT family [Intrasporangium calvum DSM 43043] gi|315587795|gb|ADU47092.1| amino acid ABC transporter substrate-binding protein, PAAT family [Intrasporangium calvum DSM 43043] Length = 334 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 52/235 (22%), Positives = 88/235 (37%), Gaps = 14/235 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDD 74 S S + I +RG L G++ F +GFD+D RA++ ++ Sbjct: 72 LPASSSITDGSVRAILERGHLTVGVSADTYLFGARDPFTNRIEGFDIDIARAVAQSLLGS 131 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 SK+++ + A +R L+ +++D+++RN T R +AF Y GQ ++ K Sbjct: 132 ASKVRFRVITAADRIEVLEKREVDMVARNMTMTCAR--WEQIAFSSEYYHSGQKLLVAKD 189 Query: 135 K----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 +++ L G +C GT+T L + ++ R Sbjct: 190 PSGAVPDTTIEDLKGKRVCAPRGTSTLEKLRSV-----KGVEAVPAADHTGCLVLFQQGR 244 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 DA TGD + L L P V I+ P Q D V+ Sbjct: 245 ADAITGDDTVLAGLAAQ--DPYTVVSSAPAITDEPYGLGFNQADVYLVRYVNRVL 297 >gi|294629391|ref|ZP_06707951.1| amino acid ABC transporter, amino acid-binding protein [Streptomyces sp. e14] gi|292832724|gb|EFF91073.1| amino acid ABC transporter, amino acid-binding protein [Streptomyces sp. e14] Length = 350 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 84/237 (35%), Gaps = 12/237 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN---GDWKGFDVDFCRALSSAIF 72 + + + I++RG+L G++ + N G +GFD+D ++ I Sbjct: 83 SLAPSAADGPTVAAIRQRGYLSVGVDQNSYRWGYRNPNNASGALEGFDIDLAHRIAEDIL 142 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 D K+Q+ + ER A++S ++D++ R T + +AF + GQ + Sbjct: 143 GDGDKVQFRAIPTNERVNAIRSGRVDMVVRTMTITC--DRLDQVAFSAPYFLTGQQVLAP 200 Query: 133 KKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHP---IVFERVEEIDAAYRA 188 + I+ L+G +C G+T L+ K + + + Sbjct: 201 RTSAITGYDKSLAGKRVCSATGSTAYDHLSADRKNGTLPASTDIGTTVPNQLDCLVRLQL 260 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 DA D + + + + +K A+ G + V+ Sbjct: 261 GEVDAVVTDGALAASQAAQDP---TVQLKGGTFTKEYYGVAMKLGADDLVRQVNRIL 314 >gi|288962583|ref|YP_003452878.1| polar amino acid transport system substrate-binding protein [Azospirillum sp. B510] gi|288914849|dbj|BAI76334.1| polar amino acid transport system substrate-binding protein [Azospirillum sp. B510] Length = 267 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 36/241 (14%), Positives = 78/241 (32%), Gaps = 10/241 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 ++L A L I K L+ + F V + G+D+D Sbjct: 12 LATAVLAGGFTATAPTHAKADALERIAKEKVLRVAVPQDFPPFGSVGTDLKPVGYDIDAA 71 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ + +K++ +P+ + R L + ++D++ + RE + F Sbjct: 72 TLIAKEMG---AKVELVPVTSTNRIPYLTTGKVDLVISSLGKNAEREKV--IDFSTAYAP 126 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 G + L+G ++ V G+ ++ L+ K +E + Sbjct: 127 FYNGVFGPDDIAVEKAEDLNGKTVGVTRGSVEDIELSKIVS---DKVTVRRYEDNNGTIS 183 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A+ + + A+ P IL +I SP + + + V+ Sbjct: 184 AFLSGQVQLVATGNVVAAAIFDR--NPPRQPILKFLIKNSPCFVGLNKNEGPLLEKVNAI 241 Query: 245 H 245 Sbjct: 242 I 242 >gi|229152356|ref|ZP_04280548.1| Arginine-binding extracellular protein artP [Bacillus cereus m1550] gi|228630964|gb|EEK87601.1| Arginine-binding extracellular protein artP [Bacillus cereus m1550] Length = 259 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 88/254 (34%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N + L G + + V A+ + G Sbjct: 1 MKKLVSISFALILIVSIFSACSNEESKETKGNKKVLVMGTSADYKPYEYVDASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIQSVEGLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|197284576|ref|YP_002150448.1| arginine ABC transporter substrate-binding protein [Proteus mirabilis HI4320] gi|227356758|ref|ZP_03841143.1| arginine ABC superfamily ATP binding cassette transporter, substrate-binding protein [Proteus mirabilis ATCC 29906] gi|194682063|emb|CAR41589.1| arginine ABC transporter, substrate-binding protein [Proteus mirabilis HI4320] gi|227163048|gb|EEI47983.1| arginine ABC superfamily ATP binding cassette transporter, substrate-binding protein [Proteus mirabilis ATCC 29906] Length = 244 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 89/249 (35%), Gaps = 27/249 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++L I L T+ + ++ F + AN GFD Sbjct: 1 MKKILFAALLTSITLSATAA-----------DKETIRFATEATYPPFEMIDANNQIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ I + + + +L+ ++ D L D T R+ + F Sbjct: 50 VDLANAMCEKINAE---CTFTNQSFDSLIPSLKFRRFDALMAGIDITPERQK--QVDFTD 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI IS V+ L G I VQ GTT + + + K + ++ + Sbjct: 105 SYYDNSAVFITVTG-KISDVASLKGKQIGVQNGTTHQKFINEQHKE----MKTVPYDSYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R +A GD + + P ++ + + LA A+ +G+ + Sbjct: 160 NAVLDLKNGRIEAIFGDTAVVNEWL--KKNPELGIVGDKVTDPNYFGTGLAIAVRKGNAD 217 Query: 237 WYNIVSWTH 245 + ++ Sbjct: 218 LQDKLNKAL 226 >gi|56413131|ref|YP_150206.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362057|ref|YP_002141694.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127388|gb|AAV76894.1| cystine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093534|emb|CAR58996.1| cystine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 266 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 83/254 (32%), Gaps = 20/254 (7%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M V + L+ + +L +K+RG L G+ F+ + Sbjct: 1 MKLALLGRQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGED 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+VDF AL+ + P +L +K+ID++ + +R+ Sbjct: 61 GKLTGFEVDFAEALAKHLGVKA---SLKPTKWDGILASLDAKRIDVVINQVTISDVRKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I + + L G + V GT E L + Sbjct: 117 -KYDFSTPYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGV 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + D S+ A+ Sbjct: 172 DIRTYDDDLTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALR 229 Query: 232 QGDTEWYNIVSWTH 245 +G+ + V Sbjct: 230 KGNEDLLKAVDNAI 243 >gi|26246883|ref|NP_752923.1| arginine-binding periplasmic protein 2 [Escherichia coli CFT073] gi|117623040|ref|YP_851953.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli APEC O1] gi|227884176|ref|ZP_04001981.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli 83972] gi|237707176|ref|ZP_04537657.1| arginine-binding periplasmic protein 2 [Escherichia sp. 3_2_53FAA] gi|300817040|ref|ZP_07097259.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 107-1] gi|300824001|ref|ZP_07104123.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 119-7] gi|300901226|ref|ZP_07119328.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 198-1] gi|300921109|ref|ZP_07137493.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 115-1] gi|300924469|ref|ZP_07140439.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 182-1] gi|300929331|ref|ZP_07144804.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 187-1] gi|300935049|ref|ZP_07150081.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 21-1] gi|300991846|ref|ZP_07179671.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 200-1] gi|300993464|ref|ZP_07180406.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 45-1] gi|301020622|ref|ZP_07184697.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 69-1] gi|301051212|ref|ZP_07198041.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 185-1] gi|301325868|ref|ZP_07219301.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 78-1] gi|309795345|ref|ZP_07689763.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 145-7] gi|331646128|ref|ZP_08347231.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli M605] gi|331672399|ref|ZP_08373190.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli TA280] gi|26107283|gb|AAN79466.1|AE016758_70 Arginine-binding periplasmic protein 2 precursor [Escherichia coli CFT073] gi|115512164|gb|ABJ00239.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli APEC O1] gi|226898386|gb|EEH84645.1| arginine-binding periplasmic protein 2 [Escherichia sp. 3_2_53FAA] gi|227838928|gb|EEJ49394.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli 83972] gi|300297119|gb|EFJ53504.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 185-1] gi|300305456|gb|EFJ59976.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 200-1] gi|300355351|gb|EFJ71221.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 198-1] gi|300398598|gb|EFJ82136.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 69-1] gi|300406578|gb|EFJ90116.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 45-1] gi|300411960|gb|EFJ95270.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 115-1] gi|300419354|gb|EFK02665.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 182-1] gi|300459712|gb|EFK23205.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 21-1] gi|300462677|gb|EFK26170.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 187-1] gi|300523512|gb|EFK44581.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 119-7] gi|300530392|gb|EFK51454.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 107-1] gi|300847382|gb|EFK75142.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 78-1] gi|308120995|gb|EFO58257.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 145-7] gi|315287308|gb|EFU46719.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 110-3] gi|315292535|gb|EFU51887.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 153-1] gi|315299391|gb|EFU58643.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 16-3] gi|324009774|gb|EGB78993.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 57-2] gi|324013022|gb|EGB82241.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 60-1] gi|324015942|gb|EGB85161.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 117-3] gi|331044880|gb|EGI17007.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli M605] gi|331070594|gb|EGI41958.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli TA280] gi|332104598|gb|EGJ07944.1| arginine-binding periplasmic protein 2 [Shigella sp. D9] Length = 260 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 18 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S ++F Sbjct: 65 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 120 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P V + L A+ + Sbjct: 175 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 232 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 233 LLEKLNNALAAI 244 >gi|330806945|ref|YP_004351407.1| Putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375053|gb|AEA66403.1| Putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 266 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 74/227 (32%), Gaps = 12/227 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + L IK G +K G+ F+ V +G GF+V+F AL+ + ++ Sbjct: 27 AVAGEQLQKIKDAGEIKIGLEGTYPPFSFVDDSGKLTGFEVEFSEALAKELGVK---VKL 83 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GIS 138 AL+SK++D + + R+ + + K I Sbjct: 84 QTTPWAGILAALESKRLDAVVNQVTISEERKKKYDFSEPYTVSGIQALVLTKKADELNIK 143 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L G + V GT E + KA ++ R R D D Sbjct: 144 KAADLDGKKVGVGLGTNYEQWV----KAEVPGAQVKTYDDDPTKFQDLRVGRIDTILIDR 199 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A + + + + S+ A+ +G+ E V+ Sbjct: 200 LAALEY---AKKAKDTTVTSEAFSRQESGIALRKGEPELLAAVNKAI 243 >gi|229056619|ref|ZP_04196025.1| Extracellular solute-binding protein family 3 [Bacillus cereus AH603] gi|228720688|gb|EEL72246.1| Extracellular solute-binding protein family 3 [Bacillus cereus AH603] Length = 265 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 77/254 (30%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELSEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + E + + R D +T + L + ++ I+ S Sbjct: 170 EIVGVEGFSQAAELLSSGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G + V+ Sbjct: 229 KGSDKLVQEVNKAL 242 >gi|91209894|ref|YP_539880.1| arginine-binding periplasmic protein 2 [Escherichia coli UTI89] gi|91071468|gb|ABE06349.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli UTI89] Length = 260 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 18 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S ++F Sbjct: 65 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 120 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P V + L A+ + Sbjct: 175 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 232 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 233 LLEKLNNALAAI 244 >gi|25011543|ref|NP_735938.1| hypothetical protein gbs1501 [Streptococcus agalactiae NEM316] gi|76787172|ref|YP_330074.1| polar amino acid ABC transporter amino acid-binding protein [Streptococcus agalactiae A909] gi|24413082|emb|CAD47160.1| Unknown [Streptococcus agalactiae NEM316] gi|76562229|gb|ABA44813.1| polar amino acid uptake (PAAT) family ABC transporter, amino acid-binding protein [Streptococcus agalactiae A909] gi|319745365|gb|EFV97676.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Streptococcus agalactiae ATCC 13813] Length = 268 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 93/275 (33%), Gaps = 16/275 (5%) Query: 1 MYKDFFVSILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55 M K + IL L+ + S++ + ++K+G L ++ F V Sbjct: 1 MSKKIILGILSLLSVVTLVACGSSDKQLQDKVEKKGKLVLAVSPDYAPFEFKALVNGKDK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G D++ +A++ + K++ P++ +LQ+ + D+ +T R Sbjct: 61 VVGADIELAQAIADEL---HVKLEVSPMSFDNVLSSLQTGKADMAISGLSYTKERAKV-- 115 Query: 116 LAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F Y ++ K +S+ L G I VQ G+ E FK H Sbjct: 116 YDFSKPYYTTENAVLVRKSDLGKYTSIESLKGKKIAVQKGSIEEGVSKKSFK----NSHV 171 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + E + ++ + +A + N A A+ + Sbjct: 172 VSLTAMGEAISELKSGKVEAVDLEKPVAEGYLAQNPDLVLAKFALKTGEGDAKAVALPKD 231 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + V+ + ++ + + +++ + Sbjct: 232 SGKMLKTVNKVIKRLEKEDKYKVYISDAAKLTGNQ 266 >gi|239928548|ref|ZP_04685501.1| glutamate binding protein [Streptomyces ghanaensis ATCC 14672] gi|291436873|ref|ZP_06576263.1| glutamate binding periplasmic protein [Streptomyces ghanaensis ATCC 14672] gi|291339768|gb|EFE66724.1| glutamate binding periplasmic protein [Streptomyces ghanaensis ATCC 14672] Length = 282 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 76/219 (34%), Gaps = 8/219 (3%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 + + GI G + G + GFDVD ++ + D +I++ + +R L Sbjct: 41 KKKITIGIKFDQPGLGQKTPQG-YAGFDVDVATYVAKKLGYDEKQIEWKESKSADRETML 99 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQ 151 Q +D ++ T RE + F Q ++ I S L+ A +C Sbjct: 100 QRGDVDFIAATYSITPEREA--KVDFAGPYLLAHQDVLIRADDDSIKSPEDLNDAKLCSV 157 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 G+T+ + D K + + DA T D S L + Sbjct: 158 TGSTSAQNVKDKLA---PKAQLQPYPTYSACLPGLQNGAVDALTTDDSILAGYAAQDQFK 214 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + + ++ + +G ++ ++ AMV+ Sbjct: 215 GKFKLGGFKLTNENYGIGVKKG-SDLKAKINDALEAMVS 252 >gi|163941904|ref|YP_001646788.1| extracellular solute-binding protein [Bacillus weihenstephanensis KBAB4] gi|229134969|ref|ZP_04263775.1| Arginine-binding extracellular protein artP [Bacillus cereus BDRD-ST196] gi|163864101|gb|ABY45160.1| extracellular solute-binding protein family 3 [Bacillus weihenstephanensis KBAB4] gi|228648471|gb|EEL04500.1| Arginine-binding extracellular protein artP [Bacillus cereus BDRD-ST196] Length = 259 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N + + + L G + + V+A+ + G Sbjct: 1 MKKLLSISFALILIVSMFSACSNGEEKANGENKKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ F Sbjct: 61 FDVDIAKYIGKELGYE---VKVKDMDFGGLLASLNSGKVDFVMAGMTPTAERK--NNADF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I S+ L G + VQ G+ E ++ K + K +R Sbjct: 116 TDIYFVAKNMIVSKKGSNIKSLEDLKGKKVGVQTGSIQEEKAKEFQKQVDFKAEGR--DR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKE-LQGIEIQEAPEEVGAAIALPKNSDKTE 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|288572816|ref|ZP_06391173.1| extracellular solute-binding protein family 3 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568557|gb|EFC90114.1| extracellular solute-binding protein family 3 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 253 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 82/251 (32%), Gaps = 23/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L +S AS + L G + F GFD Sbjct: 1 MKKVLILCMAVLSFFVLSSTVLAASAMDK----DTLLVGTESTFKPFEFRNEENKIVGFD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++S + ++ + + +L + +ID+++ T R + F Sbjct: 57 IDLINTIASKMGKK---VEIVDMAFDALIPSLLTGKIDMIAAGMSATPERAKRVA--FSD 111 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y F + + I+S+ L G + VQ GT + D F + +++ Sbjct: 112 VYYTTPDAFTVKADRTDIASLDDLDGKKVSVQLGT-----IQDAFVSKRKGLEVKRYQKT 166 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 ++ R D D + K ++ + P+ A A+ D Sbjct: 167 DDAFREVLLGRVDVACVDGTVT---KENLKNNKDYTDTLKVAFFHPISQTGMALAMGLED 223 Query: 235 TEWYNIVSWTH 245 E V+ Sbjct: 224 MELKKNVNAAL 234 >gi|161502924|ref|YP_001570036.1| cystine transporter subunit [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864271|gb|ABX20894.1| hypothetical protein SARI_00983 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 282 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 84/254 (33%), Gaps = 20/254 (7%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M V + L+ + +L +++RG L G+ F+ + Sbjct: 17 MKLALLGRQALMGVMAVALVAGMSAKSFADEGLLNKVRERGTLLVGLEGTYPPFSFQGDD 76 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+VDF AL+ + P +L SK+ID++ + +R+ Sbjct: 77 GKLTGFEVDFAEALAKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDVRKK- 132 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I + ++L G + V GT E L + Sbjct: 133 -KYDFSTPYTVSGVQALVKKGNEGTIKTAAELQGKKVGVGLGTNYEEWLRQHV----QGV 187 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + D S+ A+ Sbjct: 188 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTKGTLAVTGDAFSRQESGVALR 245 Query: 232 QGDTEWYNIVSWTH 245 +G+ + V Sbjct: 246 KGNEDLLKAVDNAI 259 >gi|160935367|ref|ZP_02082749.1| hypothetical protein CLOBOL_00262 [Clostridium bolteae ATCC BAA-613] gi|158441725|gb|EDP19425.1| hypothetical protein CLOBOL_00262 [Clostridium bolteae ATCC BAA-613] Length = 278 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 89/228 (39%), Gaps = 11/228 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 ST L + K + G F +G G+DVD L+ ++ + + Sbjct: 34 GNSTQTGTLQKVLKERKMTVGCILSFPPFGYKSEDGTPMGYDVDMIHELADSLGVE---V 90 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + + A R +L++ ++D + N TL R + + F G+ ++ K GI+ Sbjct: 91 EIVEVTADARIPSLETGKVDAVFGNFTRTLER--AQKIDFSNPYVVAGERLLVKKGSGIN 148 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 +V L+G + V G+T A+ N + FE + A + +C + D Sbjct: 149 TVDDLTGKKVAVTKGSTN----AELMATLNPNAEVVFFETSADALQAVKNGQCATFLEDS 204 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + V+ +IS A + +GD +W N ++ + Sbjct: 205 --NFQQYQAAQNDDLEVVGDSLISLEYNAIGVKKGDQDWLNYLNLFIF 250 >gi|28870091|ref|NP_792710.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213966881|ref|ZP_03395031.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|301381564|ref|ZP_07229982.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302061680|ref|ZP_07253221.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato K40] gi|302131523|ref|ZP_07257513.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28853337|gb|AAO56405.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213928203|gb|EEB61748.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|330877719|gb|EGH11868.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330965183|gb|EGH65443.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 277 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 90/236 (38%), Gaps = 13/236 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQY 80 +A L D+ + L CG+ + F+ + G DVD C+AL+ + + ++ Sbjct: 20 AHADQLSDVMSKKSLSCGVYADVPPFSAPDPKTRELVGMDVDLCKALAKHMGVE---LEL 76 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 PL+ + R ++ ++D++ N +T R + + F Y + ++ Sbjct: 77 KPLSVEARIPEVKMGRVDVIFANLAYTRSR--ADQIQFSDPYYIAKETLVVRAANADQPK 134 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 S I G+T+E ++ P+ F+ A + ++ + Sbjct: 135 SFFKDKRISSTKGSTSEQSIR------LADATPVTFQDTGSAYMALQQNKVVGLVTNTMT 188 Query: 201 LYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L E I + ++ P+ + QG+ + V+ + YAM A E+ Sbjct: 189 AIKLVGQAKASGVELAIAKEPMALEPIGAGMRQGEPAFLAKVNESLYAMEAAGEID 244 >gi|298530982|ref|ZP_07018383.1| extracellular solute-binding protein family 3 [Desulfonatronospira thiodismutans ASO3-1] gi|298509005|gb|EFI32910.1| extracellular solute-binding protein family 3 [Desulfonatronospira thiodismutans ASO3-1] Length = 253 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 92/258 (35%), Gaps = 22/258 (8%) Query: 1 MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58 M + FF+ +L + +F + F+++ L ++T V F ++ G++ G Sbjct: 1 MKRSGFFLCLLLGVFMFMSMFASS-------LHAKKLTVAVDTAFVPFEFRDSDTGEYVG 53 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D A++ + + P++ ALQ+ +D T RE + F Sbjct: 54 FDIDLWDAIADRLGVEYE---LQPMDFSGIVPALQTGSVDAALAGITITAEREKV--VDF 108 Query: 119 RPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G ++ K I + G +I V+ GTT+ A + F Sbjct: 109 SHPYYDSGLSIMVMKDNDEIQGPEDIEGRTIAVRTGTTSADHAPRLNPA-----DIVQFP 163 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 +E RA R DA D + T + P + G +E Sbjct: 164 NIEAAYMEVRAGRVDAAMHDTPNVLYYIQTAGDDQVKAVGP-RMQSQSYGIGFPLG-SEL 221 Query: 238 YNIVSWTHYAMVTAEELG 255 N V+ +V + E Sbjct: 222 RNDVNVAFLELVDSGEYA 239 >gi|312958493|ref|ZP_07773013.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] gi|311287036|gb|EFQ65597.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] Length = 266 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 91/247 (36%), Gaps = 16/247 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++ L + +A + D +RG L+ G V F G GF+ Sbjct: 1 MIKRYCLAALICVAALIQHNLAHAGAIDDAARRGVLRVGTTPTYVPFEMTDKQGRIVGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++S A+ ++ + + E L +K+ D++ T R +L L F Sbjct: 61 IDLLASMSQALGVK---LELVSVPYTELLPGLMAKKFDLIGSGMTVTQER--NLKLNFSD 115 Query: 121 ITYFDGQGFIMH-----KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 GQ ++H K + + +G I V GTT E A + Sbjct: 116 SFIVVGQTVLLHPSLLGKVSSVEDLDD-AGYRIAVTEGTTGEAVAQRLLGAA----RLLS 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F EE + DA+ D + SE + L + PLA + +GD Sbjct: 171 FATPEEGVRQVVRGQADAFIYDAPYNLIALSRPEN-SELLALEQPFTFEPLAFGVKKGDF 229 Query: 236 EWYNIVS 242 + N ++ Sbjct: 230 DSLNWIN 236 >gi|302560614|ref|ZP_07312956.1| sugar-binding protein [Streptomyces griseoflavus Tu4000] gi|302478232|gb|EFL41325.1| sugar-binding protein [Streptomyces griseoflavus Tu4000] Length = 345 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 79/242 (32%), Gaps = 17/242 (7%) Query: 16 FFTSFSTNASILGDIKKRG----FLKCGINTGLVGFAEVKANG----DWKGFDVDFCRAL 67 + + + +IK R L G++ + NG +GFD+D + Sbjct: 69 TLSPSDADGRTIEEIKNRKGEKRKLIVGVDQNSYRWGYRDPNGGESGTLEGFDIDLVHRI 128 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + I D IQ+ + +R A+Q+ ++D++ R + +AF + GQ Sbjct: 129 AEDILGDRDAIQFKAIPTDQRIPAIQAGRVDMVVRTMTINC--DRIKDVAFSAPYFKTGQ 186 Query: 128 GFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHP---IVFERVEEID 183 + K I + L+ IC G+T L KA + + Sbjct: 187 QVLAPKSAPIEGYDETLADQEICTATGSTAYAKLEADKKAGRLPESTGIGTTVPNQLDCL 246 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + DA D + + + + + + A+ + + V+ Sbjct: 247 VRLQLGEVDAVVTDGALAASQAAQDP---TVELKGEAFTTEYYGVAMRKDADDMVRRVNR 303 Query: 244 TH 245 Sbjct: 304 IL 305 >gi|110804857|ref|YP_688377.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 5 str. 8401] gi|110614405|gb|ABF03072.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 5 str. 8401] Length = 243 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 83/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S ++F Sbjct: 48 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 103 PYYENSAVVISKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + T P V + + L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDQQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNNALAAI 227 >gi|87303445|ref|ZP_01086233.1| extracellular solute-binding protein, family 3 [Synechococcus sp. WH 5701] gi|87282093|gb|EAQ74055.1| extracellular solute-binding protein, family 3 [Synechococcus sp. WH 5701] Length = 299 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 47/225 (20%), Positives = 91/225 (40%), Gaps = 9/225 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKIQY 80 S+L + G L G + FA G G+ +D + I P K++ Sbjct: 25 GSLLQSVAASGVLVGGTSRDAFPFAYQNEEGQLVGYSIDMMNLIREEIERQTGRPIKLKL 84 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +PL+ +R +L+S ++++ + +T R+ + F G ++ + G+SS Sbjct: 85 VPLDTDQRLSSLESGAVNLVCDASSFTWSRDE--KVDFSVSYGITGTQLLVPRGSGLSSP 142 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G + V TT+ L +A A ++ + +E A + R DA+ D Sbjct: 143 ESLAGKRVGVLPRTTSVLAVASRQPAA----SLVLLKDRQEGYEALQQGRIDAFADDGML 198 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 LYA + + D S+ +A + Q ++ + +V Sbjct: 199 LYAWLQRQGGQAPFKVSADTYSREGIACMVPQNNSSFQRVVDLAL 243 >gi|331015352|gb|EGH95408.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 277 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 90/236 (38%), Gaps = 13/236 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQY 80 +A L D+ + L CG+ + F+ + G DVD C+AL+ + + ++ Sbjct: 20 AHADQLSDVMSKKSLSCGVYADVPPFSAPDPKTRELVGMDVDLCKALAKHMGVE---LEL 76 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 PL+ + R ++ ++D++ N +T R + + F Y + ++ Sbjct: 77 KPLSVEARIPEVKMGRVDVIFANLAYTKSR--ADQIQFSDPYYIAKETLVVRAANADQPK 134 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 S I G+T+E ++ P+ F+ A + ++ + Sbjct: 135 SFFKDKRISSTKGSTSEQSIR------LADATPVTFQDTGSAYMALQQNKVVGLVTNTMT 188 Query: 201 LYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L E I + ++ P+ + QG+ + V+ + YAM A E+ Sbjct: 189 AIKLVGQAKASGVELAIAKEPMALEPIGAGMRQGEPAFLAKVNESLYAMEAAGEID 244 >gi|212640610|ref|YP_002317130.1| glutamine ABC transporter periplasmic-binding component [Anoxybacillus flavithermus WK1] gi|212562090|gb|ACJ35145.1| ABC-type glutamine transport system, periplasmic-binding component [Anoxybacillus flavithermus WK1] Length = 265 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 69/250 (27%), Gaps = 12/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ +++ +S + + F + G+ GFD Sbjct: 1 MKKGIIATLVFMLMFALVGCG--SSTEKTATTEKKITVVTDASFAPFEYMN-KGEIVGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A+ + + F A+Q K D+ + F Sbjct: 58 VDLLKAVMKEAG---LAYELKNIGWDPLFAAIQGKTADMAVSGITIND--DRKQTYDFSI 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++ K I S L G + VQ GTT + + N + FE Sbjct: 113 PYFESTHMILVKKGSSIKSAKDLQGKVVGVQNGTTGQEAVEKILGKEN--PNIKKFENTV 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYN 239 +A D + N P+ +G +E Sbjct: 171 VAIMDLLNGGVEAVVTDNAVANEYVKNNPDAKIVAFEDPEHFESEFYGFMFPKG-SELKQ 229 Query: 240 IVSWTHYAMV 249 V ++ Sbjct: 230 KVDEALKKVI 239 >gi|322832150|ref|YP_004212177.1| cationic amino acid ABC transporter periplasmic binding protein [Rahnella sp. Y9602] gi|321167351|gb|ADW73050.1| cationic amino acid ABC transporter, periplasmic binding protein [Rahnella sp. Y9602] Length = 243 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 84/247 (34%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + L ++ ++ + F V ++ +GFD Sbjct: 1 MKKLVIAAVLATVSLSASAA-------------DTIRFAMEASYPPFEFVDSSNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + + + +L+ ++ D + D T R+ + F Sbjct: 48 VDLANAMCKEM---QATCTFTNQAFDSLIPSLKFRRFDAVISGMDITPERQKQVA--FTN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI H + + V+ L G + +Q GTT + L D + ++ + Sbjct: 103 PYYDNSAIFIAHSGQF-TDVAALKGKRVGMQNGTTHQKYLMDKHPE----ITAVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N I + L A+ Q +TE Sbjct: 158 NAVLDLKNGRLDAVFGDTAVVNEWLKQNKNLAAVGDKITDPTYFGTGLGVAVRQNNTELL 217 Query: 239 NIVSWTH 245 ++ Sbjct: 218 TKLNDAL 224 >gi|170769131|ref|ZP_02903584.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia albertii TW07627] gi|170122203|gb|EDS91134.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia albertii TW07627] Length = 248 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 82/245 (33%), Gaps = 20/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 53 LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + D + A +G + V Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKGSDALRDKV 222 Query: 242 SWTHY 246 + Sbjct: 223 NGALK 227 >gi|324112658|gb|EGC06634.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia fergusonii B253] Length = 243 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 82/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASCAFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ K+ D + D T R S ++F Sbjct: 48 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFKKYDAVISGMDITPER--SKQVSFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + T P V + L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNNALAAI 227 >gi|21223285|ref|NP_629064.1| bifunctional protein [Streptomyces coelicolor A3(2)] gi|20520711|emb|CAD30902.1| putative bifunctional protein [Streptomyces coelicolor A3(2)] Length = 670 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 75/227 (33%), Gaps = 6/227 (2%) Query: 32 KRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 R L G G + + G W GFDVD AL+ + +++ + + R Sbjct: 417 ARKRLTIGAKEDQPGLSFYNKDTGVWSGFDVDIAYALAGKLGYGKAQVDFYGVTTANRAS 476 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS-IC 149 L++ ++D++ + T RE G++F Y G ++ K + + Sbjct: 477 KLKNGEVDLVVASYSMTPEREKRDGISFVGPYYKAGSSLLVRKNSAKYDLGEAVDVKRNR 536 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ T + T AD + + +E R Y + + Sbjct: 537 VEVCTARDSTYADRLEEDGYTTGKWQPDTYKECVERLLDKRSSVYAVASDDVLLAGYAQN 596 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIV----SWTHYAMVTAE 252 P+ +LP P A+ + D + V AE Sbjct: 597 DPAHLKLLPSGAGTEPYGVAMRKDDPLLKSKVCSGLREILAGKEWAE 643 >gi|302388265|ref|YP_003824087.1| extracellular solute-binding protein family 3 [Clostridium saccharolyticum WM1] gi|302198893|gb|ADL06464.1| extracellular solute-binding protein family 3 [Clostridium saccharolyticum WM1] Length = 299 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 58/301 (19%), Positives = 107/301 (35%), Gaps = 48/301 (15%) Query: 1 MYKDFFVSILCLIILFFTSFST---------------------NASI----------LGD 29 M K +++ + T+ T S + Sbjct: 2 MKKMLSLALAFAAVASLTACGTKAPETTTAAPAETTAKEGTGTAGSTEAAGKGLAADVQK 61 Query: 30 IKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFD-------DPSKIQYL 81 I RG LK G + F+ A G+++GF+ D ++ IF + +++ Sbjct: 62 IIDRGVLKVGCKADIPKFSLQNTATGEYEGFEDDLAYEIAGTIFGCTAAEAKEKKLVEFQ 121 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + AK R L++ +ID++ T R+ + F Y D G +++K+ GI S+ Sbjct: 122 GVTAKTRGPLLENGEIDLVIATFTITPERKET--YNFSTPYYTDAVGLLVNKESGIDSIE 179 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHP--IVFERVEEIDAAYRAHRCDAYTGDIS 199 L G I V +TT+ Y +K +P F+ + A + D ++ D + Sbjct: 180 DLDGKIIGVAQSSTTKDGFKKYVDEKGLKVNPQFQEFDGYPALAQALATKQIDCFSVDRA 239 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 L + IL D ++ A + +T V +M++ L Q Sbjct: 240 ILAGYVN-----DGNQILQDRFAEQDYGVAAAKENTGLAAFVDEKITSMLSDGSLKALQD 294 Query: 260 N 260 Sbjct: 295 Q 295 >gi|228919287|ref|ZP_04082657.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840394|gb|EEM85665.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 264 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD++ AL+ + + + + LQ+K+ D++ + T R ++F Sbjct: 61 FDIEIGEALAKKMNMKATPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVSF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVTKKNTAISSPEDLKGKKIGVVKASTFKNLVA------KYTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|158340821|ref|YP_001521989.1| ABC transporter, periplasmic substrate-binding protein [Acaryochloris marina MBIC11017] gi|158311062|gb|ABW32675.1| ABC transporter, periplasmic substrate-binding protein [Acaryochloris marina MBIC11017] Length = 319 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 100/271 (36%), Gaps = 20/271 (7%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FDDPSKI 78 + ++L I++ + G N + FA G ++G+ ++ + + + + + Sbjct: 43 SAETVLEKIERTSTVTAGTNKNTLPFAFQDEQGQFQGYSIEMLKQIQAQLSKKLGKEINL 102 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + L ER L + ++DI+ + +T R+ + F G ++ + K Sbjct: 103 ELVALTPNERIPKLVAGEVDIVCDASSYTWERDK--DIDFSVSYGLTGTRLLIKQGKKAW 160 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L I AGTT E+ + K IV + A DA+ D Sbjct: 161 EPEMLVNQKIAAVAGTTNEIAIRR----AQPKAQIIVLPDHTQGYKALEQGTVDAFAADG 216 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 L T+ P + ++ S+ +A + + ++++ N V+++ + G Sbjct: 217 ILLEGWLQTSQNPEDFTVVG-YFSREGIACMVPENNSKFVNQVNYSLVRFMEGYLKG--- 272 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEAL 289 K+ R+ G + + + L Sbjct: 273 -------KEPYVKTFDRWFGPEAKVPLTQDL 296 >gi|145299602|ref|YP_001142443.1| ABC-type histidine/lysine/arginine/ornithine transporter, periplasmic binding protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142852374|gb|ABO90695.1| ABC-type histidine/lysine/arginine/ornithine transporter, periplasmic binding protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 257 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 85/254 (33%), Gaps = 24/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + + + K+ ++ G+ F+ + +G+ KGFD Sbjct: 1 MNKLMLATAIVTALSSGSLMA---------KEWKEVRIGVEGAYPPFSWTEPSGEVKGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + K + + AL S++ D + D T R+ + F Sbjct: 52 IDIANALCAEM---KVKCTLVKQDWDGIIPALLSRKYDAIIATMDITEERKK--KVDFTQ 106 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F K + + + G ++ VQ T+ + + D F + Sbjct: 107 KYQHIPARFAAKKGTDVQLDKAFMDGKAVAVQRATSMDTYITDNFP----NATIKRYGTA 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +E ++ R D D +A+ L + + ++ A+ + D Sbjct: 163 DEAYLDLKSGRVDYVLADSAAITDGLLKKEGGDGFEFVGPKLTDPKWFGEGAGIAVRKAD 222 Query: 235 TEWYNIVSWTHYAM 248 + + A+ Sbjct: 223 KDLKEKFNTAILAL 236 >gi|104784119|ref|YP_610617.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas entomophila L48] gi|95113106|emb|CAK17834.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas entomophila L48] Length = 253 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 86/250 (34%), Gaps = 18/250 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 YK FF++ +++ + + L+ GI F A+G GFD Sbjct: 4 YKKFFLAAAATLVMSANAMAAE-----------KLRMGIEAAYPPFNNKDASGQVVGFDK 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D AL + + + + + + AL +K+ D + + T R+ + F Sbjct: 53 DIGDALCAKMKVE---CEVVTSDWDGIIPALNAKKFDFIVSSLSITDERK--QAVDFTDP 107 Query: 122 TYFDGQGFI-MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + Q FI K + + L G +I Q T L D + +++ E Sbjct: 108 YYSNKQQFIAPKKVDFKTDRASLKGKTIGTQRATQAATWLDDNGGLDG-DFKVNLYDGQE 166 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + R DA D A Y + + + A+ +GD E N Sbjct: 167 NAYLDLTSGRVDAILADKYANYDWLKSKAGQDYEFKGDPVNESDKVGIAVRKGDNELRNK 226 Query: 241 VSWTHYAMVT 250 ++ +V Sbjct: 227 LNAALKEIVA 236 >gi|229101614|ref|ZP_04232337.1| Extracellular solute-binding protein family 3 [Bacillus cereus Rock3-28] gi|228681856|gb|EEL36010.1| Extracellular solute-binding protein family 3 [Bacillus cereus Rock3-28] Length = 265 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 74/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMIANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSKPYVSSSAVLVIAKDKDKPATFADVKGLK-AAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 E + R D +T + L + ++ I+ S Sbjct: 170 EITNVEGFSQAAELLNTGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G + V Sbjct: 229 KGSDKLVQEVDKAL 242 >gi|76788144|ref|YP_329665.1| polar amino acid ABC transporter amino acid-binding protein [Streptococcus agalactiae A909] gi|76563201|gb|ABA45785.1| polar amino acid uptake (PAAT) family ABC transporter, amino acid-binding protein [Streptococcus agalactiae A909] Length = 277 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 34/254 (13%), Positives = 76/254 (29%), Gaps = 14/254 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDI------KKRGFLKCGINTGLVGFAEVKANGD 55 I L ++ ++ + + I +K + G + V +GD Sbjct: 5 KNILLTIIFGLFMIILSACGMSNKEMAGIDNWEHYQKEKKITIGFDNTFVPMGFESRSGD 64 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D A+ +++ P+N + L + ID++ T R Sbjct: 65 YTGFDIDLANAVFKEYG---ISVKWQPINWDMKETELNNGNIDLIWNGYSKTAERAK--K 119 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 +AF + Q + I+S+ + G + Q+G++ D K Sbjct: 120 VAFTNPYMNNHQVIVTKTSSHINSIKDMKGKKLGAQSGSSGFDAFNAKPDILKKFVKGKE 179 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + ++ + + +R D D + + + Sbjct: 180 AVQYDTFTQALIDLKNNRIDGLLIDEVYANYYLKQEGNIKAYYFVKTAYQGENFVVGARK 239 Query: 233 GDTEWYNIVSWTHY 246 D ++ Sbjct: 240 VDRRLIEKINKAFK 253 >gi|323976755|gb|EGB71843.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TW10509] Length = 243 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 82/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASCAFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S ++F Sbjct: 48 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + T P V + L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNNALAAI 227 >gi|16759800|ref|NP_455417.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764251|ref|NP_459866.1| arginine transport system [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167992143|ref|ZP_02573241.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230797|ref|ZP_02655855.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236835|ref|ZP_02661893.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240771|ref|ZP_02665703.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263590|ref|ZP_02685563.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168466508|ref|ZP_02700370.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168819946|ref|ZP_02831946.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194451374|ref|YP_002044920.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194472996|ref|ZP_03078980.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194735976|ref|YP_002113983.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197264800|ref|ZP_03164874.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198245831|ref|YP_002214854.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204929825|ref|ZP_03220846.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205352139|ref|YP_002225940.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|213021407|ref|ZP_03335854.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213052700|ref|ZP_03345578.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213418750|ref|ZP_03351816.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213428039|ref|ZP_03360789.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580628|ref|ZP_03362454.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213609524|ref|ZP_03369350.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213647845|ref|ZP_03377898.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|238913407|ref|ZP_04657244.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289804213|ref|ZP_06534842.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289825016|ref|ZP_06544379.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25296354|pir||AG0607 arginine-binding periplasmic protein 1 precursor [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16419398|gb|AAL19825.1| arginine transport system [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502093|emb|CAD05329.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Typhi] gi|194409678|gb|ACF69897.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194459360|gb|EDX48199.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711478|gb|ACF90699.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630902|gb|EDX49488.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197243055|gb|EDY25675.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290097|gb|EDY29454.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197940347|gb|ACH77680.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204320819|gb|EDZ06020.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205271920|emb|CAR36763.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205329600|gb|EDZ16364.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334641|gb|EDZ21405.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339789|gb|EDZ26553.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343109|gb|EDZ29873.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347815|gb|EDZ34446.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261246145|emb|CBG23948.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992652|gb|ACY87537.1| arginine transport system [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|312911917|dbj|BAJ35891.1| arginine ABC transporter substrate binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085164|emb|CBY94951.1| Arginine-binding periplasmic protein Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223251|gb|EFX48320.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616364|gb|EFY13273.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619614|gb|EFY16489.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622690|gb|EFY19535.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628602|gb|EFY25389.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631539|gb|EFY28295.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637066|gb|EFY33769.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641735|gb|EFY38371.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644472|gb|EFY41012.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650067|gb|EFY46484.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654140|gb|EFY50463.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658055|gb|EFY54322.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663529|gb|EFY59731.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670265|gb|EFY66405.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671501|gb|EFY67623.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676857|gb|EFY72924.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682782|gb|EFY78801.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686461|gb|EFY82443.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323196085|gb|EFZ81248.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196769|gb|EFZ81913.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202952|gb|EFZ87986.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208992|gb|EFZ93929.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211897|gb|EFZ96725.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215171|gb|EFZ99916.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222374|gb|EGA06752.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223890|gb|EGA08189.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229849|gb|EGA13972.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233074|gb|EGA17170.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240809|gb|EGA24851.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243126|gb|EGA27146.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248668|gb|EGA32596.1| putative ABC transporter arginine-biding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251669|gb|EGA35536.1| putative ABC transporter arginine-biding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257343|gb|EGA41041.1| putative ABC transporter arginine-biding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261931|gb|EGA45497.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267947|gb|EGA51426.1| putative ABC transporter arginine-biding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271986|gb|EGA55401.1| putative ABC transporter arginine-biding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 243 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 83/247 (33%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + F Sbjct: 48 VDLANALCKEI---DASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217 Query: 239 NIVSWTH 245 + Sbjct: 218 QKFNTAL 224 >gi|25010991|ref|NP_735386.1| hypothetical protein gbs0937 [Streptococcus agalactiae NEM316] gi|23095391|emb|CAD46596.1| Unknown [Streptococcus agalactiae NEM316] Length = 276 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 34/254 (13%), Positives = 76/254 (29%), Gaps = 14/254 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDI------KKRGFLKCGINTGLVGFAEVKANGD 55 I L ++ ++ + + I +K + G + V +GD Sbjct: 4 KNILLTIIFGLFMIILSACGMSNKEMAGIDNWEHYQKEKKITIGFDNTFVPMGFESRSGD 63 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D A+ +++ P+N + L + ID++ T R Sbjct: 64 YTGFDIDLANAVFKEYG---ISVKWQPINWDMKETELNNGNIDLIWNGYSKTAERAK--K 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 +AF + Q + I+S+ + G + Q+G++ D K Sbjct: 119 VAFTNPYMNNHQVIVTKTSSHINSIKDMKGKKLGAQSGSSGFDAFNAKPDILKKFVKGKE 178 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + ++ + + +R D D + + + Sbjct: 179 AVQYDTFTQALIDLKNNRIDGLLIDEVYANYYLKQEGNIKAYYFVKTAYQGENFVVGARK 238 Query: 233 GDTEWYNIVSWTHY 246 D ++ Sbjct: 239 VDRRLIEKINKAFK 252 >gi|254718966|ref|ZP_05180777.1| extracellular solute-binding protein [Brucella sp. 83/13] Length = 293 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 77/252 (30%), Gaps = 20/252 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + F C +I+ F + ++ L G F + +G GFDVD Sbjct: 33 RGFKRIAACAVIVGFAAIGAA-----RAEEPLKLVIGTEGAYPPFNFINPDGSLSGFDVD 87 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 RAL + ++ ++ ALQ+ + D + T R+ + F Sbjct: 88 IARALCDEM---KAECTFITQEWDGTIPALQAGKFDAYVSSMSITEERKK--QVDFSDKY 142 Query: 123 YFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G K I + L+G +I VQ TT F + E Sbjct: 143 YNTPLGVAAPKDTDIKGVTKEDLAGKTIGVQVSTTHANYAEQVF----TDSTIKAYPTAE 198 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV----ILPDIISKSPLAPAIIQGDTE 236 E R DA D L T D + D I + A +G E Sbjct: 199 EYRLDLANGRLDAVNDDSVTLSEWLKTPDGACCKMVGTYPPDDAIHGVGVGVAFKKGRPE 258 Query: 237 WYNIVSWTHYAM 248 + A+ Sbjct: 259 LVEKFNAAIKAI 270 >gi|283796770|ref|ZP_06345923.1| extracellular solute-binding protein, family 3 [Clostridium sp. M62/1] gi|291075658|gb|EFE13022.1| extracellular solute-binding protein, family 3 [Clostridium sp. M62/1] Length = 302 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 46/287 (16%), Positives = 84/287 (29%), Gaps = 47/287 (16%) Query: 1 MYKDFFVSILCLIILF-FTSFSTNASILG------------------------------- 28 M K F + ++F T+ STNA Sbjct: 1 MKKKVFSVMTAAALVFSLTACSTNAKTEEPETAAQSSASQTEAAGAETAESSGGASAEAG 60 Query: 29 ------DIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + K G G + V +G++ GFD++ ++ + Sbjct: 61 EKAASGETKAAGDTFTVGFDQDFPPMGFVGDDGEYTGFDLELAAEVADRLG---LTFVPQ 117 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ + + L+S ID + T + + + Q ++ + GI S + Sbjct: 118 PIAWDAKNMELESGNIDCIWNGFTMTGREDE---YTWSEPYMENSQVVVVLEDSGIESTA 174 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + VQA ++ E L + + DA D + Sbjct: 175 DLAGKIVEVQADSSAEAALKEMPELTESFAALQTTPDYNTAFMDLEMGSVDAIAMD--VI 232 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 A R IL D ++ A +G+ + V M Sbjct: 233 VAGYQLQQRDGGFKILDDTLASEEYAIGFKKGNEALRDQVQTVLDEM 279 >gi|297243524|ref|ZP_06927456.1| ABC-type amino acid transport/signal transduction system, periplasmic component [Gardnerella vaginalis AMD] gi|296888569|gb|EFH27309.1| ABC-type amino acid transport/signal transduction system, periplasmic component [Gardnerella vaginalis AMD] Length = 255 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 86/218 (39%), Gaps = 9/218 (4%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 + ++ GI G +G + GFDVD + ++ + +I + +K+R L Sbjct: 12 KKVIRIGIKFDQPGIGFK-KSGTYVGFDVDVAKYVAKKLGYSEDQIVWKESPSKQRETML 70 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQ 151 Q+ +D++ + T R+ + F + GQ ++ K + +S + L G +C Sbjct: 71 QNGDVDMIVASYSITDARKKM--VTFAGPYFIAGQDLLVRKDEHKVSGPNDLDGKRLCSV 128 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 +G+T+ + + + + + K + E A + DA T D L L + Sbjct: 129 SGSTSAIAIKERYSS---KVQLMQQPGYAECATALFSGIVDAVTTDDIILAGLATASR-- 183 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 ++ + I +G+T ++ M+ Sbjct: 184 GRLKLVNKPFTAEYYGIGIKKGNTGLAKKINAALKDMI 221 >gi|166032314|ref|ZP_02235143.1| hypothetical protein DORFOR_02017 [Dorea formicigenerans ATCC 27755] gi|166028037|gb|EDR46794.1| hypothetical protein DORFOR_02017 [Dorea formicigenerans ATCC 27755] Length = 296 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 93/262 (35%), Gaps = 31/262 (11%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-------------------ILGDIKKRGFLKCGINT 42 K ++ + + +++S L +IKK G + G+ + Sbjct: 7 KKLITLATVVASTFALVACGSSSSDDSKGSDSSAKKDSGTVYRTLDEIKKDGTINIGVFS 66 Query: 43 GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 F V NG+++G+DV F + + + ++ A R LQ+ ++D++ Sbjct: 67 DKNPFGYVDENGEYQGYDVYFANRIGEDLGVK---VNFVSTEAANRIEYLQTGKVDLILA 123 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS-QLSGASICVQAGTTTELTLA 161 N T R + F G + I S+ S + V +GTT E L Sbjct: 124 NFTVTDERAE--EVDFALPYMNVALGVVSPDSNVIKSLDKWNSKDQMIVISGTTAETYLT 181 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 + + ++ A A+ D + + A V + ++ Sbjct: 182 E----NYPDIPLQKYDSYATAKNALENGNGVAWANDNTEVIAFA--LQNKGYTVGISELG 235 Query: 222 SKSPLAPAIIQGDTEWYNIVSW 243 +K +APA+ +G+ + V+ Sbjct: 236 NKDTIAPAVSKGNDTLLDWVNE 257 >gi|325063352|gb|ADY67042.1| amino acid ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 278 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 84/251 (33%), Gaps = 13/251 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCR 65 +++ + + A L I L+C +V FA + GFDVD C Sbjct: 6 LTLTVALAGTALASPAAADQLDTIMANKVLRCATFADVVPFAAPDPKTREMAGFDVDLCN 65 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++ + P++ + R ++ ++DI N +T R + F Y Sbjct: 66 AIAKELGVKAEV---KPVSVEARVPEVKLGRVDITVANLAYTQSRAEQIQ--FSDPYYLA 120 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + I+ S G + G+T+E+++ K P+ F+ A Sbjct: 121 KEMLIVPVDDAGKKKSDYEGQRVASTKGSTSEMSI------KLNKSEPLTFQDTASAYLA 174 Query: 186 YRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + + + + + ++ + + P+ + + + ++ Sbjct: 175 VQQGKARGMVANTMTTTKFVNESKTKGKPMRMIEEPMLYQPIGVGMAKDNPALTAKINEV 234 Query: 245 HYAMVTAEELG 255 + + E+ Sbjct: 235 LRTLDASGEIN 245 >gi|284007899|emb|CBA73838.1| arginine ABC transporter, substrate-binding protein [Arsenophonus nasoniae] Length = 247 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 86/249 (34%), Gaps = 25/249 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ILC + L + + ++ F + AN + GFD Sbjct: 1 MKKSLLAIILCSLSLPILATTKE-----------TIRFATEATYAPFESIDANNNIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + + + + +L+ ++ D L D T R+ + F Sbjct: 50 IDLANAICKKL---DANCTFTHQSFDSLIPSLKMRRFDALIAGIDITPERQK--QVNFTD 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K I+ +S L G I VQ GTT + + K + ++ + Sbjct: 105 TYYNNSATFIAVK-NKINKISLLKGKKIGVQNGTTHQKYIIQQHKE----MQAVPYDNYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R DA GD + T + + + + LA A+ +G+ Sbjct: 160 TAILDLQNGRIDAVFGDTAVTTEWLKTKGNENLAAVGEKVTDANYFGVGLAIAVRKGNKT 219 Query: 237 WYNIVSWTH 245 + ++ Sbjct: 220 LLDKLNKAL 228 >gi|229061836|ref|ZP_04199167.1| Arginine-binding extracellular protein artP [Bacillus cereus AH603] gi|228717445|gb|EEL69112.1| Arginine-binding extracellular protein artP [Bacillus cereus AH603] Length = 259 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N + + + L G + + V+A+ + G Sbjct: 1 MKKLLSISFALILIVSMFSACSNGEEKANGENKKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ F Sbjct: 61 FDVDIAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNADF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I S+ L G + VQ G+ E ++ K + K +R Sbjct: 116 TDIYFVAKNMIVSKKGSNIKSLEDLKGKKVGVQTGSIQEEKAKEFQKQVDFKAEGR--DR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKKYLEKMKE-LQGIEIQEAPEEVGAAIALPKNSDKTE 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|218234758|ref|YP_002365196.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus B4264] gi|229148756|ref|ZP_04277006.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus m1550] gi|218162715|gb|ACK62707.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus B4264] gi|228634764|gb|EEK91343.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus m1550] Length = 264 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + + + + LQ+K+ D++ + T R ++F Sbjct: 61 FDVEIGEALAKKMNMKATPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVSF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNNAISSPEDLKGKKIGVVKASTFKNLVA------KYTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|313902716|ref|ZP_07836114.1| extracellular solute-binding protein family 3 [Thermaerobacter subterraneus DSM 13965] gi|313467013|gb|EFR62529.1| extracellular solute-binding protein family 3 [Thermaerobacter subterraneus DSM 13965] Length = 293 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 78/228 (34%), Gaps = 15/228 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANG--DWKGFDVDFCRALSSAIFDDPSKI 78 S S+L +IK+RG++ + + GFD+D +A++ + + + Sbjct: 58 SGEKSLLDEIKERGYMTFATDGAYPPMEFPDPENPSELIGFDIDLGKAIAEKLGVEHRAV 117 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGI 137 ++ L+S + D++ + + T R+ F + KGI Sbjct: 118 V---VDWDGILAGLESGRYDVVMSSMNITEERQK--SADFVQYFEMGQMIVVAKGNPKGI 172 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S+ L G I VQ GTT E A F+ + R DA D Sbjct: 173 HSLDDLKGKVIAVQIGTTNEEIARGIEGA-----TVKTFQTFPDALKEVHVGRADATILD 227 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + + ++P+ A+ +G+ + + Sbjct: 228 EPVARYYANIEGDK--YEFVGEPFERAPVGIAVAKGNEDLVQAIQKAL 273 >gi|303248475|ref|ZP_07334733.1| extracellular solute-binding protein family 3 [Desulfovibrio fructosovorans JJ] gi|302490095|gb|EFL50015.1| extracellular solute-binding protein family 3 [Desulfovibrio fructosovorans JJ] Length = 271 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 85/258 (32%), Gaps = 21/258 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGLVGFAEV 50 M + + L + L ++ L I +RG L G+ F V Sbjct: 1 MVRFIRIISLAFVALTMCCGPAVSATTPFDIYEGSNLRKIVQRGTLVVGMELKFWPFEYV 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G+ GFDVD + L+ + ++ + AL + +ID++ TL R Sbjct: 61 DKEGNPVGFDVDIAKTLADRLGVK---LEIKDMEWTGLIPALTAGKIDLIISGISGTLER 117 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHN 168 S+ T + + +V L G + V+ GTT +L F Sbjct: 118 AKSITFTSPYFTTGLCALLSAKRAGDVKNVDALNAPGRVLAVKTGTTADLVATKKFTKA- 176 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 ++ A R DA+ D ++ K P + + P Sbjct: 177 ---TINRYKDETACVQEVVAGRADAFFYDQISIA--KHHKQNPEATKAILKPFTYEPFCI 231 Query: 229 AIIQGDTEWYNIVSWTHY 246 A+ +GD +W+ + Sbjct: 232 ALQKGDFDWWQWLEMYLT 249 >gi|301157472|emb|CBW16962.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] Length = 243 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 84/247 (34%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + F Sbjct: 48 VDLANALCKEI---DASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + + ++ + Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKYPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217 Query: 239 NIVSWTH 245 + Sbjct: 218 QKFNTAL 224 >gi|254758427|ref|ZP_05210454.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Australia 94] Length = 265 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGYGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 I E + + R D D ++ T ++ + + Sbjct: 170 EIIGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G T+ V Sbjct: 229 KGSTKLVQEVDKAL 242 >gi|228963946|ref|ZP_04125081.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis serovar sotto str. T04001] gi|228795797|gb|EEM43270.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis serovar sotto str. T04001] Length = 260 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 I E + + R D D ++ T ++ + + Sbjct: 170 EIIGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G T+ V Sbjct: 229 KGSTKLVQEVDKAL 242 >gi|229171631|ref|ZP_04299206.1| Extracellular solute-binding protein family 3 [Bacillus cereus MM3] gi|228611777|gb|EEK69024.1| Extracellular solute-binding protein family 3 [Bacillus cereus MM3] Length = 265 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSSPYVSSSAVLVIAKDKDKPATFADVKGLK-AAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 E + R D +T + L + ++ I+ S Sbjct: 170 EITNVEGFSQAAELLNTGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G + V+ Sbjct: 229 KGSDKVVQEVNKAL 242 >gi|22537110|ref|NP_687961.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 2603V/R] gi|22533971|gb|AAM99833.1|AE014235_6 amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 2603V/R] Length = 276 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 34/254 (13%), Positives = 76/254 (29%), Gaps = 14/254 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDI------KKRGFLKCGINTGLVGFAEVKANGD 55 I L ++ ++ + + I +K + G + V +GD Sbjct: 4 KNILLTIIFGLFMIILSACGMSNKEMAGIDNWEHYQKEKKITIGFDNTFVPMGFESRSGD 63 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D A+ +++ P+N + L + ID++ T R Sbjct: 64 YTGFDIDLANAVFKEYG---ISVKWQPINWDMKETELNNGNIDLIWNGYSKTAERAK--K 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYH 172 +AF + Q + I+S+ + G + Q+G++ D K Sbjct: 119 VAFTNPYMNNHQVIVTKTSSHINSIKDMKGKKLGAQSGSSGFDAFNAKPDILKKFVKGKE 178 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + ++ + + +R D D + + + Sbjct: 179 AVQYDTFTQALIDLKNNRIDGLLIDEVYANYYLKQEGNIKAYYFVKTAYQGENFVVGARK 238 Query: 233 GDTEWYNIVSWTHY 246 D ++ Sbjct: 239 VDRRLIEKINKAFK 252 >gi|30260991|ref|NP_843368.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Ames] gi|47526143|ref|YP_017492.1| amino acid ABC transporter amino acid-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49183836|ref|YP_027088.1| amino acid ABC transporter amino acid-binding protein [Bacillus anthracis str. Sterne] gi|65318268|ref|ZP_00391227.1| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Bacillus anthracis str. A2012] gi|75761725|ref|ZP_00741666.1| Cystine-binding protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|165871941|ref|ZP_02216583.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0488] gi|167635930|ref|ZP_02394238.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0442] gi|167638898|ref|ZP_02397172.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0193] gi|170687588|ref|ZP_02878804.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0465] gi|170708288|ref|ZP_02898733.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0389] gi|177653896|ref|ZP_02935968.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0174] gi|190566744|ref|ZP_03019661.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis Tsiankovskii-I] gi|196035161|ref|ZP_03102567.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus W] gi|206967580|ref|ZP_03228536.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH1134] gi|218895896|ref|YP_002444307.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus G9842] gi|218902065|ref|YP_002449899.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH820] gi|227816277|ref|YP_002816286.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. CDC 684] gi|228899528|ref|ZP_04063784.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis IBL 4222] gi|228906600|ref|ZP_04070476.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis IBL 200] gi|228919694|ref|ZP_04083056.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228926025|ref|ZP_04089106.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229120486|ref|ZP_04249733.1| Extracellular solute-binding protein family 3 [Bacillus cereus 95/8201] gi|229602873|ref|YP_002865431.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0248] gi|254682948|ref|ZP_05146809.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. CNEVA-9066] gi|254725736|ref|ZP_05187518.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A1055] gi|254734362|ref|ZP_05192075.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Western North America USA6153] gi|254739990|ref|ZP_05197682.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Kruger B] gi|254753329|ref|ZP_05205365.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Vollum] gi|30254440|gb|AAP24854.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Ames] gi|47501291|gb|AAT29967.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49177763|gb|AAT53139.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Sterne] gi|74490779|gb|EAO54054.1| Cystine-binding protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|164712372|gb|EDR17907.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0488] gi|167513028|gb|EDR88400.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0193] gi|167528747|gb|EDR91506.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0442] gi|170126809|gb|EDS95691.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0389] gi|170668401|gb|EDT19148.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0465] gi|172081124|gb|EDT66201.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0174] gi|190562296|gb|EDV16264.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis Tsiankovskii-I] gi|195992225|gb|EDX56187.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus W] gi|206736500|gb|EDZ53647.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH1134] gi|218539124|gb|ACK91522.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH820] gi|218543043|gb|ACK95437.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus G9842] gi|227007853|gb|ACP17596.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. CDC 684] gi|228663071|gb|EEL18664.1| Extracellular solute-binding protein family 3 [Bacillus cereus 95/8201] gi|228833737|gb|EEM79293.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228840048|gb|EEM85327.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228853149|gb|EEM97927.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis IBL 200] gi|228860118|gb|EEN04522.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis IBL 4222] gi|229267281|gb|ACQ48918.1| amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. A0248] Length = 265 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 I E + + R D D ++ T ++ + + Sbjct: 170 EIIGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G T+ V Sbjct: 229 KGSTKLVQEVDKAL 242 >gi|228937646|ref|ZP_04100283.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970535|ref|ZP_04131185.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977105|ref|ZP_04137506.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis Bt407] gi|228782553|gb|EEM30730.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis Bt407] gi|228789122|gb|EEM37051.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228822020|gb|EEM68011.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938142|gb|AEA14038.1| cystine-binding protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 264 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + + + + LQ+K+ D++ + T R ++F Sbjct: 61 FDVEIGEALAKKMNMKATPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVSF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTAISSPEDLKGKKIGVVKASTFKNLVA------KYTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEQVNKALDEII 239 >gi|229009852|ref|ZP_04167072.1| Amino acid ABC transporter, solute binding protein [Bacillus mycoides DSM 2048] gi|228751470|gb|EEM01276.1| Amino acid ABC transporter, solute binding protein [Bacillus mycoides DSM 2048] Length = 264 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESATSSSNGEKEFRYAMSGLYKPFNYKENDGKLAG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + P+ I + LQSK+ D + + T R ++F Sbjct: 61 FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLQSKKYDAILGSMAITEER--LKAVSF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KHTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|200389730|ref|ZP_03216341.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199602175|gb|EDZ00721.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 245 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 83/247 (33%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 3 MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + F Sbjct: 50 VDLANALCKEI---DASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + ++ + Sbjct: 105 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 160 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLVPVGDKVTDKDYFGTGLGIAVRQGNTELQ 219 Query: 239 NIVSWTH 245 + Sbjct: 220 QKFNTAL 226 >gi|30062342|ref|NP_836513.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2a str. 2457T] gi|56479746|ref|NP_706740.2| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2a str. 301] gi|30040587|gb|AAP16319.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2a str. 2457T] gi|56383297|gb|AAN42447.2| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2a str. 301] gi|281600183|gb|ADA73167.1| Arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2002017] gi|313650233|gb|EFS14645.1| arginine-binding periplasmic protein 2 [Shigella flexneri 2a str. 2457T] Length = 243 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 82/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S ++F Sbjct: 48 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 103 PYYENSAVVISKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + T P V + L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNNALAAI 227 >gi|307328497|ref|ZP_07607672.1| extracellular solute-binding protein family 3 [Streptomyces violaceusniger Tu 4113] gi|306885909|gb|EFN16920.1| extracellular solute-binding protein family 3 [Streptomyces violaceusniger Tu 4113] Length = 351 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 82/242 (33%), Gaps = 16/242 (6%) Query: 15 LFFTSFSTNASILGDIKKR-------GFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRA 66 S + + IK R L G++ + GD GFD+D RA Sbjct: 75 ASLRPSSASGPAIKRIKNREVNGHKLNKLIAGVDQNSYRWGYRDPATGDLTGFDIDLVRA 134 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ IF DP + + + +R ALQ ++D++ R + +AF + G Sbjct: 135 IAEDIFGDPDAVIFRTIPTSQRIKALQQGKVDVVVRTMTINC--DRIKDVAFSTAYFQAG 192 Query: 127 QGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLA--DYFKAHNMKYHPIVFERVEEID 183 Q ++ I+ ++ L G +C G+T E L D H + Sbjct: 193 QQVLVADDSSITGYNKTLRGKRVCTAQGSTAEAELDKPDTGAEHLGAIKVKPVPNQLDCL 252 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + + DA D + + ++ + A+ + D + V+ Sbjct: 253 VRLQLGQVDAVITDNALAAGQAAQDP---SVKLVGSRFTDEFYGVAMNKDDDDLVRRVNK 309 Query: 244 TH 245 Sbjct: 310 VL 311 >gi|212705002|ref|ZP_03313130.1| hypothetical protein DESPIG_03070 [Desulfovibrio piger ATCC 29098] gi|212671554|gb|EEB32037.1| hypothetical protein DESPIG_03070 [Desulfovibrio piger ATCC 29098] Length = 246 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 83/249 (33%), Gaps = 22/249 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +++ L+++ + L + G + G+ Sbjct: 1 MIRKLTLALCFLVLMSSAVAA------------KTLVVAGHCGYPPMEYLNDKKVPTGYS 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D+ + ++ D +++ + F L S DIL+ +T T R+ + F Sbjct: 49 IDYIKEVAKRAGFD---MKFRDVAWDGIFAGLASGNYDILASSTTITPERQKT--FDFSD 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y Q +M K K I S++ L G ++ Q G T L N+ ++ + Sbjct: 104 PYYGVVQAVVMAKGKKIDSLAGLKGLTVGSQIGITGVFVLQ----KANVGAKIKEYDDIG 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYN 239 A R DA D + + + + + +G+TE Sbjct: 160 LAFEDLAAGRIDAVIADDPVAKFYANKREDFAGKFSVAYLHKDPEYFGFCVRKGETELVK 219 Query: 240 IVSWTHYAM 248 ++ AM Sbjct: 220 RINKAIAAM 228 >gi|323467040|gb|ADX70727.1| Glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus H10] Length = 272 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 86/233 (36%), Gaps = 10/233 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 L N ++ +K+ + G+ F G +GF++D AL+ + Sbjct: 19 ALIACGKRNNQNVYQKVKESKHIIWGVRADTRLFGLTNVKTGKIEGFEIDLAHALTKQML 78 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 + ++ A R L++ ID + T R + F + G ++ Sbjct: 79 GKDATASFVTTTANTRIPLLKNGNIDAVLATMTITPERAK--QVDFSKPYFPAGSSLLVP 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I +V L+G ++ GTT + + + ++ + +A +A++ Sbjct: 137 DNSKIKNVKDLNGETVLAVKGTTAVDDVHKFAPKA----RVLQYDDYGQAMSALKANQGV 192 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A T D L + + P + ++ + + +P A+ +G + + ++ Sbjct: 193 ALTTDNGLLAGIAQ--ENPG-YKLVGGVYNNAPYGIAVNKGQKDMVDHINKAL 242 >gi|323526379|ref|YP_004228532.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323383381|gb|ADX55472.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 260 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 37/255 (14%), Positives = 90/255 (35%), Gaps = 23/255 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F+ L + L + + ++ G++T F A G+ GFD Sbjct: 1 MKLRVFLGALAAVCLPLAASADTGKT---------IRFGVDTSYPPFEAKSARGELIGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + + +K ++ + AL++++ D + N+ T + S + F Sbjct: 52 IDLGNAICAKL---NAKCMWVENSFDGMIPALEARKFDAI--NSSMTKSEQRSKAIDFSN 106 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + ++ + + L G + VQ G+T E ++ + + ++ Sbjct: 107 KLYSPVEALVVKGGSPLAPTAESLHGKRVGVQQGSTQEAYARKHWGSKG--VEVVPYQTQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233 +++ R DA L + ++ K ++ + +G Sbjct: 165 DQVWNDLVTGRIDAALAFAPQAEGGFLKTPQGRDYGFARGPAIKDDSIFGPGVSIGVRKG 224 Query: 234 DTEWYNIVSWTHYAM 248 D + ++ ++ Sbjct: 225 DKALLDAINSAIDSI 239 >gi|317492652|ref|ZP_07951079.1| lysine-arginine-ornithine-binding periplasmic protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919402|gb|EFV40734.1| lysine-arginine-ornithine-binding periplasmic protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 260 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 94/279 (33%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L ++ +S L+ G + F+ G GFD Sbjct: 1 MKKQVLAVSLVLAMVGSSSVFAAVP--------DHLRVGTDPTYAPFSSKNPQGQLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + L I ++ ++ + +L++K+ID + + T R+ + F Sbjct: 53 IDLAKELCKRI---NTQCTFVESDFDALIPSLKAKKIDTIISSLSITEKRQKEIA--FTE 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K I ++ L G + V G+T E +++ + + ++ Sbjct: 108 KLYAADSRLVAAKGSPIQPTLESLKGKHVGVLQGSTQETYANQHWRPQGVD--VVPYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I A A R DA D A L ++ + + + + + D Sbjct: 166 DLIYADLAAGRIDAAFQDEVAASEGFLKQPVGKDYAFAGPSVKDNAIFGVGTGMGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 + A+ A + ++ +K + +V Sbjct: 226 ADLKV-------ALDKAFDSMRKDGTYDKFAKKYFDFNV 257 >gi|110668634|ref|YP_658445.1| ABC-type glutamine/glutamate/polar amino acids transport system, substrate-binding protein [Haloquadratum walsbyi DSM 16790] gi|109626381|emb|CAJ52840.1| ABC-type glutamine/glutamate/polar amino acids transport system, substrate-binding protein [Haloquadratum walsbyi DSM 16790] Length = 300 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 16/222 (7%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 + G + F +G+ GFDVD +A+ ++ P + +L + Sbjct: 64 VVIGSDIPYRPFEYETTSGELTGFDVDIAQAVFEDQLG--VNYEFKPTSFDSIIPSLNNG 121 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 I+ R+ + F + Q I+ ISS L G + VQ GTT Sbjct: 122 NFRIIMSAMTINDTRDE--KVDFSDPYFTAYQTIIVRADSSISSRGDLEGTVVGVQKGTT 179 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR----- 210 + + ++++ A + + A D + D Sbjct: 180 GANAAEELQSDFDGNIELNRYDQIPAAFQALKNGQVSAVINDNTVNAEFASQEDNIEFIE 239 Query: 211 -------PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + ++ A + D+E+ V Sbjct: 240 GEGAAVEAGQDAPPYLTLTVENYGIAFREDDSEFLERVDEAL 281 >gi|331676648|ref|ZP_08377344.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli H591] gi|331075337|gb|EGI46635.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli H591] Length = 260 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 18 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S ++F Sbjct: 65 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITSER--SKQVSFTT 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 120 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P V + L A+ + Sbjct: 175 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 232 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 233 LLEKLNNALAAI 244 >gi|288905591|ref|YP_003430813.1| amino acid transporter, amino acid-binding protein [Streptococcus gallolyticus UCN34] gi|288732317|emb|CBI13887.1| putative amino acid transporter, amino acid-binding protein [Streptococcus gallolyticus UCN34] Length = 279 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 83/266 (31%), Gaps = 20/266 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG------DIKKRGFLKCGINTGLVGFAE---VK 51 M L +++ S S DIK +G L +N F V Sbjct: 1 MKVSKLFGGLAVVVASLFLLSACGSSSSEDTSVSDIKDKGTLVVALNPEFAPFEFKTLVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G DV+ +A++ + D +++ ++ +LQS + DI T R+ Sbjct: 61 GKDTIVGADVEIAKAIAEELGVD---VKFSSMSFNNVLASLQSGKADIAISGISATEERK 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F Y ++ K + L G S+ Q G+ E ++ Sbjct: 118 K--AYDFSDPYYEAENVVLIRKTDIDKYTDTDSLDGLSVGTQKGSIQETVASEQL----T 171 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + E+ + + +A + N + I A A Sbjct: 172 GAKVVSLTQNSEMINELKNSQIEAVVLEKPIAEGYVANNSDLTISDITLTSDDADAYAVA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255 + +G T+ V+ + + ++ Sbjct: 232 LPKGSTKLTKKVNKVIKELKESGKID 257 >gi|206968146|ref|ZP_03229102.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH1134] gi|206737066|gb|EDZ54213.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH1134] Length = 264 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 85/253 (33%), Gaps = 18/253 (7%) Query: 1 MYKDFFVSILCLII---LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + + + + + S +S ++ + ++ F + +G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESSTTSTNGEK-EFRYAMSGLYKPFNYKENDGKLV 59 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDV+ AL+ + + + + LQ+K+ D++ + T R ++ Sbjct: 60 GFDVEIGEALAKKMNMKATPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVS 114 Query: 118 FRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y G F+ K ISS L G I V +T + +A + Sbjct: 115 FSNPYYRSGAQIFVAKKNNAISSPEDLKGKKIGVVKASTFKNLVA------KYTDQITEY 168 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + R DA D + L++ + S ++ + AI + D E Sbjct: 169 DSDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKE 226 Query: 237 WYNIVSWTHYAMV 249 V+ ++ Sbjct: 227 MVEKVNKALDEII 239 >gi|77456603|ref|YP_346108.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77380606|gb|ABA72119.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 265 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 90/250 (36%), Gaps = 15/250 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + + A + D KRG LK G++ + F G+ GF+ Sbjct: 1 MKK-YLSMLLVGVTALVAVNAAQAGAIDDAVKRGSLKVGMDPTYMPFEMTNKRGEIIGFE 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ A+ ++ + AL + + D++ T R +L L F Sbjct: 60 VDILKAMTKAMGVK---LELVSTGYDGIIPALMTDKFDMIGSGMTLTQER--NLRLNFSE 114 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K+ I S L+ I + GTT E+ + Sbjct: 115 PFIVVGQTLLIRKELEGTIKSYKDLNTADYRITSKLGTTGEMVAKKLISKAKYHG----Y 170 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +E + DA+ D V L + PLA + +GD + Sbjct: 171 DNEQEAVLDVVNGKADAFIYDAPYNVVAVNKVGAGK-LVFLDKPFTYEPLAFGLKKGDYD 229 Query: 237 WYNIVSWTHY 246 N ++ + Sbjct: 230 SLNFINNFLH 239 >gi|306829759|ref|ZP_07462948.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Streptococcus mitis ATCC 6249] gi|304428110|gb|EFM31201.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Streptococcus mitis ATCC 6249] Length = 271 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 79/254 (31%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K L + + ++ + IK++G L + F V Sbjct: 4 KKWILAVCSMLASMILVACQSSTDSSQSAVDAIKQKGKLVVATSPDYAPFEFQALVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAIAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y + F++ K +S L+ A+I Q GT E + + Sbjct: 120 -FDFSIPYYENKMSFLVRKADLDKYKDLSSLASANIAAQKGTVPETMVKEQLP----NAQ 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E +A + DA D + N + + A AI + Sbjct: 175 LTSLTNMGEAVNELQAGKVDAVHMDEPVALSYAGKNSDIVVASVNLTMKDGEANAVAIKK 234 Query: 233 GDTEWYNIVSWTHY 246 ++ +V Sbjct: 235 DQSDLKAVVDKVIQ 248 >gi|228906127|ref|ZP_04070016.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis IBL 200] gi|228853536|gb|EEM98304.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis IBL 200] Length = 264 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + + + + LQ+K+ D++ + T R ++F Sbjct: 61 FDVEIGEALAKKMNMKATPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVSF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTAISSPEDLKGKKIGVVKASTFKNLVA------KYTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|110633915|ref|YP_674123.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1] gi|110284899|gb|ABG62958.1| amino acid ABC transporter substrate-binding protein, PAAT family [Chelativorans sp. BNC1] Length = 261 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 80/227 (35%), Gaps = 17/227 (7%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 ++R LK G F + A+G+ +GFD+D RAL + + +++ Sbjct: 24 QAQERMQLKIGTEGAYPPFNNLTADGNLEGFDIDIARALCEEMNAE---CEFVTQEWDGM 80 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGA 146 ALQ+ + D + + T R+ + F Y ++ K I + L+G Sbjct: 81 IPALQAGKFDAIIASMSITDERK--QQVDFTEKYYNTPPAIVVAKDSDIAGVTKEDLAGR 138 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 +I QA TT F+ ++ EE R DA D+ L Sbjct: 139 TIGAQASTTHGNFAEATFQE----SEVKLYPTAEEYKLDMTNGRLDAVVDDVIVLQDWLS 194 Query: 207 TNDRPSEHVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHYAM 248 T +L + + AI +G+ E + A+ Sbjct: 195 T-PDGECCKVLGTLTPVEEIYGEGIGIAIRKGEDELREKFNAAIQAI 240 >gi|55981140|ref|YP_144437.1| amino acid ABC transporter periplasmic amino acid-binding protein [Thermus thermophilus HB8] gi|55772553|dbj|BAD70994.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Thermus thermophilus HB8] Length = 254 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 76/223 (34%), Gaps = 11/223 (4%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +IK+ G ++ G F GF+VD A++ + P +++ + Sbjct: 24 EEIKRSGEIRIGTEGAFPPFNYFDERNQLTGFEVDLGNAIAERLGLKP---RWIAQSFDT 80 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 + L + D + + T R + F Y G + K + L G Sbjct: 81 LLIQLNQGRFDFVIASHGITEERAR--AVDFTNPHYCTGGVIVSRKGGP-RTAKDLPGKV 137 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + VQ GTT ++R + A R DA+ D + Sbjct: 138 VGVQVGTTYMEAAQKIPGIK----EVRTYQRDPDALQDLLAGRIDAWITDRFV-AKEAIK 192 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + + + +++ + +A A+ +G+ + ++ ++ Sbjct: 193 ERKLENTLQVGELVFQERVAMAVAKGNKGLLDALNRALAELMQ 235 >gi|294814954|ref|ZP_06773597.1| secreted protein [Streptomyces clavuligerus ATCC 27064] gi|326443325|ref|ZP_08218059.1| secreted protein [Streptomyces clavuligerus ATCC 27064] gi|294327553|gb|EFG09196.1| secreted protein [Streptomyces clavuligerus ATCC 27064] Length = 329 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 79/242 (32%), Gaps = 18/242 (7%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I+ +G ++ G + +G G D D AL + ++ Sbjct: 70 QAIRDKGVVRVGSDIAYPPVEFKDDSGATTGIDPDIAAALGKELGVK---FEFQNGTFDT 126 Query: 88 RFLALQSKQIDILSRNTDWTLLR----------EISLGLAFRPITYFDGQGFIMH--KKK 135 L+SK+ DI T R ++ G+ F + G K + Sbjct: 127 LITGLRSKRYDIAMSAMTDTKDRQNGVDSETGKKVGEGVDFVD-YFTAGVSIYTPKGKDQ 185 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI--VFERVEEIDAAYRAHRCDA 193 GI + + L G I VQ GT +E K K F+ E RA DA Sbjct: 186 GIKTWADLCGKKIAVQRGTVSEDLAKAENKKCGDKGPIKIEAFDNDLEAQTRLRAGGADA 245 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D + + ++ + + +P A + +T+ + V A++ E Sbjct: 246 GSADFPVAAYAVQKSGGGKDFQLVGEQVEAAPYGIAFAKDNTQLRDAVKAALDAIIKNGE 305 Query: 254 LG 255 Sbjct: 306 YQ 307 >gi|242239703|ref|YP_002987884.1| cationic amino acid ABC transporter periplasmic protein [Dickeya dadantii Ech703] gi|242131760|gb|ACS86062.1| cationic amino acid ABC transporter, periplasmic binding protein [Dickeya dadantii Ech703] Length = 243 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 82/252 (32%), Gaps = 25/252 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + + ++ L+ F V A+ GFD Sbjct: 1 MKKIILAALLAGLSVSASA-------------TDTLRFATEASYPPFESVDASNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL I + + L+ ++ D + D T R ++F Sbjct: 48 IDLANALCKQI---QATCTFSNQAFDSLIPGLKFRRFDAVIAGMDITPER--QQQVSFTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K I++V+ LSG + VQ GTT + L D K + ++ + Sbjct: 103 PYYENSAMFIAQK-DKIANVAALSGKRVGVQNGTTHQKFLLDKHK----DITVVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + L A+ Q + E Sbjct: 158 NAVLDLKNGRLDAVFGDTAVVNEWLKQNQGLAAVGDKVADKDYFGIGLGIAVRQNNDELV 217 Query: 239 NIVSWTHYAMVT 250 + + Sbjct: 218 KKFNAALNTIKQ 229 >gi|238753777|ref|ZP_04615138.1| Histidine-binding periplasmic protein of high-affinity histidine transport system [Yersinia ruckeri ATCC 29473] gi|238708013|gb|EEQ00370.1| Histidine-binding periplasmic protein of high-affinity histidine transport system [Yersinia ruckeri ATCC 29473] Length = 259 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 102/279 (36%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +++ T+ S A++ LK G + F+ A+G+ GFD Sbjct: 1 MKKQIL--AISMVLALATASSAFAAVP------KTLKVGTDPTYAPFSSKNASGELVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + L + I +K ++ + +L++K+ID + + T R+ + F Sbjct: 53 IDLAKELCNRI---DTKCTFVDSDFDALIPSLKAKKIDAIIASLSITEKRQKEIA--FTD 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I +++ L+G I V G+T E ++ + + ++ Sbjct: 108 KLYAANSRLIAQKSSTIQPTLASLAGKRIGVLQGSTQEAFANALWQPKGVD--VVAYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I A + R DA D A L ++ + + + D Sbjct: 166 DLIYADLASGRIDAAFQDEVAASEGFLKQQGGKDYAFAGPSVKDDKYFGVGTGMGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE A+ A ++++K + ++ Sbjct: 226 TELKA-------ALDKAFAEMRKDGTYDKLAKKYFDFNI 257 >gi|227823793|ref|YP_002827766.1| putative extracellular solute-binding protein, family 3 [Sinorhizobium fredii NGR234] gi|227342795|gb|ACP27013.1| putative extracellular solute-binding protein, family 3 [Sinorhizobium fredii NGR234] Length = 309 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 77/253 (30%), Gaps = 14/253 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L+ L + + S L ++K G LK G F ANG GFD Sbjct: 53 MKLLPTLFAAALVQLAAFAPAEAGSNLDEVKSAGVLKIGTEGTYAPFTYHDANGALVGFD 112 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A++ + +L L + + D + T R+ F Sbjct: 113 VEIGEAVAKRLGVKAE---FLEGKWDGLIAGLDANRYDTVINQVGITEERKK--KYDFSE 167 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ + I + L G Q+ T+ LA+ A + + Sbjct: 168 PYIASKAVLIVKGDNEEIKDFADLKGKKSA-QSLTSNFGKLAEASGA-----ELVGTDGF 221 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ R DA D + K I + + + + E Sbjct: 222 DQSIQLVLTGRADATINDSLSFLDFKKQKPNA-NVRIAAEKPDADYSGIILRKDEPELLA 280 Query: 240 IVSWTHYAMVTAE 252 ++ A + A+ Sbjct: 281 AINKAL-AEIKAD 292 >gi|170749711|ref|YP_001755971.1| extracellular solute-binding protein [Methylobacterium radiotolerans JCM 2831] gi|170656233|gb|ACB25288.1| extracellular solute-binding protein family 3 [Methylobacterium radiotolerans JCM 2831] Length = 280 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 83/247 (33%), Gaps = 9/247 (3%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++ L + + A + IKKRG L G+ F +G G + D Sbjct: 14 LSALAALSTVALPGRAAAADGVDAIKKRGTLIVGVKADYKPFGFRDPSGTIIGLEPDLAA 73 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 L+ + + + + R LQ ++D+L R + Sbjct: 74 DLAKRLGVKLELVPVV---SANRIEFLQQGKVDLLIATLSDKPERRRVVQAIDPNYYSDF 130 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + K GI+ +QL G +C +G +A + A + F+ E+ A Sbjct: 131 VNVLL-PKSSGITDWAQLKGKPLCATSGAWYNKDVARTYGA-----EIVAFDGSEKPLFA 184 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + C Y D S L L +D + + + I +P A+ QG+T V Sbjct: 185 LKQGNCIGYVYDQSMLQGKLLDDDWKANYALPLKGILDAPWMMAVAQGNTTLQAAVEDAT 244 Query: 246 YAMVTAE 252 + Sbjct: 245 KDWMKTG 251 >gi|238920409|ref|YP_002933924.1| arginine-binding periplasmic protein 1 [Edwardsiella ictaluri 93-146] gi|238869978|gb|ACR69689.1| arginine-binding periplasmic protein 1 [Edwardsiella ictaluri 93-146] Length = 243 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 85/248 (34%), Gaps = 25/248 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +IL I + T+ ++ F + A +GFD Sbjct: 1 MKKIIIAAILTGISVSATAAQ-------------TIRFAAEASYPPFEFMDAQNKMQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + + + + +L+ K+ID + + D T R+ + F Sbjct: 48 VDLANAICQQM---KATCTFSNQSFDSLIPSLRFKRIDAVISSMDITPERQK--QVDFSQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K ++ V+ L G + +Q GTT + L D P+ ++ + Sbjct: 103 PYYDNSALFIAEKG-KVADVAALKGKRVGIQNGTTHQKYLMDKHPE----LTPVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N P + + L A+ +G+ Sbjct: 158 NAILDLKNGRIDAVFGDTAVVNEWMKQNPNLAPVGTKVTDADYFGTGLGIAVRKGNGPLL 217 Query: 239 NIVSWTHY 246 + Sbjct: 218 EQFNAALN 225 >gi|212705000|ref|ZP_03313128.1| hypothetical protein DESPIG_03068 [Desulfovibrio piger ATCC 29098] gi|212671552|gb|EEB32035.1| hypothetical protein DESPIG_03068 [Desulfovibrio piger ATCC 29098] Length = 246 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 83/253 (32%), Gaps = 23/253 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M++ +++ L+++ + L N + G+ Sbjct: 1 MFRKLTLTLCALVLMCTPVAA------------KTLVVAGNCAFPPMEFLTDKKVPTGYS 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D+ ++ KI + + F L + DIL+ +T T R F Sbjct: 49 IDYIHEIAKRAG---LKITFRDVAWDGIFAGLAAGNYDILASSTTITPER--QQAFDFTI 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y Q +M K K I+S++ L G ++ Q G T L + N+ ++ + Sbjct: 104 PYYGAVQAVVMPKGKKINSLADLKGLTVGSQIGITGVFVL----RKANVGAKIKEYDDIG 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYN 239 A R DA D + + + + + +G+TE Sbjct: 160 LAFEDLAAGRTDAVICDDPVAKFYANKREDFAGKFSVAYLHKDPEYYGFCLRKGETELLE 219 Query: 240 IVSWTHYAMVTAE 252 ++ A + A+ Sbjct: 220 RLNKAI-ASMQAD 231 >gi|769794|emb|CAA60105.1| artJ [Escherichia coli K-12] Length = 243 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S ++F Sbjct: 48 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKCIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P V + L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNNALAAI 227 >gi|227327918|ref|ZP_03831942.1| putative cystine-binding periplasmic protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 255 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 71/246 (28%), Gaps = 15/246 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F L L TS +A L IK G +K G + +G GFD Sbjct: 1 MKKIRF--ALLTSALLATSVFAHADDLSAIKSAGVIKIGTEGTYAPYTYHDKSGQLVGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RA++ + I+ + +K+ D + T R+ F Sbjct: 59 VDIGRAVAEKLGVKAQFIEGR---WDGLIAGIDAKRYDAVINQVGVTKERQA--KYDFSK 113 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ I S L G Q+ T+ A + A + + Sbjct: 114 PYIDSKAVLVVRGDNTTIKDFSDLKGKKSA-QSLTSNYSKQATSYGA-----EIVPTDGF 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R DA D + K I P A + + Sbjct: 168 NQSLDLVLSGRADATLNDNLSFLDFKKQKPDA-NVKIAATSKDGEPSAILVRKDQAPLVE 226 Query: 240 IVSWTH 245 ++ Sbjct: 227 ALNKAL 232 >gi|55823399|ref|YP_141840.1| ABC transporter substrate-binding protein, amino acid [Streptococcus thermophilus CNRZ1066] gi|55739384|gb|AAV63025.1| ABC transporter substrate-binding protein, amino acid [Streptococcus thermophilus CNRZ1066] Length = 265 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 36/261 (13%), Positives = 76/261 (29%), Gaps = 15/261 (5%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K F ++ L + IK+ + + L F V Sbjct: 1 MKKFWFMLTALVATCFLVACRGSQGVSTKTIKENKKIVLATESELAPFEFKSLVNGKDTL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+ + +++ ++ ++QS + DI T R+ Sbjct: 61 VGADIELAKAIGKKLGVK---VEFSVMSFDNVLASVQSGKADIAIAGISVTDERKKV--Y 115 Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K +S L+ ++ Q G+ E F + Sbjct: 116 DFSDSYYTSENVVIVKKDKVNDFTSADSLAKQTVGTQKGSVQETVAKKQFSKA----SVV 171 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E+ ++ + A + + ND + A AI +G Sbjct: 172 SLASNGEMINELKSGQIQAVVLEKAIAEGYIAQNDDLTLASFNLKSDGSDAYAVAIRKGS 231 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + ++ + + Sbjct: 232 DDLLKEINAVIKETKVSGKFD 252 >gi|75759591|ref|ZP_00739678.1| Cystine-binding protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218895476|ref|YP_002443887.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus G9842] gi|228899077|ref|ZP_04063349.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis IBL 4222] gi|74492926|gb|EAO56055.1| Cystine-binding protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218542572|gb|ACK94966.1| putative amino acid ABC transporter, amino acid-binding protein [Bacillus cereus G9842] gi|228860518|gb|EEN04906.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis IBL 4222] Length = 264 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + + + + LQ+K+ D++ + T R ++F Sbjct: 61 FDVEIGEALAKKMNMKATPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVSF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTAISSPEDLKGKKIGVVKASTFKNLVA------KYTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + + E Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDNKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|302538271|ref|ZP_07290613.1| glutamate binding periplasmic protein [Streptomyces sp. C] gi|302447166|gb|EFL18982.1| glutamate binding periplasmic protein [Streptomyces sp. C] Length = 270 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 89/251 (35%), Gaps = 11/251 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ +I L T+ + + GI G + +G + GFD Sbjct: 1 MKVPKAGAVATVIALAATASGCGGEAPKE-----PISIGIKFDQPGIGMREPDGTFTGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + ++I++ + + +R L +Q ++ ++ + R + F Sbjct: 56 VDVATYIAKELGYKANEIEFKQVYSSDRELLIQYNEVKFVAASYTINDKR--REKVEFAG 113 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ I+ L+ +C +G+T+ + K + Sbjct: 114 PYFVAHQDLMIRADDNSITKAEDLNNKRLCTVSGSTSAENIRKNLA---PKASVLELGGY 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A R + DA T D S L + + +L +S + +GD + Sbjct: 171 SECLVAIRDNTADAMTTDNSILAGYAARKENAGKFKLLGLNMSNENYGIGLKKGDNDLQR 230 Query: 240 IVSWTHYAMVT 250 ++ MV+ Sbjct: 231 KINTAITKMVS 241 >gi|82776110|ref|YP_402457.1| glutamine ABC transporter periplasmic protein [Shigella dysenteriae Sd197] gi|309786522|ref|ZP_07681145.1| glutamine-binding periplasmic protein [Shigella dysenteriae 1617] gi|81240258|gb|ABB60968.1| periplasmic glutamine-binding protein [Shigella dysenteriae Sd197] gi|308925585|gb|EFP71069.1| glutamine-binding periplasmic protein [Shigella dysenteriae 1617] Length = 248 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 86/247 (34%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M VS+ L + F S + L +T V F + + + GFD Sbjct: 1 MKSVLKVSLAALTLAFAVSSHA----VDK-----KLVVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 51 VDLWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSD 105 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ + SV L G + V++GT + DY KA+ F + Sbjct: 106 GYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + +R DA D + T S+ + D + A +G E + Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGN-SQFKAVGDSLEAQQYGIAFPKGSDELRD 220 Query: 240 IVSWTHY 246 V+ Sbjct: 221 KVNGALK 227 >gi|308186225|ref|YP_003930356.1| Arginine-binding periplasmic protein precursor [Pantoea vagans C9-1] gi|308056735|gb|ADO08907.1| Arginine-binding periplasmic protein precursor [Pantoea vagans C9-1] Length = 243 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 83/247 (33%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L L T+ ++ F V A+ +GFD Sbjct: 1 MKKMVLAALLAGFSLSATAAQ-------------TIRFATEASYPPFEFVDADNKIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + F Sbjct: 48 VDLANALCKEI---DATCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPDREK--QVLFTK 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ K ++SV L G + VQ GTT + LAD + + ++ + Sbjct: 103 PYYDNSALFVAQKG-KVASVEALKGKRVGVQNGTTHQKYLAD----KHSDITIVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + + L A+ G+T+ Sbjct: 158 NAVLDLKNGRIDAVFGDTAVVNEWLKQNAALAAVGDKVTDKAYFGTGLGIAVRTGNTDLQ 217 Query: 239 NIVSWTH 245 + Sbjct: 218 TKFNGAL 224 >gi|269797856|ref|YP_003311756.1| extracellular solute-binding protein family 3 [Veillonella parvula DSM 2008] gi|269094485|gb|ACZ24476.1| extracellular solute-binding protein family 3 [Veillonella parvula DSM 2008] Length = 268 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 77/258 (29%), Gaps = 22/258 (8%) Query: 2 YKDFFVS--ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKG 58 K ++ L S+N L G N V F + G Sbjct: 7 KKIILGGCMLVMAASLVGGCGSSNQPT------SNKLIVGTNATFVPFEFKDEKTQDYTG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD++ RA+ I D ++ + AL + ID+ + T R S + F Sbjct: 61 FDIELIRAIGKRINKD---VELKNVAFDALIPALNTHDIDVAASGMTITKAR--SEKVLF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + + ++S+ L G I Q GTT F+ Sbjct: 116 SSPYYENALAVVYKDGTAVNSLDDLKGKKIAAQLGTTGADLAHKI-----EGTTVKEFDH 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEW 237 E + DA D+ A + P +H + +K L AI + + Sbjct: 171 SNEALLELQNGGVDATVIDLP--VAQYYSTKHPDQHIKFMAYPNTKEYLGLAINKDNKAL 228 Query: 238 YNIVSWTHYAMVTAEELG 255 ++ M E Sbjct: 229 QEEINKAIADMKADGEFN 246 >gi|27382317|ref|NP_773846.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] gi|27355488|dbj|BAC52471.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 275 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 81/261 (31%), Gaps = 15/261 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M + L L L + + A + +IK+ G LK +N+ + G Sbjct: 1 MTR--LSHFLSLAALAAVTSAQAAELPAEIKQAGALKLTVNSTYAPMEYRDPATNELVGL 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D L+ + KI + E +LQ+K+ D + R F Sbjct: 59 DIDLANELAKRLGG--LKIVWSETPFAELIPSLQTKRADFIISGISDRASR--RETADFV 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-----NMKYHPI 174 G F + + + L G + T+ + + + K + + Sbjct: 115 D-YLQTGPQFFVMADSEAKAATDLCGKKVGTTRSTSFPVEIEKWSKQNCEAAGKPAIQYV 173 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E ++ + R DA L P ++ I+ + +K + D Sbjct: 174 PGENSIDVRNQLKQGRIDAAVQGSETLP--YAQTQEPGKYRIVGEAFAKGYQGIMFRKDD 231 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 +V+ AM+ Sbjct: 232 AALREVVTEKLTAMIADGAYK 252 >gi|156934694|ref|YP_001438610.1| glutamine ABC transporter periplasmic protein [Cronobacter sakazakii ATCC BAA-894] gi|156532948|gb|ABU77774.1| hypothetical protein ESA_02529 [Cronobacter sakazakii ATCC BAA-894] Length = 262 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 85/249 (34%), Gaps = 21/249 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F L + L F S A L +T V F + + + GFDVD Sbjct: 17 KSVFKVSLAALTLAFAVSSQAAD---------KLVVATDTAFVPFEFKQGD-KYVGFDVD 66 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 67 LWAAIAKELKLDY---TLKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 121 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 122 YNSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 177 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + D ++ A +G E V Sbjct: 178 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLAGQQYGIAFPKGSDELRTKV 236 Query: 242 SWTHYAMVT 250 + + Sbjct: 237 NGALKTLKE 245 >gi|191166156|ref|ZP_03027990.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli B7A] gi|190903765|gb|EDV63480.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli B7A] Length = 243 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 80/252 (31%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R ++F Sbjct: 48 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPERRK--QVSFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P V + L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNNALAAI 227 >gi|161614845|ref|YP_001588810.1| hypothetical protein SPAB_02598 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194444543|ref|YP_002040128.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197248178|ref|YP_002145843.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|161364209|gb|ABX67977.1| hypothetical protein SPAB_02598 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194403206|gb|ACF63428.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197211881|gb|ACH49278.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|326622607|gb|EGE28952.1| Bacterial extracellular solute-binding protein, family 3 [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627182|gb|EGE33525.1| Bacterial extracellular solute-binding protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 245 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 83/247 (33%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 3 MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + F Sbjct: 50 VDLANALCKEI---DASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + ++ + Sbjct: 105 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 160 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 219 Query: 239 NIVSWTH 245 + Sbjct: 220 QKFNTAL 226 >gi|325273128|ref|ZP_08139425.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas sp. TJI-51] gi|324101733|gb|EGB99282.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas sp. TJI-51] Length = 250 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 86/252 (34%), Gaps = 22/252 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 YK F ++ +++ + + L+ GI F A+G+ GFD Sbjct: 4 YKKFLLAAAATLVMSANAMAAE-----------KLRMGIEAAYPPFNNKDASGNVVGFDK 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D AL + + + + + AL +K+ D L + T R+ + F Sbjct: 53 DIGDALCAKMKVE---CSVVTSDWDGIIPALNAKKFDFLVSSLSITDERK--QAVDFTDP 107 Query: 122 TYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K + L G I Q T L D + +++ E Sbjct: 108 YYSNKLQFIAPKNVDFKTDKASLKGKVIGTQRATLAGTYLED----NYPGVDVKLYDTQE 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + R D D Y + D + ++ + A+ +GDT+ + Sbjct: 164 NAYLDLVSGRIDGILADKYVQYEWLKSKDGSNFEFKGEPVMDSDKIGIAVRKGDTQLRDN 223 Query: 241 VSWTHYAMVTAE 252 ++ A + A+ Sbjct: 224 LNKAL-AEIKAD 234 >gi|295096505|emb|CBK85595.1| L-glutamine-binding protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 247 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 83/249 (33%), Gaps = 21/249 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSVLKVSLAALTLAFAVTSQAAD---------KLVVATDTAFVPFEFKQGD-KYVGFDVD 51 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 52 LWAAVAKELKLDY---TLKPMDFSGIIPALQTKNVDLALAGITITEERKK--AIDFSDGY 106 Query: 123 YFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 107 YKSGLLVMVKADNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 162 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + D + A +G + N V Sbjct: 163 AYMELGTNRADAVLHDTPNILYFIKTAGNGK-FKAVGDSLEAQQYGIAFPKGSDDLRNKV 221 Query: 242 SWTHYAMVT 250 + + Sbjct: 222 NGALKTLKE 230 >gi|293414141|ref|ZP_06656790.1| arginine ABC transporter [Escherichia coli B185] gi|291434199|gb|EFF07172.1| arginine ABC transporter [Escherichia coli B185] Length = 243 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 82/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S ++F Sbjct: 48 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + T P V + L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNNALAAI 227 >gi|167766389|ref|ZP_02438442.1| hypothetical protein CLOSS21_00894 [Clostridium sp. SS2/1] gi|167711798|gb|EDS22377.1| hypothetical protein CLOSS21_00894 [Clostridium sp. SS2/1] gi|291560832|emb|CBL39632.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SSC/2] Length = 268 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 82/255 (32%), Gaps = 16/255 (6%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K +++ + L D++ + L G+++ Sbjct: 1 MKKFLVGLLTVALAASMLVGCGKKEEKTKTDNSLKDVQSKKELVLGLDSSFPPMGFTDKK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFD+D + ++ + K++ P+N + L ++++D L ++ R Sbjct: 61 DNIVGFDIDLAKEVTKRMG---IKLKLQPINWNSKEQELNTEKVDCLWNGVTYSKARAKE 117 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + Q I+ I S+ ++ + +T AD K Sbjct: 118 MLC--SESYMDNHQVLIVPANSKIKSLKDITKDTEVGIQSGSTAADAADSVKELKNS-KI 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + +I DA D + A T ++ +L D ++K + Sbjct: 175 KLLADNVQILNDLGHG-LDAAVMDE--VVAKYYTKKDAGKYKVLEDSVAKEKYVIGFRKD 231 Query: 234 DTEWYNIVSWTHYAM 248 D N V AM Sbjct: 232 DKALCNEVVKQLKAM 246 >gi|16128828|ref|NP_415381.1| arginine binding protein, periplasmic [Escherichia coli str. K-12 substr. MG1655] gi|89107711|ref|AP_001491.1| arginine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|170080519|ref|YP_001729839.1| arginine ABC transporter periplasmic-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|238900119|ref|YP_002925915.1| arginine transporter subunit [Escherichia coli BW2952] gi|256023513|ref|ZP_05437378.1| arginine transporter subunit [Escherichia sp. 4_1_40B] gi|301027627|ref|ZP_07190947.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 196-1] gi|307137488|ref|ZP_07496844.1| arginine transporter subunit [Escherichia coli H736] gi|2507363|sp|P30860|ARTJ_ECOLI RecName: Full=ABC transporter arginine-binding protein 1; Flags: Precursor gi|1651393|dbj|BAA35574.1| arginine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|1787085|gb|AAC73947.1| arginine binding protein, periplasmic [Escherichia coli str. K-12 substr. MG1655] gi|169888354|gb|ACB02061.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|238860006|gb|ACR62004.1| arginine transporter subunit [Escherichia coli BW2952] gi|260449993|gb|ACX40415.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli DH1] gi|299879229|gb|EFI87440.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 196-1] gi|309701138|emb|CBJ00436.1| arginine ABC transporter, substrate-binding protein [Escherichia coli ETEC H10407] gi|315135509|dbj|BAJ42668.1| arginine transporter subunit [Escherichia coli DH1] gi|315619867|gb|EFV00386.1| arginine-binding periplasmic protein 2 [Escherichia coli 3431] gi|323937967|gb|EGB34229.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1520] gi|323969576|gb|EGB64864.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TA007] Length = 243 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 82/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S ++F Sbjct: 48 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + T P V + L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNNALAAI 227 >gi|94986085|ref|YP_605449.1| extracellular solute-binding protein [Deinococcus geothermalis DSM 11300] gi|94556366|gb|ABF46280.1| amino acid ABC transporter substrate-binding protein, PAAT family [Deinococcus geothermalis DSM 11300] Length = 253 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 75/214 (35%), Gaps = 14/214 (6%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G LK + F G GFDVD +A+++ + P ++ LQ Sbjct: 28 GVLKIAMEGTYPPFTYKDEQGQLSGFDVDIAKAVAAKLGLRPE---FVLTEWSGILGGLQ 84 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQ 151 + + D++ T R+ ++G F + I+ K + +++ L G + V Sbjct: 85 ANKYDVIVNQVGITPERQKTIG--FSRPYAYSSPQIIVRKGSSFNPKTLADLKGKRVGVG 142 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 G+ E L + + + E A A R DA D + L N+ P Sbjct: 143 LGSNFEQQLRQA-----GGINVVTYPGAPEYLADLAAGRLDAAYNDRLLVGYLITKNNLP 197 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 I P+ A + +T N ++ Sbjct: 198 I--KGAGVIGQPEPVGIAFKKTNTALGNAINRAL 229 >gi|319938932|ref|ZP_08013296.1| amino acid ABC transporter [Streptococcus anginosus 1_2_62CV] gi|319811982|gb|EFW08248.1| amino acid ABC transporter [Streptococcus anginosus 1_2_62CV] Length = 277 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 38/255 (14%), Positives = 80/255 (31%), Gaps = 14/255 (5%) Query: 1 MY-KDFFVSILCLI-ILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K + ++I LI L T+ S +++ + G + V + NG Sbjct: 1 MKIKRYVLAICSLISFLLLTACSNVNNPKVDNWSKYQQKKSITIGFDNTFVPMGFEQKNG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D A+ K+ + P++ + L + ID++ T R Sbjct: 61 QYVGFDIDLANAVFKEYG---IKVNWQPIDWDMKETELTNGTIDLIWNGYSATDERRK-- 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY---FKAHNMKY 171 + F + Q + K I+ + + + Q G++ + K + Sbjct: 116 KVQFTIPYMKNEQVLVAKKSSNIAKTADMKDKILGAQTGSSGYDEFEAHPELLKNLVKNH 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ E + R D D ++ + P A Sbjct: 176 KAAQYQSFTEALIDLQNSRIDGLLIDRVYANYYLKEEGILPDYYVFPAGFDSESFAVGAR 235 Query: 232 QGDTEWYNIVSWTHY 246 + D + ++ Sbjct: 236 KTDKQLVENINQAFK 250 >gi|269138891|ref|YP_003295592.1| amino-acid ABC transporter periplasmic component [Edwardsiella tarda EIB202] gi|267984552|gb|ACY84381.1| amino-acid ABC transporter periplasmic component [Edwardsiella tarda EIB202] gi|304558877|gb|ADM41541.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Edwardsiella tarda FL6-60] Length = 257 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 83/246 (33%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L L +L + + ++ L I+ G +K G + A+G GFD Sbjct: 1 MMKKTARALLALTLLSGGALAQSSDELAAIQSAGSIKFGTEGTYPPYTYHDASGKLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RA+++ + P ++ L +K+ D + T R+ F Sbjct: 61 VDIARAVAAKMGLKP---VFVEGRWDGLIAGLSAKRYDAVINQVGITPERQA--KFDFSD 115 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ + S L G Q+ T+ LA+++ A + + Sbjct: 116 PYVGAKAVLIVRSDNAQLKSFDDLRGQK-AAQSLTSNYAKLAEHYGA-----DLVPTDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R A D + + ++ ++ A + +G + Sbjct: 170 NQSLELVISGRAAATLNDNLSYLDFRQHKPNAP-LKVVAVADQRADSAILVRKGQPQLVA 228 Query: 240 IVSWTH 245 ++ Sbjct: 229 ALNRAL 234 >gi|54025807|ref|YP_120049.1| putative glutamate transporter glutamate-binding protein [Nocardia farcinica IFM 10152] gi|54017315|dbj|BAD58685.1| putative glutamate transporter glutamate-binding protein [Nocardia farcinica IFM 10152] Length = 277 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 83/235 (35%), Gaps = 10/235 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 S L ++ G L GI G +G + GFDV + ++ + P Sbjct: 23 CGGGDEGSALEHAQE-GKLTIGIKYDQPGLGLRTKDGAYTGFDVAVAQYVAGKLGVQPDG 81 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-G 136 I + + +R +++ Q+D + T R+ + F Y GQ ++ Sbjct: 82 ITFKEAPSAQRETLIENGQVDFVVATYSITDKRKE--KVDFAGPYYIAGQSLLVKADNTD 139 Query: 137 ISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+ V L+G +C G+T + D + F+ A R DA T Sbjct: 140 ITGVESLNGNKKLCSVKGSTPAQNVKDKYAQ---DVQLQEFDTYSLCVEALRNGSVDAVT 196 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 D L + P + ++ + + +GD E + ++ AM+ Sbjct: 197 TDDIILAGFAAQS--PGQLKVVGQPFTTENYGIGLKKGDQETRDKINDAIEAMIA 249 >gi|304405143|ref|ZP_07386803.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] gi|304346022|gb|EFM11856.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] Length = 495 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 55/308 (17%), Positives = 98/308 (31%), Gaps = 44/308 (14%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--------------LKCGINTGLVG 46 M K V IL L ++ F + G L G + Sbjct: 1 MKKSAIVRILALTLIVFILLGVFGPT-DRSRANGATSNASASFCPDGKALVMGTSPDYPP 59 Query: 47 FAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 + V A GD G D+D +A++S + ++ ++ ALQ+ ++D + Sbjct: 60 YENVDAKHGGDIVGLDIDIAKAITSKLGCK---LEISAMDFNGLIAALQTHRVDFVMSGM 116 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F Y + KKK +++ +L G + VQ G+T E +A Sbjct: 117 SVTPERKE--NVDFSNPYYAARNTIVSKKKKPFATLQELEGGKVGVQLGSTQETAIAGLK 174 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 A + + +A+R DA + + N ++P Sbjct: 175 NAK-----ITKLNTISSLIQELKANRIDAAIVEDAVAIGYIEANAD-LAFTMIPSDDDAE 228 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284 A A +G + A AE + + + G + + Sbjct: 229 GYAIAFPKG---------SSLVAPFNAELAELESS-------GEKQKMIDSWFGQHEGAK 272 Query: 285 IGEALGLT 292 G L L Sbjct: 273 KGNQLNLD 280 >gi|218688597|ref|YP_002396809.1| glutamine ABC transporter periplasmic protein [Escherichia coli ED1a] gi|331656832|ref|ZP_08357794.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli TA206] gi|218426161|emb|CAR06981.1| glutamine transporter subunit ; periplasmic binding component of ABC superfamily [Escherichia coli ED1a] gi|331055080|gb|EGI27089.1| glutamine-binding periplasmic protein (GlnBP) [Escherichia coli TA206] Length = 248 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 83/245 (33%), Gaps = 20/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 53 LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + D + A +G E + + Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKGSDELRDKI 222 Query: 242 SWTHY 246 + Sbjct: 223 NGALK 227 >gi|118476114|ref|YP_893265.1| amino acid ABC transporter periplasmic-binding protein [Bacillus thuringiensis str. Al Hakam] gi|118415339|gb|ABK83758.1| amino acid ABC transporter substrate-binding protein, PAAT family [Bacillus thuringiensis str. Al Hakam] Length = 264 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 80/252 (31%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLAG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + P+ I + L++K+ D + + T R + F Sbjct: 61 FDVEIGEALAKKMNMKPTPIT---NPWETLIQGLKAKKYDAILGSMAITEER--LKAVNF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKGKKIGVVKASTFKDLVA------KHTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 AEKVNKALDEII 239 >gi|226323072|ref|ZP_03798590.1| hypothetical protein COPCOM_00844 [Coprococcus comes ATCC 27758] gi|225208639|gb|EEG90993.1| hypothetical protein COPCOM_00844 [Coprococcus comes ATCC 27758] Length = 257 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 84/254 (33%), Gaps = 17/254 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG----FLKCGINTGLVGFAEVKANGDW 56 M K V + C + F + + + + L N F + + Sbjct: 3 MKKVISVVLACACVFSFAACGSKSDSSKSDSAKSDKKEKLVMATNAEFPPFEYYDGD-EV 61 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D +F A++ + D ++ + A+QS + DI + T + + + Sbjct: 62 VGIDAEFAAAIADKLGMD---LKIEDMAFDSIIPAVQSGKADIGAAGMTVTE--DRATQV 116 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y Q I+ I+ L G I VQ GTT ++ D F + F Sbjct: 117 DFSDSYYTGVQVIIVTDDSDITEPDDLKGKKIGVQQGTTGDIYSTDDFG----DDNVERF 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + E A + + DA D K + IL + A AI +G+ + Sbjct: 173 NKGMEAVQALQQGKIDAVIIDN---QPAKTFVEENEGLKILETSYVEEDYALAIKKGNDD 229 Query: 237 WYNIVSWTHYAMVT 250 V+ + Sbjct: 230 LVKKVNDAIKELKE 243 >gi|254386082|ref|ZP_05001396.1| glutamate binding periplasmic protein [Streptomyces sp. Mg1] gi|194344941|gb|EDX25907.1| glutamate binding periplasmic protein [Streptomyces sp. Mg1] Length = 279 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 35/236 (14%), Positives = 74/236 (31%), Gaps = 6/236 (2%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 ++ K+ + GI G +G + GFDVD ++ + P Sbjct: 20 ATACGGSSDKASDGGAKKDKVVIGIKFDQPGVGLKTPDGKFTGFDVDVATYVAKELGYTP 79 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +I++ + ER + + + + + R+ + F + Q ++ Sbjct: 80 EQIEFKQAISAERENLISNGDVKFVVASYSINDKRKE--KVDFAGPYFLAHQDLLVRSDD 137 Query: 136 G-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+ L+ +C G+T+ + + E + DA Sbjct: 138 NSITKPEDLNSKKLCSVTGSTSAQNIKTKLA---PEADLKQSAGYSECLTGLESKSMDAL 194 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 T D S L + ++ +S + +GD E ++ MV Sbjct: 195 TTDNSILAGYAAQEKNKGKFKLVGLNLSNENYGIGLKKGDKELQTKINAALKKMVA 250 >gi|323129194|gb|ADX16624.1| arginine-binding periplasmic protein 1precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 245 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 84/247 (34%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 3 MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + F Sbjct: 50 VDLANALCKEI---DASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + + ++ + Sbjct: 105 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKYPE----ITTVPYDSYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 160 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 219 Query: 239 NIVSWTH 245 + Sbjct: 220 QKFNTAL 226 >gi|295836167|ref|ZP_06823100.1| glutamate-binding protein [Streptomyces sp. SPB74] gi|197695263|gb|EDY42196.1| glutamate-binding protein [Streptomyces sp. SPB74] Length = 280 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 35/241 (14%), Positives = 75/241 (31%), Gaps = 11/241 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVKANGD 55 M + + +++ + S D + GI G + +G Sbjct: 1 MKFRKVSAAVAVVLTVGLAASACGKNDDDKASGGSGGGKKITIGIKFDQPGLGQKLPSGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFDVD ++ A+ ++I + + +R L+ +D ++ + T RE Sbjct: 61 FAGFDVDVATYVAKALGYKTNQIVWKEAKSADRETMLERGDVDFIAASYSITDEREA--K 118 Query: 116 LAFRPIT-YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F + +K I+ L+ +C G+T+ + Sbjct: 119 VDFAGPYLLAHQDVLVREDEKEINDPKDLNSRKLCSVTGSTSAQNIKKDLAPR---ADLQ 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E DA T D S L + + + ++ + +G Sbjct: 176 EYGGYSECLTGLENKAVDALTTDDSILAGYAAQKEFQGKFKLAGFKMTNENYGIGVKKGS 235 Query: 235 T 235 Sbjct: 236 D 236 >gi|15800615|ref|NP_286629.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 EDL933] gi|291281862|ref|YP_003498680.1| Arginine 3rd transport system periplasmic binding protein [Escherichia coli O55:H7 str. CB9615] gi|12513881|gb|AAG55239.1|AE005267_4 arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 str. EDL933] gi|209775328|gb|ACI85976.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli] gi|209775330|gb|ACI85977.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli] gi|209775332|gb|ACI85978.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli] gi|209775334|gb|ACI85979.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli] gi|209775336|gb|ACI85980.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli] gi|290761735|gb|ADD55696.1| Arginine 3rd transport system periplasmic binding protein [Escherichia coli O55:H7 str. CB9615] Length = 260 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 80/252 (31%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN GFD Sbjct: 18 MKKLVLAALLASCAFGASAAE-------------KINFGVSATYPPFESMDANNQIVGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T + S ++F Sbjct: 65 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITP--DRSKQVSFTT 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 120 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P V + L A+ + Sbjct: 175 NAFIDLKNSRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 232 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 233 LLEKLNNALAAI 244 >gi|299769347|ref|YP_003731373.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Acinetobacter sp. DR1] gi|298699435|gb|ADI90000.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Acinetobacter sp. DR1] Length = 261 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 83/256 (32%), Gaps = 22/256 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L L + + K ++ G + F +G GFD Sbjct: 5 MKKMFVSTTLVLAAVATNVQA---------KDWKVIRFGTESSYAPFEYKTPDGKLTGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + + +K ++ + AL++K+ D + + T R + F Sbjct: 56 VDLGNAICAKL---KAKCVWVENSFDGMIPALKAKKFDGILSSMTVTDERAK--QILFSS 110 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K + + + L G + VQ GT E Y+ + + Sbjct: 111 KIYNTPTRMVAKKGSPLLPTAASLKGKRVGVQQGTIQETYAKTYWATKG--VTVVPYPVQ 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + R DA D + L + + + + A + + D Sbjct: 169 DLIYQDMMSGRLDATLQDAIMVDGAFLKQPKGKNFTFVGSNVVDAKTLGVGAAIGLRKED 228 Query: 235 TEWYNIVSWTHYAMVT 250 + + A++ Sbjct: 229 ADLKANIDKALAAIIA 244 >gi|296101732|ref|YP_003611878.1| cystine transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056191|gb|ADF60929.1| cystine transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 266 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 84/254 (33%), Gaps = 20/254 (7%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M V + L+ ++L +K+RG L G+ F+ + Sbjct: 1 MKLALLGRQALMGVMAVALVAGMSVKTFAAENLLNKVKERGTLLVGLEGTYPPFSFQGDD 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+V+F L+ + P +L SK+ID++ + R+ Sbjct: 61 GKLTGFEVEFAEELAKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I + + L G + V GT E ++ + + Sbjct: 117 -KYDFSTPYTVSGIQALVKKGNEGSIKTAADLKGKKVGVGLGTNYE----EWLRQNVQGV 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + + D S+ A+ Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTNNTLAVAGDAFSRQESGVAVR 229 Query: 232 QGDTEWYNIVSWTH 245 +G+ + + Sbjct: 230 KGNEDLVKAIDSAI 243 >gi|268590211|ref|ZP_06124432.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Providencia rettgeri DSM 1131] gi|291314492|gb|EFE54945.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Providencia rettgeri DSM 1131] Length = 247 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 84/249 (33%), Gaps = 25/249 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + L T+ ++ ++ F N GFD Sbjct: 1 MKKIILAALLGAVTLSATAA-----------EKETIRFATEATYAPFEMFDKNNQIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + + + + +L+ ++ + L D T R + F Sbjct: 50 VDLANAMCEKM---NATCTFTHQSFDSLIPSLKFRRFEALMAGIDITPER--QQQVDFTE 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K+ ISSV QL I VQ GTT + + + K + ++ + Sbjct: 105 TYYPNSAEFIAVKE-KISSVDQLKDKKIGVQNGTTHQKYIMEQHK----GMTTVPYDNYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R DA GD + + + + L A+ +G+ E Sbjct: 160 SAILDLQNGRIDAVFGDTAVADEWLKAKGNENLAAVGEKVTDPQYFGIGLGIAVRKGNKE 219 Query: 237 WYNIVSWTH 245 + ++ Sbjct: 220 LLDKMNKAL 228 >gi|193069411|ref|ZP_03050366.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli E110019] gi|192957364|gb|EDV87812.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Escherichia coli E110019] Length = 248 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 83/245 (33%), Gaps = 20/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 53 LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + + + + D + A +G E + V Sbjct: 164 AYMELGTNRADAVLHDTPNIL-YFIKTAGSGQFKAVGDSLEAQQYGIAFPKGSDELRDKV 222 Query: 242 SWTHY 246 + Sbjct: 223 NGALK 227 >gi|228476953|ref|ZP_04061593.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] gi|228251372|gb|EEK10533.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] Length = 224 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 19/223 (8%) Query: 2 YKDF----FVSILCLIILFFTSFSTNA---------SILGDIKKRGFLKCGINTGLVGFA 48 K S+ L I TS T A + I KRG L G+ + F Sbjct: 4 KKILRYLTVASLAILTIFLITSHKTKAEDTSKLLDSKAVQKIVKRGTLNVGVKQDVPNFG 63 Query: 49 EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 A ++G +VD + ++ + K+ Y+P+ + R + + ID+L Sbjct: 64 YYSAKTNTYEGMEVDLAKKIADEL---KVKVNYIPVTTQTREPLMDNGTIDLLIATYTIN 120 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ S + Y+D GF++ K GI+ +S L+G +I V G +T+ L +Y A+ Sbjct: 121 DERKASYAI--STPYYYDQIGFLVLKDSGINKISDLNGKTIGVSQGASTKAALQEYASAN 178 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 N+K++ + E+ + AHR DA++ D S L + + Sbjct: 179 NLKFNYVQLGSFPELAVSLYAHRVDAFSVDKSILSGYESKKTK 221 >gi|218779108|ref|YP_002430426.1| extracellular solute-binding protein family 3 [Desulfatibacillum alkenivorans AK-01] gi|218760492|gb|ACL02958.1| extracellular solute-binding protein family 3 [Desulfatibacillum alkenivorans AK-01] Length = 247 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 76/253 (30%), Gaps = 23/253 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + + ++ + ++ V AN D G+ Sbjct: 1 MLKKLMLIALAVSLFACPALASE----------KTIVFATDSTWPPMEFVDANKDIVGYA 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D+ A + + + F L + + D + + T R+ + F Sbjct: 51 IDYMNAAAKEAGFKAE---FKAVAWDGIFAGLDAGKYDAICSSVSITEDRKA--SMDFST 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q I+ K ++S+ L G + Q TT + ++ V Sbjct: 106 PYFRVKQAVIVPKDSTVTSLKDLVGQKVGSQISTTGTFAV-----KAEEGVISKTYDEVG 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLT---NDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R A D L + ++ + A+ +G+ E Sbjct: 161 LAVEDLFNGRIAAVVCDDPVAANYALQNDRYKGALKIAVVIEAGDVEYYGIAVKKGNKEV 220 Query: 238 YNIVSWTHYAMVT 250 ++V+ A+ Sbjct: 221 LDLVNKGIAAVKE 233 >gi|315181506|gb|ADT88419.1| ABC glutamine transporter extracellular solute-binding protein, family 3 [Vibrio furnissii NCTC 11218] Length = 263 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 90/241 (37%), Gaps = 10/241 (4%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 S+L L F + + A L ++++G LK + F V + G+D+D Sbjct: 7 MSSVLMSASLLFGATTAQADQLESVQQKGVLKVAVPQDFPPFGSVGTDLKPHGYDIDMAG 66 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 L+ + K++ +P+ + R LQ+ ++D++ + RE + F Sbjct: 67 YLAKKL---DVKLELVPVTSANRIPYLQTGKVDLVISSMGKNAEREKV--IDFSAAYAPF 121 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G + ++S LSG +I V G+ +L L+ + FE ++ Sbjct: 122 YLGVFGSSDEAVTSAQDLSGKTIGVTRGSVEDLELSKIAPS---DATIKRFEDNNATLSS 178 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + + + + P++ ++ SP +++G+ V+ Sbjct: 179 FLSGQVSLIATGNLVVTEIATRY--PAKAPQTKFLLKNSPCYVGVMKGEDALLKEVNRLI 236 Query: 246 Y 246 Sbjct: 237 T 237 >gi|228989958|ref|ZP_04149934.1| Extracellular solute-binding protein family 3 [Bacillus pseudomycoides DSM 12442] gi|228996155|ref|ZP_04155806.1| Extracellular solute-binding protein family 3 [Bacillus mycoides Rock3-17] gi|229003759|ref|ZP_04161570.1| Extracellular solute-binding protein family 3 [Bacillus mycoides Rock1-4] gi|228757492|gb|EEM06726.1| Extracellular solute-binding protein family 3 [Bacillus mycoides Rock1-4] gi|228763605|gb|EEM12501.1| Extracellular solute-binding protein family 3 [Bacillus mycoides Rock3-17] gi|228769782|gb|EEM18369.1| Extracellular solute-binding protein family 3 [Bacillus pseudomycoides DSM 12442] Length = 266 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 72/255 (28%), Gaps = 22/255 (8%) Query: 1 MYKDFFVSILCLIILFFTS---------FSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M K F V + + + + +T+ L IKK G G F Sbjct: 1 MKKLFSVLAVATLAVGIVAGCGKEEKKDTATSQDALQQIKKSGEFVVGTEGTYPPFTFHD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 GSGKLTGFDVELTEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--RED 115 Query: 112 ISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 F ++ K +S + + G + Q+ T+ LA A Sbjct: 116 RQKKYDFSKPYISSSAALVVAKDKDKPASFTDVKGLT-AAQSLTSNYADLAKKNGAK--- 171 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 E + R D +T + L + + I S Sbjct: 172 --IQGVEGFSQAVELLNTGRVD-FTINDKLSVLNYLQTKKDANIKIAATEKEASQSGFLF 228 Query: 231 IQGDTEWYNIVSWTH 245 +G + V Sbjct: 229 RKGSDKLVQEVDKAL 243 >gi|224582740|ref|YP_002636538.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224467267|gb|ACN45097.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 245 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 85/247 (34%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 3 MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + F Sbjct: 50 VDLANALCKEI---DASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + + + ++ + Sbjct: 105 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMD----KHQEITTVPYDSYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 160 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 219 Query: 239 NIVSWTH 245 + Sbjct: 220 QKFNTAL 226 >gi|304397041|ref|ZP_07378920.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. aB] gi|304355190|gb|EFM19558.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. aB] Length = 243 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 82/247 (33%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L L T+ ++ F V A+ +GFD Sbjct: 1 MKKMVLAALLAGFSLSATAAQ-------------TIRFATEASYPPFEYVDADNKIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + F Sbjct: 48 VDLANALCKEI---DATCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPDREK--QVLFTK 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ K ++SV L G + VQ GTT + L D + + ++ + Sbjct: 103 PYYDNSALFVAQKG-KVASVEALKGKRVGVQNGTTHQKYLTD----KHSDITIVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + + L A+ G+TE Sbjct: 158 NAVLDLKNGRIDAVFGDTAVVNEWLKQNAALAAVGDKVTDKAYFGTGLGIAVRTGNTELQ 217 Query: 239 NIVSWTH 245 + Sbjct: 218 TKFNGAL 224 >gi|294102366|ref|YP_003554224.1| extracellular solute-binding protein family 3 [Aminobacterium colombiense DSM 12261] gi|293617346|gb|ADE57500.1| extracellular solute-binding protein family 3 [Aminobacterium colombiense DSM 12261] Length = 251 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 88/257 (34%), Gaps = 17/257 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L I +F ++ A + ++ G + F + GFD Sbjct: 1 MKK--LVVLLAFIFVFVSAAGAMA---ESALDKDVIRVGTESTFRPFEFRNVKNEVVGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + ++ + +L +K+IDI++ T R ++F Sbjct: 56 IDLINMVAEKLGKK---VEIVDAAFDSLIPSLLTKKIDIIAAGMSATEERAK--RVSFSH 110 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y ++ ++ I++ L G VQ GT + D + F + Sbjct: 111 VYYITPSAVVVKAEETGITAEEDLKGKIATVQMGT-----IQDVYVTQLDLKEVKRFAKT 165 Query: 180 EEIDAAYRAHRCD-AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++ R D A LK D + ++ +A A+ + D ++ Sbjct: 166 DDAFREVLLGRADFAVVDGTVTKENLKENKDFTGTLKQVFELRIDKGMALALRKDDPQFL 225 Query: 239 NIVSWTHYAMVTAEELG 255 V+ + + L Sbjct: 226 EAVNKALDELKESGTLA 242 >gi|322833009|ref|YP_004213036.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] gi|321168210|gb|ADW73909.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] Length = 278 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 87/271 (32%), Gaps = 19/271 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ +I + + A L DIK G + GI+ + G+ G+ Sbjct: 1 MKK--IALLIAALITAGAAGTAQADTLSDIKSSGKITVGIDPTFPPYEFTNDKGEITGYS 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V ++ + + +++ L S + + + T R + F Sbjct: 59 VAIMQSFAKDLGVK---LEFQKTAFSGILPGLISGSFNAEGSSLNVTAERAK--KVLFTV 113 Query: 121 ITYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYF----KAHNMK 170 G ++ + S QLSG S V++ + E L + K Sbjct: 114 PYSKTVNGVLVREADVKKFSGKTLSPEQLSGLSGAVKSASVPEQLLKGFNETLTKEGKKP 173 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 I + +++ + R D DIS L + + + +A A Sbjct: 174 ITIISVDTLDQTVSTLMTKRADFVFDDISVLAPIVKKYPNKVA--QVGEAGPSQWMAWAT 231 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + DT +S AM EL QK Sbjct: 232 RKDDTRLNKAISDHILAMQKDGELTTLQKQY 262 >gi|207856322|ref|YP_002242973.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206708125|emb|CAR32418.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 243 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 83/247 (33%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ + + D T RE + F Sbjct: 48 VDLANALCKEI---DASCTFTNQAFDGLIPSLKFRRFNAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217 Query: 239 NIVSWTH 245 + Sbjct: 218 QKFNTAL 224 >gi|261247561|emb|CBG25388.1| lysine-arginine-ornithine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] Length = 260 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 91/279 (32%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + + + ++ G +T F+ A G++ GFD Sbjct: 1 MKKTVLALSLLIGLGATAASYAAIPQ--------TVRIGTDTTYAPFSSKDAKGEFIGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I ++ L G + V G+T E D ++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + A R DA D A L E+ + + + D Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE EL ++++K + +V Sbjct: 226 TELKAAFDKALT------ELRQDGT-YDKMAKKYFDFNV 257 >gi|294787061|ref|ZP_06752315.1| glutamate-binding protein [Parascardovia denticolens F0305] gi|315226711|ref|ZP_07868499.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Parascardovia denticolens DSM 10105] gi|294485894|gb|EFG33528.1| glutamate-binding protein [Parascardovia denticolens F0305] gi|315120843|gb|EFT83975.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Parascardovia denticolens DSM 10105] Length = 286 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 87/255 (34%), Gaps = 11/255 (4%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 I LI+ T+ +A K + GI G NG + GFDVD Sbjct: 14 RLLWKICSLILALTTAVGLSACGAVRGKSDHVITIGIKFDQPGLGYK-KNGTYSGFDVDV 72 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 R +++ + +I ++ +K+R LQ+ +D++ T R+ + + F Sbjct: 73 ARYIANKLGYKDYEINWVEAPSKQRETMLQNGDVDMILATYSITDDRKKT--VDFAGPYL 130 Query: 124 FDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 GQ ++ K I L G +C G+T+ + ++ K + E Sbjct: 131 VAGQDLLVRKDNTNIHGPQDLDGKRLCSVTGSTSATVIKQ---KYSNKVQLMEQPSYAEC 187 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG--DTEWYNI 240 A + DA T D L L ++ ++ I + + + Sbjct: 188 ATALFSGIVDAVTTDDIILAGLSANAR--GRLKLVGRPFTQEYYGVGIQKNAKSKAFAHK 245 Query: 241 VSWTHYAMVTAEELG 255 ++ MV Sbjct: 246 INAAINEMVATGAWQ 260 >gi|229159926|ref|ZP_04287933.1| Extracellular solute-binding protein family 3 [Bacillus cereus R309803] gi|228623665|gb|EEK80484.1| Extracellular solute-binding protein family 3 [Bacillus cereus R309803] Length = 265 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 35/254 (13%), Positives = 74/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSKPYVSSSAVLVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNGANI 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + R D +T + L + ++ I+ S Sbjct: 172 ENVE--GFSQAAELLNTGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G + V Sbjct: 229 KGSDKLVQEVDKAL 242 >gi|222106267|ref|YP_002547058.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] gi|221737446|gb|ACM38342.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] Length = 278 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 99/291 (34%), Gaps = 24/291 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M K F +L L L T S +A L IK RG L G+ F + + KGF Sbjct: 6 MTKTIFGFVLSLSALVATQASADA-TLDRIKGRGKLTVGVILSGAPFGYIDPKSQEQKGF 64 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VD +AL+ + + + R LQ ++DIL N +T R L F Sbjct: 65 NVDIAQALADDLGVKLETVT---VTPPNRVQFLQQGKVDILIANMQYTEDRAKV--LDFV 119 Query: 120 P-ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 P G ++ K G+ + L G +CV G+ L + + A Sbjct: 120 PTPYDRSGGAAVVRKDSGLKDWADLKGKPVCVSQGSNYTQPLIEEYGA-----VVKALPS 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E A + C A + + L + +P P I E Sbjct: 175 QPESLLALQGGNCVAAVHVGATVGLLLQDRPEEWKDYAIPFPTELVPSDSVIWLRKGE-- 232 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL 289 + T A+ A + + +K + R L ID +AL Sbjct: 233 ---ADTQTALDNAVKKLHVSGKLLDFAKSS------RLLNIDYLEQEHKAL 274 >gi|51244883|ref|YP_064767.1| amino acid ABC transporter, periplasmic substrate-binding protein [Desulfotalea psychrophila LSv54] gi|50875920|emb|CAG35760.1| probable amino acid ABC transporter, periplasmic substrate-binding protein [Desulfotalea psychrophila LSv54] Length = 255 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 89/251 (35%), Gaps = 17/251 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ + L F+ ++ L + GI+ FA V NG GFD Sbjct: 6 MSKKLITGLIVTLALSFSLSTSA---LAR-----TVVNGIDANYPPFAYVDKNGVPAGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + ++ + P+ A+ SK+ID + T R+ + F Sbjct: 58 VDSMNWIAKHM---DFEVIHKPMEWSTIVQAVASKKIDTVMSGMTITPERKA--QVNFSD 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I + F++ K +++ S L S + Q GT+ L KA ++ Sbjct: 113 IYWSVKNVFVVKKDSQLTTDSILASKGRVGYQTGTSDGKWLDKENKAQGWGLQLRQYDSS 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +I + R A +++ + I +I A+ D E Sbjct: 173 PQIISEVLNGRLLAGEMNMTPAHDAISK---GVPVKIAGNIGEHEDFGVAVRYDDKELLK 229 Query: 240 IVSWTHYAMVT 250 I++ ++ Sbjct: 230 IINQGLKDLMA 240 >gi|82543348|ref|YP_407295.1| arginine 3rd transport system periplasmic binding protein [Shigella boydii Sb227] gi|157155628|ref|YP_001462058.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli E24377A] gi|157160383|ref|YP_001457701.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli HS] gi|170020737|ref|YP_001725691.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli ATCC 8739] gi|191172082|ref|ZP_03033626.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli F11] gi|193064415|ref|ZP_03045496.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli E22] gi|193069339|ref|ZP_03050294.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli E110019] gi|194428194|ref|ZP_03060737.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli B171] gi|194433140|ref|ZP_03065422.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Shigella dysenteriae 1012] gi|194438447|ref|ZP_03070537.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli 101-1] gi|209918109|ref|YP_002292193.1| arginine ABC transporter substrate binding component [Escherichia coli SE11] gi|215485991|ref|YP_002328422.1| arginine 3rd transport system periplasmic binding protein ArtJ [Escherichia coli O127:H6 str. E2348/69] gi|218553446|ref|YP_002386359.1| arginine ABC transporter periplasmic-binding protein [Escherichia coli IAI1] gi|218557764|ref|YP_002390677.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|218688642|ref|YP_002396854.1| arginine ABC transporter subunit periplasmic-binding protein [Escherichia coli ED1a] gi|218694334|ref|YP_002402001.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|218699236|ref|YP_002406865.1| arginine ABC transporter subunit periplasmic-binding protein [Escherichia coli IAI39] gi|218704287|ref|YP_002411806.1| arginine ABC transporter periplasmic-binding protein [Escherichia coli UMN026] gi|253774110|ref|YP_003036941.1| cationic amino acid ABC transporter periplasmic binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160975|ref|YP_003044083.1| arginine transporter subunit [Escherichia coli B str. REL606] gi|256021019|ref|ZP_05434884.1| arginine-binding periplasmic protein 2 precursor [Shigella sp. D9] gi|260843111|ref|YP_003220889.1| arginine 3rd transport system periplasmic binding protein ArtJ [Escherichia coli O103:H2 str. 12009] gi|260854152|ref|YP_003228043.1| arginine 3rd transport system periplasmic binding protein ArtJ [Escherichia coli O26:H11 str. 11368] gi|260867033|ref|YP_003233435.1| arginine 3rd transport system periplasmic binding protein ArtJ [Escherichia coli O111:H- str. 11128] gi|293404165|ref|ZP_06648159.1| arginine ABC transporter [Escherichia coli FVEC1412] gi|293409235|ref|ZP_06652811.1| arginine ABC transporter [Escherichia coli B354] gi|293433158|ref|ZP_06661586.1| arginine transport system substrate-binding protein [Escherichia coli B088] gi|298379948|ref|ZP_06989553.1| arginine ABC transporter [Escherichia coli FVEC1302] gi|306812691|ref|ZP_07446884.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli NC101] gi|307311752|ref|ZP_07591392.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli W] gi|312969073|ref|ZP_07783280.1| arginine-binding periplasmic protein 2 [Escherichia coli 2362-75] gi|312970984|ref|ZP_07785163.1| arginine-binding periplasmic protein 2 [Escherichia coli 1827-70] gi|331656933|ref|ZP_08357895.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli TA206] gi|331662272|ref|ZP_08363195.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli TA143] gi|331667234|ref|ZP_08368099.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli TA271] gi|331682369|ref|ZP_08382988.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli H299] gi|81244759|gb|ABB65467.1| arginine 3rd transport system periplasmic binding protein [Shigella boydii Sb227] gi|157066063|gb|ABV05318.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli HS] gi|157077658|gb|ABV17366.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli E24377A] gi|169755665|gb|ACA78364.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli ATCC 8739] gi|190907609|gb|EDV67204.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli F11] gi|192928877|gb|EDV82490.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli E22] gi|192957292|gb|EDV87740.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli E110019] gi|194413754|gb|EDX30033.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli B171] gi|194418637|gb|EDX34724.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Shigella dysenteriae 1012] gi|194422671|gb|EDX38668.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli 101-1] gi|209911368|dbj|BAG76442.1| arginine ABC transporter substrate binding component [Escherichia coli SE11] gi|215264063|emb|CAS08405.1| arginine 3rd transport system periplasmic binding protein ArtJ [Escherichia coli O127:H6 str. E2348/69] gi|218351066|emb|CAU96770.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|218360214|emb|CAQ97764.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI1] gi|218364533|emb|CAR02215.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|218369222|emb|CAR16977.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI39] gi|218426206|emb|CAR07030.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli ED1a] gi|218431384|emb|CAR12262.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli UMN026] gi|222032589|emb|CAP75328.1| Arginine-binding periplasmic protein 2 [Escherichia coli LF82] gi|242376676|emb|CAQ31388.1| artJ, subunit of arginine ABC transporter [Escherichia coli BL21(DE3)] gi|253325154|gb|ACT29756.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972876|gb|ACT38547.1| arginine transporter subunit [Escherichia coli B str. REL606] gi|253977090|gb|ACT42760.1| arginine transporter subunit [Escherichia coli BL21(DE3)] gi|257752801|dbj|BAI24303.1| arginine 3rd transport system periplasmic binding protein ArtJ [Escherichia coli O26:H11 str. 11368] gi|257758258|dbj|BAI29755.1| arginine 3rd transport system periplasmic binding protein ArtJ [Escherichia coli O103:H2 str. 12009] gi|257763389|dbj|BAI34884.1| arginine 3rd transport system periplasmic binding protein ArtJ [Escherichia coli O111:H- str. 11128] gi|281177995|dbj|BAI54325.1| arginine ABC transporter substrate binding component [Escherichia coli SE15] gi|284920713|emb|CBG33776.1| arginine ABC transporter, substrate-binding protein [Escherichia coli 042] gi|291323977|gb|EFE63399.1| arginine transport system substrate-binding protein [Escherichia coli B088] gi|291428751|gb|EFF01776.1| arginine ABC transporter [Escherichia coli FVEC1412] gi|291469703|gb|EFF12187.1| arginine ABC transporter [Escherichia coli B354] gi|294492075|gb|ADE90831.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli IHE3034] gi|298279646|gb|EFI21154.1| arginine ABC transporter [Escherichia coli FVEC1302] gi|305853454|gb|EFM53893.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli NC101] gi|306908307|gb|EFN38806.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli W] gi|307552703|gb|ADN45478.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli ABU 83972] gi|310336745|gb|EFQ01912.1| arginine-binding periplasmic protein 2 [Escherichia coli 1827-70] gi|312286475|gb|EFR14388.1| arginine-binding periplasmic protein 2 [Escherichia coli 2362-75] gi|312945377|gb|ADR26204.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli O83:H1 str. NRG 857C] gi|315060145|gb|ADT74472.1| arginine transporter subunit [Escherichia coli W] gi|320177806|gb|EFW52792.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Shigella boydii ATCC 9905] gi|320183200|gb|EFW58058.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Shigella flexneri CDC 796-83] gi|320196645|gb|EFW71268.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli WV_060327] gi|320199095|gb|EFW73692.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli EC4100B] gi|323155766|gb|EFZ41935.1| arginine-binding periplasmic protein 2 [Escherichia coli EPECa14] gi|323159682|gb|EFZ45661.1| arginine-binding periplasmic protein 2 [Escherichia coli E128010] gi|323172173|gb|EFZ57811.1| arginine-binding periplasmic protein 2 [Escherichia coli LT-68] gi|323175518|gb|EFZ61113.1| arginine-binding periplasmic protein 2 [Escherichia coli 1180] gi|323185176|gb|EFZ70541.1| arginine-binding periplasmic protein 2 [Escherichia coli 1357] gi|323190682|gb|EFZ75951.1| arginine-binding periplasmic protein 2 [Escherichia coli RN587/1] gi|323379297|gb|ADX51565.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli KO11] gi|323947116|gb|EGB43127.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H120] gi|323953436|gb|EGB49302.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H252] gi|323958149|gb|EGB53858.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H263] gi|323962973|gb|EGB58545.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H489] gi|324116074|gb|EGC09998.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1167] gi|330910642|gb|EGH39152.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli AA86] gi|331055181|gb|EGI27190.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli TA206] gi|331060694|gb|EGI32658.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli TA143] gi|331065590|gb|EGI37483.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli TA271] gi|331080000|gb|EGI51179.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli H299] gi|332088881|gb|EGI93993.1| arginine-binding periplasmic protein 2 [Shigella boydii 5216-82] gi|332091102|gb|EGI96192.1| arginine-binding periplasmic protein 2 [Shigella dysenteriae 155-74] gi|332097166|gb|EGJ02149.1| arginine-binding periplasmic protein 2 [Shigella boydii 3594-74] Length = 243 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S ++F Sbjct: 48 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P V + L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNNALAAI 227 >gi|260102751|ref|ZP_05752988.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] gi|260083444|gb|EEW67564.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] Length = 272 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 86/233 (36%), Gaps = 10/233 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 L N ++ +K+ + G+ F G +GF++D AL+ + Sbjct: 19 ALTACGKRNNQNVYQKVKESKHIIWGVRADTRLFGLTNVKTGKIEGFEIDLAHALTKQML 78 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 + ++ A R L++ ID + T R + F + G ++ Sbjct: 79 GKDATASFVTTTANTRIPLLKNGNIDAVLATMTITPERAK--QVDFSKPYFPAGSSLLVP 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I +V L+G ++ GTT + + + ++ + +A +A++ Sbjct: 137 DNSKIKNVKDLNGETVLAVKGTTAVNDVHKFEPKA----RVLQYDDYGQAMSALKANQGV 192 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A T D L + + P + ++ + + +P A+ +G + + ++ Sbjct: 193 ALTTDNGLLAGIAQ--ENPG-YKLVGGVYNNAPYGIAVNKGQKDMVDHINKAL 242 >gi|239817008|ref|YP_002945918.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239803585|gb|ACS20652.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 275 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 52/235 (22%), Positives = 93/235 (39%), Gaps = 11/235 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQ 79 + +A L DIKK+G L G+ + G++VD A++ I P Sbjct: 20 AAHADQLADIKKKGELVVGVLGTDEPATFIDPKTRQIVGYEVDLVNAIAKKIGVKP---V 76 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + R LQ +D+++ RE + F T+ GQ I+ K GI+ Sbjct: 77 LKQIAVAARIPELQQGHVDLVAAGLTHNKEREA--QIDFSLTTFVTGQKAIVKKDSGITE 134 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V QL+G + G T E + + + F+ ++ A + + Y D + Sbjct: 135 VPQLAGKKVLTIRGGTQEPNI----RKAVPTAEVVTFDTSQQAFQALQQGKGVGYVDDEA 190 Query: 200 ALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 AL + +++V+L +S LA I +G++ +V T + + E Sbjct: 191 ALLRSYAKLGPQKAQYVVLKQNLSTEALAIGIKKGESALKAVVDDTLRELEKSGE 245 >gi|307627731|gb|ADN72035.1| arginine-binding periplasmic protein 2 precursor [Escherichia coli UM146] Length = 243 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S ++F Sbjct: 48 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P V + L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNNALAAI 227 >gi|22537577|ref|NP_688428.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 2603V/R] gi|22534460|gb|AAN00301.1|AE014257_8 amino acid ABC transporter, amino acid-binding protein [Streptococcus agalactiae 2603V/R] Length = 268 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 94/275 (34%), Gaps = 16/275 (5%) Query: 1 MYKDFFVSILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55 M K + IL L+ + S++ + ++K+G L ++ F V Sbjct: 1 MSKKIILGILSLLSVVTLVACGSSDKQLQDKVEKKGKLVLAVSPDYAPFEFKALVNGKDK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G D++ +A++ + K++ P++ +LQ+ + D+ +T R Sbjct: 61 VVGADIELAQAIADEL---HVKLEVSPMSFDNVLSSLQTGKADMAISGLSYTKERAKV-- 115 Query: 116 LAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F Y ++ K +S+ L G I VQ G+ E FK H Sbjct: 116 YDFSKPYYTTENAVLVRKSDLGKYTSIESLKGKKIAVQKGSIEEGVSKKSFK----NSHV 171 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + E + ++ + +A + + N A A+ + Sbjct: 172 VSLTAMGEAISELKSGKVEAVDLEKTVAEGYLAQNPDLVLAKFALKTGEGDAKAVALPKD 231 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + V+ + ++ + + +++ + Sbjct: 232 SGKMLKTVNKVIKRLEKEDKYKVYISDAAKLTGNQ 266 >gi|26987024|ref|NP_742449.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas putida KT2440] gi|24981643|gb|AAN65913.1|AE016219_6 amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas putida KT2440] Length = 250 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 87/252 (34%), Gaps = 22/252 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 YK F ++ +++ + + L+ GI F A+G+ GFD Sbjct: 4 YKKFLLAAAATLVMSANAMAAE-----------KLRMGIEAAYPPFNNKDASGNVVGFDK 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D AL + + + + + AL +K+ D L + T R+ + F Sbjct: 53 DIGDALCAKMKVE---CSVVTSDWDGIIPALNAKKFDFLVSSLSITDERK--QAVDFTNP 107 Query: 122 TYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K + + L G I Q T L D + +++ E Sbjct: 108 YYSNKLQFIAPKNVDFKTDKESLKGKVIGTQRATLAGTYLED----NYPDVEIKLYDTQE 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + R D D Y + D + ++ + A+ +GDT+ + Sbjct: 164 NAYLDLVSGRIDGILADKYVQYEWLKSKDGSNFEFKGEPVMDSDKIGIAVRKGDTKLRDD 223 Query: 241 VSWTHYAMVTAE 252 ++ A + A+ Sbjct: 224 LNKAL-AEIKAD 234 >gi|323143937|ref|ZP_08078595.1| putative arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Succinatimonas hippei YIT 12066] gi|322416301|gb|EFY06977.1| putative arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Succinatimonas hippei YIT 12066] Length = 250 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 76/248 (30%), Gaps = 19/248 (7%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 ++ + F + A L+ G F + N +G+D+D A+ Sbjct: 11 TLCAAAAVTFCAVQAQAE---------VLRVGTEATYAPFEFMDDNVQPQGYDIDIINAV 61 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 A+ D +Q + AL + QID++ T R + Sbjct: 62 GKAMGYD---VQVQNMAFDGLIPALMTSQIDVVIAAMTITEERAKRVDFTEPYYKSGLSI 118 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + K ++ L +C Q GTT KA + + F E + Sbjct: 119 LILEENKDKFKTIDDLKNERLCAQIGTTGA------LKAQEISGNVGAFNTEPEAFMELK 172 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 A C D + + + I+ A+ +G++E ++ Sbjct: 173 AKGCAGVVNDRPVNLYFLTK-SASKGVIEMSERITAEDYGIAVRKGNSELLKALNEGLKK 231 Query: 248 MVTAEELG 255 + + E+ Sbjct: 232 IKESGEMA 239 >gi|153011129|ref|YP_001372343.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151563017|gb|ABS16514.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 257 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 74/246 (30%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ +I + + L IK G LK G F + GFD Sbjct: 1 MKFAQIIATAGIIQAALFTGAMAGENLDAIKSAGVLKIGTEGTYAPFTYHDKDNKLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A+++ + P ++ L SK+ D + T R+ F Sbjct: 61 VEIGEAVAAKLGVKPE---FVEGKWDGLIAGLDSKRYDAVINQVGITEERQK--KFNFSN 115 Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + K I + L G Q+ T+ LA A + + Sbjct: 116 PYIVSKVVLIVNDKDDTIKDFADLKGKKSA-QSLTSNYGKLAKEAGA-----ELVATDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ R DA D + K + ++ + + + +GD + Sbjct: 170 DQSIQLVLTGRADATLNDSLSFLDFKKHQPKAPV-KVVAEKENADASGIIVRKGDDDLVT 228 Query: 240 IVSWTH 245 ++ Sbjct: 229 AINKAL 234 >gi|302554581|ref|ZP_07306923.1| glutamate binding protein [Streptomyces viridochromogenes DSM 40736] gi|302472199|gb|EFL35292.1| glutamate binding protein [Streptomyces viridochromogenes DSM 40736] Length = 279 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 37/256 (14%), Positives = 80/256 (31%), Gaps = 13/256 (5%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M + + + L T+ + + + GI G + G Sbjct: 1 MKLRKVTAASATVFALALTATACGGNNSTGGDSGSGGGKSITVGIKFDQPGLGQKTPQG- 59 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFDVD ++ + + +I++ + +R L+ +D ++ T R+ Sbjct: 60 YAGFDVDVATYVAKKLGYNADQIEWKESKSGDRETMLKRGDVDFIAATYSITPERQKL-- 117 Query: 116 LAFRPIT-YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F + I S L+ A +C G+T+ + D K Sbjct: 118 VDFAGPYLLAHQDVLVRADDSKIKSPKDLNNAKLCSVTGSTSAQNVKDKLA---PKAQLQ 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + DA T D S L + + ++ + +G Sbjct: 175 PYPTYSACLPGLQNGAVDALTTDDSILAGYASQAQFKGKFKLGGFKLTNENYGIGVKKG- 233 Query: 235 TEWYNIVSWTHYAMVT 250 ++ + ++ MV Sbjct: 234 SDLKDKINKALEDMVA 249 >gi|254389483|ref|ZP_05004710.1| glutamate binding periplasmic protein [Streptomyces clavuligerus ATCC 27064] gi|294815860|ref|ZP_06774503.1| Putative glutamate ABC transporter substrate-binding protein [Streptomyces clavuligerus ATCC 27064] gi|326444202|ref|ZP_08218936.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces clavuligerus ATCC 27064] gi|197703197|gb|EDY49009.1| glutamate binding periplasmic protein [Streptomyces clavuligerus ATCC 27064] gi|294328459|gb|EFG10102.1| Putative glutamate ABC transporter substrate-binding protein [Streptomyces clavuligerus ATCC 27064] Length = 301 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 81/225 (36%), Gaps = 10/225 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++ + RG G E G + GFD++ R +S+++ DP++I ++ Sbjct: 49 SSPTWRKAEARGHFVVGAKEDQPYLGEKDPATGLYSGFDIEIARMVSASLGLDPARISFV 108 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + + R ALQ+ QID R+ +G F Y GQ ++ K I Sbjct: 109 TIASANRETALQNGQIDYYVGTYTINDNRKKLVG--FAGPYYMAGQDLLVRKDETDIKGP 166 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G +C G+T + + + ++ ++ DA T D + Sbjct: 167 EDLAGKRVCSATGSTPYQRIKQDYPQA----VLVSYDTYSICVDNLLTYQVDAVTTDDAI 222 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L P E ++ S+ P + + D + Sbjct: 223 LTGYAAKA--PDELKVVGKPFSQEPYGIGVPRSDNALRFAIDDAL 265 >gi|118476506|ref|YP_893657.1| amino acid ABC transporter amino acid-binding protein [Bacillus thuringiensis str. Al Hakam] gi|196046984|ref|ZP_03114204.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB108] gi|225862823|ref|YP_002748201.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB102] gi|229074556|ref|ZP_04207585.1| Extracellular solute-binding protein family 3 [Bacillus cereus Rock4-18] gi|229095490|ref|ZP_04226481.1| Extracellular solute-binding protein family 3 [Bacillus cereus Rock3-29] gi|229114442|ref|ZP_04243860.1| Extracellular solute-binding protein family 3 [Bacillus cereus Rock1-3] gi|229183180|ref|ZP_04310410.1| Extracellular solute-binding protein family 3 [Bacillus cereus BGSC 6E1] gi|300119245|ref|ZP_07056939.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus SJ1] gi|118415731|gb|ABK84150.1| amino acid ABC transporter substrate-binding protein, PAAT family [Bacillus thuringiensis str. Al Hakam] gi|196022213|gb|EDX60900.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB108] gi|225790687|gb|ACO30904.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus 03BB102] gi|228600319|gb|EEK57909.1| Extracellular solute-binding protein family 3 [Bacillus cereus BGSC 6E1] gi|228669121|gb|EEL24545.1| Extracellular solute-binding protein family 3 [Bacillus cereus Rock1-3] gi|228688036|gb|EEL41923.1| Extracellular solute-binding protein family 3 [Bacillus cereus Rock3-29] gi|228708676|gb|EEL60820.1| Extracellular solute-binding protein family 3 [Bacillus cereus Rock4-18] gi|298723353|gb|EFI64101.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus SJ1] Length = 265 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 74/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSKPYVSSSAVLVIAKDKDKPATFADVKGLK-AAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 E + R D +T + L + ++ I+ S Sbjct: 170 EITNVEGFSQAAELLNTGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G + V Sbjct: 229 KGSDKLVQEVDKAL 242 >gi|331651878|ref|ZP_08352897.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli M718] gi|331050156|gb|EGI22214.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli M718] Length = 260 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 18 MKKLVLAALLASFTFGTSAAE-------------KINFGVSATYPPFESIGANNEIVGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S ++F Sbjct: 65 IDLAKALCKQM---QAECTFANHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 120 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P V + L A+ + Sbjct: 175 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 232 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 233 LLEKLNNALAAI 244 >gi|332040838|gb|EGI77210.1| extracellular solute-binding protein family 3 [Hylemonella gracilis ATCC 19624] Length = 267 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 79/252 (31%), Gaps = 14/252 (5%) Query: 1 MYKDFFV----SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + F+ + + + L + + +K + T + V + Sbjct: 1 MNRRPFLHAMLGAAATTLALLCTPAQAQDALSQVMQTKKIKIAVPTDYPPYGFVGLDLQP 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +G D++ + +++ + ++ +P+ + R LQ+ Q+ ++ + + Sbjct: 61 QGLDIEVAKLIANKLG---VSVELVPVTSANRIPYLQTGQVQLVISTLGKNP--DRMKVI 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Q K I S + L G +I V G E L A + Sbjct: 116 DFTHAYSPFFQAVYAPKSLAIKSFADLGGKTIAVAKGAMEEQELVKSGPA---SMVFKRY 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E AA+ A + S A + P +I SP + +G Sbjct: 173 EDQAASTAAFVAGQTQVIAT--SVSNAGLMMQKNPQLGAEFKLLIKDSPNFIGVAKGQDA 230 Query: 237 WYNIVSWTHYAM 248 V+ A Sbjct: 231 LRAKVNDILLAA 242 >gi|206562729|ref|YP_002233492.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] gi|198038769|emb|CAR54731.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] Length = 260 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 92/255 (36%), Gaps = 21/255 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ + + +L ++ A K ++ G + F +G GFD Sbjct: 1 MKR--LIAAVSIALLAVSAGPAVA------KDWTTIRFGTDASYAPFESKAPDGKLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + +K +L + AL++K+ D + + T R +G F Sbjct: 53 IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITPQRAQQIG--FTT 107 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y ++ K + + L G SI V+ GTT E Y+ + + ++ Sbjct: 108 KIYNQPTRLVVKKGSPLLPTAESLKGKSIGVEQGTTQETYAKAYWGKQG--ANVVSYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + A A R DA D L + R + + + + + + Q D Sbjct: 166 DGVYADLIAGRLDAALQDEVQAAIGFLKSPRGANYTFVGPELVDEKVLGIGAGIGLRQED 225 Query: 235 TEWYNIVSWTHYAMV 249 T+ + MV Sbjct: 226 TDLKAKIDRAILDMV 240 >gi|326797153|ref|YP_004314973.1| ABC-type transporter periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] gi|326547917|gb|ADZ93137.1| ABC-type transporter, periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] Length = 268 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 94/255 (36%), Gaps = 22/255 (8%) Query: 1 MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + L T+ ++ AS + I LK G + F +G + Sbjct: 1 MKFGFKKALTGLALAGSLLATTQASAASAIDGILSSNELKVCFEAGYIPFEMKTKDGRFI 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLN--AKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D + ++ ++ ++++P+N ALQ+++ DI+ T R +L Sbjct: 61 GFDIDLGKHMARSM-----DVKFVPVNTAWDGIIPALQTEKCDIIMGGMTVTAQR--NLK 113 Query: 116 LAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICV--QAGTTTELTLADYFKAHNMKY 171 + F GQ ++ + I+S L+ + Q GTT Y + Sbjct: 114 VMFSNPYITIGQTVVIKPELKGTITSYKDLNNPKYTITSQIGTTGAEAAKKYLPKAKLD- 172 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 +FE + + DA+ D+ + H L + + PL AI Sbjct: 173 ---LFETSADGVLQVANGKADAFVYDLPFNALYSSQHKDTVVH--LDESFTYEPLGWAIR 227 Query: 232 QGDTEWYNIVSWTHY 246 Q D + N ++ Sbjct: 228 QDDPNFLNFLNNYLT 242 >gi|295095483|emb|CBK84573.1| L-cystine-binding protein/Diaminopimelate-binding protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 266 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 85/254 (33%), Gaps = 20/254 (7%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M + + L+ ++L +K+RG L G+ F+ + Sbjct: 1 MKLALLGRQALMGMMAVALVAGMSVKTFAAENLLNKVKERGTLLVGLEGTYPPFSFQGDD 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+V+F + L+ + P +L SK+ID++ + R+ Sbjct: 61 GKLTGFEVEFAQELAKHLGVKA---SLKPTKWDGMLASLDSKRIDVVINQVTISDERKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I S + L G + V GT E ++ + + Sbjct: 117 -KYDFSTPYTVSGIQALVKKGNEGSIKSAADLKGKKVGVGLGTNYE----EWLRQNVQGV 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R R DA D L AL L + + D S+ A+ Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDLVKKTNNTLAVAGDAFSRQESGVAVR 229 Query: 232 QGDTEWYNIVSWTH 245 +G+ + + Sbjct: 230 KGNEDLLKAIDGAI 243 >gi|239831830|ref|ZP_04680159.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] gi|239824097|gb|EEQ95665.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] Length = 268 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 LK G F + +G GFDVD +AL + + +++ ALQ+ Sbjct: 35 KLKIGTEGAYPPFNFINPDGTLSGFDVDIAKALCEEMKAE---CEFVTQEWDGAIPALQA 91 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152 + D + T R+ + F Y G K I + L+G +I VQ Sbjct: 92 GKFDAFIASMSITDERKK--QVDFSNKYYNTPPGIAAPKDTDIKGVTKEDLAGKTIGVQV 149 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT F + EE R DA D L + D Sbjct: 150 STTHSNYSEKTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLAQWLKSPDGAC 205 Query: 213 EHVILPDIISKSPLAP----AIIQGDTEWYNIVSWTHYAM 248 ++ P A +G E + A+ Sbjct: 206 CKMVGTFPPVIEIHGPGAGVAFKKGRPELVEKFNAAIKAI 245 >gi|300947050|ref|ZP_07161271.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 116-1] gi|300957064|ref|ZP_07169309.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 175-1] gi|300316149|gb|EFJ65933.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 175-1] gi|300453289|gb|EFK16909.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 116-1] Length = 260 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + GI+ F + AN + GFD Sbjct: 18 MKKLVLAALLASFTFGASAAE-------------KINFGISATYPPFESIGANNEIVGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S ++F Sbjct: 65 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 120 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P V + L A+ + Sbjct: 175 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 232 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 233 LLEKLNNALAAI 244 >gi|329935647|ref|ZP_08285454.1| bifunctional protein [Streptomyces griseoaurantiacus M045] gi|329304908|gb|EGG48779.1| bifunctional protein [Streptomyces griseoaurantiacus M045] Length = 665 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 72/224 (32%), Gaps = 1/224 (0%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 R L G G + G W GFD+D AL+ + D ++ + + R Sbjct: 413 ARKRLTIGAKEDQPGLSLHDRKGVWSGFDIDIAYALARELGYDEKQVDFYGVTTANRASK 472 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS-ICV 150 L++ ++D++ + T RE G+ F Y G ++ +K + + V Sbjct: 473 LRNGEVDLVVASYSMTPEREKRDGIRFVGPYYKAGTSLLVRRKSARYDLDEAVDVKRNHV 532 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 T + T AD + + +E Y + D Sbjct: 533 DVCTARDSTYADRLRKDGYTTGKWQPDTYKECVKRLLDRNSSVYAVASDDVLLAGYAKDD 592 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 P+ +LP P A+ + D V ++ E Sbjct: 593 PAHLKLLPSGSGTEPYGVAMRKDDPLLRGRVCSALRKILAGAEW 636 >gi|313893698|ref|ZP_07827265.1| putative arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Veillonella sp. oral taxon 158 str. F0412] gi|313441712|gb|EFR60137.1| putative arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Veillonella sp. oral taxon 158 str. F0412] Length = 268 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 79/257 (30%), Gaps = 21/257 (8%) Query: 3 KDFFVS--ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 K V +L + +++ L G N V F + GF Sbjct: 7 KKLIVGSCMLVMAGSLVGGCGSSSQT-----TSNKLIVGTNATFVPFEFKDEKTQDYTGF 61 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D++ RA+ I D ++ + AL ++ ID+ + T R S + F Sbjct: 62 DIELIRAIGKRINKD---VELKNIAFDALIPALNTRDIDVAASGMTITKAR--SKKVLFS 116 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + + ++S+ L G I Q GTT F+ Sbjct: 117 SPYYENALAVVYKDGTTVNSLDDLKGKKIAAQLGTTGADLAHKIEGTA-----VKEFDHS 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEWY 238 E + DA D+ A + P +H + +K L A+ + + Sbjct: 172 NEALLELQNGGVDATVIDLP--VAQYYSTKHPDQHIKFMAYPNTKEYLGLAMNKDNKALQ 229 Query: 239 NIVSWTHYAMVTAEELG 255 ++ M E Sbjct: 230 EQINKAIADMKADGEFN 246 >gi|209549649|ref|YP_002281566.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535405|gb|ACI55340.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 257 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 89/261 (34%), Gaps = 23/261 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + F + + + LF S + G ++ F V A+G +GFD+D Sbjct: 6 RIFAAASIAAMSLFAGSAMADGE---------KYVIGTDSTYPPFEFVDASGTIQGFDID 56 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +AL + + ++ ++ + AL +K+ D++ + T R + F Sbjct: 57 ITKALCAEM---KAECSFVSTDWDGIIPALNAKKFDMIVSSMSITPERLKL--VDFSNKY 111 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y + K I+ V+ L G I Q TT + ++ +E Sbjct: 112 YNTPPAIAVPKDSKITDVAGLKGKVIGAQTSTTHANYAEKHLA----DTELKLYPTADEY 167 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWY 238 + R DA D+ L ++ ++ + K AI +GD Sbjct: 168 KLDVSSGRVDAVIDDVVVLSEWVKSDAGACCKILTTLPVDKEINGNGAGIAIRKGDP-LK 226 Query: 239 NIVSWTHYAMVTAEELGITQK 259 ++ A+ + E Q Sbjct: 227 EKLNTAIAAIRASGEYKKIQD 247 >gi|300716010|ref|YP_003740813.1| Glutamine high-affinity transporter [Erwinia billingiae Eb661] gi|299061846|emb|CAX58962.1| Glutamine high-affinity transporter [Erwinia billingiae Eb661] Length = 248 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 87/249 (34%), Gaps = 21/249 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M S+ L + F S + L +T V F + N ++ GFD Sbjct: 1 MKSIVKFSLAALTLAFAVSSTAAE---------KKLVVATDTAFVPFEFKQGN-EYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + + P++ ALQ++ ID+ T RE + F Sbjct: 51 VDLWAAIAKQLNIEY---TLKPMDFSGIIPALQTRNIDLALAGITITPEREK--AIEFSD 105 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I S++ L G + V++GT + ++ K+ F + Sbjct: 106 GYYKSGLLVMVKANNDKIKSIADLDGKVVAVKSGTGSVDYAKEHIKSK----ELHQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + +R DA D + T + + + + IS A +G E Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFINTAGKG-QFKAVGESISAQQYGIAFPKGSDELRE 220 Query: 240 IVSWTHYAM 248 V+ + Sbjct: 221 KVNGALKVL 229 >gi|218548379|ref|YP_002382170.1| arginine ABC transporter periplasmic-binding protein [Escherichia fergusonii ATCC 35469] gi|218355920|emb|CAQ88535.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia fergusonii ATCC 35469] Length = 243 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 82/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASCAFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ K+ D + D T R S ++F Sbjct: 48 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFKKYDAVISGMDITPER--SKQVSFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + T P V + L A+ + Sbjct: 158 NAVIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNNALAAI 227 >gi|218232648|ref|YP_002368957.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus B4264] gi|218160605|gb|ACK60597.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus B4264] Length = 259 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 89/254 (35%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++IL S +N + L G + + V+A+ + G Sbjct: 1 MKKLVSISFALILILSMFSACSNGESKETKGNKKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIQSVEGLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R DA + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFDAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|148545555|ref|YP_001265657.1| extracellular solute-binding protein [Pseudomonas putida F1] gi|148509613|gb|ABQ76473.1| extracellular solute-binding protein, family 3 [Pseudomonas putida F1] Length = 250 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 88/252 (34%), Gaps = 22/252 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 YK F ++ +++ + + L+ GI F A+G+ GFD Sbjct: 4 YKKFLLAAAATLVMSANAMAAE-----------KLRMGIEAAYPPFNNKDASGNVVGFDK 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D AL + + + + + AL +K+ D L + T R+ + F Sbjct: 53 DIGDALCAKMKVE---CSVVTSDWDGIIPALNAKKFDFLVSSLSITDERK--QAVDFTEP 107 Query: 122 TYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K + + L G I Q T L D FK +++ E Sbjct: 108 YYSNKLQFIAPKNVDFKTDKESLKGKVIGTQRATLAGTYLEDNFK----GVDIKLYDTQE 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + R D D Y + D + ++ + A+ +GDT+ + Sbjct: 164 NAYLDLVSGRIDGILADKYVQYEWLKSKDGSNFEFKGEPVMDSDKIGIAVRKGDTKLRDD 223 Query: 241 VSWTHYAMVTAE 252 ++ A + A+ Sbjct: 224 LNKAL-AEIKAD 234 >gi|225028750|ref|ZP_03717942.1| hypothetical protein EUBHAL_03029 [Eubacterium hallii DSM 3353] gi|224953941|gb|EEG35150.1| hypothetical protein EUBHAL_03029 [Eubacterium hallii DSM 3353] Length = 266 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 89/264 (33%), Gaps = 27/264 (10%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILG------DIKKRGFLKCGINTGLVG 46 M K V++ ++ + + S +S K G L N Sbjct: 3 MKKLAAVALAVVMSVSMLAGCGSSNDKKSAESSTSANGTATVKTAKDGVLTMATNATFPP 62 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + + N D G D D +A++ + K++ + A+QS + D+ Sbjct: 63 YESYEGN-DIVGIDADIAKAIADKLG---LKLEIQDMEFNSIITAVQSGKADLGLAGMTV 118 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + F Q I+ + I S+ L G I VQ TT ++ D F Sbjct: 119 TDERK--QSVDFTDSYATGIQSVIVKEGSSIKSIDDLKGKKIGVQLATTGDIYAKDDFGE 176 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 N + + + A + + DA D K + IL + Sbjct: 177 EN----VEEYNKGADAVMALTSGKIDAVIIDN---QPAKSFVETTDGLQILDTDYVQEDY 229 Query: 227 APAIIQGDTEWYNIVSWTHYAMVT 250 A AI +G+T+ N V+ + Sbjct: 230 AAAIQKGNTDLLNAVNGALKELKE 253 >gi|153009544|ref|YP_001370759.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151561432|gb|ABS14930.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 268 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 76/253 (30%), Gaps = 18/253 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + + + I + A+ + K L G F +G GFDV Sbjct: 5 KRIAVAASIVGIAATASGLVIGAATAEEPLK---LVIGTEGAYPPFNFTNPDGSLSGFDV 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D RAL + ++ ++ ALQ+ + D + T R+ + F Sbjct: 62 DIARALCEEM---KAECTFITQEWDGTIPALQAGKFDAYVSSMSITDERKK--QVDFSNK 116 Query: 122 TYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G + K I + L+G +I VQ TT F + Sbjct: 117 YYNTPPGIAVPKDSDIKGVTKEDLAGKTIGVQVSTTHANYAEHAF----TDSTIKAYPTA 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDT 235 EE R DA D L T D ++ + A+ +G Sbjct: 173 EEYRLDMANGRLDAVNDDSVTLSEWLKTPDGACCKMVGTYPSDDNIHGVGVGVALKKGRP 232 Query: 236 EWYNIVSWTHYAM 248 E + A+ Sbjct: 233 ELVEKFNNAIKAI 245 >gi|107104175|ref|ZP_01368093.1| hypothetical protein PaerPA_01005248 [Pseudomonas aeruginosa PACS2] gi|296391926|ref|ZP_06881401.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa PAb1] Length = 259 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 86/243 (35%), Gaps = 14/243 (5%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 +L + L + A + D KRG L+ G++ + F G GF+VD +A+ Sbjct: 1 MVLGVCALVGVASVQAAGAVEDAVKRGTLRVGMDPTYMPFEMTNKRGQIIGFEVDLLKAM 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + ++ ++ + + AL + + D++ T R +L L F GQ Sbjct: 61 AKSMGVK---LELVSTSYDGIIPALLTDKFDMIGSGMTLTQER--NLRLNFSEPFIVVGQ 115 Query: 128 GFIMHKKKG--ISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFERVEEID 183 ++ K+ I S L+ + + TT E+ F+ E Sbjct: 116 TLLVRKELEGKIKSYKDLNDPQYSITSKIGTTGEIVARKLISKAKYHG----FDNEPEAV 171 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + DA+ D V L + PLA + +GD + N ++ Sbjct: 172 MDVVNGKADAFIYDSPYNVVAVSKFGAGK-LVYLDQPFTYEPLAFGLKKGDYDSINFINN 230 Query: 244 THY 246 + Sbjct: 231 FLH 233 >gi|167584967|ref|ZP_02377355.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia ubonensis Bu] Length = 260 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 90/255 (35%), Gaps = 21/255 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ + + +L ++ A K L+ G + F +G GFD Sbjct: 1 MKR--LIAAVSIALLAVSAGPAAA------KDWTTLRFGTDASYAPFESKAPDGKLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + +K +L + AL++K+ D + + T R + F Sbjct: 53 IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITAQRAEQIA--FTT 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y ++ K + + L G SI V+ GTT E Y+ + + ++ Sbjct: 108 KIYNQPTRLVVKKGSPLVPSADSLKGKSIGVEQGTTQEAYAKAYWAKQG--ANVVSYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + A A R DA D L + R + + + + + + + D Sbjct: 166 DGVYADLLAGRLDAALQDEVQAAIGFLKSPRGAGYQFVGPELVDEKVLGVGAGIGLRKED 225 Query: 235 TEWYNIVSWTHYAMV 249 + + MV Sbjct: 226 ADLKAKIDRAILDMV 240 >gi|330954118|gb|EGH54378.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae Cit 7] Length = 277 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 90/235 (38%), Gaps = 13/235 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYL 81 +A L D+ + L CG+ + F+ + G DVD C+AL+ + + ++ Sbjct: 21 HADQLSDVMSKKSLSCGVYADVPPFSAPDPQTRELVGMDVDLCKALAKHMGVE---LELK 77 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 PL+ + R ++ ++D++ N +T R + + F Y + ++ S Sbjct: 78 PLSVEARIPEVKMGRVDVIFANLAYTKSR--ADQIQFSDPYYIAKETLVVRAANADQPKS 135 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 G I G+T+E ++ P+ F+ A + ++ + Sbjct: 136 CFKGKRISSTKGSTSEQSIR------LADATPVTFQDTGSAYMALQQNKVVGLVTNTMTA 189 Query: 202 YALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L E I + ++ P+ + QG+ + V+ + AM A E+ Sbjct: 190 IKLVGQAKAGGVELAIAKEPMALEPIGAGMRQGEPAFLAKVNESLRAMEAAGEID 244 >gi|308187257|ref|YP_003931388.1| ABC transport system, periplasmic protein precursor [Pantoea vagans C9-1] gi|308057767|gb|ADO09939.1| Putative ABC transport system, periplasmic protein precursor [Pantoea vagans C9-1] Length = 266 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 85/247 (34%), Gaps = 15/247 (6%) Query: 3 KDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ + ++ + ++L IK+RG L G+ F+ G GF+ Sbjct: 8 RQMVMGVMAVALIAGVNVKTFAAENLLNKIKERGTLLVGLEGTYPPFSFQDEKGKLTGFE 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+F L+ + P +L +K+ID++ + R+ F Sbjct: 68 VEFAEQLAQHMGVKA---SLKPTKWDGMLASLDAKRIDVVINQVTISDERKK--KYDFST 122 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G + K I+ + L+G + V GT E L + K ++ Sbjct: 123 PYTVSGIQALTMKANAGTITKPADLAGKKVGVGLGTNYEQWLRENVK----GVDIRTYDD 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R+ R +A D L AL L + D S+ A+ +G+ + Sbjct: 179 DPTKYQDLRSGRLNAILVDR--LAALDLVKKTGDTMAVAGDAFSRQESGVAVRKGNDDLL 236 Query: 239 NIVSWTH 245 + Sbjct: 237 KAIDQAI 243 >gi|213852331|ref|ZP_03381863.1| arginine-binding periplasmic protein 2 precursor [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 243 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 38/250 (15%), Positives = 80/250 (32%), Gaps = 25/250 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + + G++ F + A+ GFD Sbjct: 1 MKKLVLAALLASFATGSIAAE-------------KINFGVSATYPPFESLDASNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + ++ + AL+ ++ D + D T R + F Sbjct: 48 IDLATALCKQM---QAECTFTNHAFDSLIPALKFRKYDAVISGMDITPERSKQVA--FSN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++ KK + + L G I ++ GTT + L D + ++ + Sbjct: 103 PY-YANSALVIAKKDTYKTFTDLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + D GD + + TN + P+ + + L A+ + Sbjct: 158 NAIIDLKNGHIDGVFGDTAVVNEWLKTNPQLGPATEKVTDPQYFGTGLGIAVRPDNKALL 217 Query: 239 NIVSWTHYAM 248 ++ A+ Sbjct: 218 EKLNNALAAI 227 >gi|329296932|ref|ZP_08254268.1| family 3 extracellular solute-binding protein [Plautia stali symbiont] Length = 261 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 83/222 (37%), Gaps = 10/222 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A L DI+KRG ++ + F V N +G+D+D + L+ + K+Q +P+ Sbjct: 23 ADQLQDIQKRGVIRVAVPQDFPPFGSVGTNLQPQGYDIDMAKYLAKQM---KLKLQLVPV 79 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R LQ+ ++D++ + RE + F G K + + + L Sbjct: 80 TSANRVPYLQTDKVDLVISSMGKNAEREKV--IDFSRAYAPFFLGVFGPKGETLKDAAAL 137 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 SG SI V G ++ L+D +E +AY + + + A Sbjct: 138 SGKSIGVTRGAVEDMVLSDVAPK---DAQVKRYEDNTTTLSAYLSGQVQYVATGNLVVAA 194 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + + ++ SP + + + V+ Sbjct: 195 IARQ--NAEKAPVPQFMLKDSPCVIGLKKNEPALKEKVNALI 234 >gi|317498349|ref|ZP_07956646.1| bacterial extracellular solute-binding protein, family 3 [Lachnospiraceae bacterium 5_1_63FAA] gi|316894371|gb|EFV16556.1| bacterial extracellular solute-binding protein, family 3 [Lachnospiraceae bacterium 5_1_63FAA] Length = 268 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 40/255 (15%), Positives = 82/255 (32%), Gaps = 16/255 (6%) Query: 1 MYKDFFVSI-LCLIILFFTSFST------NASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K + + L + L D++ + L G+++ Sbjct: 1 MKKFLVGLLTVALAASMLVGCGKKEEKKKADNSLKDVQSKKELVLGLDSSFPPMGFTDKK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFD+D + ++ + K++ P+N + L ++++D L ++ R Sbjct: 61 DNIVGFDIDLAKEVTKRMG---IKLKLQPINWNSKEQELNTEKVDCLWNGVTYSKARAKE 117 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + Q I+ I S+ ++ + +T AD K Sbjct: 118 MLC--SESYMDNHQVLIVPANSKIKSLKDITKDTEVGIQSGSTAADAADSVKELKNS-KI 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + +I DA D + A T ++ +L D ++K + Sbjct: 175 KLLADNVQILNDLGHG-LDAAVMDE--VVAKYYTKKDAGKYKVLEDSVAKEKYVIGFRKD 231 Query: 234 DTEWYNIVSWTHYAM 248 D N V AM Sbjct: 232 DKALCNEVVKQLKAM 246 >gi|205357022|ref|ZP_02344159.2| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205324568|gb|EDZ12407.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 245 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 84/247 (34%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 3 MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + F Sbjct: 50 VDLANALCKEI---DASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G ++ VQ GTT + + D + ++ + Sbjct: 105 PYYDNSALFVGQQG-KYTSVDQLKGKNVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 160 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 219 Query: 239 NIVSWTH 245 + Sbjct: 220 QKFNTAL 226 >gi|209521051|ref|ZP_03269783.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209498507|gb|EDZ98630.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 270 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 45/231 (19%), Positives = 81/231 (35%), Gaps = 11/231 (4%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L F + +A L +I K G LK + F V + +G+D+D L+ A+ Sbjct: 26 LAFHAGVAHADTLDNITKAGVLKVAVPEDYPPFGSVGPDMKPQGYDIDTATLLAKAM--- 82 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K++ +P+N+ R LQ+ ++D++ + T RE + F QG Sbjct: 83 SVKLELVPVNSANRIPYLQTGKVDLVISSLGKTPEREKV--IDFSTAYAPYYQGVFGPAD 140 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 +S + L+G ++ G E+ L FE AA+ + + Sbjct: 141 IKVSGPADLTGKTVGATRGALEEIGLTQMAP----NATIKRFEDNNATIAAFLSGQVQLI 196 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A+ P +I SP + + + V Sbjct: 197 AAGNIVAAAILA--KNPPRRPEPKFVIKNSPCFVGMNKNEPRLQQKVDAAI 245 >gi|67923374|ref|ZP_00516855.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] gi|67854799|gb|EAM50077.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] Length = 261 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 84/232 (36%), Gaps = 10/232 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + L + + + A+ L +IK+RG L + + + +G ++ Sbjct: 7 RKLVLILTLGVFLNLGNNHLVIAATLEEIKERGKLLVAVKDNIRPLGFLDHKNQLQGLEI 66 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D R L+ I DP + P++ +ER + ++D+ R + F P Sbjct: 67 DLARQLAQDILGDPQALILQPVSNQERLQKVIDGEVDLAIARVTINSSRGRL--VNFSPY 124 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y DG G I I +V L + I V G++T + I + +E Sbjct: 125 YYLDGTGIIT-NNGRIRAVDHLRESKIAVLEGSSTIAVIRAELPQAK----LIGVKSYQE 179 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + +A+ D S L ++ LP +S L + +G Sbjct: 180 AMTLLETEKVEAFVADNSILTGWVQQYP---QYYRLPVRLSGEALGVVMPKG 228 >gi|307329669|ref|ZP_07608827.1| extracellular solute-binding protein family 3 [Streptomyces violaceusniger Tu 4113] gi|306884727|gb|EFN15755.1| extracellular solute-binding protein family 3 [Streptomyces violaceusniger Tu 4113] Length = 307 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 46/226 (20%), Positives = 84/226 (37%), Gaps = 10/226 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++ + RG L G+ E G + GFD++ R +S+++ P I++ Sbjct: 55 SSPTWRRAEHRGHLTVGVKEDQPYLGERDPATGRYSGFDIEIARMMSASLGFAPKTIRFQ 114 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + + R ALQS QID LR+ +G F + GQ ++ I Sbjct: 115 TIASANRETALQSGQIDYYVGTYTINPLRKRLVG--FAGPYFMAGQSLLVRTDENDIHGP 172 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+G ++C AG+T + + H + ++ + + DA T D + Sbjct: 173 ADLAGRTVCSVAGSTPLQRIQTDYPKA----HAVAYDTYSVCVDNLLSFQVDAVTTDNTI 228 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 L P E ++ SK P + + D + Sbjct: 229 LLGYAAKA--PEELKVVGRPFSKEPYGIGVPKRDNALRFALDDAIQ 272 >gi|209516018|ref|ZP_03264878.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. H160] gi|209503478|gb|EEA03474.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. H160] Length = 258 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 87/251 (34%), Gaps = 24/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L ++ + + K+ ++ G++ F NGD GFD Sbjct: 1 MKK--FALCVALAVMATGAMA---------KEWKTVRIGVDASYPPFESKAPNGDIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D RAL + + K ++ + AL++++ D + + T R + F Sbjct: 50 ADLTRALCAKM---NVKCVWVAQDLDGIIPALKARKFDAIISSLSVTDQR--REQIDFSD 104 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I + + L G + V+ G+T E +++ + ++ Sbjct: 105 KLFDAPARMIAKTGSPLLPTPESLKGKHVGVEQGSTQEQYAKAWWEPKG--VVVVSYQNQ 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISK----SPLAPAIIQGD 234 +++ A + R DA D A L R P++ A + +GD Sbjct: 163 DQVYADLTSGRLDAALQDEVQADASFLKTPRGKGFGWAGPEVNDPKTIGEGTAIGLRKGD 222 Query: 235 TEWYNIVSWTH 245 + + Sbjct: 223 GDLKAKFNQAL 233 >gi|311740950|ref|ZP_07714776.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium pseudogenitalium ATCC 33035] gi|311303986|gb|EFQ80063.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium pseudogenitalium ATCC 33035] Length = 337 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 87/223 (39%), Gaps = 15/223 (6%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 DI KRG L G++ + A +GD +GF+VD R ++ IF DP+K+ + + + + Sbjct: 86 DIVKRGRLIVGVDRSNNLMSYRDAASGDVRGFEVDIAREIARDIFGDPNKVDFRFIESSD 145 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R AL S +D++ R + RE + F ++ GI SV +G + Sbjct: 146 RVDALNSGAVDMIVRTMTISPERERDVA--FSIPYMSTQTRMLVLTNSGIKSVKDAAGKT 203 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C +T T+ ++ +V + A + ++ D D + L + Sbjct: 204 LCGVGASTALETIREHAPK----SDILVTRSWGDCLMALQLNQADGIVVDDALLSGMAAQ 259 Query: 208 NDRPSEHVILPDIISKSPLAPAII-----QGDTEWYNIVSWTH 245 + I+ + + A+ V+ T Sbjct: 260 DS---YTSIVGEPLETENYGVAVRRPSKQHDTRPLLRQVNSTL 299 >gi|209521610|ref|ZP_03270307.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209497964|gb|EDZ98122.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 262 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 90/253 (35%), Gaps = 17/253 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M++ +S++ L + + A + +G L+ GI F +G +GFD Sbjct: 1 MFRKLQLSLIVTAALVGSLGTVGA------QAQGTLRFGIEAAYPPFESKSPSGQLQGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + + ++ AL++++ D+++ + T R+ S+ +P Sbjct: 55 VDVGNAVCTKLGVK---CVWVENAFDGLIPALEARKFDVINSAMNITDKRKQSIEFT-KP 110 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I + V L G + V G++ E L ++ + ++ + Sbjct: 111 IYVVPIVMVARRGSGLLPDVKSLQGKRVGVLQGSSQEDFLKAHWANAG--VTVVSYQDQD 168 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDT 235 ++ A R DA + L E+ I+ +S + + D Sbjct: 169 QVYADLVGGRLDAAVQEAQTAQDGFLGKPAGHEYAIVGKPLSDPATLGEGTGWGVRKADK 228 Query: 236 EWYNIVSWTHYAM 248 V+ A+ Sbjct: 229 ALVAKVNAALDAL 241 >gi|307131836|ref|YP_003883852.1| histidine/lysine/arginine/ornithine ABC transporter periplasmic-binding protein [Dickeya dadantii 3937] gi|306529365|gb|ADM99295.1| periplasmic-binding component of an ABC superfamily histidine/lysine/arginine/ornithine transporter [Dickeya dadantii 3937] Length = 259 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 86/250 (34%), Gaps = 22/250 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L+ S L ++ K +K G + F A+G GFD Sbjct: 1 MKKMLKLLPLALVF-------AAGSALAEVPKN--IKIGTDPTYAPFESKDASGQLVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + L I + ++ + +L++K+ID + + T R +AF Sbjct: 52 IDLAKELCKRI---EANCTFVESDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFTD 106 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I ++ L G + V +T E Y++ + + ++ Sbjct: 107 KLYAANARLIAKKGSPILPTLEALKGKRVGVLQASTQESYANQYWQPKGVD--VVAYQNQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I A A R DA D A L E+ + L + + + Sbjct: 165 DLIYADLTAGRIDAAFQDEVAGSEGFLKQAAGKEYAFAGPAVKDDKLFGVGTGMGLRKNE 224 Query: 235 TEWYNIVSWT 244 TE + Sbjct: 225 TELKAALDKA 234 >gi|300902393|ref|ZP_07120376.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 84-1] gi|301305368|ref|ZP_07211463.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 124-1] gi|300405540|gb|EFJ89078.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 84-1] gi|300839386|gb|EFK67146.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 124-1] gi|315257896|gb|EFU37864.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 85-1] Length = 260 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + GI+ F + AN + GFD Sbjct: 18 MKKLVLAALLASFTFGASAAE-------------KINFGISATYPPFESIGANNEIVGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S ++F Sbjct: 65 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 120 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P V + L A+ + Sbjct: 175 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 232 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 233 LLEKLNNALAAI 244 >gi|257790426|ref|YP_003181032.1| extracellular solute-binding protein family 3 [Eggerthella lenta DSM 2243] gi|257474323|gb|ACV54643.1| extracellular solute-binding protein family 3 [Eggerthella lenta DSM 2243] Length = 276 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 78/243 (32%), Gaps = 14/243 (5%) Query: 13 IILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 ++L S +A G L G + G + V +G + GFD++ +A+ Sbjct: 20 VMLAGCSGGGDAQSADSAATDGSFTLAVGFDQGYPPYGYVGDDGQFTGFDLELAKAVCEK 79 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + + ++ P++ + + S I+ + F ++ Q + Sbjct: 80 MGWE---LKLEPIDWDAKDALIGSGTINCIWNGFTM---ENRENDYTFSEPYMYNEQVVV 133 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH---NMKYHPIVFERVEEIDAAYR 187 + K + L+G ++ Q + L D + Sbjct: 134 VKKDSDAKKLEDLAGKTVLTQVDSAALHVLEDEKGQKALADTFKELQTIGDYNNAFMQLE 193 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 + DA D+S A +P +V L + A +GDTE V+ A Sbjct: 194 SGMVDAVACDLSI--ASYQMAAKPDTYVKLGVLAP-ENYAVGFKKGDTELAKQVTDALKA 250 Query: 248 MVT 250 + Sbjct: 251 LDE 253 >gi|161507107|ref|YP_001577061.1| glutamine-binding protein precursor [Lactobacillus helveticus DPC 4571] gi|160348096|gb|ABX26770.1| Glutamine-binding protein precursor [Lactobacillus helveticus DPC 4571] Length = 272 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 86/233 (36%), Gaps = 10/233 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 L N ++ +K+ + G+ F G +GF++D AL+ + Sbjct: 19 ALTACGKRNNQNVYQKVKESKHIIWGVRADTRLFGLTNVKTGKIEGFEIDLAHALTKQML 78 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 + ++ A R L++ ID + T R + F + G ++ Sbjct: 79 GKDATASFVTTTANTRIPLLKNGNIDAVLATMTITPERAK--QVDFSKPYFPAGSSLLVP 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I +V L+G ++ GTT + + + ++ + +A +A++ Sbjct: 137 DNSKIKNVKDLNGETVLAVKGTTAVNDVHKFEPKA----RVLQYDDYGQAMSALKANQGV 192 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A T D L + + P + ++ + + +P A+ +G + + ++ Sbjct: 193 ALTTDNGLLAGIAQ--ENPG-YKLVGGVYNNAPYGIAVNKGQKDMVDHINKAL 242 >gi|282901104|ref|ZP_06309036.1| extracellular solute-binding protein, family 3 [Cylindrospermopsis raciborskii CS-505] gi|281194003|gb|EFA68968.1| extracellular solute-binding protein, family 3 [Cylindrospermopsis raciborskii CS-505] Length = 267 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 91/250 (36%), Gaps = 17/250 (6%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + L+ L ++ A+ + +I++RG++ + A G+ +G ++D Sbjct: 14 TILLFSCVLLPLPGIINTSLAATMQEIQERGYITIAVKDNTPPLAFRDKQGNLQGLEIDL 73 Query: 64 CRALSSAIFDD------PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + L+ + D ++++ P+ ER A+ + ++D+ T R + L+ Sbjct: 74 AKRLARDLLGDSPSSRVKLQVKFQPVTNVERLPAVFNHKVDLAIARVTATPSRSRIVSLS 133 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 I+ K I +S L+ ICV ++T + + + Sbjct: 134 IPYYYDGTA---IVTKNPAIQKLSDLNKRRICVLNYSSTIPHVKYAIP----QGELVGVN 186 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDT 235 E + DA D + + S++ IL D +S PL+ + + Sbjct: 187 SYLEAKKLLDNGQVDACAADSTVFQGWI--EPQYSQYKILLDRLSVEPLSIVMPKGLQYD 244 Query: 236 EWYNIVSWTH 245 + V+ Sbjct: 245 DLRTRVNDLM 254 >gi|323529254|ref|YP_004231406.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323386256|gb|ADX58346.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 277 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 85/227 (37%), Gaps = 11/227 (4%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + S L + +RG L+ G F +G G+DVD + L+ + + Sbjct: 34 SAGTDSTLKQVLQRGTLRVGDCLTFAPFGFYNKDGQPDGYDVDLAKELAKQMGVKLEVVN 93 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + R LQ+ ++D++ N L R + F + +++K GI S Sbjct: 94 ---TTSANRIPNLQTSKVDVVFCNFTRNLERAKEIA--FTNPYVVASEALLVNKSSGIKS 148 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 ++ ++ +I G+T D ++ NM+ F+ + A + + DA D + Sbjct: 149 INDMANRTIATVKGSTN----GDEVRSLNMQVKIQEFDSSQAAILAVKQGQADAMIEDNN 204 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 L P V ++ A + GD W N ++ + Sbjct: 205 FLAYQASL--DPDLTVTNEALVPLEYNAFGVKAGDQVWLNYLNLFLF 249 >gi|30019027|ref|NP_830658.1| cystine-binding protein [Bacillus cereus ATCC 14579] gi|229042722|ref|ZP_04190462.1| Extracellular solute-binding protein family 3 [Bacillus cereus AH676] gi|229108460|ref|ZP_04238077.1| Extracellular solute-binding protein family 3 [Bacillus cereus Rock1-15] gi|229126283|ref|ZP_04255301.1| Extracellular solute-binding protein family 3 [Bacillus cereus BDRD-Cer4] gi|229143576|ref|ZP_04272001.1| Extracellular solute-binding protein family 3 [Bacillus cereus BDRD-ST24] gi|229149191|ref|ZP_04277432.1| Extracellular solute-binding protein family 3 [Bacillus cereus m1550] gi|296501587|ref|YP_003663287.1| cystine-binding protein [Bacillus thuringiensis BMB171] gi|29894569|gb|AAP07859.1| Cystine-binding protein [Bacillus cereus ATCC 14579] gi|228634390|gb|EEK90978.1| Extracellular solute-binding protein family 3 [Bacillus cereus m1550] gi|228639932|gb|EEK96337.1| Extracellular solute-binding protein family 3 [Bacillus cereus BDRD-ST24] gi|228657275|gb|EEL13095.1| Extracellular solute-binding protein family 3 [Bacillus cereus BDRD-Cer4] gi|228675087|gb|EEL30314.1| Extracellular solute-binding protein family 3 [Bacillus cereus Rock1-15] gi|228726662|gb|EEL77879.1| Extracellular solute-binding protein family 3 [Bacillus cereus AH676] gi|296322639|gb|ADH05567.1| cystine-binding protein [Bacillus thuringiensis BMB171] Length = 265 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 35/254 (13%), Positives = 76/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + + Sbjct: 116 QKKYDFSKPYISSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNGAEI 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + + R D +T + L + ++ I+ S Sbjct: 172 EGVE--GFSQAAELLASGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G + V Sbjct: 229 KGSDKLVQEVDKAL 242 >gi|300870611|ref|YP_003785482.1| polar amino acid uptake ABC transporter amino acid-binding protein [Brachyspira pilosicoli 95/1000] gi|283462653|gb|ADB22527.1| oligopeptide-binding protein 5 [Brachyspira pilosicoli] gi|300688310|gb|ADK30981.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Brachyspira pilosicoli 95/1000] Length = 271 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 89/229 (38%), Gaps = 8/229 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S+ + L +K+ G L G++ L NG+ GFD+D R +++ + + Sbjct: 28 SSADNSLQKVKENGKLVLGLDDTLAPMGFRDDNGEIVGFDIDLAREVANRLGVELEA--- 84 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISS 139 P++ L+L+ +D++ R + F ++ + + I+S Sbjct: 85 KPIDWSSAILSLKKGDVDVIWNGFAVNESR--KQQVNFTKPYLYNRLMIAKYSDRDDINS 142 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 +L G + VQ+G++ TL + + +K ++ A R DA D Sbjct: 143 KEELKGKIVGVQSGSSNYETLVNDPVSKEIK-EIRQYDSYVNAFLDLEAKRIDAVIVDE- 200 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + ++ + ++ I+ L+ + + DTE N + M Sbjct: 201 IVARYYISKENADFTLLEDKPITSQYLSVGLRKTDTELLNAIDKALDDM 249 >gi|146310956|ref|YP_001176030.1| glutamine ABC transporter periplasmic protein [Enterobacter sp. 638] gi|145317832|gb|ABP59979.1| L-glutamine-binding protein [Enterobacter sp. 638] Length = 247 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 82/245 (33%), Gaps = 21/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSVLKVSLAALTLAFAVSSQAAD---------KLVVATDTAFVPFEFKQGD-KYVGFDVD 51 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K ID+ T R+ + F Sbjct: 52 LWAAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITEERKK--AIEFSDGY 106 Query: 123 YFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 107 YKSGLLLMVKADNNDVKSVKDLDGKIVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 162 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + + A +G E N V Sbjct: 163 AYMELGTNRADAVLHDTPNILYFIKTAGNGK-FKAVGESLEAQQYGIAFPKGSDELRNKV 221 Query: 242 SWTHY 246 + Sbjct: 222 NGALK 226 >gi|283786384|ref|YP_003366249.1| lysine-arginine-ornithine-binding periplasmic protein [Citrobacter rodentium ICC168] gi|282949838|emb|CBG89461.1| lysine-arginine-ornithine-binding periplasmic protein [Citrobacter rodentium ICC168] Length = 260 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 94/279 (33%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L+I S S A++ ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSVL--ALSLLIGLSASVSGYAALPE------TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E D +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDALKGKHVGVLQGSTQEAYANDNWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + A R DA D A L ++ + + + D Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKDYAFAGPSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E A A ++++K + +V Sbjct: 226 GELKA-------AFDKALADLRQDGTYDKMAKKYFDFNV 257 >gi|229820930|ref|YP_002882456.1| extracellular solute-binding protein family 3 [Beutenbergia cavernae DSM 12333] gi|229566843|gb|ACQ80694.1| extracellular solute-binding protein family 3 [Beutenbergia cavernae DSM 12333] Length = 294 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 74/205 (36%), Gaps = 7/205 (3%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 G + GI G N ++ GFDVD ++ + +I+++ + +R Sbjct: 50 AEGTINIGIKFDQPGLGFRDGN-EYTGFDVDVATYVACQLGYAEDQIEWVESPSAQRENM 108 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICV 150 LQ+ Q+D++ T R+ + F + GQ ++ I+ L G ++C Sbjct: 109 LQTGQVDMIFATYSITDERKEVVA--FAGPYFVAGQDLLVRADETDIAGPEDLEGRNLCS 166 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 G+T+ + D + + + + A + DA T D L L Sbjct: 167 VTGSTSAQRIKDEYAE---GTNLVEQPGYADCVTVLLAGQVDAVTTDDIILAGLAAQPAN 223 Query: 211 PSEHVILPDIISKSPLAPAIIQGDT 235 + ++ S+ I Q Sbjct: 224 QGQLTVVGAPFSEENYGVGIPQDSE 248 >gi|209695039|ref|YP_002262968.1| extracellular solute-binding protein [Aliivibrio salmonicida LFI1238] gi|208008991|emb|CAQ79219.1| extracellular solute-binding protein [Aliivibrio salmonicida LFI1238] Length = 253 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 92/263 (34%), Gaps = 19/263 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K CL +L S S A L DI++ G ++ G F+ ++ G+D Sbjct: 1 MQKKLL----CLSVLLAASCSAQADRLDDIQESGVIRVGTTGDYKPFSSFDGK-NYTGYD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + ++ + + K L + + DI + R++ Sbjct: 56 IDVAKHIADQLGVK---LELVKTSWKNLIPDLNADKYDIAMGGITRKMQRQLHAEQTQGY 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +T+ K +++ +++ + V + + AH +E Sbjct: 113 MTFGKCFLVAKGKADAFNTIDKVNMKEVRVGINIGGTNEI--FADAHLQNATFTRYENNL 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ A + D + + T+ R E +KS + +G+ E N Sbjct: 171 DVPQAVATGKVDVMVTETPEALFYQATDKR-LEAARCETPFTKSQFGYLVPKGEQELLNT 229 Query: 241 VSWTHYAMVTAEELGITQKNINQ 263 V++ + KNI++ Sbjct: 230 VNFIMD--------EMKLKNIDE 244 >gi|167031323|ref|YP_001666554.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166857811|gb|ABY96218.1| extracellular solute-binding protein family 3 [Pseudomonas putida GB-1] Length = 250 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 89/252 (35%), Gaps = 22/252 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 YK F ++ +++ + + L+ GI F A+G+ GFD Sbjct: 4 YKKFLLAAAATLVMSANAMAAE-----------KLRMGIEAAYPPFNNKDASGNVVGFDK 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D AL + + + + + AL +K+ D L + T R+ + F Sbjct: 53 DIGDALCAKMKVE---CSVVTSDWDGIIPALNAKKFDFLVSSLSITDERK--QAVDFTEP 107 Query: 122 TYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K + + L G SI Q T L D FK +++ E Sbjct: 108 YYSNKLQFIAPKNVDFKTDAASLKGKSIGTQRATLAGTYLEDNFK----GVDVKLYDTQE 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + R D D Y + D + ++ + A+ +GDT+ + Sbjct: 164 NAYLDLVSGRIDGILADKYVQYEWLKSKDGSNFEFKGEPVMDSDKIGIAVRKGDTKLRDD 223 Query: 241 VSWTHYAMVTAE 252 ++ A + A+ Sbjct: 224 LNKAL-AEIKAD 234 >gi|319897440|ref|YP_004135637.1| bacterial extracellular solute-binding protein [Haemophilus influenzae F3031] gi|317432946|emb|CBY81313.1| Bacterial extracellular solute-binding protein [Haemophilus influenzae F3031] Length = 257 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 80/259 (30%), Gaps = 19/259 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L + F++FS I ++K L G F +G GFD Sbjct: 1 MKKLLFTTALLTGAIAFSTFSHAGEIADRVEKTKTLLVGTEGTYAPFTFHSKDGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ ++ + K+++ + L +K+ D+++ T E + Sbjct: 61 VEIIEKVAEKLG---LKVEFKETAWDGMYAGLNAKRFDVIANQT--NPSPERLKKYDYSA 115 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + I + S L G A + D + + + Sbjct: 116 PYNYSAGVIVTKENNDSIKTFSDLKGKKSAQSATSNWSKDARD------NGAIIVTMDSL 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A + R D+ D A+ + + + K P ++G+ Sbjct: 170 AQNLEAVKQERVDSTVNDKLAVLDYFKKQPNAGLKIAV-ESDKKIPTGFVSLKGEEALIA 228 Query: 240 IVSWTHYAMVTAEELGITQ 258 V+ EEL Sbjct: 229 KVNKAL------EELRQDG 241 >gi|62180926|ref|YP_217343.1| lysine/arginine/ornithine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224583157|ref|YP_002636955.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62128559|gb|AAX66262.1| ABC superfamily (bind_prot), lysine/arginine/ornithine transport protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224467684|gb|ACN45514.1| lysine-arginine-ornithine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322715404|gb|EFZ06975.1| lysine/arginine/ornithine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 260 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 91/279 (32%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + + + ++ G +T F+ A G++ GFD Sbjct: 1 MKKTVLALSLLIGLGATAASYAALPQ--------TVRIGTDTTYAPFSSKDAKGEFIGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I ++ L G + V G+T E D ++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + A R DA D A L E+ + + + D Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGIGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE EL ++++K + +V Sbjct: 226 TELKAAFDKALT------ELRQDGT-YDKMAKKYFDFNV 257 >gi|46199113|ref|YP_004780.1| amino acid ABC transporter, binding protein [Thermus thermophilus HB27] gi|46196737|gb|AAS81153.1| amino acid ABC transporter, binding protein [Thermus thermophilus HB27] Length = 254 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 75/223 (33%), Gaps = 11/223 (4%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +IK+ G ++ G F GF+VD A++ + P +++ + Sbjct: 24 EEIKRSGEIRIGTEGAFPPFNYFDERNQLTGFEVDLGNAIAERLGLKP---RWIAQSFDT 80 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 + L + D + + T R + F Y G + K + L G Sbjct: 81 LLIQLNQGRFDFVIASHGITEERAR--AVDFTNPHYCTGGVIVSRKGGP-RTAKDLQGKV 137 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + VQ GTT ++R + A R D + D + Sbjct: 138 VGVQVGTTYMEAAQKIPGIK----EVRTYQRDPDALQDLLAGRIDTWITDRFV-AKEAIK 192 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + + + +++ + +A A+ +G+ + ++ ++ Sbjct: 193 ERKLENTLQVGELVFQERVAMAVAKGNKSLLDALNRALAELMQ 235 >gi|306833385|ref|ZP_07466512.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus bovis ATCC 700338] gi|304424155|gb|EFM27294.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus bovis ATCC 700338] Length = 280 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 76/258 (29%), Gaps = 17/258 (6%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVK 51 M K V +L L+ + +++ K G + G + V Sbjct: 1 MKFKKVLVGVLALVSTLTLAACSSSSSKKATSTDQWDTYVKNGEITIGFDNTFVPMGYED 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G GFD+D A+ +++ +N + L + ID++ T R Sbjct: 61 EDGSNVGFDIDLANAVFKEYG---ITVKWQSINWDMKETELNNGTIDLIWNGYSITDER- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHN 168 S + F + Q + K GI+S + + + Q+G++ + K Sbjct: 117 -SEKVLFTDPYMVNEQVLVTKKSSGITSFADMKDKVLGAQSGSSGYDAFTSHPEVLKDIV 175 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 +E + + R D D + I+ A Sbjct: 176 SGGDATQYETFTQALIDLKNDRIDGLLIDKVYANYYLEQEGELDNYNIISSEFDGEDFAV 235 Query: 229 AIIQGDTEWYNIVSWTHY 246 + D ++ Sbjct: 236 GARKADKTLVKKINQAFK 253 >gi|153011067|ref|YP_001372281.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151562955|gb|ABS16452.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 266 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 78/231 (33%), Gaps = 11/231 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 + DIK G +K G+ F + + + G+D D + L+ + D + + Sbjct: 28 QTVDDIKSAGKIKIGMLVDFPPFGIMNTSNEPDGYDADVAKLLAKELGVDAQIVP---VT 84 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R LQS Q+D+L + T R + F G K ++ +LS Sbjct: 85 GPNRIPYLQSGQVDVLVASLGITEERAK--SVDFSQPYAGISIGVFGPKDTVVTKPEELS 142 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G SI V +T + + + F+ A + + + + Sbjct: 143 GKSIGVARASTQDTAVTKVAPQ---DANIRRFDDDASAVQALLSGQVELIGLSNVVAAEI 199 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + I +S+ A+ +G TE V+ + EL Sbjct: 200 EKAAPGRYDQKI---QLSQQVQGIAVRKGATEMLEFVNKFIEKAKSDGELN 247 >gi|74311404|ref|YP_309823.1| arginine 3rd transport system periplasmic binding protein [Shigella sonnei Ss046] gi|73854881|gb|AAZ87588.1| arginine 3rd transport system periplasmic binding protein [Shigella sonnei Ss046] gi|323165793|gb|EFZ51579.1| arginine-binding periplasmic protein 2 [Shigella sonnei 53G] Length = 243 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 82/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S ++F Sbjct: 48 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDSVISGMDITPER--SKQVSFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + T P V + L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNNALAAI 227 >gi|15830197|ref|NP_308970.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 str. Sakai] gi|168750048|ref|ZP_02775070.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC4113] gi|168756658|ref|ZP_02781665.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC4401] gi|168763286|ref|ZP_02788293.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC4501] gi|168767374|ref|ZP_02792381.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC4486] gi|168776405|ref|ZP_02801412.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC4196] gi|168779416|ref|ZP_02804423.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC4076] gi|168787085|ref|ZP_02812092.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC869] gi|168799854|ref|ZP_02824861.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC508] gi|195936908|ref|ZP_03082290.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 str. EC4024] gi|208809343|ref|ZP_03251680.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC4206] gi|208815419|ref|ZP_03256598.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC4045] gi|208822095|ref|ZP_03262414.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC4042] gi|209400027|ref|YP_002269532.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC4115] gi|217324548|ref|ZP_03440632.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. TW14588] gi|254792059|ref|YP_003076896.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 str. TW14359] gi|261225513|ref|ZP_05939794.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 str. FRIK2000] gi|261258518|ref|ZP_05951051.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 str. FRIK966] gi|13360402|dbj|BAB34366.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 str. Sakai] gi|187768247|gb|EDU32091.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC4196] gi|188015730|gb|EDU53852.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC4113] gi|189002772|gb|EDU71758.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC4076] gi|189356275|gb|EDU74694.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC4401] gi|189363585|gb|EDU82004.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC4486] gi|189366502|gb|EDU84918.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC4501] gi|189373030|gb|EDU91446.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC869] gi|189377718|gb|EDU96134.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC508] gi|208729144|gb|EDZ78745.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC4206] gi|208732067|gb|EDZ80755.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC4045] gi|208737580|gb|EDZ85263.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC4042] gi|209161427|gb|ACI38860.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC4115] gi|217320769|gb|EEC29193.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. TW14588] gi|254591459|gb|ACT70820.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 str. TW14359] gi|320192656|gb|EFW67297.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. EC1212] gi|320637729|gb|EFX07521.1| Arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 str. G5101] gi|320642853|gb|EFX12054.1| Arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H- str. 493-89] gi|320648310|gb|EFX16965.1| Arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H- str. H 2687] gi|320654147|gb|EFX22215.1| Arginine 3rd transport system periplasmic binding protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659771|gb|EFX27327.1| Arginine 3rd transport system periplasmic binding protein [Escherichia coli O55:H7 str. USDA 5905] gi|320664241|gb|EFX31392.1| Arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 str. LSU-61] gi|326338247|gb|EGD62076.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. 1125] gi|326346224|gb|EGD69962.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli O157:H7 str. 1044] Length = 243 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN GFD Sbjct: 1 MKKLVLAALLASCAFGASAAE-------------KINFGVSATYPPFESMDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T + S ++F Sbjct: 48 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITP--DRSKQVSFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + T P V + L A+ + Sbjct: 158 NAFIDLKNSRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNNALAAI 227 >gi|190892105|ref|YP_001978647.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] gi|190697384|gb|ACE91469.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] gi|327189351|gb|EGE56519.1| putative amino acid ABC transporter, substrate-binding protein [Rhizobium etli CNPAF512] Length = 257 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 89/261 (34%), Gaps = 23/261 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + F + + + LF S + G ++ F V A+G +GFD+D Sbjct: 6 RIFAAASIAAMSLFAGSAMADGE---------KYVIGTDSTYPPFEFVDASGTIQGFDID 56 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +AL + + ++ ++ + AL +K+ D++ + T R + F Sbjct: 57 ITKALCAEM---KAECSFVSTDWDGIIPALNAKKFDMIVSSMSITPERLKL--VDFSNKY 111 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y + K I+ V+ L G I Q TT + ++ +E Sbjct: 112 YNTPPAIAVPKDSKITDVAGLKGKVIGAQTSTTHANYAEKHLA----DTELKLYPTADEY 167 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWY 238 + R DA D+ L ++ ++ + K AI +GD Sbjct: 168 KLDVSSGRVDAVIDDVVVLSEWVKSDAGACCKILTTLPVDKEINGNGAGIAIRKGDP-LK 226 Query: 239 NIVSWTHYAMVTAEELGITQK 259 ++ A+ + E Q Sbjct: 227 EKLNTAIAAIRASGEYKKIQD 247 >gi|317401661|gb|EFV82286.1| amino acid ABC transporter periplasmic amino acid-binding protein [Achromobacter xylosoxidans C54] Length = 302 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 85/234 (36%), Gaps = 8/234 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS----AIFDDPSKIQY 80 S L I+ G + G V FA + N G+ V+ C+ ++ A+ ++Y Sbjct: 25 SRLDKIRDTGVITIGHPETSVPFAYLDGNQKPIGYTVEICQEIAQHIKTALKLPKLDVRY 84 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--S 138 P + R L + ID+ NT L R ++F P T+ + K G+ + Sbjct: 85 NPTTSATRIPLLANGTIDLECGNTTNNLERHKL--VSFAPTTFVAQVVLVARKDGGVDPN 142 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 +++ G +I QAG T ++ N+ + E + R D Sbjct: 143 NLASFRGKTIAAQAGGQTFKLISRLNAEGNLGISMAPTKDTAETLLMVESGRAAGSANDD 202 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 Y + ++ P VI + +P + D + +V M+ + Sbjct: 203 GIAYGVVASSKNPDVFVIGTKGLELAPYGIMQPKDDPAFKKVVDDAVLDMMKSG 256 >gi|16765682|ref|NP_461297.1| lysine/arginine/ornithine transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161612911|ref|YP_001586876.1| hypothetical protein SPAB_00617 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167993042|ref|ZP_02574137.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168237379|ref|ZP_02662437.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168242479|ref|ZP_02667411.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168261623|ref|ZP_02683596.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465935|ref|ZP_02699805.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168817909|ref|ZP_02829909.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194446318|ref|YP_002041618.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449415|ref|YP_002046410.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194735350|ref|YP_002115425.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197248703|ref|YP_002147315.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264781|ref|ZP_03164855.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200389109|ref|ZP_03215721.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929153|ref|ZP_03220296.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|238912365|ref|ZP_04656202.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|20141196|sp|P02911|ARGT_SALTY RecName: Full=Lysine-arginine-ornithine-binding periplasmic protein; Short=LAO-binding protein; Flags: Precursor gi|16420898|gb|AAL21256.1| lysine/arginine/ornithine transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161362275|gb|ABX66043.1| hypothetical protein SPAB_00617 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404981|gb|ACF65203.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407719|gb|ACF67938.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194710852|gb|ACF90073.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631170|gb|EDX49730.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197212406|gb|ACH49803.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243036|gb|EDY25656.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289681|gb|EDY29044.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199606207|gb|EDZ04752.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204321697|gb|EDZ06896.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205328786|gb|EDZ15550.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205338490|gb|EDZ25254.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205344716|gb|EDZ31480.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205349521|gb|EDZ36152.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|267994455|gb|ACY89340.1| lysine/arginine/ornithine transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158913|emb|CBW18426.1| lysine-arginine-ornithine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913346|dbj|BAJ37320.1| lysine/arginine/ornithine ABC transporter substrate binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320086790|emb|CBY96562.1| Histidine-binding periplasmic protein HBP; Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321222944|gb|EFX48015.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322617100|gb|EFY14006.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617594|gb|EFY14493.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624776|gb|EFY21605.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630326|gb|EFY27096.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634506|gb|EFY31239.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639217|gb|EFY35909.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640080|gb|EFY36747.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645700|gb|EFY42224.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652064|gb|EFY48427.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656236|gb|EFY52533.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659388|gb|EFY55635.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665848|gb|EFY62031.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669913|gb|EFY66054.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673898|gb|EFY69995.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678657|gb|EFY74713.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683548|gb|EFY79562.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687623|gb|EFY83593.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323130686|gb|ADX18116.1| lysine/arginine/ornithine transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323193542|gb|EFZ78747.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198449|gb|EFZ83551.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204561|gb|EFZ89564.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208501|gb|EFZ93440.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213639|gb|EFZ98428.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218326|gb|EGA03036.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222919|gb|EGA07268.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224506|gb|EGA08788.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232321|gb|EGA16424.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235645|gb|EGA19729.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323241195|gb|EGA25231.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244937|gb|EGA28939.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250056|gb|EGA33950.1| ABC transporter lysine/arginine/ornithine binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253840|gb|EGA37665.1| ABC transporter lysine/arginine/ornithine binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323254977|gb|EGA38768.1| ABC transporter lysine/arginine/ornithine binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259836|gb|EGA43468.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264143|gb|EGA47650.1| ABC transporter lysine/arginine/ornithine binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270841|gb|EGA54279.1| ABC transporter lysine/arginine/ornithine binding periplasmic protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 260 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 91/279 (32%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + + + ++ G +T F+ A G++ GFD Sbjct: 1 MKKTVLALSLLIGLGATAASYAALPQ--------TVRIGTDTTYAPFSSKDAKGEFIGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I ++ L G + V G+T E D ++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + A R DA D A L E+ + + + D Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE EL ++++K + +V Sbjct: 226 TELKAAFDKALT------ELRQDGT-YDKMAKKYFDFNV 257 >gi|294637081|ref|ZP_06715395.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Edwardsiella tarda ATCC 23685] gi|291089709|gb|EFE22270.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Edwardsiella tarda ATCC 23685] Length = 248 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 79/249 (31%), Gaps = 20/249 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + + + L F + A L +T V F K + + GFD+D Sbjct: 2 KSLLKASVAALALTFALGAQAAE--------KPLIVATDTAFVPFEFKKGD-KYVGFDID 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + + P++ ALQ+ +D+ T R+ + F Sbjct: 53 LWEAIAKQLHLNY---TLKPMDFSGIIPALQTHNVDLALAGISITEERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ I + L G + V++GT DY KAH F ++ Sbjct: 108 YNSGLMVMVKSDNAEIKGIKDLDGKVVAVKSGTAGV----DYAKAHVKSKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 R DA D + T + + D + A +G V Sbjct: 164 AYLELATGRADAVLHDTPNILYFIQTAGNG-QFKAVGDSLEAQAYGIAFPKGSDALREQV 222 Query: 242 SWTHYAMVT 250 + + Sbjct: 223 NGALKTLKE 231 >gi|227547864|ref|ZP_03977913.1| amino acid ABC superfamily ATP binding cassette transporter binding protein [Corynebacterium lipophiloflavum DSM 44291] gi|227080049|gb|EEI18012.1| amino acid ABC superfamily ATP binding cassette transporter binding protein [Corynebacterium lipophiloflavum DSM 44291] Length = 332 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 92/226 (40%), Gaps = 10/226 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 +T A + D+ +RG + G++ + GD +GF++D R +S IF DP ++ Sbjct: 75 ATPAERIPDVVERGRIVVGVDQSQYLLSYRDVTAGDLRGFEIDLAREVSRDIFGDPDRVD 134 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + + +++R +LQ+ ++DI+ R T R + F ++ + +GISS Sbjct: 135 FRFVGSQQRAQSLQNGEVDIVIRTMSVTPTR--VASVDFSTPYLTSYVRLLVPRDRGISS 192 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G ++CV G+ L + + + + A + DA D + Sbjct: 193 EDDLPGTTVCVVDGS----NLVQLAREIAPQSTILRTRTWADCLMATQQFHADAILADGA 248 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L + + ILP + A +GD V+ T Sbjct: 249 ILAGMVSQDP---YTTILPRRYGRQQYAVGTHKGDAGMTMQVNSTM 291 >gi|37528308|ref|NP_931653.1| hypothetical protein plu4487 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787746|emb|CAE16859.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 257 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 81/252 (32%), Gaps = 15/252 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K ++L +I F ++S +A S L +IK G K F +G GFD+ Sbjct: 2 KMLLTALLAGVIQFGIAYSAHAESGLDNIKSAGVFKIATEGTYPPFTYHDVSGALTGFDI 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D R ++ + + L +K+ D + T R+ F Sbjct: 62 DIGREIARRLNVKAE---FTEGKWDGLIAGLDAKRYDAVLNQVAITPERKK--KYDFSGP 116 Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I K I + S L G + + T+ LA +F A + E Sbjct: 117 YIISKAVLITRKNNDSIKTFSDLKGKTSS-HSLTSNYAQLAKHFGA-----EIVPTEGFN 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + R DA D + + V+ + + I +G+ E Sbjct: 171 QAIDLVATGRADATINDNLSYLDFRKHKPNAPVKVVASEPNGDL-VGVLIRKGEPELQAA 229 Query: 241 VSWTHYAMVTAE 252 + A + A+ Sbjct: 230 IDKAL-ADIKAD 240 >gi|328887000|emb|CCA60239.1| amino acid ABC transporter, amino acid-binding protein [Streptomyces venezuelae ATCC 10712] Length = 291 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 80/256 (31%), Gaps = 13/256 (5%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 + L F+ A+ + + GI G +G + GFDVD ++ + Sbjct: 29 LSLTSAGFANGAAAVPADHGGDKITVGIKYDQPGIGLKTPDGTYTGFDVDVATYIAKELG 88 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 DPS I + + +R LQ +D ++ + R + F Q ++ Sbjct: 89 HDPSDIVWKEAKSADRETLLQRGDVDFIAASYSINDERAK--KVDFAGPYLLAHQDVLIR 146 Query: 133 KKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 I S L+ +C G+T+ + + + E Sbjct: 147 ADDDSIKKPSDLNNKKLCSVTGSTSAQNVKEKIA---PDAQLQEYGGYSECLTGLENGVI 203 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY----- 246 DA T D S L + + + +S + +G ++ + ++ Sbjct: 204 DALTTDDSILAGYASQDQFKGKFKLGGFKLSNENYGIGVQKG-SDLKDKINTALEKMVAD 262 Query: 247 -AMVTAEELGITQKNI 261 + A E N Sbjct: 263 GSWDKAVEKNFGPANY 278 >gi|295706523|ref|YP_003599598.1| arginine ABC transporter arginine-binding protein ArtP [Bacillus megaterium DSM 319] gi|294804182|gb|ADF41248.1| arginine ABC transporter, arginine-binding protein ArtP [Bacillus megaterium DSM 319] Length = 269 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 75/220 (34%), Gaps = 17/220 (7%) Query: 1 MY-KDFF--VSILCLIILFFTSFSTNASILG-----DIKKRGFLKCGINTGLVGFAEVK- 51 M K + +I L + D K + L G + F + Sbjct: 1 MKLKKWLSVTAIGLLAAGVLAACGAGEGTSNGGASNDDKDKKVLVMGTSADYPPFEYIDT 60 Query: 52 --ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 + + GFDVD + + + D +Q + ALQS ++D++ T Sbjct: 61 AKGDSEAIGFDVDLAKTIGKKLGYD---VQVKDMEFGGLIPALQSNKVDLVLAGMTPTEK 117 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ + F + Y + K I + +L G ++ VQ + + K + Sbjct: 118 RKK--NVDFSDVYYEAKNMIVSKKDAPIKNAEELKGKTVGVQTSSIQADEAKEIAKEVD- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + +R+ E+ +++R DA + + + Sbjct: 175 GVNVTTRDRIPELIQEMKSNRIDAAIIEDTVAKGYVNKDK 214 >gi|229593008|ref|YP_002875127.1| putative ABC transporter substrate-binding exported protein [Pseudomonas fluorescens SBW25] gi|229364874|emb|CAY52937.1| putative ABC transport system, substrate-binding exported protein [Pseudomonas fluorescens SBW25] Length = 253 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 84/252 (33%), Gaps = 18/252 (7%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +S L +L + + +A L+ F V + GF Sbjct: 1 MKKPLSTISTASLWLLCTVTGAAHAET---------LRIASEGAYPPFNYVDSTNTLHGF 51 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D AL + ++ + + AL +K+ D + + + T R+ +AF Sbjct: 52 DIDIANALCERM---KVTCTFVTQDWEGMIPALLAKKYDAIVASMNVTEERKK--KIAFT 106 Query: 120 PITYFDGQGFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + GI G ++ Q+ +T + + + A ++ Sbjct: 107 NRYYRTPLSVAVANDSGIRDAQTDFKGLTVGAQSYSTQAIYAEERYGAAG--ATVKLYPS 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E + A R D D L A + + V+ + + A A+ Q D Sbjct: 165 QDEAASDLAAGRLDGVIADKYPLLAWVESAGKDCCKVLGDIYGTNTDAAIAVRQEDVALR 224 Query: 239 NIVSWTHYAMVT 250 ++ +V Sbjct: 225 ERLNRALDEIVA 236 >gi|15890697|ref|NP_356369.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15158966|gb|AAK89154.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 278 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 90/251 (35%), Gaps = 13/251 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCR 65 +++ ++ + A L I L+C +V FA + GFDVD C+ Sbjct: 6 LTLTAAVLGVAAASPAMADQLDTITANKVLRCATFADVVPFAAPDPKTREMAGFDVDLCK 65 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++ + P++ + R ++ ++DI N +T R + F Y Sbjct: 66 AIAKELGVKAE---IKPVSVEARVPEVKLGRVDITVANLAYTQSRAEQIQ--FSDPYYLA 120 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + I+ + S G + G+T+E+++ K P+ F+ A Sbjct: 121 KEMLIVPVEDAGKKKSDYEGQRVASTKGSTSEMSI------KLNKSEPLTFQDTASAYLA 174 Query: 186 YRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + + + ++ +K + + ++ + + P+ + + + ++ Sbjct: 175 VQQGKARGMVANTMTTTKFVKESKTKGKPMRMIEEPMLYQPIGIGMAKDNPALTAKINEI 234 Query: 245 HYAMVTAEELG 255 + E+ Sbjct: 235 LRKLDADGEIN 245 >gi|330968064|gb|EGH68324.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 254 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 81/258 (31%), Gaps = 29/258 (11%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + + +F+ LK GI F A+G G Sbjct: 1 MKTYKKILLVAAATLAFSSGAFAE------------KLKMGIEGAYPPFNNKDASGQVVG 48 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD + +AL + + + + + + AL +++ D L + T R + F Sbjct: 49 FDYEIGQALCAKMKVE---CEVVTSDWDGIIPALNAQKFDFLISSLSITEER--KQVVDF 103 Query: 119 RPITYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 Y + F+ K I + L+G S+ Q T L D + Sbjct: 104 TDPYYSNKLQFLAPKTSSIDVSPIEKAKESLTGKSVGAQRSTLAATWLEDKLE----IMD 159 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +++ E + R DA D Y + + ++ + A+ + Sbjct: 160 AKLYDTQENAFLDLLSGRVDAMLADKYVSYEWLKSEAGQNFEFKGEPVVENDKIGIAVRK 219 Query: 233 GDTEWYNIVSWTHYAMVT 250 GD ++ ++ Sbjct: 220 GDDPLRERLNVALKEVIA 237 >gi|330874238|gb|EGH08387.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 254 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 81/258 (31%), Gaps = 29/258 (11%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + + +F+ LK GI F A+G G Sbjct: 1 MKTYKKILLVAAATLAFSSGAFAE------------KLKMGIEGAYPPFNNKDASGQVVG 48 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD + +AL + + + + + + AL +++ D L + T R + F Sbjct: 49 FDYEIGQALCAKMKVE---CEVVTSDWDGIIPALNAQKFDFLISSLSITEER--KQVVDF 103 Query: 119 RPITYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 Y + F+ K I + L+G S+ Q T L D + Sbjct: 104 TDPYYSNKLQFLAPKTSSIDVSSIEKAKESLTGKSVGAQRSTLAATWLEDKLE----IMD 159 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +++ E + R DA D Y + + ++ + A+ + Sbjct: 160 AKLYDTQENAFLDLLSGRVDAMLADKYVSYEWLKSEAGQNFEFKGEPVVENDKIGIAVRK 219 Query: 233 GDTEWYNIVSWTHYAMVT 250 GD ++ ++ Sbjct: 220 GDDPLRERLNVALKEVIA 237 >gi|325970769|ref|YP_004246960.1| ABC transporter periplasmic protein [Spirochaeta sp. Buddy] gi|324026007|gb|ADY12766.1| ABC-type transporter, periplasmic subunit family 3 [Spirochaeta sp. Buddy] Length = 271 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 77/240 (32%), Gaps = 11/240 (4%) Query: 13 IILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 LF A S L + +G G++ G+ GFDVD + ++ Sbjct: 16 ASLFAAGTKEQAIGGDSSLDKVMSKGQFVMGLDDNFPPMGFRNEKGEIVGFDVDLAKEVT 75 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + ++ P++ + L + ID + T R+ + F + Q Sbjct: 76 KRMG---VTLKLQPIDWNAKEQELNTGNIDCIWNGFTITEERK--QAMTFTAPYIHNAQV 130 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ ++++ LSG S+ QAG++ + I F+ Sbjct: 131 VVVRDDSPYTTLASLSGKSVGYQAGSSASSAIDASPDFKKSIKTFIEFKENLTGLMDLEI 190 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 DA D A IL + ++ +GD + + V AM Sbjct: 191 GGIDALVVD--VTVANDNIKRSGKAFRILTEELAPEDYGIGFRKGDQKLADAVWSQLLAM 248 >gi|188534296|ref|YP_001908093.1| Arginine-binding periplasmic protein 1 [Erwinia tasmaniensis Et1/99] gi|188029338|emb|CAO97215.1| Arginine-binding periplasmic protein 1 [Erwinia tasmaniensis Et1/99] Length = 243 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 83/247 (33%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L L + ++ F + A+ +GFD Sbjct: 1 MNKIVIAALLAGFSLSAGASQ-------------TIRFAAEASYPPFEFIDADNKIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I D + +L+ ++ D + D T RE + F Sbjct: 48 VDLANALCHEIDAD---CTFTNQAFDSLIPSLKFRRFDAVMSGMDITPEREK--QVLFTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K ++++ L G + VQ GTT + + + ++ + Sbjct: 103 PYYDNSALFIAQKG-KLANMDALKGKRVGVQNGTTHQKYI----GEKLPDVKVVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N P + + L A+ QG++E Sbjct: 158 NAVLDLKNGRIDAVFGDTAVVNEWLKNNQELAPLGEKVTDKTYFGNGLGIAVRQGNSELQ 217 Query: 239 NIVSWTH 245 + ++ Sbjct: 218 SKLNAAL 224 >gi|322516945|ref|ZP_08069838.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] gi|322124490|gb|EFX95981.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] Length = 283 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 84/256 (32%), Gaps = 18/256 (7%) Query: 1 MYKDFFVSIL-CLIILFFTSFSTNASI---------LGDIKKRGFLKCGINTGLVGFAEV 50 M K +L CL+I + S +S K +K G + V Sbjct: 1 MKKIVKTVLLSCLVIFPLFALSACSSRSHFATQKDQWQIYTKEKKIKIGFDATFVPMGYE 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + +G + GFD+D A+ + +++ ++ + L++ ID++ T R Sbjct: 61 EKDGSYVGFDIDLATAVFKLYGIN---VEWQAIDWDMKETELKNGTIDLIWNGYSVTDER 117 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAH 167 + F + Q + K GI SV+ +SG ++ QAG + + Sbjct: 118 K--QSADFTEPYMVNEQVLVTKKSSGIDSVAGMSGKTLGAQAGASGYDAFNASPKILRDI 175 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + + + R D D + ++ ++P A Sbjct: 176 VANQKAVQYSTFTQALIDLDSGRIDGLLIDRVYANYYLEKSGVLDQYNVMPAGYEGESFA 235 Query: 228 PAIIQGDTEWYNIVSW 243 + D ++ Sbjct: 236 VGARKADKTLIKKINQ 251 >gi|260655474|ref|ZP_05860962.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Jonquetella anthropi E3_33 E1] gi|260629922|gb|EEX48116.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Jonquetella anthropi E3_33 E1] Length = 250 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 88/246 (35%), Gaps = 16/246 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L S + AS++ G + G + F + +G +G+D Sbjct: 1 MKK-LGSALVLLAAAVLGSSAWGASVMDK----GEIVVGTESTFPPFEFLSPDGKLQGYD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + + + ++ +L + +ID+++ + R +G F Sbjct: 56 VDLAEAIGQKLGKK---VVWRDMSFDALIPSLLTGKIDLIAAGMSASPERAKRVG--FSD 110 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Y ++ I S++ L G ++ VQ GT E L +++ + Sbjct: 111 VYYRATSVVVIAAGSPIKSLADLQGKTMAVQLGTIQETFLR-----GQPGVSVRAYQKYD 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYN 239 + R D D + D + V + A A+ +GD + + Sbjct: 166 DCLREVVLGRADGAMMDETVAGEFLKQADFAGKIVSAFTQAAGESGQALAMPKGDETFIS 225 Query: 240 IVSWTH 245 V+ Sbjct: 226 AVNKAL 231 >gi|239983304|ref|ZP_04705828.1| glutamate binding periplasmic protein [Streptomyces albus J1074] gi|291455131|ref|ZP_06594521.1| glutamate binding periplasmic protein [Streptomyces albus J1074] gi|291358080|gb|EFE84982.1| glutamate binding periplasmic protein [Streptomyces albus J1074] Length = 312 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 86/243 (35%), Gaps = 13/243 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYL 81 + K RG L G E G + GFD++ + + + + +++++ Sbjct: 60 ESPTWRKAKARGALVVGAKEDQPYLGEKDPAGGGYTGFDIEIAKMVGAHLGFAENRVRFT 119 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 + + R ALQ+ QID R+ +G F Y GQG ++ + I Sbjct: 120 TIASANRETALQNGQIDYYVGTYTINDNRKRLVG--FAGPYYVAGQGLLVRSDEEDIKGP 177 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G +C AG+T + + + + ++ ++ DA T D + Sbjct: 178 EDLDGKRVCSAAGSTPYQRMQEEYPKA----VLVSYDTYSICVDNLLTYQVDAVTTDDAI 233 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 L P E ++ S+ P +++ D + A+ E G + Sbjct: 234 LLGYAAKV--PEELKVVGKPFSEEPYGIGVLRSDNALRLAIDD---ALEEGERKGYWKAA 288 Query: 261 INQ 263 + Sbjct: 289 YDA 291 >gi|307130768|ref|YP_003882784.1| arginine ABC transporter periplasmic-binding protein [Dickeya dadantii 3937] gi|306528297|gb|ADM98227.1| periplasmic-binding component of an ABC superfamily arginine transporter [Dickeya dadantii 3937] Length = 243 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 81/248 (32%), Gaps = 25/248 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++ L L ++ + ++ F V A+ GFD Sbjct: 1 MKKLFVAAL--LGGLSLSAGAAE-----------TIRFATEASYPPFESVDASNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL I + + L+ ++ D + D T R ++F Sbjct: 48 IDLANALCKQI---QATCTFSNQAFDSLIPGLKFRRFDAVIAGMDITPER--QQQVSFTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K ++ ++ L G + VQ GTT + L D K + ++ + Sbjct: 103 PYYENSALFIAQKG-KLADIAALKGKRVGVQNGTTHQKFLLDKHK----DITVVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N+ + L A+ Q + E Sbjct: 158 NAVLDLKNGRLDAVFGDTAVVNEWLKQNENLASVGDKVTDKDYFGIGLGIAVRQNNDELV 217 Query: 239 NIVSWTHY 246 + Sbjct: 218 KKFNDALN 225 >gi|28872469|ref|NP_795088.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28855724|gb|AAO58783.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 254 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 81/258 (31%), Gaps = 29/258 (11%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + + +F+ LK GI F A+G G Sbjct: 1 MKTYKKILLVAAATLAFSSGAFAE------------KLKMGIEGAYPPFNNKDASGQVVG 48 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD + +AL + + + + + + AL +++ D L + T R + F Sbjct: 49 FDYEIGQALCAKMKVE---CEVVTSDWDGIIPALNAQKFDFLISSLSITDER--KQVVDF 103 Query: 119 RPITYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 Y + F+ K I + L+G S+ Q T L D + Sbjct: 104 TDPYYSNKLQFLAPKTSSIDVSSIEKAKESLTGKSVGAQRSTLAATWLEDKLE----IMD 159 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +++ E + R DA D Y + + ++ + A+ + Sbjct: 160 AKLYDTQENAFLDLLSGRVDAMLADKYVSYEWLKSEAGQNFEFKGEPVVENDKIGIAVRK 219 Query: 233 GDTEWYNIVSWTHYAMVT 250 GD ++ ++ Sbjct: 220 GDDPLRERLNVALKEVIA 237 >gi|121609960|ref|YP_997767.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121554600|gb|ABM58749.1| extracellular solute-binding protein, family 3 [Verminephrobacter eiseniae EF01-2] Length = 246 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 42/244 (17%), Positives = 79/244 (32%), Gaps = 20/244 (8%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 +F+S+L +A + ++ + F NG GFD++ Sbjct: 3 RYFISLLAAFSFGLLPALASAQTVS------VIRVATDATFPPFEFF-KNGKRTGFDIEL 55 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 L+ + +++ ++ K L S++ D+ S T R + F Y Sbjct: 56 IELLAKNMGKK---VEWTDIDFKGLIPGLVSRRFDVASSAIYITEERRRV--VDFTDPYY 110 Query: 124 FDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G + I S L+G + VQ GT + L Y+ + I E+ +E+ Sbjct: 111 PGGLVVLTKASNTAIRQPSDLAGKKVSVQVGTKSANYLKAYYP----QTERIEVEKNQEM 166 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R DA A T +L +S A+ + + ++ Sbjct: 167 FNLVEIGRADAAVTGKPAAIEYAKTRPG---MKVLDKQVSVELYGYAVRKDLPQLTEEMN 223 Query: 243 WTHY 246 Sbjct: 224 AALK 227 >gi|295693349|ref|YP_003601959.1| amino acid ABC transporter, amino acid-binding protein [Lactobacillus crispatus ST1] gi|295031455|emb|CBL50934.1| Amino acid ABC transporter, amino acid-binding protein [Lactobacillus crispatus ST1] Length = 289 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 59/299 (19%), Positives = 107/299 (35%), Gaps = 42/299 (14%) Query: 1 MYKDFF----VSILCLIILFFT---------SFSTNASILGD------IKKRGFLKCGIN 41 M K F + ++++ + + + + IK+RG+L+ + Sbjct: 2 MAKKIFNWIMAVLFAVVVVIAGYFGITRPGINGTASGDRWNNENNVSSIKRRGYLRVAVF 61 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 L + V + G G+DV R ++ + P +++ +NA R L S + DI+ Sbjct: 62 GDLPPYGWVNSQGKRVGYDVRLARRVAKDLGVKP---KFIQVNANNRIDTLNSNKADIVL 118 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 N T R+ ++ G I K I+S QL G S+ V GTT E Sbjct: 119 ANFTLTPERKSV--ASWTKPYMKVSVGVISPKSAPITSPKQLKGKSVIVTKGTTAENYFT 176 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 + + F+ + A + R A D S LYA P V + I Sbjct: 177 -----KQKGVNLLKFDSKTQQFNAIKNGRGAALADDNSYLYAWVKR--NPKFTVGIKTIG 229 Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280 ++ A+ +G+ + IT+ N N +++ + G + Sbjct: 230 PNQYISGAVKKGNKSLQKWMDR-----------EITKLNSESFFTYDYNKELKPYFGKE 277 >gi|329295876|ref|ZP_08253212.1| glutamine ABC transporter periplasmic protein [Plautia stali symbiont] Length = 248 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 84/245 (34%), Gaps = 20/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + + L F+ ST A L +T V F + + + GFD+D Sbjct: 2 KSLIKVSVAALALAFSLSSTAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDID 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 53 LWDAIAKQLKLDY---TLKPMDFSGIIPALQTKNVDLALAGITITEERKK--AIEFSDGY 107 Query: 123 YFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ I + L+G + V++GT + DY KAH F ++ Sbjct: 108 YKSGLLVMVRNNENDIKGIDDLNGKVVAVKSGTGSV----DYAKAHIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + D I A +G + V Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIHTAGKGR-FKAIGDSIEAQQYGIAFPKGSDDLREKV 222 Query: 242 SWTHY 246 + Sbjct: 223 NGALK 227 >gi|300311590|ref|YP_003775682.1| amino acid ABC transporter/signal transduction system periplasmic protein/domain-containing protein [Herbaspirillum seropedicae SmR1] gi|300074375|gb|ADJ63774.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Herbaspirillum seropedicae SmR1] Length = 267 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 87/254 (34%), Gaps = 12/254 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K +L L + A L DI+K G ++ G+ F V + +G D+ Sbjct: 6 RKTMLAVVLGLAAM--QGGLARADALADIQKNGVVRIGVPQDFAPFGSVNTDLQLQGLDI 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D R ++ + +Q +P+ + R LQ+ + D++ RE + F Sbjct: 64 DVARLIAQKMGVK---LQLVPVASANRIAYLQTHKADLVISTLGRNAEREKV--IDFSQP 118 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 +S + L+ ++ V GT +L L D +E Sbjct: 119 YAPYNNSVFGVASVKVSGPADLADKTVGVARGTFQDLQLTDTAPK---SATIKRYEDNNA 175 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + +AY + + YAL +L II +S + +G+ V Sbjct: 176 MISAYVSGQVQLVGTGDFVAYALAEKAPN--NKPVLKYIIQESACNVGLNKGEPALLAKV 233 Query: 242 SWTHYAMVTAEELG 255 + A + EL Sbjct: 234 NEALTAAKKSGELN 247 >gi|51893761|ref|YP_076452.1| amino acid ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] gi|51857450|dbj|BAD41608.1| amino acid ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 291 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 76/229 (33%), Gaps = 19/229 (8%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S L IK+ G + + F + G++++ A+++ + + Sbjct: 49 APVSRLEQIKQAGKIVVATSADYPPFEYHAIIDGKDKIVGWEMELAEAIANELGVK---L 105 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKG 136 + L L + + D++ T R + F + Q ++ K + Sbjct: 106 EITEGIFDTLLLDLAAGKADMVISAMTITPER--LESVDFSEPYWMTAQSVLIPKAAEGT 163 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I S L G +I VQ GTT E+ + A +E E A R A G Sbjct: 164 IQSAEDLIGKTIGVQLGTTGEIAAKEVEGA-----EVRSYELFEAAVLDLVAGRVQAVVG 218 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D + + T + L +K A A Q D E V+ Sbjct: 219 DYAVVKNYAATRPELTVAFEL----TKEENAVAFRQDDDELREAVNAIL 263 >gi|323967295|gb|EGB62718.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli M863] gi|325496802|gb|EGC94661.1| arginine-binding periplasmic protein 2 precursor [Escherichia fergusonii ECD227] gi|327253647|gb|EGE65276.1| arginine-binding periplasmic protein 2 [Escherichia coli STEC_7v] Length = 243 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 82/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLSSCAFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S ++F Sbjct: 48 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + T P V + L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNNALAAI 227 >gi|170681491|ref|YP_001742968.1| arginine ABC transporter periplasmic arginine-binding protein ArtJ [Escherichia coli SMS-3-5] gi|170519209|gb|ACB17387.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli SMS-3-5] Length = 243 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 82/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLSSCAFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S ++F Sbjct: 48 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 103 PYYENSAVVIAKKNTY-KTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + T P V + L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNNALAAI 227 >gi|161521438|ref|YP_001584865.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia multivorans ATCC 17616] gi|189352394|ref|YP_001948021.1| polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|160345488|gb|ABX18573.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia multivorans ATCC 17616] gi|189336416|dbj|BAG45485.1| polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] Length = 260 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 92/255 (36%), Gaps = 21/255 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ + + +L ++ A K ++ G + F +G GFD Sbjct: 1 MKR--LIAAVSIALLAVSAGPAVA------KDWTTIRFGTDASYAPFESKAPDGKLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + +K +L + AL++K+ D + + T R +G F Sbjct: 53 IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITPQRAEQIG--FTT 107 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y ++ K + + L G SI V+ GTT E Y+ + + ++ Sbjct: 108 KIYNQPTRLVVKKGSPLLPTAESLKGKSIGVEQGTTQEAYAKAYWAKQG--ANVVSYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + A A R DA D L + R + + + + + + + D Sbjct: 166 DGVYADLTAGRLDAALQDEVQAAIGFLKSPRGAGYQFVGPELVDEKVLGIGAGIGLRKED 225 Query: 235 TEWYNIVSWTHYAMV 249 T+ + MV Sbjct: 226 TDLKAKIDRAILDMV 240 >gi|16330909|ref|NP_441637.1| glutamine-binding protein [Synechocystis sp. PCC 6803] gi|1653403|dbj|BAA18317.1| glutamine-binding protein [Synechocystis sp. PCC 6803] Length = 296 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 96/261 (36%), Gaps = 28/261 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNASI----------------LGDIKKRGFLKCGINTGLVG 46 + V+ L ++ + S A L I++RG L+ G+ L Sbjct: 26 RSLIVASCLLFLIPGLTVSATAQTMVLETNGIAMTSREVSLEAIRQRGKLRVGVKDNLRP 85 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 G+ G ++ R L+ A+ D + ++ +P+ ++R L + +D++ Sbjct: 86 LGFRDGQGELTGLEIALARRLALALLGDETAVELVPVQNQDRLPLLLNGDVDLIIAQMGQ 145 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F P Y DG G I K + ++ + +I V + T + F Sbjct: 146 NPARDRL--VDFSPPYYMDGVGLIS-KNSSLKNIDRNQAHTIAVLNNSGTIPVIKQAFPQ 202 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + ++ + A+ GD S L + ++ LP ++ +PL Sbjct: 203 A----TLVGVDSYDQAYQILEQGQAMAFAGDNSVLSGWAQSQS---DYYHLPLQLTVNPL 255 Query: 227 APAIIQ--GDTEWYNIVSWTH 245 A A+ + V+ T Sbjct: 256 AIAMAKGLQHQALQREVNQTL 276 >gi|312796580|ref|YP_004029502.1| cystine-binding protein [Burkholderia rhizoxinica HKI 454] gi|312168355|emb|CBW75358.1| Cystine-binding protein [Burkholderia rhizoxinica HKI 454] Length = 280 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 73/227 (32%), Gaps = 15/227 (6%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +K+ G L+ G+ F A+G+ G+DVD +A++ + P ++ Sbjct: 47 DQVKEHGTLRIGLEGTYPPFNFRDAHGELVGYDVDVAKAIALRLGVKPE---FITTEWSG 103 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSG 145 LQ+ + D++ T +R F + I K S+ L G Sbjct: 104 IIAGLQAGKFDVIVNQVGITPVR--QQTFDFSQPYTYSVAQLIQRKDDSRQFKSLDNLKG 161 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + V G+ + E A R DA D L L Sbjct: 162 KKLGVSLGSNYND-----MAKSVPGIEVKTYPGAPEYLRDLAAGRIDAALNDRLMLAYLI 216 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 TN P + + + +G+ ++ + A + A+ Sbjct: 217 KTNALP--LRPSSTLGQQEKVGIPFKKGNPKFAKAIDDAI-AQLKAD 260 >gi|146307938|ref|YP_001188403.1| cationic amino acid ABC transporter, periplasmic binding protein [Pseudomonas mendocina ymp] gi|145576139|gb|ABP85671.1| L-arginine-binding protein / L-ornithine-binding protein [Pseudomonas mendocina ymp] Length = 257 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 82/265 (30%), Gaps = 24/265 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L +L + + L+ GI FA +G GFD Sbjct: 1 MKKIALLGALALSMLSPLAMA-----------EKPLRIGIEAAYPPFAFKTPDGQISGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + + +++ AL+ ++ D + + T + + F Sbjct: 50 YDIGNALCEEMKVE---CKWIEQEFDGLIPALKVRKFDAVLSSMSITE--DRLKSVDFTG 104 Query: 121 ITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y M + L G + VQ + + D F + + + Sbjct: 105 KYYHTPAKLAMKAGTELKDPLVDLKGKKVGVQRASIYDRYATDVFAPAGI--EVVRYSSQ 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 EI ++ R DA D + L D +++ A+ +GD Sbjct: 163 NEIFLDLQSGRLDATLADSVNIDDGFLKTDAGKGFAFTGPDYTETKYFGEGAGIAVRKGD 222 Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259 E + +S A+ + Q Sbjct: 223 KELADKISAAILAIRANGKYKEVQD 247 >gi|152974180|ref|YP_001373697.1| extracellular solute-binding protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152022932|gb|ABS20702.1| extracellular solute-binding protein family 3 [Bacillus cytotoxicus NVH 391-98] Length = 264 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 86/253 (33%), Gaps = 18/253 (7%) Query: 1 MYKDFFVSILCLIILF---FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F + + + S +S + + ++ F + +G Sbjct: 1 MKKKLFTVAATITLSLSFILGACSKESSTTST-DGKKEFRYAMSGLYKPFNYKENDGKLM 59 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDV+ AL+ + P+ + + LQ+K+ D++ + T R ++ Sbjct: 60 GFDVEIGEALAKKMGMKPAPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVS 114 Query: 118 FR-PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F P Q F+ + ISSV L G + V +T + + + Sbjct: 115 FTKPYYRSGAQIFVSKQNDSISSVDDLKGKKVGVVKASTFKALVE------KQTDKITEY 168 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + R DA D + L++ + S ++ +A A+ + D + Sbjct: 169 DSDLTALMDLEPGRVDAVITD--QMVGLRMIKEGNSSIKEAGKPLNLDEMAIAVRKDDKK 226 Query: 237 WYNIVSWTHYAMV 249 V+ ++ Sbjct: 227 MVEKVNKALDEII 239 >gi|325576596|ref|ZP_08147314.1| L-cystine ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] gi|301155429|emb|CBW14895.1| cystine transporter subunit [Haemophilus parainfluenzae T3T1] gi|325161159|gb|EGC73274.1| L-cystine ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] Length = 257 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 79/260 (30%), Gaps = 19/260 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K FF + L L ++F+ I +++ L G F +G GFD Sbjct: 1 MKKSFFSTALLAAGLALSTFANAGEIADRVEQTKTLLVGTEGTYAPFTFHDKDGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ ++ + +++ + L +K+ D+++ T E + Sbjct: 61 VEIIEKVAQKLGWK---VEFKETAWDGMYAGLNAKRFDVIANQT--NPSPERLKKYDYSA 115 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + I S L G A + D + + + Sbjct: 116 PYNYSAGVIVTKADNDSIKSFPDLKGKKSAQSATSNWSKDARD------NGAIIVTVDSL 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A + R DA D A+ + + + K P A ++G+ Sbjct: 170 AQNLEAVKQGRVDATVNDKLAVLDYFKKQPNAGLKIAV-ESDKKIPTGFAFLKGEEPLIA 228 Query: 240 IVSWTHYAMVTAEELGITQK 259 V+ EEL Sbjct: 229 KVNQAL------EELRKDGT 242 >gi|295092613|emb|CBK78720.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Clostridium cf. saccharolyticum K10] Length = 302 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 83/287 (28%), Gaps = 47/287 (16%) Query: 1 MYKDFFVSILCLIILF-FTSFSTNASILG------------------------------- 28 M K F + ++F T+ STNA Sbjct: 1 MKKKVFSVMTAAALVFSLTACSTNAKTEEPETAAQSSASQTEAAGAETAESSGGASAEAG 60 Query: 29 ------DIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + K G G + V +G++ GFD++ ++ + Sbjct: 61 EKAASGETKAAGDTFTVGFDQDFPPMGFVGDDGEYTGFDLELAAEVADRLG---LTFVPQ 117 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ + + L+S ID + T + + + Q ++ + GI S + Sbjct: 118 PIAWDAKNMELESGNIDCIWNGFTMTGREDE---YTWSEPYMENSQVVVVLEDSGIESTA 174 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G + VQA ++ E L + + DA D + Sbjct: 175 DLAGKIVEVQADSSAEAALKEMPELTESFAALQTTPDYNTAFMDLEMGSVDAIAMD--VI 232 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 A IL D ++ A +G+ + V M Sbjct: 233 VAGYQLQQWDGGFKILDDTLASEEYAIGFKKGNEALRDQVQTVLDEM 279 >gi|166030981|ref|ZP_02233810.1| hypothetical protein DORFOR_00662 [Dorea formicigenerans ATCC 27755] gi|166029248|gb|EDR48005.1| hypothetical protein DORFOR_00662 [Dorea formicigenerans ATCC 27755] Length = 275 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 9/220 (4%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + K+ G + V +G++ GFD++ + + + + P+ Sbjct: 39 TFEEKKEGDTFTVGFDQDFPPMGFVGDDGEYTGFDLELAKEVCDRNGWEFNP---EPIAW 95 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + L+S +ID + + + + Q F++ GI+S L+G Sbjct: 96 DSKDALLKSGEIDCIWNGFTMNGREDE---YTWSEPYLDNQQVFVVRADSGINSEKDLAG 152 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ VQ ++ E L D + + + + DA D + A Sbjct: 153 KTVDVQTDSSAEAALKDN-TELSSTFSTEIIPDYNTGFMNLESGAVDAVAMD--IVVAKY 209 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R +E IL I+ +G+ + V T Sbjct: 210 QIESRSAEFKILDYEIASEQYGVGFAKGNDAVKDQVQKTL 249 >gi|29142427|ref|NP_805769.1| arginine-binding periplasmic protein 1 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|29138057|gb|AAO69618.1| arginine-binding periplasmic protein 1 precursor [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 243 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 83/247 (33%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANSKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + F Sbjct: 48 VDLANALCKEI---DASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217 Query: 239 NIVSWTH 245 + Sbjct: 218 QKFNTAL 224 >gi|261341396|ref|ZP_05969254.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Enterobacter cancerogenus ATCC 35316] gi|288316710|gb|EFC55648.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Enterobacter cancerogenus ATCC 35316] Length = 247 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 81/249 (32%), Gaps = 21/249 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSVLKVSLAALTLAFAVSSQAAD---------KLVVATDTAFVPFEFKQGD-KYVGFDVD 51 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 52 LWAAIAKELKLDY---TLKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 106 Query: 123 YFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ + SV L G + V+ GT + DY KA+ F ++ Sbjct: 107 YKSGLLVMVKADNNDVKSVKDLDGKVVAVKGGTGSV----DYAKANIKTKDLRQFPNIDN 162 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + D + A +G + V Sbjct: 163 AYMELGTNRADAVLHDTPNILYFIKTAGNGK-FKAVGDSLEAQQYGIAFPKGSDDLRTKV 221 Query: 242 SWTHYAMVT 250 + + Sbjct: 222 NGALKTLKE 230 >gi|317488404|ref|ZP_07946957.1| bacterial extracellular solute-binding protein, family 3 [Eggerthella sp. 1_3_56FAA] gi|316912448|gb|EFV34004.1| bacterial extracellular solute-binding protein, family 3 [Eggerthella sp. 1_3_56FAA] Length = 256 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 47/215 (21%), Positives = 74/215 (34%), Gaps = 8/215 (3%) Query: 35 FLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 L+ G + GF G+ +G +VD R L+ I P ++ +N R L Sbjct: 18 VLRVGTKIDVPGFGFQNPETGNIEGMEVDIARELAKRIKGSPDALRVTGVNVTTRGAMLD 77 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 + +D T R+ F Y D G ++ K GI + L G ++ V Sbjct: 78 NGTLDATLATFTITEARKK--SYNFSRPYYTDHIGVLVKKSSGIVDLKDLDGKTVGVALS 135 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT L + + EI A R DA++ D S L Sbjct: 136 ATTRDKLTAAGDEIGIHMSFAEYSTYPEIKIALVTGRVDAFSVDRSILNGYV-----DDS 190 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 ++L + A + +TE + V AM Sbjct: 191 TMLLDAQFAPQEYGVATKKSNTELADQVDAAIGAM 225 >gi|295677022|ref|YP_003605546.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295436865|gb|ADG16035.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 259 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 69/246 (28%), Gaps = 14/246 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + ++ + +A L IK G + G F G GFDV+ Sbjct: 2 KPIRSLAMAALLQAVLAHPASADDLAQIKASGVFRIGTEGTYAPFTYHDDAGKLTGFDVE 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + P Q++ L + D + T R+ L + Sbjct: 62 LASAIAQRLGVKP---QFIEGKWDGLIAGLDVNRYDAVINEVAVTDERK--LKYDYSDPY 116 Query: 123 YFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 I+ I S L G T + AH I + +E Sbjct: 117 ITSHAVLIVASDNTTIRSFDDLKGRKSA----NTLTSNVGRIAAAHG--AQVIPAQGFDE 170 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD--IISKSPLAPAIIQGDTEWYN 239 A R DA D + K V+ D S A I +G+ + Sbjct: 171 SIDLLVAGRVDATVNDSLSFLDYKKRVPDARIKVVAVDTSPDSSDKSAVLIRKGNPKLRL 230 Query: 240 IVSWTH 245 + Sbjct: 231 AIDDAL 236 >gi|310779668|ref|YP_003968001.1| amino acid ABC transporter substrate-binding protein, PAAT family [Ilyobacter polytropus DSM 2926] gi|309748991|gb|ADO83653.1| amino acid ABC transporter substrate-binding protein, PAAT family [Ilyobacter polytropus DSM 2926] Length = 260 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 83/256 (32%), Gaps = 26/256 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K I L ++ +SFS L G+ F A G+ G Sbjct: 1 MKK-IITIISMLFLISLSSFSQEKP----------LVVGMELAYPPFEMTDAKGNPTGIS 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL + D I + AL++K++DI+ + T R+ + F Sbjct: 50 VDMAKALGEYLGRD---IVIENMGYGGLIPALKTKKVDIILSSMTITDQRKK--SINFSD 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 ++ K+ + S L+ G +I V+ GTT + F N +VFE+ Sbjct: 105 PYAKSYLTLLVSKRSPVKRPSDLNTRGVNIAVKKGTTGHVVATKLFPKAN----IMVFEK 160 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK--SPLAPAIIQGDTE 236 + DA+ D K P+ + D K G+ Sbjct: 161 ESVCVLEVTQGKADAFIYDPLT--VFKNWKKNPNTTRPIFDQFQKDVEYWGVGYRHGEDA 218 Query: 237 WYNIVSWTHYAMVTAE 252 ++ + Sbjct: 219 LGREINGFIKEFKESG 234 >gi|307701104|ref|ZP_07638129.1| bacterial extracellular solute-binding protein, family 3 [Mobiluncus mulieris FB024-16] gi|307614099|gb|EFN93343.1| bacterial extracellular solute-binding protein, family 3 [Mobiluncus mulieris FB024-16] Length = 278 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 32/260 (12%), Positives = 71/260 (27%), Gaps = 20/260 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGD---------IKKRG-FLKCGINTGLVGFAEVK 51 K ++ L + ++ K G G + + Sbjct: 4 KKLSAAGCAAILALTLGACGNTSASNDKNHSTDHASAAKAAGEKFTIGFDPNFPPYGYKD 63 Query: 52 AN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G++ GFD+D + ++ + K P++ + + L S +D L Sbjct: 64 EKTGEYVGFDIDLAKEVAKR---NEWKFVPQPIDWDAKDMELNSGTVDCLWNGFTINGRE 120 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL--ADYFKAHN 168 + + + F+ I+ L+G + VQA ++ L D + Sbjct: 121 DK---YTWSKPYVDNSIVFVTKTADKITDTKGLAGKHVLVQADSSGLTALENKDNKDLKD 177 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + + DA D+ +++ I+ Sbjct: 178 SFASLDQVPDYNQAFMNMESGAADAVAVDVGVANFQVQAHEKGK-FTIMNPPFHTEQYGI 236 Query: 229 AIIQGDTEWYNIVSWTHYAM 248 +G+ + V M Sbjct: 237 GFKKGNESLRDQVQKALDEM 256 >gi|260770435|ref|ZP_05879368.1| ABC glutamine transporter extracellular solute-binding protein family 3 [Vibrio furnissii CIP 102972] gi|260615773|gb|EEX40959.1| ABC glutamine transporter extracellular solute-binding protein family 3 [Vibrio furnissii CIP 102972] Length = 263 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 90/241 (37%), Gaps = 10/241 (4%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 S+L L F + + A L ++++G LK + F V + G+D+D Sbjct: 7 MSSVLMSASLLFGATTAQADQLESVQQKGVLKVAVPQDFPPFGSVGTDLKPHGYDIDMAG 66 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 L+ + K++ +P+ + R LQ+ ++D++ + RE + F Sbjct: 67 YLAQKL---DVKLELVPVTSANRIPYLQTGKVDLVISSMGKNAEREKV--IDFSAAYAPF 121 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G + ++S LSG +I V G+ +L L+ + FE ++ Sbjct: 122 YLGVFGSSDEAVTSAQDLSGKTIGVTRGSVEDLELSKIAPS---DATIKRFEDNNATLSS 178 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + + + + P++ ++ SP +++G+ V+ Sbjct: 179 FLSGQVSLIATGNLVVTEIATRY--PAKAPQTKFLLKNSPCYVGVMKGEDALLKEVNRLI 236 Query: 246 Y 246 Sbjct: 237 T 237 >gi|160903094|ref|YP_001568675.1| extracellular solute-binding protein [Petrotoga mobilis SJ95] gi|160360738|gb|ABX32352.1| extracellular solute-binding protein family 3 [Petrotoga mobilis SJ95] Length = 243 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 86/257 (33%), Gaps = 24/257 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ LI F++FS G F V G++ GFD Sbjct: 1 MLKKAFLVSAILISFVFSAFSV------------TYVVGTEASFPPFEYV-EGGEFVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D R + D ++ ++ +L + IDI+ T RE + F Sbjct: 48 MDLIREIGKMYGFD---VEIRDISFDSLIPSLMTGNIDIIVAGMTITEEREKV--VDFTI 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVFER 178 Y Q ++ K + + L I VQ GTT +L + + K + I ++ Sbjct: 103 PYYSADQSIMVRKGEDTNLTILLRKPKIGVQTGTTGDLWVTENLIDAGFLPKTNLIRYDT 162 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 D D A + T P E V + A+ G+ + Sbjct: 163 FNFAVRDLVNKNIDVIVLDNP--VAERFTKTDPVEIVGIIKTN--ENYGMAVAPGNEDLL 218 Query: 239 NIVSWTHYAMVTAEELG 255 N+++ + + ++ Sbjct: 219 NMLNEGITKLQESGKMD 235 >gi|254253567|ref|ZP_04946884.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] gi|124898212|gb|EAY70055.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] Length = 290 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 92/255 (36%), Gaps = 21/255 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++++ + +L ++ A K ++ G + F +G GFD Sbjct: 31 MKR--LIAVVSIALLAVSAGPAIA------KDWTTIRFGTDASYAPFESKAPDGKLVGFD 82 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + +K +L + AL++K+ D + + T R +G F Sbjct: 83 IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITPQRAEQIG--FTT 137 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y ++ K + + L G SI V+ GTT E Y+ + + ++ Sbjct: 138 KIYNQPTRLVVKKGSPLLPTAESLKGKSIGVEQGTTQEAYAKAYWAKQG--ANVVAYQNQ 195 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + A A R DA D L + R + + + + + + D Sbjct: 196 DGVYADLIAGRLDAALQDEVQAAIGFLKSPRGAGFQFVGPELVDEKVLGVGAGIGLRKED 255 Query: 235 TEWYNIVSWTHYAMV 249 T+ + MV Sbjct: 256 TDLKAKIDRAILDMV 270 >gi|228477470|ref|ZP_04062106.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] gi|228250905|gb|EEK10093.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus salivarius SK126] Length = 224 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 46/213 (21%), Positives = 95/213 (44%), Gaps = 16/213 (7%) Query: 3 KDFFVSILCLIILFF----TSFSTNASIL------GDIKKRGFLKCGINTGLVGFAEVKA 52 + +S++ + + +S + +S L I K+G L G+ + F A Sbjct: 8 RILAISVIAFLAVLLWNTKSSQADESSKLLNSAAIQKIVKKGTLNVGVKQDVPNFGYYSA 67 Query: 53 N-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++G ++D + ++ + K+ + + + R + + ID+L T R+ Sbjct: 68 KTNTYQGMEIDLAKKIAKEL---KVKVNFTAVTPQTREALMDNGTIDMLIATYTITDERK 124 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 S + Y+D GF++ K G +S L+G +I V G++ + + +Y A+N+K+ Sbjct: 125 ASYAM--STPYYYDQIGFLVQTKSGYKKLSDLNGKTIGVSQGSSAKAAVEEYASANNLKF 182 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 + + E+ + A+R DA+ GD S L Sbjct: 183 NYVQLGSYPELAVSLYAYRIDAFAGDKSILSGY 215 >gi|206975631|ref|ZP_03236543.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus H3081.97] gi|217958458|ref|YP_002337006.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH187] gi|222094599|ref|YP_002528659.1| amino acid ABC transporter , amino acid-binding protein [Bacillus cereus Q1] gi|229137672|ref|ZP_04266277.1| Extracellular solute-binding protein family 3 [Bacillus cereus BDRD-ST26] gi|229195189|ref|ZP_04321964.1| Extracellular solute-binding protein family 3 [Bacillus cereus m1293] gi|206746093|gb|EDZ57488.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus H3081.97] gi|217068071|gb|ACJ82321.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus AH187] gi|221238657|gb|ACM11367.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus Q1] gi|228588418|gb|EEK46461.1| Extracellular solute-binding protein family 3 [Bacillus cereus m1293] gi|228645787|gb|EEL02016.1| Extracellular solute-binding protein family 3 [Bacillus cereus BDRD-ST26] Length = 265 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 35/254 (13%), Positives = 75/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELSEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSKPYISSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + E + + R D D ++ T ++ + + Sbjct: 170 EIVGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G T+ V Sbjct: 229 KGSTKLVQEVDKAL 242 >gi|311280246|ref|YP_003942477.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter cloacae SCF1] gi|308749441|gb|ADO49193.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter cloacae SCF1] Length = 243 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 86/247 (34%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + L T+ ++ F + A+ GFD Sbjct: 1 MKKVLIAALLASVSLSATAAE-------------TIRFATEASYPPFESMDASNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ID + D T RE + F Sbjct: 48 VDLANALCKEI---DATCTFTNQAFDSLIPSLKFRRIDAVMAGMDITPEREK--QVLFSK 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K +++ QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFIGQKG-KYATIDQLKGKKVGVQNGTTHQKFITDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + +ND+ + + L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKSNDKLASVGDKVTDKDYFGTGLGIAVRQGNTELQ 217 Query: 239 NIVSWTH 245 + Sbjct: 218 QKFNAAL 224 >gi|222086233|ref|YP_002544765.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221723681|gb|ACM26837.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 260 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 78/238 (32%), Gaps = 20/238 (8%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 F + + + G + + + A+G GFD+D AL + Sbjct: 19 FAGAALADGDS---------IVIGTDATYPPYESLDASGKIVGFDIDIANALCDQM---K 66 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K ++ + ALQ+K+ D + + T RE + F Y + K Sbjct: 67 IKCTFVNQDFDGIIPALQAKKFDAIVSSMSITPEREK--AIDFTNKYYNTPPAIAVPKDS 124 Query: 136 GISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I+ + L G SI Q+ TT A+Y AH ++ +E R DA Sbjct: 125 TIADTTDEALKGKSIGAQSSTTH----ANYATAHLKDAELKLYPSPDEYKLDLSNGRIDA 180 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 D+ L ++ ++ I G + + A +TA Sbjct: 181 VIDDVVVLSEWVKSDAGSCCKLLGTLKIDPEINGIGAGIGLRKGDTALKDKFNAAITA 238 >gi|116695743|ref|YP_841319.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113530242|emb|CAJ96589.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia eutropha H16] Length = 267 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 93/258 (36%), Gaps = 11/258 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + +L L++L +F+ A + +I K+G + G+ TG F A G G+DVD Sbjct: 8 RRAAAPVLTLLVLTSAAFTAQAQTVAEIVKKGRVTIGVVTGAPPFGTTDATGKPAGYDVD 67 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 L + + +PL + R AL++ ++D L T R + F Sbjct: 68 VANLLGKYLG---VPVDIVPLTSPSRIPALEAGKVDFLVATLAPTPERAR--AIMFSAPY 122 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + +++L + V GTT + L + + FE Sbjct: 123 SAFELTIFAPVAAKYARLTELGKKKVGVTRGTTQDTALTRLAV---PGMNIVRFEDDATC 179 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A +++ +A + ++ R + S P + A+ + E ++ Sbjct: 180 AQALISNQVEAIALPNTT--GNEIMKARGAGKFDAKFAFSVQPNSMAVRRDAFELRQWLN 237 Query: 243 WTH-YAMVTAEELGITQK 259 T Y + E I QK Sbjct: 238 TTISYVKLNGELDAIAQK 255 >gi|292900018|ref|YP_003539387.1| histidine ABC transporter substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291199866|emb|CBJ46990.1| histidine ABC transporter, substrate-binding protein [Erwinia amylovora ATCC 49946] gi|312173032|emb|CBX81287.1| Histidine-binding periplasmic protein HBP; Flags: Precursor [Erwinia amylovora ATCC BAA-2158] Length = 260 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 79/254 (31%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + I + L+ G + F A G GFD Sbjct: 1 MKKQVLALSLLMAITAAGNAFAAGP--------KTLRIGTDPTYAPFEMKNAEGQLTGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + +K ++ + +L++K++D + + T R +AF Sbjct: 53 IDLANEICQRM---ETKCTFVESDFDALIPSLKAKKVDAIISSLSITAKR--QQEIAFSA 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I +++ L G +I + GTT E ++ + P + Sbjct: 108 KLYAANSRLIAPKGSKIQPTLASLKGKTIGLLQGTTQETYANQNWRPQGVTVTP--YANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + A R DA D A L ++ I + + + + Sbjct: 166 DLVYQDLTAGRIDAAFQDEVAASEGFLKQPVGKDYAFAGPAIKDEKIFGVGTGIGLSKDN 225 Query: 235 TEWYNIVSWTHYAM 248 + M Sbjct: 226 PALKAAIDKAFDDM 239 >gi|260424786|ref|ZP_05733292.2| amino acid ABC transporter, permease/substrate-binding protein [Dialister invisus DSM 15470] gi|260403193|gb|EEW96740.1| amino acid ABC transporter, permease/substrate-binding protein [Dialister invisus DSM 15470] Length = 305 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 91/289 (31%), Gaps = 27/289 (9%) Query: 1 MYKDFFVSILCLIILFFTSFS------------TNASILGDIKKRGFLKCGINTGLVGFA 48 M + + I LF + S + ++ IKK+G L G +G + Sbjct: 27 MIRAVILGIAASAALFVSGCSDGNKAPDQGAVQKESPLMQKIKKQGKLVVGTASGYPPYE 86 Query: 49 EVKAN---GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 + + G D+ + ++ + ++ +N + +L ++DI + Sbjct: 87 FIDTSVGEKKVIGIDMALAQKIADELGVK---LEVQDMNFQALLTSLTGGKVDIAIAGIN 143 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + F Q I+ K+ + L G ++ VQ TT E + Sbjct: 144 PTEERKK--SMDFSADYLPTEQKVIIRKEDGSRYKKLEDLFGKTVGVQKSTTQEALAKEK 201 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 K + V E+ + + D + L + + + Sbjct: 202 IK----DTKIVSLAHVPEVVLELKQGKVDGLVVEGIVG-GQYLVFNDDLMFSEVEFPNAV 256 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 A A+ +G+ + +V+ ++ + + + Sbjct: 257 KSSAAAVQKGNEDVVAVVNKVIKENTDNGNFKKWTDEYSRKAVENADKQ 305 >gi|221212306|ref|ZP_03585283.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia multivorans CGD1] gi|221167405|gb|EED99874.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia multivorans CGD1] Length = 260 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 92/255 (36%), Gaps = 21/255 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ + + +L ++ A K ++ G + F +G GFD Sbjct: 1 MKR--LIAAVSIALLAVSAGPAVA------KDWTTIRFGTDASYAPFESKAPDGKLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + +K +L + AL++K+ D + + T R +G F Sbjct: 53 IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITPQRAQQIG--FTT 107 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y ++ K + + L G SI V+ GTT E Y+ + + ++ Sbjct: 108 KIYNQPTRLVVKKGSPLLPTAESLKGKSIGVEQGTTQEAYAKAYWAKQG--ANVVSYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + A A R DA D L + R + + + + + + + D Sbjct: 166 DGVYADLTAGRLDAALQDEVQAAIGFLKSPRGAGYQFVGPELVDEKVLGIGAGIGLRKED 225 Query: 235 TEWYNIVSWTHYAMV 249 T+ + MV Sbjct: 226 TDLKAKIDRAILDMV 240 >gi|323942777|gb|EGB38942.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E482] Length = 243 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 82/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + GI+ F + AN + GFD Sbjct: 1 MKKLVLAALLASFTFGASAAE-------------KINFGISATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S ++F Sbjct: 48 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 103 PYYENSAVVIAKK-DTYKTFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + T P V + L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWLKT--NPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNNALAAI 227 >gi|254720343|ref|ZP_05182154.1| hypothetical protein Bru83_12605 [Brucella sp. 83/13] gi|265985360|ref|ZP_06098095.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13] gi|306837437|ref|ZP_07470313.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. NF 2653] gi|306840652|ref|ZP_07473404.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. BO2] gi|306845794|ref|ZP_07478362.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. BO1] gi|264663952|gb|EEZ34213.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13] gi|306273686|gb|EFM55524.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. BO1] gi|306289390|gb|EFM60626.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. BO2] gi|306407480|gb|EFM63683.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. NF 2653] Length = 257 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 71/246 (28%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ +I + + L IK G LK G F + GFD Sbjct: 1 MKFAQILATAGIIQAVLFTGAMAGENLDAIKSAGVLKIGTEGTYAPFTYHDKDNKLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A++ + P ++ L + + D + T R+ F Sbjct: 61 VEIGEAVAEKLGVKPE---FVEGKWDGLIAGLDANRYDAVINQVGITEERKK--KFNFSN 115 Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + K I + L G Q+ T+ LA A + + Sbjct: 116 PYIVSKVVLIVNDKNDTIKDFADLKGKK-AAQSLTSNYGRLAKEAGAK-----LVATDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ R DA D + + + ++ + + +GD E Sbjct: 170 DQSIQLVLTGRADATLNDSLSYLDFRKHQPKAPV-KVVAEKDEADASGIIVRKGDDELVA 228 Query: 240 IVSWTH 245 ++ Sbjct: 229 AINKAL 234 >gi|220903864|ref|YP_002479176.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868163|gb|ACL48498.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 247 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 78/260 (30%), Gaps = 25/260 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F ++L L + + + + + N GFD Sbjct: 1 MIRRFAFALLVLTLFCGQALAAE-----------KYVVATDCTWPPMELLDENKQPVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF + A + + + F + + Q DI++ T T R+ F Sbjct: 50 VDFITEVGKAAGFE---VDVRNIAWDGIFGGVATGQYDIVAAATTITPERQK--QFDFSD 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y Q ++ + I S+ L G + Q GTT + + + ++ V Sbjct: 105 PYYEVAQAVVLPAGQNIKSLDDLKGKKVGGQIGTTGVFVI----RKSGVPVDLKEYDDVG 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA D + + K + +G T+ Sbjct: 161 LAIQDMLGGRIDAVICDEPVAMYYANKKADTAGKLNLSFKTAEKEYYGFTVRKGRTDLVE 220 Query: 240 IVSWTHYAM----VTAEELG 255 ++ A+ V AE L Sbjct: 221 KLNKGIKAVKASGVEAELLE 240 >gi|121610413|ref|YP_998220.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121555053|gb|ABM59202.1| extracellular solute-binding protein, family 3 [Verminephrobacter eiseniae EF01-2] Length = 274 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 50/307 (16%), Positives = 95/307 (30%), Gaps = 65/307 (21%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG--DWKGFDVDFCRALSSAIFDDPSK 77 + +A + IK RG L CG+ + V F+ ++ G+D+D C A++ + P Sbjct: 22 GTASADEIDTIKARGTLICGVGSNTVPFSYIEDPQTRKNVGYDIDLCEAVAKTLGVKPE- 80 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + R +Q ++D+ + T R+ ++F G I + + Sbjct: 81 --LKFVTTATRIPEVQQGRVDLALASVTITPERQEL--ISFSHPHLVTGTAIITPASRPM 136 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 ++S + + V G T ++ PI F A + A D Sbjct: 137 KALSDMENKRVSVIEGGLTGPAVSQKIP----GAKPIGFVTPATAFLALEQGKVQAMAAD 192 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + L L P ++ + + + L + + + V+ T Sbjct: 193 ETTLLGL--MRSTPGKYAMFNEYLVLEKLGIGVHKERPKLLAAVNQT------------- 237 Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317 L ++KS + +DR G Sbjct: 238 ------------------MLDMEKSGQ----------------AQV-----SYDRWFGAN 258 Query: 318 SELKIPR 324 S LK R Sbjct: 259 SPLKRKR 265 >gi|154246379|ref|YP_001417337.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154160464|gb|ABS67680.1| extracellular solute-binding protein family 3 [Xanthobacter autotrophicus Py2] Length = 271 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 10/238 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + S +A+ L DI+KRG ++ G+ TG V +G G+DVD + + +F+ Sbjct: 26 VAGSADATSLSDIQKRGKVRIGVLTGAPPMGMVDEHGKPAGYDVDVANLVGT-MFN--LP 82 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ +P+ R ALQ+ Q+D L T R + + F + K Sbjct: 83 VELVPVTPPARIPALQTGQVDFLVATLAPTGERAKT--VMFTTPYSAFNMVVVSGPGKVY 140 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + V L G I V G++ E L +A+ +V+E A + + D Sbjct: 141 NVVGDLKGKRIAVNRGSSQETALR---RANVPGLELVVYEDDATTAQALLSGQVDGTALP 197 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + AL PS + + + + A + GD E + + Y M + +L Sbjct: 198 STVAAALLKQM--PSAGLQVGQPFFRQGNSMATLPGDFELLHYLDTLIYLMKVSGQLD 253 >gi|228984045|ref|ZP_04144234.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775725|gb|EEM24102.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 265 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 35/254 (13%), Positives = 75/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELSEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + E + + R D D ++ T ++ + + Sbjct: 170 EIVGVEGFSQAAELLSSGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G T+ V Sbjct: 229 KGSTKLVQEVDKAL 242 >gi|323969573|gb|EGB64861.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TA007] Length = 243 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 85/249 (34%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + F Sbjct: 48 VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTH 245 ++ Sbjct: 216 LQQKLNTAL 224 >gi|213971201|ref|ZP_03399319.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|301382330|ref|ZP_07230748.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302060015|ref|ZP_07251556.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato K40] gi|302132166|ref|ZP_07258156.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924070|gb|EEB57647.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|331017118|gb|EGH97174.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 254 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 81/258 (31%), Gaps = 29/258 (11%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + + +F+ LK GI F A+G G Sbjct: 1 MKTYKKILLVAAATLAFSSGAFAE------------KLKMGIEGAYPPFNNKDASGQVVG 48 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD + +AL + + + + + + AL +++ D L + T R + F Sbjct: 49 FDYEIGQALCAKMKVE---CEVVTSDWDGIIPALNAQKFDFLISSLSITDER--KQVVDF 103 Query: 119 RPITYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 Y + F+ K I + L+G S+ Q T L D + Sbjct: 104 TDPYYSNKLQFLAPKTSSIDVSSIEKAKESLTGKSVGAQRSTLAATWLEDKLE----IMD 159 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +++ E + R DA D Y + + ++ + A+ + Sbjct: 160 AKLYDTQENAFLDLLSGRVDAMLADKYVSYEWLKSEAGQNFEFKGEPVVENDRIGIAVRK 219 Query: 233 GDTEWYNIVSWTHYAMVT 250 GD ++ ++ Sbjct: 220 GDDPLRERLNVALKEVIA 237 >gi|218247435|ref|YP_002372806.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC 8801] gi|257061227|ref|YP_003139115.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] gi|218167913|gb|ACK66650.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8801] gi|256591393|gb|ACV02280.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 8802] Length = 272 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 81/250 (32%), Gaps = 9/250 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + F+ +IL I++ G + G + F G+W G+ Sbjct: 1 MKKTVIALLSLIFLASFSLKVVAETILDKIERTGEMTAGARKDAIPFGYEDEGGNWTGYS 60 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 V+ + + P K+ + RF +Q++ +D++ T T R + + Sbjct: 61 VELIHLIHQELEKSLKKPIKLTFKEATLDNRFEIVQTETVDLVCEATTITQERLKKVDFS 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + LS I GTTT+ + + + K V + Sbjct: 121 LPFFMTGAQFLVKLKDASTFDINGTLSKIPIAFIPGTTTQEIIPQIYPFADWK----VVK 176 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYA-LKLTNDRPSEHVILP-DIISKSPLAPAIIQGDT 235 E + A D L L + P + ++P I+ + + + Sbjct: 177 SRREGLLKLKKGEVQAVVSDGVLLVGELVQVGNNPRDFTLIPRQPITTELYGCMLPKNNP 236 Query: 236 EWYNIVSWTH 245 +W + Sbjct: 237 DWKEFIDNVI 246 >gi|313904156|ref|ZP_07837535.1| extracellular solute-binding protein family 3 [Eubacterium cellulosolvens 6] gi|313470958|gb|EFR66281.1| extracellular solute-binding protein family 3 [Eubacterium cellulosolvens 6] Length = 271 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 82/265 (30%), Gaps = 23/265 (8%) Query: 1 MYKDFFVSILCLIILFFTSF---------STNASILGDIKK-----RGFLKCGINTGLVG 46 M K + ++L + + + + + ++ + G L N Sbjct: 1 MKKILVAVLSLGMMLSLAACGSTENKESNAVSGTSVSNVAELNLVEDGKLHMATNASFPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + +G ++G DV+ ++ + ++ + ++Q+ + DI Sbjct: 61 YEMTTDDGGYEGIDVEIATEIAKKLG---LELVVDDMEFSSVITSVQNGKSDIAMAGLTV 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS-ICVQAGTTTELTLADYFK 165 R+ + F Q I+ + I+SV L A I Q GTT + +D + Sbjct: 118 NEERKK--NINFTDTYTKGVQSIIVPEDSEIASVDDLGKAKAIGCQEGTTGYIYCSDTEE 175 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 I + A + DA D + IL ++ Sbjct: 176 NGGYGDKAIAYPDGATAVQALTTGKVDAVVIDN---APAQEFVKANKGLKILDTAYAEEE 232 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVT 250 A + + + V+ ++ Sbjct: 233 YAIGVSKKNDLLLEAVNKALNELIE 257 >gi|157144750|ref|YP_001452069.1| hypothetical protein CKO_00477 [Citrobacter koseri ATCC BAA-895] gi|157081955|gb|ABV11633.1| hypothetical protein CKO_00477 [Citrobacter koseri ATCC BAA-895] Length = 260 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 94/279 (33%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ ++ + + + L ++ G + F+ A GD+ GFD Sbjct: 1 MKKTVLALSL---LVGLSATAASYAALPQ-----TVRIGTDATYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QIKCTWVGSDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K + L G + V G+T E D +++ + + + Sbjct: 108 KLYAADSRLIAAKGSSVQPTIDSLKGKHVGVLQGSTQEAYANDNWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + A R DA D A L ++ + + + D Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKDYAFAGPSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE A A ++++K + +V Sbjct: 226 TELKA-------AFDKALSDLRADGTYDKMAKKYFDFNV 257 >gi|116252499|ref|YP_768337.1| solute-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115257147|emb|CAK08242.1| putative solute-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 257 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 89/261 (34%), Gaps = 23/261 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + F + + + LF S + G ++ F V A+G +GFD+D Sbjct: 6 RIFAAASIAAMSLFAGSAMADGE---------KYVIGTDSTYPPFEFVDASGTIQGFDID 56 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +AL + + ++ ++ + AL +K+ D++ + T R + F Sbjct: 57 ITKALCAEM---KAECSFVSTDWDGIIPALNAKKFDMIVSSMSITPERLKL--VDFSNKY 111 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y + K IS V+ L G I Q TT + ++ +E Sbjct: 112 YNTPPAIAVPKDSTISDVAGLKGKVIGAQTSTTHANYAEKHLA----DTELKLYPTADEY 167 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWY 238 + R DA D+ L ++ ++ + K AI +GD Sbjct: 168 KLDVASGRVDAVIDDVVVLSEWVKSDAGACCKILTTLPVDKEINGNGAGIAIRKGDP-LK 226 Query: 239 NIVSWTHYAMVTAEELGITQK 259 ++ A+ + E Q Sbjct: 227 EKLNTAIAAIRASGEYKKIQD 247 >gi|329770547|ref|ZP_08261925.1| hypothetical protein HMPREF0433_01689 [Gemella sanguinis M325] gi|328836296|gb|EGF85965.1| hypothetical protein HMPREF0433_01689 [Gemella sanguinis M325] Length = 276 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 79/255 (30%), Gaps = 14/255 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + L +L T ++ D + + + G + V +G Sbjct: 1 MKISKLIITLLSFLLILTGCASGGKDKPQKDNWNDFENQKTIVIGFDNTFVPMGFQDKSG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+D + K+Q+ +N + L++ ID++ T RE + Sbjct: 61 KNIGFDIDLANEVFKKY---NIKVQWQAINWDLKETELKNGNIDLIWNGYSKTSEREKT- 116 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKY 171 + F + Q + K K I + QL + Q G++ + + K+ Sbjct: 117 -VLFSDEYMINEQVIVTKKSKNIVNKDQLKDKVLGAQNGSSGYDSFNSNPEILKSIVKNN 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 +E E R DA D ++ ++ I A Sbjct: 176 DATQYESFNEALIDLENDRIDALLIDRVYANYYLKQQNKLQDYNIFNAGFEGDSFAVGAR 235 Query: 232 QGDTEWYNIVSWTHY 246 + DT V+ Sbjct: 236 KADTTLVKKVNEAFK 250 >gi|49480141|ref|YP_035104.1| amino acid ABC transporter amino acid-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52144471|ref|YP_082357.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus E33L] gi|228944594|ref|ZP_04106964.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229089914|ref|ZP_04221169.1| Extracellular solute-binding protein family 3 [Bacillus cereus Rock3-42] gi|49331697|gb|AAT62343.1| amino acid ABC transporter, amino acid-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51977940|gb|AAU19490.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus E33L] gi|228693539|gb|EEL47245.1| Extracellular solute-binding protein family 3 [Bacillus cereus Rock3-42] gi|228815054|gb|EEM61305.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 265 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 35/254 (13%), Positives = 75/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELSEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + E + + R D D ++ T ++ + + Sbjct: 170 EIVGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G T+ V Sbjct: 229 KGSTKLVQEVDKAL 242 >gi|34556715|ref|NP_906530.1| binding protein component ABC transporter [Wolinella succinogenes DSM 1740] gi|34482429|emb|CAE09430.1| BINDING PROTEIN COMPONENT ABC TRANSPORTER [Wolinella succinogenes] Length = 267 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 87/247 (35%), Gaps = 15/247 (6%) Query: 1 MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +L L + + + S L I KRG L+ + G F G+ GF Sbjct: 1 MKKILLGILLALGVAWAADMALWEKSTLNAIIKRGELRVSTDPGYYPFEMKDKKGNVIGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D R ++ A+ + + + L + + D++ T R +L +AF Sbjct: 61 DIDIAREMAKAMGVK---LVIVQGSFDSLISGLLTDKADLILAGMTITPER--NLKVAFS 115 Query: 120 PITYFDGQGFIMHKK--KGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIV 175 + GQ ++ + + + L V T E+ K Sbjct: 116 NPYFTIGQTLLVRPDLKEKVKNYKDLDKPEYTVVTKLGVTGEIVARRMMK----NAKIKT 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ E + DA+ D + + V L I+ PL A+ +GD Sbjct: 172 YDTEAEAVQEVLNGKADAFIYDFPFNSTFMMQKGKGL-LVHLDQSITYEPLGIALKKGDP 230 Query: 236 EWYNIVS 242 ++ N ++ Sbjct: 231 DFLNWLN 237 >gi|190895059|ref|YP_001985352.1| putative amino acid ABC transporter substrate-binding protein [Rhizobium etli CIAT 652] gi|190700720|gb|ACE94802.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] gi|327194401|gb|EGE61261.1| putative amino acid ABC transporter substrate-binding protein [Rhizobium etli CNPAF512] Length = 275 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 79/239 (33%), Gaps = 10/239 (4%) Query: 1 MYK-DFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K F ++ + LF + S A L +K G LK G T F + A G+ G Sbjct: 1 MRKNSFLKGLVGVAFLFGATISAHAADTLAAVKAAGTLKVGTETAFAPFDFIDA-GEHVG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +VD + + I+++ L F AL++ + D+++ T R F Sbjct: 60 LNVDLFNEIGKELGVK---IEWVTLPWDGVFPALEAGKFDVVAGPATITKKR--MERYRF 114 Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 P + I+ ++G I V T L ++ + K + Sbjct: 115 TPPLAEATIAILKKAGDKTINKPEDIAGKKIGVGKATAQLDQLKEFSETLPTKVDVREYP 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E A A R + + + V+LP KS ++ Sbjct: 175 AFTESYADLAAGRIAGVANSLPNIA-FVAKQREGTFEVVLPPFGKKSYFGFIGLKDADH 232 >gi|110801621|ref|YP_699371.1| glutamine-binding periplasmic protein of glutamine ABC transporter [Clostridium perfringens SM101] gi|110682122|gb|ABG85492.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens SM101] Length = 502 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 89/254 (35%), Gaps = 16/254 (6%) Query: 1 MYKDFFVSILCL--IILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWK 57 M K + L + +++ S N++ + + + F + G+ K Sbjct: 1 MKKKLMLLFLTISILMMVLVGCSNNSNNIQKNSTNKEKITVATSGTYYPFTFL-EGGELK 59 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GF+VD + + D +++ + F L+S +++ ++ T RE Sbjct: 60 GFEVDVWNEIGKRLGYD---VEFKTASFSGLFGMLESGKVNTIANQITVTPEREE--KYY 114 Query: 118 FRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G I+ K I S L G + V G+ E + D K N + + + Sbjct: 115 FSEPYVYSGAQIIVKKGNDSIKSFDDLKGKKVGVDLGSNYEKIVKD--KDENNEIKILTY 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD-- 234 + + R DA D + A+ ++ + + I K A ++ + Sbjct: 173 QNTDAAFNELLLGRIDAVVIDRVS--AIAAIKEKDLNLQLAGEPIDKIENAYPFVKDEKG 230 Query: 235 TEWYNIVSWTHYAM 248 + V+ M Sbjct: 231 KDLSENVNKALDEM 244 >gi|187730469|ref|YP_001880943.1| arginine ABC transporter periplasmic arginine-binding protein ArtJ [Shigella boydii CDC 3083-94] gi|187427461|gb|ACD06735.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Shigella boydii CDC 3083-94] Length = 243 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S ++F Sbjct: 48 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 103 PYYENSAVVIAKK-DTYKAFADLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P V + L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNNALAAI 227 >gi|256851586|ref|ZP_05556975.1| amino acid ABC transporter substrate-binding component [Lactobacillus jensenii 27-2-CHN] gi|260661010|ref|ZP_05861925.1| amino acid ABC transporter substrate-binding component [Lactobacillus jensenii 115-3-CHN] gi|282932374|ref|ZP_06337805.1| cystine-binding periplasmic protein [Lactobacillus jensenii 208-1] gi|297206404|ref|ZP_06923799.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus jensenii JV-V16] gi|256616648|gb|EEU21836.1| amino acid ABC transporter substrate-binding component [Lactobacillus jensenii 27-2-CHN] gi|260548732|gb|EEX24707.1| amino acid ABC transporter substrate-binding component [Lactobacillus jensenii 115-3-CHN] gi|281303488|gb|EFA95659.1| cystine-binding periplasmic protein [Lactobacillus jensenii 208-1] gi|297149530|gb|EFH29828.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus jensenii JV-V16] Length = 263 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 81/249 (32%), Gaps = 17/249 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + L I L + S S ++ +G L G+ ++ NG KGF+V Sbjct: 5 KKISLFAGLIAISLGLVACSNQKSTNSEVLNKGTLTVGLEGTYAPYSYR-ENGKLKGFEV 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +A++ I+++P L +K+ DI+ + T R+ F Sbjct: 64 DLAKAVAKKAGYK---IKFVPTKWDSLIAGLGAKKFDIVINDIAMTPERKK--AYTFSTP 118 Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + IM K I S + G I GT + + + + Sbjct: 119 YIYSKSALIMKKTNNTIKSAKDIKGLKIAAATGTANADNVKKFGGQN------VSSTDFS 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP---LAPAIIQGDTEW 237 R +R A A + ++ + ++ P + + +G++ Sbjct: 173 TAMELIRQNRVVAAMNSKEAFL-YYQKSQHVTDLKYVEIPTNQIPAQEIGIMMSKGNSSL 231 Query: 238 YNIVSWTHY 246 ++ Sbjct: 232 QKKINKALN 240 >gi|307945340|ref|ZP_07660676.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Roseibium sp. TrichSKD4] gi|307771213|gb|EFO30438.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Roseibium sp. TrichSKD4] Length = 258 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 74/220 (33%), Gaps = 15/220 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ G F + ++G GFD+D AL + + +++ + ALQ+ Sbjct: 27 KVRIGTEGAYPPFNSLTSDGQLVGFDIDIANALCEEMKVE---CEFVTQDWDGMIPALQA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQA 152 + D + + T R + F Y + K + + LSG + Q+ Sbjct: 84 GKFDAVIASMSITEER--KQKVDFTNKYYNTPPAIGVPKDSKLAGVTKEDLSGILLGAQS 141 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT +F ++ +E R DA D+ L T + Sbjct: 142 STTHSNYAEAHFP----DAELKLYPTADEYKLDLENGRIDAVIEDVVVLSDWLATENGAC 197 Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 V +I+ AI +G+ E + + A+ Sbjct: 198 CKVLSTLKSDPVINGEGAGIAIRKGEDELKEMFNKAIVAI 237 >gi|116617768|ref|YP_818139.1| ABC-type amino acid transport system, permease and periplasmic component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096615|gb|ABJ61766.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 490 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 96/278 (34%), Gaps = 26/278 (9%) Query: 3 KDFFVSILCLI----ILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAE---VK 51 K + I+ + +L +A+ L IKK+G L G++ F V Sbjct: 6 KKISIVIMTITMLLPLLAVLPTHADAATTDPALTKIKKKGTLVIGLSADYAPFEFHATVN 65 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 GFDV+ + ++ + P + ALQ+ +ID++ + T RE Sbjct: 66 GRDQIVGFDVEMAKKIAKDLGVKP---VIKEMGFDGLIGALQTGKIDVIISGINATPERE 122 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS---GASICVQAGTTTELTLADYFKAHN 168 + F Q ++ KK L+ G I VQ TT E + Sbjct: 123 KV--VDFSNSYMKPLQTVMVLKKDASKYSGNLNSFSGKKIGVQKQTTQETYAQESM---- 176 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLA 227 + ++V ++ A + + A + +I P S ++ Sbjct: 177 SGSTIVSLQKVPDLVAQLSTGKIAGIVLNEPISKAYTQQ--NKAFKIIYPKPSSGEGAVS 234 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 A+ + ++ + ++ + EL QK N++ Sbjct: 235 IAMPKNSPVLKAKINKSLGNIIKSGELEAYQKRANKLM 272 >gi|237732343|ref|ZP_04562824.1| lysine-arginine-ornithine-binding periplasmic protein [Citrobacter sp. 30_2] gi|283832259|ref|ZP_06352000.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Citrobacter youngae ATCC 29220] gi|226907882|gb|EEH93800.1| lysine-arginine-ornithine-binding periplasmic protein [Citrobacter sp. 30_2] gi|291071900|gb|EFE10009.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Citrobacter youngae ATCC 29220] Length = 260 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 93/279 (33%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ ++ + + + L ++ G +T F+ A GD+ GFD Sbjct: 1 MKKTVLALSL---LVGLSATAASYAALPQ-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QIKCTWVASDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E D +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANDNWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + A R DA D A L ++ + + + D Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKDYAFAGPSVKDKKYFGDGTGIGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E EL ++++ N +V Sbjct: 226 AELKAAFDKAL------GELRKDGT-YDKMASKYFNFNV 257 >gi|167031269|ref|YP_001666500.1| cystine transporter subunit [Pseudomonas putida GB-1] gi|166857757|gb|ABY96164.1| extracellular solute-binding protein family 3 [Pseudomonas putida GB-1] Length = 264 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 74/227 (32%), Gaps = 12/227 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + L I+++G + G+ F+ NG GF+V+ L+ + + Sbjct: 25 AFAGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKLAGFEVELSELLAKELGVKA---KI 81 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGIS 138 P AL+SK++D++ + R+ + + K + I Sbjct: 82 QPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSEPYTVSGIQALILKKKAEQLNIK 141 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S L+G + V GT E + +E A R R DA D Sbjct: 142 SAQDLAGKKVGVGLGTNYEQWVKQDVPKA----EVRTYEDDPSKFADLRNGRIDAILIDR 197 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A + + D S+ A+ +G+ E ++ Sbjct: 198 LAALEYAQKAK---DTELAGDAFSRLESGVALRKGEPELLAAINKAI 241 >gi|251790578|ref|YP_003005299.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] gi|247539199|gb|ACT07820.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] Length = 273 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 76/259 (29%), Gaps = 20/259 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L L F S + S L +K+ G ++ + F+ + GFD Sbjct: 1 MKKLLALTALALSACFMLSAAQAGSTLERVKQTGVVRNVLFNDYPPFSYLDDKNQLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + + D+ + R L F Sbjct: 61 VDVANAVAKKLGTRLELATPGWETIVGGK---WQGRWDMCICSMTPNAERAKV--LDFST 115 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE-- 177 Y I+HK + I S + LS + + G++ E L K F Sbjct: 116 PYYSTFAVLIVHKDEKNIQSAADLSNKKVGLGLGSSYENYLNKSLAIPGGKPIDFPFNHV 175 Query: 178 -----RVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + R DA D + L P A Sbjct: 176 QAVPTDEDMAFRNLALGPGKRLDAVISDRITAKPRIEKLPQLRILQQL----YAEPNWIA 231 Query: 230 IIQGDTEWYNIVSWTHYAM 248 + +GD EW ++ A+ Sbjct: 232 VDKGDPEWSKTLADAISAL 250 >gi|227875261|ref|ZP_03993403.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Mobiluncus mulieris ATCC 35243] gi|306818523|ref|ZP_07452246.1| L-cystine ABC superfamily ATP binding cassette transporter, binding protein [Mobiluncus mulieris ATCC 35239] gi|227844166|gb|EEJ54333.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Mobiluncus mulieris ATCC 35243] gi|304648696|gb|EFM45998.1| L-cystine ABC superfamily ATP binding cassette transporter, binding protein [Mobiluncus mulieris ATCC 35239] Length = 305 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 32/260 (12%), Positives = 70/260 (26%), Gaps = 20/260 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGD---------IKKRG-FLKCGINTGLVGFAEVK 51 K ++ L + ++ K G G + + Sbjct: 31 KKLSAAGCAAILALTLGACGNTSASNDKNHSTDHASAAKAAGEKFTIGFDPNFPPYGYKD 90 Query: 52 AN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G++ GFD+D + ++ + K P++ + + L S +D L Sbjct: 91 EKTGEYVGFDIDLAKEVAKR---NEWKFVPQPIDWDAKDMELNSGTVDCLWNGFTINGRE 147 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL--ADYFKAHN 168 + + + F+ I+ L+G + VQA ++ L D + Sbjct: 148 DK---YTWSKPYVDNSIVFVTKTADKITDTKGLAGKHVLVQADSSGLTALENKDNKDLKD 204 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + + DA D+ ++ I+ Sbjct: 205 SFASLDQVPDYNQAFMNMESGAADAVAVDVGVANFQVQAREKGK-FTIMNPPFHTEQYGI 263 Query: 229 AIIQGDTEWYNIVSWTHYAM 248 +G+ + V M Sbjct: 264 GFKKGNESLRDQVQKALDEM 283 >gi|288574034|ref|ZP_06392391.1| extracellular solute-binding protein family 3 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569775|gb|EFC91332.1| extracellular solute-binding protein family 3 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 257 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 53/255 (20%), Positives = 94/255 (36%), Gaps = 24/255 (9%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGD 55 M+K F+S + L + S + L DI KRG + + + F V +GD Sbjct: 4 MFKTSASVRFISSVFLTVFLSASCAWAGDRLDDIVKRGEMVVAVGDFENEPFFFV-EDGD 62 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ-----SKQIDILSRNTDWTLLR 110 GFDVD R ++ I D ++++ + + D+ + R Sbjct: 63 LVGFDVDLGRMIAKEIGVD---VRFVRVPWDGLIALAWYSRYPWSRYDMAIASITIRQSR 119 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 F ++ GQ ++ ++ G + L G +I V AG+T T A Sbjct: 120 TR--ACDFSDWYFYTGQKLLVREEDGYETPLDLEGKTIAVMAGSTGYETAKRDLAA---- 173 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 +V + +E A RA R D D + + A D V L +++ + Sbjct: 174 -QTVVMDSPQETVDALRAGRVDGALSDATIVIAAAERYDG---LVALEGMVTTERYGVVL 229 Query: 231 IQGDTEWYNIVSWTH 245 +G+ + +V Sbjct: 230 PKGEEDLRKVVDSVV 244 >gi|327393261|dbj|BAK10683.1| glutamine-binding periplasmic protein precursor GlnH [Pantoea ananatis AJ13355] Length = 248 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 88/249 (35%), Gaps = 20/249 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F + + L F+ +T A L +T V F + + + GFDVD Sbjct: 2 KSLFNVSVAALALAFSLSATAAE--------KKLIVATDTAFVPFEFKQGD-KYVGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ++ +D+ T R+ + F Sbjct: 53 LWDAIAKELKLDY---TLKPMDFSGIIPALQTRNVDLALAGITITDERKK--AIEFSDGY 107 Query: 123 YFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ I S++ L+G + V++GT + DY K+H F ++ Sbjct: 108 YKSGLLVMVRNNENDIKSINDLNGKVVAVKSGTGSV----DYAKSHIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +R DA D + T + + D I A +G + V Sbjct: 164 AYMELGTNRADAVLHDTPNILYFINTAGKGR-FKAVGDSIEAQQYGIAFPKGSDDLREKV 222 Query: 242 SWTHYAMVT 250 + + Sbjct: 223 NGALKTLKE 231 >gi|322516686|ref|ZP_08069597.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] gi|322124787|gb|EFX96220.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] Length = 224 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 20/224 (8%) Query: 2 YKDFF----VSILCLIILFFTSF--STNASI--------LGDIKKRGFLKCGINTGLVGF 47 +K V+ L ++ +F S + + I KRG L G+ + F Sbjct: 3 FKKILRYLTVACLAIVTIFLISSHKTKAEDTSKLLDSKAVQKIVKRGTLNVGVKQDVPNF 62 Query: 48 AEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 A ++G +VD + ++ + K+ Y+P+ + R + + ID+L Sbjct: 63 GYYSAKTNSYEGMEVDLAKKIADEL---KVKVNYIPVTTQTREPLMDNGTIDLLIGTYTI 119 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ S + Y D GF++ K I+ +S L+G +I V G +T+ L +Y A Sbjct: 120 NDERKASYAI--SDPYYHDQIGFLVLKNSDINKISDLNGKTIGVSQGASTKAALQEYASA 177 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 HN+K++ + E+ + AHR +A++ D S L + + Sbjct: 178 HNLKFNYVQLGSFPELAVSLYAHRVNAFSVDKSILSGYESKKTK 221 >gi|320333844|ref|YP_004170555.1| ABC transporter periplasmic subunit [Deinococcus maricopensis DSM 21211] gi|319755133|gb|ADV66890.1| ABC-type transporter, periplasmic subunit family 3 [Deinococcus maricopensis DSM 21211] Length = 251 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 81/245 (33%), Gaps = 24/245 (9%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + ++ L LI S +A+ L G LK G+ F GFDVD Sbjct: 5 RTLMIAALALI------TSASAATLEK----GVLKIGMEGTYPPFTYKDEQNQLVGFDVD 54 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +A+++ + K +++ LQ+ + D++ T R+ S+ F Sbjct: 55 IAKAVAAKLG---LKTEFVLTEWSGILAGLQANKYDVIVNQVGVTAERQKSIA--FSTPY 109 Query: 123 YFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + I+ K +++ L G + V G+ E L D + + + Sbjct: 110 AYSSAQIIVRKNDNAAYKTLASLKGKRVGVGLGSNYEKMLRDA-----GGINVVTYPGAS 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E R DA D + + I +A A+ + +T+ Sbjct: 165 EYLRDLAVGRLDAALNDR-LMVGYFAKSQNLPV-KGAGVIEDPQAIAIALKKTNTDLKAK 222 Query: 241 VSWTH 245 + Sbjct: 223 IDRAL 227 >gi|295699112|ref|YP_003607005.1| cationic amino acid ABC transporter periplasmic binding protein [Burkholderia sp. CCGE1002] gi|295438325|gb|ADG17494.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. CCGE1002] Length = 260 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 43/255 (16%), Positives = 89/255 (34%), Gaps = 21/255 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L + ++ S +A I + G++ F A+G GFD Sbjct: 1 MKK--LLAALTVALIATVSIGAHAKDWSTI------RFGVDASYPPFESKGADGKLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + +K ++ + AL++K+ D + + T R + F Sbjct: 53 IDLGNEICKRVG---AKCVWVENDFDGMIPALKAKKFDGVLSSMSMTPQRAEQVA--FSS 107 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + + GI + L G S+ V+ GT E Y++ + ++ Sbjct: 108 KLFNTPTRLVAKQGSGILPTAESLKGKSVGVEQGTIQETYAKTYWEPKG--AKVVPYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +++ A + R DA D L R + + + + + + D Sbjct: 166 DQVYADLISGRLDAALQDAVQAEQGFLKTPRGAGFAFVGQNLDDPKILGNGAGIGMRKED 225 Query: 235 TEWYNIVSWTHYAMV 249 T+ V M+ Sbjct: 226 TDLKAKVDKAIADMI 240 >gi|293603253|ref|ZP_06685684.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292818342|gb|EFF77392.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 275 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 103/278 (37%), Gaps = 15/278 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59 M I + + + + +A + DIK RG CG F+ G+ Sbjct: 1 MKTTIASFIAAVGVAATLAPAAHADTVQDIKARGKFICGTMGTAEPFSFQDPKTRAIVGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VD C+A++ ++ ++ + + R L + ++D+++ N W E + + + Sbjct: 61 EVDMCQAVADSLG---VPLELKLIAVEARIPELIAGRVDVVAANLGW--SPERAQQIDYS 115 Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q + +K + + + L+G I G+++E + + P+ F+ Sbjct: 116 HQHFVSLQKILARESEKDLKAPADLAGKRISAVRGSSSEQ----GARKNIPNVEPVTFKD 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A + + + G L L+ IL + P + +GDT Sbjct: 172 PSGAFLALQQGKVSGFVGSELMLVKLQHQAASSAVPVKILQPALFVEPWGMGVRKGDTAM 231 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 N V+ M E G K ++ T +++R Sbjct: 232 LNQVNKVLDGM---EASGQATKVFDKWFGTGTQFNMKR 266 >gi|228922904|ref|ZP_04086201.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836760|gb|EEM82104.1| Arginine-binding extracellular protein artP [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 259 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 89/254 (35%), Gaps = 10/254 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKG 58 M K +S ++I+ S +N + L G + + V+A+ + G Sbjct: 1 MKKLVSISFALILIVSIFSACSNGEPKERKGNKKVLVMGTSADYKPYEYVEASKSDEIIG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD + + + + ++ ++ +L S ++D + T R+ + F Sbjct: 61 FDVDVAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERK--NNVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + K I SV L G + VQ G+ E A++ + + +R Sbjct: 116 TDIYFVAKNMVVSKKDSNIKSVEDLKGKKVGVQTGSIQEEKAAEF--KKQVDFQVEGRDR 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI +A R +A + + + + + + + A A+ + + Sbjct: 174 IPEIVQEIKAGRFEAAIIEDTVAKNYLEKMKD-LQGIEIKEAPEEVGAAIALPKNSDKTA 232 Query: 239 NIVSWTHYAMVTAE 252 E Sbjct: 233 EFNKVIKKMQENGE 246 >gi|269964162|ref|ZP_06178459.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio harveyi 1DA3] gi|269831117|gb|EEZ85279.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio harveyi 1DA3] Length = 243 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 89/258 (34%), Gaps = 25/258 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L+ S NA+ +IK + F + N +GFD Sbjct: 1 MKKILLASLIGLV-------SANAAAQEEIK------FAMEATYAPFEYMDENNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + + AL+ K+ D D T R + F Sbjct: 48 VDLANALCKEM---EAKCTFHNQSFDSLIPALKFKRYDAAISAMDITDAR--LEQVNFSD 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ K+ ++ L G + VQ G+T + L + + + + Sbjct: 103 PYYDNSAAFVSIKE-KVADQKALEGKRVGVQNGSTHQSYLIEQMP----GVTAVPYSSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238 + + R D+ GD + + D + + + A+ +G+ E Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEWFKKEDNLAYVGEHVTNPKYFGNGFGIAVNKGNDELV 217 Query: 239 NIVSWTHYAMVTAEELGI 256 N ++ + E + Sbjct: 218 NKLNTALKTVKANGEYDV 235 >gi|253686637|ref|YP_003015827.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753215|gb|ACT11291.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 255 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 72/246 (29%), Gaps = 15/246 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F L L TS +A L DIK G LK G + +G GFD Sbjct: 1 MKKIRF--ALLTSALLATSVFAHADDLSDIKSAGVLKIGTEGTYAPYTYHDKSGQLVGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RA++ + I+ + +K+ D + T R+ F Sbjct: 59 VDIGRAVAEKLGVKAQFIEGR---WDGLIAGIDAKRYDAVINQVGVTKERQA--KYDFSK 113 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ + S L G Q+ T+ A + A + + Sbjct: 114 PYIDSKAVLVVRGDNTTLKDFSDLKGKK-AAQSLTSNYSKQATSYGA-----DIVPTDGF 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R DA D + K I P A + + Sbjct: 168 NQSLDLVLSGRADATLNDNLSFLDFKKHKPDA-NVKIAATSKDGEPSAILVRKNQATLVE 226 Query: 240 IVSWTH 245 ++ Sbjct: 227 ALNKAL 232 >gi|170016503|ref|YP_001727422.1| amino acid ABC transporter periplasmic protein [Leuconostoc citreum KM20] gi|169803360|gb|ACA81978.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Leuconostoc citreum KM20] Length = 288 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 94/252 (37%), Gaps = 19/252 (7%) Query: 4 DFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58 +++ L +++ T+ + + L ++K G + G+ F + G +G Sbjct: 15 IVLAAVIVLGLMWATATAKQNEAHQDTLARVEKLGRIVWGVKADTKLFGLMNTKTGKPEG 74 Query: 59 FDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 FD+D +AL+ I P +++P++A + +++ ID T+ E Sbjct: 75 FDIDIAKALTVQISKQTGVPMSAEFVPVSASSKMQLIKNTNIDGSVS--TMTITPEREKI 132 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + GQ ++ K GI+SV ++ +I V GTT +A + Sbjct: 133 IDFTNQYFDAGQSILVKKDSGINSVKDMNDSKYTIIVVVGTTAATEIAKFAPKAK----V 188 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + A ++ + A + D + LY N ++ I + P A Sbjct: 189 LAVQDYATGMQALKSGQGQAMSTDNAILYGFATENP---DYHIAGGTFTHGPYGIAFDNN 245 Query: 234 DTEWYNIVSWTH 245 + Sbjct: 246 QKPMIREANKAL 257 >gi|23098331|ref|NP_691797.1| amino acid ABC transporter substrate-binding protein [Oceanobacillus iheyensis HTE831] gi|22776557|dbj|BAC12832.1| amino acid ABC transporter substrate-binding protein [Oceanobacillus iheyensis HTE831] Length = 296 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 36/267 (13%), Positives = 79/267 (29%), Gaps = 28/267 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----------------LGDIKKRGFLKCGINTG 43 M K + + IL + + +++ G L G + Sbjct: 5 MKKVMLSLFVLMFILLLAACGASEETGETPENSDNEETASDERWESVQQSGELVVGTSGT 64 Query: 44 LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 L+ + + G+DV+ + ++ + +I++ + A+QS +ID+ + + Sbjct: 65 LIAASYYDDEDELTGYDVEIMKEIAKRL---DVEIKFEIMGIDSMLPAVQSGRIDLAAND 121 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 + T R+ + + GI S+ L G A TT +A++ Sbjct: 122 IEITDKRKEQFNFSEPYKYSYATMAVRESDNSGIESLEDLEGKKAGGGA-TTIYSQIAEH 180 Query: 164 FKAHNMKYHPIVFER-VEEID-AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 + A + + E + R D D H+ Sbjct: 181 YGA-----EVVTYGNAPNEAYLSDVSNGRTDVVVNDYYLTKFGVAAFPDFDLHLHPTIKF 235 Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAM 248 S + + ++ M Sbjct: 236 HPSQQGVIMPKDADVMTEEINNVLQEM 262 >gi|327393303|dbj|BAK10725.1| arginine-binding periplasmic protein 1 precursor ArtI [Pantoea ananatis AJ13355] Length = 246 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 77/213 (36%), Gaps = 12/213 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ F V AN +GFDVD AL + + + +L+ Sbjct: 25 TIRIATEASYPPFEFVDANNKIQGFDVDLANALCKEM---DATCTFTNQAFDSLIPSLKF 81 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 ++ D + D T RE + F Y + F+ K ++SV L G + VQ GT Sbjct: 82 RRFDAVMAGMDITPEREK--QVLFSKPYYDNSAIFVAQKG-KVASVEALKGKRVGVQNGT 138 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PS 212 T + L D + + ++ + + R DA GD + + N P Sbjct: 139 THQKYLTD----KHADITVVPYDSYQNAVLDLKNGRIDAVFGDSAVVNEWLKQNANLAPV 194 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + L A+ QG+TE + + Sbjct: 195 GEKVTDKAYFGTGLGIAVRQGNTELQSKFNTAL 227 >gi|116751367|ref|YP_848054.1| extracellular solute-binding protein [Syntrophobacter fumaroxidans MPOB] gi|116700431|gb|ABK19619.1| extracellular solute-binding protein, family 3 [Syntrophobacter fumaroxidans MPOB] Length = 258 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 35/248 (14%), Positives = 83/248 (33%), Gaps = 13/248 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDV 61 K CL +L + + +++RG L G F +++GFDV Sbjct: 5 KRMVGLWTCLFLLTLPAVAAADDSWSKVQQRGELIVGFCAQYPPFESKNEKTAEFEGFDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +A++ + ++++ + L+ D+L + R + + + Sbjct: 65 DLGKAVARQMGVK---VKFVDAEWQGLLAGLKKGDYDVLITCMSKSEAR--NENVNMSDV 119 Query: 122 TYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ + + + L G + VQ G+ +E LAD + + Sbjct: 120 YYTLPDVIVVRQDESVIRDRDGLKGKIVGVQLGSGSEQ-LADKNREL--FKEIKRYNYNP 176 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E + R DA + ++ ++++ + +G Sbjct: 177 EAFTDLKHKRIDAVIVG---YAYAVNQIKTDPSYKVVGKPLAEADIVIVAARGADALTAR 233 Query: 241 VSWTHYAM 248 ++ + A+ Sbjct: 234 INQSLSAV 241 >gi|270262832|ref|ZP_06191103.1| hypothetical protein SOD_c04570 [Serratia odorifera 4Rx13] gi|270043516|gb|EFA16609.1| hypothetical protein SOD_c04570 [Serratia odorifera 4Rx13] Length = 260 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 86/251 (34%), Gaps = 23/251 (9%) Query: 1 MYKDFFVS-ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K V ++ + ++F+ S LK G + F A G+ GF Sbjct: 1 MKKLVKVLPLVLALSAVSSAFAALPST---------LKIGTDPTYAPFESKNAKGELVGF 51 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L I ++ ++ + +L++K+ID + + T R +AF Sbjct: 52 DIDLAKELCKRI---NTQCTFVESDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFT 106 Query: 120 PITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y I K + L G S+ V GTT E ++ + + ++ Sbjct: 107 DKLYAANARLIAPKGSKLLPTVDALKGKSVGVLQGTTQEAYANAMWQPKGI--TVVPYQN 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQG 233 + + A + R DA D A L ++ + + + + Sbjct: 165 QDLVYADLASGRIDAAFQDEVAGSDGFLKQPPGKDYAFAGESVKDDKFFGVGTGMGLRKT 224 Query: 234 DTEWYNIVSWT 244 DTE + Sbjct: 225 DTELKAALDKA 235 >gi|197118313|ref|YP_002138740.1| polar amino acid/opine ABC transporter periplasmic amino acid-binding protein [Geobacter bemidjiensis Bem] gi|197087673|gb|ACH38944.1| polar amino acid/opine ABC transporter, periplasmic amino acid-binding protein [Geobacter bemidjiensis Bem] Length = 248 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 75/249 (30%), Gaps = 18/249 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++++ + + A + + V AN GFD Sbjct: 1 MKAIRIMAVVVAFAGLCFASAALA-------APKTVTVATDATWPPMEFVDANKKIVGFD 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DF A++ + F + + Q D + + T R+ F Sbjct: 54 IDFMNAVAKEAGFQA---SFKNTAWDGIFAGIAAGQYDAIISSVTITDERKA--KFDFTV 108 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 GQ ++ K + + + L G I Q GTT + + ++ V Sbjct: 109 PYISIGQILVVPKAEKGTKIGDLKGKKIGAQIGTTGAMEIKKVA-----GVELKTYDEVG 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R D L + ++ I+ +K + +G+ E + Sbjct: 164 LAFEDMAAGRISGVVCDQPTAVTYALDKKEYSNKFKIVGQPFTKEAYGIVVKKGNKELVD 223 Query: 240 IVSWTHYAM 248 ++ A+ Sbjct: 224 QLNKGIAAV 232 >gi|332162248|ref|YP_004298825.1| arginine-binding periplasmic protein 2 precursor [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606311|emb|CBY27809.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Yersinia enterocolitica subsp. palearctica Y11] gi|325666478|gb|ADZ43122.1| arginine-binding periplasmic protein 2 precursor [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860382|emb|CBX70692.1| arginine-binding periplasmic protein 2 [Yersinia enterocolitica W22703] Length = 249 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 84/250 (33%), Gaps = 19/250 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +IL ++ T+ T S ++ + F + AN + GFD Sbjct: 1 MKKLLLAAILSGMVFSATAAETTHSTE-------TIRFAASATYPPFESIGANNEIVGFD 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + AL+ K+ D + D T R + F Sbjct: 54 MDLAKALCKQM---EANCTFTNQAFDSLIPALKFKRYDAVISGMDITPERSKQVA--FSQ 108 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K SS + L G I ++ GTT + L D + ++ + Sbjct: 109 PYYANSAIVIAPKG-KFSSFADLKGKKIGMENGTTHQKYLQDKHPE----IQTVAYDSYQ 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + TN + + L A+ +T Sbjct: 164 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPNLAAVGEHVTDPQYFGTGLGIAVRPDNTALL 223 Query: 239 NIVSWTHYAM 248 ++ A+ Sbjct: 224 EKLNKAIDAV 233 >gi|196249836|ref|ZP_03148532.1| extracellular solute-binding protein family 3 [Geobacillus sp. G11MC16] gi|196210712|gb|EDY05475.1| extracellular solute-binding protein family 3 [Geobacillus sp. G11MC16] Length = 273 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 77/254 (30%), Gaps = 15/254 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDI---KKRG-FLKCGINTGLVGFAEVKANGDWK 57 K F V+++ + + + + K+ + G + F + G Sbjct: 5 KKGFIVAVVAALFMALAACGKSTETTSSSGSEKETKQKITVGTDAAFAPFEYM-EKGKVV 63 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD D A+ D + F +LQSK+ID+ T R+ Sbjct: 64 GFDADLLDAVMKEAGLDYE---LKNIGWDPLFASLQSKEIDMGISGITITDKRK--QSYD 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + Q ++ + + + L G +I VQ TT + F H FE Sbjct: 119 FSAPYFEATQVILVKEGSPVKNALDLKGKTIGVQNATTGQEAAEKLF---GKGEHIKKFE 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTE 236 DA D + N VI PD + + D++ Sbjct: 176 TSVVAIMEMLNGGVDAVITDNAVANEYVKNNPDKKLQVIEDPDNFTSEYYGIIFPK-DSD 234 Query: 237 WYNIVSWTHYAMVT 250 V ++ Sbjct: 235 LKAKVDEALKNIIE 248 >gi|239834092|ref|ZP_04682420.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] gi|239822155|gb|EEQ93724.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] Length = 257 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 74/246 (30%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ +I + + L IK G LK G F + GFD Sbjct: 1 MKFAQILATAGIIQAVLLTGAMAGENLDAIKSAGVLKIGTEGTYAPFTYHDKDNKLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A+++ + P ++ L +K+ D + T R+ F Sbjct: 61 VEIGEAVAAKLGVKPE---FVEGKWDGLIAGLDAKRYDAVINQVGITEERQK--KFNFSN 115 Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + K I + L G Q+ T+ LA A + + Sbjct: 116 PYIVSKVVLIVNDKNDTIKDFADLKGKKSA-QSLTSNYGKLAKEAGA-----ELVATDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ R DA D + K + ++ + + + +GD E Sbjct: 170 DQSIQLVLTGRADATLNDSLSFLDFKKHQPKAPV-KVVAEKENADASGIIVRKGDDELVA 228 Query: 240 IVSWTH 245 ++ Sbjct: 229 AINKAL 234 >gi|88800984|ref|ZP_01116534.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Reinekea sp. MED297] gi|88776251|gb|EAR07476.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Reinekea sp. MED297] Length = 254 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 34/277 (12%), Positives = 83/277 (29%), Gaps = 27/277 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +++ + + + A I+ G++ F +G GF+ Sbjct: 1 MEQKMKKTLVAIAGALALTSAVEAKDWDTIRA------GVDAPYPPFEYKAPDGTLTGFE 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ + I +++ L +++ D++ + R+ + F Sbjct: 55 IELGNEVCKEITGKE--CEWVIQAWDGIIPGLLARKYDMIFSSMSINEERQK--RVLFSD 110 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y F + G I VQ T + + ++ + + + Sbjct: 111 PYYTTPSAFFSA---NAFDPADADGKRIGVQRATIQDTYVTEFLD----DAEIVRYTTAD 163 Query: 181 EIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 ++ + R DA D + + + V P I + A + D + Sbjct: 164 DMVVDLQGGRLDAMFVDAPVGLEMLGEDSDIVQVGDFVKEPVRIFGEGVGAAFRKRDKDL 223 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 VS A E +++ + D++ Sbjct: 224 EEAVS-------AALEKVKASGKYDEIMNRYFDFDIK 253 >gi|260768891|ref|ZP_05877825.1| amino acid ABC transporter amino acid-binding protein [Vibrio furnissii CIP 102972] gi|260616921|gb|EEX42106.1| amino acid ABC transporter amino acid-binding protein [Vibrio furnissii CIP 102972] gi|315180585|gb|ADT87499.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio furnissii NCTC 11218] Length = 258 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 45/231 (19%), Positives = 79/231 (34%), Gaps = 14/231 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ GI F+ +A+G KGFDVD AL + + + +P + Sbjct: 22 KEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCKEM---QVQCKIVPQDWDGIIP 78 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASIC 149 +L +++ D + T R+ + F FI K + + L G I Sbjct: 79 SLLARKYDAIIAAMSITEERKK--KVDFTNKYALIPNKFIAKKGAQLDFTKEGLKGVKIG 136 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 VQ TT + L D + + + +E R A GD SAL L Sbjct: 137 VQRATTHDKYLTDNY---GDAVEIVRYGSFDEAYLDLANGRIAAVLGDASALEDGVLNKP 193 Query: 210 RPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + ++ A + D + ++ A+ E Sbjct: 194 GGEGYEFVGPSLTDPKWFGDGFGIATRKQDKDLTEKLNAAIDALRAKGEYQ 244 >gi|256027993|ref|ZP_05441827.1| cyclohexadienyl dehydratase [Fusobacterium sp. D11] gi|289765938|ref|ZP_06525316.1| cyclohexadienyl dehydratase [Fusobacterium sp. D11] gi|289717493|gb|EFD81505.1| cyclohexadienyl dehydratase [Fusobacterium sp. D11] Length = 253 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 95/259 (36%), Gaps = 18/259 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V ++ ++ + N + I KRG L G + F + NG+ K +D Sbjct: 1 MKKILIVLLIAIVSVISY---ANNDGVEKILKRGVLYVGTTSDYKPFTYI-ENGEHKSYD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ + ++ + ++++P K LQ+ + DI T R+ + Sbjct: 57 IEVAKLIAKELGVK---VEFVPTTWKTLLDDLQAGKFDIAMGGITRTTKRQAICNM--TN 111 Query: 121 ITYFDGQGFIMHK--KKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 G+ F++ K K +S+ + + V G T E + +Y I + Sbjct: 112 PYLVFGKCFLVRKGDKNKYNSLEAVNKPNVRVGVNIGGTNEALVNEYITKA----TVIRY 167 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + ++ A D + + N + E +L ++KS + I + + Sbjct: 168 KNNLDVPVALEKGEVDVMITETPEAITYQKNNPK-LEGALLDKTLTKSQMGYMIAKENQH 226 Query: 237 WYNIVSWTHYAMVTAEELG 255 N V++ + E+ Sbjct: 227 LLNTVNFILSELELRGEIE 245 >gi|229028649|ref|ZP_04184763.1| Extracellular solute-binding protein family 3 [Bacillus cereus AH1271] gi|228732668|gb|EEL83536.1| Extracellular solute-binding protein family 3 [Bacillus cereus AH1271] Length = 265 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ +S + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELAEEVSKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSSPYVSSSAVLVIAKDKDKPATFADVKGLK-AAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 E + R D +T + L + ++ I+ S Sbjct: 170 EITNVEGFSQAAELLNTGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G + V+ Sbjct: 229 KGSDKLVQEVNKAL 242 >gi|110798792|ref|YP_696773.1| His/Glu/Gln/Arg/opine amino acid ABC transporter amino acid-binding protein/permease [Clostridium perfringens ATCC 13124] gi|168208796|ref|ZP_02634421.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens B str. ATCC 3626] gi|168212869|ref|ZP_02638494.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens CPE str. F4969] gi|168215721|ref|ZP_02641346.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens NCTC 8239] gi|110673439|gb|ABG82426.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens ATCC 13124] gi|170713169|gb|EDT25351.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens B str. ATCC 3626] gi|170715496|gb|EDT27678.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens CPE str. F4969] gi|182382310|gb|EDT79789.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens NCTC 8239] Length = 502 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 89/254 (35%), Gaps = 16/254 (6%) Query: 1 MYKDFFVSILCL--IILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWK 57 M K + L + +++ S N++ + + + F + G+ K Sbjct: 1 MKKKLMLLFLTISILMMVLVGCSNNSNNIQKNSTNKEKITVATSGTYYPFTFL-EGGELK 59 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GF+VD + + D +++ + F L+S +++ ++ T RE Sbjct: 60 GFEVDVWNEIGKRLGYD---VEFKTASFSGLFGMLESGKVNTIANQITVTPEREE--KYY 114 Query: 118 FRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G I+ K I S L G + V G+ E + D K N + + + Sbjct: 115 FSEPYVYSGAQIIVKKGNDSIKSFDDLKGKKVGVDLGSNYEKIVKD--KDENNEIKILTY 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD-- 234 + + R DA D + A+ ++ + + I K A ++ + Sbjct: 173 QNTDAAFNELLLGRIDAVVIDRVS--AIAAIKEKDLNLQLAGEPIDKIENAYPFVKDEKG 230 Query: 235 TEWYNIVSWTHYAM 248 + V+ M Sbjct: 231 KDLSENVNKALDEM 244 >gi|329770428|ref|ZP_08261810.1| hypothetical protein HMPREF0433_01574 [Gemella sanguinis M325] gi|328836551|gb|EGF86211.1| hypothetical protein HMPREF0433_01574 [Gemella sanguinis M325] Length = 273 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 46/283 (16%), Positives = 100/283 (35%), Gaps = 24/283 (8%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGD 55 M K F SI+ + L S S++ + L ++K +G + G++ + + N Sbjct: 1 MKKLILFITSIITVFTLTACSSSSSKNKLEEVKSKGKIVLGVSPDYAPYEFLTTENGNKK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G D+ ++ + +++ + +L + ++D++ + T R+ Sbjct: 61 VVGADIYLAEQIAKKL---DVEVEIQEMGFDSLIASLNANKVDMVISGINPTDERKK--A 115 Query: 116 LAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F + Y F+++K I SV L + VQ G+T E + K + + Sbjct: 116 VDFSDVYYTGKGIFVVNKDSDEIKSVDDLKNKKVGVQKGSTYETYAKEQLKIA--ESNIQ 173 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAI 230 V + + + D K+ ++ S+ I P +A A Sbjct: 174 SLTDVPSLLQDLKNKKIDVVLIPDDV---AKIAMNKYSDIKISSFTADNDPEATGMAIAF 230 Query: 231 IQGDT----EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 +G E V+ + +E Q++ + Sbjct: 231 KKGKDDSNKELLEQVNSVIKEIQEKKEFEKQLDKYAQIAAQSE 273 >gi|322419251|ref|YP_004198474.1| family 3 extracellular solute-binding protein [Geobacter sp. M18] gi|320125638|gb|ADW13198.1| extracellular solute-binding protein family 3 [Geobacter sp. M18] Length = 247 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 79/249 (31%), Gaps = 19/249 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ + + L F S + A + + V AN GFD Sbjct: 1 MKSLRIMAAVLALGLCFVSAALAAP--------KAITVASDATWPPMEFVDANKKIVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DF A++ ++ + F +++ Q D + + T R+ F Sbjct: 53 IDFMTAVAKEAG---LQVTFKNTAWDGIFAGVEAGQYDAIISSVTITPERQA--KYDFTA 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 GQ ++ K + + ++ L G I Q GTT + + ++ V Sbjct: 108 PYVNIGQILVVPKAEKGTKIADLKGKKIGAQIGTTGAMEVKKVA-----GVELKTYDEVG 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R D L ++ I+ +K + +G+ + Sbjct: 163 LAFEDMAAGRIAGVVCDEPTAVTYALQKKEYSTKFKIVGKPFTKEAYGIVVKKGNKDLVA 222 Query: 240 IVSWTHYAM 248 ++ A+ Sbjct: 223 QLNKGIAAV 231 >gi|229131788|ref|ZP_04260662.1| Extracellular solute-binding protein family 3 [Bacillus cereus BDRD-ST196] gi|228651682|gb|EEL07645.1| Extracellular solute-binding protein family 3 [Bacillus cereus BDRD-ST196] Length = 265 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + N L IK+ G L G F Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTANQDALQKIKQSGELVIGTEGTYPPFTFHDT 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 N GFDV+ ++ + P + + +K+ D+++ + Sbjct: 61 NDKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGIDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSSPYISSSAALVIAKDKDKPATFADVKGLK-AAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 E + + R D +T + L + ++ I+ S Sbjct: 170 EITGVEGFSQAAELLSSGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G + V+ Sbjct: 229 KGSDKLVQEVNKAL 242 >gi|222082457|ref|YP_002541822.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221727136|gb|ACM30225.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 275 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 77/239 (32%), Gaps = 10/239 (4%) Query: 1 MYK-DFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + ++ LF + S A L +K G LK G T F + A G+ G Sbjct: 1 MKRNSLLKGLVGAAFLFGATLSAHAADTLAAVKAAGTLKVGTETAFAPFDFIDA-GEHAG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +VD + + I+++ L F AL++ + DI++ T R F Sbjct: 60 LNVDLFAEIGKELGVK---IEWVALPWDGVFPALEAGKFDIVAGPATITKKR--MERYRF 114 Query: 119 RPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 P + I+ ++G I V T+ L ++ K + Sbjct: 115 TPPIAEATIAILKKAGDTTINKPEDIAGKKIGVGKATSQLDQLKEFSDTLPTKAEIREYP 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E A A R + + + V+LP KS ++ Sbjct: 175 AFTESYADLAAGRIAGVANSLPNIA-FVAKQREGTFEVVLPPFGKKSYFGFIGLKDADH 232 >gi|283784630|ref|YP_003364495.1| arginine ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] gi|282948084|emb|CBG87649.1| arginine ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] Length = 243 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 82/249 (32%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + F Sbjct: 48 VDLANALCKEI---DATCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI + +SV QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFIGQQG-KFTSVEQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWL--KDNPKLAPVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTH 245 + Sbjct: 216 LQQKFNAAL 224 >gi|224827116|ref|ZP_03700212.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] gi|224600625|gb|EEG06812.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] Length = 254 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 74/251 (29%), Gaps = 25/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L L S + L+ + F++ +G GFD Sbjct: 1 MKQPLLTLGALLCALTAASHAE------------TLRFATDASYPPFSQQGPDGKMAGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D RAL +A+ P + AL +K+ D++ + + T R+ + F Sbjct: 49 PDIARALCAAM---KVTCDVEPQDFDGIIPALNAKKFDVIIASMNITDERKK--AVNFSD 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + ++ G I V + E D++ + + + Sbjct: 104 KYYNMPSRLVAKAGTAVNDA-WFKGKKIGVLRSSIQEKYARDHWVKLG--AKLVPYGKAP 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 E +A R DA D + L +++ A+ + D Sbjct: 161 ESFLDLKAGRVDASFVDAAVGDTDFLKTANGKGFAFAGPAYNEAKYFGEGAGIAVRKTDA 220 Query: 236 EWYNIVSWTHY 246 ++ Sbjct: 221 ALLERINKALK 231 >gi|302024591|ref|ZP_07249802.1| amino-acid ABC transporter extracellular-binding protein [Streptococcus suis 05HAS68] Length = 202 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 70/205 (34%), Gaps = 15/205 (7%) Query: 1 MYKDFFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M+ ++ + L ++ ST+ ++L IK+ G ++ G ++ +G Sbjct: 1 MFTSLLLAGIVLAACNSSAGISNSTDQTLLAQIKEEGVIQIGTEGAYAPYSYHDESGKLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+DV+ A++ + ++++ L + + D ++ T R+ Sbjct: 61 GYDVEVAEAVAEKLGVK---VEFVETEWDSMIAGLDAARFDTIANQVGITDERKA--KYD 115 Query: 118 FRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + + K I+S + LSG + AD + + + Sbjct: 116 FSTPYTYIYGALVTQKDNTDITSFADLSGKKSANSLTS----NWADLARENG--AEVVGV 169 Query: 177 ERVEEIDAAYRAHRCDAYTGDISAL 201 + + R DA D Sbjct: 170 DGFSQAVELLNTGRVDATINDNLVY 194 >gi|182435530|ref|YP_001823249.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326776167|ref|ZP_08235432.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces cf. griseus XylebKG-1] gi|178464046|dbj|BAG18566.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326656500|gb|EGE41346.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces cf. griseus XylebKG-1] Length = 307 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 75/238 (31%), Gaps = 15/238 (6%) Query: 15 LFFTSFSTNASILG-----DIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALS 68 T + L K+RG L G A + GFD++ + ++ Sbjct: 45 ALPTYTAAKDVTLDSPVFKKAKERGKLVIGAKADQPYLGFEDQATKERSGFDIEIAKMIA 104 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + + +I++ +++ R A+ Q+D R+ +G F Y G Sbjct: 105 ADLGFSDKQIEWKTVDSGVRETAISKGQVDYYVGTYTINDERKKQVG--FAGPYYKAGAD 162 Query: 129 FIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 ++ K + + G +C G+T + + + + Sbjct: 163 LLVRKDDKSITGKDSVKGKKVCSIVGSTPLQEIKKPE----YGASVVELAKYSDCVQQLL 218 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + DA T D S L + ++ D + P + + D +S + Sbjct: 219 TKQVDAVTTDDSILKGYAAA--NSGKLHVVGDPFTDEPYGVGLNKDDKVLREAISKSL 274 >gi|289168796|ref|YP_003447065.1| ABC transporter substrate-binding protein [Streptococcus mitis B6] gi|288908363|emb|CBJ23205.1| ABC transporter substrate-binding protein [Streptococcus mitis B6] Length = 268 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 86/261 (32%), Gaps = 16/261 (6%) Query: 2 YKDFFVSILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 K +++ L++L F + ++ + IK +G L +N F V Sbjct: 4 IKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+++ + + ++ P++ ++QS + D+ T R Sbjct: 64 VGSDIELAKAIATELGVE---LELSPMSFDNVLASVQSGKADLAISGVSKTDERSKV--F 118 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K SV+ L+ + Q G+ E D + Sbjct: 119 DFSVPYYTSKNKVIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLL----QNSSLV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + ++ + DA + N + I D A A+ + Sbjct: 175 SLPKNGNLITDLKSGQLDAVIFEEPVAKGFVENNPDLAIAEIEFDQEKDDSYAVAMKKDS 234 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 E V + + +L Sbjct: 235 KELKAAVDQAIQKLKDSGDLE 255 >gi|170683620|ref|YP_001742971.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Escherichia coli SMS-3-5] gi|170521338|gb|ACB19516.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli SMS-3-5] Length = 243 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 86/249 (34%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + F Sbjct: 48 VDLAQALCKEI---DATCTFSNQAFDRLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D+ GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTH 245 ++ Sbjct: 216 LQQKLNTAL 224 >gi|18311075|ref|NP_563009.1| amino acid ABC transporter [Clostridium perfringens str. 13] gi|18145757|dbj|BAB81799.1| probable amino acid ABC transporter [Clostridium perfringens str. 13] Length = 502 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 89/254 (35%), Gaps = 16/254 (6%) Query: 1 MYKDFFVSILCL--IILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWK 57 M K + L + +++ S N++ + + + F + G+ K Sbjct: 1 MKKKLMLLFLTISILMMVLVGCSNNSNNIQKNSTNKEKITVATSGTYYPFTFL-EGGELK 59 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GF+VD + + D +++ + F L+S +++ ++ T RE Sbjct: 60 GFEVDVWNEIGKRLGYD---VEFKTASFSGLFGMLESGKVNTIANQITVTPEREE--KYY 114 Query: 118 FRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G I+ K I S L G + V G+ E + D K N + + + Sbjct: 115 FSEPYVYSGAQIIVKKGNDSIKSFDDLKGKKVGVDLGSNYEKIVKD--KDENNEIKILTY 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD-- 234 + + R DA D + A+ ++ + + I K A ++ + Sbjct: 173 QNTDAAFNELLLGRIDAVVIDRVS--AIAAIKEKDLNLQLAGEPIDKIENAYPFVKDEKG 230 Query: 235 TEWYNIVSWTHYAM 248 + V+ M Sbjct: 231 KDLSENVNKALDEM 244 >gi|269978150|ref|ZP_06185100.1| polar amino acid ABC transporter periplasmic substrate-binding protein [Mobiluncus mulieris 28-1] gi|269933659|gb|EEZ90243.1| polar amino acid ABC transporter periplasmic substrate-binding protein [Mobiluncus mulieris 28-1] Length = 278 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 32/260 (12%), Positives = 70/260 (26%), Gaps = 20/260 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGD---------IKKRG-FLKCGINTGLVGFAEVK 51 K ++ L + ++ K G G + + Sbjct: 4 KKLSAAGCAAILALTLGACGNTSASNDKNHSTDHASAAKAAGEKFTIGFDPNFPPYGYKD 63 Query: 52 AN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G++ GFD+D + ++ + K P++ + + L S +D L Sbjct: 64 EKTGEYVGFDIDLAKEVAKR---NEWKFVPQPIDWDAKDMELNSGTVDCLWNGFTINGRE 120 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL--ADYFKAHN 168 + + + F+ I+ L+G + VQA ++ L D + Sbjct: 121 DK---YTWSKPYVDNSIVFVTKTADKITDTKGLAGKHVLVQADSSGLTALENKDNKDLKD 177 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + + DA D+ ++ I+ Sbjct: 178 SFASLDQVPDYNQAFMNMESGAADAVAVDVGVANFQVQAREKGK-FTIMNPPFHTEQYGI 236 Query: 229 AIIQGDTEWYNIVSWTHYAM 248 +G+ + V M Sbjct: 237 GFKKGNESLRDQVQKALDEM 256 >gi|228938117|ref|ZP_04100737.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970992|ref|ZP_04131629.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977595|ref|ZP_04137987.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis Bt407] gi|228782239|gb|EEM30425.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis Bt407] gi|228788801|gb|EEM36743.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821602|gb|EEM67607.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938618|gb|AEA14514.1| cystine-binding protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 265 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 76/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELSEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 I E + + R D +T + L + ++ I+ S Sbjct: 170 EIIGVEGFSQAAELLASGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G + V Sbjct: 229 KGSDKLVQEVDKAL 242 >gi|229016184|ref|ZP_04173136.1| Extracellular solute-binding protein family 3 [Bacillus cereus AH1273] gi|229022420|ref|ZP_04178958.1| Extracellular solute-binding protein family 3 [Bacillus cereus AH1272] gi|228738901|gb|EEL89359.1| Extracellular solute-binding protein family 3 [Bacillus cereus AH1272] gi|228745138|gb|EEL95188.1| Extracellular solute-binding protein family 3 [Bacillus cereus AH1273] Length = 265 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDT 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 N GFDV+ ++ + P + + +K+ D+++ + Sbjct: 61 NDKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGIDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSSPYISSSAALVIAKDKDKPATFADVKGLK-AAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 E + + R D +T + L + ++ I+ S Sbjct: 170 EITGVEGFSQAAELLSSGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G + V+ Sbjct: 229 KGSDKLVQEVNKAL 242 >gi|170740012|ref|YP_001768667.1| extracellular solute-binding protein [Methylobacterium sp. 4-46] gi|168194286|gb|ACA16233.1| extracellular solute-binding protein family 3 [Methylobacterium sp. 4-46] Length = 273 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 76/235 (32%), Gaps = 12/235 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 A+ +IK RG L G+ T F A+ G+DVD R + ++ + + Sbjct: 29 PAEAATPDEIKARGKLVVGVLTDYPPFGGTDADQKPAGYDVDVARLFAKSLGVELDLVP- 87 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + R L + ++D+L T R S + F + K +S Sbjct: 88 --VTGPNRIPYLLTNKVDMLIATFGITAER--SKQVLFSNPYSTLSTYVLGPKSLAVSKP 143 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G +I V +T + ++ + F+ A + + + + Sbjct: 144 EDLKGVTIGVARASTQDTAVSAVAP---PGTRIMRFDDDATTTQAIISGQVQSIGASNTV 200 Query: 201 LYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 L L + I P + A + DT + + + EL Sbjct: 201 LAQL---TKDYASLGIEPKFNLREQANGMAFRKADTALRDRANAFIAEIAGNGEL 252 >gi|322373064|ref|ZP_08047600.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C150] gi|321278106|gb|EFX55175.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus sp. C150] Length = 283 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 79/256 (30%), Gaps = 18/256 (7%) Query: 1 MYKDFFVS----------ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV 50 M K + F+T K +K G + V Sbjct: 1 MKKIVKTVLLGCLVLLPLFALSACSSRSHFATQKDQWQTYTKEKKIKIGFDATFVPMGYE 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + NG + GFD+D A+ D +++ ++ + L++ ID++ T R Sbjct: 61 EKNGSYVGFDIDLATAVFKLYGID---VEWQAIDWDMKETELKNGTIDLIWNGYSVTDER 117 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM- 169 + F + Q + K GI SV+ +SG ++ QAG++ K Sbjct: 118 K--QSADFTEPYMINEQVLVTKKSSGIDSVAGMSGKTLGAQAGSSGYDAFNASPKILKNI 175 Query: 170 --KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + + + R D D + ++ ++P A Sbjct: 176 VANQKAVQYSTFTQALIDLESGRIDGLLIDRVYANYYLEKSGVLDQYNVMPAGYEGESFA 235 Query: 228 PAIIQGDTEWYNIVSW 243 + D ++ Sbjct: 236 VGARKSDKTLITKINQ 251 >gi|198242827|ref|YP_002216427.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|207857773|ref|YP_002244424.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|197937343|gb|ACH74676.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|206709576|emb|CAR33921.1| lysine-arginine-ornithine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 260 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 91/279 (32%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + + + ++ G +T F+ A G++ GFD Sbjct: 1 MKKTVLALSLLIGLGATAASYAALPQ--------TVRIGTDTTYAPFSSKDAKGEFIGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I ++ L G + V G+T E D ++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + A R DA D A L E+ + + + D Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE EL ++++K + +V Sbjct: 226 TELKAAFDKALI------ELRQDGT-YDKMAKKYFDFNV 257 >gi|150398048|ref|YP_001328515.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150029563|gb|ABR61680.1| extracellular solute-binding protein family 3 [Sinorhizobium medicae WSM419] Length = 275 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 43/273 (15%), Positives = 85/273 (31%), Gaps = 28/273 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F + + L F + + L + + + N+G + + + + GFD Sbjct: 1 MKGLFAKLAIGVAALAFVTAAQAGETLDRVMGKKAMVVATNSGWPPQSFLDDSNELVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + + + + + + D+ + T R + + F Sbjct: 61 IDVSKEIAKRLGVE---VSFETPDWATLTGGRWQGRYDLGVGSVTPTKAR--AQVIDFVG 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF---- 176 I YF +++HK SV L+G I V+ TT+E + + PI + Sbjct: 116 IYYFSPYVYVLHKDSQAKSVGDLNGKKIGVETATTSEDFIRRRLEIDAPGLPPIEYKIEP 175 Query: 177 ---ERVEEI---DAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPL 226 + R R DA +L + + PL Sbjct: 176 GEVRTYADSMLPFDDLRIGDGTRLDAVIAPE---QTALNAIKNGYPLRVLEGEYAFREPL 232 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 + D +W V EE+ Sbjct: 233 VVIAEKVDPDWTKKVGAVI------EEMKTDGT 259 >gi|47640|emb|CAA24651.1| unnamed protein product [Salmonella enterica subsp. enterica serovar Typhimurium] gi|154124|gb|AAA75577.1| LAO protein [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 260 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 91/279 (32%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + + + ++ G +T F+ A G++ GFD Sbjct: 1 MKKTVLALSLLIGLGATAASYAALPQ--------TVRIGTDTTYAPFSSKDAKGEFIGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K + ++ L G + V G+T E D ++ + + + Sbjct: 108 KLYAADSRLIAAKGSPVQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + A R DA D A L E+ + + + D Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE EL ++++K + +V Sbjct: 226 TELKAAFDKALT------ELRQDGT-YDKMAKKYFDFNV 257 >gi|242241096|ref|YP_002989277.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] gi|242133153|gb|ACS87455.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] Length = 256 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 77/246 (31%), Gaps = 14/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + +L S L IK G +K G + +G GFD Sbjct: 1 MKK-VSSALLSVALLTTAFASHAQDDLSAIKAAGVIKFGTEGTYAPYTYHDQSGKLVGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ RA++ + ++ + +K+ D + T R+ F Sbjct: 60 VEIGRAVAEKLGVKAE---FVEGRWDGLIAGVDAKRYDAVINQVGVTKERQA--KFDFSK 114 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ I + +L G Q+ T+ LA + A+ + + Sbjct: 115 PYIDARSVLIVRGDNTTIKNFDELKGRKSA-QSLTSNYSKLATSYGAN-----IVPTDGF 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R DA D + K ++ S P A + + + Sbjct: 169 NQSLELVLSGRADATLNDNLSFLDFKKHKPDA-NVKVVATAESGDPSAILVRKNQPQLVE 227 Query: 240 IVSWTH 245 ++ Sbjct: 228 ALNSAL 233 >gi|190895140|ref|YP_001985433.1| putative amino acid ABC transporter substrate-binding protein [Rhizobium etli CIAT 652] gi|190700801|gb|ACE94883.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] Length = 282 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 42/243 (17%), Positives = 88/243 (36%), Gaps = 15/243 (6%) Query: 2 YKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + F + + FT S A+ L +IKK+G + GI T F+ + A+G + Sbjct: 10 RRTFLAFSSLALAIAFTGASHIRQAGAATLDEIKKKGTITFGIVTDQPPFSFINASGQNE 69 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+D+D + ++ + + Y+P+ + R L + ++D+L + + + Sbjct: 70 GYDIDLSKLMAKELGVEA---AYVPITSANRIPQLMTGKVDMLICVMGV--YPDRAKVVQ 124 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + K G++ V +LSG SI V+ G++ + + D F+ Sbjct: 125 YVAPYAEINAAIYGPKDGGVTKVEELSGHSIAVEKGSSMDKAVTDAAPK---DATIQRFD 181 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A + + + ++ I+ +S A+ E Sbjct: 182 DASSAVQALLSGQVEYLGSYSHQFGGVEKAAPGKYAQKIV---LSTEYEGIAVRPKSEEL 238 Query: 238 YNI 240 Sbjct: 239 GKW 241 >gi|82777621|ref|YP_403970.1| arginine 3rd transport system periplasmic binding protein [Shigella dysenteriae Sd197] gi|309785094|ref|ZP_07679727.1| arginine-binding periplasmic protein 1 [Shigella dysenteriae 1617] gi|81241769|gb|ABB62479.1| arginine 3rd transport system periplasmic binding protein [Shigella dysenteriae Sd197] gi|308927464|gb|EFP72938.1| arginine-binding periplasmic protein 1 [Shigella dysenteriae 1617] Length = 243 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 85/249 (34%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + F Sbjct: 48 VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWL--KDNPKLEAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTH 245 ++ Sbjct: 216 LQQKLNTAL 224 >gi|326803928|ref|YP_004321746.1| ABC transporter glutamine-binding protein GlnH [Aerococcus urinae ACS-120-V-Col10a] gi|326650155|gb|AEA00338.1| ABC transporter glutamine-binding protein GlnH [Aerococcus urinae ACS-120-V-Col10a] Length = 280 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 87/218 (39%), Gaps = 11/218 (5%) Query: 35 FLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F G+ +GFD+D + L+ I ++ +++ + +K R L+ Sbjct: 43 KIRWGVKVDTNLFGFYNIEKGEVEGFDIDIAKELTKRIVGPNAQAEFVEVTSKTRIPLLK 102 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQA 152 + ID + + R+ + F I + GQ ++ + V L ++ Sbjct: 103 NANIDAIIATMTISDERKK--QVDFSDIYFNAGQALLVGPDVKLKGVEDLGPDHTVLAVK 160 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T+ + ++ + E E A ++ + A T D + L + + + P Sbjct: 161 GSTSAQRIKEHAPEAK----VLELENYSEAFTALKSGQGQAMTTDNAILLGI--SKENP- 213 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 ++ I ++ P A+ +G ++ ++ MV Sbjct: 214 DYHIAGSTFTREPYGIAVNKGQDDFRQAINQGLKDMVA 251 >gi|270261144|ref|ZP_06189417.1| hypothetical protein SOD_a03690 [Serratia odorifera 4Rx13] gi|270044628|gb|EFA17719.1| hypothetical protein SOD_a03690 [Serratia odorifera 4Rx13] Length = 243 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 82/249 (32%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L I + ++ ++ F + A +GFD Sbjct: 1 MKKLIIAAVLAGISVSASAAE-------------TIRFATEASYPPFEFIDAGNKIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I D + +L+ K+ D + D T RE + F Sbjct: 48 VDLANALCKEIQAD---CTFTNQAFDSLIPSLKFKRFDAVMAGMDITPEREK--QVLFTK 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ K ++ V+ L G + VQ GTT + L D + ++ + Sbjct: 103 PYYDNSALFVAQKG-KVADVAALKGKKVGVQNGTTHQKYLTDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R DA GD + + + + + K L A+ Q +TE Sbjct: 158 NAILDLKNGRVDAVFGDTAVVNEWLKQ--NAALAAVGDKVTDKDYFGTGLGIAVRQKNTE 215 Query: 237 WYNIVSWTH 245 + Sbjct: 216 LQGKFNAAL 224 >gi|116748259|ref|YP_844946.1| extracellular solute-binding protein [Syntrophobacter fumaroxidans MPOB] gi|116697323|gb|ABK16511.1| extracellular solute-binding protein, family 3 [Syntrophobacter fumaroxidans MPOB] Length = 268 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 84/255 (32%), Gaps = 19/255 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTN--------ASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M++ ++ +L + S+L + KR L G+ F Sbjct: 1 MFRKCLSALWVPALLLTCGIAFAVTPFEVFDGSVLNQVIKRNKLMVGMEVKFFPFEYADE 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G GFDV+ + + + ++ + ALQ ++D++ TL R Sbjct: 61 KGRPLGFDVEIAGLAAKELGVE---LEIKDMEFSGLIPALQGGKVDMIISGMTRTLTRAK 117 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMK 170 ++ + + V +L G I V+ GTT +L A F Sbjct: 118 TVSFTQAYFETGLCALLSNRRAPDVKDVKELNAPGRVIAVKLGTTGDLVTAKMFPEA--- 174 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 ++ R DA+ D L K + P + + P A AI Sbjct: 175 -QVNRYKEETACVREVVTGRADAFLYD--QLSIGKHHKENPDTTHAVLTPFTYEPFAIAI 231 Query: 231 IQGDTEWYNIVSWTH 245 +GD ++ N ++ Sbjct: 232 RKGDPDFLNWLNQFL 246 >gi|91225767|ref|ZP_01260796.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio alginolyticus 12G01] gi|91189656|gb|EAS75931.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio alginolyticus 12G01] Length = 243 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 89/258 (34%), Gaps = 25/258 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L+ S NA+ +IK + F + N +GFD Sbjct: 1 MKKILLASLIGLV-------SANAAAQEEIK------FAMEATYAPFEYMDENNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + + AL+ K+ D D T R + F Sbjct: 48 VDLANALCKEM---EAKCTFHNQSFDSLIPALKFKRYDAAISAMDITDAR--LEQVNFSD 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ K+ ++ L G + VQ G+T + L + + + + Sbjct: 103 PYYDNSAAFVSIKE-KVADQKALEGKRVGVQNGSTHQSYLIEQMP----GVTAVPYSSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWY 238 + + R D+ GD + + D + + + A+ +G+ E Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEWFKKEDNLAYVGDHVTNPKYFGNGFGIAVNKGNDELV 217 Query: 239 NIVSWTHYAMVTAEELGI 256 N ++ + E + Sbjct: 218 NKLNTALKTVKANGEYDV 235 >gi|325272375|ref|ZP_08138773.1| cystine transporter subunit [Pseudomonas sp. TJI-51] gi|324102500|gb|EGB99948.1| cystine transporter subunit [Pseudomonas sp. TJI-51] Length = 264 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 73/229 (31%), Gaps = 12/229 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + L I+++G + G+ F+ NG GF+V+ L+ + Sbjct: 23 CQAFAGEELKTIQEKGVINVGLEGTYPPFSFQDENGKLTGFEVELSELLAKELGVKA--- 79 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKG 136 + P AL+SK++DI+ + R+ + + K + Sbjct: 80 KIQPTKWDGILAALESKRLDIVVNQVTISEERKKKYDFSEPYTISGIQALILKKKAEQLN 139 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+ L+G + V GT E + +E A R R DA Sbjct: 140 INGAQDLAGKKVGVGLGTNYEQWVKQDVPKA----EVRTYEDDPSKFADLRNGRIDAILI 195 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D A + + S+ A+ +G+ E ++ Sbjct: 196 DRLAALEYAQKAK---DTELAGPAFSRLESGVALRKGEPELLAAINKAI 241 >gi|26246886|ref|NP_752926.1| arginine-binding periplasmic protein 1 [Escherichia coli CFT073] gi|91209897|ref|YP_539883.1| arginine-binding periplasmic protein 1 [Escherichia coli UTI89] gi|110641064|ref|YP_668794.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli 536] gi|110804860|ref|YP_688380.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 5 str. 8401] gi|117623043|ref|YP_851956.1| arginine transporter subunit [Escherichia coli APEC O1] gi|191172067|ref|ZP_03033611.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli F11] gi|193069380|ref|ZP_03050335.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli E110019] gi|194433081|ref|ZP_03065363.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Shigella dysenteriae 1012] gi|215485994|ref|YP_002328425.1| arginine transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|218557767|ref|YP_002390680.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|218688645|ref|YP_002396857.1| arginine ABC transporter subunit periplasmic-binding protein [Escherichia coli ED1a] gi|218699239|ref|YP_002406868.1| arginine ABC transporter subunit periplasmic-binding protein [Escherichia coli IAI39] gi|218704290|ref|YP_002411809.1| arginine ABC transporter periplasmic-binding protein [Escherichia coli UMN026] gi|227884173|ref|ZP_04001978.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli 83972] gi|237707173|ref|ZP_04537654.1| arginine-binding periplasmic protein 1 [Escherichia sp. 3_2_53FAA] gi|293404168|ref|ZP_06648162.1| arginine ABC transporter [Escherichia coli FVEC1412] gi|293409238|ref|ZP_06652814.1| arginine ABC transporter [Escherichia coli B354] gi|298379951|ref|ZP_06989556.1| arginine ABC transporter [Escherichia coli FVEC1302] gi|300901230|ref|ZP_07119331.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 198-1] gi|300935046|ref|ZP_07150078.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 21-1] gi|300991843|ref|ZP_07179668.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 200-1] gi|300993467|ref|ZP_07180409.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 45-1] gi|301020603|ref|ZP_07184680.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 69-1] gi|301051209|ref|ZP_07198038.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 185-1] gi|312969070|ref|ZP_07783277.1| arginine-binding periplasmic protein 1 [Escherichia coli 2362-75] gi|331646131|ref|ZP_08347234.1| arginine-binding periplasmic protein 1 [Escherichia coli M605] gi|331651881|ref|ZP_08352900.1| arginine-binding periplasmic protein 1 [Escherichia coli M718] gi|331656936|ref|ZP_08357898.1| arginine-binding periplasmic protein 1 [Escherichia coli TA206] gi|331662275|ref|ZP_08363198.1| arginine-binding periplasmic protein 1 [Escherichia coli TA143] gi|331682372|ref|ZP_08382991.1| arginine-binding periplasmic protein 1 [Escherichia coli H299] gi|26107286|gb|AAN79469.1|AE016758_73 Arginine-binding periplasmic protein 1 precursor [Escherichia coli CFT073] gi|91071471|gb|ABE06352.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli UTI89] gi|110342656|gb|ABG68893.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli 536] gi|110614408|gb|ABF03075.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 5 str. 8401] gi|115512167|gb|ABJ00242.1| arginine transporter subunit [Escherichia coli APEC O1] gi|190907594|gb|EDV67189.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli F11] gi|192957333|gb|EDV87781.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli E110019] gi|194418578|gb|EDX34665.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Shigella dysenteriae 1012] gi|215264066|emb|CAS08408.1| arginine transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|218364536|emb|CAR02218.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|218369225|emb|CAR16980.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI39] gi|218426209|emb|CAR07033.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli ED1a] gi|218431387|emb|CAR12265.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli UMN026] gi|226898383|gb|EEH84642.1| arginine-binding periplasmic protein 1 [Escherichia sp. 3_2_53FAA] gi|227838925|gb|EEJ49391.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli 83972] gi|284920716|emb|CBG33779.1| arginine ABC transporter, substrate-binding protein [Escherichia coli 042] gi|291428754|gb|EFF01779.1| arginine ABC transporter [Escherichia coli FVEC1412] gi|291469706|gb|EFF12190.1| arginine ABC transporter [Escherichia coli B354] gi|294494173|gb|ADE92929.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli IHE3034] gi|298279649|gb|EFI21157.1| arginine ABC transporter [Escherichia coli FVEC1302] gi|300297116|gb|EFJ53501.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 185-1] gi|300305453|gb|EFJ59973.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 200-1] gi|300355304|gb|EFJ71174.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 198-1] gi|300398621|gb|EFJ82159.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 69-1] gi|300406581|gb|EFJ90119.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 45-1] gi|300459709|gb|EFK23202.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 21-1] gi|307552706|gb|ADN45481.1| arginine-binding periplasmic protein 1 precursor [Escherichia coli ABU 83972] gi|312286472|gb|EFR14385.1| arginine-binding periplasmic protein 1 [Escherichia coli 2362-75] gi|315287305|gb|EFU46716.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 110-3] gi|315292538|gb|EFU51890.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 153-1] gi|315299388|gb|EFU58640.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 16-3] gi|320177803|gb|EFW52789.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Shigella boydii ATCC 9905] gi|320196642|gb|EFW71265.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli WV_060327] gi|323190685|gb|EFZ75954.1| arginine-binding periplasmic protein 1 [Escherichia coli RN587/1] gi|323953433|gb|EGB49299.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H252] gi|323958152|gb|EGB53861.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H263] gi|324009771|gb|EGB78990.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 57-2] gi|324013025|gb|EGB82244.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 60-1] gi|330910643|gb|EGH39153.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli AA86] gi|331044883|gb|EGI17010.1| arginine-binding periplasmic protein 1 [Escherichia coli M605] gi|331050159|gb|EGI22217.1| arginine-binding periplasmic protein 1 [Escherichia coli M718] gi|331055184|gb|EGI27193.1| arginine-binding periplasmic protein 1 [Escherichia coli TA206] gi|331060697|gb|EGI32661.1| arginine-binding periplasmic protein 1 [Escherichia coli TA143] gi|331080003|gb|EGI51182.1| arginine-binding periplasmic protein 1 [Escherichia coli H299] gi|332088878|gb|EGI93990.1| arginine-binding periplasmic protein 1 [Shigella boydii 5216-82] gi|332091087|gb|EGI96177.1| arginine-binding periplasmic protein 1 [Shigella dysenteriae 155-74] Length = 243 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 86/249 (34%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + F Sbjct: 48 VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D+ GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTH 245 ++ Sbjct: 216 LQQKLNTAL 224 >gi|16128831|ref|NP_415384.1| arginine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|74311407|ref|YP_309826.1| arginine 3rd transport system periplasmic binding protein [Shigella sonnei Ss046] gi|82543351|ref|YP_407298.1| arginine 3rd transport system periplasmic binding protein [Shigella boydii Sb227] gi|89107714|ref|AP_001494.1| arginine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|157156637|ref|YP_001462061.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli E24377A] gi|157160386|ref|YP_001457704.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli HS] gi|170080522|ref|YP_001729842.1| arginine ABC transporter periplasmic-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|187732757|ref|YP_001880940.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Shigella boydii CDC 3083-94] gi|188494716|ref|ZP_03001986.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli 53638] gi|191166170|ref|ZP_03028004.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli B7A] gi|193064432|ref|ZP_03045513.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli E22] gi|194438380|ref|ZP_03070470.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli 101-1] gi|209918112|ref|YP_002292196.1| arginine ABC transporter substrate binding component [Escherichia coli SE11] gi|218553449|ref|YP_002386362.1| arginine ABC transporter periplasmic-binding protein [Escherichia coli IAI1] gi|218694337|ref|YP_002402004.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|238900122|ref|YP_002925918.1| arginine transporter subunit [Escherichia coli BW2952] gi|253774107|ref|YP_003036938.1| cationic amino acid ABC transporter periplasmic binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160978|ref|YP_003044086.1| arginine transporter subunit [Escherichia coli B str. REL606] gi|256021016|ref|ZP_05434881.1| arginine transporter subunit [Shigella sp. D9] gi|256023510|ref|ZP_05437375.1| arginine transporter subunit [Escherichia sp. 4_1_40B] gi|260843114|ref|YP_003220892.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli O103:H2 str. 12009] gi|260854155|ref|YP_003228046.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli O26:H11 str. 11368] gi|260867036|ref|YP_003233438.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli O111:H- str. 11128] gi|293414144|ref|ZP_06656793.1| arginine transport system substrate-binding protein [Escherichia coli B185] gi|293433161|ref|ZP_06661589.1| arginine-binding periplasmic protein 1 [Escherichia coli B088] gi|297516292|ref|ZP_06934678.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli OP50] gi|300817037|ref|ZP_07097256.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 107-1] gi|300824004|ref|ZP_07104126.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 119-7] gi|300902396|ref|ZP_07120379.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 84-1] gi|300921106|ref|ZP_07137490.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 115-1] gi|300924472|ref|ZP_07140442.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 182-1] gi|300929327|ref|ZP_07144801.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 187-1] gi|300947046|ref|ZP_07161268.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 116-1] gi|300957067|ref|ZP_07169312.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 175-1] gi|301027623|ref|ZP_07190944.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 196-1] gi|301305365|ref|ZP_07211460.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 124-1] gi|301325871|ref|ZP_07219304.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 78-1] gi|301646303|ref|ZP_07246193.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 146-1] gi|307137491|ref|ZP_07496847.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli H736] gi|307311749|ref|ZP_07591389.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli W] gi|309795342|ref|ZP_07689760.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 145-7] gi|331641384|ref|ZP_08342519.1| arginine-binding periplasmic protein 1 [Escherichia coli H736] gi|331667237|ref|ZP_08368102.1| arginine-binding periplasmic protein 1 [Escherichia coli TA271] gi|331676651|ref|ZP_08377347.1| arginine-binding periplasmic protein 1 [Escherichia coli H591] gi|2507362|sp|P30859|ARTI_ECOLI RecName: Full=Putative ABC transporter arginine-binding protein 2; Flags: Precursor gi|1651396|dbj|BAA35577.1| arginine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|1787088|gb|AAC73950.1| arginine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|73854884|gb|AAZ87591.1| arginine 3rd transport system periplasmic binding protein [Shigella sonnei Ss046] gi|81244762|gb|ABB65470.1| arginine 3rd transport system periplasmic binding protein [Shigella boydii Sb227] gi|157066066|gb|ABV05321.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli HS] gi|157078667|gb|ABV18375.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli E24377A] gi|169888357|gb|ACB02064.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|187429749|gb|ACD09023.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Shigella boydii CDC 3083-94] gi|188489915|gb|EDU65018.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli 53638] gi|190903779|gb|EDV63494.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli B7A] gi|192928894|gb|EDV82507.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli E22] gi|194422604|gb|EDX38601.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli 101-1] gi|209911371|dbj|BAG76445.1| arginine ABC transporter substrate binding component [Escherichia coli SE11] gi|218351069|emb|CAU96773.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|218360217|emb|CAQ97767.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI1] gi|238860009|gb|ACR62007.1| arginine transporter subunit [Escherichia coli BW2952] gi|242376679|emb|CAQ31391.1| artI, subunit of arginine ABC transporter [Escherichia coli BL21(DE3)] gi|253325151|gb|ACT29753.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972879|gb|ACT38550.1| arginine transporter subunit [Escherichia coli B str. REL606] gi|253977093|gb|ACT42763.1| arginine transporter subunit [Escherichia coli BL21(DE3)] gi|257752804|dbj|BAI24306.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli O26:H11 str. 11368] gi|257758261|dbj|BAI29758.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli O103:H2 str. 12009] gi|257763392|dbj|BAI34887.1| arginine 3rd transport system periplasmic binding protein ArtI [Escherichia coli O111:H- str. 11128] gi|260449990|gb|ACX40412.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli DH1] gi|291323980|gb|EFE63402.1| arginine-binding periplasmic protein 1 [Escherichia coli B088] gi|291434202|gb|EFF07175.1| arginine transport system substrate-binding protein [Escherichia coli B185] gi|299879259|gb|EFI87470.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 196-1] gi|300316152|gb|EFJ65936.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 175-1] gi|300405543|gb|EFJ89081.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 84-1] gi|300411957|gb|EFJ95267.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 115-1] gi|300419357|gb|EFK02668.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 182-1] gi|300453329|gb|EFK16949.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 116-1] gi|300462746|gb|EFK26239.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 187-1] gi|300523515|gb|EFK44584.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 119-7] gi|300530389|gb|EFK51451.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 107-1] gi|300839383|gb|EFK67143.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 124-1] gi|300847385|gb|EFK75145.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 78-1] gi|301075460|gb|EFK90266.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 146-1] gi|306908304|gb|EFN38803.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli W] gi|308120992|gb|EFO58254.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 145-7] gi|309701141|emb|CBJ00439.1| arginine ABC transporter, substrate-binding protein [Escherichia coli ETEC H10407] gi|315060148|gb|ADT74475.1| arginine transporter subunit [Escherichia coli W] gi|315135512|dbj|BAJ42671.1| arginine transporter subunit [Escherichia coli DH1] gi|315257899|gb|EFU37867.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 85-1] gi|315619870|gb|EFV00389.1| arginine-binding periplasmic protein 1 [Escherichia coli 3431] gi|320175303|gb|EFW50409.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Shigella dysenteriae CDC 74-1112] gi|323155763|gb|EFZ41932.1| arginine-binding periplasmic protein 1 [Escherichia coli EPECa14] gi|323159685|gb|EFZ45664.1| arginine-binding periplasmic protein 1 [Escherichia coli E128010] gi|323165796|gb|EFZ51582.1| arginine-binding periplasmic protein 1 [Shigella sonnei 53G] gi|323172170|gb|EFZ57808.1| arginine-binding periplasmic protein 1 [Escherichia coli LT-68] gi|323175515|gb|EFZ61110.1| arginine-binding periplasmic protein 1 [Escherichia coli 1180] gi|323185173|gb|EFZ70538.1| arginine-binding periplasmic protein 1 [Escherichia coli 1357] gi|323379294|gb|ADX51562.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli KO11] gi|323942780|gb|EGB38945.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E482] gi|323947113|gb|EGB43124.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H120] gi|323962976|gb|EGB58548.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H489] gi|324015939|gb|EGB85158.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Escherichia coli MS 117-3] gi|324116077|gb|EGC10001.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1167] gi|331038182|gb|EGI10402.1| arginine-binding periplasmic protein 1 [Escherichia coli H736] gi|331065593|gb|EGI37486.1| arginine-binding periplasmic protein 1 [Escherichia coli TA271] gi|331075340|gb|EGI46638.1| arginine-binding periplasmic protein 1 [Escherichia coli H591] gi|332097032|gb|EGJ02015.1| arginine-binding periplasmic protein 1 [Shigella boydii 3594-74] gi|332104595|gb|EGJ07941.1| arginine transporter subunit [Shigella sp. D9] Length = 243 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 85/249 (34%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + F Sbjct: 48 VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTH 245 ++ Sbjct: 216 LQQKLNTAL 224 >gi|323339298|ref|ZP_08079588.1| glutamate ABC superfamily ATP binding cassette transporter substrate-binding protein [Lactobacillus ruminis ATCC 25644] gi|323093282|gb|EFZ35864.1| glutamate ABC superfamily ATP binding cassette transporter substrate-binding protein [Lactobacillus ruminis ATCC 25644] Length = 276 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 37/260 (14%), Positives = 81/260 (31%), Gaps = 24/260 (9%) Query: 1 MYKDFF------VSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEV-- 50 M K+ ++ +C + L +S + ++K L G + F Sbjct: 1 MKKNMIKKFTFGIASVCALGLILCGCGKKSSDNSVQEVKDNKTLTIGTSADFAPFEFPIV 60 Query: 51 -KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 + G+D+ + ++ + ++ + L++ ++D++ T Sbjct: 61 KNGKKEITGYDIMIAQKVADKLGVK---LKIVNTEFPSLISELKNDKVDLVLSGMTKTAK 117 Query: 110 REISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 RE + F Y ++ KK + +S G I Q TT E + K Sbjct: 118 REKV--VDFSKPYYTVENVMLVQKKDADKYNKISDTKGKQIGAQQSTTQEDIIKKQMKGA 175 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK--SP 225 N+ + E + + D + + N + K Sbjct: 176 NLVTESVTTSLATE----LKNGKIDGLVLENAIANNYVKQNPGKYAIAKVKLTTGKDIES 231 Query: 226 LAPAIIQGDTEWYNIVSWTH 245 + A +GD + +V+ Sbjct: 232 YSVAAKKGDKKLIKVVNKVI 251 >gi|163938763|ref|YP_001643647.1| extracellular solute-binding protein [Bacillus weihenstephanensis KBAB4] gi|229010278|ref|ZP_04167487.1| Extracellular solute-binding protein family 3 [Bacillus mycoides DSM 2048] gi|229165790|ref|ZP_04293558.1| Extracellular solute-binding protein family 3 [Bacillus cereus AH621] gi|163860960|gb|ABY42019.1| extracellular solute-binding protein family 3 [Bacillus weihenstephanensis KBAB4] gi|228617791|gb|EEK74848.1| Extracellular solute-binding protein family 3 [Bacillus cereus AH621] gi|228750973|gb|EEM00790.1| Extracellular solute-binding protein family 3 [Bacillus mycoides DSM 2048] Length = 265 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + N L IK+ G L G F Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTANQDALQKIKQSGELVIGTEGTYPPFTFHDT 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 N GFDV+ ++ + P + + +K+ D+++ + Sbjct: 61 NDKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGIDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSSPYISSSAALVVAKDKDKPATFADVKGLK-AAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 E + + R D +T + L + ++ I+ S Sbjct: 170 EITGVEGFSQAAELLSSGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G + V+ Sbjct: 229 KGSDKLVQEVNKAL 242 >gi|323937970|gb|EGB34232.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1520] Length = 243 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 85/249 (34%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + F Sbjct: 48 VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWL--KDNPKLAALGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTH 245 ++ Sbjct: 216 LQQKLNTAL 224 >gi|187932424|ref|YP_001887466.1| amino acid ABC transporter [Clostridium botulinum B str. Eklund 17B] gi|187720577|gb|ACD21798.1| amino acid ABC transporter [Clostridium botulinum B str. Eklund 17B] Length = 278 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 96/263 (36%), Gaps = 29/263 (11%) Query: 2 YKDFFVSILCLIILFFTSFSTN------------ASILGDIKKRGFLKCGINTGLVGFAE 49 K V + + + + N AS+L IK++G L G + + Sbjct: 7 KKLGLVVAIGAMAISIVGCAGNKNTAGSKDGKETASVLEAIKQKGKLVVGTSADYPPYEF 66 Query: 50 ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 V GFD+ ++L+ + + +Q ++ +ALQ+ ++D++ Sbjct: 67 HKEVDGKDQIVGFDISIAKSLAEDLGVE---LQINDMDFDGLLIALQAGKVDMVFAGMTP 123 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ F I Y G I+ K + I S+ L I VQ G+ E + Sbjct: 124 TDERKE--NADFSDIYYTAQHGVIVRKGEEGKIKSIDDLKDKKIGVQKGSIQERLANEKI 181 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISK 223 K +V ++ + ++ DA ++ N +VIL D Sbjct: 182 PDAQKK----ALGKVTDLVLDLKNNKVDAILVELPVAEFNCEKNSDIALTNVILEDSEGG 237 Query: 224 SPLAPAIIQGDTEWYNIVSWTHY 246 S A A+ +G + + ++ T Sbjct: 238 S--AIAMSKGSDDLKSEINKTIQ 258 >gi|104779494|ref|YP_605992.1| cystine transporter subunit [Pseudomonas entomophila L48] gi|95108481|emb|CAK13175.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas entomophila L48] Length = 264 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 73/227 (32%), Gaps = 12/227 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + L I+++G + G+ F+ NG GF+V+ L+ + + Sbjct: 25 AFAGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKLAGFEVELSELLAKELGVKA---KV 81 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGIS 138 P AL+SK++D++ + R+ + + K + I Sbjct: 82 QPTKWDGILAALESKRLDVVINQVTISEERKKKYDFSEPYTISGIQALILKKKAEQLNIK 141 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G + V GT E + +E A R R DA D Sbjct: 142 TAQDLAGKKVGVGLGTNYEQWVKQDVPKA----EVRTYEDDPTKFADLRNGRIDAILIDR 197 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A + + S+ A+ +G+ E ++ Sbjct: 198 LAALEYAQKAK---DTELAGAPFSRLESGVALRKGEPELLEALNKAI 241 >gi|328544436|ref|YP_004304545.1| ABC transporter, substrate binding protein (Amino acid) [Polymorphum gilvum SL003B-26A1] gi|326414178|gb|ADZ71241.1| ABC transporter, substrate binding protein (Amino acid) [Polymorphum gilvum SL003B-26A1] Length = 257 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 80/233 (34%), Gaps = 15/233 (6%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 K ++ G F + ++G GFD+D +AL + + +++ + Sbjct: 20 QAKDWSKVRIGTEGAYPPFNNLTSDGQLVGFDIDIAKALCEEMKVE---CEFITQDWDGI 76 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGA 146 ALQ+ + D + + T R+ + F Y + K I ++ + L G Sbjct: 77 IPALQAGKFDAIIASMSITDERKQM--VDFTNKYYNTPPAIAVPKDSPIAGTTDADLKGK 134 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 I Q+ TT ++Y + ++ +E R DA D+ L Sbjct: 135 VIGAQSATTH----SNYAEEKLTSAQIKLYPTADEYKLDVANGRIDAVIDDVVVLSDWLA 190 Query: 207 TNDRPSEH----VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 T D + +I+ AI + D + + A+ + + Sbjct: 191 TADGACCKLLGTLKPDPVINGEGAGIAIRKEDQNLKEMFNTAITAIRASGKYK 243 >gi|331672402|ref|ZP_08373193.1| arginine-binding periplasmic protein 1 [Escherichia coli TA280] gi|331070597|gb|EGI41961.1| arginine-binding periplasmic protein 1 [Escherichia coli TA280] Length = 243 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 86/249 (34%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + F Sbjct: 48 VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D+ GD + + D P + + K L A+ QG++E Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNSE 215 Query: 237 WYNIVSWTH 245 ++ Sbjct: 216 LQQKLNTAL 224 >gi|293374468|ref|ZP_06620790.1| bacterial extracellular solute-binding protein, family 3 [Turicibacter sanguinis PC909] gi|325841138|ref|ZP_08167263.1| putative arginine ABC transporter, periplasmic arginine-binding protein ArtP [Turicibacter sp. HGF1] gi|292646847|gb|EFF64835.1| bacterial extracellular solute-binding protein, family 3 [Turicibacter sanguinis PC909] gi|325489995|gb|EGC92341.1| putative arginine ABC transporter, periplasmic arginine-binding protein ArtP [Turicibacter sp. HGF1] Length = 257 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 84/250 (33%), Gaps = 20/250 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFA---EVKANGDWK 57 M K + IL L+++ S N + I+K G L G++ F + Sbjct: 1 MKK--MLMILGLMLVGVVGCSQNGVSVESIEKNGSLLVGLSADYPPFESVKMIDGKETLV 58 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDV +++ + +++ ++ ALQ+ Q+D++ R+ + Sbjct: 59 GFDVMLAEEIANELGVK---VEFKQMDFSGLVGALQASQVDMVISGMSPDEERQK--QVD 113 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + Y ++ + I S L G I Q G+ A+ + + Sbjct: 114 FSDLYYTGENAVLIRTESVDSIKSEDDLKGIKIGTQLGSVQSPI------AYELTENVKE 167 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + I DA + + + S+ +A A+ +G T Sbjct: 168 LATTQAIVLELSNGNLDAVIVGKEIANRYAEQFENVEVADL--KVSSEEYMAVAMPKGST 225 Query: 236 EWYNIVSWTH 245 + V+ Sbjct: 226 DLVEKVNEVI 235 >gi|221197101|ref|ZP_03570148.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia multivorans CGD2M] gi|221203773|ref|ZP_03576791.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia multivorans CGD2] gi|221175939|gb|EEE08368.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia multivorans CGD2] gi|221183655|gb|EEE16055.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia multivorans CGD2M] Length = 260 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 92/255 (36%), Gaps = 21/255 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ + + +L ++ A K ++ G + F +G GFD Sbjct: 1 MKR--LIAAVSIALLAASAGPAVA------KDWTTIRFGTDASYAPFESKAPDGKLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + +K +L N AL++K+ D + + T R +G F Sbjct: 53 IDLGNEICARL---KAKCVWLENNFDGMIPALKAKKFDAVLSSMSITPQRAQQIG--FTT 107 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y ++ K + + L G SI V+ GTT E Y+ + + ++ Sbjct: 108 KIYNQPTRLVVKKGSPLLPTAESLKGKSIGVEQGTTQEAYAKAYWAKQG--ANVVSYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + A A R DA D L + R + + + + + + + D Sbjct: 166 DGVYADLTAGRLDAALQDEVQAAIGFLKSPRGAGYQFVGPELVDEKVLGIGAGIGLRKED 225 Query: 235 TEWYNIVSWTHYAMV 249 T+ + MV Sbjct: 226 TDLKAKIDRAILDMV 240 >gi|325528847|gb|EGD05895.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. TJI49] Length = 266 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 73/227 (32%), Gaps = 13/227 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S A +L +K+ G LK + F A+G +GFDVD +A+++ + P Q+ Sbjct: 24 SHAADLLDTVKQAGVLKIALEGTYPPFDYRNADGQLEGFDVDVAKAVAARLGVKP---QF 80 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GIS 138 + LQ+ + D++ T R L F + + + Sbjct: 81 VTTEWSGILAGLQAGKFDVIVNQVAITPSR--RQALDFSQPYVYSSAQLLQRQNDARAFR 138 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S+ +L G + V G+ + V+ E A R DA D Sbjct: 139 SLDELKGKKVGVTMGSNYVDLVKRVPA-----IDLQVYPGTPENLRDLAAGRIDAAVNDR 193 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + N + +G+ ++ + Sbjct: 194 -LMLNYLIKNSHLPLRPGSVLADGADEMGIPFRKGNPKFAKALDDAI 239 >gi|241205008|ref|YP_002976104.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858898|gb|ACS56565.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 257 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 89/261 (34%), Gaps = 23/261 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + F + + + LF S + G ++ F V A+G +GFD+D Sbjct: 6 RIFAAASIAAMSLFAGSAMADGE---------KYVIGTDSTYPPFEFVDASGTIQGFDID 56 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +AL + + ++ ++ + AL +K+ D++ + T R + F Sbjct: 57 ITKALCAEM---KAECTFVSTDWDGIIPALNAKKFDMIVSSMSITPERLKL--VDFSNKY 111 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y + K IS V+ L G I Q TT + ++ +E Sbjct: 112 YNTPPAIAVPKDSTISDVAGLKGKVIGAQTSTTHANYAEKHLA----DTELKLYPTADEY 167 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWY 238 + R DA D+ L ++ ++ + K AI QGD Sbjct: 168 KLDVASGRVDAVIDDVVVLSEWVKSDAGACCKILTTLPVDKEINGNGAGIAIRQGDP-LR 226 Query: 239 NIVSWTHYAMVTAEELGITQK 259 ++ A+ + E Q Sbjct: 227 EKLNTAIAAIRASGEYKKIQD 247 >gi|320547044|ref|ZP_08041343.1| polar amino acid uptake ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] gi|320448329|gb|EFW89073.1| polar amino acid uptake ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] Length = 291 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 90/280 (32%), Gaps = 19/280 (6%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAE---VKA 52 M K F +L T+ +N + + DIK +G + +N F V Sbjct: 20 MKLSKVFGGLVLVASTCLLTACGSNDKKDTSVSDIKDKGTMVVALNPEFAPFEFKTLVDG 79 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G DV A+ + +++ ++ +LQS + DI T R+ Sbjct: 80 KDTIVGADVKIAEAIGEELGVK---VKFSSMSFNNVLASLQSGKADIAISGISATPERKK 136 Query: 113 SLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 F Y ++ K + + L G S+ Q GT E ++ K Sbjct: 137 --AYNFSEPYYESENVVLIKKTDLDKYTKTTSLDGLSVGTQKGTIQETVASEQLK----G 190 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + E+ + + A + ND + I A A+ Sbjct: 191 AKVVALTQNGEMINELKNGQIQAVVLEKPIAEGYVANNDDLTISNITLKNDDADAYAVAL 250 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + D + V+ + + ++ ++ +S +N Sbjct: 251 PKDDDKLTKKVNKVINDLKDSGKIDQFVQDAYALSTSDSN 290 >gi|319794875|ref|YP_004156515.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315597338|gb|ADU38404.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 266 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 88/247 (35%), Gaps = 10/247 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + ++ + +L + + L ++ K +K + T + V N +G DV Sbjct: 7 KRHLALAFASVALLATAGGAHAQNALDNVLKAKTIKIAVPTDYPPYGSVDKNMKPQGLDV 66 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + +++ + I+ +P+ + R LQ+++ D++ RE + F Sbjct: 67 EMAELIATKLGVK---IELVPVTSANRIPYLQTRKADLVISTLGKNPEREKV--IEFSSA 121 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Q K +++ S ++G ++ V G + L A+ FE Sbjct: 122 YAPFFQAVYAAKSMKLTAFSDMAGKTVAVTRGAMEDQELNKVAPAN---VDYRRFEDNNA 178 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AA+ A + SA A + P ++ SP + +G+T V Sbjct: 179 TIAAFVAGQTQTLAT--SAAVAGDMLAKNPKVSAEFKLLLKDSPCFVGVAKGETALKTKV 236 Query: 242 SWTHYAM 248 + A Sbjct: 237 NEIIAAA 243 >gi|281491029|ref|YP_003353009.1| glutamate or arginine ABC transporter substrate binding protein [Lactococcus lactis subsp. lactis KF147] gi|281374787|gb|ADA64307.1| Glutamate or arginine ABC transporter, substrate binding protein [Lactococcus lactis subsp. lactis KF147] Length = 269 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 80/272 (29%), Gaps = 25/272 (9%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 M K + + + + + + +KK G LK ++ F Sbjct: 1 MKKLALGMVGLAAVATLAACGNGKSATNQVDKVKKAGVLKVALSPDYPPFEFQIIKDGKN 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G DVD A+ + ++ ++ +L + + DI RE Sbjct: 61 TIVGSDVDLANAIGKKLGVK---VKIESMDFNNVLASLNTGKADIAISGISKEPSREK-- 115 Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F + Y ++ K SV G + Q G+T E + FK Sbjct: 116 SVNFSDVYYTASNYLVVKKSDLSKYRSVDDFKGKKVAAQKGSTQEGIVTSQFK----GAT 171 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA--PAI 230 I ++ + + + + + N + K A+ Sbjct: 172 EIALPQIGDEINEVKGGQVQGAVIENLIAKSYVAANSD-LAIANVDVKTPKDSYGSAVAL 230 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 +G E +V+ EEL Q N + Sbjct: 231 PKGSDELTKVVNSVIK-----EELKNGQINKD 257 >gi|229189060|ref|ZP_04316088.1| Extracellular solute-binding protein family 3 [Bacillus cereus ATCC 10876] gi|228594480|gb|EEK52271.1| Extracellular solute-binding protein family 3 [Bacillus cereus ATCC 10876] Length = 265 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELSEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 I E + + R D D ++ T ++ + + Sbjct: 170 EIIGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G T+ V Sbjct: 229 KGSTKLVQEVDKAL 242 >gi|330807010|ref|YP_004351472.1| Putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375118|gb|AEA66468.1| Putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 251 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 82/250 (32%), Gaps = 20/250 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 YK F ++ ++ ++ + + LK GI F A+G GFD Sbjct: 4 YKKFLLAAAASLVFSASAMAAD-----------KLKMGIEAAYPPFNNKDASGQVVGFDK 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D AL + + + + + + AL +++ D L + R+ + F Sbjct: 53 DIGDALCAKMKVE---CEVVTSDWDGIIPALLAQKFDFLISSLSVNDERK--QAVDFTDP 107 Query: 122 TYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K L G I Q T L D +++ E Sbjct: 108 YYSNKLQFIAPKNVDFKVDKESLKGKVIGAQRSTLAGTWLED---ELGSDITAKLYDTQE 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + R DA D Y T + ++ +A A+ +G+ E N Sbjct: 165 NAYLDLTSGRVDAILADKYVNYDWLKTEAGRAYEFKGDPVVEGDKIAIAVRKGNDELRNK 224 Query: 241 VSWTHYAMVT 250 ++ ++ Sbjct: 225 LNAALKEIIA 234 >gi|322832079|ref|YP_004212106.1| cationic amino acid ABC transporter periplasmic binding protein [Rahnella sp. Y9602] gi|321167280|gb|ADW72979.1| cationic amino acid ABC transporter, periplasmic binding protein [Rahnella sp. Y9602] Length = 247 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 82/234 (35%), Gaps = 20/234 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFD+D Sbjct: 2 KSLLKVSLAALTLAFAVSSHAAD--------KKLIVATDTAFVPFEFKQGD-KYVGFDID 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + + P++ ALQ+ ID+ T R+ + F Sbjct: 53 LWDAVAKEM---KVSYELKPMDFGGIIPALQTHNIDLALAGITITPERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ I SV+ L G ++ V++GT++ DY KA+ F ++ Sbjct: 108 YNSGLMVMVKSNNDAIKSVADLKGKTVAVKSGTSSV----DYMKANVQTKDLRQFPNIDS 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 R DA D + T + + + D ++ A QG Sbjct: 164 AYMELGTGRADAVMHDTPNILYFIKTAGKG-QFKAVGDSLAGQQYGIAFPQGSD 216 >gi|295697368|ref|YP_003590606.1| extracellular solute-binding protein family 3 [Bacillus tusciae DSM 2912] gi|295412970|gb|ADG07462.1| extracellular solute-binding protein family 3 [Bacillus tusciae DSM 2912] Length = 275 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 68/212 (32%), Gaps = 8/212 (3%) Query: 35 FLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G + F V +GFD+D A++ A ++++ K F AL Sbjct: 47 VYVVGTDAAYAPFESVNPQTNQIEGFDIDLLNAVAKAAG---FQVKFENTPWKGIFQALS 103 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 Q DIL T R+ + F + Q ++ I ++ L G + VQ G Sbjct: 104 IGQRDILISAITITDERK--QSMDFSNPYFQAQQMIVVPPGSPIRTLQDLKGKKVGVQTG 161 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT + + D+ + ++ + DA D + N Sbjct: 162 TTGDEIVTDFLGK--TDPNIKRYDTTPLALEDLKNKGVDAVVADNGVVLDYIRQNSSKGF 219 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 K A+ +G+T ++ Sbjct: 220 EHYTDPKFPKEYYGIAVKKGNTALLEKINDGL 251 >gi|206576073|ref|YP_002239486.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Klebsiella pneumoniae 342] gi|206565131|gb|ACI06907.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Klebsiella pneumoniae 342] Length = 243 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 83/249 (33%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + L ++ ++ F V AN GFD Sbjct: 1 MKKVLIAALLAGMSLSASAAQ-------------TIRFATEASYPPFELVDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + L+ ++ D + D T RE + F Sbjct: 48 VDLANALCKEI---DATCTFTNQAFDSLIPGLKFRRFDAVMAGMDITPEREK--QVLFST 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +S+ QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFVGQQG-KFTSIDQLKGKKVGVQNGTTHQKFITDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R DA GD + + P + + K+ L A+ QG+T+ Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWL--KSNPKLAAVGDKVTDKAYFGTGLGIAVRQGNTD 215 Query: 237 WYNIVSWTH 245 + Sbjct: 216 LQQKFNAAL 224 >gi|319795334|ref|YP_004156974.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315597797|gb|ADU38863.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 275 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 52/237 (21%), Positives = 90/237 (37%), Gaps = 11/237 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSK 77 +A L DIKK+G L G+ V G++VD A++ I P Sbjct: 18 GTVAHADQLADIKKKGELVVGVLGTDEPATFVDPKTRQIVGYEVDLVNAIAKKIGVKP-- 75 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + R LQ +D+++ RE + F T+ GQ I+ K GI Sbjct: 76 -VLKQIAVAARIPELQQGHVDLVAAGLTHNKEREA--QIDFSLTTFVTGQKAIVKKDSGI 132 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + QL G + G T E + + + F+ ++ A + + Y D Sbjct: 133 ADIPQLGGKKVLTIRGGTQEPNI----RKAVPTAEVVTFDTSQQAFQALQQGKGVGYVDD 188 Query: 198 ISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 +AL +++V+L +S LA I +G++ +V T + + E Sbjct: 189 EAALLRSYAKLGPAKAQYVVLKQNLSTEALAIGIKKGESGLKAVVDDTLRELEKSGE 245 >gi|306844082|ref|ZP_07476676.1| extracellular solute-binding protein [Brucella sp. BO1] gi|306275525|gb|EFM57257.1| extracellular solute-binding protein [Brucella sp. BO1] Length = 262 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G F + +G GFDVD RAL + ++ ++ ALQ+ Sbjct: 29 KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 85 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152 + D + T R+ + F Y G K I + L+G +I VQ Sbjct: 86 GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 143 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT F + EE R DA D L T D Sbjct: 144 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 199 Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + D I + A +G E + A+ Sbjct: 200 CKMVGTYPPDDAIHGVGIGVAFKKGRPELVEKFNAAIKAI 239 >gi|218234702|ref|YP_002365641.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus B4264] gi|218162659|gb|ACK62651.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus B4264] Length = 265 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGEFVIGTEGTYPPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELAEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSKPYISSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 I E + + R D +T + L + ++ I+ S Sbjct: 170 EIIGVEGFSQAAELLASGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G + V Sbjct: 229 KGSDKLVQEVDKAL 242 >gi|138897014|ref|YP_001127467.1| glutamine transport system substrate-binding protein [Geobacillus thermodenitrificans NG80-2] gi|134268527|gb|ABO68722.1| Glutamine transport system substrate-binding protein [Geobacillus thermodenitrificans NG80-2] Length = 273 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 77/254 (30%), Gaps = 15/254 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDI---KKRG-FLKCGINTGLVGFAEVKANGDWK 57 K F V+++ + + + + K+ + G + F + G Sbjct: 5 KKGFIVAVVAALFMALAACGKSTETTSSSGSEKETKQKITVGTDAAFAPFEYM-EKGKVV 63 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD D A+ D + F +LQSK+ID+ T R+ Sbjct: 64 GFDADLLDAVMKEAGLDYE---LKNIGWDPLFASLQSKEIDMGISGITITDKRK--QSYD 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + Q ++ + + + L G +I VQ TT + F H FE Sbjct: 119 FSAPYFEATQVILVKEGSLVKNALDLKGKTIGVQNATTGQEAAEKLF---GKGEHIKKFE 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTE 236 DA D + N VI PD + + D++ Sbjct: 176 TSVVAIMEMLNGGVDAVITDNAVANEYVKNNPDKKLQVIEDPDNFTSEYYGIIFPK-DSD 234 Query: 237 WYNIVSWTHYAMVT 250 V ++ Sbjct: 235 LKAKVDEALKNIIE 248 >gi|299536404|ref|ZP_07049716.1| histidine-binding protein precursor (Hbp) [Lysinibacillus fusiformis ZC1] gi|298727888|gb|EFI68451.1| histidine-binding protein precursor (Hbp) [Lysinibacillus fusiformis ZC1] Length = 258 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 80/249 (32%), Gaps = 10/249 (4%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWK 57 M ++ ++I+ L + + + K G + G+ Sbjct: 1 MKRNLMVLLTIMAAFTLVLAGCGSKDNTSSGDGDSKKVYKVGTEATFAPIVSLDDKGNIV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DVD +A++ + ++++ + + F +++ + DI T R+ + Sbjct: 61 GIDVDVLQAIADEM---DFEVKWESIGWEPVFQTIKNGETDIGGAGITITDERKET--FD 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y ++ + I S+ +L I VQ T + + FE Sbjct: 116 FTEPYYESQLLIVVKEDSKIQSLDELKDKKISVQINATGHMAAKKLQGE--SSPNIFAFE 173 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 +A GD S +Y + VI D K + +G+ E Sbjct: 174 NQPIAIQEMLNGNVEAAIGDNSVVYEYIKAHPNDKIKVIKDDSFEKEYYGFMVQKGNKEL 233 Query: 238 YNIVSWTHY 246 + ++ Sbjct: 234 LDKLNEGLK 242 >gi|325684593|gb|EGD26752.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 279 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 35/236 (14%), Positives = 78/236 (33%), Gaps = 16/236 (6%) Query: 18 TSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 ++ + + + +K + G+ F +GF++D R L+ I Sbjct: 24 SACAVESDNSVRVYNHVKSSKTITWGVKFDTALFGIKSVKTNKLEGFEIDLARLLTKEIL 83 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 K +++ + ++ + L++ +D + T R+ + F + G + Sbjct: 84 GKDGKAKFIEVTSQTKIPQLKNNNLDAVLATMTITDERKK--SVDFSTPYFKAGTSLMTK 141 Query: 133 KKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 I S+ L+ G V GTT +A + A A + Sbjct: 142 TSSPIKSIKDLNHKGRVAIVVKGTTAADDIARLAPKAK----IRQYNDYGACTNALLAGQ 197 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 DA D L + + ++ ++ P A+ +G T+ ++ Sbjct: 198 GDAVATDNGILAGIAEQHK---SLHLVGGTVAVEPYGIAVEKGQTKMLEAINKALK 250 >gi|296119013|ref|ZP_06837586.1| amino acid ABC transporter, amino acid-binding protein [Corynebacterium ammoniagenes DSM 20306] gi|295968111|gb|EFG81363.1| amino acid ABC transporter, amino acid-binding protein [Corynebacterium ammoniagenes DSM 20306] Length = 356 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 88/210 (41%), Gaps = 10/210 (4%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +I +RG L G++ + A G+ +GF+VD ++ IF D +++ + L + E Sbjct: 102 NIIERGRLIVGVDQSHNLLSYRDAATGELRGFEVDLAHEIAEDIFGDRNRVDFRFLESAE 161 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R AL + +DI+ R T RE + F ++ GI+SV Q SG + Sbjct: 162 RTRALANGTVDIVIRTMTITPDREKEIA--FSQPYMITDTRMLVLTSSGITSVEQTSGRT 219 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C G+T + D+ + ++ + + + + + +A D + L + Sbjct: 220 LCAVDGSTALDKIPDFAP----NSNLLITKSWGDCLMSLQLGQANAVVVDDALLSGMMAQ 275 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + S I+ + + + + D + Sbjct: 276 DPYSS---IVGETLDTEVYGIGVRKPDAHY 302 >gi|289671688|ref|ZP_06492578.1| glutamine ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. syringae FF5] gi|330982576|gb|EGH80679.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 277 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 89/238 (37%), Gaps = 13/238 (5%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKI 78 + +A L D+ + L CG+ + F+ + G DVD C+AL+ + + + Sbjct: 18 SAVHADQLSDVMSKKSLSCGVYADVPPFSAPDPQTRELVGMDVDLCKALAKHMGVE---L 74 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + PL+ + R ++ ++D++ N +T R + F Y + ++ Sbjct: 75 ELKPLSVEARIPEVKMGRVDVIFANLAYTKSRAEQIQ--FSDPYYIAKETLVVRAANADQ 132 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S G I G+T+E ++ P+ F+ A + ++ + Sbjct: 133 PKSFFKGKRISSTKGSTSEQSIR------LADATPVTFQDTGSAYMALQQNKVVGLVTNT 186 Query: 199 SALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L E I + ++ P+ + QG+ + V+ + M A E+ Sbjct: 187 MTAIKLVGQAKAGGVELAIAKEPMALEPIGAGMRQGEPAFLAKVNESLREMEAAGEID 244 >gi|225570416|ref|ZP_03779441.1| hypothetical protein CLOHYLEM_06516 [Clostridium hylemonae DSM 15053] gi|225160787|gb|EEG73406.1| hypothetical protein CLOHYLEM_06516 [Clostridium hylemonae DSM 15053] Length = 289 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 68/226 (30%), Gaps = 15/226 (6%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 G G + + NG++ GFD+D + + K P++ + + Sbjct: 44 DDGTFVVGFDAAFPPYGYKDDNGEYVGFDLDLAQEVCDRNGWKLKK---QPIDWDSKDME 100 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 L S ID + + + + Q ++ + I L+G + VQ Sbjct: 101 LSSGTIDCIWNGFTMNGREDK---YTWSDPYVDNSQVIVVPEDSDIKEFKDLAGKMVEVQ 157 Query: 152 AGTTTELTLADYFKAHNMKYHPI-------VFERVEEIDAAYRAHRCDAYTGDISALYAL 204 A ++ TL K + + C+A D A Sbjct: 158 ADSSALHTLESDDKEEGGQAELAATFGALNQVADYNTAFMDLESGACEAIAMD--VGVAN 215 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + R +L + +S +G+ E + V T M Sbjct: 216 YQIDSRGGGFRLLDEKLSTEQYGIGFKKGNEELRDTVQKTLNEMAE 261 >gi|123441810|ref|YP_001005794.1| arginine-binding periplasmic protein 2 precursor [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088771|emb|CAL11577.1| arginine-binding periplasmic protein 2 precursor [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 249 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 84/250 (33%), Gaps = 19/250 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +IL ++ T+ T S ++ + F + AN + GFD Sbjct: 1 MKKLLLATILSGMVFSATAAETTHSTE-------TIRFAASATYPPFESIGANNEIVGFD 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + AL+ K+ D + D T R + F Sbjct: 54 MDLAKALCKQM---EANCTFTNQAFDSLIPALKFKRYDAVISGMDITPERSKQVA--FSQ 108 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K SS + L G I ++ GTT + L D + ++ + Sbjct: 109 PYYANSAIVIAPKG-KFSSFADLKGKKIGMENGTTHQKYLQDKHPE----IQTVAYDSYQ 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + TN + + L A+ +T Sbjct: 164 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPNLAAVGEHVTDPQYFGTGLGIAVRPDNTALL 223 Query: 239 NIVSWTHYAM 248 ++ A+ Sbjct: 224 EKLNKAIDAV 233 >gi|295700121|ref|YP_003608014.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295439334|gb|ADG18503.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 262 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 90/253 (35%), Gaps = 17/253 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M++ +S++ L + + A + + L+ GI F +G +GFD Sbjct: 1 MFRKLQLSLIVAAALVGSLGTVGA------QAQDTLRFGIEAAYPPFESKSPSGQLQGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ S + ++ AL++++ D+++ + T R+ S+ +P Sbjct: 55 VDVGNAVCSKLGVK---CVWVENAFDGLIPALEARKFDVINSAMNITDKRKQSIEFT-KP 110 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I + V L G + V G++ E L ++ + ++ + Sbjct: 111 IYIVPIVMVARRGSGLLPDVKSLQGKRVGVLQGSSQEDFLKAHWANAG--VTVVSYQDQD 168 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDT 235 ++ A R DA + L E+ I+ +S + +GD Sbjct: 169 QVYADLVGGRLDAAVQEAQTAQDGFLGKPAGHEYAIVGKPLSDPATLGEGTGWGLRKGDK 228 Query: 236 EWYNIVSWTHYAM 248 V+ A+ Sbjct: 229 ALVAKVNAALDAL 241 >gi|256059130|ref|ZP_05449339.1| hypothetical protein Bneo5_02065 [Brucella neotomae 5K33] gi|261323081|ref|ZP_05962278.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella neotomae 5K33] gi|261299061|gb|EEY02558.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella neotomae 5K33] Length = 257 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 72/246 (29%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ +I + + L IK G LK G F + GFD Sbjct: 1 MKFAQILATAGIIPAVLFTGAMAGENLDAIKSAGVLKIGTEGTYAPFTYHDKDNKLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A++ + P ++ L + + D + T R+ F Sbjct: 61 VEIGEAIAGKLGVKPE---FVEGKWDGLIAGLDANRYDAVINQVGITEERKK--KFNFSN 115 Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + K I + L G Q+ T+ LA A + + Sbjct: 116 PYIVSKVVLIVNDKNDTIKDFADLKGKK-AAQSLTSNYGRLAKEAGAK-----LVATDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ R DA D + + + ++ + + + +GD E Sbjct: 170 DQSIQLVLTGRADATLNDSLSYLDFRKHQPKAPV-KVVAEKDEATASGIIVRKGDDELVA 228 Query: 240 IVSWTH 245 ++ Sbjct: 229 AINKAL 234 >gi|229159506|ref|ZP_04287522.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus R309803] gi|228623963|gb|EEK80773.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus R309803] Length = 264 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 79/252 (31%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKDSATTSSSGEKEFRYAMSGLYKPFNYKENDGKLAG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + P I + LQ+K+ D++ + T R + F Sbjct: 61 FDVEIGAALAKKMNMKPVPIT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVNF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTSISSPEDLKDKKIGVVKASTFKDLVA------KYTDKITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRIDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|213852498|ref|ZP_03382030.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 217 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 82/240 (34%), Gaps = 25/240 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDANNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + F Sbjct: 48 VDLANALCKEI---DASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + P + + L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVGDKVTDKDYFGTGLGIAVRQGNTELQ 217 >gi|209516645|ref|ZP_03265498.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209502920|gb|EEA02923.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 259 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 72/249 (28%), Gaps = 14/249 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + ++ + NA L IK G + G F G GFDV+ Sbjct: 2 KPIRSLAMIALLQAVLAHPANADDLAQIKASGVFRIGTEGTYAPFTYHDDAGKLTGFDVE 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + P Q++ N + L + D + T R+ L + Sbjct: 62 LASAIAQRLGVKP---QFIEGNWEGLIGGLDVNRYDAVVNEVAITDERK--LKYDYSDPY 116 Query: 123 YFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 I+ I S L G T L AH I + E Sbjct: 117 ITSHAVLIVASDNTTIRSFDDLKGRKSA----NTLSSNLGRIAAAHG--ALVIPAQGFNE 170 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD--IISKSPLAPAIIQGDTEWYN 239 A R DA D + K V+ D S A I +G+ + Sbjct: 171 SIELLVAGRVDATVNDSLSFLDYKKREPDAKIKVVAVDTSPDSSDKSAVLIRKGNPKLRV 230 Query: 240 IVSWTHYAM 248 ++ M Sbjct: 231 AINDALVGM 239 >gi|297619590|ref|YP_003707695.1| extracellular solute-binding protein family 3 [Methanococcus voltae A3] gi|297378567|gb|ADI36722.1| extracellular solute-binding protein family 3 [Methanococcus voltae A3] Length = 261 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 83/231 (35%), Gaps = 10/231 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 F + N + ++++ L G + F + NG GFD+D + + Sbjct: 20 SFAGCTDNGNANSNVEEPYVLTVGSSVDFRPFEYMDENGKPTGFDMDIIHEIGRRL---D 76 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKK 134 +I+ + AL +K+ D + T R + F + GQ + Sbjct: 77 MEIEIIDSQFGGLIPALNTKKFDCVISAMTITENRSKEVK--FSEPYFEAGQILSVNKDN 134 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+++ LS + VQ TT +L ++ A Y + ++ + + + DA Sbjct: 135 NEITTLEDLSDKKVGVQIATTGDLIASEN--ASKYNYEVKQYNKIGDAFMDMKNGKIDAV 192 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D + A + + P + + D+++ A DTE + Sbjct: 193 LVDN--VVATEYFQENPGLYKLTGDLMTSESYGIATRLDDTELSEKIDKAL 241 >gi|330957238|gb|EGH57498.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 254 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 81/256 (31%), Gaps = 27/256 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 MYK + + ++F+ ++ GI F A+G GFD Sbjct: 3 MYKKILLIAAATLAFSSSAFAE------------KMRMGIEGAYPPFNNKDASGQVVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + AL + + + + + + AL +++ D L + T R + F Sbjct: 51 REIGDALCAKMKVE---CEVVTSDWDGIIPALNAEKFDFLISSLSITDER--KQVVDFTD 105 Query: 121 ITYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 Y + F+ K + + L+G S+ Q T L D + Sbjct: 106 PYYSNKLQFLAPKTSSVDVSSIEKAKESLAGKSVGAQRSTLAASWLEDKLE----IMDAK 161 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ E + R D D Y + + ++ + A+ +G Sbjct: 162 LYDTQENAFLDLLSGRVDVMLADKYVSYEWLKSEAGQNFEFKGEPVVQNDKIGIAVRKGS 221 Query: 235 TEWYNIVSWTHYAMVT 250 E ++ ++ Sbjct: 222 DELRERLNVALKEIIA 237 >gi|300784269|ref|YP_003764560.1| ABC transporter substrate-binding protein [Amycolatopsis mediterranei U32] gi|299793783|gb|ADJ44158.1| ABC transport system substrate-binding protein [Amycolatopsis mediterranei U32] Length = 308 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 79/227 (34%), Gaps = 8/227 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + +K G L G G G + GFD++ + +S+ + DP KI + Sbjct: 57 AGSPVFAKMKSAGALTVGAKDDQPGLGMKDPTTGKFGGFDIEIAKLVSAGLGFDPEKITF 116 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISS 139 +++ R + + ++ T R+ ++F + GQ ++ K I+ Sbjct: 117 RTVDSGAREQTIANGDVNYYVGTYSITDKRKAL--VSFAGPYFLAGQDLLVRKDDSSITG 174 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G +C G+T + + + F++ + ++ DA T D + Sbjct: 175 KDTLKGKKVCSVTGSTPIQKIRSEN--LTEPGNIVEFQKYSQCVEKLQSKDVDAVTTDDA 232 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 L P ++ S + + D + V+ Sbjct: 233 ILKGYAAQ--EPDSLKVVGQTFSTEKYGIGLNKDDKVLRDKVNDILQ 277 >gi|171059885|ref|YP_001792234.1| extracellular solute-binding protein [Leptothrix cholodnii SP-6] gi|170777330|gb|ACB35469.1| extracellular solute-binding protein family 3 [Leptothrix cholodnii SP-6] Length = 263 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 87/257 (33%), Gaps = 12/257 (4%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + +L L L + L + R + + T + V + +G Sbjct: 1 MQRRPLVMSVVLGLSALLSPLAVQAQAALDTVMSRKLINIAVPTDFPPYGFVGIDLKPQG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 DVD +++ + I+ +P+ + R LQ+K+ D++ RE + F Sbjct: 61 LDVDMANLIAAKLGVK---IELIPVTSANRIPYLQTKKADLVISTLGKNAEREKV--IDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Q K I S + L+G ++ V G ++ L A FE Sbjct: 116 TAAYSPFFQAVFAAKGVAIKSPADLAGKTVAVTRGAIEDMELTKLAPA---GADIKRFED 172 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +A+ + + A S A + P ++ SP + +G+ + Sbjct: 173 NNATVSAFVSGQVQAIATGAS--VAGNMMQRSPQLGAEYKFLLKDSPNFIGVGKGEDKLR 230 Query: 239 NIVSWTHYAMVTAEELG 255 V+ A A EL Sbjct: 231 LKVNEIIAAAKAAGELD 247 >gi|319781052|ref|YP_004140528.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166940|gb|ADV10478.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 257 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 84/255 (32%), Gaps = 18/255 (7%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++ L L T+ A+ L IK+ G +K G F +G G Sbjct: 1 MKWLKSLIIAG-TLQALAVTAGHAGAN-LDQIKQAGVIKVGTEGTYAPFTYHDTSGALVG 58 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ +A++ + +++L L + + D + T R+ F Sbjct: 59 FDVEIAKAIADKLGVK---VEFLEGKWDGLIAGLDANRYDAVINEVGITDARKA--KYDF 113 Query: 119 RPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 I+ I + + L G Q+ T+ LA+ A + + Sbjct: 114 SDPYIASKAVLIVRGDNTDIKTFADLKGKKSA-QSLTSNFGKLAETNGA-----ELVGTD 167 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 ++ R DA D + K + + + + + +GD E Sbjct: 168 GFDQSIQLLLTGRADATINDSLSFLDFKKHKPDANVKIAAQE-ENADYSGVIVRKGDPEL 226 Query: 238 YNIVSWTHYAMVTAE 252 ++ A + A+ Sbjct: 227 VAAINKAL-ADIKAD 240 >gi|298290460|ref|YP_003692399.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296926971|gb|ADH87780.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 267 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 78/231 (33%), Gaps = 10/231 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 +A L I+ ++ + F V A+ KG+DVD + ++ + Sbjct: 25 APLPAHADALATIEANKVIRIAVPQDFPPFGTVGADMQPKGYDVDMAKLIADKMGVK--- 81 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 ++ +P+ + R LQ+ ++D++ + RE + F G + Sbjct: 82 LELVPVTSANRIPYLQTNKVDLVISSLGKNPDREKV--IDFSAAYAPFFNGVFGPAEVAA 139 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 LSG ++ V G +L L A +E +A+ + + D Sbjct: 140 KDAKDLSGKTVGVTRGAVEDLELTKIAPA---DVTIKRYEDNNGTISAFLSGQVDLIATG 196 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 A+ P + + +I SP + + + V+ A Sbjct: 197 NVVAAAILER--NPPKKPEIKFLIKNSPCFIGLNKNEPALLAKVNDIIAAA 245 >gi|157146480|ref|YP_001453799.1| hypothetical protein CKO_02240 [Citrobacter koseri ATCC BAA-895] gi|157083685|gb|ABV13363.1| hypothetical protein CKO_02240 [Citrobacter koseri ATCC BAA-895] Length = 245 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 82/249 (32%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + A+ GFD Sbjct: 3 MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESMDASNKIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + F Sbjct: 50 VDLANALCKEI---DATCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI + +S+ QL G + VQ GTT + + D + ++ + Sbjct: 105 PYYDNSALFIGQQG-KYTSIDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + D P + + K L A+ QG+TE Sbjct: 160 NAKLDLQNGRIDGVFGDTAVVTEWL--KDNPKLAPVGDKVTDKDYFGTGLGIAVRQGNTE 217 Query: 237 WYNIVSWTH 245 + Sbjct: 218 LQQKFNTAL 226 >gi|153009565|ref|YP_001370780.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151561453|gb|ABS14951.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 268 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 69/220 (31%), Gaps = 15/220 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 LK G F +K +G GFDVD +AL + ++ +++ ALQ+ Sbjct: 35 KLKIGTEGAYPPFNFIKPDGTLSGFDVDIAKALCEEM---KAQCEFVTQEWDGAIPALQA 91 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152 + D + T R+ + F Y G K I + L+G +I VQ Sbjct: 92 GKFDAFIASMSITDERKK--QVDFSNKYYNTPPGIAAPKDTDIKGVTKEDLAGKTIGVQV 149 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT F + EE R DA D L + D Sbjct: 150 STTHSNYSEKTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLAEWLKSPDGAC 205 Query: 213 EHVILPDIISKSPLAP----AIIQGDTEWYNIVSWTHYAM 248 ++ P A +G E + A+ Sbjct: 206 CKMVGTFPPVIEIHGPGAGVAFKKGRPELVEKFNAAIKAI 245 >gi|187919667|ref|YP_001888698.1| family 3 extracellular solute-binding protein [Burkholderia phytofirmans PsJN] gi|187718105|gb|ACD19328.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 274 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 38/239 (15%), Positives = 79/239 (33%), Gaps = 11/239 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++ L L + +A L +I K G ++ G+ F + + G+D+D Sbjct: 22 LAFTALGALCALPSAAHADALDNIAKSGTVRIGVFEDYPPFGSIGPDMKPMGYDIDVANL 81 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + A+ +K++ + + R L + D+L T RE + F Sbjct: 82 IGKAL---NAKVELVQVTGDNRMAYLADHKADMLLS-VGQTPEREKV--IDFSQPYAPYY 135 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 K + + + L+G SI V GT +L++ + F+ +A+ Sbjct: 136 LAVFGPKALPVKNAADLAGKSISVARGTLEDLSVTKIAP---PTANIKRFDDPNGAISAF 192 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + + P+ + SP + + + V T Sbjct: 193 LSGQVQLMVVGNDVGATILAR--HPANDPEQKFSLFSSPDHVGLNKNEPRLKQKVDETI 249 >gi|171320700|ref|ZP_02909714.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171094060|gb|EDT39156.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 317 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 86/244 (35%), Gaps = 11/244 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCR 65 + ++ F+ + S L I +R + G+ F + GF+VD Sbjct: 50 ALFVAALLSAFSGVARADSTLDRIHQRHKITIGVILSGPPFGSLDPATQKPVGFNVDLAN 109 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + D ++ P+ R LQ ++D L N + T R L A P Sbjct: 110 DVAKRLGVD---VELTPVQPSNRVQFLQQGKVDALIANMELTKERAEILSYAPTPF-ESI 165 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G I K GI S + L G +CV G+ LA + A F E A Sbjct: 166 GGALIARKDSGIKSWADLRGKPVCVSQGSNYTKPLATEYGA-----QVKAFRGQPESLLA 220 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R + C A L L N ++ LP + SP + +G+T+ N + Sbjct: 221 LRGNNCVAAVHVAPTLRMLVARNPDWKDYTTLLPTDLIPSPAVIWVRKGETDTQNALDRI 280 Query: 245 HYAM 248 Sbjct: 281 VQDW 284 >gi|238762600|ref|ZP_04623570.1| Extracellular solute-binding protein family 3 [Yersinia kristensenii ATCC 33638] gi|238699245|gb|EEP91992.1| Extracellular solute-binding protein family 3 [Yersinia kristensenii ATCC 33638] Length = 252 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 37/244 (15%), Positives = 84/244 (34%), Gaps = 18/244 (7%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + L+ S A + I G++ G F + +G+ GFD+D AL Sbjct: 1 MALLTGLILSAPVAAQTIETI------SFGVDGGYPPFDVLAPSGEITGFDIDIANALCD 54 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + +K ++ + AL +++ D + + T R+ + F Y Sbjct: 55 NL---HAKCVFVKQPFESMIAALNARKFDAIIASLSITDERKK--EVDFTDRYYRSAAQL 109 Query: 130 IMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + K + V+ L G ++ VQ G+ E ++ + + + + + Sbjct: 110 VARKGSPLLPDVASLKGKTVGVQTGSIHETYAKKHWG--GQGVKIVSYANQDNVYLDLLS 167 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWYNIVSWT 244 R +A D + + R + +I + A+ + + + ++ Sbjct: 168 GRINASLQDNIQAASSFIDTPRGQKFAFAGPVIQDETISSDVGIAVGKDNPALRDALNGA 227 Query: 245 HYAM 248 A+ Sbjct: 228 IKAI 231 >gi|325499701|gb|EGC97560.1| arginine-binding periplasmic protein 2 precursor [Escherichia fergusonii ECD227] Length = 271 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 93/260 (35%), Gaps = 28/260 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + V +L L F + + N L G + + V A+ GFD Sbjct: 26 MKQKLLVMLLA--GLSFQATAANTKT---------LHFGTSATYAPYEFVDADNQIVGFD 74 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A+ + ++ Q+ + L+ K+ D + D T RE ++F Sbjct: 75 IDVAKAVCKEM---QAECQFTNQSFDSLIPGLRFKKFDAVIAGMDMTAKRE--QQVSFSQ 129 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ +K +S ++L G I ++ GTT + L D K + ++ Sbjct: 130 PYYEGLSAVVVTRKGAYNSFAELKGKKIGLENGTTHQRYLQDKQKE----ITAVAYDSYL 185 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPL----APAIIQGDT 235 +++R D GD + A+ ++ I+ + A+ +G+ Sbjct: 186 NAFTDLKSNRLDGVFGD---VAAIGKWLKNNPDYAIMDERAKDPEYYGKGLGIAVRKGND 242 Query: 236 EWYNIVSWTHYAMVTAEELG 255 ++ + + E Sbjct: 243 ALLAEINAALDKVKASPEYA 262 >gi|313123229|ref|YP_004033488.1| ABC amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279792|gb|ADQ60511.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 279 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 35/235 (14%), Positives = 78/235 (33%), Gaps = 16/235 (6%) Query: 18 TSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 ++ + + + +K + G+ F +GF++D R L+ I Sbjct: 24 SACAVESDNSVRVYNHVKSSKTITWGVKFDTALFGIKSVKTNKLEGFEIDLARLLTKEIL 83 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 K +++ + ++ + L++ +D + T R+ + F + G + Sbjct: 84 GKDGKAKFIEVTSQTKIPQLKNNNLDAVLATMTITDERKK--SVDFSTPYFKAGTSLMTK 141 Query: 133 KKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 I S+ L+ G V GTT +A + A A + Sbjct: 142 TSSPIKSIKDLNHKGRVAIVVKGTTAADDIARLAPKAK----IRQYNDYGACTNALLAGQ 197 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 DA D L + + ++ ++ P A+ +G T+ ++ Sbjct: 198 GDAVATDNGILAGIAEQHK---SLHLVGGTVAVEPYGIAVEKGQTKMLEAINKAL 249 >gi|223985125|ref|ZP_03635221.1| hypothetical protein HOLDEFILI_02527 [Holdemania filiformis DSM 12042] gi|223962947|gb|EEF67363.1| hypothetical protein HOLDEFILI_02527 [Holdemania filiformis DSM 12042] Length = 269 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 85/266 (31%), Gaps = 23/266 (8%) Query: 1 MY-KDFFV---SILCLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEV 50 M K + I ++ + + L I++RG L+ G + Sbjct: 1 MKYKSLRLRAGLIAAAVVFILSGCQSGGQTKGEGDLLSQIQQRGVLRIGTEGTYSPNSYH 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 +G+ GFDV+ R ++ + ++ F + S ++D + Sbjct: 61 DESGELVGFDVEVARGVAEQLGVKAE---FVEAEWDSLFAGMDSGRVDTVINE--VEYSE 115 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 E + F + ++ I+ L G Q T++ +A+ + A Sbjct: 116 ERAEKYDFSDPYTYVHGALLVAADNPEIAGFDDLKGKRSA-QNMTSSWGRMAESYGA--- 171 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + + + + R DA +A Y + ++ + S L Sbjct: 172 --EVVSVDTLTQCVELLTSGRVDATLNAETAFYDYLKQHPEAPVTIVAMTESTTSSL-IP 228 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255 + + + E ++ M + EL Sbjct: 229 VKKNNPELVEAINNALQTMRDSGELA 254 >gi|306831271|ref|ZP_07464431.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426507|gb|EFM29619.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 280 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 37/258 (14%), Positives = 74/258 (28%), Gaps = 17/258 (6%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVK 51 M K V L L+ + +++ K G + G + V Sbjct: 1 MKFKKVLVGALALVSTLTLAACSSSSSKKATSTDQWDTYVKNGEITIGFDNTFVPMGYED 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G GFD+D A+ +++ +N + L + ID++ T R Sbjct: 61 EDGSNVGFDIDLANAVFKEYG---ITVKWQSINWDMKETELNNGTIDLIWNGYSITDERA 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHN 168 + F + Q + K GI+S + + + Q+G++ + K Sbjct: 118 E--KVLFTNPYMVNEQVLVTKKSSGITSFADMKDKVLGAQSGSSGYDAFTSNPEVLKDIV 175 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 +E + + R D D + I+ A Sbjct: 176 SGGDATQYETFTQALIDLKNDRIDGLLIDKVYANYYLEQEGELDNYNIISSEFDGEDFAV 235 Query: 229 AIIQGDTEWYNIVSWTHY 246 + D ++ Sbjct: 236 GARKADKTLVKKINQAFK 253 >gi|256848428|ref|ZP_05553870.1| amino acid ABC transporter substrate-binding component [Lactobacillus coleohominis 101-4-CHN] gi|256714695|gb|EEU29674.1| amino acid ABC transporter substrate-binding component [Lactobacillus coleohominis 101-4-CHN] Length = 265 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 81/256 (31%), Gaps = 24/256 (9%) Query: 1 MYKDFF------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K S+L ++ L S++++ +KK G L G+ ++ NG Sbjct: 1 MKKWLKRISVIGASLLAMVALAACGRSSSSNSPQLVKK-GTLTVGLEGTYAPYSYR-ENG 58 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GF+VD RAL+ + ++++P + S + D+ N T R+ Sbjct: 59 KLTGFEVDMARALAKKMGYK---VKFVPTKWDSLIAGVGSHKFDMAINNIAMTPERQK-- 113 Query: 115 GLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + IM K I +V+ + G I GT + + + Sbjct: 114 AYLFSTPYIYSKTSLIMKKDNNDIKNVNDIKGKKIAAATGTANADNVKKFGGDN------ 167 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP---LAPAI 230 + + R R A A + + + SK P + + Sbjct: 168 VSSPDFATAMSLIRQGRVQAAMNSKEAFL-YYQRTNNADDLKEMTVPTSKIPSQKIGILM 226 Query: 231 IQGDTEWYNIVSWTHY 246 + + Sbjct: 227 AKNNKGLKKKTDKALN 242 >gi|308277190|gb|ADO27089.1| ABC-type amino acid transport [Corynebacterium pseudotuberculosis I19] Length = 322 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 10/216 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPS 76 T + + I++RG L GI+ + A G+ +GF+VD R +S IF DP+ Sbjct: 62 TGSDADPENIRKIRERGRLMVGIDQSQNLLSFRNTATGELQGFEVDLAREISRDIFGDPT 121 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 KI + ++A AL++ +D+ R+ T R + F + ++HK G Sbjct: 122 KIDFRYIDADTWVKALENNDVDLAIRSISIT--RGRQDQVFFSTPYFSGKTKLLVHKNSG 179 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 ISSV L G ++C A +T ++ + A + DA Sbjct: 180 ISSVDDLPGKTVCATAESTGAQRTRYVAPRAK----LLIVSSSADCLLALQQGHTDAVIS 235 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 D + L + + I+ + +++ A + Sbjct: 236 DDTILSGMLAQDP---FTEIVGNALAEEHYGIAFAK 268 >gi|300859245|ref|YP_003784228.1| hypothetical protein cpfrc_01828 [Corynebacterium pseudotuberculosis FRC41] gi|300686699|gb|ADK29621.1| hypothetical protein cpfrc_01828 [Corynebacterium pseudotuberculosis FRC41] gi|302206936|gb|ADL11278.1| Bacterial extracellular solute-binding protein, family 3 [Corynebacterium pseudotuberculosis C231] Length = 323 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 10/216 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPS 76 T + + I++RG L GI+ + A G+ +GF+VD R +S IF DP+ Sbjct: 63 TGSDADPENIRKIRERGRLMVGIDQSQNLLSFRNTATGELQGFEVDLAREISRDIFGDPT 122 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 KI + ++A AL++ +D+ R+ T R + F + ++HK G Sbjct: 123 KIDFRYIDADTWVKALENNDVDLAIRSISIT--RGRQDQVFFSTPYFSGKTKLLVHKNSG 180 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 ISSV L G ++C A +T ++ + A + DA Sbjct: 181 ISSVDDLPGKTVCATAESTGAQRTRYVAPRAK----LLIVSSSADCLLALQQGHTDAVIS 236 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 D + L + + I+ + +++ A + Sbjct: 237 DDTILSGMLAQDP---FTEIVGNALAEEHYGIAFAK 269 >gi|225378340|ref|ZP_03755561.1| hypothetical protein ROSEINA2194_04001 [Roseburia inulinivorans DSM 16841] gi|225209777|gb|EEG92131.1| hypothetical protein ROSEINA2194_04001 [Roseburia inulinivorans DSM 16841] Length = 299 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 101/310 (32%), Gaps = 42/310 (13%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS---------------------------ILGDIKKR 33 M K + L + + L +IK+ Sbjct: 1 MKKWNRILAAVLTLSLTAGLTACGGSTSDATANNASAADEGTVSNGSSEVYRTLDEIKES 60 Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G + G+ + F V NG+++G+D+ F L + D + ++ A R LQ Sbjct: 61 GTINIGVFSDKNPFGYVDENGEYQGYDIYFANRLGEDLGVD---VNFVSTEAANRIEYLQ 117 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQA 152 + ++DI+ N T R + F G + K I ++ + V + Sbjct: 118 TGKVDIILANFTVTDERAE--EVDFALPYMNVALGVVSPDSKVIENLDDWDSNDQMIVIS 175 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GTT E + D + ++ A A+ D + + A Sbjct: 176 GTTAETYMID----NYPDIPLQKYDSYATAKNALENGSGAAWVNDNTEVIAYA--LQNTG 229 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 V +P + S +APA+ +G+T + ++ + E + DT D Sbjct: 230 YTVGIPSLGSNDTIAPAVSKGNTTLLDWINDEIKTL---GEEQFFHADYEATLVDTYGSD 286 Query: 273 VQRFLGIDKS 282 + L ++ Sbjct: 287 YEESLVVEGG 296 >gi|308185549|ref|YP_003929680.1| ABC transport system, periplasmic solute-binding protein precursor [Pantoea vagans C9-1] gi|308056059|gb|ADO08231.1| Putative ABC transport system, periplasmic solute-binding protein precursor [Pantoea vagans C9-1] Length = 270 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 82/247 (33%), Gaps = 11/247 (4%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + L L L F + + + S + + G L+ + A+G + GFDV+F Sbjct: 9 TLLGTALALCSLSFCTLAASDSNPYGLIEPGQLRVASVGDSKPYTFTDASGQFTGFDVEF 68 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 R ++ I D + ++ + A+ + Q D T RE + + F Sbjct: 69 FRDVAHRIGIDK--VDFIGQDFSAIMPAVANGQYDAAVAAIGITPAREKT--VDFSTGYL 124 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 + G+ V+ L+ + V GT E ++F + + F Sbjct: 125 AGFLTVLTRSDSGVKDVASLAKHRLGVVQGTLQESYAVEHFP----QTDLVRFPDNNSAV 180 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 +A DA D A K +R +P AI +G + + Sbjct: 181 SALNNGTLDAIFLD---YEAAKSYAERFKLVSAADIPSFDAPAGIAIAKGKPAFKAALDG 237 Query: 244 THYAMVT 250 A + Sbjct: 238 AIKAAMQ 244 >gi|223939004|ref|ZP_03630889.1| extracellular solute-binding protein family 3 [bacterium Ellin514] gi|223892300|gb|EEF58776.1| extracellular solute-binding protein family 3 [bacterium Ellin514] Length = 278 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 81/250 (32%), Gaps = 21/250 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K+ F+ L +I S K L G+ F G+ G VD Sbjct: 20 KNAFIICLAVICFITAGCSQ--------KAHDKLIVGMELSYPPFEMTDEKGNPAGISVD 71 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + L + + ++ AL++ +ID++ + T R + + F Sbjct: 72 LAQTLGKYLNRE---VEIQNTPFDGLIPALKTGKIDLIISSMTATPER--AQSIDFSDPY 126 Query: 123 YFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G +++K I S+ L G ++ V+ GTT K +V ++ Sbjct: 127 LRTGLCLLVNKNSSIQSIQDLDQPGKTVAVKKGTTGHTYATGNMKQAK----VLVLDKES 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + DA+ D + Y + + + A I +G+TE + Sbjct: 183 ACVLEVVQGKADAFIYDQMSTY--QNWKHNEETTRPILKPFKEESWAVGIQKGNTELQSK 240 Query: 241 VSWTHYAMVT 250 V+ Sbjct: 241 VNQFLKDFKN 250 >gi|218551435|ref|YP_002385227.1| arginine-binding periplasmic protein 2 [Escherichia fergusonii ATCC 35469] gi|218358977|emb|CAQ91637.1| arginine-binding periplasmic protein 2 precursor [Escherichia fergusonii ATCC 35469] Length = 271 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 93/260 (35%), Gaps = 28/260 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + V +L L F + + N L G + + V A+ GFD Sbjct: 26 MKQKLLVMLLA--GLSFQATAANTKT---------LHFGTSATYAPYEFVDADNQIVGFD 74 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A+ + ++ Q+ + L+ K+ D + D T RE ++F Sbjct: 75 IDVAKAVCKEM---QAECQFTNQSFDSLIPGLRFKKFDAVIAGMDMTAKRE--QQVSFSQ 129 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ +K +S ++L G I ++ GTT + L D K + ++ Sbjct: 130 PYYEGLSAVVVTRKGAYNSFAELKGKKIGLENGTTHQRYLQDKQKE----ITAVAYDSYL 185 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPL----APAIIQGDT 235 +++R D GD + A+ ++ I+ + A+ +G+ Sbjct: 186 NAFTDLKSNRLDGVFGD---VAAIGKWLKNNPDYAIMDERAKDPEYYGKGLGIAVRKGND 242 Query: 236 EWYNIVSWTHYAMVTAEELG 255 ++ + + E Sbjct: 243 ALLAEINAALDKVKASPEYA 262 >gi|317048165|ref|YP_004115813.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316949782|gb|ADU69257.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 242 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 46/219 (21%), Positives = 85/219 (38%), Gaps = 14/219 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 + ++ I+ ++ N GFDVD ALS + Y ++ K Sbjct: 18 QAADPIRVAIDPTFPPMEYIQ-NNQRTGFDVDLAAALSKQMG---RPWVYTDMDFKAMVP 73 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASIC 149 ++ + + DI+ T R+ + F + G ++ K I + L+G + Sbjct: 74 SVLAGRQDIVLSAIYITDDRKKV--VDFTDPYFSAGLVVMVKKGDTRIKTPQDLAGKRVA 131 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 VQ GT + LAD F + + E+ EE+ + A R DA AL + Sbjct: 132 VQVGTKSVKVLADQFPSA----QSVEVEKNEEMFNSLEAGRADAVVTGKP--AALLYSKT 185 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R + ILP+ ++ A+ + + E ++ A+ Sbjct: 186 RGTT-QILPEPLTHEEYGIAVSKREPELRQQLNDALKAI 223 >gi|205353470|ref|YP_002227271.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205273251|emb|CAR38214.1| lysine-arginine-ornithine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628562|gb|EGE34905.1| lysine-arginine-ornithine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 260 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 91/279 (32%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + + + ++ G +T F+ A G++ GFD Sbjct: 1 MKKTVLALSLLIGLGATAAGYAALPQ--------TVRIGTDTTYAPFSSKDAKGEFIGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I ++ L G + V G+T E D ++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + A R DA D A L E+ + + + D Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGGGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE EL ++++K + +V Sbjct: 226 TELKAAFDKALI------ELRQDGT-YDKMAKKYFDFNV 257 >gi|255325801|ref|ZP_05366893.1| bacterial extracellular solute-binding protein, family 3 [Corynebacterium tuberculostearicum SK141] gi|255297013|gb|EET76338.1| bacterial extracellular solute-binding protein, family 3 [Corynebacterium tuberculostearicum SK141] Length = 337 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 44/223 (19%), Positives = 86/223 (38%), Gaps = 15/223 (6%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 DI KRG L G++ + A GD +GF+VD R ++ IF DP+K+ + + + + Sbjct: 86 DIVKRGRLIVGVDRSNNLMSYRDAATGDVRGFEVDIAREIARDIFGDPNKVDFRFIESSD 145 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R AL + +D++ R + RE + F ++ GI SV +G + Sbjct: 146 RVNALNTGAVDMIVRTMTISPERERDVA--FSIPYMNTQTRMLVLTNSGIKSVKDAAGKT 203 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C +T T+ ++ ++ + A + ++ D D + L + Sbjct: 204 LCGVGASTALETIREHAPK----SDILITRSWGDCLMALQLNQADGIVVDDALLSGMAAQ 259 Query: 208 NDRPSEHVILPDIISKSPLAPAII-----QGDTEWYNIVSWTH 245 + I+ + + A+ V+ T Sbjct: 260 DS---YTSIVGEPLETENYGVAVRRPSKQHNTRPLLRQVNSTL 299 >gi|312899028|ref|ZP_07758415.1| putative glutamine ABC transporter periplasmic protein [Megasphaera micronuciformis F0359] gi|310619935|gb|EFQ03508.1| putative glutamine ABC transporter periplasmic protein [Megasphaera micronuciformis F0359] Length = 255 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 86/246 (34%), Gaps = 15/246 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+K F +++ L ++ ++ + + L G+N F + D+ GFD Sbjct: 1 MFKKFL-ALITLTLIAVSALTGCGTSSPQGNTEKTLIIGMNPNFPPFEFTQGE-DYVGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ + P + ALQS QID+++ D T R + F Sbjct: 59 VDLSKAIAEKLGMKPE---IKAMAFDGLIPALQSGQIDLIASGMDATPERREH--VNFTQ 113 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + DG ++ K I S L ++ Q GT A F + Sbjct: 114 TYFKDGYTIVVRKDNDTIHSFDDLKDITVGAQMGTKAADY------AKQYGAVVKEFNQN 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ +H CDA + + + I + +A A + ++E Sbjct: 168 DQCWMELESHTCDAVVVNRVVALYFLNQGGN-KAFKTVGEPILSAGVAMATTKENSELTA 226 Query: 240 IVSWTH 245 V Sbjct: 227 KVDKAL 232 >gi|172037363|ref|YP_001803864.1| solute-binding family protein 3 [Cyanothece sp. ATCC 51142] gi|171698817|gb|ACB51798.1| putative extracellular solute-binding protein, family 3 [Cyanothece sp. ATCC 51142] Length = 276 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 83/257 (32%), Gaps = 11/257 (4%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + ++ LI A L IK+ G L G+ + F V G W G Sbjct: 1 MKNKSLILVLITLIFCSIFPSFALAETVLEKIKRTGELNAGVRKDAIPFGYVNQRGKWTG 60 Query: 59 FDVDFCRALSSAIFDDPSK---IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + VD + + D ++ + RF +Q +DI+ T T R + Sbjct: 61 YSVDLIHLIHKRLEKDLNQSIKLNLREATIDSRFRIVQRGDVDIMCGATTITQTRSKRVD 120 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + + L+ I GTTT+ + + + N K Sbjct: 121 FSVPFFMTGAQFLVKLEDAPNFDYNGSLNNIPIAFLPGTTTQEIIPQIYPSANWKN---- 176 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP-SEHVILP-DIISKSPLAPAIIQG 233 + EE + A D L + + V+LP I++ + Q Sbjct: 177 IKNREEGVRKLKRDEVKAVVSDGILLLGEIVQQGNNIEDFVLLPSQPITRELYGCILPQK 236 Query: 234 DTEWYNIVSWTHYAMVT 250 + +W V+ T + Sbjct: 237 NPQWKQFVNVTILSPEN 253 >gi|303256935|ref|ZP_07342949.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderiales bacterium 1_1_47] gi|302860426|gb|EFL83503.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderiales bacterium 1_1_47] Length = 256 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 80/260 (30%), Gaps = 18/260 (6%) Query: 1 MYKDFFVSI---LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDW 56 M K F++I L + T+ K L+ G N F K + D Sbjct: 1 MLKRSFLAIPLVAVLSMSLLTACGDKKEAAAPAKAEKVLRVGTNPTFAPFEFQAKGSNDL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D +AL + ++ + L AL + ID+ T R+ + Sbjct: 61 TGFDIDLAKALGKQMGYK---VELVNLGFDGLIPALSTGNIDLAVSGMSITEERK--NAV 115 Query: 117 AFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y G + + I ++ L G I Q GTT + A Sbjct: 116 DFCDPYYTSGLIVLVRPDETNIKGINDLVGKRIGAQIGTTGATKASSVKGA-----DVKQ 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E DA D + + ++ DI+ A +G+ Sbjct: 171 YNNANEPFIELDNKGVDAVINDQPVVAYY---LVNGGKGKMVGDIMEAEYYGIAAKKGNK 227 Query: 236 EWYNIVSWTHYAMVTAEELG 255 V+ A+ E Sbjct: 228 ALVKQVNEALAALKKNGEYD 247 >gi|229829574|ref|ZP_04455643.1| hypothetical protein GCWU000342_01671 [Shuttleworthia satelles DSM 14600] gi|229791563|gb|EEP27677.1| hypothetical protein GCWU000342_01671 [Shuttleworthia satelles DSM 14600] Length = 262 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 82/251 (32%), Gaps = 17/251 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIK----KRGFLKCGINTGLVGFAEVKANGDW 56 M K + ++ L + + ++ K K+ L + ++ N D+ Sbjct: 5 MKKIAVLGLVMLTSISILAACGSSKTDDSGKTGSEKKDTLTMATAADFPPYEYMEGN-DY 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 KG D++ +A++ + ++ + +QS + D R+ + Sbjct: 64 KGIDIELSQAIADKLGVK---LEIQNVPFDSIIAGVQSGKYDFGMSGITINDERK--QSV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Q I+ I+ L + I VQ GTT + + + + + Sbjct: 119 NFSDPYISAVQSIIVKSDSSIADKDALKDVSKIGVQTGTTGDSDATKDYGEDKITRYTVA 178 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + A + + DA D A + S ILP + A A+ + + Sbjct: 179 ----TDAIQALMSGKVDAVIIDN--KPAQEYVKANGSALKILPTAYEEEQYAIAVNKSND 232 Query: 236 EWYNIVSWTHY 246 + ++ Sbjct: 233 DLQKKINQAIK 243 >gi|330808625|ref|YP_004353087.1| putative amino acid transporter [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376733|gb|AEA68083.1| putative amino acid transporter [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 259 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 84/251 (33%), Gaps = 22/251 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L +L ++ + A ++ GI G F+ +G GFD Sbjct: 1 MNKLAMFGALALSVLSLSAVAEEA---------KPIRLGIEAGYPPFSMKTPDGKLTGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + K ++ AL+ K+ID + + T R+ + F Sbjct: 52 VDIGDALCEQM---KVKCTWVEQEFDGLIPALKVKKIDAILSSMTITDDRKK--NVDFTI 106 Query: 121 ITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y F+M + + ++L G + V +T + + + + + + Sbjct: 107 KYYHTPARFVMKEGSEVKDPLTELKGKKVGVLRASTHDRFATEVLVPAGI--NLVRYGSQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +E + A R DA D L L D + + A+ +GD Sbjct: 165 QEANLDMVAGRLDAMLADSVNLDDGFLKTDAGKGFAFVGPTYEDAKYFGGGAGIAVRKGD 224 Query: 235 TEWYNIVSWTH 245 + + Sbjct: 225 KVLADKFNAAI 235 >gi|313496590|gb|ADR57956.1| Cystine transporter subunit [Pseudomonas putida BIRD-1] Length = 264 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 73/227 (32%), Gaps = 12/227 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + L I+++G + G+ F+ NG GF+V+ L+ + + Sbjct: 25 AFAGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKLTGFEVELSELLAKELGVKA---KI 81 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGIS 138 P AL+SK++D++ + R+ + + K + I Sbjct: 82 QPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSEPYTVSGIQALILKKKAEQLNIK 141 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G + V GT E + +E A R R DA D Sbjct: 142 GAQDLAGKKVGVGLGTNYEQWVKKDVPQA----DVRTYEDDPSKFADLRNGRIDAILIDR 197 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A + + D S+ A+ +G+ E ++ Sbjct: 198 LAALEYAQKAK---DTQLAGDAFSRLESGVAMRKGEPELLAAINKAI 241 >gi|260469634|ref|ZP_05813798.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|259028601|gb|EEW29913.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] Length = 258 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 81/258 (31%), Gaps = 25/258 (9%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F ++ + L + S + L+ G F A+G GFD+D Sbjct: 6 RFVLAASVALTLAAGAASAQDN---------KLRIGTEGAYPPFNYANADGTLGGFDIDL 56 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 +AL + + D ++ + ALQ+ + D + T+ E + + F Y Sbjct: 57 GKALCAEMKAD---CEFTVQDFDGSIPALQAGKFDAIIN---ITITPERAEKVEFTRKYY 110 Query: 124 FDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + K I +S L G ++ VQ T + + + ++ Sbjct: 111 QTPPAIAVPKDSPIAGTSPEDLRGKALGVQTATIH----QKFAEQKYAGSTVKAYPTGDD 166 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSP-LAPAIIQGDTEW 237 R DA L D + D P + A+ +G+ E Sbjct: 167 ARTDMANGRLDAMMDGSIILTEWLKKPDGACCKLLGTLTADPAIHGPGVGIALQKGNKEL 226 Query: 238 YNIVSWTHYAMVTAEELG 255 + + A+ A + Sbjct: 227 ADKFNAAIDALRAAGKYK 244 >gi|306812688|ref|ZP_07446881.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily protein [Escherichia coli NC101] gi|305853451|gb|EFM53890.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily protein [Escherichia coli NC101] Length = 243 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 86/249 (34%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + F Sbjct: 48 VDLAQALCKEI---DATCTFSNQVFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D+ GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTH 245 ++ Sbjct: 216 LQQKLNTAL 224 >gi|239831851|ref|ZP_04680180.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] gi|239824118|gb|EEQ95686.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] Length = 273 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 78/252 (30%), Gaps = 17/252 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K V+ + I+ T + ++ L G F + +G GFDVD Sbjct: 10 KRITVAASMVGIVATTGGFAIGA--ASAEEPLKLIIGTEGAYPPFNFINPDGSLSGFDVD 67 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 RAL + ++ ++ ALQ+ + D + T R+ + F Sbjct: 68 IARALCEEM---KAECTFITQEWDGTIPALQAGKFDAYVSSMSITEERKK--QVDFSDKY 122 Query: 123 YFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G K I + L+G +I VQ TT F + E Sbjct: 123 YNTPPGIAAPKDTDIKGVTKEDLAGKTIGVQVSTTHANYAEHAFTE----STIKAYPTAE 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV----ILPDIISKSPLAPAIIQGDTE 236 E R DA D L T D + D I + A+ +G E Sbjct: 179 EYRLDMANGRLDAVNDDSVTLSEWLKTPDGACCKMVGTYPPDDNIHGVGVGVALKKGRPE 238 Query: 237 WYNIVSWTHYAM 248 + A+ Sbjct: 239 LVEKFNKAIKAI 250 >gi|322391759|ref|ZP_08065224.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Streptococcus peroris ATCC 700780] gi|321145239|gb|EFX40635.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Streptococcus peroris ATCC 700780] Length = 271 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 40/255 (15%), Positives = 82/255 (32%), Gaps = 20/255 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 K FV + F + ++ S + IK++G L + F V Sbjct: 4 KKWIFVLCSLIASFFLVACQSSNSSSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKN 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+D +A++ + ++ ++ +LQ+ + D+ T R+ Sbjct: 64 QVVGADIDMAQAIADELGVK---LEVSSMSFDNVLTSLQTGKADLAIAGISATDERKEV- 119 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGA---SICVQAGTTTELTLADYFKAHNMKY 171 F Y + F++ K + L+ +I Q GT E + + Sbjct: 120 -FDFSIPYYENKMSFLIRK-SDLEKYKDLNSIASANIAAQKGTVPESMVKEQLP----NA 173 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + E ++ + DA D + N + + + A AI Sbjct: 174 QLTSLTNMGEAVNELQSGKVDAVHMDEPVALSYAGKNSDLAVATVSLTMKEGEANAVAIK 233 Query: 232 QGDTEWYNIVSWTHY 246 +G ++ +V Sbjct: 234 KGSSDLKEVVDKVIQ 248 >gi|319892895|ref|YP_004149770.1| Glutamate ABC transporter, periplasmic glutamine- binding protein [Staphylococcus pseudintermedius HKU10-03] gi|317162591|gb|ADV06134.1| Glutamate ABC transporter, periplasmic glutamine- binding protein [Staphylococcus pseudintermedius HKU10-03] Length = 486 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 90/258 (34%), Gaps = 23/258 (8%) Query: 1 MY---KDFFVSILCLIILFFT-----SFSTNASILGDIKKRGFLKCGINTGLVGFAE--- 49 M K + ++ + + + + + IK RG L+ G++ Sbjct: 1 MKYLGKLMTMMLIVVFSISGIPAKYDAQAASEDQWDVIKDRGELRVGLSADYAPMEFERT 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V ++ G D++ + ++ + K++ + + AL++ +ID++ T Sbjct: 61 VNGEREYAGIDIELAKKIAKD---NGVKLKIVNMQFDSLLGALKTGKIDMIISGMTPTAE 117 Query: 110 REISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ + F Q ++ K K ++ L+ I Q TT E + Sbjct: 118 RKK--EVDFSDNYMTVDQKVVVRKKDKDKYKTLKDLAHHRIGAQKQTTQEELAQKEIE-- 173 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 R+ E+ + ++++ DA D + A N+ SK A Sbjct: 174 --GADVQSLTRLPEVILSLKSNKVDAIVMDSAVGKAYLEQNED-LTFSDASFADSKKQTA 230 Query: 228 PAIIQGDTEWYNIVSWTH 245 AI + + V+ + Sbjct: 231 IAIPKDSPKLLKRVNQSI 248 >gi|294669321|ref|ZP_06734400.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308731|gb|EFE49974.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 265 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 88/266 (33%), Gaps = 23/266 (8%) Query: 1 MYKDFFVSILCLIILFFT----------SFSTNASILGDIKKRGFLKCGINTGLVGFAEV 50 M K ++ C +L S A + + +N F + Sbjct: 3 MKKWLATALACSALLTACGGQGQNQGQESAPAGAQGGEKV-----YRVAMNAEFAPFEFM 57 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + + +GFDVD A++ A K+++ F AL + +DIL+ T Sbjct: 58 DSANNIQGFDVDLVNAMAKA---GNFKVEFKHQPWDSLFPALGNGDVDILASAVTITD-- 112 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNM 169 + + F Y Q ++ + K I S L + V GTT +L + + Sbjct: 113 DRKQTMDFSDPYYKITQVILVPQGKTIKSAEDLKQVNKVGVVTGTTGDLAASKTLGS--D 170 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 FE + + DA D + + N ++ ++ A Sbjct: 171 STKIARFENIILVTKELENGGLDAVISDSAVIANYIKNNGSKGFSMVEIPDFTEENYGFA 230 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255 + +GDT +++ + + E Sbjct: 231 VRKGDTATVAMLNDALKKVRESGEYD 256 >gi|237732152|ref|ZP_04562633.1| arginine-binding periplasmic protein 1 [Citrobacter sp. 30_2] gi|283832472|ref|ZP_06352213.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Citrobacter youngae ATCC 29220] gi|226907691|gb|EEH93609.1| arginine-binding periplasmic protein 1 [Citrobacter sp. 30_2] gi|291072131|gb|EFE10240.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Citrobacter youngae ATCC 29220] Length = 243 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 82/249 (32%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAQ-------------TIRFATEASYPPFESIDANNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ D + D T RE + F Sbjct: 48 VDLANALCKEI---DATCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +S+ QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFVGQQG-KYTSIDQLKGKKVGVQNGTTHQKFIMDKHPE----VTTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTH 245 + Sbjct: 216 LQQKFNAAL 224 >gi|170020734|ref|YP_001725688.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli ATCC 8739] gi|169755662|gb|ACA78361.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli ATCC 8739] Length = 243 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 85/249 (34%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + F Sbjct: 48 VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + + P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWL--KNNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTH 245 ++ Sbjct: 216 LQQKLNTAL 224 >gi|127514094|ref|YP_001095291.1| extracellular solute-binding protein [Shewanella loihica PV-4] gi|126639389|gb|ABO25032.1| extracellular solute-binding protein, family 3 [Shewanella loihica PV-4] Length = 242 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 79/258 (30%), Gaps = 27/258 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK--ANGDWKG 58 M K ++ ++L K++ +L G N F V + G Sbjct: 1 MNKSILLAGFTALLLLSGCG----------KEQDYLVVGTNAAFPPFEYVGGVSGDQVMG 50 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D R ++ ++ + +AL + +ID+++ T R+ + F Sbjct: 51 FDIDLARKVAEDAGK---TLKVENMKFDSLIVALNAGKIDMIASGMTITPERQA--SVDF 105 Query: 119 R-PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 P + + I S++ L+G VQ G+T + A F Sbjct: 106 SEPYYEATQVVLVNKQDDSIHSLADLTGKHFAVQLGSTAD------MMAKKYTQSVTAFN 159 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + + D D N E ++ A+ + E Sbjct: 160 TGFEAIMELKNGKVDLVLFDSEPAANYLAKNP---ELKLISLDFPPEFYGFAVAKSQPEL 216 Query: 238 YNIVSWTHYAMVTAEELG 255 ++ T M E Sbjct: 217 LASINKTLATMKQNGEYD 234 >gi|330998814|ref|ZP_08322541.1| glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Parasutterella excrementihominis YIT 11859] gi|329576028|gb|EGG57547.1| glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Parasutterella excrementihominis YIT 11859] Length = 256 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 80/260 (30%), Gaps = 18/260 (6%) Query: 1 MYKDFFVSI---LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDW 56 M K F++I L + T+ K L+ G N F K + D Sbjct: 1 MLKRSFLAIPLVAVLSMSLLTACGNKKEAAAPAKAEKVLRVGTNPTFAPFEFQAKGSNDL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D +AL + ++ + L AL + ID+ T R+ + Sbjct: 61 TGFDIDLAKALGKQMGYK---VELVNLGFDGLIPALSTGNIDLAVSGMSITEERK--NAV 115 Query: 117 AFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y G + + I ++ L G I Q GTT + A Sbjct: 116 DFCDPYYTSGLIVLVRPDETNIKGINDLVGKRIGAQIGTTGATKASSVKGA-----DVKQ 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + E DA D + + ++ DI+ A +G+ Sbjct: 171 YNNANEPFIELDNKGVDAVINDQPVVAYY---LVNGGKGKMVGDIMEAEYYGIAAKKGNK 227 Query: 236 EWYNIVSWTHYAMVTAEELG 255 V+ A+ E Sbjct: 228 ALVKQVNEALAALKKNGEYD 247 >gi|317486284|ref|ZP_07945116.1| bacterial extracellular solute-binding protein, family 3 [Bilophila wadsworthia 3_1_6] gi|316922454|gb|EFV43708.1| bacterial extracellular solute-binding protein, family 3 [Bilophila wadsworthia 3_1_6] Length = 252 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 86/246 (34%), Gaps = 21/246 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ L + + T AS L +T + F +G + GFD Sbjct: 1 MKR---IAALIMGFVLMTVLVAPAS-------AKELVVAHDTNFMPFEFKGPDGKFTGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ ++ + ++ P++ LQ+ +D+ T R + F Sbjct: 51 IELWETIAKKLG---LSYKFQPMDFNGIIPGLQTGNVDVGIAGMTITPERAKVVQ--FSN 105 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ + IS V L+G + V+ GT++ + D+ KA F Sbjct: 106 GYYTSGLKILVRDDEKGISKVEDLAGKVVAVKTGTSSVPFMKDFGKAK----ELKQFPNN 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + + DA D+ + A + + V+ P + QG+ E Sbjct: 162 DGMFFELLSKGVDAVVFDMPVVTAFANSAGKGKAKVVGP-LYEGQKYGIGFAQGNEELVK 220 Query: 240 IVSWTH 245 V+ Sbjct: 221 KVNGVL 226 >gi|188590808|ref|YP_001795408.1| high-affinity glutamine transporter, ABC transporter periplasmic protein peri_bind) [Cupriavidus taiwanensis LMG 19424] gi|170937702|emb|CAP62686.1| high-affinity glutamine transport protein, ABC transporter, periplasmic binding component peri_bind) [Cupriavidus taiwanensis LMG 19424] Length = 251 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 81/245 (33%), Gaps = 20/245 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + ++ L + S +A + L+ + + NG GFDV Sbjct: 4 RRKCLIAALSAVAGLTFGASAHA------QDSNVLRVATDATFPPMEFI-ENGKRTGFDV 56 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + A++ + ++++ ++ K L S++ D+ T R + F Sbjct: 57 ELVEAMAKTMGK---QVEWTNIDFKGLIPGLVSRRFDMAVSGIYITPERRKV--VDFTEP 111 Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ I+ L+G + VQ GT + L D + + + E+ + Sbjct: 112 YYTGGLVALVKSGNTAINKPEDLNGKKVSVQVGTKSVSFLRDTYP----QVTRVEVEKNQ 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E+ R DA A T ++ ++ A+ + E Sbjct: 168 EMFNLVEIGRADAAVTGKPAAMQYVKTRGG---LRVVEQQLTTEEYGMAVRKDTPELTRA 224 Query: 241 VSWTH 245 ++ Sbjct: 225 LNAAL 229 >gi|18313093|ref|NP_559760.1| solute-binding family 3 protein [Pyrobaculum aerophilum str. IM2] gi|18160601|gb|AAL63942.1| bacterial extracellular solute-binding proteins, family 3 [Pyrobaculum aerophilum str. IM2] Length = 282 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 88/244 (36%), Gaps = 10/244 (4%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + IKKRG L G + + V N G+DVD R +++A+ +++ + Sbjct: 47 SVDAIKKRGKLIVGTDATWPPWEWVMGN-QIVGWDVDIAREIANALG---VQLELRDMRF 102 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLS 144 A+++ +D+ WT RE L F Y + + + I+ V L Sbjct: 103 AGLLEAVRNGDVDLAISAITWTTEREKV--LEFSMPYYLESIVVVTKASRTDINKVEDLY 160 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G ++ VQ GTT E A + + + R DA D S AL Sbjct: 161 GKTVGVQIGTTHEEWAATNLEKPGKASVRRYDKVYPYMVEVLRRGDVDAIILDRSIATAL 220 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 LP ++ A+ + + +V+ ++ +L I QKN Sbjct: 221 VRKFPDLKIAFELPGSAG--YISVAMPKCAQDLKLVVNQVIENLIQTGKLDQIMQKNFEL 278 Query: 264 VSKD 267 + Sbjct: 279 FLQS 282 >gi|186476914|ref|YP_001858384.1| cationic amino acid ABC transporter periplasmic binding protein [Burkholderia phymatum STM815] gi|184193373|gb|ACC71338.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia phymatum STM815] Length = 258 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 86/251 (34%), Gaps = 24/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ + K+ ++ G++ F + NG GFD Sbjct: 1 MKKYTLCVALAVMASAAMA-----------KEWKTVRIGVDASYPPFESIAPNGHMVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL + + K ++ + AL+ K+ D++ + T R + F Sbjct: 50 VDLTKALCAKM---NVKCVWIAQDLDGIIPALKGKKYDMIVSSLTVTDKR--REQIDFSD 104 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I K + + L G + V+ G+T E Y++ + ++ Sbjct: 105 KLFDAPARMIAKKGSPLLPTAESLKGKHVGVEQGSTQEAYAKAYWEPRG--VTVVPYQNQ 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLA----PAIIQGD 234 +++ A R DA D + L R + ++ + + + D Sbjct: 163 DQVYADLATGRLDAALQDELQADSGFLKTPRGKDFAWAGREVKDAKTIGDGTAIGLRKED 222 Query: 235 TEWYNIVSWTH 245 E +++ Sbjct: 223 GELKAMLNKAL 233 >gi|297199735|ref|ZP_06917132.1| sugar-binding protein [Streptomyces sviceus ATCC 29083] gi|297147474|gb|EDY57926.2| sugar-binding protein [Streptomyces sviceus ATCC 29083] Length = 350 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 76/242 (31%), Gaps = 17/242 (7%) Query: 16 FFTSFSTNASILGDIKKR----GFLKCGINTGLVGFAEVKANG----DWKGFDVDFCRAL 67 + S + + + IK R L G++ + N D +GFD+D + Sbjct: 73 TLSPSSADGTTIDKIKAREGAKRKLIVGVDQNSYRWGYRNPNSGPKADLEGFDIDLVHRI 132 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + I DP +Q+ + +R A+Q ++D++ R R + F + GQ Sbjct: 133 AQDILGDPKAVQFKAIPTNQRIPAIQKGRVDMVVRTMTINCKRLADVA--FSAPYFKTGQ 190 Query: 128 GFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHN---MKYHPIVFERVEEID 183 + K I L+ IC G+T L + +A + Sbjct: 191 QVLAPKSSDIKGYDGTLAHKKICTAEGSTAFSQLDEDKRAGKLVASADLRTTVPNQLDCL 250 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + DA D + + + + + A+ + V+ Sbjct: 251 VRLQLGEVDAVVTDGALAASQAAQDP---TVELKGSPFTTEYYGVAMKSDADDLVRRVNQ 307 Query: 244 TH 245 Sbjct: 308 VL 309 >gi|283784627|ref|YP_003364492.1| arginine ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] gi|282948081|emb|CBG87646.1| arginine ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] Length = 243 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 83/250 (33%), Gaps = 25/250 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + ++ + G++ F + A+ GFD Sbjct: 1 MKKLVLAALLASFAVGASAAE-------------KISFGVSATYPPFESLDASNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + AL+ K+ D + D T R + F Sbjct: 48 LDLAKALCKQM---QAECTFTNHAFDSLIPALKFKKYDAVISGMDITPERSKQVA--FTN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++ KK + + L G I ++ GTT + L D + ++ + Sbjct: 103 PY-YANSALVIAKKDAYKTFADLKGKRIGMENGTTHQKYLHDKHPE----VQTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + TN + + + + L A+ + Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPQLGAATEKVTDPQYFGTGLGIAVRPDNKALL 217 Query: 239 NIVSWTHYAM 248 ++ A+ Sbjct: 218 EKLNSALAAI 227 >gi|222032592|emb|CAP75331.1| Arginine-binding periplasmic protein 1 [Escherichia coli LF82] gi|312945380|gb|ADR26207.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily protein [Escherichia coli O83:H1 str. NRG 857C] Length = 243 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 86/249 (34%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++I+ + D T RE + F Sbjct: 48 VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRIEAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D+ GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTH 245 ++ Sbjct: 216 LQQKLNTAL 224 >gi|187924056|ref|YP_001895698.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] gi|187715250|gb|ACD16474.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 262 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 86/253 (33%), Gaps = 17/253 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +S+ L + + +A + L+ GI F G +GFD Sbjct: 1 MLQKLSLSVFVAAALLGSVGTVSAET------QNTLRFGIEAAYPPFESKSPTGQLEGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + + +++ ALQ+++ D ++ + T R+ ++ RP Sbjct: 55 VDVGNAVCAKMGVK---CEWVENAFDGLIPALQARKFDAINSAMNITDKRKQTIAFT-RP 110 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I + V L G + V ++ E L ++ + + + + Sbjct: 111 IYVVPIVMVAKRSSGLLPDVKSLQGKRVGVLQASSQEDFLKRHWANAGVS--IVSYADQD 168 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDT 235 ++ A A R DA + + L ++ I +S + +GD Sbjct: 169 QVYADLVAGRLDAAVQEAQTVQDGFLNKPAGHDYAIAGQPLSDPATLGEGTGFGLRKGDR 228 Query: 236 EWYNIVSWTHYAM 248 + A+ Sbjct: 229 ALAGKIDAALDAL 241 >gi|294791749|ref|ZP_06756897.1| glutamine ABC transporter, glutamine-binding protein [Veillonella sp. 6_1_27] gi|294793610|ref|ZP_06758747.1| glutamine ABC transporter, glutamine-binding protein [Veillonella sp. 3_1_44] gi|294455180|gb|EFG23552.1| glutamine ABC transporter, glutamine-binding protein [Veillonella sp. 3_1_44] gi|294456979|gb|EFG25341.1| glutamine ABC transporter, glutamine-binding protein [Veillonella sp. 6_1_27] Length = 268 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 77/258 (29%), Gaps = 22/258 (8%) Query: 2 YKDFFVS--ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKG 58 K ++ L S+N L G N V F + G Sbjct: 7 KKIILGGCMLVMAASLVGGCGSSNQPT------SNKLVVGTNATFVPFEFKDEKTQDYTG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD++ RA+ I D ++ + AL + ID+ + T R S + F Sbjct: 61 FDIELIRAIGKRINKD---VELKNVAFDALIPALNTHDIDVAASGMTITKAR--SEKVLF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + + ++S+ L G I Q GTT F+ Sbjct: 116 SSPYYENALAVVYKDGTAVNSLDDLKGKKIAAQLGTTGADLAHKI-----EGTTVKEFDH 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEW 237 E + DA D+ A + P +H + +K L AI + + Sbjct: 171 SNEALLELQNSGVDATVIDLP--VAQYYSTKHPDQHIKFMAYPNTKEYLGLAINKDNKAL 228 Query: 238 YNIVSWTHYAMVTAEELG 255 ++ M E Sbjct: 229 QEEINKAIADMKADGEFN 246 >gi|320175300|gb|EFW50406.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Shigella dysenteriae CDC 74-1112] Length = 243 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ + G++ F + AN + GFD Sbjct: 1 MKKLVLAALLASFTFGASAAE-------------KINFGVSATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S ++F Sbjct: 48 IDLAKALCKQM---QAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPER--SKQVSFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + L G I ++ GTT + + D + ++ + Sbjct: 103 PYYENSAVVIAKK-DTYKTFANLKGKRIGMENGTTHQKYIQDQHPE----VKTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P V + L A+ + Sbjct: 158 NAFIDLKNGRIDGVFGDTAVVNEWL--KTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNNALAAI 227 >gi|238760845|ref|ZP_04621942.1| Arginine-binding periplasmic protein 2 [Yersinia aldovae ATCC 35236] gi|238700937|gb|EEP93557.1| Arginine-binding periplasmic protein 2 [Yersinia aldovae ATCC 35236] Length = 243 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 83/250 (33%), Gaps = 25/250 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + F++ + ++ + F + AN + GFD Sbjct: 1 MKKLLLATF--LSGMVFSATAAE-----------TIRFAASATYPPFEFMDANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + AL+ K+ D + D T R S + F Sbjct: 48 MDLAKALCKQM---DANCTFTNQAFDSLIPALKFKRYDAVISGMDITPER--SKQVTFTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K SS + L G I ++ GTT + L D + ++ + Sbjct: 103 PYYANSAIVIAPKG-KFSSFADLKGKKIGMENGTTHQKYLQDLHPE----IKTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + TN + + L A+ ++ Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPDLASVGKHVTDPQYFGTGLGIAVRPDNSALL 217 Query: 239 NIVSWTHYAM 248 ++ A+ Sbjct: 218 EKLNKAIDAI 227 >gi|253700905|ref|YP_003022094.1| extracellular solute-binding protein family 3 [Geobacter sp. M21] gi|251775755|gb|ACT18336.1| extracellular solute-binding protein family 3 [Geobacter sp. M21] Length = 248 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 77/250 (30%), Gaps = 20/250 (8%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M ++++ L F S + A + + V AN GF Sbjct: 1 MKAIRIMLAVVAFAGLCFASAALAAP--------KTVTVATDATWPPMEFVDANKKIVGF 52 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+DF A++ + F + + Q D + + T R+ F Sbjct: 53 DIDFMNAVAKEAGFQA---SFKNTAWDGIFAGIAAGQYDAIISSVTITNERKA--KFDFT 107 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 GQ ++ K + + ++ L G I Q GTT + + ++ V Sbjct: 108 VPYISIGQILVVPKAEKGTKIADLKGKKIGAQIGTTGAMEIKKVA-----GVELKTYDEV 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 A R D L + + I+ +K + +G+ E Sbjct: 163 GLAFEDMAAGRISGVVCDQPTAVTYALDKKEYNKKFKIVGQPFTKEAYGIVVKKGNKELV 222 Query: 239 NIVSWTHYAM 248 +++ A+ Sbjct: 223 ALLNKGIAAV 232 >gi|161613484|ref|YP_001587449.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161362848|gb|ABX66616.1| hypothetical protein SPAB_01201 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 244 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 46/226 (20%), Positives = 78/226 (34%), Gaps = 13/226 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + +L +K+RG L G+ F+ +G GF+VDF AL+ + Sbjct: 7 ADEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFEVDFAEALAKHLGVKAL---LK 63 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISS 139 P +L +K+ID++ + +R+ F G ++ K I + Sbjct: 64 PTKWDGILASLDAKRIDVVINQVTISDVRKK--KYDFSTPYTVSGVQALVKKGNEGTIKT 121 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G + V GT E L + ++ R R DA D Sbjct: 122 AADLQGKKVGVGLGTNYEEWLRQHV----QGVDIRTYDDDPTKYQDLRVGRIDAILVDR- 176 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L AL L + D S+ A+ +G+ + V Sbjct: 177 -LAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAVDNAI 221 >gi|146306128|ref|YP_001186593.1| cationic amino acid ABC transporter, periplasmic binding protein [Pseudomonas mendocina ymp] gi|145574329|gb|ABP83861.1| L-ornithine-binding protein / L-arginine-binding protein [Pseudomonas mendocina ymp] Length = 258 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 79/254 (31%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L + + + L+ GI FA A+G GFD Sbjct: 1 MNKIALFGALALSTFGTFAVAAEPA----------LRIGIEAAYPPFAFKTADGKIAGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D L + + K Q++ +L+ +++D + + T + + F Sbjct: 51 YDIGNELCAQM---QVKCQWVEQEFDGLIPSLKVRKVDAVLSSMSITE--DRLKSVDFSK 105 Query: 121 ITYFDGQGFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M + I S L G + VQ +T + + + + Sbjct: 106 KYYHTPGKLVMKEGSQIQDPSVDLKGKKVAVQRASTYDRYATAELTPAG--VNVVRYGSN 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 E A R DA D+ + L D ++ + A+ +GD Sbjct: 164 NEAFLDLLAGRVDAVLADVVNIDEGFLKTDGGKGFALVGPDFNDPRYFGRGAGIAVRKGD 223 Query: 235 TEWYNIVSWTHYAM 248 ++ A+ Sbjct: 224 AATAEKLNAAIDAI 237 >gi|16761280|ref|NP_456897.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141024|ref|NP_804366.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56412748|ref|YP_149823.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|167549640|ref|ZP_02343399.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168229730|ref|ZP_02654788.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194468551|ref|ZP_03074535.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197361682|ref|YP_002141318.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|213161135|ref|ZP_03346845.1| lysine-arginine-ornithine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213418062|ref|ZP_03351137.1| lysine-arginine-ornithine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213426989|ref|ZP_03359739.1| lysine-arginine-ornithine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213622202|ref|ZP_03374985.1| lysine-arginine-ornithine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213649622|ref|ZP_03379675.1| lysine-arginine-ornithine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213852677|ref|ZP_03382209.1| lysine-arginine-ornithine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289827476|ref|ZP_06546088.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25296356|pir||AI0800 lysine-arginine-ornithine-binding periplasmic protein precursor [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503579|emb|CAD07587.1| lysine-arginine-ornithine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi] gi|29136649|gb|AAO68215.1| lysine-arginine-ornithine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56127005|gb|AAV76511.1| lysine-arginine-ornithine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194454915|gb|EDX43754.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197093158|emb|CAR58602.1| lysine-arginine-ornithine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|205325477|gb|EDZ13316.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205335779|gb|EDZ22543.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 260 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 91/279 (32%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + + + ++ G +T F+ A GD+ GFD Sbjct: 1 MKKTVLALSLLIGLGATAASYAALPQ--------TVRIGTDTTYAPFSSKDAKGDFIGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I ++ L G + V G+T E D ++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + A R DA D A L E+ + + + D Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE EL ++++K + +V Sbjct: 226 TELKAAFDKALT------ELRQDGT-YDKMAKKYFDFNV 257 >gi|148545498|ref|YP_001265600.1| cystine transporter subunit [Pseudomonas putida F1] gi|148509556|gb|ABQ76416.1| extracellular solute-binding protein, family 3 [Pseudomonas putida F1] Length = 264 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 73/227 (32%), Gaps = 12/227 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + L I+++G + G+ F+ NG GF+V+ L+ + + Sbjct: 25 AFAGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKLTGFEVELSELLAKELGVKA---KI 81 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGIS 138 P AL+SK++D++ + R+ + + K + I Sbjct: 82 QPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSEPYTVSGIQALILKKKAEQLNIK 141 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G + V GT E + +E A R R DA D Sbjct: 142 GAQDLAGKKVGVGLGTNYEQWVKKDVPQA----DVRTYEDDPSKFADLRNGRIDAILIDR 197 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A + + D S+ A+ +G+ E ++ Sbjct: 198 LAALEYAQKAK---DTQLAGDAFSRLESGVALRKGEPELLAAINKAI 241 >gi|291616876|ref|YP_003519618.1| ArtI [Pantoea ananatis LMG 20103] gi|291151906|gb|ADD76490.1| ArtI [Pantoea ananatis LMG 20103] Length = 246 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 78/213 (36%), Gaps = 12/213 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ F V AN +GFDVD AL + + + +L+ Sbjct: 25 TIRIATEASYPPFEFVDANNKIQGFDVDLANALCKEM---DATCTFTNQAFDSLIPSLKF 81 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 ++ D + D T RE + F Y + F+ K ++SV L G + VQ GT Sbjct: 82 RRFDAVMAGMDITPEREK--QVLFSKPYYDNSAIFVAQKG-KVASVEALKGKRVGVQNGT 138 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PS 212 T + L D + + ++ + + R DA GD + + N + P Sbjct: 139 THQKYLTD----KHADITVVPYDSYQNAVLDLKNGRIDAVFGDSAVVNEWLKQNAKLAPV 194 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + L A+ QG+TE + + Sbjct: 195 GEKVTDKAYFGTGLGIAVRQGNTELQSKFNTAL 227 >gi|254702999|ref|ZP_05164827.1| extracellular solute-binding protein [Brucella suis bv. 3 str. 686] Length = 251 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 42/243 (17%), Positives = 80/243 (32%), Gaps = 15/243 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + +++ A K+ ++ F + +G GFD+D Sbjct: 1 MAGLASVVLTVSIQAPVQA------KEWKEIRIASEGAYPPFNYMSPDGKLVGFDLDIAN 54 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL A+ +K + + +LQ+ + D + + T R+ + F Y Sbjct: 55 ALCEAM---EAKCTIVANDWDGMIPSLQANKFDAVIASMAITDERKKQVA--FTDRYYTT 109 Query: 126 GQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 ++ K I S S +G + QAGTT D + ++ +E + Sbjct: 110 PLAVVVPKDSDIVSLEPSAFAGKMVGAQAGTTQGNYADDVYGKAGAD--VKLYPTADEAN 167 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A + R DA D + S++ +A A+ QGD + + Sbjct: 168 ADLESGRLDALAADKFIAADWLKKQGADCCKFLGDIPGSETQIAVALRQGDDDLREQFNA 227 Query: 244 THY 246 Sbjct: 228 AIK 230 >gi|21223627|ref|NP_629406.1| secreted protein [Streptomyces coelicolor A3(2)] gi|256785262|ref|ZP_05523693.1| secreted protein [Streptomyces lividans TK24] gi|289769153|ref|ZP_06528531.1| secreted protein [Streptomyces lividans TK24] gi|9968710|emb|CAC05959.1| secreted protein [Streptomyces coelicolor A3(2)] gi|289699352|gb|EFD66781.1| secreted protein [Streptomyces lividans TK24] Length = 320 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 84/254 (33%), Gaps = 19/254 (7%) Query: 17 FTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + A L I+ +G +K G + +G G D D AL + Sbjct: 49 SAGGAPLADKLPQSIRDKGTIKVGSDIAYAPVEFKDDSGKTVGIDPDLADALGKQLGVK- 107 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI----------SLGLAFRPITYFD 125 ++ L+SK+ DI T R+ G+ F + Sbjct: 108 --FEFENGTFDTLITGLRSKRYDIAMSAMTDTKDRQEGIDGDTGKKVGQGVDFVD-YFTA 164 Query: 126 GQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPIVFERVEE 181 G K +GI + S L G + VQ GT +E + K F+ ++ Sbjct: 165 GVSIYTKKGDDQGIKTWSDLCGKKLVVQRGTVSEDLAKAENEKCPAGKKISMQPFDNDQQ 224 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 RA DA + D T+ + ++ + + +P A+ + +T+ + + Sbjct: 225 AQTRLRAGGADAGSSDFPVAAYAVKTSGGGKDFELVGEQVEAAPYGIAVAKDNTQLRDAL 284 Query: 242 SWTHYAMVTAEELG 255 A++ E Sbjct: 285 KAALDAVIANGEYK 298 >gi|15800618|ref|NP_286632.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 EDL933] gi|15830200|ref|NP_308973.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 str. Sakai] gi|168750052|ref|ZP_02775074.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4113] gi|168756662|ref|ZP_02781669.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4401] gi|168763282|ref|ZP_02788289.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4501] gi|168767378|ref|ZP_02792385.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4486] gi|168776409|ref|ZP_02801416.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4196] gi|168779420|ref|ZP_02804427.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4076] gi|168787089|ref|ZP_02812096.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC869] gi|168799850|ref|ZP_02824857.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC508] gi|195936912|ref|ZP_03082294.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 str. EC4024] gi|208808622|ref|ZP_03250959.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4206] gi|208816255|ref|ZP_03257434.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4045] gi|208822439|ref|ZP_03262758.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4042] gi|209397117|ref|YP_002269536.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4115] gi|217324500|ref|ZP_03440584.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. TW14588] gi|254792062|ref|YP_003076899.1| arginine ABC transporter periplasmic-binding protein [Escherichia coli O157:H7 str. TW14359] gi|261225517|ref|ZP_05939798.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261258514|ref|ZP_05951047.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK966] gi|291281865|ref|YP_003498683.1| Arginine ABC transporter periplasmic arginine-binding protein ArtI [Escherichia coli O55:H7 str. CB9615] gi|12513884|gb|AAG55242.1|AE005267_7 arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 str. EDL933] gi|13360405|dbj|BAB34369.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli O157:H7 str. Sakai] gi|187768202|gb|EDU32046.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4196] gi|188015722|gb|EDU53844.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4113] gi|189002776|gb|EDU71762.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4076] gi|189356239|gb|EDU74658.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4401] gi|189363375|gb|EDU81794.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4486] gi|189366498|gb|EDU84914.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4501] gi|189373113|gb|EDU91529.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC869] gi|189377781|gb|EDU96197.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC508] gi|208728423|gb|EDZ78024.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4206] gi|208732903|gb|EDZ81591.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4045] gi|208737924|gb|EDZ85607.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4042] gi|209158517|gb|ACI35950.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC4115] gi|209775298|gb|ACI85961.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli] gi|209775300|gb|ACI85962.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli] gi|209775302|gb|ACI85963.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli] gi|209775304|gb|ACI85964.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli] gi|209775306|gb|ACI85965.1| arginine 3rd transport system periplasmic binding protein [Escherichia coli] gi|217320721|gb|EEC29145.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. TW14588] gi|254591462|gb|ACT70823.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|290761738|gb|ADD55699.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O55:H7 str. CB9615] gi|320192652|gb|EFW67293.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. EC1212] gi|320637733|gb|EFX07525.1| putative ABC transporter arginine-biding protein [Escherichia coli O157:H7 str. G5101] gi|320642856|gb|EFX12057.1| putative ABC transporter arginine-biding protein [Escherichia coli O157:H- str. 493-89] gi|320648313|gb|EFX16968.1| putative ABC transporter arginine-biding protein [Escherichia coli O157:H- str. H 2687] gi|320654151|gb|EFX22219.1| putative ABC transporter arginine-biding protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659775|gb|EFX27331.1| putative ABC transporter arginine-biding protein [Escherichia coli O55:H7 str. USDA 5905] gi|320664245|gb|EFX31396.1| putative ABC transporter arginine-biding protein [Escherichia coli O157:H7 str. LSU-61] gi|326338243|gb|EGD62072.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. 1125] gi|326346220|gb|EGD69958.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli O157:H7 str. 1044] Length = 243 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 86/249 (34%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + F Sbjct: 48 VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITAEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D+ GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTH 245 ++ Sbjct: 216 LQQKLNTAL 224 >gi|312961851|ref|ZP_07776349.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] gi|311284110|gb|EFQ62693.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] Length = 259 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 86/249 (34%), Gaps = 17/249 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 S+ ++L + + +A +I + G+ F V A+G +GFD++ Sbjct: 4 LRSLFAALLLPLCATAAHAQEWKEI------RFGVFPEYPPFESVAADGSLQGFDIELGN 57 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A+ + + K ++ AL++++ D + + T RE + F + Sbjct: 58 AICAKL---EVKCTWVHNEFDGMIPALRARKFDAIMSSMAVTPAREK--QIDFTDRLFLS 112 Query: 126 GQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 I K + L G + V G+ E + ++ ++ A Sbjct: 113 PTSVITRKGADFGDTPESLKGKQVGVLQGSLQEAYARAHLAKLG--AQVKAYQSQDQNYA 170 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILP---DIISKSPLAPAIIQGDTEWYNIV 241 + R DA D L+ ++ P D +A + + D E +++ Sbjct: 171 DLQNGRLDATLTDKLEAQLNFLSKPEGADFKTGPAFKDPTLPLDIAMGLRKNDQELRDLI 230 Query: 242 SWTHYAMVT 250 + A+ Sbjct: 231 NKGIAAVQA 239 >gi|271501285|ref|YP_003334310.1| cationic amino acid ABC transporter periplasmic-binding protein [Dickeya dadantii Ech586] gi|270344840|gb|ACZ77605.1| cationic amino acid ABC transporter, periplasmic binding protein [Dickeya dadantii Ech586] Length = 259 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 85/250 (34%), Gaps = 22/250 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L+ F + S A + +IK G + F A+G GFD Sbjct: 1 MKKMLKLLPLALV---FAAGSAFAEVPKNIK------IGTDPTYAPFESKDASGQLVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + L I + ++ + +L++K+ID + + T R +AF Sbjct: 52 IDLAKDLCQRI---KANCTFVESDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFTD 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V +T E Y++ + + ++ Sbjct: 107 KLYAANARLIAKKGSPIVPALDALKGKRVGVLQASTQEAYANQYWQPKGVD--VVAYQNQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I A + R DA D A L ++ + L + + + Sbjct: 165 DLIYADLTSGRIDAAFQDEVAGSEGFLKQAAGKDYAFAGPAVKDDKLFGVGTGMGLRKDE 224 Query: 235 TEWYNIVSWT 244 T+ + Sbjct: 225 TDLKVALDKA 234 >gi|15672545|ref|NP_266719.1| glutamate or arginine ABC transporter substrate binding protein [Lactococcus lactis subsp. lactis Il1403] gi|12723450|gb|AAK04661.1|AE006290_6 glutamate or arginine ABC transporter substrate binding protein [Lactococcus lactis subsp. lactis Il1403] gi|326406064|gb|ADZ63135.1| glutamate or arginine ABC transporter substrate binding protein [Lactococcus lactis subsp. lactis CV56] Length = 269 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 80/272 (29%), Gaps = 25/272 (9%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 M K + + + + + + +KK G LK ++ F Sbjct: 1 MKKLALGMVGLAAVATLAACGNGKSATNQVDKVKKAGVLKVALSPDYPPFEFQIIKDGKN 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G DVD A+ + ++ ++ +L + + DI RE Sbjct: 61 TVVGSDVDLANAIGKKLGVK---VKIESMDFNNVLASLNTGKADIAISGISKEPSREK-- 115 Query: 115 GLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F + Y ++ K SV G + Q G+T E + FK Sbjct: 116 SVNFSDVYYTASNYLVVKKSDLSKYRSVDDFKGKKVAAQKGSTQEGIVTSQFK----GAT 171 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA--PAI 230 I ++ + + + + + N + K A+ Sbjct: 172 EIALPQIGDEINEVKGGQVQGAVIENLIAKSYVAANSD-LAIANVDVKTPKDSYGSAVAL 230 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 +G E +V+ EEL Q N + Sbjct: 231 PKGSDELTKVVNSVIK-----EELKNGQINKD 257 >gi|159026759|emb|CAO86640.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 276 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 86/254 (33%), Gaps = 15/254 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58 M K+F++ L L+++ S A L I + G LK F+ + G W G Sbjct: 1 MSKNFWLIFLGLLLINNLHLSVLAETVLQRIARTGELKAAARKDATPFSYIDEKTGQWTG 60 Query: 59 FDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + V+ R + + P I + RF ++ Q+ + T R Sbjct: 61 YGVELMRLVQRRLAQELGKPITITFTEATTNNRFQQVEQGQVYLSCNTATITEER--LEK 118 Query: 116 LAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + G F+ ++ I + L+ +I TTT+ + + N + Sbjct: 119 VNFSTPYFMTGAQFLTKRENVDKIDINNTLAAVAIAYIPHTTTDSIIRYIYPLANWQ--- 175 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILP-DIISKSPLAPAII 231 E A + A D L + P + V+LP I+ + Sbjct: 176 -AVSDRSEAVAKLQRGEVKAVVSDGILLLGELVKQGQDPRQFVLLPSQPITTELYGCILP 234 Query: 232 QGDTEWYNIVSWTH 245 + D EW V Sbjct: 235 KNDPEWKKFVDTVV 248 >gi|301052510|ref|YP_003790721.1| amino acid ABC transporter amino acid-binding protein [Bacillus anthracis CI] gi|300374679|gb|ADK03583.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus biovar anthracis str. CI] Length = 265 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 35/254 (13%), Positives = 75/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELSEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + E + + R D D ++ T ++ + + Sbjct: 170 EIVGVEGFIQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G T+ V Sbjct: 229 KGSTKLVQEVDKAL 242 >gi|15966715|ref|NP_387068.1| putative amino acid-binding periplasmic ABC transporter protein [Sinorhizobium meliloti 1021] gi|307300250|ref|ZP_07580030.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] gi|307321127|ref|ZP_07600531.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] gi|15075987|emb|CAC47541.1| Putative DL-2-aminoadipic acid ABC transporter, periplasmic solute-binding component [Sinorhizobium meliloti 1021] gi|306893202|gb|EFN23984.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] gi|306904416|gb|EFN35000.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] Length = 275 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 84/262 (32%), Gaps = 22/262 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F + + L F + + L + + + N+G + + + + GFD Sbjct: 1 MKGLFAKLAIGVAALAFVTAAQAGETLDRVMGKKAMVVATNSGWPPQSYLDDSNELVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + + + + + + D+ + T R + + F Sbjct: 61 IDVSKEIAKRLGVE---VSFETPDWATLTGGRWQGRYDLGVGSVTPTKAR--AQVIDFAG 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF---- 176 I YF +++HK SV+ L+G I V+ TT+E + + PI + Sbjct: 116 IYYFSPYVYVLHKDSQAKSVADLNGKIIGVETATTSEDFIRRQLEIDAPGLPPIEYKIEP 175 Query: 177 ---ERVEEI---DAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPL 226 + R R DA +L + + PL Sbjct: 176 GEIRTFADSMLPFDDLRLGDGVRLDAVIAPE---QTALNAVKNGYPLRVLEGEYAFREPL 232 Query: 227 APAIIQGDTEWYNIVSWTHYAM 248 + D +W V M Sbjct: 233 VVIAEKVDPDWTKKVGSIIDEM 254 >gi|254502159|ref|ZP_05114310.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia alexandrii DFL-11] gi|222438230|gb|EEE44909.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia alexandrii DFL-11] Length = 253 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 80/234 (34%), Gaps = 15/234 (6%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 K ++ G F + A+G GFD+D AL + + +++ + Sbjct: 15 ATAKDWSKVRIGTEGAYPPFNSLTADGQLVGFDIDIANALCEEMKVE---CEFVTQDWDG 71 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSG 145 ALQ+ + D + + T R+ + F Y + K ++ + LSG Sbjct: 72 MIPALQAGKYDAIIASMSITEERK--QKVDFTNKYYNTPPSIGVPKDTKLTGVTKEDLSG 129 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + Q+ TT +F ++ +E R DA D+ L Sbjct: 130 ILLGAQSSTTHSNYAEAHFP----DAELKLYPTADEYKLDLENGRIDAVIEDVVVLSDWL 185 Query: 206 LTNDRPSEHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 T++ V +I+ A+ +G+ E + + A++ + Sbjct: 186 ATDNGACCKVLSTLKSDPVINGEGAGIALRKGEDELKDKFNAAIEAILANGKYK 239 >gi|296532448|ref|ZP_06895172.1| ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] gi|296267223|gb|EFH13124.1| ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] Length = 299 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 57/277 (20%), Positives = 106/277 (38%), Gaps = 20/277 (7%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S S L IK RG L G + + A+G +G D+D R L+ ++FDDP+K+++ Sbjct: 42 SAGRSRLQMIKDRGRLIVGTGSTNPPWHFEGADGKLQGMDIDLARLLAKSLFDDPNKVEF 101 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + R +L + ++DI+ + T R + + F Y +G ++ + Sbjct: 102 VLQGSDARIPSLITDKVDIVVQWMTVTPGR--AQQVEFTIPYYREGVTLLLLARGAKYQN 159 Query: 141 SQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + A V G + + ++ + + FE + + A A R DAY D S Sbjct: 160 YDAMKAAGNAVTVGGMQNVFMEEWVRKALPQAKVDAFESPDAVLQALNARRIDAYMADQS 219 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 A L P V + A A+ GD W N V+ + + + Sbjct: 220 --AARWLMQQTPGRFVDAGYGWMPNSYASAVKPGDPVWLNWVNTVYKEAMMGVDFDYFAA 277 Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296 + +++ GI+ +G ++ Sbjct: 278 SY------------KKWFGIELP---TPKIGYPNEFA 299 >gi|262041040|ref|ZP_06014259.1| arginine ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041598|gb|EEW42650.1| arginine ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 250 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 83/249 (33%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + L ++ ++ F V AN GFD Sbjct: 8 MKKVLIAALLAGMSLSASAAQ-------------TIRFATEASYPPFELVDANNQIVGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + L+ ++ D + D T RE + F Sbjct: 55 VDLANALCKEI---DATCTFTNQAFDSLIPGLKFRRFDAVMAGMDITPEREK--QVLFST 109 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +S+ QL G + VQ GTT + + D + ++ + Sbjct: 110 PYYNNSALFVGQQG-KFTSIDQLKGKKVGVQNGTTHQKFITDKHPE----ITTVPYDSYQ 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R DA GD + + P + + K+ L A+ QG+T+ Sbjct: 165 NAKLDLQNGRIDAVFGDTAVVTEWL--KSNPKLAAVGDKVTDKAYFGTGLGIAVRQGNTD 222 Query: 237 WYNIVSWTH 245 + Sbjct: 223 LQQKFNAAL 231 >gi|229543205|ref|ZP_04432265.1| extracellular solute-binding protein family 3 [Bacillus coagulans 36D1] gi|229327625|gb|EEN93300.1| extracellular solute-binding protein family 3 [Bacillus coagulans 36D1] Length = 265 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 79/258 (30%), Gaps = 23/258 (8%) Query: 1 MYKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M K + ++L T+ S + + G IK +G L G F+ Sbjct: 1 MRKYIKWLAVFCLLLALTACGKNTDNQNASKSNDLYGQIKSKGVLLIGTEGTYPPFSFH- 59 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 NG G+D+D + ++ + + F L SK+ D+++ + Sbjct: 60 KNGKLTGYDIDVAKEVAKRLGLKAE---FKETQWDAMFAGLNSKRFDMIANQVGI--RAD 114 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 F ++ K I S + L G Q+ T+ T+A A+ Sbjct: 115 RQKKYDFSTPYTISKAVVLVRKDNTNIKSFADLKGKKSA-QSLTSNFATIAKKNGAN--- 170 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + E + ++R DA D K + S A Sbjct: 171 --IVSVEGFNQAIQLLTSNRVDATVNDSLTYLDYKKQKPNA-AIKVAATANDASKSALLF 227 Query: 231 IQGDTEWYNIVSWTHYAM 248 + + + V+ M Sbjct: 228 RKHSGKLTDKVNDALKDM 245 >gi|312142891|ref|YP_003994337.1| extracellular solute-binding protein family 3 [Halanaerobium sp. 'sapolanicus'] gi|311903542|gb|ADQ13983.1| extracellular solute-binding protein family 3 [Halanaerobium sp. 'sapolanicus'] Length = 244 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 85/243 (34%), Gaps = 21/243 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + +F SFS A G + G F V +G+ GFD Sbjct: 1 MKK-ILVLMLLVFAVFAFSFSAYAETY---------VVGTSAGFPPFEYV-EDGEIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + +++ ++ AL + IDI++ T R L F Sbjct: 50 MDLITEIGNRQGFE---VEFRDISFDSLIPALTTGSIDIIAAAMTITEERAEV--LDFSD 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179 Y Q ++H+ I VQ GTT ++ + D+ + + ++ Sbjct: 105 PYYSANQAVLVHEDSEEGLTILFGDNDIGVQTGTTGDIWVQDHLVEPGILTGNVRNYDSF 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + D D + P ++ +II+ A+ QG+ E Sbjct: 165 VLVIRDLANQNIDGVVLDKP--VGETYSQGNPV--KVVAEIITGEEYGMAVAQGNDELLE 220 Query: 240 IVS 242 ++ Sbjct: 221 KIN 223 >gi|300811418|ref|ZP_07091914.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497653|gb|EFK32679.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 279 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 77/236 (32%), Gaps = 16/236 (6%) Query: 18 TSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 ++ + + + +K + G+ F +GF++D R L+ I Sbjct: 24 SACAVESDNSVRVYNHVKSSKTITWGVKFDTALFGIKSVKTNKLEGFEIDLARLLTKEIL 83 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 K +++ + A+ + L++ +D + T R+ + F + G + Sbjct: 84 GKDGKAKFIEVTAQTKIPQLKNNNLDAVLATMTITDERKK--SVDFSTPYFKAGTSLMTK 141 Query: 133 KKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 I S+ L+ G V GTT +A + A A + Sbjct: 142 TSSPIKSIKDLNHKGRVAIVVKGTTAADDIARLAPKAK----IRQYNDYGACTNALLAGQ 197 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 DA D L + ++ ++ P A+ +G T+ ++ Sbjct: 198 GDAVATDNGILAGIADQQK---SLHLVGGTVAVEPYGIAVEKGQTKMLEAINKALK 250 >gi|149201666|ref|ZP_01878640.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. TM1035] gi|149144714|gb|EDM32743.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Roseovarius sp. TM1035] Length = 269 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 89/229 (38%), Gaps = 11/229 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + + + L ++ TS + A L DIK G + G+ + + ++G+ +G ++D Sbjct: 2 RTYIKAALTAVVATLTSTAAMADALQDIKDAGKIVVGVKQDYKPWGYLTSDGELQGLEID 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + ++ + + ++ +P+ A R LQ +I+++ R +G+ Sbjct: 62 LAKDVAERLGVE---VELVPVVASNRMEFLQQGRINLIIATMGDNEQRRQVIGMIEPNYY 118 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 K G+ + L GA +C G+ + + + + F + E Sbjct: 119 AGGTNVLA-PKAAGLKNWEDLKGADVCALQGSYYNKRVTQLYGPN-----LVAFAGIPEA 172 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 AA C A+ D + + + ++ + +E + P A +I Sbjct: 173 TAALLNGSCIAFLYDNTWIESQLASDAQWAEFEMPFPTE--DPQAWSIA 219 >gi|17988946|ref|NP_541579.1| cystine-binding periplasmic protein precursor [Brucella melitensis bv. 1 str. 16M] gi|225686456|ref|YP_002734428.1| family 3 extracellular solute-binding protein [Brucella melitensis ATCC 23457] gi|256043564|ref|ZP_05446491.1| extracellular solute-binding protein family 3 [Brucella melitensis bv. 1 str. Rev.1] gi|256262404|ref|ZP_05464936.1| solute-binding protein/glutamate receptor [Brucella melitensis bv. 2 str. 63/9] gi|260564758|ref|ZP_05835243.1| solute-binding protein/glutamate receptor [Brucella melitensis bv. 1 str. 16M] gi|265989982|ref|ZP_06102539.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella melitensis bv. 1 str. Rev.1] gi|17984779|gb|AAL53843.1| cystine-binding periplasmic protein precursor [Brucella melitensis bv. 1 str. 16M] gi|225642561|gb|ACO02474.1| extracellular solute-binding protein family 3 [Brucella melitensis ATCC 23457] gi|260152401|gb|EEW87494.1| solute-binding protein/glutamate receptor [Brucella melitensis bv. 1 str. 16M] gi|263000651|gb|EEZ13341.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella melitensis bv. 1 str. Rev.1] gi|263092137|gb|EEZ16434.1| solute-binding protein/glutamate receptor [Brucella melitensis bv. 2 str. 63/9] gi|326410834|gb|ADZ67898.1| family 3 extracellular solute-binding protein [Brucella melitensis M28] gi|326554125|gb|ADZ88764.1| family 3 extracellular solute-binding protein [Brucella melitensis M5-90] Length = 257 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 73/246 (29%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ +I + + L IK G LK G F + GFD Sbjct: 1 MKFAQILATAGIIQAVLFTGAMAGENLDAIKSAGVLKIGTEGTYAPFTYHDKDNKLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A++ + P ++ L + + D + T R+ F Sbjct: 61 VEIGEAIAGKLGVKPE---FVEGKWDGLIAGLDANRYDAVINQVGITEERKK--KFNFSN 115 Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + K I + L G Q+ T+ LA A + + Sbjct: 116 PYIVSKVVLIVNDKNDTIKDFADLKGKK-AAQSLTSNYGRLAKEAGAK-----LVATDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ R R DA D + + + ++ + + + +GD E Sbjct: 170 DQSIQLVRTGRADATLNDSLSYLDFRKHQPKAPV-KVVAEKDEATASGIIVRKGDDELVA 228 Query: 240 IVSWTH 245 ++ Sbjct: 229 AINKAL 234 >gi|26986970|ref|NP_742395.1| cystine transporter subunit [Pseudomonas putida KT2440] gi|24981584|gb|AAN65859.1|AE016214_4 cysteine ABC transporter, periplasmic cysteine-binding protein, putative [Pseudomonas putida KT2440] Length = 264 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 73/227 (32%), Gaps = 12/227 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + L I+++G + G+ F+ NG GF+V+ L+ + + Sbjct: 25 AFAGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKLTGFEVELSELLAKELGVKA---KI 81 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGIS 138 P AL+SK++D++ + R+ + + K + I Sbjct: 82 QPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSEPYTVSGIQALILKKKAEQLNIK 141 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L+G + V GT E + +E A R R DA D Sbjct: 142 GAQDLAGKKVGVGLGTNYEQWVKKDVPQA----DVRTYEDDPSKFADLRNGRIDAILIDR 197 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A + + D S+ A+ +G+ E ++ Sbjct: 198 LAALEYAQKAK---DTELAGDAFSRLESGVALRKGEPELLAAINKAI 241 >gi|222087274|ref|YP_002545809.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221724722|gb|ACM27878.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 296 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 99/264 (37%), Gaps = 18/264 (6%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + + L + + A L I ++G ++ G T V F+ K +G+ G+ +D C Sbjct: 9 LVLAGLALGVAAHVAAAAQTLDLIARKGTIRIGYITDEVPFSFKKKDGNPAGYTIDLCGK 68 Query: 67 LSSAIFDDPSKI--QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ A+ ++ Y+ + + F A++S QID+L L R + F + Sbjct: 69 IADAVARKLPQVKRDYVEITLADGFDAVKSNQIDLLCGAVTINLGR--RDSVDFSQPIFL 126 Query: 125 DGQGFIMHKKKGISSVSQLSGAS--------------ICVQAGTTTELTLADYFKAHNMK 170 G ++ K I V+A TTT TL + + Sbjct: 127 TGASALLRKDSPEYLQILFLDKRPTRATDRKSPSASIIGVRADTTTGATLREALGPDVPQ 186 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + F ++ A H+ DAY D + L +L PS I + + P A+ Sbjct: 187 TRVVDFSTHQDGLNALENHKIDAYFADRALLISLAAHARAPSTLAIGNRLFTHEPYGIAL 246 Query: 231 IQGDTEWYNIVSWTHYAMVTAEEL 254 + D+ + +V +++ Sbjct: 247 RRDDSTFRLLVDQALTEFYQSDDF 270 >gi|152969453|ref|YP_001334562.1| arginine 3rd transport system periplasmic binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893924|ref|YP_002918658.1| arginine 3rd transport system periplasmic binding component [Klebsiella pneumoniae NTUH-K2044] gi|288936334|ref|YP_003440393.1| cationic amino acid ABC transporter periplasmic binding protein [Klebsiella variicola At-22] gi|290510610|ref|ZP_06549980.1| arginine transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|329998471|ref|ZP_08303108.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Klebsiella sp. MS 92-3] gi|150954302|gb|ABR76332.1| arginine 3rd transport system periplasmic binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546240|dbj|BAH62591.1| arginine 3rd transport system periplasmic binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288891043|gb|ADC59361.1| cationic amino acid ABC transporter, periplasmic binding protein [Klebsiella variicola At-22] gi|289777326|gb|EFD85324.1| arginine transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|328538661|gb|EGF64757.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Klebsiella sp. MS 92-3] Length = 250 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 83/249 (33%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + L ++ ++ F V AN GFD Sbjct: 8 MKKVLIAALLAGMSLSASAAQ-------------TIRFATEASYPPFELVDANNQIVGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + L+ ++ D + D T RE + F Sbjct: 55 VDLANALCKEI---DATCTFTNQAFDSLIPGLKFRRFDAVMAGMDITPEREK--QVLFST 109 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +S+ QL G + VQ GTT + + D + ++ + Sbjct: 110 PYYDNSALFVGQQG-KFTSIDQLKGKKVGVQNGTTHQKFITDKHPE----ITTVPYDSYQ 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R DA GD + + P + + K+ L A+ QG+T+ Sbjct: 165 NAKLDLQNGRIDAVFGDTAVVTEWL--KSNPKLAAVGDKVTDKAYFGTGLGIAVRQGNTD 222 Query: 237 WYNIVSWTH 245 + Sbjct: 223 LQQKFNAAL 231 >gi|224476916|ref|YP_002634522.1| hypothetical protein Sca_1432 [Staphylococcus carnosus subsp. carnosus TM300] gi|222421523|emb|CAL28337.1| conserved hypothetical protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 491 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 16/212 (7%) Query: 5 FFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGF 59 +S + + + + +IKKRG LK G++ ++ G Sbjct: 16 LLLSFALVFGSLGSKVNAAVQDKTWEEIKKRGVLKVGLSADYAPLEFESHKNGKREYVGI 75 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + ++ + K++ + +N AL++ +ID++ T R+ + F Sbjct: 76 DIDIAKKIAKD---NGLKLEIVNMNFDSLLGALKTGKIDMIISGMTPTPERKK--EVDFS 130 Query: 120 PITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 GQ ++ K S+ + I Q TT E + + Sbjct: 131 DSYLKSGQTMVVKKTNIDKYKSLKDFANKRIGAQKQTTQEELAKNEIE----NADIQSMT 186 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 R+ E+ A ++ + D + A N Sbjct: 187 RLPEVIMALKSGKTDGAIIEGPVAEAYLQQNP 218 >gi|241889508|ref|ZP_04776807.1| arginine-binding extracellular protein ArtP [Gemella haemolysans ATCC 10379] gi|241863815|gb|EER68198.1| arginine-binding extracellular protein ArtP [Gemella haemolysans ATCC 10379] Length = 273 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 95/259 (36%), Gaps = 20/259 (7%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGD 55 M K F SI+ ++IL S S + L ++K++ + G++ + + N Sbjct: 1 MKKLVLFITSIITVVILTACSSSNTKNKLQEVKEKNKIVLGVSPDYPPYEFLTTENGNKK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G D+ ++ + +++ + AL + ++D++ + T R+ Sbjct: 61 VVGADIYLAEQVAKKLG---VQVEIQQMAFDSLIAALNANKVDMVISGVNPTEERKK--A 115 Query: 116 LAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F + Y F+++K I SV+ L I VQ G+T E + K + Sbjct: 116 VDFSDVYYTSKGIFVVNKDSEEIKSVADLKNKKIGVQKGSTYETYAKEQLKM--DDKNIQ 173 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAI 230 V + + + DA K+ ++ ++ I P +A Sbjct: 174 ALTDVPSLLQDLKNKKIDAVLIPDDV---AKIAMNKYTDIKISSFTADNDPEATGMAIVF 230 Query: 231 IQGDTEWYNIVSWTHYAMV 249 +G + + A++ Sbjct: 231 KKGKNDSNKELLEQVNAVI 249 >gi|228950911|ref|ZP_04113033.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228808759|gb|EEM55256.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 264 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 84/253 (33%), Gaps = 18/253 (7%) Query: 1 MYKDFFVSILCLII---LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + + + + + S +S ++ + ++ F + + Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESSTTSTNGEK-EFRYAMSGLYKPFNYKENDSKLV 59 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDV+ AL+ + + + + LQ+K+ D++ + T R ++ Sbjct: 60 GFDVEIGEALAKKMNMKATPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVS 114 Query: 118 FRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y G F+ K ISS L G I V +T + +A + Sbjct: 115 FSNPYYRSGAQIFVAKKNNAISSPEDLKGKKIGVVKASTFKNLVA------KYTDQITEY 168 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + R DA D + L++ + S ++ + AI + D E Sbjct: 169 DSDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKE 226 Query: 237 WYNIVSWTHYAMV 249 V+ ++ Sbjct: 227 MVEKVNKALDEII 239 >gi|254712479|ref|ZP_05174290.1| hypothetical protein BcetM6_03671 [Brucella ceti M644/93/1] gi|254715552|ref|ZP_05177363.1| hypothetical protein BcetM_03702 [Brucella ceti M13/05/1] gi|261217289|ref|ZP_05931570.1| extracellular solute-binding protein family 3 [Brucella ceti M13/05/1] gi|261320160|ref|ZP_05959357.1| extracellular solute-binding protein family 3 [Brucella ceti M644/93/1] gi|260922378|gb|EEX88946.1| extracellular solute-binding protein family 3 [Brucella ceti M13/05/1] gi|261292850|gb|EEX96346.1| extracellular solute-binding protein family 3 [Brucella ceti M644/93/1] Length = 257 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 71/246 (28%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ +I + + L IK G LK G F + GFD Sbjct: 1 MKFAQILATAGIIQAVLFTGAMAGENLDAIKSAGVLKIGTEGTYAPFTYHDKDNKLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A++ + P ++ L + D + T R+ F Sbjct: 61 VEIGEAIAGKLGVKPE---FVEGKWDGLIAGLDANDYDAVINQVGITEERKK--KFNFSN 115 Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + K I + L G Q+ T+ LA A + + Sbjct: 116 PYIVSKVVLIVNDKNDTIKDFADLKGKK-AAQSLTSNYSRLAKEAGAK-----LVATDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ R DA D + + + ++ + + + +GD E Sbjct: 170 DQSIQLVLTGRADATLNDSLSYLDFRKHQPKAPV-KVVAEKDEATASGIIVRKGDDELVA 228 Query: 240 IVSWTH 245 ++ Sbjct: 229 AINKAL 234 >gi|237802193|ref|ZP_04590654.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025050|gb|EGI05106.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 254 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 84/256 (32%), Gaps = 27/256 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 MYK + + S+L + +K GI F A+G GFD Sbjct: 3 MYKKILMIAAATLAFS-------GSVLAE-----KMKMGIEGAYPPFNNKDASGQVVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + AL + + + + + + AL +++ D L + T RE + F Sbjct: 51 REIGDALCAKMKVE---CEVVTSDWDGIIPALNAQKFDFLISSLSITKEREKM--VDFTT 105 Query: 121 ITYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 Y + F+ K I + L+G S+ Q T L D Sbjct: 106 PYYSNKLQFVAPKTSSIDVSSIEKAKESLTGKSVGAQRSTLASTWLEDTLG----IMDAK 161 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ E A R DA D A Y + + ++ + A+ +G+ Sbjct: 162 LYDTQENAFFDLVAGRMDAMLADKYASYEWLKSEAGQNFEFKGEPVVENDKIGIAVRKGN 221 Query: 235 TEWYNIVSWTHYAMVT 250 E ++ ++ Sbjct: 222 DELRERLNVALKEIIA 237 >gi|182418197|ref|ZP_02949497.1| amino acid ABC transporter, amino acid-binding protein [Clostridium butyricum 5521] gi|237666247|ref|ZP_04526234.1| extracellular solute-binding protein, family 3 [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378015|gb|EDT75555.1| amino acid ABC transporter, amino acid-binding protein [Clostridium butyricum 5521] gi|237658337|gb|EEP55890.1| extracellular solute-binding protein, family 3 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 272 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 84/241 (34%), Gaps = 16/241 (6%) Query: 12 LIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRAL 67 + ++ S L IK+ G L G + + V + KGFD+D +A+ Sbjct: 20 ISMVGCGSSGDENKTALDKIKESGKLVVGTSADYPPYEFHATVDGKDEIKGFDIDIAQAV 79 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + ++ ++ +ALQ ++D++ T R F I Y Sbjct: 80 ADDLGVK---LEIKDMDFDGLLVALQGDKVDMVFAGMTPTEER--KQNADFSDIYYTATH 134 Query: 128 GFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 FI+ + + S L I VQ G+ E D F A N +V ++ Sbjct: 135 RFILRSGEEGSVKSFDDLKDKKIGVQKGSIQEGIAKDNFDAAN----IKSLAKVTDLVLD 190 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + ++ DA + N+ + A A+ +G TE V+ T Sbjct: 191 LKNNKVDAILIEDGVAKINCDKNE-GIAMSDFVVTDEEGGSAIALKKGSTELQTEVNNTI 249 Query: 246 Y 246 Sbjct: 250 N 250 >gi|22126721|ref|NP_670144.1| arginine 3rd transport system periplasmic binding protein [Yersinia pestis KIM 10] gi|45441083|ref|NP_992622.1| arginine 3rd transport system periplasmic binding protein [Yersinia pestis biovar Microtus str. 91001] gi|229895773|ref|ZP_04510943.1| ABC transporter, periplasmic arginine-binding protein artI precursor [Yersinia pestis Pestoides A] gi|229903223|ref|ZP_04518336.1| ABC transporter, periplasmic arginine-binding protein artI precursor [Yersinia pestis Nepal516] gi|21959741|gb|AAM86395.1|AE013887_2 arginine 3rd transport system periplasmic binding protein [Yersinia pestis KIM 10] gi|45435942|gb|AAS61499.1| arginine 3rd transport system periplasmic binding protein [Yersinia pestis biovar Microtus str. 91001] gi|229678993|gb|EEO75096.1| ABC transporter, periplasmic arginine-binding protein artI precursor [Yersinia pestis Nepal516] gi|229700696|gb|EEO88725.1| ABC transporter, periplasmic arginine-binding protein artI precursor [Yersinia pestis Pestoides A] gi|320015810|gb|ADV99381.1| ABC transporter, periplasmic arginine-bindingprotein artI precursor [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 252 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 82/250 (32%), Gaps = 25/250 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L + F++ + L+ + F + AN + GFD Sbjct: 10 MKKLLLATL--LSGMAFSATAAE-----------TLRFAASATYPPFESMDANNEIVGFD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + AL+ K+ D + D T R + F Sbjct: 57 MDLAKALCKQM---EANCTFTNQAFDSLIPALKFKRYDAVISGMDITPERSKQVA--FTQ 111 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K S+ + L G I ++ GTT + L D + ++ + Sbjct: 112 PYYANSAIVIAPKG-KFSTFADLKGKKIGMENGTTHQKYLQDKHPE----IQTVSYDSYQ 166 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + TN + + L A+ + Sbjct: 167 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPNLASVGEHVTDPQYFGTGLGIAVRPDNIALL 226 Query: 239 NIVSWTHYAM 248 ++ A+ Sbjct: 227 TKLNKAIDAV 236 >gi|256015452|ref|YP_003105461.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella microti CCM 4915] gi|255998112|gb|ACU49799.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella microti CCM 4915] Length = 257 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 72/246 (29%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ +I + + L IK G LK G F + GFD Sbjct: 1 MKFAQILATAGIIQAVLFTGAMAGENLDAIKSAGVLKIGTEGTYAPFTYHDKDNKLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A++ + P ++ L + + D + T R+ F Sbjct: 61 VEIGEAIAGKLGVKPE---FVEGKWDGLIAGLDANRYDAVINQVGITEERKK--KFNFSN 115 Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + K I + L G Q+ T+ LA A + + Sbjct: 116 PYIVSKVVLIVNDKNDTIKDFADLKGKK-AAQSLTSNYGRLAKEAGAK-----LVATDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ R DA D + + + ++ + + + +GD E Sbjct: 170 DQSIQLVLTGRADATLNDSLSYLDFRKHQPKAPV-KVVAEKDEATASGIIVRKGDDELVA 228 Query: 240 IVSWTH 245 ++ Sbjct: 229 AINKAL 234 >gi|152976560|ref|YP_001376077.1| extracellular solute-binding protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025312|gb|ABS23082.1| extracellular solute-binding protein family 3 [Bacillus cytotoxicus NVH 391-98] Length = 261 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 95/263 (36%), Gaps = 12/263 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG--DIKKRGFLKCGINTGLVGFAEVKAN--GDW 56 M K +SI ++IL S + K + L G + + V+A+ + Sbjct: 1 MKKVLSISIALILILSMFSACSKGEEKEVGADKNKKVLIMGTSADYKPYEYVEASKSDEI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD + + + + ++ ++ +L S ++D + T R+ Sbjct: 61 IGFDVDIAKYIGKELGYE---VKVKDMDFGGLLASLSSGKVDFVMAGMTPTAERKE--NA 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F I + + K I S+ L G + VQ G+ E ++ K ++K Sbjct: 116 DFTDIYFVAKNMIVSKKDSNIKSLQDLKGKKVGVQTGSIQEEKANEFKKQVDLKAEGR-- 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 +RV EI +A R DA + + L + + + + + + A A+ + + Sbjct: 174 DRVPEIVQEIKAGRFDAAILEDTI-AKHYLEKVKGLQGIEIQEAPEEVGAAIALPKNSDK 232 Query: 237 WYNIVSWTHYAMVTAEELGITQK 259 E + +K Sbjct: 233 TAEFNKVIQKMKENGEMNKLVKK 255 >gi|86146431|ref|ZP_01064754.1| ABC-type amino acid transport, signal transduction system,periplasmic component/domain [Vibrio sp. MED222] gi|218709049|ref|YP_002416670.1| lysine-arginine-ornithine-binding periplasmic protein [Vibrio splendidus LGP32] gi|85835694|gb|EAQ53829.1| ABC-type amino acid transport, signal transduction system,periplasmic component/domain [Vibrio sp. MED222] gi|218322068|emb|CAV18138.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Vibrio splendidus LGP32] Length = 256 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 79/220 (35%), Gaps = 14/220 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ GI F+ +A+G KGFDVD AL + + K + + + Sbjct: 22 KEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCTEM---QVKCKIVAQDWDGIIP 78 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 +L +++ D + T R+ + F FI K G+ + LSG I V Sbjct: 79 SLLARKYDAIIAAMSITEERKK--KIDFTGKYALIPNKFIAKKGAGL-NFDDLSGQKIAV 135 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q TT + L D + + + +E R A GD SAL L Sbjct: 136 QRATTHDKYLTDNY---GDTVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEGVLNKAG 192 Query: 211 PSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 ++ + ++ A+ + D + + Sbjct: 193 GEDYEFVGPSLTDPKWFGEGFGIALRKQDKDLTKQLDAAI 232 >gi|254239636|ref|ZP_04932958.1| hypothetical protein PA2G_00253 [Pseudomonas aeruginosa 2192] gi|126193014|gb|EAZ57077.1| hypothetical protein PA2G_00253 [Pseudomonas aeruginosa 2192] Length = 273 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 79/232 (34%), Gaps = 6/232 (2%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + A L DI + G L+C + A + GFDVD+C L+ A+ Sbjct: 17 CSLAGLAQADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKALDVKA 76 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 ++ +R AL S + D++ +T TL R ++G+ + + + + Sbjct: 77 EIVE---TPFPDRIPALVSGRADVIVASTSDTLERAKTIGM--SIPYFAFVKVVLTREDT 131 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAY 194 I+S L G + AGT L L KA K ++ + A DA Sbjct: 132 SIASYEDLKGRPVGGTAGTFEALALEKDSKAWGDAKGSFRAYQSEADTALAISQGHIDAT 191 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + + +A + + N ++ Sbjct: 192 VVSSTVAASWIKSGKYKGLKIAGDAPYDIDYVALGAKRNEYGLLNYLNLFIN 243 >gi|330874081|gb|EGH08230.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 261 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 83/233 (35%), Gaps = 10/233 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + +A+ L D+ RG LK + F V + +G D+D + L+ + Sbjct: 17 MLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAQLLADRL---K 73 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++ P+N+ R L + ++D++ + RE + F Sbjct: 74 VKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFSRAYAPFYLAVFGPPDS 131 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + ++ L G +I V G ++ L+ FE AAY A + D Sbjct: 132 PVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDNNSTIAAYLAGQTDLIA 188 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + A ++ P L + SP+ + +G E + V+ A Sbjct: 189 SGNVVMVA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLSKVNEILNAA 239 >gi|159186274|ref|NP_355978.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|159141408|gb|AAK88763.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 267 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 50/230 (21%), Positives = 86/230 (37%), Gaps = 10/230 (4%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +I RG +K G+ TG V G+ G+DVD + S + ++ +PL Sbjct: 31 SLSEITARGKVKIGVLTGAPPMGMVDEKGNPSGYDVDVANLIGSYL---SLPVELVPLTP 87 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 R ALQ+ ++D L T R + + F I K + ++ L G Sbjct: 88 PARIPALQTGKVDFLVATLAPTGERAKT--VMFTQPYSAFNMDIISGKDQKFENLDSLKG 145 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + V G++ E L KA+ +V+E A A + DA + Sbjct: 146 KRVSVNRGSSQETALR---KANVEGLEIVVYEDDSTSAQALLAGQVDAVAL--PSTVGEA 200 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + RP + + + + A D E ++ + Y M + +L Sbjct: 201 IIKQRPEAGLQVGFTFFQQGNSMATKIEDFELRQWLNTSIYLMKMSGDLD 250 >gi|313496645|gb|ADR58011.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas putida BIRD-1] Length = 250 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 86/252 (34%), Gaps = 22/252 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 YK F ++ +++ + + L+ GI F A+G+ GFD Sbjct: 4 YKKFLLAAAATLVMTANAMAAE-----------KLRMGIEAAYPPFNNKDASGNVVGFDK 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D AL + + + + + AL +K+ D L + T R+ + F Sbjct: 53 DIGDALCAKMKVE---CSVVTSDWDGIIPALNAKKFDFLVSSLSITDERK--QAVDFTEP 107 Query: 122 TYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K + L G I Q T L D + +++ E Sbjct: 108 YYSNKLQFIAPKNVDFKTDKASLKGKVIGTQRATLAGTYLED----NYPDVDVKLYDTQE 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + R D D Y + D + ++ + A+ +GDT+ + Sbjct: 164 NAYLDLVSGRIDGILADKYVQYEWLKSKDGSNFEFKGEPVMDSDKIGIAVRKGDTKLRDD 223 Query: 241 VSWTHYAMVTAE 252 ++ A + A+ Sbjct: 224 LNKAL-AEIKAD 234 >gi|311031432|ref|ZP_07709522.1| amino acid ABC transporter ATP-binding protein [Bacillus sp. m3-13] Length = 259 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 36/247 (14%), Positives = 82/247 (33%), Gaps = 17/247 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG--DIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + L L+ + + ++ K + F+ +G+ G Sbjct: 1 MKKRVLLVTLFLLSTILAACGGKTTTSEGYELVKEDKFIFASSGEFAPFSVTDGSGNMTG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD++ A+++ + +P + +Y +++ + D + T R + F Sbjct: 61 FDIEVGEAIAAELGLEPEQEKY---TFASIVEGVKNGRFDAAVASHTITEER--LKEVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y+ G + I ++ L G I V G+T + + + + ++ Sbjct: 116 STPYYYSGAQIFVRPDSEIQTMDDLEGVEIAVSRGSTYADLVE------GVSDNIVNYDS 169 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 A R DA D + E +++ +S A A+ +G+ Sbjct: 170 DVVALEALNNGRHDAVVTD---FVTGREAIGSGMELEA-RELLDRSEQAVAVAKGNEALL 225 Query: 239 NIVSWTH 245 ++ Sbjct: 226 EAINEAL 232 >gi|308070242|ref|YP_003871847.1| Probable amino-acid ABC transporter extracellular binding protein yckK precursor [Paenibacillus polymyxa E681] gi|305859521|gb|ADM71309.1| Probable amino-acid ABC transporter extracellular binding protein yckK precursor [Paenibacillus polymyxa E681] Length = 286 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 74/272 (27%), Gaps = 39/272 (14%) Query: 1 MYK-DFFVSILCLIILFFTSFS-------------------------TNASILGDIKKRG 34 M K F +L ++ L ++ T + L +K G Sbjct: 4 MKKFSFLPIVLIVMALLVSACGNNDKGASTNNASTGDNGSNNGKADTTATATLESVKASG 63 Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ G F A G GFDVD +S + P ++ F L S Sbjct: 64 KLRIGTEGTYAPFTYHDAAGKLTGFDVDIATEVSKRLGVQPE---FIETQWDGIFAGLNS 120 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAG 153 K+ D + T R+ F + I + L G Sbjct: 121 KRFDTVFNEVSITDERK--QKYDFSDPYIVSKAVLIVSEDNTDIQKFADLKGKKAG---- 174 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 + L K++ + E + + R DA D + LK Sbjct: 175 QSLTSNLTQIAKSNG--AEIVATEGFNQAIDLLTSKRVDATVNDGLSYLDLKKQKPDAP- 231 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + S A +G + V+ Sbjct: 232 IKKVDESSDASHSAAVFNKGSEDLIKEVNKAL 263 >gi|170078777|ref|YP_001735415.1| glutamine-binding protein [Synechococcus sp. PCC 7002] gi|169886446|gb|ACB00160.1| glutamine-binding protein [Synechococcus sp. PCC 7002] Length = 260 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 96/246 (39%), Gaps = 12/246 (4%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 + F ++ T A+ L I+ RG L+ + + G+ +G +++ L Sbjct: 11 LAIAASFFFGSTSLTQATPLETIQARGILRVAVKENVRPLGFRDEAGNLQGLEIEIAHQL 70 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++ + D ++ +PL +ER A+ + ++D++ R+ + F P Y DG Sbjct: 71 AAELLGDRQAVELIPLTNQERLDAVLTGEVDLVIAQLGLNASRQRL--VNFSPYYYLDGI 128 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 GF+ + I S++Q+S I V G+ + YF + +E Sbjct: 129 GFVTRDR-EIQSLNQISDQRIVVLEGSEAIAAVRAYFP----GVTLVGVNSYQEALNYLE 183 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD--TEWYNIVSWTH 245 + + GD S L E+ +LP ++ +PLA A +G + T Sbjct: 184 NNETAFFAGDHSVLTGWVQEYP---EYQLLPAWLTGNPLAIAFPKGRQHQSLSQALQKTV 240 Query: 246 YAMVTA 251 + Sbjct: 241 TDWQNS 246 >gi|227834107|ref|YP_002835814.1| putative extracellular solute-binding protein [Corynebacterium aurimucosum ATCC 700975] gi|262183407|ref|ZP_06042828.1| putative extracellular solute-binding protein [Corynebacterium aurimucosum ATCC 700975] gi|227455123|gb|ACP33876.1| putative extracellular solute-binding protein [Corynebacterium aurimucosum ATCC 700975] Length = 363 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 85/210 (40%), Gaps = 10/210 (4%) Query: 29 DIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 DI RG L G++ + A+G+ +GF+VD R ++ IF DP+K+ + + A E Sbjct: 92 DILARGRLIVGVDRSNNLLSYRDTASGEVRGFEVDIAREIARDIFGDPNKVDFRFVEASE 151 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R AL + +DI+ R + R+ ++F ++ K G+ S++ +G + Sbjct: 152 RARALNDRTVDIVIRTMTISPSRQR--EVSFSIPYMQTDARLLVLKNSGVESIADTAGMT 209 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C G+T + + A + + A + + D D + L + Sbjct: 210 LCATKGSTMVDAIRTHAPA----SDILETRAWGDCLMALQLGQADGIVVDDALLSGMLAQ 265 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 I+ + A+ + D + Sbjct: 266 ---DRYTEIVGGPLESQSYGVAVRKPDGSY 292 >gi|311742426|ref|ZP_07716235.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Aeromicrobium marinum DSM 15272] gi|311314054|gb|EFQ83962.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Aeromicrobium marinum DSM 15272] Length = 293 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 81/227 (35%), Gaps = 9/227 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYL 81 + + ++ ++G +K G+ G A D GFD + + L+S + D I+++ Sbjct: 44 AGTRMAELNEQGTVKIGVKFDQPGIGFKGATQDVPSGFDPEMGKILASKLGIDSQDIEWV 103 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + R L+S +D + + T R +G A P + IS Sbjct: 104 ETISSNREPFLESGTVDFVIASYSITDDRRTIVGQA-GPYYVTGQALMVAADDDSISGPE 162 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G +C G+T+ T+ + + A P F+ E DA T D + L Sbjct: 163 DLDGKIVCSVTGSTSIKTVEEEYGA-----QPAPFDTYSECTDQLLNGSVDAVTTDAAIL 217 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + P + ++ D S+ E ++ A Sbjct: 218 LGYAA--ENPDQLKVVGDPFSEERYGIGYGLDHPELCEFINEVLEAA 262 >gi|186472290|ref|YP_001859632.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184194622|gb|ACC72586.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 259 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 83/250 (33%), Gaps = 20/250 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L + + + ++ L+ GI F A+G +GFD Sbjct: 1 MNLKLSFAAAVLAMTAGAACAQSSDT---------LRFGIEAAYPPFESKSASGQLEGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + + K ++ ALQ+++ D+++ + T R+ S+ P Sbjct: 52 VDVGNAVCAKL---KMKCVWVENAFDGLIPALQARKFDVINSAMNITSKRKESIAFT-PP 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I H V L G + V G++ E L ++ + ++ + Sbjct: 108 IYIVPIVMIAKHGSGLKPDVKNLQGKHVGVLQGSSQEDFLKAHWANAG--VQVVSYQDQD 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDT 235 ++ A A R DA + L + I+ + + + +GD Sbjct: 166 QVYADLVAGRLDAAVQEAQTASDGFLNKPAGAGFEIVGEPLKDPSTLGEGTGFGLRKGDK 225 Query: 236 EWYNIVSWTH 245 V Sbjct: 226 ALQAKVDGAL 235 >gi|23500424|ref|NP_699864.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella suis 1330] gi|148558719|ref|YP_001257649.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella ovis ATCC 25840] gi|161620736|ref|YP_001594622.1| extracellular solute-binding protein [Brucella canis ATCC 23365] gi|163844811|ref|YP_001622466.1| hypothetical protein BSUIS_B0666 [Brucella suis ATCC 23445] gi|225629163|ref|ZP_03787196.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella ceti str. Cudo] gi|254699906|ref|ZP_05161734.1| hypothetical protein Bsuib55_03472 [Brucella suis bv. 5 str. 513] gi|254703028|ref|ZP_05164856.1| hypothetical protein Bsuib36_03642 [Brucella suis bv. 3 str. 686] gi|254711058|ref|ZP_05172869.1| hypothetical protein BpinB_12527 [Brucella pinnipedialis B2/94] gi|256029439|ref|ZP_05443053.1| hypothetical protein BpinM2_02090 [Brucella pinnipedialis M292/94/1] gi|256157636|ref|ZP_05455554.1| hypothetical protein BcetM4_02115 [Brucella ceti M490/95/1] gi|256253389|ref|ZP_05458925.1| hypothetical protein BcetB_03642 [Brucella ceti B1/94] gi|260167468|ref|ZP_05754279.1| hypothetical protein BruF5_03607 [Brucella sp. F5/99] gi|260568043|ref|ZP_05838512.1| solute-binding protein/glutamate receptor [Brucella suis bv. 4 str. 40] gi|261220511|ref|ZP_05934792.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella ceti B1/94] gi|261318649|ref|ZP_05957846.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis B2/94] gi|261750382|ref|ZP_05994091.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5 str. 513] gi|261753639|ref|ZP_05997348.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3 str. 686] gi|261756881|ref|ZP_06000590.1| solute-binding protein/glutamate receptor [Brucella sp. F5/99] gi|265986448|ref|ZP_06099005.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella pinnipedialis M292/94/1] gi|265996141|ref|ZP_06108698.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella ceti M490/95/1] gi|23464047|gb|AAN33869.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella suis 1330] gi|148370004|gb|ABQ62876.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella ovis ATCC 25840] gi|161337547|gb|ABX63851.1| extracellular solute-binding protein family 3 [Brucella canis ATCC 23365] gi|163675534|gb|ABY39644.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|225615659|gb|EEH12708.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella ceti str. Cudo] gi|260154708|gb|EEW89789.1| solute-binding protein/glutamate receptor [Brucella suis bv. 4 str. 40] gi|260919095|gb|EEX85748.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella ceti B1/94] gi|261297872|gb|EEY01369.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis B2/94] gi|261736865|gb|EEY24861.1| solute-binding protein/glutamate receptor [Brucella sp. F5/99] gi|261740135|gb|EEY28061.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5 str. 513] gi|261743392|gb|EEY31318.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3 str. 686] gi|262550438|gb|EEZ06599.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella ceti M490/95/1] gi|264658645|gb|EEZ28906.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella pinnipedialis M292/94/1] Length = 257 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 72/246 (29%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ +I + + L IK G LK G F + GFD Sbjct: 1 MKFAQILATAGIIQAVLFTGAMAGENLDAIKSAGVLKIGTEGTYAPFTYHDKDNKLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A++ + P ++ L + + D + T R+ F Sbjct: 61 VEIGEAIAGKLGVKPE---FVEGKWDGLIAGLDANRYDAVINQVGITEERKK--KFNFSN 115 Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + K I + L G Q+ T+ LA A + + Sbjct: 116 PYIVSKVVLIVNDKNDTIKDFADLKGKK-AAQSLTSNYGRLAKEAGAK-----LVATDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ R DA D + + + ++ + + + +GD E Sbjct: 170 DQSIQLVLTGRADATLNDSLSYLDFRKHQPKAPV-KVVAEKDEATASGIIVRKGDDELVA 228 Query: 240 IVSWTH 245 ++ Sbjct: 229 AINKAL 234 >gi|326333229|ref|ZP_08199476.1| glutamate-binding protein [Nocardioidaceae bacterium Broad-1] gi|325948873|gb|EGD40966.1| glutamate-binding protein [Nocardioidaceae bacterium Broad-1] Length = 272 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 79/230 (34%), Gaps = 8/230 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 +K GI G +A+G + GFDVD ++ + + +I+++ + R L+ Sbjct: 36 KIKIGIKFDQPGLGFKEADGSYSGFDVDMATYIAEGLGYEGDQIEFVEAVSANRETFLKD 95 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAG 153 +D++ T R+ + F Y GQ ++ + L G +C G Sbjct: 96 GTVDMILATYSITDERKA--EVDFAGPYYIAGQDLLVAADNTDITGPDTLDGKKLCSVTG 153 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T+ + D + F+ + A + DA T D L P + Sbjct: 154 STSAQKVKDEYAK---GVQLQEFDTYSKCVTAIEGGQLDAMTTDDIILAGYAQQ--DPGK 208 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 I+ S+ + +G + I + N+ + Sbjct: 209 FKIVGAPFSEENYGVGLPKGSKDRDKINDLIEQSFEDGAWEKAFNDNLGE 258 >gi|261339174|ref|ZP_05967032.1| hypothetical protein ENTCAN_05398 [Enterobacter cancerogenus ATCC 35316] gi|288319019|gb|EFC57957.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Enterobacter cancerogenus ATCC 35316] gi|295096440|emb|CBK85530.1| L-arginine-binding protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 243 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 84/247 (34%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALLASVSLSATAAQ-------------TIRFATEASYPPFESIDANNKIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I + + +L+ ++ID + D T RE + F Sbjct: 48 VDLANALCKEI---DATCTFSNQAFDSLIPSLKFRRIDAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K +SV L G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFIGQKG-KYASVDLLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + ND+ + + L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDAVFGDTAVVTEWLKANDKLAAVGDKVTDKDYFGTGLGIAVRQGNTELQ 217 Query: 239 NIVSWTH 245 + Sbjct: 218 QKFNAAL 224 >gi|222151827|ref|YP_002560987.1| glutamine-binding periplasmic protein homolog [Macrococcus caseolyticus JCSC5402] gi|222120956|dbj|BAH18291.1| glutamine-binding periplasmic protein homolog [Macrococcus caseolyticus JCSC5402] Length = 483 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 96/273 (35%), Gaps = 23/273 (8%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVD 62 V I+ L + F++ + IKK G L+ G++ + + G D++ Sbjct: 11 LVFIVLLSVFPFSTARSATDQYDVIKKNGVLRVGLSADYAPYEFEKTKNGKRVYAGIDIE 70 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + L+ + + ++ + + AL++ +ID+++ T R+ + F Sbjct: 71 LSKKLAKDLGVE---LKIVNMQFDSLLGALKTGKIDMIASGMSPTPERKK--EVDFTDYY 125 Query: 123 YFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Q I+ K K + S+ +G +I VQ TT E RV Sbjct: 126 MHVQQRMIIQKKDKDKLKSIEDFTGKAIGVQKQTTQEELAKKEIPEA----EVQSLTRVP 181 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 EI + + D + A N L ++ A AI + + + Sbjct: 182 EIIMSLNTGKIDGVILEGPVGEAYLSQNKT-LTFSELQFADAEKGTAIAIPKNSPKLLSE 240 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 ++ + KN+ Q KD N ++ Sbjct: 241 LNKHI--------KEVNDKNLIQDYKDKANQEM 265 >gi|300172544|ref|YP_003771709.1| glutamine-binding protein [Leuconostoc gasicomitatum LMG 18811] gi|299886922|emb|CBL90890.1| glutamine-binding protein [Leuconostoc gasicomitatum LMG 18811] Length = 288 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 93/252 (36%), Gaps = 19/252 (7%) Query: 4 DFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58 V+++ L +++ T+ + + L ++K G + G+ F + G +G Sbjct: 15 IVLVAVIVLGLMWATATANRNAEHQDTLARVEKLGRIVWGVKADTRLFGLMDTKTGISQG 74 Query: 59 FDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 FD+D RAL+ I P +++P++ + L++ ID T RE Sbjct: 75 FDIDIARALTVQISKQTGVPMSAEFVPVSTASKMQLLKNTNIDGSVSTMTITPEREKI-- 132 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + GQ ++ K GI+S+ ++ +I V GTT A + Sbjct: 133 IDFTNQYFDAGQSILVKKDSGINSIKDMNSSKYTIIVVVGTTAATETAKFAPKAK----L 188 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + A ++ + A + D + LY N ++ I + P A Sbjct: 189 LAVQDYATGMQALKSGQGQAMSTDNAILYGFATENP---DYHIAGGTFTHGPYGIAFDNN 245 Query: 234 DTEWYNIVSWTH 245 + Sbjct: 246 QKPMIKETNAAL 257 >gi|152985442|ref|YP_001349486.1| putative ABC transporter binding protein subunit [Pseudomonas aeruginosa PA7] gi|150960600|gb|ABR82625.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa PA7] Length = 273 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 6/232 (2%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + A L DI + G L+C + A + GFDVD+C L+ A+ Sbjct: 17 CSLAGLAQADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKALDVKA 76 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 ++ +R AL S + D++ +T TL R ++G+ + + + + Sbjct: 77 EIVE---TPFPDRIPALVSGRADVIVASTSDTLERARTIGM--SIPYFAFVKVVLTREDT 131 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAY 194 GI+S + L G + AGT L L KA K ++ + A DA Sbjct: 132 GIASYADLKGRPVGGTAGTFEALALEKDSKAWGDAKGSFRAYQSEADTALAISQGHIDAT 191 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + + +A + + N ++ Sbjct: 192 VVSSTVAASWIKSGKYKGLKIAGDAPYDIDYVALGAKRNEYGLLNYLNLFIN 243 >gi|47564801|ref|ZP_00235845.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Bacillus cereus G9241] gi|229154560|ref|ZP_04282677.1| Extracellular solute-binding protein family 3 [Bacillus cereus ATCC 4342] gi|47558174|gb|EAL16498.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Bacillus cereus G9241] gi|228628958|gb|EEK85668.1| Extracellular solute-binding protein family 3 [Bacillus cereus ATCC 4342] Length = 265 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 74/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ +S + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELAEEVSKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSKPYVSSSAVLVIAKDKDKPATFADVKGLK-AAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 E + R D +T + L + ++ I+ S Sbjct: 170 EITNVEGFSQAAELLNTGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G + V Sbjct: 229 KGSDKLVQEVDKAL 242 >gi|324112238|gb|EGC06216.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia fergusonii B253] Length = 246 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 93/260 (35%), Gaps = 28/260 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + V +L L F + + N L G + + V A+ GFD Sbjct: 1 MKQKLLVMLLA--GLSFQATAANTKT---------LHFGTSATYAPYEFVDADNQIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A+ + ++ Q+ + L+ K+ D + D T RE ++F Sbjct: 50 IDVAKAVCKEM---QAECQFTNQSFDSLIPGLRFKKFDAVIAGMDMTAKRE--QQVSFSQ 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ +K +S ++L G I ++ GTT + L D K + ++ Sbjct: 105 PYYEGLSAVVVTRKGAYNSFAELKGKKIGLENGTTHQRYLQDKQKE----ITAVAYDSYL 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPL----APAIIQGDT 235 +++R D GD + A+ ++ I+ + A+ +G+ Sbjct: 161 NAFTDLKSNRLDGVFGD---VAAIGKWLKNNPDYAIMDERAKDPEYYGKGLGIAVRKGND 217 Query: 236 EWYNIVSWTHYAMVTAEELG 255 ++ + + E Sbjct: 218 ALLAEINAALDKVKASPEYA 237 >gi|290473512|ref|YP_003466381.1| putative cysteine ABC transporter periplasmic binding protein [Xenorhabdus bovienii SS-2004] gi|289172814|emb|CBJ79585.1| putative cysteine transport protein (ABC superfamily, peri_bind) [Xenorhabdus bovienii SS-2004] Length = 257 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 75/262 (28%), Gaps = 13/262 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + +I L T + S L +I+ G + G F+ A+G GFD Sbjct: 1 MNIILNILLATIIQLGITQLAYAKSTLDNIQSTGVFRIGTEGAYAPFSYHDASGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R ++ + P ++ L + + D + T RE +F Sbjct: 61 VEIGREIALRMKVKPE---FIEGKWDGLIGGLDAGRSDAVMNQIAITPEREK--KYSFSL 115 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I K I + L G + + T A + + I Sbjct: 116 PYVISEAVLITRKDNNDIKTFRDLKGRT----SSHTLTNNFAQIARHYG--AEIIGTNGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + K ++ D + A + + D E Sbjct: 170 SQEVELVSTGRADATINDKLSYLDYKKHRPDAPVKIVAADTNAAQ-TAVLLRKSDPELKA 228 Query: 240 IVSWTHYAMVTAEELGITQKNI 261 V + N Sbjct: 229 AVDKAITEIKNDGTYQQIWDNY 250 >gi|255322519|ref|ZP_05363664.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter showae RM3277] gi|255300427|gb|EET79699.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter showae RM3277] Length = 273 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 43/243 (17%), Positives = 79/243 (32%), Gaps = 22/243 (9%) Query: 2 YKDFFVSILCLIILFFTSFSTN--ASILGDIKK-------RGFLKCGINTGLVGFAEVKA 52 +K FV + ++L S+N AS +K + ++ G + F + Sbjct: 14 FKKLFVFVAAALMLSGCGQSSNEKASKDAAVKNEAAPVAVQQTIRVGSSADYPPFEYIDE 73 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GF++D A+ I ++ AL++ +ID T R Sbjct: 74 HNKIVGFEIDMIEAVGKKIGVK---FDIQNMSFDGLIPALKTGKIDAALSGMSATEERRK 130 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F YF FI K + ++ ++ ++ + TL + Sbjct: 131 --SVDFTKPYYFSDNLFIRKKG------TDVNATNMHLKKISAQIGTLQESAAKSICGDL 182 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E V + +A + D D Y N E + LPD A A + Sbjct: 183 SVPAETVAAAILSLKAGKIDVVLTDSPIGYEYLKQNSDLEEFLKLPD--GTEGFAVAFDK 240 Query: 233 GDT 235 Sbjct: 241 DKH 243 >gi|281177998|dbj|BAI54328.1| arginine ABC transporter substrate binding component [Escherichia coli SE15] Length = 243 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 85/249 (34%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + F Sbjct: 48 VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D+ GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTH 245 + Sbjct: 216 LQQKFNTAL 224 >gi|86741119|ref|YP_481519.1| extracellular solute-binding protein [Frankia sp. CcI3] gi|86567981|gb|ABD11790.1| amino acid ABC transporter substrate-binding protein, PAAT family [Frankia sp. CcI3] Length = 343 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 79/223 (35%), Gaps = 8/223 (3%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 ++L I++RG+L G+ + F + G ++GFDV+ + IF +++ Sbjct: 94 GTVLETIERRGYLIAGVLADVPPFGSISPFTGQFEGFDVEIANLVGRRIFGADGHVRFRA 153 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ER L+ +D++ R + F + Y + Q ++ + + Sbjct: 154 VTYAERIPVLRDGAVDVVVATMTTNCERRAL--VDFSAVYYNETQRVLVPRDSPYQGMDD 211 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G +C AG + + + + +A DA + L Sbjct: 212 LGGRRVCTAAGAAAGAAAT--IRRAPSRPVLRTVPNIADCLVLLQAGEVDAVMTTTAILN 269 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + R ++ +S P A A+ E V+ Sbjct: 270 GMAAQDPR---LYVVGPALSDEPDAVAVSLDHPELTRFVNGVL 309 >gi|320331821|gb|EFW87759.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 261 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 83/244 (34%), Gaps = 10/244 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + +A+ L D+ RG LK + F V + +G D+D + L+ + Sbjct: 17 MLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAQLLADQL---K 73 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++ P+N+ R L + ++D++ + RE + F Sbjct: 74 VKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFSRAYAPFYLAVFGPPDS 131 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + ++ L G +I V G ++ L+ FE AAY A + D Sbjct: 132 PVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDNNSTIAAYLAGQTDLIA 188 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + A ++ P L + SP+ + +G E V A L Sbjct: 189 SGNVVMAA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLGKVDEILNAAKADGALE 246 Query: 256 ITQK 259 + Sbjct: 247 KASQ 250 >gi|296103996|ref|YP_003614142.1| histidine/lysine/arginine/ornithine transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058455|gb|ADF63193.1| histidine/lysine/arginine/ornithine transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 260 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 93/279 (33%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L++ + + A++ ++ G + F+ A GD+ GFD Sbjct: 1 MKKTVL--ALSLLVGLSAAAGSYAALPQ------TVRIGTDATYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + I K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRI---AVKCTWVGSDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E ++ + + ++ Sbjct: 108 KLYAADSRLIAAKGSPIQPTIDSLKGKHVGVLQGSTQEGYANANWREKGVD--VVAYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + A R DA D A L ++ + + + D Sbjct: 166 DLIYSDLAAGRLDAAFQDEVAASEGFLKQPAGKDYAFAGPSVKDKKYFGDGTGIGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE A A ++++K + +V Sbjct: 226 TELKA-------AFDKAFAELRKDGTYDKLAKKYFDFNV 257 >gi|157369898|ref|YP_001477887.1| cationic amino acid ABC transporter periplasmic binding protein [Serratia proteamaculans 568] gi|157321662|gb|ABV40759.1| cationic amino acid ABC transporter, periplasmic binding protein [Serratia proteamaculans 568] Length = 243 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 83/249 (33%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L I + ++ ++ F + A +GFD Sbjct: 1 MKKLIIAAVLAGISVSASAAE-------------TIRFATEASYPPFEFIDAGNKIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + ++ + +L+ K+ D + D T RE + F Sbjct: 48 VDLANALCKEM---QAECTFTNQAFDSLIPSLKFKRFDAVMAGMDITPEREK--QVLFTK 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ K ++ V+ L G + VQ GTT + L D + ++ + Sbjct: 103 PYYDNSALFVAQKG-KVADVAALKGKKVGVQNGTTHQKYLTDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R DA GD + + + + + K L A+ Q +T+ Sbjct: 158 NAILDLKNGRVDAVFGDTAVVNEWLKQ--NAALAAVGDKVTDKDYFGTGLGIAVRQKNTD 215 Query: 237 WYNIVSWTH 245 + Sbjct: 216 LQGKFNAAL 224 >gi|238792442|ref|ZP_04636076.1| Arginine-binding periplasmic protein 2 [Yersinia intermedia ATCC 29909] gi|238728368|gb|EEQ19888.1| Arginine-binding periplasmic protein 2 [Yersinia intermedia ATCC 29909] Length = 243 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 84/250 (33%), Gaps = 25/250 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L + F++ + ++ + F + AN + GFD Sbjct: 1 MKKLLLATL--LSGMVFSATAAE-----------TIRFAASATYPPFESMDANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + +K + AL+ K+ D + D T R + F Sbjct: 48 MDLAKALCKQM---EAKCTFTNQAFDSLIPALKFKRYDAVISGMDITPERSKQVA--FTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K SS + L G I ++ GTT + L D + ++ + Sbjct: 103 PYYANSAIVIAPKG-KFSSFADLKGKKIGMENGTTHQKYLQDKHPE----IQTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + TN + + L A+ +T Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPNLASVGEHVTDPQYFGTGLGIAVRPDNTALL 217 Query: 239 NIVSWTHYAM 248 ++ A+ Sbjct: 218 EKLNKAIDAV 227 >gi|325062203|gb|ADY65893.1| amino acid ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 267 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 50/230 (21%), Positives = 86/230 (37%), Gaps = 10/230 (4%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +I RG +K G+ TG V G+ G+DVD + S + ++ +PL Sbjct: 31 SLSEITARGKVKIGVLTGAPPMGMVDEKGNPSGYDVDVANLIGSYL---SLPVELVPLTP 87 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 R ALQ+ ++D L T R + + F I K + ++ L G Sbjct: 88 PARIPALQTGKVDFLVATLAPTGERAKT--VMFTQPYSAFNMDIISGKDQKFENLDSLKG 145 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + V G++ E L KA+ +V+E A A + DA + Sbjct: 146 KRVSVNRGSSQETALR---KANVEGLEIVVYEDDSTSAQALLAGQVDAVALPST--VGEA 200 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + RP + + + + A D E ++ + Y M + +L Sbjct: 201 IIKQRPEAGLQVGFTFFQQGNSMATKIEDFELRQWLNTSIYLMKMSGDLD 250 >gi|282896969|ref|ZP_06304973.1| extracellular solute-binding protein, family 3 [Raphidiopsis brookii D9] gi|281198142|gb|EFA73034.1| extracellular solute-binding protein, family 3 [Raphidiopsis brookii D9] Length = 274 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 93/250 (37%), Gaps = 15/250 (6%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + ++ L T ++ A+ + +I++RG++ + + A G+ +G ++D Sbjct: 19 TILLFSWVVLPLPGTINTSLAATMQEIEERGYITIAVKDNIPPLAFRDKQGNLQGLEIDL 78 Query: 64 CRALSSAIFDD------PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 + L+ + D ++++ P+ ER + + ++D+ T R + L+ Sbjct: 79 AKRLTRDLLGDSPSSRVKLQVKFQPVTNMERLPVVFNHRVDLAIARVTATPSRSRIVSLS 138 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 I+ K I S L+ ICV ++T + + + Sbjct: 139 IPYYYDGTA---IVTKNLTIQKPSDLNKRRICVLNYSSTIPHVRYAIP----QGELVGVN 191 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDT 235 E + DA D + +++ S++ IL D +S PL+ + + Sbjct: 192 SYLEAKKLLDNGQVDACAADSTVFQGWIEADNQYSQYKILLDKLSVEPLSIVMPKGLQYD 251 Query: 236 EWYNIVSWTH 245 E V+ Sbjct: 252 ELRTRVNDLI 261 >gi|295675886|ref|YP_003604410.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. CCGE1002] gi|295435729|gb|ADG14899.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. CCGE1002] Length = 258 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 86/251 (34%), Gaps = 24/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L ++ + + K+ ++ G++ F NGD GFD Sbjct: 1 MKK--FALCVALAVMATGAMA---------KEWKTVRIGVDASYPPFESKAPNGDIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D RAL + + K ++ + AL++++ D++ + T R + F Sbjct: 50 ADLTRALCAKM---NVKCVWVTQDLDGLIPALKARKFDVIISSLSVTDKR--REQIDFSD 104 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I + + L + V+ G+T E +++ + ++ Sbjct: 105 KMFDAPARMIAKTGSPLLPTPESLKRKRVGVEQGSTQEQYAKVWWEPKG--VVVVPYQNQ 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISK----SPLAPAIIQGD 234 +++ A + R DA D A L R P++ A + + D Sbjct: 163 DQVYADLASGRLDAALQDEVQADAGFLKTPRGKGFSWAGPEVKDPKTIGEGTAIGLRKAD 222 Query: 235 TEWYNIVSWTH 245 + + Sbjct: 223 ADLKAKFNQAL 233 >gi|228963461|ref|ZP_04124619.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar sotto str. T04001] gi|228796232|gb|EEM43682.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar sotto str. T04001] Length = 264 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M + + + + + G + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESSTTSSNGEKEFRYAMSGLYKPFNYKENDGKLVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD++ AL+ + + + + LQ+K+ D++ + T R ++F Sbjct: 61 FDLEIGEALAKKMNMKATPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVSF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTAISSPEDLKGKKIGVVKASTFKNLVA------KYTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + + + Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDNKKM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|282862287|ref|ZP_06271349.1| extracellular solute-binding protein family 3 [Streptomyces sp. ACTE] gi|282562626|gb|EFB68166.1| extracellular solute-binding protein family 3 [Streptomyces sp. ACTE] Length = 307 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 77/225 (34%), Gaps = 10/225 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 ++ K+RG L G A + GFD++ + +++ + +I++ Sbjct: 58 DSPAFKKAKERGKLIIGAKADQPYLGFEDQATKERSGFDIEIAKMIAADLGFSDKQIEWK 117 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSV 140 +++ R A+ Q+D L R+ +G F Y G ++ K I+ Sbjct: 118 TVDSGIRETAIAKGQVDYLVGTYTINDERKKQVG--FAGPYYKAGADLLVRKDESSITGK 175 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + G +C G+T + + + + + DA T D S Sbjct: 176 DAVKGKKVCSIVGSTPLQEIKKPE----YGASVVELAKYSDCVQQLLTKQVDAVTTDDSI 231 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L + ++ ++ P + + D + ++ + Sbjct: 232 LKGYAAA--NSGKLKVVGQPFTEEPYGVGLNKDDKALRDAINTSL 274 >gi|227431443|ref|ZP_03913492.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352809|gb|EEJ42986.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 288 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 91/253 (35%), Gaps = 20/253 (7%) Query: 4 DFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 ++ + ++ L + + + + L ++K G + G+ + F + G K Sbjct: 14 TIVLAAVIVLGLLWATTAAKKNEEHQDTLQRVEKLGRIIWGVKSDTKLFGLMDTKTGVSK 73 Query: 58 GFDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFDVD +AL+ I P +++P+++ + L++ ID T E Sbjct: 74 GFDVDIAKALTVQISKQTGVPMSAEFVPVSSSSKIQLLKNTNIDGTVSTMTITP--EREK 131 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYH 172 + F + GQ ++ K GI S+ ++ I V GTT + Sbjct: 132 NIDFTNQYFDAGQSILVKKDSGIKSIKDMNDSKYKIIVVVGTTAAEETKKFAPKAK---- 187 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + + A +A + A + D + LY + P ++ I+ + P A Sbjct: 188 LLAVQDYATGMQALKAGQGQAMSTDNAILYGFAT--ENP-DYQIVGGTFTHGPYGIAFDN 244 Query: 233 GDTEWYNIVSWTH 245 + Sbjct: 245 NQGPMVRETNKAL 257 >gi|317490081|ref|ZP_07948570.1| bacterial extracellular solute-binding protein, family 3 [Eggerthella sp. 1_3_56FAA] gi|316910786|gb|EFV32406.1| bacterial extracellular solute-binding protein, family 3 [Eggerthella sp. 1_3_56FAA] Length = 281 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 78/243 (32%), Gaps = 14/243 (5%) Query: 13 IILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 ++L S +A G L G + G + V +G + GFD++ +A+ Sbjct: 25 VMLAGCSGRGDAQSADSAATDGSFTLAVGFDQGYPPYGYVGDDGQFTGFDLELAKAVCEK 84 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + + ++ P++ + + S I+ + F ++ Q + Sbjct: 85 MGWE---LKLEPIDWDAKDALIGSGTINCIWNGFTM---ENRENDYTFSEPYMYNEQVVV 138 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH---NMKYHPIVFERVEEIDAAYR 187 + K + L+G ++ Q + L D + Sbjct: 139 VKKDSDAKKLEDLAGKTVLTQVDSAALHVLEDEKGQKALADTFKELQTIGDYNNAFMQLE 198 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 + DA D+S A +P +V L + A +GDTE V+ A Sbjct: 199 SGMVDAVACDLSI--ASYQMAAKPDTYVKLGVLAP-ENYAVGFKKGDTELAKQVTDALKA 255 Query: 248 MVT 250 + Sbjct: 256 LDE 258 >gi|300868858|ref|ZP_07113464.1| putative amino acid ABC transporter,substrate-binding protein [Oscillatoria sp. PCC 6506] gi|300333075|emb|CBN58656.1| putative amino acid ABC transporter,substrate-binding protein [Oscillatoria sp. PCC 6506] Length = 285 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 88/232 (37%), Gaps = 10/232 (4%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 + S + S L I G ++ + F V + +G+D+D + L+ + Sbjct: 35 AVAAAPSQSTAPGTSTLDKIISAGKVRIAVPQDSPPFGSVGTDMQPQGYDIDVAKMLAES 94 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + K++ +P+ + R LQS ++D++ + T R + F G Sbjct: 95 L---EVKLELVPVTSTNRIPYLQSDRVDLVISSLGATPERAK--SIYFSIAYAPFYSGIY 149 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 SS + LSG ++ V G+ ++ LA FE +A A + Sbjct: 150 GFPGINASSYTDLSGKTVGVTQGSLEDIELAKRAPK---DIQIKRFEDNSTTASALLAGQ 206 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + + A K++ D P + + ++ SP + +GD + V+ Sbjct: 207 IELMATGNTI--ANKISKDNPDKKIENKFVMKNSPCYIGVRRGDLDLLQWVN 256 >gi|302337060|ref|YP_003802266.1| extracellular solute-binding protein family 3 [Spirochaeta smaragdinae DSM 11293] gi|301634245|gb|ADK79672.1| extracellular solute-binding protein family 3 [Spirochaeta smaragdinae DSM 11293] Length = 257 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 80/249 (32%), Gaps = 21/249 (8%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + + L L + S I G + G F + NGD + Sbjct: 1 MKRITSVLLMIALLLPAATLFAGGKQESSDNTISFAG------SGGYPPFNFITENGDVE 54 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD ++ + ++Y L++ + D + + T RE + Sbjct: 55 GFDVDVAAEIAKRMGK---TLEYKTTAWDGIIEGLRAGRYDGILGSMGITEEREKV--VD 109 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y+ G I+ K GI S+LS +I + GTT E A+ + ++ Sbjct: 110 FSDPYYYSGPQLIVRKDSGIDGPSELSADNTIGLVTGTTFEG------DANALGVKVKLY 163 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E + R D D + ++ ++ + A D E Sbjct: 164 EDDNQTLMELLNGRVDGVLTDRIVGLNAIGKLKGGDKLTLVGSVLRTEKMGIAFQADDDE 223 Query: 237 WYNIVSWTH 245 V+ Sbjct: 224 LRETVNTIL 232 >gi|82699734|ref|YP_414308.1| glutamate-binding protein [Brucella melitensis biovar Abortus 2308] gi|260545445|ref|ZP_05821186.1| bacterial extracellular solute-binding protein, family 3 [Brucella abortus NCTC 8038] gi|82615835|emb|CAJ10837.1| Solute-binding protein/glutamate receptor:Ionotropic glutamate receptor:Bacterial extracellular solute-binding protein, family 3 [Brucella melitensis biovar Abortus 2308] gi|260096852|gb|EEW80727.1| bacterial extracellular solute-binding protein, family 3 [Brucella abortus NCTC 8038] Length = 282 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G F + +G GFDVD RAL + ++ ++ ALQ+ Sbjct: 49 KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 105 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152 + D + T R+ + F Y G K I + L+G +I VQ Sbjct: 106 GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 163 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT F + EE R DA D L T D Sbjct: 164 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 219 Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + D I + A +G E + A+ Sbjct: 220 CKMVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 259 >gi|325479869|gb|EGC82954.1| ABC transporter, permease protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 491 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 94/272 (34%), Gaps = 17/272 (6%) Query: 1 MYKDFFVSILCLIIL-FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F+ + + IL F AS DI G + G + + + + + G Sbjct: 1 MRKKFYRILSTIFILTMFLPVRAFAS--EDIVDDGVIDLGTSADFPPYEYYEGD-EIVGI 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D D +A+ + + I+ ++ ++QS +ID + T R+ + F Sbjct: 58 DPDIIKAIGDYLGVE---IKLHDMDFNNIIASIQSGKIDGGAAGFTVTEERKK--SVNFT 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Q I K I+ V L I Q GT + D F N F + Sbjct: 113 DSFTKTSQIIIKRKDSDINDVEDLKDKKKIGTQLGTIGDTIAKDDFGEEN----VTSFNK 168 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 V + + ++ + DA D + +N + I+ + A AI + + E Sbjct: 169 VPDAILSLQSKKIDAVILDEQSAKNFTSSNK---DLEIVDTPYLEEEYAIAISKDNPELL 225 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 ++ A+ + E+ ++ Sbjct: 226 EKMNEAIAALKESGEIDKIMAKYEASDNANSD 257 >gi|261420862|ref|YP_003254544.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y412MC61] gi|319768533|ref|YP_004134034.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y412MC52] gi|261377319|gb|ACX80062.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y412MC61] gi|317113399|gb|ADU95891.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y412MC52] Length = 273 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 70/223 (31%), Gaps = 11/223 (4%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 + + G + F ++ G GFDVD A+ A D + F +L Sbjct: 42 KKKVVVGTDAAFAPFEYMQ-KGKIVGFDVDLLDAVMKAAGLDYE---LKNIGWDPLFASL 97 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152 QSK++D+ T R+ F + Q ++ + + + L G +I VQ Sbjct: 98 QSKEVDMGISGITITDERK--QSYDFSDPYFEATQVILVKQGSPVKNALDLKGKTIGVQN 155 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT + F H FE DA D + N Sbjct: 156 ATTGQEAAEKLF---GKGPHIKKFETTVVAIMELLNGGVDAVITDNAVANEYVKNNPNKK 212 Query: 213 EHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 VI P + + ++E V ++ + + Sbjct: 213 LQVIEDPKNFASEYYGMIFPK-NSELKAKVDEALKNVINSGKY 254 >gi|165760995|pdb|2PVU|A Chain A, Crystal Structures Of The Arginine-, Lysine-, Histidine- Binding Protein Artj From The Thermophilic Bacterium Geobacillus Stearothermophilus Length = 239 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 70/223 (31%), Gaps = 11/223 (4%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 + + G + F ++ G GFDVD A+ A D + F +L Sbjct: 4 KKKVVVGTDAAFAPFEYMQ-KGKIVGFDVDLLDAVMKAAGLDYE---LKNIGWDPLFASL 59 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152 QSK++D+ T R+ F + Q ++ + + + L G +I VQ Sbjct: 60 QSKEVDMGISGITITDERK--QSYDFSDPYFEATQVILVKQGSPVKNALDLKGKTIGVQN 117 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT + F H FE DA D + N Sbjct: 118 ATTGQEAAEKLF---GKGPHIKKFETTVVAIMELLNGGVDAVITDNAVANEYVKNNPNKK 174 Query: 213 EHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 VI P + + ++E V ++ + + Sbjct: 175 LQVIEDPKNFASEYYGMIFPK-NSELKAKVDEALKNVINSGKY 216 >gi|154148689|ref|YP_001406380.1| polar amino acid ABC uptake transporter substrate binding protein [Campylobacter hominis ATCC BAA-381] gi|153804698|gb|ABS51705.1| polar amino acid ABC uptake transporter substrate binding protein [Campylobacter hominis ATCC BAA-381] Length = 271 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 96/246 (39%), Gaps = 16/246 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L +L NA+ L +I+ L+ G+ F+++K++G+++GF+ Sbjct: 1 MKKFLIFLVLAFSLL-------NANSLNEIRSSKTLRVGVYDAQPPFSQLKSSGEFEGFE 53 Query: 61 VDFCRALSSAIFDD-PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + F + ++ IF + +++ ++A +R LQ +D++ T R + F Sbjct: 54 IGFAKEIAKGIFGESGGNVEFKAVSANDRIKFLQDNSVDLVIATLTITDERAKL--VDFS 111 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K I SQL I Q G T E N+ ++ + + Sbjct: 112 NPYFAVNIGVLTRKDDEIKEFSQLKNKIIITQKGGTAEDYF------KNLGFNVMTCDNG 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +A AL S V + ++ + L + +G+ E N Sbjct: 166 AAGCYKLLKQTPNAIGFADDVTVALAYAVIDKSVEVNVKNLGASDFLGIGVQKGNKELLN 225 Query: 240 IVSWTH 245 +V+ Sbjct: 226 VVNDEL 231 >gi|108806624|ref|YP_650540.1| hypothetical protein YPA_0627 [Yersinia pestis Antiqua] gi|108812804|ref|YP_648571.1| hypothetical protein YPN_2643 [Yersinia pestis Nepal516] gi|145599631|ref|YP_001163707.1| hypothetical protein YPDSF_2359 [Yersinia pestis Pestoides F] gi|153949883|ref|YP_001401604.1| arginine ABC transporter periplasmic protein [Yersinia pseudotuberculosis IP 31758] gi|162419115|ref|YP_001606077.1| arginine ABC transporter periplasmic substrate-binding protein ArtJ [Yersinia pestis Angola] gi|166009726|ref|ZP_02230624.1| arginine ABC transporter, periplasmic substrate-binding protein ArtJ [Yersinia pestis biovar Antiqua str. E1979001] gi|166211812|ref|ZP_02237847.1| arginine ABC transporter, periplasmic substrate-binding protein ArtJ [Yersinia pestis biovar Antiqua str. B42003004] gi|167400025|ref|ZP_02305543.1| arginine ABC transporter, periplasmic substrate-binding protein ArtJ [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167424057|ref|ZP_02315810.1| arginine ABC transporter, periplasmic substrate-binding protein ArtJ [Yersinia pestis biovar Mediaevalis str. K1973002] gi|270487014|ref|ZP_06204088.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Yersinia pestis KIM D27] gi|294503332|ref|YP_003567394.1| hypothetical protein YPZ3_1222 [Yersinia pestis Z176003] gi|108776452|gb|ABG18971.1| hypothetical protein YPN_2643 [Yersinia pestis Nepal516] gi|108778537|gb|ABG12595.1| hypothetical protein YPA_0627 [Yersinia pestis Antiqua] gi|145211327|gb|ABP40734.1| hypothetical protein YPDSF_2359 [Yersinia pestis Pestoides F] gi|152961378|gb|ABS48839.1| arginine ABC transporter, periplasmic substrate-binding protein ArtJ [Yersinia pseudotuberculosis IP 31758] gi|162351930|gb|ABX85878.1| arginine ABC transporter, periplasmic substrate-binding protein ArtJ [Yersinia pestis Angola] gi|165991122|gb|EDR43423.1| arginine ABC transporter, periplasmic substrate-binding protein ArtJ [Yersinia pestis biovar Antiqua str. E1979001] gi|166207583|gb|EDR52063.1| arginine ABC transporter, periplasmic substrate-binding protein ArtJ [Yersinia pestis biovar Antiqua str. B42003004] gi|167050733|gb|EDR62141.1| arginine ABC transporter, periplasmic substrate-binding protein ArtJ [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056906|gb|EDR66669.1| arginine ABC transporter, periplasmic substrate-binding protein ArtJ [Yersinia pestis biovar Mediaevalis str. K1973002] gi|262361372|gb|ACY58093.1| hypothetical protein YPD4_1185 [Yersinia pestis D106004] gi|262365090|gb|ACY61647.1| hypothetical protein YPD8_0960 [Yersinia pestis D182038] gi|270335518|gb|EFA46295.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Yersinia pestis KIM D27] gi|294353791|gb|ADE64132.1| hypothetical protein YPZ3_1222 [Yersinia pestis Z176003] Length = 243 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 82/250 (32%), Gaps = 25/250 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L + F++ + L+ + F + AN + GFD Sbjct: 1 MKKLLLATL--LSGMAFSATAAE-----------TLRFAASATYPPFESMDANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + AL+ K+ D + D T R + F Sbjct: 48 MDLAKALCKQM---EANCTFTNQAFDSLIPALKFKRYDAVISGMDITPERSKQVA--FTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K S+ + L G I ++ GTT + L D + ++ + Sbjct: 103 PYYANSAIVIAPKG-KFSTFADLKGKKIGMENGTTHQKYLQDKHPE----IQTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + TN + + L A+ + Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPNLASVGEHVTDPQYFGTGLGIAVRPDNIALL 217 Query: 239 NIVSWTHYAM 248 ++ A+ Sbjct: 218 TKLNKAIDAV 227 >gi|189024049|ref|YP_001934817.1| Bacterial extracellular solute-binding protein, family 3 [Brucella abortus S19] gi|189019621|gb|ACD72343.1| Bacterial extracellular solute-binding protein, family 3 [Brucella abortus S19] Length = 262 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G F + +G GFDVD RAL + ++ ++ ALQ+ Sbjct: 29 KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 85 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152 + D + T R+ + F Y G K I + L+G +I VQ Sbjct: 86 GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 143 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT F + EE R DA D L T D Sbjct: 144 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 199 Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + D I + A +G E + A+ Sbjct: 200 CKMVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 239 >gi|83593586|ref|YP_427338.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC 11170] gi|83576500|gb|ABC23051.1| extracellular solute-binding protein, family 3 [Rhodospirillum rubrum ATCC 11170] Length = 263 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 81/251 (32%), Gaps = 10/251 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K IL T A + D + ++ F A G +GFD Sbjct: 4 MKKTATALFAAAGILLGGQAVTMALGVADARAE-TIRFATEGAFPPFNFTDAAGKPQGFD 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + ++ + + L +K+ D + + T R + F Sbjct: 63 IDIANALCAQL---KAECSMVTQDWDGIIPGLLAKKYDAIIASMSITPER--QQSVLFTD 117 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + F+ K K S + L G +I Q T + + D +++ Sbjct: 118 AYYNNQFHFVGPKGKDFDLSKAGLKGKAIGAQRATVSSQWIEDTL---GDTVSLNLYDTA 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 EE A R D D Y + + + +I + A+ + DT Sbjct: 175 EEAYLDLEAGRVDLLLNDTYPTYDWLNSPAGQAYELKGESVIKDDVVGIALRKDDTALAA 234 Query: 240 IVSWTHYAMVT 250 ++ ++ Sbjct: 235 KLNGALKEIIA 245 >gi|170701914|ref|ZP_02892840.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia ambifaria IOP40-10] gi|170133176|gb|EDT01578.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia ambifaria IOP40-10] Length = 260 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 91/255 (35%), Gaps = 21/255 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ + + +L ++ A K L G + F +G GFD Sbjct: 1 MKR--LIAAVSIALLAVSAGPAVA------KDWTTLHFGTDASYAPFESKAPDGKLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + +K +L + AL++K+ D + + T R +G F Sbjct: 53 IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITPQRAEQIG--FTT 107 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y ++ K + + L G SI V+ GTT E Y+ + + ++ Sbjct: 108 KIYNQPTRLVVKKGSPLLPTAESLKGKSIGVEQGTTQEAYAKAYWAKQG--ANVVSYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + A + R DA D L + R + + + + + + + D Sbjct: 166 DGVYADLTSGRLDAALQDEVQAAIGFLKSPRGAGYQFVGPELIDEKVLGIGAGIGLRKED 225 Query: 235 TEWYNIVSWTHYAMV 249 T+ + MV Sbjct: 226 TDLKAKIDRAILDMV 240 >gi|196037503|ref|ZP_03104814.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus NVH0597-99] gi|196031745|gb|EDX70341.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus NVH0597-99] Length = 265 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 74/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ +S + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELAEEVSKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSKPYVSSSAVLVIAKDKDKPATFADVKGLK-AAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 E + R D +T + L + ++ I+ S Sbjct: 170 EITNVEGFSQATELLNTGRVD-FTINDKLSVLNYLETKKDAKIKIVDTEKEASQSGFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G + V Sbjct: 229 KGSDKLVQEVDKAL 242 >gi|88601350|ref|YP_501528.1| extracellular solute-binding protein [Methanospirillum hungatei JF-1] gi|88186812|gb|ABD39809.1| amino acid ABC transporter substrate-binding protein, PAAT family [Methanospirillum hungatei JF-1] Length = 272 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 38/262 (14%), Positives = 87/262 (33%), Gaps = 26/262 (9%) Query: 1 MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46 M K ++ +L + + +++ GI+ Sbjct: 1 MDKKVVSVLITFFVLIGVCLCGCTEKPAEEKGAVVAPEATAAGSEEKPTYIVGIDGEYPP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 ++ + NG+ +GFDV+ + ++ + + ++ + ALQ+ +ID++ Sbjct: 61 YSFIDKNGEPQGFDVESVKWIADEMGFN---VKIQAMAWDGIIPALQAGKIDMVYSGMTI 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFK 165 T R+ + F + Q +H + ++GA + Q GTT D Sbjct: 118 TDERKEV--VNFSDPYWKVNQSVAVHDDSEFTMDDFMAGAGKVGAQRGTTGAFWAEDNLV 175 Query: 166 AHNMKYH--PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 ++ + ++ + + R D D + I+ +I + Sbjct: 176 NKSIMTADMLVTYDNFPLVATDLQNKRIDFAIYDRPPMLDAIAGKP----LHIIGEIDTG 231 Query: 224 SPLAPAIIQGDTEWYNIVSWTH 245 AI + DTE ++ Sbjct: 232 EEYGIAIRKTDTELLETMNEGL 253 >gi|319638303|ref|ZP_07993066.1| amino acid ABC transporter [Neisseria mucosa C102] gi|317400576|gb|EFV81234.1| amino acid ABC transporter [Neisseria mucosa C102] Length = 274 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 68/224 (30%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFFT--------------SFSTNASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L S + + S++ I +G + G Sbjct: 1 MLKKFVLGTIAAVVLAACGGEGSNSASSAPAQSGAASGSLIERINNKGTITVGTEGTYAP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 61 FTYHDKDGKLTGYDVEVTRAVADKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + K I S+ + G + KA Sbjct: 118 T-SPERQATFDKSEPYSWSGAVLVARKDSNIKSIDDIKGVKTAQSLTSNYGE------KA 170 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 171 KAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214 >gi|261218782|ref|ZP_05933063.1| extracellular solute-binding protein family 3 [Brucella ceti M13/05/1] gi|261321719|ref|ZP_05960916.1| extracellular solute-binding protein family 3 [Brucella ceti M644/93/1] gi|260923871|gb|EEX90439.1| extracellular solute-binding protein family 3 [Brucella ceti M13/05/1] gi|261294409|gb|EEX97905.1| extracellular solute-binding protein family 3 [Brucella ceti M644/93/1] Length = 282 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G F + +G GFDVD RAL + ++ ++ ALQ+ Sbjct: 49 KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 105 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152 + D + T R+ + F Y G K I + L+G +I VQ Sbjct: 106 GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 163 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT F + EE R DA D L T D Sbjct: 164 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 219 Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + D I + A +G E + A+ Sbjct: 220 CKMVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 259 >gi|308071441|ref|YP_003873046.1| Probable amino-acid ABC transporter binding protein yxeM precursor [Paenibacillus polymyxa E681] gi|305860720|gb|ADM72508.1| Probable amino-acid ABC transporter binding protein yxeM precursor [Paenibacillus polymyxa E681] Length = 269 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 76/239 (31%), Gaps = 10/239 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V+ + L ++ T + S + G FA + G+D Sbjct: 1 MKKSALVAAIGLSLVLLTGALSGCSSKDAASGDKVIYVGTQNDYPPFAFTNDKNELTGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ + + + D KI+++P FLAL S ++ +++ RE F Sbjct: 61 VEVVKEIDKKL--DGYKIEFVPSGWDAIFLALDSNKVQMIADEVAKNPEREK--KYLFSD 116 Query: 121 I-TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE- 177 + I+ K + I S+ L G + G + L Y + K + Sbjct: 117 ESYFSAQSVIIVKKGRTDIHSLKDLEGKKVAASVGDSYTQLLEQYNAKNGNKIILKYNDT 176 Query: 178 -RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + R DAY D A + + + + + + Sbjct: 177 GTSSDNLQDVQNGRVDAYVNDPVMTAA--TIKKEGLQVEAVGEPVQSDNINLVFKKDKQ 233 >gi|77459027|ref|YP_348533.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77383030|gb|ABA74543.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 273 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 81/259 (31%), Gaps = 23/259 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +++ + + ++ L + ++G L + F+ + GFD Sbjct: 1 MKTPTHLTLGLALAVSCSAAFA-GPTLDRVTQKGELTGVLMESYPPFSFLNDQNQLDGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ + ++ + + + DI + + R F Sbjct: 60 VDVAKAVAERLGVK---LKLETPSWDVIAAGRWNGRYDICVCSMTPSKARAEV--FDFPV 114 Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI----- 174 Y + K K I++ LSG + V + +T E L + P+ Sbjct: 115 EYYQSPAVIVVNAKDKDIATGKDLSGKKVGVISASTYEAYLNKDLVIEGAEDKPLSYPFD 174 Query: 175 -----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 ++ R DA + L + + I D + P Sbjct: 175 NVQIAPYDNETVAFQDLALGTGVRLDAMVTN---LITARERIAQDPRFKIAGDPLYAEPN 231 Query: 227 APAIIQGDTEWYNIVSWTH 245 A+ +GD +W V+ Sbjct: 232 VVAVEKGDPQWNAKVTEVI 250 >gi|75909655|ref|YP_323951.1| extracellular solute-binding protein [Anabaena variabilis ATCC 29413] gi|75703380|gb|ABA23056.1| amino acid ABC transporter substrate-binding protein, PAAT family [Anabaena variabilis ATCC 29413] Length = 271 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 101/248 (40%), Gaps = 12/248 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 +I+ ++ T + +A+ L +I++RG++ + L A G+ +G ++D Sbjct: 17 ILSAIIICWMISATGLAASAAELPEIQRRGYITVAVKDNLPLLGFKDAQGNLQGLEIDLA 76 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + L++ + ++ P+N ++R + + Q+D+ T R ++F Y Sbjct: 77 KRLAADLLGKADAVKLQPVNNRDRLPVVFNHQVDLAIARVTATESRSRL--VSFSVPYYM 134 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DG I + ++ L+ I V ++T + Y + + +E A Sbjct: 135 DGTYLITKDVS-VQQINDLATRKIAVLNNSSTIAEVRYYIPSA----ELVGVNSYQEAQA 189 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIVS 242 A + A+ D S L D P ++ +LP +S +PL+ + + E V+ Sbjct: 190 AIENNSVAAFAADGSLLSGW--VRDNP-QYRLLPTKLSTAPLSVVMPKGLQYDELRREVN 246 Query: 243 WTHYAMVT 250 + + Sbjct: 247 EAIASYIA 254 >gi|238917322|ref|YP_002930839.1| polar amino acid transport system substrate-binding protein [Eubacterium eligens ATCC 27750] gi|238872682|gb|ACR72392.1| polar amino acid transport system substrate-binding protein [Eubacterium eligens ATCC 27750] Length = 510 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 85/261 (32%), Gaps = 23/261 (8%) Query: 1 MYKD-----FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K+ +++L +I+ FT+ S S D R G + + +G+ Sbjct: 5 MAKNIRKAVLLLAMLSVIVGMFTACSNKKS--DD--GRTTFTVGFDAEFPPYGYKDDSGE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D + + + K P++ + + L S ID + RE Sbjct: 61 YVGFDLDLAQEVCERNGWNLVK---QPIDWDSKDMELSSGSIDCIWNGFTLNG-RER--E 114 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT------TTELTLADYFKAHNM 169 + + Q I+ GI + L G + VQA + T E + Sbjct: 115 YTWSKAYIDNSQVVIVKSGLGIKKLEDLKGKVVIVQADSSALAAFTGEDATEENLALAAQ 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + DA D+ A R ++ +L + +S Sbjct: 175 FKTLQQVSDYNSAFMNLESGSADAVCMDM--GVAKYQLEQRGNKFTMLDETVSSEQYGIG 232 Query: 230 IIQGDTEWYNIVSWTHYAMVT 250 G+T + V + M+ Sbjct: 233 FKLGNTALRDEVQTSLNDMLA 253 >gi|254713965|ref|ZP_05175776.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella ceti M644/93/1] gi|254716977|ref|ZP_05178788.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella ceti M13/05/1] Length = 262 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G F + +G GFDVD RAL + ++ ++ ALQ+ Sbjct: 29 KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 85 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152 + D + T R+ + F Y G K I + L+G +I VQ Sbjct: 86 GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 143 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT F + EE R DA D L T D Sbjct: 144 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 199 Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + D I + A +G E + A+ Sbjct: 200 CKMVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 239 >gi|229592163|ref|YP_002874282.1| putative histidine-binding periplasmic protein [Pseudomonas fluorescens SBW25] gi|229364029|emb|CAY51593.1| putative histidine-binding periplasmic protein precursor [Pseudomonas fluorescens SBW25] Length = 261 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 87/278 (31%), Gaps = 25/278 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L +L +F+ LK GI FA +G GFD Sbjct: 1 MKKLVLLGALALSVLSMQAFAEGKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + K ++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCKQM---DVKCTWVEQEFDGLIPALKVRKIDAILSSMSITEDRKK--SVDFTN 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M + +S L G I VQ G+ + + + + Sbjct: 106 RYYLSPAQLVMKEGTTVSDSLDELKGKKIGVQRGSIHDRFAKEVLAPKG--ATVVPYSSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233 EI A R D D + L L + + P + A+ +G Sbjct: 164 NEIYLDVEAGRLDGTVADATLLQDGFLKTPAGKGYAFVG-PQFTDPKYFGDGIGIAVRKG 222 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 D E + ++ A+ E Q +P Sbjct: 223 DKENLDRINAAIAAIRANGEYKKIQDKYFDFDIYGADP 260 >gi|15596457|ref|NP_249951.1| amino acid ABC transporter periplasmic binding protein [Pseudomonas aeruginosa PAO1] gi|218892766|ref|YP_002441635.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254234386|ref|ZP_04927709.1| hypothetical protein PACG_00230 [Pseudomonas aeruginosa C3719] gi|296390361|ref|ZP_06879836.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa PAb1] gi|9947192|gb|AAG04649.1|AE004555_9 amino acid ABC transporter periplasmic binding protein [Pseudomonas aeruginosa PAO1] gi|126166317|gb|EAZ51828.1| hypothetical protein PACG_00230 [Pseudomonas aeruginosa C3719] gi|218772994|emb|CAW28806.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 273 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 80/232 (34%), Gaps = 6/232 (2%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + A L DI + G L+C + A + GFDVD+C L+ A+ Sbjct: 17 CSLAGLAQADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKALDVKA 76 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 ++ +R AL S + D++ +T TL R ++G+ + + + + Sbjct: 77 EIVE---TPFPDRIPALVSGRADVIVASTSDTLERAKTIGM--SIPYFAFVKVVLTREDT 131 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAY 194 GI+S L G + AGT L L KA K ++ + A DA Sbjct: 132 GIASYEDLKGRPVGGTAGTFEALALEKDSKAWGDAKGSFRAYQSEADTALAISQGHIDAT 191 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + + +A + + N ++ Sbjct: 192 VVSSTVAASWIKSGKYKGLKIAGDAPYDIDYVALGAKRNEYGLLNYLNLFIN 243 >gi|188534835|ref|YP_001908632.1| Putative amino-acid ABC transporter, periplasmic amino acid-binding protein [Erwinia tasmaniensis Et1/99] gi|188029877|emb|CAO97761.1| Putative amino-acid ABC transporter, periplasmic amino acid-binding protein [Erwinia tasmaniensis Et1/99] Length = 257 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 36/246 (14%), Positives = 73/246 (29%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + ++ F+S + + L ++ G LK G F+ +G GFD Sbjct: 1 MKSIATLLLAGMVQFGFSSQALAETELAKVQSAGTLKIGTEGTYPPFSYHDTSGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R ++ + ++ L +++ D + T R F Sbjct: 61 VEIGREVAKRLNVKAE---FVEAKWDGLIAGLDARRYDAVINQVAITAPR--QQKYDFSV 115 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ I+S L G T+ LA + A + + Sbjct: 116 PYISSRAVLIVRSNNGAITSFDDLKGKKSA-HTLTSNFAQLATRYGA-----QVVGTDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R DA D Y + ++ I + + + + E Sbjct: 170 NQSVDLVASGRADATINDN-LSYLDFKKHKPDADVKIAATLPDAEDEGILLRKNNPELKA 228 Query: 240 IVSWTH 245 + Sbjct: 229 AIDKAI 234 >gi|148559050|ref|YP_001258837.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella ovis ATCC 25840] gi|260563889|ref|ZP_05834375.1| bacterial extracellular solute-binding protein, family 3 [Brucella melitensis bv. 1 str. 16M] gi|260757834|ref|ZP_05870182.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 4 str. 292] gi|260761657|ref|ZP_05874000.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 2 str. 86/8/59] gi|260883638|ref|ZP_05895252.1| extracellular solute-binding protein [Brucella abortus bv. 9 str. C68] gi|261213861|ref|ZP_05928142.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 3 str. Tulya] gi|261222047|ref|ZP_05936328.1| extracellular solute-binding protein [Brucella ceti B1/94] gi|261314392|ref|ZP_05953589.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis M163/99/10] gi|261317512|ref|ZP_05956709.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis B2/94] gi|261324969|ref|ZP_05964166.1| extracellular solute-binding protein [Brucella neotomae 5K33] gi|261752179|ref|ZP_05995888.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5 str. 513] gi|261758065|ref|ZP_06001774.1| bacterial extracellular solute-binding protein [Brucella sp. F5/99] gi|265988547|ref|ZP_06101104.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis M292/94/1] gi|265990961|ref|ZP_06103518.1| extracellular solute-binding protein family 3 [Brucella melitensis bv. 1 str. Rev.1] gi|265994798|ref|ZP_06107355.1| extracellular solute-binding protein [Brucella melitensis bv. 3 str. Ether] gi|265998012|ref|ZP_06110569.1| extracellular solute-binding protein family 3 [Brucella ceti M490/95/1] gi|265999502|ref|ZP_05466659.2| bacterial extracellular solute-binding protein [Brucella melitensis bv. 2 str. 63/9] gi|306840354|ref|ZP_07473123.1| extracellular solute-binding protein [Brucella sp. BO2] gi|148370307|gb|ABQ60286.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella ovis ATCC 25840] gi|260153905|gb|EEW88997.1| bacterial extracellular solute-binding protein, family 3 [Brucella melitensis bv. 1 str. 16M] gi|260668152|gb|EEX55092.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 4 str. 292] gi|260672089|gb|EEX58910.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 2 str. 86/8/59] gi|260873166|gb|EEX80235.1| extracellular solute-binding protein [Brucella abortus bv. 9 str. C68] gi|260915468|gb|EEX82329.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 3 str. Tulya] gi|260920631|gb|EEX87284.1| extracellular solute-binding protein [Brucella ceti B1/94] gi|261296735|gb|EEY00232.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis B2/94] gi|261300949|gb|EEY04446.1| extracellular solute-binding protein [Brucella neotomae 5K33] gi|261303418|gb|EEY06915.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis M163/99/10] gi|261738049|gb|EEY26045.1| bacterial extracellular solute-binding protein [Brucella sp. F5/99] gi|261741932|gb|EEY29858.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5 str. 513] gi|262552480|gb|EEZ08470.1| extracellular solute-binding protein family 3 [Brucella ceti M490/95/1] gi|262765911|gb|EEZ11700.1| extracellular solute-binding protein [Brucella melitensis bv. 3 str. Ether] gi|263001745|gb|EEZ14320.1| extracellular solute-binding protein family 3 [Brucella melitensis bv. 1 str. Rev.1] gi|263094346|gb|EEZ18191.1| bacterial extracellular solute-binding protein [Brucella melitensis bv. 2 str. 63/9] gi|264660744|gb|EEZ31005.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis M292/94/1] gi|306289675|gb|EFM60871.1| extracellular solute-binding protein [Brucella sp. BO2] Length = 282 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G F + +G GFDVD RAL + ++ ++ ALQ+ Sbjct: 49 KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 105 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152 + D + T R+ + F Y G K I + L+G +I VQ Sbjct: 106 GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 163 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT F + EE R DA D L T D Sbjct: 164 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 219 Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + D I + A +G E + A+ Sbjct: 220 CKMVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 259 >gi|330872824|gb|EGH06973.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 261 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 82/244 (33%), Gaps = 10/244 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + +A+ L D+ RG LK + F V + +G D+D + L+ + Sbjct: 17 MLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAQLLADQL---K 73 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++ P+N R L + ++D++ + RE + F Sbjct: 74 VKLELTPVNNTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFSRAYAPFYLAVFGPPDS 131 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + ++ L G +I V G ++ L+ FE AAY A + D Sbjct: 132 PVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDNNSTIAAYLAGQTDLIA 188 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + A ++ P L + SP+ + +G E V A L Sbjct: 189 SGNVVMAA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLGKVDEILNAAKADGALE 246 Query: 256 ITQK 259 + Sbjct: 247 KASQ 250 >gi|107100709|ref|ZP_01364627.1| hypothetical protein PaerPA_01001736 [Pseudomonas aeruginosa PACS2] Length = 273 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 80/232 (34%), Gaps = 6/232 (2%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + A L DI + G L+C + A + GFDVD+C L+ A+ Sbjct: 17 CSLAGLAQADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKALDVKA 76 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 ++ +R AL S + D++ +T TL R ++G+ + + + + Sbjct: 77 EIVE---TPFPDRIPALVSGRADVIVASTSDTLERAKTIGM--SIPYFAFVKVVLTREDT 131 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAY 194 GI+S L G + AGT L L +A K ++ + A DA Sbjct: 132 GIASYEDLKGRPVGGTAGTFEALALEKDSRAWGDAKGSFRAYQSEADTALAISQGHIDAT 191 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + + +A + + N ++ Sbjct: 192 VVSSTVAASWIKSGKYKGLKIAGDAPYDIDYVALGAKRNEYGLLNYLNLFIN 243 >gi|78043559|ref|YP_359362.1| glutamine ABC transporter glutamine-binding protein [Carboxydothermus hydrogenoformans Z-2901] gi|77995674|gb|ABB14573.1| glutamine ABC transporter, glutamine-binding protein [Carboxydothermus hydrogenoformans Z-2901] Length = 272 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 88/267 (32%), Gaps = 20/267 (7%) Query: 1 MYK---DFFVSILCLIILFFTSFSTNASILGDIKKRGF-------LKCGINTGLVGFAEV 50 M K F V +L L ++ + A + + + +T F Sbjct: 1 MKKFGALFLVVVLTLGLILTACGNKQAEQTNSAQNQEQKQEQKQKIVVASDTSYAPFEFQ 60 Query: 51 KAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 + G + GFD+D +A+ A+ + ++ +N ++QS +D T Sbjct: 61 DPSTGKYVGFDMDLIQAIGEAVGFE---VEIKSMNFDGVLTSVQSGTVDAAISAISITDK 117 Query: 110 REISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R+ + F Y G ++ I + L G + VQ TT + KA Sbjct: 118 RKEVM--NFSEPYYDSGLAIVVKGDNNTIKGIDDLKGKRVAVQIATTGADYANE-LKAKG 174 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + F + + R + DA D + S+ ++ D ++ Sbjct: 175 IVKEVKTFNTLPDALMELRNNGVDAVINDWPVNAYYIKQS--FSDLKMVGDKLTGESYGI 232 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ + E ++ + + + Sbjct: 233 AVPKSKPEILAKINEGLKKVKESGKYA 259 >gi|313106245|ref|ZP_07792494.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] gi|310878996|gb|EFQ37590.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] Length = 273 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 80/232 (34%), Gaps = 6/232 (2%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + A L DI + G L+C + A + GFDVD+C L+ A+ Sbjct: 17 CSLAGLAQADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCHDLAKALDVKA 76 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 ++ +R AL S + D++ +T TL R ++G+ + + + + Sbjct: 77 EIVE---TPFPDRIPALVSGRADVIVASTSDTLERAKTIGM--SIPYFAFVKVVLTREDT 131 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAY 194 GI+S L G + AGT L L KA K ++ + A DA Sbjct: 132 GIASYEDLKGRPVGGTAGTFEALALEKDSKAWGDAKGSFRAYQSEADTALAISQGHIDAT 191 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + + +A + + N ++ Sbjct: 192 VVSSTVAASWIKSGKYKGLKIAGDAPYDIDYVALGAKRNEYGLLNYLNLFIN 243 >gi|254689113|ref|ZP_05152367.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus bv. 6 str. 870] gi|260754611|ref|ZP_05866959.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 6 str. 870] gi|260674719|gb|EEX61540.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 6 str. 870] Length = 254 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G F + +G GFDVD RAL + ++ ++ ALQ+ Sbjct: 21 KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 77 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152 + D + T R+ + F Y G K I + L+G +I VQ Sbjct: 78 GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 135 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT F + EE R DA D L T D Sbjct: 136 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 191 Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + D I + A +G E + A+ Sbjct: 192 CKMVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 231 >gi|17987387|ref|NP_540021.1| arginine/ornithine-binding periplasmic protein precursor [Brucella melitensis bv. 1 str. 16M] gi|17983075|gb|AAL52285.1| arginine/ornithine-binding periplasmic protein precursor [Brucella melitensis bv. 1 str. 16M] Length = 251 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G F + +G GFDVD RAL + ++ ++ ALQ+ Sbjct: 18 KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 74 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152 + D + T R+ + F Y G K I + L+G +I VQ Sbjct: 75 GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 132 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT F + EE R DA D L T D Sbjct: 133 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 188 Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + D I + A +G E + A+ Sbjct: 189 CKMVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 228 >gi|315037815|ref|YP_004031383.1| glutamine-binding protein precursor [Lactobacillus amylovorus GRL 1112] gi|312275948|gb|ADQ58588.1| glutamine-binding protein precursor [Lactobacillus amylovorus GRL 1112] gi|327183109|gb|AEA31556.1| glutamine-binding protein precursor [Lactobacillus amylovorus GRL 1118] Length = 272 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 36/234 (15%), Positives = 85/234 (36%), Gaps = 10/234 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 L ++ ++ + G+ F +G +GF++D +AL+ + Sbjct: 19 TLSACGNKGKQNVYQKVETSKHIVWGVRADTRLFGLTNVKSGKIEGFEMDLAKALTKQML 78 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 ++ A R L++ +D + T R + F + G ++ Sbjct: 79 GKKGTASFVTTTANTRIPLLKNGNVDAVLATMTITPERAK--QVTFTKAYFPAGSSLLVP 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I++V L+ ++ GTT + + ++ + +A +A++ Sbjct: 137 NNSKITNVKDLNNKTVLAVKGTTAVDDVHKSAPKA----RVLQYDDYGQAMSALKANQGV 192 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 A T D L + + P + ++ + S +P A+ +G TE + ++ Sbjct: 193 ALTTDNGLLAGIAQ--ENPG-YKLVGGVYSDAPYGIAVNKGQTEMADHINKALK 243 >gi|323464072|gb|ADX76225.1| glutamine-binding periplasmic protein [Staphylococcus pseudintermedius ED99] Length = 486 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 90/258 (34%), Gaps = 23/258 (8%) Query: 1 MY---KDFFVSILCLIILFFT-----SFSTNASILGDIKKRGFLKCGINTGLVGFAE--- 49 M K + ++ + + + + + IK RG L+ G++ Sbjct: 1 MKYLGKLMTMMLIVVFSISGIPAKYDAQAASEDQWDVIKDRGELRVGLSADYAPMEFERT 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V ++ G D++ + ++ + K++ + + AL++ +ID++ T Sbjct: 61 VNGEREYAGIDIELAKKIAKD---NGVKLKIVNMQFDSLLGALKTGKIDMIISGMTPTAE 117 Query: 110 REISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ + F Q ++ K K ++ L+ I Q TT E + Sbjct: 118 RKK--EVDFSDNYMTVDQKVVVRKKDKDKYKTLKDLAHHRIGAQKQTTQEELAQKEIE-- 173 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 R+ E+ + ++++ DA D + A N+ SK A Sbjct: 174 --GADVQSLTRLPEVILSLKSNKVDAIVMDSAVGKAYLEQNEE-LTFSDASFADSKKQTA 230 Query: 228 PAIIQGDTEWYNIVSWTH 245 AI + + V+ + Sbjct: 231 IAIPKDSPKLLKRVNQSI 248 >gi|288905201|ref|YP_003430423.1| amino acid ABC transporter, substrate binding protein [Streptococcus gallolyticus UCN34] gi|288731927|emb|CBI13492.1| Putative amino acid ABC transporter, substrate binding protein [Streptococcus gallolyticus UCN34] Length = 280 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 36/258 (13%), Positives = 74/258 (28%), Gaps = 17/258 (6%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVK 51 M K + L L+ + +++ K G + G + V Sbjct: 1 MKFKKVLMGALALVSTLTLAACSSSSSKKATSTDQWDTYVKNGEITIGFDNTFVPMGYED 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G GFD+D A+ +++ +N + L + ID++ T R Sbjct: 61 EDGSNVGFDIDLANAVFKEYG---ITVKWQSINWDMKETELNNGTIDLIWNGYSITDERA 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHN 168 + F + Q + K GI+S + + + Q+G++ + K Sbjct: 118 E--KVLFTNPYMVNEQVLVTKKSSGITSFADMKDKVLGAQSGSSGYDAFTSNPEVLKDIV 175 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 +E + + R D D + I+ A Sbjct: 176 SGGDATQYETFTQALIDLKNDRIDGLLIDKVYANYYLEQEGELDNYNIISSEFDGEDFAV 235 Query: 229 AIIQGDTEWYNIVSWTHY 246 + D ++ Sbjct: 236 GARKADKTLVKKINQAFK 253 >gi|209516767|ref|ZP_03265618.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209502730|gb|EEA02735.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 260 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 89/251 (35%), Gaps = 21/251 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + V++ + + + S K+ ++ GI+ F + +G GFD Sbjct: 1 MKRSLKVAVAAVSMALACAASA--------KEWQTIRVGIDPTYPPFESLSTSGTVVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + +K ++ + LQ+++ D++ + T R + F Sbjct: 53 VDLGNALCTKL---KAKCVWVQSSFDGLIPGLQARKFDVILSSMAATAKR--REQIDFTD 107 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + I + G + ++L + VQ GT E + + A + ++ Sbjct: 108 RLYRNQTRLIAREGSGLLPDGAKLGHKRVAVQQGTVQETYAREKWAAAG--VEVVSYQNY 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 ++ A R DA D L +++ + A + + D Sbjct: 166 DQAYADLGTGRVDAVLMDAVQGKLGFLDTPSGKGFAFAGEVVYDPKIMGDGDAAGVRKSD 225 Query: 235 TEWYNIVSWTH 245 ++ + ++ Sbjct: 226 SDLRDALNVAI 236 >gi|62289808|ref|YP_221601.1| amino acid ABC transporter periplasmic-binding protein [Brucella abortus bv. 1 str. 9-941] gi|225852374|ref|YP_002732607.1| extracellular solute-binding protein family 3 [Brucella melitensis ATCC 23457] gi|254697246|ref|ZP_05159074.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus bv. 2 str. 86/8/59] gi|256031458|ref|ZP_05445072.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella pinnipedialis M292/94/1] gi|256254864|ref|ZP_05460400.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella ceti B1/94] gi|256257362|ref|ZP_05462898.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus bv. 9 str. C68] gi|62195940|gb|AAX74240.1| hypothetical amino-acid ABC transporter, periplasmic binding protein protein [Brucella abortus bv. 1 str. 9-941] gi|225640739|gb|ACO00653.1| extracellular solute-binding protein family 3 [Brucella melitensis ATCC 23457] Length = 262 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G F + +G GFDVD RAL + ++ ++ ALQ+ Sbjct: 29 KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 85 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152 + D + T R+ + F Y G K I + L+G +I VQ Sbjct: 86 GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 143 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT F + EE R DA D L T D Sbjct: 144 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 199 Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + D I + A +G E + A+ Sbjct: 200 CKMVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 239 >gi|165761002|pdb|2Q2A|A Chain A, Crystal Structures Of The Arginine-, Lysine-, Histidine- Binding Protein Artj From The Thermophilic Bacterium Geobacillus Stearothermophilus gi|165761003|pdb|2Q2A|B Chain B, Crystal Structures Of The Arginine-, Lysine-, Histidine- Binding Protein Artj From The Thermophilic Bacterium Geobacillus Stearothermophilus gi|165761004|pdb|2Q2A|C Chain C, Crystal Structures Of The Arginine-, Lysine-, Histidine- Binding Protein Artj From The Thermophilic Bacterium Geobacillus Stearothermophilus gi|165761005|pdb|2Q2A|D Chain D, Crystal Structures Of The Arginine-, Lysine-, Histidine- Binding Protein Artj From The Thermophilic Bacterium Geobacillus Stearothermophilus Length = 243 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 70/223 (31%), Gaps = 11/223 (4%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 + + G + F ++ G GFDVD A+ A D + F +L Sbjct: 10 KKKVVVGTDAAFAPFEYMQ-KGKIVGFDVDLLDAVMKAAGLDYE---LKNIGWDPLFASL 65 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152 QSK++D+ T R+ F + Q ++ + + + L G +I VQ Sbjct: 66 QSKEVDMGISGITITDERK--QSYDFSDPYFEATQVILVKQGSPVKNALDLKGKTIGVQN 123 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT + F H FE DA D + N Sbjct: 124 ATTGQEAAEKLF---GKGPHIKKFETTVVAIMELLNGGVDAVITDNAVANEYVKNNPNKK 180 Query: 213 EHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 VI P + + ++E V ++ + + Sbjct: 181 LQVIEDPKNFASEYYGMIFPK-NSELKAKVDEALKNVINSGKY 222 >gi|312795993|ref|YP_004028915.1| Histidine-binding protein [Burkholderia rhizoxinica HKI 454] gi|312167768|emb|CBW74771.1| Histidine-binding protein [Burkholderia rhizoxinica HKI 454] Length = 276 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 85/254 (33%), Gaps = 19/254 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F ++ ++ F S A I + G++ F A+G GFD+D Sbjct: 17 KKLFAAMSVAVVAFGASAGAYAKDWSTI------RFGVDASYPPFESKAADGKLVGFDID 70 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + + +K ++ N AL++++ D + + T R + F Sbjct: 71 LGNEICRRL---HAKCMWVENNFDGMIPALKARKFDGVLSSMTMTPQRAKQVA--FSAKL 125 Query: 123 YFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + + I + L G + V+ GT E Y+ + ++ ++ Sbjct: 126 FNTPTRLVAKVGSSIQPTPESLKGKRVGVEQGTIQETYAKTYWAPKG--VEVVPYQNQDQ 183 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTE 236 + A A R DA D L R + + + + + + DT+ Sbjct: 184 VYADLLAGRLDAALQDTVQADVGFLKTPRGKGYAFVGPGLQDEKTLGTGASIGLRKKDTD 243 Query: 237 WYNIVSWTHYAMVT 250 +++ M+ Sbjct: 244 LKVMINKAISDMLN 257 >gi|261380949|ref|ZP_05985522.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria subflava NJ9703] gi|284796208|gb|EFC51555.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria subflava NJ9703] Length = 274 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 68/224 (30%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFFT--------------SFSTNASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L S S + S++ I +G + G Sbjct: 1 MLKKFVLGSIAAVVLAACGGEGSNSASSTPAQSGSASGSLIERINNKGTITVGTEGTYAP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 61 FTYHDKDGKLTGYDVEVTRAVADKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + K I S+ + G + KA Sbjct: 118 T-SPERQATFDKSEPYSWSGAVLVARKDSNIKSIDDIKGVKTAQSLTSNYGE------KA 170 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 171 KAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214 >gi|209546711|ref|YP_002278629.1| family 3 extracellular solute-binding protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537955|gb|ACI57889.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 275 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 78/239 (32%), Gaps = 10/239 (4%) Query: 1 MYK-DFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++ LF + S A L +K G +K G T F + A G+ G Sbjct: 1 MRKNSLLKGLVGAAFLFGATISAHAADTLAAVKAAGTMKVGTETAFAPFDFIDA-GEHVG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +VD + + I+++ L F AL++ + D+++ T R F Sbjct: 60 LNVDLFNEIGKELGVK---IEWVTLPWDGVFPALEAGKFDVVAGPATITKKR--MERYRF 114 Query: 119 RPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 P + + I+ ++G I V T L ++ + K + Sbjct: 115 TPPLAEATIAILKKAGDQTINKPEDIAGKKIGVGKATAQLDQLKEFSETLPTKVDIREYP 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E A A R + + + V+LP KS ++ Sbjct: 175 AFTESYADLAAGRIAGVANSLPNIA-FVAKQREGTFEVVLPPFGKKSYFGFIGLKDADH 232 >gi|225870335|ref|YP_002746282.1| extracellular solute-binding protein [Streptococcus equi subsp. equi 4047] gi|225699739|emb|CAW93498.1| extracellular solute-binding protein [Streptococcus equi subsp. equi 4047] Length = 258 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 31/243 (12%), Positives = 76/243 (31%), Gaps = 14/243 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCR 65 ++ + L + S+ I+++G L ++ F V G D++ + Sbjct: 1 MVSVFALAACGQANKTSLQDRIQEKGKLVVAVSPDYAPFEFKALVDGKDTIVGADIELAQ 60 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++ + ++ +N +LQ+ ++DI +T R F Y Sbjct: 61 AIADELGVK---LELSAMNFDNVLSSLQTGKVDIAISGLSYTKERAKV--YDFSEAYYET 115 Query: 126 GQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 ++ ++ L G + VQ G+ E + + N + + E Sbjct: 116 ENAILVKASDAKHYANKDSLVGKKVAVQKGSIEEGLVKEQLNKANC----VSLTVMGEAI 171 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 ++ + A + + + A A+ +G + ++ Sbjct: 172 NELKSGQVQAVDLEAPVAAGFLAQHKDLALAPFKLQASDGDAKAVAMPKGSDDLRQTINK 231 Query: 244 THY 246 Sbjct: 232 VIK 234 >gi|78063101|ref|YP_373009.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77970986|gb|ABB12365.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 260 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 95/255 (37%), Gaps = 21/255 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ + + +L ++ A K ++ G + F +G GFD Sbjct: 1 MKR--LIAAVSIALLAVSAGPAVA------KDWTTIRFGTDASYAPFESKAPDGKLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + +K +L + AL++K+ D + + T R +G F Sbjct: 53 IDLGNEICARL---KAKCVWLENDFDGMIPALKAKKFDAVLSSMSITPQRAQQIG--FTT 107 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y ++ K + + L G SI V+ GTT E Y+ + + ++ Sbjct: 108 KIYNQPTRLVVKKGSPLLPTAESLKGKSIGVEQGTTQETYAKAYWGKQG--ANVVSYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPL----APAIIQGD 234 + + A + R DA D L + R + + + P+++ L + + D Sbjct: 166 DGVYADLTSGRLDAALQDEVQAAIGFLKSSRGANYTFVGPELVDDKVLGIGAGIGLRKED 225 Query: 235 TEWYNIVSWTHYAMV 249 T+ + MV Sbjct: 226 TDLKAKIDGAILDMV 240 >gi|255598562|ref|XP_002537036.1| Cystine-binding periplasmic protein precursor, putative [Ricinus communis] gi|223517731|gb|EEF25348.1| Cystine-binding periplasmic protein precursor, putative [Ricinus communis] Length = 271 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 70/226 (30%), Gaps = 10/226 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQ 79 + A +L +K RG L+ + F G G+DV+ R L++ + P Sbjct: 29 AHAADLLDTVKARGTLRIAMEGTYPPFNYKDKKTGQLTGYDVEVARLLAARMGLKPE--- 85 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++ L + + D++ T RE + + + S Sbjct: 86 FISTEWSAILAGLGAGKYDVIVAQVGITPKREATFDFSVPYTYSIPQLVVRNNDTTSYKS 145 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 ++ L G + V GT E L KA + E R DA D Sbjct: 146 LADLKGKKVGVGQGTVFEQQL----KAAPPGIDIKSYPATPETLQDLAFGRIDAALQDSL 201 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + L + P + S + +G+ ++ + Sbjct: 202 MVNYLVKNSHLP--LRGGARVGEISRMGIPFQKGNPKFKAALDKAI 245 >gi|310643433|ref|YP_003948191.1| amino acid abc transporter [Paenibacillus polymyxa SC2] gi|309248383|gb|ADO57950.1| amino acid ABC transporter [Paenibacillus polymyxa SC2] Length = 283 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 46/272 (16%), Positives = 74/272 (27%), Gaps = 39/272 (14%) Query: 1 MYK-DFFVSILCLIILFFTSFS-------------------------TNASILGDIKKRG 34 M K F + ++ L ++ T A+ L +K G Sbjct: 1 MRKFSFLPIVFIVMALLVSACGNNDKGAGTNNASTGENGSNNGKADTTAAATLESVKASG 60 Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ G F A G GFDVD +S + P ++ F L S Sbjct: 61 KLRIGTEGTYAPFTYHDAAGKLTGFDVDIATEVSKRLGVQPE---FIETQWDGIFAGLNS 117 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAG 153 K+ D + T R+ F + I S L G Sbjct: 118 KRFDAVFNEVSITDERK--QKYDFSDPYIVSKAVLIVSEDNTDIQKFSDLKGKKAG---- 171 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 + L K++ + E + + R DA D + LK Sbjct: 172 QSLTSNLTQIAKSNG--AEIVATEGFNQAIDLLTSKRVDATVNDGLSYLDLKKQKPDAP- 228 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + S A +G + V+ Sbjct: 229 IKKVDESADASHSAAVFNKGSEDLIKAVNKAL 260 >gi|260102963|ref|ZP_05753200.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] gi|260083248|gb|EEW67368.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] gi|328463862|gb|EGF35396.1| amino acid ABC transporter, amino acid-binding protein [Lactobacillus helveticus MTCC 5463] Length = 267 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 84/233 (36%), Gaps = 7/233 (3%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 L + S N I+K + G++ V K NG G+D+D RA+ Sbjct: 15 TLTGCAKSNNPDSWQTIEKNKQVVIGLDDSFVPMGFEKKNGQLTGYDIDLARAVFKEYG- 73 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 K+ + ++ L++ ID++ T R+ +AF + Q ++ K Sbjct: 74 --IKVSFQTIDWSMNVTELRNGTIDLIWNGYSITPERKK--KVAFSRPYLRNRQVLVVKK 129 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 GI SV+Q+ + +Q G+T E + K + ++ + + R Sbjct: 130 NSGIDSVAQMKKYELGMQTGSTAEQWYETKQNVLHAKKTIL-YDTISNSFLDLNSGRIQG 188 Query: 194 YTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWYNIVSWTH 245 D + SE+ ++ D + A + +GD ++ Sbjct: 189 ILLDEVYADYYIAHMVKSSEYKVIQNDRVPFDEFAVGMRKGDKTLQKKLNEGL 241 >gi|262043355|ref|ZP_06016483.1| lysine/arginine/ornithine ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039307|gb|EEW40450.1| lysine/arginine/ornithine ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 260 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 97/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L++ ++ S A++ I + G + F+ A GD+ GFD Sbjct: 1 MKKTIL--ALSLLVGMSSTASVFAALPQSI------RIGTDATYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L S I K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNELCSRI---KVKCTWVGSDFDSLIPSLKAKKIDAIISSLSITEKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I ++ L G + V G+T E D +++ + + ++ Sbjct: 108 KLYAADSRLIAAKGSPIQPTLEALKGKHVGVLQGSTQEAYANDRWRSQGVD--VVAYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + A R DA D A L + + + + D Sbjct: 166 DLIYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGPSVKDKKYFGDGTGIGLRKED 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E E+ ++++K + +V Sbjct: 226 AELKAAFDKAL------GEMRKDGT-YDKMAKKYFDFNV 257 >gi|49082912|gb|AAT50856.1| PA0888 [synthetic construct] Length = 260 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 88/254 (34%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L +L +F+ + ++ GI F+ +G GFD Sbjct: 1 MKKLALLGALALSVLSLPTFAADKP----------VRIGIEAAYPPFSLKTPDGQLAGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + +++ AL+ ++ID + + T R+ + F Sbjct: 51 VDIGNALCEEM---KVQCKWVEQEFDGLIPALKVRKIDAILSSMTITDERKR--SVDFTN 105 Query: 121 ITYFDGQGFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y F+M + ++ L G V G+T + + + + Sbjct: 106 KYYNTPVRFVMKEGASLNDPKADLKGKKAGVLRGSTADRYASAELTPAG--VEVVRYNSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +E + A R DA D L L D + + ++ + A+ +GD Sbjct: 164 QEANMDLVAGRLDAVVADSVNLEDGFLKTDAGKGYAFVGPQLTDAKYFGEGVGIAVRKGD 223 Query: 235 TEWYNIVSWTHYAM 248 +E + A+ Sbjct: 224 SELAGKFNAAIDAL 237 >gi|134288194|ref|YP_001110357.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134132844|gb|ABO59554.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia vietnamiensis G4] Length = 255 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 86/257 (33%), Gaps = 26/257 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L + K ++ G F +G GFD Sbjct: 1 MKKLAISVALALAATSVYA-----------KDWKEIRFGTEPTSPPFESKAIDGKLVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + + +K ++ + AL++K+ D + + T R +AF Sbjct: 50 IDLGNAICAKL---KAKCVWVENDFDGMIPALKAKKFDGILASMTVTEKR--MQEIAFSD 104 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K G + + L G + V+ GT E ++++ + ++ Sbjct: 105 KIYNTPTRLVTKKGSGLLPIATSLKGKRVGVEQGTIQETYAKAHWESAG--VNVTSYQNQ 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL------APAIIQG 233 + + ++ R DA+ D A L + + P A + + Sbjct: 163 DLVYQDMQSGRLDAFLQDAIAADLGFLKTPKGHDFAFAG-PNLDDPSTLGTGAAIGLRKE 221 Query: 234 DTEWYNIVSWTHYAMVT 250 D + ++ A++T Sbjct: 222 DVDLRQAINMALAAIMT 238 >gi|310768019|gb|ADP12969.1| ABC lysine/arginine/ornithine transporter, periplasmic ligand binding protein [Erwinia sp. Ejp617] Length = 264 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 87/249 (34%), Gaps = 19/249 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + L ++ S + A I++ ++ ++ F G+ GFD Sbjct: 4 MERATVGKLAALALMSSCSLTAQA----KIEQ---VRFAVDASYPPFESKTPKGELVGFD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + ++ AL++++ D + + T R + P Sbjct: 57 IDLGNALCTQM---QANCVWVESQFDGMIPALKARKFDAILSDMGITEERLKQINFT-VP 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q + + L G ++ VQ GT E ++ H + + + Sbjct: 113 LYDTHTQLIARKGSGLLPDAASLKGKNVGVQQGTVQERYALAKWQPHG--VNVVAYGDQA 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 +++ + R D D + L + + + L I + P+ A + +GD Sbjct: 171 QVENDLVSGRLDVVFTDAAQAAIGFLKHPQGQDF-ELAGPIVQDPIIGPGTAIGLRKGDD 229 Query: 236 EWYNIVSWT 244 E + Sbjct: 230 ELKTALDNA 238 >gi|15891686|ref|NP_357358.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15160140|gb|AAK90143.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 300 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 103/285 (36%), Gaps = 11/285 (3%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + S + L I + G ++ G + F+ + + G+ ++ C ++ +I Sbjct: 18 VAAASDNAQPPTLETIARTGTIRLGFADRNIPFSYLGTGPEPIGYSIELCLRVADSIKRK 77 Query: 75 ----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 K++++ R + L ID+ + T R + F + G ++ Sbjct: 78 LALPELKVEFVKRTPSNRIMLLNDGTIDMECVASTNTEERRK--AVWFSYSHFITGTRYV 135 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 K G+++V+ L+G ++ V GT L + M + + E +R Sbjct: 136 ALKSSGLNTVADLAGRTVVVTTGTINISQLNVLNRKLGMNIAVLQNDSTEGSFDMVTENR 195 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 A+ D L + RP ++VI + + P + GDT + + V+ + Sbjct: 196 ASAFVMDDILLRSFIAETGRPEDYVISNEYLAPPQPYGLMLRHGDTGFRDAVNEALGQIY 255 Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294 + E+ +++R L ++ EA D Sbjct: 256 QSGEIEKIYDKWFNAPIPPNGINLKRPL----PGDLAEAFRSPVD 296 >gi|325956290|ref|YP_004286900.1| glutamine-binding protein [Lactobacillus acidophilus 30SC] gi|325332855|gb|ADZ06763.1| glutamine-binding protein precursor [Lactobacillus acidophilus 30SC] Length = 272 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 36/234 (15%), Positives = 84/234 (35%), Gaps = 10/234 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 L ++ ++ + G+ F +G +GF++D +AL+ + Sbjct: 19 TLSACGNKGKQNVYQKVETSKHIVWGVRADTRLFGLTNVKSGKIEGFEMDLAKALTKQML 78 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 ++ A R L++ +D + T R + F + G ++ Sbjct: 79 GKKGTASFVTTTANTRIPLLKNGNVDAVLATMTITPERAK--QVTFTKAYFPAGSSLLVP 136 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I++V L+ ++ GTT + + ++ + +A +A++ Sbjct: 137 NNSKITNVKDLNNKTVLAVKGTTAVDDVHKSAPKA----RVLQYDDYGQAMSALKANQGV 192 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 A T D L + N + ++ + S +P A+ +G TE + ++ Sbjct: 193 ALTTDNGLLAGIAQENKG---YKLVGGVYSDAPYGIAVNKGQTEMADHINKALK 243 >gi|255066533|ref|ZP_05318388.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria sicca ATCC 29256] gi|255049117|gb|EET44581.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria sicca ATCC 29256] Length = 280 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 82/227 (36%), Gaps = 10/227 (4%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K + N F + + G+ +GFDVD A++ A K+++ F Sbjct: 34 KADKVYRVAANAEFAPFESLDSAGNVEGFDVDLMNAMAKAGG---FKVEFKHQPWDSLFP 90 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SIC 149 AL++ DI+ T R+ + F + Q ++ K K ++S L + Sbjct: 91 ALKNGDTDIVISGVTITDERK--QSMDFTDPYFEITQVVLVPKGKKVASSDDLKNMAKVG 148 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V G T + +++ N FE V + DA D + + N Sbjct: 149 VVTGQTGDFSVSKLLG--NDNPKIARFESVPLVIKELENGGVDAVVSDSAVIANYVKNNP 206 Query: 210 -RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + + LPD + A+ +GD +++ + + E Sbjct: 207 TKSMDFITLPD-FTIENYGIAVRKGDEATVKMLNEALKKVRDSGEYD 252 >gi|91778422|ref|YP_553630.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|91691082|gb|ABE34280.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 274 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 81/249 (32%), Gaps = 17/249 (6%) Query: 3 KDFFVSILC------LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 + F ++ L L + +A L I K G ++ G+ F + + Sbjct: 12 RRVFATLAATLAFTGLGALCALPSAAHADALDTIAKSGTVRIGVFEDYPPFGSIGPDMKP 71 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G+D+D + A+ +K++ +P+ R L + D+L T RE + Sbjct: 72 MGYDIDVANLIGKAL---NAKVELVPVTGDNRMAYLADHKADMLLS-VGQTPEREKV--I 125 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F K + + + L+G SI V GT +L++ + F Sbjct: 126 DFSQPYAPYYLAVFGPKALPVKNAADLAGKSISVARGTLEDLSVTKIAP---PTANIKRF 182 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +A+ + + + P+ + SP + + + Sbjct: 183 DDPNGAISAFLSGQVQLMVVGNDVGATILAR--HPANDPEQKFSLFSSPDHVGLNKNEPR 240 Query: 237 WYNIVSWTH 245 V T Sbjct: 241 LKQKVDETI 249 >gi|327438994|dbj|BAK15359.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Solibacillus silvestris StLB046] Length = 266 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 34/274 (12%), Positives = 77/274 (28%), Gaps = 25/274 (9%) Query: 1 MYKDFFVSILCLIILFFTS-------FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K + L ++L S + L +I+ G ++ G+ F+ + Sbjct: 1 MKKLLSIVTLSALVLAACGGDKSDENASEAKNKLEEIQADGKIQIGLEGTFPPFSFHDES 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+ + ++ + + Y+ L + + D + N T R+ Sbjct: 61 GALTGFEYEIADQIAKDLGVEAE---YVETKWDSLIAGLDTDKYDFVINNVSITDERKE- 116 Query: 114 LGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F + I + + G + T A +A Sbjct: 117 -KYDFSVPYMKSEAVVAVHTDNTEIKEPADMKGKK----SSQTITSNFARDAEALG--AE 169 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + + R D D ++ +L I+ + +A + + Sbjct: 170 VVATNDLMSSIELVVQGRADGTIHDRVTFLTYLQEQPD-TKLKVLDGAINSTDIALILNK 228 Query: 233 GDTEWYNIVSWTHY-----AMVTAEELGITQKNI 261 + E+ ++ A +N+ Sbjct: 229 ENDEFREKLNEIIKERTEDGTFEAISEKYFGENV 262 >gi|239928983|ref|ZP_04685936.1| secreted protein [Streptomyces ghanaensis ATCC 14672] Length = 348 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 86/256 (33%), Gaps = 18/256 (7%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 ++ + I+ +G +K G + +G G D D AL + Sbjct: 75 TASTSAAPLADKLPQAIRDKGVVKVGSDIAYAPVEFKDDSGKTVGIDPDVAAALGKQLGV 134 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL----------GLAFRPITY 123 ++ L+SK+ DI T R+ + G+ F + Sbjct: 135 K---FEFENGTFDTLITGLRSKRYDIAMSAMTDTKDRQEGIDSETGKKVGEGVDFVD-YF 190 Query: 124 FDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPIVFERV 179 G K +GI + S L G I VQ GT +E + K F+ Sbjct: 191 TAGVSIYTKKGDDQGIKTWSDLCGKKIVVQRGTVSEDLAKAENEKCPTGKKIAIEAFDND 250 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ RA +A + D T+ ++ ++ + + +P AI + +T+ + Sbjct: 251 QQAQTRLRAGGANAGSSDFPVAAYAVKTSGGGNDFQLVGEQVEAAPYGIAIAKDNTQLRD 310 Query: 240 IVSWTHYAMVTAEELG 255 + A++ E Sbjct: 311 AIKAALDAIIENGEYQ 326 >gi|256832817|ref|YP_003161544.1| extracellular solute-binding protein family 3 [Jonesia denitrificans DSM 20603] gi|256686348|gb|ACV09241.1| extracellular solute-binding protein family 3 [Jonesia denitrificans DSM 20603] Length = 278 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 78/217 (35%), Gaps = 7/217 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L GI G ++ GFDVD R ++ + ++++ + R L+ Sbjct: 36 TLTIGIKFDQPGLGFKDGE-EYTGFDVDVARYVADKLGYAEEDVEFVEAISANRETMLEG 94 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAG 153 Q+D++ T R+ + F + GQ ++ + + L G ++C +G Sbjct: 95 DQVDMIFATYSITEERDEV--VDFAGPYFVAGQDLLVRADETDITGPDTLEGKNLCSVSG 152 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T+ + D + + + E + + + DA T D L L + Sbjct: 153 STSAQRVKDTYD-QGTGINLVEQPGYSECLSLLTSGQVDAVTTDDIILAGLAA-EEGSGA 210 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 ++ + S+ I +G + ++ M Sbjct: 211 MKVVGNPFSEERYGVGIPEGSDQC-QAINDALTDMFE 246 >gi|206580482|ref|YP_002237298.1| lysine-arginine-ornithine-binding periplasmic protein [Klebsiella pneumoniae 342] gi|238895829|ref|YP_002920565.1| lysine-, arginine-, ornithine-binding periplasmic protein [Klebsiella pneumoniae NTUH-K2044] gi|288934233|ref|YP_003438292.1| cationic amino acid ABC transporter periplasmic binding protein [Klebsiella variicola At-22] gi|329997348|ref|ZP_08302731.1| lysine/arginine/ornithine ABC transporter [Klebsiella sp. MS 92-3] gi|206569540|gb|ACI11316.1| lysine-arginine-ornithine-binding periplasmic protein [Klebsiella pneumoniae 342] gi|238548147|dbj|BAH64498.1| lysine-, arginine-, ornithine-binding periplasmic protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288888962|gb|ADC57280.1| cationic amino acid ABC transporter, periplasmic binding protein [Klebsiella variicola At-22] gi|328539097|gb|EGF65133.1| lysine/arginine/ornithine ABC transporter [Klebsiella sp. MS 92-3] Length = 260 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 97/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L++ ++ S A++ I + G + F+ A GD+ GFD Sbjct: 1 MKKTIL--ALSLLVGMSSTASVFAALPQSI------RIGTDATYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L S I K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNELCSRI---KVKCTWVGSDFDSLIPSLKAKKIDAIISSLSITEKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I ++ L G + V G+T E D +++ + + ++ Sbjct: 108 KLYAADSRLIAAKGSPIQPTLEALKGKHVGVLQGSTQEAYANDRWRSQGVD--VVAYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + A R DA D A L + + + + D Sbjct: 166 DLIYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGPSVKDKKYFGDGTGIGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E E+ ++++K + +V Sbjct: 226 AELKAAFDKAL------GEMRKDGT-YDKMAKKYFDFNV 257 >gi|170770021|ref|ZP_02904474.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia albertii TW07627] gi|218548382|ref|YP_002382173.1| arginine ABC transporter periplasmic-binding protein [Escherichia fergusonii ATCC 35469] gi|170121087|gb|EDS90018.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia albertii TW07627] gi|218355923|emb|CAQ88538.1| arginine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|323967298|gb|EGB62721.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli M863] gi|323976752|gb|EGB71840.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TW10509] gi|324112655|gb|EGC06631.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia fergusonii B253] gi|325496805|gb|EGC94664.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia fergusonii ECD227] gi|327253650|gb|EGE65279.1| arginine-binding periplasmic protein 1 [Escherichia coli STEC_7v] Length = 243 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 84/249 (33%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESMDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ +++D + D T RE + F Sbjct: 48 VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVDAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTH 245 + Sbjct: 216 LQQKFNTAL 224 >gi|165761009|pdb|2Q2C|B Chain B, Crystal Structures Of The Arginine-, Lysine-, Histidine- Binding Protein Artj From The Thermophilic Bacterium Geobacillus Stearothermophilus Length = 234 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 69/222 (31%), Gaps = 11/222 (4%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 + G + F ++ G GFDVD A+ A D + F +LQ Sbjct: 1 KKVVVGTDAAFAPFEYMQ-KGKIVGFDVDLLDAVMKAAGLDYE---LKNIGWDPLFASLQ 56 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 SK++D+ T R+ F + Q ++ + + + L G +I VQ Sbjct: 57 SKEVDMGISGITITDERK--QSYDFSDPYFEATQVILVKQGSPVKNALDLKGKTIGVQNA 114 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT + F H FE DA D + N Sbjct: 115 TTGQEAAEKLF---GKGPHIKKFETTVVAIMELLNGGVDAVITDNAVANEYVKNNPNKKL 171 Query: 214 HVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 VI P + + ++E V ++ + + Sbjct: 172 QVIEDPKNFASEYYGMIFPK-NSELKAKVDEALKNVINSGKY 212 >gi|165761008|pdb|2Q2C|A Chain A, Crystal Structures Of The Arginine-, Lysine-, Histidine- Binding Protein Artj From The Thermophilic Bacterium Geobacillus Stearothermophilus gi|165761010|pdb|2Q2C|C Chain C, Crystal Structures Of The Arginine-, Lysine-, Histidine- Binding Protein Artj From The Thermophilic Bacterium Geobacillus Stearothermophilus gi|165761011|pdb|2Q2C|D Chain D, Crystal Structures Of The Arginine-, Lysine-, Histidine- Binding Protein Artj From The Thermophilic Bacterium Geobacillus Stearothermophilus Length = 233 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 69/222 (31%), Gaps = 11/222 (4%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 + G + F ++ G GFDVD A+ A D + F +LQ Sbjct: 1 KKVVVGTDAAFAPFEYMQ-KGKIVGFDVDLLDAVMKAAGLDYE---LKNIGWDPLFASLQ 56 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 SK++D+ T R+ F + Q ++ + + + L G +I VQ Sbjct: 57 SKEVDMGISGITITDERK--QSYDFSDPYFEATQVILVKQGSPVKNALDLKGKTIGVQNA 114 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT + F H FE DA D + N Sbjct: 115 TTGQEAAEKLF---GKGPHIKKFETTVVAIMELLNGGVDAVITDNAVANEYVKNNPNKKL 171 Query: 214 HVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 VI P + + ++E V ++ + + Sbjct: 172 QVIEDPKNFASEYYGMIFPK-NSELKAKVDEALKNVINSGKY 212 >gi|300858066|ref|YP_003783049.1| glutamate ABC transporter substrate-binding protein [Corynebacterium pseudotuberculosis FRC41] gi|300685520|gb|ADK28442.1| glutamate ABC transport system substrate-binding protein [Corynebacterium pseudotuberculosis FRC41] gi|302205788|gb|ADL10130.1| glutamate-binding protein GluB [Corynebacterium pseudotuberculosis C231] gi|302330347|gb|ADL20541.1| glutamate-binding protein GluB [Corynebacterium pseudotuberculosis 1002] gi|308276023|gb|ADO25922.1| glutamate-binding protein GluB [Corynebacterium pseudotuberculosis I19] Length = 293 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 93/287 (32%), Gaps = 27/287 (9%) Query: 1 MYKDF--FVSILCLIILFFTSFSTN-------ASILGDIKKRGFLKCGINTGLVGFAEVK 51 M + F+ + +L T+ + A +LG I + G + G G + Sbjct: 1 MIRTSTRFLGASAIALLSATTLAACGGNNNDGAGLLGHI-ESGQVTLGTKFDQPGLGMKE 59 Query: 52 ANGDWKGFDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 A+G G DVD ++ +++ + +R +Q+ ++D+++ Sbjct: 60 ASGGMSGLDVDIAQYVVNHIADTKGWKHPDVEWRETPSAQRESLIQNGEVDLIAATYSIN 119 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQL-SGASICVQAGTTTELTLADYFK 165 R + + F Q + K I V L G +C +G+T + + Sbjct: 120 KSRAET--VNFGGPYLLTHQALLTRKDDAGIKEVKDLEHGKILCSVSGSTPAQKVKESLP 177 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP----SEHVILPDII 221 ++ A R DA T D + L N+ Sbjct: 178 ----GVQLQEYDTYSSCVEALRQGNVDALTTDATILNGYAQQNEGSFKVVEMFKEDQTPY 233 Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKD 267 + + + D E V+ + ++ E + +KN+ + Sbjct: 234 TDEYYGIGLKKDDAEATKAVNEALNQLNSSGEFEKLVKKNLGDAAAG 280 >gi|291530246|emb|CBK95831.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Eubacterium siraeum 70/3] Length = 294 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 59/304 (19%), Positives = 112/304 (36%), Gaps = 35/304 (11%) Query: 1 MYKDFFVSILCLIIL------FFTSFSTNAS--------------ILGDIKKRGFLKCGI 40 M K F ++ L + FT+ STNA+ L +IK G + G+ Sbjct: 1 MKKLNFKKLIALGLTAAAAVASFTACSTNATSGGSDGNTGSKVYRTLDEIKASGKINIGV 60 Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 + F V NG+++G+D+ F L + + I Y+ A R L++ ++DI+ Sbjct: 61 FSDKNPFGYVDENGEYQGYDIYFANRLGKDLGVE---INYVSTEAANRVEYLETGKVDII 117 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELT 159 N T R + F G + I+S+ + + + V +GTT EL Sbjct: 118 LANFTVTEERAE--KVDFALPYMNVALGVVSPDSNVITSLDNWKAEDKMIVISGTTAELY 175 Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 L + ++ +A A+ D + + A V + Sbjct: 176 LT----KNYPDIKLQKYDSYATAKSAIENGNGVAWANDNTEVIAFAKQ--NKGYTVGIDS 229 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279 + S+ +APA+ +G+ N ++ + + + + DT D + L + Sbjct: 230 LGSQDTIAPAVSKGNETLLNWINDEIKTL---GKENFFHADYDATLTDTYGADYKETLVV 286 Query: 280 DKSS 283 + Sbjct: 287 EGGE 290 >gi|242239986|ref|YP_002988167.1| cationic amino acid ABC transporter periplasmic protein [Dickeya dadantii Ech703] gi|242132043|gb|ACS86345.1| cationic amino acid ABC transporter, periplasmic binding protein [Dickeya dadantii Ech703] Length = 259 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 96/279 (34%), Gaps = 29/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L+ T+ L D+ K +K G + F A+G+ GFD Sbjct: 1 MKKMLKLLPLALVFATGTA-------LADVPKN--IKIGTDPTYAPFESKNASGELVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + L I + ++ + +L++K+ID + + T R +AF Sbjct: 52 IDLAKELCKRI---AANCTFVESDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFTD 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V +T E Y++ + + ++ Sbjct: 107 KLYAANARLIAKKGSTIQPSVDSLKGKRVGVLQASTQEAYANQYWQPKGID--VVAYQNQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I A A R D D A L D + + L + + + Sbjct: 165 DLIYADLTAGRIDTAFQDEVAGSEGFLKQDAGKAYAFAGPAVKDDKLFGVGTGMGLRKNE 224 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE + +A + ++++K + +V Sbjct: 225 TELKVALDKA-FASIR------KDGTYDKLAKKYFDFNV 256 >gi|15596085|ref|NP_249579.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa PAO1] gi|107100346|ref|ZP_01364264.1| hypothetical protein PaerPA_01001371 [Pseudomonas aeruginosa PACS2] gi|116048812|ref|YP_792388.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa UCBPP-PA14] gi|218893143|ref|YP_002442012.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa LESB58] gi|254239241|ref|ZP_04932564.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa C3719] gi|254245175|ref|ZP_04938497.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa 2192] gi|296390758|ref|ZP_06880233.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa PAb1] gi|313105771|ref|ZP_07792034.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa 39016] gi|9946788|gb|AAG04277.1|AE004523_5 arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa PAO1] gi|2668595|gb|AAC71070.1| arginine and ornithine binding protein [Pseudomonas aeruginosa PAO1] gi|115584033|gb|ABJ10048.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa UCBPP-PA14] gi|126171172|gb|EAZ56683.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa C3719] gi|126198553|gb|EAZ62616.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa 2192] gi|218773371|emb|CAW29183.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa LESB58] gi|310878536|gb|EFQ37130.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa 39016] Length = 259 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 88/254 (34%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L +L +F+ + ++ GI F+ +G GFD Sbjct: 1 MKKLALLGALALSVLSLPTFAADKP----------VRIGIEAAYPPFSLKTPDGQLAGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + +++ AL+ ++ID + + T R+ + F Sbjct: 51 VDIGNALCEEM---KVQCKWVEQEFDGLIPALKVRKIDAILSSMTITDERKR--SVDFTN 105 Query: 121 ITYFDGQGFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y F+M + ++ L G V G+T + + + + Sbjct: 106 KYYNTPARFVMKEGASLNDPKADLKGKKAGVLRGSTADRYASAELTPAG--VEVVRYNSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +E + A R DA D L L D + + ++ + A+ +GD Sbjct: 164 QEANMDLVAGRLDAVVADSVNLEDGFLKTDAGKGYAFVGPQLTDAKYFGEGVGIAVRKGD 223 Query: 235 TEWYNIVSWTHYAM 248 +E + A+ Sbjct: 224 SELAGKFNAAIDAL 237 >gi|291437322|ref|ZP_06576712.1| secreted protein [Streptomyces ghanaensis ATCC 14672] gi|291340217|gb|EFE67173.1| secreted protein [Streptomyces ghanaensis ATCC 14672] Length = 368 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 86/256 (33%), Gaps = 18/256 (7%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 ++ + I+ +G +K G + +G G D D AL + Sbjct: 95 TASTSAAPLADKLPQAIRDKGVVKVGSDIAYAPVEFKDDSGKTVGIDPDVAAALGKQLGV 154 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL----------GLAFRPITY 123 ++ L+SK+ DI T R+ + G+ F + Sbjct: 155 K---FEFENGTFDTLITGLRSKRYDIAMSAMTDTKDRQEGIDSETGKKVGEGVDFVD-YF 210 Query: 124 FDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPIVFERV 179 G K +GI + S L G I VQ GT +E + K F+ Sbjct: 211 TAGVSIYTKKGDDQGIKTWSDLCGKKIVVQRGTVSEDLAKAENEKCPTGKKIAIEAFDND 270 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ RA +A + D T+ ++ ++ + + +P AI + +T+ + Sbjct: 271 QQAQTRLRAGGANAGSSDFPVAAYAVKTSGGGNDFQLVGEQVEAAPYGIAIAKDNTQLRD 330 Query: 240 IVSWTHYAMVTAEELG 255 + A++ E Sbjct: 331 AIKAALDAIIENGEYQ 346 >gi|319940985|ref|ZP_08015322.1| amino acid ABC transport system periplasmic binding component [Sutterella wadsworthensis 3_1_45B] gi|319805558|gb|EFW02353.1| amino acid ABC transport system periplasmic binding component [Sutterella wadsworthensis 3_1_45B] Length = 258 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 73/222 (32%), Gaps = 9/222 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 G F N + GFD+D +A++ A D ++++ F AL + Sbjct: 26 TYTVGTGATYRPFEYEAPNKEIVGFDIDLMKAIAKAQGFD---VEFVNTTWSTIFPALNN 82 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 DI+ T R+ + F + Q + I S+ L G I V + Sbjct: 83 GDRDIIMSGITITDKRKE--AVDFSEPYFLAHQLILTSSNLQIKSLKDLEGKLIAVVNAS 140 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 ++ ++ F + F+ DA GD+ L + + + Sbjct: 141 AGDVAASNAFGKA--STNIRRFDNTPLALEELANGGVDAMIGDVGVLQ-WYMKQNPDKKF 197 Query: 215 VILPDIISKSPL-APAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + + +G+T+ N V+ ++ + Sbjct: 198 NQCRDPEFQEQYFGIGVRKGNTQVLNDVNAGLKKVIESGAYN 239 >gi|311278729|ref|YP_003940960.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter cloacae SCF1] gi|308747924|gb|ADO47676.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter cloacae SCF1] Length = 260 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 89/279 (31%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L I +S ++ G + F+ A GD+ GFD Sbjct: 1 MKKTVLALSLLLGISSASSVFAALP--------HNVRIGTDATYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QIKCTWVGSDFDSLIPSLKAKKIDAIISSLSITEKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E + ++ + + ++ Sbjct: 108 KLYAADSRLIATKGSPIVPTIDSLKGKHVGVLQGSTQEAYANENWRTKGVD--VVAYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + A R DA D A L ++ + + + D Sbjct: 166 DLIYSDLAAGRLDAAFQDEVAASEGFLKQPAGKDYAFAGPSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E A A ++++K + +V Sbjct: 226 VELKA-------AFDKALADLRKDGTYDKMAKKYFDFNV 257 >gi|170699413|ref|ZP_02890458.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170135669|gb|EDT03952.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 266 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 74/227 (32%), Gaps = 13/227 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S A +L +K+ G LK + F A G +GFDVD +A+++ + P Q+ Sbjct: 24 SHAADLLDTVKQAGVLKIALEGTYPPFDYRNAEGQLEGFDVDVAKAVAARLGVKP---QF 80 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--IS 138 + LQ+ + D++ T R L F + + + Sbjct: 81 VTTEWSGILAGLQAGKFDVIVNQVAITPSR--QQALDFSMPYVYSSAQLLQRQNDTRAFK 138 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S+ +L G + V G+ + V+ E A R DA D Sbjct: 139 SLDELKGKKVGVTMGSNYVDLVKTVPA-----IDLQVYPGTPENLRDLAAGRIDAAVNDR 193 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + + N + + +G+ ++ + Sbjct: 194 -LMLSYLIKNSHLPLRPGSVLAGGEDRMGIPFRKGNPKFAKAIDDAV 239 >gi|257481840|ref|ZP_05635881.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289624459|ref|ZP_06457413.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651580|ref|ZP_06482923.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298485183|ref|ZP_07003277.1| ABC transporter amino acid-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160295|gb|EFI01322.1| ABC transporter amino acid-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330866609|gb|EGH01318.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330886066|gb|EGH19967.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. mori str. 301020] gi|330986783|gb|EGH84886.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009475|gb|EGH89531.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 261 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 83/244 (34%), Gaps = 10/244 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + +A+ L D+ RG LK + F V + +G D+D + L+ + Sbjct: 17 MLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAQLLADQL---K 73 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++ P+N+ R L + ++D++ + RE + F Sbjct: 74 VKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFSRAYAPFYLAVFGPPDS 131 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + ++ L G +I V G ++ L+ FE AAY A + D Sbjct: 132 PVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDNNSTIAAYLAGQTDLIA 188 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + A ++ P L + SP+ + +G E V A L Sbjct: 189 SGNVVMVA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLGKVDEILNAAKADGALE 246 Query: 256 ITQK 259 + Sbjct: 247 KASQ 250 >gi|241554227|ref|YP_002979440.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863533|gb|ACS61195.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 275 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 77/239 (32%), Gaps = 10/239 (4%) Query: 1 MY-KDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M ++ L + S A L +K G LK G T F + A G+ G Sbjct: 1 MKAHSLLKGLVGAAFLLGAAVSAHAADTLAAVKAAGTLKVGTETAFAPFDYIDA-GEHTG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +VD + + I+++ L F AL++ + D+++ T R F Sbjct: 60 LNVDLFAEIGKELGVK---IEWVALPWDGVFPALEAGKFDVVAGPATITKKR--MERYRF 114 Query: 119 RPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 P + IS ++G +I V T L ++ K + Sbjct: 115 TPPIAEATIAILKKAGDTTISKPEDIAGKTIGVGKATAQLDQLKEFSATLPTKVDVREYP 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E A A R + + + + + V+LP KS ++ Sbjct: 175 AFTESYADLAAGRIAGVANSLPNIA-FVASQRKGTFEVVLPPFGKKSYFGFIGLKDADH 232 >gi|71733916|ref|YP_272590.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554469|gb|AAZ33680.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 320 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 83/244 (34%), Gaps = 10/244 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + +A+ L D+ RG LK + F V + +G D+D + L+ + Sbjct: 76 MLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAQLLADQL---K 132 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++ P+N+ R L + ++D++ + RE + F Sbjct: 133 VKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFSRAYAPFYLAVFGPPDS 190 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + ++ L G +I V G ++ L+ FE AAY A + D Sbjct: 191 PVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDNNSTIAAYLAGQTDLIA 247 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + A ++ P L + SP+ + +G E V A L Sbjct: 248 SGNVVMVA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLGKVDEILNAAKADGALE 305 Query: 256 ITQK 259 + Sbjct: 306 KASQ 309 >gi|24112233|ref|NP_706743.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2a str. 301] gi|30062345|ref|NP_836516.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2a str. 2457T] gi|24051080|gb|AAN42450.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2a str. 301] gi|30040590|gb|AAP16322.1| arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2a str. 2457T] gi|281600186|gb|ADA73170.1| Arginine 3rd transport system periplasmic binding protein [Shigella flexneri 2002017] gi|313650230|gb|EFS14642.1| arginine-binding periplasmic protein 1 [Shigella flexneri 2a str. 2457T] Length = 243 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 86/249 (34%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAE-------------TIRFATEAPYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + F Sbjct: 48 VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D+ GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDSVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTH 245 ++ Sbjct: 216 LQQKLNTAL 224 >gi|290960317|ref|YP_003491499.1| extracellular transport-associated solute-binding protein [Streptomyces scabiei 87.22] gi|260649843|emb|CBG72959.1| putative extracellular transport-associated solute-binding protein [Streptomyces scabiei 87.22] Length = 350 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 76/232 (32%), Gaps = 14/232 (6%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-----WKGFDVDFCRALSSAIFDDPSK 77 + + + IK GF+ G++ + N +GFD+D R ++ I DP K Sbjct: 87 SGTTIQRIKDNGFITVGVDQNSYRWGYRDPNAKDDGAQLEGFDIDIVRRIAKEILGDPDK 146 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + + + R AL+ ++D++ R + R +AF + GQ + K I Sbjct: 147 VHFKAIPTSRRIPALRDGEVDMVVRTMTISCER--MDEVAFSQPYFRTGQQVLAPKSSTI 204 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNM----KYHPIVFERVEEIDAAYRAHRCDA 193 + A T+T LT K + + + + DA Sbjct: 205 KGYGKSLADKKICTAATSTALTALTAGKKSGEVPASTDISLQVPNQLDCLVRLQLGQVDA 264 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D + + + + + + A+ + V+ Sbjct: 265 VVTDGALAASQAAQDP---TVDLKGEPFTTEYYGVAMNLDAKDLVRRVNQVL 313 >gi|294631352|ref|ZP_06709912.1| arginine/ornithine binding protein [Streptomyces sp. e14] gi|292834685|gb|EFF93034.1| arginine/ornithine binding protein [Streptomyces sp. e14] Length = 320 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 80/242 (33%), Gaps = 18/242 (7%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I+ +G ++ G + A+G G D D A+ + + Sbjct: 61 ASIRDKGVIRVGSDISYAPVEFKDASGKVAGIDPDLADAMGKQLGVK---FDFQNGTFDA 117 Query: 88 RFLALQSKQIDILSRNTDWTLLR----------EISLGLAFRPITYFDGQGFIMHKKKG- 136 L+S + DI R ++ G+ F G K Sbjct: 118 LLTGLRSNRYDIAMSAMTDNKNRQDGVDPTTGKKVGEGVDFVD-YLQAGVSIYTRKGDTK 176 Query: 137 -ISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPIVFERVEEIDAAYRAHRCDA 193 I+S S L G I V+ GT +E K K F+ ++ + R+ DA Sbjct: 177 GIASWSDLCGKKIAVERGTVSEDLAKSETKKCPAGKKITIQAFDDNQQAETRLRSGGADA 236 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D T+ + I+ D + +P A+ + +T+ + + A++ + E Sbjct: 237 VSADFPVAAYAVKTSGGGKDFEIVGDQVEAAPYGIAVGKSNTQLRDALQAAMDAVIKSGE 296 Query: 254 LG 255 Sbjct: 297 YQ 298 >gi|51595707|ref|YP_069898.1| ABC transporter, periplasmic arginine binding protein artJ [Yersinia pseudotuberculosis IP 32953] gi|170024949|ref|YP_001721454.1| cationic amino acid ABC transporter periplasmic binding protein [Yersinia pseudotuberculosis YPIII] gi|186894781|ref|YP_001871893.1| cationic amino acid ABC transporter periplasmic binding protein [Yersinia pseudotuberculosis PB1/+] gi|51588989|emb|CAH20607.1| ABC transporter, periplasmic arginine binding protein artJ [Yersinia pseudotuberculosis IP 32953] gi|169751483|gb|ACA69001.1| cationic amino acid ABC transporter, periplasmic binding protein [Yersinia pseudotuberculosis YPIII] gi|186697807|gb|ACC88436.1| cationic amino acid ABC transporter, periplasmic binding protein [Yersinia pseudotuberculosis PB1/+] Length = 243 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 82/250 (32%), Gaps = 25/250 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L + F++ + L+ + F + AN + GFD Sbjct: 1 MKKLLLATL--LSGMVFSATAAE-----------TLRFAASATYPPFESMDANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + AL+ K+ D + D T R + F Sbjct: 48 MDLAKALCKQM---EANCTFTNQAFDSLIPALKFKRYDAVISGMDITPERSKQVA--FTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K S+ + L G I ++ GTT + L D + ++ + Sbjct: 103 PYYANSAIVIAPKG-KFSTFADLKGKKIGMENGTTHQKYLQDKHPE----IQTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + TN + + L A+ + Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPNLASVGEHVTDPQYFGTGLGIAVRPDNIALL 217 Query: 239 NIVSWTHYAM 248 ++ A+ Sbjct: 218 TKLNKAIDAV 227 >gi|153011680|ref|YP_001372894.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151563568|gb|ABS17065.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 264 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 93/280 (33%), Gaps = 34/280 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + I+ ++ + +A ++ G F + +G KGFD Sbjct: 1 MLKQAKMGIIAALVAVCGALPAHAE---------EIRMGAEGAYAPFNYLDPSGQLKGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + D + ALQSK+ DI++ + T R ++F Sbjct: 52 IDVGNAICEKLKAD---CVWSANEWSGIIPALQSKKFDIMASSMAITESR--MQQVSFSD 106 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y++ F+ K+ G+ + G I Q G+ L +F + ++ Sbjct: 107 PYYYNTMRFVALKELGLKDVTPESAKGKVIGTQTGSIAVDALQRFFPDN----EVKLYPT 162 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH----VILPDIISKSPLAPAIIQGD 234 +EE R D AL E +L + A + D Sbjct: 163 LEEAFLDIENGRIDLLLESKFALSDWIKKGADCCEFVGNEFLLDGTLGA---GMAFRKDD 219 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 E V+ ++ + +++S + D++ Sbjct: 220 EELRMRVNKALAEII-------QDGSYDKISAKYFDFDIR 252 >gi|295836545|ref|ZP_06823478.1| arginine/ornithine binding protein [Streptomyces sp. SPB74] gi|197697328|gb|EDY44261.1| arginine/ornithine binding protein [Streptomyces sp. SPB74] Length = 324 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 86/261 (32%), Gaps = 23/261 (8%) Query: 14 ILFFTSFSTNASIL-----GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + + L +I+ +G +K G + +G G D+D AL Sbjct: 46 AASAGTSKSAGDSLNAKLPKEIRDKGVIKVGSDIAYPPVEYKDKSGKVVGIDIDLADALG 105 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR----------EISLGLAF 118 + ++ L+SK+ D+ T R ++ G+ F Sbjct: 106 KELGVK---FEFQNATFDTLLTGLRSKRYDLAMSAMTDTADRQNGVDGDTGKKVGEGVDF 162 Query: 119 RPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFK--AHNMKYHPI 174 + G K +GI + + L G I +Q GT + K A K Sbjct: 163 VD-YFTAGVSIYTPKGKTQGIKTWADLCGKKIVLQRGTVSHDLAKAESKKCAGGKKIAIE 221 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 ++ ++ RA DA + D T+ + ++ + + +P AI + + Sbjct: 222 AYDNDQQAQTRLRAGGGDAGSSDFPVAAWAVKTSGGGKDFELVGEQVEAAPYGIAIAKSN 281 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 T + + A++ E Sbjct: 282 TGLRDAIKSAMEAIIANGEYD 302 >gi|302521885|ref|ZP_07274227.1| secreted protein [Streptomyces sp. SPB78] gi|318060271|ref|ZP_07978994.1| arginine/ornithine binding protein [Streptomyces sp. SA3_actG] gi|318076289|ref|ZP_07983621.1| arginine/ornithine binding protein [Streptomyces sp. SA3_actF] gi|302430780|gb|EFL02596.1| secreted protein [Streptomyces sp. SPB78] Length = 324 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 84/242 (34%), Gaps = 18/242 (7%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +I+ +G +K G + +G G DVD AL + + ++ Sbjct: 65 AEIRDKGVIKVGSDIAYPPVEYKDKSGKVVGIDVDLAEALGKELG---VRFEFQNATFDT 121 Query: 88 RFLALQSKQIDILSRNTDWTLLR----------EISLGLAFRPITYFDGQGFIMH--KKK 135 L+SK+ D+ T R ++ G+ F + G K + Sbjct: 122 LLTGLRSKRYDLAMSAMTDTADRQNGVDGDTGKKVGEGVDFVD-YFTAGVSIYTPKGKTQ 180 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFK--AHNMKYHPIVFERVEEIDAAYRAHRCDA 193 GI + S L G I +Q GT + K A K ++ ++ RA DA Sbjct: 181 GIKTWSDLCGKKIVLQRGTVSHDLAKAESKKCAGGKKIAIEAYDNDQQAQTRLRAGGGDA 240 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D T+ + ++ + + +P AI + +T + + A++ E Sbjct: 241 GSSDFPVAAWAVKTSGGGKDFELVGEQVEAAPYGIAIAKSNTRLRDAIKAAMDAIIANGE 300 Query: 254 LG 255 Sbjct: 301 YD 302 >gi|116333853|ref|YP_795380.1| amino acid ABC transporter periplasmic protein [Lactobacillus brevis ATCC 367] gi|116099200|gb|ABJ64349.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus brevis ATCC 367] Length = 280 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 83/259 (32%), Gaps = 18/259 (6%) Query: 1 MYKDFFVSILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGLVGFAEV 50 M K + L + + + + A +K++ + G++ V Sbjct: 1 MKKGLRIWALLAVCIGLSGLLAGCRTVTQRANTADTWSKVKQQKKVVVGLDDSFVPMGFR 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + +G G+D+D RA+ K+ + ++ L + ID++ T R Sbjct: 61 QKSGKLVGYDIDLARAVFKLYG---IKVDFQTIDWNMNVTELHNGTIDLIWNGFSITPQR 117 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + F ++ Q + KK I S + + G + Q G++ + Y K + Sbjct: 118 QKQAA--FSDTYLYNDQVLVTLKKNKIKSFADMQGKVLGAQTGSSGANDIDTYPKLLKNR 175 Query: 171 Y---HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + ++ R D + P + + + K A Sbjct: 176 IKNHEAVTYDSFTNAFIDLNVGRIQGLLIDSTYANYYIKHQAHPENYRVTTGALPKEKFA 235 Query: 228 PAIIQGDTEWYNIVSWTHY 246 + +GD + ++ Sbjct: 236 VGMRKGDVTMRHKINAGLK 254 >gi|256843605|ref|ZP_05549093.1| glutamine ABC transporter substrate-binding protein [Lactobacillus crispatus 125-2-CHN] gi|312984334|ref|ZP_07791676.1| CjaA protein [Lactobacillus crispatus CTV-05] gi|256615025|gb|EEU20226.1| glutamine ABC transporter substrate-binding protein [Lactobacillus crispatus 125-2-CHN] gi|310894259|gb|EFQ43339.1| CjaA protein [Lactobacillus crispatus CTV-05] Length = 288 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 59/299 (19%), Positives = 108/299 (36%), Gaps = 42/299 (14%) Query: 1 MYKDFF---VSILCLIILFFTS----------FSTNASIL------GDIKKRGFLKCGIN 41 M K F ++IL ++++ + + IK+RG+L+ + Sbjct: 1 MAKKIFNWIMAILFVVVVLVAGYIGISRPGINGTASEDRWNSENNVSSIKRRGYLRIAVF 60 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 L + V + G G+DV R ++ + P +++ +NA R L S + DI+ Sbjct: 61 GDLPPYGWVNSQGKRVGYDVRLARRVAKDLGVKP---KFIQVNANNRIDTLNSNKADIVL 117 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 N T R+ ++ G I K +++ QL G S+ V GTT E Sbjct: 118 ANFTLTPERKSV--ASWTKPYMKVSVGVISPKSAPVTNAKQLKGKSVIVTKGTTAENYFT 175 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 + + F+ + A + R A D S LYA P V + I Sbjct: 176 -----KQKGVNLLKFDSKTQQFNAIKNGRGAALADDNSYLYAWVKR--NPKFTVGIKTIG 228 Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280 ++ A+ +G+ + IT+ N N +++ + G + Sbjct: 229 PNQYISGAVKKGNKSLQKWMDR-----------EITKLNRESFFTYDYNKELKPYFGKE 276 >gi|170683333|ref|YP_001744510.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli SMS-3-5] gi|170521051|gb|ACB19229.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli SMS-3-5] Length = 260 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ ++ +++ + L + ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E D +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANDNWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L + + + + D Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGPSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKALN------ELRQDGT-YDKMAKKYFDFNV 257 >gi|319792874|ref|YP_004154514.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315595337|gb|ADU36403.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 265 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 76/240 (31%), Gaps = 10/240 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + +A + DIKK+G + G+ + A G+D D + L+ Sbjct: 21 TVFAPFASAQSVADIKKKGEITIGMLVDFPPYGTTDAKNQPDGYDADVAKLLAKD---WG 77 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K +P+ R L + ++D+L + T R + F K Sbjct: 78 VKANIVPVTGPNRIPFLLTNKVDLLVASLAVTPERAKQVQ--FSQPYAAATIVLYGATKT 135 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I + + L G + V +T ++ + F+ A + + DA Sbjct: 136 PIKAATDLKGLRVGVARASTQDVAVTKAAPE---GTEIRRFDDDASAMQALISGQVDAI- 191 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 S A ++ P+ + + + A+ G E V+ EL Sbjct: 192 -GCSVTVAAQIAKRVPAGTYENKFTLVQQSMGIAMRPGQEELTKAVNEFVQKNTANGELN 250 >gi|237815293|ref|ZP_04594291.1| extracellular solute-binding protein [Brucella abortus str. 2308 A] gi|237790130|gb|EEP64340.1| extracellular solute-binding protein [Brucella abortus str. 2308 A] Length = 293 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G F + +G GFDVD RAL + ++ ++ ALQ+ Sbjct: 60 KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 116 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152 + D + T R+ + F Y G K I + L+G +I VQ Sbjct: 117 GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 174 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT F + EE R DA D L T D Sbjct: 175 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 230 Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + D I + A +G E + A+ Sbjct: 231 CKMVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 270 >gi|145592208|ref|YP_001154210.1| extracellular solute-binding protein [Pyrobaculum arsenaticum DSM 13514] gi|145283976|gb|ABP51558.1| extracellular solute-binding protein, family 3 [Pyrobaculum arsenaticum DSM 13514] Length = 282 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 55/290 (18%), Positives = 95/290 (32%), Gaps = 31/290 (10%) Query: 1 MYKDFFVSILCLIILFF------------TSFSTNASI---------LGDIKKRGFLKCG 39 M + ++ L T+ +T S + IKKRG L G Sbjct: 1 MKSTILAVVALVVGLIAGYLVGMYSAPKPTAPATQTSTPAAAQCPVSVDIIKKRGKLILG 60 Query: 40 INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 + + V AN + G+D+D R ++ A+ + ++ + A++ +D+ Sbjct: 61 TDATWPPWEWV-ANNTFVGWDIDIAREIAKALGVE---LEIRDMRFAGLLEAVRKGDVDL 116 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTEL 158 WT RE L F Y + + + I+ V L G + VQ GTT + Sbjct: 117 ALSAITWTTEREKV--LEFSMPYYLESIVIVTKTSRNDINKVEDLYGKKVGVQIGTTHDE 174 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 + + + R DA D S AL LP Sbjct: 175 WSTTNLEKPGKASVSRYDKVYPYMVEVLRRGDVDAIILDRSIATALVRKFPDLKIAFELP 234 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKD 267 ++ A+ + + +V ++ +L I QKN K Sbjct: 235 GSAG--YISVAMPKCAQDLKLVVDQVIENLIQTGKLDEIMQKNFELFLKS 282 >gi|116619008|ref|YP_819379.1| amino acid ABC transporter periplasmic protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097855|gb|ABJ63006.1| amino acid ABC transporter substrate-binding protein, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 288 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 91/253 (35%), Gaps = 20/253 (7%) Query: 4 DFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWK 57 ++ + ++ L + + + + L ++K G + G+ + F + G K Sbjct: 14 TIVLAAVIVLGLLWATTAAKKNEEHQDTLQRVEKLGRIIWGVKSDTKLFGLMDTKTGVSK 73 Query: 58 GFDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFDVD +AL+ I P +++P+++ + L++ ID T E Sbjct: 74 GFDVDIAKALTVQISKQTGVPMSAEFVPVSSSSKIQLLKNTNIDGTVSTMTITP--EREK 131 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYH 172 + F + GQ ++ K GI S+ ++ I V GTT + Sbjct: 132 IIDFTNQYFDAGQSILVKKDSGIKSIKDMNDSKYKIIVVVGTTAAEETKKFAPKAK---- 187 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + + A +A + A + D + LY + P ++ I+ + P A Sbjct: 188 LLAVQDYATGMQALKAGQGQAMSTDNAILYGFAT--ENP-DYQIVGGTFTHGPYGIAFDN 244 Query: 233 GDTEWYNIVSWTH 245 + Sbjct: 245 NQGPMVRETNKAL 257 >gi|307703651|ref|ZP_07640593.1| arginine-binding periplasmic protein 1 [Streptococcus oralis ATCC 35037] gi|307623058|gb|EFO02053.1| arginine-binding periplasmic protein 1 [Streptococcus oralis ATCC 35037] Length = 259 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 82/245 (33%), Gaps = 14/245 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDF 63 + +++ + ++ S + IK++G L + F V G D+D Sbjct: 1 MLASVVLVACQSGTDSSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVDGKNQVVGADIDM 60 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 +A++ + ++ ++ +LQ+ + D+ T R+ F Y Sbjct: 61 AQAIADELGVK---LEISSMSFDNVLTSLQTGKADLAIAGISATDERKEV--FDFSIPYY 115 Query: 124 FDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + F++ K +S L+ A+I Q GT E + + I + E Sbjct: 116 ENKMSFLVRKADLDKYKDLSSLASANIAAQKGTVPETMVKEQLP----NAQLISLTNMGE 171 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +A + DA D + N + + A AI + ++ +V Sbjct: 172 AVNELQAGKVDAVHMDEPVALSYAGKNSDLVVASVNLTMKDGEANAVAIKKDQSDLKAVV 231 Query: 242 SWTHY 246 Sbjct: 232 DKVIQ 236 >gi|27379088|ref|NP_770617.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] gi|27352238|dbj|BAC49242.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 265 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 96/247 (38%), Gaps = 14/247 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F + + +A L D+ G L+ GI T + G+ G D D Sbjct: 5 KSLFAIAATALAVLAAPNLAHADKLQDVLGSGKLRVGILTDAAPWGFKDDKGEIAGLDAD 64 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R +++ + ++ +P+ R +L S +ID+L T R + + F Sbjct: 65 LARLIAADMGVK---LELVPVTGAARIPSLLSDKIDMLIAGLGATPER--AQQVMFSQPY 119 Query: 123 YFDGQGFIMHKKKGISS---VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G K ++ L G S+ V G+T ++ L D + FE Sbjct: 120 AVVNLGVYGAKSLPSATSKKPDNLDGRSVAVAKGSTLDVWLTDNAPK----VKLVRFEDT 175 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AA+ A + D + + + ALK+ + P++ V L +I +SP + QG+ N Sbjct: 176 PAALAAFLAGQADTFAENSAI--ALKVQDQNPTKEVELKFLIRQSPAHVGVRQGEQNLLN 233 Query: 240 IVSWTHY 246 ++ + Sbjct: 234 WINTDIF 240 >gi|326790342|ref|YP_004308163.1| ABC transporter periplasmic protein [Clostridium lentocellum DSM 5427] gi|326541106|gb|ADZ82965.1| ABC-type transporter, periplasmic subunit family 3 [Clostridium lentocellum DSM 5427] Length = 280 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 98/278 (35%), Gaps = 30/278 (10%) Query: 1 MYK---DFFVSILCLIILFFT----------SFSTNASILGDIKKRGFLKCGINTGLVGF 47 M K ++L + +L + + + IK G LK G + F Sbjct: 1 MKKGIKKIMATLLAVTMLGVLGSCTKTETSEAGGSATGGIQKIKDAGVLKVGCKIDVPSF 60 Query: 48 AEVK-ANGDWKGFDVDFCRALSSAIF-------DDPSKIQYLPLNAKERFLALQSKQIDI 99 A G+++G ++D ++ IF + + + + AK R L S +ID+ Sbjct: 61 GLQNTATGEYEGVEIDLAYEIAGKIFDCTAAEAKEKKLVAFQGVTAKTRGGLLDSGEIDL 120 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159 + T R+ F Y D G ++ K GI S++ L G I V G+ T+ Sbjct: 121 VIATFTVTEERKE--SWNFSTPYYTDAVGLMVLKDSGIQSINDLDGKIIGVSQGSITKDG 178 Query: 160 LADYFKAHNMKYHPI--VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 Y K + P+ F+ + A D + D + L +IL Sbjct: 179 FEAYIKETGINVTPVFEEFDGYPALSTALSTKNIDVFAVDRAILAGY-----SDDSTMIL 233 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D ++ A + E V +V + ++ Sbjct: 234 EDRFAEQDYGVASALSNKELAETVDGVVKGLVDSGKMA 271 >gi|294852215|ref|ZP_06792888.1| polar amino acid transport system substrate-binding protein [Brucella sp. NVSL 07-0026] gi|294820804|gb|EFG37803.1| polar amino acid transport system substrate-binding protein [Brucella sp. NVSL 07-0026] Length = 285 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G F + +G GFDVD RAL + ++ ++ ALQ+ Sbjct: 52 KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 108 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152 + D + T R+ + F Y G K I + L+G +I VQ Sbjct: 109 GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 166 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT F + EE R DA D L T D Sbjct: 167 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 222 Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + D I + A +G E + A+ Sbjct: 223 CKMVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 262 >gi|163843133|ref|YP_001627537.1| extracellular solute-binding protein [Brucella suis ATCC 23445] gi|163673856|gb|ABY37967.1| extracellular solute-binding protein family 3 [Brucella suis ATCC 23445] Length = 293 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 66/220 (30%), Gaps = 15/220 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G F + +G GFDVD RAL + ++ ++ ALQ+ Sbjct: 60 KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 116 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152 + D + T R+ + F Y G K I + L+G +I VQ Sbjct: 117 GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 174 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT F + EE R DA D L T D Sbjct: 175 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 230 Query: 213 EH----VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 D I + A +G E + A+ Sbjct: 231 CKTVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 270 >gi|323525063|ref|YP_004227216.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323382065|gb|ADX54156.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 267 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 82/229 (35%), Gaps = 11/229 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 TS + +A L +I K G LK + F V + +G+D+D L+ ++ Sbjct: 25 MTSPAVHADTLDNIAKAGVLKVAVPEDYPPFGSVGPDMKPQGYDIDTAALLAKSM---NV 81 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K++ +P+N+ R LQ+ ++D++ + T RE + F QG Sbjct: 82 KLELVPVNSANRIPYLQTGKVDLVISSLGKTPDREKV--IDFSTAYAPYYQGVFGPADIK 139 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 +S + L+G ++ G EL L FE AA+ + + Sbjct: 140 VSGPADLTGKTVGATRGALEELGLTQMAP----NATIKRFEDNNATIAAFLSGQVQLIAA 195 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A+ P +I SP + + + V+ Sbjct: 196 GNIVAAAILA--KNPPRRPEPKFVIKNSPCFVGMNKNEPRLQQKVNAAI 242 >gi|261365992|ref|ZP_05978875.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria mucosa ATCC 25996] gi|288565423|gb|EFC86983.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria mucosa ATCC 25996] Length = 276 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 81/227 (35%), Gaps = 10/227 (4%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K + N F + + G+ +GFDVD A++ A K+++ F Sbjct: 34 KADKVYRVAANAEFAPFESLDSAGNVEGFDVDLMNAMAKAGG---FKVEFKHQPWDSLFP 90 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SIC 149 AL++ DI+ T R+ + F + Q ++ K K ++S L + Sbjct: 91 ALKNGDTDIVISGVTITDERK--QSMDFTDPYFEITQVVLVPKGKKVASSDDLKNMAKVG 148 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V G T + +++ N FE V + DA D + + N Sbjct: 149 VVTGQTGDFSVSKLLG--NDNPKIARFESVPLVIKELENGGVDAVVSDSAVIANYVKNNP 206 Query: 210 -RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + + LPD + A +GD +++ + + E Sbjct: 207 TKSMDFITLPD-FTIENYGIAARKGDEATIKMLNEALKKVRDSGEYD 252 >gi|251797220|ref|YP_003011951.1| extracellular solute-binding protein family 3 [Paenibacillus sp. JDR-2] gi|247544846|gb|ACT01865.1| extracellular solute-binding protein family 3 [Paenibacillus sp. JDR-2] Length = 313 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 70/232 (30%), Gaps = 13/232 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + + + + L IK G + G F +G GFDV+ ++ I Sbjct: 74 SGNAASDNSLKAIKSSGEITIGTEGTYAPFTFHDKSGKLTGFDVEIAEEIAKRIGVKA-- 131 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKG 136 +++ L +K+ D+++ + F I+ Sbjct: 132 -KFVETKWDGMLAGLDAKRFDMVANEVTI--RDDRKAKYDFSDPYILSKAVLIVKESNTN 188 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I S+S L G + L D KA+ + + + + R DA Sbjct: 189 IKSLSDLKGKKSG----QSLTSDLGDIAKANG--AQLVAVDGFNQAIDLLTSGRIDATIN 242 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 D + LK ++ + S +G E + VS M Sbjct: 243 DKLSYLDLKKARPD-VPIKVVAETDQVSQSGMLFRKGSKELVDAVSNAIKDM 293 >gi|153011031|ref|YP_001372245.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151562919|gb|ABS16416.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 253 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 81/248 (32%), Gaps = 18/248 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + +I + + K+ ++ F V A+G +G D Sbjct: 1 MLKAILFAGVASVIAALPAQA---------KEWKEIRIATEGAYPPFNFVAADGSLQGLD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ AL A+ +K + + L+S + D + + T R+ + F Sbjct: 52 VEIANALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSITEERKKEVA--FTD 106 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + K I+S G S+ Q TT D + ++ Sbjct: 107 KYYSTPLSVAVSKDSPITSLDAEAFKGKSVGAQGSTTQGNYAEDVYGKAGAD--VKLYPT 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E +A + R DA D + + +I +++ A+ QGD + Sbjct: 165 ADEANADLKNGRLDAVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTGIALRQGDDDLR 224 Query: 239 NIVSWTHY 246 + Sbjct: 225 EQFNAAIK 232 >gi|330718494|ref|ZP_08313094.1| amino acid ABC transporter periplasmic protein [Leuconostoc fallax KCTC 3537] Length = 265 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 89/235 (37%), Gaps = 15/235 (6%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDP 75 S + + IK++ + G+ F + G+++GFDVD RA++ I D Sbjct: 10 GASEAKHVDTFDRIKEQHRIVWGVKADTRLFGLMNTKTGEYEGFDVDIARAVTKQIAKDQ 69 Query: 76 S---KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 + K + + +++ + L++ ID + T RE + F + GQ ++ Sbjct: 70 NIKLKAELVQVSSSSKIQLLKNANIDATASVMTITKERE--NQVDFTQPYFPAGQSLLVK 127 Query: 133 KKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + I SV L G ++ GTT T+ ++ + + A +A + Sbjct: 128 ENSDIRSVKDLNQPGRTVIGAVGTTAIPTMKEFAPK----VRVLSLADYAQSMTALKAGQ 183 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 DA T D + LY L N + I+ + P A ++ Sbjct: 184 GDALTTDNAILYGLAQQNPG---YKIVGGNFTNQPYGLATDNDQPRMIAAMNKAL 235 >gi|322411346|gb|EFY02254.1| glutamine-binding protein precursor [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 266 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 47/222 (21%), Positives = 97/222 (43%), Gaps = 11/222 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 ++L I K+G L+ G+ + F ++G ++D + ++ A+ P Q+ + Sbjct: 30 NVLKQITKKGQLRIGVKQDVPNFGYYHPKHRQFEGMEIDIAKKIAKALDVKP---QFTAV 86 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 A+ R L ++Q+D++ T E AF Y D GF++ K I+S+ +L Sbjct: 87 TAQTREALLDNQQLDMIIATYTITP--ERQKQYAFSNPYYLDEIGFLVKKSDAITSIKEL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 + +I V G+TT+ + +Y KAH++ + + E+ + A+R +++ D S L Sbjct: 145 NQKTIGVAQGSTTKNAIEEYGKAHDLSFSFVQLGSYPELAISLYANRIASFSVDKSILSG 204 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 IL + ++ A + + ++ Sbjct: 205 YTNQKT-----TILTEGFNQQAYGVATTKSNKALITHINKLL 241 >gi|303256727|ref|ZP_07342741.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderiales bacterium 1_1_47] gi|330999369|ref|ZP_08323086.1| ABC transporter, substrate-binding protein, family 3 [Parasutterella excrementihominis YIT 11859] gi|302860218|gb|EFL83295.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderiales bacterium 1_1_47] gi|329575227|gb|EGG56778.1| ABC transporter, substrate-binding protein, family 3 [Parasutterella excrementihominis YIT 11859] Length = 255 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 80/255 (31%), Gaps = 18/255 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + + + G F + GFD Sbjct: 3 MKKLLWTACAAIALTASAGINAE-----------EYVVGTGATYRPFEYETPQKELVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RA++ A D ++++ + F + DI+ T R+ + F Sbjct: 52 VDLMRAIAKAEGFD---VKFINTPWEGIFATVDKGDRDIIMSGITITDKRK--QVVDFSK 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q + K I+ +S LS S+ V +G+ ++ + F F+ Sbjct: 107 PYFLAHQLILTDKSVKINKLSDLSKGSVAVVSGSAGDVAASKAFGKA--STRIRRFDNTP 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A GDI L N ++ + A+ +G+ + + Sbjct: 165 LALEELNQGGVVAAIGDIGVLAFYARNNPDKHFNMTRDPAFEEQYFGIAVKKGNQKLIDK 224 Query: 241 VSWTHYAMVTAEELG 255 ++ ++ + E Sbjct: 225 INAGLEKVIASGEYN 239 >gi|224825589|ref|ZP_03698694.1| cationic amino acid ABC transporter, periplasmic binding protein [Lutiella nitroferrum 2002] gi|224602510|gb|EEG08688.1| cationic amino acid ABC transporter, periplasmic binding protein [Lutiella nitroferrum 2002] Length = 256 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 85/255 (33%), Gaps = 26/255 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L S A K ++ G++ F A+G GFD Sbjct: 1 MKK-----LAACLMLSLASVGAFA------KDWKVIRFGVDASYAPFESKAADGKLVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + +K ++ + AL++K+ D + + T R + F Sbjct: 50 VDLGNAICEKL---KAKCVWVENDFDGMIPALKAKKFDGILSSLSVTEKRAEQIA--FSD 104 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K + + L I V+ GTT E Y++ + + ++ Sbjct: 105 KLFNAPVRMVAKKGSNLLPTAESLKSKRIGVEQGTTQETYAKAYWEPKG--VNVVPYQNQ 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL------APAIIQG 233 + A + R DA D L + + K P A + + Sbjct: 163 SLVLADLGSGRLDAALQDAVQADIGFLKTPQGRDFAFAG-PELKDPKTLGTGTAIGLRKD 221 Query: 234 DTEWYNIVSWTHYAM 248 D + V+ A+ Sbjct: 222 DADLRQQVNQALAAI 236 >gi|77461680|ref|YP_351187.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77385683|gb|ABA77196.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 261 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 81/241 (33%), Gaps = 10/241 (4%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 +A L D+ KRG LK + F V + +G D+D + L+ + K++ Sbjct: 21 APAHADGLDDVVKRGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAKLLAEQL---KVKLE 77 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 P+N+ R L + ++D++ + RE + F +S+ Sbjct: 78 LTPVNSTNRIPFLTTGKVDLVISSLGKNPEREKV--IDFSRAYAPFYLAVFGPPDAAVST 135 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G +I V G ++ L FE AAY A + D Sbjct: 136 LDDLKGKTISVTRGAIEDIELTKVAPE---GVTIKRFEDNNSTIAAYLAGQVDLIASGNV 192 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 + A ++ P L + SP+ + + + V+ L + Sbjct: 193 VMVA--ISEKNPKRVPALKVKLKDSPVYVGVNKNEPALLGKVNEILTTAKADGALEKNAQ 250 Query: 260 N 260 Sbjct: 251 T 251 >gi|307709177|ref|ZP_07645636.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus mitis SK564] gi|307620123|gb|EFN99240.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus mitis SK564] Length = 279 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 80/229 (34%), Gaps = 8/229 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + +++G + G + V + NG + GFD+D +A+S + K+ Sbjct: 25 ASDPKQDNWNKYQEQGSITIGFDNTFVPMGFEEKNGQYTGFDIDLAQAVSEKLG---FKV 81 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Q+ P++ + LQ+ ID + T R +AF + Q + K + I Sbjct: 82 QFQPIDWDMKETELQNGTIDAIWNGYSATNER--REKVAFSIPYMENQQVLVAKKSQQIH 139 Query: 139 SVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 SV ++ ++ QAG++ L D K ++ E + R DA Sbjct: 140 SVEEMKDKALGAQAGSSGYLDFEAQPDLLKNRVKDQKANQYQSFNEALIDLKNDRIDALL 199 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 D + +++ + A + D ++ Sbjct: 200 IDRVYANYYLQSEGILNDYNVFSAGFESESFAVGVRPADKRLLQALNQA 248 >gi|317053673|ref|YP_004118807.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] gi|316952778|gb|ADU72251.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 270 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 81/246 (32%), Gaps = 11/246 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F + + L L FT+ + + + G L+ + A+G + GFDV+F Sbjct: 10 LFGAAIALCSLSFTTLAASQDNPWGLLSPGHLRVASVGDSKPYTFTDASGQFTGFDVEFF 69 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + D ++ ++ + A+ + Q D T RE + + F Sbjct: 70 KNVAHRMGID--QVDFVGQDFSAILPAVANGQFDAGVAAIGITPAREKT--VDFSTGYLA 125 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + G+++V L+ + V GT E +F + + F + Sbjct: 126 GYLTVLTRSDSGVTNVETLAKHRLGVIQGTLQESYAVQHF----TQTDIVRFPDNNTAVS 181 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A DA D A K R +P AI + + + Sbjct: 182 ALNNSTLDAVFLD---YEAAKSYAGRFKLVSAADIPSFNAPAGVAIAKDKPAFKAALDKA 238 Query: 245 HYAMVT 250 A + Sbjct: 239 IKAAMQ 244 >gi|325265329|ref|ZP_08132054.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Clostridium sp. D5] gi|324029508|gb|EGB90798.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Clostridium sp. D5] Length = 282 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 38/267 (14%), Positives = 79/267 (29%), Gaps = 27/267 (10%) Query: 1 MYKDFFVSIL-----CLIILFFTSFSTNASILGDIKKRGF-------------LKCGINT 42 M + +++ + S + + K G + Sbjct: 1 MKRKIALAMAAALVLTTALAGCGSKAEDTKSDDSAKDNKKTEAVSEEKSEGDSFTVGFDA 60 Query: 43 GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 + G++ GFD+D + + + K P++ + + L S ID + Sbjct: 61 SFPPYGYKDEEGEYVGFDLDLAQEVCDRNGWELKK---QPIDWDAKDMELSSGTIDCIWN 117 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 + + + Q ++ + GI S+ L+G + VQA ++ L + Sbjct: 118 GFTMNGRED---DYTWSDPYVDNSQVVVVAEDSGIKSLEDLAGKLVEVQADSSALTALQE 174 Query: 163 YFKA-HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 K + A +A D A R ++ L + I Sbjct: 175 DQKELADTFGQLTQVPDYNTAFMDLEAGAAEAVAMD--VGVAKYQIESRGGGYITLDETI 232 Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAM 248 S +G+ + + V T M Sbjct: 233 SSEQYGIGFKKGNEKLRDQVQKTLDEM 259 >gi|302336896|ref|YP_003802102.1| extracellular solute-binding protein family 3 [Spirochaeta smaragdinae DSM 11293] gi|301634081|gb|ADK79508.1| extracellular solute-binding protein family 3 [Spirochaeta smaragdinae DSM 11293] Length = 249 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 89/253 (35%), Gaps = 28/253 (11%) Query: 1 MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD-WK 57 M + ++ + L+ L S+L +++ L G N F + A+G+ Sbjct: 1 MKRIATLLTAIALVALL--------SVLSGCQEKNELVMGTNAAFPPFEYIGGADGNAVV 52 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDV+ +A++ ++ + AL + +ID T RE + Sbjct: 53 GFDVEIAKAIAEKAGK---TLRIEDMEFDSLLTALNADKIDFAIAGMTITDEREK--SVD 107 Query: 118 FRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y Q I+ K IS+ L+G I VQ GTT + K + + F Sbjct: 108 FSDPYYEATQAVIVRKADNPISTKDDLNGKKISVQLGTTG----NEIAKEFTDDSNIVAF 163 Query: 177 ERVEEIDAAYRAHRCDAY-TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII--QG 233 E + + DA + A ++ S+ I+ A+ + Sbjct: 164 NTGFEAIMELKNGKVDAMIIDEQPAQNFIRQN----SDLEIVSLDFDPEYYGIAVKEGKS 219 Query: 234 DTEWYNIVSWTHY 246 E I++ T Sbjct: 220 SEELLPIINETLK 232 >gi|256059176|ref|ZP_05449385.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella neotomae 5K33] gi|261323128|ref|ZP_05962325.1| extracellular solute-binding protein [Brucella neotomae 5K33] gi|261299108|gb|EEY02605.1| extracellular solute-binding protein [Brucella neotomae 5K33] Length = 253 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 83/248 (33%), Gaps = 18/248 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + +I + + ++ ++ F V ++G +G D Sbjct: 1 MLKAIVFAGIASVIAVLPAQA---------REWKEIRIATEGAYPPFNFVASDGSLQGLD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL A+ +K + + L+S + D + + T R+ + F Sbjct: 52 VDIAKALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 106 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + K I+S G ++ Q TT D + ++ Sbjct: 107 KYYSTPLSVAVPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E +A ++ R DA D + + +I +++ A A+ GD + Sbjct: 165 ADEANADLKSGRLDAVVSDKFPISDWIKGDGADRCKLIGDIPGTQTDTAVALRLGDDDLR 224 Query: 239 NIVSWTHY 246 + Sbjct: 225 EQFNAAIK 232 >gi|260889730|ref|ZP_05900993.1| amino acid ABC transporter, amino acid-binding protein [Leptotrichia hofstadii F0254] gi|260860336|gb|EEX74836.1| amino acid ABC transporter, amino acid-binding protein [Leptotrichia hofstadii F0254] Length = 215 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 79/216 (36%), Gaps = 15/216 (6%) Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 G+ GFD+D +A++ + S++++ P+N + L L ID++ Sbjct: 1 MGFKDEKGEIVGFDIDLAKAVAQKLG---SEVEFKPINWDSKILDLNGGNIDLIWNGLTI 57 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T R+ + + Q ++ I++ + L+G ++ Q ++ E + Sbjct: 58 TEERKKETEM--TKPYFTSHQLIVVKAGSSINTKADLAGKNVGSQTESSGEEAVKKSGDD 115 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND---RPSEHVILPDIISK 223 K + + ++ A R DA D K T + + + IL D + Sbjct: 116 KKFK-EFKTYAQYDQAFMDLDAGRVDAIIADEVLAKYTKKTKETQAKKELYQILNDNYGE 174 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 A +G+T+ ++ EEL Sbjct: 175 EEYGIAAKKGNTKLIEAINKAI------EELKADGT 204 >gi|262394743|ref|YP_003286597.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. Ex25] gi|6691543|dbj|BAA89348.1| unnamed protein product [Vibrio alginolyticus] gi|262338337|gb|ACY52132.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. Ex25] Length = 256 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 44/226 (19%), Positives = 76/226 (33%), Gaps = 14/226 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + K+ ++ GI F+ + +G KGFDVD AL + K + + + Sbjct: 16 SGVAQAKEWKTVRFGIEGAYPPFSWTETDGSLKGFDVDMANALCEEM---QVKCKIVAQD 72 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +L +++ D + T R+ + F FI K + L Sbjct: 73 WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGANL-DFDNLD 129 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G I VQ TT + L D + K + + +E R A GD SAL Sbjct: 130 GKKIAVQRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEG 186 Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 L + + ++ A+ + D + + Sbjct: 187 VLNKAGGDAYEFVGPSLTDPKWFGEGFGIAVRKQDKDLTKKLDAAI 232 >gi|302671821|ref|YP_003831781.1| amino acid ABC transporter substrate-binding protein [Butyrivibrio proteoclasticus B316] gi|302396294|gb|ADL35199.1| amino acid ABC transporter substrate-binding protein [Butyrivibrio proteoclasticus B316] Length = 303 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 58/313 (18%), Positives = 107/313 (34%), Gaps = 45/313 (14%) Query: 1 MYKDFF------VSILCLIILFFTSFSTNASI------------------------LGDI 30 M K+ F ++ L+ T ++ S L +I Sbjct: 1 MKKNLFTKSAGVITAATLVGASITGCGSSVSTASASDAQAQAETAEAPASSEVYRTLDEI 60 Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ G + G+ + F V NG++ G+DV F + + I Y+ A R Sbjct: 61 KESGTINIGVFSDKSPFGYVDENGEYAGYDVYFAERIGQDLGVK---INYVSTEAANRIE 117 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASIC 149 LQ+ ++DI+ N T R + + F G + I S+ + + I Sbjct: 118 YLQTGKVDIILANFTVTEER--AQEVDFALPYMNVALGVVSPSDAVIDSLDNVGADDEII 175 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V +GTT E L + ++ E A + D + + A + + Sbjct: 176 VISGTTAETYLE----KNYPDIKLQKYDAYAEAKTAIENGNAAGWANDNTEVIAFAI--E 229 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 V +P + +APA+ +G+ N ++ A+ E + DT Sbjct: 230 NEGFTVGVPSLGDSDTIAPAVTKGNETLLNWLNDEIKAI---GEENFFHADYEATLLDTY 286 Query: 270 NPDVQRFLGIDKS 282 D + L ++ Sbjct: 287 GADYEDTLVVEGG 299 >gi|104781755|ref|YP_608253.1| amino acid ABC transporter periplasmic binding protein [Pseudomonas entomophila L48] gi|95110742|emb|CAK15455.1| putative amino acid ABC transporter, periplasmic binding protein [Pseudomonas entomophila L48] Length = 250 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 84/251 (33%), Gaps = 20/251 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + V C + L + + L+ F V AN GFD Sbjct: 1 MKRTMAVVGACALWLAGNASAE------------TLRFATEGAYPPFNYVDANNQLHGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + + + AL +++ D + + T R +AF Sbjct: 49 IDITHALCEQMKVE---CTLVAQDWEGIIPALMARKYDAVVASMIDTQERRK--KIAFTD 103 Query: 121 ITYFDGQGFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K IS G ++ Q+ +T + D + ++ + Sbjct: 104 HYYRTPLTVAVAKDSKISDAQTDFKGYTVGAQSSSTQAIYAEDVYGKAG--AEVKLYPTM 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E +A A R D D L+ N + ++ +K+ A A+ + D Sbjct: 162 DEANADLAAGRLDGVIADKFPLHEWLSKNGQDCCKILGDVANTKADAAIAVRKEDEALRA 221 Query: 240 IVSWTHYAMVT 250 ++ A+V Sbjct: 222 RLNEALAAIVA 232 >gi|299820599|ref|ZP_07052489.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Listeria grayi DSM 20601] gi|299818094|gb|EFI85328.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Listeria grayi DSM 20601] Length = 273 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 75/226 (33%), Gaps = 8/226 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + IKK + G++ V GFDVD +A+ K+++ Sbjct: 24 AGSDRWTAIKKEKEIVVGLDDTFVPMGFRDKKDKIIGFDVDLAKAVFKEYG---IKVKFQ 80 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P++ + L+++ ID++ R +AF + Q + KK I S + Sbjct: 81 PIDWTLKETELKNESIDLIWNGYTVNKERAE--KVAFSQPYMKNEQVLVTLKKNNIRSFA 138 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNM---KYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + G + Q G + +A + P +++ + +R D D Sbjct: 139 GMKGKLLGAQNGASALDDMAKQPEVLTNIIKNKQPELYDSFNDAFIDLNNNRIDGLIIDN 198 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + +++ I + A + + D V+ Sbjct: 199 VYARYIIAKQKNRADYRITTGGFKPADFAVGMRKTDKTLKKKVNQA 244 >gi|225627351|ref|ZP_03785388.1| extracellular solute-binding protein [Brucella ceti str. Cudo] gi|254693596|ref|ZP_05155424.1| extracellular solute-binding protein [Brucella abortus bv. 3 str. Tulya] gi|254701627|ref|ZP_05163455.1| extracellular solute-binding protein [Brucella suis bv. 5 str. 513] gi|254706927|ref|ZP_05168755.1| extracellular solute-binding protein [Brucella pinnipedialis M163/99/10] gi|254709965|ref|ZP_05171776.1| extracellular solute-binding protein [Brucella pinnipedialis B2/94] gi|254730145|ref|ZP_05188723.1| extracellular solute-binding protein [Brucella abortus bv. 4 str. 292] gi|256044536|ref|ZP_05447440.1| extracellular solute-binding protein [Brucella melitensis bv. 1 str. Rev.1] gi|256060967|ref|ZP_05451125.1| extracellular solute-binding protein [Brucella neotomae 5K33] gi|256113396|ref|ZP_05454250.1| extracellular solute-binding protein [Brucella melitensis bv. 3 str. Ether] gi|256159584|ref|ZP_05457346.1| extracellular solute-binding protein [Brucella ceti M490/95/1] gi|256369290|ref|YP_003106798.1| Bacterial extracellular solute-binding protein, family 3 [Brucella microti CCM 4915] gi|260168592|ref|ZP_05755403.1| Bacterial extracellular solute-binding protein, family 3 [Brucella sp. F5/99] gi|297248211|ref|ZP_06931929.1| polar amino acid transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] gi|225617356|gb|EEH14401.1| extracellular solute-binding protein [Brucella ceti str. Cudo] gi|255999450|gb|ACU47849.1| Bacterial extracellular solute-binding protein, family 3 [Brucella microti CCM 4915] gi|297175380|gb|EFH34727.1| polar amino acid transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] gi|326408881|gb|ADZ65946.1| extracellular solute-binding protein [Brucella melitensis M28] gi|326538598|gb|ADZ86813.1| extracellular solute-binding protein family 3 [Brucella melitensis M5-90] Length = 293 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 15/220 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G F + +G GFDVD RAL + ++ ++ ALQ+ Sbjct: 60 KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 116 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152 + D + T R+ + F Y G K I + L+G +I VQ Sbjct: 117 GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 174 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT F + EE R DA D L T D Sbjct: 175 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAVNDDSVTLSEWLKTPDGAC 230 Query: 213 EHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + D I + A +G E + A+ Sbjct: 231 CKMVGTYPPDDAIHGVGVGVAFKKGRPELVEKFNAAIKAI 270 >gi|118592146|ref|ZP_01549539.1| ABC amino acid transporter, periplasmic ligand binding protein [Stappia aggregata IAM 12614] gi|118435118|gb|EAV41766.1| ABC amino acid transporter, periplasmic ligand binding protein [Stappia aggregata IAM 12614] Length = 277 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 35/249 (14%), Positives = 86/249 (34%), Gaps = 13/249 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M ++L + ++ A + IK++G ++ G+ F +G Sbjct: 1 MTLRSVGALLIAATIAGSAVPAMAQEFPPLPEMIKEQGKIRIGVKCDSPPFGATGVDGKP 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G +V+ + + F + + ++ R +L S ++D++ RE + Sbjct: 61 MGIEVEMAKKIGEFAFGSEDGAELSCVTSEARISSLNSGKLDLILATLGRFPAREEV--I 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F I ++ ++ K + +S L G ++ + G + L + + Sbjct: 119 DFSNIYFWGTSNVLVQKDSPVQKLSDLEGKTLLIVKGGSQIKWLEENIP----DIEMMQL 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + A R + + GD +Y L + ++ + + + +G+ E Sbjct: 175 NTTADGVQALIQGRAEGFVGDGGLIYTL---GGNYEDLRVVEEGLDLGVNGIGLRKGEPE 231 Query: 237 WYNIVSWTH 245 V+ Sbjct: 232 LKAFVNAAL 240 >gi|254471566|ref|ZP_05084968.1| cystine ABC transporter, periplasmic cystine-binding protein [Pseudovibrio sp. JE062] gi|211959712|gb|EEA94910.1| cystine ABC transporter, periplasmic cystine-binding protein [Pseudovibrio sp. JE062] Length = 278 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 86/260 (33%), Gaps = 20/260 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + L + + L I K L G N+ A + + +GFD+D Sbjct: 7 KAIIGAALFVSASVVGLSAQAGEALDAIMKNKTLVVGSNSDYRPNAFMGDDNQLQGFDID 66 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + ++ + D +Q++ + + ++ + T R + L F + Sbjct: 67 VSKEIAKRLGVD---VQFVTPGWEVMTAGRWHGRWHMVVGSMTPTKAR--AQVLDFPAVY 121 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK---------AHNMKYHP 173 Y+ F +HK +S++ L+G I V +T L + + + Sbjct: 122 YYTPAAFAVHKNSKATSLADLNGKVIGVVGSSTYHKYLEHRLEIDAVGAPSFEYAVTPGE 181 Query: 174 IVFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 I R DA + + + + L D I PLA AI Sbjct: 182 IKLYSDINEFDELSLGDGVRLDALAQSVPVI---QQAMKKGLPIKQLGDPIFYEPLAIAI 238 Query: 231 IQGDTEWYNIVSWTHYAMVT 250 +GD E + ++ M Sbjct: 239 DKGDKELNDKLAAIVDEMKN 258 >gi|194428243|ref|ZP_03060786.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli B171] gi|194413803|gb|EDX30082.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Escherichia coli B171] Length = 243 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 84/250 (33%), Gaps = 31/250 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + F Sbjct: 48 VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + R D GD + + + + D ++ A+ QG+T Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEW---LKDSPKLAAVGDKVTDKDYFGTGLGIAVRQGNT 214 Query: 236 EWYNIVSWTH 245 E ++ Sbjct: 215 ELQQKLNTAL 224 >gi|269124459|ref|YP_003297829.1| extracellular solute-binding protein family 3 protein [Thermomonospora curvata DSM 43183] gi|268309417|gb|ACY95791.1| extracellular solute-binding protein family 3 [Thermomonospora curvata DSM 43183] Length = 279 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 74/218 (33%), Gaps = 8/218 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 I + L+ G+ G + +G ++GFDVD R ++ + I ++ + R Sbjct: 35 ILDKSTLRIGVKADQPGLGLKRPDGTFEGFDVDVARYVAGRLGFAEEDITFVETPSSVRE 94 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFR-PITYFDGQGFIMHKKKGISSVSQLSGASI 148 ALQ +++D++ T R+ + F P + + +V LSG + Sbjct: 95 QALQERRVDMIVATYSITAGRKT--KVTFAGPYYVAHQDTLVRAGDGAVRNVRDLSGRRL 152 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 C G+ + + + + + + + DA + D L Sbjct: 153 CKVTGSNSWRRVTE---ERKVPARLVETSSYSDCVNRLLSGELDAVSTDDLILAGFAARY 209 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 I+ IS + + D + ++ Sbjct: 210 GD--RVKIINAPISDEKYGIGLHKSDIDGCEAINTALT 245 >gi|150396797|ref|YP_001327264.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150028312|gb|ABR60429.1| extracellular solute-binding protein family 3 [Sinorhizobium medicae WSM419] Length = 260 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 82/252 (32%), Gaps = 23/252 (9%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + + + T + + G F ++++G GFD+D Sbjct: 5 KRLAATASAAVFVLMTGIAMADGE--------KVVIGSEGAYPPFNNLESDGTLTGFDID 56 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +AL + D ++ AL +K+ D + + T R+ + F Sbjct: 57 IAKALCEEMKAD---CTFVTQEWDGMIPALIAKKFDAIVASMSITEERK--QQVDFTNKY 111 Query: 123 YFDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ K I+ + LSG + Q+ TT + K ++ + Sbjct: 112 YNTPPAIVVPKDSPITEATAAGLSGKVLGAQSSTTHSNYAEAHMKE----SELKLYPTAD 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH----VILPDIISKSPLAPAIIQGDTE 236 E R DA D+ L T D + + +I+ A+ +GD Sbjct: 168 EYKLDLANGRIDAAIDDVVVLSEWLKTEDGACCKLLGTLPIDPVINGEGAGIAVRKGDDA 227 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 228 LREKLNKAIEAI 239 >gi|293380805|ref|ZP_06626846.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus crispatus 214-1] gi|290922629|gb|EFD99590.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus crispatus 214-1] Length = 283 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 59/299 (19%), Positives = 108/299 (36%), Gaps = 42/299 (14%) Query: 1 MYKDFF---VSILCLIILFFTS----------FSTNASIL------GDIKKRGFLKCGIN 41 M K F ++IL ++++ + + IK+RG+L+ + Sbjct: 1 MAKKIFNWIMAILFVVVVLVAGYIGISRPGINGTASEDRWNSENNVSSIKRRGYLRIAVF 60 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 L + V + G G+DV R ++ + P +++ +NA R L S + DI+ Sbjct: 61 GDLPPYGWVNSQGKRVGYDVRLARRVAKDLGVKP---KFIQVNANNRIDTLNSNKADIVL 117 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 N T R+ ++ G I K +++ QL G S+ V GTT E Sbjct: 118 ANFTLTPERKSV--ASWTKPYMKVSVGVISPKSAPVTNAKQLKGKSVIVTKGTTAENYFT 175 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 + + F+ + A + R A D S LYA P V + I Sbjct: 176 -----KQKGVNLLKFDSKTQQFNAIKNGRGAALADDNSYLYAWVKR--NPKFTVGIKTIG 228 Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280 ++ A+ +G+ + IT+ N N +++ + G + Sbjct: 229 PNQYISGAVKKGNKSLQKWMDR-----------EITKLNRESFFTYDYNKELKPYFGKE 276 >gi|224367658|ref|YP_002601821.1| AapJ1 [Desulfobacterium autotrophicum HRM2] gi|223690374|gb|ACN13657.1| AapJ1 [Desulfobacterium autotrophicum HRM2] Length = 119 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 52/119 (43%), Positives = 74/119 (62%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M FV +L + LF T+ A L D+K +GF++ G+N L GF + G W+G D Sbjct: 1 MKSVKFVGVLLMAALFLTAGMATADTLEDVKAKGFIQAGVNGDLFGFGKPDEKGVWRGLD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 VD RA+++A+F D +K+++ PL AK RF ALQS +ID+L+RN TL R+ LGL F Sbjct: 61 VDTARAVAAAVFGDANKVKFTPLTAKTRFTALQSGEIDVLTRNCTQTLTRDTDLGLDFA 119 >gi|330970137|gb|EGH70203.1| glutamine ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 277 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 88/235 (37%), Gaps = 13/235 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +A L D+ + L CG+ + F+ + G DVD C+AL+ + + ++ Sbjct: 21 HADQLSDVMSKKSLSCGVYADVPPFSAPDPETRELVGMDVDLCKALAKHMGVE---LELK 77 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 PL+ + R ++ ++D++ N +T R + F Y + ++ S Sbjct: 78 PLSVEARIPEVKMGRVDVIFANLAYTKSRAEQIQ--FSDPYYIAKETLVVRAANADQPKS 135 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 G I G+T+E ++ P+ F+ A + ++ + Sbjct: 136 FFKGKRISSTKGSTSEQSIR------LADATPVTFQDTGSAYMALQQNKVVGLVTNTMTA 189 Query: 202 YALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L E I + ++ P+ + QG+ + V+ + M A E+ Sbjct: 190 IKLVGQAKAGGVELAIAKEPMALEPIGAGMRQGEPAFLAKVNESLREMEAAGEID 244 >gi|260566580|ref|ZP_05837050.1| bacterial extracellular solute-binding protein, family 3 [Brucella suis bv. 4 str. 40] gi|261754839|ref|ZP_05998548.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3 str. 686] gi|260156098|gb|EEW91178.1| bacterial extracellular solute-binding protein, family 3 [Brucella suis bv. 4 str. 40] gi|261744592|gb|EEY32518.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3 str. 686] Length = 268 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 52/162 (32%), Gaps = 11/162 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G F + +G GFDVD RAL + ++ ++ ALQ+ Sbjct: 52 KLVIGTEGAYPPFNFINPDGSLSGFDVDIARALCDEM---KAECTFITQEWDGTIPALQA 108 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152 + D + T R+ + F Y G K I + L+G +I VQ Sbjct: 109 GKFDAYVSSMSITEERKK--QVDFSDKYYNTPPGVAAPKDTDIKGVTKEDLAGKTIGVQV 166 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 TT F + EE R DA Sbjct: 167 STTHANYAEQTF----TDSTIKAYPTAEEYRLDLANGRLDAV 204 >gi|241895477|ref|ZP_04782773.1| L-cystine ABC superfamily ATP binding cassette transporter, binding protein [Weissella paramesenteroides ATCC 33313] gi|241871451|gb|EER75202.1| L-cystine ABC superfamily ATP binding cassette transporter, binding protein [Weissella paramesenteroides ATCC 33313] Length = 270 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 83/259 (32%), Gaps = 23/259 (8%) Query: 1 MYK----DFFVSILCLIILFFTSFSTNASILGD------IKKRGFLKCGINTGLVGFAEV 50 M + + ++I+ L+IL F + +K +G L G+ ++ Sbjct: 1 MKRTRVISYSIAIVILLILAVVYFGNRKNTTQKDAFQSELKTKGKLTIGLEGTYAPYSYR 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 NG GF+V+ RA++ + ++P L S++ D++ N T R Sbjct: 61 -KNGKLTGFEVEMGRAVAKKMGVKAD---FVPTKWDSLVAGLGSQKYDVVINNISETPAR 116 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + F + I K IS + +SG GT E A Sbjct: 117 KKVYK--FSNPYIYSRYALITPKNSQISHLKDISGKKFAEGTGTNNEQV------AKKYH 168 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPA 229 + + R R D A YA K E+ L I ++ Sbjct: 169 AKLVSSGDFSTTLSLLRTGRADGTINAAEAWYAYKKDNATDGLEYKDLSSEIDPVKVSAM 228 Query: 230 IIQGDTEWYNIVSWTHYAM 248 + D + + A+ Sbjct: 229 FNKKDPKTRAKFNKALAAI 247 >gi|260776172|ref|ZP_05885067.1| amino acid ABC transporter amino acid-binding protein [Vibrio coralliilyticus ATCC BAA-450] gi|260607395|gb|EEX33660.1| amino acid ABC transporter amino acid-binding protein [Vibrio coralliilyticus ATCC BAA-450] Length = 256 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 75/220 (34%), Gaps = 14/220 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K ++ GI F+ +A+G KGFDVD AL + K + + + Sbjct: 22 KDWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCKEM---QVKCKIVAQDWDGIIP 78 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 +L +++ D + T R+ + F FI K G+ L G I V Sbjct: 79 SLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGAGL-DFDNLDGQKIAV 135 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q TT + L D + K + + +E R A GD SAL L Sbjct: 136 QRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEGVLNKAG 192 Query: 211 PSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 + + ++ A+ + D + + Sbjct: 193 GEAYEFVGPSLTDPKWFGEGFGIAVRKQDKDLTKKLDAAI 232 >gi|58336906|ref|YP_193491.1| glutamine-binding protein precursor [Lactobacillus acidophilus NCFM] gi|227903464|ref|ZP_04021269.1| ABC superfamily ATP binding cassette transporter, glutamine-binding protein [Lactobacillus acidophilus ATCC 4796] gi|58254223|gb|AAV42460.1| glutamine-binding protein precursor [Lactobacillus acidophilus NCFM] gi|227868784|gb|EEJ76205.1| ABC superfamily ATP binding cassette transporter, glutamine-binding protein [Lactobacillus acidophilus ATCC 4796] Length = 272 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 84/231 (36%), Gaps = 10/231 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74 ++ ++ +K + G+ F G +GF++D RAL+ + Sbjct: 21 SACGNKSSQNVYRKVKADKQIVWGVRADTRLFGLTNVKTGKIEGFEIDLARALTKQMLGK 80 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +K ++ A R L++ ID + T R + F + G ++ Sbjct: 81 NAKADFVTTTANTRIPLLKNGNIDAVLATMTITPERAK--QVTFSKPYFPAGSSLLVPND 138 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I SV L+ ++ GTT + + F+ + +A +A++ A Sbjct: 139 SKIKSVKDLNNKTVLAVKGTTAVDDVHKSAPKA----RVLQFDDYGQAMSALKANQGVAL 194 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 T D L + + P + ++ + S +P A+ +G + + + Sbjct: 195 TTDNGLLAGIAQ--ENPG-YKLVGGVYSDAPYGIAVNKGQKDMADHIDKAL 242 >gi|148977577|ref|ZP_01814156.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrionales bacterium SWAT-3] gi|145963228|gb|EDK28495.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrionales bacterium SWAT-3] Length = 256 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 78/220 (35%), Gaps = 14/220 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ GI F+ +A+G KGFDVD AL + + + + + + Sbjct: 22 KEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCTEM---QVQCKIVAQDWDGIIP 78 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 +L +++ D + T R+ + F FI K G+ + LSG I V Sbjct: 79 SLLARKYDAIIAAMSITEERKK--KIDFTGKYALIPNKFIAKKGAGL-NFDDLSGQKIAV 135 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q TT + L D + + + +E R A GD SAL L Sbjct: 136 QRATTHDKYLTDNY---GDTVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEGVLNKAG 192 Query: 211 PSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 + + ++ A+ + D + + Sbjct: 193 GEAYEFVGPSLTDPKWFGEGFGIALRKQDKDLTKKLDAAI 232 >gi|154245544|ref|YP_001416502.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154159629|gb|ABS66845.1| extracellular solute-binding protein family 3 [Xanthobacter autotrophicus Py2] Length = 266 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 86/226 (38%), Gaps = 7/226 (3%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 IK+RG L I+ + + G DV+ + L+ + ++ +P++ R Sbjct: 30 IKQRGKLIVAIDVSHPPYGMLDDKAKETGSDVETAQLLAKDLG---VALEVVPVSGANRV 86 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 +L + ++D++ + T R+ + + K I S + L+G SI Sbjct: 87 PSLLANKVDVVIASFSITPERKKV--VDYSLPYGVIPVVVSAPKAMAIKSPADLAGKSIA 144 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V GTT ++ L+ K + + + +E A + D +S + Sbjct: 145 VARGTTADIELSRTIKDAKVAANIVRYEDEATAVTALATGQQDLLAAALSTANTVAEQ-- 202 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 P + + + ++ P+A + + D E V A + +L Sbjct: 203 NPGKTLEVKLEMAAYPMAVGLRKTDPELKAYVDEWVKANLANGKLN 248 >gi|242239814|ref|YP_002987995.1| glutamine ABC transporter periplasmic protein [Dickeya dadantii Ech703] gi|242131871|gb|ACS86173.1| cationic amino acid ABC transporter, periplasmic binding protein [Dickeya dadantii Ech703] Length = 248 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 85/245 (34%), Gaps = 20/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F + + + L F+ S A L +T V F + + + GFD+D Sbjct: 2 KSLFKASVAALALAFSISSHAAE--------KPLLVATDTAFVPFEFKQGD-KYVGFDID 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + P++ ALQ++ +D+ T R+ + F Sbjct: 53 LWDAIAKQL---NLTYTLKPMDFSGIIPALQTRNVDLALAGITITEERKR--AIDFSEGY 107 Query: 123 YFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ + I S + L+G + V++GT + DY KA+ F ++ Sbjct: 108 YNSGLLVMVRSENQEIKSEADLAGKVVAVKSGTGSV----DYAKANIKTKELRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 HR DA D + T + D I A +G + V Sbjct: 164 AYLELGTHRADAVLHDTPNILYFIKTAGNGK-FKAVGDSIKAQQYGIAFPKGSDDLREKV 222 Query: 242 SWTHY 246 + Sbjct: 223 NGALK 227 >gi|119387586|ref|YP_918620.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119378161|gb|ABL72924.1| amino acid ABC transporter substrate-binding protein, PAAT family [Paracoccus denitrificans PD1222] Length = 268 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 80/222 (36%), Gaps = 6/222 (2%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L DI G L+C + + GFDVD+C L++A+ ++ Sbjct: 23 DKLDDIIASGTLRCAVVLDFPPMGMRDESNTPVGFDVDYCNDLAAALGVKAEIVE---TP 79 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 ER AL S ++D+ +T TL R ++G+ + + K GI+S + Sbjct: 80 FPERIPALMSGRVDVGVASTSDTLERAKTVGM--SIPYFAFEMAVTANDKSGIASFEDMK 137 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G ++ AGT + L K ++ ++ A + DA + + Sbjct: 138 GKTVGATAGTFEAIALEKQVKEWGEG-TFRPYQTQADVFLALSQGQLDATVSTSTVAQSN 196 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 T + P V+ +A + + N ++ Sbjct: 197 VKTGNFPGISVVGKAPFDIDYVALFTNREEYGLINYLNLFVN 238 >gi|300718196|ref|YP_003742999.1| polar amino acid ABC transporter, periplasmic ligand binding protein [Erwinia billingiae Eb661] gi|299064032|emb|CAX61152.1| polar amino acid ABC transporter, periplasmic ligand binding protein [Erwinia billingiae Eb661] Length = 278 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 88/265 (33%), Gaps = 19/265 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L ++ S A L DIK G + GI+ + G+ G+ Sbjct: 1 MKK--ITLLLAAMLTLGASGLAQADTLADIKASGKMTVGIDPTFPPYEYTNDKGEIIGYS 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V ++++ + + + L S + + + R + F Sbjct: 59 VSIMQSVAKDLGVK---LDFQKTAFNGIIPGLISGSFNAEGSSLNVNAERAK--KVLFTV 113 Query: 121 ITYFDGQGFIMHKKK------GISSVSQLSGASICVQAGTTTELTLADYFKAHNMK---- 170 G ++ K + S+ L+G ++ + E L + + K Sbjct: 114 PYSKTVNGILIRKDEAGKFSAKPLSIESLAGLRGAAKSTSVPEQLLKTFNETLKSKGLKP 173 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 I + +++ +A R D DI+ L + P++ + ++ +A A Sbjct: 174 IEIISVDTLDQTVSALMTKRADFVIDDIAVLAPVAKKY--PAKLSQVGEVGPSQWMAWAT 231 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELG 255 + D +S AM + EL Sbjct: 232 RKDDVALNKAISDHILAMQKSGELA 256 >gi|290508436|ref|ZP_06547807.1| lysine/arginine/ornithine transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|289777830|gb|EFD85827.1| lysine/arginine/ornithine transport system substrate-binding protein [Klebsiella sp. 1_1_55] Length = 260 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 97/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L++ ++ S A++ I + G + F+ A GD+ GFD Sbjct: 1 MKKTIL--ALSLLVGMSSTASVFAALPQSI------RIGTDATYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L S I K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNELCSRI---KVKCTWVGSDFDSLIPSLKAKKIDAIISSLSITEKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I ++ L G + V G+T E D +++ + + ++ Sbjct: 108 KLYAADSRLIAAKGSPIQPTLEALKGKHVGVLQGSTQEAYANDRWRSQGVD--VVAYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + A R DA D A L + + + + D Sbjct: 166 DLIYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGPSVKDKKYFGDGTGIGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E E+ ++++K + +V Sbjct: 226 VELKAAFDKAL------GEIRKDGT-YDKMAKKYFDFNV 257 >gi|269960969|ref|ZP_06175338.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio harveyi 1DA3] gi|269834188|gb|EEZ88278.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio harveyi 1DA3] Length = 258 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 78/229 (34%), Gaps = 14/229 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + K+ ++ GI F+ + +G KGFDVD AL + K Q + + Sbjct: 18 SGMAQAKEWKTVRFGIEGAYPPFSWTETDGSIKGFDVDMANALCEEM---QVKCQIVAQD 74 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +L +++ D + T R+ + F FI K G+ L Sbjct: 75 WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYAQIPNKFIAKKGAGL-DFDNLK 131 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 + VQ TT + L D + + + +E R A GD SAL Sbjct: 132 DVKVGVQRATTHDKYLTDNY---GDDVEIVRYGSFDEAYLDLANGRIAAVLGDASALEEG 188 Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248 L + + ++ + A+ + D + + A+ Sbjct: 189 VLNKAGGEAYEFVGPSLTDPKWFGEGMGIAVRKQDKDLTKKLDAAIKAL 237 >gi|325661857|ref|ZP_08150478.1| hypothetical protein HMPREF0490_01216 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471835|gb|EGC75052.1| hypothetical protein HMPREF0490_01216 [Lachnospiraceae bacterium 4_1_37FAA] Length = 276 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 88/262 (33%), Gaps = 34/262 (12%) Query: 1 MYKDFFVSILCLIILFFTSFS---------TNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M ++ + + + I + ++ + G + + + Sbjct: 1 MKRNLAIFFMGMTIATMVLGGCGDKENISKKDGKQSESVEDKKTFTVGFDAEYPPYGYMD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 NG++ GFD++ A+ + K P+N + + L S ID + E Sbjct: 61 ENGEYTGFDLELAEAVCELEGWELVK---KPINWDSKDMELNSGAIDCIWNGFTMNGREE 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT-----------ELTL 160 F + Q ++ +K G+ ++ L G S+ VQA + + L Sbjct: 118 E---YTFSTPYVDNSQVIVVAEKSGMKTLEDLQGKSVGVQAASAALDLLQSEEEGGQKAL 174 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 AD F A N F +A DA D A R + IL + Sbjct: 175 ADTFSALN------EFADYNTAFTELQAGALDALAID--VGVANYQIKSRGEGYQILEET 226 Query: 221 ISKSPLAPAIIQGDTEWYNIVS 242 ++ A +G+ E ++V+ Sbjct: 227 LNTEQYAIGFKKGNQELCDVVN 248 >gi|291454092|ref|ZP_06593482.1| secreted protein [Streptomyces albus J1074] gi|291357041|gb|EFE83943.1| secreted protein [Streptomyces albus J1074] Length = 348 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 83/250 (33%), Gaps = 15/250 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T+ + + G +K G + +G G DVD AL + + Sbjct: 80 TAAPLADKLPKKYQDSGVVKVGSDIAYPPVEFKDKDGKTVGLDVDLAAALGEQLGVE--- 136 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI----------SLGLAFRPITYFDGQ 127 +++ L+SK+ D+ T R+ G+ F Sbjct: 137 LKFENGTFDTLLGGLRSKRYDVAMSAMTDTKARQEGLDSETGKKVGEGVDFVDYFTAGVS 196 Query: 128 GFIMH-KKKGISSVSQLSGASICVQAGTTTELTL-ADYFKAHNMKYHPIVFERVEEIDAA 185 + K +GI + L G I VQ GT + A+ K + F+ ++ Sbjct: 197 IYTNKGKDQGIKTWQDLCGKKIVVQRGTVSHDLAKAESKKCEKGEIKMETFDNDQQAQTR 256 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R+ DA + D T+ ++ + + +P AI + + E + + Sbjct: 257 LRSGGADAGSSDFPVAAYAVKTSGGGDHFELVGEQVEAAPYGIAISKSNPELRDAIKAAL 316 Query: 246 YAMVTAEELG 255 A++ + E Sbjct: 317 DAIIESGEYD 326 >gi|253751388|ref|YP_003024529.1| putative amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus suis SC84] gi|253753289|ref|YP_003026429.1| amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus suis P1/7] gi|253755880|ref|YP_003029020.1| amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus suis BM407] gi|251815677|emb|CAZ51265.1| putative amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus suis SC84] gi|251818344|emb|CAZ56168.1| putative amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus suis BM407] gi|251819534|emb|CAR45122.1| putative amino acid ABC transporter, extracellular amino acid-binding protein [Streptococcus suis P1/7] Length = 278 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 76/251 (30%), Gaps = 13/251 (5%) Query: 2 YKDFFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K ++ + L + +T + + + G + V + +G + Sbjct: 4 KKMMLGALALVTSLTLAACGSNDSATKSDNWTAYESEKSVTIGFDKTFVPMGFEQTDGSY 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D A+ +++ P++ + L + ID++ T R+ + Sbjct: 64 TGFDIDLANAVFEKYG---ITVKWQPIDWDLKETELNNGNIDLIWNGYSITDERKE--KV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHP 173 F + Q + K IS VS + + QAG++ K Sbjct: 119 LFTNPYMDNQQVLVTKKSSNISQVSDMKDKILGAQAGSSGYSVFESQPAILKDIVQNNDA 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + E + R D D +++ I+ A + Sbjct: 179 SQYATFNEALIDLKNDRIDGLLIDRVYANYYLQQEGIIADYNIIDAGFENEAFAVGARKS 238 Query: 234 DTEWYNIVSWT 244 DT ++ Sbjct: 239 DTTLVENINKA 249 >gi|172063791|ref|YP_001811442.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171996308|gb|ACB67226.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 266 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 74/227 (32%), Gaps = 13/227 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S A +L +K+ G LK + F A G +GFDVD +A+++ + P Q+ Sbjct: 24 SHAADLLDTVKQAGVLKIALEGTYPPFDYRNAEGQLEGFDVDVAKAVAARLGVKP---QF 80 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--IS 138 + LQ+ + D++ T R L F F + + Sbjct: 81 VTTEWSGILAGLQAGKFDVIVNQVAITPSR--QQALDFSMPYVFSSAQLLQRRNDTRAFK 138 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S+ +L G + V G+ + V+ E A R DA D Sbjct: 139 SLDELKGKKVGVTMGSNYVDLVKTVPA-----IDLQVYPGTPENLRDLAAGRIDAAVNDR 193 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + + N + + +G+ ++ + Sbjct: 194 -LMLSYLIKNSHLPLRPGSVLAGGEDRMGIPFRKGNPKFAKAIDDAV 239 >gi|254229002|ref|ZP_04922423.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Vibrio sp. Ex25] gi|151938470|gb|EDN57307.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Vibrio sp. Ex25] Length = 258 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 44/226 (19%), Positives = 76/226 (33%), Gaps = 14/226 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + K+ ++ GI F+ + +G KGFDVD AL + K + + + Sbjct: 18 SGVAQAKEWKTVRFGIEGAYPPFSWTETDGSLKGFDVDMANALCEEM---QVKCKIVAQD 74 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +L +++ D + T R+ + F FI K + L Sbjct: 75 WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGANL-DFDNLD 131 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G I VQ TT + L D + K + + +E R A GD SAL Sbjct: 132 GKKIAVQRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEG 188 Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 L + + ++ A+ + D + + Sbjct: 189 VLNKAGGDAYEFVGPSLTDPKWFGEGFGIAVRKQDKDLTKKLDAAI 234 >gi|329120282|ref|ZP_08248950.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Neisseria bacilliformis ATCC BAA-1200] gi|327462623|gb|EGF08946.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Neisseria bacilliformis ATCC BAA-1200] Length = 268 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 83/239 (34%), Gaps = 8/239 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + + +S ++ + N F + N + +GFDVD A++ A + Sbjct: 26 AANTPASSAPAAPQEGKVYRVAANAEFAPFEFMDTNNNVQGFDVDLINAMAKAGG---FR 82 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +++ F AL + +DIL+ T R+ + F Y Q ++ + K I Sbjct: 83 VEFKHQPWDSLFAALGNGDVDILASAVTITDERK--QSMDFSDPYYKITQVILVPQGKDI 140 Query: 138 SSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 S L + V GTT +L + A N FE + + DA Sbjct: 141 KSAEDLKKANKVGVVTGTTGDLAVGKLLGADN--GKIARFENITLVTKELENGGLDAVVS 198 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D + + N ++ + + +GDTE ++ + + E Sbjct: 199 DSAVVANYVKNNGNKGFTMVTVPDFPEENYGFVVRKGDTETQAALNAALKKVRESGEYD 257 >gi|49475425|ref|YP_033466.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella henselae str. Houston-1] gi|49238231|emb|CAF27441.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella henselae str. Houston-1] Length = 250 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 89/248 (35%), Gaps = 21/248 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +++ + L + NA LK + F+ V +N + +GFD Sbjct: 1 MK---LLAVALITNLVLFTQLANAKT---------LKIASDASYPPFSYVNSNNELQGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + + + L +K+ D + + T R + F Sbjct: 49 IDISYALCKKMNVE---CTIVTQDFEGMIPGLLAKKYDAIISSLAPTEER--LQKIDFTD 103 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y I+HK GI S ++ VQ+ TT + D++ A + ++ Sbjct: 104 AYYSTELVVIVHKDSGIKEISAEAFKDKNLGVQSNTTQAVYAEDHYAAEG--VNIKLYPT 161 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E+ +HR D D A ++ ++ +K P+A AI + + + Sbjct: 162 AIEVKRDLLSHRLDIVISDKLAAVNWLENEEKDCCQLLGSLKKTKLPIAIAIRKNNNDLK 221 Query: 239 NIVSWTHY 246 N + Sbjct: 222 NKFNEAIK 229 >gi|299783459|gb|ADJ41457.1| Glutamate ABC transporter substrate-binding component [Lactobacillus fermentum CECT 5716] Length = 273 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 89/283 (31%), Gaps = 22/283 (7%) Query: 1 MY--KDFFVSILCLIIL---FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKA 52 M K + + ++ + L IK + L G + F Sbjct: 1 MKVNKKWLALLSLAFLVVIGLAGCGKKSDDSLQQIKDKKVLTMGTSADYAPFEFTIMKNG 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 ++ G+D+ + ++ ++ ++ + LQ ++DI + T R+ Sbjct: 61 KKEYVGYDIMVAQKIADSLGVK---LKVQNMEFSSIISELQDHKVDIALAGMNVTPQRKK 117 Query: 113 SLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + F Y + + ++ K ++++ GAS VQ +T E KA + Sbjct: 118 --AVDFSKPYYTEQESLLVKKADADKYNTIADTKGASFGVQQSSTQETIAKTQTKAKLVS 175 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAP 228 + ++ + D V + S ++ Sbjct: 176 ESLVTGL-----ATDLKSGKLDGVVLAKKVAEQYVAQYPDTYAIAKVKITAPASMKEISI 230 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 AI + + + V+ + + EL K ++ + TN Sbjct: 231 AIPKNEPKLKAAVNKEITKLQKSGELDKLFKKAQEIQEQNTNK 273 >gi|260663430|ref|ZP_05864320.1| glutamate ABC transporter substrate-binding component [Lactobacillus fermentum 28-3-CHN] gi|260551971|gb|EEX25024.1| glutamate ABC transporter substrate-binding component [Lactobacillus fermentum 28-3-CHN] Length = 273 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 89/283 (31%), Gaps = 22/283 (7%) Query: 1 MY--KDFFVSILCLIIL---FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKA 52 M K + + ++ + L IK + L G + F Sbjct: 1 MKVNKKWLALLSLAFLVVIGLAGCGKKSDDSLQQIKDKKVLTMGTSADYAPFEFTIMKNG 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 ++ G+D+ + ++ ++ ++ + LQ ++DI + T R+ Sbjct: 61 KKEYVGYDIMVAQKIADSLGVK---LKVQNMEFSSIISELQDHKVDIALAGMNVTPQRKK 117 Query: 113 SLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + F Y + + ++ K ++++ GAS VQ +T E KA + Sbjct: 118 --AVDFSKPYYTEQESLLVKKVDADKYNTIADTKGASFGVQQSSTQETIAKTQTKAKLVS 175 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAP 228 + ++ + D V + S ++ Sbjct: 176 ESLVTGL-----ATDLKSGKLDGVVLAKKVAEQYVAQYPDTYAIAKVKITAPASMKEISI 230 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 AI + + + V+ + + EL K ++ + TN Sbjct: 231 AIPKNEPKLKAAVNKEITKLQKSGELDKLFKKAQEIQEQNTNK 273 >gi|56750285|ref|YP_170986.1| polar amino acid transport system substrate-binding protein [Synechococcus elongatus PCC 6301] gi|81300085|ref|YP_400293.1| extracellular solute-binding protein [Synechococcus elongatus PCC 7942] gi|56685244|dbj|BAD78466.1| polar amino acid transport system substrate-binding proetin [Synechococcus elongatus PCC 6301] gi|81168966|gb|ABB57306.1| extracellular solute-binding protein, family 3 [Synechococcus elongatus PCC 7942] Length = 260 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 92/234 (39%), Gaps = 18/234 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + + L F+ + ++ A+ L IK+RG+L G+ + + A G W+GF Sbjct: 11 RRWLLLGTSVLASFFYGANTSGTIAADLETIKRRGYLIVGVQANVAPLSWQDAQGQWQGF 70 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VD R+L++ + + + +++ L +++R AL + ++D+L T R+ F Sbjct: 71 EVDLARSLAAELLGNSAAVRFEGLQSRDRLPALLADRVDLLIAQMTVTDARQRVAQ--FS 128 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y D G + + + V G++ L + + Sbjct: 129 RPYYRDRIGLLTRRGIT-------QPQRVAVLQGSSAIPLLRWQAPE----LALVGVKSY 177 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 A + D D L + +DR + +LP PLA A+ QG Sbjct: 178 AAAQTALDRGQVDGIAADRLVLQQWQRQSDR---YQLLPQQWGDFPLAIALPQG 228 >gi|297192144|ref|ZP_06909542.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486] gi|197720210|gb|EDY64118.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486] Length = 357 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 39/244 (15%), Positives = 84/244 (34%), Gaps = 14/244 (5%) Query: 16 FFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 S + A L +I+ +G +K G + + G D+D +AL + + Sbjct: 90 GTASAAPLADKLPKEIRDKGVIKVGSDIAYAPMEFMDEGNKPAGVDIDIAKALGKVLGVE 149 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR------EISLGLAFRPITYFDGQG 128 Q+ + L + + + DI+ + T R + G F + G Sbjct: 150 ---FQFENSTFDQLVLGMNNGRTDIVMSSMTDTKERQQGATEDAKGGADFVN-YFKAGSA 205 Query: 129 FIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE-EIDAA 185 ++ K ++++ L G ++ Q GT E L + K + + Sbjct: 206 ILVQKGNPKQVTTLDDLCGLTVAAQRGTANEALLKETQKKCGSDKIKEFISDQDTDSITQ 265 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + R DA D +L ++ + I +P A+ + +T+ + + Sbjct: 266 LQTKRADAVITDFPVALYNELNAGGGKLFEVVGEQIDAAPYGIAVSKKNTQLRDALQAAV 325 Query: 246 YAMV 249 ++ Sbjct: 326 QKII 329 >gi|300310886|ref|YP_003774978.1| amino acid ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gi|300073671|gb|ADJ63070.1| ABC-type amino acid transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 265 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 83/249 (33%), Gaps = 10/249 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 L ++ A L DI+K G +K G+ + V ++ +G D+D R Sbjct: 7 AIAASLGLMAVAVHPAMADTLADIQKAGVVKIGVPQDFAPYGSVTSDLQLQGLDIDVARL 66 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + + + R LQ+ +ID++ RE + F Sbjct: 67 VAKGMGVKAELVP---VPISSRMAFLQTHKIDLIISTLGKNAEREKV--IDFSQGYAPYN 121 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++ + L+ ++ V T +L L D +E + AAY Sbjct: 122 NSVFGVAAIKVAGPADLANQTVGVARSTFEDLMLTDSVPK---STVIKRYEDNNGLIAAY 178 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + A L P+ +L II+ S + +G+ V+ Sbjct: 179 VSGQVQLVGTGD--FVAYALAEKTPANKPLLKYIINVSTCYVGMNKGEPALMAKVNEALT 236 Query: 247 AMVTAEELG 255 A + EL Sbjct: 237 ASKKSGELN 245 >gi|289642305|ref|ZP_06474453.1| extracellular solute-binding protein family 3 [Frankia symbiont of Datisca glomerata] gi|289507837|gb|EFD28788.1| extracellular solute-binding protein family 3 [Frankia symbiont of Datisca glomerata] Length = 286 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 90/260 (34%), Gaps = 24/260 (9%) Query: 5 FFVSILCLIILFFTS-------------FSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51 + L S + + + G + G F Sbjct: 4 VLAGTVALAAAGCGSDTTGTEAETPAKPTFAAGTTAARLAEAGKVTVGTKFDQPLFGLKG 63 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 GD +GFDV+ + ++ + DP I ++ + +R A+Q ++D + R+ Sbjct: 64 LGGDVEGFDVEIAKIIADGLGIDPDDITFVETPSAQREGAIQQSRVDFIVATYTINDKRK 123 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVS---QLSGASICVQAGTTTELTLADYFKAHN 168 ++F Y GQ ++ K + + + A +C +G+T + +Y A N Sbjct: 124 --QLISFAGPYYQAGQDIMVKKDNTTITGPESLRATNAKVCSVSGSTPAEKIKEYADASN 181 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 ++F+ + A R + DA T D L L + I+ + P Sbjct: 182 ----IVLFDVYSKCADALRTGQVDAVTTDNVVLLGL--VDASGGAFKIVGKPFTTEPYGI 235 Query: 229 AIIQGDTEWYNIVSWTHYAM 248 I +GDT + + A Sbjct: 236 GIKKGDTAFCQFIDEQLTAA 255 >gi|170741318|ref|YP_001769973.1| extracellular solute-binding protein [Methylobacterium sp. 4-46] gi|168195592|gb|ACA17539.1| extracellular solute-binding protein family 3 [Methylobacterium sp. 4-46] Length = 263 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 83/251 (33%), Gaps = 14/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++L F+ +A +L D+ ++ + + + AN G D Sbjct: 1 MRRPILAALLAATAFVAMPFAAHADLLDDVLSAKKIRVATDLAIPPSGMIDANLKPTGSD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ + L+ + +++++ R +Q+ + D++ T R + F Sbjct: 61 VETAQLLAKDLG---LELEFVQTTGATRIPNVQTNKADLIISTLSVTPERAKV--IDFTK 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 K S L G +I V GTT + TL + + ++ Sbjct: 116 PYAALQSVVGCLKSVEAKSWPDLKGKTIAVSRGTTQDTTLTNM---KDRDLRLARYDDDA 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + + D + ++ PS I+ LA + +G+ + Sbjct: 173 TMVTAAVSGQADCIATSATI--VNQIGVKNPSRVYEPKVPITTFDLAMGVRKGEPRFVE- 229 Query: 241 VSWTHYAMVTA 251 A + Sbjct: 230 ---KLNAWIET 237 >gi|220929988|ref|YP_002506897.1| extracellular solute-binding protein family 3 [Clostridium cellulolyticum H10] gi|220000316|gb|ACL76917.1| extracellular solute-binding protein family 3 [Clostridium cellulolyticum H10] Length = 268 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 85/250 (34%), Gaps = 15/250 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 M K F + I + + I+K G L G + + V Sbjct: 5 MLKKLFCLFIVAAIGISIAGCGGGETMKRIEKTGKLVVGTSADYAPYEYHMLVDGKDTIV 64 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D+ ++ + ++Q + + +L + ++DI+ E + Sbjct: 65 GIDISIVEEIAKDMG---VQLQIVDTDFNGLLSSLNTNKVDIVIAGM--NPDEERKKSVD 119 Query: 118 FRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F I Y QG ++ + +V+ L + Q GTT E + + + + + Sbjct: 120 FSKIYYEAKQGVMVRAEDKDKYKTVADLKDKKVGAQLGTTQEKIVKEQIE----GVNLVS 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ ++ + + DA + + + N+ +P A A+ +G++ Sbjct: 176 LGKIPDLVMELKNKKIDALVVEFPV-ASGYVKNNDDLALTDIPVKDDTGGSAIAVKKGNS 234 Query: 236 EWYNIVSWTH 245 ++ + Sbjct: 235 NLVEQINKSL 244 >gi|313892375|ref|ZP_07825967.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Dialister microaerophilus UPII 345-E] gi|313119234|gb|EFR42434.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Dialister microaerophilus UPII 345-E] Length = 260 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 79/249 (31%), Gaps = 12/249 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +K L ++++ I ++ G T F V + + GFD+ Sbjct: 6 FKTILAIGAMAAALISAGCGSDSTTKNGIPP--VIRVGSETTFPPFEFVDGD-KYVGFDL 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A+ + SK+++ + A+QS QID+++ D T R + + Sbjct: 63 DLAEAVIKQMG---SKMEFKSMGFDALIPAVQSGQIDMIAAGMDATPERAKQVAFSDPYF 119 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + I L G ++ Q GT + + A+ + + Sbjct: 120 SENGYVIVTRKDNDTIHDWKDLEGKNVGAQVGTQSVELAQEAKAAN-----VKQLDSNSQ 174 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +A DA D + I+ ++ A+ + + E + V Sbjct: 175 AFMELQASTLDAVVLDRPVTMYYLNQGAD-KDLQIVGTPKPGPAMSLAVNKDNKELQDAV 233 Query: 242 SWTHYAMVT 250 + + Sbjct: 234 NKALKEIKE 242 >gi|300313610|ref|YP_003777702.1| amino acid ABC transporter/signal transduction system periplasmic protein/domain-containing protein [Herbaspirillum seropedicae SmR1] gi|300076395|gb|ADJ65794.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Herbaspirillum seropedicae SmR1] Length = 271 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 73/259 (28%), Gaps = 21/259 (8%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNASILGD---------IKKRGFLKCGINTGLVGF 47 M K F L + + G+ + F Sbjct: 1 MIKMFTRHARALALTAGFVGMLGLAACGKQEDKSATAAAPQAAAPARVYVVGVESAYAPF 60 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + D GFD+D +AL+ I + ++++P + F L D+L T Sbjct: 61 SSENEQKDVVGFDIDIMKALAKKIGIE---VKFVPTPFEGFFNFLAQGDRDLLISAITIT 117 Query: 108 LLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ +AF + Q + +S + L ++ Q+ T+ + + Sbjct: 118 DERKK--SVAFSEPYFVATQTIALPAADTKVSKMEDLKPLTVGTQSATSGDELVQQVLGK 175 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + F+ + DA D + N + K Sbjct: 176 N--SAKIKRFDSTPLALKELESGGVDAVVADEPVVKNYIANNPNSKLRTVTDPSFPKEDY 233 Query: 227 APAIIQGDTEWYNIVSWTH 245 A+ + D E ++ Sbjct: 234 GIAVRKDDPELLAKINKGL 252 >gi|251788514|ref|YP_003003235.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] gi|247537135|gb|ACT05756.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] Length = 240 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 81/222 (36%), Gaps = 10/222 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 A DI+KRG L+ + F V + +G+D+D L+ + K+Q +P+ Sbjct: 2 ADQWQDIQKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMAHYLADEM---KLKLQLVPV 58 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R LQ+ ++D++ + RE + F G K+ + + L Sbjct: 59 TSANRVPYLQTDKVDLVISSLGKNAEREKV--IDFSSAYAPFFLGVFGPKETDVGAPEAL 116 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G ++ V G ++ L + +E +AY + + + A Sbjct: 117 QGKTVGVTRGAVEDMVLTETAPK---TADIKRYEDNNTTLSAYMSGQVQYIATGNLVVAA 173 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + P++ + ++ SP + + + V+ Sbjct: 174 IA--EKNPAKAPVAKFMLKDSPCYIGLKKDEPALKAKVNELI 213 >gi|209526069|ref|ZP_03274601.1| extracellular solute-binding protein family 3 [Arthrospira maxima CS-328] gi|209493457|gb|EDZ93780.1| extracellular solute-binding protein family 3 [Arthrospira maxima CS-328] Length = 282 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 97/268 (36%), Gaps = 23/268 (8%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + +L LI+ + FT ++ ++L I++ G L+ G+ T V F+ + NG+ +G+ Sbjct: 1 MNQKLAIPLLSLILSVGFTGYAAAETVLEQIERTGVLRAGVRTDAVPFSYLNDNGEIEGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD R + + + P +++ + ++RF +Q +D++ T T RE G+ Sbjct: 61 SVDLIRLIHGRLEEKLNQPIRLEMTTVTLQDRFEQVQKGNLDLVCEATSITAERE--NGV 118 Query: 117 AFRPITYFDGQGFIMHKKKGIS-----------SVSQLSGASICVQAGTTTELTLADYFK 165 F + G ++ + S L +I TT + L + Sbjct: 119 DFSTPFFVTGIQMLVKTENRDRLDPTQLSETDISTVSLERVTIGFLESTTADSELRPVYP 178 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL--PDIISK 223 + E +A D L + ++ L ++ Sbjct: 179 EAQWE----AVPSRAEGIRRLQAGELQGIVSDGILLLGQLWKDGSDRQNFQLVPSQPLTF 234 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 + EW +V+ T + Sbjct: 235 ENYGCILPMNSREWSRVVNSTIASPENT 262 >gi|124485037|ref|YP_001029653.1| hypothetical protein Mlab_0210 [Methanocorpusculum labreanum Z] gi|124362578|gb|ABN06386.1| extracellular solute-binding protein, family 3 [Methanocorpusculum labreanum Z] Length = 263 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 90/263 (34%), Gaps = 18/263 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F ++ +++ + ++ GI+ ++ V +G++ GFD Sbjct: 1 MDRKVFFGVIIALLVVSAVLTAGCVSNQT--EKKTYIVGIDGDYPPYSYVDESGNFVGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ + ++ + ++ + AL + +ID++ T R + F Sbjct: 59 VESIQWIAEQ---EGFNVEIKAVAWDGIIPALLANKIDMVYSGMTITPERAA--QVTFSK 113 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLA--DYFKAHNMKY-----H 172 + QG + ++ + +I VQ + + + D+F Sbjct: 114 PYWSVDQGVAVKNGSTVTLDQFKAGNLTIGVQRSCSADQYIQSDDFFGQAKYDQMVKDGK 173 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +++ + A A D + V+L I + A A+ Sbjct: 174 IKLYDTFPQSMVALENGLVQAVIFDDVNIKDYI---KGKDGIVMLATIPTGEEYAVAMRN 230 Query: 233 GDTEWYNIVSWTHYAMVTAEELG 255 GDTE +++ ++ +E+ Sbjct: 231 GDTELQKLINDGLTKLMASEKWN 253 >gi|70726105|ref|YP_253019.1| hypothetical protein SH1104 [Staphylococcus haemolyticus JCSC1435] gi|68446829|dbj|BAE04413.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 484 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 33/257 (12%), Positives = 81/257 (31%), Gaps = 21/257 (8%) Query: 1 MYKDFFVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51 M K V + ++I + + + IK RG L+ G++ Sbjct: 1 MKKLTKVLAIAILISLTLIYIQPMALADEDATWNKIKDRGELRVGLSADYAPLEFEKTKN 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++ G D++ + ++ + K++ + + AL++ +ID++ T R+ Sbjct: 61 GKTEYAGVDIELAKKIAKD---NHLKLKIVNMQFDSLLGALKTGKIDVIISGMTTTPERK 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + F G ++ K +S + I Q G+ E + Sbjct: 118 K--EVDFSEPYMETGNVMLIRKNNNDTYHKLSDFNNKKIGAQKGSEQEKIAQQEIE---- 171 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 R+ + A ++ + D + ++ + K P A Sbjct: 172 NAQISSLNRLPDAILALKSKKIDGLVIEKPV-ADAYAKQNKDLNIAHVSFNEEKKPTVIA 230 Query: 230 IIQGDTEWYNIVSWTHY 246 + + ++ + Sbjct: 231 LPKDSPILLEHLNHSIK 247 >gi|255655793|ref|ZP_05401202.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile QCD-23m63] gi|296450969|ref|ZP_06892716.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Clostridium difficile NAP08] gi|296879065|ref|ZP_06903061.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Clostridium difficile NAP07] gi|296260187|gb|EFH07035.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Clostridium difficile NAP08] gi|296429938|gb|EFH15789.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Clostridium difficile NAP07] Length = 267 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 84/258 (32%), Gaps = 16/258 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKR-------GFLKCGINTGLVGFAEVKAN 53 M + I+L S + K + + G + V + Sbjct: 1 MKNILKKVGIFTIMLGLLGGVVGCSKPDNEKDKDASKESKKEVVVGFDNTFVPMGFLDEK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ-IDILSRNTDWTLLREI 112 G+ GFDVD + + ++++ P++ + L + +D+L T R+ Sbjct: 61 GNTVGFDVDLAKETFKRLG---MEVKFQPIDWSMKETELNDSKTVDVLWNGYSITDERKK 117 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA--DYFKAHNMK 170 +++ + Q + I+S + L + Q G+T + F Sbjct: 118 I--VSYTEPYLQNKQIIVTLSDSKINSKADLKDKEVGTQQGSTALDAVEKDKDFMNSLKG 175 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 P++++ ++ R A GD + + ++ +L D A Sbjct: 176 GAPVLYDTYDKALRDLEIGRTSAVVGDEVLIR-YYMGQKGEDKYKVLKDDFGLEDYVVAT 234 Query: 231 IQGDTEWYNIVSWTHYAM 248 + + E ++ T M Sbjct: 235 SKENPELCEKINETLKEM 252 >gi|184155854|ref|YP_001844194.1| glutamate ABC transporter substrate-binding component [Lactobacillus fermentum IFO 3956] gi|227515552|ref|ZP_03945601.1| glutamate ABC superfamily ATP binding cassette transporter substrate-binding protein [Lactobacillus fermentum ATCC 14931] gi|183227198|dbj|BAG27714.1| glutamate ABC transporter substrate-binding component [Lactobacillus fermentum IFO 3956] gi|227085982|gb|EEI21294.1| glutamate ABC superfamily ATP binding cassette transporter substrate-binding protein [Lactobacillus fermentum ATCC 14931] Length = 273 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 89/283 (31%), Gaps = 22/283 (7%) Query: 1 MY--KDFFVSILCLIIL---FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKA 52 M K + + ++ + L IK + L G + F Sbjct: 1 MKVNKKWLALLSLAFLVVIGLAGCGKKSDDSLQQIKDKKVLTMGTSADYAPFEFTIMKNG 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 ++ G+D+ + ++ ++ ++ + LQ ++DI + T R+ Sbjct: 61 KKEYVGYDIMVAQKIADSLGVK---LKVQNMEFSSIISELQDHKVDIALAGMNVTPQRKK 117 Query: 113 SLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + F Y + + ++ K ++++ GAS VQ +T E KA + Sbjct: 118 --AVDFSKPYYTEQESLLVKKADADKYNTIADTKGASFGVQQSSTQETIAKTQTKAKLVS 175 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAP 228 + ++ + D V + S ++ Sbjct: 176 ESLVTGL-----ATDLKSGKLDGVVLAKKVAEQYVAQYPDTYAIAKVKITAPASMKEISI 230 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 AI + + + V+ + + EL K ++ + TN Sbjct: 231 AIPKDEPKLKAAVNKEITKLQKSGELDKLFKKAQEIQEQNTNK 273 >gi|51245411|ref|YP_065295.1| amino acid ABC transporter, periplasmic substrate-binding protein [Desulfotalea psychrophila LSv54] gi|50876448|emb|CAG36288.1| probable amino acid ABC transporter, periplasmic substrate-binding protein [Desulfotalea psychrophila LSv54] Length = 261 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 83/247 (33%), Gaps = 14/247 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59 + F + L + T S A S L + G ++ G F V G+++GF Sbjct: 6 KQKFCFGFIVLSLFLLTGISAQADSSLQQVVDSGEIRVGFCAQYPPFESVNVKTGEFEGF 65 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+ +A++ + I + L+ D+L + R F Sbjct: 66 DIALAKAIADEMGVAAVLID---AEWQGLLGGLKKGDYDVLITCMAKSESR--RDNTNFS 120 Query: 120 PITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Y ++ + I LSG I VQ G+ +E LAD + + Sbjct: 121 DVYYTLPDVIVVRQDDTIVKDKDDLSGKVIGVQLGSGSEQ-LADSME--GRLKEIKRYNY 177 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E +A R DA S + I+ + ++K+ + + +G Sbjct: 178 NPEAFTDLKAKRIDAVFVG---YAYAVNHMKSDSAYKIVDEPLAKADIVAVLDKGADALT 234 Query: 239 NIVSWTH 245 ++ + Sbjct: 235 QKINESL 241 >gi|120403417|ref|YP_953246.1| extracellular solute-binding protein [Mycobacterium vanbaalenii PYR-1] gi|119956235|gb|ABM13240.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium vanbaalenii PYR-1] Length = 279 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 76/223 (34%), Gaps = 10/223 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G G + +G GFDVD ++ + P KI++ + +R +Q+ Sbjct: 43 TIVIGTKFDQPGLGQKNPDGTMSGFDVDVATYVAGELGYTPDKIEWKESPSAQRENLIQN 102 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASI-CVQA 152 Q+ ++ T R+ ++F GQ ++ I+ + L I C + Sbjct: 103 GQVTFIAATYSITDARKE--KVSFAGPYLITGQSLLVRSDNTDITGEASLENNKILCSVS 160 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T + D ++ A + DA T D L + P Sbjct: 161 GSTPAQKIKD----KYQGVQLQQYDTYSACIDALKNGAVDAVTTDEVILAGYAAQS--PG 214 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 I+ + S+ + + DTE ++ M + Sbjct: 215 AFKIVGEPFSEERYGIGLKKDDTELRTKINDALKKMEESGAWK 257 >gi|227114777|ref|ZP_03828433.1| histidine-binding periplasmic protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 259 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 97/279 (34%), Gaps = 29/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V L LI+ S + +I K +K G + F A+G+ GFD Sbjct: 1 MKKLIKVLPLALIL-------AAGSAMAEIPKN--IKIGTDPTYAPFESKNASGELVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + L I + ++ + +L++K+ID + + T R +AF Sbjct: 52 IDLAKELCKRI---QANCTFVESDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFTE 106 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I +++ L G + V +T E ++ + + ++ Sbjct: 107 KLYAANSRLIAKKGTSIEPTLASLGGKRVGVLQASTQEAFANANWQPKGVD--VVAYQNQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I A A R DA D A L D ++ + + + D Sbjct: 165 DLIYADLAAGRIDAAFQDEVAASEGFLKLDAGKDYEFAGPAVKDDKFFGVGTGMGLRKAD 224 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE + EE+ + +K + DV Sbjct: 225 TELKAALDKAF------EEMRKDGT-YDTFAKKYFDFDV 256 >gi|310644684|ref|YP_003949443.1| amino acid abc transporter, amino acid-binding protein/permease protein, his/glu/gln/arg/opine family [Paenibacillus polymyxa SC2] gi|309249635|gb|ADO59202.1| Amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Paenibacillus polymyxa SC2] Length = 269 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 76/239 (31%), Gaps = 10/239 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V+ + L ++ T + S L G FA + G+D Sbjct: 1 MKKSALVAAIGLSLVLLTGALSGCSSKEAASGDKVLYVGTQNDYPPFAFTNDKNELTGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ + + + D KI+++P FLAL + ++ I++ RE F Sbjct: 61 VEVVKEIDKKL--DGYKIEFVPSGWDAIFLALDANKVQIIADEVAKNPEREK--KYLFSD 116 Query: 121 I-TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE- 177 + I+ K + I S+ L G + G + L Y + K + Sbjct: 117 ESYFSAQSVIIVKKGRTDIHSLKDLEGKKVAASVGDSYTQLLEQYNAKNGNKIILKYNDT 176 Query: 178 -RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + R DAY D A + + + + + + Sbjct: 177 GTSSDNLQDVQNGRVDAYVNDPVMAAA--TIKKEGLQVEAVGEPVQSDNINLVFKKDKQ 233 >gi|251789979|ref|YP_003004700.1| cationic amino acid ABC transporter periplasmic binding protein [Dickeya zeae Ech1591] gi|247538600|gb|ACT07221.1| cationic amino acid ABC transporter, periplasmic binding protein [Dickeya zeae Ech1591] Length = 249 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 78/252 (30%), Gaps = 24/252 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L +F+ A+ ++ + F + A GFD Sbjct: 1 MKKLILAALLAGTAFSSMTFNAMAAE--------TIRFAASATYPPFESLDAGNQIVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + AL+ ++ D + D T R + F Sbjct: 53 IDLANALCKQL---QVTCSFTNQAFDSLIPALKFRRYDAVISGMDITPERSKQVA--FTQ 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K S++ L G I ++ GTT + L + + ++ + Sbjct: 108 PYYANSAIVIAQKG-KFHSLADLKGKRIGIENGTTHQKFLQEKHPE----VTTVPYDSYQ 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P + + + L A+ + Sbjct: 163 NALIDLKNGRLDGVFGDTAVVNEWL--KANPDLATVGEKVTDPAYFGIGLGIAVRPDNQA 220 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 221 LLEKLNSALNAI 232 >gi|330939294|gb|EGH42689.1| extracellular solute-binding protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 254 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 83/254 (32%), Gaps = 27/254 (10%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 YK + + ++F+ +K GI F A+G GFD Sbjct: 4 YKKILLIAAATLAFSGSAFAE------------KMKMGIEGAYPPFNNKDASGQVVGFDY 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + +AL + + + + + AL + + D L + T RE + F Sbjct: 52 EIGQALCAKMKVECEAVT---SDWDGIIPALMASKFDFLISSLSITEAREEV--VDFTNP 106 Query: 122 TYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 Y + FI K I + L G S+ Q T L D P + Sbjct: 107 YYSNKLQFIAPKTSSIDVSSIEKAKESLVGKSVGAQRSTLAATWLEDKLG----IMDPKL 162 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ E + R DA D + + + ++ + A+ +G+T Sbjct: 163 YDTQENAFLDLSSGRVDAMLADKYVSFEWLKSEAGQNFEFKGEPVVENDKIGIAVRKGNT 222 Query: 236 EWYNIVSWTHYAMV 249 E + ++ ++ Sbjct: 223 ELRDRLNVALKEII 236 >gi|296876760|ref|ZP_06900808.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus parasanguinis ATCC 15912] gi|296432262|gb|EFH18061.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus parasanguinis ATCC 15912] Length = 275 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 77/252 (30%), Gaps = 13/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSFST-----NASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M + + L ++F T+ +K + G + V + +G Sbjct: 1 MKRVIPWLLGVLSLVFLTACGQTVSDPKVDNWQKYQKEQSITIGFDNTFVPMGFEQKDGT 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + GFD+D + + + + P++ + L++ ID + T R Sbjct: 61 YAGFDIDLANQVFESYG---IHVNWQPIDWDMKETELKNGTIDAIWNGYSATDER--RES 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI- 174 +AF + Q + K GI SV + + Q G++ + K K Sbjct: 116 VAFTKPYMKNEQVLVTKKASGIQSVDGMKEKRLGAQTGSSGYMDFEANPKILKNKVKNQK 175 Query: 175 --VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++ E + R D D T ++ + P A + + Sbjct: 176 ATQYQSFNEALIDLQNDRIDGLLIDRVYANYYLQTEGILKDYNVFPVGFETESFAVGVRK 235 Query: 233 GDTEWYNIVSWT 244 D + Sbjct: 236 SDKTLKKKIDEA 247 >gi|241763926|ref|ZP_04761969.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241366821|gb|EER61253.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 249 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 77/213 (36%), Gaps = 14/213 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ G + V NG GFD++ A++ + +++++ ++ K L S Sbjct: 28 VLRVGTDATFPPMEFV-ENGKRTGFDIELVEAIAKTMGK---QVEWVDIDFKGLIPGLIS 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAG 153 K+ D+ T R+ + F Y G ++ I+ ++ L G + VQ G Sbjct: 84 KRFDMAVSAIYITDERKKV--VDFTDSYYAGGLVVMVKADNKAINKLADLDGKKVSVQVG 141 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 T + L + F + E+ +E+ R DA A + RP Sbjct: 142 TKSVAYLTEKFPK----VQRVEVEKNQEMFNLVDIGRADAAVTGKP--AAFQYVRTRPG- 194 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 +L + ++ A+ + E + Sbjct: 195 LRVLDEQLTTEEYGMALRKDTPELTKAFNGAIN 227 >gi|259047506|ref|ZP_05737907.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding cassette transporter, permease protein [Granulicatella adiacens ATCC 49175] gi|259035697|gb|EEW36952.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding cassette transporter, permease protein [Granulicatella adiacens ATCC 49175] Length = 268 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 89/266 (33%), Gaps = 21/266 (7%) Query: 1 MYKDFFVSILCLIILFFTSF------STNASILGDIKKRGFLKCGINTGLVGFAE---VK 51 M K + +L + +L + ST +++L I + + G F Sbjct: 1 MKKIIAMLMLVMGLLAACTQQPTIENSTGSAVLDRIYTKKKIVIGTTADYPPFEWHYVKD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+D AL A+ + ++ + A+++ ++D++ T R Sbjct: 61 GKDSVVGIDIDIANALGEALGVE---VEIREMEFNFLIAAMKAGKVDLVLAGITPTEERS 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + F I Y ++ K +++ GA++ Q GT+ E + D N+ Sbjct: 118 KEVA--FSNIYYDSHMVAVVKKTDADKYTTIDAFDGANVGAQKGTSQEGIVKDTLTGANL 175 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 P + A + + DA D + + + + A Sbjct: 176 TSQPK----NPTLILALQQGKLDAVIMDN-IAADEFVKANSDLTVASVEIPSEDAGTAAV 230 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255 +G+ + V A+ + +L Sbjct: 231 AQKGNEVFLKKVQEVLDALEASGKLK 256 >gi|39998495|ref|NP_954446.1| amino acid ABC transporter periplasmic amino acid-binding protein [Geobacter sulfurreducens PCA] gi|39985442|gb|AAR36796.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Geobacter sulfurreducens PCA] gi|298507440|gb|ADI86163.1| polar amino acid/opine ABC transporter, periplasmic amino acid-binding protein [Geobacter sulfurreducens KN400] Length = 251 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 36/247 (14%), Positives = 75/247 (30%), Gaps = 16/247 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + + + + + A G + + V AN GFD+D Sbjct: 5 RRTLMVLTLAAVCLTAAVPRQAEAAGR-----TVTVATDATWPPMEMVDANKKIVGFDID 59 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 F A++ +Q+ F L + + D + + T R+ F Sbjct: 60 FMNAIAKEAG---FAVQFKNTAWDGIFAGLGAGRYDAIISSVTITEERKK--QYDFSDPY 114 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 GQ ++ K + +++S L G + Q GTT + ++ + Sbjct: 115 INIGQILVVPKTEKATNLSGLKGKKVGAQIGTTGAFEIKKV-----QGVELKNYDEIGLA 169 Query: 183 DAAYRAHRCDAYTGDISALY-ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A R D + ++ I+ + + +GD E ++ Sbjct: 170 FEDMAAGRIVGVVCDEPTAAHYALQKAEYKNKFKIVGKSFTAESYGIVVKKGDKELLALI 229 Query: 242 SWTHYAM 248 + A+ Sbjct: 230 NKGIKAV 236 >gi|329121306|ref|ZP_08249932.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Dialister micraerophilus DSM 19965] gi|327469715|gb|EGF15181.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Dialister micraerophilus DSM 19965] Length = 260 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 79/249 (31%), Gaps = 12/249 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +K L ++++ I ++ G T F V + + GFD+ Sbjct: 6 FKTILAIGAMAAALISAGCGSDSTTKNGIPP--VIRVGSETTFPPFEFVDGD-KYVGFDL 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A+ + SK+++ + A+QS QID+++ D T R + + Sbjct: 63 DLAEAVIKQMG---SKMEFKSMGFDALIPAVQSGQIDMIAAGMDATPERAKQVAFSDPYF 119 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + I L G ++ Q GT + + A+ + + Sbjct: 120 SENGYVIVTRKDNDTIHDWKDLEGKNVGAQVGTKSVELAQEAKAAN-----VKQLDSNSQ 174 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 +A DA D + I+ ++ A+ + + E + V Sbjct: 175 AFMELQASTLDAVVLDRPVTMYYLNQGAD-KDLQIVGTPKPGPAMSLAVNKDNKELQDAV 233 Query: 242 SWTHYAMVT 250 + + Sbjct: 234 NKALKEIKE 242 >gi|270260986|ref|ZP_06189259.1| hypothetical protein SOD_a02110 [Serratia odorifera 4Rx13] gi|270044470|gb|EFA17561.1| hypothetical protein SOD_a02110 [Serratia odorifera 4Rx13] Length = 247 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 81/247 (32%), Gaps = 22/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F VS+ L + F S L +T V F + + + GFD Sbjct: 1 MKSIFKVSLAALSLAFAVSSHAA----------DKLIVATDTAFVPFEFKQGD-KYVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + D P++ ALQ+K ID+ T R+ + F Sbjct: 50 IDLWAAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITEERKK--AIEFSD 104 Query: 121 ITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G + + SV L G + V++GT + DY K + F + Sbjct: 105 GYYKSGLLVMVNANDDSVKSVKDLDGKVVAVKSGTGSV----DYAKQNIKTKDLRQFPNI 160 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + + + + + + A +G E Sbjct: 161 DNAYMELGTKRADAVLHDTPNIL-YFIKTAGAGKFKTVGESLEAQQYGIAFPKGSDELRV 219 Query: 240 IVSWTHY 246 V+ Sbjct: 220 KVNGALK 226 >gi|166366371|ref|YP_001658644.1| extracellular solute-binding protein [Microcystis aeruginosa NIES-843] gi|166088744|dbj|BAG03452.1| extracellular solute-binding protein [Microcystis aeruginosa NIES-843] Length = 299 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 111/307 (36%), Gaps = 22/307 (7%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K V + C++ +F S S +++ + + GFL G + ++ + G+ G+ Sbjct: 1 MKKILQLVGLGCILPMFLASASLAETVVEKVARTGFLTVGTRFDAIPYSYIDDKGELVGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D + + P +Q + N + L ++ +T +T R + Sbjct: 61 SMDVLERIRKRLETRLGRPVTLQMIEANQPGEKINLIRSGEIDIACSTAFTWERAKV--V 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G + K +S+ L G I + + + + Sbjct: 119 DFSISYSISGIRILAKKGSNLSTPQSLIGKRIALVPTSAAVDVIKLVQPQA---TIVTTY 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDT 235 VEE A + + DA GD +L L D P + I+P+ + +A + + ++ Sbjct: 176 STVEEAIEALKTGKIDAIAGDSISLAGTILR-DNPKIYEIVPEEALANFGIACMVPENNS 234 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295 + + V++ + + Q I T + R+ G I L L + Sbjct: 235 TFLDDVNYAI--------VKMMQDYITN--DTATVSQIDRWFGSQGMVPIPPEL-LKGFF 283 Query: 296 TYRIIRH 302 +++I H Sbjct: 284 AFKVIEH 290 >gi|312963937|ref|ZP_07778408.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] gi|311281972|gb|EFQ60582.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] Length = 273 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 83/259 (32%), Gaps = 25/259 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGF 59 M ++ L L +L ++ + + L ++++ L G+ F+ + GF Sbjct: 1 MKLKPLLA-LGLTMLAASTQAFGGATLDRVEQKKEL-VGVLMESYPPFSFLNDQNQLDGF 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD +A++ + ++ + S + DI + + R F Sbjct: 59 DVDVAKAVAQKLGVK---LRLETPSWDVIAAGRWSGRYDICICSMTPSKARAEV--FDFP 113 Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHN---------- 168 Y +++ I + + LSG + + + ++ E L Sbjct: 114 VEYYASPAVIVVNATDDRIHNAADLSGKKVGLTSASSYESYLNKNLVIEGAEDKQLRYPF 173 Query: 169 MKYHPIVFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 ++ R DA + L + + + + + P Sbjct: 174 ENVQIAPYDTDNVAFQDLGLGAGVRLDAILTN---LVTAQPRLSQDKRFKLAGEPLYSEP 230 Query: 226 LAPAIIQGDTEWYNIVSWT 244 + AI +GD +W + V Sbjct: 231 NSVAIEKGDPQWDSKVREV 249 >gi|302023526|ref|ZP_07248737.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus suis 05HAS68] Length = 278 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 76/251 (30%), Gaps = 13/251 (5%) Query: 2 YKDFFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K ++ + L + +T + + + G + V + +G + Sbjct: 4 KKMMLGALALVTSLTLAACGSNDSATKSDNWTAYESEKSVTIGFDKTFVPMGFEQTDGSY 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D A+ +++ P++ + L + ID++ T R+ + Sbjct: 64 TGFDIDLANAVFEKYG---ITVKWQPIDWDLKETELNNGNIDLIWNGYSITDERKE--KV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHP 173 F + Q + K IS VS + + QAG++ K Sbjct: 119 LFTNPYMDNQQVLVTKKSSNISQVSDMKDKILGAQAGSSGYSVFESQPAILKDIVQNNDA 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + E + R D D +++ I+ A + Sbjct: 179 SQYATFNEALIDLKNDRIDGLLIDRVYANYYLQQEGIIADYNIIDAGFENEAFAVGARKS 238 Query: 234 DTEWYNIVSWT 244 DT ++ Sbjct: 239 DTTLVENINKA 249 >gi|229068524|ref|ZP_04201825.1| Extracellular solute-binding protein family 3 [Bacillus cereus F65185] gi|229078175|ref|ZP_04210750.1| Extracellular solute-binding protein family 3 [Bacillus cereus Rock4-2] gi|228705121|gb|EEL57532.1| Extracellular solute-binding protein family 3 [Bacillus cereus Rock4-2] gi|228714666|gb|EEL66540.1| Extracellular solute-binding protein family 3 [Bacillus cereus F65185] Length = 265 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYAPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELSEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 I E + + R D D ++ T ++ + + Sbjct: 170 EIIGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G T+ V Sbjct: 229 KGSTKLVQEVDKAL 242 >gi|228951347|ref|ZP_04113456.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229177390|ref|ZP_04304773.1| Extracellular solute-binding protein family 3 [Bacillus cereus 172560W] gi|228606113|gb|EEK63551.1| Extracellular solute-binding protein family 3 [Bacillus cereus 172560W] gi|228808284|gb|EEM54794.1| Extracellular solute-binding protein family 3 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 265 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F V + + + + + + L IK+ G L G F + Sbjct: 1 MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYAPFTFHDS 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ ++ + P + L +K+ D+++ + Sbjct: 61 SNKLTGFDVELSEEVAKRLGVKP---VFKETQWDSLLAGLDAKRFDMVANEVGI--REDR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F ++ K ++ + + G Q+ T+ AD K + Sbjct: 116 QKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLK-GAQSLTS---NYADIAKKNG--A 169 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 I E + + R D D ++ T ++ + + Sbjct: 170 EIIGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKIKIVDTEKEASES-GFLFR 228 Query: 232 QGDTEWYNIVSWTH 245 +G T+ V Sbjct: 229 KGSTKLVQEVDKAL 242 >gi|229915827|ref|YP_002884473.1| extracellular solute-binding protein family 3 [Exiguobacterium sp. AT1b] gi|229467256|gb|ACQ69028.1| extracellular solute-binding protein family 3 [Exiguobacterium sp. AT1b] Length = 255 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 83/257 (32%), Gaps = 17/257 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD-WKG 58 M K L + + + S G+ ++ L G + + V ANGD G Sbjct: 1 MKKWLLAFTLMMSAVLLGACSQE--TEGEATEQKTLVMGTSADYFPYEFVDTANGDAIVG 58 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD++ ++ + + ++ ++ AL S ++D + T R+ F Sbjct: 59 FDIEIAETITERLGYE---LKIEDMDFGSLLGALNSGRVDFVMAGMTPTEERKE--NADF 113 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I + + + ++ LSG I VQ + E + + + Sbjct: 114 SDIYLSATNLIMTKDES-LQAIEDLSGKKIGVQTASIQENIAKEQAP----DAELVSLNK 168 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + EI R DA + + D+ + A + D E Sbjct: 169 IPEIVQELNTGRIDAMVIEDTVAQKY---LDQDDSFYTFALKEDGEKGSAAAFKLDDELR 225 Query: 239 NIVSWTHYAMVTAEELG 255 + + M+ + E+ Sbjct: 226 DQFNEELNKMMESGEID 242 >gi|70731863|ref|YP_261605.1| arginine/ornithine ABC transporter periplasmic arginine/ornithine-binding protein [Pseudomonas fluorescens Pf-5] gi|68346162|gb|AAY93768.1| arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein [Pseudomonas fluorescens Pf-5] Length = 258 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 85/265 (32%), Gaps = 23/265 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L +L +F+ LK GI FA +G GFD Sbjct: 1 MKKLVLLGALALSVLSLPTFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + K ++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCEEM---KVKCVWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTN 105 Query: 121 ITYFDGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M IS +++L G +I VQ G+ E + + Sbjct: 106 KYYNTPARLVMKAGTQISDGLAELKGKNIGVQRGSIHERFAREVLAPLG--AQIKPYGSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 EI A R D D + L L D + + A+ +GD Sbjct: 164 NEIYLDVAAGRLDGTVADATLLNDGFLKTDAGKGFAFVGPAFTDVKYFGDGVGIAVRKGD 223 Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259 + ++ A+ + Q Sbjct: 224 KADLDKINAAIAAIRENGKYKQIQD 248 >gi|24379272|ref|NP_721227.1| putative amino acid transporter, amino acid-binding protein [Streptococcus mutans UA159] gi|290580723|ref|YP_003485115.1| putative amino acid transporter amino acid-binding protein [Streptococcus mutans NN2025] gi|24377189|gb|AAN58533.1|AE014922_8 putative amino acid transporter, amino acid-binding protein [Streptococcus mutans UA159] gi|254997622|dbj|BAH88223.1| putative amino acid transporter amino acid-binding protein [Streptococcus mutans NN2025] Length = 271 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 37/253 (14%), Positives = 80/253 (31%), Gaps = 18/253 (7%) Query: 2 YKDF---FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55 +K +S + + L S S + ++ DIK++ L ++ F V Sbjct: 3 FKKLVLGLLSFVAVFTLVACSSSNSKNLQDDIKEKKKLVVAVSPDYAPFEFKALVNGKDT 62 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G D+D +A++ + ++ ++ +L++ + DI +T R + Sbjct: 63 VVGADIDLAKAIAKELGVK---LELSSMSFDNVLSSLKTGKADIAISGLSYTKER--AQA 117 Query: 116 LAFRPITYFDGQGFIMHKKK---GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Y ++ K S + + VQ GT E + K + + Sbjct: 118 YDFSEAYYKTENAILIKKSDLNKYTMISSFNNKTKVAVQKGTIEEGLAKNQLK----QSN 173 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E ++ + DA + N + A A+ + Sbjct: 174 ITSLTSMGEAVNELKSGQVDAIDLEKPVAEGYVSQNSDLVLAKVALKTGEGDAKAVALPK 233 Query: 233 GDTEWYNIVSWTH 245 + V+ Sbjct: 234 DSGQLVKTVNKVI 246 >gi|261253295|ref|ZP_05945868.1| amino acid ABC transporter amino acid-binding protein [Vibrio orientalis CIP 102891] gi|260936686|gb|EEX92675.1| amino acid ABC transporter amino acid-binding protein [Vibrio orientalis CIP 102891] Length = 256 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 77/224 (34%), Gaps = 14/224 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 + K ++ GI F+ +A+G KGFDVD AL + K + +P + Sbjct: 18 VAQAKDWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCEEM---QVKCKIVPQDWD 74 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 +L +++ D + T R+ + F FI K G+ L G Sbjct: 75 GIIPSLLARKYDAIIAAMSITEERKK--KIDFTGKYALIPNKFIAKKGAGL-DFDNLDGQ 131 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 I VQ TT + L D + K + + +E R A GD SAL L Sbjct: 132 KIAVQRATTHDKYLTDNY---GDKVSIVRYGSFDEAYLDLANGRVAAVLGDASALEEGVL 188 Query: 207 TNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 + + ++ A+ + D + + Sbjct: 189 NKAGGEAYEFVGPSLTDPKWFGEGFGIAVRKQDKDLTKKLDAAI 232 >gi|260363802|ref|ZP_05776557.1| histidine ABC transporter, periplasmic histidine-binding protein [Vibrio parahaemolyticus K5030] gi|260876938|ref|ZP_05889293.1| histidine ABC transporter, periplasmic histidine-binding protein [Vibrio parahaemolyticus AN-5034] gi|260897920|ref|ZP_05906416.1| histidine ABC transporter, periplasmic histidine-binding protein [Vibrio parahaemolyticus Peru-466] gi|308085463|gb|EFO35158.1| histidine ABC transporter, periplasmic histidine-binding protein [Vibrio parahaemolyticus Peru-466] gi|308093844|gb|EFO43539.1| histidine ABC transporter, periplasmic histidine-binding protein [Vibrio parahaemolyticus AN-5034] gi|308113879|gb|EFO51419.1| histidine ABC transporter, periplasmic histidine-binding protein [Vibrio parahaemolyticus K5030] Length = 256 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 77/226 (34%), Gaps = 14/226 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + K+ ++ GI F+ + +G KGFDVD AL + K Q + + Sbjct: 16 SGVAQAKEWKTVRFGIEGAYPPFSWTETDGSLKGFDVDMANALCEEM---QVKCQIVAQD 72 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +L +++ D + T R+ + F FI K + + L Sbjct: 73 WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGANL-DFANLD 129 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G I VQ TT + L D + K + + +E R A GD SAL Sbjct: 130 GQKIAVQRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEG 186 Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 L + + ++ A+ + D + + Sbjct: 187 VLNKAGGDAYEFVGPSLTDAKWFGEGFGIAVRKQDKDLTKKLDAAI 232 >gi|238024846|ref|YP_002909078.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain-containing protein [Burkholderia glumae BGR1] gi|237879511|gb|ACR31843.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Burkholderia glumae BGR1] Length = 269 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 80/228 (35%), Gaps = 11/228 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + +A L I K G L+ + F V A+ +G+D+D L+ A+ +K Sbjct: 28 GVSAAHADALDSITKSGVLRVAVPEDYPPFGSVGADMQPQGYDIDTAGLLAKALG---AK 84 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +Q +P+N+ R L + ++D++ + T RE + F QG + Sbjct: 85 LQLVPVNSANRIPYLTTNKVDLVISSLGKTPEREKV--IDFSAAYGPYFQGVFGPADLKV 142 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S + L+G ++ G E+ L+ FE A+ + + Sbjct: 143 SGPADLTGKTVGATRGALEEIALSQMAP----NATIKRFEDNNATIQAFLSGQVQLIAAG 198 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A+ P +I SP + + + V+ Sbjct: 199 NIVAAAILA--KNPPRRPETKFVIKNSPCFVGLNKNEPRLLAKVNAAI 244 >gi|225571602|ref|ZP_03780598.1| hypothetical protein CLOHYLEM_07700 [Clostridium hylemonae DSM 15053] gi|225159679|gb|EEG72298.1| hypothetical protein CLOHYLEM_07700 [Clostridium hylemonae DSM 15053] Length = 261 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 83/251 (33%), Gaps = 19/251 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDI-----KKRGFLKCGINTGLVGFAEVKANGD 55 M VS+L + + + + K + L N + + D Sbjct: 3 MKLKKLVSVLLVGACVVSLAACGSDKKEKSDDGDKKSKDTLVMATNAEFPPYEFRDGD-D 61 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G D + +A++ + +++ + A+ S + D + T R+ Sbjct: 62 VVGIDAEVAQAIADKLG---MELKIEDMAFDSIIPAVTSGKADFGAAGLTVTDERKE--N 116 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F Q ++ + ++ L+G I VQ GTT ++ D A Sbjct: 117 VDFTDTYAKATQVIMVKEDSKVAGPDDLTGKKIGVQLGTTGDIYAGDIEDA-----EVER 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + E A + + DA D K + IL + ++ A A+ +G+ Sbjct: 172 YNKGFEAVQALQQGKIDAVVID---GEPAKEFVKQAEGIKILDEAFTEEEYALAVDKGNE 228 Query: 236 EWYNIVSWTHY 246 + ++ Sbjct: 229 DLLGKINDALN 239 >gi|153837350|ref|ZP_01990017.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus AQ3810] gi|260903455|ref|ZP_05911850.1| histidine ABC transporter, periplasmic histidine-binding protein [Vibrio parahaemolyticus AQ4037] gi|149749381|gb|EDM60154.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus AQ3810] gi|308110371|gb|EFO47911.1| histidine ABC transporter, periplasmic histidine-binding protein [Vibrio parahaemolyticus AQ4037] Length = 256 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 77/226 (34%), Gaps = 14/226 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + K+ ++ GI F+ + +G KGFDVD AL + K Q + + Sbjct: 16 SGVAQAKEWKTVRFGIEGAYPPFSWTETDGSLKGFDVDMANALCEEM---QVKCQIVAQD 72 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +L +++ D + T R+ + F FI K + + L Sbjct: 73 WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGANL-DFANLD 129 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G I VQ TT + L D + K + + +E R A GD SAL Sbjct: 130 GQKIAVQRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEG 186 Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 L + + ++ A+ + D + + Sbjct: 187 VLNKAGGDAYEFVGPSLTDAKWFGEGFGIAVRKQDKDLTKKLDAAI 232 >gi|126737005|ref|ZP_01752740.1| probable amino acid ABC transporter, substrate-binding protein [Roseobacter sp. SK209-2-6] gi|126721590|gb|EBA18293.1| probable amino acid ABC transporter, substrate-binding protein [Roseobacter sp. SK209-2-6] Length = 280 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 80/257 (31%), Gaps = 21/257 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + + + F+ + A L I G L G N+ + + N + GFD Sbjct: 7 RRTAIKGLAAALSVSFSGLAAQAGETLDRILSDGVLTVGTNSDYRPNSFMNDNNELDGFD 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + + +++ + D ++++ + + + D++ + T R L F Sbjct: 67 IAVSKEVAARLGVD---VKFVTPGWEVMTAGRWAGRWDMVVGSMTPTKARAEV--LDFPA 121 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK-------AHNMKYHP 173 I YF F +HK L G + V + +T L K A P Sbjct: 122 IYYFSPAAFAVHKTSSAEKPGDLDGKIVGVVSASTYNRYLEHDLKLDVVGMPAFTYDVTP 181 Query: 174 IVFERVEEI--DAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 ++ R A + + L + + PLA Sbjct: 182 GEIRAYSDVNEFDDLALGDGARLHAVLQSVPVIGEAVAV---GLPIKQLGEPVFFEPLAL 238 Query: 229 AIIQGDTEWYNIVSWTH 245 A +GD E + Sbjct: 239 ATDKGDAELNARLHNII 255 >gi|317122404|ref|YP_004102407.1| extracellular solute-binding protein family 3 [Thermaerobacter marianensis DSM 12885] gi|315592384|gb|ADU51680.1| extracellular solute-binding protein family 3 [Thermaerobacter marianensis DSM 12885] Length = 296 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 78/224 (34%), Gaps = 15/224 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S+L +IK+RG++ + G+ GFD+D +A++ + + + Sbjct: 65 SLLDEIKERGYMTFATDGAYPPMEFPDPENPGELIGFDIDLGKAIAEKLGVEY---RVEV 121 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVS 141 + L++++ D + + T R+ F + +GI S+ Sbjct: 122 AEWEGLLAGLEARRFDAVMSAMNITEERQK--SADFVQYFEMGQMIVVPKGNPQGIQSLD 179 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G I VQ GTT E A ++ + A R DA D Sbjct: 180 DLKGKVIAVQIGTTNEEIARGIEGA-----TVKTYQTFPDALQEVAAGRADATILDEPVA 234 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 E+V +P +P+ A+ +G+ E V Sbjct: 235 RYYANIEGDKYEYVGVP--FETAPVGIALPKGEDELVQAVQQAL 276 >gi|161502500|ref|YP_001569612.1| hypothetical protein SARI_00544 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863847|gb|ABX20470.1| hypothetical protein SARI_00544 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 260 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 91/279 (32%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + + + ++ G +T F+ A GD+ GFD Sbjct: 1 MKKTVLALSLLIGLGATAASYAALPQ--------TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDVGNEMCQRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I ++ L G + V G+T E D ++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKG--VNVVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + A R DA D A L E+ + + + D Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE A A ++++K + +V Sbjct: 226 TELKA-------AFDKALAELREDGTYDKMAKKYFDFNV 257 >gi|55823258|ref|YP_141699.1| ABC transporter substrate binding protein [Streptococcus thermophilus CNRZ1066] gi|55739243|gb|AAV62884.1| ABC transporter substrate binding protein [Streptococcus thermophilus CNRZ1066] Length = 270 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 92/245 (37%), Gaps = 20/245 (8%) Query: 1 MYKDFFVSILCLIILFFTS-----FSTNASILGDIKKR----GFLKCGINTGLVGFAEVK 51 M K +I+ +I + + ++ + + K L+ + Sbjct: 1 MKKKSIFAIVGIIFIAVIAYFGYQTASGSKTTQTVSKSSSNEKVLRVATTGVSFPGSYKD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +NGD GFDV+ RA+ I ++++ + F LQS ++D ++ + T R+ Sbjct: 61 SNGDLTGFDVEIARAVGKKIGYK---VEFITTSFDGLFGLLQSGKVDAVASSIAITDERQ 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K +++++++ G ++ G+ + A++ Sbjct: 118 K--SYDFTTPYATFQYGVVVKKDSSLTNINEIGGHTLAATVGSNQIKVVN----AYDPSI 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 F+ E + D Y+ + L A+ + + IL + + +A A Sbjct: 172 QIQTFDDREAALTGVTNGQVDGYSNSKTILSAIIKQ--KNLDLKILDGELGQENIAIAFN 229 Query: 232 QGDTE 236 +G + Sbjct: 230 KGKNK 234 >gi|331003247|ref|ZP_08326754.1| hypothetical protein HMPREF0491_01616 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412900|gb|EGG92280.1| hypothetical protein HMPREF0491_01616 [Lachnospiraceae oral taxon 107 str. F0167] Length = 263 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 86/257 (33%), Gaps = 26/257 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG------------DIKKRGFLKCGINTGLVGFA 48 M K ++ +++ + + + G L N + Sbjct: 1 MKKKILALLITGLMVASLAACGGSKRADTKPGSENADGSVKTIQSGKLVVATNAEFPPYE 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + + G D++ A++ + +++ + L + S + D T Sbjct: 61 YHEGD-KIVGIDMEIADAIAKKMG---LELEIEDIAFDSVILEVTSGKADAGVAGISATE 116 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R+ + F Q I+ + ++S + L G ++ VQ GTT +L +D A Sbjct: 117 ERK--QSVDFSDTYTTSKQLIIVKEDSKVASGADLEGKTVGVQTGTTGDLLASDIKDA-- 172 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + + + A + DA D K + S IL + ++ A Sbjct: 173 ---TVERYAKGMDAVQALSQGKIDAVVID---SEVAKKFVEETSGLKILDEAYAEEQYAI 226 Query: 229 AIIQGDTEWYNIVSWTH 245 AI +G+ E + V+ Sbjct: 227 AIKKGNKELLDGVNKAL 243 >gi|37528305|ref|NP_931650.1| hypothetical protein plu4484 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787743|emb|CAE16856.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 257 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 70/250 (28%), Gaps = 14/250 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K +L I F +S NA L IK G L+ F A+G GFDV Sbjct: 2 KTLITLLLANTIQFGLVYSANAEPTLDKIKSTGTLRIATEGAYPPFTYRDASGTLTGFDV 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D R ++ + P ++ L + + D + T R+ F Sbjct: 62 DIGREIAHRLHVKP---TFIEGKWDGLIAGLDAGRSDAVINQIAITPERKK--KYDFSIP 116 Query: 122 TYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I I S L G + T A + + I Sbjct: 117 YITSQAVLIINKNNNNIRKFSDLKGKTSA----HTLTNNFAQIARDNG--AEIIGTNGFS 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + R DA D + K ++ + A + +G+ E Sbjct: 171 QEIELVSTGRADATINDSLSYLDYKKHKPNAPVKIVAATPNAGQ-TAVLLRKGEPELKVA 229 Query: 241 VSWTHYAMVT 250 + + T Sbjct: 230 IDQAITDIKT 239 >gi|292487346|ref|YP_003530218.1| putative ABC transporter periplasmic protein [Erwinia amylovora CFBP1430] gi|292898591|ref|YP_003537960.1| ABC transporter substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291198439|emb|CBJ45547.1| ABC transporter, substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291552765|emb|CBA19810.1| putative ABC transport system, periplasmic component [Erwinia amylovora CFBP1430] gi|312171452|emb|CBX79710.1| putative ABC transport system, periplasmic component [Erwinia amylovora ATCC BAA-2158] Length = 261 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 53/289 (18%), Positives = 103/289 (35%), Gaps = 30/289 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L +LF A L D++KRG L+ + F V + +G+D Sbjct: 1 MKKG-LSTLLAAALLFSQISVVQADQLQDVEKRGVLRVAVPQDFPPFGSVGTDLQPQGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ + K+Q +P+ + R LQ+ ++D++ + RE + F Sbjct: 60 IDMATYLAKQM---KLKLQLVPVTSANRVPYLQTGKVDLVISSLGKNPEREKV--IDFSR 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G K + + LSG S+ V G ++ L +E Sbjct: 115 AYAPFFLGVFGAKPGALKDAAGLSGKSVGVTRGAVEDMVLTSVAPK---DAQVKRYEDNN 171 Query: 181 EIDAAYRAHRCDAYTGDISALY--ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +AY + + + A + + P +L D P + +G+ Sbjct: 172 TTLSAYLSGQVQYVATGNLVVAAIARQQADKAPVAQFMLKDS----PCFIGMKKGEPALK 227 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGE 287 V E + K +N++++ R+L +++G Sbjct: 228 AKVDALI-------EQALKDKTLNRLAE--------RWLKAPLPADLGA 261 >gi|167759819|ref|ZP_02431946.1| hypothetical protein CLOSCI_02182 [Clostridium scindens ATCC 35704] gi|167662438|gb|EDS06568.1| hypothetical protein CLOSCI_02182 [Clostridium scindens ATCC 35704] Length = 260 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 39/258 (15%), Positives = 82/258 (31%), Gaps = 18/258 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILG----DIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K V ++ + + + + L N + + + D Sbjct: 4 KKLVSVLLVAACVFSLAACGSKDDSKDSGDSKKDSKDTLVMATNAEFPPYEFHEGD-DVV 62 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D D RA+ + +++ + A+ S + D + T R+ + Sbjct: 63 GIDADIARAIGEEMG---MEVKIEDMAFDSIIPAVTSGKADFGAAGMTVTEDRKK--NVD 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Q I+ + I+ L+G I VQ GTT ++ D A + Sbjct: 118 FTDTYATATQVIIVKEGSDIAGPDDLTGKKIGVQLGTTGDIYADDIEDA-----EVERYN 172 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + E A + DA D K IL + ++ A A+ + + + Sbjct: 173 KGFEAVQALTQDKIDAVVID---GEPAKEFVAEADGLKILDEAFTEEEYAIAVAKDNDDL 229 Query: 238 YNIVSWTHYAMVTAEELG 255 ++ ++ + ++ Sbjct: 230 LKKMNEALASLKESGKID 247 >gi|322831959|ref|YP_004211986.1| cationic amino acid ABC transporter periplasmic binding protein [Rahnella sp. Y9602] gi|321167160|gb|ADW72859.1| cationic amino acid ABC transporter, periplasmic binding protein [Rahnella sp. Y9602] Length = 260 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 89/254 (35%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F V L L+++ ++ S A++ I G + F ++G GFD Sbjct: 1 MKKLFKV--LPLVLVLASAGSAFAAVPKAI------NIGTDPTYAPFESKDSSGKLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + K Y+ + +L++K+ID + + T R + F Sbjct: 53 IDLANEMCKRA---AIKCTYVESDFDALIPSLKAKKIDAIISSLSITEKR--QQEIDFTE 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K + L G ++ V G+T E ++ + + + ++ Sbjct: 108 KLYAANARLIAPKGSKVLPTLDALKGKNVGVLQGSTQEAYANAMWQPKGI--NVVAYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I A + R DA D A L ++ + + + D Sbjct: 166 DLIYADLASGRLDAAFQDEVAGSEGFLKQAAGKDYAFAGPSVKDDKFFGVGTGMGLRKTD 225 Query: 235 TEWYNIVSWTHYAM 248 T+ + ++ +M Sbjct: 226 TDLKDALNKAFDSM 239 >gi|227872731|ref|ZP_03991056.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Oribacterium sinus F0268] gi|227841426|gb|EEJ51731.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Oribacterium sinus F0268] Length = 286 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 84/270 (31%), Gaps = 37/270 (13%) Query: 1 MYKDFFVSILCLIILFF----------TSFSTNASILGDIKKRG--------------FL 36 M K ++ L + L T+ + A + RG L Sbjct: 11 MKKYLLIAALAGLSLVACGGSKGSTEGTAKGSEAGTEQGNQARGSKETDSAKAEAKGGTL 70 Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 N + + D G DVD A++ + K++ + A+QS + Sbjct: 71 IMATNAEFPPYEYHEGK-DIVGIDVDIAEAIAEEMG---MKLEISDIAFDAIIPAVQSGK 126 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 D + + + F Q I+ + IS + L G + VQ GTT Sbjct: 127 ADFGAAGMTVNE--DRLKNVDFSDSYATSVQSVIVTEDSSISKIDDLKGKKVGVQQGTTG 184 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 +L D F + + A +A + DA D + N + Sbjct: 185 DLYSTDDLGEK----SVERFPKGADAVQALQAGKVDAVIIDKNPAEVFVSQNKG---LKL 237 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 L ++ A + +G+TE ++ Sbjct: 238 LDSAYAEEDYAICVKKGNTELVEKINAALK 267 >gi|296272604|ref|YP_003655235.1| family 3 extracellular solute-binding protein [Arcobacter nitrofigilis DSM 7299] gi|296096778|gb|ADG92728.1| extracellular solute-binding protein family 3 [Arcobacter nitrofigilis DSM 7299] Length = 260 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 92/255 (36%), Gaps = 10/255 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+K+ + +L + L S NA+ L DIKK G +K + F V + +G+D Sbjct: 1 MFKNVLLKVLAIGALLSVSLL-NANQLADIKKSGVIKIAVPQDFAPFGSVSKDMSIQGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + I + + R LQ+ ++++ + R + F Sbjct: 60 VDTAKLIAKKLGVKLELIP---VASANRIPYLQTGKVNLTISSLGKNPERAR--AIDFSD 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G K +SS + L G ++ V GT ++ L+ + +E Sbjct: 115 AYAIFYLGVFGSKDVKVSSPADLKGKTVGVTRGTIEDIELSKLV---DPSVTIKRYEDNN 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +++ + + + + N E + +I +P I + + E Sbjct: 172 MTTSSFLSGQVKLIATGNVIVSEMARKNPGKEEAMT-KFMIVNNPCYIGIKKHEPELMAF 230 Query: 241 VSWTHYAMVTAEELG 255 ++ +L Sbjct: 231 INKFIKENKENGKLN 245 >gi|296159865|ref|ZP_06842686.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295889848|gb|EFG69645.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 274 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 80/249 (32%), Gaps = 17/249 (6%) Query: 3 KDFFVSILC------LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 + F ++ L L + +A L I K G ++ G+ F + + Sbjct: 12 RRVFATLAATLAFTGLGALCALPSAAHADALDTIAKSGTVRIGVFEDYPPFGSIGPDMKP 71 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G+D+D + A+ +K++ + + R L + D+L T RE + Sbjct: 72 MGYDIDVANLIGRAL---NAKVELVQVTGDNRMAYLADHKADMLLS-VGQTPEREKV--I 125 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F K + + + L+G SI V GT +L++ + F Sbjct: 126 DFSQPYAPYYLAVFGPKALPVKNAADLAGKSISVARGTLEDLSVTKIAP---PTANIKRF 182 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +A+ + + + P+ + SP + + + Sbjct: 183 DDPNGAISAFLSGQVQLMVVGNDVGATILAR--HPANDPEQKFSLFSSPDHVGLNKNEPR 240 Query: 237 WYNIVSWTH 245 V T Sbjct: 241 LKQKVDETI 249 >gi|188534334|ref|YP_001908131.1| glutamine ABC transporter periplasmic protein [Erwinia tasmaniensis Et1/99] gi|188029376|emb|CAO97253.1| Glutamine high-affinity transporter [Erwinia tasmaniensis Et1/99] Length = 248 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 85/247 (34%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F VSI L + F S + L +T V F + +G + GFD Sbjct: 1 MKSIFKVSIAALTLAFSLSSTAAE---------KKLVVATDTAFVPFEFKQ-DGKYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + + P++ ALQ++ ID+ T R+ +AF Sbjct: 51 VDLWDAIAKQLNMEY---TLKPMDFSGIIPALQTRNIDLALAGITITDERKK--AIAFSD 105 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ + + L+G + V++GT + + K F + Sbjct: 106 GYYKSGLLVMVKANNDSVKGIDDLNGKVVAVKSGTGSVDYAKQHIKYK----DLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + +R DA D + T + + + D I A +G + Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFINTAGKG-QFKAVGDSIEAQQYGIAFPKGSDDLRE 220 Query: 240 IVSWTHY 246 V+ Sbjct: 221 KVNGALK 227 >gi|91211606|ref|YP_541592.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli UTI89] gi|117624500|ref|YP_853413.1| lysine/arginine/ornithine transporter subunit [Escherichia coli APEC O1] gi|218559223|ref|YP_002392136.1| lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|237704787|ref|ZP_04535268.1| lysine/arginine/ornithine transporter subunit [Escherichia sp. 3_2_53FAA] gi|91073180|gb|ABE08061.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Escherichia coli UTI89] gi|115513624|gb|ABJ01699.1| lysine/arginine/ornithine transporter subunit [Escherichia coli APEC O1] gi|218365992|emb|CAR03736.1| lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|226901153|gb|EEH87412.1| lysine/arginine/ornithine transporter subunit [Escherichia sp. 3_2_53FAA] gi|294489449|gb|ADE88205.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli IHE3034] gi|307626153|gb|ADN70457.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli UM146] gi|315285928|gb|EFU45366.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 110-3] gi|323952103|gb|EGB47977.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H252] gi|323956076|gb|EGB51829.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H263] Length = 260 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ ++ +++ + L + ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDTIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E + +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L + + + + D Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGPSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKALN------ELRQDGT-YDKMAKKYFDFNV 257 >gi|72161213|ref|YP_288870.1| extracellular solute-binding protein [Thermobifida fusca YX] gi|71914945|gb|AAZ54847.1| extracellular solute-binding protein, family 3 [Thermobifida fusca YX] Length = 285 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 67/215 (31%), Gaps = 8/215 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G+ G ++ N GFDVD ++ + P +I++ + R LQ Sbjct: 42 TITIGVKYDQPGLGLLEGN-KPVGFDVDVATYIAGELGYSPDQIEWTEAASANRETFLQQ 100 Query: 95 KQIDILSRNTDWTLLREISLGLAFR-PITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 +D++ T R+ + F P + I L G +C +G Sbjct: 101 GTVDMIVATYSITDERK--NVVDFAGPYYIAQQDIIVSADNTDIQGPEDLEGKVLCSASG 158 Query: 154 TTTELTLAD--YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 + + + D + E DA T D + L P Sbjct: 159 SRSANNIVDSEENGGLGIGAELREAGNYSECMELLANGTVDAVTTDNTILAGFAAQ--NP 216 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + ++ + + + +G TE V+ Sbjct: 217 DAYRMVNNPFGEEKYGVGLPKGSTEMCEKVNEAIT 251 >gi|328473251|gb|EGF44099.1| amino acid ABC transporter periplasmic amino acid-binding protein [Vibrio parahaemolyticus 10329] Length = 258 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 77/226 (34%), Gaps = 14/226 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + K+ ++ GI F+ + +G KGFDVD AL + K Q + + Sbjct: 18 SGVAQAKEWKTVRFGIEGAYPPFSWTETDGSLKGFDVDMANALCEEM---QVKCQIVAQD 74 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +L +++ D + T R+ + F FI K + + L Sbjct: 75 WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGANL-DFANLD 131 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G I VQ TT + L D + K + + +E R A GD SAL Sbjct: 132 GQKIAVQRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEG 188 Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 L + + ++ A+ + D + + Sbjct: 189 VLNKAGGDAYEFVGPSLTDAKWFGEGFGIAVRKQDKDLTKKLDAAI 234 >gi|318081102|ref|ZP_07988434.1| sugar-binding protein [Streptomyces sp. SA3_actF] Length = 346 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 71/225 (31%), Gaps = 17/225 (7%) Query: 33 RGFLKCGINTGLVGFAEV----KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 RG L G++ + N D +GFD+D A++ + DP + + R Sbjct: 91 RGKLVVGVDQNSYRWGFRNPQRDGNNDIEGFDIDLAHAIAKDLLGDPDALVLRAIPTNRR 150 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGAS 147 A+ +D++ R T R ++F + Q I+ + + + L+G Sbjct: 151 VQAVADHDVDMVVRTMTITCRR--LKDVSFSTPYFRTTQRIIVPRGSSVDGFNASLTGKR 208 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C +T E L + FK K + + + DA D + Sbjct: 209 LCSADSSTAENVLTEGFK---DKVELVSVPNQLDCLVRLQLGEVDALVTDGALGEGQLAQ 265 Query: 208 NDRPSEHVILPDIISK-------SPLAPAIIQGDTEWYNIVSWTH 245 + + A+ Q + V+ Sbjct: 266 DPSLDMQGGPDENNPADRDSPAWEYYGIAMNQDSPQLVARVNKIL 310 >gi|28897773|ref|NP_797378.1| amino acid ABC transporter periplasmic amino acid-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|28805986|dbj|BAC59262.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus RIMD 2210633] Length = 258 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 77/226 (34%), Gaps = 14/226 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + K+ ++ GI F+ + +G KGFDVD AL + K Q + + Sbjct: 18 SGVAQAKEWKTVRFGIEGAYPPFSWTETDGSLKGFDVDMANALCEEM---QVKCQIVAQD 74 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +L +++ D + T R+ + F FI K + + L Sbjct: 75 WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGANL-DFANLD 131 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G I VQ TT + L D + K + + +E R A GD SAL Sbjct: 132 GQKIAVQRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEG 188 Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 L + + ++ A+ + D + + Sbjct: 189 VLNKAGGDAYEFVGPSLTDAKWFGEGFGIAVRKQDKDLTKKLDAAI 234 >gi|237786244|ref|YP_002906949.1| putative extracellular solute-binding protein [Corynebacterium kroppenstedtii DSM 44385] gi|237759156|gb|ACR18406.1| putative extracellular solute-binding protein [Corynebacterium kroppenstedtii DSM 44385] Length = 370 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 47/208 (22%), Positives = 78/208 (37%), Gaps = 10/208 (4%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 DI +RG + G+++ L + G+ +GFDV R ++ IF DP +I + L++ E Sbjct: 119 DIVRRGRIIVGVSSSLNFLGFQDPSSGNLEGFDVSLAREIARDIFGDPERIDFRFLSSAE 178 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R ALQ +DI+ R RE +AF + I S L A+ Sbjct: 179 RVDALQHGNVDIVVRTMTI--DRERRAKVAFSAPYLHAQARILASTSSSIQSADDLRDAT 236 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +CV +T + ++ + A + H+ A D S L L Sbjct: 237 VCVPKDSTFQHNAQVIAP----HSRFLITNDWSDCLVAMQQHQVQAIISDDSILSGLAAQ 292 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDT 235 + ++ S A I + Sbjct: 293 DSN---THLVGQPYGSSDYAVGIAKTTP 317 >gi|15965623|ref|NP_385976.1| putative amino-acid binding periplasmic protein [Sinorhizobium meliloti 1021] gi|307314027|ref|ZP_07593640.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] gi|307321204|ref|ZP_07600606.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] gi|15074804|emb|CAC46449.1| Putative amino-acid binding periplasmic protein [Sinorhizobium meliloti 1021] gi|306893106|gb|EFN23890.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] gi|306899149|gb|EFN29788.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] Length = 260 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 84/252 (33%), Gaps = 23/252 (9%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + + + + + + G F ++++G GFD+D Sbjct: 5 RRLAATASAAVFVLMAGVAMAEGE--------KVVIGTEGAYPPFNNLESDGTLTGFDID 56 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +AL + ++ ++ + AL +K+ D + + T R+ + F Sbjct: 57 IAKALCEEM---KAECTFVTQDWDGIIPALIAKKFDAIVASMSITEERK--QQVDFTNKY 111 Query: 123 YFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y ++ K I+ + + LSG ++ Q TT + K ++ + Sbjct: 112 YNTPPAIVVPKDSPITEATAAALSGKALGAQGSTTHSNYAEAHMKE----SEVKLYPTAD 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH----VILPDIISKSPLAPAIIQGDTE 236 E R DA D+ L T D + + +I+ AI +GD Sbjct: 168 EYKLDLANGRIDAAIDDVVVLSEWLKTEDGACCKLLGTLPIDPVINGEGAGIAIRKGDDA 227 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 228 LREKLNKAIEAI 239 >gi|84393751|ref|ZP_00992499.1| ABC-type amino acid transport, signal transduction system, periplasmic component/domain [Vibrio splendidus 12B01] gi|84375613|gb|EAP92512.1| ABC-type amino acid transport, signal transduction system, periplasmic component/domain [Vibrio splendidus 12B01] Length = 256 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 80/224 (35%), Gaps = 14/224 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 + K+ ++ GI F+ +A+G KGFDVD AL + + + + + + Sbjct: 18 VAQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCTEM---QVQCKIVAQDWD 74 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 +L +++ D + T R+ + F FI K G+ + LSG Sbjct: 75 GIIPSLLARKYDAIIAAMSITEERKK--KIDFTGKYALIPNKFIAKKGAGL-NFDDLSGQ 131 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 I VQ TT + L D + + + +E R A GD SAL L Sbjct: 132 KIAVQRATTHDKYLTDNY---GDTVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEGVL 188 Query: 207 TNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 ++ + ++ A+ + D + + Sbjct: 189 NKAGGEDYEFVGPSLTDPKWFGDGFGIALRKQDKDLTKQLDAAI 232 >gi|255527867|ref|ZP_05394714.1| extracellular solute-binding protein family 3 [Clostridium carboxidivorans P7] gi|255508449|gb|EET84842.1| extracellular solute-binding protein family 3 [Clostridium carboxidivorans P7] Length = 178 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 71/183 (38%), Gaps = 12/183 (6%) Query: 1 MYKDFFVSILCLIILFFTSFS------TNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K ++ + L + +I+++G G++ G Sbjct: 1 MKKKLVFLVIAIFTLGLLISGCGKKEQATDNSWKEIQQKGKFVLGLDDSFPPMGFKDDKG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+D + + + ++ P+ L+L +K ID++ T R Sbjct: 61 QIIGFDIDMAQEAAKRMGVK---VELKPVQWDGVLLSLNNKDIDVIWNGLTITDKR--KQ 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL-ADYFKAHNMKYHP 173 +AF + + Q + + I + L+G + +Q G+++E L AD A ++K + Sbjct: 116 QIAFSKVYLQNKQIIVTNNDSNIKTKKDLAGKKVGLQLGSSSETALNADSATAKSIKENK 175 Query: 174 IVF 176 +F Sbjct: 176 KIF 178 >gi|318060368|ref|ZP_07979091.1| sugar-binding protein [Streptomyces sp. SA3_actG] Length = 375 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 71/225 (31%), Gaps = 17/225 (7%) Query: 33 RGFLKCGINTGLVGFAEV----KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 RG L G++ + N D +GFD+D A++ + DP + + R Sbjct: 120 RGKLVVGVDQNSYRWGFRNPQRDGNNDIEGFDIDLAHAIAKDLLGDPDALVLRAIPTNRR 179 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGAS 147 A+ +D++ R T R ++F + Q I+ + + + L+G Sbjct: 180 VQAVADHDVDMVVRTMTITCRR--LKDVSFSTPYFRTTQRIIVPRGSSVDGFNASLTGKR 237 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C +T E L + FK K + + + DA D + Sbjct: 238 LCSADSSTAENVLTEGFK---DKVELVSVPNQLDCLVRLQLGEVDALVTDGALGEGQLAQ 294 Query: 208 NDRPSEHVILPDIISK-------SPLAPAIIQGDTEWYNIVSWTH 245 + + A+ Q + V+ Sbjct: 295 DPSLDMQGGPDENNPADRDSPAWEYYGIAMNQDSPQLVARVNKIL 339 >gi|215487523|ref|YP_002329954.1| lysine/arginine/ornithine transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|218700786|ref|YP_002408415.1| lysine/arginine/ornithine ABC transporter subunit periplasmic-binding protein [Escherichia coli IAI39] gi|300936888|ref|ZP_07151775.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 21-1] gi|312967610|ref|ZP_07781825.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli 2362-75] gi|331658393|ref|ZP_08359355.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Escherichia coli TA206] gi|331673813|ref|ZP_08374576.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Escherichia coli TA280] gi|215265595|emb|CAS09998.1| lysine/arginine/ornithine transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|218370772|emb|CAR18585.1| lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI39] gi|222034066|emb|CAP76807.1| Lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli LF82] gi|300457999|gb|EFK21492.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 21-1] gi|312287807|gb|EFR15712.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli 2362-75] gi|312946929|gb|ADR27756.1| lysine/arginine/ornithine transporter subunit; periplasmic-binding component of ABC superfamily protein [Escherichia coli O83:H1 str. NRG 857C] gi|315298157|gb|EFU57421.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 16-3] gi|320196178|gb|EFW70802.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Escherichia coli WV_060327] gi|323187965|gb|EFZ73260.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli RN587/1] gi|331056641|gb|EGI28650.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Escherichia coli TA206] gi|331069086|gb|EGI40478.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Escherichia coli TA280] Length = 260 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ ++ +++ + L + ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E + +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L + + + + D Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGPSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKALN------ELRQDGT-YDKMAKKYFDFNV 257 >gi|167750530|ref|ZP_02422657.1| hypothetical protein EUBSIR_01506 [Eubacterium siraeum DSM 15702] gi|167656456|gb|EDS00586.1| hypothetical protein EUBSIR_01506 [Eubacterium siraeum DSM 15702] Length = 294 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 58/304 (19%), Positives = 111/304 (36%), Gaps = 35/304 (11%) Query: 1 MYKDFFVSILCLIIL------FFTSFSTNAS--------------ILGDIKKRGFLKCGI 40 M K F ++ L + FT+ TNA+ L +IK G + G+ Sbjct: 1 MKKLNFKKLIALGLTAAAAVASFTACGTNATSGGSDGNTGSKVYRTLDEIKASGKINIGV 60 Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 + F V NG+++G+D+ F L + + I Y+ A R L++ ++DI+ Sbjct: 61 FSDKNPFGYVDENGEYQGYDIYFANRLGKDLGVE---INYVSTEAANRVEYLETGKVDII 117 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELT 159 N T R + F G + I+S+ + + + V +GTT EL Sbjct: 118 LANFTVTEERAE--KVDFALPYMNVALGVVSPDSNVITSLDNWKAEDRMIVISGTTAELY 175 Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 L + ++ +A A+ D + + A V + Sbjct: 176 LT----KNYPDIKLQKYDSYATAKSAIENGNGVAWANDNTEVIAFAKQ--NKGYTVGIDS 229 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279 + S+ +APA+ +G+ N ++ + + + + DT D + L + Sbjct: 230 LGSQDTIAPAVSKGNETLLNWINDEIKTL---GKENFFHADYDATLTDTYGADYKETLVV 286 Query: 280 DKSS 283 + Sbjct: 287 EGGE 290 >gi|146318206|ref|YP_001197918.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus suis 05ZYH33] gi|146320400|ref|YP_001200111.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus suis 98HAH33] gi|145689012|gb|ABP89518.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus suis 05ZYH33] gi|145691206|gb|ABP91711.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus suis 98HAH33] gi|292558007|gb|ADE31008.1| ABC transporter substrate-binding protein [Streptococcus suis GZ1] gi|319757674|gb|ADV69616.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus suis JS14] Length = 280 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 76/251 (30%), Gaps = 13/251 (5%) Query: 2 YKDFFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K ++ + L + +T + + + G + V + +G + Sbjct: 6 KKMMLGALALVTSLTLAACGSNDSATKSDNWTAYESEKSVTIGFDKTFVPMGFEQTDGSY 65 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D A+ +++ P++ + L + ID++ T R+ + Sbjct: 66 TGFDIDLANAVFEKYG---ITVKWQPIDWDLKETELNNGNIDLIWNGYSITDERKE--KV 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHP 173 F + Q + K IS VS + + QAG++ K Sbjct: 121 LFTNPYMDNQQVLVTKKSSNISQVSDMKDKILGAQAGSSGYSVFESQPAILKDIVQNNDA 180 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + E + R D D +++ I+ A + Sbjct: 181 SQYATFNEALIDLKNDRIDGLLIDRVYANYYLQQEGIIADYNIIDAGFENEAFAVGARKS 240 Query: 234 DTEWYNIVSWT 244 DT ++ Sbjct: 241 DTTLVENINKA 251 >gi|293607249|ref|ZP_06689590.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292814341|gb|EFF73481.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 269 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 76/254 (29%), Gaps = 14/254 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I LI + + S L IK G K G F A+G GFD Sbjct: 10 MKLFRSLFIAGLIQAAALTAAHAQSGLEQIKSAGTFKIGTEGTYAPFTFHDASGQLTGFD 69 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RA++ + Q++ L +K+ D + T R+ F Sbjct: 70 VDIGRAIAERLGVKA---QFVEGKWDGLIAGLDAKRYDAVINQVGITDARKA--KYDFSD 124 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ I S L G T+ LA A + + Sbjct: 125 PYISSAAVLIVRDDNTSIKSFDDLKGKKSA-NTLTSNFGKLAQSHGA-----EVVAVQGF 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWY 238 E + R +A D + K + D S I +G+ E Sbjct: 179 NEAIDLLTSGRVEATVNDNLSFLDFKKQKPNAKVKIAATDKTAEFSNSGVLIRKGNPELQ 238 Query: 239 NIVSWTHYAMVTAE 252 ++ A + A+ Sbjct: 239 AAINKAL-ADIKAD 251 >gi|241890064|ref|ZP_04777362.1| amino acid ABC transporter, amino acid-binding protein [Gemella haemolysans ATCC 10379] gi|241863686|gb|EER68070.1| amino acid ABC transporter, amino acid-binding protein [Gemella haemolysans ATCC 10379] Length = 278 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 83/257 (32%), Gaps = 14/257 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K F L + +L T ++ D + + G + V +G Sbjct: 1 MRKLRFFLTLVITVLIITGCASGGKDKPKKDNWNDFQTDKKIVIGFDNTFVPMGFQDKSG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+D A+ K+++ +N + L++ ID++ T RE + Sbjct: 61 KNVGFDIDLANAVFEKYG---IKVEWQAINWDLKETELKNGNIDLIWNGYSKTAEREAVV 117 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KY 171 F + Q ++ K KG+ +V+ L + Q G++ T + + Sbjct: 118 Q--FTKQYMVNEQVVVVKKSKGVKNVTDLKDKILGAQNGSSGYDTFNENPEVLKNIVKNN 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 +E E R DA D ++ + IL A Sbjct: 176 DATQYESFNEALIDLENDRIDALLIDRVYANYYLKQQNKLEDFDILNAGFDSEAFAVGAR 235 Query: 232 QGDTEWYNIVSWTHYAM 248 + D ++ Y M Sbjct: 236 KADVTLVKKINEAFYEM 252 >gi|227432357|ref|ZP_03914349.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351878|gb|EEJ42112.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 490 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 96/278 (34%), Gaps = 26/278 (9%) Query: 3 KDFFVSILCLI----ILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAE---VK 51 K + I+ + +L +A+ L IKK+G L G++ F V Sbjct: 6 KKISIVIMTITMLLPLLAVLPTHADAATTDPALTKIKKKGTLVIGLSADYAPFEFHATVY 65 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 GFDV+ + ++ + P + ALQ+ +ID++ + T RE Sbjct: 66 GRDQIVGFDVEMAKKIAKDLGVKP---VIKEMGFDGLIGALQTGKIDVIISGVNATPERE 122 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS---GASICVQAGTTTELTLADYFKAHN 168 + F Q ++ KK L+ G I VQ TT E + Sbjct: 123 KV--VDFSNSYMKPLQTVMVLKKDASKYSGNLNSFSGKKIGVQKQTTQETYAQESM---- 176 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLA 227 + ++V ++ A + + A + +I P S ++ Sbjct: 177 SGSTIVSLQKVPDLVAQLSTGKIAGIVLNEPISKAYTQQ--NKAFKIIYPKPSSGEGAVS 234 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 A+ + ++ + ++ + EL QK N++ Sbjct: 235 IAMPKNSPVLKAKINKSLGNIIKSGELEAYQKRANKLM 272 >gi|223039536|ref|ZP_03609823.1| TcmP [Campylobacter rectus RM3267] gi|222879107|gb|EEF14201.1| TcmP [Campylobacter rectus RM3267] Length = 273 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 85/264 (32%), Gaps = 23/264 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTN--ASILGDIKK-------RGFLKCGINTGLVGFAEVKA 52 +K FV + ++L S+N AS +K + ++ G + F + Sbjct: 14 FKKLFVFAVTALMLSGCGQSSNEKASKDAAVKNEAAPVAVQQTIRVGSSADYPPFEYIDE 73 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GF++D A+ I ++ AL++ +ID T R Sbjct: 74 HNKIVGFEIDMIEAVGKKIGVK---FDIQNMSFDGLIPALKTGKIDAALSGMSATEERRK 130 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F YF FI K + ++ ++ ++ + TL + Sbjct: 131 --SVDFTKPYYFSDNLFIRKKG------ADVNATNMHLKKISAQVGTLQETAAKSICGDL 182 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E V A +A + D D Y N E + LPD A A + Sbjct: 183 AVPAENVAAAILALKAGKIDIVLTDSPIGYEYLKQNSDLEEFLKLPD--GTEGFAVAFDK 240 Query: 233 GDT-EWYNIVSWTHYAMVTAEELG 255 G E + + + E Sbjct: 241 GKHLELIGKIDAAIEELKKSGEFD 264 >gi|254508519|ref|ZP_05120637.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus 16] gi|219548544|gb|EED25551.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus 16] Length = 258 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 46/226 (20%), Positives = 78/226 (34%), Gaps = 14/226 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + K ++ GI F+ +A+G KGFDVD AL + + K + + + Sbjct: 18 SGVAQAKDWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCTEM---QVKCKIVAQD 74 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +L +++ D + T R+ + F FI K G+ L Sbjct: 75 WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGAGL-DFDNLD 131 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G I VQ TT + L D + K + + +E R A GD SAL Sbjct: 132 GQKIAVQRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEG 188 Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 L + + ++ A+ + D + + Sbjct: 189 VLNKAGGEAYEFVGPSLTDPKWFGEGFGIAVRKQDKDLTQKLDAAI 234 >gi|319442374|ref|ZP_07991530.1| putative extracellular solute-binding protein [Corynebacterium variabile DSM 44702] Length = 369 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 84/230 (36%), Gaps = 15/230 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQ 79 +T + DI RG L G++ + G+ GF+VD ++ IF DP ++ Sbjct: 76 ATPEQRVPDIIDRGRLIVGVSQSMNQLGFRDPVTGEMAGFEVDIAHEIARDIFGDPDRVD 135 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + + R AL+ +DI+ R+ T R + + F ++++ GI+S Sbjct: 136 FRYIEGDGRDEALRDGDVDIVIRSMTVT--RLRQMNVEFSIPYLTVSPRLLVNRNSGIAS 193 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+ ++C +T+ +L ++ E + A + + DA D + Sbjct: 194 EEDLADKTVCATTRSTSAQSLTSI-----DHNRLLLTETWPDCLMAMQHGQVDAIYSDSA 248 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAII----QGDTEWYNIVSWTH 245 L L + ++ A A + V+ T Sbjct: 249 VLSGLLAQDPN---TELVGMSDHTDHYAVATAPPTIRNTAGLVRQVNTTL 295 >gi|271500849|ref|YP_003333874.1| cationic amino acid ABC transporter periplasmic-binding protein [Dickeya dadantii Ech586] gi|270344404|gb|ACZ77169.1| cationic amino acid ABC transporter, periplasmic binding protein [Dickeya dadantii Ech586] Length = 244 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 38/250 (15%), Positives = 75/250 (30%), Gaps = 25/250 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + ++ + F + A+ GFD Sbjct: 1 MRKLILAALLASTTFSALATE-------------TIRFAASATYPPFESLDADNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + AL+ ++ D + D T R + F Sbjct: 48 IDLANALCKQL---QATCSFTNQAFDSLIPALKFRRYDAIISGMDITPERSKQVA--FTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K S++ L G I ++ GTT + L + + ++ + Sbjct: 103 PYYANSAIVIAQKG-KFHSLADLKGKRIGMENGTTHQKFLQEKHPE----VTTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + N + I L A+ + Sbjct: 158 NALIDLKNGRLDGVFGDTAVVNEWLKNNPDLATVGEKITDPTYFGIGLGIAVRPDNQALL 217 Query: 239 NIVSWTHYAM 248 ++ A+ Sbjct: 218 EKLNGALNAI 227 >gi|261819591|ref|YP_003257697.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] gi|261603604|gb|ACX86090.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] Length = 255 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 71/246 (28%), Gaps = 15/246 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F L L TS +A L IK G +K G + +G GFD Sbjct: 1 MKKIRF--ALLTSALLATSVFAHADDLSAIKSAGVIKFGTEGTYAPYTYHDKSGQLVGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RA++ + I+ + +K+ D + T R + F Sbjct: 59 VDVGRAVAEKLGVKAQFIEGR---WDGLIAGIDAKRYDAVINQVGVTKER--QVKYDFSK 113 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ I S L G Q+ T+ A + A + + Sbjct: 114 PYIDSKAVLVVRGDNTAIKDFSDLKGKKSA-QSLTSNYSKQATSYGA-----EIVPTDGF 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R DA D + K I P A + + Sbjct: 168 NQSLDLVLSGRADATLNDNLSFLDFKKHKPDA-NVKIAATSKDGEPSAILVRKDQAPLVE 226 Query: 240 IVSWTH 245 ++ Sbjct: 227 ALNKAL 232 >gi|169831296|ref|YP_001717278.1| extracellular solute-binding protein [Candidatus Desulforudis audaxviator MP104C] gi|169638140|gb|ACA59646.1| extracellular solute-binding protein, family 3 [Candidatus Desulforudis audaxviator MP104C] Length = 268 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 76/251 (30%), Gaps = 13/251 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK--GF 59 K + L + + ++ L +T F G+ GF Sbjct: 6 KKVLALFFLVTFLFVVVGCGGGQTTPAPAPEKQKLTVASDTAYAPFEMQGGPGEPTYIGF 65 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D RA+ + + ++ + + ALQS +D T R + + Sbjct: 66 DMDLIRAIGEVLGKE---VEIISMGFDGIIPALQSGSVDCAISAMTITEERAKVVNFS-V 121 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 P + I L+G I VQ GTT L + A F + Sbjct: 122 PYYESGLITAVRADNNDIKGFEDLAGKKIAVQIGTTGALKAQEVPDAK-----ISTFNTI 176 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + DA D L + ++ D++S A+ +G + N Sbjct: 177 DLAFLELKKGAVDAVINDAP--VTLYFIQQGNEDVKVVGDLLSGEFYGIAVPKGKEDLLN 234 Query: 240 IVSWTHYAMVT 250 ++ + Sbjct: 235 QINDALKTLKE 245 >gi|300765934|ref|ZP_07075906.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes FSL N1-017] gi|300513320|gb|EFK40395.1| amino acid ABC transporter, amino acid-binding protein [Listeria monocytogenes FSL N1-017] Length = 178 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 67/165 (40%), Gaps = 8/165 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++++ +++L + S+ S IKK + G++ V + + Sbjct: 1 MKKGLLITVMLMVMLALGACSSGESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D +A+ + ++ P++ + L++ ID++ T R+ + Sbjct: 61 GFDIDLAKAVFAEYGIKA---KFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVA-- 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 F + Q + K I+ S + ++ Q G ++ +A Sbjct: 116 FSQPYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAK 160 >gi|90962592|ref|YP_536508.1| amino acid ABC transporter substrate-binding protein [Lactobacillus salivarius UCC118] gi|301301156|ref|ZP_07207313.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus salivarius ACS-116-V-Col5a] gi|90821786|gb|ABE00425.1| Amino acid ABC transporter, substrate binding protein [Lactobacillus salivarius UCC118] gi|300851285|gb|EFK79012.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 272 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 82/250 (32%), Gaps = 21/250 (8%) Query: 6 FVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 FV + L + F + AS ++K++G L G+ ++ +G G Sbjct: 13 FVGVASLGLAFNVARPAQASADKISAATSSELKQKGTLTIGLEGTFAPYSYR-KDGKLTG 71 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+V+ + ++ + +++P + + + DI+ N T R+ G F Sbjct: 72 FEVELGKDIAKQMGLKA---KFVPTKWDGLIEGVNTGKYDIVLNNVTVTKERQAKFG--F 126 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + I K G++++ + G I GT + A + Sbjct: 127 STPYIYSHFALISKKGSGLNTLKDIKGVKIASGTGTDNSVV------AKKFGAKVVPSSE 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGDTE 236 R R +SA YA K + P ++ + + +T+ Sbjct: 181 FSTSLDMVRQGRVKGTINSMSAWYAYKKDGKNVKGLQAKDVSKDEKPAKISALMAKKNTD 240 Query: 237 WYNIVSWTHY 246 V+ Sbjct: 241 LKKDVNKALK 250 >gi|254695720|ref|ZP_05157548.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 3 str. Tulya] gi|261216129|ref|ZP_05930410.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 3 str. Tulya] gi|260917736|gb|EEX84597.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 3 str. Tulya] Length = 257 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 72/246 (29%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ +I + + L IK G LK G F + GFD Sbjct: 1 MKFAQILATAGIIQAVLFTGAMAGENLDAIKSAGVLKIGTEGTYAPFTYHDKDNKLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A++ + P ++ L + + D + T R+ F Sbjct: 61 VEIGEAIAGKLSVKPG---FVEGKWDGLIAGLDANRYDAVINQVGITEERKK--KFNFSN 115 Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + K I + L G Q+ T+ LA A + + Sbjct: 116 PYIVSKVVLIVNDKNDTIKDFADLKGKK-AAQSLTSNYGHLAKEAGAK-----LVATDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ R DA D + + + ++ + + + +GD E Sbjct: 170 DQSIQLVLTGRADATLNDSLSYLDFRKHQPKAPV-KVVAEKDEATASGIIVRKGDDELVA 228 Query: 240 IVSWTH 245 ++ Sbjct: 229 AINKAL 234 >gi|320325715|gb|EFW81776.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. B076] Length = 273 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 21/257 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I L+ L ++ + + L ++K L + F+ + + GFD Sbjct: 1 MKYRALLGI-GLVTLAASTQALAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ + ++ + S + DI + + R Sbjct: 60 VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174 + I S LSG + + + ++ E L + P+ Sbjct: 116 YYASPAVIVVNASDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFDD 175 Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 ++ R DA + L K D+ + + + + P + Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGETLYEEPNS 232 Query: 228 PAIIQGDTEWYNIVSWT 244 AI + D EW V Sbjct: 233 VAIEKDDPEWDAKVREV 249 >gi|104773641|ref|YP_618621.1| glutamine ABC transporter, glutamine-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422722|emb|CAI97349.1| Glutamine ABC transporter, glutamine-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|325125283|gb|ADY84613.1| Glutamine ABC transporter solute-binding component [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 279 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 79/236 (33%), Gaps = 16/236 (6%) Query: 18 TSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 ++ + + + +K + G+ + F +GF++D R L+ I Sbjct: 24 SACAVESDNSVRVYNHVKSSKTITWGVKFDMALFGIKSVKTNKLEGFEIDLARLLTKEIL 83 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 K +++ + A+ + L++ +D + T R+ + F + G + Sbjct: 84 GKDGKAKFIEVTAQTKIPQLKNNNLDAVLATMTITNERKK--SVDFSTPYFKAGTSLMTK 141 Query: 133 KKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 I S+ L+ G + V GTT +A A A + Sbjct: 142 TSSPIKSIKDLNHKGRVVIVAKGTTAADDIARLAPKA----TIRQHNDYGACTNALLAGQ 197 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 DA D L + + ++ ++ P A+ +G T+ ++ Sbjct: 198 GDAVATDNGILAGIAKQHK---SLHLVGGTVAVEPYGIAVEKGQTKMLEAINKALK 250 >gi|296113902|ref|YP_003627840.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis RH4] gi|295921596|gb|ADG61947.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis RH4] gi|326561452|gb|EGE11802.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis 46P47B1] gi|326562223|gb|EGE12551.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis 7169] gi|326565595|gb|EGE15758.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis 12P80B1] gi|326567177|gb|EGE17299.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis BC1] gi|326568459|gb|EGE18539.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis BC7] gi|326572013|gb|EGE22015.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis BC8] gi|326573960|gb|EGE23910.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis O35E] gi|326574951|gb|EGE24881.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis 101P30B1] Length = 262 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 35/238 (14%), Positives = 74/238 (31%), Gaps = 10/238 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKR---GFLKCGINTGLVGFAEVKANGDWK 57 M K F + S + + F + A+G Sbjct: 1 MIKPFATLATVACVTLAGCTKEETSTQTTAPAQPSQKSIVIATEAAYPPFNDTDASGQII 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD AL + + + Q + + +L + + D + T R+ + Sbjct: 61 GFDVDVMNALCAEM---HAHCQIIAQDWDGLIPSLLAGKYDAIIAGMSITPERQA--QVD 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + + ++ K G + ++ ++ Q GTT + + + + + Sbjct: 116 FSDSYFSNTIVWL-AKSDGSFDPNNITNQTLASQRGTTGAAYITEKYD-GKDGNRVQLHD 173 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +A R A + + +I +I + L A+ +GD+ Sbjct: 174 TYTNAYLDTKAGRNHAVMAEKVSAIDWLKQEGNGEFGLIGEEIDNNDHLGIAVRKGDS 231 >gi|330833057|ref|YP_004401882.1| amino acid ABC transporter amino acid-binding protein [Streptococcus suis ST3] gi|329307280|gb|AEB81696.1| amino acid ABC transporter, amino acid-binding protein [Streptococcus suis ST3] Length = 280 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 76/251 (30%), Gaps = 13/251 (5%) Query: 2 YKDFFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K ++ + L + +T + + + G + V + +G + Sbjct: 6 KKMMLGALALVTSLTLAACGSNDSATKSDNWTAYESEKSVTIGFDKTFVPMGFEQTDGSY 65 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D A+ +++ P++ + L + ID++ T R+ + Sbjct: 66 TGFDIDLANAVFEKYG---ITVKWQPIDWDLKETELNNGNIDLIWNGYSITDERKE--KV 120 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHP 173 F + Q + K IS VS + + QAG++ K Sbjct: 121 LFTNPYMDNQQVLVTKKSSNISQVSDMKDKILGAQAGSSGYSVFESQPAILKDIVQNNDA 180 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + E + R D D +++ I+ A + Sbjct: 181 SQYATFNEALIDLKNDRIDGLLIDRVYANYYLQQEGIIADYNIIDAGFENEAFAVGARKS 240 Query: 234 DTEWYNIVSWT 244 DT ++ Sbjct: 241 DTTLVENINKA 251 >gi|315657916|ref|ZP_07910790.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus lugdunensis M23590] gi|315496952|gb|EFU85273.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus lugdunensis M23590] Length = 497 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 76/221 (34%), Gaps = 21/221 (9%) Query: 1 MYKDFFVSILCLIILFFT-------SFSTNASILGDIKKRGFLKCGINTGLVGFAE---V 50 M K + ++ I+ T + + IK+ G LK G++ V Sbjct: 13 MKKLIQLLMVVAIVCGLTIANITPIAHAEQDKNWEKIKESGELKVGLSADYAPMEFEHNV 72 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 ++ G D++ + ++ + K++ + + AL++ +IDI+ T R Sbjct: 73 NGKNEYAGVDIELAKKIAKD---NHLKLKIINMQFDSLLGALKTGKIDIIISGMTSTPER 129 Query: 111 EISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 + + F + ++ K S+ L+ I VQ T E + Sbjct: 130 KK--EVDFSDPYMYSNNTVLVKKSDAKKYHSLKDLANKKIAVQKSTEQEKIAQTEIE--- 184 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 R+ + + ++H+ DA + A N Sbjct: 185 -NASITSLTRLPDAILSLKSHKVDAVVIEKPVAEAYLKQNK 224 >gi|289550425|ref|YP_003471329.1| Glutamate ABC transporter, periplasmic glutamine-binding protein [Staphylococcus lugdunensis HKU09-01] gi|289179957|gb|ADC87202.1| Glutamate ABC transporter, periplasmic glutamine-binding protein [Staphylococcus lugdunensis HKU09-01] Length = 485 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 76/221 (34%), Gaps = 21/221 (9%) Query: 1 MYKDFFVSILCLIILFFT-------SFSTNASILGDIKKRGFLKCGINTGLVGFAE---V 50 M K + ++ I+ T + + IK+ G LK G++ V Sbjct: 1 MKKLIQLLMVVAIVCGLTIANITPIAHAEQDKNWEKIKESGELKVGLSADYAPMEFEHNV 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 ++ G D++ + ++ + K++ + + AL++ +IDI+ T R Sbjct: 61 NGKNEYAGVDIELAKKIAKD---NHLKLKIINMQFDSLLGALKTGKIDIIISGMTSTPER 117 Query: 111 EISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 + + F + ++ K S+ L+ I VQ T E + Sbjct: 118 KK--EVDFSDPYMYSNNTVLVKKSDAKKYHSLKDLANKKIAVQKSTEQEKIAQTEIE--- 172 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 R+ + + ++H+ DA + A N Sbjct: 173 -NASITSLTRLPDAILSLKSHKVDAVVIEKPVAEAYLKQNK 212 >gi|254711106|ref|ZP_05172917.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella pinnipedialis B2/94] gi|256029487|ref|ZP_05443101.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella pinnipedialis M292/94/1] gi|261318696|ref|ZP_05957893.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis B2/94] gi|265986495|ref|ZP_06099052.1| extracellular solute-binding protein [Brucella pinnipedialis M292/94/1] gi|261297919|gb|EEY01416.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis B2/94] gi|264658692|gb|EEZ28953.1| extracellular solute-binding protein [Brucella pinnipedialis M292/94/1] Length = 253 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 83/248 (33%), Gaps = 18/248 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + +I + + ++ ++ F V ++G +G D Sbjct: 1 MLKAIVFAGIASVIAVLPAQA---------REWKEIRIATEGAYPPFNFVASDGSLQGLD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL A+ +K + + L+S + D + + T R+ + F Sbjct: 52 VDIAKALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 106 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + K I+S G ++ Q TT D + ++ Sbjct: 107 KYYSTPLSVAVPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E +A ++ R DA D + + +I +++ A A+ GD + Sbjct: 165 ADEANADLKSGRLDAVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTAVALRLGDDDLR 224 Query: 239 NIVSWTHY 246 + Sbjct: 225 EQFNAAIK 232 >gi|157369722|ref|YP_001477711.1| glutamine ABC transporter periplasmic protein [Serratia proteamaculans 568] gi|157321486|gb|ABV40583.1| cationic amino acid ABC transporter, periplasmic binding protein [Serratia proteamaculans 568] Length = 247 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 79/247 (31%), Gaps = 22/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F VS+ L + F S L +T V F + + + GFD Sbjct: 1 MKSIFKVSLAALSLAFAVSSHAA----------DKLVVATDTAFVPFEFKQGD-KYVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + D P++ ALQ+K ID+ T R+ + F Sbjct: 50 IDLWAAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITEERKK--AIEFSD 104 Query: 121 ITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G + I + L+G + V++GT + + K F + Sbjct: 105 GYYKSGLLVMVNANDNNIKGIDDLNGKVVAVKSGTGSVDYAKQHIKTK----DLRQFPNI 160 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + + + + + + A +G E Sbjct: 161 DNAYMELGTKRADAVLHDTPNIL-YFIKTAGAGKFKTVGESLEAQQYGIAFPKGSDELRV 219 Query: 240 IVSWTHY 246 V+ Sbjct: 220 KVNGALK 226 >gi|227502018|ref|ZP_03932067.1| amino acid ABC superfamily ATP binding cassette transporter glutamin-binding protein [Corynebacterium accolens ATCC 49725] gi|227077302|gb|EEI15265.1| amino acid ABC superfamily ATP binding cassette transporter glutamin-binding protein [Corynebacterium accolens ATCC 49725] Length = 335 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 84/223 (37%), Gaps = 15/223 (6%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 DI KRG L G++ + A +GD +GF+VD ++ IF DP+K+ + + + + Sbjct: 85 DILKRGRLIVGVDRSNNLLSYRDAASGDVRGFEVDIAHEIARDIFGDPNKVDFRFVESSD 144 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R AL + +DI+ R + RE + F ++ G++S+ G Sbjct: 145 RTAALDNGTVDIIVRTMTISPEREKEVA--FSIPYMTTQTRMLVLTSSGMNSIDDADGKR 202 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C G+T D + + ++ + A + ++ D D + L + Sbjct: 203 LCGVRGSTAL----DTIRERAPQSDILITRSWGDCLMALQLNQADGVVVDDALLSGMAAQ 258 Query: 208 NDRPSEHVILPDIISKSPLAPAII-----QGDTEWYNIVSWTH 245 + I+ + + A V+ T Sbjct: 259 DS---YTSIVGEPLKTENYGVAARLPNKDHDTRPLLRQVNSTL 298 >gi|84496801|ref|ZP_00995655.1| glutamate-binding protein of ABC transporter system [Janibacter sp. HTCC2649] gi|84383569|gb|EAP99450.1| glutamate-binding protein of ABC transporter system [Janibacter sp. HTCC2649] Length = 280 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 87/242 (35%), Gaps = 10/242 (4%) Query: 17 FTSFSTNASILGD--IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 T+ +A G +K GI G + + G DVD + ++ + Sbjct: 19 LTACGDSADDGDTGSTSSAGKIKIGIKFDQPGLGLKSGS-SYSGLDVDVAKYVAKELGHA 77 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 I+++ + +R + + Q+ ++ T R+ + ++F + GQ ++ Sbjct: 78 EGDIEFVQAPSAQRETLISTGQVQMIFATYSITDKRKAT--VSFAGPYFIAGQDLLVRAD 135 Query: 135 KG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I+ L+G +C G+T+ + D F F E AA + DA Sbjct: 136 DTSITGPETLTGKKLCSVTGSTSAQNVKDKFP----GVQLQQFGTYSECVAALASKGIDA 191 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 T D + L + + ++ S+ I +GDT ++ M+ + + Sbjct: 192 LTTDNTILAGYAAQDQYKGKLKVVGKTFSEERYGVGIKKGDTALCGKINTALTKMIDSGD 251 Query: 254 LG 255 Sbjct: 252 WQ 253 >gi|325833848|ref|ZP_08166198.1| ABC transporter, substrate-binding protein, family 3 [Eggerthella sp. HGA1] gi|325485206|gb|EGC87678.1| ABC transporter, substrate-binding protein, family 3 [Eggerthella sp. HGA1] Length = 276 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 77/243 (31%), Gaps = 14/243 (5%) Query: 13 IILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 ++L S +A G L G + G + V +G + GFD++ +A+ Sbjct: 20 VMLAGCSGGGDAQSADSAATDGSFTLAVGFDQGYPPYGYVGDDGQFTGFDLELAKAVCEK 79 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + ++ P++ + + S I+ + F ++ Q + Sbjct: 80 NGWE---LKLEPIDWDAKDALIGSGTINCIWNGFTM---ENRENDYTFSEPYMYNEQVVV 133 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH---NMKYHPIVFERVEEIDAAYR 187 + K + L+G ++ Q + L D + Sbjct: 134 VKKDGDAKKLEDLAGKTVLTQVDSAALHVLEDEKGQKALADTFKELQTIGDYNNAFMQLE 193 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 + DA D+S A +P +V L + A +GDTE V+ A Sbjct: 194 SGMVDAVACDLSI--ASYQMAAKPDTYVKLGVLAP-ENYAVGFKKGDTELAKQVTDALKA 250 Query: 248 MVT 250 + Sbjct: 251 LDE 253 >gi|298290887|ref|YP_003692826.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296927398|gb|ADH88207.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 261 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 78/243 (32%), Gaps = 20/243 (8%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 + + +A K+ ++ G F + N + KGFD+D +AL + Sbjct: 16 TMGASLSGASA------KEWKTVRIGTEGAYPPFNYI-ENNELKGFDIDIGKALCEKM-- 66 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 ++ + AL + + D + + T R+ + F Y F + K Sbjct: 67 -KVTCTFVAQDWDGIIPALLAGKYDAIVASMSITEERKK--QINFSKKYYKTPATFAVPK 123 Query: 134 KKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 I +S + L G ++ Q T L D + ++ + +E + R Sbjct: 124 DSKITDTSPASLKGKTLGAQGSTIHSNYLEDVYAKAG--AEVKLYGKQDEANLDLANGRL 181 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDI----ISKSPLAPAIIQGDTEWYNIVSWTHYA 247 DA D L + D + + I + D E + + Sbjct: 182 DAVLADKVVLLEWLNSKDGACCKFTGAEYTDPKYFGEGVGVGIRKDDPELVAMFNKAIDE 241 Query: 248 MVT 250 +V Sbjct: 242 IVA 244 >gi|254720388|ref|ZP_05182199.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. 83/13] gi|265985407|ref|ZP_06098142.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13] gi|306837483|ref|ZP_07470359.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. NF 2653] gi|264663999|gb|EEZ34260.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13] gi|306407526|gb|EFM63729.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. NF 2653] Length = 253 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 83/248 (33%), Gaps = 18/248 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + +I + + ++ ++ F V ++G +G D Sbjct: 1 MLKAIVFAGIASVIAVLPAQA---------REWKEIRIATEGAYPPFNFVASDGSLQGLD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL A+ +K + + L+S + D + + T R+ + F Sbjct: 52 VDIAKALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 106 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + K I+S G ++ Q TT D + ++ Sbjct: 107 KYYSTPLSVAVPKDSDITSIAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E +A ++ R DA D + + +I +++ A A+ GD + Sbjct: 165 ADEANADLKSGRLDAVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTAVALRLGDDDLR 224 Query: 239 NIVSWTHY 246 + Sbjct: 225 EQFNAAIK 232 >gi|23500375|ref|NP_699815.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella suis 1330] gi|62317516|ref|YP_223369.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella abortus bv. 1 str. 9-941] gi|83269499|ref|YP_418790.1| glutamate-binding protein [Brucella melitensis biovar Abortus 2308] gi|148558167|ref|YP_001257613.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella ovis ATCC 25840] gi|161620690|ref|YP_001594576.1| extracellular solute-binding protein [Brucella canis ATCC 23365] gi|163844780|ref|YP_001622435.1| hypothetical protein BSUIS_B0627 [Brucella suis ATCC 23445] gi|189022772|ref|YP_001932513.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus S19] gi|254691015|ref|ZP_05154269.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus bv. 6 str. 870] gi|254698800|ref|ZP_05160628.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus bv. 2 str. 86/8/59] gi|254732245|ref|ZP_05190823.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus bv. 4 str. 292] gi|256015407|ref|YP_003105416.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella microti CCM 4915] gi|256111451|ref|ZP_05452471.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella melitensis bv. 3 str. Ether] gi|256256201|ref|ZP_05461737.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus bv. 9 str. C68] gi|260544754|ref|ZP_05820575.1| amino acid ABC transporter [Brucella abortus NCTC 8038] gi|260568087|ref|ZP_05838556.1| amino acid ABC transporter [Brucella suis bv. 4 str. 40] gi|260756610|ref|ZP_05868958.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 6 str. 870] gi|260760040|ref|ZP_05872388.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 4 str. 292] gi|260763279|ref|ZP_05875611.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 2 str. 86/8/59] gi|260882427|ref|ZP_05894041.1| extracellular solute-binding protein [Brucella abortus bv. 9 str. C68] gi|265992954|ref|ZP_06105511.1| extracellular solute-binding protein [Brucella melitensis bv. 3 str. Ether] gi|294853579|ref|ZP_06794251.1| polar amino acid transport system substrate-binding protein [Brucella sp. NVSL 07-0026] gi|297249559|ref|ZP_06933260.1| polar amino acid transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] gi|306840710|ref|ZP_07473459.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. BO2] gi|23463993|gb|AAN33820.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella suis 1330] gi|62197709|gb|AAX76008.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus bv. 1 str. 9-941] gi|82939773|emb|CAJ12778.1| Solute-binding protein/glutamate receptor:Ionotropic glutamate receptor:Bacterial extracellular solute-binding protein, family 3 [Brucella melitensis biovar Abortus 2308] gi|148369452|gb|ABQ62324.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella ovis ATCC 25840] gi|161337501|gb|ABX63805.1| extracellular solute-binding protein family 3 [Brucella canis ATCC 23365] gi|163675503|gb|ABY39613.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|189021346|gb|ACD74067.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus S19] gi|255998067|gb|ACU49754.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella microti CCM 4915] gi|260098025|gb|EEW81899.1| amino acid ABC transporter [Brucella abortus NCTC 8038] gi|260154752|gb|EEW89833.1| amino acid ABC transporter [Brucella suis bv. 4 str. 40] gi|260670358|gb|EEX57298.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 4 str. 292] gi|260673700|gb|EEX60521.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 2 str. 86/8/59] gi|260676718|gb|EEX63539.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 6 str. 870] gi|260871955|gb|EEX79024.1| extracellular solute-binding protein [Brucella abortus bv. 9 str. C68] gi|262763824|gb|EEZ09856.1| extracellular solute-binding protein [Brucella melitensis bv. 3 str. Ether] gi|294819234|gb|EFG36234.1| polar amino acid transport system substrate-binding protein [Brucella sp. NVSL 07-0026] gi|297173428|gb|EFH32792.1| polar amino acid transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] gi|306289283|gb|EFM60527.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. BO2] Length = 253 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 83/248 (33%), Gaps = 18/248 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + +I + + ++ ++ F V ++G +G D Sbjct: 1 MLKAIVFAGIASVIAVLPAQA---------REWKEIRIATEGAYPPFNFVASDGSLQGLD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL A+ +K + + L+S + D + + T R+ + F Sbjct: 52 VDIAKALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 106 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + K I+S G ++ Q TT D + ++ Sbjct: 107 KYYSTPLSVAVPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E +A ++ R DA D + + +I +++ A A+ GD + Sbjct: 165 ADEANADLKSGRLDAVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTAVALRLGDDDLR 224 Query: 239 NIVSWTHY 246 + Sbjct: 225 EQFNAAIK 232 >gi|300215199|gb|ADJ79615.1| Amino acid ABC transporter, substrate binding protein [Lactobacillus salivarius CECT 5713] Length = 272 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 82/250 (32%), Gaps = 21/250 (8%) Query: 6 FVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 FV + L + F + AS ++K++G L G+ ++ +G G Sbjct: 13 FVGVASLGLAFNVARPAQASADKISAATSSELKQKGTLTIGLEGTFAPYSYR-KDGKLTG 71 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+V+ + ++ + +++P + + + DI+ N T R+ G F Sbjct: 72 FEVELGKDIAKQMGLKA---KFVPTKWDGLIEGVNTGKYDIVLNNVTVTKERQAKFG--F 126 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + I K G++++ + G I GT + A + Sbjct: 127 STPYIYSHFALISKKGSGLNTLKDIKGVKIASGTGTDNSVV------AKKFGAKVVPSSE 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGDTE 236 R R +SA YA K + P ++ + + +T+ Sbjct: 181 FSTSLDMVRQGRVKGTINSMSAWYAYKKDGKNVKGLQAKDVSKDEKPAKISALMAKKNTD 240 Query: 237 WYNIVSWTHY 246 V+ Sbjct: 241 LKKDVNKALK 250 >gi|323498051|ref|ZP_08103058.1| amino acid ABC transporter amino acid-binding protein [Vibrio sinaloensis DSM 21326] gi|323316899|gb|EGA69903.1| amino acid ABC transporter amino acid-binding protein [Vibrio sinaloensis DSM 21326] Length = 256 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 45/224 (20%), Positives = 78/224 (34%), Gaps = 14/224 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 + K+ ++ GI F+ +A+G KGFDVD AL + + K + + + Sbjct: 18 VAQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCTEM---QVKCKIVAQDWD 74 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 +L +++ D + T R+ + F FI K G+ L G Sbjct: 75 GIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGAGL-DFENLDGQ 131 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 I VQ TT + L D + K + + +E R A GD SAL L Sbjct: 132 KIAVQRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEGVL 188 Query: 207 TNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 + + ++ A+ + D + + Sbjct: 189 NKAGGEAYEFVGPSLTDPKWFGEGFGIAVRKQDKDLTKKLDAAI 232 >gi|322832617|ref|YP_004212644.1| cationic amino acid ABC transporter periplasmic binding protein [Rahnella sp. Y9602] gi|321167818|gb|ADW73517.1| cationic amino acid ABC transporter, periplasmic binding protein [Rahnella sp. Y9602] Length = 259 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 91/254 (35%), Gaps = 22/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L ++ + ++ ++ G + F A+G +GFD Sbjct: 1 MKKTLALFSLGLAMIGLSGHASAQQ---------QIRFGTDATFPPFEFKAADGSLQGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + + +K ++ ALQ+++ D + + T R+ + F Sbjct: 52 IDLGNAICAQL---KAKCVWVENGFDGLIPALQARKFDAIISSLSITDERKK--AINFSD 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K G+ +++ L G + VQ G+ E ++++ + + Sbjct: 107 KLFNTPAYLVASKDSGLKPLAESLRGKRVGVQQGSVFEAYAKKHWQSQG--VELVSYPGA 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 E + A R DA D + + L + ++ + + I + + Sbjct: 165 EAVYADLVVGRLDATLDDATVVTTALLDKPQGKNFSLIEPQVKDDAIFGPGTGIGISKQN 224 Query: 235 TEWYNIVSWTHYAM 248 E ++ A+ Sbjct: 225 AELLEQLNGAIKAI 238 >gi|227891346|ref|ZP_04009151.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus salivarius ATCC 11741] gi|227866924|gb|EEJ74345.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus salivarius ATCC 11741] Length = 277 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 82/250 (32%), Gaps = 21/250 (8%) Query: 6 FVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 FV + L + F + AS ++K++G L G+ ++ +G G Sbjct: 18 FVGVASLGLAFNVARPAQASADKISAATSSELKQKGTLTIGLEGTFAPYSYR-KDGKLTG 76 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+V+ + ++ + +++P + + + DI+ N T R+ G F Sbjct: 77 FEVELGKDIAKQMGLKA---KFVPTKWDGLIEGVNTGKYDIVLNNVTVTKERQAKFG--F 131 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + I K G++++ + G I GT + A + Sbjct: 132 STPYIYSHFALISKKGSGLNTLKDIKGVKIASGTGTDNSVV------AKKFGAKVVPSSE 185 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGDTE 236 R R +SA YA K + P ++ + + +T+ Sbjct: 186 FSTSLDMVRQGRVKGTINSMSAWYAYKKDGKNVKGLQAKDVSKDEKPAKISALMAKKNTD 245 Query: 237 WYNIVSWTHY 246 V+ Sbjct: 246 LKKDVNKALK 255 >gi|325569897|ref|ZP_08145891.1| amino acid ABC superfamily ATP binding cassette transporter binding protein [Enterococcus casseliflavus ATCC 12755] gi|325157020|gb|EGC69188.1| amino acid ABC superfamily ATP binding cassette transporter binding protein [Enterococcus casseliflavus ATCC 12755] Length = 281 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 89/290 (30%), Gaps = 29/290 (10%) Query: 1 MYKDFFVSILCLIILFFTSFST--------------NASILGDIKKRGFLKCGINTGLVG 46 M K F ++ IL + + L IK G L + Sbjct: 1 MKKLFGALVVLTGILVLGACGNGGSSSTGSSSASGSADNQLEAIKAAGVLNVATSADFAP 60 Query: 47 FAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F + G D+D ++ + + + L L+ ALQ + DI Sbjct: 61 FEFHALIDGKDTIVGADIDMVNEIADRLGVE---VNILDLDFNAVLTALQQGKADIAVSG 117 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLA 161 T R F + Q +++K S+ LSG + Q G+ E+ + Sbjct: 118 ISATDER--KQTFDFTDNYFTPEQKVVVNKNNESAFDSIESLSGKKVGAQKGSIQEMIVQ 175 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 D + +V + + D + + + ND + + Sbjct: 176 DQLA----DSQLVSIAKVPNLVNELKQGSIDGLVLESAVAESYVAQNDDLVITDVALEAS 231 Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTN 270 A A+ +G TE ++ ++ + QKN + +++ Sbjct: 232 EGDSYAIALPKGSTELQEELNSILKELIEDGTIDEYVQKNTDLANENAAQ 281 >gi|254705878|ref|ZP_05167706.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella pinnipedialis M163/99/10] gi|261313307|ref|ZP_05952504.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis M163/99/10] gi|261302333|gb|EEY05830.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis M163/99/10] Length = 241 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 83/248 (33%), Gaps = 18/248 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + +I + + ++ ++ F V ++G +G D Sbjct: 1 MLKAIVFAGIASVIAVLPAQA---------REWKEIRIATEGAYPPFNFVASDGSLQGLD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL A+ +K + + L+S + D + + T R+ + F Sbjct: 52 VDIAKALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 106 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + K I+S G ++ Q TT D + ++ Sbjct: 107 KYYSTPLSVAVPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E +A ++ R DA D + + +I +++ A A+ GD + Sbjct: 165 ADEANADLKSGRLDAVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTAVALRLGDDDLR 224 Query: 239 NIVSWTHY 246 + Sbjct: 225 EQFNAAIK 232 >gi|241758845|ref|ZP_04756958.1| L-cystine-binding protein TcyA [Neisseria flavescens SK114] gi|241321053|gb|EER57266.1| L-cystine-binding protein TcyA [Neisseria flavescens SK114] Length = 274 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 69/224 (30%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFFT--------------SFSTNASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L S + + S++ I +G + G Sbjct: 1 MLKKFVLGTIAAVVLAACGGEGSNSASSAPAQSGAASGSLIERINNKGTITVGTEGTYAP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + K+++ L++ + D+++ Sbjct: 61 FTYHDKDGKLTGYDVEVTRAVADKLG---IKVEFKETQWDSMMAGLKAGRFDVVANQVGL 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G ++ K I S+ + G + KA Sbjct: 118 T-SPERQATFDKSEPYSWSGAVLVVRKDSNIKSIDDIKGVKTAQSLTSNYGE------KA 170 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ Sbjct: 171 KAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKNKPD 214 >gi|170696018|ref|ZP_02887156.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170139098|gb|EDT07288.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 260 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 65/248 (26%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ L+ S A IK G + G F +G GFD Sbjct: 1 MKSIRSILLVALLQAVAVSPVFAADEFAQIKSSGVFRIGTEGTYAPFTYHDESGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ ++ I P Q++ L + D + T R+ F Sbjct: 61 VEIGTQIAQRIGVKP---QFVEGKWDGLIAGLDVNRYDAVINEVAVTDARKA--KYDFSD 115 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ I + L G + A + I + Sbjct: 116 PYITSHAALIVRSDNTTIKNFDDLKGKKSANTLTSNFGKI------AASHGAEVIPVQGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD--IISKSPLAPAIIQGDTEW 237 E A R DA D + K + D S A I +G E Sbjct: 170 NESIDLLTAGRVDATVNDSLSFLDFKKHKPNAKVKIATLDTSPESSDKSAVLIRKGSPEL 229 Query: 238 YNIVSWTH 245 ++ Sbjct: 230 VAAINKAL 237 >gi|62317472|ref|YP_223325.1| FliY, amino acid ABC transporter periplasmic amino acid-binding protein [Brucella abortus bv. 1 str. 9-941] gi|83269453|ref|YP_418744.1| glutamate-binding protein [Brucella melitensis biovar Abortus 2308] gi|189022726|ref|YP_001932467.1| Solute-binding protein/glutamate receptor [Brucella abortus S19] gi|237817023|ref|ZP_04596015.1| FliY, amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus str. 2308 A] gi|254690969|ref|ZP_05154223.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 6 str. 870] gi|254698753|ref|ZP_05160581.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 2 str. 86/8/59] gi|254732197|ref|ZP_05190775.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 4 str. 292] gi|256256154|ref|ZP_05461690.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 9 str. C68] gi|260544709|ref|ZP_05820530.1| solute-binding protein/glutamate receptor [Brucella abortus NCTC 8038] gi|260756562|ref|ZP_05868910.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 6 str. 870] gi|260759993|ref|ZP_05872341.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 4 str. 292] gi|260763233|ref|ZP_05875565.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 2 str. 86/8/59] gi|260882380|ref|ZP_05893994.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella abortus bv. 9 str. C68] gi|297249513|ref|ZP_06933214.1| polar amino acid transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] gi|62197665|gb|AAX75964.1| FliY, amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus bv. 1 str. 9-941] gi|82939727|emb|CAJ12724.1| Solute-binding protein/glutamate receptor:Bacterial extracellular solute-binding protein, family 3 [Brucella melitensis biovar Abortus 2308] gi|189021300|gb|ACD74021.1| Solute-binding protein/glutamate receptor [Brucella abortus S19] gi|237787836|gb|EEP62052.1| FliY, amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus str. 2308 A] gi|260097980|gb|EEW81854.1| solute-binding protein/glutamate receptor [Brucella abortus NCTC 8038] gi|260670311|gb|EEX57251.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 4 str. 292] gi|260673654|gb|EEX60475.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 2 str. 86/8/59] gi|260676670|gb|EEX63491.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 6 str. 870] gi|260871908|gb|EEX78977.1| amino acid ABC transporter periplasmic amino acid-binding protein [Brucella abortus bv. 9 str. C68] gi|297173382|gb|EFH32746.1| polar amino acid transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] Length = 257 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 72/246 (29%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ +I + + L IK G LK G F + GFD Sbjct: 1 MKFAQILATAGIIQAVLFTGAMAGENLDAIKSAGVLKIGTEGTYAPFTYHDKDNKLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A++ + P ++ L + + D + T R+ F Sbjct: 61 VEIGEAIAGKLSVKPE---FVEGKWDGLIAGLDANRYDAVINQVGITEERKK--KFNFSN 115 Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + K I + L G Q+ T+ LA A + + Sbjct: 116 PYIVSKVVLIVNDKNDTIKDFADLKGKK-AAQSLTSNYGRLAKEAGAK-----LVATDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ R DA D + + + ++ + + + +GD E Sbjct: 170 DQSIQLVLTGRADATLNDSLSYLDFRKHQPKAPV-KVVAEKDEATASGIIVRKGDDELVA 228 Query: 240 IVSWTH 245 ++ Sbjct: 229 AINKAL 234 >gi|300721605|ref|YP_003710880.1| putative cysteine ABC transporter periplasmic-binding protein [Xenorhabdus nematophila ATCC 19061] gi|297628097|emb|CBJ88648.1| putative cysteine transport protein (ABC superfamily, peri_bind) [Xenorhabdus nematophila ATCC 19061] Length = 257 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 72/247 (29%), Gaps = 13/247 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + L FT + S L I+ G + G F+ A+G GFD Sbjct: 1 MKILLTILLAGISQLSFTHLAYAQSTLDTIQSTGIFRIGTEGAYAPFSYHDASGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R ++ + P ++ L + + D + T RE +F Sbjct: 61 VEVGREIALRMKIKPE---FIEGKWDGLIGGLDAGRSDAVMNQIAITPEREK--RYSFSL 115 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I I + S L G T A A + K + Sbjct: 116 PYVISEAVLITRTDNNDIKTFSDLKGKKSA----HTLTNNFAQM--ARHYKAEIMGTNGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + K ++ D + A + + DTE Sbjct: 170 NQEIELVSTGRADATINDKLSYLDYKKHRPDAPVKIVAADTQAAK-TAVLLRKNDTELKT 228 Query: 240 IVSWTHY 246 V Sbjct: 229 AVDNAIT 235 >gi|116049212|ref|YP_791985.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|115584433|gb|ABJ10448.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] Length = 273 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 80/232 (34%), Gaps = 6/232 (2%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + A L DI + G L+C + A + GFDVD+C L+ A+ Sbjct: 17 CSLAGLVQADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKALDVKA 76 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 ++ +R AL S + D++ +T TL R ++G+ + + + + Sbjct: 77 EIVE---TPFPDRIPALVSGRADVIVASTSDTLERAKTIGM--SIPYFAFVKVVLTREDT 131 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAY 194 GI+S L G + AGT L L KA K ++ + A DA Sbjct: 132 GIASYEDLKGRPVGGTAGTFEALALEKDSKAWGDAKGSFRAYQSEADTALAISQGHIDAT 191 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + + +A + + N ++ Sbjct: 192 VVSSTVAASWIKSGKYKGLKIAGDAPYDIDYVALGAKRNEYGLLNYLNLFIN 243 >gi|257865887|ref|ZP_05645540.1| family 3 extracellular solute-binding protein [Enterococcus casseliflavus EC30] gi|257799821|gb|EEV28873.1| family 3 extracellular solute-binding protein [Enterococcus casseliflavus EC30] Length = 281 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 89/290 (30%), Gaps = 29/290 (10%) Query: 1 MYKDFFVSILCLIILFFTSFST--------------NASILGDIKKRGFLKCGINTGLVG 46 M K F ++ IL + + L IK G L + Sbjct: 1 MKKLFGALVVLTGILVLGACGNGGSSSTGSSSASGSADNQLEAIKAAGVLNVATSADFAP 60 Query: 47 FAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F + G D+D ++ + + + L L+ ALQ + DI Sbjct: 61 FEFHALIDGKDTIVGADIDMVNEIADRLGVE---VNILDLDFNAVLTALQQGKADIAVSG 117 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLA 161 T R F + Q +++K S+ LSG + Q G+ E+ + Sbjct: 118 ISATDER--KQTFDFTDNYFTPEQKLVVNKNNESAFDSIESLSGKKVGAQKGSIQEMIVQ 175 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 D + +V + + D + + + ND + + Sbjct: 176 DQLA----DSQLVSIAKVPNLVNELKQGSIDGLVLESAVAESYVAQNDDLVITDVALEAS 231 Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQVSKDTTN 270 A A+ +G TE ++ ++ + QKN + +++ Sbjct: 232 EGDSYAIALPKGSTELQEELNSILKELIEDGTIDEYVQKNTDLANENAAQ 281 >gi|257461099|ref|ZP_05626197.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257441473|gb|EEV16618.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 269 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 82/204 (40%), Gaps = 13/204 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K IL L++ S + A L +IK G L+ G+ F+++ +G +GF+ Sbjct: 1 MKK----FILSLLVAALASSALCARSLSEIKSSGVLRIGVYDAQPPFSKI-EDGVHQGFE 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + K+++ + A +R LQ ++D + T RE + F Sbjct: 56 VDMANTIAKDMLPSGGKVEFTSVLANQRIKFLQEDKVDAVIATLTVTPEREK--QIDFTT 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + G + + I S+++L +I V +G T E Y+ + Sbjct: 114 PYFSVNIGILTRVEDKIKSLNELQDKTILVLSGGTAETYFE------KQGYNIARCDNAN 167 Query: 181 EIDAAYRAHRCDAYTGDISALYAL 204 A +A + D Y D + A Sbjct: 168 ACYKALKAGQGDGYADDNLVVLAY 191 >gi|156933096|ref|YP_001437012.1| hypothetical protein ESA_00906 [Cronobacter sakazakii ATCC BAA-894] gi|156531350|gb|ABU76176.1| hypothetical protein ESA_00906 [Cronobacter sakazakii ATCC BAA-894] Length = 260 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 89/279 (31%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L + S ++ G + F+ A GD+ GFD Sbjct: 1 MKKKVLAFSLLLGLSTSASVFAALPQ--------TVRIGTDATYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R+ + F Sbjct: 53 IDLGNEMCKRM---QVKCTWVGSDFDSLIPSLKAKKIDAIISSLSITEKRQKEIA--FSD 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I ++ L G + V G+T E + ++ + ++ Sbjct: 108 KLYAADSRLIAAKGATIQPTIESLKGKHVGVLQGSTQEAYANEKWR--GKGVDVVAYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + A R DA D A L ++ + + + D Sbjct: 166 DLIYSDLSAGRLDAALQDEVAASEGFLKQPAGKDYAFAGPSVKDKNYFGDGTGVGLRKED 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E E+ ++++K + +V Sbjct: 226 AELKAAFDKAL------GEIRKDGT-YDKMAKKYFDFNV 257 >gi|237653226|ref|YP_002889540.1| extracellular solute-binding protein family 3 [Thauera sp. MZ1T] gi|237624473|gb|ACR01163.1| extracellular solute-binding protein family 3 [Thauera sp. MZ1T] Length = 263 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 89/259 (34%), Gaps = 28/259 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L +L + + A K ++ F + A+G +GFD Sbjct: 1 MKKY----ALLCAVLALHAGAGFA------KDWNEIRLASEGAYPPFNLIAADGSLQGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + +K ++ AL S++ D + + T R+ + F Sbjct: 51 IDIGNALCEEM---KAKCTWVKQEWDGMIPALVSRKFDAIIASMSITDERKA--KVDFTE 105 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K + + L+G + VQ GT ++ Y+ M I + + Sbjct: 106 KYYASPLALIAKKGSTLRPDLPSLAGKKVGVQRGTVSDNFATKYWDGKGM--QIIRYAKQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS----------KSPLAPA 229 +E RA R DA D Y LT + + + + + + A Sbjct: 164 DEAYLDLRAGRLDAAFSDYLEAYGGFLTKPEGAGYDVAGERLFGKDADEKAVIGEGIGIA 223 Query: 230 IIQGDTEWYNIVSWTHYAM 248 + + D E ++ A+ Sbjct: 224 VRKRDKELTEKLNQALGAI 242 >gi|238793405|ref|ZP_04637030.1| Glutamine-binding periplasmic protein [Yersinia intermedia ATCC 29909] gi|238727178|gb|EEQ18707.1| Glutamine-binding periplasmic protein [Yersinia intermedia ATCC 29909] Length = 247 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 87/251 (34%), Gaps = 22/251 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M VS++ L + F S L +T V F + + + GFD Sbjct: 1 MKSLVKVSLVALTLAFAVSSHAAE---------KELIVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + K P++ ALQ+K +D+ T R+ + F Sbjct: 51 IDLWDAIAKKL---DLKYTLKPMDFSGIIPALQTKNVDLALAGITITDERKK--AVDFSD 105 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ + I + L G + V++GT + DY KA+ F + Sbjct: 106 GYYNSGLLVMVKADNQDIKGEADLKGKVLAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + T + + + I A QG ++ + Sbjct: 162 DNAYLELGTGRADAVLHDTPNILYFIKTAGNG-QFKAVGESIKAQQYGVAFPQG-SDLRD 219 Query: 240 IVSWTHYAMVT 250 V+ ++ Sbjct: 220 KVNVALKSLKE 230 >gi|116670892|ref|YP_831825.1| extracellular solute-binding protein [Arthrobacter sp. FB24] gi|116611001|gb|ABK03725.1| amino acid ABC transporter substrate-binding protein, PAAT family [Arthrobacter sp. FB24] Length = 273 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 73/231 (31%), Gaps = 12/231 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKGFDVDFCRALSSAIFDD 74 S L D+K G LK G F+ + +G+ G+DV+ A++ + Sbjct: 31 GSAPTGGADSSLSDVKSAGELKIGTEGTYKPFSFHAEGSGELTGYDVEIITAVAGKLGVK 90 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 P + F L++K+ D+++ T R+ F + Sbjct: 91 P---SFQETQFDAIFAGLEAKRFDVVANQVSITDERKA--KYEFSEPYTVSTGVIVTKAD 145 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 G S Q+ T+ LA A+ E + + R DA Sbjct: 146 DGSISSFDSLKGKTTAQSLTSNWYKLAQQSGAN-----VEAVEGWAQAVTLLKQGRVDAT 200 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D Y + S+ I + KS A A +G T V+ Sbjct: 201 INDK-LTYLDYQKTAKDSDIKIAAETTDKSLSALAFRKGSTSLTEAVNKAL 250 >gi|320535311|ref|ZP_08035431.1| bacterial extracellular solute-binding protein, family 3 [Treponema phagedenis F0421] gi|320147843|gb|EFW39339.1| bacterial extracellular solute-binding protein, family 3 [Treponema phagedenis F0421] Length = 273 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 92/253 (36%), Gaps = 15/253 (5%) Query: 1 MYKDFFVSILCLIILFF-----TSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F + L +I + NA ++ GF+ G+ L Sbjct: 1 MKKIFTIFFLIFLISSCQKNLKSDEEKNAYTDVSFDKVRVNGFITVGVGDPLPPLISYSL 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 +G G+D+D A + + KI+ ++ E+ L S ++D ++ T RE Sbjct: 61 SGYMVGYDIDLLEAAAKKL---HLKIKVKAISWDEKEAILDSGEVDCIASGLSITPDREE 117 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F D Q + I + L I +Q G+T L ++ + KY Sbjct: 118 IYA--FTQPYLKDAQVIVTLDSAAIFTFDDLVDKCIGIQKGSTAAGLLKEHLEEKAGKYS 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + + ++ A + DA ++ +Y++ L RP + I + ++ A Sbjct: 176 ILELDEFMDLLVALENKKTDAIVVNLLTIYSMILREHRP--YRIFDEPLATDYYAFGFRH 233 Query: 233 GDTEWYNIVSWTH 245 D + ++V Sbjct: 234 KDIKLRDMVQKAL 246 >gi|307130765|ref|YP_003882781.1| arginine-binding periplasmic protein 2 [Dickeya dadantii 3937] gi|306528294|gb|ADM98224.1| Arginine-binding periplasmic protein 2 precursor [Dickeya dadantii 3937] Length = 249 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 76/250 (30%), Gaps = 20/250 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + A+ ++ + F + A GFD Sbjct: 1 MKKLVLAALLAGTAFSTMTLRAMAA--------DTIRFAASATYPPFESLDAGNQIVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + AL+ ++ D + D T R + F Sbjct: 53 IDLANALCKQL---QTTCSFTNQAFDSLIPALKFRRYDAVISGMDITPERSKQVA--FTQ 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K S++ L G I ++ GTT + L D + ++ + Sbjct: 108 PYYANSAIVIAQKG-KFHSLADLKGKRIGMENGTTHQKFLQDKHPE----VKTVPYDSYQ 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + N + + L A+ + Sbjct: 163 NALIDLKNGRLDGVFGDTAVVNEWLKINPDLATVGEKVTDPAYFGIGLGIAVRPDNQALL 222 Query: 239 NIVSWTHYAM 248 ++ A+ Sbjct: 223 EKLNGALNAI 232 >gi|260461454|ref|ZP_05809701.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|259032524|gb|EEW33788.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] Length = 257 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 79/253 (31%), Gaps = 14/253 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I + + + L IK+ G +K G F A+G GFD Sbjct: 1 MKWLKSLIIAGTLQALAVASGHAGANLDQIKQAGVIKVGTEGTYAPFTYHDASGALVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ +A+ + +++L L + D + T R+ F Sbjct: 61 VEIAKAIGDKLGVK---VEFLEGKWDGLIAGLDVNRYDAVINEVGITDARKA--KYDFSD 115 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ I + + L G Q+ T+ LA+ A + + Sbjct: 116 PYIASKAVLIVRGDNTDIKTFADLKGKKSA-QSLTSNFGKLAETNGA-----ELVGTDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ R DA D + K + + + + + +GD E Sbjct: 170 DQSIQLLLTGRADATINDSLSFLDFKKHKPDANVKIAAQE-ENADYSGVIVRKGDPELVA 228 Query: 240 IVSWTHYAMVTAE 252 ++ A + A+ Sbjct: 229 AINKAL-ADIKAD 240 >gi|116513633|ref|YP_812539.1| amino acid ABC transporter periplasmic protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116092948|gb|ABJ58101.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 279 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 79/236 (33%), Gaps = 16/236 (6%) Query: 18 TSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIF 72 ++ + + + +K + G+ + F +GF++D R L+ I Sbjct: 24 SACAVESDNSVRVYNHVKSSKTITWGVKFDMALFGIKSVKTNKLEGFEIDLARLLTKEIL 83 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 K +++ + A+ + L++ +D + T R+ + F + G + Sbjct: 84 GKDGKAKFIEVTAQTKIPQLKNNNLDAVLATMTITDERKK--SVDFSTPYFKAGTSLMTK 141 Query: 133 KKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 I S+ L+ G + V GTT +A A A + Sbjct: 142 TSSPIKSIKDLNHKGRVVIVAKGTTAADDIARLAPKA----TIRQHNDYGACTNALLAGQ 197 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 DA D L + + ++ ++ P A+ +G T+ ++ Sbjct: 198 GDAVATDNGILAGIAKQHK---SLHLVGGTVAVEPYGIAVEKGQTKMLEAINKALK 250 >gi|256784799|ref|ZP_05523230.1| glutamate binding protein [Streptomyces lividans TK24] gi|289768687|ref|ZP_06528065.1| glutamate binding protein [Streptomyces lividans TK24] gi|289698886|gb|EFD66315.1| glutamate binding protein [Streptomyces lividans TK24] Length = 278 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 73/235 (31%), Gaps = 14/235 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 + GI G + +G + GFDVD ++ + +I++ + +R LQ Sbjct: 38 KKITIGIKFDQPGLGQKTPDG-YAGFDVDVATYVAKKLGYTEDQIEWKESKSADRETMLQ 96 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPIT-YFDGQGFIMHKKKGISSVSQLSGASICVQA 152 +D ++ T R S + F I I S L+ A +C Sbjct: 97 RGDVDFIAATYSITPER--SEKVDFAGPYLLAHQDVLIRADDDKIKSPEDLNDAKLCSVT 154 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T+ + D K + + DA T D S L + Sbjct: 155 GSTSAQNVKDKLA---PKAQLQKYPTYSACLNGLQTGAIDALTTDDSILAGYAAQSQFKG 211 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY------AMVTAEELGITQKNI 261 + + ++ + +G ++ ++ A A E N Sbjct: 212 KFKLGGFKMTNENYGIGVKKG-SDLKAKINDALEAMATDGAWDKAVEDNFGPANY 265 >gi|224824430|ref|ZP_03697537.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] gi|224602923|gb|EEG09099.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] Length = 255 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 81/250 (32%), Gaps = 24/250 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L + ++ + + ++ GI+ FA+ A+G +GFD Sbjct: 1 MRKTALSLLLAVSMVPLMAQAE------------TIRFGIDGNYPPFAKQAADGHLEGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +L A+ + + +P AL + + D + + T R+ + F Sbjct: 49 VDIALSLCEAM---KATCEIVPQEWDGLIPALNAGKFDAILSSMQITDERKR--AVDFTN 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + + SG I V +T E D++ + + +V Sbjct: 104 RYYQTPSRMVTKSGVVKVTKDDFSGKRIGVLRASTEERYAKDHWGKKG--VQIVNYGKVT 161 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 E + R D D + L + IS + A+ +G+ Sbjct: 162 EAFLDLKTERLDGVFVDQVVADSEFLKRGGTPAYAFAGPGISDTRYFGYGAGIAVKKGNN 221 Query: 236 EWYNIVSWTH 245 ++ Sbjct: 222 ALRERLNKAI 231 >gi|170781632|ref|YP_001709964.1| putative glutamate/aspartate-binding transport protein [Clavibacter michiganensis subsp. sepedonicus] gi|169156200|emb|CAQ01342.1| putative glutamate/aspartate-binding transport protein [Clavibacter michiganensis subsp. sepedonicus] Length = 330 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 85/256 (33%), Gaps = 9/256 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + + + G +K G F +G GFDV ++S + I + Sbjct: 82 EGTTMARLAAAGEMKVGTKYDQPLFGLAGLDGKPAGFDVAIAALIASKMGIPFDGITFTE 141 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVS 141 + R +Q+ +D + R+ +G F Y GQ ++ I++ Sbjct: 142 TVSANREPFIQNGSVDAVVATYTINDKRKEVVG--FAGPYYVAGQALMVLADDTTINTPE 199 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + G +C AG+T + F A + + + R + A T D L Sbjct: 200 DVRGKQVCSVAGSTPAANIEATFGA-----VVVPTDVYSKCLDPLRNGQVSAVTTDNVIL 254 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY-AMVTAEELGITQKN 260 N+ + V + ++ P I +GD + ++ T A + + Sbjct: 255 SGFIDQNEGEFKLVGGGETFTQEPYGIGIAKGDEAFRTFINDTLQEAYDDGTWARLFEAT 314 Query: 261 INQVSKDTTNPDVQRF 276 V P + R+ Sbjct: 315 AGTVIDTPEPPAIDRY 330 >gi|312962621|ref|ZP_07777111.1| arginine/ornithine periplasmic-binding protein AotJ [Pseudomonas fluorescens WH6] gi|311283201|gb|EFQ61792.1| arginine/ornithine periplasmic-binding protein AotJ [Pseudomonas fluorescens WH6] Length = 261 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 85/266 (31%), Gaps = 25/266 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF-LKCGINTGLVGFAEVKANGDWKGF 59 M K + L L +L + G LK GI FA +G GF Sbjct: 1 MKKLVLLGALALSVLSM-----------QVFAEGKPLKIGIEAAYPPFASKAPDGSIVGF 49 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D D AL + K ++ AL+ ++ID + + T R+ + F Sbjct: 50 DYDIGNALCKQM---DVKCTWVEQEFDGLIPALKVRKIDAILSSMSITEDRKK--SVDFT 104 Query: 120 PITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y +M + +S L G I VQ G+ + + + + Sbjct: 105 NRYYLSPARLVMKEGTTVSDSLDELKGKKIGVQRGSIHDRFAKEVLAPKG--ATVVPYST 162 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQG 233 EI A R D D + L L D + + + + A+ +G Sbjct: 163 QNEIYLDVEAGRLDGTVADATLLQDGFLKTDAGKGYAFVGPSFTDAKYFGDGIGIAVRKG 222 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQK 259 D E + ++ A+ E Q Sbjct: 223 DKENLDRINAAIAAIRANGEYKKIQD 248 >gi|166364039|ref|YP_001656312.1| extracellular solute-binding protein [Microcystis aeruginosa NIES-843] gi|166086412|dbj|BAG01120.1| extracellular solute-binding protein [Microcystis aeruginosa NIES-843] Length = 260 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 78/228 (34%), Gaps = 12/228 (5%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + ++ L I +RG L + L A + + G+ +G ++D + L+ I + I Sbjct: 16 APSFSADLDTIIRRGKLIVAVKNNLPPLAFLDSQGNLQGLEIDIAKRLAEEILGSDTAII 75 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 P++ +ER + ++D T R+ + F P Y D GF+ K Sbjct: 76 LKPVSNQERLQVVIDDRVDFAIARVAITPARQRL--VDFSPFYYLDSSGFVT-KNLLFQR 132 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L+ + I V G+TT + + +E DA+ D S Sbjct: 133 LEDLANSRIAVLNGSTTIALVRSHLPKA----TLRGVASYQEALNLLETGEIDAFAADNS 188 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIVSWTH 245 L + LP + L + + V+ Sbjct: 189 LLTGWVQQFPN---YRQLPIQLGAIALGVVLPKGLQYQSLRERVNQAI 233 >gi|89094513|ref|ZP_01167452.1| probable periplasmic binding protein [Oceanospirillum sp. MED92] gi|89081249|gb|EAR60482.1| probable periplasmic binding protein [Oceanospirillum sp. MED92] Length = 249 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 74/215 (34%), Gaps = 9/215 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ F + A+G+ GFDVD +AL + D + + + L++ Sbjct: 26 KIRIATEGAYAPFNMINADGELAGFDVDIAKALCEEMKAD---CKIVAQDWDGIIPGLKA 82 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 ++ D + + T R ++F Y + F+ K+ + G I Q T Sbjct: 83 RKYDAIIASLSITPERSRV--VSFTDHYYSNSLTFVTGKETS-FDPKMVEGKVIGAQRAT 139 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 L D K +++ + + R DA D Y + + + Sbjct: 140 IAGQYLEDNL---GDKATVKLYDTQDNAYIDLASGRLDAILSDKLPAYDWLQSKEGQAFE 196 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 I +A A+ + D+E + A++ Sbjct: 197 FRGEKIDIDDKIAIAVRKPDSELKEKFNKALKAII 231 >gi|330980617|gb|EGH78720.1| extracellular solute-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 254 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 81/255 (31%), Gaps = 27/255 (10%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 YK + + ++F+ +K GI F A+G GFD Sbjct: 4 YKKILLIAAATLAFSGSAFAE------------KMKMGIEGAYPPFNNKDASGQVVGFDY 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + +AL + + + + + AL + + D L + T R + F Sbjct: 52 EIGQALCAKMKVECEAVT---SDWDGIIPALMASKFDFLISSLSITEER--QQVVDFTNP 106 Query: 122 TYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 Y + FI K I + L+G S+ Q T L D + P + Sbjct: 107 YYSNKLQFIAPKTSSIDVSSIEKAKESLAGKSVGAQRSTLAATWLEDKLE----IMDPKL 162 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ E + R DA D + + + ++ + A+ +GD Sbjct: 163 YDTQENAFLDLSSGRVDAMLADKYVSFEWLKSEAGQNFEFKGEPVVENDKIGIAVRKGDD 222 Query: 236 EWYNIVSWTHYAMVT 250 ++ ++ Sbjct: 223 ALRERLNVALKEIIA 237 >gi|154175116|ref|YP_001407876.1| TcmP [Campylobacter curvus 525.92] gi|112803448|gb|EAU00792.1| TcmP [Campylobacter curvus 525.92] Length = 255 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 47/225 (20%), Positives = 73/225 (32%), Gaps = 20/225 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANG 54 M K F + LFF +A + K K G + F + Sbjct: 1 MKKLF---AFLVAALFFAGCGDSADKSSNAKASAPSSSEQVFKVGASADYPPFEFIDDKN 57 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+D A+ + I + ++ AL++ +ID + T + Sbjct: 58 KITGFDIDLLEAIGNKIGVK---FEVQNISFDGLIPALKTGKIDAIMSAMSATE--DRRK 112 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F Y FI K ++ S + I VQ GT E+ A + Sbjct: 113 SVDFTKPYYSTENLFIRKKGSDVND-SNIGSKQIGVQLGTVQEIAARAITGAK-----VV 166 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 E + A +A + D D S Y N E + LPD Sbjct: 167 PAEAIGSSILALKAGKIDIVLVDSSIGYGYLKQNPDLEEFLKLPD 211 >gi|291557062|emb|CBL34179.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Eubacterium siraeum V10Sc8a] Length = 294 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 58/304 (19%), Positives = 111/304 (36%), Gaps = 35/304 (11%) Query: 1 MYKDFFVSILCLIIL------FFTSFSTNAS--------------ILGDIKKRGFLKCGI 40 M K F ++ L + FT+ TNA+ L +IK G + G+ Sbjct: 1 MKKLNFKKLIALGLTAAAAVASFTACGTNATSGGSDGNTGSKVYRTLDEIKASGKINIGV 60 Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 + F V NG+++G+D+ F L + + I Y+ A R L++ ++DI+ Sbjct: 61 FSDKNPFGYVDENGEYQGYDIYFANRLGKDLGVE---INYVSTEAANRVEYLETGKVDII 117 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGTTTELT 159 N T R + F G + I+S+ + + + V +GTT EL Sbjct: 118 LANFTVTEERAE--KVDFALPYMNVALGVVSPDSNVITSLDNWKAEDRMIVISGTTAELY 175 Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 L + ++ +A A+ D + + A V + Sbjct: 176 LT----KNYPDIKLQKYDSYATAKSAIENGNGVAWANDNTEVIAFAKQ--NKGYTVGIDS 229 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279 + S+ +APA+ +G+ N ++ + + + + DT D + L + Sbjct: 230 LGSQDTIAPAVTKGNETLLNWINDEIKTL---GKENFFHADYDATLTDTYGADYKETLVV 286 Query: 280 DKSS 283 + Sbjct: 287 EGGE 290 >gi|119873347|ref|YP_931354.1| extracellular solute-binding protein [Pyrobaculum islandicum DSM 4184] gi|119674755|gb|ABL89011.1| extracellular solute-binding protein, family 3 [Pyrobaculum islandicum DSM 4184] Length = 292 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 81/236 (34%), Gaps = 9/236 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + IKKRG L G + + V + G+D+D R ++ A+ +++ Sbjct: 52 AACPVSVDVIKKRGKLIVGTDATWPPWEWVMGD-KIVGWDIDIAREIAKALG---VQLEI 107 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISS 139 + A++ +D+ WT RE L F Y + + + I+ Sbjct: 108 RDMRFAGLLEAVRKGDVDLAISAITWTSEREKV--LEFSMPYYLESIVVVTKASRTDINK 165 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V L G ++ VQ GTT E A + + + + DA D S Sbjct: 166 VEDLYGKTVGVQIGTTHEEWAATNLEKPGKATVRRYDKVYPYMVEVLKRGDVDAIILDRS 225 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 AL LP ++ A+ + + +V ++ +L Sbjct: 226 IATALVRKFPDLKIAFELPGSAG--YISVAMPKCAQDLKLVVDQVIENLMQTGKLD 279 >gi|145224550|ref|YP_001135228.1| extracellular solute-binding protein [Mycobacterium gilvum PYR-GCK] gi|315444881|ref|YP_004077760.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] gi|145217036|gb|ABP46440.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium gilvum PYR-GCK] gi|315263184|gb|ADT99925.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] Length = 279 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 81/244 (33%), Gaps = 16/244 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G G + +G GFDVD ++ + P KI++ + +R +Q+ Sbjct: 43 TIVIGTKFDQPGLGQKNPDGTMSGFDVDVATYVAGELGYAPDKIEWKESPSAQRETLIQN 102 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASI-CVQA 152 Q+ ++ T R+ +AF GQ ++ I+ + L I C + Sbjct: 103 GQVTFIAATYSITDSRKE--KVAFAGPYLITGQSLLVRNDNNDITGAASLENNKILCSVS 160 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T + D + ++ A + DA T D L + P Sbjct: 161 GSTPAQKIKDEY----QGVQLQQYDTYSACIDALKNGAVDAVTTDEVILAGYAAQS--PG 214 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY------AMVTAEELGITQKNINQVSK 266 I+ + S+ + + D E ++ A A + + I + Sbjct: 215 TFKIVGEPFSEERYGIGLKKDDAELRTKINDALKKMEDSGAWKEAFDKNLGPAGITAPAP 274 Query: 267 DTTN 270 + Sbjct: 275 PPLD 278 >gi|329766948|ref|ZP_08258476.1| hypothetical protein HMPREF0428_00173 [Gemella haemolysans M341] gi|328837673|gb|EGF87298.1| hypothetical protein HMPREF0428_00173 [Gemella haemolysans M341] Length = 277 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 44/284 (15%), Positives = 93/284 (32%), Gaps = 16/284 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M + + L + +L + ++ D +K + G + V +G Sbjct: 1 MKRFKLLITLLISVLIISGCASGGKDKPKKDNWEDFQKDKKVVIGFDNTFVPMGFQDKSG 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+D ++ K+++ +N + L++ ID++ T RE + Sbjct: 61 KNVGFDIDLANSVFEKYG---IKVEWQAINWDLKETELKNGNIDLIWNGYSKTKERESVV 117 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KY 171 F + Q ++ K K I ++S+L + Q G++ T + + Sbjct: 118 R--FTKQYMINEQVVVVKKSKKIKTISELKDRVLGAQNGSSGYDTFNEKPEVLKNIVKNN 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 +E E R D D ++ + IL A Sbjct: 176 DATQYESFNEALIDLENDRIDVLLIDKVYANYYLKQQNKLRDFDILNAGFDSEAFAVGAR 235 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 + D N V+ + EE + + +D ++++ Sbjct: 236 KADVTLINKVNEAFNKLY--EEGKFQEISNKWFGEDVATDEIKK 277 >gi|188533489|ref|YP_001907286.1| ABC lysine/arginine/ornithine transporter, periplasmic ligand binding protein [Erwinia tasmaniensis Et1/99] gi|188028531|emb|CAO96393.1| ABC lysine/arginine/ornithine transporter, periplasmic ligand binding protein [Erwinia tasmaniensis Et1/99] Length = 264 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 88/252 (34%), Gaps = 22/252 (8%) Query: 1 MYKDFFVS---ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K+ + + L ++ S + A I++ ++ ++ F G+ Sbjct: 1 MKKNTLATFCKLAALALMAGWSLAAQA----KIEQ---VRFAVDPTYPPFESKTPKGELI 53 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D AL + + +K ++ AL++++ D + + T R + Sbjct: 54 GFDIDLGNALCTQM---QAKCVWVESQFDGMIPALKARKFDAILSDMGITEERLKQINFT 110 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 P+ Q + + + L G ++ VQ GT E ++ H + + + Sbjct: 111 -VPLYDTHTQLIAHKGSGLLPTAASLKGKNVGVQQGTVQERYALAKWQPHG--VNVVAYG 167 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQ 232 ++ + R D D + L L I + P+ A + + Sbjct: 168 DQALVENDLVSGRLDVVFTDAAQAAIGFLKRPEGQGF-ELAGPIVEDPIIGPGTAIGLRK 226 Query: 233 GDTEWYNIVSWT 244 GD E + + Sbjct: 227 GDDELKSALDNA 238 >gi|134278785|ref|ZP_01765499.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia pseudomallei 305] gi|134250569|gb|EBA50649.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia pseudomallei 305] Length = 273 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 33/239 (13%), Positives = 78/239 (32%), Gaps = 11/239 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + + + L + +A L I K G ++ G+ F + + +G+D+D Sbjct: 21 LLLASVAGLSLFAPQAHADALDTIAKSGIVRIGVFEDYPPFGSIGPDMKPQGYDIDVASL 80 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + A+ +K++ + + R L + D+L E + + F Sbjct: 81 IGKAL---NAKVELVQVTGDNRMAYLADHKTDML---LSVGETPERAKVIDFSQPYAPYY 134 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 K + + L+G ++ V GT +L+++ A F+ +A+ Sbjct: 135 LAVFGPKSLAVKNAGDLAGKTVAVARGTLEDLSVSKVAPA---SAVIKRFDDPNGAISAF 191 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + + P+ + SP + + + V+ Sbjct: 192 LSGQAQLLVVGNDVGATIMAR--HPANDPEQKFSLFSSPDHVGLNKNEPRLKQKVNEAI 248 >gi|15807633|ref|NP_294751.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Deinococcus radiodurans R1] Length = 250 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 82/238 (34%), Gaps = 13/238 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + + ++KK G L + F + AN GFD+D A++ + K+ Sbjct: 17 TAHAQSGCFANVKKNG-LTVVTSPDYPPFETLDANNKVVGFDMDLLNAVAKHMATHGVKV 75 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-I 137 + + +L +K+ D+++ T R+ + F ++ K I Sbjct: 76 NLVTQSFDGLVPSLLAKKADLIAAGMTVTEERKK--SVLFSVPYISGPNAIVIRKDTPGI 133 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S +S LSG ++ VQ GT E + D A F + A + + A Sbjct: 134 SKLSDLSGKTVAVQLGTAQEKLVGDVKGA-----SVKSFNLYTDAAMAVQTRQAQAMVLH 188 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L + + + A+ + + N V+ + + E+ Sbjct: 189 KVVANSFVKVYPDLKIAGTLGSLNT----SFAMRKDCGDLQNRVNAALIQVRKSGEMD 242 >gi|33592910|ref|NP_880554.1| putative glutamine-binding periplasmic protein precursor [Bordetella pertussis Tohama I] gi|33572558|emb|CAE42138.1| putative glutamine-binding periplasmic protein precursor [Bordetella pertussis Tohama I] Length = 247 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 81/229 (35%), Gaps = 21/229 (9%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + + +A ++ + V +G GFD++ AL+ A+ Sbjct: 19 GAGAAHAQE--------TIRAVTDATFPPMEFV-KDGKRTGFDIELVEALAQAMGKK--- 66 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I+++ ++ K ALQ+ + DI T R+ + F Y G + K + Sbjct: 67 IEWIDIDFKGLIPALQAGRADIAVSAIYITAERQKV--VDFTDPYYAGGLVVLTKKDGPV 124 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S+ L G + VQ GT + L ++F + E+ +E+ + R DA Sbjct: 125 KSLKDLEGRKVSVQVGTKSVNYLKEHFPK----VQRVEVEKNQEMFNLVQIGRADAAVTG 180 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 A + +L + I+ A+ + + ++ Sbjct: 181 KPAAKLFAQSTQN---LAVLSEQITTEEYGIAVPKSKSGLTRELNEALK 226 >gi|323490819|ref|ZP_08096020.1| ABC transporter (substrate-binding protein) [Planococcus donghaensis MPA1U2] gi|323395531|gb|EGA88376.1| ABC transporter (substrate-binding protein) [Planococcus donghaensis MPA1U2] Length = 259 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 92/258 (35%), Gaps = 13/258 (5%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKG 58 M K F+++ L + +++ ++ L+ G + F GD G Sbjct: 1 MIKKLSFITLFASSALVLGACGSSSEEETGSSEKKEVLEMGTSAEFAPFESRNTEGDIVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D ++ + + ++ + ALQ+ ++D++ T R+ + F Sbjct: 61 FDIDLANHIADELGYE---LEITDMKFDGLIGALQNDRVDMVIAGMSATDSRKE--NVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G+ F+ K G++S+ L G ++ VQ GT E + + + Sbjct: 116 STEYNHSGEMFVTAKDSGLTSLESLEGKTVGVQLGTIQEEGAKSIIADEGINFELKALDD 175 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEW 237 + + R DA D + D + SP +A A +G +E Sbjct: 176 SGALIQEILSGRIDAAYIDKQVALGYI----EAQDLSAFDDPTTASPGMAVAFPKG-SEL 230 Query: 238 YNIVSWTHYAMVTAEELG 255 V+ M + +L Sbjct: 231 LEDVNGVLAEMEESGKLD 248 >gi|227877752|ref|ZP_03995786.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus crispatus JV-V01] gi|256850081|ref|ZP_05555511.1| glutamine ABC transporter substrate-binding protein [Lactobacillus crispatus MV-1A-US] gi|262047369|ref|ZP_06020326.1| glutamine ABC transporter substrate-binding protein [Lactobacillus crispatus MV-3A-US] gi|227862655|gb|EEJ70140.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus crispatus JV-V01] gi|256713053|gb|EEU28044.1| glutamine ABC transporter substrate-binding protein [Lactobacillus crispatus MV-1A-US] gi|260572343|gb|EEX28906.1| glutamine ABC transporter substrate-binding protein [Lactobacillus crispatus MV-3A-US] Length = 290 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 107/297 (36%), Gaps = 41/297 (13%) Query: 2 YKDF--FVSILCLIILFFTS----------FSTNASIL------GDIKKRGFLKCGINTG 43 K F ++IL ++++ + + IK+RG+L+ + Sbjct: 5 KKIFNWIMAILFVVVVLVAGYIGISRPGINGTASGDRWNSENNVSSIKRRGYLRIAVFGD 64 Query: 44 LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 L + V + G G+DV R ++ + P +++ +NA R L S + DI+ N Sbjct: 65 LPPYGWVNSQGKRVGYDVRLARRVAKDLGVKP---KFIQVNANNRIDTLNSNKADIVLAN 121 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ ++ G I K +++ QL G S+ V GTT E Sbjct: 122 FTLTPERKSV--ASWTKPYMKVSVGVISPKSAPVTNAKQLKGKSVIVTKGTTAENYFT-- 177 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + + F+ + A + R A D S LYA P V + I Sbjct: 178 ---KQKGVNLLKFDSKTQQFNAIKNGRGAALADDNSYLYAWVKR--NPKFTVGIKTIGPN 232 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGID 280 ++ A+ +G+ + IT+ N N +++ + G + Sbjct: 233 QYISGAVKKGNKSLQKWMDR-----------EITKLNRESFFTYDYNKELKPYFGKE 278 >gi|218886666|ref|YP_002435987.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757620|gb|ACL08519.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 249 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 70/206 (33%), Gaps = 9/206 (4%) Query: 39 GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98 GI+ FA V +G GFDV+ ++ + K+ + P++ L +K+ID Sbjct: 30 GIDANYPPFAYVDKSGKPAGFDVESMDWIAKKMG---FKVTHQPMDWDGIIPNLLAKKID 86 Query: 99 ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTE 157 ++ T R + F + Q FI K +++ L G + VQ GT+ Sbjct: 87 MVCSGMSITEER--RQKVNFSNPYWNVKQVFIAKKGSTLNTDQILKGKVKLGVQRGTSEA 144 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 L +A Y ++ R DA T D ++ Sbjct: 145 EALQKDKEAKGYGYDLRFYDSAPLAIEDVLNGRIDAATMDNLPADDAAAKG---KAIQVV 201 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSW 243 A + D E +++ Sbjct: 202 GVYGDSEDFGVATRKEDAELLKMIND 227 >gi|330862548|emb|CBX72703.1| hypothetical protein YEW_JG40510 [Yersinia enterocolitica W22703] Length = 193 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 71/166 (42%), Gaps = 6/166 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L +++ + + A L I++RG L+ + F V + +G+D Sbjct: 3 MKKRML-ALLGAVLILVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ + K+Q +P+ + R LQ+ ++D++ + RE +AF Sbjct: 62 IDMAHYLADKM---KLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNPEREK--AIAFSR 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 G K+ + QL+G ++ V G ++ L++ Sbjct: 117 AYAPFFLGVFGAKEDALKQPEQLAGKTVGVTRGAVEDMVLSELAPK 162 >gi|310766632|gb|ADP11582.1| Putative amino-acid ABC transporter, periplasmic amino acid-binding protein [Erwinia sp. Ejp617] Length = 257 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 36/246 (14%), Positives = 72/246 (29%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + ++ F+S + + L ++ G LK G F+ +G GFD Sbjct: 1 MKSIATLLLAGMVQFGFSSQAMAETDLAKVQSAGTLKIGTEGTYPPFSYHDTSGKLIGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R ++ + ++ L +++ D + T R F Sbjct: 61 VEIGREVAKRLNVKAE---FVEAKWDGLIAGLDARRYDAVINQVAITAPR--QQKYDFSV 115 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ I S L G T+ LA + A + + Sbjct: 116 PYISSRAVLIVRSNNSAIKSFDDLKGKKSA-HTLTSNFAQLATRYGA-----QVVGTDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R DA D + K + I + + + + + E Sbjct: 170 NQSVDLVASGRADATINDNLSYLDFKKHRPD-VKVKIAATLPAAEDEGILLRKDNPELKA 228 Query: 240 IVSWTH 245 + Sbjct: 229 AIDKAI 234 >gi|148273187|ref|YP_001222748.1| putative glutamate ABC transporter substrate-binding protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831117|emb|CAN02069.1| putative glutamate ABC transporter, substrate-binding protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 307 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 84/256 (32%), Gaps = 9/256 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + + + G +K G F +G GFDV ++S + I++ Sbjct: 59 EGTTMARLAAAGEMKVGTKYDQPLFGLAGLDGKPAGFDVAIAALVASKMGIPFDSIKFTE 118 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVS 141 + R +Q+ +D + R+ + F Y GQ ++ I++ Sbjct: 119 TVSANREPFIQNGSVDAVVATYTINDKRKEV--VDFAGPYYVAGQALMVLADDTTINTPE 176 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + G +C AG+T + F A + + + R + A T D L Sbjct: 177 DVRGKQVCSVAGSTPAANIEATFGA-----VVVPTDVYSKCLDPLRNGQVSAVTTDNVIL 231 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY-AMVTAEELGITQKN 260 N+ + V + ++ P I + D + ++ T A + + Sbjct: 232 SGFIDQNEGEFKLVGDGETFTQEPYGIGIAKDDEAFRTFINDTLQEAYDDGTWARLFEAT 291 Query: 261 INQVSKDTTNPDVQRF 276 V P + R+ Sbjct: 292 AGTVIDTPEPPAIDRY 307 >gi|239944758|ref|ZP_04696695.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces roseosporus NRRL 15998] gi|239991223|ref|ZP_04711887.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces roseosporus NRRL 11379] Length = 307 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 76/232 (32%), Gaps = 10/232 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74 T ++ + K+RG L G + + GFD++ + +++ + Sbjct: 51 AATGVDLDSPVFKKAKERGKLVIGAKADQPYLGFEDQSTKERSGFDIELAKMVAADLGFS 110 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +I++ +++ R A+ Q+D R+ +G F Y G ++ K Sbjct: 111 EKQIEWKTVDSGVRETAISKGQVDYYVGTYTINDERKKQVG--FAGPYYKAGADLLVRKD 168 Query: 135 -KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I+ + G +C G+T + + + + + DA Sbjct: 169 ETAITGKESVKGKKVCSIVGSTPLQEIKKPE----YGASVVELAKYSDCVQQLLTKQVDA 224 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 T D S L + ++ + P + + D +S + Sbjct: 225 VTTDDSILKGYAAA--NKGKLKVVGKPFTDEPYGIGLNKDDKVLREAISKSL 274 >gi|167748299|ref|ZP_02420426.1| hypothetical protein ANACAC_03043 [Anaerostipes caccae DSM 14662] gi|167652291|gb|EDR96420.1| hypothetical protein ANACAC_03043 [Anaerostipes caccae DSM 14662] Length = 259 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 83/255 (32%), Gaps = 15/255 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V++ ++ + I + + G N F V N GFD Sbjct: 1 MRKILTVALAGVLAATMLFAGCSKKEEAAIPE--KIIVGTNAEFPPFEYVDDNKKIDGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + + ++ + KI+ + K +L+SK I+ ++ T E + F Sbjct: 59 IAMMKEIAKRM---DVKIEIKNMEFKSLIGSLESKTINAVAAGM--TKDPERMEAVDFSD 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIV 175 Y Q I+ K + +++L G + VQ GTT + + K Sbjct: 114 SYYTSSQVMIVKKDSKLKKMTELKGKKVGVQEGTTGDKLATGENFGEKQKPVVKGVDVRR 173 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F + + DA D I+ D ++ A+ +G+ Sbjct: 174 FPKGVNAVMDLKNGGVDAVVIDEKPAMEF---VKNNKGLKIVRDKAAEEYYCIALPKGNE 230 Query: 236 EWYNIVSWTHYAMVT 250 + ++ AM Sbjct: 231 KLVKEINKQLKAMKE 245 >gi|171185713|ref|YP_001794632.1| extracellular solute-binding protein [Thermoproteus neutrophilus V24Sta] gi|170934925|gb|ACB40186.1| extracellular solute-binding protein family 3 [Thermoproteus neutrophilus V24Sta] Length = 295 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 80/236 (33%), Gaps = 9/236 (3%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + IKKRG L G + + V + G+D+D R ++ A+ +++ Sbjct: 55 AACPVSVDVIKKRGKLIVGTDATWPPWEWVMGD-KIVGWDIDIAREIAKALG---VQLEI 110 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISS 139 + A++ +D+ WT RE L F Y + + + I+ Sbjct: 111 RDMRFAGLLEAVRKGDVDLAISAITWTSEREKV--LEFSMPYYRESIVVVTKASRTDINK 168 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V L G ++ VQ GTT E A + + + + DA D S Sbjct: 169 VEDLYGKTVGVQIGTTHEEWAAANLEKPGKATVRRYDKVYPYMVEVLKRGDVDAIILDRS 228 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 AL +P ++ A+ + + +V + +L Sbjct: 229 IATALVKKFPDLKIAFEIPGSAG--YISVAMPKCAQDLKLVVDQVIENLTQTGKLD 282 >gi|50119207|ref|YP_048374.1| putative cystine-binding periplasmic protein [Pectobacterium atrosepticum SCRI1043] gi|49609733|emb|CAG73167.1| putative cystine-binding periplasmic protein [Pectobacterium atrosepticum SCRI1043] Length = 255 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 71/246 (28%), Gaps = 15/246 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F L L TS +A L IK G +K G + +G GFD Sbjct: 1 MKKIRF--ALLTSALLATSVFAHADDLSAIKSAGVIKFGTEGTYAPYTYHDKSGQLVGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RA++ + I+ + +K+ D + T R + F Sbjct: 59 VDVGRAVAEKLGVKAQFIEGR---WDGLIAGIDAKRYDAVINQVGVTKER--QVKYDFSK 113 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ I S L G Q+ T+ A + A + + Sbjct: 114 PYIDSKAVLVVRGDNAAIKDFSDLKGKKSA-QSLTSNYSKQATSYGA-----EIVPTDGF 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R DA D + K I P A + + Sbjct: 168 NQSLDLVLSGRADATLNDNLSFLDFKKHKPDA-NVKIAATSKDGEPSAILVRKDQAPLVE 226 Query: 240 IVSWTH 245 ++ Sbjct: 227 ALNKAL 232 >gi|298290179|ref|YP_003692118.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296926690|gb|ADH87499.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 270 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 74/226 (32%), Gaps = 6/226 (2%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 A L DI G L+C + A+ + GFDVD+C L+ + ++ Sbjct: 20 PAQADKLDDIIASGTLRCAVVLDFPPMGSRDASNNPIGFDVDYCNDLAKVLGVKAEIVE- 78 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +R AL S ++D+ +T TL R + G F + + GI Sbjct: 79 --TPFPDRIPALVSGRVDVGVASTSDTLERAKTAG--FTIPYFAFKMVVLTKDGLGIKDY 134 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G +GT L L KA ++ ++ A + +A + Sbjct: 135 DSLKGKKTGSVSGTFEALALEKDVKAWGTG-SFRGYQTQADVFLALAQGQIEATVVTSTV 193 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 A+ + +A ++ + N ++ Sbjct: 194 AAAIVKEGKYKGLMMGGDAPYDIDYVALIALRNEQGLINYLNLFIN 239 >gi|254695678|ref|ZP_05157506.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella abortus bv. 3 str. Tulya] gi|261216080|ref|ZP_05930361.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 3 str. Tulya] gi|260917687|gb|EEX84548.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 3 str. Tulya] Length = 253 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 83/248 (33%), Gaps = 18/248 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + +I + + ++ ++ F V ++G +G D Sbjct: 1 MLKAIVFAGIASVIAVLPAQA---------REWKEIRIATEGAYPPFNFVASDGSLQGLD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL A+ +K + + L+S + D + + T R+ + F Sbjct: 52 VDIAKALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 106 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + K I+S G ++ Q TT D + ++ Sbjct: 107 KYYSTPLSVALPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E +A ++ R DA D + + +I +++ A A+ GD + Sbjct: 165 ADEANADLKSGRLDAVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTAVALRLGDDDLR 224 Query: 239 NIVSWTHY 246 + Sbjct: 225 EQFNAAIK 232 >gi|77404680|ref|YP_345254.1| ABC amino acid transporter, periplasmic ligand binding protein [Rhodobacter sphaeroides 2.4.1] gi|77390330|gb|ABA81513.1| ABC amino acid transporter, periplasmic ligand binding protein [Rhodobacter sphaeroides 2.4.1] Length = 280 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 87/248 (35%), Gaps = 12/248 (4%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I+K G ++ G+ F +G +G +V+ R + F + + ++ Sbjct: 35 EAIQKAGKIRIGVKCDSPPFGASGPDGKPRGIEVEMARKIGDYAFGSEEGAELSCVTSEA 94 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R +L + ++D++ T R + + I ++ ++ + +S L G S Sbjct: 95 RISSLNAGKLDLIIATLGRTAAR--QEVIDYSNIYFWGTSNVLVPADSPVQKLSDLQGRS 152 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + V G T L A+ + + A R D + GD +Y L Sbjct: 153 VLVVKGATQIKWLE----ANIPDISIVQLNTTADGVQALMQGRADGFVGDGGLIYTLGGN 208 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + ++ + + + +G+TE V+ + + I Q ++ Sbjct: 209 YPK---LRVIEEGLDLGVNGVGMRKGETELQTFVNAVLDELRKGDFYETV---IPQFVEE 262 Query: 268 TTNPDVQR 275 DV + Sbjct: 263 PAVVDVMK 270 >gi|323702152|ref|ZP_08113819.1| extracellular solute-binding protein family 3 [Desulfotomaculum nigrificans DSM 574] gi|323532839|gb|EGB22711.1| extracellular solute-binding protein family 3 [Desulfotomaculum nigrificans DSM 574] Length = 269 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 72/213 (33%), Gaps = 12/213 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G + F V NG GFDVD AL + + + +N ALQ+ Sbjct: 45 KLVVGSDAAFAPFEFV-ENGKPTGFDVDLITALCEEAGYE---LDFRNMNFDGLIPALQT 100 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAG 153 QID+ R + F Y G + K I L G I VQ+G Sbjct: 101 GQIDVAVSGMSINEER--KQVVNFTDPYYKSGLIVAVQAKNNDIKGFDDLKGKKIAVQSG 158 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT A + K + F +++ + DA D L + ++ Sbjct: 159 TTG----AKMAEKVTTKDKIVYFSNSDQVLLDLKNGSVDAVINDYPVLKYFMDKVAK-ND 213 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 ++ + ++ A+ + TE ++ Sbjct: 214 VKLVGEKLTSEDYGIAVPKNKTEVLEKLNAALK 246 >gi|300933043|ref|ZP_07148299.1| glutamate ABC transport system, solute-binding protein [Corynebacterium resistens DSM 45100] Length = 293 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 42/290 (14%), Positives = 88/290 (30%), Gaps = 23/290 (7%) Query: 1 MYK---DFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K + + + + S S L + K G + G G Sbjct: 1 MRKPSLAMRIVAAVMTLFSVAALSACGSNEARTLLESIKSGHVILGTKYDQPGLGVRTPA 60 Query: 54 GDWKGFDVDFCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 +++G D D R ++ K+ + + +R +++ ++D+++ Sbjct: 61 KEYEGVDTDVSRYVVKYIAEKNGWAMPKMTWRETPSAQRETLIKNGEVDMIAATYSINKG 120 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHN 168 R + F Q ++ K I +S + +G +C G+T + Sbjct: 121 R--YKSVDFGGPYLQTHQAILVRKDDPIQGLSDMGAGTKVCSVTGSTPAQKIKKALPE-- 176 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII----SKS 224 F+ A + DA + D + L V L + Sbjct: 177 --VQLQEFDTYSACVEALARGKVDALSTDATILAGFAEQYPGTMRVVELKKDDGSYWTNE 234 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQKNINQVSKDTTNPDV 273 + +G + ++ M + E I +KN+ K P + Sbjct: 235 NYGIGLAKGQPDAVKAINDALNEMHDSGEYERIIKKNLGDAIKPGDKPKI 284 >gi|210611518|ref|ZP_03288938.1| hypothetical protein CLONEX_01128 [Clostridium nexile DSM 1787] gi|319936515|ref|ZP_08010930.1| extracellular solute-binding protein family 3 [Coprobacillus sp. 29_1] gi|210151965|gb|EEA82972.1| hypothetical protein CLONEX_01128 [Clostridium nexile DSM 1787] gi|319808407|gb|EFW04962.1| extracellular solute-binding protein family 3 [Coprobacillus sp. 29_1] Length = 290 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 91/219 (41%), Gaps = 12/219 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + +IKK G + G+ + F V NG+++G+D+ F L + I Y+ A Sbjct: 42 TVDEIKKSGTINIGVFSDKAPFGYVDENGEYQGYDIYFAERLGKDLGVK---INYVSTEA 98 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-S 144 R LQ+ ++D++ N T R + F G + HK+ I+ +SQ+ + Sbjct: 99 ANRIEYLQTGKVDVILANFTVTDERAE--EVDFALPYMNVSLGVVSHKEHVITDLSQVGA 156 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 + V +GTT E L + F+ +A+ A+ D + + A Sbjct: 157 DEQVIVISGTTAETYLT----KNYPDIKLQKFDTYAAAKSAFENGTGVAWANDNTEVIAF 212 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + + + + S +APA+ +G+T + ++ Sbjct: 213 A--KENEGYTIGIDSLGSSDTIAPAVTKGNTSLLDWLNE 249 >gi|254699861|ref|ZP_05161689.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella suis bv. 5 str. 513] gi|261750335|ref|ZP_05994044.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5 str. 513] gi|261740088|gb|EEY28014.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5 str. 513] Length = 253 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 84/248 (33%), Gaps = 18/248 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M KD + + +I + + ++ ++ F V ++G +G D Sbjct: 1 MLKDIVFAGIASVIAVLPAQA---------REWKEIRIATEGAYPPFNFVASDGSLQGLD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL A+ +K + + L+S + D + + T R+ + F Sbjct: 52 VDIAKALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 106 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + K I+S G ++ Q TT D + ++ Sbjct: 107 KYYSTPLSVAVPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E +A ++ R DA D + + +I +++ A A+ GD + Sbjct: 165 ADEANADLKSGRLDAVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTAVALRLGDDDLR 224 Query: 239 NIVSWTHY 246 + Sbjct: 225 EQFNAAIK 232 >gi|227824560|ref|ZP_03989392.1| periplasmic glutamine-binding protein [Acidaminococcus sp. D21] gi|226905059|gb|EEH90977.1| periplasmic glutamine-binding protein [Acidaminococcus sp. D21] Length = 265 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 77/261 (29%), Gaps = 16/261 (6%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIK---KRGFLKCGINTGLVGFAEV-KANGD 55 M K + +L +IL NA+ ++ L G F + Sbjct: 4 MKKSLKMMCLLAALILGVAGCGGNAAKDDKKAAAPQKKELVVGTAPSFAPFEFPSEEADK 63 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD++ A+ + + + + A+ + ID++ T R+ Sbjct: 64 PTGFDMELIEAIGKKMGYEK--VTIKGMGFDALIPAMNAGNIDVIISGMSITDARKK--Q 119 Query: 116 LAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F Y G I+ K I S L G I VQ GTT A Sbjct: 120 VLFTDPYYESGLMVIVKKDNNEIKSFDDLKGKRIGVQLGTTGAQEAEKIEGAK-----VT 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F+ + + DA D+ L L S + A + Sbjct: 175 NFDTSDLACIELKNGNVDAVISDLPVLQ-YFLKQKGSSYAKAVGTPKKGDFYGIAAPKDK 233 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + + ++ + + E Sbjct: 234 KDLVDGMNKALKELKDSGEYK 254 >gi|152989478|ref|YP_001349970.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa PA7] gi|150964636|gb|ABR86661.1| arginine/ornithine binding protein AotJ [Pseudomonas aeruginosa PA7] Length = 259 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 87/254 (34%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L +L +F+ + ++ GI F+ +G GFD Sbjct: 1 MKKLALLGALALSVLSLPTFAADKP----------VRIGIEAAYPPFSLKTPDGQLAGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + +++ AL+ ++ID + + T R+ + F Sbjct: 51 VDIGNALCEEM---KVQCKWVEQEFDGLIPALKVRKIDAILSSMTITDERKR--SVDFTN 105 Query: 121 ITYFDGQGFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y F+M + ++ L G V G+T + + + + Sbjct: 106 KYYNTPARFVMKEGASLNDPKADLKGRKAGVLRGSTADRYASGELTPAG--VEVVRYNSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +E + A R DA D L L D + + ++ A+ +GD Sbjct: 164 QEANMDLVAGRLDAVVADSVNLEDGFLKTDAGKGYAFVGPQLNDVKYFGEGVGIAVRKGD 223 Query: 235 TEWYNIVSWTHYAM 248 +E + A+ Sbjct: 224 SELAGKFNAAIDAL 237 >gi|119717234|ref|YP_924199.1| extracellular solute-binding protein [Nocardioides sp. JS614] gi|119537895|gb|ABL82512.1| amino acid ABC transporter substrate-binding protein, PAAT family [Nocardioides sp. JS614] Length = 294 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 52/229 (22%), Positives = 87/229 (37%), Gaps = 10/229 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD--WKGFDVDFCRALSSAIFDDPS 76 + S+ A L I G L + F + GFDVD A++ + + Sbjct: 53 TGSSEAPSLNLISD-GTLTVCSDVPYPPFENFDKTTPTGFAGFDVDIVNAIAEQLDLE-V 110 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 +I+ NA + LAL S Q D+ + T RE +G F Y Q ++ Sbjct: 111 QIKDSDFNALQSGLALNSGQCDMAASAMTITPEREQKIG--FSDGYYDSEQSLLVPSDSS 168 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+ + L G + VQ GTT E + + +VF E+ AA +A + DA Sbjct: 169 IAGIGDLDGVKVGVQKGTTGEAYANE----NASGADIVVFPSDGEMYAAIKAGQVDALLQ 224 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D+ + P E ++ + A+ + +T + V+ Sbjct: 225 DLPVNLDHQNDPKAPGEFKVVEKYDTGESYGLAMKKDNTGLIDAVNEAL 273 >gi|319405828|emb|CBI79460.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Bartonella sp. AR 15-3] Length = 250 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 84/250 (33%), Gaps = 21/250 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +++ +I S NA LK F+ + +N GFD Sbjct: 1 MK---LLAVAFIISATLFSQLANAKT---------LKIATEGSYPPFSYIDSNNKLHGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + L L +++ D + + T R + F Sbjct: 49 IDITHALCEKM---KIECVITIQDFDGIILGLLAQKYDAIIASLSPTQER--LKKIDFTD 103 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y I+ K I S G ++ VQ TT + +++ + + + Sbjct: 104 AYYSTELAVIVLKDSQIKEISAEAFKGKNLGVQLNTTQAIYAENHYVSKG--VNIKFYPT 161 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E+ ++R D D + + H + ++ P+A AI Q + + Sbjct: 162 TKEVIRDLLSNRLDIVILDKLQILDWFKNKGKDCCHFLGSIKGTQLPIAIAIRQNNDDLK 221 Query: 239 NIVSWTHYAM 248 + + A+ Sbjct: 222 SQFNKAIKAI 231 >gi|58698602|ref|ZP_00373499.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Wolbachia endosymbiont of Drosophila ananassae] gi|225630093|ref|YP_002726884.1| amino acid ABC transporter, periplasmic amino acid binding protein [Wolbachia sp. wRi] gi|58534872|gb|EAL58974.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Wolbachia endosymbiont of Drosophila ananassae] gi|225592074|gb|ACN95093.1| amino acid ABC transporter, periplasmic amino acid binding protein [Wolbachia sp. wRi] Length = 244 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 72/211 (34%), Gaps = 19/211 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +I+ + IL +I ++ I+ F NG + GFD Sbjct: 1 MKKYILNAIIVISILLTGC---KEDKHDNI-----IRFAISADYPPFEYY-ENGKFTGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ + ++ + + + + F ALQS +D T RE F Sbjct: 52 IELAQLVAKELGKEA---IFKDMQFSTIFAALQSNSVDAAISTIGSTEEREK--NFDFSN 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + HK K I+ ++ L+ I VQ GT E+ L ++ I + Sbjct: 107 SYYTGEFGILYHKNKPIAGINNLTHKKIAVQLGTVMEIWLKEHVP---TTAQIIAIDNNN 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 + ++ D D + P Sbjct: 164 QAVETLKSGHVDGVLIDE--FQGKVFSKKNP 192 >gi|307152145|ref|YP_003887529.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] gi|306982373|gb|ADN14254.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] Length = 261 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 92/253 (36%), Gaps = 16/253 (6%) Query: 1 MYKD-----FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K ++I + + F ST A+ L +I RG L G+ G+ Sbjct: 1 MIKSQKLLNLSLAIALMTLGLFPWASTRAASLEEIIHRGKLIVGVKDNTRPLGFKNEQGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GF++D + L+ + + P+N ER + +DI T R Sbjct: 61 LQGFEIDVAQRLAQELLGSAEAVILRPVNNLERLQVVIDGTVDITIARVTDTSSRSRV-- 118 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + Y DG G + K I + + + + + ++T + I Sbjct: 119 VDLSIYYYLDGTGLVT-KNPLIRNRFDAASSRVALLNNSSTIAVIKSEMP----NAKLIG 173 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + EE + + + D + GD S L ++ LP +S L + +G Sbjct: 174 VDSYEEALSLLESGQADVFAGDNSILAGWVQEYP---QYRQLPVRLSGEALCVVMPKGL- 229 Query: 236 EWYNIVSWTHYAM 248 ++ ++ + + A+ Sbjct: 230 QYKSLHNRVNDAI 242 >gi|326560579|gb|EGE10960.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis 103P14B1] gi|326576281|gb|EGE26196.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis CO72] Length = 262 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 35/237 (14%), Positives = 73/237 (30%), Gaps = 10/237 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKR---GFLKCGINTGLVGFAEVKANGDWK 57 M K F + S + + F + A+G Sbjct: 1 MIKPFATLATVACVTLAGCTKEETSTQTTAPAQPSQKSIVIATEAAYPPFNDTDASGQII 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD AL + + + Q + + +L + + D + T R+ + Sbjct: 61 GFDVDVMNALCAEM---HAHCQIIAQDWDGLIPSLLAGKYDAIIAGMSITPERQA--QVD 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + + ++ K G + ++ ++ Q GTT + + + + + Sbjct: 116 FSDSYFSNTIVWL-AKSDGSFDPNNITNQTLASQRGTTGAAYITEKYD-GKDGNRVQLHD 173 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +A R A + + +I +I + L A+ +GD Sbjct: 174 TYTNAYLDTKAGRNHAVMAEKVSAIDWLKQEGNGEFGLIGEEIDNNDHLGIAVRKGD 230 >gi|289672222|ref|ZP_06493112.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae FF5] gi|330900966|gb|EGH32385.1| extracellular solute-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 254 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 80/255 (31%), Gaps = 27/255 (10%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 YK + + ++F+ +K GI F A+G GFD Sbjct: 4 YKKILLIAAATLAFSGSAFAE------------KMKMGIEGAYPPFNNKDASGQVVGFDY 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + +AL + + + + + AL + + D L + T R + F Sbjct: 52 EIGQALCAKMKVECEAVT---SDWDGIIPALMASKFDFLISSLSITEER--QQVVDFTNP 106 Query: 122 TYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 Y + FI K I + L+G S+ Q T L D P + Sbjct: 107 YYSNKLQFIAPKTSSIDVSSIEKAKESLAGKSVGAQRSTLAATWLEDKLG----IMDPKL 162 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ E + R DA D + + + ++ + A+ +GD Sbjct: 163 YDTQENAFLDLSSGRVDAMLADKYVSFEWLKSEAGQNFEFKGEPVVENDKIGIAVRKGDD 222 Query: 236 EWYNIVSWTHYAMVT 250 ++ ++ Sbjct: 223 ALRERLNVALKEIIA 237 >gi|70730426|ref|YP_260167.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] gi|68344725|gb|AAY92331.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] Length = 259 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 86/253 (33%), Gaps = 21/253 (8%) Query: 1 MYKDFFVS-ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + +L + + + + K+ L+ G+N F A G +GF Sbjct: 1 MTKHWLAVPLLAIACVSMGASA---------KEWKELRFGVNPSYPPFESTTAGGGVQGF 51 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 VD A+ + + K ++ + AL++ + D + + T R + F Sbjct: 52 GVDLGNAICAEL---KLKCVWVSNDFDGLIPALKAGKFDAIESSMTVTDARRK--QIDFS 106 Query: 120 PITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + K G+ + L G ++ GT E ++ Sbjct: 107 DRLYAGPTAIVTRKGSGLEPTGESLKGKTLGYMQGTVQETYARAKLGPAG--VKLRAYQN 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV---ILPDIISKSPLAPAIIQGDT 235 +++ A R DA D L + + ++ + D + S +A + + Sbjct: 165 QDQVYADLVYGRLDASIQDKLQAQMSFLASPQGADFENSVGISDPLVPSEIAIGLRKDQD 224 Query: 236 EWYNIVSWTHYAM 248 E +++ A+ Sbjct: 225 ELKAMLNGAIQAL 237 >gi|317491413|ref|ZP_07949849.1| lysine-arginine-ornithine-binding periplasmic protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920960|gb|EFV42283.1| lysine-arginine-ornithine-binding periplasmic protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 243 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 86/248 (34%), Gaps = 25/248 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L I + ++ ++ F + AN +GFD Sbjct: 1 MKKIIIATVLAGISVSASAAE-------------TIRFAAEASYPPFEFMDANNQMQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + + + + +L+ K+ID + D T R+ + F Sbjct: 48 IDLANAICKQM---KATCTFTNQSFDSLIPSLKFKRIDAVISGMDITPERQKQVA--FTA 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K ++ ++ L G + +Q G+T + L + P+ ++ + Sbjct: 103 PYYDNSALFIAEKG-KVADIAALKGKRVGMQNGSTHQKYLQEKHPE----ITPVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N + + + L A+ Q + E Sbjct: 158 NAILDLKNGRLDAVFGDTAVVNEWLKQNSALTAVGDKVTDPNYFGTGLGIAVRQNNAELL 217 Query: 239 NIVSWTHY 246 N + Sbjct: 218 NQFNAALN 225 >gi|307729123|ref|YP_003906347.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] gi|307583658|gb|ADN57056.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] Length = 260 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 64/248 (25%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ L+ S A IK G + G F +G GFD Sbjct: 1 MKSIRSIVLVALLHAVAASPVFAADEFAQIKSSGVFRIGTEGTYAPFTYHDESGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ ++ + P Q++ L + D + T R+ F Sbjct: 61 VEIGTQIAQRLGVKP---QFVEGKWDGLIAGLDVNRYDAVINEVAVTDARKA--KYDFSD 115 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ I + L G + A I + Sbjct: 116 PYITSHAALIVRSDNTTIKTFDDLKGKKSANTLTSNFGRIAAA------HGAEVIPVQGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI--ISKSPLAPAIIQGDTEW 237 E A R DA D + K + D S A I +G E Sbjct: 170 NESIDLLTAGRVDATVNDSLSFLDFKKHKPNAKVKIAALDTSGESSDKSAVLIRKGSPEL 229 Query: 238 YNIVSWTH 245 ++ Sbjct: 230 VAAINKAL 237 >gi|13470758|ref|NP_102327.1| amino acid ABC transporter amino acid-binding protein [Mesorhizobium loti MAFF303099] gi|14021501|dbj|BAB48113.1| probable amino acid binding protein of ABC transporter [Mesorhizobium loti MAFF303099] Length = 261 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 78/224 (34%), Gaps = 16/224 (7%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + L+ G F + ++G GFD+D +AL + K ++ + A Sbjct: 24 QEKTLRIGTEGAYPPFNNLTSDGKLVGFDIDIAQALCDQM---KVKCTFVAQDWDGIIPA 80 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASIC 149 LQ+ + D + + T R+ + F Y + K + + + L+G +I Sbjct: 81 LQAGKFDAIVASMSITPERKE--KVDFTHKYYNTPSALAVPKDSTLKGVTKADLAGKTIG 138 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V TT + + + E A R DA DI L + D Sbjct: 139 VATTTTHFNYASKTY----TDSTVKGYPSSPEEQADLANGRLDAIEDDIVVLQQWLDSPD 194 Query: 210 RPSEHVIL-PDIISKSPLAP----AIIQGDTEWYNIVSWTHYAM 248 ++ P P A+ +G+T+ N ++ A+ Sbjct: 195 GACCKILGQPSPQPVEIFGPGAGIAVRKGETDLVNKLNEAIDAI 238 >gi|319408410|emb|CBI82065.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella schoenbuchensis R1] Length = 250 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 85/248 (34%), Gaps = 21/248 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++I+ ++ + + NA LK F+ + +N +GFD Sbjct: 1 MK---LLAIILMVSVTLFTQLVNAKT---------LKIATEGSYPPFSYIDSNNKLQGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + + L +K+ D + + T R + F Sbjct: 49 IDISYALCEKMNVE---CSIILQDFDGIIPGLLAKKYDAIIASLAPTQER--LQKIDFTD 103 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y I+ K I S G ++ VQ+ TT + D + + + ++ Sbjct: 104 AYYRTALAVIVPKDSQIKEISAEAFKGKNLGVQSNTTQSMYAEDNYASKG--VNIKLYPT 161 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E++ +HR D D + + + ++ ++ P+A I + + Sbjct: 162 AIEVNRDLLSHRLDVVILDKLQILSWLENEGKECCRLLGSIEETQLPIAIGIRHNNDDLK 221 Query: 239 NIVSWTHY 246 N + Sbjct: 222 NKFNEAIK 229 >gi|317495049|ref|ZP_07953421.1| extracellular solute-binding protein [Gemella moribillum M424] gi|316914821|gb|EFV36295.1| extracellular solute-binding protein [Gemella moribillum M424] Length = 192 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 73/199 (36%), Gaps = 14/199 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEV---KANG 54 M K + + + + T+ S + + +IK++G + G++ + Sbjct: 1 MKKLLLLITVMVAAITLTACSGAKTTKTKMDEIKEKGKIVLGVSPDYPPYEFTTTENGQK 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G D+ + ++ + + ++ + A+ + ++D++ + T R+ Sbjct: 61 KVVGADIYLAQEIAKKLGVE---VEIQEMAFDSLIAAVNANKVDMVISGVNPTEERKK-- 115 Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F I Y F+++K I SV+ L G + VQ G+T E + K Sbjct: 116 AVDFSDIYYTGKGIFVVNKDSAEIKSVADLKGKKVGVQKGSTYETYAKEQLKI--EDKDL 173 Query: 174 IVFERVEEIDAAYRAHRCD 192 V + + + Sbjct: 174 QSLTDVPSLLQDLKNKKLM 192 >gi|239982245|ref|ZP_04704769.1| secreted protein [Streptomyces albus J1074] Length = 316 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 83/250 (33%), Gaps = 15/250 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T+ + + G +K G + +G G DVD AL + + Sbjct: 48 TAAPLADKLPKKYQDSGVVKVGSDIAYPPVEFKDKDGKTVGLDVDLAAALGEQLGVE--- 104 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI----------SLGLAFRPITYFDGQ 127 +++ L+SK+ D+ T R+ G+ F Sbjct: 105 LKFENGTFDTLLGGLRSKRYDVAMSAMTDTKARQEGLDSETGKKVGEGVDFVDYFTAGVS 164 Query: 128 GFIMH-KKKGISSVSQLSGASICVQAGTTTELTL-ADYFKAHNMKYHPIVFERVEEIDAA 185 + K +GI + L G I VQ GT + A+ K + F+ ++ Sbjct: 165 IYTNKGKDQGIKTWQDLCGKKIVVQRGTVSHDLAKAESKKCEKGEIKMETFDNDQQAQTR 224 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R+ DA + D T+ ++ + + +P AI + + E + + Sbjct: 225 LRSGGADAGSSDFPVAAYAVKTSGGGDHFELVGEQVEAAPYGIAISKSNPELRDAIKAAL 284 Query: 246 YAMVTAEELG 255 A++ + E Sbjct: 285 DAIIESGEYD 294 >gi|210629971|ref|ZP_03296194.1| hypothetical protein COLSTE_00078 [Collinsella stercoris DSM 13279] gi|210160722|gb|EEA91693.1| hypothetical protein COLSTE_00078 [Collinsella stercoris DSM 13279] Length = 275 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 89/239 (37%), Gaps = 16/239 (6%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFD-- 73 ++ + S L I+ RG L G+ + G+ ++G ++D C ++++IF Sbjct: 24 GSTSAAPGSKLAAIQARGQLNAGVKKDVPGYGYYDPAARTYEGMEIDLCYQVAASIFGVS 83 Query: 74 -----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + + + + K R + + Q+DI+ T R F D G Sbjct: 84 YEEARERELVAFTDVTPKTRGPLIDNDQLDIVCATYTITPER--RESWDFSSAYRTDYVG 141 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP--IVFERVEEIDAAY 186 ++ K+ G ++ L G I V G TT+ + K ++ P + F I ++ Sbjct: 142 LMVKKRSGFKRIADLDGRIIGVSQGATTQGLIEQMLKDEDIDATPEFLAFSGYPIIKSSL 201 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A D + D S L + ++ P++ + ++ +V T Sbjct: 202 DAGNIDCFAMDRSTLAGYM----NETVELLEPEVKFGEQQYGIATKKGSDLSAVVDQTV 256 >gi|241765820|ref|ZP_04763759.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241364268|gb|EER59430.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 253 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 54/274 (19%), Positives = 98/274 (35%), Gaps = 23/274 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ + FS A L DIKK G + F K GF+ Sbjct: 1 MK---LFKVIASTLALCAVFSVQARSLDDIKKGGKIIVATEGQFAPFNYFKGT-TLTGFE 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ ++ + KI++ + L+ + D++ + T R + F Sbjct: 57 VEVAELVAKKMG---LKIEWKTIGFDALLTGLKQDRWDLVIASHGVTEERAK--AVTFTE 111 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ++ G ++ I S L+G + VQ GT+ + MK F Sbjct: 112 P-HYCSGGMVISMDPAIRSAKDLAGKIVAVQTGTSYLENVQKVTTIKEMKN----FPTDV 166 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + +A +HR DA+ D A ++ P + L +++ +A A+ +G+ + Sbjct: 167 DARSALTSHRVDAWVTDR--FVAKEVVAKNPKAGLKLGEMVFIERIASAVAKGNQPLAD- 223 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 A A + + VSK N DV+ Sbjct: 224 ------AWSKALAETMADGSYTAVSKKYFNEDVR 251 >gi|218440339|ref|YP_002378668.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] gi|218173067|gb|ACK71800.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] Length = 276 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 88/254 (34%), Gaps = 15/254 (5%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + L LI L S A L I++ G L G + F G+W G Sbjct: 1 MNKNKITLFFLSLICLTNYSLKVYAETVLEKIQRTGELNAGARIDAIPFGYKTDKGEWTG 60 Query: 59 FDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + V+ R + + + P K+ + RF ++ +Q+DI+ T T R Sbjct: 61 YSVELLRLIHQDLEKKLNKPIKLNLKEVTIDNRFQTVEKQQVDIVCGATTITQQR--LEK 118 Query: 116 LAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + G F++ L +I TTT+ + + + Sbjct: 119 VDFSIPFFMTGSQFLVKLEDATNFDINGTLKDKAIAYLPNTTTDQIIRQIYPFAKWQ--- 175 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPD-IISKSPLAPAII 231 +E +A A D L + + P + ++P+ ++ A + Sbjct: 176 -TVTNRDEGVRKLKAGEVTAVVSDGILLVGEIVRQGNNPRDFALMPNVPMTTELYACILP 234 Query: 232 QGDTEWYNIVSWTH 245 + + +W V T Sbjct: 235 KNNPQWKEFVDQTI 248 >gi|116254800|ref|YP_770636.1| putative substrate-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115259448|emb|CAK10586.1| putative substrate-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 275 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 77/239 (32%), Gaps = 10/239 (4%) Query: 1 MY-KDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M ++ L + S A L +K G LK G T F + A G+ G Sbjct: 1 MKAHSLLKGLVGAAFLIGAAVSAHAADTLAAVKAAGTLKVGTETAFAPFDYIDA-GEHTG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +VD + + I+++ L F AL++ + D+++ T R F Sbjct: 60 LNVDLFAEIGKELGVK---IEWVALPWDGVFPALEAGKFDVVAGPATITKKR--LERYRF 114 Query: 119 RPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 P + IS ++G I V T L ++ + K + Sbjct: 115 TPPIAEATIAILKKAGDTTISKPEDIAGKKIGVGKATAQLDQLKEFSETLPTKVDVREYP 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E A A R + + + + + V+LP KS ++ Sbjct: 175 AFTESYADLAAGRIAGVANSLPNIA-FVASQRKGTFEVVLPPFGKKSYFGFIGLKDADH 232 >gi|317492206|ref|ZP_07950635.1| extracellular solute-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919545|gb|EFV40875.1| extracellular solute-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 256 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 77/246 (31%), Gaps = 14/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++L + ++ + A L IK G +K G + +G GFD Sbjct: 1 MKK-MTLALLATSLFATSALAQAADDLAAIKSAGVMKFGTEGTYAPYTYHDKSGKLVGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RA++ + P ++ L +K+ D + T R+ F Sbjct: 60 VDVARAVAEKMGVKPE---FVEGRWDGLIAGLSAKRYDAVINQVGITDERKA--KFDFSQ 114 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ I S + L G Q+ T+ LA A + + Sbjct: 115 PYIGSKAVLVVRDDNTTIKSFADLKGQK-AAQSLTSNYSKLATKNGA-----DLVPTDGF 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R A D + K ++ D + A + + E Sbjct: 169 NQSLDLVLSGRAAATLNDNLSFLDFKKHKPDAKVKIVATD-ENTENSAILLRKDQPELVK 227 Query: 240 IVSWTH 245 V+ Sbjct: 228 AVNKAL 233 >gi|317057054|ref|YP_004105521.1| family 3 extracellular solute-binding protein [Ruminococcus albus 7] gi|315449323|gb|ADU22887.1| extracellular solute-binding protein family 3 [Ruminococcus albus 7] Length = 285 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 79/258 (30%), Gaps = 21/258 (8%) Query: 1 MY--KDF--FVSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKAN 53 M K +S + + + S GD K G + + N Sbjct: 1 MKYTKILTAMLSAAVMTAALAGCGAKDGSKSGDKKNSKGENTFTVGFDAEFPPYGYKDDN 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G++ GFD+ + + K P++ + + L S ID + + Sbjct: 61 GEYVGFDLSLAEEVCKRNGWELVK---QPIDWDSKDMELSSGSIDCIWNGFTINGREDA- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA------DYFKAH 167 + + Q ++ GI +S LSG + VQA ++ L D Sbjct: 117 --YTWTTPYVDNSQVVVVKADSGIEKLSDLSGKVVIVQADSSALHALTGDDASDDNKALA 174 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + +A D A+ +R S+ IL + IS Sbjct: 175 ASFADLQQVGDYNSAFMNLDSGAAEAVCLDY--GVAVYEVANRGSDFKILDEKISTEQYG 232 Query: 228 PAIIQGDTEWYNIVSWTH 245 +G+TE + V T Sbjct: 233 VGFQKGNTELRDKVQSTL 250 >gi|116514276|ref|YP_813182.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093591|gb|ABJ58744.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 500 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 89/264 (33%), Gaps = 26/264 (9%) Query: 1 MYK--DFFVSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K ++L L LF + + +++ IKK G L GI+ Sbjct: 1 MKKLIKIMTALLLLAGLFTAAIPAVDAASSRKVASGTVMKKIKKSGKLVVGISADYPPLE 60 Query: 49 E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 V + G DV+ + ++ + ++ ++ +AL++ +ID++ Sbjct: 61 FTKNVNGKNKYVGVDVELAKQIAKDLGVK---LEIKNMDFDSLLVALETGKIDVIISGMT 117 Query: 106 WTLLREISLGLAFRPITY---FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 T R+ + F I Y D K +S + G ++ Q G+ +L Sbjct: 118 PTAERKK--SIDFSKIYYAEKSDYFVISKTNKAKYTSTASFKGKTVGAQTGSLQYTSLKK 175 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 +K + + A ++ + DA TND V + Sbjct: 176 NAAKSGIKVKGLAKISN--LLMALKSGKLDAVLLGE-LNAKTYATNDTSLSLVKSSLSQA 232 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHY 246 + A + +G + ++ T Sbjct: 233 QMGNAVGVAKGQGDLVKAINKTIN 256 >gi|84386734|ref|ZP_00989760.1| lysine-arginine-ornithine-binding protein [Vibrio splendidus 12B01] gi|84378540|gb|EAP95397.1| lysine-arginine-ornithine-binding protein [Vibrio splendidus 12B01] Length = 253 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 84/253 (33%), Gaps = 26/253 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K V+ + + +F + K ++ + F+ +G+ +GF+VD Sbjct: 2 KWILVAFVSVFSVFTYA-----------KDWKQIRFTVEGAYPPFSWTTQDGELEGFEVD 50 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 AL + K + +L S++ D + T RE + F Sbjct: 51 LANALCIEL---EVKCIISKTDWDGIIPSLLSRKNDAIIAAMTITEEREK--KVNFTMPY 105 Query: 123 YFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 F+M K + I L+ +I VQ T + L++ + + +E Sbjct: 106 AKVPTRFVMEKGREINMDDGSLNELTIGVQRATIGDKYLSEIYP----DVDIKRYGSFDE 161 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTE 236 R D+ G L A L D+ ++ ++ A+ + D E Sbjct: 162 AFTDLLNGRLDSVFGGSMGLNAGFLETDQGKDYHFTGPKFTEEKWFGRGIGVAVRKQDDE 221 Query: 237 WYNIVSWTHYAMV 249 +++ ++ Sbjct: 222 LKDLIDSGIQRLI 234 >gi|239931234|ref|ZP_04688187.1| sugar-binding protein [Streptomyces ghanaensis ATCC 14672] gi|291439606|ref|ZP_06578996.1| sugar-binding protein [Streptomyces ghanaensis ATCC 14672] gi|291342501|gb|EFE69457.1| sugar-binding protein [Streptomyces ghanaensis ATCC 14672] Length = 332 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 82/256 (32%), Gaps = 17/256 (6%) Query: 16 FFTSFSTNASILGDIK-KRG---FLKCGINTGLVGFAEVKAN----GDWKGFDVDFCRAL 67 + + + IK +RG L G++ + N G +GFD+D + Sbjct: 55 TLSPSRADGETIEAIKNRRGEKRKLIVGVDQNSYRWGYRNPNSGESGRLEGFDIDLVHRI 114 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + I D +Q+ + +R A+Q ++D++ R R +AF + GQ Sbjct: 115 AEDILGDADAVQFKAIPTDQRIPAIQDGRVDMVVRTMTINCAR--MEEVAFSAPYFRTGQ 172 Query: 128 GFIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHP---IVFERVEEID 183 + K + L+ IC AG+T L + KA + + Sbjct: 173 QVLAPKSSPVEGYDGTLANRRICTAAGSTAYAKLEEDKKAGALPESTDIRTTVPNQLDCL 232 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + DA D + + + + + + A+ + + V+ Sbjct: 233 VRLQLGEVDAVVTDAALAASQAAQDP---TVRLKGEAFTTEYYGVAMKKDADDLVRRVNQ 289 Query: 244 THYAMVTAEELGITQK 259 E G Sbjct: 290 ILVDFREDTEDGWQSS 305 >gi|159026223|emb|CAO86379.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 299 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 55/307 (17%), Positives = 111/307 (36%), Gaps = 22/307 (7%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K V + C++ +F S S +++ + + GFL G + ++ V G+ G+ Sbjct: 1 MKKILQLVGLGCILPMFLASASLAETVVEKVARTGFLTVGTRFDAIPYSYVNDKGELVGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +D + + P +Q + N + L ++ +T +T R + Sbjct: 61 SMDVLERIRKRLETRLGRPVTLQMIEANQPGEKINLIRSGDIDIACSTAFTWERAKV--V 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G + K +S+ L G I + + + + Sbjct: 119 DFSISYSISGIRILAKKGSNLSTPQSLIGKRIALVPTSAAVDVIKLVQPQA---TIVTTY 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDT 235 VEE A + + DA GD +L L D P + I+P+ + +A + + ++ Sbjct: 176 STVEEALEALKTGKIDAIAGDSISLAGTILR-DNPKIYEIVPEEALANFGIACMVPENNS 234 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295 + + V++ + + Q I T + R+ G I L L + Sbjct: 235 TFLDDVNYAI--------VKMMQDYITN--DTATVSQIDRWFGSQGMVPIPPEL-LKGFF 283 Query: 296 TYRIIRH 302 +++I H Sbjct: 284 AFKVIEH 290 >gi|295694799|ref|YP_003588037.1| extracellular solute-binding protein family 3 [Bacillus tusciae DSM 2912] gi|295410401|gb|ADG04893.1| extracellular solute-binding protein family 3 [Bacillus tusciae DSM 2912] Length = 265 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 82/235 (34%), Gaps = 19/235 (8%) Query: 18 TSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 T +S + + G L G +T F + NG GFD+D +A++ Sbjct: 18 AGCGTGSSTPSNSGQSGQTQPVTLHVGADTTFPPFE-TEKNGQVTGFDIDLIKAIAQK-- 74 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 + ++ ++ + ALQ+ ID+ T R+ + F Y G ++ Sbjct: 75 -ENMQVDLKTMDFQGLIPALQTGDIDVAVAGITITDDRKK--SVNFSDPYYHSGLSILVK 131 Query: 133 KKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 K I+ L+G ++ V+ GTT AD + + F + + + + Sbjct: 132 KDNTTINVPDDLTGKTVAVKLGTT-----ADLMFSKKPGVNVKRFTNISDAYSELQNGGA 186 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 DA D T I+ +++ A+ + + ++ Sbjct: 187 DAVVFDNPVNLNYIRTGHD--NVKIVGPLLTGEDYGIAVRKNAPDLLQKINDGLK 239 >gi|302554087|ref|ZP_07306429.1| secreted protein [Streptomyces viridochromogenes DSM 40736] gi|302471705|gb|EFL34798.1| secreted protein [Streptomyces viridochromogenes DSM 40736] Length = 317 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 86/255 (33%), Gaps = 19/255 (7%) Query: 16 FFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 S + A L I+ +G +K G + +G G D D A+ + D Sbjct: 45 GSASSAPLADKLPKSIRDKGVVKVGSDIAYAPVEFKDNSGKTVGIDPDLAAAMGKQLGVD 104 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL----------GLAFRPITYF 124 Q+ L+SK+ DI T R+ + G+ F + Sbjct: 105 ---FQFENGTFDTLITGLRSKRYDIAMSAMTDTKDRQEGIDSDTGKKVGEGVDFVD-YFT 160 Query: 125 DGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPIVFERVE 180 G K +GI + S L G I +Q GT +E K K F+ + Sbjct: 161 AGVSIYTKKGDDQGIKTWSDLCGKKIVLQRGTVSEDLAKAESKKCPAGKKIAIEAFDNDQ 220 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + RA A + D T+ + ++ + + +P A+ + T+ + Sbjct: 221 QAQTRLRAGGAAAGSSDFPVAAYAVKTSGGGKDFQLVGEQVEAAPYGIAVAKNQTQLRDA 280 Query: 241 VSWTHYAMVTAEELG 255 + A++ + E Sbjct: 281 LKAALDAVIKSGEYE 295 >gi|261822130|ref|YP_003260236.1| glutamine ABC transporter periplasmic protein [Pectobacterium wasabiae WPP163] gi|261606143|gb|ACX88629.1| cationic amino acid ABC transporter, periplasmic binding protein [Pectobacterium wasabiae WPP163] Length = 248 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 82/247 (33%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M S+ L ++ S L +T V F + + + GFD Sbjct: 1 MKSLLKASLAALTLMMSVSSYAAE---------KELIVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + K P++ ALQ++ ID+ T R+ + F Sbjct: 51 IDLWDAIAKQL---NLKYTLKPMDFGGIIPALQTRNIDLALAGITITEERKK--AIDFSD 105 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I L+G + V++GT + DY KA+ F + Sbjct: 106 GYYDSGLLVMVKADNNDIKGEQDLAGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + +R DA D + T + + D I A +G+ E Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSIKAQQYGIAFPKGNNELRE 220 Query: 240 IVSWTHY 246 V+ Sbjct: 221 KVNGALK 227 >gi|71064872|ref|YP_263599.1| ABC basic amino acid transporter, periplasmic binding protein [Psychrobacter arcticus 273-4] gi|71037857|gb|AAZ18165.1| ABC basic amino acid transporter, periplasmic binding protein [Psychrobacter arcticus 273-4] Length = 266 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 85/270 (31%), Gaps = 18/270 (6%) Query: 3 KDFFVSILCLIILFFTSFST----NASILGDIKKRGF----LKCGINTGLVGFAEVKANG 54 + + S+ L + S A D G ++ F A+G Sbjct: 6 RLLWSSMTVTAALVLGACSQPANDAADTNADTPAAGTSGKTIRIATEGAYPPFNYTNADG 65 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+D AL + +K + + + L +++ D + T R Sbjct: 66 SLAGFDIDVANALCEQM---QAKCEIVAQDWDGIIPGLLAQKYDAVIAGMSITAER--QE 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F + + ++ K + ++ Q TT L D + Sbjct: 121 KVDFSEPYFANTMVWLTDTKGS-FDPKVIKNLTLGGQRSTTPGAYLQDNY-EGKDGNTVK 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQG 233 +++ + ++ R D + + + D P I+ +I + +A A+ +G Sbjct: 179 LYDSYDNAYLDLKSGRSDVVLAEKVSAKSWLA--DNPEGFGIVGDEIDNDDNIAIAVRKG 236 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 D + E + QKN Q Sbjct: 237 DAIKEDFNKALSEIRSNGELARLEQKNFGQ 266 >gi|86147680|ref|ZP_01065988.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio sp. MED222] gi|218709553|ref|YP_002417174.1| ABC transporter substrate-binding protein [Vibrio splendidus LGP32] gi|85834461|gb|EAQ52611.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio sp. MED222] gi|218322572|emb|CAV18731.1| ABC transporter: substrate binding protein precursor [Vibrio splendidus LGP32] Length = 247 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 84/259 (32%), Gaps = 25/259 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L ++ +K + F + N +GFD Sbjct: 1 MKKILLASLIGLSSAGMAVNASAQD---------EIKFAMEATYAPFEYMDENNQIQGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + AL+ K+ D D T R + F Sbjct: 52 VDLANALCEEM---KATCTFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LKQVNFSN 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI + ++ + L G + VQ G+T + L + + + + Sbjct: 107 AYYDNSAAFISI-EGKVADQAALEGKRVGVQNGSTHQSFLLEQMA----GVTAVPYSSYQ 161 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + + R D+ GD + + D + + + ++ A+ + + E Sbjct: 162 DAFIDMKNGRIDSVFGDTAVVAEWFKKQDNLT--YVGDQVTNQEYFGNGFGIAVNKSNQE 219 Query: 237 WYNIVSWTHYAMVTAEELG 255 + ++ A+ E Sbjct: 220 LVDQLNVALAAVKANGEYD 238 >gi|156742157|ref|YP_001432286.1| extracellular solute-binding protein [Roseiflexus castenholzii DSM 13941] gi|156233485|gb|ABU58268.1| extracellular solute-binding protein family 3 [Roseiflexus castenholzii DSM 13941] Length = 295 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 92/287 (32%), Gaps = 45/287 (15%) Query: 1 MYKDFFV--SILCLIILFFTSFSTNA--------------------------------SI 26 M K + +++ I+ A Sbjct: 1 MKKQMLLIVTLIAAILAISACGGAPAAQPTQPAAQPTQPAAQPTQPAAQPTQPATQPEGK 60 Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L I+ G L G + + + ANG++ GFD+D RA+ + +++ + Sbjct: 61 LAQIRAAGKLIVGTSADYPPYESIDANGNFVGFDMDLIRAVGEKLG---VQVEIRDMPFD 117 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLS 144 +LQ +ID + T RE + F FI I S + Sbjct: 118 SLIASLQEGKIDAVIAAMQATAEREE--KVDFTIPYRMTKDAFIGAGDTTIVMSKPEDAA 175 Query: 145 GASICVQAGTTTELTLADYFKAHNMKY--HPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 G +I Q GT E + A + +ER ++ + R D A Sbjct: 176 GMTIGAQTGTVQEGWIQKNLVATGLTPADKVFSYERADQAALDLASGRLQLVLMD--AEP 233 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 AL+L + +++ + ++ + AI +G + + ++ Sbjct: 234 ALELAQKNNLKVLLVTETTAEGGKSIAIPEGAGDLKAELDRIIQGLI 280 >gi|319783613|ref|YP_004143089.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169501|gb|ADV13039.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 261 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 77/224 (34%), Gaps = 16/224 (7%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + L+ G F + A+G GFD+D +AL + K ++ + A Sbjct: 24 QEKTLRIGTEGAYPPFNNLTADGQLVGFDIDIAKALCDEM---KVKCTFVAQDWDGIIPA 80 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASIC 149 LQ+ + D + + T R+ + F Y + K + + L+G +I Sbjct: 81 LQAGKFDAIVASMSITPERKE--KVDFSNKYYNTPSAIAVPKDSTLKGVTKEDLAGKTIG 138 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V TT + + + E A R DA DI L + D Sbjct: 139 VATTTTHFNYASKTY----TDSTVKGYPSSPEEQADLANGRLDAIEDDIVVLQQFLDSPD 194 Query: 210 RPSEHVIL-PDIISKSPLAP----AIIQGDTEWYNIVSWTHYAM 248 ++ P P A+ +G+T+ N ++ A+ Sbjct: 195 GACCKILGQPSPQPVEIFGPGAGIAVRKGETDLVNKLNSAIAAI 238 >gi|116254532|ref|YP_770368.1| putative substrate binding periplasmic component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115259180|emb|CAK10298.1| putative substrate binding periplasmic component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 280 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 91/261 (34%), Gaps = 17/261 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F++ + + + S A+ L IK G +K G+ F+ NG G+D Sbjct: 6 RRLFLAATMGLAVAVGAGSAMAAERTLAAIKADGVIKIGVEGVFAPFSYR-ENGVIVGYD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + P ++ AL S + DI+ + +T R + F Sbjct: 65 VDLAEMMFKDLGVKPE---FVDTQWSGIVPALLSSKFDIIMSSLSYTKER--MQKVNFSI 119 Query: 121 ITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYF-----KAHNMKYHP 173 ++ + I S +SG I ++AGT E ++ + N Sbjct: 120 PYADSSLAMLVRAADESTIKSFDDMSGKPIAIKAGTPEEASMPKFNEQVEKAKGNGFGEV 179 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 VF+ A D +++ L + P ++ ++ ++ S I + Sbjct: 180 KVFDSEPMSILALNQGTVDGVISNMTNLGLVIKNA--PGKYALVQNVAGSSLAGIGIRKE 237 Query: 234 DTEWYNIVSWTHYAMVTAEEL 254 D E + A + +L Sbjct: 238 DEELRKYIDEQLLAATKSGKL 258 >gi|238789652|ref|ZP_04633435.1| Arginine-binding periplasmic protein 2 [Yersinia frederiksenii ATCC 33641] gi|238722205|gb|EEQ13862.1| Arginine-binding periplasmic protein 2 [Yersinia frederiksenii ATCC 33641] Length = 243 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 83/250 (33%), Gaps = 25/250 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +I L + F++ + ++ + F + N + GFD Sbjct: 1 MKKLLLATI--LSGMVFSATAAE-----------TIRFAASATYPPFESIGTNNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + AL+ K+ D + D T R S + F Sbjct: 48 MDLAKALCKQM---EANCTFTNQAFDSLIPALKFKRYDAVISGMDITPER--SKQVTFTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K SS + L G I ++ GTT + L D + ++ + Sbjct: 103 PYYANSAIVIAPKG-KFSSFADLKGKKIGMENGTTHQKYLQDKHPE----IQTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + TN + + L A+ +T Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPNLASVGEHVTDPQYFGTGLGIAVRPENTALL 217 Query: 239 NIVSWTHYAM 248 ++ A+ Sbjct: 218 EKLNKAIDAV 227 >gi|13473306|ref|NP_104873.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Mesorhizobium loti MAFF303099] gi|14024054|dbj|BAB50659.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Mesorhizobium loti MAFF303099] Length = 267 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 82/254 (32%), Gaps = 16/254 (6%) Query: 2 YKDFFVSILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + S++ L + + L IK+ G +K G F A+G GF Sbjct: 10 KMKWLKSLIVAGTLQALAVTSGHAGANLDQIKQAGVIKVGTEGTYAPFTYHDASGALVGF 69 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ +A++ + +++L L K+ D + T R+ F Sbjct: 70 DVEIAKAIADKLGVK---VEFLEGKWDGLIAGLDVKRYDAVINEVGITDARKA--KYDFS 124 Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 I+ I + + L G Q+ T+ LA+ A + + Sbjct: 125 DPYIASKAVLIVRGDNTDIKTFADLKGKKSA-QSLTSNFGKLAEASGA-----ELVGTDG 178 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++ R DA D + K + + + + + +GD E Sbjct: 179 FDQSIQLLLTGRADATINDSLSFLDFKKHKPDANVKIAAQE-ENADYSGVIVRKGDAELV 237 Query: 239 NIVSWTHYAMVTAE 252 ++ A + A+ Sbjct: 238 AAINKAL-ADIKAD 250 >gi|170721100|ref|YP_001748788.1| extracellular solute-binding protein [Pseudomonas putida W619] gi|169759103|gb|ACA72419.1| extracellular solute-binding protein family 3 [Pseudomonas putida W619] Length = 261 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 90/261 (34%), Gaps = 13/261 (4%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F++ L A L DI RG LK + F V + +G Sbjct: 1 MKTFRTLFLASLFCSSALMLPT-AQADALADISARGVLKVAVPQDFPPFGSVGPDLKPRG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D+D + L+ + + P+N+ R L + ++D++ + R + F Sbjct: 60 LDIDTAQLLADKLGVK---LALTPVNSTNRIPFLTTGKVDLVISSLGKNPERAAV--IDF 114 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + I+ + ++G +I V G+ ++ L+ FE Sbjct: 115 SRPYAPFYLAVFGPAEVDIAGIDAVAGKTISVTRGSIEDMELSAVAPK---GAVIKRFED 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 AAY + + + + A+ P++ ++ + SP+ + + + Sbjct: 172 NNSTIAAYLSGQVELIASGSVVMAAIAQ--KNPAKVPVVKVKLKDSPVYVGLAKNEPALL 229 Query: 239 NIVSWTHYAMVTAEELGITQK 259 + V+ T A L + Sbjct: 230 DKVNATLEAAKADGSLNRNAE 250 >gi|116254850|ref|YP_770686.1| putative substrate-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115259498|emb|CAK10636.1| putative substrate-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 273 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 93/276 (33%), Gaps = 26/276 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGF 59 M ++L L ++ + A ++ G+ N F A+G W+G+ Sbjct: 17 MK--LLPTLLAGAALVLSAVTAQA----------EVRFGVMNESYPPFFAKDASGQWQGW 64 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D A+ + K + ++ ALQSK+ D++ + T R + F Sbjct: 65 EIDLMNAVCEEM---KEKCSIVEISWDGLIPALQSKKFDVIWSSMSNTAERSKV--IDFT 119 Query: 120 PITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y I K + ++ + G +I +Q T YF A ++ Sbjct: 120 DKYYNTPSTLIGPKDQKPGATAEDVKGKTIGIQVSTIQSEYYKKYFAAA---AEEKTYQT 176 Query: 179 VEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 ++E + R D GD AL LK + + K L + G + Sbjct: 177 LDEAFQDLASGRIDYVFGDSLALDAFLKSDGGKDCCAKMGDVADDKEILGAGVSGGLRKE 236 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 + + A + ++K + D+ Sbjct: 237 DTELKAKLNTAIAA---VRASGQYDAINKKYFDFDI 269 >gi|317048781|ref|YP_004116429.1| cationic amino acid ABC transporter periplasmic-binding protein [Pantoea sp. At-9b] gi|316950398|gb|ADU69873.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. At-9b] Length = 265 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 86/241 (35%), Gaps = 21/241 (8%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L + +L +F A I + ++ ++ F G GFD+D AL Sbjct: 14 LAMAVLAGCAFGAQA----KIDQ---VRFAVDPTYPPFESKTPQGKLVGFDIDLGNALCE 66 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + +K ++ AL++++ D + + T R + F Y Sbjct: 67 QM---KTKCVWVESQFDGMIPALKARKFDAILSDMGVTEER--LKQIDFTVPLYDTKTQL 121 Query: 130 IMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 I K G + + L G ++ V+ GT E ++ + + + + ++++ + Sbjct: 122 IARKGSGLLPTAESLKGKTVGVEQGTVQERYARAKWQPNG--VNVVPYGDQAQVESDLVS 179 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSW 243 R DA D + L + + L + P+ A + +GDTE + Sbjct: 180 GRLDAVFTDAAQAAIGFLKQPQGKDF-ELAGPTVQDPIIGPGTAIGLRKGDTELKTALDD 238 Query: 244 T 244 Sbjct: 239 A 239 >gi|238784967|ref|ZP_04628966.1| Arginine-binding periplasmic protein 2 [Yersinia bercovieri ATCC 43970] gi|238714182|gb|EEQ06195.1| Arginine-binding periplasmic protein 2 [Yersinia bercovieri ATCC 43970] Length = 243 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 82/250 (32%), Gaps = 25/250 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +IL ++ T+ ++ + F + AN + GFD Sbjct: 1 MKKLLLATILSGMVFSATAA-------------DTIRFAASATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + AL+ K+ D + D T R + F Sbjct: 48 MDLAKALCKQM---EANCTFTNQAFDSLIPALKFKRYDAVISGMDITPERSKQVA--FTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K S+ + L G I ++ GTT + L D + ++ + Sbjct: 103 PYYANSAIVIAPKG-KFSTFADLKGKKIGMENGTTHQKYLQDMHPE----IQTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + TN + + L A+ +T Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPNLASVGEHVTDPQYFGTGLGIAVRPDNTALL 217 Query: 239 NIVSWTHYAM 248 ++ A+ Sbjct: 218 EKLNKAIDAV 227 >gi|209551039|ref|YP_002282956.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536795|gb|ACI56730.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 274 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 81/238 (34%), Gaps = 11/238 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + + +A+ + +IK +G L GI + V +G GFD D + + Sbjct: 22 GATTASAATVEEIKAKGTLVVGIQGDNAPWGFVNTSGKQDGFDADIATLFAKELGVK--- 78 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +++ PL R AL + ++DIL T R + + + K + Sbjct: 79 VEFQPLAVANRIPALTTGKVDILFATMAMTEERAK--SIQYSKPYAANTISLYAAKADAV 136 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + + ++ I V ++ + + D A F+ A + + A G+ Sbjct: 137 KAPADVAAWEIGVPKSSSQDKAVTD---AVGSTATIRRFDDDAATIQALISGQVKAVGGN 193 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 Y +L + D K+ G+ +W + + + EL Sbjct: 194 --QFYGQRLDAASAGTYERKID-FLKTYNGVGTRLGEKDWNEAANSFIDKIKASGELA 248 >gi|126699383|ref|YP_001088280.1| amino acid ABC transporter substrate-binding protein [Clostridium difficile 630] gi|255306801|ref|ZP_05350972.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile ATCC 43255] gi|115250820|emb|CAJ68644.1| ABC-type transport system, aminoacid-family extracellular solute-binding protein [Clostridium difficile] Length = 267 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 39/258 (15%), Positives = 84/258 (32%), Gaps = 16/258 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKR-------GFLKCGINTGLVGFAEVKAN 53 M + I+L S + K + + G + V + Sbjct: 1 MKNILKKVGIFTIMLGLLGGVVGCSKPDNEKDKDASKESKKEVVVGFDNTFVPMGFLDEK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ-IDILSRNTDWTLLREI 112 GD GFDVD + + ++++ P++ + L + +D+L T R+ Sbjct: 61 GDTVGFDVDLAKETFKRLG---MEVKFQPIDWSMKETELNDSKTVDVLWNGYSITDERKK 117 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA--DYFKAHNMK 170 +++ + Q + I+S + L + Q G+T + F Sbjct: 118 I--VSYTEPYLQNKQIIVTLSDSKINSKADLKDKEVGTQQGSTALDAVEKDKDFMNSLKG 175 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 P++++ ++ R A GD + + ++ +L D A Sbjct: 176 GAPVLYDTYDKALRDLEIGRTSAVVGDEVLIR-YYMGQKGEDKYKVLKDDFGLEDYVVAT 234 Query: 231 IQGDTEWYNIVSWTHYAM 248 + + E ++ T M Sbjct: 235 SKENPELCEKINETLKEM 252 >gi|254975411|ref|ZP_05271883.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile QCD-66c26] gi|255314540|ref|ZP_05356123.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile QCD-76w55] gi|255517215|ref|ZP_05384891.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile QCD-97b34] gi|255650321|ref|ZP_05397223.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile QCD-37x79] gi|260683434|ref|YP_003214719.1| amino acid ABC transporter substrate-binding protein [Clostridium difficile CD196] gi|260687030|ref|YP_003218163.1| amino acid ABC transporter substrate-binding protein [Clostridium difficile R20291] gi|306520288|ref|ZP_07406635.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile QCD-32g58] gi|260209597|emb|CBA63246.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile CD196] gi|260213046|emb|CBE04400.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile R20291] Length = 267 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 39/258 (15%), Positives = 84/258 (32%), Gaps = 16/258 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKR-------GFLKCGINTGLVGFAEVKAN 53 M + I+L S + K + + G + V + Sbjct: 1 MKNILKKVGIFTIMLGLLGGVVGCSKPDNEKDKDASKESKKEVVVGFDNTFVPMGFLDEK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ-IDILSRNTDWTLLREI 112 GD GFDVD + + ++++ P++ + L + +D+L T R+ Sbjct: 61 GDTVGFDVDLAKETFKRLG---MEVKFQPIDWSMKETELNDSKTVDVLWNGYSITDERKK 117 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA--DYFKAHNMK 170 +++ + Q + I+S + L + Q G+T + F Sbjct: 118 I--VSYTEPYLQNKQIIVTLSDSKINSKADLKDKEVGTQQGSTALDAVEKDKDFMNSLKG 175 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 P++++ ++ R A GD + + ++ +L D A Sbjct: 176 GAPVLYDTYDKALRDLEIGRTSAVVGDEVLIR-YYMGQKGEDKYKVLKDDFGLEDYVVAT 234 Query: 231 IQGDTEWYNIVSWTHYAM 248 + + E ++ T M Sbjct: 235 SKENPELCEKINKTLKEM 252 >gi|93005156|ref|YP_579593.1| extracellular solute-binding protein [Psychrobacter cryohalolentis K5] gi|92392834|gb|ABE74109.1| extracellular solute-binding protein, family 3 [Psychrobacter cryohalolentis K5] Length = 266 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 86/270 (31%), Gaps = 18/270 (6%) Query: 3 KDFFVSILCLIILFFTSFST----NASILGDIKKRGF----LKCGINTGLVGFAEVKANG 54 + + SI L + S A D G ++ F A+G Sbjct: 6 RLLWSSITVTAALMLGACSQPANDAADTNADAPAAGTTGKTIRIATEGAYPPFNYTNADG 65 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD+D AL + +K + + + L +++ D + T R Sbjct: 66 SLAGFDIDVANALCEQM---QAKCEIVAQDWDGIIPGLLAQKYDAVIAGMSITAER--QE 120 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F + + ++ K + ++ Q TT L D + Sbjct: 121 KVDFSEPYFANTMVWLTDTKGS-FDPKVIKNLTLGGQRSTTPGAYLQDNY-EGKDGNTVK 178 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQG 233 +++ + ++ R D + + + D P I+ +I + +A A+ +G Sbjct: 179 LYDNYDNAYLDLKSGRSDVVLAEKVSAKSWLA--DNPEGFGIVGDEIDNDDNIAIAVRKG 236 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 D + + E + Q+N Q Sbjct: 237 DAIKEDFNKALNEIRSNGELARLEQQNFGQ 266 >gi|300931332|ref|ZP_07146664.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 187-1] gi|300460837|gb|EFK24330.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 187-1] Length = 260 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 97/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ ++ +++ + L + ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E + +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L E + + + D Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKEFAFAGSSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE + EL ++++K + +V Sbjct: 226 TELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257 >gi|213586572|ref|ZP_03368398.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 232 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 46/219 (21%), Positives = 75/219 (34%), Gaps = 13/219 (5%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 +K+RG L G+ F+ +G GF+VDF AL+ + P Sbjct: 2 KVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVDFAEALAKHLGVKA---SLKPTKWDGM 58 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGA 146 +L SK+ID++ + +R+ F G ++ K I + + L G Sbjct: 59 LASLDSKRIDVVINQVTISDVRKK--KYDFSTPYTVSGVQALVKKGNEGTIKTAADLQGK 116 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + V GT E L + ++ R R DA D L AL L Sbjct: 117 KVGVGLGTNYEEWLRQHV----QGVDIRTYDDDPTKYQDLRVGRIDAILVDR--LAALDL 170 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + D S+ A+ +G+ + V Sbjct: 171 VKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAVDNAI 209 >gi|293396871|ref|ZP_06641145.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] gi|291420342|gb|EFE93597.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] Length = 243 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 83/247 (33%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L I + + ++ F V A+ +GFD Sbjct: 1 MKKLIIAAVLAGISVSAIAAE-------------TIRFATEASYPPFEFVGADNKIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + + + +L+ K+ D + D T RE + F Sbjct: 48 VDLANAMCKEM---QATCTFTNQAFDSLIPSLKFKRFDAVMAGMDITPEREK--QVLFTK 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K ++ V+ L G + VQ GTT + L D + ++ + Sbjct: 103 PYYDNSALFIAQKG-KVADVASLKGKKVGVQNGTTHQKFLTDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + ND + + + L A+ Q +T+ Sbjct: 158 NAILDLKNGRVDAVFGDTAVVNEWLKQNDALTAVGDKVTDKGYFGTGLGIAVRQKNTDLQ 217 Query: 239 NIVSWTH 245 + Sbjct: 218 GKFNAAL 224 >gi|312115327|ref|YP_004012923.1| extracellular solute-binding protein family 3 [Rhodomicrobium vannielii ATCC 17100] gi|311220456|gb|ADP71824.1| extracellular solute-binding protein family 3 [Rhodomicrobium vannielii ATCC 17100] Length = 257 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 87/257 (33%), Gaps = 26/257 (10%) Query: 1 MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K +L L+ L F + +A L+ F+ + A G+ GF Sbjct: 1 MVKASLTRLLALVCLAFLLPLTASAQT--------KLRIATEGTNPPFSIIDARGEVTGF 52 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD +AL + + ++ + + +L +K+ D + + + T + +AF Sbjct: 53 DVDIAKALCAKM---QAECEITEQDWDGIVPSLLAKKYDAVVASLNITE--DRKNVVAFT 107 Query: 120 PITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y F++ K S L+G + VQ T L D + ++ Sbjct: 108 KPYYRSPSVFVVRKGFDAKDVSPKALTGKPVGVQTATNHSAFLED----KYHRSIVRLYN 163 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQ 232 V + A R D D A+Y L I P ++ A+ + Sbjct: 164 TVADAYRDLSAGRVDYVLYDKLAVYDW-LKTPEGQCCEIAPTELADEAYFGSGVGIALRK 222 Query: 233 GDTEWYNIVSWTHYAMV 249 GD + +V Sbjct: 223 GDDALVKRFNDALDGIV 239 >gi|290580725|ref|YP_003485117.1| putative amino acid transporter amino acid-binding protein [Streptococcus mutans NN2025] gi|254997624|dbj|BAH88225.1| putative amino acid transporter amino acid-binding protein [Streptococcus mutans NN2025] Length = 271 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 86/265 (32%), Gaps = 19/265 (7%) Query: 1 MYK--DFFVSILCLIILFF---TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKA 52 M K + I+ ++L S S+ L IK +G + +N F V Sbjct: 1 MKKLKKILLGIIAALMLVALAACSSSSKDDSLQKIKDKGKIVVAMNPEFAPFEFKTLVNG 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G DV+ +A++ + +++ ++ ++QS + DI T R+ Sbjct: 61 KDTIVGADVEIAKAIAKELGVK---VEFSAMSFNNVLSSVQSGKADIGISGISATKERQK 117 Query: 113 SLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 F Y I+ K + + L G S+ Q GT E + Sbjct: 118 V--YDFSDTYYESVNVVIVKKSELAKYKKTNSLKGLSVATQKGTIQETVAKEQL----TG 171 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + E+ ++ + + + ND + I S A A+ Sbjct: 172 AKIVSLVQNGEMINELKSGQVNGVVLEKPIAEGYVAKNDDLAIAQIKLKSSSSDAYAVAM 231 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELG 255 +G + V + A ++ Sbjct: 232 PKGSSALKKKVDKVIKKLKKANKID 256 >gi|91225248|ref|ZP_01260416.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio alginolyticus 12G01] gi|91189887|gb|EAS76159.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio alginolyticus 12G01] Length = 256 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 76/226 (33%), Gaps = 14/226 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + K+ ++ GI F+ + +G KGFDVD AL + K + + + Sbjct: 16 SGVAQAKEWKTVRFGIEGAYPPFSWTETDGSIKGFDVDMANALCEEM---QVKCKIVAQD 72 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +L +++ D + T R+ + F FI K G+ L Sbjct: 73 WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYAQIPNKFIAKKGAGL-DFDNLK 129 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 I VQ TT + L D + + + +E R A GD SAL Sbjct: 130 DVKIGVQRATTHDKYLTDNY---GDDVEIVRYGSFDEAYLDLENGRIAAVLGDASALEEG 186 Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 + + + ++ + A+ + D + + Sbjct: 187 VINKAGGEAYEFVGPSLTDPKWFGEGMGIAVRKQDKDLTKKLDAAI 232 >gi|59711877|ref|YP_204653.1| cyclohexadienyl dehydratase precursor [Vibrio fischeri ES114] gi|59479978|gb|AAW85765.1| cyclohexadienyl dehydratase precursor [Vibrio fischeri ES114] Length = 254 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 40/268 (14%), Positives = 100/268 (37%), Gaps = 17/268 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K C+ +LF SF+ +A L +I++ G ++ G F+ + G+D Sbjct: 2 MKKKLL----CISVLFAASFTAHADRLDEIQEAGIIRVGTTGDYKPFSSFDGK-QFSGYD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + K++ + + K L + + DI + R++ + Sbjct: 57 IDVAKYIAEQL---DVKLELVQTSWKNLIPDLNADKYDIAMGGITRKIQRQLHAEQSQGY 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +T+ K + +++ +++ +S + + + H ++ Sbjct: 114 MTFGKCFLVAKGKAETYNTIDKVNKSSTRLGINIGGTNEI--FADTHLQSATFTRYKNNL 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ A + D + + T+ R E D +KS + +G+ E N Sbjct: 172 DVPQAVATGKVDVMVTETPEALYYQATDKR-LEASRCDDPFTKSQFGYLVPKGEQELLNA 230 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDT 268 V++ +E+ + + + K+ Sbjct: 231 VNFIM------DEMKLKGVDKELMKKNA 252 >gi|33601619|ref|NP_889179.1| putative glutamine-binding periplasmic protein precursor [Bordetella bronchiseptica RB50] gi|33576056|emb|CAE33135.1| putative glutamine-binding periplasmic protein precursor [Bordetella bronchiseptica RB50] Length = 247 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 83/229 (36%), Gaps = 21/229 (9%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + + +A ++ + V +G GFD++ AL+ A+ Sbjct: 19 GAGAAHAQE--------TIRAVTDATFPPMEFV-KDGKRTGFDIELVEALAQAMGKK--- 66 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I+++ ++ K ALQ+ + DI T R+ + F Y G + K + Sbjct: 67 IEWIDIDFKGLIPALQAGRADIAVSAIYITAERQKV--VDFTDPYYAGGLVVLTKKDGPV 124 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S+ L G + VQ GT + L ++F + E+ +E+ + R DA Sbjct: 125 KSLKDLEGRKVSVQVGTKSVNYLKEHFPK----VQRVEVEKNQEMFNLVQIGRADAAVTG 180 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 A KL + +L + I+ A+ + + ++ Sbjct: 181 KP---AAKLFAQSTQDLAVLSEQITTEEYGIAVPKSKSGLTRELNEALK 226 >gi|221218204|ref|YP_002524231.1| ABC amino acid transporter, periplasmic ligand binding protein [Rhodobacter sphaeroides KD131] gi|221163231|gb|ACM04197.1| ABC amino acid transporter, periplasmic ligand binding protein [Rhodobacter sphaeroides KD131] Length = 280 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 88/248 (35%), Gaps = 12/248 (4%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I+K G ++ G+ F +G +G +V+ + + F + + ++ Sbjct: 35 EAIQKAGKIRIGVKCDSPPFGASGPDGKPRGIEVEMAKKIGDYAFGSEEGAELSCVTSEA 94 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R +L + ++D++ T R+ + + I ++ ++ + +S L G S Sbjct: 95 RISSLNAGKLDLIIATLGRTAARQEV--IDYSNIYFWGTSNVLVPADSPVQKLSDLQGRS 152 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + V G T L A+ + + A R D + GD +Y L Sbjct: 153 VLVVKGATQIKWLE----ANIPDISIVQLNTTADGVQALMQGRADGFVGDGGLIYTLGGN 208 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 + ++ + + + +G+TE V+ + + I Q ++ Sbjct: 209 YPK---LRVIEEGLDLGVNGVGMRKGETELQTFVNAVLDELRKGDFYETV---IPQFVEE 262 Query: 268 TTNPDVQR 275 DV + Sbjct: 263 PAVVDVMK 270 >gi|242240915|ref|YP_002989096.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] gi|242132972|gb|ACS87274.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech703] Length = 275 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 77/257 (29%), Gaps = 16/257 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKG 58 M K +++ +L + + L IK +G L I G Sbjct: 1 MKKIMLSALITGALLGSAAHAAI--TLPDSIKSKGELTVAIMPNYPPMEFKDPATNQLMG 58 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D D ++ + I + + ++ A+ +K++D++ T R+ ++F Sbjct: 59 VDYDLGMEMAKKLGVK---INWQEIGFEQMINAVATKRVDMIMSGMTDTQERQKV--VSF 113 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-----NMKYHP 173 Q + + I ++ L G + TT +A + KA+ Sbjct: 114 VDYFSTGPQFYTTTSRSDIKELTDLCGKRVGSSRRTTFPAEIAAWSKANCEAAGKPAIDV 173 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + E + A R R D L + + L S I Sbjct: 174 VGAEGTADARAQLRQRRLDGAVQGSETLPYIMNLEKD--TYKPLGKAFSFQLTGIGIDNK 231 Query: 234 DTEWYNIVSWTHYAMVT 250 D V AM+ Sbjct: 232 DPVLVAAVQAAFNAMIA 248 >gi|218191223|gb|EEC73650.1| hypothetical protein OsI_08176 [Oryza sativa Indica Group] Length = 449 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 94/311 (30%), Gaps = 51/311 (16%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F VS+ L + F S L +T V F + + + GFD Sbjct: 1 MKSIFKVSLAALSLAFAVSSHAA----------DKLVVATDTAFVPFEFKQGD-KYVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 50 IDLWAAVAKELKLDY---TLKPMDFGGIIPALQTKNVDLALAGITITDERKK--AIDFSD 104 Query: 121 ITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G + + + L+G + V++GT + + K F + Sbjct: 105 GYYKSGLLVMVNADNNSVKGIDDLNGKVVAVKSGTGSVDYAKQHIKTK----DLRQFPNI 160 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + T + D + A +G Sbjct: 161 DNAYMELGTKRADAVLHDTPNILYFIKTAGAGK-FKTVGDSLEAQQYGIAFPKGSDALRE 219 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKSS------NIGEAL--- 289 V+ + ++ T ++ +++ G + + G L Sbjct: 220 KVNGALK----------------TLRENGTYNEIYKKWFGTEPKGRQNDPVDFGPRLIGG 263 Query: 290 ---GLTKDWTY 297 GL + Sbjct: 264 LIIGLVAGFAR 274 >gi|70729567|ref|YP_259305.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] gi|68343866|gb|AAY91472.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] Length = 250 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 42/243 (17%), Positives = 80/243 (32%), Gaps = 17/243 (6%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 L + + A LK F V +N GFDVD AL Sbjct: 7 FAGACALVIAASTAQAET---------LKIATEGAYPPFNYVDSNNQLHGFDVDIANALC 57 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + + Q + + + AL +K+ D + + T R+ +AF Y Sbjct: 58 KQMKVE---CQIVAQDWEGIIPALLAKKYDAVVASMIATDERKK--KIAFSNHYYRTPLS 112 Query: 129 FIMHKKKGISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + K I+ G ++ QA +T + D++ + ++E ++ Sbjct: 113 VAVAKDSDITDAQTNFKGRTVGAQASSTQAIYAEDHYGPAGAD--VKFYPTLDEANSDLA 170 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 A R D D L A + + +I + + + A+ + D ++ Sbjct: 171 AGRVDGVIADKFPLLAWAESTGKDCCKIIGDVNGTTADASIAVRKEDNALRERLNKALDE 230 Query: 248 MVT 250 +V Sbjct: 231 IVA 233 >gi|2108229|gb|AAC45332.1| high affinity cystine binding protein [Lactobacillus reuteri] Length = 264 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 69/216 (31%), Gaps = 19/216 (8%) Query: 1 MYKDFFVSILCLIILFFTSFS-------TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M K + ++L + L + + ++++ ++K +G L G+ ++ N Sbjct: 1 MMKFWKKALLTVAALTLGTSAGISSIHAASSAVNSELKNKGELTIGLEGTYSPYSYR-KN 59 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 GF+VD +A++ + +++P L S + D++ N T R Sbjct: 60 NKLTGFEVDLGKAVAKKMGLKA---KFVPTKWDSLVAGLGSGKYDVVMNNITQTPERAK- 115 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F I+ I S+ + G + GT A Sbjct: 116 -QYNFSTPYIKSRFALIVPADSKIKSLKDIKGKKVVAGTGTNNADI------AKKFGAKL 168 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + + R DA A YA N Sbjct: 169 VPNGDFASAVGMIKQGRADAEINSREAWYAYSKKNS 204 >gi|258423136|ref|ZP_05686030.1| polar amino acid ABC transporter [Staphylococcus aureus A9635] gi|257846700|gb|EEV70720.1| polar amino acid ABC transporter [Staphylococcus aureus A9635] Length = 485 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 92/283 (32%), Gaps = 25/283 (8%) Query: 3 KDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51 K IL L +L T+ + IK+RG L+ G++ V Sbjct: 2 KCLIRFILVLGLLISSAMVYINPTAHAEQNQTWEKIKERGELRVGLSADYAPMEFEHTVN 61 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++ G D+D + ++ + K++ + ++ AL++ +IDI+ T R+ Sbjct: 62 GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118 Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + F ++ K + + + Q GT E + Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVSEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228 R+ ++ A ++ + + + A N + +V + + +A Sbjct: 173 NASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + + + ++ T + + N D + Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273 >gi|51596867|ref|YP_071058.1| glutamine ABC transporter periplasmic protein [Yersinia pseudotuberculosis IP 32953] gi|153948725|ref|YP_001400473.1| glutamine ABC transporter periplasmic protein [Yersinia pseudotuberculosis IP 31758] gi|186895948|ref|YP_001873060.1| glutamine ABC transporter periplasmic protein [Yersinia pseudotuberculosis PB1/+] gi|51590149|emb|CAH21786.1| ABC tranporter, periplasmic glutamine-binding protein glnH [Yersinia pseudotuberculosis IP 32953] gi|152960220|gb|ABS47681.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Yersinia pseudotuberculosis IP 31758] gi|186698974|gb|ACC89603.1| cationic amino acid ABC transporter, periplasmic binding protein [Yersinia pseudotuberculosis PB1/+] Length = 247 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 85/251 (33%), Gaps = 22/251 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M VS+ L + F S L +T V F + + + GFD Sbjct: 1 MKSLVKVSLAALTLAFAVSAYAAE---------KELIVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + K P++ ALQ+K +D+ T R+ + F Sbjct: 51 IDLWDAIAKKL---DLKYTLKPMDFSGIIPALQTKNVDLALAGITITDERKK--AVDFSD 105 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I S + L G + V++GT + DY KA+ F + Sbjct: 106 GYYNSGLLVMVKADNNDIKSEADLQGKVLAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + T + + + I A QG ++ Sbjct: 162 DNAYLELGTGRADAVLHDTPNILYFIKTAGNG-QFKAVGESIKAQQYGVAFPQG-SDLRE 219 Query: 240 IVSWTHYAMVT 250 V+ ++ Sbjct: 220 KVNAALKSLKE 230 >gi|329116638|ref|ZP_08245355.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus parauberis NCFD 2020] gi|326907043|gb|EGE53957.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus parauberis NCFD 2020] Length = 270 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 80/253 (31%), Gaps = 17/253 (6%) Query: 2 YKDFFVSILC---LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGD 55 K S++ L+ L S+ S+ IKK G L ++ F Sbjct: 3 KKQILTSVVATMALLSLSACGNSSKESLQDQIKKDGKLVVALSPDYAPFEFKTLQNGKDT 62 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G DV +A++ + ++ P++ ++Q+ + D+ +T R Sbjct: 63 IVGSDVQLAQAIADELGVK---LEISPMSFDNVLSSVQTGKADMAISGISYTEERAKV-- 117 Query: 116 LAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F Y ++ K + ++ L+ + VQ GT E + K+ H Sbjct: 118 YDFSKPYYSTENAILIKASNKNQLQNLDSLANKKVAVQKGTIEEGLSKEQLKS----SHI 173 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + E ++ + DA + N + A A+ +G Sbjct: 174 VSLTAMSEAVNELKSGQVDAVDLEGPVAEGYLAQNPELAIADYKLKTSEGDAKAVAMPKG 233 Query: 234 DTEWYNIVSWTHY 246 E + Sbjct: 234 SKELKATTNKVIT 246 >gi|293410667|ref|ZP_06654243.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli B354] gi|331663826|ref|ZP_08364736.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Escherichia coli TA143] gi|291471135|gb|EFF13619.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli B354] gi|331059625|gb|EGI31602.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Escherichia coli TA143] Length = 260 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ ++ +++ + L + ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E + +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTVDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L + + + + D Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257 >gi|291541188|emb|CBL14299.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Roseburia intestinalis XB6B4] Length = 284 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 34/276 (12%), Positives = 80/276 (28%), Gaps = 37/276 (13%) Query: 1 MYKDFFVSILCLIIL-FFTSFSTNASIL------------------------GDIKKRGF 35 M K +L ++ + +N++ D ++ Sbjct: 1 MKKKVISILLTAVLATGMAACGSNSNTAGNSANNTADNAQNTAETSTESTGSADSAEKPV 60 Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G+ + NG GF+VD A+ + D +Q++ AL + Sbjct: 61 LTVGMEGTYAPYTYHDENGTLTGFEVDMANAIGEKMGYD---VQFVETEWDSITAALDAG 117 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGT 154 D++ T R+ F + I+ I+S ++G + Sbjct: 118 NFDVVMNQVTITDERKE--KFDFSTPYIYSKPVLIVAADNTDINSFEDINGKKAAEGLTS 175 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 +D +++ + ++ + D D K Sbjct: 176 ----NFSDIARSYG--AEIVGQDKFALAMECVLSGEADCAINDELTYAYWKQQKGGEDST 229 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 I+ + + + A + +G+ E ++ ++ Sbjct: 230 KIVAETDNVNSSAIMVKKGNDELIEKLNSAIDELLA 265 >gi|67921185|ref|ZP_00514704.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] gi|67857302|gb|EAM52542.1| extracellular solute-binding protein, family 3 [Crocosphaera watsonii WH 8501] Length = 232 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 51/211 (24%), Positives = 84/211 (39%), Gaps = 10/211 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L L ++ S IL I++ G ++ G F V G+W G+ Sbjct: 1 MKK-ILGMMLSLALVAVPLKSVAEPILQRIERTGTIRAGAWKDAKPFGYVNEKGEWVGYS 59 Query: 61 VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 +D R + S + D P K++ + ++ + ++ +++DI T +T RE + Sbjct: 60 IDIMRVIQSQVETALDKPIKLELVEVDTQNFLDHVRDRKVDISCGPTSFTWNRERY--ID 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F + G ++ K I SV +L I ++A TT E L IV Sbjct: 118 FSISYFVTGTQVLVKKGVTIDSVEELKTKRIGLEANTTNEAVLKTLAP----DLQVIVVN 173 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 + A + D Y GD L ALK Sbjct: 174 SRSDGFAKLQQGVIDGYAGDGILLEALKPRF 204 >gi|306845741|ref|ZP_07478310.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. BO1] gi|306274062|gb|EFM55889.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. BO1] Length = 253 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 83/248 (33%), Gaps = 18/248 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + +I + + ++ ++ F V ++G +G D Sbjct: 1 MLKAIVFAGIASVIAVLPAQA---------REWKEIRIATEGAYPPFNFVASDGSLQGLD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL A+ +K + + L+S + D + + T R+ + F Sbjct: 52 VDIAKALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 106 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + K I+S G ++ Q TT D + ++ Sbjct: 107 KYYSTPLSVAVPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E +A ++ R DA D + + +I +++ A A+ GD + Sbjct: 165 ADEANADLKSGRLDAVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTAVALRLGDNDLR 224 Query: 239 NIVSWTHY 246 + Sbjct: 225 EQFNAAIK 232 >gi|294101063|ref|YP_003552921.1| extracellular solute-binding protein family 3 [Aminobacterium colombiense DSM 12261] gi|293616043|gb|ADE56197.1| extracellular solute-binding protein family 3 [Aminobacterium colombiense DSM 12261] Length = 251 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 88/248 (35%), Gaps = 19/248 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + C+ ++ S A + GI+ ++ + +G GFD Sbjct: 1 MKKIGVLLLCCIFVVLGASNVLAAD-------KKTYIVGIDGDYYPYSFIGQDGKPAGFD 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ + ++ + + ++ P+ AL +K+ID++ T E +AF Sbjct: 54 VESIQWIAKEMGFE---VKVQPMAWDGIIPALLAKKIDMVYSGM--TASPERREVVAFSK 108 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHN--MKYHPIVFE 177 + + Q + + + G +I Q G T + L DY + +++ Sbjct: 109 VYWIINQAVCVRNNTDTNMGNLFDGKHTIGTQRGCTAAMWLEDYVVKTGIIPSQNLKLYD 168 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + + I+ I + A A+ + D E Sbjct: 169 NFPLAAKDLENGRIDAAMMDDVIVA----KAVEGKDMKIIGTISTGEEYAVAMRKEDKEL 224 Query: 238 YNIVSWTH 245 +++++ Sbjct: 225 HDLINEGL 232 >gi|269967640|ref|ZP_06181690.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio alginolyticus 40B] gi|269827727|gb|EEZ82011.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio alginolyticus 40B] Length = 258 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 76/226 (33%), Gaps = 14/226 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + K+ ++ GI F+ + +G KGFDVD AL + K + + + Sbjct: 18 SGVAQAKEWKTVRFGIEGAYPPFSWTETDGSIKGFDVDMANALCEEM---QVKCKIVAQD 74 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +L +++ D + T R+ + F FI K G+ L Sbjct: 75 WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYAQIPNKFIAKKGAGL-DFDNLK 131 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 I VQ TT + L D + + + +E R A GD SAL Sbjct: 132 DVKIGVQRATTHDKYLTDNY---GDDVEIVRYGSFDEAYLDLENGRIAAVLGDASALEEG 188 Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 + + + ++ + A+ + D + + Sbjct: 189 VINKAGGEAYEFVGPSLTDPKWFGEGMGIAVRKQDKDLTKKLDAAI 234 >gi|119946458|ref|YP_944138.1| ABC amino acid transporter extracellular solute-binding protein, family 3 [Psychromonas ingrahamii 37] gi|119865062|gb|ABM04539.1| ABC amino acid transporter extracellular solute-binding protein, family 3 [Psychromonas ingrahamii 37] Length = 258 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 85/254 (33%), Gaps = 25/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L L ++ G+ F++ +A+G GFD Sbjct: 1 MKK--MSMLIALFTLSVNVAQAKQWT--------QIRIGVEGAYPPFSQTEADGSVTGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + D + + AL +++ D + D T R+ + F Sbjct: 51 IDIANALCAEMKAD---CTLIKQDWDGIIPALMARKFDAIVATMDITEERKKRVA--FTN 105 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F K S + ++G + VQ T+ +L ++D + + Sbjct: 106 KYQHIPARFAALKGTEYQASPAFMAGKKVGVQRATSMDLYISDNYPEA----EIKRYGSA 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH----VILPDIISK-SPLAPAIIQGD 234 +E +A R D D +A+ L + + L D A+ Q D Sbjct: 162 DEAYLDLKAGRLDYIMADSAAITGGLLEKEGGDKFELVGPKLNDPKWFGEGAGIAVRQQD 221 Query: 235 TEWYNIVSWTHYAM 248 + + + A+ Sbjct: 222 KDLVDQFNAAIKAI 235 >gi|78358781|ref|YP_390230.1| extracellular solute-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78221186|gb|ABB40535.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 261 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 77/226 (34%), Gaps = 16/226 (7%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L IK+ G + ++ G F + + GFDVD + ++S + + ++P+ Sbjct: 29 DALSRIKEAGEISFAMSGGYPPFNFYNDSNELTGFDVDVAKEVASRLG-----VAFVPVT 83 Query: 85 --AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L+S D + + T R + F Y+ G ++ ++ + Sbjct: 84 TEWSGIIEGLRSGAYDGILGSMAVTPERLKV--VNFSNAYYYSGAQVMVKDSAPYTAPQE 141 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G V GTT A+ + +++ + DA D + Sbjct: 142 LKGKVFGVVTGTTF----AEDAEKLGAG-EVRLYKDDTQTLLELDNGVVDAVITDR--VV 194 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + N +L + +A A +G+ V+ AM Sbjct: 195 GVNAVNSGRFNIRMLGAPLRSENIAVAFRKGEDTLLKEVNAVLAAM 240 >gi|187730169|ref|YP_001881132.1| lysine-arginine-ornithine-binding periplasmic protein [Shigella boydii CDC 3083-94] gi|193062441|ref|ZP_03043536.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E22] gi|193068230|ref|ZP_03049194.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E110019] gi|194429430|ref|ZP_03061953.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli B171] gi|209919810|ref|YP_002293894.1| histidine ABC transporter substrate binding component [Escherichia coli SE11] gi|218695909|ref|YP_002403576.1| lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|256017532|ref|ZP_05431397.1| lysine/arginine/ornithine transporter subunit [Shigella sp. D9] gi|260844897|ref|YP_003222675.1| lysine/arginine/ornithine transporter subunit ArgT, periplasmic-binding component [Escherichia coli O103:H2 str. 12009] gi|260856354|ref|YP_003230245.1| lysine/arginine/ornithine transporter subunit ArgT, periplasmic-binding component [Escherichia coli O26:H11 str. 11368] gi|260869032|ref|YP_003235434.1| lysine/arginine/ornithine transporter subunit ArgT, periplasmic-binding component [Escherichia coli O111:H- str. 11128] gi|293446647|ref|ZP_06663069.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli B088] gi|300818087|ref|ZP_07098299.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 107-1] gi|300822184|ref|ZP_07102326.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 119-7] gi|300903700|ref|ZP_07121615.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 84-1] gi|300918518|ref|ZP_07135111.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 115-1] gi|300924579|ref|ZP_07140541.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 182-1] gi|301303228|ref|ZP_07209353.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 124-1] gi|301328811|ref|ZP_07221856.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 78-1] gi|307311129|ref|ZP_07590773.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli W] gi|331669009|ref|ZP_08369857.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Escherichia coli TA271] gi|331678256|ref|ZP_08378931.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Escherichia coli H591] gi|331683981|ref|ZP_08384577.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Escherichia coli H299] gi|187427161|gb|ACD06435.1| lysine-arginine-ornithine-binding periplasmic protein [Shigella boydii CDC 3083-94] gi|192932107|gb|EDV84706.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E22] gi|192958509|gb|EDV88948.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E110019] gi|194412491|gb|EDX28790.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli B171] gi|195183049|dbj|BAG66609.1| lysine/arginine/ornithine transporter subunit [Escherichia coli O111:H-] gi|209913069|dbj|BAG78143.1| histidine ABC transporter substrate binding component [Escherichia coli SE11] gi|218352641|emb|CAU98422.1| lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|257755003|dbj|BAI26505.1| lysine/arginine/ornithine transporter subunit ArgT, periplasmic-binding component [Escherichia coli O26:H11 str. 11368] gi|257760044|dbj|BAI31541.1| lysine/arginine/ornithine transporter subunit ArgT, periplasmic-binding component [Escherichia coli O103:H2 str. 12009] gi|257765388|dbj|BAI36883.1| lysine/arginine/ornithine transporter subunit ArgT, periplasmic-binding component [Escherichia coli O111:H- str. 11128] gi|291323477|gb|EFE62905.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli B088] gi|300404282|gb|EFJ87820.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 84-1] gi|300414332|gb|EFJ97642.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 115-1] gi|300419210|gb|EFK02521.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 182-1] gi|300525314|gb|EFK46383.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 119-7] gi|300529231|gb|EFK50293.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 107-1] gi|300841402|gb|EFK69162.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 124-1] gi|300844811|gb|EFK72571.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 78-1] gi|306908635|gb|EFN39132.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli W] gi|315061603|gb|ADT75930.1| lysine/arginine/ornithine transporter subunit [Escherichia coli W] gi|315255247|gb|EFU35215.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 85-1] gi|320183766|gb|EFW58600.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Shigella flexneri CDC 796-83] gi|320199901|gb|EFW74490.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Escherichia coli EC4100B] gi|323156461|gb|EFZ42616.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli EPECa14] gi|323161647|gb|EFZ47532.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E128010] gi|323176764|gb|EFZ62354.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli 1180] gi|323184370|gb|EFZ69746.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli 1357] gi|323377816|gb|ADX50084.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli KO11] gi|323944823|gb|EGB40889.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H120] gi|324020832|gb|EGB90051.1| lysine/arginine/ornithine ABC transporter [Escherichia coli MS 117-3] gi|324117812|gb|EGC11711.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1167] gi|331064203|gb|EGI36114.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Escherichia coli TA271] gi|331074716|gb|EGI46036.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Escherichia coli H591] gi|331078933|gb|EGI50135.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Escherichia coli H299] gi|332093390|gb|EGI98448.1| lysine-arginine-ornithine-binding periplasmic protein [Shigella boydii 3594-74] gi|332100892|gb|EGJ04238.1| lysine/arginine/ornithine transporter subunit [Shigella sp. D9] Length = 260 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ ++ +++ + L + ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E + +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L + + + + D Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257 >gi|307296217|ref|ZP_07576045.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|306496091|gb|EFM65673.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|315159996|gb|EFU04013.1| ABC transporter, permease protein [Enterococcus faecalis TX0312] Length = 722 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 80/236 (33%), Gaps = 14/236 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ ++++ +F ++ S + KK G + F + G + G D Sbjct: 1 MKRKHFLLSFFVMMVTLLTFISSTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + + PL A+QSKQID + T R+ F Sbjct: 58 VDLLDAIAKDQGFE---VDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKK--SFDFSD 112 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K I S L G ++ + GT + L Y F+ Sbjct: 113 PYFDSGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKN--KEKYDYTIKNFDDA 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + A DA D L + ++ D + S A+ +G Sbjct: 171 TGLYKALENGEADAIVDDYPV---LGYAVKNGQKLQLVGDKETGSSYGFAVKKGQN 223 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 76/241 (31%), Gaps = 13/241 (5%) Query: 18 TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ + I K+ ++ F A GD+ G DVD + ++ + Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQGDYVGIDVDLVKR-AAELQG--F 313 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135 +++ + A++S Q D + T R+ F + G + K Sbjct: 314 TVEFKFIGFSSAVQAVESGQADGMVAGMTITDDRKK--AFDFSVPYFDSGIQIAVKKGND 371 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L G + V+ GT + L Y + + + +A DA Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAMM 429 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254 D + + ++P I + A+ + + E + + M E Sbjct: 430 DDYPVI-GYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486 Query: 255 G 255 Sbjct: 487 D 487 >gi|301630377|ref|XP_002944298.1| PREDICTED: histidine-binding periplasmic protein-like [Xenopus (Silurana) tropicalis] Length = 253 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 74/220 (33%), Gaps = 13/220 (5%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 + G+N F A G+ GFDVD AL + I K ++ LQ+K+ Sbjct: 23 RVGLNPAYEPFESKTATGEIVGFDVDIINALCAQI---QRKCVFVESEWDSIIPGLQAKK 79 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 D++ + T R + F Y ++ K + L G I V G+T Sbjct: 80 YDVIVSSMSITPERARV--VDFSNRYYKTPSAIVVKKGTKYDGPASLKGMKIGVLKGSTQ 137 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 E K + + ++ ++ +A R D D ++ L + Sbjct: 138 EKWALGELKPAG--VNVVPYQSQNQVYLDIKAGRLDGTVADKVEVHGGFLRKPEGQDFGY 195 Query: 217 L-----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 + + A+ +G E ++ A + A Sbjct: 196 VGADQYDPKYYGEGIGIALRKGQGELKKQLNDAI-ATIRA 234 >gi|327193816|gb|EGE60693.1| amino acid ABC transporter substrate-binding protein [Rhizobium etli CNPAF512] Length = 321 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 81/233 (34%), Gaps = 13/233 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L I L+C + FA + GFDVD C A++ + P+ Sbjct: 67 DQLDTIMSAKTLRCATFADVPPFASPDPKTREMAGFDVDLCGAIAKELGVKAE---IKPV 123 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + + R ++ ++DI N +TL R + F Y + I+ + + Sbjct: 124 SVEARVPEVKLGRVDITVANLAYTLSRAEQIQ--FSDPYYLAKEMLIVPADDAGKTKADY 181 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 +G I G+T+E+++ K P+ F+ A + + + Sbjct: 182 AGQRIASTKGSTSEMSI------KLNKSEPLTFQDTASAYLAVQQGKARGMVANTMTTTK 235 Query: 204 LKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + E ++ + + P+ + + V+ + + + E+ Sbjct: 236 FVNESKSKGKEMRMIEEPMLYQPIGIGMAKDQPALTAKVNEILHKLDESGEIN 288 >gi|323967751|gb|EGB63163.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli M863] gi|323977489|gb|EGB72575.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TW10509] gi|327252581|gb|EGE64240.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli STEC_7v] Length = 260 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ ++ +++ + L + ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSILALSL---LVGISAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E D +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANDNWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L + + + + D Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGPSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257 >gi|73541284|ref|YP_295804.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72118697|gb|AAZ60960.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 252 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 78/244 (31%), Gaps = 19/244 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + LI L F + + L+ + + NG GFDV Sbjct: 5 RKCLMAGLTALIGLTFGAAAHAED-------NAVLRVATDATFPPMEFI-ENGKRTGFDV 56 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + A++ + ++++ ++ K L S++ D+ T R + P Sbjct: 57 ELVEAMAKTMGK---RVEWTDIDFKGLIPGLVSRRFDMAVSGIYITPERRKVVDFT-EPY 112 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + I + + L+G + VQ GT + L D + + + E+ +E Sbjct: 113 YTGGLVALVKSGNTTIHAPADLNGKKVSVQVGTKSVSFLRDTYP----QVQRVEVEKNQE 168 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + R DA A T ++ ++ A+ + E + Sbjct: 169 MFNLVEIGRADAAVTGKPAAMQYVKTRGG---LRMVEQPLTTEEYGMAVRKDMPELTRAL 225 Query: 242 SWTH 245 + Sbjct: 226 NAAL 229 >gi|238795810|ref|ZP_04639323.1| Arginine-binding periplasmic protein 2 [Yersinia mollaretii ATCC 43969] gi|238720273|gb|EEQ12076.1| Arginine-binding periplasmic protein 2 [Yersinia mollaretii ATCC 43969] Length = 243 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 83/250 (33%), Gaps = 25/250 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +I L + F++ + ++ + F + AN + GFD Sbjct: 1 MKKLLLATI--LSGMVFSATAAE-----------TIRFAASATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + AL+ K+ D + D T R + F Sbjct: 48 MDLAKALCKQM---EANCTFTNQAFDSLIPALKFKRYDAVISGMDITPERSKQVA--FTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K SS + L G I ++ GTT + L D + ++ + Sbjct: 103 PYYANSAIVIAPKG-KFSSFADLKGKKIGMENGTTHQKYLQDKHPE----IQTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + TN + + L A+ +T Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPNLASVGEHVTDPQYFGTGLGIAVRPDNTALL 217 Query: 239 NIVSWTHYAM 248 ++ A+ Sbjct: 218 EKLNKAIDAV 227 >gi|295112703|emb|CBL31340.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Enterococcus sp. 7L76] Length = 190 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 72/184 (39%), Gaps = 19/184 (10%) Query: 1 MYK--DFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGL 44 M K + + L++ ++ S + +KK G +K G+ + Sbjct: 1 MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTVTVEQLKKAGKIKVGVKEDI 60 Query: 45 VGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F + + +G + D R ++ I ++++ + AK R L + ++D++ Sbjct: 61 PNFGYMNPDTNKNEGMEPDIARLIAKEITGSEENVEFVGVTAKTRGPLLDNGELDMVIAT 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + F Y D GF++ K+ SS+ L G +I V TT+ L Sbjct: 121 FTITDERKKT--YNFTTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKK 178 Query: 164 FKAH 167 K Sbjct: 179 RKRK 182 >gi|224826830|ref|ZP_03699930.1| cationic amino acid ABC transporter, periplasmic binding protein [Lutiella nitroferrum 2002] gi|224601050|gb|EEG07233.1| cationic amino acid ABC transporter, periplasmic binding protein [Lutiella nitroferrum 2002] Length = 256 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 85/254 (33%), Gaps = 24/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L + K ++ G++ F A+G GFD Sbjct: 1 MKKLALTVCLALASSGVFA-----------KDWKVIRFGVDASYAPFESKAADGKLTGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +K ++ + AL++K+ D + T R + F Sbjct: 50 IDLGNAICEKL---KAKCVWVENDFDGMIPALKAKKFDGILSALSVTEKRAEQIA--FSD 104 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K + + L G I V+ G+T E +++ + + ++ Sbjct: 105 KMYNSPVRMIAKKGAPLQPTPESLRGKRIGVEQGSTQEAYAKAHWEPKG--VNVVPYQNQ 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + + R DA D L R + ++ + + A + + D Sbjct: 163 DLVLSDLVSGRLDASLQDAVQADVGFLRTARGNGFAFAGPEVNDAKILGTGTAIGLRKDD 222 Query: 235 TEWYNIVSWTHYAM 248 + ++ A+ Sbjct: 223 ADLRQQINQALAAI 236 >gi|110642514|ref|YP_670244.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli 536] gi|191169972|ref|ZP_03031526.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli F11] gi|218690470|ref|YP_002398682.1| lysine/arginine/ornithine ABC transporter subunit periplasmic-binding protein [Escherichia coli ED1a] gi|227887368|ref|ZP_04005173.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Escherichia coli 83972] gi|300980888|ref|ZP_07175234.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 200-1] gi|301049068|ref|ZP_07196052.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 185-1] gi|306814578|ref|ZP_07448740.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli NC101] gi|331647965|ref|ZP_08349057.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Escherichia coli M605] gi|110344106|gb|ABG70343.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli 536] gi|190909488|gb|EDV69073.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli F11] gi|218428034|emb|CAR08805.1| lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli ED1a] gi|227835718|gb|EEJ46184.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Escherichia coli 83972] gi|281179396|dbj|BAI55726.1| histidine ABC transporter substrate binding component [Escherichia coli SE15] gi|300299115|gb|EFJ55500.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 185-1] gi|300307701|gb|EFJ62221.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 200-1] gi|305851972|gb|EFM52424.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli NC101] gi|307554371|gb|ADN47146.1| lysine-, arginine-, ornithine-binding periplasmic protein [Escherichia coli ABU 83972] gi|324006680|gb|EGB75899.1| lysine/arginine/ornithine ABC transporter [Escherichia coli MS 57-2] gi|324013188|gb|EGB82407.1| lysine/arginine/ornithine ABC transporter [Escherichia coli MS 60-1] gi|330912133|gb|EGH40643.1| lysine-arginine-ornithine-binding periplasmic protein precursor [Escherichia coli AA86] gi|331043689|gb|EGI15827.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Escherichia coli M605] Length = 260 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ ++ +++ + L + ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E + +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L + + + + D Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGPSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257 >gi|288555161|ref|YP_003427096.1| glutamine ABC transporter substrate-binding protein [Bacillus pseudofirmus OF4] gi|288546321|gb|ADC50204.1| glutamine ABC transporter substrate-binding protein [Bacillus pseudofirmus OF4] Length = 267 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 87/260 (33%), Gaps = 22/260 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIK--------KRGFLKCGINTGLVGFAEVKA 52 M K ++ S++ +L + + + +R + V F + Sbjct: 1 MKKSYWKSVVFGGLLLVATACGSEDTSSEADNGAAAEDGERESYVVATDNAYVPFEFLDE 60 Query: 53 -NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G+ GFD+D A++ D I++ + + S + DI T R+ Sbjct: 61 ETGELVGFDIDLMTAIAEEAGFD---IEFEAMEFDGIVAGIGSGRFDIGIAGMTITEERK 117 Query: 112 ISLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + F Y G + I+SV L G + + G+T+E + + N Sbjct: 118 E--NIDFSQPYYDAGLIVAVHADNDEINSVDDLDGKVVATRTGSTSETYIRE-----NTG 170 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 P F ++ E R DA DI + + + + + ++ A Sbjct: 171 GTPEAFPQITEAYQNVIQGRADAVIYDIP-NVQYYASTEGGGQLKTVGEALTGEEYGIAF 229 Query: 231 IQGDTEWYNIVSWTHYAMVT 250 +G +E +I + Sbjct: 230 PKG-SELRDIADEALTTLKE 248 >gi|256964404|ref|ZP_05568575.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis HIP11704] gi|307272573|ref|ZP_07553826.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|256954900|gb|EEU71532.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis HIP11704] gi|306510858|gb|EFM79875.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] Length = 722 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 79/236 (33%), Gaps = 14/236 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ ++++ +F + S + KK G + F + G + G D Sbjct: 1 MKRKHFLLSFFVMMVTLLTFISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + + PL A+QSKQID + T R+ F Sbjct: 58 VDLLNAIAKDQGFE---VDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKK--SFDFSD 112 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K I S L G ++ + GT + L Y F+ Sbjct: 113 PYFDSGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKS--KEKYDYTIKNFDDA 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + A DA D L + ++ D + S A+ +G Sbjct: 171 TGLYKALENGEADAIVDDYPV---LGYAVKNGQKLQLVGDKETGSSYGFAVKKGQN 223 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 76/241 (31%), Gaps = 13/241 (5%) Query: 18 TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ + I K+ ++ F A GD+ G DVD + ++ + Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQGDYVGIDVDLVKR-AAELQG--F 313 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135 +++ + A++S Q D + T R+ F + G + K Sbjct: 314 TVEFKFIGFSSAVQAVESGQADGMVAGMTITDDRKK--AFDFSVPYFDSGIQIAVKKGND 371 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L G + V+ GT + L Y + + + +A DA Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAMM 429 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254 D + + ++P I + A+ + + E + + M E Sbjct: 430 DDYPVI-GYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486 Query: 255 G 255 Sbjct: 487 D 487 >gi|111657052|ref|ZP_01407848.1| hypothetical protein SpneT_02001717 [Streptococcus pneumoniae TIGR4] Length = 274 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 35/248 (14%), Positives = 78/248 (31%), Gaps = 13/248 (5%) Query: 5 FFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 V + + LF + T+ + + G ++ V + +G + GF Sbjct: 1 MLVLVSLMTALFLVACGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGSYAGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D A+ + + P++ + L ID++ T R +AF Sbjct: 61 DIDLATAVFEKYG---ITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDER--REKVAFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM---KYHPIVF 176 + Q + K GI++ ++G ++ QAG++ + + Sbjct: 116 NSYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEANPEILKNIVANKEANQY 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + E + R D D +++ + + A + DT Sbjct: 176 QTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARKEDTN 235 Query: 237 WYNIVSWT 244 ++ Sbjct: 236 LVKKINEA 243 >gi|306836971|ref|ZP_07469921.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium accolens ATCC 49726] gi|304567154|gb|EFM42769.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium accolens ATCC 49726] Length = 339 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 84/223 (37%), Gaps = 15/223 (6%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 DI KRG L G++ + A +GD +GF+VD ++ IF DP+K+ + + + + Sbjct: 89 DIVKRGRLIVGVDRSNNLLSYRDAASGDVRGFEVDIAHEIARDIFGDPNKVDFRFVESSD 148 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R AL + +DI+ R + RE + F ++ G++S+ G Sbjct: 149 RTAALDNGTVDIIVRTMTISPEREKEVA--FSIPYMTTQTRMLVLTSSGMNSIDDADGKR 206 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C G+T D + + ++ + A + ++ D D + L + Sbjct: 207 LCGVRGSTAL----DTIRERAPRSDILITRSWGDCLMALQLNQADGVVVDDALLSGMAAQ 262 Query: 208 NDRPSEHVILPDIISKSPLAPAII-----QGDTEWYNIVSWTH 245 + I+ + + A V+ T Sbjct: 263 DS---YTSIVGEPLKTENYGVAARLPNKDHDTRPLLRQVNSTL 302 >gi|253689166|ref|YP_003018356.1| cationic amino acid ABC transporter, periplasmic binding protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755744|gb|ACT13820.1| cationic amino acid ABC transporter, periplasmic binding protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 259 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 96/279 (34%), Gaps = 29/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V L LI+ S + +I K +K G + F A+G+ GFD Sbjct: 1 MKKLIKVLPLALIL-------AAGSAMAEIPKN--IKIGTDPTYAPFESKNASGELVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + L I + ++ + +L++K+ID + + T R +AF Sbjct: 52 IDLAKELCKRI---QANCTFVESDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFTE 106 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I +++ L G + V +T E ++ + ++ Sbjct: 107 KLYAANARLIAKKGASIEPTLASLGGKRVGVLQASTQEAFANANWQPKG--VEVVAYQNQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I A A R DA D A L D ++ + + + D Sbjct: 165 DLIYADLTAGRIDAAFQDEVAGSEGFLKLDMGKDYAFAGPAVKDDKFFGVGTGMGLRKAD 224 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE + EE+ + +K + DV Sbjct: 225 TELKAALDKAF------EEMRKDGT-YDTFAKKYFDFDV 256 >gi|13474012|ref|NP_105580.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Mesorhizobium loti MAFF303099] gi|14024764|dbj|BAB51366.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Mesorhizobium loti MAFF303099] Length = 257 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 76/250 (30%), Gaps = 18/250 (7%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F + + T S AS L+ G F A+G GFD+D Sbjct: 2 RLFGRFVLAASVALTLASGAASAQDK------LRIGTEGAYPPFNYANADGTLGGFDIDL 55 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 +AL + + ++ ++ + ALQ+ + D + T+ E + + F Y Sbjct: 56 GKALCAEM---KAECEFTVQDFDGSIPALQAGKFDAIIN---ITITPERAEKVEFTHKYY 109 Query: 124 FDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + K I +S L G ++ VQ T + + + ++ Sbjct: 110 QTPPAITVPKDSTIAGTSPDDLKGKALGVQTATIH----QKFAEQKYSGSTVKAYPTGDD 165 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 R DA L D ++ + P + + + Sbjct: 166 ARTDMANGRLDAMMDGSIILTEWLKKPDGACCKLLGTLTADPAIHGPGVGIALQKGNKEL 225 Query: 242 SWTHYAMVTA 251 + A + A Sbjct: 226 AGKFNAAIDA 235 >gi|108799122|ref|YP_639319.1| extracellular solute-binding protein [Mycobacterium sp. MCS] gi|119868237|ref|YP_938189.1| extracellular solute-binding protein [Mycobacterium sp. KMS] gi|126434728|ref|YP_001070419.1| extracellular solute-binding protein [Mycobacterium sp. JLS] gi|108769541|gb|ABG08263.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. MCS] gi|119694326|gb|ABL91399.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. KMS] gi|126234528|gb|ABN97928.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. JLS] Length = 275 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 79/246 (32%), Gaps = 16/246 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G G +G GFDVD ++ + P +I++ + +R +Q+ Sbjct: 38 TIVIGTKFDQPGLGLRNPDGSMSGFDVDVATYVAGELGYTPEQIEWKESPSGQRETLIQN 97 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--LSGASICVQA 152 Q+D + T R+ + F GQ ++ + + + +C + Sbjct: 98 DQVDYIVATYSITDSRKE--KVDFAGPYLITGQSLLVRNDNTDITGAASLANNKRLCSVS 155 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T + D + ++ A + DA T D L P Sbjct: 156 GSTPAQKIKDEYP----GVQLQQYDTYSACIEALKNGAIDAVTTDEVILAGYAAQ--TPG 209 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY------AMVTAEELGITQKNINQVSK 266 I+ D S+ + + D+E ++ A A + + I + Sbjct: 210 AFKIVGDTFSEERYGVGLKKDDSELRAKINAAIEKMESSGAWKEAFDKNLGPAGITAPTP 269 Query: 267 DTTNPD 272 + + Sbjct: 270 PPVDSN 275 >gi|227114003|ref|ZP_03827659.1| putative cystine-binding periplasmic protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 255 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 71/246 (28%), Gaps = 15/246 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F L L TS +A L IK G +K G + +G GFD Sbjct: 1 MKKIRF--ALLTSALLATSVFAHADDLSAIKSAGVIKFGTEGTYAPYTYHDKSGQLVGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RA++ + I+ + +K+ D + T R + F Sbjct: 59 VDIGRAVAEKLGVKAQFIEGR---WDGLIAGIDAKRYDAVINQVGVTKER--QVKYDFSK 113 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ + S L G Q+ T+ A + A + + Sbjct: 114 PYIDSKAVLVVRGDNTTLKDFSDLKGKKSA-QSLTSNYSKQATSYGA-----DIVPTDGF 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R DA D + K I P A + + Sbjct: 168 NQSLDLVLSGRADATLNDNLSFLDFKKHKPDA-NVKIAATSKDGEPSAILVRKNQAPLVE 226 Query: 240 IVSWTH 245 ++ Sbjct: 227 ALNKAL 232 >gi|239816640|ref|YP_002945550.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239803217|gb|ACS20284.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 266 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 40/247 (16%), Positives = 88/247 (35%), Gaps = 10/247 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + +++ + +L + + L ++ K +K + T + V N +G DV Sbjct: 7 KRHLSLALASVAMLAAAGGAQAQNALDNVLKAKTIKIAVPTDYPPYGSVDRNMKPQGLDV 66 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + +++ + ++ +P+ + R LQ+++ D++ RE + F Sbjct: 67 EMAELIAAKLGVK---VELVPVTSANRIPYLQTRKADLVISTLGKNPEREKV--IDFSAA 121 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Q K ++S + ++G ++ V G + L + FE Sbjct: 122 YAPFFQAVYAAKSMKLTSFADMAGKTVAVTRGAMEDQELNKVAPPN---VDYRRFEDNNA 178 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AA+ A + SA A + P ++ SP + +G+T V Sbjct: 179 TIAAFVAGQTQTLAT--SAAVAGDMLAKNPKVSAEFKLLLKDSPCFVGVAKGETALKTKV 236 Query: 242 SWTHYAM 248 + A Sbjct: 237 NEIIAAA 243 >gi|320155821|ref|YP_004188200.1| amino acid ABC transporterperiplasmic amino acid-binding protein [Vibrio vulnificus MO6-24/O] gi|319931133|gb|ADV85997.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio vulnificus MO6-24/O] Length = 256 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 80/226 (35%), Gaps = 14/226 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + K+ ++ GI F+ +A+G KGFDVD AL + + + + + Sbjct: 16 SGIAQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCEEM---KVQCKIVAQD 72 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +L +++ D + T R+ + F FI K G++ LS Sbjct: 73 WDGIIPSLLARKYDAIIAAMSITEERK--QKVDFTGKYALIPNKFIAKKGAGLNFDK-LS 129 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G I VQ TT + L D + + + + +E R A GD SAL Sbjct: 130 GVKIGVQRATTHDKYLTDNYGKN---VDIVRYGSFDEAYLDLANGRIAAVLGDASALEEG 186 Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 L + + ++ A+ + D + + Sbjct: 187 VLNKAGGEGYEFVGPSLTDPKWFGEGFGIAVRKQDKDLTKQLDAAI 232 >gi|227327250|ref|ZP_03831274.1| histidine-binding periplasmic protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 259 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 97/279 (34%), Gaps = 29/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V L LI+ S + +I K +K G + F A+G+ GFD Sbjct: 1 MKKLIKVLPLALIL-------AAGSAMAEIPKN--IKIGTDPTYAPFESKNASGELVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + L I + ++ + +L++K+ID + + T R +AF Sbjct: 52 IDLAKELCKRI---QANCTFVESDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFTE 106 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I +++ L G + V +T E ++ + + ++ Sbjct: 107 KLYAANSRLIAKKGASIEPTLASLGGKRVGVLQASTQEAFANANWQPKGVD--VVAYQNQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I A A R DA D A L D E+ + + + D Sbjct: 165 DLIYADLAAGRIDAAFQDEVAASEGFLKLDAGKEYEFAGPAVKDDKFFGVGTGMGLRKAD 224 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE + EE+ + +K + DV Sbjct: 225 TELKAALDKAF------EEMRKDGT-YDTFAKKYFDFDV 256 >gi|301300408|ref|ZP_07206610.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852010|gb|EFK79692.1| bacterial extracellular solute-binding protein, family 3 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 291 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 36/255 (14%), Positives = 79/255 (30%), Gaps = 17/255 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKC-----------GINTGLVGFAEVK 51 K I CL+ + + G G++ V + Sbjct: 8 KKIVKIITCLLAFLIVGATLAGCTNVRKRANGQDNWKKIEKKKKVVIGLDDSFVPMGFRE 67 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G GFDVD R + D + + ++ + L++ ID++ R+ Sbjct: 68 KDGSLVGFDVDLAREVFKRYGID---VDFQTIDWSMKETELRNGTIDLIWNGYTVNPERK 124 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT-TELTLADYFKAHNMK 170 ++ F + Q + KK+ + + G ++ +Q+G++ E ++ N Sbjct: 125 KTVA--FSVPYLRNQQVLVSKKKENVYDAKSMKGKALGLQSGSSGYESYMSQPKLLKNYV 182 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + ++ A+R D P+ + I A + Sbjct: 183 KETVQYDTFNNAFLDLNANRIQGLLIDSVYADYYVAHEPDPNSYRISDVGFESENFAVGM 242 Query: 231 IQGDTEWYNIVSWTH 245 +GD ++ Sbjct: 243 RKGDKTLQKKINMAL 257 >gi|296110977|ref|YP_003621358.1| glutamine ABC transporter, substrate binding protein [Leuconostoc kimchii IMSNU 11154] gi|295832508|gb|ADG40389.1| glutamine ABC transporter, substrate binding protein [Leuconostoc kimchii IMSNU 11154] Length = 288 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 95/252 (37%), Gaps = 19/252 (7%) Query: 4 DFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58 +++ L +++ T+ + + L ++K G + G+ F + G +G Sbjct: 15 IVLAAVIVLGLMWATATAKKNEEHQDTLARVEKLGRIVWGVKADTRLFGLMDTKTGISQG 74 Query: 59 FDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 FD+D RA++ I P +++P+++ + +++ ID T+ E Sbjct: 75 FDIDIARAITVQISKQTGVPMSAEFVPVSSSSKMQLIKNTNIDGSVS--TMTITPEREKI 132 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + GQ ++ K GI S+ ++ +I V GTT L + M Sbjct: 133 IDFTNQYFDAGQSILVKKDSGIRSIKDMNDSKYTIIVVVGTTAATELKKFAPKAKM---- 188 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + A ++ + A + D + LY N E+ I + + P A Sbjct: 189 LAVQDYATGMQALKSGQGQAMSTDNAILYGFATENP---EYHIAGEAFTHGPYGIAFDNN 245 Query: 234 DTEWYNIVSWTH 245 + + Sbjct: 246 QKPMIDETNKAL 257 >gi|292656558|ref|YP_003536455.1| putative glutamine ABC transporter periplasmic substrate-binding protein [Haloferax volcanii DS2] gi|291371439|gb|ADE03666.1| ABC-type transport system periplasmic substrate-binding protein (probable substrate glutamine) [Haloferax volcanii DS2] Length = 297 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 72/234 (30%), Gaps = 26/234 (11%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G + F GD GFDVD A+ ++ P + +L + Sbjct: 58 TITIGSDIPYRPFEYETIEGDLTGFDVDIAEAVFDGQLG--IDYEFKPTSFDSIIPSLNN 115 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 I+ R + + F + Q I+ + I S L G ++ VQ GT Sbjct: 116 NNFRIIMSAMTINDQR--AQEVDFSDPYFTAYQTVIVRQDSDIQSREDLRGTTVGVQKGT 173 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY------------ 202 T + + + + +++V A + A D + Sbjct: 174 TGADAALELQEEFDGELELNQYDQVTGAFQALVNGQVVAVINDNTVNAEFVNNQGEGEVR 233 Query: 203 ------ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A + + +++ L + A Q D E+ V+ A+ Sbjct: 234 FLQGEGAAAESGENAPDYLTL----TVENYGIAFRQDDDEFRQRVNEALAAIKE 283 >gi|118471525|ref|YP_887548.1| amino acid ABC transporter [Mycobacterium smegmatis str. MC2 155] gi|118172812|gb|ABK73708.1| ABC-type amino acid transport system, secreted component [Mycobacterium smegmatis str. MC2 155] Length = 295 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 86/288 (29%), Gaps = 39/288 (13%) Query: 1 MYKDFFVSILCLIILFFTSFSTN----------------------ASIL-GDIKKRGFLK 37 M++ F V + L ++ ++ A+ L DIK G L Sbjct: 1 MWR-FAVVLAASGALTLSACASGEGGGESSPESTQAASGAKVDEIANTLPEDIKSSGKLI 59 Query: 38 CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 G+N +G GFDVD A+++ + P Y + + ++Q Sbjct: 60 VGVNIPYAPNEFKDPSGKIVGFDVDLMNAVAATLGLTPE---YREADFAKIIPSIQGGTF 116 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 ++ + T RE + F TYF + G G + VQA T E Sbjct: 117 NVGMSSFTDTKERE--QSVDFV--TYFSAGSLWAQRVGGGIDPENACGKKVAVQATTVQE 172 Query: 158 -----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 A + F+ + A + DA + D L Sbjct: 173 TDELPARSKKCTDAGQPAIEIVPFDGQDAATNAVVLGQVDAMSADSP--VTLYAIKQSNG 230 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 + ++ +P + +G + ++ E N Sbjct: 231 KLEKAGEVFDSAPYGWPVAKGSP-LAQSLQQALQHLIDNGEYEKIAAN 277 >gi|306831677|ref|ZP_07464834.1| amino acid ABC superfamily ATP binding cassette transporter periplasmic protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426102|gb|EFM29217.1| amino acid ABC superfamily ATP binding cassette transporter periplasmic protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 271 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 83/253 (32%), Gaps = 16/253 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGD-IKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K F IL +I+ ++ S++ + I+ +G + + F + Sbjct: 1 MKKFFRGFILLIIVGSLSACSSSTGVSQSSIQDKGKIVIATESEFAPFEFKTLIDGKDTL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ A++ A+ D + ++ ++ S + DI T R+ Sbjct: 61 VGADIELGNAIADALGVDAD---FSVMSFNNVLASVTSGKADIAIAGISVTDERKK--AY 115 Query: 117 AFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K +++ L+G ++ Q G+ E D + Sbjct: 116 DFSDAYYEAENIVIIKKSDEATYTTLESLAGKAVGTQKGSIQENIAKDQLP----DSSLV 171 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E+ + ++ A + + ND + + A A +G Sbjct: 172 SLTSNGEMINELKNNQLQAVVLEKAIAEGYVSQNDDLMIADMTLESSDTDAYAVAFAKGT 231 Query: 235 TE-WYNIVSWTHY 246 + + V+ Sbjct: 232 DQDLIDTVNDVIK 244 >gi|92112667|ref|YP_572595.1| extracellular solute-binding protein [Chromohalobacter salexigens DSM 3043] gi|91795757|gb|ABE57896.1| amino acid ABC transporter substrate-binding protein, PAAT family [Chromohalobacter salexigens DSM 3043] Length = 261 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 91/249 (36%), Gaps = 16/249 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGF 59 M K +++ + + S +++ + LK GI+ F A+G W GF Sbjct: 1 MIKQLKATLMQATGIVLLALSATSAMADE-----PLKIGISAEPYPPFTYKDADGSWTGF 55 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +V+ +A+ + + + + P F AL S +ID++ + T R+ + F Sbjct: 56 EVELGQAICAQM---DAACEITPTGWSGIFPALNSGKIDMIMNSLSITEKRKRVIA--FS 110 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 YF ++ K + L G + VQ TT V+++ Sbjct: 111 DPYYFTPSAYVTAKANDMQIPEDLDGKILGVQGSTTNATFARRSLADTG--VELKVYDQQ 168 Query: 180 EEIDAAYRAHRCDAYTGDISAL--YALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTE 236 E+ + A R DA D A+ + + + I P D + + + Q D Sbjct: 169 EQANRDLLAGRVDAILADEIAMTEFVERDSAQDFEIRAIAPRDDAFGNGVGIGLRQEDDA 228 Query: 237 WYNIVSWTH 245 + ++ Sbjct: 229 LRDKLNAAI 237 >gi|71736303|ref|YP_277028.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556856|gb|AAZ36067.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 254 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 80/255 (31%), Gaps = 27/255 (10%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 YK + + ++F+ +K GI F A+G GFD Sbjct: 4 YKKILLIAAATLAFSGSAFAE------------TMKMGIEGAYPPFNNKDASGQVVGFDY 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + +AL + + + + + AL + + D L + T R+ + F Sbjct: 52 EIGQALCARMKVECEAVT---SDWDGIIPALMANKFDFLISSLSITEERK--QVVDFTNP 106 Query: 122 TYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 Y + FI K I + L+G S+ Q T L D + Sbjct: 107 YYSNKLQFIAPKTSSIDVSSTEKAKESLAGKSVGAQRSTLAATWLEDKLG----IMDVKL 162 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ E + R DA D + + + ++ + A+ +GD Sbjct: 163 YDTQENAFLDLSSGRVDAMLADKYVSFEWLKSEAGQNFEFKGEPVVEDDKIGIAVRKGDD 222 Query: 236 EWYNIVSWTHYAMVT 250 ++ ++ Sbjct: 223 ALRERLNAALKEIIA 237 >gi|320322170|gb|EFW78266.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. B076] Length = 261 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 82/244 (33%), Gaps = 10/244 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + +A+ L D+ RG LK + F V + +G D+D + L+ + Sbjct: 17 MLSQTPAHANGLDDVVARGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAQLLADQL---K 73 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K++ P+N+ R L + ++D++ + RE + F Sbjct: 74 VKLELTPVNSTNRIPFLTTGKVDLVISSLGKNPDREKV--IDFSRAYAPFYLAVFGPPDS 131 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + ++ L G +I V G ++ L+ FE AAY A + Sbjct: 132 PVKDIADLKGKTISVTRGAIEDIELSKVAPE---GATIKRFEDNNSTIAAYLAGQTGLIA 188 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + A ++ P L + SP+ + +G E V A L Sbjct: 189 SGNVVMAA--ISERNPKRIPALKVKLKDSPVYVGVNKGQPELLGKVDEILNAAKADGALE 246 Query: 256 ITQK 259 + Sbjct: 247 KASQ 250 >gi|170780722|ref|YP_001709054.1| putative extracellular solute-binding transport protein [Clavibacter michiganensis subsp. sepedonicus] gi|169155290|emb|CAQ00393.1| putative extracellular solute-binding transport protein [Clavibacter michiganensis subsp. sepedonicus] Length = 327 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 74/233 (31%), Gaps = 15/233 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD--WKGFDVDFCRALSSAIFD 73 + A+ L D+K +G L G F+ + +G G+DV+ A++ + Sbjct: 84 GTSGTPAAATSLSDVKAKGELVIGTEGTYSPFSFHEGSGSGALTGYDVEVATAVADKLGV 143 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH- 132 P + F L++ + D+++ T R+ F I+ Sbjct: 144 KP---VFEETQFDGIFAGLEAGRWDVIANQISITDERKTV--YDFSEPYTVSPGVIIVKG 198 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 GISS + L G + Q+ T+ LA A E + + R D Sbjct: 199 SDSGISSFADLEGKTTA-QSLTSNWNELATQSGAK-----VEAVEGFAQAVTLLQQGRVD 252 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A D S+ + + S A +G + V Sbjct: 253 ATINDR-LTLLDYQKQQGDSDLKVAAETDDPSLSALVFRKGSDDLVAAVDQAL 304 >gi|218458308|ref|ZP_03498399.1| general L-amino acid ABC transporter, substrate-binding protein [Rhizobium etli Kim 5] Length = 62 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 37/61 (60%), Positives = 49/61 (80%) Query: 282 SSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341 + IG LGLT +W Y I++++GNYGE+F+RN+G S+LKI RG NALWSKGG+ YAPP+ Sbjct: 2 DTKIGTDLGLTNEWAYNIVKNVGNYGEVFERNIGQGSQLKIDRGLNALWSKGGIQYAPPV 61 Query: 342 R 342 R Sbjct: 62 R 62 >gi|108801905|ref|YP_642102.1| amino acid ABC transporter permease [Mycobacterium sp. MCS] gi|119871057|ref|YP_941009.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium sp. KMS] gi|108772324|gb|ABG11046.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. MCS] gi|119697146|gb|ABL94219.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Mycobacterium sp. KMS] Length = 489 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 82/268 (30%), Gaps = 31/268 (11%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + S + IK G L+ G F+ A+G G+DVD RA++ I Sbjct: 18 SCASADDGSDEPIKSAGVLRVGTEGVYAPFSYHDASGQLVGYDVDVARAVADKIGVRAE- 76 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG- 136 ++ F AL++ + D+++ R + Sbjct: 77 --FVETPWDAMFAALEAGRFDVVANEVTINAERRA--KYDLSQPYSVGEGVIVTRADDDS 132 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+++ L+G A + ++ + + + + R D Sbjct: 133 ITTLDDLAGKVAAENATS----NWSEVAREAGARVEAVE--GFTQAITLLNQGRVDVVVN 186 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D A+YA + I + KS A + + Sbjct: 187 DSIAVYAYLAETGD-TSVKIAGTVGEKSEQGFAARKDSGLLPELNRA------------- 232 Query: 257 TQKNINQVSKDTTNPDV-QRFLGIDKSS 283 ++++ D T ++ QR+L + S Sbjct: 233 ----LDELRADGTLAEISQRYLKANASG 256 >gi|330448489|ref|ZP_08312137.1| bacterial extracellular solute-binding s, 3 family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492680|dbj|GAA06634.1| bacterial extracellular solute-binding s, 3 family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 270 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 82/245 (33%), Gaps = 9/245 (3%) Query: 1 MYKDFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F V + L +LF +F+ L IK+RG L+ G++T V +A G+ G Sbjct: 1 MKRIFAVLLTALTLLFSVNHAFAAEKGTLEQIKERGTLRVGLST-FVPWAMRDKQGELIG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + ++ ++++P AL + + D++ T R +L + F Sbjct: 60 FEVDVAKRVAKDAGVK---VEFIPTAWDGIIPALLAGKFDVIIGGMSITPQR--NLSVLF 114 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G K+ ++ V K + K F+ Sbjct: 115 TTPYSHSGIQLAASKELASDKLTIADYNKRSVTLAVRRGAVTVQTAKKYFPKAKLRQFDD 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A + L + + +S+ AI QGD Sbjct: 175 ESQAFQEVLNGNAQAVLASTPKPEQMALQYKDKL-FIPFKERLSQGSEGFAIRQGDFNLL 233 Query: 239 NIVSW 243 N + Sbjct: 234 NFFNN 238 >gi|153835764|ref|ZP_01988431.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio harveyi HY01] gi|148867544|gb|EDL66878.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio harveyi HY01] Length = 256 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 76/226 (33%), Gaps = 14/226 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + K+ ++ GI F+ + +G KGFDVD AL + K Q + + Sbjct: 16 SGVAQAKEWKTVRFGIEGAYPPFSWTETDGSLKGFDVDMANALCEEM---KVKCQIVAQD 72 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +L +++ D + T R+ + F FI K + L Sbjct: 73 WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGANL-DFDNLD 129 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G I VQ TT + L D + K + + +E R A GD SAL Sbjct: 130 GQKIAVQRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEG 186 Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 L + + ++ A+ + D + + Sbjct: 187 VLNKAGGEAYEFVGPSLTDPKWFGDGFGIAVRKQDKDLTKKLDAAI 232 >gi|329766799|ref|ZP_08258329.1| hypothetical protein HMPREF0428_00026 [Gemella haemolysans M341] gi|328839310|gb|EGF88892.1| hypothetical protein HMPREF0428_00026 [Gemella haemolysans M341] Length = 273 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 95/259 (36%), Gaps = 20/259 (7%) Query: 1 MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGD 55 M K SI+ ++ L S S+ + L ++K++ + G++ + + N Sbjct: 1 MKKLLLFITSIITVVTLTACSSSSTKNKLQEVKEKNKIVLGVSPDYPPYEFLTTENGNKK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G D+ +S + +++ + AL + ++D++ + T R+ Sbjct: 61 VVGADIYLAEQVSKKLG---VQVEIQQMAFDSLIAALNANKVDMVISGVNPTEERKK--A 115 Query: 116 LAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F + Y F+++K I SV+ L I VQ G+T E + K + Sbjct: 116 VDFSEVYYTSKGIFVVNKDSEEIKSVADLKNKKIGVQKGSTYETYAKEQLKM--DDKNIQ 173 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAI 230 V + + + DA K+ ++ ++ I P +A A Sbjct: 174 ALTDVPSLLQDLKNKKIDAVLIPDDV---AKIAMNKYTDIKISTFTADNDPEATGMAIAF 230 Query: 231 IQGDTEWYNIVSWTHYAMV 249 +G + + A++ Sbjct: 231 KKGKNDSNKELLEQVNAVI 249 >gi|315641165|ref|ZP_07896243.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus italicus DSM 15952] gi|315483089|gb|EFU73607.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus italicus DSM 15952] Length = 283 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 101/292 (34%), Gaps = 31/292 (10%) Query: 1 MYKDFFVSILCLIILFFTSFST----------------NASILGDIKKRGFLKCGINTGL 44 M K + + ++ + S+ ++ +IKK G +K G + Sbjct: 1 MKKGLIGLVSVVALMVLGACSSSTTSSSSSSSTKSSSDASNQWSEIKKAGVIKVGTSADF 60 Query: 45 VGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F V G D+D A+ + ++Y+ ++ +L+ Q+DI Sbjct: 61 APFEFHTMVNGKDTIVGADIDMMDAIGKELGVK---VEYVDMDFNAVLASLEQGQVDIAV 117 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELT 159 T R+ + F + Q +++K +++ L+ + Q G+ E Sbjct: 118 SGISATDERKKT--FDFSVNYFTPEQLVVVNKANVSKYTTLDSLANKRVGAQKGSIQESI 175 Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 + D + +V + + + DA + + + ND + + Sbjct: 176 VKDQLP----DSQIVSLAKVPNLMVELKQNSIDAAVVESAVAQSYVAQNDDLAIADAKLE 231 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVT-AEELGITQKNINQVSKDTTN 270 A A+ +G TE + ++ M+ QKN + +++ +N Sbjct: 232 TAEGDAYAIAMPKGSTELADKINSALEKMIADGTIKEYVQKNTDLANENASN 283 >gi|227893084|ref|ZP_04010889.1| glutamine-binding protein precursor [Lactobacillus ultunensis DSM 16047] gi|227865062|gb|EEJ72483.1| glutamine-binding protein precursor [Lactobacillus ultunensis DSM 16047] Length = 272 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 83/236 (35%), Gaps = 10/236 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74 ++ +K+ + GI F G +GF+ D +AL+ I Sbjct: 21 SACGKPGKQNVYQKVKENNEIVWGIRADTRLFGLTNVKTGHIEGFETDLAKALTKQILGK 80 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + ++ A R L++ +D + T R + F + G ++ Sbjct: 81 KGRASFVTTTANTRIPLLKNGNVDAVLATMTITPERAK--QVTFTKPYFPAGSSLLVPNN 138 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I SV L+ ++ GTT + + ++ + +A +AH+ Sbjct: 139 SKIKSVKDLNNKTVLAVKGTTAVDDVHKSAPKA----RVLQYDDYGQAMSALKAHQGVTL 194 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 T D L + + P + ++ + S +P A+ +G TE + ++ + Sbjct: 195 TTDNGLLAGIAQ--ENPG-YKLVGGVYSDAPYGIAVNKGQTEMADHINEALKELEE 247 >gi|291448221|ref|ZP_06587611.1| glutamate binding periplasmic protein [Streptomyces roseosporus NRRL 15998] gi|291351168|gb|EFE78072.1| glutamate binding periplasmic protein [Streptomyces roseosporus NRRL 15998] Length = 299 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 76/232 (32%), Gaps = 10/232 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDD 74 T ++ + K+RG L G + + GFD++ + +++ + Sbjct: 43 AATGVDLDSPVFKKAKERGKLVIGAKADQPYLGFEDQSTKERSGFDIELAKMVAADLGFS 102 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +I++ +++ R A+ Q+D R+ +G F Y G ++ K Sbjct: 103 EKQIEWKTVDSGVRETAISKGQVDYYVGTYTINDERKKQVG--FAGPYYKAGADLLVRKD 160 Query: 135 -KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I+ + G +C G+T + + + + + DA Sbjct: 161 ETAITGKESVKGKKVCSIVGSTPLQEIKKPE----YGASVVELAKYSDCVQQLLTKQVDA 216 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 T D S L + ++ + P + + D +S + Sbjct: 217 VTTDDSILKGYAAA--NKGKLKVVGKPFTDEPYGIGLNKDDKVLREAISKSL 266 >gi|90962036|ref|YP_535952.1| polar amino acid ABC transporter substrate-binding protein [Lactobacillus salivarius UCC118] gi|90821230|gb|ABD99869.1| Polar amino acid ABC transporter, substrate binding protein [Lactobacillus salivarius UCC118] Length = 285 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 36/257 (14%), Positives = 81/257 (31%), Gaps = 18/257 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKC-----------GINTGLVGFAE 49 M K + L L + + + + G G++ V Sbjct: 1 MKKIVKIITCLLAFLIVGATLAGCTNVRK-RANGQDNWKKIEKKKKVVIGLDDSFVPMGF 59 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 + +G GFDVD R + D + + ++ + L++ ID++ Sbjct: 60 REKDGSLVGFDVDLAREVFKRYGID---VDFQTIDWSMKETELRNGTIDLIWNGYTVNPE 116 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT-TELTLADYFKAHN 168 R+ ++ F + Q + KK+ + + G ++ +Q+G++ E ++ N Sbjct: 117 RKKTVA--FSVPYLRNQQVLVSKKKENVYDAKSMKGKALGLQSGSSGYESYMSQPKLLKN 174 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + ++ A+R D P+ + I A Sbjct: 175 YVKEAVQYDTFNNAFLDLNANRIQGLLIDSVYADYYVAHEPDPNSYRISDVGFESENFAV 234 Query: 229 AIIQGDTEWYNIVSWTH 245 + +GD ++ Sbjct: 235 GMRKGDKTLQKKINMAL 251 >gi|260769856|ref|ZP_05878789.1| hypothetical amino acid ABC transporter amino acid-binding protein [Vibrio furnissii CIP 102972] gi|260615194|gb|EEX40380.1| hypothetical amino acid ABC transporter amino acid-binding protein [Vibrio furnissii CIP 102972] gi|315182148|gb|ADT89061.1| hypothetical amino acid ABC transporter, periplasmic aminoacid-binding protein [Vibrio furnissii NCTC 11218] Length = 257 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 84/251 (33%), Gaps = 26/251 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V + C+ LF T+ S ++ + F + G+ GFD Sbjct: 1 MKK-LAVGLACVATLFCTAVSA-----------KEVRLASDFTYPPFNYKNSAGEPVGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ AL D ++ + +L +++ D++ + T R+ + F Sbjct: 49 IEIADALCQEAKLD---CTWVAQSWDALIPSLLARKSDVIMASMRITDDRKK--KVLFTH 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y F+ K + L+G I VQ GT + + D F A + Sbjct: 104 KYYQTPARFVTRKSADFTLDKAGLTGKVIGVQQGTIHDRYVTDKFGA---VADIKRYTGQ 160 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +E+ + R DA G+ L L + D ++ A A+ + D Sbjct: 161 DEVYIDLQNGRLDATFGNADQLSLAFLDKADGQDFEFKGDAVTDKAYIGEGTALALRKQD 220 Query: 235 TEWYNIVSWTH 245 ++ Sbjct: 221 QALAEKLNQAI 231 >gi|197335081|ref|YP_002156067.1| cyclohexadienyl dehydratase [Vibrio fischeri MJ11] gi|197316571|gb|ACH66018.1| cyclohexadienyl dehydratase [Vibrio fischeri MJ11] Length = 254 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 40/268 (14%), Positives = 100/268 (37%), Gaps = 17/268 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K C+ +LF SF+ +A L +I++ G ++ G F+ + G+D Sbjct: 2 MKKKLL----CISVLFAASFTAHADRLDEIQEAGIIRVGTTGDYKPFSSFDGK-QFSGYD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + K++ + + K L + + DI + R++ + Sbjct: 57 IDVAKYIAEQL---DVKLELVQTSWKNLIPDLNADKYDIAMGGITRKIQRQLHAEQSQGY 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +T+ K + +++ +++ +S + + + H ++ Sbjct: 114 MTFGKCFLVAKGKAETYNTIDKVNKSSTRLGINIGGTNEI--FADTHLQSATFTRYKNNL 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ A + D + + T+ R E D +KS + +G+ E N Sbjct: 172 DVPQAVATGKVDVMVTETPEALYYQATDKR-LEAARCDDPFTKSQFGYLVPKGEQELLNA 230 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDT 268 V++ +E+ + + + K+ Sbjct: 231 VNFIM------DEMKLKGVDKELMKKNA 252 >gi|253578612|ref|ZP_04855884.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850930|gb|EES78888.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 280 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 70/226 (30%), Gaps = 9/226 (3%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 L G + F NG++ GFD+D + + + + K P+N + + Sbjct: 12 DSKTLTVGFDAQYPPFGYKDDNGEYVGFDLDLAQEVCDNLGWELVK---KPINWDSKDME 68 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 L S ID + + + + Q ++ GI + L+G ++ VQ Sbjct: 69 LNSGSIDCIWNGFTINGRED---DYTWSNPYLNNEQVMVVAADSGIEKLDDLAGKNVVVQ 125 Query: 152 AGTTTELTLA--DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 A + L D + DA DI + Sbjct: 126 AASAALDALNSDDNKDLTASFASLTENPDYNTAFMNLDSGAADAIAVDIGVAKYQLSQRE 185 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 +VIL + I +G+ E + V + A E+ Sbjct: 186 EGK-YVILDEPIQSEEYGIGFKKGNDELKDTVWEEVLKLYDAGEVD 230 >gi|49083417|gb|AAT51027.1| PA1260 [synthetic construct] Length = 274 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 80/232 (34%), Gaps = 6/232 (2%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + A L DI + G L+C + A + GFDVD+C L+ A+ Sbjct: 17 CSLAGLAQADKLDDIIESGKLRCAVTLDFPPMGSRDAQNNPVGFDVDYCNDLAKALDVKA 76 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 ++ +R AL S + D++ +T TL R ++G+ + + + + Sbjct: 77 EIVE---TPFPDRIPALVSGRADVIVASTSDTLERAKTIGM--SIPHFAFVKVVLTREDT 131 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAY 194 GI+S L G + AGT L L KA K ++ + A DA Sbjct: 132 GIASYEDLKGRPVGGTAGTFEALALEKDSKAWGDAKGSFRAYQSEADTALAISQGHIDAT 191 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + + +A + + N ++ Sbjct: 192 VVSSTVAASWIKSGKYKGLEIAGDAPYDIDYVALGAKRNEYGLLNYLNLFIN 243 >gi|227325923|ref|ZP_03829947.1| glutamine ABC transporter periplasmic protein [Pectobacterium carotovorum subsp. carotovorum WPP14] gi|253687972|ref|YP_003017162.1| cationic amino acid ABC transporter, periplasmic binding protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754550|gb|ACT12626.1| cationic amino acid ABC transporter, periplasmic binding protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 248 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 81/247 (32%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M S+ L ++ S L +T V F + + + GFD Sbjct: 1 MKSLLKASLAALTLMMSVSSYAAE---------KELIVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + K P++ ALQ++ ID+ T R+ + F Sbjct: 51 IDLWDAIAKQL---NLKYTLKPMDFGGIIPALQTRNIDLALAGITITEERKK--AIDFSD 105 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I L+G + V++GT + DY KA+ F + Sbjct: 106 GYYNSGLLVMVKADNNDIKGEQDLAGKVLAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + +R DA D + T + + D I A +G E Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSIKAQQYGIAFPKGSNELRE 220 Query: 240 IVSWTHY 246 V+ Sbjct: 221 KVNGALK 227 >gi|170767489|ref|ZP_02901942.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia albertii TW07627] gi|170123823|gb|EDS92754.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia albertii TW07627] Length = 260 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 95/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L++ + S+ A++ + + G +T F+ A GD+ GFD Sbjct: 1 MKKSIL--ALSLLVGISAAASSYAALPEAV------RIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E D +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANDNWRSKGID--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L + + + + D Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGPSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE EL ++++K + +V Sbjct: 226 TELKAAFDKAL------GELRQDGT-YDKMAKKYFDFNV 257 >gi|227833320|ref|YP_002835027.1| glutamate ABC transport system, solute-binding protein [Corynebacterium aurimucosum ATCC 700975] gi|262184304|ref|ZP_06043725.1| glutamate ABC transport system, solute-binding protein [Corynebacterium aurimucosum ATCC 700975] gi|227454336|gb|ACP33089.1| glutamate ABC transport system, solute-binding protein [Corynebacterium aurimucosum ATCC 700975] Length = 294 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 84/253 (33%), Gaps = 16/253 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIFDD 74 S S +L I + G + G G + +G G DVD ++ + Sbjct: 31 SASGGDGLLASI-ESGSVTLGTKFDQPGLGLREGDGSMTGLDVDVATYVVNHIAKDKGWE 89 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 +I++ + +R +++ ++D+++ R + F Q + Sbjct: 90 EPEIEWRETPSAQRETLIENGEVDLIAATYSINASRAE--KVNFAGPYLITHQALLTQND 147 Query: 135 K-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I+ + L G +C G+T + + + ++ A DA Sbjct: 148 NKDITGLEGLDGKILCSVTGSTPAQKVKEALPS----VQLQEYDTYSSCVEALSQGNVDA 203 Query: 194 YTGDISALYALKLTNDRPSEHVIL---PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 T D + L N + V L + + + D E + ++ + + Sbjct: 204 MTTDATILNGYAAQNPGKFQVVELEKDGKPFTDEYYGVGLKKDDQEATDAINKALEELHS 263 Query: 251 AEELG-ITQKNIN 262 + E + KN++ Sbjct: 264 SGEFDKLVSKNLD 276 >gi|50121692|ref|YP_050859.1| glutamine ABC transporter periplasmic protein [Pectobacterium atrosepticum SCRI1043] gi|49612218|emb|CAG75668.1| glutamine-binding periplasmic protein [Pectobacterium atrosepticum SCRI1043] Length = 248 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 81/247 (32%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M S+ L ++ S L +T V F + + + GFD Sbjct: 1 MKSLLKASLAALTLMMSVSSYAAE---------KELIVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + K P++ ALQ++ ID+ T R+ + F Sbjct: 51 IDLWDAIAKQL---NLKYTLKPMDFGGIIPALQTRNIDLALAGITITEERKK--AIDFSD 105 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I L+G + V++GT + DY KA+ F + Sbjct: 106 GYYDSGLLVMVKADNNDIKGEQDLAGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + +R DA D + T + + D I A +G E Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSIKAQQYGIAFPKGSNELRE 220 Query: 240 IVSWTHY 246 V+ Sbjct: 221 KVNGALK 227 >gi|257461157|ref|ZP_05626255.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257441531|gb|EEV16676.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 267 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 100/246 (40%), Gaps = 22/246 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F IL LF A+ L +I+ G ++ G+ G F+E+ + G ++GF+++ Sbjct: 2 KLLFTLILLCAGLF-------ANTLQEIRNSGVIRVGVRDGRPPFSEI-SGGKFEGFEIE 53 Query: 63 FCRALSSAIFD-DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 A++ AIF ++Q++ L+A +R L + ++D+++ R+ + F Sbjct: 54 LANAIAKAIFGAKQGEVQFVSLSAADRVSYLVNNKVDMVAATFVIDSARKNH--VDFSMP 111 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + G + K I +S+L + + GTT + L + + E Sbjct: 112 YFSTNLGVLTRKADAIKDISRLRDMRLITEEGTTVDNYLKKEKFTNAS-----YCKSTSE 166 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGDTEWYN 239 A R + D Y + A + + + +P P + + +G+ E + Sbjct: 167 CYAMIRDGKADGYVNLNITVLAYAVV----DDTLEVPFQNFGKPDFIGIGVQKGNKELLD 222 Query: 240 IVSWTH 245 ++ Sbjct: 223 FINAEL 228 >gi|257093093|ref|YP_003166734.1| family 3 extracellular solute-binding protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045617|gb|ACV34805.1| extracellular solute-binding protein family 3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 257 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 90/244 (36%), Gaps = 15/244 (6%) Query: 4 DFFVSILCLI--ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 F +L + + + + A IK+ G L G F GF+V Sbjct: 2 RFLARLLSAVIPLSLMIAGPSEAREWNAIKQSGTLVAATEGGFQPFNYYDGP-KLTGFEV 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + K+++ + + AL+ + D + +T R + F Sbjct: 61 DLAEAIAKKLG---LKLEWRVVPFDGQIAALKQDRFDFAIASHGYTEERAK--SVDFANP 115 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G HK + +V L+G ++ VQ T+ AD K ++ E Sbjct: 116 HYCTGGQIAAHKDGPL-TVVALNGKTVGVQLATSY----ADAAKKVKGIKTIKTYKGDPE 170 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AA RA++ DA+ D + A + P + +++ ++ + + + E + + Sbjct: 171 AFAALRANKVDAWISDKFTVKATL--DKNPDAGITGGELVFVERVSMILRKNNKELADKL 228 Query: 242 SWTH 245 + Sbjct: 229 NQAL 232 >gi|153833182|ref|ZP_01985849.1| arginine-binding periplasmic protein 1 [Vibrio harveyi HY01] gi|148870612|gb|EDL69520.1| arginine-binding periplasmic protein 1 [Vibrio harveyi HY01] Length = 247 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 85/258 (32%), Gaps = 21/258 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L + + +K + F + N +GFD Sbjct: 1 MKKILLASLIGLSSATMAANAAAQE---------EIKFAMEATYAPFEYMDENNQIQGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + + AL+ K+ D D T R + F Sbjct: 52 VDLANALCKEM---EAKCTFHNQSFDSLIPALKFKRYDAAISAMDITDAR--LEQVNFSD 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ K+ ++ L G + VQ G+T + L + + + + Sbjct: 107 PYYDNSAAFVSIKE-KVADQKALEGKRVGVQNGSTHQSYLIEQMP----GVTAVPYSSYQ 161 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238 + + R D+ GD + + D + + + A+ +G+ E Sbjct: 162 DAFIDMKNGRIDSVFGDTAVVAEWFKKEDNLAYVGEHVTNPKYFGNGFGIAVNKGNDELV 221 Query: 239 NIVSWTHYAMVTAEELGI 256 N ++ + E + Sbjct: 222 NKLNTALKTVKANGEYDV 239 >gi|240145777|ref|ZP_04744378.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Roseburia intestinalis L1-82] gi|257202109|gb|EEV00394.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Roseburia intestinalis L1-82] Length = 284 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 34/276 (12%), Positives = 80/276 (28%), Gaps = 37/276 (13%) Query: 1 MYKDFFVSILCLIIL-FFTSFSTNASIL------------------------GDIKKRGF 35 M K +L ++ + +N++ D ++ Sbjct: 1 MKKKVISILLTAVLATGMAACGSNSNTASNSANNTADNAQNTAETSTESTGSADSAEKPV 60 Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G+ + NG GF+VD A+ + D +Q++ AL + Sbjct: 61 LTVGMEGTYAPYTYHDENGTLTGFEVDMANAIGEKMGYD---VQFVETEWDSITAALDAG 117 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGT 154 D++ T R+ F + I+ I+S ++G + Sbjct: 118 NFDVVMNQVTITDERKE--KFDFSTPYIYSKPVLIVAADNTDINSFEDINGKKAAEGLTS 175 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 +D +++ + ++ + D D K Sbjct: 176 ----NFSDIARSYG--AEIVGQDKFALAMECVLSGEADCAINDELTYAYWKQQKGGEDST 229 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 I+ + + + A + +G+ E ++ ++ Sbjct: 230 KIVAESDNVNSSAIMVKKGNDELIEKLNSAIDELLA 265 >gi|323339543|ref|ZP_08079818.1| glutamate ABC superfamily ATP binding cassette transporter substrate-binding protein [Lactobacillus ruminis ATCC 25644] gi|323093023|gb|EFZ35620.1| glutamate ABC superfamily ATP binding cassette transporter substrate-binding protein [Lactobacillus ruminis ATCC 25644] Length = 273 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 37/268 (13%), Positives = 80/268 (29%), Gaps = 22/268 (8%) Query: 1 MYKDF------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---K 51 M ++ I L S + IK +G L G + F Sbjct: 1 MKNRLAKIFCSLAAVGAAIFLISGCGSKKTGAVDTIKDKGTLVVGTSADYAPFEFPIVKD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + G+D+ + ++ + ++ + L++K+ID++ T R Sbjct: 61 GKKEIVGYDMMVAQKIADDMGVK---LKIVNTEFPSLISELKNKKIDLIMAGMVSTAERR 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + F Y ++ KK + + L+G I VQ TT E KA Sbjct: 118 KVIA--FSKPYYKVYNVVLVQKKDAKNFPTKASLAGKQIGVQQSTTQEAIAKKQLKA--- 172 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS--PLA 227 + ++ + + + + + T + + + + Sbjct: 173 -SKLVTESQLTSLTTELKEGKLSGVVCEKAIADNYLATYPDKYAVAKVKLVTPEENKNID 231 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG 255 I + D + V + + +L Sbjct: 232 IGIRKDDKDLKKCVDKVLTKLEKSGQLD 259 >gi|170724085|ref|YP_001751773.1| extracellular solute-binding protein [Pseudomonas putida W619] gi|169762088|gb|ACA75404.1| extracellular solute-binding protein family 3 [Pseudomonas putida W619] Length = 250 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 76/235 (32%), Gaps = 20/235 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 YK F ++ ++ + + L+ GI F A+G+ GFD Sbjct: 4 YKKFLLAAAATLVFSANAMAAE-----------KLRMGIEAAYPPFNNKDASGNVVGFDK 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D AL + + + + + AL +K+ D L + T R+ + F Sbjct: 53 DIGDALCAKMKVE---CSVVTSDWDGIIPALNAKKFDFLVSSLSITDERK--QAVDFTDP 107 Query: 122 TYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K + L G I Q T L D + +++ E Sbjct: 108 YYSNKLQFIAPKNVDFKTDAGYLKGKIIGTQRATLAGTWLEDTY---GSDIDIKLYDTQE 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + R D D Y + D + ++ + A+ +GD Sbjct: 165 NAYLDLISGRVDGILADKYVQYEWLKSKDGMNFEFKGEPVVDSDKIGIAVRKGDP 219 >gi|21224122|ref|NP_629901.1| glutamate binding protein [Streptomyces coelicolor A3(2)] gi|2687341|emb|CAA15882.1| glutamate binding protein [Streptomyces coelicolor A3(2)] Length = 278 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 72/218 (33%), Gaps = 8/218 (3%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 + GI G + +G + GFDVD ++ + +I++ + +R LQ Sbjct: 38 KKITIGIKFDQPGLGQKTPDG-YAGFDVDVATYVAKKLGYTEDQIEWKESKSADRETMLQ 96 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPIT-YFDGQGFIMHKKKGISSVSQLSGASICVQA 152 +D ++ T R S + F I I S L+ A +C Sbjct: 97 RGDVDFIAATYSITPER--SEKVDFAGPYLLAHQDVLIRADDDKIKSPEDLNDAKLCSVT 154 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T+ + D K + + DA T D S L + Sbjct: 155 GSTSAQNVKDKLA---PKAQLQKYPTYSACLNGLQTGAIDALTTDDSILAGYAAQSQFKG 211 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + + ++ + +G ++ ++ AM T Sbjct: 212 KFKLGGFKMTNENYGIGVKKG-SDLKAKINDALEAMAT 248 >gi|27365435|ref|NP_760963.1| amino acid ABC transporter periplasmic amino acid-binding protein [Vibrio vulnificus CMCP6] gi|37680522|ref|NP_935131.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio vulnificus YJ016] gi|27361582|gb|AAO10490.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio vulnificus CMCP6] gi|37199270|dbj|BAC95102.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio vulnificus YJ016] Length = 258 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 80/226 (35%), Gaps = 14/226 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + K+ ++ GI F+ +A+G KGFDVD AL + + + + + Sbjct: 18 SGIAQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCEEM---KVQCKIVAQD 74 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +L +++ D + T R+ + F FI K G++ LS Sbjct: 75 WDGIIPSLLARKYDAIIAAMSITEERK--QKVDFTGKYALIPNKFIAKKGAGLNFDK-LS 131 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G I VQ TT + L D + + + + +E R A GD SAL Sbjct: 132 GVKIGVQRATTHDKYLTDNYGKN---VDIVRYGSFDEAYLDLANGRIAAVLGDASALEEG 188 Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 L + + ++ A+ + D + + Sbjct: 189 VLNKAGGEGYEFVGPSLTDPKWFGEGFGIAVRKQDKDLTKQLDAAI 234 >gi|294787651|ref|ZP_06752895.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Simonsiella muelleri ATCC 29453] gi|294483944|gb|EFG31627.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Simonsiella muelleri ATCC 29453] Length = 282 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 102/335 (30%), Gaps = 75/335 (22%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL------GDIKKRGFL---KCGINTGLVGFAEVK 51 M + ++ CL+IL A+ + + L G + F Sbjct: 6 MKNNIL-ALTCLLILAACGNDAPATQISNNQPVESVSAPKKLERYVVGTDATYPPFDFKD 64 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G GFD D +A++ + I+++P + F L IL+ R Sbjct: 65 EHGQLTGFDADLLKAIAD---NQNFSIEFIPTARSQLFPGLNEGYYQILAACLGINAERL 121 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + F + + +++QL +S+ VQ + T L D + Sbjct: 122 AQSEM--SEPYAFAPNVIMGKTGNNVQTLAQLGNSSVAVQQDSYTHKVLTDSGIKN---- 175 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR---PSEHVILPDIISKSPLAP 228 I + E + + R D GD L N P + + + +A Sbjct: 176 -IITEKTPYEAYVDFVSGRADYVVGDAGVLNYYHKNNKDTHKPQTYSAVYNKTEDVRVAF 234 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288 A+ +G+TE N ++ Sbjct: 235 AVKKGNTELINKINE--------------------------------------------- 249 Query: 289 LGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323 GL I+ G Y +++ + G + L++P Sbjct: 250 -GLKN------IKANGTYDKIYAKWFGTDNSLRVP 277 >gi|70733847|ref|YP_257487.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] gi|68348146|gb|AAY95752.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] Length = 250 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 75/236 (31%), Gaps = 22/236 (9%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 YK ++ + L F++ + LK GI F A+G GFD Sbjct: 4 YKKILLA--AAVTLAFSASAAAE----------TLKMGIEAAYPPFNNKDASGQVVGFDK 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D AL + + + + + AL +K+ D L + T R+ + F Sbjct: 52 DIGDALCAKMKVE---CTVVTSDWDGIIPALNAKKFDFLISSLSITDERK--QAVDFTDP 106 Query: 122 TYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + FI K + + L G I Q T L D +++ Sbjct: 107 YYSNKLQFIAPKAKTDFKTDKASLKGKIIGAQRATLAGTWLEDNL---GDDITIKLYDTQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E + R DA D Y ++ ++ + A+ + D Sbjct: 164 ENAYLDLTSGRLDAILADKYVNYEWLKSDAGKPYEFKGEPMVESDKIGIAVRKKDP 219 >gi|302519117|ref|ZP_07271459.1| sugar-binding protein [Streptomyces sp. SPB78] gi|302428012|gb|EFK99827.1| sugar-binding protein [Streptomyces sp. SPB78] Length = 336 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 70/225 (31%), Gaps = 17/225 (7%) Query: 33 RGFLKCGINTGLVGFAEV----KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 RG L G++ + N D +GFD+D A++ + DP + + R Sbjct: 81 RGKLVVGVDQNSYRWGFRNPQRDGNNDIEGFDIDLAHAIAKDLLGDPDALVLRAIPTNRR 140 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGAS 147 A+ +D++ R T R ++F + Q I+ + + + L+G Sbjct: 141 VQAVADHDVDMVVRTMTITCRR--LKDVSFSTPYFRTTQRIIVPRGSSVDGFNASLTGKR 198 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C +T E L + FK K + + + DA D + Sbjct: 199 LCSADSSTAENVLTEGFK---DKVELVSVPNQLDCLVRLQLGEVDALVTDGALGEGQLAQ 255 Query: 208 NDRPSEHVILPDIISK-------SPLAPAIIQGDTEWYNIVSWTH 245 + + A+ Q V+ Sbjct: 256 DPSLDMQGGPDENNPADRDSPAWEYYGIAMNQDSPRLVARVNKIL 300 >gi|251777721|ref|ZP_04820641.1| amino acid ABC transporter [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082036|gb|EES47926.1| amino acid ABC transporter [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 278 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 94/263 (35%), Gaps = 29/263 (11%) Query: 2 YKDFFVSILCLIILFFTSFSTN------------ASILGDIKKRGFLKCGINTGLVGFAE 49 K + + + + + N AS+L IK++G L G + + Sbjct: 7 KKLGLIVAIGAMAISIVGCAGNKNEAGSKGGKETASVLESIKQKGKLVVGTSADYPPYEF 66 Query: 50 ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 V GFD+ ++L+ + + +Q ++ +ALQ+ ++D++ Sbjct: 67 HKEVGGKDQIVGFDISIAKSLAEDLGVE---LQINDMDFDGLLIALQAGKVDMVFAGMTP 123 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R F I Y GFI+ K + I S+ L I VQ G+ E + Sbjct: 124 TDER--KQNAEFSDIYYTAQHGFIVRKGEEGNIKSIDDLKDKKIGVQKGSIQERLANEKI 181 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISK 223 +V ++ + ++ DA ++ N +VIL D Sbjct: 182 P----DAEKKALGKVTDLVLDLKNNKVDAILVELPVAEFNCEKNSDIALTNVILEDSEGG 237 Query: 224 SPLAPAIIQGDTEWYNIVSWTHY 246 S A A+ +G + ++ T Sbjct: 238 S--AIAMSKGSDDLKGEINKTIQ 258 >gi|322411493|gb|EFY02401.1| arginine-binding protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 270 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 38/264 (14%), Positives = 77/264 (29%), Gaps = 18/264 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 K F ++ L+I + + + IK+ G L ++ F V Sbjct: 4 KKILFSLLVPLLIFTLAACGKSEKVNRQDSIKQAGKLVVAVSPDYAPFEFKALVNGKDTI 63 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D+ +A++ + ++ P++ +LQ+ + D+ +T R Sbjct: 64 VGADIQLAQAIADELGVK---LELSPMSFDNVLSSLQTGKADMAISGLSYTKERAKV--Y 118 Query: 117 AFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y +M K V+ L G + Q G+ E + N + Sbjct: 119 DFSTPYYETENAILMRAADAKAAKDVTSLEGQKVAAQKGSIEEGLVKSQLPKSN----LV 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + E +A + A + + + A A+ + Sbjct: 175 ALTAMGEAVNELKAGQVYAVDLEGPVAAGYLAQHKDLALASFSLKTTDGDAKAVALPKNS 234 Query: 235 TEWYNIVSWTHYAMVTAEELGITQ 258 V+ AE+ Sbjct: 235 GALTKTVNKVI--AKLAEDNQYKT 256 >gi|261820773|ref|YP_003258879.1| cationic amino acid ABC transporter periplasmic protein [Pectobacterium wasabiae WPP163] gi|261604786|gb|ACX87272.1| cationic amino acid ABC transporter, periplasmic binding protein [Pectobacterium wasabiae WPP163] Length = 259 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 96/279 (34%), Gaps = 29/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V L LI+ S + DI K +K G + F A+G+ GFD Sbjct: 1 MKKLIKVLPLALIL-------AAGSAMADIPKN--IKIGTDPTYAPFESKNASGELVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + L I + ++ + +L++K+ID + + T R +AF Sbjct: 52 IDLAKELCKRI---EANCTFVESDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFTE 106 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I +++ L G + V +T E ++ + ++ Sbjct: 107 KLYAANSRLIAKKGANIEPTLASLGGKRVGVLQASTQEAFANANWQPKG--VEVVAYQNQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I A A R DA D A L D ++ + + + D Sbjct: 165 DLIYADLAAGRVDAAFQDEVAASEGFLKLDMGKDYAFAGPAVKDDKFFGVGTGMGLRKAD 224 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE A+ A E + +K + DV Sbjct: 225 TELKA-------ALDKAFEAMRKDGTYDTFAKKYFDFDV 256 >gi|86605397|ref|YP_474160.1| cystine ABC transporter, cystine-binding protein [Synechococcus sp. JA-3-3Ab] gi|86553939|gb|ABC98897.1| cystine ABC transporter, cystine-binding protein [Synechococcus sp. JA-3-3Ab] Length = 287 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 89/261 (34%), Gaps = 23/261 (8%) Query: 5 FFVSILCLIILFF---TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 F+++ L + + + +L +++RG L+ ++ + + +G W+GFDV Sbjct: 12 LFLTLAGCWALGTHQGSLLAQGSDLLAQVQERGVLRVSTDSNYRPQSYLNPDGSWEGFDV 71 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D R ++ + +L +N + + D+ + T R+ L F Sbjct: 72 DVAREIAKRLGVKAE---FLDINFDVITAGSWNGRWDVNVGSMTVTAERQK--ALLFTIP 126 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-------PI 174 Y+ F++H+ ++ ++ L G + V TT + L Sbjct: 127 YYYTPASFVVHQASTLTDIAALEGKRVGVGTATTYQAYLEGNLTLEGETIQVPAPRVDIR 186 Query: 175 VFERVEEIDAAYRAH---RCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPAI 230 +++ R DA + A++ L D + LA A+ Sbjct: 187 IYDTDSLALQDLALGDGTRLDAVLTALPTAENAIREGLP----LKTLGDPVYYEALAVAL 242 Query: 231 IQGDTEWYNIVSWTHYAMVTA 251 + + ++ + Sbjct: 243 DRSSPAPSESLQAKINEILES 263 >gi|329298254|ref|ZP_08255590.1| cationic amino acid ABC transporter periplasmic-binding protein [Plautia stali symbiont] Length = 243 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 77/213 (36%), Gaps = 12/213 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ F V ++ +GFDVD AL I + + +L+ Sbjct: 22 TLRFATEASYPPFEFVDSDNKIQGFDVDLANALCKEI---DATCTFTNQAFDSLIPSLKF 78 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 ++ D + D T RE + F Y + FI K ++ V+ L G + VQ GT Sbjct: 79 RRFDAVMAGMDITPEREKH--VLFTKPYYDNSATFIAQKG-KLADVAALKGKRVGVQNGT 135 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T + L+D + + ++ + + R DA GD + + N + Sbjct: 136 THQKYLSD----KHSDITIVPYDSYQNAVLDLKNGRIDAVFGDTAVVNEWLKQNANLAAL 191 Query: 215 --VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + L A+ QG+TE + Sbjct: 192 GEKVTDKAYFGTGLGIAVRQGNTELQQKFNGAL 224 >gi|317406131|gb|EFV86388.1| glutamine-binding periplasmic protein [Achromobacter xylosoxidans C54] Length = 247 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 81/212 (38%), Gaps = 13/212 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ + V +G GFD++ AL++A+ ++++ ++ K ALQ+ Sbjct: 28 TIRAVTDATFPPMEFV-KDGKRTGFDIELVEALAAAMGKK---VEWIDIDFKGLIPALQA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 + DI T R + F Y G + K + ++ L G + VQ GT Sbjct: 84 GRADIAVSAIYITPERSKV--VDFTDPYYAGGLVVLTKKDGPVKTLKDLDGRKVSVQVGT 141 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + L +++ + + E+ +E+ + R DA A KL ++ Sbjct: 142 KSVNYLKEHYPS----VQRVEVEKNQEMFNLVQIGRADAAVTGKP---AAKLFAQSTTDL 194 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 +L D I+ A+ + E ++ Sbjct: 195 TVLADQITTEDYGIAVPKNKPELTRGLNEALQ 226 >gi|324112847|gb|EGC06823.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia fergusonii B253] Length = 260 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ ++ +++ + L + ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSILALSL---LVGISAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E D +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANDNWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L + + + + D Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGPAVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257 >gi|319950339|ref|ZP_08024258.1| extracellular solute-binding protein family 3 [Dietzia cinnamea P4] gi|319436031|gb|EFV91232.1| extracellular solute-binding protein family 3 [Dietzia cinnamea P4] Length = 273 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 86/216 (39%), Gaps = 8/216 (3%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 LK GI G + N ++ GFDVD R ++ + I+++ + +R L++ Sbjct: 34 LKVGIKFDQPGLGLKEGN-EYTGFDVDVARYIAEKLGTAEDDIEWIQAPSAQRETLLETG 92 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGT 154 Q+D++ T R+ +G F + GQ ++ + L G +C G+ Sbjct: 93 QVDMIVATYSITDSRKEKVG--FAGPYFIAGQDLLVRADDDSITGPDSLDGKRLCSVTGS 150 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T+ T+ + + F E +A ++ DA T D + L + + Sbjct: 151 TSAQTVKEKVP----GVNLQEFGTYSECVSALVSNAVDALTTDDTILAGYASQDQYQGQL 206 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 ++ ++ I +GDTE ++ M++ Sbjct: 207 KVVGAPFTEERYGVGIAKGDTEKCEQINEAIREMIS 242 >gi|171320533|ref|ZP_02909559.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171094226|gb|EDT39307.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 266 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 72/227 (31%), Gaps = 13/227 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S A +L +K+ G LK + F A G +GFDVD A+++ + P + Sbjct: 24 SHAADLLDTVKQAGVLKIALEGTYPPFDYRNAEGQLEGFDVDVATAVAARLGVKP---AF 80 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--IS 138 + LQ+ + D++ T R L F + + + Sbjct: 81 VTTEWSGILAGLQAGKFDVIVNQVAITPSR--QQALDFSMPYVYSSAQLLQRQNDTRAFK 138 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S+ +L G + V G+ + V+ E A R DA D Sbjct: 139 SLDELKGKKVGVTMGSNYVDLVKTVPA-----IDLQVYPGTPENLRDLAAGRIDAAVNDR 193 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + + N + + +G+ ++ + Sbjct: 194 -LMLSYLIKNSHLPLRPGSVLAGGEDRMGIPFRKGNPKFAKAIDDAV 239 >gi|313115586|ref|ZP_07801045.1| bacterial extracellular solute-binding protein, family 3 [Faecalibacterium cf. prausnitzii KLE1255] gi|310622101|gb|EFQ05597.1| bacterial extracellular solute-binding protein, family 3 [Faecalibacterium cf. prausnitzii KLE1255] Length = 282 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 100/264 (37%), Gaps = 15/264 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L IK+ G + G+ + F V NG+++G+DV F R L + + I ++ A Sbjct: 5 TLDQIKESGTINIGVFSDKNPFGYVDENGEYQGYDVYFARRLGEDLGVE---INFVSTEA 61 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLS 144 R LQ+ + D++ N T R + F G I I+++ + + Sbjct: 62 ANRIEYLQTGKADVILANFTVTPERAE--EVDFALPYMNVALGVISPDSNVITTLDNWNA 119 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 + V +GTT E L + ++ A A+ D + + A Sbjct: 120 DDQMIVISGTTAETYLTKEYP----DIPLQKYDSYATAKNALENGNGVAWANDNTEVIAF 175 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 V +P + S+ +APA+ QG+T + ++ A+ E K+ + Sbjct: 176 AKQ--NTGYTVGIPSLGSQDTIAPAVSQGNTTVLDWLNEEIKAL---GEENFFHKDYEET 230 Query: 265 SKDTTNPDVQRFLGIDKSSNIGEA 288 DT D + L ++ G Sbjct: 231 LVDTYGLDYEDELVVEGGVTGGAD 254 >gi|303247503|ref|ZP_07333775.1| extracellular solute-binding protein family 3 [Desulfovibrio fructosovorans JJ] gi|302491199|gb|EFL51091.1| extracellular solute-binding protein family 3 [Desulfovibrio fructosovorans JJ] Length = 250 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 83/240 (34%), Gaps = 17/240 (7%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 + +L F + + GI+ G F V +G GFDV+ ++ + Sbjct: 14 VFVLCFGGLAAA--------EEKVYINGIDFGFPPFGYVDKDGKPTGFDVESLNWIAKKM 65 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 K+++ P++ AL +K+IDI++ T R + F Y Q ++ Sbjct: 66 G---FKVKHQPMDWDGIIPALLAKKIDIVASGMSATAERAK--KVDFSIPYYEVTQVLLV 120 Query: 132 HKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 +K + L G I VQ GT T L + K+ + ++ + + R Sbjct: 121 PEKDKTTLAEMLKSGKKIGVQRGTVTAKLLEELVTKPGYKFEVVPYDSTDLSIEDVKIGR 180 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 D + K P + A+ + D E+ ++ ++ Sbjct: 181 IAGSGMDSTI---AKEVMKNPGFKIAGTFDAKPEKYGYAMRKEDKEFQKKINDGLKLLMA 237 >gi|293415602|ref|ZP_06658245.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli B185] gi|291433250|gb|EFF06229.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli B185] Length = 260 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ ++ +++ + L + ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E + +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANEAWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L + + + + D Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257 >gi|320183197|gb|EFW58055.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Shigella flexneri CDC 796-83] Length = 243 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 85/249 (34%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIYANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + F Sbjct: 48 VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +SV QL G + VQ GTT + + D + ++ + Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVGVQNGTTHQKFIMDKHPE----ITTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + D P + + K L A+ QG+TE Sbjct: 158 NAKLDLQNGRIDGVFGDTAVVTEWL--KDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTE 215 Query: 237 WYNIVSWTH 245 ++ Sbjct: 216 LQQKLNTAL 224 >gi|226313902|ref|YP_002773798.1| L-cystine ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] gi|226096852|dbj|BAH45294.1| L-cystine ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] Length = 277 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 71/270 (26%), Gaps = 33/270 (12%) Query: 1 MYKDFFVSILCLIILFFTSF------------STNASI--------LGDIKKRGFLKCGI 40 M K F + +++ + A L +K G + G Sbjct: 1 MKKLLFSLLASTLLVALAGCGSSSTGQSPQNSAAPAPTEEKKEQNLLEKVKADGKMLIGT 60 Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 F +G G+DV+ ++ I +P + F L SK+ D++ Sbjct: 61 EGTYAPFTFHDQSGKLTGYDVEVVTEVAKRIGVEP---VFQETQWDAMFAGLDSKRFDVV 117 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELT 159 + + F + HK + + + G T Sbjct: 118 ANQVGI--RPDRQEKYDFSNPYTVSTAVLVTHKDNTTVKGFADIKGLKAA----QTLTSN 171 Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 L D K + + E + + R D D +L +I D Sbjct: 172 LTDIAKKNG--AEIVGVEGFNQAIDLLVSKRVDVTINDGISLLDFMKQKPDVPIKIIAKD 229 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 +G TE + + M Sbjct: 230 PNVAK-NGFLFRKGSTELVDAFNKALDDMT 258 >gi|224367455|ref|YP_002601618.1| ArgT [Desulfobacterium autotrophicum HRM2] gi|223690171|gb|ACN13454.1| ArgT [Desulfobacterium autotrophicum HRM2] Length = 250 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 33/246 (13%), Positives = 82/246 (33%), Gaps = 17/246 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 ++ + + + ++ + + A + GI+ FA + G GFDV Sbjct: 3 KRNLILLVAAVSLIVAGTTTAFAG--------KKIVNGIDANFPPFAYIDKTGKPAGFDV 54 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + ++ + +++++P++ +L +K+IDI++ T + S + F Sbjct: 55 EAMEWIAKDLG---LEVEHMPIDWDGIITSLLTKKIDIIASGMSITP--DRSEKVTFTIP 109 Query: 122 TYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q ++ K ++ + G I VQ GTT L + + + Sbjct: 110 YWKINQVMVVKKDSTLTMNDLMKGGKKIGVQQGTTEAKWLKAESEPRAWNFKLGYYSSSP 169 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 R + ++ + A+ + +TE Sbjct: 170 LAVEDVLNGR---IAAAAMDDAPAHDAVSKKDVKILGNFGMEAEDFGYAVRKDETELLEK 226 Query: 241 VSWTHY 246 ++ + Sbjct: 227 INASLK 232 >gi|169826052|ref|YP_001696210.1| histidine-binding protein [Lysinibacillus sphaericus C3-41] gi|168990540|gb|ACA38080.1| Histidine-binding protein precursor (HBP) [Lysinibacillus sphaericus C3-41] Length = 264 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 70/214 (32%), Gaps = 7/214 (3%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 + K G F V G G DVD +A++ + ++++ + + F + Sbjct: 41 KKVYKVGTEATFAPFESVDDKGKIVGIDVDILKAIADEM---DFEVEWNNIGWEPVFQTI 97 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152 ++ + I + T R+ F Y ++ + I S+ +L + VQ Sbjct: 98 KNGETHIGASGITITDERKE--SFDFTEPYYESQLLIVVKEDSKIKSLDELKDKKVSVQI 155 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 T + + + FE DA GD + +Y + Sbjct: 156 NATGHMAAKKLQGEA--STNIMAFESQPIAIQEMLNGNVDAAIGDNAVVYEYIKAHPDQK 213 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 VI D K + +G+ E + ++ Sbjct: 214 IKVIQDDAFEKEYYGFMVQKGNKELLDKLNEGLK 247 >gi|150019609|ref|YP_001311863.1| extracellular solute-binding protein [Clostridium beijerinckii NCIMB 8052] gi|149906074|gb|ABR36907.1| extracellular solute-binding protein, family 3 [Clostridium beijerinckii NCIMB 8052] Length = 277 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 87/267 (32%), Gaps = 31/267 (11%) Query: 1 MYKDFFVSILCLIILFFTSFS----------------TNASILGDIKKRGFLKCGINTGL 44 M K ++ + + +F +S L DIK +G + G + Sbjct: 1 MKKFLLKKLIVFVAISSIAFGIIGCSSNTNSSGKNSDVKSSSLSDIKSKGKIVVGTSADY 60 Query: 45 VGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 + + G DV + ++ + + ++ ++ ++LQ+ + D++ Sbjct: 61 PPYEFHKEIDGKDQIVGIDVSIAKEVAKDLGVE---LEIKDMDFDGLLVSLQAGKSDLVF 117 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELT 159 + T R F I + FI+ K I S+ L I VQ G+ E Sbjct: 118 AAMNPTDER--RENADFSDIYNKEKNIFIVRKGEADSIKSMDDLKNKKIGVQKGSVQEGL 175 Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 + D + + ++ + + DA D N E + Sbjct: 176 VKDNLPSA----EVKGLGKATDLVLDLKNKKVDAILLDSPVAKFNCDKN-NDIELTSVTI 230 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHY 246 + A A+ +G TE ++ T Sbjct: 231 EAQEDGAAIAMRKGSTELQTEINKTIK 257 >gi|139437314|ref|ZP_01771474.1| Hypothetical protein COLAER_00453 [Collinsella aerofaciens ATCC 25986] gi|133776961|gb|EBA40781.1| Hypothetical protein COLAER_00453 [Collinsella aerofaciens ATCC 25986] Length = 286 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 98/279 (35%), Gaps = 44/279 (15%) Query: 1 MYKDFFVSILC----LIILFFTSFSTNASI--------------LGDI--------KKRG 34 M + + L T ++ + + + K G Sbjct: 1 MKLKKLGAFAATGAMALALALTGCGSSNATSGSDASSSSSDDAKVEKVDGSKEYALVKDG 60 Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G + F NGD++GFD++ +A+ + D ++Y+ + + S Sbjct: 61 TLTVGTSAEYAPFEYKDDNGDYQGFDLELIKAIGDKLGLD---VEYVNNDFDTLVPGVAS 117 Query: 95 K-QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS------GAS 147 + D+ T RE + F Y D Q + + S A+ Sbjct: 118 GAKYDVSIAAITDTPEREK--EVTFSDSYYMDDQAIVTKVDNTDITADNFSEKLNNADAT 175 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 I VQ+G+T E + F + ++ E +A ++ + DA + S A +LT Sbjct: 176 IIVQSGSTAEAFAQENFPKAK----IVPYKDATECFSALQSDKGDAVVTNRS--VASQLT 229 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 ++ + + I + A AI QG+T+ + ++ Sbjct: 230 AEQFNTCQTIKQISTGEEYAIAINQGNTKLKDDINQAIK 268 >gi|319763455|ref|YP_004127392.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|317118016|gb|ADV00505.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] Length = 251 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 73/211 (34%), Gaps = 12/211 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ G + V NG GFD++ A++ A+ +++++ ++ K L S Sbjct: 29 VLRVGTDATFPPMEFV-ENGKRTGFDIELVEAIAKAMGK---QVEWVDIDFKGLIPGLIS 84 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 ++ D+ T R + P + I +S L G + VQ GT Sbjct: 85 RRFDMAVSAIYITDERRKVVDFT-EPYYAGGLVAMVKESNTSIRKLSDLDGKRVSVQVGT 143 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + L + K I E+ +E+ R DA A Y T Sbjct: 144 KSVGFLTQ----NYPKVQRIEVEKNQEMFNLVDIGRADAAVTGKPAAYQYVRTRPG---L 196 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 +L + ++ A+ + E V+ Sbjct: 197 RVLEEQLTTEEYGMALRKDTPELTKAVNAAL 227 >gi|113866078|ref|YP_724567.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113524854|emb|CAJ91199.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia eutropha H16] Length = 251 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 35/244 (14%), Positives = 77/244 (31%), Gaps = 19/244 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + L L + + + L+ + + NG GFDV Sbjct: 5 RKCLMAGLATLTALTLGTAAQA-------QDNAVLRVATDATFPPMEFI-ENGKRTGFDV 56 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + A++ + ++++ ++ K L S++ D+ T R + P Sbjct: 57 ELVEAMAKTMGK---RVEWTDIDFKGLIPGLVSRRFDMAVSGIYITPERRKVVDFT-EPY 112 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + + + + L+G + VQ GT + L D + + + E+ +E Sbjct: 113 YVGGLVALVKSGNTTVHAPADLNGKKVSVQVGTKSVSFLRDTYP----QVQRVEVEKNQE 168 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + R DA A T ++ ++ A+ + E + Sbjct: 169 MFNLVEIGRADAAVTGKPAAMQYVKTRGG---LRMVEQQLTTEEYGMAVRKDTPELTRAL 225 Query: 242 SWTH 245 + Sbjct: 226 NAAL 229 >gi|152985756|ref|YP_001347035.1| cyclohexadienyl dehydratase precursor [Pseudomonas aeruginosa PA7] gi|150960914|gb|ABR82939.1| cyclohexadienyl dehydratase precursor [Pseudomonas aeruginosa PA7] Length = 268 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 77/252 (30%), Gaps = 18/252 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + ++ CL++L S S L I G L+ G F+ G + GFDV Sbjct: 5 IRHLIQALACLVLLASASLQAQESRLDRILDSGVLRVGSTGDYKPFSYRTEQGGYVGFDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L+ ++ +++ +P + L + DI L R+ F Sbjct: 65 DMAQRLAESLG---ARLVLVPTSWPSLMRDLADDRFDIAMSGISINLERQR--QAYFSMP 119 Query: 122 TYFDGQGFI----MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 DG+ I + G + V G T E + +AH + +V Sbjct: 120 YLRDGKTPITLCANQARFQTLEQIDRPGVTAIVNPGGTNE----KFARAHLKQARILVHP 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQ 232 I + D D + P + P A + Sbjct: 176 DNVTIFQQIVDGKADLMMTDAIETRLQSRLHPELCAVHPERPFDFAEKAYLLPRDEAFKR 235 Query: 233 GDTEWYNIVSWT 244 +W +I T Sbjct: 236 YVDQWLHIAEQT 247 >gi|86609571|ref|YP_478333.1| cystine ABC transporter, periplasmic cystine-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558113|gb|ABD03070.1| cystine ABC transporter, periplasmic cystine-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 287 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 89/262 (33%), Gaps = 28/262 (10%) Query: 9 ILCLIILFFTSFSTN--------ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 LCL + + S + + +L +++RG L+ ++ + +G W+GFD Sbjct: 11 ALCLTLAGCWALSAHQGSLLAQGSDLLAQVQERGVLRISTDSNYRPQSYRNPDGSWEGFD 70 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD R ++ + + +L +N + + D+ + T R+ L F Sbjct: 71 VDVAREIAKRLGVEAE---FLDINFDVITAGSWNGRWDVNVGSMTVTAERQK--ALLFTI 125 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-------P 173 Y+ F++H+ ++ ++ L G + V TT + L Sbjct: 126 PYYYTPASFVVHQASTLTDIAALEGKRVGVGTATTYQAYLEGNLTLEGETIQVPAPRVDI 185 Query: 174 IVFERVEEIDAAYRAH---RCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPA 229 +++ R DA + A++ L D + LA A Sbjct: 186 RIYDTDSLALQDLALGDGTRLDAVLTALPTAENAIREGLP----LKTLGDPVYYEALAVA 241 Query: 230 IIQGDTEWYNIVSWTHYAMVTA 251 + + + ++ + Sbjct: 242 LDRSSPAPSESLQAKINEILES 263 >gi|329297448|ref|ZP_08254784.1| cationic amino acid ABC transporter periplasmic-binding protein [Plautia stali symbiont] Length = 260 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 83/254 (32%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L + S AS+ + + L G + F A G GFD Sbjct: 1 MKKRVLALSLMLAM------SGAASVFAAVPQS--LCIGTDPTYPPFESKNAQGQLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + I +K Y+ + +L++K+ID + + T R+ + F Sbjct: 53 IDLANEICKRI---KTKCTYVESDFDALIPSLKAKKIDAIISSLSITEKRQEEIA--FSE 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K + ++ L G +I + GTT E +Y++ + P + Sbjct: 108 KLYAANARLVAPKGSKLQPTIESLKGKNIGLLQGTTQETYANEYWRPKGVTVTP--YANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + A R DA D L + + + + + D Sbjct: 166 DLVYQDLNAGRIDAAFQDEVQASEGFLKQPVGKNYAFAGPAVKDEKIFGVGTGMGLCKDD 225 Query: 235 TEWYNIVSWTHYAM 248 + + M Sbjct: 226 ADLKAAIDKAFNDM 239 >gi|325978616|ref|YP_004288332.1| polar amino acid transport system substrate-binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178544|emb|CBZ48588.1| polar amino acid transport system substrate-binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 271 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 83/253 (32%), Gaps = 16/253 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGD-IKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K F IL +I+ ++ S++ + I+ +G + + F + Sbjct: 1 MKKFFRGFILLIIVGSLSACSSSTGVSQSSIQDKGKIVIATESEFAPFEFKTLIDGKDTL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ A++ A+ D + ++ ++ S + DI T R+ Sbjct: 61 VGADIELGNAIADALGVDAD---FSVMSFNNVLASVTSGKADIAIAGISVTDERKK--AY 115 Query: 117 AFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K +++ L+G ++ Q G+ E D + Sbjct: 116 DFSDAYYEAENIVIIKKSDEATYTTLESLAGKAVGAQKGSIQENIAKDQLP----DSSLV 171 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E+ + ++ A + + ND + + A A +G Sbjct: 172 SLTSNGEMINELKNNQLQAVVLEKAIAEGYVSQNDDLMIADMTLESSDTDAYAVAFAKGT 231 Query: 235 TE-WYNIVSWTHY 246 + + V+ Sbjct: 232 DQDLIDTVNDVIK 244 >gi|330821143|ref|YP_004350005.1| extracellular solute-binding protein family 3 [Burkholderia gladioli BSR3] gi|327373138|gb|AEA64493.1| extracellular solute-binding protein family 3 [Burkholderia gladioli BSR3] Length = 267 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 79/252 (31%), Gaps = 15/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+K ++ + + A +L +K+ G LK + F A+G GFD Sbjct: 7 MFK---LACIAAWFGVAAGAAQAADLLDTVKQAGVLKIAMEGTYPPFDSRDASGKLVGFD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A+++ + P ++ LQ+ + D++ T R+ L F Sbjct: 64 VDVAKAVAARLGVKPE---FIATEWSGILAGLQAGKYDVIVNEVTITPPRK--QALDFSQ 118 Query: 121 ITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + I S+++ G T D + + Sbjct: 119 PYVYSAAQLIQRANDDRRFGSLAEFKGDKKLGVTLGTNY----DAMARAVPGINAQTYPG 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + R DA D + L T P + + + +G+ ++ Sbjct: 175 APEKLSDLVNRRIDATLDDRLMVPYLLKTTQLPLRAGAVVPGGGQE-MGIPFRKGNPKFA 233 Query: 239 NIVSWTHYAMVT 250 + AM Sbjct: 234 KALDDAISAMKQ 245 >gi|300311601|ref|YP_003775693.1| glutamine ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gi|300074386|gb|ADJ63785.1| ABC-type glutamine transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 251 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 83/251 (33%), Gaps = 25/251 (9%) Query: 1 MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + L +L + +A+ ++ G + V +G Sbjct: 1 MKTFSKLLCAGMASLSLLIAAVPAAHANGE-------VIRVGTDATFPPMEFV-KDGKRT 52 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDV+ AL+ + +Q++ ++ K L S + DI + T R + Sbjct: 53 GFDVELIEALAKTMGKK---VQWIDIDFKGLIPGLVSNRFDIAASAIYMTDERRKV--VN 107 Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y G ++ + I L+ G + VQ GT + L D F + Sbjct: 108 FSDPYYRGGLAVLVRRDDNSIKVPEDLNKGKRVSVQVGTKSVGYLKDNFP----GVERVE 163 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E+ + + R +A A T +L ++ A+ + DT Sbjct: 164 VEKNQAMFDLLATGRVNAVVTGRPAAVEYARTQP---LVRVLDKGLTTELYGFALRKSDT 220 Query: 236 EWYNIVSWTHY 246 E ++ Sbjct: 221 ELTAQLNKALQ 231 >gi|126437886|ref|YP_001073577.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium sp. JLS] gi|126237686|gb|ABO01087.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Mycobacterium sp. JLS] Length = 489 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 82/268 (30%), Gaps = 31/268 (11%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + S + IK G L+ G F+ A+G G+DVD RA++ I Sbjct: 18 SCASADDGSDEPIKSAGVLRVGTEGVYAPFSYHDASGQLVGYDVDVARAVADKIGVRAE- 76 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG- 136 ++ F AL++ + D+++ R + Sbjct: 77 --FVETPWDAMFAALEAGRFDVVANEVTINAERRA--KYDLSQPYSVGEGVIVTRADDDS 132 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+++ L+G A + ++ + + + + R D Sbjct: 133 IATLDDLAGKVAAENATS----NWSEVAREAGARVEAVE--GFTQAITLLNQGRVDVVVN 186 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 D A+YA + I + KS A + + Sbjct: 187 DSIAVYAYLAETGD-TSVKIAGTVGEKSEQGFAARKDSGLLPELNRA------------- 232 Query: 257 TQKNINQVSKDTTNPDV-QRFLGIDKSS 283 ++++ D T ++ QR+L + S Sbjct: 233 ----LDELRADGTLAEISQRYLKANASG 256 >gi|81429106|ref|YP_396106.1| putative glutamine/glutamate ABC transporter, membrane-spanning/substrate-binding subunit precursor [Lactobacillus sakei subsp. sakei 23K] gi|78610748|emb|CAI55799.1| Putative glutamine/glutamate ABC transporter, membrane-spanning/substrate-binding subunit precursor [Lactobacillus sakei subsp. sakei 23K] Length = 478 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 94/303 (31%), Gaps = 15/303 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L++ F S + +K + G + F + + G D Sbjct: 1 MKKITLFLSSLLLLGLFVFGSQQVQSVQAAEKTYEI--GTDVTYPPFEFANKDNKYVGID 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + + K+ PL A+QS QID + T R+ F Sbjct: 59 IDIMKAIAKS---EGFKVNIQPLGFNAAVQAVQSGQIDGVIAGMTITDERKA--KFDFAD 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + K I+ + L G + ++ GT K + + F+ + Sbjct: 114 PYYHTGVVMAVKKDSKITGLKGLKGQRVAIKTGTAAGDYAKSKAKEYGF--TTVTFDDSD 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYN 239 + A D + + I+ + + A+ + + E Sbjct: 172 NMYNDVVNGNSVACFEDEPVM---QYGIKTGLGLKIVTNPVQGGDYGFAVKKGTNPELVA 228 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL-GLTKDWTYR 298 + + + E Q + F G+ K N G L GL + Sbjct: 229 KFNKGLKKLKASGEYAKIQAKYLNTKASSEKEADHSFFGLLKE-NKGAILDGLGQTLLLT 287 Query: 299 IIR 301 +I Sbjct: 288 VIA 290 >gi|238898833|ref|YP_002924515.1| arginine transport protein (ABC superfamily, peri_bind) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466593|gb|ACQ68367.1| arginine transport protein (ABC superfamily, peri_bind) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 249 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 87/250 (34%), Gaps = 24/250 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L+ L + L ++ L+ F + A+ + +GFD Sbjct: 1 MKKLVLSVFFALVSLAIS--------LSVFAEKKILRFATEASYPPFEFMSAHNEIEGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + ++ +L+S++ID + D T R + F Sbjct: 53 IDLAKALCQKM---QIECVFVNQAFDSLIPSLKSRRIDAVIAGLDITPERSKQVA--FTI 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + FI+ + + L G + +Q G+T + L D PI + + Sbjct: 108 PYCKNSALFIIQTG-KFAGIDDLQGKRVGMQNGSTHQKFLMDEHPE----MIPISYSTYQ 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R DA GD +A+ + P+ + I + L A+ Q D Sbjct: 163 NAILDLKNGRLDAVFGDTAAVNQWLI--KNPTLGALGNKITDSNYFGVGLGIAVKQADDS 220 Query: 237 WYNIVSWTHY 246 N ++ Sbjct: 221 LLNKLNEAIK 230 >gi|223041391|ref|ZP_03611595.1| putative amino-acid ABC transporter-binding protein [Actinobacillus minor 202] gi|223017781|gb|EEF16187.1| putative amino-acid ABC transporter-binding protein [Actinobacillus minor 202] Length = 260 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 84/247 (34%), Gaps = 13/247 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K V L + L ++ S S+L I +G + G F NG G+ Sbjct: 1 MLKKLSVIALTTLALATSATSFAKESLLERINNKGTITVGTEGTYAPFTYHDENGKLTGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ RA++ + +++ N L++ + D+++ T E Sbjct: 61 DVEVTRAIADKLGVK---VEFKETNWDSMLAGLKADRFDLVANQVALT-SPERQATFDKT 116 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G K I V + G Q+ T+ LA ++A + + Sbjct: 117 EPYNWSGAVLAAPKDETRIKKVEDVKGLK-AAQSLTSNYGELARKYEA-----VIVPVDG 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R D +T + S L + S+ I + K +G+ E Sbjct: 171 LAQSVKVIETKRAD-FTFNDSLAVLDYLKKNPKSDLKIFWESSDKVGAGLVANKGNQEAL 229 Query: 239 NIVSWTH 245 + +S Sbjct: 230 DKISAVI 236 >gi|91786939|ref|YP_547891.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91696164|gb|ABE42993.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 249 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 79/211 (37%), Gaps = 14/211 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L+ G + V NG GFDV+ A++ A+ +++++ ++ K L SK Sbjct: 29 LRVGTDATFPPMEFV-ENGKRTGFDVELVEAIAKAMGK---QVEWVDIDFKGLIPGLMSK 84 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGT 154 + D+ T R+ + F Y G + + I ++ L G + VQ GT Sbjct: 85 RFDMAVSAIYITDERKKV--VDFTNSYYAGGLVAMTKEGNTAIKKLADLEGKKVTVQVGT 142 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + L +++ I E+ +E+ R DA A + RP Sbjct: 143 KSVGYLQEHYPK----VQRIEVEKNQEMFNLVDIGRADAAVTGKP--AAFQYVRTRPG-L 195 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 +L + ++ A+ + E V+ Sbjct: 196 RVLEEQLTTEEYGMALRKDTPELTRAVNGAI 226 >gi|238788815|ref|ZP_04632606.1| Glutamine-binding periplasmic protein [Yersinia frederiksenii ATCC 33641] gi|238723120|gb|EEQ14769.1| Glutamine-binding periplasmic protein [Yersinia frederiksenii ATCC 33641] Length = 247 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 85/251 (33%), Gaps = 22/251 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M VS+ L + F S L +T V F + + + GFD Sbjct: 1 MKSLVKVSLAALTLAFAVSSHAAE---------KELIVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + K P++ ALQ+K +D+ T R+ + F Sbjct: 51 IDLWDAIAKKL---DLKYTLKPMDFSGIIPALQTKNVDLALAGITITDERKK--AVDFSD 105 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I + L+G + V++GT + DY KA+ F + Sbjct: 106 GYYNSGLLVMVKADNNDIKGEADLAGKVLAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + T + + + I A QG ++ Sbjct: 162 DNAYLELGTGRADAVLHDTPNILYFIKTAGNG-QFKAVGESIKAQQYGVAFPQG-SDLRE 219 Query: 240 IVSWTHYAMVT 250 V+ ++ Sbjct: 220 KVNAALKSLKE 230 >gi|83592631|ref|YP_426383.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC 11170] gi|83575545|gb|ABC22096.1| extracellular solute-binding protein, family 3 [Rhodospirillum rubrum ATCC 11170] Length = 292 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 76/246 (30%), Gaps = 10/246 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L+ + S NA L DIKK G +K F ++ + + G D D Sbjct: 22 KAMVAGAAALMTMVAASLPANADTLEDIKKAGVIKAATEMQFPPFDFLEGD-KYVGVDRD 80 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 ++ + ++Y+ L L++ + D++ T R F Sbjct: 81 LMDEVAKELGVK---VEYIDLPWTSVLPGLEAGKFDLVIAPVTITKERLARYA--FTLPI 135 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + I+ ++G +I GT+ + +Y A K + + Sbjct: 136 SEGTAALMKRADDDSITKPEDIAGKTIGGGKGTSQLGQIKEYAAALPGKVEFKEYVDSNQ 195 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII--QGDTEWYN 239 A A R DA L + V+LP + + + D Sbjct: 196 SYADLAAGRVDASVNSYPNLAYAAAQRPE-TFAVVLPPFGKTTYFSWVSRLGEKDASLVE 254 Query: 240 IVSWTH 245 V+ Sbjct: 255 AVNAAL 260 >gi|42518711|ref|NP_964641.1| ABC transporter permease component [Lactobacillus johnsonii NCC 533] gi|41582997|gb|AAS08607.1| ABC transporter permease component [Lactobacillus johnsonii NCC 533] Length = 497 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 40/264 (15%), Positives = 89/264 (33%), Gaps = 28/264 (10%) Query: 1 MYKDFFVSILCLIILFFTSFS--------------TNASILGDIKKRGFLKCGINTGLVG 46 M K +S +++FF+ + S+L IKK G L G + Sbjct: 1 MKKTKLLSFFFALLMFFSLGATFIKPAQAASQKQVAEGSVLKKIKKSGELVVGTSADYPP 60 Query: 47 FAEV---KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 + G D++ + ++ + + ++ +AL++ ++D++ Sbjct: 61 LEFTASENGKTKYVGVDIELAKDIAKDLGVK---LVIKNMSFDSLLVALETGKVDMVISA 117 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLAD 162 T R+ S+ + + K +S+ L G ++ Q G+ + Sbjct: 118 MTPTPERKQSVAFSKIYYKPSGEYFLVNKKDKDKYTSIQSLKGQTVGAQTGSNQYNLVKS 177 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDII 221 K ++ + A ++ + A + A N + H L + Sbjct: 178 QMK----DSKLKGLGKINNLVLALQSGKVSAVVVEELIAKAYAENNSGLAAVHSNLKETQ 233 Query: 222 SKSPLAPAIIQGDTEWYNIVSWTH 245 + + A AI +G + V+ T Sbjct: 234 AGN--AVAIAKGQDDLVAQVNKTI 255 >gi|330820140|ref|YP_004349002.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Burkholderia gladioli BSR3] gi|327372135|gb|AEA63490.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Burkholderia gladioli BSR3] Length = 269 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 77/229 (33%), Gaps = 11/229 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 F + + A L I K G L+ + F V A+ +G+D+D L+ ++ Sbjct: 27 FGANAAQADALDTITKSGTLRVAVPEDYPPFGSVGADMQPQGYDIDTAALLAKSLGVK-- 84 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 +Q +P+N+ R L + ++D++ + T RE + F QG Sbjct: 85 -LQLVPVNSANRIPYLTTNKVDLVISSLGKTPDREKV--IDFSAAYGPYFQGVFGPADIK 141 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 ++ + L+G ++ G E+ L FE A+ + + Sbjct: 142 VAGPADLTGKTVGATRGALEEIALTQMAP----NATIKRFEDNNATIQAFLSGQVQLIAA 197 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A+ P +I SP + + + V Sbjct: 198 GNIVAAAILAR--NPPRRPETKFVIKNSPCFVGLNKNEPRLLAKVDAAI 244 >gi|319780440|ref|YP_004139916.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166328|gb|ADV09866.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 258 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 75/250 (30%), Gaps = 17/250 (6%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F + + T + AS L+ G F A+G GFD+D Sbjct: 2 RLFGRFVLAASVALTLATGAASAQDK-----KLRIGTEGAYPPFNYASADGTLGGFDIDL 56 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 +AL + + ++ ++ + ALQ+ + D + T+ E + + F Y Sbjct: 57 GKALCAEM---KAECEFSVQDFDGSIPALQAGKFDAIIN---ITITPERAEKVEFTHKYY 110 Query: 124 FDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + K I +S L G ++ VQ T + + ++ Sbjct: 111 QTPPAIAVPKDSTIAGTSPEDLKGKALGVQTATIH----QKFADQKYAGSTVKAYPTGDD 166 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 R DA L D ++ + P + + + Sbjct: 167 ARTDMANGRLDAIMDGSIILTEWLKKPDGACCKLLGTLTADPAIHGPGVGIALQKGNKEL 226 Query: 242 SWTHYAMVTA 251 + A + A Sbjct: 227 ADKLNAAIDA 236 >gi|300214734|gb|ADJ79150.1| Polar amino acid ABC transporter, substrate binding protein [Lactobacillus salivarius CECT 5713] Length = 285 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 36/257 (14%), Positives = 81/257 (31%), Gaps = 18/257 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKC-----------GINTGLVGFAE 49 M K + L L + + + + G G++ V Sbjct: 1 MKKIVKIITCLLAFLIVGATLAGCTNVRK-RANGQDNWKKIEKKKKVVIGLDDSFVPMGF 59 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 + +G GFDVD R + D + + ++ + L++ ID++ Sbjct: 60 REKDGSLVGFDVDLAREVFKRYGID---VDFQTIDWSMKETELRNGTIDLIWNGYTVNPE 116 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT-TELTLADYFKAHN 168 R+ ++ F + Q + KK+ + + G ++ +Q+G++ E ++ N Sbjct: 117 RKKTVA--FSVPYLRNQQVLVSKKKENVYDAKSMKGKALGLQSGSSGYESYMSQPKLLKN 174 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + ++ A+R D P+ + I A Sbjct: 175 YVKEAVQYDTFNNAFLDLNANRIQGLLIDSVYADYYVAHEPDPNSYRISDVGFESENFAV 234 Query: 229 AIIQGDTEWYNIVSWTH 245 + +GD ++ Sbjct: 235 GMRKGDKTLQKKINVAL 251 >gi|253689717|ref|YP_003018907.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756295|gb|ACT14371.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 261 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 83/245 (33%), Gaps = 12/245 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K FV LC L T T+A G F A + +GFD+ Sbjct: 3 KKLLFVGALCATALSTTVLPTSAFAAEP-----TYVVGSGGTYRPFEFENAQKELEGFDI 57 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +A++ A + I+ + + F L S DI+ T R+ + F Sbjct: 58 DIIKAIAKA---ENFNIKLVNTPWEGIFATLNSGDRDIIISGITITDKRKQM--VDFSAP 112 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + Q ++ K I S++ L + V +T ++ ++D + F+ Sbjct: 113 YFPAEQSIVVPKGSTIDSIAALKDHKVGVVNSSTADVVVSDVLGKN--STSIKRFDNTPL 170 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + A GD+ + T+ +++ + A+ +G+ + + Sbjct: 171 MLQELYEDGVGAAVGDVGVVKFYIKTHPEKQFNLVSDAKFERQYFGIAVAKGNDQLREKI 230 Query: 242 SWTHY 246 + Sbjct: 231 NAGLK 235 >gi|156973840|ref|YP_001444747.1| hypothetical protein VIBHAR_01550 [Vibrio harveyi ATCC BAA-1116] gi|156525434|gb|ABU70520.1| hypothetical protein VIBHAR_01550 [Vibrio harveyi ATCC BAA-1116] Length = 258 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 44/226 (19%), Positives = 76/226 (33%), Gaps = 14/226 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + K+ ++ GI F+ + +G KGFDVD AL + + Q + + Sbjct: 18 SGVAQAKEWKTVRFGIEGAYPPFSWTETDGSLKGFDVDMANALCQEMKVE---CQIVAQD 74 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 +L +++ D + T R+ + F FI K + L Sbjct: 75 WDGIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGANL-DFDNLD 131 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G I VQ TT + L D + K + + +E R A GD SAL Sbjct: 132 GQKIAVQRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEG 188 Query: 205 KLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 L + + ++ A+ + D + + Sbjct: 189 VLNKAGGKAYEFVGPSLTDPKWFGDGFGIAVRKQDKDLTKKLDAAI 234 >gi|260598730|ref|YP_003211301.1| ABC transporter lysine/arginine/ornithine binding periplasmic protein [Cronobacter turicensis z3032] gi|260217907|emb|CBA32484.1| Lysine-arginine-ornithine-binding periplasmic protein [Cronobacter turicensis z3032] Length = 260 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 89/279 (31%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L + S ++ G + F+ A GD+ GFD Sbjct: 1 MKKKVLAFSLLLGLSTSASVFAALPQ--------TVRIGTDATYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + I K ++ + +L++K+ID + + T R+ + F Sbjct: 53 IDLGNEMCKRI---QVKCTWVGSDFDSLIPSLKAKKIDAIISSLSITEKRQKEIA--FSD 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I ++ L G + V G+T E + ++ + ++ Sbjct: 108 KLYAADSRLIAAKGATIQPTIESLKGKHVGVLQGSTQEAYANEKWR--GKGVDVVAYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + A R DA D A L E+ + + + D Sbjct: 166 DLIYSDLSAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKNYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E E+ ++++K + +V Sbjct: 226 AELKAAFDKAL------GEIRKDGT-YDKMAKKYFDFNV 257 >gi|148273812|ref|YP_001223373.1| putative polar amino acid ABC transportersubstrate-binding protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831742|emb|CAN02711.1| putative polar amino acid ABC transporter,substrate-binding protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 282 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 75/233 (32%), Gaps = 15/233 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD--WKGFDVDFCRALSSAIFD 73 + A+ L D+K +G L G F+ + +G G+DV+ A++ + Sbjct: 39 GTSGTPAAATSLSDVKAKGELVIGTEGTYSPFSFHEGSGSGALTGYDVEVATAVADKLGV 98 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH- 132 P + F L++ + D+++ T R+ F I+ Sbjct: 99 KP---VFEETQFDGIFAGLEAGRWDVIANQISITDERKTV--YDFSEPYTVSPGVIIVKG 153 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 GISS + L+G + Q+ T+ LA A E + + R D Sbjct: 154 SDSGISSFADLAGKTTA-QSLTSNWNELATQSGAK-----VEAVEGFAQAVTLLQQGRVD 207 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A D S+ + + S A +G + V Sbjct: 208 ATINDR-LTLLDYQKQQGDSDLQVAAETDDPSLSALVFRKGSDDLVTAVDQAL 259 >gi|769791|emb|CAA60102.1| artI [Escherichia coli K-12] Length = 244 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 86/250 (34%), Gaps = 30/250 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L T+ ++ F + AN GFD Sbjct: 1 MKKVLIAALIAGFSLSATAAE-------------TIRFATEASYPPFESIDANNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL I + + +L+ ++++ + D T RE + F Sbjct: 48 VDLAQALCKEI---DATCTFSNQAFDSLIPSLKFRRVEAVMGGMDITPEREK--QVLFTT 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASI-CVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + F+ + +SV QL G + VQ GTT + + D + ++ Sbjct: 103 PYYDNSALFVGQQG-KYTSVDQLKGKKVRSVQNGTTHQKFIMDKHPE----ITTVPYDSY 157 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDT 235 + R D GD + ++ D P V+ + K L A+ QG+T Sbjct: 158 QNAKLDLENGRIDGVFGDTAVVHEWL--KDNPKLVVVGDKVTDKDYFGTGLGIAVRQGNT 215 Query: 236 EWYNIVSWTH 245 E ++ Sbjct: 216 ELQQKLNTAL 225 >gi|242279755|ref|YP_002991884.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] gi|242122649|gb|ACS80345.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] Length = 247 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 76/248 (30%), Gaps = 24/248 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K + + LI + G L +T F G GF Sbjct: 1 MKKLLSIIVAALITATMVGTAFA----------GKLTVACDTSFPPFEFKDPATGKHTGF 50 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ A++ I D P++ LQS Q+D+ R + F Sbjct: 51 DVELWEAIAKKIGADYD---LQPMDFNGIIPGLQSNQLDVGIAGITIKPERAKV--VDFS 105 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ K ++ + L G I + T++ AD+ K K ++ Sbjct: 106 DGYYNSGLLILVKKDENSVNGIEDLKGKIIATKLSTSS----ADFAKTAGAK-EVKLYPN 160 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + DA D + + V+ P + + A +G + Sbjct: 161 NDAMFMELMTGGADAVIFDSPVIADFMRKAGKGQVKVVGP-LYNGQQYGIAFPKG-SSLV 218 Query: 239 NIVSWTHY 246 V+ Sbjct: 219 AKVNAALK 226 >gi|254411623|ref|ZP_05025399.1| Bacterial extracellular solute-binding protein, family 3 [Microcoleus chthonoplastes PCC 7420] gi|196181345|gb|EDX76333.1| Bacterial extracellular solute-binding protein, family 3 [Microcoleus chthonoplastes PCC 7420] Length = 260 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 89/241 (36%), Gaps = 12/241 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V + + + S + L +I++RG L + L A G +G ++D R Sbjct: 11 VVLGLMGVAVLQPPSAYPAELAEIEQRGQLIVAVKDNLRPLGFRDATGSLQGLEIDIARR 70 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L+ + P + P+ ++R + Q+DI T R + F Y DG Sbjct: 71 LAKELLGSPEAVVLQPVANRDRLSVVVEDQVDIAIARVTVTDSRARL--VDFSIPYYLDG 128 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 G I + I+ +S L +I V G++T + + + +E Sbjct: 129 AGIITNDAS-INLLSDLDNQTIAVIKGSSTIPVIKYALP----NAQLVGVDSYQEALFLL 183 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIVSWT 244 A +A+ D + L ++ +LP +S + LA + + TE V+ Sbjct: 184 EAGEANAFAADQTVLTGWVQQYP---DYRLLPYRLSGAALAIVMPKGLQYTELRQQVNQA 240 Query: 245 H 245 Sbjct: 241 I 241 >gi|160943013|ref|ZP_02090251.1| hypothetical protein FAEPRAM212_00490 [Faecalibacterium prausnitzii M21/2] gi|158445707|gb|EDP22710.1| hypothetical protein FAEPRAM212_00490 [Faecalibacterium prausnitzii M21/2] Length = 275 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 51/276 (18%), Positives = 94/276 (34%), Gaps = 35/276 (12%) Query: 1 MYKDFFVSI----LCLIILFFTSFST---NASI--------LGDIKKRGFLKCGINTGLV 45 M + F+S+ +L T S+ AS L I+K G L + Sbjct: 1 MKRRTFISLMGVMAAAGVLSLTGCSSKDTAASTASSAPLNKLDSIQKSGKLVVALEGAWQ 60 Query: 46 GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 ++ A+ G+DV+ RA++ + +P Y+ + F L + + D++ + Sbjct: 61 PWSYHDASDTLVGYDVEVSRAIAEKLGVEPE---YVESDWDSLFAGLDAGRYDMVCNGVE 117 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYF 164 T R + F + + K I S L G + +T LA+ + Sbjct: 118 VTEERAKTYA--FTTPYGYIHTALAVRKDNEDIHSFEDLKGKTTANSLASTYME-LAESY 174 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 A + +EE A R DA + Y + + ++ S Sbjct: 175 GA-----TVQGIDTLEETIQLLTAGRIDATLNADVSFYDYLNVHPDA-DFKLVAQTAEAS 228 Query: 225 PLA-PAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 +A P + DT + + ++ EEL Sbjct: 229 HVAIPVLKSEDTAYLDALNTAI------EELRADGT 258 >gi|256253345|ref|ZP_05458881.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella ceti B1/94] gi|261220463|ref|ZP_05934744.1| extracellular solute-binding protein [Brucella ceti B1/94] gi|260919047|gb|EEX85700.1| extracellular solute-binding protein [Brucella ceti B1/94] Length = 240 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 82/248 (33%), Gaps = 18/248 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + +I + + ++ ++ F V ++G +G D Sbjct: 1 MLKAIVFAGIASVIAVLPAQA---------REWKEIRIATEGAYPPFNFVASDGSLQGLD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL A+ +K + + L+S + D + + T R+ + F Sbjct: 52 VDIAKALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 106 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + K I+S G ++ Q TT D + ++ Sbjct: 107 KYYSTPLSVAVPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E +A ++ R D D + + +I +++ A A+ GD + Sbjct: 165 ADEANADLKSGRLDTVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTAVALRLGDDDLR 224 Query: 239 NIVSWTHY 246 + Sbjct: 225 EQFNAAIK 232 >gi|319792887|ref|YP_004154527.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315595350|gb|ADU36416.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 270 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 40/273 (14%), Positives = 75/273 (27%), Gaps = 22/273 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRG-------FLKCGINTGLVGFAEVKANG 54 + + L+ L + L G + F G Sbjct: 5 RRLTLTAASLLVGLALAGCGKQEAAAPAAASAPPPPAAARVLVVGTDAAYAPFESQNEKG 64 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D +A++ + ++++ + F +L D+L + T R Sbjct: 65 EVVGFDIDVVKAVAQKAGIE---VKFVNTPWEGIFNSLDQGDRDLLVSSITITDER--RQ 119 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F P + Q + ++ + + VQ GTT + + N Sbjct: 120 TMDFSPPYFEARQLIAVKSDSPVAKFDDIKTLKVGVQNGTTGDEVVGKLLGKSNTA--IK 177 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 FE A A D + N + A+ +G+ Sbjct: 178 RFESTPLALKELEAGGVQAVVADNGVVAHYLANNAGGGFKTVSDAGFPSEQYGIAVKKGN 237 Query: 235 TEWYNIVSWTH--------YAMVTAEELGITQK 259 E + YA + A G K Sbjct: 238 AELLAKIDKGLADIKADGTYAKIYASHFGAASK 270 >gi|304397411|ref|ZP_07379289.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. aB] gi|304355029|gb|EFM19398.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. aB] Length = 263 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 89/241 (36%), Gaps = 21/241 (8%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L + ++ +F A I++ ++ ++ F G GFD+D AL + Sbjct: 12 LAVAVMAGCAFGAQA----KIEQ---VRFAVDPTYPPFESKTPQGKLVGFDIDLGNALCT 64 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + +K ++ AL++++ D + + T R + F Y Sbjct: 65 QM---QAKCVWVESQFDGMIPALKARKFDAILSDMGITEER--LKQINFTVPLYDTHTQL 119 Query: 130 IMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 I K GI +V L G ++ V+ GT E ++ H + + ++++ + Sbjct: 120 IARKGSGILPTVESLKGKTVGVEQGTVQERYALAKWQPHG--VTVVPYGDQAQVESDLVS 177 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSW 243 R DA D + L + + + L I + P+ A + +GD E + Sbjct: 178 GRLDAVFTDAAQAAIGFLKHPQGKDF-ELAGPIIQDPIIGPGTAIGLRKGDEELKTALDN 236 Query: 244 T 244 Sbjct: 237 A 237 >gi|86149797|ref|ZP_01068026.1| cjaC protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|85839615|gb|EAQ56875.1| cjaC protein [Campylobacter jejuni subsp. jejuni CF93-6] Length = 251 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 76/238 (31%), Gaps = 16/238 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++++ L+ LF + S + + + LK G F N GFD Sbjct: 1 MKKILSIALVALVGLFLGACSDSKN--KESNASVELKVGTAPNYKPFNYK-ENSKLTGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR- 119 D ++ + KI ++ N AL++ +ID+++ T R + F Sbjct: 58 TDLVEEIAKK---NGIKIVWVETNFDGLIPALKAGKIDMIASAMSATDER--RQSVDFTK 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 P + + + + L G I VQ GT L + + + Sbjct: 113 PYYMSKNLYLKLKNNDSLQTKNDLEGKKIGVQLGT-----LQENTAKAIKNAQVQSNKDL 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A + ++ DA D + P + + A + + Sbjct: 168 NIAVLALKNNKIDAIVADQDTAKGFLA--ENPELVSFCQETDGGEGFSFAFDKNKQKN 223 >gi|227517724|ref|ZP_03947773.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis TX0104] gi|229546597|ref|ZP_04435322.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis TX1322] gi|229548704|ref|ZP_04437429.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis ATCC 29200] gi|255971218|ref|ZP_05421804.1| amino acid ABC transporter [Enterococcus faecalis T1] gi|255973841|ref|ZP_05424427.1| aminoacid ABC transporter [Enterococcus faecalis T2] gi|256617647|ref|ZP_05474493.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis ATCC 4200] gi|256854374|ref|ZP_05559738.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256957372|ref|ZP_05561543.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis DS5] gi|256959892|ref|ZP_05564063.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis Merz96] gi|257086118|ref|ZP_05580479.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis D6] gi|257089189|ref|ZP_05583550.1| ABC amino acid transporter [Enterococcus faecalis CH188] gi|257415331|ref|ZP_05592325.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis AR01/DG] gi|257421017|ref|ZP_05598007.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|293384723|ref|ZP_06630577.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Enterococcus faecalis R712] gi|293387465|ref|ZP_06632017.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Enterococcus faecalis S613] gi|294781574|ref|ZP_06746911.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|300862075|ref|ZP_07108155.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|307269814|ref|ZP_07551144.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|307276261|ref|ZP_07557389.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|307284476|ref|ZP_07564638.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|307289545|ref|ZP_07569490.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|312900356|ref|ZP_07759667.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|312904217|ref|ZP_07763379.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|312908578|ref|ZP_07767521.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|312910503|ref|ZP_07769348.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|312951870|ref|ZP_07770759.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|227074829|gb|EEI12792.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis TX0104] gi|229306170|gb|EEN72166.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis ATCC 29200] gi|229308287|gb|EEN74274.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis TX1322] gi|255962236|gb|EET94712.1| amino acid ABC transporter [Enterococcus faecalis T1] gi|255966713|gb|EET97335.1| aminoacid ABC transporter [Enterococcus faecalis T2] gi|256597174|gb|EEU16350.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis ATCC 4200] gi|256709934|gb|EEU24978.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256947868|gb|EEU64500.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis DS5] gi|256950388|gb|EEU67020.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis Merz96] gi|256994148|gb|EEU81450.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis D6] gi|256998001|gb|EEU84521.1| ABC amino acid transporter [Enterococcus faecalis CH188] gi|257157159|gb|EEU87119.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis ARO1/DG] gi|257162841|gb|EEU92801.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|291077973|gb|EFE15337.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Enterococcus faecalis R712] gi|291083116|gb|EFE20079.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Enterococcus faecalis S613] gi|294451352|gb|EFG19817.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|295114022|emb|CBL32659.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)/amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Enterococcus sp. 7L76] gi|300848600|gb|EFK76357.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|306499506|gb|EFM68878.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|306503153|gb|EFM72407.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|306507061|gb|EFM76203.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|306513924|gb|EFM82526.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|310625464|gb|EFQ08747.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|310630168|gb|EFQ13451.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|310632313|gb|EFQ15596.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|311289199|gb|EFQ67755.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|311292544|gb|EFQ71100.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|315025741|gb|EFT37673.1| ABC transporter, permease protein [Enterococcus faecalis TX2137] gi|315031474|gb|EFT43406.1| ABC transporter, permease protein [Enterococcus faecalis TX0017] gi|315036139|gb|EFT48071.1| ABC transporter, permease protein [Enterococcus faecalis TX0027] gi|315145263|gb|EFT89279.1| ABC transporter, permease protein [Enterococcus faecalis TX2141] gi|315148141|gb|EFT92157.1| ABC transporter, permease protein [Enterococcus faecalis TX4244] gi|315151540|gb|EFT95556.1| ABC transporter, permease protein [Enterococcus faecalis TX0012] gi|315153184|gb|EFT97200.1| ABC transporter, permease protein [Enterococcus faecalis TX0031] gi|315154902|gb|EFT98918.1| ABC transporter, permease protein [Enterococcus faecalis TX0043] gi|315161961|gb|EFU05978.1| ABC transporter, permease protein [Enterococcus faecalis TX0645] gi|315164648|gb|EFU08665.1| ABC transporter, permease protein [Enterococcus faecalis TX1302] gi|315170674|gb|EFU14691.1| ABC transporter, permease protein [Enterococcus faecalis TX1342] gi|315578044|gb|EFU90235.1| ABC transporter, permease protein [Enterococcus faecalis TX0630] gi|323479955|gb|ADX79394.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis 62] gi|327534349|gb|AEA93183.1| amino acid ABC superfamily ATP binding cassette transporter, binding/permease protein [Enterococcus faecalis OG1RF] gi|329577603|gb|EGG59036.1| ABC transporter, permease protein [Enterococcus faecalis TX1467] Length = 722 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 79/236 (33%), Gaps = 14/236 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ ++++ +F + S + KK G + F + G + G D Sbjct: 1 MKRKHFLLSFFVMMVTLLTFISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + + PL A+QSKQID + T R+ F Sbjct: 58 VDLLDAIAKDQGFE---VDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKK--SFDFSD 112 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K I S L G ++ + GT + L Y F+ Sbjct: 113 PYFDSGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKN--KEKYDYTIKNFDDA 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + A DA D L + ++ D + S A+ +G Sbjct: 171 TGLYKALENGEADAIVDDYPV---LGYAVKNGQKLQLVGDKETGSSYGFAVKKGQN 223 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 76/241 (31%), Gaps = 13/241 (5%) Query: 18 TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ + I K+ ++ F A GD+ G DVD + ++ + Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQGDYVGIDVDLVKR-AAELQG--F 313 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135 +++ + A++S Q D + T R+ F + G + K Sbjct: 314 TVEFKFIGFSSAVQAVESGQADGMVAGMTITDDRKK--AFDFSVPYFDSGIQIAVKKGND 371 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L G + V+ GT + L Y + + + +A DA Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAMM 429 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254 D + + ++P I + A+ + + E + + M E Sbjct: 430 DDYPVI-GYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486 Query: 255 G 255 Sbjct: 487 D 487 >gi|119387390|ref|YP_918424.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119377965|gb|ABL72728.1| amino acid ABC transporter substrate-binding protein, PAAT family [Paracoccus denitrificans PD1222] Length = 269 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 97/242 (40%), Gaps = 7/242 (2%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + L L I+ A + IK+RG + I+ + + + G DV Sbjct: 5 RKAATAAGLVLGIVTGLVGPAAADVPAAIKERGKVLIAIDVSHPPYGMLDSQARETGSDV 64 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + + L+ + ++ +P++ R +L S+++D++ + T R+ + + Sbjct: 65 ETAKLLAEDMG---VALEIVPVSGANRVPSLLSRKVDMVIASFSITEERKKV--IDYSRP 119 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + GI++ + L+G ++ V GTT ++ L+ K + + +E Sbjct: 120 YGVIPVVISAPQDMGIAAPADLAGQALAVARGTTADIELSRIVKESGVNARIVRYEDEAT 179 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + A + +S A +++ P ++ + ++ P+A + +GD E V Sbjct: 180 TNTAVATGQQKILAAALST--ANEVSEQNPGLNLEVKLDMAAYPMAVGLRKGDDELKAWV 237 Query: 242 SW 243 Sbjct: 238 DE 239 >gi|53719990|ref|YP_108976.1| putative histidine-binding periplasmic protein precursor [Burkholderia pseudomallei K96243] gi|53725264|ref|YP_102388.1| amino acid ABC transporter periplasmic amino acid-binding protein [Burkholderia mallei ATCC 23344] gi|67641795|ref|ZP_00440562.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia mallei GB8 horse 4] gi|76809716|ref|YP_334223.1| amino acid ABC transporter periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710b] gi|121600313|ref|YP_993723.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei SAVP1] gi|124385987|ref|YP_001028819.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei NCTC 10229] gi|126449003|ref|YP_001081270.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei NCTC 10247] gi|126454248|ref|YP_001067028.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 1106a] gi|167001097|ref|ZP_02266898.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia mallei PRL-20] gi|167720493|ref|ZP_02403729.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei DM98] gi|167739479|ref|ZP_02412253.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 14] gi|167816688|ref|ZP_02448368.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 91] gi|167825092|ref|ZP_02456563.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 9] gi|167846595|ref|ZP_02472103.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei B7210] gi|167895180|ref|ZP_02482582.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 7894] gi|167903564|ref|ZP_02490769.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei NCTC 13177] gi|167911812|ref|ZP_02498903.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 112] gi|167919814|ref|ZP_02506905.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei BCC215] gi|217420404|ref|ZP_03451909.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 576] gi|226199966|ref|ZP_03795516.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei Pakistan 9] gi|237813138|ref|YP_002897589.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei MSHR346] gi|242317880|ref|ZP_04816896.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 1106b] gi|254178236|ref|ZP_04884891.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei ATCC 10399] gi|254184263|ref|ZP_04890853.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 1655] gi|254191297|ref|ZP_04897801.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei Pasteur 52237] gi|254195866|ref|ZP_04902292.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei S13] gi|254199287|ref|ZP_04905653.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia mallei FMH] gi|254205597|ref|ZP_04911949.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia mallei JHU] gi|254258072|ref|ZP_04949126.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 1710a] gi|254296923|ref|ZP_04964376.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 406e] gi|254357758|ref|ZP_04974031.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia mallei 2002721280] gi|52210404|emb|CAH36385.1| putative histidine-binding periplasmic protein precursor [Burkholderia pseudomallei K96243] gi|52428687|gb|AAU49280.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei ATCC 23344] gi|76579169|gb|ABA48644.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710b] gi|121229123|gb|ABM51641.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei SAVP1] gi|124294007|gb|ABN03276.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei NCTC 10229] gi|126227890|gb|ABN91430.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 1106a] gi|126241873|gb|ABO04966.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei NCTC 10247] gi|147748883|gb|EDK55957.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia mallei FMH] gi|147753040|gb|EDK60105.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia mallei JHU] gi|148026885|gb|EDK84906.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia mallei 2002721280] gi|157806747|gb|EDO83917.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 406e] gi|157938969|gb|EDO94639.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei Pasteur 52237] gi|160699275|gb|EDP89245.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei ATCC 10399] gi|169652611|gb|EDS85304.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei S13] gi|184214794|gb|EDU11837.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 1655] gi|217395816|gb|EEC35833.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 576] gi|225928022|gb|EEH24059.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei Pakistan 9] gi|237502755|gb|ACQ95073.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei MSHR346] gi|238522783|gb|EEP86225.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia mallei GB8 horse 4] gi|242141119|gb|EES27521.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 1106b] gi|243063051|gb|EES45237.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia mallei PRL-20] gi|254216761|gb|EET06145.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 1710a] Length = 264 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 75/219 (34%), Gaps = 13/219 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F +G GFD+D A+ + + K ++ ALQ Sbjct: 30 KEIRFGVEASYAPFEYKTPDGKLAGFDIDIGNAVCAKL---KVKCVWVENAFDGLIPALQ 86 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152 +++ D ++ + T R + F Y I K G + + + L G I V Sbjct: 87 ARKFDAINSDMTITEQRRK--AIDFTDPIYTIPNQLIAKKGSGLLPTTASLKGKRIGVLQ 144 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT E + + ++ + ++ R DA D A L+ + + Sbjct: 145 GTIQEAYAKKRWAPAG--VEVVPYQTQDLAYEDLKSGRLDATFQDSEAGAKGFLSKPQGA 202 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246 D +S + + + + D + + V+ Sbjct: 203 GFAFAGDHVSDAEILGTGVGFGMRKNDAQLKSAVNQALK 241 >gi|317125234|ref|YP_004099346.1| amino acid ABC transporter substrate-binding protein [Intrasporangium calvum DSM 43043] gi|315589322|gb|ADU48619.1| amino acid ABC transporter substrate-binding protein, PAAT family [Intrasporangium calvum DSM 43043] Length = 274 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 87/257 (33%), Gaps = 24/257 (9%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKAN 53 M + V+I + L + ++ G +K GI G Sbjct: 1 MKLRRTSAVAIATVAALGLAACGSDGG------NSGAAGGDKVKVGIKFDQPGLGLKTGA 54 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + GFDVD ++ + D ++++ + +R L++ Q+ + T R Sbjct: 55 -TYSGFDVDVANFIAKELNLD---VEFVEAVSAQRETLLKTGQVKYIVGTYSITEKR--M 108 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYH 172 ++F + GQ ++ + L G +C G+T+ + D + Sbjct: 109 ADVSFAGPYFIAGQDLLVRSDDTSITGKDTLDGKKLCSVKGSTSAQKIKDEIP----GVN 164 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + A ++ DA T D + L + + ++ + S + + Sbjct: 165 LQEYNTYSLCVDALKSGAVDALTTDDTILAGYAAQDTNKGKLKVVGNKFSTENYGVGVKK 224 Query: 233 GDTEWYNIVSWTHYAMV 249 GDTE+ N V + Sbjct: 225 GDTEFCNQVVTALKKFI 241 >gi|294497335|ref|YP_003561035.1| L-cystine import ABC transporter L-cystine-binding protein TcyA [Bacillus megaterium QM B1551] gi|294347272|gb|ADE67601.1| L-cystine import ABC transporter, L-cystine-binding protein TcyA [Bacillus megaterium QM B1551] Length = 273 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 69/229 (30%), Gaps = 13/229 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S+ + +KK G L G F GFDV+ + ++ + + Sbjct: 36 SSQGDLYNKVKKDGVLTIGTEGTYPPFTFHDDKQKLTGFDVELAQEVAKRLGVKAE---F 92 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISS 139 F L +K+ D+++ + F G I+ K + I S Sbjct: 93 KETQWDGMFAGLDAKRFDMIANEVGI--REDRQKKYDFSDPYIQSGAVLIVRKDEKDIKS 150 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G Q+ T+ +A + A+ E + A+R DA D Sbjct: 151 FKDLKGKKSA-QSLTSNYKDMAQSYGAN-----ITSAEGFAQAVELMSANRVDATINDKL 204 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + K + I + + + + + V+ M Sbjct: 205 SFLDYKKKHPNAP-IKIADEKSDGAASGFMFRKDSGKLVDEVNKALKDM 252 >gi|82751513|ref|YP_417254.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus RF122] gi|82657044|emb|CAI81481.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus RF122] Length = 485 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 95/283 (33%), Gaps = 25/283 (8%) Query: 3 KDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51 K IL L +L T+ + IK+RG L+ G++ G V Sbjct: 2 KCLIRFILVLGLLISSAMGYINPTAHAEQDQTWDKIKERGELRVGLSAGYAPMEFEHTVN 61 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++ G D+D + ++ + K++ + ++ AL++ +IDI+ TL R+ Sbjct: 62 GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTLERK 118 Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + F ++ K + + + Q GT E + Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228 R+ ++ A ++ + +A + A N + +V + + +A Sbjct: 173 NASITSLSRLPDVILALKSGKVEAAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + + + ++ T + + N D + Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273 >gi|269139579|ref|YP_003296280.1| arginine 3rd transport system periplasmic binding protein [Edwardsiella tarda EIB202] gi|267985240|gb|ACY85069.1| arginine 3rd transport system periplasmic binding protein [Edwardsiella tarda EIB202] gi|304559467|gb|ADM42131.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Edwardsiella tarda FL6-60] Length = 244 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 38/250 (15%), Positives = 84/250 (33%), Gaps = 25/250 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ + L F++ + ++ + F + A+ + GFD Sbjct: 1 MKK--LLACAIVAALSFSAQAAEN-----------IRFASSATYPPFESLDASNNIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + AL+ K+ D + D T R+ + F Sbjct: 48 IDLAKALCQEM---KANCTFNNQAFDSLITALKFKRYDAVISGMDITPERQKQVA--FTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K +++ + G + ++ GTT + L D P+ ++ + Sbjct: 103 PYYANSAIIIAQK-DKYHTIADMKGLRVGMENGTTHQKYLQDKHPE----IKPVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + N + + L A+ + Sbjct: 158 NAILDLKNGRIDGVFGDTAVVNEWLKNNPQLEAVGEHVTDPQYFGIGLGIAVRPDNQALL 217 Query: 239 NIVSWTHYAM 248 + ++ A+ Sbjct: 218 DQLNQALAAI 227 >gi|238758199|ref|ZP_04619378.1| Amino acid-binding protein [Yersinia aldovae ATCC 35236] gi|238703529|gb|EEP96067.1| Amino acid-binding protein [Yersinia aldovae ATCC 35236] Length = 262 Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 84/246 (34%), Gaps = 15/246 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+K + CL + S + A G F + +GFD Sbjct: 1 MFKRLILVGTCLAAVLSASATMAAEP--------TYVVGSGGTYRPFEYENSQKQLEGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ A D +++ + + F L S DI+ T R+ + F Sbjct: 53 IDIIKAIAKA---DGFQVKLVNTPWEGIFATLGSGDRDIIISGITITDKRKQM--VDFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q ++ K + S++ L ++ V +T ++ ++D + F+ Sbjct: 108 PYFPAEQTIVVAKGSKVDSIAALKNLNVGVVNSSTGDIVVSDVLGKN--STAIKRFDNTP 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A GD+ T+ + ++ + A+ +G+ E N Sbjct: 166 LMLQELYEDGIAAAVGDVGVAKFYLKTHPEKAFELVSDTKFERQYFGIAVAKGNDELRNK 225 Query: 241 VSWTHY 246 ++ Sbjct: 226 INNGLQ 231 >gi|256157682|ref|ZP_05455600.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella ceti M490/95/1] gi|265996187|ref|ZP_06108744.1| extracellular solute-binding protein [Brucella ceti M490/95/1] gi|262550484|gb|EEZ06645.1| extracellular solute-binding protein [Brucella ceti M490/95/1] Length = 242 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 82/248 (33%), Gaps = 18/248 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + +I + + ++ ++ F V ++G +G D Sbjct: 1 MLKAIVFAGIASVIAVLPAQA---------REWKEIRIATEGAYPPFNFVASDGSLQGLD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL A+ +K + + L+S + D + + T R+ + F Sbjct: 52 VDIAKALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 106 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + K I+S G ++ Q TT D + ++ Sbjct: 107 KYYSTPLSVAVPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E +A ++ R D D + + +I +++ A A+ GD + Sbjct: 165 ADEANADLKSGRLDTVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTAVALRLGDDDLR 224 Query: 239 NIVSWTHY 246 + Sbjct: 225 EQFNAAIK 232 >gi|126458803|ref|YP_001055081.1| extracellular solute-binding protein [Pyrobaculum calidifontis JCM 11548] gi|126248524|gb|ABO07615.1| extracellular solute-binding protein, family 3 [Pyrobaculum calidifontis JCM 11548] Length = 299 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 86/238 (36%), Gaps = 9/238 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + S + IKKRG L G + + V+ N + G+D+D R ++ A+ ++ Sbjct: 57 AASQCPVSVDVIKKRGKLILGTDATWPPWEWVRGN-EIVGWDIDIAREIAKALG---VQL 112 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-HKKKGI 137 + + A+++ +D+ WT RE L F Y + + K+ I Sbjct: 113 EVRDMRFAGLLEAVRNGDVDLALSAITWTSEREKV--LEFSMPYYLESVVVVTLAKRTDI 170 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + V L G ++ VQ GTT E A+ + + + R DA D Sbjct: 171 NRVEDLYGKTVGVQIGTTHEEWAAENLEKPGKAAVRRYDKVYPYMVEVLRRGDVDAIILD 230 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 S AL +P ++ A+ + + +V ++ L Sbjct: 231 RSIATALVRKFPDLKISFEIPGTAG--YISVAMPKCAQDLKLVVDQVIENLMQTGRLD 286 >gi|323492516|ref|ZP_08097664.1| hypothetical protein VIBR0546_15806 [Vibrio brasiliensis LMG 20546] gi|323313303|gb|EGA66419.1| hypothetical protein VIBR0546_15806 [Vibrio brasiliensis LMG 20546] Length = 256 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 45/224 (20%), Positives = 77/224 (34%), Gaps = 14/224 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 + K+ ++ GI F+ +A+G KGFDVD AL + K + + + Sbjct: 18 VAQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCQEM---EVKCKIVAQDWD 74 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 +L +++ D + T R+ + F FI K G+ L G Sbjct: 75 GIIPSLLARKYDAIIAAMSITEERKK--KVDFTGKYALIPNKFIAKKGAGL-DFDNLDGQ 131 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 I VQ TT + L D + K + + +E R A GD SAL L Sbjct: 132 KIAVQRATTHDKYLTDNY---GDKVEIVRYGSFDEAYLDLANGRVAAVLGDASALEEGVL 188 Query: 207 TNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 + + ++ A+ + D + + Sbjct: 189 NKAGGEAYEFVGPSLTDPKWFGDGFGIALRKQDKDLTKKLDAAI 232 >gi|291482760|dbj|BAI83835.1| hypothetical protein BSNT_00642 [Bacillus subtilis subsp. natto BEST195] Length = 268 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 77/263 (29%), Gaps = 26/263 (9%) Query: 1 MYKDFFVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFAE 49 M K + + I + + + IKK+G L G F Sbjct: 1 MKKALLALFMVVSIAALAACGAGNDNQSKDNAKDGDLWASIKKKGVLTVGTEGTYEPFTY 60 Query: 50 VKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + G+DV+ ++ + K+ + F L SK+ D+++ T Sbjct: 61 HDKDTDKLTGYDVEVITEVAKRLG---LKVDFKETQWDSMFAGLNSKRFDVIANQVGKT- 116 Query: 109 LREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 + F + K I S + + G + Q+ T+ LA A Sbjct: 117 --DREDKYDFSDKYTTSRAVVVTKKDNNDIKSEADVKGKTSA-QSLTSNYNKLATNAGAK 173 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 E + + + R D D A+ T+ + + +S Sbjct: 174 -----VEGVEGMAQALQMIQQGRVDMTYNDKLAVLNYLKTSGNKNVKIAFETGDPQSTY- 227 Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250 +G E + V+ M Sbjct: 228 FTFRKGSGEVVDQVNKALKEMKE 250 >gi|28900492|ref|NP_800147.1| arginine ABC transporter periplasmic arginine-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|260365645|ref|ZP_05778166.1| arginine-binding periplasmic protein 1 [Vibrio parahaemolyticus K5030] gi|260877445|ref|ZP_05889800.1| arginine-binding periplasmic protein 1 [Vibrio parahaemolyticus AN-5034] gi|260898926|ref|ZP_05907367.1| arginine-binding periplasmic protein 1 [Vibrio parahaemolyticus Peru-466] gi|260901240|ref|ZP_05909635.1| arginine-binding periplasmic protein 1 [Vibrio parahaemolyticus AQ4037] gi|28808872|dbj|BAC61980.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|308089190|gb|EFO38885.1| arginine-binding periplasmic protein 1 [Vibrio parahaemolyticus Peru-466] gi|308090773|gb|EFO40468.1| arginine-binding periplasmic protein 1 [Vibrio parahaemolyticus AN-5034] gi|308106806|gb|EFO44346.1| arginine-binding periplasmic protein 1 [Vibrio parahaemolyticus AQ4037] gi|308111454|gb|EFO48994.1| arginine-binding periplasmic protein 1 [Vibrio parahaemolyticus K5030] gi|328470442|gb|EGF41353.1| arginine ABC transporter periplasmic arginine-binding protein [Vibrio parahaemolyticus 10329] Length = 247 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 86/257 (33%), Gaps = 21/257 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ LI + + +K + F + N +GFD Sbjct: 1 MKKILLTSLIGLISANVAANAVAQD---------EIKFAMEATYAPFEYMDENNQIQGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + + AL+ K+ D D T R + F Sbjct: 52 VDLANALCKEM---DAKCSFHNQSFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ K ++ + L G + VQ G+T + L + + + + Sbjct: 107 AYYDNSAAFVSIK-DKVADQNALEGKRVGVQNGSTHQSYLIEQMP----GVTSVPYSSYQ 161 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238 + + R D+ GD + + D + + + A+ +G+ E Sbjct: 162 DAFIDMKNGRIDSVFGDTAVVAEWFKKEDNLAYVGERVTNPKYFGNGFGIAVNKGNDELV 221 Query: 239 NIVSWTHYAMVTAEELG 255 N ++ A+ E Sbjct: 222 NKLNTALEAVKANGEYD 238 >gi|126438726|ref|YP_001059743.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 668] gi|126218219|gb|ABN81725.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 668] Length = 264 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 75/218 (34%), Gaps = 13/218 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F +G GFD+D A+ + + K ++ ALQ Sbjct: 30 KEIRFGVEASYAPFEYKTPDGKLAGFDIDIGNAVCAKL---KVKCVWVENAFDGLIPALQ 86 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152 +++ D ++ + T R + F Y I K G + + + L G I V Sbjct: 87 ARKFDAINSDMTITEQRRK--AIDFTDPIYTIPNQLIAKKGSGLLPTTASLKGKRIGVLQ 144 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT E + + ++ + ++ R DA D A L+ + + Sbjct: 145 GTIQEAYAKKRWAPAG--VEVVPYQTQDLAYEDLKSGRLDATFQDSEAGAKGFLSKPQGA 202 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245 D +S + + + + D + + V+ Sbjct: 203 GFAFAGDHVSDAEILGTGVGFGMRKNDAQLKSAVNQAL 240 >gi|50121973|ref|YP_051140.1| histidine-binding periplasmic protein [Pectobacterium atrosepticum SCRI1043] gi|49612499|emb|CAG75949.1| histidine-binding periplasmic protein [Pectobacterium atrosepticum SCRI1043] Length = 259 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 95/279 (34%), Gaps = 29/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V L LI+ S + +I K +K G + F A+G+ GFD Sbjct: 1 MKKLIKVLPLALIL-------AAGSAMAEIPKN--IKIGTDPTYAPFESKNASGELVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + L I + ++ + +L++K+ID + + T R +AF Sbjct: 52 IDLAKELCKRI---QANCTFVESDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFTE 106 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I +++ L G + V +T E ++ + ++ Sbjct: 107 KLYAANARLIAKKGASIEPTLASLGGKRVGVLQASTQEAFANANWQPKG--VEVVAYQNQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I A A R DA D A L D ++ + + + D Sbjct: 165 DLIYADLSAGRIDAAFQDEVAGSEGFLKLDMGKDYAFAGPAVKDDKFFGVGTGMGLRKAD 224 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE + AM + +K + DV Sbjct: 225 TELKAALDKAFDAM-------RKDGTYDTFAKKYFDFDV 256 >gi|121604972|ref|YP_982301.1| extracellular solute-binding protein [Polaromonas naphthalenivorans CJ2] gi|120593941|gb|ABM37380.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 255 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 87/245 (35%), Gaps = 13/245 (5%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K F + L LF + + +A +L DI++ ++ ++TG + V G Sbjct: 1 MKKTSLFLRTALAGAALFAFAGAAHADLLKDIREAKKIRIAVDTGSPPYGFVDDALKPVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 DV+ + L+ + ++ + + R LQ+ + DI+ + T RE + F Sbjct: 61 SDVETAQLLAQDLG---VALEMVQTTSPNRIPFLQTGKADIVVASLSVTPEREKV--VDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 K I L G + G+ + K M + ++ Sbjct: 116 STPYAQILAVVAGPKAVSIKGFDDLQGKRVATTRGSNNDRVATLGAKGAQM----VRYDD 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A + + D + + A+ P + ++ ++ PL + + + E Sbjct: 172 DATLVTAAVSGQADIIATSPAIVNAVL--GKSPQKDLVTKFVMQTVPLGIGMRKNEPELK 229 Query: 239 NIVSW 243 ++ Sbjct: 230 AWLND 234 >gi|161519896|ref|YP_001583323.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia multivorans ATCC 17616] gi|189353926|ref|YP_001949553.1| polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|160343946|gb|ABX17031.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia multivorans ATCC 17616] gi|189337948|dbj|BAG47017.1| polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] Length = 260 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 42/243 (17%), Positives = 85/243 (34%), Gaps = 21/243 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ + + +L ++ S A K ++ G++ F A+G GFD Sbjct: 1 MKK--ILAAVTVALLAVSAGSAYA------KDWTTVRFGVDASYPPFESKDASGKVVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + +K ++ + AL++++ D + + T R+ + F Sbjct: 53 VDLGNEICRRL---NAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPARQEQIA--FSS 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K G+ + L G SI V+ GT E Y+ + ++ Sbjct: 108 KLFNTPTRLVAKKGSGLMPTAESLKGKSIGVEQGTIQETYAKTYWAPKG--VKVVPYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +++ A A R D D L R + + + + D Sbjct: 166 DQVYADLIAGRLDGALQDAVQAEIGFLKTPRGANFDFAGKDLDDPKTLGEGAGIGLRKED 225 Query: 235 TEW 237 T+ Sbjct: 226 TDL 228 >gi|320327366|gb|EFW83380.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330881566|gb|EGH15715.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 273 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 21/257 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I L+ L ++ + + L ++K L + F+ + + GFD Sbjct: 1 MKYRALLGI-GLVTLAASTQALAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ + ++ + S + DI + + R Sbjct: 60 VDVAKAVAQILGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174 + I S LSG + + + ++ E L + P+ Sbjct: 116 YYASPAVIVVNASDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFDD 175 Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 ++ R DA + L K D+ + + + + P + Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGETLYEEPNS 232 Query: 228 PAIIQGDTEWYNIVSWT 244 AI + D EW V Sbjct: 233 VAIEKDDPEWDAKVREV 249 >gi|301024141|ref|ZP_07187851.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 69-1] gi|284922298|emb|CBG35383.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli 042] gi|300396685|gb|EFJ80223.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Escherichia coli MS 69-1] Length = 260 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ ++ +++ + L + ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E + +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L E + + + D Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKEFAFAGSSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257 >gi|227891055|ref|ZP_04008860.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus salivarius ATCC 11741] gi|227867144|gb|EEJ74565.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus salivarius ATCC 11741] Length = 291 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 36/255 (14%), Positives = 79/255 (30%), Gaps = 17/255 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKC-----------GINTGLVGFAEVK 51 K I CL+ + + G G++ V + Sbjct: 8 KKIVKIITCLLAFLIVGATLAGCTNVRKRANGQDNWKKIEKKKKVVIGLDDSFVPMGFRE 67 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G GFDVD R + D + + ++ + L++ ID++ R+ Sbjct: 68 KDGSLVGFDVDLAREVFKRYGID---VDFQTIDWSMKETELRNGTIDLIWNGYTVNPERK 124 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT-TELTLADYFKAHNMK 170 ++ F + Q + KK+ + + G ++ +Q+G++ E ++ N Sbjct: 125 KTVA--FSVPYLRNQQVLVSKKKENVYDAKSMKGKALGLQSGSSGYESYMSQPKLLKNYV 182 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + ++ A+R D P+ + I A + Sbjct: 183 KEAVQYDTFNNAFLDLNANRIQGLLIDSVYADYYVAHEPDPNSYRISDVGFESENFAVGM 242 Query: 231 IQGDTEWYNIVSWTH 245 +GD ++ Sbjct: 243 RKGDKTLQKKINVAL 257 >gi|15802857|ref|NP_288884.1| lysine-, arginine-, ornithine-binding periplasmic protein [Escherichia coli O157:H7 EDL933] gi|15832448|ref|NP_311221.1| lysine-, arginine-, ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. Sakai] gi|168748162|ref|ZP_02773184.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4113] gi|168755065|ref|ZP_02780072.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4401] gi|168761249|ref|ZP_02786256.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4501] gi|168767939|ref|ZP_02792946.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4486] gi|168772961|ref|ZP_02797968.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4196] gi|168780168|ref|ZP_02805175.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4076] gi|168787220|ref|ZP_02812227.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC869] gi|168798483|ref|ZP_02823490.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC508] gi|195935689|ref|ZP_03081071.1| lysine-, arginine-, ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4024] gi|208809204|ref|ZP_03251541.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4206] gi|208813287|ref|ZP_03254616.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4045] gi|208820048|ref|ZP_03260368.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4042] gi|209399107|ref|YP_002271719.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4115] gi|217327395|ref|ZP_03443478.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. TW14588] gi|254794203|ref|YP_003079040.1| lysine/arginine/ornithine ABC transporter periplasmic-binding protein [Escherichia coli O157:H7 str. TW14359] gi|261223235|ref|ZP_05937516.1| lysine/arginine/ornithine transporter subunit, periplasmic-binding component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261259215|ref|ZP_05951748.1| lysine/arginine/ornithine transporter subunit, periplasmic-binding component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK966] gi|291283551|ref|YP_003500369.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Escherichia coli O55:H7 str. CB9615] gi|12516669|gb|AAG57439.1|AE005463_2 lysine-, arginine-, ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EDL933] gi|13362664|dbj|BAB36617.1| lysine-, arginine-, ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. Sakai] gi|187771168|gb|EDU35012.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4196] gi|188017337|gb|EDU55459.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4113] gi|189002105|gb|EDU71091.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4076] gi|189357571|gb|EDU75990.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4401] gi|189362920|gb|EDU81339.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4486] gi|189368356|gb|EDU86772.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4501] gi|189372974|gb|EDU91390.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC869] gi|189378927|gb|EDU97343.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC508] gi|208729005|gb|EDZ78606.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4206] gi|208734564|gb|EDZ83251.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4045] gi|208740171|gb|EDZ87853.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4042] gi|209160507|gb|ACI37940.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. EC4115] gi|209764868|gb|ACI80746.1| lysine-, arginine-, ornithine-binding periplasmic protein [Escherichia coli] gi|209764870|gb|ACI80747.1| lysine-, arginine-, ornithine-binding periplasmic protein [Escherichia coli] gi|209764872|gb|ACI80748.1| lysine-, arginine-, ornithine-binding periplasmic protein [Escherichia coli] gi|209764874|gb|ACI80749.1| lysine-, arginine-, ornithine-binding periplasmic protein [Escherichia coli] gi|209764876|gb|ACI80750.1| lysine-, arginine-, ornithine-binding periplasmic protein [Escherichia coli] gi|217319762|gb|EEC28187.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli O157:H7 str. TW14588] gi|254593603|gb|ACT72964.1| lysine/arginine/ornithine transporter subunit, periplasmic-binding component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|290763424|gb|ADD57385.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Escherichia coli O55:H7 str. CB9615] gi|320192066|gb|EFW66711.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Escherichia coli O157:H7 str. EC1212] gi|320641138|gb|EFX10617.1| ABC transporter lysine/arginine/ornithine binding periplasmic protein [Escherichia coli O157:H7 str. G5101] gi|320646526|gb|EFX15445.1| ABC transporter lysine/arginine/ornithine binding periplasmic protein [Escherichia coli O157:H- str. 493-89] gi|320651623|gb|EFX20003.1| ABC transporter lysine/arginine/ornithine binding periplasmic protein [Escherichia coli O157:H- str. H 2687] gi|320663077|gb|EFX30394.1| ABC transporter lysine/arginine/ornithine binding periplasmic protein [Escherichia coli O55:H7 str. USDA 5905] gi|320667895|gb|EFX34803.1| ABC transporter lysine/arginine/ornithine binding periplasmic protein [Escherichia coli O157:H7 str. LSU-61] gi|326339663|gb|EGD63474.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Escherichia coli O157:H7 str. 1125] gi|326344125|gb|EGD67886.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Escherichia coli O157:H7 str. 1044] Length = 260 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ ++ +++ + L + ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSILALSL---LVGISAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E + +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L + + + + D Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257 >gi|83720746|ref|YP_442315.1| amino acid ABC transporter periplasmic amino acid-binding protein [Burkholderia thailandensis E264] gi|167581209|ref|ZP_02374083.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis TXDOH] gi|167619295|ref|ZP_02387926.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis Bt4] gi|257138512|ref|ZP_05586774.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis E264] gi|83654571|gb|ABC38634.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis E264] Length = 264 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 75/219 (34%), Gaps = 13/219 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F +G GFD+D A+ + + K ++ ALQ Sbjct: 30 KEIRFGVEASYAPFEYKTPDGKLAGFDIDIGNAVCAKL---KVKCVWVENAFDGLIPALQ 86 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152 +++ D ++ + T R + F Y I K G + + + L G + V Sbjct: 87 ARKFDAINSDMTITEQRRK--AIDFTDPIYTIPNQLIAKKGSGLLPTTASLKGKRVGVLQ 144 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT E + + ++ + ++ R DA D A L+ + + Sbjct: 145 GTIQEAYAKKRWAPAG--VEVVPYQTQDLAYEDLKSGRLDATFQDSEAGAKGFLSKPQGA 202 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246 D +S + + + + D + + V+ Sbjct: 203 GFAFAGDHVSDAEILGTGVGFGLRKNDAQLKSAVNQALK 241 >gi|291459897|ref|ZP_06599287.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291417238|gb|EFE90957.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 271 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 91/274 (33%), Gaps = 32/274 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS--------------ILGDIKKRG-----FLKCGIN 41 M K ++ + L + +++A+ G+ K G L N Sbjct: 1 MKKILAAAMAVVTALSLGACASSAAKSGGTESAKDTSSESAGEAKAEGSYAGKTLIMATN 60 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 + + D G DV+ +A++ + +K + + A+ S + D + Sbjct: 61 AEFPPYEYHEGK-DIVGIDVEIAKAVAEQMG---AKFEVSDMAFDAIISAVDSGKADFGA 116 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 T R+ + F Q I+ + I S+ L G I VQ GTT ++ Sbjct: 117 AGMTVTEDRKK--NVDFSDTYATSVQSVIVPENSDIKSIDDLKGKKIGVQQGTTGDIYAT 174 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 + F + + A A + DA D K +L Sbjct: 175 KDYGK----DAIQPFPKGVDAVLALGAGKVDAVIID---GNTAKAFVADQKGLKLLDSAY 227 Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 ++ A + +G+TE + ++ + + +L Sbjct: 228 AEEEYAICVKKGNTELRDGINAALKELKASGKLD 261 >gi|325496650|gb|EGC94509.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia fergusonii ECD227] Length = 260 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ ++ +++ + L + ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSILALSL---LVGISAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E + +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L + + + + D Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGPSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257 >gi|238019865|ref|ZP_04600291.1| hypothetical protein VEIDISOL_01741 [Veillonella dispar ATCC 17748] gi|237863389|gb|EEP64679.1| hypothetical protein VEIDISOL_01741 [Veillonella dispar ATCC 17748] Length = 266 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 79/251 (31%), Gaps = 14/251 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +K L + ++ G L+ G T F + + + GFDV Sbjct: 10 FKKLTAIALVAVAAMGLLAGCGNDKPKMTQQEGVLRVGSETTFPPFEFTEGD-KYVGFDV 68 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + K+++ + A+QS ID+++ + T RE L F + Sbjct: 69 DLSEAIAKKLG---LKMEFKSMGFDALIPAVQSGDIDMIAAGINATPEREK--ALDFSDV 123 Query: 122 TYFD--GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + I ++ +L+G ++ Q GT + Sbjct: 124 YFDQGGFITVVRKDNTTIHNMDELAGHTVGAQIGTIPVEMAQKI-----PNTTVKQIDSN 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 I +A D D A+ L + ++ + + +G+ Sbjct: 179 ANIFMELKAGTIDGAIIDN-AVAMYYLKQGADQDLKLVGEPTKAEGTVLGVKKGNKALQE 237 Query: 240 IVSWTHYAMVT 250 V+ + Sbjct: 238 AVNKALKELKE 248 >gi|311106035|ref|YP_003978888.1| extracellular solute-binding protein, family 3 family protein 4 [Achromobacter xylosoxidans A8] gi|310760724|gb|ADP16173.1| bacterial extracellular solute-binding protein, family 3 family protein 4 [Achromobacter xylosoxidans A8] Length = 247 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 78/212 (36%), Gaps = 13/212 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ + V +G GFD++ AL+ A+ ++++ ++ K ALQ+ Sbjct: 28 TIRAVTDATFPPMEFV-KDGKRTGFDIELVEALAGAMGKK---VEWIDIDFKGLIPALQA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 + DI T R + F Y G + K + ++ L G + VQ GT Sbjct: 84 GRADIAVSAIYITPERAKV--VDFTDPYYAGGLVVMTKKDGPVKTLKDLDGRKVSVQVGT 141 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + L +++ A + E+ +E+ + R +A A + + Sbjct: 142 KSVNYLKEHYPA----VQRVEVEKNQEMFNLVQIGRAEAAVTGKPAAKLFAQSTP---DL 194 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 +L D I+ A+ + E ++ Sbjct: 195 TVLNDQITTEDYGIAVPKNKPELTRELNAALQ 226 >gi|70733436|ref|YP_263211.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] gi|68347735|gb|AAY95341.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] Length = 273 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 79/253 (31%), Gaps = 24/253 (9%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGFDVDFCR 65 + L L +L +S + + L I+++ L G+ F+ + GFDVD + Sbjct: 6 LLALGLTVLAASSQAFAGATLERIEQKKEL-VGVLMESYPPFSFLNEQNQLDGFDVDVAK 64 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++ + +++ + S + DI + + R F Y Sbjct: 65 AVADKLG---VRLRLETPSWDVIAAGRWSGRYDICICSMTPSKARAEV--FDFPVQYYAS 119 Query: 126 GQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN----------MKYHPI 174 + K + I LS + + A ++ E L Sbjct: 120 PAVIVVNAKDERIHGAQDLSDKKVGLTAASSYEGYLNKNLVIEGAEDTHLQYPFENVQIA 179 Query: 175 VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R DA + L + + S + + + P + AI Sbjct: 180 PYDTDNVAFQDLGLGPGVRLDAILTN---LVTAQPRLTQDSRFKLAGEPLYAEPNSVAIE 236 Query: 232 QGDTEWYNIVSWT 244 +GD +W V Sbjct: 237 KGDAQWNAKVREV 249 >gi|240950026|ref|ZP_04754334.1| amino acid ABC transporter, substrate-binding protein [Actinobacillus minor NM305] gi|240295504|gb|EER46247.1| amino acid ABC transporter, substrate-binding protein [Actinobacillus minor NM305] Length = 260 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 84/247 (34%), Gaps = 13/247 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K V L + L ++ S S+L I +G + G F +G G+ Sbjct: 1 MLKKLSVIALTTLALATSATSFAKESLLERINNKGTITVGTEGTYAPFTYHDESGKLTGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ RA++ + +++ N L++ + D+++ T E Sbjct: 61 DVEVTRAIADKLGVK---VEFKETNWDSMLAGLKADRFDLVANQVALT-SPERQATFDKT 116 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G K I V + G Q+ T+ LA ++A + + Sbjct: 117 EPYNWSGAVLAAPKDETRIKKVEDVKGLK-AAQSLTSNYGELARKYEA-----VIVPVDG 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + R D +T + S L + S+ I + K +G+ E Sbjct: 171 LAQSVKVIETKRAD-FTFNDSLAVLDYLKKNPKSDLKIFWESSDKVGAGLVANKGNQEAL 229 Query: 239 NIVSWTH 245 + +S Sbjct: 230 DKISAVI 236 >gi|17230921|ref|NP_487469.1| glutamine-binding protein of glutamine ABC transporter [Nostoc sp. PCC 7120] gi|17132562|dbj|BAB75128.1| glutamine-binding protein of glutamine ABC transporter [Nostoc sp. PCC 7120] Length = 271 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 42/243 (17%), Positives = 97/243 (39%), Gaps = 12/243 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 +I+ ++ T +A+ + +I++RG++ + L A+G +G ++D Sbjct: 17 ILSAIIICFMISATGLVASAAEMPEIQRRGYITVAVKDNLPLLGFKDADGKLQGLEIDLA 76 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + L++ + ++ P++ ++R + + ++DI T R ++F Y Sbjct: 77 KRLAADLLGKADAVKLQPVSNRDRLSVVFNHKVDIAIARVTATESRSRL--VSFSVPYYM 134 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DG I K + ++ L+ I V ++T + Y + +E A Sbjct: 135 DGTYLIT-KDATVQQINDLAKRKIAVLNNSSTIAEVRYYIPKA----ELVGVNSYQEAQA 189 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIVS 242 A + A+ D S L + ++ +LP +S +PL+ + + E ++ Sbjct: 190 AIENNSVAAFAADGSLLSGWVREHP---QYRLLPTKLSTAPLSVVMPKGLQYDELRREIN 246 Query: 243 WTH 245 Sbjct: 247 EAI 249 >gi|238785180|ref|ZP_04629173.1| Extracellular solute-binding protein family 3 [Yersinia bercovieri ATCC 43970] gi|238713928|gb|EEQ05947.1| Extracellular solute-binding protein family 3 [Yersinia bercovieri ATCC 43970] Length = 265 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 37/253 (14%), Positives = 88/253 (34%), Gaps = 17/253 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L ++ + + I+ + G++ G F + +G+ GFD Sbjct: 4 MKKTL--AALLTGMILSAPMLSATAAAAAIE---TISFGVDGGYPPFDVLSPSGEITGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + +K ++ + AL +++ D + + T R+ + F Sbjct: 59 IDIANALCDNL---HAKCVFVKQPFESMIAALNARKFDAIIASLSITDERKK--EVDFTD 113 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K + V+ L G ++ VQ G+ E ++ + + Sbjct: 114 RYYRSAAQLVARKGSPLLPEVASLKGKTVGVQTGSIHETYAKKHWG--GQGVKIVSYANQ 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDT 235 + + + R +A D + + R + +I + A+ + + Sbjct: 172 DNVYLDLLSGRINASLQDNIQAASSFIDTPRGQKFAFAGPVIQDDTISSDVGIAVGKDNP 231 Query: 236 EWYNIVSWTHYAM 248 + ++ A+ Sbjct: 232 ALRDALNGAIKAI 244 >gi|322420356|ref|YP_004199579.1| family 3 extracellular solute-binding protein [Geobacter sp. M18] gi|320126743|gb|ADW14303.1| extracellular solute-binding protein family 3 [Geobacter sp. M18] Length = 264 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 80/249 (32%), Gaps = 22/249 (8%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M+K +C++ L + S ++ L G+ F +G G Sbjct: 1 MFKGIGWLSLFVCILALPLLAPSP-------VRAEKPLVVGMELAYPPFEMTDTSGKPDG 53 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 V L A+ ++ + AL++ +ID++ + T R + F Sbjct: 54 VSVQLAYELGKALG---RPVKIKNMAFDGLIPALKTGKIDLIISSMTATAERAR--SIDF 108 Query: 119 RPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 G ++ K + + +L G +I V+ GTT A + + +V Sbjct: 109 SDPYLTTGLCLLVRKSLPANDIEELDQPGRTIAVKKGTTGHSYAAAHLR----NASVLVL 164 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ + DA+ D + Y + + A I +G+ + Sbjct: 165 DKEAAAVLEVVQGKADAFIYDQMSTYRHYQR--NKATTRAILKPFQTESWAIGIRKGNDD 222 Query: 237 WYNIVSWTH 245 ++ Sbjct: 223 LKAKINRFL 231 >gi|242279378|ref|YP_002991507.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] gi|242122272|gb|ACS79968.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] Length = 277 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 91/249 (36%), Gaps = 22/249 (8%) Query: 6 FVSILCLIILFFTSFSTNA-------SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 + + ++ L ++ +A S L + KR L+ G +T +A NG++ G Sbjct: 11 ITTAILIMGLSSAVWAGDARQNLSQDSTLEKVLKRETLRVGFST-FKPWAMKGKNGEFIG 69 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F++D + L+S + ++++P AL + + DI+ T R +L + F Sbjct: 70 FEIDVAKRLASDMGVK---VRFIPTKWDGIIPALLTGKFDIIIGGMGITPKR--NLKVNF 124 Query: 119 RPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPI 174 F G + +K G SS++ + A V TT E ++ + Sbjct: 125 SDPYEFSGMSIVANKDVAAGKSSLADFNNAETRVSVRLGTTAEKAAKNFLPKAK----IL 180 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F + L ++ L + P+ A+ +GD Sbjct: 181 KFNDEAASIQELLNGKAACLVASNPLPETLAKKYP-GKLYLPLQADFTSEPIGFAVRKGD 239 Query: 235 TEWYNIVSW 243 ++ N ++ Sbjct: 240 PDFLNYLNN 248 >gi|167584860|ref|ZP_02377248.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia ubonensis Bu] Length = 260 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 84/252 (33%), Gaps = 23/252 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ + + +L ++ S A K ++ G++ F +G GFD Sbjct: 1 MKK--ILAAVTVALLAVSAGSAYA------KDWTTVRFGVDASYPPFESKGPDGKVVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + +K ++ + AL++++ D + + T RE + F Sbjct: 53 VDLGNEICRRL---SAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPAREEQIA--FSA 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K + V + G I V+ GT E Y+ + ++ Sbjct: 108 KLFNTPTRLVAKKGSSLMPDVKSVKGHRIGVEQGTIQETYAKTYWAPAG--ATVVPYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL------APAIIQG 233 +++ A A R D D L R + + P + + Sbjct: 166 DQVYADLIAGRLDGALQDAVQADIGFLKTPRGKDFQFVG-TDLDDPKTLGNGAGIGLRKE 224 Query: 234 DTEWYNIVSWTH 245 DT+ + Sbjct: 225 DTDLKAKIDKAI 236 >gi|51243941|ref|YP_063825.1| substrate-binding periplasmic protein (FliY) [Desulfotalea psychrophila LSv54] gi|50874978|emb|CAG34818.1| similar to substrate-binding periplasmic protein (FliY) [Desulfotalea psychrophila LSv54] Length = 275 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 91/256 (35%), Gaps = 25/256 (9%) Query: 1 MY--KDFFVSILCLIILFFTSFSTN--------ASILGDIKKRGFLKCGINTGLVGFAEV 50 M K F ++ L I+ + + +S++ I+K+ L+ G++ +A Sbjct: 1 MKVQKIAFFTLALLCIMMLGTVQASQIQGDITRSSVISKIQKKRVLRVGMDV-FQPWAMK 59 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G+ GF++D R L+ + +++++P AL + + D+L T R Sbjct: 60 NKKGELVGFEIDVARRLAKDMG---VRVEFVPTPWSGIVPALLTGKFDVLIGGIGITSKR 116 Query: 111 EISLGLAFRPITYFDGQGFIMH----KKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 +L + F + G G + H K I V+ GT+ Y Sbjct: 117 --ALKVNFTIPYDYSGMGIVAHRKLAKGFSSIEDFNRPEIEIAVKLGTSAVTATKKYMPR 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 +F+ + R + A G L + D S+ P+ Sbjct: 175 AK----LRMFDTEIQAYQELRNGKVAAVVGSAPRPVYEALDYQD-ILFNPIADTFSQEPI 229 Query: 227 APAIIQGDTEWYNIVS 242 A A+ +GD + + Sbjct: 230 AFALRKGDPDALAFFN 245 >gi|330964979|gb|EGH65239.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 273 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 78/251 (31%), Gaps = 20/251 (7%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + + L+ L ++ + + L ++K L + F+ + + GFDVD +A Sbjct: 6 LLCIGLVTLAASTQALAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFDVDVAKA 65 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + ++ + S + DI + + R Sbjct: 66 VAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VEYYASPA 121 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI----------VF 176 + I S LSG + + + ++ E L + P+ + Sbjct: 122 VIVVNASDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFDDVQIAPY 181 Query: 177 ERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + R DA + L K D+ + + + + P + AI + Sbjct: 182 DNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGETLYEEPNSVAIEKD 238 Query: 234 DTEWYNIVSWT 244 D EW V Sbjct: 239 DPEWDAKVREV 249 >gi|257428635|ref|ZP_05605033.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus 65-1322] gi|257431272|ref|ZP_05607649.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus 68-397] gi|257433952|ref|ZP_05610310.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus E1410] gi|257436868|ref|ZP_05612912.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus M876] gi|282914654|ref|ZP_06322440.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus M899] gi|282924999|ref|ZP_06332665.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus C101] gi|293503725|ref|ZP_06667572.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus 58-424] gi|293510746|ref|ZP_06669451.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus M809] gi|293537288|ref|ZP_06671968.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus M1015] gi|257275476|gb|EEV06963.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus 65-1322] gi|257278220|gb|EEV08868.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus 68-397] gi|257282045|gb|EEV12182.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus E1410] gi|257284219|gb|EEV14342.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus M876] gi|282313365|gb|EFB43761.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus C101] gi|282321835|gb|EFB52160.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus M899] gi|290920133|gb|EFD97201.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus M1015] gi|291095391|gb|EFE25656.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus 58-424] gi|291466637|gb|EFF09158.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus M809] Length = 485 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 93/283 (32%), Gaps = 25/283 (8%) Query: 3 KDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAE---VK 51 K IL L +L ++ + IK+RG L+ G++ V Sbjct: 2 KCLIRFILVLGLLISSAMVYINPAAYAEQDQKWEKIKERGELRVGLSADYAPMEFEHTVN 61 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++ G D+D + ++ + K++ + ++ AL++ +IDI+ T R+ Sbjct: 62 GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118 Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + F ++ K + + + Q GT E + Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNDYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228 R+ ++ A ++ + + + A N + +V + + +A Sbjct: 173 NASITSLSRLPDVILALKSGKVEGVVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + + + ++ T A+ + N D + Sbjct: 232 -VPKDSPKLLSQINKTIKAVKDKGLIDKYMTNAANAMNDDSGF 273 >gi|326202621|ref|ZP_08192489.1| extracellular solute-binding protein family 3 [Clostridium papyrosolvens DSM 2782] gi|325987205|gb|EGD48033.1| extracellular solute-binding protein family 3 [Clostridium papyrosolvens DSM 2782] Length = 270 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 89/254 (35%), Gaps = 19/254 (7%) Query: 1 MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKAN 53 M K I CL+I+ + + I+K G L G + + V Sbjct: 1 MKKGLLKRIFCLLIVATIGISIAGCGGGETMKRIEKTGKLVVGTSGDYAPYEYHMLVDGK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G D+ ++ + + Q + + +L + ++DI+ + Sbjct: 61 DTIVGIDISIVEEIAKDMG---VQFQIVDADFNGLLSSLNTNKVDIVIAGM--NPDEKRK 115 Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + F I Y QG ++ + +V+ L + Q GTT E + + K N Sbjct: 116 KSVDFSKIYYEAKQGVMVRAEDKDKYKTVADLKDKKVGAQLGTTQEKIVQEQIKGAN--- 172 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + ++ ++ + + DA ++ + + N+ +P A A+ Sbjct: 173 -LVSLGKIPDLVMELKNKKIDALVVELPV-ASGYVKNNNDLALTNVPVKDDTGGSAIAVK 230 Query: 232 QGDTEWYNIVSWTH 245 +G++ + ++ T Sbjct: 231 KGNSNLVDKINKTL 244 >gi|228956817|ref|ZP_04118602.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802858|gb|EEM49691.1| Amino acid ABC transporter, solute binding protein [Bacillus thuringiensis serovar pakistani str. T13001] Length = 264 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + V+ + L F + S + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESSTTSSNSEKEFRYAMSGLYKPFNYKENDGKLVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + + + + LQ+K+ D++ + T R ++F Sbjct: 61 FDVEIGEALAKKMNMKATPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVSF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTAISSPEDLKGKKIGVVKASTFKNLVA------KYTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + D E Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|159027770|emb|CAO89640.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 260 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 44/228 (19%), Positives = 83/228 (36%), Gaps = 12/228 (5%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + ++ L I +RG L + L A + + G+ +G ++D + L+S I S I Sbjct: 16 APSFSADLDTIIRRGKLIVAVKNNLPPLAFLDSQGNLQGLEIDIAKRLASEILGSDSAII 75 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 P++ +ER + ++D+ T R+ + F P Y D GF+ K + Sbjct: 76 LKPVSNQERLQVVIDDRVDLAIARVAITPARQRL--VDFSPFYYLDSSGFVT-KNPQLQR 132 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L+ + I V G+TT + +++ +E DA+ D S Sbjct: 133 LEDLANSRIAVLNGSTTIALV----RSNLPNAILRGVASYQEALNLLETGEIDAFAADNS 188 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIVSWTH 245 L + LP + L + + V+ Sbjct: 189 LLTGWVQQFPN---YRQLPIELGAIALGVVLPKGLQYQSLRERVNQAI 233 >gi|260459414|ref|ZP_05807669.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|259034968|gb|EEW36224.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] Length = 261 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 75/228 (32%), Gaps = 24/228 (10%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + L+ G F + ++G GFD+D +AL + K ++ + A Sbjct: 24 QEKTLRIGTEGAYPPFNNLTSDGKLVGFDIDIAQALCDQM---KVKCTFVAQDWDGIIPA 80 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASIC 149 LQ+ + D + + T R+ + F Y + K + + L+G +I Sbjct: 81 LQAGKFDAIVASMSITPERKE--KVDFSHKYYNTPSALAVPKDSTLKGVTKEDLAGKTIG 138 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V TT + + + E A R DA DI L Sbjct: 139 VATTTTHFNYASKTY----TDSTVKGYPSSPEEQADLANGRLDAIEDDIVVLQQWL---- 190 Query: 210 RPSEHVILPDIISKSPL---------APAIIQGDTEWYNIVSWTHYAM 248 + + SP A+ +G+T+ N ++ A+ Sbjct: 191 DSPDGACCKILGQPSPQPVDIFGPGAGIAVRKGETDLVNKLNEAIDAI 238 >gi|317506458|ref|ZP_07964259.1| extracellular solute-binding protein, family 3 [Segniliparus rugosus ATCC BAA-974] gi|316255219|gb|EFV14488.1| extracellular solute-binding protein, family 3 [Segniliparus rugosus ATCC BAA-974] Length = 508 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 81/252 (32%), Gaps = 17/252 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S + +L D K G L G+ G E + +G +G D+D +++ + I Sbjct: 18 SGAGTRDVLADAKA-GRLIIGVKFDQPGLGERRPDGSMRGLDIDVATYIAAELGVPEDHI 76 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + R L++ ++D + + + R + F + GQ ++ Sbjct: 77 TWREAPSPNRENLLRNGEVDFIVASYSISGAR--LNVVDFAGPYFHAGQSLLVRADDASI 134 Query: 139 SVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + SG +C G+T + + + ++ A + DA T Sbjct: 135 TNVASLNSGKRLCSVTGSTPAQNI----RKNYPGVQLQQYDSYSACVEALHRGKIDALTT 190 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY------AMVT 250 D L + P E ++ S + +G T ++ A Sbjct: 191 DDIILAGYAAQS--PGEFKLVGQPFSDELYGVGLARGQTPAKAQINAALQKMFDSAAWDA 248 Query: 251 AEELGITQKNIN 262 A I+ Sbjct: 249 AVLSAFGSSGID 260 >gi|157371444|ref|YP_001479433.1| extracellular solute-binding protein [Serratia proteamaculans 568] gi|157323208|gb|ABV42305.1| extracellular solute-binding protein family 3 [Serratia proteamaculans 568] Length = 263 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 87/257 (33%), Gaps = 23/257 (8%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K V +L L F + +K GI+ A G GF Sbjct: 1 MKTKSSLVLLLPLAFSFAALGGEFSG--------KVIKLGIDPTFPPLEYKTAQGTLTGF 52 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 VD +AL + + ++ ++ + LQ+K+ D ++ + T RE ++F Sbjct: 53 GVDIAQALCNEM---QARCVWVESSWDGMIPGLQAKKFDAIASSMTITPQREK--QISFS 107 Query: 120 PITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + K + + + L G SI VQ G++ E ++ + I ++ Sbjct: 108 NKVSNAPARLVARKGSDLQPTAASLKGKSIGVQQGSSQEAYANAMWRQAG--VNVIAYQS 165 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQG 233 +E++ R DA + S + + +S S + + Sbjct: 166 QQEVNEDLANGRLDA-SLLASVSASEFFKTPGGKDFAFTGAELSDSKYFGIGDGIGVRKE 224 Query: 234 DTEWYNIVSWTHYAMVT 250 D + + A++ Sbjct: 225 DRALLDAFNAALKAIIA 241 >gi|326692922|ref|ZP_08229927.1| amino acid ABC transporter periplasmic protein [Leuconostoc argentinum KCTC 3773] Length = 288 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 92/252 (36%), Gaps = 19/252 (7%) Query: 4 DFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58 +++ L +++ T+ + + L +++ G + G+ F + G +G Sbjct: 15 IVLAAVIVLGLMWATATAKKNSEHEDTLARVERLGRIVWGVKADTKLFGLMNTKTGTPEG 74 Query: 59 FDVDFCRALS---SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 FDVD +AL+ + P Q++P++A + L++ ID T+ E Sbjct: 75 FDVDIAKALTVQIAKQTGVPMSAQFIPVSASSKMQLLKNTNIDGSVS--TMTITPEREKI 132 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + GQ ++ K GI SV ++ +I V GTT + + Sbjct: 133 IDFTKPYFDAGQSILVKKDSGIHSVKDMNDSKYTIIVVVGTTAATEIKKFAPKAK----V 188 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + A ++ + A + D + LY N E+ I + P A Sbjct: 189 LAVQDYATGMQALKSGQGQAMSTDNAILYGFATENP---EYHIAGGTFTHGPYGIAFDND 245 Query: 234 DTEWYNIVSWTH 245 + Sbjct: 246 QGPMIREANKAL 257 >gi|291534359|emb|CBL07471.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Roseburia intestinalis M50/1] Length = 284 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 34/276 (12%), Positives = 80/276 (28%), Gaps = 37/276 (13%) Query: 1 MYKDFFVSILCLIIL-FFTSFSTNASIL------------------------GDIKKRGF 35 M K +L ++ + +N++ D ++ Sbjct: 1 MKKKVISILLTAVLATGMAACGSNSNTAGNSANNTADNAQNTAETSTESTGSADSAEKPV 60 Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G+ + NG GF+VD A+ + D +Q++ AL + Sbjct: 61 LTVGMEGTYAPYTYHDENGTLTGFEVDMANAIGEKMGYD---VQFVETEWDSITAALDAG 117 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGT 154 D++ T R+ F + I+ I+S ++G + Sbjct: 118 NFDVVMNQVTITDERKE--RFDFSTPYIYSKPVLIVAADNTDINSFEDINGKKAAEGLTS 175 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 +D +++ + ++ + D D K Sbjct: 176 ----NFSDIARSYG--AEIVGQDKFALAMECVLSGEADCAINDELTYAYWKQQKGGEDST 229 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 I+ + + + A + +G+ E ++ ++ Sbjct: 230 KIVAESDNVNSSAIMVKKGNDELIEKLNSAIDELLA 265 >gi|291616873|ref|YP_003519615.1| ArtJ [Pantoea ananatis LMG 20103] gi|291151903|gb|ADD76487.1| ArtJ [Pantoea ananatis LMG 20103] gi|327393299|dbj|BAK10721.1| arginine-binding periplasmic protein 2 precursor ArtJ [Pantoea ananatis AJ13355] Length = 243 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 87/250 (34%), Gaps = 25/250 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L+ L ++ + ++ + F + ++ GFD Sbjct: 1 MKKWMIAA--ALVSLAVSAQAAE-----------KIRFATSATYPPFESLNSDNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S + F Sbjct: 48 IDLAKALCEQM---KAECSFTNTAFDSLIPSLKFRRYDAVIAGMDITAER--SKQVDFTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K +++ L G I V+ GTT + L D + + ++ + Sbjct: 103 PYYANSAIVIAPKG-KFTAIDALKGKRIGVENGTTHQKYLQDKHPE----INVVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++ R D GD + + TN+ + + L A+ +G+ Sbjct: 158 NAILDMKSGRLDGVFGDSAVVNQWLKTNNDLASVGEHVTDPAYFGTGLGIAVRKGNAPLR 217 Query: 239 NIVSWTHYAM 248 + + A+ Sbjct: 218 DKFNQALAAL 227 >gi|269960137|ref|ZP_06174513.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269835108|gb|EEZ89191.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 254 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 91/248 (36%), Gaps = 10/248 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + S A L DI+K G L+ G F+ + G+D Sbjct: 1 MKK---TTLLLASVAMALSGVAQADKLEDIQKSGTLRVGTTGDYKPFSYYDGK-TYSGYD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + + ++ + + KE L + DI + R+++ Sbjct: 57 IDVAKHVAKQLGVE---LEIVRTSWKELLTDLNQDKYDIAMGGITRKMQRQLNAEQTQGY 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +T+ K + +++ +++ AS+ V + A+ K FE Sbjct: 114 MTFGKCFLVAKGKAEQYNTIDKVNQASVRVGVNIGGTN--EAFADANLQKASFTRFENNL 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ A + D + ++T++R E D +K I +G+ N Sbjct: 172 DVPKAVATGKVDVMVTETPEGLFYQVTDER-LEAARCEDPFTKGQFGYLIPKGEQRLLNT 230 Query: 241 VSWTHYAM 248 V++ M Sbjct: 231 VNFIIDEM 238 >gi|242239706|ref|YP_002987887.1| cationic amino acid ABC transporter periplasmic protein [Dickeya dadantii Ech703] gi|242131763|gb|ACS86065.1| cationic amino acid ABC transporter, periplasmic binding protein [Dickeya dadantii Ech703] Length = 244 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 77/253 (30%), Gaps = 31/253 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L L T+ ++ + F + A GFD Sbjct: 1 MKKIVLAALLAGFTLSATAAE-------------TVRFAASATYPPFESLDAGNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL I + + AL+ ++ D + D T R + F Sbjct: 48 IDLANALCKQI---QATCSFTNQAFDSLIPALKFRRYDAVISGMDITPERSKQVA--FTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K S++ L G I ++ GTT + L D + ++ + Sbjct: 103 PYYANSAIVIAQKG-KYHSLANLKGKRIGMENGTTHQKYLQDTHPE----VKTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + R D GD + + E + + ++ A+ + Sbjct: 158 NALIDLKNGRLDGVFGDTAVVNEW---LKTNPELATVGEKVTDEAYFGIGLGIAVRPDNQ 214 Query: 236 EWYNIVSWTHYAM 248 ++ A+ Sbjct: 215 ALLEKLNNALAAI 227 >gi|239907730|ref|YP_002954471.1| amino acid ABC transporter substrate binding protein precursor [Desulfovibrio magneticus RS-1] gi|239797596|dbj|BAH76585.1| amino acid ABC transporter substrate binding protein precursor [Desulfovibrio magneticus RS-1] Length = 246 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 35/252 (13%), Positives = 70/252 (27%), Gaps = 24/252 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ + + T + L + + V A+ G Sbjct: 1 MVKKLVLTLALVAM-------TASPTLAK-----TIVFATDATWPPMEFVNADKKITGLA 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A P + + F L + + D + + T R+ + F Sbjct: 49 VDLMEAAGKEAGFTPE---FKAVAWDGIFAGLAAGKYDAICSSVTITDERK--NTMDFST 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Q ++ KK + L G ++ Q TT + + Y + Sbjct: 104 PYMKVRQALVIPKKSAAKCIEDLKGKTLGAQISTTGHFAVKKTEGVKDKSYDEVGL---- 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP--DIISKSPLAPAIIQGDTEWY 238 R D D L D + + + A+ +G+ E Sbjct: 160 -AFEDLYNGRIDGVVCDDPVAKLYALKKDNYKDALKIACIIPADDELYGVAVQKGNKETL 218 Query: 239 NIVSWTHYAMVT 250 +++ A+ Sbjct: 219 ELINKGLAAVTA 230 >gi|89898980|ref|YP_521451.1| extracellular solute-binding protein [Rhodoferax ferrireducens T118] gi|89343717|gb|ABD67920.1| extracellular solute-binding protein, family 3 [Rhodoferax ferrireducens T118] Length = 265 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 76/252 (30%), Gaps = 14/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M ++ + S + L I + + G+ + + + + Sbjct: 1 MKFKLLSTLAGVFASAVLSLATPAHAADDSLSSILAKKSIALGVASDFPPYGYMGPDFKL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G DV + ++ + + ++ R LQ+K+ID++ RE + Sbjct: 61 TGVDVATAQLIADKLGVKAELVP---VSTPNRIPYLQTKKIDLIVSALGKNPEREKV--I 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Q K I S L+G SI V GT + L F Sbjct: 116 DFTVAYAPFFQAVFGPKALSIKSFDDLAGKSIAVTRGTIQDDVLQKVAP---PTLKIQRF 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E AA+ + + + A P ++ SP + +G+T Sbjct: 173 EDDATTVAAFISQQTQLLATGAAVAAAAVQ--KNPQVQAEYKLLLKDSPNFIGVRKGETA 230 Query: 237 WYNIVSWTHYAM 248 V+ A Sbjct: 231 LMTKVNEILLAA 242 >gi|225868709|ref|YP_002744657.1| extracellular solute-binding protein [Streptococcus equi subsp. zooepidemicus] gi|225701985|emb|CAW99548.1| extracellular solute-binding protein [Streptococcus equi subsp. zooepidemicus] Length = 258 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 31/243 (12%), Positives = 76/243 (31%), Gaps = 14/243 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCR 65 ++ ++ L + S+ I++ G L ++ F V G D++ + Sbjct: 1 MVSVLALAACGQTNKTSLQDRIRENGKLVVAVSPDYAPFEFKALVDGKDTIVGADIELAQ 60 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++ + ++ +N +LQ+ + DI +T R F Y Sbjct: 61 AIADELGVK---LELSAMNFDNVLSSLQTGKADIAISGLSYTKERAKV--YDFSEAYYET 115 Query: 126 GQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 ++ ++ L+G + VQ G+ E + + N + + E Sbjct: 116 ENAILVKASDAKRYANKDSLAGKKVAVQKGSIEEGLVKEQLDKANC----VSLTVMGEAI 171 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 ++ + A + + + A A+ +G + ++ Sbjct: 172 NELKSGQVQAVDLEAPVAAGFLAQHKDLALAPFKLQTGDGDAKAVAMPKGSDDLRQTINK 231 Query: 244 THY 246 Sbjct: 232 VIK 234 >gi|206558854|ref|YP_002229614.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] gi|198034891|emb|CAR50763.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] Length = 260 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 72/256 (28%), Gaps = 18/256 (7%) Query: 1 MYKDFFVSILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M F S+L + +L + + A L IK G + G F G G Sbjct: 1 MK--FLRSLLVVALLQATAATSALAADDLSQIKSAGVFRVGTEGTYAPFTYHDETGKLTG 58 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD A++ + P Q++ L + D + T R+ F Sbjct: 59 FDVDIATAIAQRLGVKP---QFVEGKWDGLIAGLDVNRYDAVVNEVSITDARKA--KYDF 113 Query: 119 RPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 I+ I S L G T+ LA A + + Sbjct: 114 STPYITSHAVLIVRADNTTIRSFDDLKGKKSA-NTLTSNFGKLAAAHGA-----DVVPVQ 167 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTE 236 E + R DA D + + + D + + +G Sbjct: 168 GFNESIDLLTSGRVDATINDSLSYLDFRKHKPDAKLKIAATDQTGAGDASGVLLRKGSPA 227 Query: 237 WYNIVSWTHYAMVTAE 252 + A + A+ Sbjct: 228 LVAAIDKAL-ADIKAD 242 >gi|329297628|ref|ZP_08254964.1| cationic amino acid ABC transporter periplasmic-binding protein [Plautia stali symbiont] Length = 263 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 89/241 (36%), Gaps = 21/241 (8%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L L +L +F A I + ++ I+ F G GFD+D AL + Sbjct: 14 LALAVLTGCAFGAQA----KIDQ---VRFAIDPTYPPFESKTPQGKLVGFDIDLGNALCA 66 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + +K ++ AL++++ D + + T R + F Y Sbjct: 67 QM---QAKCVWVESQFDGMIPALKARKFDAILSDMGITEER--LKQIDFTVPLYDTHTQL 121 Query: 130 IMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 I K G + + L G ++ V+ GT E ++ H + + + ++++ + Sbjct: 122 IARKGSGLLPTAESLKGKTVGVEQGTVQERYALAKWQPHG--VNVVPYGDQAQVESDLIS 179 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSW 243 R D D + L + + + L I + P+ A + +GDTE + Sbjct: 180 GRLDVVFTDAAQAANGFLKHPQGKDF-ELAGPIVQDPIIGPGTAIGLRKGDTELKTALDN 238 Query: 244 T 244 T Sbjct: 239 T 239 >gi|314936089|ref|ZP_07843436.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus hominis subsp. hominis C80] gi|313654708|gb|EFS18453.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus hominis subsp. hominis C80] Length = 484 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 85/254 (33%), Gaps = 18/254 (7%) Query: 1 MYKDFFVSILCLIILF---FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 M+K ++IL + + + + IK+ G L+ G++ F VK Sbjct: 4 MFKTIIIAILISLTFINKEPMAHADQDAKWEKIKESGELRVGLSADYAPFEFEKTVKGKS 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 ++ G D+D + ++ + K++ + + AL++ +ID++ T R+ Sbjct: 64 EYVGIDIDLAKKIAKD---NHLKLKIVNMQFDSLLGALKTGKIDVIISGMTSTPERKK-- 118 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F G ++ K ++ S + Q GT E + Sbjct: 119 EVDFSDSYTKTGNVMLIRKSDKNKFHTLKDFSNKKVAAQKGTEQEKIAQQEIE----NAD 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 R+ + A ++++ + + A + + K A+ + Sbjct: 175 ISSLNRLPDAILAVKSNKVEGLVIEKPVAEAYV-KQNNSLMIANVNFNEEKKDNVIAVPK 233 Query: 233 GDTEWYNIVSWTHY 246 V+ + Sbjct: 234 NSPILLANVNKSIK 247 >gi|228475903|ref|ZP_04060613.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus hominis SK119] gi|228270058|gb|EEK11528.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus hominis SK119] Length = 484 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 85/254 (33%), Gaps = 18/254 (7%) Query: 1 MYKDFFVSILCLIILF---FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 M+K ++IL + + + + IK+ G L+ G++ F VK Sbjct: 4 MFKTIIIAILISLTFINIEPMAHADQDAKWEKIKESGELRVGLSADYAPFEFEKTVKGKS 63 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 ++ G D+D + ++ + K++ + + AL++ +ID++ T R+ Sbjct: 64 EYVGIDIDLAKKIAKD---NHLKLKIVNMQFDSLLGALKTGKIDVIISGMTSTPERKK-- 118 Query: 115 GLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F G ++ K ++ S + Q GT E + Sbjct: 119 EVDFSDSYTKTGNVMLIRKSDKNKFHTLKDFSNKKVAAQKGTEQEKIAQQEIE----NAD 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 R+ + A ++++ + + A + + K A+ + Sbjct: 175 ISSLNRLPDAILAVKSNKVEGLVIEKPVAEAYV-KQNNSLMIANVNFNEEKKDNVIAVPK 233 Query: 233 GDTEWYNIVSWTHY 246 V+ + Sbjct: 234 NSPILLANVNKSIK 247 >gi|210618018|ref|ZP_03291853.1| hypothetical protein CLONEX_04086 [Clostridium nexile DSM 1787] gi|210149011|gb|EEA80020.1| hypothetical protein CLONEX_04086 [Clostridium nexile DSM 1787] Length = 259 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 33/267 (12%), Positives = 93/267 (34%), Gaps = 19/267 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + + + + K + G G + +K N + G D Sbjct: 1 MKKKLLSALLVATCVVSMAACGSNKTEKEAKD-DKIIVGTEAGFAPYEYMKGN-EVVGID 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + + ++ ++ A+ S ++D ++ + + F Sbjct: 59 MDIAKAIADDMGKE---LEIKNMDFDGALAAVASGKVDFVAAGVSI--DEDRLKTMDFSH 113 Query: 121 ITYFDGQGFIMHKKKGISSV-------SQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + +++ + + S L G + VQ G ++ ++ + Sbjct: 114 EYVNSTEVIVVNGESPAVTPAGAELSGSDLDGKVVAVQQGNIADIWVS--NEEKCKPKEV 171 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + + + ++ D D A +L + IL ++ + A A+ +G Sbjct: 172 KRYTKFAQAAEDLKNNKVDCIVMD--QYPAEQLVASNGT-LKILDGVLFEDKYAIAVKKG 228 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKN 260 + E + ++ ++ ++ N Sbjct: 229 NQELLDKINKVIDQLIEDGKIEEFTAN 255 >gi|311695922|gb|ADP98795.1| extracellular solute-binding protein, family 3 [marine bacterium HP15] Length = 250 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 34/247 (13%), Positives = 80/247 (32%), Gaps = 22/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L ++ + + L+ + F NG+ GF+ Sbjct: 1 MKKMIFAASCALALIAGGAQAQERD----------LRIAFDVPYEPFEYKDENGELTGFE 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A+ + + +++ L +++ D++ + T R + F Sbjct: 51 VELAEAMCEEM---NANCEFVIQAWDGMIPGLLARKFDLIMSSMSITPERAE--RVLFSE 105 Query: 121 ITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G+ + ++ +S + G ++ VQ GTT + + + + Sbjct: 106 PYYNTPGGWFGPESFNTDVTDMSAMEGKTVGVQRGTTMDTYVTENM---GGIVTIKRYTT 162 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +++ R D D + + + + + A+ Q DT+ Sbjct: 163 ADDMVLDLEGQRLDVVFVDYP--VGEQTVLTKEGFKEVGEAVKLGEGVGVAMRQRDTDLA 220 Query: 239 NIVSWTH 245 V+ Sbjct: 221 EEVNAAL 227 >gi|253574192|ref|ZP_04851534.1| amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] gi|251846669|gb|EES74675.1| amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] Length = 281 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 36/229 (15%), Positives = 71/229 (31%), Gaps = 13/229 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 ++L +K G L+ G F +G GFDV+ ++ + + + Sbjct: 45 PAEQNLLEAVKASGKLRIGTEGTYAPFTFHDKDGKLTGFDVEIAEEVAKRLGVEAE---F 101 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISS 139 + F L +K+ D + + F I+ + I + Sbjct: 102 IETPWDGIFAGLDAKRFDAVFNEVTI--RDDRKEKYDFSDPYIVSRAVLIVPEDNEDIKT 159 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G + L D + + + E + + R DA D Sbjct: 160 FADLKGKKAG----QSLTSNLTDIARENG--AEIVATEGFNQAIDLLLSKRIDATVNDGL 213 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + LK + ++ ++ S A +G+ E V+ AM Sbjct: 214 SFLDLKKQRPD-VKLKVVDEMPEASESAALFNKGNEELVQAVNEALAAM 261 >gi|238854602|ref|ZP_04644935.1| L-cystine-binding protein TcyA [Lactobacillus jensenii 269-3] gi|260664278|ref|ZP_05865131.1| amino acid ABC transporter substrate-binding protein [Lactobacillus jensenii SJ-7A-US] gi|282933429|ref|ZP_06338808.1| cystine-binding periplasmic protein [Lactobacillus jensenii 208-1] gi|238832787|gb|EEQ25091.1| L-cystine-binding protein TcyA [Lactobacillus jensenii 269-3] gi|260562164|gb|EEX28133.1| amino acid ABC transporter substrate-binding protein [Lactobacillus jensenii SJ-7A-US] gi|281302443|gb|EFA94666.1| cystine-binding periplasmic protein [Lactobacillus jensenii 208-1] Length = 263 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 84/252 (33%), Gaps = 15/252 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + L I + + S S ++ +G L G+ +A NG GF+V Sbjct: 5 KKISLFAGLIAISVGLVACSNQKSSSSEVLHKGTLTVGLEGTYAPYAYR-ENGKLTGFEV 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +A++ I+++P L +K+ DI+ + T R+ AF Sbjct: 64 DLAKAVAKKAGYK---IKFVPTKWDSLIAGLGAKKFDIVINDIAMTPERKK--AYAFSTP 118 Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + IM K I S + G I GT + + + + Sbjct: 119 YIYSKSALIMKKTNNTIKSAKDIKGLKIAAATGTANADNVKKFGGQN------VSSTDFS 172 Query: 181 EIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWY 238 R +R A A Y K + +++ +P + + + +G++ Sbjct: 173 TAMELIRQNRVVAAMNSKEAFLYYQKSQHVTDLKYMEVPSSQIAAQEIGIMMAKGNSSLQ 232 Query: 239 NIVSWTHYAMVT 250 ++ + Sbjct: 233 KKINKALNTLKE 244 >gi|227115306|ref|ZP_03828962.1| glutamine ABC transporter periplasmic protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 248 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 81/247 (32%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M S+ + ++ S L +T V F + + + GFD Sbjct: 1 MKSLLKASLAAMTLMMSVSSYAAE---------KELIVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + K P++ ALQ++ ID+ T R+ + F Sbjct: 51 IDLWDAIAKQL---NLKYTLKPMDFGGIIPALQTRNIDLALAGITITEERKK--AIDFSD 105 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I L+G + V++GT + DY KA+ F + Sbjct: 106 GYYNSGLLVMVKADNNDIKGEQDLAGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + +R DA D + T + + D I A +G E Sbjct: 162 DNAYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSIKAQQYGIAFPKGSNELRE 220 Query: 240 IVSWTHY 246 V+ Sbjct: 221 KVNGALK 227 >gi|296158681|ref|ZP_06841511.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295891249|gb|EFG71037.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 267 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 90/246 (36%), Gaps = 9/246 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M++ F+ +L ++ T+ A L I K G ++ G+N + A GFD Sbjct: 1 MFRAVFL-VLAAVVATMTAQVAEARTLDQIIKSGTIRIGVNPNFPPMSSYNATNQLAGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++S + ++P A +R L S +IDI T E + + F Sbjct: 60 IDVGNKIASTLNIKAE---FVPTEAAQRVPFLVSDRIDISLGAL--TRSAERAQLIDFTV 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + + K + + L+ SI + DY K K ++ E + Sbjct: 115 PLHTESMSVLTTSKIKATKWTDLNSPSITLVDMRGNWSV--DYVKDKLPKAKMLLVESIA 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A R DA +I + L D I + + + +G++ + Sbjct: 173 DTVRAVAQGRGDAIVENIDFFQNFTKNYPN-IKWRTLNDPIFVNYDSIGVSKGNSTLKDY 231 Query: 241 VSWTHY 246 ++ + Sbjct: 232 LNVVLF 237 >gi|261217243|ref|ZP_05931524.1| extracellular solute-binding protein family 3 [Brucella ceti M13/05/1] gi|261320114|ref|ZP_05959311.1| extracellular solute-binding protein family 3 [Brucella ceti M644/93/1] gi|260922332|gb|EEX88900.1| extracellular solute-binding protein family 3 [Brucella ceti M13/05/1] gi|261292804|gb|EEX96300.1| extracellular solute-binding protein family 3 [Brucella ceti M644/93/1] Length = 251 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 79/239 (33%), Gaps = 11/239 (4%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + + + S A + K+ ++ F + +G GFD+D AL Sbjct: 1 MAGLASVVLTVSVQAPV--QAKEWKEIRIASEGAYPPFNYMSPDGKLVGFDLDIANALCE 58 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 A+ +K + + L+S + D + + T R+ + F Y Sbjct: 59 AM---EAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTDKYYSTPLSV 113 Query: 130 IMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + K I+S G ++ Q TT D + ++ +E +A + Sbjct: 114 AVPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPTADEANADLK 171 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + R DA D + + +I +++ A A+ GD + + Sbjct: 172 SGRLDAVVSDKFPISDWIKGDGADCCKLIGDIPGTQTDTAVALRLGDDDLREQFNAAIK 230 >gi|241554156|ref|YP_002979369.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863462|gb|ACS61124.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 278 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 81/238 (34%), Gaps = 13/238 (5%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKI 78 A L +I L+C + FA + GFDVD C A++ + Sbjct: 19 LPAKADQLDNIMSAKTLRCATFADVPPFASPDPKTREMAGFDVDLCGAIAKELGVKAE-- 76 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 P++ + R ++ ++DI N +TL R + F Y + I+ Sbjct: 77 -IKPVSVEARVPEVKLGRVDITVANLAYTLSRAEQIQ--FSDPYYLAKEMLIVPADDAGK 133 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + +G I G+T+E+++ K P+ F+ A + + + Sbjct: 134 KKADYAGQRIASTKGSTSEMSI------KLNKSDPLTFQDTASAYLAVQQGKARGMVANT 187 Query: 199 SALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + ++ + + P+ + + ++ + T+ E+ Sbjct: 188 MTTTKFVNESKSKGKAMRMIEEPMLYQPIGIGMAKDQPALTAKINEILRKLDTSGEIN 245 >gi|163868116|ref|YP_001609320.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella tribocorum CIP 105476] gi|161017767|emb|CAK01325.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella tribocorum CIP 105476] Length = 250 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 82/248 (33%), Gaps = 21/248 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F L + FT + LK F+ + +N +GFD Sbjct: 1 MK--LFARALIISAALFTQLA----------DAKTLKIASEGTYPPFSYIDSNNKLQGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + + + L +K+ D + + T R + F Sbjct: 49 IDISYALCKKMNVE---CTIVTQDFEGMIPGLIAKKYDAIVASLSHTQER--LQKIDFTD 103 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y I+ K GI S G ++ VQ+ TT D++ + +K ++ Sbjct: 104 PYYDTALAVIVTKDSGIKEISTQSFRGRNLGVQSNTTQATYAEDHYASKGIK--IKLYPS 161 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E++ HR D D R ++ +K P+A A+ Q + + Sbjct: 162 TIEVNRDLLNHRLDLIIVDKLQALNWLKNEGRDCCLLLGTLEETKFPVAIALRQNNNDLK 221 Query: 239 NIVSWTHY 246 + Sbjct: 222 TKFNEAIK 229 >gi|294085010|ref|YP_003551770.1| polar amino acid uptake family ABC transporter periplasmic substrate-binding protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664585|gb|ADE39686.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 301 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 89/237 (37%), Gaps = 16/237 (6%) Query: 1 MYKDFFVSILCLIILFF-TSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K + + + F + S + I RG + G+ + ++G Sbjct: 22 MLKKIALGMAAASVAFVPLAVSADGHKCTNDTWNKIMSRGKIVVGVKADYKPWGYRNSDG 81 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G ++D + +++ + + ++ +P+ + R L+ + D+L R + Sbjct: 82 SLVGMEIDMAKDVAAKMGVE---LEMVPVQSSNRMQFLEQGKTDLLIATMSDRQDRREIV 138 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 G+ P Y G + K G++S L G +C + G + + + A I Sbjct: 139 GIV-GPNYYTSGTNVMAPKALGLTSWEDLRGKPVCGKQGAFYNQIVEERYGA-----QVI 192 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 F E A R +C A+ D S++ L++ + + + +P A A+ Sbjct: 193 AFTGNAEAKQALRDKKCIAWVYDDSSI-GSDLSSGQYDDFEMPLQSEDDNPWALAVP 248 >gi|239816390|ref|YP_002945300.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239802967|gb|ACS20034.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 268 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 75/240 (31%), Gaps = 10/240 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + +A + DIKK+G + G+ + A G+D D R L+ Sbjct: 24 TVFAPFASAQSVADIKKKGEITIGMLVDFPPYGTTNAQNQPDGYDADVARLLAKD---WG 80 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K +P+ R L + ++D+L + T R + F K Sbjct: 81 VKANIVPVTGPNRIPFLLTNKVDLLVASLAITPERAKQVQ--FSQPYAAATIVLYGATKA 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I + L G + V +T ++ + F+ A + + DA Sbjct: 139 PIKAAGDLKGLRVGVARASTQDVAVTKAAPE---GTEIRRFDDDASAMQALISGQVDAI- 194 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 S A ++ P+ + + + A+ G E V+ EL Sbjct: 195 -GCSVTVAAQIAKRVPAGTYENKFTLVQQSMGIAMRPGQEELTKAVNEFVAKNTANGELN 253 >gi|257869173|ref|ZP_05648826.1| his/Glu/Gln/Arg/opine ABC transporter permease [Enterococcus gallinarum EG2] gi|257803337|gb|EEV32159.1| his/Glu/Gln/Arg/opine ABC transporter permease [Enterococcus gallinarum EG2] Length = 275 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 78/256 (30%), Gaps = 24/256 (9%) Query: 6 FVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGLVGFAE---VKA 52 F+++ L+ L ++S L IK G L + F + Sbjct: 4 FITVAALLTLAACGNGGSSSTDSSKKGDQNQLEAIKSAGVLNVATSADFAPFEFHALIDG 63 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G D+D ++ + + + L AL + DI T R Sbjct: 64 KDQIVGADIDLVNEIAKELGVK---VNVMDLEFNAVLTALSQGKADIAVSGISATDER-- 118 Query: 113 SLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 F + Q ++ K +S++ SG + Q G+ E + + Sbjct: 119 KQTFDFTDNYFTPEQKIVIKKDNTDALSAIDDFSGKKVGAQKGSIQEAVVQNQLA----D 174 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + +V + + D + + + ND + I + A A+ Sbjct: 175 SQLVSIAKVPNLINELKQGSIDGLVLESAVADSYVAQNDDLAVADIALEASPDDSYAIAL 234 Query: 231 IQGDTEWYNIVSWTHY 246 +G TE + ++ Sbjct: 235 PKGSTELKDELNRILK 250 >gi|209809240|ref|YP_002264778.1| bacterial extracellular solute-binding protein [Aliivibrio salmonicida LFI1238] gi|208010802|emb|CAQ81199.1| bacterial extracellular solute-binding protein [Aliivibrio salmonicida LFI1238] Length = 266 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 85/239 (35%), Gaps = 16/239 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K +S + L +LF +S + + + IK+RG LK G++T V +A G+ GF+ Sbjct: 2 KRILLSFVSLCLLFSSSAFSESMTPNVDKIKERGTLKVGLST-FVPWAMRDTQGNLIGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + L+ D I ++P +L S + D++ T R + F Sbjct: 61 VDVAKRLAKDSGLD---IVFIPTAWDGIIPSLISGKFDVIIGGLTITDERAK--SVLFTT 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGA---SICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G +KK + + I V+ G T + + F + F+ Sbjct: 116 PYSHSGVQVAANKKLTEGFTREQFNSRRVKIAVRRGAVTVAAVRESFPKAK----VLQFD 171 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + A + ++ + +S+ A A+ G+ + Sbjct: 172 DDAQAFQEVLNGNAHAVAASTPKPEFDAIKYSD-VLYLPFKERLSEGNEAFAVRLGEDD 229 >gi|241661636|ref|YP_002979996.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|240863663|gb|ACS61324.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 275 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 34/231 (14%), Positives = 77/231 (33%), Gaps = 10/231 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 +A L +I+K G ++ I F + + +G+D+D ++ + Sbjct: 31 LLPGRPAHADALANIQKAGVIRVAIPNDFPPFGSLGPDLKLQGYDIDMANLVAKELGVKA 90 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 + + + R L + ++D++ + R + F + K Sbjct: 91 ELVP---VTSTNRIPFLTTGKVDVVISSLGKNAERAKV--IDFTQAYAPFPKSVYGPKDV 145 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I + + L+G +I V G+T +L L+ A +E +Y + T Sbjct: 146 SIKAPADLAGKTIGVTRGSTEDLALSAVAPA---SATIKRYEDNNATAQSYLIGQVQLVT 202 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 A+ + L + +P + +G+ + V+ Sbjct: 203 VGNIVANAVNERTK--LRQLDLKFPVEDTPCYVGVAKGEPALLDKVNAVIT 251 >gi|153837562|ref|ZP_01990229.1| arginine-binding periplasmic protein 1 [Vibrio parahaemolyticus AQ3810] gi|149749059|gb|EDM59870.1| arginine-binding periplasmic protein 1 [Vibrio parahaemolyticus AQ3810] Length = 247 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 86/257 (33%), Gaps = 21/257 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K SI+ LI + + +K + F + N +GFD Sbjct: 1 MKKILLTSIIGLISANVAANAVAQD---------EIKFAMEATYAPFEYMDENNQIQGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + + AL+ K+ D D T R + F Sbjct: 52 VDLANALCKEM---DAKCSFHNQSFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ K ++ + L G + VQ G+T + L + + + + Sbjct: 107 AYYDNSAAFVSIK-DKVADQNALEGKRVGVQNGSTHQSYLIEQMP----GVTSVPYSSYQ 161 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238 + + R D+ GD + + D + + + A+ +G+ E Sbjct: 162 DAFIDMKNGRIDSVFGDTAVVAEWFKKEDNLAYVGERVTNPKYFGNGFGIAVNKGNDELV 221 Query: 239 NIVSWTHYAMVTAEELG 255 N ++ A+ E Sbjct: 222 NKLNTALEAVKANGEYD 238 >gi|332180504|gb|AEE16192.1| ABC-type transporter, periplasmic subunit family 3 [Treponema brennaborense DSM 12168] Length = 278 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 83/285 (29%), Gaps = 22/285 (7%) Query: 1 MYKDFFVSILCLIILF---FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANG 54 M K +++ S L IK +G + G + + Sbjct: 1 MLKKTLTVFAAFLLVLPVIALGQKDAGSKLDQIKAKGKIILGTSADYPPYEFHLLKDGKD 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFDV ++ + ++ +N AL S +D + T R+ Sbjct: 61 TIVGFDVAIAEEIAKDLG---VTLEIKDMNFDGLLAALVSGNVDFVISGMTPTEERK--Q 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQ---LSGASICVQAGTTTELTLADYFKA----- 166 + F I Y G ++ S L A + Q G + K Sbjct: 116 NVDFSDIYYQAVHGAVIRAADTGKYGSDPASLKNAMLGAQKGAIQVGIAKEQIKGVTGAA 175 Query: 167 -HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 + + ++ + + +A ++ A N + Sbjct: 176 LDDNHPQIKELGTLPDLIMEVKNGKVEAVVAELPVAKAYVKANPDLILADYTFEDSEGGS 235 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 A A+ +G+ + + ++ T A +TAE+ + D+ Sbjct: 236 -AIAVKKGNQDLVSAINKTI-ARLTAEDKITEFVGTASLLADSQQ 278 >gi|330951074|gb|EGH51334.1| extracellular solute-binding protein [Pseudomonas syringae Cit 7] Length = 273 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 21/257 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I L+ L ++ + + L ++K L + F+ + + GFD Sbjct: 1 MNYRALLGI-GLVTLAASTHAMAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ + ++ + S + DI + + R Sbjct: 60 VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174 + I S LSG + + + ++ E L + P+ Sbjct: 116 YYASPAVIVVNASDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFED 175 Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 ++ R DA + L K D+ + + + + P + Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGEPLYEEPNS 232 Query: 228 PAIIQGDTEWYNIVSWT 244 AI + D EW V Sbjct: 233 VAIEKDDPEWDAKVRQV 249 >gi|157369895|ref|YP_001477884.1| cationic amino acid ABC transporter periplasmic binding protein [Serratia proteamaculans 568] gi|157321659|gb|ABV40756.1| cationic amino acid ABC transporter, periplasmic binding protein [Serratia proteamaculans 568] Length = 244 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 83/250 (33%), Gaps = 24/250 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L + F + + ++ + F + AN GFD Sbjct: 1 MKK-LLLAATVLAGIAFNASAAE-----------TIRFAASATYPPFESLDANNKIVGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + ++ + AL+ K+ D + D T R + F Sbjct: 49 IDLANALCKQM---KAECTFTNQAFDSLIAALKFKKYDAVISGMDITPERSKQVA--FTQ 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K SS++ L G + ++ GTT + + D + + ++ + Sbjct: 104 PYYANSAIVIAEKG-KFSSLADLKGKKVGMENGTTHQKYMQDKHPE----INTVSYDSYQ 158 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + N + P + + L A+ + Sbjct: 159 NAILELKNGRIDGVFGDTAVVNEWLKNNPQLAPVGEHVTDAQYFGTGLGIAVRPDNQALL 218 Query: 239 NIVSWTHYAM 248 ++ A+ Sbjct: 219 AKLNSALDAI 228 >gi|302187473|ref|ZP_07264146.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae 642] Length = 254 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 82/255 (32%), Gaps = 27/255 (10%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 Y+ + + ++F+ +K GI F A+G GFD Sbjct: 4 YRKILLIAAATLAFSGSAFAE------------TMKMGIEGAYPPFNNKDASGQVVGFDY 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + +AL + + + + + AL + + D L + T R S + F Sbjct: 52 EIGQALCAKMKVECEAVT---SDWDGIIPALMANKFDFLISSLSITKER--SEVVDFTNP 106 Query: 122 TYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 Y + FI K I + L+G S+ Q T L D + Sbjct: 107 YYSNKLQFIAPKTSSIDVSSVEKAKESLAGKSVGAQRSTLAATWLEDKLG----IMDAKL 162 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ E + R DA D + + + ++ + A+ + DT Sbjct: 163 YDTQENAFLDLSSGRVDAMLADKYVSFEWLKSEAGQNFEFKGEPVVEDDKIGIAVRKDDT 222 Query: 236 EWYNIVSWTHYAMVT 250 + + ++ ++ Sbjct: 223 QLRDRLNAALKEIIA 237 >gi|167572118|ref|ZP_02364992.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia oklahomensis C6786] Length = 256 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 83/245 (33%), Gaps = 19/245 (7%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++ L + +L ++ A I + G++ F +G GFDVD Sbjct: 1 MAALTVALLAVSAGGAYAKDWSTI------RFGVDASYPPFESKGPDGKVVGFDVDLGNE 54 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + + +K ++ + AL++++ D + + T RE + F + Sbjct: 55 ICKRV---KAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPQREEQIA--FSSKLFNTP 109 Query: 127 QGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + K + + L G ++ V+ GT E Y+ +K P ++ +++ A Sbjct: 110 TRLVTKKGANLMPTADSLKGKTVGVEQGTIQETYAKTYWAPKGVKVQP--YQNQDQVYAD 167 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNI 240 A R DA D L R + + + + DT+ Sbjct: 168 LLAGRLDAALQDAVQADIGFLKTPRGKDFAFAGSDLDDPKTLGEGAGIGLRKEDTDLKAK 227 Query: 241 VSWTH 245 + Sbjct: 228 IDKAI 232 >gi|125718174|ref|YP_001035307.1| arginine/histidine ABC transporter permease [Streptococcus sanguinis SK36] gi|125498091|gb|ABN44757.1| Arginine/histidine ABC transporter, permease component, putative [Streptococcus sanguinis SK36] Length = 722 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 61/210 (29%), Gaps = 16/210 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L L F + A +K +T F ++ +KG D Sbjct: 1 MKKKFLAVLLTLFPFFALGATAQADT---------VKIVSDTAYAPFEFKDSDQTYKGID 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ D I A+Q+ Q D + T RE Sbjct: 52 VDIINKVAEIKGWD---IDMSFPGFDAAVNAVQAGQADAIMAGMTKTSEREKV--FTMSD 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K IS QL G + V+ GT + L + F+ + Sbjct: 107 TYYDTKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKNKDKYGF--TLKTFDTGD 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + A DA D + Sbjct: 165 LMYNSLSAGDVDAVMDDQPVIEYAINQGQN 194 Score = 89.4 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 28/241 (11%), Positives = 70/241 (29%), Gaps = 14/241 (5%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 + ++ F + + G D++ +A++ ++ ++ Sbjct: 270 KDKYIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QGFTVEVTNPGFDAAINSV 326 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152 Q+ Q D + T R+ + + Y + I S +L G ++ V+ Sbjct: 327 QTGQADGIIAGMSVTDARKKT--FDYSDPYYTANSILAVKDSSNIKSYEELKGKTVGVKT 384 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT ++ L + + F + + A D + + Sbjct: 385 GTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVMDDEPVVKYAIKQGKK-- 440 Query: 213 EHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 L I +P A ++ + + +E G Q+ +++ Sbjct: 441 ----LKTPIEGTPSGQVAFAVKKGSNPELIEMFNNGLANLKESGKYQEILDKYLASEEKE 496 Query: 272 D 272 Sbjct: 497 S 497 >gi|66048136|ref|YP_237977.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae B728a] gi|63258843|gb|AAY39939.1| extracellular solute-binding protein, family 3 [Pseudomonas syringae pv. syringae B728a] Length = 254 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 80/255 (31%), Gaps = 27/255 (10%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 YK + + ++F+ +K GI F A+G GFD Sbjct: 4 YKKILLIAAATLAFSGSAFAE------------TMKMGIEGAYPPFNNKDASGQVVGFDY 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + +AL + + + + + AL + + D L + T R+ + F Sbjct: 52 EIGQALCAKMKVECEAVT---SDWDGIIPALMANKFDFLISSLSITEERK--QVVDFTNP 106 Query: 122 TYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 Y + FI K I + L+G S+ Q T L D + Sbjct: 107 YYSNKLQFIAPKTSSIDVSSVEKAKESLAGKSVGAQRSTLAATWLEDKLG----IMDAKL 162 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ E + R DA D + + + ++ + A+ +GD Sbjct: 163 YDTQENAFLDLSSGRVDAMLADKYVSFEWLKSEAGQNFEFKGEPVVEDDKIGIAVRKGDD 222 Query: 236 EWYNIVSWTHYAMVT 250 ++ ++ Sbjct: 223 ALRERLNAALKEIIA 237 >gi|296276990|ref|ZP_06859497.1| amino acid ABC transporter, permease [Staphylococcus aureus subsp. aureus MR1] Length = 485 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 92/283 (32%), Gaps = 25/283 (8%) Query: 3 KDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51 K IL L +L T+ + IK+RG L+ G++ V Sbjct: 2 KCLIRFILVLGLLISSAMVYINPTAHAEQDQTWEKIKERGELRVGLSADYAPMEFEHTVN 61 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++ G D+D + ++ + K++ + ++ AL++ +IDI+ T R+ Sbjct: 62 GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118 Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + F ++ K + + + Q GT E + Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228 R+ ++ A ++ + + + A N + +V + + +A Sbjct: 173 NASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + + + ++ T + + N D + Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273 >gi|292487227|ref|YP_003530099.1| putative ABC transporter periplasmic protein [Erwinia amylovora CFBP1430] gi|292900398|ref|YP_003539767.1| ABC transporter substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291200246|emb|CBJ47374.1| ABC transporter, substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291552646|emb|CBA19691.1| putative ABC transport system, periplasmic component [Erwinia amylovora CFBP1430] Length = 257 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 35/246 (14%), Positives = 73/246 (29%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + ++ +S + + L ++ G LK G F+ +G GFD Sbjct: 1 MKSIATLLLAGMVQFGLSSQALAETELAKVQSAGTLKIGTEGTYPPFSYHDTSGKLIGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R ++ + ++ L +++ D + T R F Sbjct: 61 VEIGREVAKRLNVKAE---FVEAKWDGLIAGLDARRYDAVINQVAITAPR--QQKYDFSV 115 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ + S L G T+ LA ++ A + + Sbjct: 116 PYLSSRAVLIVRNDNSEMKSFDDLKGKKSA-HTLTSNFAQLAGHYGA-----QIVGTDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R DA D + K + I + + + +G+ E Sbjct: 170 NQSVDLVASGRADATINDNLSYLDFKKHRPD-VKVKIAATLPAAEDEGILLRKGNPELKA 228 Query: 240 IVSWTH 245 + Sbjct: 229 AIDKAI 234 >gi|212704552|ref|ZP_03312680.1| hypothetical protein DESPIG_02612 [Desulfovibrio piger ATCC 29098] gi|212671951|gb|EEB32434.1| hypothetical protein DESPIG_02612 [Desulfovibrio piger ATCC 29098] Length = 247 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 82/245 (33%), Gaps = 21/245 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M K F ++L ++ +F+ GI++ FA V G GF Sbjct: 1 MKKLFVCALLFGLLASVPAFAQ-----------KTYVNGIDSNYPPFAYVDEKTGQPAGF 49 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD ++ + K+ + P+ LAL +KQID+++ T R + F Sbjct: 50 DVDAMNWIAKTMG---FKVVHKPVAWDGIVLALANKQIDMIASGMSITEKRRKV--VDFS 104 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + F++ ++ LS + VQ GT+ + K + +E Sbjct: 105 DPYWEVSRVFLVPADSKLTPADILSKPIKLGVQRGTSEAEAIKQEQKEKGYPFELRFYES 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R +A D S + + AI +GD E Sbjct: 165 CPLAVEDLVNGRIEAALMD-SLPAGDAIARGKAV--KKAGVHGEPDQFGVAIRKGDKELR 221 Query: 239 NIVSW 243 ++ Sbjct: 222 ALIDE 226 >gi|238920412|ref|YP_002933927.1| arginine-binding periplasmic protein 2 [Edwardsiella ictaluri 93-146] gi|238869981|gb|ACR69692.1| arginine-binding periplasmic protein 2 [Edwardsiella ictaluri 93-146] Length = 244 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 36/253 (14%), Positives = 85/253 (33%), Gaps = 31/253 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ ++ F++ + ++ + F + A+ + GFD Sbjct: 1 MKK--LLACAIVVACSFSAQAAEN-----------IRFASSATYPPFESLDASNNIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + AL+ K+ D + D T R+ + F Sbjct: 48 IDLAKALCQEM---KANCTFNNQAFDSLITALKFKRYDAVISGMDITPERQRQVA--FTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K S++ + G + ++ GTT + L D P+ ++ + Sbjct: 103 PYYANSAIIIAQKG-KYHSIADMKGLRVGMENGTTHQKYLQDKHPE----IKPVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + R D GD + + + + + ++ A+ + Sbjct: 158 NAILDLKNGRIDGVFGDTAVVNEW---LKNNPQLAAVGEYVTDPQYFGIGLGIAVRPDNQ 214 Query: 236 EWYNIVSWTHYAM 248 + ++ A+ Sbjct: 215 ALLHQLNQALAAI 227 >gi|258405469|ref|YP_003198211.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] gi|257797696|gb|ACV68633.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] Length = 244 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 32/251 (12%), Positives = 78/251 (31%), Gaps = 25/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + + + + + ++ V + + G+ Sbjct: 1 MLKKLLFTVLAICLGAQMAVA------------KEIVFAVDATWPPMEFVNSEKEIVGYS 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +DF A + P + + F L D + + T R+ + F Sbjct: 49 IDFMTAAAEEAGFTP---VFKNVAWDGIFAGLAGGNYDAICSSVSITEERKE--AMDFSE 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q ++ K ++ L G + Q GTT T+ D + P ++ + Sbjct: 104 PYFQVQQALVVPKDVEAKTLEDLEGEPVGAQIGTTGYFTIKD-----DGAPEPKSYDEIG 158 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP---DIISKSPLAPAIIQGDTEW 237 R D + S+ + + + ++ A+ +G+ + Sbjct: 159 LAMQDLLNGRLAGVVCDDPVAANYAKQEEGFSDALKIAAILESDTEEYYGIALKKGNEDL 218 Query: 238 YNIVSWTHYAM 248 +++ A+ Sbjct: 219 LKLINKGIRAV 229 >gi|238753464|ref|ZP_04614827.1| Arginine-binding periplasmic protein 2 [Yersinia ruckeri ATCC 29473] gi|238708417|gb|EEQ00772.1| Arginine-binding periplasmic protein 2 [Yersinia ruckeri ATCC 29473] Length = 243 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 86/250 (34%), Gaps = 25/250 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +IL + L ++ L+ + F + AN + GFD Sbjct: 1 MKKLLLATILTGMALSASAAE-------------TLRFAASATYPPFESMGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + AL+ ++ D + D T R + F Sbjct: 48 MDLAKALCKQM---EANCTFTNQAFDSLIPALKFRRYDAVISGMDITPERSKQVA--FTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I HK +S++ L G I ++ GTT + + + + ++ + Sbjct: 103 PYYANSAIVIAHKG-KFTSLADLKGKRIGMENGTTHQKYMQEKHPE----IQTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + T+ + + L A+ +TE Sbjct: 158 NAILDLKNGRIDGVFGDTAVVNEWLKTHPELASVGEHVTDAQYFGTGLGIAVRPENTELL 217 Query: 239 NIVSWTHYAM 248 N ++ A+ Sbjct: 218 NKLNKALDAV 227 >gi|221308175|ref|ZP_03590022.1| hypothetical protein Bsubs1_02048 [Bacillus subtilis subsp. subtilis str. 168] gi|221312497|ref|ZP_03594302.1| hypothetical protein BsubsN3_02034 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317433|ref|ZP_03598727.1| hypothetical protein BsubsJ_02048 [Bacillus subtilis subsp. subtilis str. JH642] gi|221321695|ref|ZP_03602989.1| hypothetical protein BsubsS_02059 [Bacillus subtilis subsp. subtilis str. SMY] gi|255767112|ref|NP_388243.2| cystine ABC transporter substrate-binding lipoprotein [Bacillus subtilis subsp. subtilis str. 168] gi|239938837|sp|P42199|TCYA_BACSU RecName: Full=L-cystine-binding protein tcyA; Flags: Precursor gi|225184739|emb|CAB12155.2| cystine ABC transporter (substrate-binding lipoprotein) [Bacillus subtilis subsp. subtilis str. 168] Length = 268 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 77/263 (29%), Gaps = 26/263 (9%) Query: 1 MYKDFFVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFAE 49 M K + + I + + + IKK+G L G F Sbjct: 1 MKKALLALFMVVSIAALAACGAGNDNQSKDNAKDGDLWASIKKKGVLTVGTEGTYEPFTY 60 Query: 50 VKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + G+DV+ ++ + K+ + F L SK+ D+++ T Sbjct: 61 HDKDTDKLTGYDVEVITEVAKRLG---LKVDFKETQWDSMFAGLNSKRFDVVANQVGKT- 116 Query: 109 LREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 + F + K I S + + G + Q+ T+ LA A Sbjct: 117 --DREDKYDFSDKYTTSRAVVVTKKDNNDIKSEADVKGKTSA-QSLTSNYNKLATNAGAK 173 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 E + + + R D D A+ T+ + + +S Sbjct: 174 -----VEGVEGMAQALQMIQQGRVDMTYNDKLAVLNYLKTSGNKNVKIAFETGEPQSTY- 227 Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250 +G E + V+ M Sbjct: 228 FTFRKGSGEVVDQVNKALKEMKE 250 >gi|74312827|ref|YP_311246.1| lysine-, arginine-, ornithine-binding periplasmic protein [Shigella sonnei Ss046] gi|73856304|gb|AAZ89011.1| lysine-, arginine-, ornithine-binding periplasmic protein [Shigella sonnei Ss046] gi|323168517|gb|EFZ54197.1| lysine-arginine-ornithine-binding periplasmic protein [Shigella sonnei 53G] Length = 260 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 95/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ ++ +++ + L + ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E + +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L + + + D Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKAFAFAGSSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257 >gi|332111085|gb|EGJ11117.1| extracellular solute-binding protein [Rubrivivax benzoatilyticus JA2] Length = 285 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 70/215 (32%), Gaps = 8/215 (3%) Query: 38 CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 G + F G+ GFD+D +A+++ + ++++ + F +L Sbjct: 52 VGTDAAYAPFESQDEKGEIVGFDIDVLKAIAAKAGFE---VKFINTPWEGIFNSLGQGDR 108 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 DI+ T R+ L F + Q + ++ + L + VQ GTT + Sbjct: 109 DIVISAVTITDERK--QTLDFSDAYFDAAQLIAVRDNSKVTKFADLKKLKVGVQTGTTGD 166 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 + + FE + DA D + N I Sbjct: 167 EAVTKL--QGKTSTNIKRFESTPLALKELESGGVDAVVADNGVVIHHVANNPGAKFKTIS 224 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + A+ +G+T ++ A + A+ Sbjct: 225 DTEFAPEQYGIAVKKGNTAVLEKINQGL-AGIKAD 258 >gi|315173030|gb|EFU17047.1| ABC transporter, permease protein [Enterococcus faecalis TX1346] Length = 722 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 45/236 (19%), Positives = 78/236 (33%), Gaps = 14/236 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ ++++ +F + S + KK G + F + G + G D Sbjct: 1 MKRKHFLLSFFVMMVTLLTFISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ ++ PL A+QSKQID + T R+ F Sbjct: 58 VDLLDAIAKD---QDFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKK--SFDFSD 112 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K I S L G ++ + GT + L Y F+ Sbjct: 113 PYFDSSLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKN--KEKYDYTIKNFDDA 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + A DA D L + ++ D + S A+ +G Sbjct: 171 TGLYKALENGEADAIVDDYPV---LGYAVKNDQKLQLVGDKETGSSYGFAVKKGQN 223 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 76/241 (31%), Gaps = 13/241 (5%) Query: 18 TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ + I K+ ++ F A GD+ G DVD + ++ + Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQGDYVGIDVDLVKR-AAELQG--F 313 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135 +++ + A++S Q D + T R+ F + G + K Sbjct: 314 TVEFKFIGFSSAVQAVESGQADGMVAGMTITDDRKK--AFDFSVPYFDSGIQIAVKKGND 371 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L G + V+ GT + L Y + + + +A DA Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAMM 429 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254 D + + ++P I + A+ + + E + + M E Sbjct: 430 DDYPVI-GYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486 Query: 255 G 255 Sbjct: 487 D 487 >gi|310829836|ref|YP_003962193.1| extracellular solute-binding protein family 3 [Eubacterium limosum KIST612] gi|308741570|gb|ADO39230.1| extracellular solute-binding protein family 3 [Eubacterium limosum KIST612] Length = 271 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 83/219 (37%), Gaps = 14/219 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 G++ + GFDVD + + +P + +N + L L S Sbjct: 43 TFVVGLDDSFPPMGFRDDQNNIVGFDVDLATEAAKRMGMEP---KMQVVNWDTKELELDS 99 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 ID + T RE ++ + + Q ++ K GI+ + L G ++ +Q G+ Sbjct: 100 GNIDAIWNGLSVTPEREEAMLM--TKPYLKNDQVIVVKKDSGITKKADLEGKNVGLQKGS 157 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEE---IDAAYRAHRCDAYTGDISALYALKLTNDRP 211 + D F+A ++ E R DA D S + ++++ Sbjct: 158 SAY----DAFEADDIHTKVAGMNEYPENVSALQDLGIGRIDAVIVD-SVVARYYISSENA 212 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 ++VIL + +S A A+ +G+TE + MV Sbjct: 213 -DYVILDESLSPETYAVAVKKGNTELQGKIQKAIDDMVA 250 >gi|291570910|dbj|BAI93182.1| extracellular solute-binding protein [Arthrospira platensis NIES-39] Length = 282 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 97/268 (36%), Gaps = 23/268 (8%) Query: 1 MYKDFFVSILCLII-LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + +S+L L++ + FT + ++L I + G L+ G+ T V F+ + NGD +G+ Sbjct: 1 MNQKLAISLLSLVLSVGFTGVAGAETVLEQIGRTGVLRAGVRTDAVPFSYLNDNGDIEGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD R + + + P +++ + ++RF +Q +D++ T T RE G+ Sbjct: 61 SVDLIRLIHGRLQEKLNQPIRLEMTTVTLQDRFEQVQKGNLDLVCEATSITAERE--NGV 118 Query: 117 AFRPITYFDGQGFIMHKKKGIS-----------SVSQLSGASICVQAGTTTELTLADYFK 165 F + G ++ + S L +I TTT+ L + Sbjct: 119 DFSTPFFVTGIQMLVKTENRDRLDPTQLSETDISTVSLERVTIGFLESTTTDSELRPVYP 178 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL--PDIISK 223 + E + D L + R ++ L ++ Sbjct: 179 EAQWE----AVPSRAEGIRRLQEGELQGIVSDGILLLGQLWKDGRTRQNFQLVPSQPLTF 234 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 + EW +V+ T + Sbjct: 235 ENYGCILPMNSREWSRVVNSTIASPENT 262 >gi|255100911|ref|ZP_05329888.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile QCD-63q42] Length = 267 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 37/253 (14%), Positives = 85/253 (33%), Gaps = 12/253 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGD---IKKRGFLKCGINTGLVGFAEVKANGDWKG 58 K +I+ ++ S + + + + G + V + GD G Sbjct: 6 KKVGIFTIMLGLLGGVVGCSKPNNEKDKDASKESKKEVVVGFDNTFVPMGFLDEKGDTVG 65 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ-IDILSRNTDWTLLREISLGLA 117 FDVD + + ++++ P++ + L + +D+L T R+ ++ Sbjct: 66 FDVDLAKETFKRLG---MEVKFQPIDWSMKETELNDSKTVDVLWNGYSITDERKKI--VS 120 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA--DYFKAHNMKYHPIV 175 + + Q + I+S + L + Q G+T + F P++ Sbjct: 121 YTEPYLQNKQIIVTLSDSKINSKADLKDKEVGTQQGSTALDAVEKDKDFMNSLKGGAPVL 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ ++ R A GD + + ++ +L D A + + Sbjct: 181 YDTYDKALRDLEIGRTSAVVGDEVLIR-YYMGQKGEDKYKVLKDDFGLEDYVVATSKENP 239 Query: 236 EWYNIVSWTHYAM 248 E ++ T M Sbjct: 240 ELCEKINETLKEM 252 >gi|167837282|ref|ZP_02464165.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia thailandensis MSMB43] Length = 264 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 76/219 (34%), Gaps = 13/219 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F +G GFD+D A+ + + + ++ ALQ Sbjct: 30 KEIRFGVEASYAPFEYKTPDGKLAGFDIDIGNAVCTKL---KVRCVWVENAFDGLIPALQ 86 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152 +++ D ++ + T R + F Y I K G + +V+ L G I V Sbjct: 87 ARKFDAINSDMTITEQRRK--AIDFTDPIYTIPNQLIAKKGSGLLPTVASLKGKRIGVLQ 144 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT E + + ++ + ++ R DA D A L+ + + Sbjct: 145 GTIQEAYAKKRWAPAG--VEVVPYQTQDLAYEDLKSGRLDATFQDSEAGAKGFLSKPQGA 202 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246 D +S + + + + D + + V+ Sbjct: 203 GFAFAGDHVSDAEILGTGVGFGLRKHDAQLKSAVNQALK 241 >gi|257095770|ref|YP_003169411.1| family 3 extracellular solute-binding protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048294|gb|ACV37482.1| extracellular solute-binding protein family 3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 304 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 77/240 (32%), Gaps = 8/240 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSAIFDDPSK 77 + L I+ + G G FA + GF +D CR A+ + + Sbjct: 29 AGSPTLDKIRAAETVYLGYREGSAPFAYLDPEQKAIGFSLDLCRHVTDAIQARLGLPALS 88 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + +P R + L+++ ID+ T R+ S+ + ++ + + Sbjct: 89 VVQVPTTPGSRQIMLEAETIDLDCGPVTNTEQRQRSVAYSVTIFVAGVKA--LVRQDSSV 146 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 ++ L + AGTT E + + + E D D Sbjct: 147 RALKDLKDKVVVTTAGTTAEAYIKSAAVRQGLLINYRFGRDHAESLRLLLRGNADVLVLD 206 Query: 198 ISALYALKLTNDRPS--EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L L ++L D P A + D E+ +V T ++ + E Sbjct: 207 DALLAGLLSNLPPAERGRLIVLADSYGFEPYGLAFRRQDPEFKRLVDDTLVGVMQSGEFA 266 >gi|322647257|gb|EFY43756.1| cystine transporter subunit [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] Length = 193 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 67/202 (33%), Gaps = 18/202 (8%) Query: 1 MYKDFF-------VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53 M V + L+ + +L +K+RG L G+ F+ + Sbjct: 1 MKLALLGRQALMGVMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGED 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+VDF AL+ + P +L +K+ID++ + +R+ Sbjct: 61 GKLTGFEVDFAEALAKHLGVKA---SLKPTKWDGILASLDAKRIDVVINQVTISDVRKK- 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F G ++ K I + + L G + V GT E L + Sbjct: 117 -KYDFSTPYTVSGVQALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHV----QGV 171 Query: 172 HPIVFERVEEIDAAYRAHRCDA 193 ++ R R DA Sbjct: 172 DIRTYDDDPTKYQDLRVGRIDA 193 >gi|148268330|ref|YP_001247273.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus JH9] gi|150394392|ref|YP_001317067.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus JH1] gi|253315189|ref|ZP_04838402.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006646|ref|ZP_05145247.2| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793783|ref|ZP_05642762.1| polar amino acid ABC transporter [Staphylococcus aureus A9781] gi|258413720|ref|ZP_05681993.1| polar amino acid ABC transporter [Staphylococcus aureus A9763] gi|258420773|ref|ZP_05683712.1| polar amino acid ABC transporter [Staphylococcus aureus A9719] gi|258438434|ref|ZP_05689718.1| polar amino acid ABC transporter [Staphylococcus aureus A9299] gi|258443879|ref|ZP_05692218.1| polar amino acid ABC transporter [Staphylococcus aureus A8115] gi|258447334|ref|ZP_05695481.1| polar amino acid ABC transporter [Staphylococcus aureus A6300] gi|258448183|ref|ZP_05696310.1| polar amino acid ABC transporter [Staphylococcus aureus A6224] gi|258453384|ref|ZP_05701367.1| polar amino acid ABC transporter [Staphylococcus aureus A5937] gi|269203495|ref|YP_003282764.1| amino acid ABC transporter, permease [Staphylococcus aureus subsp. aureus ED98] gi|282895157|ref|ZP_06303376.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus A8117] gi|282928597|ref|ZP_06336196.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus A10102] gi|295406165|ref|ZP_06815973.1| polar amino acid ABC transporter [Staphylococcus aureus A8819] gi|297244912|ref|ZP_06928789.1| polar amino acid ABC transporter [Staphylococcus aureus A8796] gi|147741399|gb|ABQ49697.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus JH9] gi|149946844|gb|ABR52780.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus JH1] gi|257787755|gb|EEV26095.1| polar amino acid ABC transporter [Staphylococcus aureus A9781] gi|257839507|gb|EEV63978.1| polar amino acid ABC transporter [Staphylococcus aureus A9763] gi|257843377|gb|EEV67787.1| polar amino acid ABC transporter [Staphylococcus aureus A9719] gi|257848478|gb|EEV72469.1| polar amino acid ABC transporter [Staphylococcus aureus A9299] gi|257851285|gb|EEV75228.1| polar amino acid ABC transporter [Staphylococcus aureus A8115] gi|257853921|gb|EEV76877.1| polar amino acid ABC transporter [Staphylococcus aureus A6300] gi|257858422|gb|EEV81298.1| polar amino acid ABC transporter [Staphylococcus aureus A6224] gi|257864476|gb|EEV87221.1| polar amino acid ABC transporter [Staphylococcus aureus A5937] gi|262075785|gb|ACY11758.1| amino acid ABC transporter, permease [Staphylococcus aureus subsp. aureus ED98] gi|282589806|gb|EFB94891.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus A10102] gi|282762501|gb|EFC02642.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus A8117] gi|283471129|emb|CAQ50340.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus ST398] gi|294969162|gb|EFG45183.1| polar amino acid ABC transporter [Staphylococcus aureus A8819] gi|297177992|gb|EFH37240.1| polar amino acid ABC transporter [Staphylococcus aureus A8796] gi|315130497|gb|EFT86483.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus CGS03] gi|329732960|gb|EGG69304.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus 21193] Length = 485 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 92/283 (32%), Gaps = 25/283 (8%) Query: 3 KDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51 K IL L +L T+ + IK+RG L+ G++ V Sbjct: 2 KCLIRFILVLGLLISSAMVYINPTAHAEQDQTWEKIKERGELRVGLSADYAPMEFEHTVN 61 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++ G D+D + ++ + K++ + ++ AL++ +IDI+ T R+ Sbjct: 62 GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118 Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + F ++ K + + + Q GT E + Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228 R+ ++ A ++ + + + A N + +V + + +A Sbjct: 173 NASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + + + ++ T + + N D + Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273 >gi|315166947|gb|EFU10964.1| ABC transporter, permease protein [Enterococcus faecalis TX1341] Length = 722 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 79/236 (33%), Gaps = 14/236 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ ++++ +F + S + KK G + F + G + G D Sbjct: 1 MKRKHFLLSFFVMMVTLLTFISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ ++ PL A+QSKQID + T R+ F Sbjct: 58 VDLLDAIAKD---QDFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKK--SFDFSD 112 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K I S L G ++ + GT + L Y F+ Sbjct: 113 PYFDSGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKN--KEKYDYTIKNFDDA 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + A DA D L + ++ D + S A+ +G Sbjct: 171 TGLYKALENGEADAIVDDYPV---LGYAVKNGQKLQLVGDKETGSSYGFAVKKGQN 223 Score = 97.5 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 75/241 (31%), Gaps = 13/241 (5%) Query: 18 TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ + I K+ ++ F A D+ G DVD + ++ + Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQSDYVGIDVDLVKR-AAELQG--F 313 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135 +++ + A++S Q D + T R+ F + G + K Sbjct: 314 TVEFKFIGFSSAVQAVESGQADGMVAGMTITDDRKK--AFDFSVPYFDSGIQIAVKKGND 371 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L G + V+ GT + L Y + + + +A DA Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAMM 429 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254 D + + ++P I + A+ + + E + + M E Sbjct: 430 DDYPVI-GYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486 Query: 255 G 255 Sbjct: 487 D 487 >gi|163868117|ref|YP_001609321.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella tribocorum CIP 105476] gi|161017768|emb|CAK01326.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella tribocorum CIP 105476] Length = 250 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 83/248 (33%), Gaps = 21/248 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M I+ + ++ S LK + F+ + +N + +GFD Sbjct: 1 MKLLARALIISATLFTLSANSQ------------TLKIASDASYPPFSYIDSNNELQGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + + + L +K+ D + + T R + F Sbjct: 49 IDISYALCKKMNVE---CTIVTQDFEGMIPGLLAKKYDAIISSLSPTKER--LQKIDFTD 103 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y I+ K I S G ++ VQ+ TT D++ + ++ Sbjct: 104 PYYNTALAVIVTKNSEIREISPQAFRGKNLGVQSNTTQAAYAEDHYAPEG--VNIKLYPT 161 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E++ +HR D D + ++ +K P+A A+ + + + Sbjct: 162 TIEVNRDLLSHRLDIIIFDKLKALNWLENEGKDCCKLLGTLEETKFPVAIALRKNNHDLK 221 Query: 239 NIVSWTHY 246 N + Sbjct: 222 NSFNKAIK 229 >gi|257077632|ref|ZP_05571993.1| amino acid ABC transporter [Enterococcus faecalis JH1] gi|256985662|gb|EEU72964.1| amino acid ABC transporter [Enterococcus faecalis JH1] Length = 569 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 79/236 (33%), Gaps = 14/236 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ ++++ +F + S + KK G + F + G + G D Sbjct: 1 MKRKHFLLSFFVMMVTLLTFISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + + PL A+QSKQID + T R+ F Sbjct: 58 VDLLDAIAKDQGFE---VDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKK--SFDFSD 112 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K I S L G ++ + GT + L Y F+ Sbjct: 113 PYFDSGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKN--KEKYDYTIKNFDDA 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + A DA D L + ++ D + S A+ +G Sbjct: 171 TGLYKALENGEADAIVDDYPV---LGYAVKNGQKLQLVGDKETGSSYGFAVKKGQN 223 Score = 99.8 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 76/241 (31%), Gaps = 13/241 (5%) Query: 18 TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ + I K+ ++ F A GD+ G DVD + ++ + Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQGDYVGIDVDLVKR-AAELQG--F 313 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135 +++ + A++S Q D + T R+ F + G + K Sbjct: 314 TVEFKFIGFSSAVQAVESGQADGMVAGMTITDDRKK--AFDFSVPYFDSGIQIAVKKGND 371 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L G + V+ GT + L Y + + + +A DA Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAMM 429 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254 D + + ++P I + A+ + + E + + M E Sbjct: 430 DDYPVI-GYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486 Query: 255 G 255 Sbjct: 487 D 487 >gi|255261459|ref|ZP_05340801.1| arginine-binding periplasmic protein 1 [Thalassiobium sp. R2A62] gi|255103794|gb|EET46468.1| arginine-binding periplasmic protein 1 [Thalassiobium sp. R2A62] Length = 245 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 79/245 (32%), Gaps = 22/245 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L ++ + T+ + + L+ F V ++G+ GFD Sbjct: 1 MKKTLIGASLAVVAMTTTAQAQD-----------VLRIATEGAYPPFNNVTSDGELVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL A+ + + + + L + + D + + T R + F Sbjct: 50 VDIAKALCVAM---DRECEIVAQDWDGIIPGLVNNKYDAIIASMSITEER--LEAINFTA 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + + + + + L +I Q T D F + +++ Sbjct: 105 PYYSNYLSVLGKEGSDL-TREGLGDVAIGAQRSTVGWQWTEDQF---GSRADVRLYDTNP 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A R +A D A L ++ I + I +GD E N Sbjct: 161 AAVSDLEAGRIEAIVMD-FLPAAEVLNTTSGLGYID-EKIDINDQIGIGIRKGDDELTNA 218 Query: 241 VSWTH 245 + Sbjct: 219 FNAAL 223 >gi|222152850|ref|YP_002562027.1| extracellular solute-binding protein [Streptococcus uberis 0140J] gi|222113663|emb|CAR41586.1| extracellular solute-binding protein [Streptococcus uberis 0140J] Length = 270 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 84/254 (33%), Gaps = 18/254 (7%) Query: 1 MYK--DFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAE---VKAN 53 M K F ++ ++ T+ S N AS+ IK +G L ++ F Sbjct: 1 MKKFKLIFTALSLSSLMLLTACSQNSSASLQTKIKDKGKLVVALSPDYAPFEFKTLKDGK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G D+ + +++ + ++ P++ +LQ+ + D+ +T R Sbjct: 61 DTIVGSDIMLAQEIANKL---DVALELSPMSFDNVLSSLQTGKADLAISGISYTKERAKV 117 Query: 114 LGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F Y ++ + + S+ L+G I VQ GT E KA Sbjct: 118 --YDFSKPYYSTKNAMLIKGESKNDLKSLEDLAGKKIGVQKGTIEESLSKKQLKA----S 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 H + + E ++ + DA + N+ A A+ Sbjct: 172 HIVSLTTMSEAINELKSGQIDAVDLEGPVAEGYLAQNEDLVLAPFKLKTGEGDAKAIAMP 231 Query: 232 QGDTEWYNIVSWTH 245 +G + V+ Sbjct: 232 KGSKDLKKTVNQVI 245 >gi|172064620|ref|YP_001812270.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171998105|gb|ACB69021.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 265 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 83/230 (36%), Gaps = 19/230 (8%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G F+ ++ +G GFD+D AL + + + + + Sbjct: 24 KEWKDIRIGYEGAYPPFSSMQPDGTPVGFDIDIIHALCAQMHAN---CTLVQIGWDGLLP 80 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASI 148 AL + ++D + + T R+ +AF Y + ++ K + + ++L G + Sbjct: 81 ALMADKVDAIVASVAITAERK--QKVAFTDKYYNTPRRLVVAKSSPVKDATPAELKGKRV 138 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 VQ GT + + Y+ + + + E+ RA R DA D +A Y+ LT Sbjct: 139 GVQRGTLADKYASAYWVPNG--VLVVRYPTQGEVYLDLRAGRIDAALQDATAAYSAFLTK 196 Query: 209 DRPSEHVILPDIIS----------KSPLAPAIIQGDTEWYNIVSWTHYAM 248 + + I + + D ++ + Sbjct: 197 PEGANFKFVGTPIVGTTPEQKALLGEGYGIPVRKTDDGLRQQLNQAITGI 246 >gi|54288345|gb|AAV31633.1| putative amino acid-binding protein [uncultured alpha proteobacterium EBAC2C11] Length = 261 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 90/242 (37%), Gaps = 11/242 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L ++ NA L I G +K + F V A+G+ +G+D Sbjct: 1 MKK-ILSFLTALTLMIGPISFANAGDLSKILADGVVKIAVPESFAPFGSVGASGEHEGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + + + +K+R L++ ++D++ R + F Sbjct: 60 VDVAKLIAEDLGVKLELVPVV---SKQRIPFLETDRVDLVVSVMGANPKRAK--SINFSS 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G K +SS LSG ++ V GT +L L + F Sbjct: 115 AYAPFYSGAFASSKIDVSSPGDLSGLTVGVTGGTLEDLELTKVAPS---DAKITRFGDNA 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +AY + + +A +L T+ P+ + II SP + +G+ + Sbjct: 172 ATLSAYTSGQVQVLVTGNTAAASL--TDADPNLDLERKYIIKDSPCFIGVKKGNEDLLRW 229 Query: 241 VS 242 V+ Sbjct: 230 VN 231 >gi|300717492|ref|YP_003742295.1| lysine/arginine/ornithine ABC transporter, periplasmic ligand binding protein [Erwinia billingiae Eb661] gi|299063328|emb|CAX60448.1| lysine/arginine/ornithine ABC transporter, periplasmic ligand binding protein [Erwinia billingiae Eb661] Length = 265 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 87/252 (34%), Gaps = 21/252 (8%) Query: 1 MYKDFFVSIL--CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K S+L I + A I ++ ++ F G G Sbjct: 1 MAKALMSSVLRKAAIASLMAGCAFGAQ--AKI---DRVRFAVDPTYPPFESKTPQGKLVG 55 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D AL + + +K ++ AL++++ D + + T R + F Sbjct: 56 FDIDLGNALCTQM---QAKCVWVESQFDGMIPALKARKFDAILSDMGVTEER--LKQIDF 110 Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y I K G + + L G ++ V+ GT E ++ + + + Sbjct: 111 TEPMYDTKTQLIARKGSGLLPTPESLKGKTVGVEQGTVQERYALAKWQPAG--VNVVPYG 168 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQ 232 ++++ + R DA D + L + + + L I + P+ A + + Sbjct: 169 DQAQVESDLVSGRLDAVFTDAAQAAIGFLKHPQGKDF-ELAGPIVQDPIIGPGTAIGLRK 227 Query: 233 GDTEWYNIVSWT 244 GD E + Sbjct: 228 GDAELKTALDNA 239 >gi|321314030|ref|YP_004206317.1| cystine ABC transporter (substrate-binding lipoprotein) [Bacillus subtilis BSn5] gi|320020304|gb|ADV95290.1| cystine ABC transporter (substrate-binding lipoprotein) [Bacillus subtilis BSn5] Length = 268 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 77/263 (29%), Gaps = 26/263 (9%) Query: 1 MYKDFFVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFAE 49 M K + + I + + + IKK+G L G F Sbjct: 1 MKKALLALFMVVSIAALAACGAGNDNQSKDNAKDGDLWASIKKKGVLTVGTEGTYEPFTY 60 Query: 50 VKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + G+DV+ ++ + K+ + F L SK+ D+++ T Sbjct: 61 HDKDTDKLTGYDVEVITEVAKRLG---LKVDFKETQWDSMFAGLNSKRFDVVANQVGKT- 116 Query: 109 LREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 + F + K I S + + G + Q+ T+ LA A Sbjct: 117 --DREDKYDFSDKYTTSRAVVVTKKDNNDIKSEADVKGKTSA-QSLTSNYNKLATNAGAK 173 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 E + + + R D D A+ T+ + + +S Sbjct: 174 -----VEGVEGMAQALQMIQQGRVDMTYNDKLAVLNYLKTSGNKNVKIAFETGDPQSTY- 227 Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250 +G E + V+ M Sbjct: 228 FTFRKGSGEVVDQVNKALKEMKE 250 >gi|300920063|ref|ZP_07136520.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 115-1] gi|300412882|gb|EFJ96192.1| glutamine ABC transporter periplasmic protein [Escherichia coli MS 115-1] Length = 215 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 78/232 (33%), Gaps = 20/232 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 53 LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +R DA D + T + + D + A + Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKAVGDSLEAQQYGIAFPKA 214 >gi|21283528|ref|NP_646616.1| hypothetical protein MW1799 [Staphylococcus aureus subsp. aureus MW2] gi|49486677|ref|YP_043898.1| putative extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57650648|ref|YP_186741.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus COL] gi|87161641|ref|YP_494491.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195682|ref|YP_500488.1| ABC transporter permease [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221962|ref|YP_001332784.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus str. Newman] gi|161510076|ref|YP_001575735.1| amino acid ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142158|ref|ZP_03566651.1| amino acid ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253732516|ref|ZP_04866681.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|258452651|ref|ZP_05700650.1| amino acid ABC transporter [Staphylococcus aureus A5948] gi|282924191|ref|ZP_06331866.1| extracellular glutamine-binding protein [Staphylococcus aureus A9765] gi|284024905|ref|ZP_06379303.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus 132] gi|294850288|ref|ZP_06791023.1| extracellular glutamine-binding protein [Staphylococcus aureus A9754] gi|297207424|ref|ZP_06923861.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911508|ref|ZP_07128953.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH70] gi|304380538|ref|ZP_07363213.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|21204969|dbj|BAB95664.1| MW1799 [Staphylococcus aureus subsp. aureus MW2] gi|49245120|emb|CAG43586.1| putative extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57284834|gb|AAW36928.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus COL] gi|87127615|gb|ABD22129.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203240|gb|ABD31050.1| ABC transporter, permease protein, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374762|dbj|BAF68022.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus str. Newman] gi|160368885|gb|ABX29856.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253723797|gb|EES92526.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|257859626|gb|EEV82475.1| amino acid ABC transporter [Staphylococcus aureus A5948] gi|269941329|emb|CBI49726.1| putative extracellular glutamine-bindingprotein [Staphylococcus aureus subsp. aureus TW20] gi|282592986|gb|EFB97988.1| extracellular glutamine-binding protein [Staphylococcus aureus A9765] gi|294822904|gb|EFG39338.1| extracellular glutamine-binding protein [Staphylococcus aureus A9754] gi|296887887|gb|EFH26783.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300887140|gb|EFK82340.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH70] gi|302751667|gb|ADL65844.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340867|gb|EFM06792.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315196792|gb|EFU27136.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus CGS01] gi|320141291|gb|EFW33136.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus MRSA131] gi|329314534|gb|AEB88947.1| Polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus T0131] gi|329729517|gb|EGG65919.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus 21189] Length = 485 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 92/283 (32%), Gaps = 25/283 (8%) Query: 3 KDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51 K IL L +L T+ + IK+RG L+ G++ V Sbjct: 2 KCLIRFILVLGLLISSAMVYINPTAHAEQDQTWEKIKERGELRVGLSADYAPMEFEHTVN 61 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++ G D+D + ++ + K++ + ++ AL++ +IDI+ T R+ Sbjct: 62 GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118 Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + F ++ K + + + Q GT E + Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228 R+ ++ A ++ + + + A N + +V + + +A Sbjct: 173 NASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + + + ++ T + + N D + Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273 >gi|291283550|ref|YP_003500368.1| Histidine-binding periplasmic protein precursor [Escherichia coli O55:H7 str. CB9615] gi|209764884|gb|ACI80754.1| histidine transport system histidine-binding periplasmic protein [Escherichia coli] gi|290763423|gb|ADD57384.1| Histidine-binding periplasmic protein precursor [Escherichia coli O55:H7 str. CB9615] gi|320663076|gb|EFX30393.1| histidine ABC transporter substrate-binding protein HisJ [Escherichia coli O55:H7 str. USDA 5905] Length = 260 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 96/261 (36%), Gaps = 22/261 (8%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 +FS+ + I + ++ G + F + G+ GFD+D + L I ++ Sbjct: 13 AFSSATATFAAIPQN--IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQC 67 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ +L++K+ID + + T R +AF Y ++ K I Sbjct: 68 TFVENPLDALIPSLKAKKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQ 125 Query: 139 -SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +V L G + V GTT E +++ + + ++ + I + A R DA D Sbjct: 126 PTVESLKGKRVGVLQGTTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQD 183 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAE 252 A L ++ + L + + D E ++ +A + A+ Sbjct: 184 EVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD 242 Query: 253 ELGITQKNINQVSKDTTNPDV 273 +++K + DV Sbjct: 243 ------GTYEKLAKKYFDFDV 257 >gi|188590550|ref|YP_001922410.1| amino acid ABC transporter [Clostridium botulinum E3 str. Alaska E43] gi|188500831|gb|ACD53967.1| amino acid ABC transporter [Clostridium botulinum E3 str. Alaska E43] Length = 278 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 94/263 (35%), Gaps = 29/263 (11%) Query: 2 YKDFFVSILCLIILFFTSFSTN------------ASILGDIKKRGFLKCGINTGLVGFAE 49 K + + + + + N AS+L IK++G L G + + Sbjct: 7 KKLGLIVAIGAMAISIVGCAGNKNEAGSKDGKETASVLESIKQKGKLVVGTSADYPPYEF 66 Query: 50 ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 V GFD+ ++L+ + + +Q ++ ++LQ+ ++D++ Sbjct: 67 HKEVGGKDQIVGFDISIAKSLAEDLGVE---LQINDMDFDGLLISLQAGKVDMVFAGMTP 123 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYF 164 T R F I Y GFI+ K + I S+ L I VQ G+ E + Sbjct: 124 TDER--KQNAEFSDIYYTAQHGFIVRKGEEGNIKSIDDLKDKKIGVQKGSIQEKLANEKI 181 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISK 223 +V ++ + ++ DA ++ N +V+L D Sbjct: 182 P----DAEKKALGKVTDLVLDLKNNKVDAILVELPVAEFNCEKNSDIALTNVVLEDSEGG 237 Query: 224 SPLAPAIIQGDTEWYNIVSWTHY 246 S A A+ +G + ++ T Sbjct: 238 S--AIAMSKGSDDLKGEINKTIQ 258 >gi|172041410|ref|YP_001801124.1| putative extracellular solute-binding protein [Corynebacterium urealyticum DSM 7109] gi|171852714|emb|CAQ05690.1| putative extracellular solute-binding protein [Corynebacterium urealyticum DSM 7109] Length = 382 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 79/200 (39%), Gaps = 9/200 (4%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSA 70 L L T+ S ++ +I KRG L G+ L + D GF+VD R ++ Sbjct: 76 LGSLAPTAASVQENVP-NISKRGRLIVGVAQSLYRLGYRDSESSDLIGFEVDLAREIARD 134 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 IF DP K+++ + ++ R AL++ +D++ R T R+ L F + + Sbjct: 135 IFGDPDKVEFRYVESRHREEALRTGDVDLVLR--TMTTTRKRQKALEFSIPYLHVQERLL 192 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 K GI SV+ L ++C +AD + + A + + Sbjct: 193 TQKGSGIESVADLKHKTVCASQDF-PPGMVADLL----HPKRILQTRTWTDCLMAMQQGQ 247 Query: 191 CDAYTGDISALYALKLTNDR 210 DA D + L L + Sbjct: 248 VDAIYSDDAVLSGLAAQDPD 267 >gi|78358110|ref|YP_389559.1| extracellular solute-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220515|gb|ABB39864.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 273 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 83/223 (37%), Gaps = 15/223 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S + RG LK G +T V +A G++ GF+VD R L++ + ++Q++P Sbjct: 33 STIARAVDRGVLKVGFST-FVPWAMKDKQGEFIGFEVDVARRLAADLG---LEVQFVPTK 88 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQ 142 AL + + D++ + ++ + F + G + H K G S + Sbjct: 89 WSGIIPALLTGKFDVIIGGMSV--KPDRNISVNFTIPYDYAGMAVMAHKGKAAGFSRLED 146 Query: 143 LSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + V A TT YF A +F+ + R A Sbjct: 147 FDREDVVVVARIGTTAASVAKKYFPAA----QVRLFDDEAQAVQELLNGRAHAMVSSAPL 202 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 L + + + + ++ P+ A+ +GD + N+ + Sbjct: 203 PAFTVLEHPD-TLFMPVEGTFTREPVGFAVRKGDIDTLNVFNN 244 >gi|29375354|ref|NP_814508.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis V583] gi|227554876|ref|ZP_03984923.1| amino acid ABC superfamily ATP binding cassette transporter protein [Enterococcus faecalis HH22] gi|256761528|ref|ZP_05502108.1| amino acid ABC transporter [Enterococcus faecalis T3] gi|257081023|ref|ZP_05575384.1| ABC-type amino acid transport/signal transduction protein system [Enterococcus faecalis E1Sol] gi|257083683|ref|ZP_05578044.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis Fly1] gi|257418368|ref|ZP_05595362.1| ABC amino acid transporter [Enterococcus faecalis T11] gi|29342814|gb|AAO80578.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis V583] gi|227175989|gb|EEI56961.1| amino acid ABC superfamily ATP binding cassette transporter protein [Enterococcus faecalis HH22] gi|256682779|gb|EEU22474.1| amino acid ABC transporter [Enterococcus faecalis T3] gi|256989053|gb|EEU76355.1| ABC-type amino acid transport/signal transduction protein system [Enterococcus faecalis E1Sol] gi|256991713|gb|EEU79015.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis Fly1] gi|257160196|gb|EEU90156.1| ABC amino acid transporter [Enterococcus faecalis T11] gi|315573457|gb|EFU85648.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B] gi|315581418|gb|EFU93609.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A] Length = 722 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 79/236 (33%), Gaps = 14/236 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ ++++ +F + S + KK G + F + G + G D Sbjct: 1 MKRKHFLLSFFVMMVTLLTFISGTSAHAEGKK---YTIGTDLTFAPFEFQDSKGKYIGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ ++ PL A+QSKQID + T R+ F Sbjct: 58 VDLLDAIAKD---QDFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKK--SFDFSD 112 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K I S L G ++ + GT + L Y F+ Sbjct: 113 PYFDSGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKN--KEKYDYTIKNFDDA 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + A DA D L + ++ D + S A+ +G Sbjct: 171 TGLYKALENGEADAIVDDYPV---LGYAVKNGQKLQLVGDKETGSSYGFAVKKGQN 223 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 76/241 (31%), Gaps = 13/241 (5%) Query: 18 TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ + I K+ ++ F A GD+ G DVD + ++ + Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQGDYVGIDVDLVKR-AAELQG--F 313 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135 +++ + A++S Q D + T R+ F + G + K Sbjct: 314 TVEFKFIGFSSAVQAVESGQADGMVAGMTITDDRKK--AFDFSVPYFDSGIQIAVKKGND 371 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L G + V+ GT + L Y + + + +A DA Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAMM 429 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254 D + + ++P I + A+ + + E + + M E Sbjct: 430 DDYPVI-GYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486 Query: 255 G 255 Sbjct: 487 D 487 >gi|71737344|ref|YP_273294.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557897|gb|AAZ37108.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 273 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 21/257 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I L+ L ++ + + L ++K L + F+ + + GFD Sbjct: 1 MNYRALLGI-GLVTLAASTQALAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ + ++ + S + DI + + R Sbjct: 60 VDVAKAVAQKMGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174 + I S LSG + + + ++ E L + P+ Sbjct: 116 YYASPAVIVVNASDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFDD 175 Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 ++ R DA + L K D+ + + + + P + Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGETLYEEPNS 232 Query: 228 PAIIQGDTEWYNIVSWT 244 AI + D EW V Sbjct: 233 VAIEKDDPEWDAKVREV 249 >gi|15614024|ref|NP_242327.1| ABC transporter (substrate-binding protein) [Bacillus halodurans C-125] gi|10174078|dbj|BAB05180.1| ABC transporter (substrate-binding protein) [Bacillus halodurans C-125] Length = 276 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 82/246 (33%), Gaps = 24/246 (9%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNASILGDI-------------KKRGFLKCGINTG 43 M K L + + T + +K+ L G + Sbjct: 1 MKKIKNWMQLGVTSILAVGLLVACGTAEDTPEEATTGADDVEAEAGDEKKSVLVMGTSAD 60 Query: 44 LVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 + V G+ GFDVD ++S + + ++ ++ ALQ+ ++D Sbjct: 61 YPPYESVDVTTGEIVGFDVDIAEYITSELGYE---LKIQDMDFNGIIPALQAGRVDFALS 117 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 T R+ + F + Y + ++ G+SSV L+G ++ VQ + E + Sbjct: 118 GMTPTEERKK--SVDFSDVYYDAQNLVVFKEEDGLSSVEDLAGKTVGVQLASIQEEAAVE 175 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 + + RV E+ A R DA + + N I + + Sbjct: 176 LQEELD-GLTIETRNRVPELVQELLAGRVDALIIEDTVAAGHLEANPGLVRFAIESEGET 234 Query: 223 KSPLAP 228 S +A Sbjct: 235 GSAIAF 240 >gi|218768584|ref|YP_002343096.1| histidine-binding periplasmic protein [Neisseria meningitidis Z2491] gi|121052592|emb|CAM08932.1| histidine-binding periplasmic protein [Neisseria meningitidis Z2491] gi|319410821|emb|CBY91211.1| putative amino acid-binding lipoprotein (HBP) [Neisseria meningitidis WUE 2594] Length = 268 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 79/224 (35%), Gaps = 10/224 (4%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 + N F + + G+ +GFDVD A++ A KI++ F AL Sbjct: 37 KVYRVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALN 93 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQA 152 + D++ T + + F + Q ++ K K ISS L + V Sbjct: 94 NGDADVVMSGVTITD--DRKQSMDFSDPYFEITQVVLVPKGKKISSSEDLKNMNKVGVVT 151 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-RP 211 G T + +++ N FE V I D+ D + + N + Sbjct: 152 GYTGDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKG 209 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + V LPD + A+ +GD +++ + + E Sbjct: 210 MDFVTLPD-FTTEHYGIAVRKGDEATVKMLNDALKKVRESGEYD 252 >gi|305680314|ref|ZP_07403122.1| bacterial extracellular solute-binding protein, family 3 [Corynebacterium matruchotii ATCC 14266] gi|305659845|gb|EFM49344.1| bacterial extracellular solute-binding protein, family 3 [Corynebacterium matruchotii ATCC 14266] Length = 333 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 82/223 (36%), Gaps = 15/223 (6%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +I RG L GI+ + G+ +GF+VD + +++ IF DP+KI++ +++ Sbjct: 81 EIISRGRLIVGIDQSQNLLSFRNTITGELQGFEVDIAKEIAADIFGDPTKIEFRYVDSAN 140 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 +L+S QID+ R T R+ + F ++HK I +S++ G Sbjct: 141 WIDSLESHQIDMAIRTLSIT--RDRQDQVFFSTPYLKGSTKILVHKSSAIKGISEIGGRP 198 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +CV + +T + +V + + ++ A D L + Sbjct: 199 VCVTSQSTGIHYARNLAP----TSDLVVVRSSADCLIVMQQNQASAVITDDVILSGMSAQ 254 Query: 208 NDRPSEHVILPDIISKSPLAPA-----IIQGDTEWYNIVSWTH 245 + I +S A ++ T Sbjct: 255 DP---FTTIEGGSLSNENYGIATAKPGYRHHTDGLIRQINATL 294 >gi|253688085|ref|YP_003017275.1| cationic amino acid ABC transporter, periplasmic binding protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754663|gb|ACT12739.1| cationic amino acid ABC transporter, periplasmic binding protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 243 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 79/252 (31%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L I T+ ++ + F + AN + GFD Sbjct: 1 MKKLVLATLLAGIAFSATAA-------------DTIRFASSATYPPFESLDANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + AL+ ++ D + D T R S + F Sbjct: 48 MDLAKALCKQM---QATCTFTNQAFDSLIPALKFRRYDAVISGMDITPER--SKQVTFTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K S + + G I ++ GTT + + D + ++ + Sbjct: 103 PYYANSAVVIAQKG-KFSDFAAMKGKRIGMENGTTHQKYMHDKHPE----VQTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P + + L A+ D Sbjct: 158 NAVLDLKNGRIDGVFGDTAVVNEWI--KTNPELATVGEHVTDAEYFGTGLGIAVRPDDKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNNALDAI 227 >gi|118470254|ref|YP_890525.1| glutamine-binding periplasmic protein/glutamine transporter permease [Mycobacterium smegmatis str. MC2 155] gi|118171541|gb|ABK72437.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Mycobacterium smegmatis str. MC2 155] Length = 475 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 70/222 (31%), Gaps = 14/222 (6%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIF 72 +L IK G L+ G F+ + G+D+D +A++ I Sbjct: 1 MLLAGCGPAANDSDEPIKAAGVLRVGTEGVYAPFSYHDPATNELTGYDIDVVKAVADKIG 60 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +IQ++ F AL++ + DI++ T R+ + Sbjct: 61 ---VQIQFVETPWDSIFAALEANRFDIIANEVTITDERKA--KYDLSEPYSVGEGVIVTR 115 Query: 133 KKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 I+S+ L G + + T+ +A A E + R Sbjct: 116 ADDNSITSLDDLKG-KVAAENATSNWSEIARQAGAR-----VEAVEGFTQAIKLLNQGRV 169 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 D D A+YA + I ++ KS A + Sbjct: 170 DVVVNDSIAVYAYLAETGD-TSVKIAGEVGEKSEQGFAARKD 210 >gi|312830230|emb|CBX35072.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Staphylococcus aureus subsp. aureus ECT-R 2] Length = 485 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 92/283 (32%), Gaps = 25/283 (8%) Query: 3 KDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51 K IL L +L T+ + IK+RG L+ G++ V Sbjct: 2 KCLIRFILVLGLLISSAMVYINPTAHAEQDQTWEKIKERGELRVGLSADYAPMEFEHTVN 61 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++ G D+D + ++ + K++ + ++ AL++ +IDI+ T R+ Sbjct: 62 GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118 Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + F ++ K + + + Q GT E + Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228 R+ ++ A ++ + + + A N + +V + + +A Sbjct: 173 NASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + + + ++ T + + N D + Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDNGLIDKYMTNAANAMNDDSGF 273 >gi|300693431|ref|YP_003749404.1| substrate-binding periplasmic (pbp) ABC transporter protein [Ralstonia solanacearum PSI07] gi|299075468|emb|CBJ34762.1| putative substrate-binding periplasmic (Pbp) abc transporter protein [Ralstonia solanacearum PSI07] Length = 254 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 76/218 (34%), Gaps = 13/218 (5%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +IK+ G L F + GF+++ +A+ + I++ L+ Sbjct: 26 EEIKQSGKLIVATGGEFPPFNYFAGS-QLTGFEIEVAQAVVKKMG---LAIEWKTLSFDS 81 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 LQ + D++ + T R + F Y G + I + + L+G Sbjct: 82 LLAGLQQNRWDLVISSHGVTEERAK--AVDFASPHYCSGSSIVAR-DPAIRTAADLTGKV 138 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + VQ G+T + K F + + A + R DA+ D AL Sbjct: 139 VAVQTGSTYLENVRKLAKPR----EIKNFPQDRDARTALSSGRADAWVTDR--FVALAAI 192 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 P ++ L + +A A+ +G+T + Sbjct: 193 QSNPETNLKLGSPLFVERIAAAVAKGNTALAASYNKAL 230 >gi|86360204|ref|YP_472093.1| amino acid ABC transporter substrate-binding protein [Rhizobium etli CFN 42] gi|86284306|gb|ABC93366.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 257 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 93/276 (33%), Gaps = 26/276 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGF 59 M ++ + ++ + A ++ G+ N F A+G+W+G+ Sbjct: 1 MK--LLPTLFAGVAFALSAVAAQA----------EVRFGVMNESYPPFFAKNASGEWQGW 48 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D A+ + K + ++ ALQSK+ D++ + T R + F Sbjct: 49 EIDLMNAVCEEM---KEKCSIVEISWDGLIPALQSKKFDVIWSSMSNTAERSKV--IDFT 103 Query: 120 PITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y I K + ++ + G +I +Q T YF ++ Sbjct: 104 DKYYNTPSTLIGPKDQKPGATAEDVKGKTIGIQVSTIQSEYYKKYFAEA---ADEKTYQT 160 Query: 179 VEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 ++E + R D GD AL LK + + K L + G + Sbjct: 161 LDEAFQDLASGRIDYVFGDSLALDAFLKSDGGKDCCAKMGDVADDKEVLGAGVSGGLRKE 220 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 + A + A + ++K + D+ Sbjct: 221 DTELKAKLNAAIAA---VRANGQYDAITKKYFDFDI 253 >gi|313893844|ref|ZP_07827410.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Veillonella sp. oral taxon 158 str. F0412] gi|313441408|gb|EFR59834.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Veillonella sp. oral taxon 158 str. F0412] Length = 261 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 51/322 (15%), Positives = 92/322 (28%), Gaps = 69/322 (21%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 M K + I + + + + + G + F +G G Sbjct: 1 MKFKKIAALLGAFTIASSLFIAGCGNT---VTSQKTWRVGTDATYAPFGFKDKDSGKLAG 57 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D A++ + LN ALQS IDI + + + + F Sbjct: 58 FDIDIINAIAKEEGIEAD---IQNLNFDALLPALQSNTIDIAISDMTI--SEDRAKSVDF 112 Query: 119 RPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G G +++ I+S L G I V G+T + A +++ IV Sbjct: 113 SKPYYIAGNGLVVNIDNTNINSFKDLEGKRIGVSIGSTGAEIASKIKNADVRQFNIIV-- 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + D D + + + +PL A+ +G+ E Sbjct: 171 ---DAFLELQNKGVDVVINDTPVNEYYVNGKGKGIA-KVTGEDYDAAPLGIAVKKGNGEV 226 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 N ++ GL K Sbjct: 227 LNKIND----------------------------------------------GLAK---- 236 Query: 298 RIIRHMGNYGEMFDRNLGNQSE 319 I+ G Y E++ + G + Sbjct: 237 --IKANGKYAEIYKKWFGKEPP 256 >gi|312171328|emb|CBX79587.1| putative ABC transport system, periplasmic component [Erwinia amylovora ATCC BAA-2158] Length = 257 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 35/246 (14%), Positives = 73/246 (29%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + ++ +S + + L ++ G LK G F+ +G GFD Sbjct: 1 MKSIATLLLAGMVQFGLSSQALAETELAKVQSAGTLKIGTEGTYPPFSYHDTSGKLIGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R ++ + ++ L +++ D + T R F Sbjct: 61 VEIGREVAKRLNVKAE---FVEAKWDGLIAGLDARRYDAVINQVAITAPR--QQKYDFSV 115 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ + S L G T+ LA ++ A + + Sbjct: 116 PYLSSRAVLIVRDDNSEMKSFDDLKGKKSA-HTLTSNFAQLAGHYGA-----QIVGTDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R DA D + K + I + + + +G+ E Sbjct: 170 NQSVDLVASGRADATINDNLSYLDFKKHRPD-VKVKIAATLPAAEDEGILLRKGNPELKA 228 Query: 240 IVSWTH 245 + Sbjct: 229 AIDKAI 234 >gi|225386719|ref|ZP_03756483.1| hypothetical protein CLOSTASPAR_00467 [Clostridium asparagiforme DSM 15981] gi|225047197|gb|EEG57443.1| hypothetical protein CLOSTASPAR_00467 [Clostridium asparagiforme DSM 15981] Length = 306 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 105/304 (34%), Gaps = 56/304 (18%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASI--------------------------------- 26 M K+ + + ++ S + Sbjct: 1 MKKNLKMSAAILAAVMVMGSLTACGGSSSDPTTAAAAKDTTAAAADSGSSAAADSGSATG 60 Query: 27 -----LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFD------- 73 + I G LK G+ T + F+ + A G+++G + D ++ IF Sbjct: 61 DVTADVQKIIDAGVLKVGVKTDVPCFSLLNTATGEYEGLEDDLAYNIAGKIFGCTPDEAK 120 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 + +++ + AK R +++ ++D++ T R+ + F + D G ++ K Sbjct: 121 EKKLVEFQGVTAKTRGPLVENGELDMVIATFTITEERKET--YNFSTPYFTDAVGLLVLK 178 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI--VFERVEEIDAAYRAHRC 191 GI+S+ L G I V G+T++ Y + P F+ + AA A Sbjct: 179 DSGINSIEDLDGKVIGVAQGSTSQKGFEAYVAEKGINVKPTFEEFDGYPALAAALSAKNI 238 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 D ++ D + L + + +L D ++ + +T +V + + Sbjct: 239 DVFSVDRAILAGYR-----DDTNKLLDDRYAEQEYGVCTKKENTGLAELVDGVVTDLKDS 293 Query: 252 EELG 255 +L Sbjct: 294 GKLA 297 >gi|113868715|ref|YP_727204.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113527491|emb|CAJ93836.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia eutropha H16] Length = 264 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 87/220 (39%), Gaps = 8/220 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +A L IK+R + ++ + + G D++ R L+ + D ++ +P Sbjct: 23 SADTLDTIKQRKKILVAVDISAPPYGMLDTQARQSGSDIETARLLAKDLGVD---LEIVP 79 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + R L +++ D++ + T R+ + F K + S + Sbjct: 80 VTGPNRVPFLLTRKADVVLASFSVTDARKKV--IDFSEPYGVIPVVVGGPTKAQVKSFAD 137 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 LSG ++ V GTT++ L+ KA + + +E + A + D IS + Sbjct: 138 LSGKTVAVTRGTTSDQELSRGAKAV-AAVNIVRYEDDATTNTAVSTGQQDYLAAAISVIP 196 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 ++ PS + + ++ P A + +GDT + + Sbjct: 197 EVR--RSNPSRDLEIKFVMQTFPYAIGLRKGDTALKDWLD 234 >gi|320657375|gb|EFX25177.1| ABC transporter lysine/arginine/ornithine binding periplasmic protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 260 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ ++ +++ + L + ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSILALSL---LVGISAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E + +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L + + + + D Sbjct: 166 DLVYSELAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257 >gi|297563321|ref|YP_003682295.1| extracellular solute-binding protein family 3 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847769|gb|ADH69789.1| extracellular solute-binding protein family 3 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 281 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 39/244 (15%), Positives = 77/244 (31%), Gaps = 9/244 (3%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 ++ + S + L G+ T +G GFDVD ++ + Sbjct: 18 VIGLPACSAVLGEEESLLDADTLTVGVKTDQPNLGLEDGSGGITGFDVDVAFYIADRLGF 77 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 ++ + + +R L S ++D++ T R+ + P + + Sbjct: 78 AAEDVEVTGVTSADREEKLISGEVDMVVATYSITPARKTQVTFG-GPYYVAKQDVLVRAE 136 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + V L S+C G+ + + +++ + A RA DA Sbjct: 137 DTDVRGVRDLEDRSVCQGEGSYSAVRISEGL---GIGIEQREAPSYSACIDALRAGEVDA 193 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH---YAMVT 250 + D L + P + + + + GD V+ Y T Sbjct: 194 VSTDNLILAGFLA--EEPDAFRFVNNPFTDEKYGVGLPHGDVRACEAVNRAISQMYQDGT 251 Query: 251 AEEL 254 AEEL Sbjct: 252 AEEL 255 >gi|171186212|ref|YP_001795131.1| extracellular solute-binding protein [Thermoproteus neutrophilus V24Sta] gi|170935424|gb|ACB40685.1| extracellular solute-binding protein family 3 [Thermoproteus neutrophilus V24Sta] Length = 276 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 86/267 (32%), Gaps = 24/267 (8%) Query: 1 MYKDFFVSILCLIILFFTS------------FSTNASILGDIKKRGFLKCGINTGLVGFA 48 M + I + L + + + + IKKRG L G + + Sbjct: 8 MDYRLILGIAIGVALGVLAMALFAGQSQPQTAAACPTSVEAIKKRGKLVVGTSADWPPYE 67 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 V G G D+D R ++ ++ +++ + A++ +D++ + T Sbjct: 68 YV-EGGRIVGIDIDIARRIADSLG---VQLEIRDMKFSALIEAVKRGDVDMVIADMAVTP 123 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 RE + F D I+ + + +S V L G SI VQ GT E N Sbjct: 124 ERER--QVLFSIPYQVDTSVVIVRRGEAVSGVEALRGKSIGVQVGTVQEDWAVKTLG--N 179 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + + A R DA AL + + S A Sbjct: 180 YSKIVRYDKVYPYMVEALRKGDVDAIVVGGVVGKALVKRFPDLEQAFTVGVRYS----AV 235 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELG 255 A+ + + Y M+ + EL Sbjct: 236 AVPLCAYDLKIQIDRVIYDMLQSGELE 262 >gi|154247956|ref|YP_001418914.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154162041|gb|ABS69257.1| extracellular solute-binding protein family 3 [Xanthobacter autotrophicus Py2] Length = 296 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 51/232 (21%), Positives = 88/232 (37%), Gaps = 7/232 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA----IFDDPSKIQY 80 L + + G ++ ANG G+ VD CR ++ + K+ Y Sbjct: 38 QTLDRVAGGEAFRIGYRQFAPPYSYAAANGQPSGYIVDLCREVADGVKRTLKLPAIKVDY 97 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + A++RF A++ +IDIL + T+ R + F T+ DG G + + + Sbjct: 98 VKVTAEDRFEAVRDGRIDILCEPSSMTMSRRAL--VDFSLPTFLDGAGVVTR-GAPVKGL 154 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L G + V GTTTE TL + + + + DAY GD Sbjct: 155 EDLKGKKVGVLRGTTTEETLRSTLGQMRIAADIVTVTDHPDGLKQLADGKLDAYFGDRGI 214 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 L L + + + + A A+ +GD + +V T + E Sbjct: 215 LNYLIANSPAGNRLSLSDQYFTFETYALALPRGDQAFRLVVDATLADLYRTE 266 >gi|119387803|ref|YP_918837.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119378378|gb|ABL73141.1| amino acid ABC transporter substrate-binding protein, PAAT family [Paracoccus denitrificans PD1222] Length = 265 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 37/244 (15%), Positives = 70/244 (28%), Gaps = 13/244 (5%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F ++ ++ +A+ L IK G L+ G+ F A+G G Sbjct: 1 MKLNRRIFTALAAGVLAMGLVPPASAADLDAIKNAGTLRVGMLVDFPPFGIQDASGKADG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +D D AL + + + R L S Q+D+L + T R + F Sbjct: 61 YDADVANALGEFLGVQAQIVP---VTGPNRIPYLLSGQVDVLVASLGITEERAE--KVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 ++ L+G S+ V +T + + F+ Sbjct: 116 SKPYAGISIAVYGDGGLEVTDAEGLAGQSLAVARASTQDTGVTAVAPQ---GTDIRRFDD 172 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 A + + + + +S A+ G Sbjct: 173 DASAVQALMSGQVRLIGLSNVVFSQVSTVAGDRFDKKF---DLSSQVQGIAVAPGSDALL 229 Query: 239 NIVS 242 V+ Sbjct: 230 EQVN 233 >gi|303247515|ref|ZP_07333787.1| extracellular solute-binding protein family 3 [Desulfovibrio fructosovorans JJ] gi|302491211|gb|EFL51103.1| extracellular solute-binding protein family 3 [Desulfovibrio fructosovorans JJ] Length = 246 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 32/250 (12%), Positives = 78/250 (31%), Gaps = 24/250 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +++ + + S + + + V A+ G+ Sbjct: 1 MVKKFILALALVAMTASPSLA------------KTIVFATDATWPPMEFVNADKQISGYA 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +++ +A + ++ + F L + + + + + T R+ + F Sbjct: 49 IEYMKAAAKEAG---FTAEFKAVPWDGIFAGLAAGKYNAICSSVTITPERKK--SMDFST 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q ++ K + + G ++ Q TT + + Y + Sbjct: 104 PYFKVRQALVVPAKSAAKCIDDMKGKTLGAQISTTGHFAIKKAEGVKDKSYDEVGL---- 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK--SPLAPAIIQGDTEWY 238 R D D L N++ + + II A+ +GD E Sbjct: 160 -AFEDLYNGRIDGVVCDDPVAAQYALQNEKYKHSLKIACIIEAGDEYYGIAVKKGDKEDL 218 Query: 239 NIVSWTHYAM 248 ++++ A+ Sbjct: 219 DLINKGIEAV 228 >gi|86153292|ref|ZP_01071496.1| histidine-binding protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843018|gb|EAQ60229.1| histidine-binding protein [Campylobacter jejuni subsp. jejuni HB93-13] Length = 251 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 76/238 (31%), Gaps = 16/238 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++++ L+ LF + S + + + LK G F N GFD Sbjct: 1 MKKILSIALVALVGLFLGACSDSKN--KESNASVELKVGTAPNYKPFNYK-ENSKLTGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR- 119 D ++ + KI ++ N AL++ +ID+++ T R + F Sbjct: 58 TDLVEEIAKK---NGIKIVWVETNFDGLIPALKAGKIDMIASAMSATDER--RQSVDFTK 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 P + + + + L G I VQ GT L + + + Sbjct: 113 PYYMSKNLYLKLKNNDSLQTKNDLEGKKIGVQLGT-----LQENTAKAIKNAQVQSNKDL 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A + ++ DA D + P + + A + + Sbjct: 168 NIAVLALKNNKIDAIVADQDTAKGFLA--ENPELVSFYQETDGGEGFSFAFDKNKQKN 223 >gi|307312875|ref|ZP_07592504.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] gi|306899389|gb|EFN30022.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] Length = 269 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 83/259 (32%), Gaps = 33/259 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + ++ NA L+ G+ F ++G +G+D Sbjct: 1 MKNWQTSLTGLITAVLLSAAPANADT---------LRVGMECTYAPFNYRTSDGKLEGYD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + +S I D +Y+ AL + + D++ + T R+ + F Sbjct: 52 VDVAKRISEIIGVD---FEYVCQEWDGMIPALLANKFDLIIASMSITDKRKE--QIDFSS 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQ--------LSGASICVQAGTTTELTLADYFKAHNMKYH 172 + K + G I V+ +T ++F A K Sbjct: 107 PYRNSVGRIVGPVGKDLKLFDDKGQPVVGHFDGLRIGVERASTYF----EWFSAKLPKAD 162 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------L 226 ++++ E + + R D + + L+ + ++ + P + Sbjct: 163 LVLYDSNEAMYLDLKNGRVDVIMTNPMKAHLSFLSGEGKGKYEFIG-PEVNEPKFFGPGV 221 Query: 227 APAIIQGDTEWYNIVSWTH 245 + +G+ E + +S Sbjct: 222 GVGLRKGNDELRDKISAAI 240 >gi|323142443|ref|ZP_08077264.1| ABC transporter, substrate-binding protein, family 3 [Phascolarctobacterium sp. YIT 12067] gi|322413088|gb|EFY03986.1| ABC transporter, substrate-binding protein, family 3 [Phascolarctobacterium sp. YIT 12067] Length = 258 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 68/217 (31%), Gaps = 8/217 (3%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 + G++ + G D+D R ++++ P++ + L+ Sbjct: 27 KKMVIGLDDNFAPMGYRNEKNEIVGMDIDLAREACKRAG---MEVEFKPIDWGAKEAELK 83 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 SK+ID + RE G+ + Q ++ K I ++ L G + VQ Sbjct: 84 SKRIDAIWNCFTVNPEREKVYGM--SKPYINNSQLVVVPKDSPIKTLEDLKGKIVAVQDD 141 Query: 154 TTTELTLADYFKA--HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 +T L + I R DA D +P Sbjct: 142 STGSYLLEQPAHKELAASMKEVRKYPDFAAIYMEIDNKRVDAAIVDAVLARGYYDK-KKP 200 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + IL + +A A + D ++ + + M Sbjct: 201 GAYRILEQNMGDEVVAIAFRKDDKDFKDRIDKAMDEM 237 >gi|302333524|gb|ADL23717.1| amino acid ABC transporter protein [Staphylococcus aureus subsp. aureus JKD6159] Length = 485 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 92/283 (32%), Gaps = 25/283 (8%) Query: 3 KDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51 K IL L +L T+ + IK+RG L+ G++ V Sbjct: 2 KCLIRFILVLGLLISSAMVYINPTAHAEQDQTWEKIKERGELRVGLSADYAPMEFEHTVN 61 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++ G D+D + ++ + K++ + ++ AL++ +IDI+ T R+ Sbjct: 62 GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118 Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + F ++ K + + + Q GT E + Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228 R+ ++ A ++ + + + A N + +V + + +A Sbjct: 173 NASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + + + ++ T + + N D + Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273 >gi|15889639|ref|NP_355320.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15157537|gb|AAK88105.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 256 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 98/273 (35%), Gaps = 24/273 (8%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGFDVD 62 FF ++L ++F+ +A ++ GI N F A+G W+G+++D Sbjct: 2 KFFATLLAGTAFAVSAFTASAD----------VRFGIMNESYPPFFAKDASGKWQGWEID 51 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A+ + + K + L+ ALQ+K+ D++ + T RE + F Sbjct: 52 LMDAVCAEM---KEKCSIVELSWDGLIPALQTKKFDVIWSSMSNTQEREKV--IDFTNKY 106 Query: 123 YFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y I K + ++ + G +I +Q T YF A ++ ++E Sbjct: 107 YNTPSKLIGAKGEKPGAAPEDVKGKTIGIQVATIQSEYYKKYFAA---VADEKTYQTLDE 163 Query: 182 IDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A R D GD L +K + + K + + G + Sbjct: 164 AFQDLAAGRIDYVFGDSLVLDAFVKSDAGKDCCADMGNVADDKEIMGLGVSGGLRKDDTE 223 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 + A + A ++++K + D+ Sbjct: 224 LKNKLNAAIAA---VRASGKYDEITKKYFSFDI 253 >gi|311898837|dbj|BAJ31245.1| putative ABC transporter substrate-binding protein [Kitasatospora setae KM-6054] Length = 316 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 86/240 (35%), Gaps = 12/240 (5%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAI 71 + + + +I+KRG+L G++ + + +G +GFD+D RA++ ++ Sbjct: 58 TGVSLPPAQQAGARIQEIRKRGYLVVGVDQSAYNWGYRDSLSGKIEGFDIDLARAVAKSV 117 Query: 72 FDDPSKIQYLPLNAKERFLALQS--KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 D +K+ + +R LQ + ID++ R T + +AF + Q Sbjct: 118 LGDENKLVLKTIATADRVKLLQQQPQPIDLIVRAMTITC--DRMKQIAFSAPYFKVSQRV 175 Query: 130 IMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + K S L G +C +++ L + + + + Sbjct: 176 VAPKTAHADSVAKALGGKRVCAALNSSSHTELKANA---HGAASIVTPDNQLDCLVLMEL 232 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 DA D S A+ ++ + + + + + Q DT+ V+ Sbjct: 233 GEADATLSDSSLAAAMVAQDE---TMELAGESFLPTYMGVGMNQRDTDLVGWVNQVLVDW 289 >gi|229056202|ref|ZP_04195628.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus AH603] gi|228721136|gb|EEL72668.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus AH603] Length = 264 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 82/252 (32%), Gaps = 16/252 (6%) Query: 1 MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + V+ + L F + S + + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESSTTSSNSKKEFRYAMSGLYKPFNYKENDGKLVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL + P + + LQSK+ D++ + T R + F Sbjct: 61 FDVEIGEALGKKMGMKPVPVT---NPWETLIQGLQSKKYDVILGSMAITEER--LKAVNF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNISISSPEDLKGKKIGVVKASTFKTLVA------KYTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S ++ + AI + + + Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSNIKEAGKPLNLDEMGIAIHKDNKDM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|167563465|ref|ZP_02356381.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia oklahomensis EO147] gi|167570633|ref|ZP_02363507.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia oklahomensis C6786] Length = 264 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 74/219 (33%), Gaps = 13/219 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F +G GFDVD A+ + + K ++ ALQ Sbjct: 30 KEIRFGVEASYAPFEYKTPDGKLAGFDVDIGNAVCAKL---KVKCVWVENAFDGLIPALQ 86 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152 +++ D ++ + T R + F Y I K G + + + L G I V Sbjct: 87 ARKFDAINSDMTITDQRRR--AIDFTDPIYTIPNQLIAKKGSGLLPTTASLKGKRIGVLQ 144 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT E+ + + ++ + ++ R DA D A L+ + + Sbjct: 145 GTIQEVYAKKRWAPAG--VEVVPYQTQDLAYEDLKSGRLDATFQDSEAGAKGFLSKPQGA 202 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246 +S + + + + D + V+ Sbjct: 203 GFAFAGGHVSDAEILGAGVGFGLRKNDAQLKTAVNQALK 241 >gi|39997743|ref|NP_953694.1| amino acid ABC transporter amino acid-binding protein [Geobacter sulfurreducens PCA] gi|39984635|gb|AAR36021.1| amino acid ABC transporter, amino acid-binding protein [Geobacter sulfurreducens PCA] gi|298506679|gb|ADI85402.1| amino acid ABC transporter, amino acid-binding protein [Geobacter sulfurreducens KN400] Length = 269 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 74/243 (30%), Gaps = 22/243 (9%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 + + + ++ L + L G+ F G G VD Sbjct: 14 WLIGLFFVLFLNVSLALAAGDS---------LVVGMELAYPPFEMTDTTGKPTGVSVDLA 64 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 L A+ I + AL++ +ID++ + R + F Sbjct: 65 TELGKALGKK---IVIQNMAFDGLIPALKTGKIDLIISSMTANAER--GKSIDFSDPYLN 119 Query: 125 DGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G ++ K+ + L G S+ V+ GTT + K +V ++ Sbjct: 120 TGLCLLVKKESPAKGIGDLDQPGRSVAVKKGTTGHAWASKNLKKA----RVLVLDKEAAA 175 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + DA+ D + Y + + + + K A I +G+ + V+ Sbjct: 176 VLEVVQGKADAFIYDQMSTY--QNWQKNRATTRAILEPFQKESWAVGIRKGNDDLRKKVN 233 Query: 243 WTH 245 Sbjct: 234 AFL 236 >gi|288961663|ref|YP_003451973.1| polar amino acid transport system substrate-binding protein [Azospirillum sp. B510] gi|288913943|dbj|BAI75429.1| polar amino acid transport system substrate-binding protein [Azospirillum sp. B510] Length = 260 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 79/245 (32%), Gaps = 13/245 (5%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 +L + S + + L IK G LK G F A+G GFDV+ Sbjct: 8 LVAGLLQAAAVTAGSSAWAQADLDRIKADGALKIGTEGTYAPFTYHDASGALVGFDVEIG 67 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 R ++ I +++L L +++ D + T R+ F Sbjct: 68 REIAKRIGVK---VEFLEGKWDGLIAGLDARRYDAVINQVGITEARKA--KYDFSDPYIT 122 Query: 125 DGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 I+ I + L G Q+ T+ LA+ A + + ++ Sbjct: 123 SRAVLIVRGDNDAIKGFADLKGRKSA-QSLTSNFGKLAEAAGA-----QLVGTDGFDQSI 176 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 R DA T + S + + ++ I+ + +G+ + ++ Sbjct: 177 QLVLNGRADA-TVNDSLSFLDFKKHKPDADVKIVATRDDADQSGIIVRKGEAKLVAAINE 235 Query: 244 THYAM 248 A+ Sbjct: 236 ALAAI 240 >gi|186474524|ref|YP_001863495.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184198483|gb|ACC76445.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 256 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 87/250 (34%), Gaps = 23/250 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ + +L + + A I + G++ F A+G GF+ Sbjct: 1 MKK-----LISVFVLSSMAVGSYAKDWSAI------RFGVDPTYPPFESKDASGKLAGFE 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + +K ++ + AL++++ D + T R + F Sbjct: 50 IDIGNEVCARL---RAKCVWVENDFDGMIPALKARKFDAVLSGMSITAQRASQIA--FTN 104 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K G + + L +I VQ GT E ++ + N + ++ Sbjct: 105 KLWNSSLRLVARKDSGLLPTAESLKSKTIGVQQGTVGETYAKQHWASSN--VTVVPYQNQ 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP----DIISKSPLAPAIIQGDT 235 +++ A R DA L R + + + D S A + + DT Sbjct: 163 DQVYADLTVGRLDALLIGDVQAQMGFLQTPRGAGYAFVGDRVVDPTSDKGAAIGLRKEDT 222 Query: 236 EWYNIVSWTH 245 + ++ Sbjct: 223 DLREKINQAI 232 >gi|187478361|ref|YP_786385.1| ABC transporter solute-binding protein [Bordetella avium 197N] gi|115422947|emb|CAJ49476.1| ABC transporter, solute-binding protein [Bordetella avium 197N] Length = 252 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 72/207 (34%), Gaps = 7/207 (3%) Query: 39 GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98 G++ GFD+D R S + + +++ P++ + L K++D Sbjct: 30 GLDDNFPPMGFRDEKNQLVGFDIDMAREASRRMGVE---VEFKPIDWSAKEAELNGKRVD 86 Query: 99 ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158 +L T R+ ++ F + Q ++ I + + L+G + Q G++ Sbjct: 87 VLWNGLTITDERKKNIA--FTQPYMANHQIILVTASSPIQTKADLAGRVLGAQDGSSAVD 144 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 + +F A R D + + L + RP E+ +L Sbjct: 145 AIKKEEAVAKSLKELKLFGDNVTALMDLSATRLD--GVVVDEVVGRYLASKRPGEYRVLD 202 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + + DT+ + + T Sbjct: 203 ENFGTEDYGVGVRKDDTDLHAKLDRTL 229 >gi|148655938|ref|YP_001276143.1| extracellular solute-binding protein [Roseiflexus sp. RS-1] gi|148568048|gb|ABQ90193.1| extracellular solute-binding protein, family 3 [Roseiflexus sp. RS-1] Length = 288 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 69/229 (30%), Gaps = 36/229 (15%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNA-------------------------SILGDIKKR 33 M K ++ + ++ A L I+ Sbjct: 1 MQKQTLIMLAFIAASLVMSACGGAPAAQPTQPAAQPTQPTAQPTQPAAQTDGKLAQIRAA 60 Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G L G + + + NG++ GFD+D RA+ + + ++ + +LQ Sbjct: 61 GKLIVGTSADYPPYESIDENGNFVGFDMDLIRAVGEKLGVE---VEIRDMPFDSLIASLQ 117 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQ 151 +ID + T RE + F FI I + +G +I Q Sbjct: 118 EGKIDAVIAAMQATAEREE--KVDFTIPYRMTKDAFIGAGNTTITLNKPEDAAGLTIGAQ 175 Query: 152 AGTTTELTLADYFKAHNMKY--HPIVFERVEEIDAAYRAHRCDAYTGDI 198 GT E + A + +ER ++ + R D Sbjct: 176 TGTVQEGWIQKNLVATGLTPADKVFSYERADQAALDLASGRLQLVLMDA 224 >gi|303229960|ref|ZP_07316734.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Veillonella atypica ACS-134-V-Col7a] gi|302515326|gb|EFL57294.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Veillonella atypica ACS-134-V-Col7a] Length = 260 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 88/251 (35%), Gaps = 15/251 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K ++++ + + + + ++ G L+ G T F + + + GFDV Sbjct: 5 KKLTAIALVAVAAMGLLAGCGSEKS-KMTQEAGVLRVGSETTFPPFEFTEGD-KYVGFDV 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + K+++ + A+QS ID+++ + T RE L F + Sbjct: 63 DLSEAIAKKLG---LKMEFKSMGFDALIPAVQSGDIDMIAAGINATPEREK--ALDFSDV 117 Query: 122 TYFD--GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + I ++ +L+G ++ VQ GT + Sbjct: 118 YFDQGGFITVVRKNNTSIHNMDELAGKTVGVQIGTVPVD-----MAKAIPNTTVKEMDSN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 I +A D D A+ L + ++ + + + +G+ E + Sbjct: 173 ANIFMELKAGTIDGAIIDN-AVAMYYLKQGADKDLKLVGEPTKAPGIVLGVKKGNKELQD 231 Query: 240 IVSWTHYAMVT 250 V+ + Sbjct: 232 AVNKALKELKE 242 >gi|229587937|ref|YP_002870056.1| putative ABC transporter exported protein [Pseudomonas fluorescens SBW25] gi|229359803|emb|CAY46653.1| putative ABC transport system, exported protein [Pseudomonas fluorescens SBW25] Length = 267 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 91/250 (36%), Gaps = 14/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + + + A + D KRG LK G++ + F G+ GF+ Sbjct: 2 MMKKYLSMLLLGVTALVAAAAVQAGAIDDAVKRGTLKVGMDPTYMPFEMTDKRGEIIGFE 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ ++ + A + + D++ T R +L L F Sbjct: 62 VDILKAMAKSMGVK---LELVSTGYDGIIPAFLTGKFDMIGSGMTLTQER--NLRLNFSE 116 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K+ I S L+ + + TT E+ + Sbjct: 117 PFIVVGQTLLIRKELEGTIKSYKDLNDEKYRLTSKLGTTGEMVAKKLISKAKYHG----Y 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +E + DA+ D + V L + + PLA + +GD + Sbjct: 173 DNEQEGVLDVVNGKADAFVYDAPYNVVAEKKVGNGK-LVFLEEPFTFEPLAFGLKKGDYD 231 Query: 237 WYNIVSWTHY 246 N ++ + Sbjct: 232 SINFINNFLH 241 >gi|330970706|gb|EGH70772.1| extracellular solute-binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 254 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 80/255 (31%), Gaps = 27/255 (10%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 YK + + ++F+ +K GI F A+G GFD Sbjct: 4 YKKILLIAAATLAFSGSAFAE------------TMKMGIEGAYPPFNNKDASGQVVGFDY 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + +AL + + + + + AL + + D L + T R+ + F Sbjct: 52 EIGQALCARMKVECEAVT---SDWDGIIPALMANKFDFLISSLSITEERK--QVVDFTNP 106 Query: 122 TYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 Y + FI K I + L+G S+ Q T L D + Sbjct: 107 YYSNKLQFIAPKTSSIDVSSVEKAKESLAGKSVGAQRSTLAATWLEDKLG----IMDAKL 162 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ E + R DA D + + + ++ + A+ +GD Sbjct: 163 YDTQENAFLDLSSGRVDAMLADKYVSFEWLKSEAGQNFEFKGEPVVEDDKIGIAVRKGDD 222 Query: 236 EWYNIVSWTHYAMVT 250 ++ ++ Sbjct: 223 ALRERLNAALKEIIA 237 >gi|323697765|ref|ZP_08109677.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. ND132] gi|323457697|gb|EGB13562.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans ND132] Length = 286 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 83/222 (37%), Gaps = 11/222 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 S L I KRG ++ G +T +A NGD+ GF+++ R L+ + ++++P Sbjct: 45 GSQLDVILKRGTIRVGFDT-FKPWAMKDKNGDYIGFEIEVARQLAKDMGVK---VEFVPT 100 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 AL + + DI+ T R + + + +G +S+ Sbjct: 101 KWSGIIPALLTGKFDIIIGGMSVTPQRNLKVNFSLPYEYSGMSIVASRKLAEGRASIEDF 160 Query: 144 --SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 G +I V+ GTT ++ + F+ + R A Sbjct: 161 NNPGTTIAVRLGTTAAEAAKNFLPQAK----ILFFDEESQTIQELLNERVHAVVASNPLP 216 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 L + L D ++ P+A A+ +GD ++ N ++ Sbjct: 217 LTLSKEYAD-QLFLPLKDDFTREPIAFAVKKGDLDFLNWLNN 257 >gi|238919598|ref|YP_002933113.1| hypothetical protein NT01EI_1697 [Edwardsiella ictaluri 93-146] gi|238869167|gb|ACR68878.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 257 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 86/246 (34%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++L L +L + + ++ L +++ G +K G + A+G GFD Sbjct: 1 MMKKTALALLALTLLSGGAQAQHSDDLSEMRSAGSIKFGTEGTYPPYTYHDASGKLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RA+++ + P ++ L +K+ D + T R+ F Sbjct: 61 VDIARAVAAKMGLKP---VFVEGRWDGLIAGLSAKRYDAVINQVGITPERQA--KFDFSD 115 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ +++ L G Q+ T+ LA+++ A + + Sbjct: 116 PYIGAKAVLIVRSDNTRLNNFDDLRGQK-AAQSLTSNYARLAEHYGA-----ELVPTDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R A D + + ++ ++ A + +G + Sbjct: 170 NQSLELVISGRAVATLNDNLSYLDFRQHKPSAP-LKVVAVADQRADSAILVRKGQPQLVA 228 Query: 240 IVSWTH 245 ++ Sbjct: 229 ALNHAL 234 >gi|171779920|ref|ZP_02920824.1| hypothetical protein STRINF_01707 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281268|gb|EDT46703.1| hypothetical protein STRINF_01707 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 269 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 85/278 (30%), Gaps = 15/278 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWK 57 M K L L + T+ ST+ + I+ +G + + F Sbjct: 1 MKKFLGGLFLLLALGTMTACSTSGTSQKSIQNKGKIVIATESEFAPFEFKTLIDGKDTLV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D++ +A++ + + ++ ++ S + DI T R+ Sbjct: 61 GADIELAKAIAKELDVKAD---FSVMSFNNVLASVTSGKADIAIAGISVTDERKK--AYE 115 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K +S+ L+G S+ Q G+ E D + + Sbjct: 116 FSDAYYEAENVVILKKADLATYTSLESLAGKSVGAQKGSIQENIAKDQLPS----SSLVS 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E+ + ++ A + + + + A A +G Sbjct: 172 LTSNGEMINELKNNQLQAVVLEKAIAEGYISQTPDLAIADMPLKSTDTDAYAVAFAKGTD 231 Query: 236 -EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + V+ + E + + ++ ++ + Sbjct: 232 KKLIASVNKVIKKAKKSGEFDAWIEKASTYTQSSSESE 269 >gi|257483719|ref|ZP_05637760.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289650582|ref|ZP_06481925.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298489315|ref|ZP_07007330.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156166|gb|EFH97271.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320326492|gb|EFW82544.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. B076] gi|320331783|gb|EFW87721.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330954814|gb|EGH55074.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae Cit 7] gi|330987164|gb|EGH85267.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331012128|gb|EGH92184.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 254 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 80/255 (31%), Gaps = 27/255 (10%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 YK + + ++F+ +K GI F A+G GFD Sbjct: 4 YKKILLIAAATLAFSGSAFAE------------TMKMGIEGAYPPFNNKDASGQVVGFDY 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + +AL + + + + + AL + + D L + T R+ + F Sbjct: 52 EIGQALCARMKVECEAVT---SDWDGIIPALMANKFDFLISSLSITEERK--QVVDFTNP 106 Query: 122 TYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 Y + FI K I + L+G S+ Q T L D + Sbjct: 107 YYSNKLQFIAPKTSSIDVSSTEKAKESLAGKSVGAQRSTLAATWLEDKLG----IMDAKL 162 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ E + R DA D + + + ++ + A+ +GD Sbjct: 163 YDTQENAFLDLSSGRVDAMLADKYVSFEWLKSEAGQNFEFKGEPVVEDDKIGIAVRKGDD 222 Query: 236 EWYNIVSWTHYAMVT 250 ++ ++ Sbjct: 223 ALRERLNAALKEIIA 237 >gi|224826540|ref|ZP_03699641.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] gi|224601141|gb|EEG07323.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] Length = 257 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 81/256 (31%), Gaps = 28/256 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++L L + L+ + F V ANG GF+ Sbjct: 1 MKKPIILALLSLTAPLAAHSAE------------TLRIATDATYPPFEYVDANGKVSGFE 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF A+ + + + + LQ K+ D + + + T R + F Sbjct: 49 VDFAYAVCKEM---KVQCEVVNQPWDGLIPGLQVKKYDAIMSSMNITDERRK--AVDFSK 103 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y F+ K + LSG +I VQ GT + + F + Sbjct: 104 VYYLMQNRFVTAKGHKGEIQPAALSGKTIAVQTGTPQDRFVTQQF---GKSATIKRYVNA 160 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-------DIISKSPLAPAIIQ 232 ++ + R D G+ L L + D + +A A+ + Sbjct: 161 QDPMMELTSGRADYTFGNTVQLQKGFLETAPGKGFEFVGPVFDGRQDKVLGEGVAVALHK 220 Query: 233 GDTEWYNIVSWTHYAM 248 D+ + A+ Sbjct: 221 QDSALKARFNAAIDAV 236 >gi|289626774|ref|ZP_06459728.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648365|ref|ZP_06479708.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330868473|gb|EGH03182.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 273 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 21/257 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I L+ L ++ + + L ++K L + F+ + + GFD Sbjct: 1 MNYRALLGI-GLVTLAASTQALAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ + ++ + S + DI + + R Sbjct: 60 VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174 + I S LSG + + + ++ E L + P+ Sbjct: 116 YYASPAVIVVNASDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFDD 175 Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 ++ R DA + L K D+ + + + + P + Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGETLYEEPNS 232 Query: 228 PAIIQGDTEWYNIVSWT 244 AI + D EW V Sbjct: 233 VAIEKDDPEWDAKVRQV 249 >gi|88597125|ref|ZP_01100361.1| cjaC protein [Campylobacter jejuni subsp. jejuni 84-25] gi|218562373|ref|YP_002344152.1| histidine-binding protein precursor [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|88190814|gb|EAQ94787.1| cjaC protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112360079|emb|CAL34871.1| histidine-binding protein precursor [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925990|gb|ADC28342.1| histidine-binding protein precursor [Campylobacter jejuni subsp. jejuni IA3902] gi|315928978|gb|EFV08224.1| histidine-binding protein precursor [Campylobacter jejuni subsp. jejuni 305] Length = 251 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 76/238 (31%), Gaps = 16/238 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++++ L+ LF + S + + + LK G F N GFD Sbjct: 1 MKKILSIALVALVGLFLGACSDSKN--KESNASVELKVGTAPNYKPFNYK-ENSKLTGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR- 119 D ++ + KI ++ N AL++ +ID+++ T R + F Sbjct: 58 TDLVEEIAKK---NGIKIVWVETNFDGLIPALKAGKIDMIASAMSATDER--RQSVDFTK 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 P + + + + L G I VQ GT L + + + Sbjct: 113 PYYMSKNLYLKLKNNDSLQTKNDLEGKKIGVQLGT-----LQENTAKAIKNAQVQSNKDL 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A + ++ DA D + P + + A + + Sbjct: 168 NIAVLALKNNKIDAIVADQDTAKGFLA--ENPELVSFYQETDGGEGFSFAFDKNKQKN 223 >gi|157165339|ref|YP_001466156.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Campylobacter concisus 13826] gi|112800359|gb|EAT97703.1| L-cystine-binding protein TcyA [Campylobacter concisus 13826] Length = 259 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 77/243 (31%), Gaps = 13/243 (5%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F LC++ + S +A+ IKK G ++ F+ + G+DV+ Sbjct: 7 FKFGALCVVGCLLSLNSASANSYEQIKKDGVIRIATEGVYSPFSFHNEKDELMGYDVEIA 66 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RA++ + P +++ + A + + D++ T R+ + Sbjct: 67 RAVAKKLGVKP---KFIEASWDAMLAAFDAGKADVVFNQVSITDERKK--KYDYSVPYML 121 Query: 125 DGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 ++HK I S + L G + T+ +V + + + Sbjct: 122 SYSAIVVHKDNNDIKSFADLKGKRSVHSVNSMWIPTVE------KYGAKLVVADSLSDQI 175 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 R D D Y + I+ A + +G+ E N ++ Sbjct: 176 NLIITKRADDTIDDAVMFYDYIKQHPNAP-IKIIEAGDEPMYTAAIVKKGNKELLNKINN 234 Query: 244 THY 246 Sbjct: 235 ALN 237 >gi|330961755|gb|EGH62015.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 273 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 21/257 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I L+ L ++ + + L ++K L + F+ + + GFD Sbjct: 1 MNYRALLGI-GLVTLAASTQALAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ + ++ + S + DI + + R Sbjct: 60 VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174 + I S LSG + + + ++ E L + P+ Sbjct: 116 YYASPAVIVVNAADDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFED 175 Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 ++ R DA + L K D+ + + + + P + Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGETLYEEPNS 232 Query: 228 PAIIQGDTEWYNIVSWT 244 AI + D EW V Sbjct: 233 VAIEKDDPEWDAKVREV 249 >gi|161870463|ref|YP_001599635.1| polar amino acid transport system substrate-binding protein [Neisseria meningitidis 053442] gi|161596016|gb|ABX73676.1| polar amino acid transport system substrate-binding protein [Neisseria meningitidis 053442] Length = 268 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 79/224 (35%), Gaps = 10/224 (4%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 + N F + + G+ +GFDVD A++ A KI++ F AL Sbjct: 37 KVYRVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALN 93 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQA 152 + D++ T + + F + Q ++ K K ISS L + V Sbjct: 94 NGDADVVMSGVTITD--DRKQSMDFSDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVT 151 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-RP 211 G T + +++ N FE V I D+ D + + N + Sbjct: 152 GYTGDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKG 209 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + V LPD + A+ +GD +++ + + E Sbjct: 210 MDFVTLPD-FTTEHYGIAVRKGDEATVKMLNDALKKVRESGEYD 252 >gi|68535318|ref|YP_250023.1| putative extracellular solute-binding protein [Corynebacterium jeikeium K411] gi|260578467|ref|ZP_05846381.1| ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium jeikeium ATCC 43734] gi|68262917|emb|CAI36405.1| putative extracellular solute-binding protein [Corynebacterium jeikeium K411] gi|258603489|gb|EEW16752.1| ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium jeikeium ATCC 43734] Length = 361 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 14/222 (6%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I +RG L G+ L +GD GF+VD R ++ IF DP++I++ + ++E Sbjct: 96 QIMRRGRLVVGVAQSLNRLGFRDPVSGDVAGFEVDLAREIARDIFGDPNRIEFRYVESRE 155 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R AL+S +DI+ R TL R L F ++ I S + L + Sbjct: 156 RAEALKSGDVDIVVRTMSPTLSR--QSKLEFSIPYLQVHSRLLVLSDSQIESFNDLHNKT 213 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +CV +T+ + + Y ++ + + A + + DA D + L L+ Sbjct: 214 VCVTRDSTSAVRVKQY-----DVGRLLLTQAWTDCLMAMQRFQADAIFTDDAILTGLRAQ 268 Query: 208 NDRPSEHVILPDIISK----SPLAPAIIQGDTEWYNIVSWTH 245 + + P+ SP P + T V+ T Sbjct: 269 DPYTTLVADAPETSYYSVAISP--PGFPKNTTGLVMQVNSTM 308 >gi|295702708|ref|YP_003595783.1| L-cystine import ABC transporter L-cystine-binding protein TcyA [Bacillus megaterium DSM 319] gi|294800367|gb|ADF37433.1| L-cystine import ABC transporter, L-cystine-binding protein TcyA [Bacillus megaterium DSM 319] Length = 273 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 69/229 (30%), Gaps = 13/229 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S+ + +KK G L G F GFDV+ + ++ + + Sbjct: 36 SSQEDLYNKVKKDGVLTIGTEGTYPPFTFHDDKQKLTGFDVELAQEVAKRLGVKAE---F 92 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISS 139 F L +K+ D+++ + F G I+ K + I S Sbjct: 93 KETQWDGMFAGLDAKRFDMIANEVGI--REDRQKKYDFSDPYIQSGAVLIVRKDEKDIKS 150 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G Q+ T+ +A + A+ E + A+R DA D Sbjct: 151 FKDLKGKKSA-QSLTSNYKDMAQSYGAN-----ITSAEGFAQAVELMSANRVDATINDKL 204 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + K + I + + + + + V+ M Sbjct: 205 SFLDYKKKHPNAP-IKIADEKSDGAASGFMFRKDSGKLVDEVNKALKDM 252 >gi|90418079|ref|ZP_01225991.1| periplasmic substrate-binding protein, ABC-type amino acid transporter [Aurantimonas manganoxydans SI85-9A1] gi|90337751|gb|EAS51402.1| periplasmic substrate-binding protein, ABC-type amino acid transporter [Aurantimonas manganoxydans SI85-9A1] Length = 265 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 81/251 (32%), Gaps = 19/251 (7%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 A K + G F + A+G+ +GFDVD +AL + + + ++ Sbjct: 21 AQAQESDADKDWSKVVIGTEGAYPPFNFLDASGELQGFDVDIAKALCAEMKVE---CSFV 77 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--S 139 + ALQ+ D L + T RE + F Y + K I+ + Sbjct: 78 TQDWDGIIPALQNGNFDALVASMSITPEREEQIA--FTNKYYQTPPAIAVPKDSDITEAT 135 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G +I Q TT YF + EE + R DA D+ Sbjct: 136 AEALAGKAIGAQTSTTHARAAESYFP----DAEVRQYPTAEEYKLDIESGRVDAVVDDVV 191 Query: 200 ALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 L ++ L D + P + + QG + + + A+ Sbjct: 192 VLDEWLKSDAGACC--KLLDTLKADPAIYGKGIGIGLRQGSDKLAGMFNDAIAAIRENGT 249 Query: 254 LGITQKNINQV 264 QK + Sbjct: 250 YDEVQKKYFEF 260 >gi|222102916|ref|YP_002539955.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] gi|221739517|gb|ACM40250.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] Length = 279 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 87/233 (37%), Gaps = 13/233 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L DI L+C + FA + GFDVD C A+++ + P+ Sbjct: 25 DQLADIMAAKTLRCATFADVPPFASPDPKTREMAGFDVDLCNAIAAKLGVKAE---IKPV 81 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + + R ++ ++DI N +TL R + F Y + I+ + + Sbjct: 82 SVEARVPEVKLGRVDITVANLAYTLSRAEQIQ--FSDPYYLAKEMLIVPADTAGKTKADF 139 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISALY 202 SG + G+T+E+++ K P+ F+ A + + + + ++ Sbjct: 140 SGKRLASTKGSTSEMSI------KLNKSDPLTFQDTASAYLAVQQGKAEGMVANTMTTTK 193 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + + ++ D + P+ + + + ++ T A+ E+ Sbjct: 194 FVNESQTKGKRMRMIDDPMLYQPIGVGMKKDEPALTAKINDTLRALDADGEIN 246 >gi|283852210|ref|ZP_06369483.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. FW1012B] gi|283572436|gb|EFC20423.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. FW1012B] Length = 250 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 90/251 (35%), Gaps = 15/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L + S A+ + GI+ G F V +G GFD Sbjct: 1 MRKRLGLLLAALAVFVLCCGSLAAA------EEKVYVNGIDFGFPPFGFVDKDGKPTGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ ++ + K+++ P++ AL +K+IDI++ T R + + F Sbjct: 55 VESLDWIAKKMG---FKVKHQPMDWDGIIPALLAKKIDIIASGMSATAER--AQKVDFSI 109 Query: 121 ITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y Q ++ K+ + L+ G + +Q GT T L + K+ + ++ Sbjct: 110 PYYEVTQVLVVPAKETATLPQLLTSGKKLGIQRGTVTAKLLEEMAAKPEYKFEAVPYDST 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R D + K P + A+ + D E+ + Sbjct: 170 DLSMEDVKVGRIAGSGMDSTI---AKELMKNPGFKIAGTFDADPEKYGYAMRKEDKEFQD 226 Query: 240 IVSWTHYAMVT 250 V+ ++ Sbjct: 227 KVNKGLKLLMA 237 >gi|269962668|ref|ZP_06177013.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832591|gb|EEZ86705.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 258 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 77/245 (31%), Gaps = 14/245 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K L + +L T + S L +I +G L+ G ++GF Sbjct: 1 MKKTLL--ALGMCLLAMTQVAHAESRLQEILDKGVLRVGTTGDWNPMTMKDPATNSYRGF 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D L+ + ++++ + K + + + D ++ + + R G + Sbjct: 59 DIDVTTELAKDLGVK---VEFVATDWKTLVNGITANKYD-ITGSASLNMSRAKVAGYSQP 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 S + + GT E + D+F + IV E Sbjct: 115 YFYLAFVPVVQKKDLAKFSDWADFDKPDVKVAATLGTVQEKMVKDFFPSAQH----IVIE 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A R D L + V + + +P+A + Q D W Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVEKFKQ-LAIVPVKEPRKPTPIAMLLPQDDQVW 229 Query: 238 YNIVS 242 N ++ Sbjct: 230 INYIN 234 >gi|120612399|ref|YP_972077.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120590863|gb|ABM34303.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 302 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 49/232 (21%), Positives = 89/232 (38%), Gaps = 9/232 (3%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFC 64 F +++ + + IK+ G L+ G F+ + +G +GFD Sbjct: 36 FDALVAQGPVASAETIAASPWASKIKQAGTLRLGGTQTSNLFSLLNEKDGKLRGFDAGLA 95 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ I D SK+Q+ +N+ R L + Q+D++ T R ++F Y Sbjct: 96 QLITRYILGDASKVQFTQVNSSTREQVLINGQVDMVVATYSITPARAE--KISFAGPYYT 153 Query: 125 DGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G ++ + I SV+ L G + QAG+T LA + F+ +E Sbjct: 154 SQAGVLVKASNQAIQSVNDLGGRKVATQAGSTGPAILAQFAPK----STVQEFQTHQEAL 209 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 A R R AY D + L L+ + ++ P + +G Sbjct: 210 DALRQGRVAAYVTDHTLLLNT-LSLGTADAKLAGAPFGAQDPYGIGLPKGSD 260 >gi|221200818|ref|ZP_03573859.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia multivorans CGD2M] gi|221207014|ref|ZP_03580025.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia multivorans CGD2] gi|221210264|ref|ZP_03583244.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia multivorans CGD1] gi|221169220|gb|EEE01687.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia multivorans CGD1] gi|221173088|gb|EEE05524.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia multivorans CGD2] gi|221179390|gb|EEE11796.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia multivorans CGD2M] Length = 260 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 42/243 (17%), Positives = 85/243 (34%), Gaps = 21/243 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ + + +L ++ S A K ++ G++ F A+G GFD Sbjct: 1 MKK--ILAAVTVALLAVSAGSAYA------KDWTTVRFGVDASYPPFESKDASGKVVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + +K ++ + AL++++ D + + T R+ + F Sbjct: 53 VDLGNEICRRL---NAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPARQEQIA--FSS 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K G+ + L G SI V+ GT E Y+ + ++ Sbjct: 108 KLFNTPTRLVAKKGSGLMPTAESLKGKSIGVEQGTIQETYAKTYWAPKG--VKVVPYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +++ A A R D D L R + + + + D Sbjct: 166 DQVYADLIAGRLDGALQDAVQAEIGFLKTPRGASFDFAGKDLDDPKTLGEGAGIGLRKED 225 Query: 235 TEW 237 T+ Sbjct: 226 TDL 228 >gi|121635265|ref|YP_975510.1| histidine-binding periplasmic protein [Neisseria meningitidis FAM18] gi|120866971|emb|CAM10733.1| histidine-binding periplasmic protein [Neisseria meningitidis FAM18] gi|308389741|gb|ADO32061.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis alpha710] gi|325130652|gb|EGC53393.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis OX99.30304] gi|325132704|gb|EGC55387.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis M6190] gi|325136726|gb|EGC59326.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis M0579] gi|325138590|gb|EGC61149.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis ES14902] gi|325144831|gb|EGC67119.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis M01-240013] gi|325201717|gb|ADY97171.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis M01-240149] gi|325208539|gb|ADZ03991.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis NZ-05/33] Length = 268 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 79/224 (35%), Gaps = 10/224 (4%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 + N F + + G+ +GFDVD A++ A KI++ F AL Sbjct: 37 KVYRVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALN 93 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQA 152 + D++ T + + F + Q ++ K K ISS L + V Sbjct: 94 NGDADVVMSGVTITD--DRKQSMDFSDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVT 151 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-RP 211 G T + +++ N FE V I D+ D + + N + Sbjct: 152 GYTGDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKG 209 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + V LPD + A+ +GD +++ + + E Sbjct: 210 MDFVTLPD-FTTEHYGIAVRKGDEATVKMLNDALEKVRESGEYD 252 >gi|330824298|ref|YP_004387601.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans K601] gi|329309670|gb|AEB84085.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus denitrificans K601] Length = 251 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 77/212 (36%), Gaps = 14/212 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ G + V NG GFD++ A++ A+ +++++ ++ K L S Sbjct: 29 VLRVGTDATFPPMEFV-ENGKRTGFDIELVEAIAKAMGK---QVEWVDIDFKGLIPGLIS 84 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAG 153 ++ D+ T R + F Y G ++ + I +S L G + VQ G Sbjct: 85 RRFDMAVSAIYITDERRKV--VDFTEPYYAGGLVAMVKEGNTSIRKLSDLDGKRVSVQVG 142 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 T + L + K I E+ +E+ R DA A Y T Sbjct: 143 TKSVGFLTQ----NYPKVQRIEVEKNQEMFNLVDIGRADAAVTGKPAAYQYVRTRPG--- 195 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 +L + ++ A+ + E V+ Sbjct: 196 LRVLEEQLTTEEYGMALRKDTPELTKAVNAAL 227 >gi|294101238|ref|YP_003553096.1| extracellular solute-binding protein family 3 [Aminobacterium colombiense DSM 12261] gi|293616218|gb|ADE56372.1| extracellular solute-binding protein family 3 [Aminobacterium colombiense DSM 12261] Length = 250 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 89/257 (34%), Gaps = 17/257 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L + + +S S A L G + G + + + +GFD Sbjct: 1 MKKITGFLLLLCLFMALSS-SAYAGALDK----GTIIVGTESTYPPYEFRDEKNNLQGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ ++ + + ++++ + AL +++IDI++ T R + F Sbjct: 56 IELMNTIAEKLGKE---LEWVDMPFDSLIPALLAQKIDIVAAGMSATPERAKRVA--FST 110 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 FI+ K + S+ + +I VQ GT + + F F++ Sbjct: 111 PYEVSMSAFIVKKDNIALKSLDDMKSKTIAVQLGT-----VQETFSRTVEGAKVKTFQKF 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++ R DA DI D V I+ + A A+ + + Sbjct: 166 DDCVREVMLGRADASLMDIPVAKKFLEQKDFDGKIAVAFEQEITGAGKALAMNLEEKAFA 225 Query: 239 NIVSWTHYAMVTAEELG 255 +S M + EL Sbjct: 226 EAISSVLDEMQKSGELE 242 >gi|218548235|ref|YP_002382026.1| lysine/arginine/ornithine ABC transporter periplasmic-binding protein [Escherichia fergusonii ATCC 35469] gi|218355776|emb|CAQ88389.1| lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia fergusonii ATCC 35469] Length = 260 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ ++ +++ + L + ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSILALSL---LVGISAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E + +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L E + + + D Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKEFAFAGSSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257 >gi|119898554|ref|YP_933767.1| putative amino acid-binding protein [Azoarcus sp. BH72] gi|119670967|emb|CAL94880.1| putative amino acid-binding protein [Azoarcus sp. BH72] Length = 272 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 70/202 (34%), Gaps = 9/202 (4%) Query: 3 KDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + F + + + A +L +++K G L+ + F V + +G+D+ Sbjct: 14 RSLFGLAAGIAVASTIGLADARADVLANVQKAGTLRVAVPQDFPPFGSVGTDLKPRGYDI 73 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D ++ + ++ +P+ + R L + + D++ + RE + F Sbjct: 74 DMANLIAKELGVK---VELIPVTSTNRIPYLTTGKADLVISSLGKNPDREKV--IDFSEA 128 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G + ++ V +L G ++ V G+ +L L K FE Sbjct: 129 YAPFFNGVFGPEDVKLTKVEELDGKTVGVTRGSVEDLELTKIAS---PKVTIKRFEDNNA 185 Query: 182 IDAAYRAHRCDAYTGDISALYA 203 +AY + A Sbjct: 186 TISAYLTGQVQFVATGNVVAAA 207 >gi|300173515|ref|YP_003772681.1| amino acid ABC transporter [Leuconostoc gasicomitatum LMG 18811] gi|299887894|emb|CBL91862.1| Amino acid ABC transporter [Leuconostoc gasicomitatum LMG 18811] Length = 491 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 57/351 (16%), Positives = 122/351 (34%), Gaps = 51/351 (14%) Query: 3 KDFFVSILCLIILF-----FTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAE---VK 51 K ++ + LI+L F + A IKKRG L G++ F V Sbjct: 7 KKLVMTAMGLILLLPMFLVFVPQTQAADTDPAYAAIKKRGVLIVGLSADYAPFEFHATVG 66 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 GF+V + ++ + IQ + A+Q+ +ID++ + T RE Sbjct: 67 GRDQIVGFEVSMAKQIAKDLGVK---IQIKEMGFDGLIGAVQTGKIDVIISGINATPERE 123 Query: 112 ISLGLAFRPITYFDGQGFIMHK---KKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 + F Q ++ K + ++V SG + Q TT E + + + Sbjct: 124 KV--VDFSKSYMSPKQTILILKKNAPQFTTNVDSFSGKKVGAQRQTTQETFVQNNMPS-- 179 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLA 227 + ++V ++ + A + + A + VI P ++ Sbjct: 180 --STLVSIQKVPDLVSQLSAGKISGVVLNDPISEAYAQQ--NKALQVIYPKPNESEGAVS 235 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGI--TQKNINQVSKDTTNPDVQRFL--GIDKSS 283 A+ + + ++ + +V++ +L + N +K + G + Sbjct: 236 IAMRKNSPVLQSKINASIDGIVSSGKLKAYQKEANTLMFAKQSFWAKYGNLFIKGTLITL 295 Query: 284 NI-------GEALG-------LTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 + G LG L+ ++ I++ +GN ++ + + L Sbjct: 296 ALAAIAVVIGAVLGTVLALFKLSPNF---ILKSLGN---IYIEYV-RGTPL 339 >gi|323526705|ref|YP_004228858.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323383707|gb|ADX55798.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 260 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 64/248 (25%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ L+ S A IK G + G F +G GFD Sbjct: 1 MKSIRSILLVALLHTVAVSPVFAADEFAQIKSSGVFRIGTEGTYAPFTYHDESGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ ++ + P Q++ L + D + T R F Sbjct: 61 VEIGTQIAQRLGVKP---QFVEGKWDGLIAGLDVNRYDAVINEVAVTDAR--KQKYDFSD 115 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ I + L G + A + I + Sbjct: 116 PYITSHAALIVRSDNNTIKNFDDLKGKKSANTLTSNFGKI------AASHGAEVIPVQGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI--ISKSPLAPAIIQGDTEW 237 E A R DA D + K + D S A I +G E Sbjct: 170 NESIDLLTAGRVDATVNDSLSFLDFKKHKPDAKVKIAALDTSADSSDKSAVLIRKGSPEL 229 Query: 238 YNIVSWTH 245 ++ Sbjct: 230 VAAINKAL 237 >gi|197295420|ref|YP_002153961.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] gi|195944899|emb|CAR57508.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] Length = 268 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 86/245 (35%), Gaps = 12/245 (4%) Query: 2 YKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++L +I F + +A L I K G L+ + F V + +G+D Sbjct: 10 RRTWLAALLAAPVIALFAAAPAHADALDTIAKNGTLRVAVPEDYPPFGSVGTDMQPQGYD 69 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ A+ ++ +P+N+ R L + ++D++ + T RE + F Sbjct: 70 IDMAGLLAKALGVK---LKLVPVNSANRIPYLTTNKVDMVISSLGKTPEREKV--IDFSS 124 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 QG +S+ + L+G ++ G E+ L+ FE Sbjct: 125 AYAPYFQGVFGPSDVKVSAPADLTGKTVGATRGALEEIALSQLAP----NATIKRFEDNN 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + + A+ P + +I SP + + + Sbjct: 181 ATIQAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEVKFVIKNSPCFVGVNKNEPRLLAK 238 Query: 241 VSWTH 245 + Sbjct: 239 IDDAI 243 >gi|257482033|ref|ZP_05636074.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|298485706|ref|ZP_07003785.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159732|gb|EFI00774.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330887839|gb|EGH20500.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. mori str. 301020] gi|330988580|gb|EGH86683.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008891|gb|EGH88947.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 273 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 21/257 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I L+ L ++ + + L ++K L + F+ + + GFD Sbjct: 1 MNYRALLGI-GLVTLAASTQALAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ + ++ + S + DI + + R Sbjct: 60 VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174 + I S LSG + + + ++ E L + P+ Sbjct: 116 YYASPAVIVVNASDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFDD 175 Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 ++ R DA + L K D+ + + + + P + Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGETLYEEPNS 232 Query: 228 PAIIQGDTEWYNIVSWT 244 AI + D EW V Sbjct: 233 VAIEKDDPEWDAKVREV 249 >gi|167646870|ref|YP_001684533.1| cystine transporter subunit [Caulobacter sp. K31] gi|167349300|gb|ABZ72035.1| extracellular solute-binding protein family 3 [Caulobacter sp. K31] Length = 265 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 77/223 (34%), Gaps = 14/223 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L ++ L+ G+ F +G GF+VDF +AL++ + P + P Sbjct: 36 LKRVESSKTLRIGLEGTYPPFNFQDKDGQLAGFEVDFAKALAAQMKVKPE---FSPSPFA 92 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSG 145 AL++K+ID++ T R F G I+ + IS+ + L+G Sbjct: 93 GLLGALEAKRIDVVINQITITPERAA--KYDFSRPYTISGIQIIVRAGQTGISTPADLAG 150 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + V GT E L ++ +A R DA D Sbjct: 151 KKVGVGLGTNYESWLRKTVPTA----IVRTYDDDPTKYQDLKAGRIDAVLNDRLVAADFV 206 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 T+ + V + + A+++ D + A+ Sbjct: 207 KTSP---DFVASGPAFASQGMGVAMLR-DPALKVAIDQAIDAL 245 >gi|241206673|ref|YP_002977769.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860563|gb|ACS58230.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 265 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 93/270 (34%), Gaps = 12/270 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + + + + A L DIK G + GI + F+ A+ KG+D Sbjct: 5 MKLRY-TATAAIAVFGILAGAAQADELADIKAAGEINIGIFSDFPPFSSASADMSIKGYD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + + + + + R L ++D+L +E + + F Sbjct: 64 VDVAQKIADGLGVK---LNLVSVTGQNRIAYLNDDRVDLL---MSVGYSKERAEVIDFAA 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I +S L+ ++ V GT + +L FE Sbjct: 118 PYAPYYIAVIGPAALKVSGKEDLADKTVAVNRGTLEDTSLTAVAP---GSAAIQRFENYN 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A+ + + + D + S S +A + +G+ + Sbjct: 175 SVIQAFISGQTQLMVVGNDVGAQVLARQDELKPEQKFQLLSSPSHIA--LRKGEEGLKKV 232 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTN 270 V+ + AM++ L + K+ + + N Sbjct: 233 VNDSVAAMISDGSLDASSKSWLKAPLNPEN 262 >gi|187927127|ref|YP_001897614.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|309780170|ref|ZP_07674921.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ralstonia sp. 5_7_47FAA] gi|187724017|gb|ACD25182.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] gi|308920873|gb|EFP66519.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ralstonia sp. 5_7_47FAA] Length = 275 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 34/231 (14%), Positives = 76/231 (32%), Gaps = 10/231 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 +A L +I+K G ++ I F + + +G+D+D ++ + Sbjct: 31 LLPGRPAHADALANIQKAGVIRVAIPNDFPPFGSLGPDLKLQGYDIDMAGLIAKELGVKA 90 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 + + + R L + ++D++ + R + F + K Sbjct: 91 ELVP---VTSTNRIPFLTTGKVDVVISSLGKNAERAKV--IDFTQAYAPFPKSVYGPKDV 145 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I + L+G +I V G+T +L L+ A +E +Y + T Sbjct: 146 SIKGPADLAGKTIGVTRGSTEDLALSAVAPA---SATIKRYEDNNATAQSYLIGQVQLVT 202 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 A+ + L + +P + +G+ + V+ Sbjct: 203 VGNIVANAVNERTK--LRQLDLKFPVEDTPCYVGVAKGEPALLDKVNTVIT 251 >gi|238757577|ref|ZP_04618761.1| Arginine-binding periplasmic protein 1 [Yersinia aldovae ATCC 35236] gi|238704082|gb|EEP96615.1| Arginine-binding periplasmic protein 1 [Yersinia aldovae ATCC 35236] Length = 243 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 84/248 (33%), Gaps = 25/248 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + L ++ L+ F + AN +GFD Sbjct: 1 MKKLIIAALLATVSLSTSAAE-------------TLRFAAEATYPPFEFIDANNKMQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + ++ + +L+ K+ D + D T R + F Sbjct: 48 IDLANALCKEM---QAECTFTNQAFDSLIPSLKFKRFDAVISGMDITPERLKQVA--FTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ K ++ ++ L G + +Q G+T + L + + ++ + Sbjct: 103 PYYENSALFVAEKG-KVADLAALKGKRVGMQNGSTHQKYLMEQHPE----ITAVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + ND+ + + L A+ Q +TE Sbjct: 158 NAILDLKNGRLDAVFGDTAVVNEWLKQNDQLVAVGDKVTDANYFGTGLGIAVRQNNTELQ 217 Query: 239 NIVSWTHY 246 + Sbjct: 218 GKLDAALT 225 >gi|295106093|emb|CBL03636.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Gordonibacter pamelaeae 7-10-1-b] Length = 281 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 71/219 (32%), Gaps = 16/219 (7%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G + G + V +G + GFD++ +A+ + + ++ P++ + + S Sbjct: 45 TLTVGFDQGYPPYGYVGDDGQFTGFDLELAKAVCEKMGWE---LKLEPIDWDAKDALIGS 101 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 I+ + F ++ Q ++ K G ++ L+G ++ Q + Sbjct: 102 GTINCIWNGFTM---ENREDDYTFSEPYMYNEQVVVVKKDSGAKNLEDLAGKTVLTQVDS 158 Query: 155 TTELTLADYFKAHNMK-------YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 L + + + DA D+S A Sbjct: 159 AALHVLENDNAEEGGQAALAATFKELQTIGDYNNAFMQLESGMVDAVACDLSI--ASFQM 216 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 +P +V L + A +GDTE V+ Sbjct: 217 AAKPDAYVKLGVLAP-ENYAVGFKKGDTELAKQVTDALK 254 >gi|307547048|ref|YP_003899527.1| ABC transporter periplasmic protein [Halomonas elongata DSM 2581] gi|307219072|emb|CBV44342.1| ABC-type transport system periplasmic substrate-binding protein [Halomonas elongata DSM 2581] Length = 256 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 76/256 (29%), Gaps = 25/256 (9%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M + S + L + + L + V F + G+ Sbjct: 1 MKRQLKSVSLASCIGLGLGASGLAAAQDQTLD---------VATDPSFVPFEMMDQETGE 51 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D + +S D + ++ A+Q+ IDI T R Sbjct: 52 MTGFDMDIIKEISERAGFDYN---LRTMDFNGIIPAVQTGNIDIAIAGITITDERSKI-- 106 Query: 116 LAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F Y G +++ I +V L G + + G+T+ L + Sbjct: 107 VDFSDPYYDSGLKLLVNADDDSIQTVEDLEGKKVGTKIGSTSYDYLEENL---GDSADIT 163 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + ++ A DA D + + A+++G Sbjct: 164 PYPGSSDMYMALLGGSVDAVFYDAP-NVGYFSQTKGEGRVKTVGPLYEGQQYGLALVKG- 221 Query: 235 TEWYNIVSWTHYAMVT 250 +EW V+ AM Sbjct: 222 SEWLEPVNEALAAMKE 237 >gi|297559648|ref|YP_003678622.1| extracellular solute-binding protein family 3 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844096|gb|ADH66116.1| extracellular solute-binding protein family 3 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 283 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 77/257 (29%), Gaps = 19/257 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGLVGFAEV 50 M +IL + S + G + G+ G + Sbjct: 1 MRVRRISTILGGTAALAFALSACGTADVGGGSGGEGGGGEGGGDTITIGVKYDQPGLGLL 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + GFDVD ++ + +P +I++ + R LQ +D++ T R Sbjct: 61 DGD-APVGFDVDVATYIAGELGYEPEQIEWTEAASANRESFLQQGTVDMVIATYSITDER 119 Query: 111 EISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + F Y Q ++ I L+G +C +G+ + + D + Sbjct: 120 --RQVVDFAGPYYVAQQDILVQADNEDIQGPEDLAGKVLCSASGSRSANNIVDDM---GI 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 E + DA T D + L P + ++ + + Sbjct: 175 DAELREAGNYSECLSLLGNGTVDAVTTDNTILAGFAAQ--DPGTYRVVNNPFGEERYGVG 232 Query: 230 IIQGDTEWYNIVSWTHY 246 + G TE V+ Sbjct: 233 LPAGSTERCEEVNAAIQ 249 >gi|167838712|ref|ZP_02465571.1| lysine-arginine-ornithine transport system, binding exported protein [Burkholderia thailandensis MSMB43] Length = 256 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 84/245 (34%), Gaps = 19/245 (7%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++ L + +L ++ A I + G++ F +G GFDVD Sbjct: 1 MAALTVALLAVSAGGVQAKDWSTI------RFGVDASYPPFESKGPDGKVVGFDVDLGNE 54 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + + +K ++ + AL++++ D + + T RE + F + Sbjct: 55 ICKRV---KAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPQREEQIA--FSSKLFNTP 109 Query: 127 QGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + K + + L G ++ V+ GT E ++ +K P ++ +++ A Sbjct: 110 TRLVTKKGANLMPTAESLQGKTVGVEQGTIQETYAKVHWAPKGVKVQP--YQNQDQVYAD 167 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNI 240 A R DA D L R ++ + + + DT+ Sbjct: 168 LIAGRLDAALQDAVQADIGFLKTPRGKDYAFAGTDLDDPKTLGEGAGIGLRKEDTDLKAK 227 Query: 241 VSWTH 245 + Sbjct: 228 IDKAI 232 >gi|325524891|gb|EGD02832.1| lysine/arginine/ornithine ABC transporter periplasmic ligand-binding protein [Burkholderia sp. TJI49] Length = 260 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 89/254 (35%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ + + +L ++ S A K ++ G++ F A+G GFD Sbjct: 1 MKK--ILAAVTVALLAVSAGSAYA------KDWTTVRFGVDASYPPFESKGADGKVVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + +K ++ + AL++++ D + + T R+ + F Sbjct: 53 VDLGNEICRRM---NAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPARQEQIA--FSS 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K G+ + L G S+ V+ GT E Y+ + + + ++ Sbjct: 108 KLFNTPTRLVTKKGAGLMPTAESLKGKSVGVEQGTIQETYAKTYWASKG--VNVVPYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +++ A + R D D L R + + + + D Sbjct: 166 DQVYADLISGRLDGALQDAVQAEIGFLKTPRGANFAFAGKDLDDPKTLGEGAGIGLRKED 225 Query: 235 TEWYNIVSWTHYAM 248 T+ + M Sbjct: 226 TDLKAKIDSAIAGM 239 >gi|28868349|ref|NP_790968.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213967199|ref|ZP_03395348.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|301381065|ref|ZP_07229483.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302061560|ref|ZP_07253101.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato K40] gi|302130066|ref|ZP_07256056.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851586|gb|AAO54663.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213928041|gb|EEB61587.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] Length = 273 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 21/257 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I L+ L ++ + + L ++K L + F+ + + GFD Sbjct: 1 MNYRALLGI-GLVTLAASTQALAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ + ++ + S + DI + + R Sbjct: 60 VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174 + I S LSG + + + ++ E L + P+ Sbjct: 116 YYASPAVIVVNASDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFDD 175 Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 ++ R DA + L K D+ + + + + P + Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGETLYEEPNS 232 Query: 228 PAIIQGDTEWYNIVSWT 244 AI + D EW V Sbjct: 233 VAIEKNDPEWDAKVREV 249 >gi|282849349|ref|ZP_06258734.1| putative glutamine ABC transporter periplasmic protein [Veillonella parvula ATCC 17745] gi|282581053|gb|EFB86451.1| putative glutamine ABC transporter periplasmic protein [Veillonella parvula ATCC 17745] Length = 260 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 79/251 (31%), Gaps = 14/251 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +K L + ++ G L+ G T F + + + GFDV Sbjct: 4 FKKLTAIALVAVAAMGLLAGCGNDKPKMTQQEGVLRVGSETTFPPFEFTEGD-KYVGFDV 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + K+++ + A+QS ID+++ + T RE L F + Sbjct: 63 DLSEAIAKKLG---LKMEFKSMGFDALIPAVQSGDIDMIAAGINATPEREK--ALDFSDV 117 Query: 122 TYFD--GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + I ++ +L+G ++ Q GT + Sbjct: 118 YFDQGGFITVVRKDNTTIHNMDELAGKTVGAQIGTIPVEMAQKI-----PGTTVKQIDSN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 I +A D D A+ L + ++ + + +G+ Sbjct: 173 ANIFMELKAGTIDGAIIDN-AVAMYYLKQGADQDLKLVGEPTKAEGTVLGVKKGNKALQE 231 Query: 240 IVSWTHYAMVT 250 V+ + Sbjct: 232 AVNKALKELKE 242 >gi|227327758|ref|ZP_03831782.1| amino acid-binding protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 256 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 78/246 (31%), Gaps = 16/246 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+K TS G F A + +GFD Sbjct: 1 MFKKLLFVGALFATALSTSAFAAEPTY---------VVGSGGTYRPFEFENAQKELEGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ A + I+ + + F L S DI+ T R+ + F Sbjct: 52 IDIIKAIAKA---ENFNIKLINTPWEGIFATLNSGDRDIIISGITITDKRKQM--VDFSA 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q ++ K I S++ L + V +T ++ ++D + F+ Sbjct: 107 PYFPAEQSIVVPKGSTIDSIAALKDHKVGVVNSSTADIVVSDVLGKN--STSIKRFDNTP 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A GD+ + T+ +++ + A+ +G+ + Sbjct: 165 LMLQELYEDGVGAAVGDVGVVKFYIKTHPEKQFNLVSDAKFERQYFGIAVAKGNDQLRAK 224 Query: 241 VSWTHY 246 ++ Sbjct: 225 INSGLK 230 >gi|307730134|ref|YP_003907358.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] gi|307584669|gb|ADN58067.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] Length = 256 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 85/242 (35%), Gaps = 15/242 (6%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L + L + S + K+ ++ G++ F V +G +GFDVD AL Sbjct: 1 MLTAVALALMAT----STMATAKEWTTIRVGVDPTYPPFESVAKDGTVEGFDVDLGNALC 56 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + + +K ++ + LQS++ D++ + R + + + Sbjct: 57 AKL---KAKCVWVQSSFDGLIPGLQSRKFDVILSSMAANERRRQQIDFT-ARLYRNQTRL 112 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + S+L+G + V+ GT E + A + + ++ + A Sbjct: 113 IAKESAHLLPEASKLAGKRVAVEQGTVQETYARQKWAASG--VEVVAYPSYDQAYSDLTA 170 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSW 243 R DA D L + D++ + + A + + D + + ++ Sbjct: 171 GRVDAVLMDAVQGRLGFLNTPAGKGYAFAGDVVYDAKIMGDGDAAGVRKSDPDLRDALNG 230 Query: 244 TH 245 Sbjct: 231 AI 232 >gi|222082284|ref|YP_002541649.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726963|gb|ACM30052.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 290 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 96/238 (40%), Gaps = 9/238 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 + + + + + + S+L + G L+ + L ++ V A+G G+D+D Sbjct: 31 LLGGLAIVASVSMPASAESGSVLQSVLSNGKLRIAVLGSLPPYSTVGADGVPVGYDIDIA 90 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + L++A+ +P ++ + R +LQ+ ++D+ + + R S +AF Sbjct: 91 KKLAAALKVEPE---FVVTDIPSRVTSLQTGKVDVTIADFTRNVER--STSVAFSNPYVV 145 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++ + ++ + + A I V + T AH + F + + Sbjct: 146 TNMRLLVPESAPYKTIDEANAAKIRVAI--SRGGTAERAVPAHLPNAQIVRFNTQADELS 203 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A + + DA D Y K D + + ++++ +A + GD +W +++ Sbjct: 204 ALLSGQVDAMAEDD--FYNRKAIGDNQGKLRQVDGSLARAEIAIGVPAGDADWLRVIN 259 >gi|331018097|gb|EGH98153.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 273 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 21/257 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I L+ L ++ + + L ++K L + F+ + + GFD Sbjct: 1 MNYRALLGI-GLVTLAASTQALAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ + ++ + S + DI + + R Sbjct: 60 VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174 + I S LSG + + + ++ E L + P+ Sbjct: 116 YYASPAVIVVNASDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAENKPLQYPFDD 175 Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 ++ R DA + L K D+ + + + + P + Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGETLYEEPNS 232 Query: 228 PAIIQGDTEWYNIVSWT 244 AI + D EW V Sbjct: 233 VAIEKNDPEWDAKVREV 249 >gi|237729706|ref|ZP_04560187.1| extracellular solute-binding protein [Citrobacter sp. 30_2] gi|226908312|gb|EEH94230.1| extracellular solute-binding protein [Citrobacter sp. 30_2] Length = 306 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 92/253 (36%), Gaps = 8/253 (3%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + + + I NA+ L I+ L G L F+ NG G+ + Sbjct: 26 QWLFLLAGIGITPALMAQQNAATLDHIQSSSVLNVGYRQ-LPPFSFTDHNGKVTGYTIAV 84 Query: 64 CRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 C ++ + + + Y+P+N ERF AL S++ID+ T E + ++F Sbjct: 85 CNMIADKLRQYLKLNNLTVHYIPVNFAERFSALNSRKIDMDCGV--NTNAPERTASVSFS 142 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I +K I S+S L G ++ + + L + ++ I + Sbjct: 143 ENYYTAKMRIISLRKNNIRSISDLKGRTVSLTGSSKDLLEFNKANREQHLNISTITSTTI 202 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWY 238 + + A+ D + L +++P + + I + A + + D ++ Sbjct: 203 KGAFEKMAHNESAAFFIDDILAWPLINHSEQPELFSVSSESIGNDMHYAIMMRKNDQQFV 262 Query: 239 NIVSWTHYAMVTA 251 V T + Sbjct: 263 TFVDSTLKDFFAS 275 >gi|158423460|ref|YP_001524752.1| polar amino acid ABC transporter periplasmic substrate-binding protein [Azorhizobium caulinodans ORS 571] gi|158330349|dbj|BAF87834.1| polar amino acid uptake family ABC transporter periplasmic substrate- binding protein [Azorhizobium caulinodans ORS 571] Length = 347 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 83/235 (35%), Gaps = 8/235 (3%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + + +A +L IK++G L G+ F +G G + D ++ + Sbjct: 94 GTVAASADVLDKIKEKGVLTVGVKADYKPFGFRDPSGAIVGIEPDLAADVAKRLGVKLEL 153 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + + + R LQ +ID++ R + P + K K + Sbjct: 154 VPVV---SANRIEFLQQGKIDLMIATMSDKPERRKVVLAIDPPYYSDAVNILLSKKVKNV 210 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 + L G +C +G ++ + A F+ E+ A + C Y D Sbjct: 211 TKWEDLKGKVLCGTSGAWYNKDVSTKYGA-----EVKAFDGSEKPLFALKGGECIGYLYD 265 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + + L + +++ + + ++P A+ G+ ++ ++ T + Sbjct: 266 QTFIQGKLLDAEWTADYAMPLPGVMEAPWILAVAPGEDKFAKFMTDTTLDWMKTG 320 >gi|118590275|ref|ZP_01547678.1| putative amino-acid binding periplasmic protein [Stappia aggregata IAM 12614] gi|118437247|gb|EAV43885.1| putative amino-acid binding periplasmic protein [Stappia aggregata IAM 12614] Length = 253 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 80/234 (34%), Gaps = 15/234 (6%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 + K ++ G F + A+G GFDVD +AL + + +++ + Sbjct: 15 AEAKDWSKVRIGTEGAYPPFNSLTADGQLVGFDVDIAKALCEEMKVE---CEFVTQDWDG 71 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSG 145 ALQ+ + D + + T R+ + F Y + K + S L G Sbjct: 72 MIPALQAGKFDAVIASMSITDERKE--KVDFTNKYYNTPPAIAVPKDSTLKGTSDEDLKG 129 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ Q+ TT + + ++ +E + R DA D+ L Sbjct: 130 VTLGAQSSTTHSNYAEEKLPSA----DLKLYPTPDEYKLDVASGRVDAVIDDVVVLSDWL 185 Query: 206 LTNDRPSEH----VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 T+D + +I+ AI + D E + + ++ + Sbjct: 186 ATDDGACCKLLGTLTPDPVINGEGAGIAIRKDDGELKEMFNKAIEGILANGKYK 239 >gi|220903863|ref|YP_002479175.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868162|gb|ACL48497.1| extracellular solute-binding protein family 3 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 247 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 32/254 (12%), Positives = 79/254 (31%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ +++ ++ + + + + AN +G+ Sbjct: 1 MLRRMTLAFAGFVLMCSSAMAAE-----------KIVVASDCTWPPMEMLDANKKPEGYS 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D+ RA+ A D + F + + Q D+++ + T R+ F Sbjct: 50 SDYLRAVGKAAGLDMD---IRNVAWDGIFGGVATGQYDVVASSVTITPERQK--QFDFTE 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y Q ++ + + + S++ L G + Q GTT + ++ ++ V Sbjct: 105 PYYEVVQAVVLPEGQSVKSLADLKGKKVGGQIGTTGIFV----TRKADVGADIKEYDDVG 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA D + + K + +G + + Sbjct: 161 LAIQDLVNGRIDAVVCDDPVAMYYVNKKADTAGKLNLSYKTDEKEYYGFTVRKGRKDLLD 220 Query: 240 IVSWTHYAMVTAEE 253 ++ + + E Sbjct: 221 KLNKGIREVKASGE 234 >gi|186473374|ref|YP_001860716.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184195706|gb|ACC73670.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 289 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 84/256 (32%), Gaps = 14/256 (5%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 L L F +A+ +IK RG+L F V A+G G+D D Sbjct: 22 LRTCALALAATFGIVHVAHAASAEEIKARGYLSVATEDDYNPFEFV-ADGKNTGYDNDLL 80 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + I D ++ + + + + D+ T R+ + F T Sbjct: 81 ALVRKKIGVD---VKQQIMPWSGILPGVTTGKYDMALTAVLVTEERKKT--FDFASPTCE 135 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAH---NMKYHPIVFER 178 + K I + L G + + G+ L + K N I ++ Sbjct: 136 AVTFYATKKGSPIKTPDDLVGKVVGAETGSAMLADLKLFDEQLKKKHGGNGIKQIIEYQS 195 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E R DA +L +L RP + I + +A A+ +G+T+ Sbjct: 196 YPEAYQDLGVGRVDAVANTQISLNSL--VKTRPDVFAVGQAIGKPTYIAWAVKKGNTDVL 253 Query: 239 NIVSWTHYAMVTAEEL 254 +V + + E+ Sbjct: 254 KMVDAALLELRKSGEM 269 >gi|260167421|ref|ZP_05754232.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Brucella sp. F5/99] gi|261756833|ref|ZP_06000542.1| extracellular solute-binding protein [Brucella sp. F5/99] gi|261736817|gb|EEY24813.1| extracellular solute-binding protein [Brucella sp. F5/99] Length = 220 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 69/200 (34%), Gaps = 18/200 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + +I + + ++ ++ F V ++G +G D Sbjct: 1 MLKAIVFAGIASVIAVLPAQA---------REWKEIRIATEGAYPPFNFVASDGSLQGLD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL A+ +K + + L+S + D + + T R+ + F Sbjct: 52 VDIAKALCKAM---DAKCTIVANDWDGMIPGLKSNKFDAVIASMSVTEERKKEVA--FTD 106 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + K I+S G ++ Q TT D + ++ Sbjct: 107 KYYSTPLSVAVPKDSDITSVAPESFKGKTVGAQGSTTQGNYAEDVYGKAG--AEVKLYPT 164 Query: 179 VEEIDAAYRAHRCDAYTGDI 198 +E +A ++ R DA D Sbjct: 165 ADEANADLKSGRLDAVVSDK 184 >gi|154484327|ref|ZP_02026775.1| hypothetical protein EUBVEN_02040 [Eubacterium ventriosum ATCC 27560] gi|149734804|gb|EDM50721.1| hypothetical protein EUBVEN_02040 [Eubacterium ventriosum ATCC 27560] Length = 285 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 39/271 (14%), Positives = 86/271 (31%), Gaps = 33/271 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKR-----------------------GFLK 37 M K V + ++ + + ++ + K G L Sbjct: 1 MKKFLAVVMTAVLAMSMMTACGSSKSSEENKDTTAAKAETTKAETIDASGVTLVSDGVLT 60 Query: 38 CGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 G G F ++ +G +GFD+D ++ + K+ ++ + + K Sbjct: 61 VGAEMGYAPFETLQKDGKTPEGFDIDIITEIAKRLG---LKVNFINTSFDGILGKI-GKD 116 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGT 154 D++ R+ + F + Q ++ K I+S+ L G S+ VQ GT Sbjct: 117 YDVVCSAVTINPTRKK--AVLFSTPYITNYQTVVVKKGSDLKINSLKDLDGKSVGVQKGT 174 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T++ +++Y + +++ DA D + N E Sbjct: 175 TSDQLMSEYKSTKTINVEVAANDKLLNCFTQLTNGEIDAVVVDSTVADGFVAKNPDKYEK 234 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + AI + + + ++ Sbjct: 235 AFSDKTEPEE-FGIAIGKNNAKLQEAINKAL 264 >gi|116254865|ref|YP_770701.1| putative ABC transporter component [Rhizobium leguminosarum bv. viciae 3841] gi|115259513|emb|CAK10651.1| putative ABC transporter component [Rhizobium leguminosarum bv. viciae 3841] Length = 278 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 81/238 (34%), Gaps = 13/238 (5%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKI 78 A L +I L+C + FA + GFDVD C A++ + Sbjct: 19 LPAQADQLDNIMSAKTLRCATFADVPPFASPDLKTREMAGFDVDLCGAIAKELGVKAE-- 76 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 P++ + R ++ ++DI N +TL R + F Y + I+ Sbjct: 77 -IKPVSVEARVPEVKLGRVDITVANLAYTLSRAEQIQ--FSDPYYLAKEMLIVPADDAGK 133 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + +G I G+T+E+++ K P+ F+ A + + + Sbjct: 134 KKADYAGQRIASTKGSTSEMSI------KLNKSDPLTFQDTASAYLAVQQGKARGMVANT 187 Query: 199 SALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + ++ + + P+ + + ++ + T+ E+ Sbjct: 188 MTTTKFVNESKSKGKAMRMIEEPMLYQPIGIGMAKDQPALTAKINEILRKLDTSGEIN 245 >gi|89902914|ref|YP_525385.1| extracellular solute-binding protein [Rhodoferax ferrireducens T118] gi|89347651|gb|ABD71854.1| extracellular solute-binding protein, family 3 [Rhodoferax ferrireducens T118] Length = 247 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 24/245 (9%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + F +S + L + L+ G + V N GFD+ Sbjct: 4 RRTFLLSCFAVASLGAAHSNAQ----------DVLRVGTDATFPPMEFV-ENDKRTGFDI 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A+ A+ +I+++ ++ K L SK+ D+ T R+ + F Sbjct: 53 DLVEAMGKAMNK---RIEWVDIDFKGLIPGLVSKRFDMSVSAIYITDERKKV--VDFTDS 107 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ I ++ L+G + VQ GT + L + + + E+ + Sbjct: 108 YYAGGLVAMVKDGNTGIKTLKDLNGKKVAVQVGTKSVGYL----GTNYPQVQLVEVEKNQ 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E+ R DA A + R H +L ++ A+ + + Sbjct: 164 EMFNLVDIGRADAAVTGKP--AAFQYVRTRGGLH-VLEQQLTTEEYGMALRKDTPDLTRA 220 Query: 241 VSWTH 245 V+ Sbjct: 221 VNAAL 225 >gi|30018610|ref|NP_830241.1| cystine-binding protein [Bacillus cereus ATCC 14579] gi|229042256|ref|ZP_04190008.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus AH676] gi|229108025|ref|ZP_04237651.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus Rock1-15] gi|229125852|ref|ZP_04254877.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus BDRD-Cer4] gi|229143145|ref|ZP_04271577.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus BDRD-ST24] gi|296501182|ref|YP_003662882.1| cystine-binding protein [Bacillus thuringiensis BMB171] gi|29894151|gb|AAP07442.1| Cystine-binding protein [Bacillus cereus ATCC 14579] gi|228640226|gb|EEK96624.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus BDRD-ST24] gi|228657510|gb|EEL13323.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus BDRD-Cer4] gi|228675425|gb|EEL30643.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus Rock1-15] gi|228727047|gb|EEL78252.1| Amino acid ABC transporter, solute binding protein [Bacillus cereus AH676] gi|296322234|gb|ADH05162.1| cystine-binding protein [Bacillus thuringiensis BMB171] Length = 264 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 84/252 (33%), Gaps = 16/252 (6%) Query: 1 MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + V+ + L F + S + ++ F + +G G Sbjct: 1 MKRKLLTIVASITLCTSFILGACSKESSTTSSNSEKEFRYAMSGLYKPFNYKENDGKLVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ AL+ + + + + LQ+K+ D++ + T R ++F Sbjct: 61 FDVEIGEALAKKMNMKATPVT---NPWETLIQGLQAKKYDVILGSMAITEER--LKAVSF 115 Query: 119 RPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y G F+ K ISS L G I V +T + +A ++ Sbjct: 116 SNPYYRSGAQIFVAKKNTAISSPEDLKGKKIGVVKASTFKNLVA------KYTDQITEYD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D + L++ + S+ ++ + AI + D E Sbjct: 170 SDITALMDLEPGRVDAVITD--QMVGLRMIKEGKSKIKEAGKPLNLDEMGIAIRKDDKEM 227 Query: 238 YNIVSWTHYAMV 249 V+ ++ Sbjct: 228 VEKVNKALDEII 239 >gi|330892335|gb|EGH24996.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. mori str. 301020] Length = 254 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 81/255 (31%), Gaps = 27/255 (10%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 YK + + ++F+ +K GI F A+G GFD Sbjct: 4 YKKILLIAAATLAFSGSAFAE------------TMKMGIEGAYPPFNNKDASGQVVGFDY 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + +AL + + + + + AL +K+ D L + T R+ + F Sbjct: 52 EIGQALCARMKVECEAVT---SDWDGIIPALMAKKFDFLISSLSITEERK--QVVDFTNP 106 Query: 122 TYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 Y + FI K I + L+G S+ Q T L D + Sbjct: 107 YYSNKLQFIAPKTSSIDVSSTEKAKESLAGKSVGAQRSTLAATWLEDKLG----IMDAKL 162 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ E + R DA D + + + ++ + A+ +GD Sbjct: 163 YDTQENAFLDLSSGRVDAMLADKYVSFEWLKSKAGQNFEFKGEPVVEDDKIGIAVRKGDD 222 Query: 236 EWYNIVSWTHYAMVT 250 ++ ++ Sbjct: 223 ALRERLNAALKEIIA 237 >gi|253735261|ref|ZP_04869426.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH130] gi|253726668|gb|EES95397.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH130] Length = 485 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 39/282 (13%), Positives = 91/282 (32%), Gaps = 23/282 (8%) Query: 3 KDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51 K IL L +L T+ + IK+RG L+ G++ V Sbjct: 2 KCLIRFILVLGLLISSAMVYINPTAHAEQDQTWEKIKERGELRVGLSADYAPMEFEHTVN 61 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++ G D+D + ++ + K++ + ++ AL++ +IDI+ T R+ Sbjct: 62 GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118 Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + F ++ K + + + Q GT E + Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 R+ ++ A ++ + + + A N + + + K + A Sbjct: 173 NASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISNVKFNGEEKDTV-IA 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + + + ++ T + + N D + Sbjct: 232 VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273 >gi|222082602|ref|YP_002541967.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221727281|gb|ACM30370.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 280 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 52/222 (23%), Positives = 79/222 (35%), Gaps = 13/222 (5%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVD 62 F + L + LF T +A L IK RG L G+ F + G + KG+++D Sbjct: 10 TLFAAALSIGALFSTIAHADA-TLDRIKGRGSLTVGVILSGAPFGYIDPAGQEQKGYNID 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +AL+ + + + R LQ ++DIL N +T R L Sbjct: 69 IAKALADKLGVKLETVT---VTPPNRVQFLQQGKVDILIANMQYTEERAKILDYV-PTAY 124 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G + K G+ S L G ++CV G+ L + + A E Sbjct: 125 DRSGGAAVGRKDSGLKDWSDLKGKAVCVSQGSNYTQPLIEQYGA-----EVKALPSQPES 179 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 A + C A + A L L DRP E + Sbjct: 180 LLALQGGNCVAAV-HVGATVGLLLQ-DRPEEWKDYTILFPTE 219 >gi|319407360|emb|CBI81007.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Bartonella sp. 1-1C] Length = 250 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 80/236 (33%), Gaps = 9/236 (3%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L +F +A++ F+ + +N GFD+D AL + Sbjct: 3 LLAAAFIISATLFSQFVNAKTFTIATEGSYPPFSYIDSNNKLHGFDIDIAHALCKKM--- 59 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + L L +K+ D + + T R + F Y I+ K Sbjct: 60 KIACVITIQDFDGIILGLLAKKYDAIIASLSPTQER--LKKIDFTDAYYSTESAAIVPKD 117 Query: 135 KGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I SV G ++ VQ TT + +++ + + + +E+ ++R D Sbjct: 118 SQIKEISVEAFKGKNLGVQLNTTQAIYAENHYSSKG--VNIKFYPTTKEVIRDLLSNRLD 175 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 D + + H + ++ P+A AI Q + + N + A+ Sbjct: 176 IVILDKLQILDWFKNQGKDCCHFLGSIEGTELPVAIAIRQNNDDLKNQFNKAIKAI 231 >gi|298249930|ref|ZP_06973734.1| extracellular solute-binding protein family 3 [Ktedonobacter racemifer DSM 44963] gi|297547934|gb|EFH81801.1| extracellular solute-binding protein family 3 [Ktedonobacter racemifer DSM 44963] Length = 300 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 91/269 (33%), Gaps = 30/269 (11%) Query: 3 KDFFVSILCLIILFF--TSFSTNASI-----LGDI----------KKRGFLKCGINTGLV 45 K F + ++C+++L ++ N+S L + + G L G + Sbjct: 18 KKFIIVLMCMLLLTLIISACGGNSSTTSNEQLAKVTPNVPAPKDLQTAGTLTIGTDPTYF 77 Query: 46 GFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 V + + GFD+D +AL++ + + + + F L +K+ DI+ + Sbjct: 78 PMEYVDQTSNQYTGFDIDLSQALAAHMGVK---VNVVKTSFDTIFDDLNNKRFDIIVSSV 134 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTL--- 160 + R F + + K + V L G ++ VQ GT+ + L Sbjct: 135 YMSPKR--LPKFDFVEYMQAGSALLVQNGNPKNVKGVDDLCGLNVSVQNGTSQQEKLTTT 192 Query: 161 -ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 +V ++ A R DA S P + Sbjct: 193 SKACEAKGKSAIKVMVLGTETDVIQALVDRRVDATFQG-SLSAGYYNRL-HPEQFAYGGP 250 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 +I +P I +GD E N V A+ Sbjct: 251 VIEAAPSGIVIRKGDAEMQNAVQKAFQAL 279 >gi|254805377|ref|YP_003083598.1| histidine transport system substrate-binding protein [Neisseria meningitidis alpha14] gi|254668919|emb|CBA07124.1| histidine transport system substrate-binding protein [Neisseria meningitidis alpha14] gi|254670060|emb|CBA04906.1| glutamine transport system substrate-binding protein [Neisseria meningitidis alpha153] gi|254673285|emb|CBA08377.1| glutamine transport system substrate-binding protein [Neisseria meningitidis alpha275] gi|261392151|emb|CAX49659.1| putative amino acid-binding lipoprotein (HBP) [Neisseria meningitidis 8013] gi|325142784|gb|EGC65156.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis 961-5945] gi|325198722|gb|ADY94178.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis G2136] Length = 268 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 79/224 (35%), Gaps = 10/224 (4%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 + N F + + G+ +GFDVD A++ A KI++ F AL Sbjct: 37 KVYRVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALN 93 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQA 152 + D++ T + + F + Q ++ K K ISS L + V Sbjct: 94 NGDADVVMSGVTITD--DRKQSMDFSDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVT 151 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-RP 211 G T + +++ N FE V I D+ D + + N + Sbjct: 152 GYTGDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKG 209 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + V LPD + A+ +GD +++ + + E Sbjct: 210 MDFVTLPD-FTTEHYGIAVRKGDEATVKMLNDALEKVRESGEYD 252 >gi|315029877|gb|EFT41809.1| ABC transporter, permease protein [Enterococcus faecalis TX4000] Length = 722 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 79/236 (33%), Gaps = 14/236 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ ++++ +F + S + KK G + F + G + G D Sbjct: 1 MKRKHFLLSFFVMMVTLLTFISGTSAHAEGKK---YTIGTDLTFTPFEFQDSKGKYIGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + + PL A+QSKQID + T R+ F Sbjct: 58 VDLLDAIAKDQGFE---VDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKK--SFDFSD 112 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K I S L G ++ + GT + L Y F+ Sbjct: 113 PYFDSGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKN--KEKYDYTIKNFDDA 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + A DA D L + ++ D + S A+ +G Sbjct: 171 TGLYKALENGEADAIVDDYPV---LGYAVKNGQKLQLVGDKETGSSYGFAVKKGQN 223 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 76/241 (31%), Gaps = 13/241 (5%) Query: 18 TSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ + I K+ ++ F A GD+ G DVD + ++ + Sbjct: 257 TNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQGDYVGIDVDLVKR-AAELQG--F 313 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135 +++ + A++S Q D + T R+ F + G + K Sbjct: 314 TVEFKFIGFSSAVQAVESGQADGMVAGMTITDDRKK--AFDFSVPYFDSGIQIAVKKGND 371 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L G + V+ GT + L Y + + + +A DA Sbjct: 372 KIKSYDDLKGKKVGVKIGTESADFLEKN--KKKYDYSIKYLDTTDALYSALEIGEVDAMM 429 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254 D + + ++P I + A+ + + E + + M E Sbjct: 430 DDYPVI-GYGVAQNQPLATPIPREKGGS--YGFAVKKGQNPELLEMFNEGLKEMKRTGEY 486 Query: 255 G 255 Sbjct: 487 D 487 >gi|270262710|ref|ZP_06190981.1| hypothetical protein SOD_c03320 [Serratia odorifera 4Rx13] gi|270043394|gb|EFA16487.1| hypothetical protein SOD_c03320 [Serratia odorifera 4Rx13] Length = 262 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 37/256 (14%), Positives = 86/256 (33%), Gaps = 21/256 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ + L F++F S +K G++ G GF Sbjct: 1 MKTTMSLVLVLPLALSFSAFGGEFSG-------KVIKLGVDPTYPPLEYKTPQGTLTGFG 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A+ + +K ++ + L +K+ D ++ + T R + +AF Sbjct: 54 VDIAQAMCDQM---QAKCVWVESSWDGMIPGLLAKKFDAIASSMTITPQR--QMQIAFSN 108 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + K + + + L G S+ VQ G++ E ++ + + ++ Sbjct: 109 KVSNAPARLVARKGSDLQPTAASLKGKSVGVQQGSSQEAYATALWRTAG--VNVVSYQSQ 166 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +E + R DA + S + + ++ S + + D Sbjct: 167 QEANEDLINGRLDA-SLLASVSAGEFFHTPAGKDFAFVGAELNDSKYFGIGDGIGLRKED 225 Query: 235 TEWYNIVSWTHYAMVT 250 T + + ++ Sbjct: 226 TALRDAFNSALQTIIA 241 >gi|222151672|ref|YP_002560828.1| ABC-type amino acid transport system substrate binding component [Macrococcus caseolyticus JCSC5402] gi|222120797|dbj|BAH18132.1| ABC-type amino acid transport system substrate binding component [Macrococcus caseolyticus JCSC5402] Length = 255 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 65/237 (27%), Gaps = 17/237 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L+ + S K L G F G G+D Sbjct: 1 MKK-LFAVLTALLFVLAACGSNEEDTK---KDSKTLTVGTEGTYAPFTFHDKEGKLTGYD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A++ ++++ F L S + D ++ R F Sbjct: 57 VEVTEAVAKKAGYK---VKFVETQWDSMFSGLNSGRFDTVANQVGINEER--KDKYNFSK 111 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + ++ K I S + G + Q T+ LA A E Sbjct: 112 PYTYSEGVLVVRKNNDSIQSFDDVKGKKLA-QTLTSNYGKLAKDKGA-----EITSVEGF 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + ++R + D + ++ ++ KS + + Sbjct: 166 NQAIEMVLSNRVEGTFNDK-LSVLDYQKQKKAADIKLITGDAEKSQSGFVFTKKTDK 221 >gi|239618042|ref|YP_002941364.1| extracellular solute-binding protein family 3 [Kosmotoga olearia TBF 19.5.1] gi|239506873|gb|ACR80360.1| extracellular solute-binding protein family 3 [Kosmotoga olearia TBF 19.5.1] Length = 259 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 92/237 (38%), Gaps = 16/237 (6%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 S++ +IK+RG L+ G + G + G+ G +VD + +++ + +++++ + Sbjct: 22 GSLIDEIKERGVLRVGQDAGYMPLYGTDMYGNRIGLEVDVLKIMATLLG---VRLEFVVV 78 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM--HKKKGISSVS 141 N AL S++ DI+ T R + F GQ + K + S+ Sbjct: 79 NWDGIIPALLSEKFDIIWSGMTITDERAK--KVDFSEPYLKIGQVLVYNNRKISSVPSLE 136 Query: 142 QLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 +L+ I VQ GTT + F + F+ ++E + R D +T S Sbjct: 137 ELNNPSVRIAVQLGTTGDEAARRLFPRAK----ILTFDSMDEAAFQVASGRAD-FTVVDS 191 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 + ++ L AI + D E N ++ + ++ + + Sbjct: 192 IYAQYVAKKYD--RLSVADGFLTSEELGVAIRKNDPETLNWINNFIEGLKSSGFMEL 246 >gi|322392131|ref|ZP_08065593.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus peroris ATCC 700780] gi|321145031|gb|EFX40430.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus peroris ATCC 700780] Length = 280 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 76/223 (34%), Gaps = 8/223 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 K++ + G + V + NG + GFD+D +A+S + K+ + P++ Sbjct: 31 DNWNKYKQQYSITIGFDNTFVPMGFEEKNGQYVGFDIDLAQAVSEKLG---IKVHFQPID 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + LQ+ ID + T R +AF + Q + K + I SVS + Sbjct: 88 WDMKETELQNGTIDAIWNGYSATDER--REKVAFTIPYMQNQQVIVSKKSQNIQSVSDMK 145 Query: 145 GASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + QAG++ L + K ++ E + R DA D Sbjct: 146 DKVLGAQAGSSGYLDFEGQPELLKNIVKDQKANQYQSFNEALIDLQNDRIDALLIDRVYA 205 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 T ++ I P A + D ++ Sbjct: 206 NYYLQTEGILEQYEIFPAGFESESFAVGVRPADQTLLANLNKA 248 >gi|317053175|ref|YP_004119529.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] gi|316953502|gb|ADU72973.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 272 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 82/245 (33%), Gaps = 13/245 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 V C+ + + NA L +I K L G+N L GFD + Sbjct: 10 LVIASCIASALLGAATANARSLDEIMKSKTLIVGVNPNLPPLGVYDDKNQISGFDATVAK 69 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ ++ ++ + + + +R + S +ID + + + F + Sbjct: 70 KIADSMGVK---LELVAVGSNDRVPFIMSDKIDAVMGGMTRND--DRMKVVDFTDPVNTE 124 Query: 126 GQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G + KK L+ + GTT + D ++ + + Sbjct: 125 VLGILTTDKKPYKKWQDLNDPAVKLVQVRGTTPIKYIQDNIPKA----QLLILDNYPDAV 180 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A R DA + + L T P++ ++ D I A+ +G+T ++ Sbjct: 181 RAIAQGRADALIDVLDFM--LDYTKKYPTKWHVVDDPIEVDYDCIAVSKGNTALREKLNT 238 Query: 244 THYAM 248 A+ Sbjct: 239 EIAAL 243 >gi|148976100|ref|ZP_01812843.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrionales bacterium SWAT-3] gi|145964495|gb|EDK29749.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrionales bacterium SWAT-3] Length = 243 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 81/260 (31%), Gaps = 31/260 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L + +K + F + N +GFD Sbjct: 1 MKKILLASLIGLASFNAAAQE-------------EIKFAMEATYAPFEYMDENNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + AL+ K+ D D T R + F Sbjct: 48 VDLANALCEEM---KATCTFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LQQVNFSD 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI + ++ + L G I VQ G+T + L + + + + Sbjct: 103 AYYDNSAAFISI-EGKVADQAALEGKRIGVQNGSTHQSYLLEQLP----GVTAVPYSSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + + R D+ GD + + D + + ++ A+ + + Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEWFKKEDN---LTYVGEQVTNQEYFGNGFGIAVNKSNP 214 Query: 236 EWYNIVSWTHYAMVTAEELG 255 E ++ A+ E Sbjct: 215 ELVAQLNTALAAVKANGEYD 234 >gi|153831543|ref|ZP_01984210.1| cyclohexadienyl dehydratase [Vibrio harveyi HY01] gi|148872053|gb|EDL70870.1| cyclohexadienyl dehydratase [Vibrio harveyi HY01] Length = 254 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 91/248 (36%), Gaps = 10/248 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + S A L DI+K G L+ G F+ ++ G+D Sbjct: 1 MNK---TTLLLASVALTLSGVAQADKLEDIQKSGTLRVGTTGDYKPFSYYDGK-NYSGYD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + +++ + + ++ + + K L + DI + R+++ Sbjct: 57 IDVAKHVAAELGVE---LEIVRTSWKALLTDLNQDKYDIAMGGITRKMQRQLNAEQTQGY 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 +T+ K + +++ +++ S+ V + A+ K FE Sbjct: 114 MTFGKCFLVAKGKAEQYNTLDKVNQPSVRVGVNIGGTN--EAFADANLQKASFTRFENNL 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ A + D + ++T++R E D +K I +G+ N Sbjct: 172 DVPKAVATGKVDVMVTETPEGLFYQVTDER-LEAARCEDPFTKGQFGYLIPKGEQRLLNT 230 Query: 241 VSWTHYAM 248 V++ M Sbjct: 231 VNFIMDEM 238 >gi|304386971|ref|ZP_07369229.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Neisseria meningitidis ATCC 13091] gi|304338928|gb|EFM05024.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Neisseria meningitidis ATCC 13091] Length = 268 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 79/224 (35%), Gaps = 10/224 (4%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 + N F + + G+ +GFDVD A++ A KI++ F AL Sbjct: 37 KVYRVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALN 93 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQA 152 + D++ T + + F + Q ++ K K ISS L + V Sbjct: 94 NGDADVVMSGVTITD--DRKQSMDFSDPYFEITQVVLVPKGKKISSSEDLKNMNKVGVVT 151 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-RP 211 G T + +++ N FE V I D+ D + + N + Sbjct: 152 GYTGDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKG 209 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + V LPD + A+ +GD +++ + + E Sbjct: 210 MDFVTLPD-FTTEHYGIAVRKGDEATVKMLNDALEKVRESGEYD 252 >gi|296113904|ref|YP_003627842.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis RH4] gi|295921598|gb|ADG61949.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis RH4] gi|326560581|gb|EGE10962.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis 103P14B1] gi|326562225|gb|EGE12553.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis 7169] gi|326565593|gb|EGE15756.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis 12P80B1] gi|326567179|gb|EGE17301.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis BC1] gi|326568461|gb|EGE18541.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis BC7] gi|326572015|gb|EGE22017.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis BC8] gi|326573962|gb|EGE23912.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis O35E] gi|326574953|gb|EGE24883.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis 101P30B1] gi|326576283|gb|EGE26198.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis CO72] Length = 265 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 85/251 (33%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGF 59 M F ++ I+ F+ + + K G L+ F +G GF Sbjct: 1 MKFKTF-GLMAAIVGTFSISACSGQNEQSTKASGDTLRIATEGTYAPFNYTNPDGSLGGF 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD AL + + ++ Q + + AL++ + D + T R S + F Sbjct: 60 DVDIANALCNKM---QTECQIIAQDWDGIIPALKTGKFDAIVAAMSVTPER--SEQVDFS 114 Query: 120 PITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + + F+ K S ++ A I Q T + L + P +++ Sbjct: 115 EPYFVNSLVFLAKKGSNFDPSSTDAINNAKIVAQRSTISSQWLTQTYP----NSKPQLYD 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 ++ R DA D ++ + + DI ++ A+ +G+T Sbjct: 171 TLDNAFIDLGNERADAMISDKLPALTWLSSDLGQNFEIKGGDININDKVSIAVDKGNTAL 230 Query: 238 YNIVSWTHYAM 248 + A+ Sbjct: 231 LQKFNEALAAI 241 >gi|207724232|ref|YP_002254629.1| substrate-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|206589448|emb|CAQ36409.1| substrate-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] Length = 254 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 76/218 (34%), Gaps = 13/218 (5%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +I++ G L F + GF+++ +A+ + I++ L+ Sbjct: 26 EEIQQSGKLIVATGGEFPPFNYFAGS-KLTGFEIEVAQAVVKKMG---LAIEWKTLSFDS 81 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 LQ + D++ + T R + F Y G + I + + L+G Sbjct: 82 LLAGLQQNRWDLVISSHGVTEERAK--AVDFTTPHYCSGSSIVAR-DPAIRTAADLTGKV 138 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + VQ G+T + K F + + A + R DA+ D AL Sbjct: 139 VAVQTGSTYLENVHKLAKPR----EIKNFPQDRDARTALSSGRADAWVTDK--FVALAAI 192 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 P ++ L + +A A+ +G+T + Sbjct: 193 QSNPEANLKLGSPLFVERIAAAVAKGNTALATRYNKAL 230 >gi|254471178|ref|ZP_05084580.1| cystine ABC transporter, cystine-binding protein [Pseudovibrio sp. JE062] gi|211959324|gb|EEA94522.1| cystine ABC transporter, cystine-binding protein [Pseudovibrio sp. JE062] Length = 280 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 90/267 (33%), Gaps = 21/267 (7%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 SI+ L +L + + ++ + + ++ N+G + + A+G ++G+D+D + Sbjct: 10 IGSIVGLSLLAVSQPVFSGEVMDRVMETKVIRVATNSGYPPASYLNADGVFEGYDIDVSK 69 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + +L + + ++ + T R L F + Y+ Sbjct: 70 EVAKRMGAKAE---FLNPAWEAITSGKWGGRWEMSIGSMTPTPARAKV--LDFPAVYYYT 124 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY----------FKAHNMKYHPIV 175 F +HK ++ +L+G I G+T E L F+ Sbjct: 125 PAAFYVHKDSSYETLIELNGKRIGASTGSTFEYYLQHELELDPVYSPAFEFAVTPGEVRT 184 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +E + R I+++ + IL + + PLA + D Sbjct: 185 YEADSNVLDDLRLGDGKRLDAGITSVPTILEAIKASYPIRILGEAVFFEPLAVVTSRDDP 244 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNIN 262 E+ V EE+ + Sbjct: 245 EFSKKVGEII------EEMRADGTLVE 265 >gi|156976754|ref|YP_001447660.1| ABC amino acid transporter periplasmic ligand binding protein [Vibrio harveyi ATCC BAA-1116] gi|156528348|gb|ABU73433.1| hypothetical protein VIBHAR_05529 [Vibrio harveyi ATCC BAA-1116] Length = 247 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 85/258 (32%), Gaps = 21/258 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L + + +K + F + N +GFD Sbjct: 1 MKKILLASLIGLSSATMAANAAAQE---------EIKFAMEATYAPFEYMDENNQIQGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + ++ + + AL+ K+ D D T R + F Sbjct: 52 VDLANALCKEM---EAQCTFHNQSFDSLIPALKFKRYDAAISAMDITDAR--LEQVNFSA 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ K+ ++ L G + VQ G+T + L + + + + Sbjct: 107 PYYDNSAAFVSIKE-KVADQKALEGKRVGVQNGSTHQSYLIEQMP----GVTAVPYSSYQ 161 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238 + + R D+ GD + + + + + + A+ +G+ E Sbjct: 162 DAFIDMKNGRIDSVFGDTAVVAEWFKKENNLAYVGEHVTNPKYFGNGFGIAVNKGNDELV 221 Query: 239 NIVSWTHYAMVTAEELGI 256 N ++ + E + Sbjct: 222 NKLNTALKTVKANGEYDV 239 >gi|78059833|ref|YP_366408.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77964383|gb|ABB05764.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 274 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 36/253 (14%), Positives = 78/253 (30%), Gaps = 15/253 (5%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 + L + +A L I K G ++ G+ F + + G+D+D Sbjct: 20 LLCACAGTAGLAAFAPLAHADALDTIAKSGVVRIGVFEDYPPFGSIGPDMKPLGYDIDMA 79 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + A+ +K++ + + R L ++ D+L E + + F Sbjct: 80 NLIGKAL---NAKVELVQVTGDNRMAYLADRKTDML---LSVGQTPERAKVIDFSNAYAP 133 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 K + + L+G S+ V GT +L+++ F+ A Sbjct: 134 YYLAVFGPKSLAVKGNADLAGKSVAVARGTLEDLSVSKVAP---PSATIKRFDDPNGAIA 190 Query: 185 AYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A+ + + + + P + L SP + + + V+ Sbjct: 191 AFLSGQAQLLVVGNDVGATIIARHPSIDPEQKFSL----FSSPDHVGLNKNEPRLMQKVN 246 Query: 243 WTHYAMVTAEELG 255 + L Sbjct: 247 DAIAGARKSGTLN 259 >gi|57237036|ref|YP_178838.1| CjaC [Campylobacter jejuni RM1221] gi|86151588|ref|ZP_01069802.1| cjaC protein [Campylobacter jejuni subsp. jejuni 260.94] gi|157415021|ref|YP_001482277.1| CjaC [Campylobacter jejuni subsp. jejuni 81116] gi|57165840|gb|AAW34619.1| CjaC [Campylobacter jejuni RM1221] gi|85841217|gb|EAQ58465.1| cjaC protein [Campylobacter jejuni subsp. jejuni 260.94] gi|157385985|gb|ABV52300.1| CjaC [Campylobacter jejuni subsp. jejuni 81116] gi|307747659|gb|ADN90929.1| Histidine-binding protein [Campylobacter jejuni subsp. jejuni M1] gi|315058196|gb|ADT72525.1| Histidine-binding protein precursor [Campylobacter jejuni subsp. jejuni S3] gi|315931938|gb|EFV10893.1| CjaC protein [Campylobacter jejuni subsp. jejuni 327] Length = 251 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 76/237 (32%), Gaps = 16/237 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++++ L+ LF + S + + + LK G F N GFD Sbjct: 1 MKKILSIALVALVGLFLGACSDSKN--KESNASVELKVGTAPNYKPFNYK-ENSKLTGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR- 119 D ++ + KI ++ N AL++ +ID+++ T R + F Sbjct: 58 TDLVEEIAKK---NGIKIVWVETNFDGLIPALKAGKIDMIASAMSATDER--RQSVDFTK 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 P + + + + L G I VQ GT L + + + Sbjct: 113 PYYMSKNLYLKLKNNDSLQTKNDLEGKKIGVQLGT-----LQENTAKAIKNAQVQSNKDL 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 A + ++ DA D + P + + A + + Sbjct: 168 NIAVLALKNNKIDAIVADQDTAKGFLA--ENPELVSFYQETDGGEGFSFAFDKNKQK 222 >gi|319899028|ref|YP_004159121.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella clarridgeiae 73] gi|319402992|emb|CBI76547.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella clarridgeiae 73] Length = 250 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 84/250 (33%), Gaps = 21/250 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++I +I + NA LK F+ + +N GFD Sbjct: 1 MK---LLAIALIISATLFAQLVNAKT---------LKIATEGSYPPFSYIDSNNKLHGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + L L +++ D + + T R + F Sbjct: 49 IDITYALCKKMKVE---CVITLQDFDGIILGLLAQKYDAIIASLSPTQER--LKKIDFTD 103 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y I+ K I SV G ++ VQ+ TT + +++ + + ++ Sbjct: 104 AYYNTELAAIVPKDSKIKEISVEAFKGKNLGVQSNTTQAIYAENHYASKG--VNIKLYPT 161 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E+ + R D D + + + ++ P+A AI + + Sbjct: 162 SKEVTRDLLSKRLDIVILDKLQILDWFKNKGKGCCRFLGSIEGTQLPIAIAIRKNNDILK 221 Query: 239 NIVSWTHYAM 248 N + A+ Sbjct: 222 NQFNEAIKAI 231 >gi|296158456|ref|ZP_06841287.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295891400|gb|EFG71187.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 260 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 68/251 (27%), Gaps = 14/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ L S + A L IK G + G F +G GFD Sbjct: 1 MKSIRSILLIALFQAVAVSSAFAADELAQIKSAGVFRIGTEGTYAPFTYHDESGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A++ + P Q++ L + D + T R++ F Sbjct: 61 VEIGTAIAQRLGVKP---QFVEGKWDGLIAGLDVNRYDAVINEVAITDARKV--KYDFSD 115 Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I + L G + A I + Sbjct: 116 PYITSHAALIVQSNNTTIKNFDDLKGKKSANTLTSNFGKIAAA------HGAEVIPVQGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD--IISKSPLAPAIIQGDTEW 237 E + R DA D + K + D S A I +G+ E Sbjct: 170 NESIDLLTSGRVDATVNDSLSFLDFKKHKPDAKVKIAALDTSTDSSDKSAVLIRKGNPEL 229 Query: 238 YNIVSWTHYAM 248 ++ + Sbjct: 230 QAAINKALAGI 240 >gi|325205656|gb|ADZ01109.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis M04-240196] Length = 268 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 79/224 (35%), Gaps = 10/224 (4%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 + N F + + G+ +GFDVD A++ A KI++ F AL Sbjct: 37 KVYRVAANAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALN 93 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQA 152 + D++ T + + F + Q ++ K K ISS L + V Sbjct: 94 NGDADVVMSGVTITD--DRKQSMDFSDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVT 151 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-RP 211 G T + +++ N FE V I D+ D + + N + Sbjct: 152 GYTGDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKG 209 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + V LPD + A+ +GD +++ + + E Sbjct: 210 MDFVTLPD-FTTEHYGIAVRKGDEATVKMLNDALEKVRESGEYD 252 >gi|118475359|ref|YP_892389.1| arginine-binding periplasmic protein 1 [Campylobacter fetus subsp. fetus 82-40] gi|118414585|gb|ABK83005.1| arginine-binding periplasmic protein 1 [Campylobacter fetus subsp. fetus 82-40] Length = 242 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 88/258 (34%), Gaps = 29/258 (11%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K FF I+ I S + + ++ G N F + GFD+D Sbjct: 2 KCFFKFIVVACIAAGFSHAAD-----------VIRVGTNATYPPFEFIDEQNKIAGFDMD 50 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 ALS + + + + ++ AL++ +ID ++ T + ++F Sbjct: 51 LIDALSKKVGFEY---KIVNMSFDALIPALKAGKIDAVAAAMSATP--DRIKAVSFTKPY 105 Query: 123 YFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y FI K ++S L G I VQ GT E+ + E + Sbjct: 106 YNTENLFIKQAKNGDLTSKQNLDGKKIAVQLGTVQEIAARAM-----KGVKVMANEDIFA 160 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + + DA D S Y N +E L + +I + ++V Sbjct: 161 AIMALKNGKVDAVLVDSSIGYGYLNKNKDLAEF--LKEPDGSE--GFSIAFDKNKHTDLV 216 Query: 242 SWTHYAMVTAEELGITQK 259 + + A+ EEL Sbjct: 217 AKINQAV---EELKSDGT 231 >gi|313123999|ref|YP_004034258.1| ABC amino acid transporter permease/periplasmic component [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280562|gb|ADQ61281.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 500 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 43/264 (16%), Positives = 89/264 (33%), Gaps = 26/264 (9%) Query: 1 MYK--DFFVSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K ++L L LF + + +++ IKK G L G++ Sbjct: 1 MKKLIKIMTALLLLAGLFTAAIPAVDAASSKKMASGTVMKKIKKSGKLVVGMSADYPPLE 60 Query: 49 E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 V + G DV+ + ++ + ++ ++ +AL++ +ID++ Sbjct: 61 FTKNVNGRNKYVGVDVELAKQIAKDLGVK---LEIKNMDFDSLLVALETGKIDVIISGMT 117 Query: 106 WTLLREISLGLAFRPITY---FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 T R+ + F I Y D K +S + G ++ Q G+ +L Sbjct: 118 PTAERKK--SIDFSKIYYAEKSDYFVISKTNKAKYTSTASFKGKTVGAQTGSLQYTSLKK 175 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 +K + + A ++ + DA TND V + Sbjct: 176 NAAESGIKVKGLAKISN--LLMALKSGKVDAVLLGE-LNAKTYATNDTSLSLVKSSLSQA 232 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHY 246 + A + +G + ++ T Sbjct: 233 QMGNAVGVAKGQGDLVKAINKTIN 256 >gi|121612379|ref|YP_001000430.1| cjaC protein [Campylobacter jejuni subsp. jejuni 81-176] gi|167005371|ref|ZP_02271129.1| cjaC protein [Campylobacter jejuni subsp. jejuni 81-176] gi|87249414|gb|EAQ72374.1| cjaC protein [Campylobacter jejuni subsp. jejuni 81-176] Length = 251 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 76/237 (32%), Gaps = 16/237 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++++ L+ LF + S + + + LK G F N GFD Sbjct: 1 MKKILSIALVALVGLFLGACSDSKN--KESNASVELKVGTAPNYKPFNYK-ENSKLTGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR- 119 D ++ + KI ++ N AL++ +ID+++ T R + F Sbjct: 58 TDLVEEIAKK---NGIKIVWVETNFDGLIPALKAGKIDMIASAMSATDER--RQSVDFTK 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 P + + + + L G I VQ GT L + + + Sbjct: 113 PYYMSKNLYLKLKNNDSLQTKNDLEGKKIGVQLGT-----LQENTAKAIKNAQVQSNKDL 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 A + ++ DA D + P + + A + + Sbjct: 168 NIAVLALKNNKIDAIVADQDTAKGFLA--ENPELVSFYQETDGGEGFSFAFDKNKQK 222 >gi|330811274|ref|YP_004355736.1| Putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379382|gb|AEA70732.1| Putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 257 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 81/257 (31%), Gaps = 28/257 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L +L +F+ LK GI FA +G GFD Sbjct: 1 MKKLVLLGALALSVLSLPTFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + K ++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCEEM---KVKCVWVEQEFDGLIPALKVRKIDAILSSMSITEDRKK--SVDFTN 105 Query: 121 ITYFDGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M +S +++L G +I VQ G+ E + + Sbjct: 106 KYYNTPARLVMKAGTQVSDGLAELKGKNIGVQRGSIHERFAREVLAPLG--AEIKPYGSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 EI A R D D + L L D + + A+ +GD Sbjct: 164 NEIYLDVSAGRLDGTVADATLLDDGFLKTDAGKGFAFVGPAFTDVKYFGDGVGIAVRKGD 223 Query: 235 TEWYNIVSWTHYAMVTA 251 + + A Sbjct: 224 -----ALKDKINGAIAA 235 >gi|319782304|ref|YP_004141780.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168192|gb|ADV11730.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 265 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 80/259 (30%), Gaps = 34/259 (13%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + CL ++ + G L G ++ A+G+ GFD Sbjct: 1 MKLKVLTLLACLAGSMGSALAAE----------GELSIGTEGAYPPWSMSDASGNVTGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D L + + ++ AL++K+ D++ T R+ + F Sbjct: 51 ADVGALLCTKL---AVTCHFVVQAFDGLIPALKAKRFDVIISGMSITADRKK--EINFSV 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-------LSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F+ K +++++ L G + VQAGTT L Sbjct: 106 GYAELANMFVAAKGSDLAAITDVDTLLKSLDGKKVGVQAGTTHAHFLEKRAP----NADL 161 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-------DIISKSPL 226 ++ ++++ + R D D SAL ++ D + Sbjct: 162 KTYDTLDQMQIDLASGRIDTAFADQSALQDFLDK-PDGKNFQLVGVEIKSTYDPTLGEGI 220 Query: 227 APAIIQGDTEWYNIVSWTH 245 I Q +TE + Sbjct: 221 GVGIAQDNTELKAKIDKAL 239 >gi|90961050|ref|YP_534966.1| glutamine-binding protein / glutamine transport system permease protein [Lactobacillus salivarius UCC118] gi|90820244|gb|ABD98883.1| Glutamine-binding protein / Glutamine transport system permease protein [Lactobacillus salivarius UCC118] Length = 485 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 89/281 (31%), Gaps = 30/281 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ I+ + + N + + G + F N + G D Sbjct: 1 MLKKAFIFIVSCLCTLLIFTNLNNNHVNA--DTKTYNIGTDVTYPPFEFANKNNQYVGID 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + K+ P+ +LQS QID + T R+ F Sbjct: 59 IDLMKAIAKE---EGFKVNIQPIGFNSAVQSLQSGQIDGVIAGMAITDERK--QKFDFSK 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + K I+S+ QL G + ++ GT + K + F+ + Sbjct: 114 PYYKTGFIMTVAKNSNITSLKQLRGKRVALKTGTAAANYALSLKDKYGFKT--VTFDDSD 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---- 236 + A D+ + T + I+ A+++G + Sbjct: 172 NMYNDVVNGNSVACFEDMPVMQYAIQTGTK---LKIVTKPAQSGYYGFAVMKGKNQELLH 228 Query: 237 --------------WYNIVSWTHYAMVTAEELGITQKNINQ 263 + IV+ AE+ + + N+ Sbjct: 229 KFDDGLAKLKKNGGYDKIVNRYINQNTIAEQKKANENSNNE 269 >gi|300697047|ref|YP_003747708.1| substrate-binding periplasmic (Pbp) abc transporter protein [Ralstonia solanacearum CFBP2957] gi|299073771|emb|CBJ53292.1| putative substrate-binding periplasmic (Pbp) abc transporter protein [Ralstonia solanacearum CFBP2957] Length = 254 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 76/218 (34%), Gaps = 13/218 (5%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +I++ G L F + GF+++ +A+ + I++ L+ Sbjct: 26 EEIQQSGKLIVATGGEFPPFNYFAGS-KLTGFEIEVAQAVVKKMG---LAIEWKTLSFDS 81 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 LQ + D++ + T R + F Y G + I + + L+G Sbjct: 82 LLAGLQQNRWDLVISSHGVTEERAK--AVDFTTPHYCSGSSIVAR-DPAIRTAADLTGKV 138 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + VQ G+T + K F + + A + R DA+ D AL Sbjct: 139 VAVQTGSTYLENVRKLAKPR----EIKNFPQDRDARTALSSGRADAWVTDK--FVALAAI 192 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 P ++ L + +A A+ +G+T + Sbjct: 193 QSNPEANLKLGSPLFVERIAAAVAKGNTALAARYNKAL 230 >gi|325204584|gb|ADZ00038.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis M01-240355] Length = 268 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 79/224 (35%), Gaps = 10/224 (4%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 + N F + + G+ +GFDVD A++ A KI++ F AL Sbjct: 37 KVYRVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALN 93 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQA 152 + D++ T + + F + Q ++ K K ISS L + V Sbjct: 94 NGDADVVMSGVTITD--DRKQSMDFSDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVT 151 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-RP 211 G T + +++ N FE V I D+ D + + N + Sbjct: 152 GYTGDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKG 209 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + V LPD + A+ +GD +++ + + E Sbjct: 210 MDFVTLPD-FTTEHYGIAVRKGDEATVKMLNDALEKVRESGEYD 252 >gi|292669508|ref|ZP_06602934.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas noxia ATCC 43541] gi|292648871|gb|EFF66843.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas noxia ATCC 43541] Length = 265 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 88/323 (27%), Gaps = 71/323 (21%) Query: 2 YKDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59 + ++I + + T + G + F ++ GF Sbjct: 11 KRCLLGLTIFAVAVFGLAGCGTGEKT-----ASNVWRVGTDASYAPFGFQDEKSHEYVGF 65 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D RA++ + + LN ALQ+ +DI + R + + F Sbjct: 66 DIDIIRAIAETQGHE---VAIKNLNFDGLIPALQTGDLDIAISDMTINEERAKT--VDFT 120 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ I+S L G I V G+T A F Sbjct: 121 DSYYKAGLSMVVRADETRINSFDDLEGLRIGVTIGSTGAEAARGIPNA-----DLHEFST 175 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + DA D + ++P I++ L A+ +G+ E Sbjct: 176 ISDAFLDLYNGGVDAVVNDTPVDEYYVENKGKGIA-KVVPAQINQEDLGIAVKKGNAE-- 232 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 LG + + Sbjct: 233 -------------------------------------LLGQLNAG-------------LK 242 Query: 299 IIRHMGNYGEMFDRNLGNQSELK 321 I+ G Y E++ + G + K Sbjct: 243 TIKENGKYAEIYRKWFGKEPPAK 265 >gi|259909461|ref|YP_002649817.1| Putative amino-acid ABC transporter, periplasmic amino acid-binding protein [Erwinia pyrifoliae Ep1/96] gi|224965083|emb|CAX56615.1| Putative amino-acid ABC transporter, periplasmic amino acid-binding protein [Erwinia pyrifoliae Ep1/96] gi|283479534|emb|CAY75450.1| putative ABC transport system, periplasmic component [Erwinia pyrifoliae DSM 12163] Length = 257 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 72/245 (29%), Gaps = 14/245 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K +L ++ F S A L ++ G LK G F+ +G GFDV Sbjct: 2 KSIATLLLAGMVQFGLSSQAMAETELSKVQSAGALKIGTEGTYPPFSYHDTSGKLTGFDV 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + R ++ + ++ L +++ D + T R F Sbjct: 62 EIGREVAKRLNVKAE---FVEAKWDGLIAGLDARRYDAVINQVAITAPR--QQKYDFSVP 116 Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I+ I S L G T+ LA + A + + Sbjct: 117 YISSRAVLIVRSNNSAIKSFDDLKGKKSA-HTLTSNFAQLATRYGA-----QVVGTDGFN 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + R DA D + K + I + + + +G+TE Sbjct: 171 QSVDLVASGRADATINDNLSYLDFKKHRPD-VKVKIAATLPAAEDEGILLRKGNTELKAA 229 Query: 241 VSWTH 245 + Sbjct: 230 IDKAI 234 >gi|1166636|gb|AAA85769.1| histidine-binding periplasmic protein HisJ [Escherichia coli] Length = 260 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 97/261 (37%), Gaps = 22/261 (8%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 +FS+ + L I + ++ G + F + G+ GFD+D + L I ++ Sbjct: 13 AFSSATAALAAIPQN--IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQC 67 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ +L++K+ID + + T R +AF Y ++ K I Sbjct: 68 TFVENPLDALIPSLKAKKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQ 125 Query: 139 -SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +V L G + V GTT E +++ + + ++ + I + A R DA D Sbjct: 126 PTVESLKGKRVGVLQGTTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQD 183 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAE 252 A L ++ + L + + D E ++ +A + A+ Sbjct: 184 EVAAGEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD 242 Query: 253 ELGITQKNINQVSKDTTNPDV 273 +++K + DV Sbjct: 243 ------GTYEKLAKKYFDFDV 257 >gi|238762101|ref|ZP_04623074.1| Arginine-binding periplasmic protein 2 [Yersinia kristensenii ATCC 33638] gi|238699829|gb|EEP92573.1| Arginine-binding periplasmic protein 2 [Yersinia kristensenii ATCC 33638] Length = 243 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 83/250 (33%), Gaps = 25/250 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L + F++ + ++ + F + AN + GFD Sbjct: 1 MKKLLLATM--LSGMVFSATAAE-----------TIRFAASATYPPFESIGANNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + AL+ K+ D + D T R + F Sbjct: 48 MDLAKALCKQM---EANCTFTNQAFDSLIPALKFKRYDAVISGMDITPERSKQVA--FTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K ++ + L G I ++ GTT + L D + ++ + Sbjct: 103 PYYANSAIVIAPKG-KFTAFADLKGKKIGMENGTTHQKYLQDKHPE----IQTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + TN + + L A+ +T Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWLKTNPNLASVGEHVTDPQYFGTGLGIAVRPDNTALL 217 Query: 239 NIVSWTHYAM 248 ++ A+ Sbjct: 218 EKLNKAIEAV 227 >gi|227329294|ref|ZP_03833318.1| arginine-binding periplasmic protein 2 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 243 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 78/252 (30%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L I T+ ++ + F + A+ + GFD Sbjct: 1 MKKLVLATLLAGIAFSATAA-------------DTIRFASSATYPPFESLDASNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + AL+ ++ D + D T R + F Sbjct: 48 MDLAKALCKQM---QATCTFTNQAFDSLIPALKFRRYDAVISGMDITPERSKQVA--FTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K S + + G I ++ GTT + + D + ++ + Sbjct: 103 PYYANSAVVIAQKG-KFSDFAAMKGKRIGMENGTTHQKYMHDKHPE----VQTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P + + L A+ D Sbjct: 158 NAVLDLKNGRIDGVFGDTAVVNEWI--KTNPELATVGEHVTDAEYFGTGLGIAVRPDDKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNKALDAI 227 >gi|157164376|ref|YP_001467257.1| homoserine kinase (HSK; HK) [Campylobacter concisus 13826] gi|112801978|gb|EAT99322.1| arginine-binding periplasmic protein 1 [Campylobacter concisus 13826] Length = 256 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 79/267 (29%), Gaps = 19/267 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDI-KKRGFL--KCGINTGLVGFAEVKANGDW 56 M V L L++ F + + + + + K G + F + Sbjct: 1 MKNLLKVLALGLVMFFIGCGDDSGKKTVANAPEASKEVVYKVGSSADYPPFEYLDDKNQI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GF++D ++ ++ AL++ +IDI T R + Sbjct: 61 VGFEIDLLNEITKKTGIKFDVAN---MSFDGLIPALKTGKIDIAISGMSATDERRK--SV 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F YF FI K ++ + L I Q GT E A + I Sbjct: 116 DFTKPYYFSENLFIRKKGSDVNKDN-LKDKKISAQVGTLQEE------AAKKITTQSIPA 168 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD-T 235 E V + A + D D N E + LPD A A +G T Sbjct: 169 ENVAAAIMSLNAGKIDVVLTDSPIGVEFLKQNPDLEEFLRLPD--GTEGFAMAFDKGKHT 226 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNIN 262 + + + + E + Sbjct: 227 DLIKKIDAAIEELQKSGEFDKMLAKYD 253 >gi|325678864|ref|ZP_08158462.1| ABC transporter, substrate-binding protein, family 3 [Ruminococcus albus 8] gi|324109368|gb|EGC03586.1| ABC transporter, substrate-binding protein, family 3 [Ruminococcus albus 8] Length = 283 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 80/253 (31%), Gaps = 18/253 (7%) Query: 3 KDFFVSIL--CLIILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKANGDWKG 58 K ++L ++ F+ G G + + NG++ G Sbjct: 4 KRVMAAVLGMAVVAAAFSGCGAKGEKGEKKSADGKKTFTVGFDAEFPPYGFKDDNGEYVG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+ + +D ++ P++ + + L S ID + + + Sbjct: 64 FDLSLAEEVCKR--NDWELVK-QPIDWDSKDMELSSGSIDCIWNGFTINGREDS---YTW 117 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL--ADYFKAHN----MKYH 172 + Q ++ GIS + L+G + VQA ++ L D + Sbjct: 118 STPYIDNSQVVVVKADGGISDLKGLAGKVVIVQADSSALHALDGEDASDENKALAATFAD 177 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + DA D A + R +VIL + +S ++ Sbjct: 178 LQQVGDYNTAFLNLESGAADAICMDY--GVAAYEVSSRGDAYVILDENVSTERYGVGFLK 235 Query: 233 GDTEWYNIVSWTH 245 G+TE + V T Sbjct: 236 GNTELRDKVQDTL 248 >gi|293395142|ref|ZP_06639428.1| histidine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] gi|291422319|gb|EFE95562.1| histidine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] Length = 260 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 91/279 (32%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F V L + + +S LK G + F A G+ GFD Sbjct: 1 MKKRFLVVPLVMALAAASSAFAAIPT--------TLKIGTDPTYAPFESKNAKGELVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L I ++ ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLATELCKRI---NTQCTFVESDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFTD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G S+ V GTT E ++ + ++ Sbjct: 108 KLYAANARLIAPKGAKILPSVDSLKGKSVGVLQGTTQEAYANANWQPKG--VTVVPYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + A + R DA D A L ++ + + + + D Sbjct: 166 DLVYADLASGRIDAAFQDEVAGSDGFLKQPPGKDYAFAGEAVKDDKFFGVGTGMGLRKTD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE A+ A ++ +K + DV Sbjct: 226 TELKA-------ALDKAFAEMRKDGTYDKFAKKYFDFDV 257 >gi|171321439|ref|ZP_02910387.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia ambifaria MEX-5] gi|171093285|gb|EDT38485.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia ambifaria MEX-5] Length = 257 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 82/255 (32%), Gaps = 24/255 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + + + S ++ G++ F A+G GFD Sbjct: 1 MKK--LALSIALACIAVGAHAKDWST---------IRFGVDASYPPFESKDASGKVVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + + +K ++ + AL++K+ D + + T R + F Sbjct: 50 VDLGNEICARL---KAKCVWIENDFDGMIPALKAKKFDGVLSSMSMTPARAEQIA--FSD 104 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K + + L G SI V+ GT E Y+ + ++ Sbjct: 105 KLFNTPTRLVSKKGTHLQPTAESLKGKSIGVEQGTIQETYAKTYWAPKG--VQVVPYQNQ 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 + + + R DA D L R + I + + + D Sbjct: 163 DGVYQDLMSGRLDAALQDAVQAEIGFLKTPRGANFEFAGKDIDDPKTLGNGAGIGLRKDD 222 Query: 235 TEWYNIVSWTHYAMV 249 + + ++ Sbjct: 223 ADLKAKIDHAIADII 237 >gi|300213989|gb|ADJ78405.1| Glutamine-binding protein / Glutamine transport system permease protein [Lactobacillus salivarius CECT 5713] Length = 411 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 89/281 (31%), Gaps = 30/281 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ I+ + + N + + G + F N + G D Sbjct: 1 MLKKAFIFIVSCLCTLLIFTNLNNNHVKA--DTKTYNIGTDVTYPPFEFANKNNQYVGID 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + K+ P+ +LQS QID + T R+ F Sbjct: 59 IDLMKAIAKE---EGFKVNIQPIGFNSAVQSLQSGQIDGVIAGMAITDERK--QKFDFSK 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + K I+S+ QL G + ++ GT + K + F+ + Sbjct: 114 PYYKTGFIMAVAKNSNITSLKQLRGKRVALKTGTAAANYALSLKDKYGFKT--VTFDDSD 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---- 236 + A D+ + T + I+ AI++G + Sbjct: 172 NMYNDVVNGNSVACFEDMPVMQYAIQTGTK---LKIVTKPAQSGYYGFAIMKGKNQELLH 228 Query: 237 --------------WYNIVSWTHYAMVTAEELGITQKNINQ 263 + IV+ AE+ + + N+ Sbjct: 229 KFDDGLAKLKKNGGYDKIVNRYINQNTIAEQKKANENSNNE 269 >gi|229587936|ref|YP_002870055.1| putative ABC transporter substrate-binding protein [Pseudomonas fluorescens SBW25] gi|229359802|emb|CAY46652.1| putative ABC transport system, substrate-binding protein [Pseudomonas fluorescens SBW25] Length = 266 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 90/251 (35%), Gaps = 16/251 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++L + + A + D +RG LK G V F G GF+ Sbjct: 1 MSKGYCSALLISAVAWIHMGLAQAGAIDDAVRRGALKVGTTPTYVPFEMTDKQGRIVGFE 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + +S A+ + ++ + + E LQ+K+ D++ T R +L L F Sbjct: 61 IDLLKVMSQALGVE---LELVTVPYTELVAGLQAKKFDLIGSGMTVTQER--NLKLNFSD 115 Query: 121 ITYFDGQGFIMH-----KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 GQ ++H K + + + I GTT E + A Sbjct: 116 SFIVVGQSVVLHPRLLGKVSSVEDLDD-ASYRIATTEGTTGEAAARRFLGAA----RISS 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F EE A DA+ D + + + L + PLA + +GD Sbjct: 171 FATPEEGVRQVLAGAADAFIHDAPYNLIALSRPENST-LLALEQPFTFEPLAFGLKKGDF 229 Query: 236 EWYNIVSWTHY 246 + N ++ Sbjct: 230 DSLNWINHFLN 240 >gi|227515035|ref|ZP_03945084.1| amino acid ABC superfamily ATP binding cassette transporter substrate binding protein [Lactobacillus fermentum ATCC 14931] gi|227086611|gb|EEI21923.1| amino acid ABC superfamily ATP binding cassette transporter substrate binding protein [Lactobacillus fermentum ATCC 14931] gi|299783275|gb|ADJ41273.1| Amino acid ABC superfamily ATP binding cassette transporter substrate binding protein [Lactobacillus fermentum CECT 5716] Length = 276 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 94/270 (34%), Gaps = 29/270 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAE---VKAN 53 K + ++ ++ + S S + DIKK+G L G + + Sbjct: 4 KKWLKMLMVAALVVMGAVSLAGCSSSSDSSVQDIKKKGELVVGTSADYPPYEFQIVKNGK 63 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+DV+ ++ I ++++ + LQ+K+ D++ WT R Sbjct: 64 QQIVGYDVELAHLIAKNIGVKK--VKFVNIAFPSLISELQNKKFDMVMAGMVWTKERAK- 120 Query: 114 LGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 ++F + GQ ++ K + S +S L GA++ Q + E Sbjct: 121 -AVSFSSTYHHGGQVLLVSKANENKYSGISALKGATLGAQQSSEQET-----IGKSLSGV 174 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK------SP 225 + + + +A D ++ A + P+++ I +I K P Sbjct: 175 KLVTESSITTLSQEVKAGTLDGLILAQTS--ADAFVAEHPNDYAIAKNITFKISAKTSDP 232 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + D +V+ T + EL Sbjct: 233 -RVVVRKSDKALLKVVNKTIKDAKKSGELD 261 >gi|241554177|ref|YP_002979390.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863483|gb|ACS61145.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 257 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 91/276 (32%), Gaps = 26/276 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGF 59 M ++ L ++ + A ++ G+ N F A+G W+G+ Sbjct: 1 MK--LLPTLFAGAALVLSAVTAQA----------EVRFGVMNESYPPFFAKDASGQWQGW 48 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D A+ + K + ++ ALQSK+ D++ + T R + F Sbjct: 49 EIDLMNAVCEQM---KEKCSIVEISWDGLIPALQSKKFDVIWSSMSNTAERSKV--IDFT 103 Query: 120 PITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y I K + ++ + G +I +Q T YF ++ Sbjct: 104 DKYYNTPSTLIGPKDQKPGATAEDVKGKTIGIQVSTIQSEYYKKYFAEA---AEEKTYQT 160 Query: 179 VEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 ++E + R D GD AL LK + + K L + G + Sbjct: 161 LDEAFQDLASGRIDYVFGDSLALDAFLKSDGGKDCCAKMGDVADDKEILGAGVSGGLRKE 220 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 + + A + ++K + D+ Sbjct: 221 DTELKAKLNTAIAA---VRASGQYDAINKKYFDFDI 253 >gi|325685987|gb|EGD28048.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 500 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 43/264 (16%), Positives = 89/264 (33%), Gaps = 26/264 (9%) Query: 1 MYK--DFFVSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K ++L L LF + + +++ IKK G L G++ Sbjct: 1 MKKLIKIMTALLLLAGLFTAAIPAVDAASSKKMASGTVMKKIKKSGKLVVGMSADYPPLE 60 Query: 49 E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 V + G DV+ + ++ + ++ ++ +AL++ +ID++ Sbjct: 61 FTKNVNGRNKYVGVDVELAKQIAKDLGVK---LEIKNMDFDSLLVALETGKIDVIISGMT 117 Query: 106 WTLLREISLGLAFRPITY---FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 T R+ + F I Y D K +S + G ++ Q G+ +L Sbjct: 118 PTAERKK--SIDFSKIYYAEKSDYFVISKTNKAKYTSTASFKGKTVGAQTGSLQYTSLKK 175 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 +K + + A ++ + DA TND V + Sbjct: 176 NAAKSGIKVKGLAKISN--LLMALKSGKVDAVLLGE-LNAKTYATNDTSLSLVKSSLSQA 232 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHY 246 + A + +G + ++ T Sbjct: 233 QMGNAVGVAKGQGDLVKAINKTIN 256 >gi|134291672|ref|YP_001115441.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134134861|gb|ABO59186.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia vietnamiensis G4] Length = 268 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 82/245 (33%), Gaps = 12/245 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++L + + + + L I K G L+ + F V + +G+D Sbjct: 10 RRTWLAALLAASVTALFAAAPAQADALDTIAKSGTLRVAVPEDYPPFGSVGTDMQPQGYD 69 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ A+ + +P+N+ R L + ++D++ + T RE + F Sbjct: 70 IDMAGLLARALGVK---LALVPVNSANRIPYLTTNKVDMVISSLGKTPEREKV--IDFSS 124 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 QG +S+ + L+G ++ G E+ L FE Sbjct: 125 AYAPYFQGVFGPADVKVSTPADLTGKTVGATRGALEEIALTQLAP----NATIKRFEDNN 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + + A+ P + +I SP + + + Sbjct: 181 ATIQAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEVKFVIKNSPCFVGVNKNEPRLLAK 238 Query: 241 VSWTH 245 + Sbjct: 239 IDDAI 243 >gi|322833795|ref|YP_004213822.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] gi|321168996|gb|ADW74695.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] Length = 259 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 87/251 (34%), Gaps = 23/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L + F++ + + LK G+ F A G+ +GFD Sbjct: 1 MKKLKIALLLGCAVASFSALADGS----------TLKFGLEAQYPPFESKSATGELQGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ +A K + + ALQ+++ D ++ + T R + F Sbjct: 51 IDLGNAVCAAA---SVKCDWYDTSFDGLIAALQARKFDAINSAMNVTDKR--RQAIDFTN 105 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y I K G + + L G I V G+ E ++ + + ++ Sbjct: 106 VIYRVPTKLIAKKDSGLLPTTESLKGKHIGVLQGSIQESYAQAHWAPKGVD--IVSYQDQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGD 234 ++ + R D A L+ ++ + D + +A + +GD Sbjct: 164 NQVYLDLSSGRLDGTLVLAPAGQTGFLSRPDGKDYGFVGDAVRDDKILGSGIAFGLRKGD 223 Query: 235 TEWYNIVSWTH 245 T+ + Sbjct: 224 TQLKEKLDTAI 234 >gi|293552749|ref|ZP_06673410.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecium E1039] gi|294615207|ref|ZP_06695088.1| ABC-type amino acid transport system, periplasmic component [Enterococcus faecium E1636] gi|294620019|ref|ZP_06699384.1| ABC-type amino acid transport system, periplasmic component [Enterococcus faecium E1679] gi|291591931|gb|EFF23559.1| ABC-type amino acid transport system, periplasmic component [Enterococcus faecium E1636] gi|291593741|gb|EFF25250.1| ABC-type amino acid transport system, periplasmic component [Enterococcus faecium E1679] gi|291603058|gb|EFF33249.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecium E1039] Length = 278 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 76/255 (29%), Gaps = 12/255 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K +++ ++ T A + +++K+ L + L + + Sbjct: 1 MKKKRLFALITSAFFILSACGTAAANQEDNSWSNVEKKKELVVATSGTLFPASYYNDQNE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+DVD + ++ + KI + N + ++ + D + + T RE Sbjct: 61 LVGYDVDLAKEVAKRL---NVKISFKEYNVDGQITSVSKGESDFAANDFGITKEREKKFS 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 L+ FD GI S+ L G + T+ + H K Sbjct: 118 LSEPFKYSFDSMIVRKKDDSGIHSLEDLKGKKAAGEPNTSYMRL----AEKHGAKLVTYD 173 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + R D D ++ +++ + +G+ Sbjct: 174 NATNDQYLSDVANGRTDVILNDYYLQKMAVSALPDIPVKILENVYFNENESGFLLKEGND 233 Query: 236 EWYNIVSWTHYAMVT 250 + M Sbjct: 234 ALKKKIDGVLKEMKE 248 >gi|269968082|ref|ZP_06182119.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio alginolyticus 40B] gi|269827328|gb|EEZ81625.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio alginolyticus 40B] Length = 247 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 85/258 (32%), Gaps = 21/258 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L + + +K + F + N +GFD Sbjct: 1 MKKILLASLIGLSSATMAANAAAQE---------EIKFAMEATYAPFEYMDENNQIQGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I +K + + AL+ K+ D D T R + F Sbjct: 52 VDLANALCKEI---EAKCTFHNQSFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFTN 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ K+ ++ L G + VQ G+T + L + + + + Sbjct: 107 AYYDNSAAFVSIKE-KVADQKALEGKRVGVQNGSTHQSYLIEQMP----GVTAVPYSSYQ 161 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238 + + R D+ GD + + D + + + A+ +G+ E Sbjct: 162 DAFIDMKNGRIDSVFGDTAVVAEWFKKEDNLAYVGEHVTNPKYFGNGFGIAVNKGNDELV 221 Query: 239 NIVSWTHYAMVTAEELGI 256 N ++ + E + Sbjct: 222 NKLNTALKTVKANGEYDV 239 >gi|237799756|ref|ZP_04588217.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022611|gb|EGI02668.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 273 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 21/257 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I L+ L ++ + + L ++K L + F+ + + GFD Sbjct: 1 MNYRALLGI-GLVTLAASTQALAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ + ++ + S + DI + + R Sbjct: 60 VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFSFP-VE 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174 + I S LSG + + + ++ E L + P+ Sbjct: 116 YYASPAVIVVNATDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFED 175 Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 ++ R DA + L K D+ + + + + P + Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLADESLYEEPNS 232 Query: 228 PAIIQGDTEWYNIVSWT 244 AI + D EW V Sbjct: 233 VAIEKDDPEWDAKVREV 249 >gi|86138396|ref|ZP_01056970.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Roseobacter sp. MED193] gi|85824921|gb|EAQ45122.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Roseobacter sp. MED193] Length = 260 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 89/246 (36%), Gaps = 15/246 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 F + L L F T+ A L IK+ G ++ ++ F V + + GFD Sbjct: 12 FAAGLALAATFTTANFAAAEELDQIKEDGVIRIAMSGAYPPFNFVNDSNEVVGFDPAVGA 71 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + + ++ + L + + D + + T R + F Y Sbjct: 72 EIAKRMGVE---VEIVTTAWDGIIGGLLANKYDAIVGSMSITEER--QQVVDFVGPYYTT 126 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + K GI+S + L A + + G T E + M Y ++ + E+ Sbjct: 127 KRAI-FAKPGGITSAAALGDAKVGLTLGETHEAWARE------MGYDVRTYKGLPELLLE 179 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYNIVSWT 244 R D D + A+ + ++V++ D ++ AI +G+ E + Sbjct: 180 LEHGRVDVIVNDS--IAAILAMKETGQDYVMITDFETEEFGAGIAIRKGNPELAAAMQGA 237 Query: 245 HYAMVT 250 AM+ Sbjct: 238 LDAMME 243 >gi|238020028|ref|ZP_04600454.1| hypothetical protein VEIDISOL_01904 [Veillonella dispar ATCC 17748] gi|237863552|gb|EEP64842.1| hypothetical protein VEIDISOL_01904 [Veillonella dispar ATCC 17748] Length = 261 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 93/324 (28%), Gaps = 73/324 (22%) Query: 1 MY-KDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDW 56 M K + + F + N + G + F +G Sbjct: 1 MKFKKIATLLGAFTIASSLFIAGCGNTGTSQK-----TWRVGTDATYAPFGFKDKDSGKL 55 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD A++ + LN ALQS IDI + + + + Sbjct: 56 AGFDVDIINAIAQEEGVEADV---QNLNFDALLPALQSNTIDIAISDMTI--SEDRAKSV 110 Query: 117 AFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y G G +++ I+S L G I V G+T + A +++ IV Sbjct: 111 DFSKPYYIAGNGLVVNIDNTNINSFKDLEGKRIGVSIGSTGAEIASKIPNADVRQFNLIV 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + D D + + + + +PL A+ +G+T Sbjct: 171 -----DAFLELQNRGVDVVINDTPVNEYYVNSKGKGIA-KVTGEDYDAAPLGIAVKKGNT 224 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295 E N V+ GL K Sbjct: 225 ELLNKVND----------------------------------------------GLAK-- 236 Query: 296 TYRIIRHMGNYGEMFDRNLGNQSE 319 I+ G Y E++ + G + Sbjct: 237 ----IKANGKYAEIYKKWFGKEPP 256 >gi|237785696|ref|YP_002906401.1| glutamate ABC transporter solute-binding protein [Corynebacterium kroppenstedtii DSM 44385] gi|237758608|gb|ACR17858.1| glutamate ABC transport system, solute-binding protein [Corynebacterium kroppenstedtii DSM 44385] Length = 317 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 95/274 (34%), Gaps = 22/274 (8%) Query: 3 KDFFVSILCLIILF--FTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 + ++ L+ + T+ ++ S+L +IK G + G G + + G Sbjct: 30 RAMMAAVTALVFVTPTLTACGSSEPVSVLDEIKA-GHIVVGTKYDQPGMGMRTPDKKFVG 88 Query: 59 FDVDFCRA----LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 D D R ++ D KI + + +R +++ ++ +++ R + Sbjct: 89 VDPDVSRYVIDHIAEKNGWDKPKITWRETPSAQRETLIKNGEVGMITATYSINKGR--AN 146 Query: 115 GLAFRPITYFDGQGFIMH-KKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYH 172 +AF Q ++ K GI S++ L+ G +C +G+T + + Sbjct: 147 AVAFGGPYLVTHQALLVRDKDTGIKSLTDLNKGKRLCSVSGSTPAQKVKEALPE----VQ 202 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII----SKSPLAP 228 F+ A + DA T D + LY V + + Sbjct: 203 LQEFDSYSSCVEALHQKKVDALTTDATILYGFATQYPGEFRVVDMKQDDGSWWTDEHYGI 262 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNI 261 +GDT+ ++ M + I KN+ Sbjct: 263 GHAKGDTKSTEAINDALKDMWASGAYASIVHKNL 296 >gi|260222060|emb|CBA31247.1| Lysine-arginine-ornithine-binding periplasmic protein [Curvibacter putative symbiont of Hydra magnipapillata] Length = 261 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 83/266 (31%), Gaps = 25/266 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F ++L + L ++ G + F A+G KG + Sbjct: 1 MKRQFVKALLSGLFLAAGLAQAQ----------DVVRIGTLSDYPPFEYKDASGQLKGME 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ A+ + +K +Y+ ++ AL++K+ID + T R + F Sbjct: 51 IELGNAMCKHM---QAKCEYVTMDFDALIPALKAKKIDAVLAQMSITAERSKV--VDFTD 105 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + ++ GI+ + L G ++ V +G+ +E + Sbjct: 106 LFTLAPVQYVAKVGSGINEDPATLRGKTVGVYSGSNSETYFKKRLPKSKSGIVTKAYPNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 + I A R + D + Y + ++ A+ +GD Sbjct: 166 DAIWLDLEAGRLNTTLTDTTVAYEWLQKTGKAKGFDFAGKPVNDVEIFGEGTGIAVRKGD 225 Query: 235 ---TEWYNIVSWTH-YAMVTAEELGI 256 + + AE + Sbjct: 226 ALKARFNAAIKKVLADGTFAAENKKV 251 >gi|146309284|ref|YP_001189749.1| extracellular solute-binding protein [Pseudomonas mendocina ymp] gi|145577485|gb|ABP87017.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas mendocina ymp] Length = 250 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 73/220 (33%), Gaps = 10/220 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 LK G F + A+G GFDV+ +AL + + ++ + + + A Sbjct: 23 AADKLKLGTEGAYPPFNLIDASGKVTGFDVEIGQALCAKM---QAECEVVTSDWDGIIPA 79 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICV 150 L +K+ D L + T R+ + F Y + FI K + L G I Sbjct: 80 LNAKKFDFLIASMSITEERQA--AVDFTEPYYTNKLQFIAPKSAEFKTDEASLKGKVIGA 137 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q T L D +++ E + R D D + ++ Sbjct: 138 QRATIAGTWLEDNL---GKVVDIKLYDTQENAYLDLASGRLDGVLADTFVNWEWLKSDAG 194 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + + + A+ +GD ++ A++ Sbjct: 195 KNFEFKGDPVFDNDKIGIAVRKGDP-LREKLNTALQAIIE 233 >gi|329727185|gb|EGG63641.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus 21172] Length = 485 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 92/283 (32%), Gaps = 25/283 (8%) Query: 3 KDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51 K IL L +L T+ + IK+RG L+ G++ V Sbjct: 2 KCLIRFILVLGLLISSAMVYINPTAHAEQDQTWKKIKERGELRVGLSADYAPMEFEHTVN 61 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++ G D+D + ++ + K++ + ++ AL++ +IDI+ T R+ Sbjct: 62 GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118 Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + F ++ K + + + Q GT E + Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228 R+ ++ A ++ + + + A N + +V + + +A Sbjct: 173 NASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + + + ++ T + + N D + Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273 >gi|260887996|ref|ZP_05899259.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Selenomonas sputigena ATCC 35185] gi|260862247|gb|EEX76747.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Selenomonas sputigena ATCC 35185] Length = 251 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 68/242 (28%), Gaps = 14/242 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L + A+ + G++ + + GFDV+ + + Sbjct: 1 MLAAGFMAGCGGQKAAND-----APKKIVIGLDDNFPPMGFLDEKNEITGFDVELAKEAA 55 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + + +++ ++ + +QS +ID L + T R+ L F D Q Sbjct: 56 KRLGTE---VEFKGIDWASKEAEIQSGRIDALWNGLEITEERKK--NLLFSEPYMNDQQV 110 Query: 129 FIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 I+ L + Q+ + T D K + Sbjct: 111 IFKRANDASIAKEDDLKDKIVATQSASGTAEDYVDGHKDVTGYKDVKKYADYLSAFMDLE 170 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTHY 246 R DA D + P + L + + A + DT + Sbjct: 171 NGRVDAIVCDEII--GRYYMSKHPDKIAALDGHVGPVTQFGVAYRKDDTALKEKMQKVLD 228 Query: 247 AM 248 M Sbjct: 229 EM 230 >gi|94500104|ref|ZP_01306638.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Oceanobacter sp. RED65] gi|94427677|gb|EAT12653.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Oceanobacter sp. RED65] Length = 250 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 33/252 (13%), Positives = 81/252 (32%), Gaps = 30/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ + L ++ + + ++ ++ F +G GF+ Sbjct: 1 MKRQLL-TLFSALALSVSANAADP-----------IRVAVDAPYPPFEYKAPDGSLTGFE 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ A+ I ++ L +++ D++ + R+ + F Sbjct: 49 IELGNAVCQEITK--QDCDWVIQAWDGIIPGLLARKYDMIFSSMSINEKRK--QKVLFSE 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y F K G + + G I VQ T + L + K + + + Sbjct: 105 PYYQTPSAFFAEKGNG-FNPTDSKGKRIGVQRATVQDTYLTEMHKEA----EIVRYTTAD 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK------SPLAPAIIQGD 234 ++ + R DA D ++ + + D+++K +A A + + Sbjct: 160 DMVIDLKGERLDALFVDAPVGESM---LKDDKGYEQVGDMVNKPVSIFGEGIAAAFNKRN 216 Query: 235 TEWYNIVSWTHY 246 + VS Sbjct: 217 KDLEKKVSAALK 228 >gi|299068867|emb|CBJ40108.1| putative substrate-binding periplasmic (Pbp) abc transporter protein [Ralstonia solanacearum CMR15] Length = 255 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 75/223 (33%), Gaps = 13/223 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A +IK+ G L F + GF+++ +A+ + I++ Sbjct: 22 QARSYEEIKQSGKLIVATGGEFPPFNYFAGS-KLTGFEIEVAQAVVKKMG---LAIEWKT 77 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L+ LQ + D++ + T R + F Y G + I + + Sbjct: 78 LSFDSLLAGLQQNRWDLVISSHGVTETRAK--AVDFTSPHYCSGSSIVAR-DPAIRTAAD 134 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+ + VQ G+T + K F + + A + R DA+ D Sbjct: 135 LTDKVVAVQTGSTYLENVRKLAKPR----EIKNFPQDRDARTALSSGRADAWVTDK--FV 188 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 AL P + L + +A A+ +G+T + Sbjct: 189 ALAAIQSNPGAGLKLGSPLFVERIAAAVAKGNTALAASYNTAL 231 >gi|82880401|gb|ABB92746.1| sensor protein FLII81PE [synthetic construct] Length = 753 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 79/210 (37%), Gaps = 6/210 (2%) Query: 50 VKANGDWKGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 + +N G+ D+ A+ A+ +++ +P+ ++ R LQ+ D +T Sbjct: 264 LGSNQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTT 323 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 + R+ F + G + K I + L ++ V +GTT+E+ L + Sbjct: 324 NNVERQKQAA--FSDTIFVVGTRLLTKKGGDIKDFANLKDKAVVVTSGTTSEVLLNKLNE 381 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 M I + + + R A+ D + L + +P I+ S+ Sbjct: 382 EQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEA 441 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + D ++ ++ T + T+ E Sbjct: 442 YGCMLRKDDPQFKKLMDDTIAQVQTSGEAE 471 Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 11/32 (34%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 S L I K G + G V F+ G Sbjct: 1 AGSTLDKIAKNGVIVVGHRESSVPFSYYDVAG 32 >gi|238786811|ref|ZP_04630612.1| Amino acid-binding protein [Yersinia frederiksenii ATCC 33641] gi|238725179|gb|EEQ16818.1| Amino acid-binding protein [Yersinia frederiksenii ATCC 33641] Length = 262 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 84/246 (34%), Gaps = 15/246 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+K + CL + S + A G F + +GFD Sbjct: 1 MFKRLMLVGTCLAAVLSASSAMAAEP--------TYVVGSGGTYRPFEYENSQKQLEGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A+ A + +++ + + F L S DI+ T R+ + F Sbjct: 53 IDIIKAIGKA---EGFQVKLVNTPWEGIFATLGSGDRDIIISGITITDKRKQM--VDFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q ++ K + S++ L ++ V +T ++ ++D + F+ Sbjct: 108 PYFPAEQTIVVPKDSKVDSIAALKNLNVGVVNSSTGDIVVSDVLGKN--STAIKRFDNTP 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A GD+ T+ + ++ D + A+ +G+ E N Sbjct: 166 LMLQELYEDGIAAAVGDVGVAKFYLKTHPEKAFQLVSDDKFERQYFGIAVAKGNEELRNK 225 Query: 241 VSWTHY 246 ++ Sbjct: 226 INSGLQ 231 >gi|303231763|ref|ZP_07318485.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Veillonella atypica ACS-049-V-Sch6] gi|302513554|gb|EFL55574.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Veillonella atypica ACS-049-V-Sch6] Length = 260 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 88/251 (35%), Gaps = 15/251 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K ++++ + + + + ++ G L+ G T F + + + GFDV Sbjct: 5 KKLTAIALVAVAAMGLLAGCGSEKS-KMTQEAGVLRVGSETTFPPFEFTEGD-KYVGFDV 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + K+++ + A+QS ID+++ + T RE L F + Sbjct: 63 DLSEAIAKKLG---LKMEFKSMGFDALIPAVQSGDIDMIAAGINSTPEREK--ALDFSDV 117 Query: 122 TYFD--GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + I ++ +L+G ++ VQ GT + Sbjct: 118 YFDQGGFITVVRKDNTSIHNMDELAGKTVGVQIGTVPVD-----MAKAIPNTTVKEMDSN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 I +A D D A+ L + ++ + + + +G+ E + Sbjct: 173 ANIFMELKAGTIDGAIIDN-AVAMYYLKQGADKDLKLVGEPTKAPGIVLGVKKGNKELQD 231 Query: 240 IVSWTHYAMVT 250 V+ + Sbjct: 232 AVNKALKELKE 242 >gi|293605112|ref|ZP_06687504.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292816515|gb|EFF75604.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 247 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 78/212 (36%), Gaps = 13/212 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ + V +G GFD++ AL+ A+ ++++ ++ K ALQ+ Sbjct: 28 TIRAVTDATFPPMEFV-KDGKRTGFDIELVEALAGAMGKK---VEWIDIDFKGLIPALQA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 + DI T R + F Y G + I ++ L G + VQ GT Sbjct: 84 GRADIAVSAIYITPERSKV--VDFTDPYYAGGLVVLTKADGPIKTLKDLDGRKVSVQVGT 141 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + L ++F + + E+ +E+ + R DA A KL + Sbjct: 142 KSVNYLKEHFPS----VQRVEVEKNQEMFNLVQIGRADAAVTGKP---AAKLFAQSTTGL 194 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 +L D I+ A+ + E ++ Sbjct: 195 TVLGDQITTEDYGIAVPKSKPELTRELNAALQ 226 >gi|227891736|ref|ZP_04009541.1| glutamine-binding protein / glutamine transport system permease protein [Lactobacillus salivarius ATCC 11741] gi|227866461|gb|EEJ73882.1| glutamine-binding protein / glutamine transport system permease protein [Lactobacillus salivarius ATCC 11741] Length = 485 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 90/281 (32%), Gaps = 30/281 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ I+ + + N + + G + F N + G D Sbjct: 1 MLKKAFIFIVSCLCTLLIFTNLNNNHVNA--DTKTYNIGTDVTYPPFEFANKNNQYVGID 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + K+ P+ +LQS QID + T R+ F Sbjct: 59 IDLMKAIAKE---EGFKVNIQPIGFNSAVQSLQSGQIDGVIAGMAITDERK--QKFDFSK 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + K I+S+ QL G + ++ GT + K + F+ + Sbjct: 114 PYYKTGFIMAVAKNSNITSLKQLRGKRVALKTGTAAANYALSLKDKYGFKT--VTFDDSD 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---- 236 + A D+ + T + I+ + A+++G + Sbjct: 172 NMYNDVVNGNSVACFEDMPVMQYAIQTGTK---LKIVTNPAQSGYYGFAVMKGKNQELLH 228 Query: 237 --------------WYNIVSWTHYAMVTAEELGITQKNINQ 263 + IV+ AE+ + + N+ Sbjct: 229 KFDDGLAKLKKNGGYDKIVNRYINQNTIAEQKKANENSNNE 269 >gi|261340702|ref|ZP_05968560.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Enterobacter cancerogenus ATCC 35316] gi|288317118|gb|EFC56056.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Enterobacter cancerogenus ATCC 35316] Length = 260 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 88/245 (35%), Gaps = 20/245 (8%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ G + F A G+ GFD+D L I ++ Y+ +L++ Sbjct: 27 KIRIGTDPTYAPFESKNAKGELVGFDIDLANELCKRI---KAQCTYVENPLDALIPSLKA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAG 153 K+ID++ + T R +AF Y ++ K I L G + V G Sbjct: 84 KKIDVIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKSSDIQPTLDSLKGKRVGVLQG 141 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT E +++ + + ++ E I A A R DA D A L + Sbjct: 142 TTQETYGNEHWAPKGI--EIVSYQGQENIYADLTAGRIDAAFQDEVAASEGFLKQPVGKD 199 Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + I L + + D E ++ +A + A+ ++++K Sbjct: 200 YKFGGPSIKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYDKLAKKY 252 Query: 269 TNPDV 273 + +V Sbjct: 253 FDFNV 257 >gi|125623402|ref|YP_001031885.1| arginine-binding periplasmic protein 1 precursor [Lactococcus lactis subsp. cremoris MG1363] gi|124492210|emb|CAL97139.1| Arginine-binding periplasmic protein 1 precursor [Lactococcus lactis subsp. cremoris MG1363] gi|300070149|gb|ADJ59549.1| arginine-binding periplasmic protein 1 precursor [Lactococcus lactis subsp. cremoris NZ9000] Length = 273 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 81/271 (29%), Gaps = 26/271 (9%) Query: 3 KDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAE---VKANGD 55 K + ++ L + + N + +KK G LK ++ F Sbjct: 6 KKMTLGLVGLAAVATLAACGNGKSATNQVDKVKKAGVLKVALSPDYPPFEFQIIKDGKNT 65 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G DVD A+ + ++ ++ +L + + DI RE Sbjct: 66 VVGSDVDLANAIGKKLGVK---VKIESMDFNNVLASLNTGKADIAISGISKEPSREK--S 120 Query: 116 LAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + Y ++ K SSV G + Q G+ E + FK Sbjct: 121 VNFSDVYYTASNYLVVKKSDLSKYSSVDDFKGKKVAAQKGSIQEGIVTSQFK----GTTE 176 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA--PAII 231 I ++ + + + + + N + K A+ Sbjct: 177 IALPQIGDEINEVKGGQVQGAVIENLIAKSYVAANSD-LAIANVEVKTPKDSYGSAVALP 235 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 +G E +V+ EEL Q N + Sbjct: 236 KGSDELTKVVNSVIK-----EELKNGQINKD 261 >gi|170735478|ref|YP_001774592.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|169821516|gb|ACA96097.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 268 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 86/245 (35%), Gaps = 12/245 (4%) Query: 2 YKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++L +I F + +A L I K G L+ + F V + +G+D Sbjct: 10 RRTWLAALLAAPVIALFAAAPAHADALDTIAKNGTLRVAVPEDYPPFGSVGTDMQPQGYD 69 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ ++ ++ +P+N+ R L + ++D++ + T RE + F Sbjct: 70 IDMAGLLAKSLGVK---LKLVPVNSANRIPYLTTNKVDMVISSLGKTPEREKV--IDFSS 124 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 QG +S+ + L+G ++ G E+ L+ FE Sbjct: 125 AYAPYFQGVFGPSDVKVSTPADLTGKTVGATRGALEEIALSQLAP----NATIKRFEDNN 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + + A+ P + +I SP + + + Sbjct: 181 ATIQAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEVKFVIKNSPCFVGVNKNEPRLLAK 238 Query: 241 VSWTH 245 + Sbjct: 239 IDDAI 243 >gi|330505508|ref|YP_004382377.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01] gi|328919794|gb|AEB60625.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01] Length = 250 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 72/220 (32%), Gaps = 10/220 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 LK G F + A+G GFDV+ +AL + + ++ + + + A Sbjct: 23 AADKLKLGTEGAYPPFNLIDASGKVTGFDVEIGQALCAKM---QAECEVVTSDWDGIIPA 79 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICV 150 L +K+ D L + T R+ + F Y + FI K + L G I Sbjct: 80 LNAKKFDFLIASMSITEERQA--AVDFTEPYYTNKLQFIAPKSADFKTDEASLKGKVIGA 137 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q T L D +++ E + R D D + ++ Sbjct: 138 QRATIAGTWLEDNL---GKVVDIKLYDTQENAYLDLASGRLDGVLADTFVNWEWLKSDAG 194 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + + A+ +GD ++ A++ Sbjct: 195 KDFEFKGDPVFDNDKIGIAVRKGDP-LREKLNTALQAIIE 233 >gi|325293716|ref|YP_004279580.1| Lysine-arginine-ornithine-binding periplasmic protein [Agrobacterium sp. H13-3] gi|325061569|gb|ADY65260.1| Lysine-arginine-ornithine-binding periplasmic protein [Agrobacterium sp. H13-3] Length = 256 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 90/254 (35%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGF 59 M FF ++L ++F+ +A ++ GI N F A+G W+G+ Sbjct: 1 MK--FFATLLAGTAFAVSAFTASAD----------VRFGIMNESYPPFFAKDASGKWQGW 48 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D A+ + + K + L+ ALQ+K+ D++ + T RE + F Sbjct: 49 EIDLMDAVCAEM---KEKCSIVELSWDGLIPALQTKKFDVIWSSMSNTEEREKV--IDFT 103 Query: 120 PITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y I K ++ + G +I +Q T YF A ++ Sbjct: 104 NKYYNTPSKLIGAKDGKPGAAPEDVKGKTIGIQVATIQSEYYKKYFAA---VADEKTYQT 160 Query: 179 VEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 ++E A R D GD L +K + + K L + G + Sbjct: 161 LDEAFQDLAAGRIDYVFGDSLVLDAFVKSDAGKDCCADMGNVADDKEILGLGVSGGLRKD 220 Query: 238 YNIVSWTHYAMVTA 251 + A + A Sbjct: 221 DTELKNKLNAALAA 234 >gi|298291725|ref|YP_003693664.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296928236|gb|ADH89045.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 266 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 38/261 (14%), Positives = 82/261 (31%), Gaps = 13/261 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ + A +L DI ++ + + + ++ G D Sbjct: 1 MLKHSVLAAALAAAFLVGGTAAKADLLDDIMAAKKIRISTDLAIPPSGMMDSSMKPVGSD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ L+ + I+++ R LQ+ + D++ T R + F Sbjct: 61 VETAELLAKDLG---LTIEWVQTTGATRIPNLQTNKADVVISTLSVTPERAKV--IDFTD 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 K + L G +I V GTT + L + K ++ ++ Sbjct: 116 PYAALESVVGGLKTIEVKDWDGLKGKTIAVSRGTTQDTALTNRAKEGG-GFNVARYDDDA 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A + D + ++ P+ +I+ LA + +G+ Sbjct: 175 TMVTAAVTGQADFIATSATI--VNQIGVKNPARAFEPKVLITTFNLAMGVKKGEPRL--- 229 Query: 241 VSWTHYAMVTAEELGITQKNI 261 + AE + + N Sbjct: 230 -KAKLNEWI-AENIKNGKLNA 248 >gi|288905590|ref|YP_003430812.1| amino acid ABC transporter (binding protein) [Streptococcus gallolyticus UCN34] gi|288732316|emb|CBI13886.1| putative amino acid ABC transporter (binding protein) [Streptococcus gallolyticus UCN34] Length = 271 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 37/253 (14%), Positives = 82/253 (32%), Gaps = 16/253 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGD-IKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K F IL +I+ ++ S++ + I+ +G + + F + Sbjct: 1 MKKFFRRFILLIIVGSLSACSSSTGVSQSSIQDKGKIVIATESEFAPFEFKTLIDGKDTL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ A++ A+ D + ++ ++ S + DI T R+ Sbjct: 61 VGADIELGNAIADALGVDAD---FSVMSFNNVLASVTSGKADIAIAGISVTDERKK--AY 115 Query: 117 AFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K +++ L+G ++ Q G+ E D + Sbjct: 116 DFSDAYYEAENIVIIKKSDEATYTTLESLAGKAVGAQKGSIQENIAKDQLP----DSSLV 171 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E+ + ++ + + ND + + A A +G Sbjct: 172 SLTSNGEMINELKNNQLQTVVLEKAIAEGYVSQNDDLMIADMTLESSDTDAYAVAFAKGT 231 Query: 235 TE-WYNIVSWTHY 246 + + V+ Sbjct: 232 DQDLIDTVNDVIK 244 >gi|240850319|ref|YP_002971712.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Bartonella grahamii as4aup] gi|240267442|gb|ACS51030.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Bartonella grahamii as4aup] Length = 250 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 80/248 (32%), Gaps = 21/248 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M L + FT + LK F+ + +N +G D Sbjct: 1 MK--LLAGALIISAALFTQLA----------DAKTLKIASEGTYPPFSYIDSNNKLQGLD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + + + L +K+ D + + T R + F Sbjct: 49 IDISYALCKKMNVE---CTVVTQDFEGMIPGLIAKKYDAIIASLSLTQER--LQKIDFTD 103 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y I+ K GI S G ++ VQ+ TT D++ + + ++ Sbjct: 104 PYYDTALAVIVTKASGIKEISTQDFRGKNLGVQSNTTQAFYAEDHYAS--EEVKIKLYPS 161 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E++ HR D D + ++ +K P+A A+ Q + + Sbjct: 162 TIEVNRDLLNHRLDVIIVDKLQALNWLKNEGKDCCLLLGTLEETKFPVAIALRQNNNDLK 221 Query: 239 NIVSWTHY 246 N + Sbjct: 222 NKFNKALK 229 >gi|327438809|dbj|BAK15174.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Solibacillus silvestris StLB046] Length = 259 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 32/246 (13%), Positives = 73/246 (29%), Gaps = 9/246 (3%) Query: 3 KDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F + L + T+ + S K+ + G F + G+ G D Sbjct: 4 RKLFKWAAPLAAASMILTACGADESTSTGDKEYTKIVAGTEATYAPFEYLDDKGNVVGLD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + A+ + + + + + ++D+ + T R+ F Sbjct: 64 SEILAAIGEEMGIETEV---KNVGWDSMMSQVTNGEVDMGAAAITITDERKE--SYDFTD 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + + ++S+ + I VQ TT + + + +E Sbjct: 119 PYYEATLLIVTKEGSTVASLEDIKDKKIAVQINTTGHIAAQELQGVA--SSKILAYENFS 176 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 DA GD + + N + + K + +G+ E +I Sbjct: 177 VALTEVLTGAADAAIGDNAVILDYLENNPDSGLKAVEDNSFEKDYFGFMVKKGNKELLDI 236 Query: 241 VSWTHY 246 ++ Sbjct: 237 LNEGLQ 242 >gi|311278730|ref|YP_003940961.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter cloacae SCF1] gi|308747925|gb|ADO47677.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter cloacae SCF1] Length = 260 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 90/245 (36%), Gaps = 20/245 (8%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ G + F A G+ GFD+D + L I ++ ++ +L++ Sbjct: 27 KVRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153 K+ID + + T R +AF Y ++ K + +S L G + V G Sbjct: 84 KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVKKGSPVTPELSTLKGKRVGVLQG 141 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT E +++ + + ++ + I + A R DA D A L + Sbjct: 142 TTQETYGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPIGKD 199 Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + I L + + D E ++ +A + A+ ++++K Sbjct: 200 YQFGGPSIKDEKLFGVGTGMGLRKEDNELREALNKA-FAQMRAD------GTYDKLAKKY 252 Query: 269 TNPDV 273 + +V Sbjct: 253 FDFNV 257 >gi|224583158|ref|YP_002636956.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224467685|gb|ACN45515.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 260 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 97/264 (36%), Gaps = 26/264 (9%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 F ++ S A+I I + G + F A G+ GFD+D + L I Sbjct: 14 FSSATSAFAAIPQKI------RIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---N 64 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 ++ ++ +L++K+ID + + T R +AF Y ++ K Sbjct: 65 TQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNS 122 Query: 136 GIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I +V+ L G + V GTT E +++ + + ++ + I + A R DA Sbjct: 123 DIQPTVASLKGKRVGVLQGTTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAA 180 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMV 249 D A L ++ + L + + D E ++ +A + Sbjct: 181 FQDEVAASEGFLKQPVGKDYKFGGPAVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEM 239 Query: 250 TAEELGITQKNINQVSKDTTNPDV 273 A+ +++K + DV Sbjct: 240 RAD------GTYEKLAKKYFDFDV 257 >gi|298293081|ref|YP_003695020.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296929592|gb|ADH90401.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 265 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 73/201 (36%), Gaps = 10/201 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ G + +G GF+VD A+ + + +I ++ + E AL Sbjct: 32 VLRVGTFPDNPPWEFR-EDGHLVGFEVDLIEAIGTRLG---MRIDFVGMAFGELLPALAG 87 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 +ID+ + T R F Y QG ++ K + S+ L+G + +AG+ Sbjct: 88 DRIDVAMCSMSITPERRR--RFDFTQPYYRTSQGMVVMKSARVRSLEDLAGKRVGTEAGS 145 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T E L+D + + +E A DAY GD+ AL L + Sbjct: 146 TNEQWLSDNRARYGFGPT-VPVVGLERALELLSAGEIDAYFGDLPALLYQLLKRPELAVV 204 Query: 215 VILPDIISKSPLAPAIIQGDT 235 LP A A+ Sbjct: 205 ERLPTEDR---YAMALRLNSP 222 >gi|77460513|ref|YP_350020.1| lysine-arginine-ornithine-binding periplasmic protein [Pseudomonas fluorescens Pf0-1] gi|77384516|gb|ABA76029.1| L-ornithine-binding protein / L-arginine-binding protein [Pseudomonas fluorescens Pf0-1] Length = 257 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 85/265 (32%), Gaps = 24/265 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L +L +F+ LK GI FA +G GFD Sbjct: 1 MKKLVLLGALALSVLSLPTFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + K Q++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCEEM---KVKCQWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTN 105 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M + + +++L G +I VQ G+ E + + Sbjct: 106 KYYNTPARLVMKEGTQVSEGLAELKGKNIGVQRGSIHERFAREVLAPLG--AEIKPYGSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 EI A R D D + L L D + + A+ +G Sbjct: 164 NEIYLDVAAGRLDGTVADATLLNDGFLKTDAGKGFAFVGPAFTDVKYFGDGVGIAVRKG- 222 Query: 235 TEWYNIVSWTHYAMVTAEELGITQK 259 + ++ A+ + Q Sbjct: 223 DALKDKINTAIAAIRENGKYKAIQD 247 >gi|254251722|ref|ZP_04945040.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] gi|124894331|gb|EAY68211.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] Length = 260 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I K ++ + Sbjct: 22 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI---NVKCVWVAQDLDGIIP 78 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149 AL++K+ DI+ + T R + F Y I + +V+ L G + Sbjct: 79 ALKAKKYDIIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKAGSPLLPTVASLKGKRVG 136 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E Y++ H + ++ +++ + R DA D L Sbjct: 137 VEQGSTQETYAKAYWEPHG--VTIVPYQNQDQVYTDLGSGRLDATLQDELQADYGFLRTP 194 Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245 R K P A + + DT+ ++ Sbjct: 195 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKLKINKAL 235 >gi|225181290|ref|ZP_03734735.1| extracellular solute-binding protein family 3 [Dethiobacter alkaliphilus AHT 1] gi|225168070|gb|EEG76876.1| extracellular solute-binding protein family 3 [Dethiobacter alkaliphilus AHT 1] Length = 268 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 38/259 (14%), Positives = 89/259 (34%), Gaps = 26/259 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDI------------KKRGFLKCGINTGLVGFA 48 M K ++++ +++L + + + + L G N F Sbjct: 1 MKKFKWLALCFVLVLALGVLAGCGNNEANNNENNNGNDNGDAEAAETLIMGTNAEFAPFE 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + + ++ GFDVD + ++ + +++ + A+ S+++D+ T Sbjct: 61 FINDDNEYDGFDVDMAKMIADELG---MELEIDNMAFDGLISAVLSERVDMAVAAMTITE 117 Query: 109 LREISLGLAFRPITYFDGQGFIM-HKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166 R + F GQ ++ I SV L S+ VQ GTT ++ + Sbjct: 118 ER--QEEVNFSDPYINAGQVIVVLEDNDEIQSVEDLQEDKSVAVQLGTTGDIEASRIVD- 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + +++ R DA D T ++ + +++ Sbjct: 175 ---DSNIVRLQQINAAFMELETGRVDAVIVDNPVAQRYINTMG---SLKMVGEPLTEEYY 228 Query: 227 APAIIQGDTEWYNIVSWTH 245 A+ + +TE ++ Sbjct: 229 GIAVNKDNTELLEQINQAL 247 >gi|254422605|ref|ZP_05036323.1| Bacterial extracellular solute-binding protein, family 3 [Synechococcus sp. PCC 7335] gi|196190094|gb|EDX85058.1| Bacterial extracellular solute-binding protein, family 3 [Synechococcus sp. PCC 7335] Length = 299 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 85/221 (38%), Gaps = 8/221 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 + L I++ G +K + + F V + + G+D+D + ++ + + I + Sbjct: 58 ATLEQIRESGQVKVAVPSDFPPFGFVNTSMEPIGYDIDMAKEIAKGLNAELEIIPVV--- 114 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R LQ+ ++D++ + R+ L + F IS++ LS Sbjct: 115 GGYRIPFLQTDRVDMIISSLGKNDERD--LIIDFSEPYAPFFSAIYGGPTADISTIEDLS 172 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G SI V G+ +L ++ + +A + + DA + A Sbjct: 173 GRSIGVAQGSLEDLEIS-SLTEDISNVDIKRYANNSLTASALVSGQVDAIATGN--VVAA 229 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 KL D P + I+ SP + +GDTE+ + ++ Sbjct: 230 KLIRDNPGSEITSKFILKDSPCYVGVREGDTEFVDEINEII 270 >gi|171057833|ref|YP_001790182.1| extracellular solute-binding protein [Leptothrix cholodnii SP-6] gi|170775278|gb|ACB33417.1| extracellular solute-binding protein family 3 [Leptothrix cholodnii SP-6] Length = 283 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 71/220 (32%), Gaps = 9/220 (4%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G + F G+ GFD+D A+++ + ++++ + F AL Sbjct: 48 KVYVVGTDAAYAPFELQNEKGEIVGFDIDVVTAIAAKAGIE---VKFVNTPWEGIFNALG 104 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 D L + T R+ + F + Q + ++ + L + VQ G Sbjct: 105 QGDRDALVSSITITEERK--QTMDFSAPYFDAQQLIAVKDTSKVAKFADLKKLKVGVQTG 162 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT + + + + FE ++ DA D + N Sbjct: 163 TTGDEVVTKLLGKN--STNIKRFESTPLALKELQSGGVDAVVADNGVVIHYVANNPADKF 220 Query: 214 HVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + + A+ +G+ E ++ A + A+ Sbjct: 221 KTVADNTSFAPEQYGIAVKKGNAELLEKINKGL-ADIKAD 259 >gi|317152557|ref|YP_004120605.1| family 3 extracellular solute-binding protein [Desulfovibrio aespoeensis Aspo-2] gi|316942808|gb|ADU61859.1| extracellular solute-binding protein family 3 [Desulfovibrio aespoeensis Aspo-2] Length = 261 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 80/252 (31%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + + + + A L +K G + ++ G F + + Sbjct: 1 MKTFLRSLAVLTVTVLLLGLAACADTETDSLQRVKNAGEISFAMSGGYPPFNFYSQDNEL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDVD R +++ + ++ + L+S D + + T + + Sbjct: 61 VGFDVDVAREVATRMG---LTLKPVTTEWSGIIEGLRSGVYDGILGSMAVTE--DRLKVV 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y+ G ++ ++ + + G + V GTT AD ++ Sbjct: 116 NFSTPYYYSGAQLMVKSGSPLALPADIKGRIVGVVTGTTF----ADDAAKLGAG-EVKLY 170 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + D D + + N + V L + +A A + DT Sbjct: 171 KDDTQTLTELSSGVVDGVITDR--VVGVNAMNSGKFDIVPLGAPLRSEDIAVAFNKDDTT 228 Query: 237 WYNIVSWTHYAM 248 V AM Sbjct: 229 LLAEVDRILAAM 240 >gi|212704998|ref|ZP_03313126.1| hypothetical protein DESPIG_03066 [Desulfovibrio piger ATCC 29098] gi|212671550|gb|EEB32033.1| hypothetical protein DESPIG_03066 [Desulfovibrio piger ATCC 29098] Length = 246 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 83/253 (32%), Gaps = 23/253 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M++ +++ L+++ + + L N + G+ Sbjct: 1 MFRKLTLTLCALMMMCTSVAAE------------TLVVATNCTYPPMEFLNDKKVPNGYS 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + + + + ++ + F L + D+L+ +T T R+ F Sbjct: 49 IAYATEVLKRAGYE---MELRDVAWDGIFAGLAAGNYDLLAASTTITPERQK--AFDFTE 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y Q +M K K I+S++ L G ++ Q G T L L + N+ ++ + Sbjct: 104 PYYGVVQAVVMPKGKKINSLADLKGLTVGSQIGITGVLVLQE----ANVGAKIREYDDIG 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A R DA D + I + + +G T+ N Sbjct: 160 LAFEDLAAGRVDAVICDDPVAKYYANKRTDFAGKFGIAYQHNNPEYFGFCVRKGRTDMLN 219 Query: 240 IVSWTHYAMVTAE 252 ++ A + A+ Sbjct: 220 RLNKAI-AEIKAD 231 >gi|312862681|ref|ZP_07722921.1| putative major cell-binding factor [Streptococcus vestibularis F0396] gi|311101541|gb|EFQ59744.1| putative major cell-binding factor [Streptococcus vestibularis F0396] Length = 277 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 101/254 (39%), Gaps = 21/254 (8%) Query: 3 KDFFVSILCLIILFF----TSFSTNASIL------GDIKKRGFLKCGINTGLVGFAEVKA 52 + +S++ + + +S + +S L I K+G L G+ + F A Sbjct: 8 RILAISVIAFVAVLLWNTKSSQADESSKLLNSAAIQKIVKKGTLNVGVKQDVPNFGYYSA 67 Query: 53 N-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++G ++D K+ + + + R + + ID+L T R+ Sbjct: 68 KTNTYQGMEID---LAKKIAKKLKVKVNFTAVTPQTREALMDNGTIDMLIATYTITDERK 124 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 S + Y+D GF++ K G +S L+G +I V G++ + + +Y A+N+K+ Sbjct: 125 ASYAM--SNPYYYDQIGFLVQTKSGYKKLSDLNGKTIGVSQGSSAKTAVEEYASANNLKF 182 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + E+ + A+R DA+ GD S L + + IL + A Sbjct: 183 DYVQLGSYPELAVSLYAYRIDAFAGDKSILSGYESDKTK-----ILDEGFKTQEYGIASS 237 Query: 232 QGDTEWYNIVSWTH 245 + + E + + Sbjct: 238 KSNQELIDYTNNLI 251 >gi|257884576|ref|ZP_05664229.1| extracellular solute-binding protein [Enterococcus faecium 1,231,501] gi|257887402|ref|ZP_05667055.1| extracellular solute-binding protein [Enterococcus faecium 1,141,733] gi|257895894|ref|ZP_05675547.1| extracellular solute-binding protein [Enterococcus faecium Com12] gi|257898520|ref|ZP_05678173.1| extracellular solute-binding protein [Enterococcus faecium Com15] gi|293377066|ref|ZP_06623276.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium PC4.1] gi|257820414|gb|EEV47562.1| extracellular solute-binding protein [Enterococcus faecium 1,231,501] gi|257823456|gb|EEV50388.1| extracellular solute-binding protein [Enterococcus faecium 1,141,733] gi|257832459|gb|EEV58880.1| extracellular solute-binding protein [Enterococcus faecium Com12] gi|257836432|gb|EEV61506.1| extracellular solute-binding protein [Enterococcus faecium Com15] gi|292644282|gb|EFF62382.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium PC4.1] Length = 278 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 77/255 (30%), Gaps = 12/255 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K +++ + ++ T A+ +++K+ L + L + + Sbjct: 1 MKKKRLFALITSVFFILSACGTAAANQEDHSWSNVEKKKELVVATSGTLFPASYYNDQNE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+DVD + ++ + KI + N + ++ + D + + T RE Sbjct: 61 LVGYDVDLAKEVAKRL---NVKISFKEYNVDGQITSVSKGESDFAANDFGITKEREKKFS 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 L+ FD GI S+ L G + T+ + H K Sbjct: 118 LSEPFKYSFDSMIVRKKDDSGIHSLDDLKGKKAAGEPNTSYMRL----AEKHGAKLVTYD 173 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + R D D ++ +++ + +G+ Sbjct: 174 NATNDQYLSDVANGRTDVILNDYYLQKMAVSALPDIPVKILENVYFNENESGFLLKEGND 233 Query: 236 EWYNIVSWTHYAMVT 250 + M Sbjct: 234 ALKKKIDGVLKEMKE 248 >gi|240850320|ref|YP_002971713.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Bartonella grahamii as4aup] gi|240267443|gb|ACS51031.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Bartonella grahamii as4aup] Length = 250 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 87/247 (35%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ +I + S N+ LK + F+ + +N + +GFD Sbjct: 1 MK---LLAGALIISATLFTLSANSQT---------LKIASDASYPPFSYIDSNNELQGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + + + L +K+ D + + T R + F Sbjct: 49 IDISYALCKKMNVE---CTIVTQDFEGMIPGLLAKKYDAIVSSLSPTKER--LQKIDFTD 103 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y I+ K GI S G ++ VQ+ TT D++ + + + ++ Sbjct: 104 PYYNTVLAVIVTKNSGIKEISTQNFRGKNLGVQSNTTQAAYAEDHYAS--ERVNIKLYPT 161 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E + +HR D D + ++ +K P+A A+ Q + + Sbjct: 162 AIEANRDLLSHRLDIIIFDKLKALNWLENEGKDCCILLGTLEETKFPVAIALRQNNNDLK 221 Query: 239 NIVSWTH 245 N + Sbjct: 222 NSFNKAI 228 >gi|159905831|ref|YP_001549493.1| extracellular solute-binding protein [Methanococcus maripaludis C6] gi|159887324|gb|ABX02261.1| extracellular solute-binding protein family 3 [Methanococcus maripaludis C6] Length = 254 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 99/256 (38%), Gaps = 13/256 (5%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + ++ LII F+ ++ + D K G L GI GL +G+ KG Sbjct: 1 MKIPEILVITAAILIITSFSGCISSYGLESDTVKPGVLTVGITPGLPPLEYY-EDGELKG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +D+D + ++ + K+++ + + AL + +ID + + E + F Sbjct: 60 YDIDLMKEIAHQMG---LKLEFKVYSYEGAEKALLNGEIDCIPSTA---VSPERKEKMDF 113 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + ++ + L+G ++ V T +E Y + + + ++ Sbjct: 114 SRAYIQTYMVIAVFERSSYHEIKDLNGKNVAVLKNTYSEDWADRYLGS--IDANIKPYDS 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 V+ + + ++ DA D ++ T + + + I+ + A A+ + + Sbjct: 172 VDVLMSDVQSGNLDAVVTD--QIHLDYYTKMNNVDSRAISEKITIAYWAIALKKDNKGLQ 229 Query: 239 NIVSWTHYAMVTAEEL 254 N ++ + + E L Sbjct: 230 NKINDALFELEEDEAL 245 >gi|307299194|ref|ZP_07578995.1| extracellular solute-binding protein family 3 [Thermotogales bacterium mesG1.Ag.4.2] gi|306914990|gb|EFN45376.1| extracellular solute-binding protein family 3 [Thermotogales bacterium mesG1.Ag.4.2] Length = 240 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 73/208 (35%), Gaps = 11/208 (5%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 G + F V NG++ GFD+D +A++ + +I+ ++ AL S Sbjct: 24 VVGTSADFPPFEYV-ENGEFVGFDIDLIKAIAEEM---DFEIEIRDMSFDSLIAALASGN 79 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 IDI+ T RE ++F + Q ++ ++ +I VQ GTT Sbjct: 80 IDIVISGMTITPEREEV--VSFSKPYWTADQSVVVRDDSELTVTVLFGKHNIGVQTGTTG 137 Query: 157 ELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 +L + D + ++ DA D + Sbjct: 138 DLWVEDNLVKTKILTGDFKRYDTYVLAMTDLVNKNIDAIVLDAPVAESFAKVRP----VK 193 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSW 243 I+ I + A+ + + + N+++ Sbjct: 194 IVGVIKTYEDYGIAVNKSNKDLLNLINE 221 >gi|288561201|ref|YP_003424687.1| amino acid ABC transporter substrate-binding protein [Methanobrevibacter ruminantium M1] gi|288543911|gb|ADC47795.1| amino acid ABC transporter substrate-binding protein [Methanobrevibacter ruminantium M1] Length = 273 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 38/255 (14%), Positives = 83/255 (32%), Gaps = 15/255 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRG-----FLKCGINTGLVGFAEVKAN 53 M + + L + +++ D G G N+ F N Sbjct: 1 MKRSIIFLTIILSLFLVIGYASAGLFDFSSDDAGSGENTDDVFVVGFNSQFPPFGYK-EN 59 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G++ GFD++ + ++ + ++ + L S ++D + + Sbjct: 60 GEYTGFDIELAKEVARRNNWTFKPVPI--IDWNTKRFELDSNEVDCIWSEFTIDGRED-- 115 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + + + I+ I+ + L G ++ VQ G++ T+ Sbjct: 116 -DYTWSQPYFNNTKLVIVRGDSDINDLDDLKGKTLEVQQGSSILNTIEKNETLKRKFAKI 174 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + + CD D L +++ ++ IL IS A +G Sbjct: 175 EQVDGYDTAFMDLESGVCDVIIIDSGL--GRYLVSEKHNDTKILNQTISNEKYGVAFEKG 232 Query: 234 DTEWYNIVSWTHYAM 248 +TE + V T M Sbjct: 233 NTELRDKVQKTLDEM 247 >gi|206564458|ref|YP_002235221.1| putative periplasmic lysine-arginine-ornithine-binding protein [Burkholderia cenocepacia J2315] gi|198040498|emb|CAR56483.1| putative periplasmic lysine-arginine-ornithine-binding protein [Burkholderia cenocepacia J2315] Length = 260 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 43/255 (16%), Positives = 90/255 (35%), Gaps = 23/255 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ + + +L ++ S A K ++ G++ F A+G GFD Sbjct: 1 MKK--ILAAVTVALLAVSAGSAYA------KDWSTVRFGVDASYPPFESKGADGKVVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + +K ++ + AL++++ D + + T R+ + F Sbjct: 53 VDLGNEICRRM---NAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPARQEQIA--FSA 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K G+ + L G S+ V+ GT E Y+ + + + ++ Sbjct: 108 KLFNTPTRLVTKKGTGLMPTAESLKGKSVGVEQGTIQETYAKTYWASKG--VNVVPYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL------APAIIQG 233 +++ A + R D D L R + P + + Sbjct: 166 DQVYADLISGRLDGALQDAVQAEIGFLKTPRGANFDFAGK-DLDDPKTLGNGAGIGLRKE 224 Query: 234 DTEWYNIVSWTHYAM 248 DT+ + AM Sbjct: 225 DTDLKAKIDGAIAAM 239 >gi|239813180|ref|YP_002942090.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239799757|gb|ACS16824.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 246 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 85/247 (34%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF-LKCGINTGLVGFAEVKANGDWKGF 59 M + L L F F+ A + +G L+ + V NG GF Sbjct: 1 MNTRRTLVAAALSSLAFFGFAATA------QAQGEPLRVATDATFPPMEFV-ENGKRTGF 53 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ A+ + I+++ ++ K L SK+ D+ T R + F Sbjct: 54 DVELVEAIGKTLGRK---IEWIDIDFKGLVPGLISKRFDMAVSAIYITDERRKV--VDFT 108 Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ I + + ++G + VQ GT + + F + + E+ Sbjct: 109 VPYYAGGLVVMVKDGNTAIKAPADINGKKVSVQVGTKSVAYTKEKFP----QVQLMEVEK 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E+ R DA A Y T +LP+ I+ AI + E Sbjct: 165 NQEMFNLVDIGRADAAVTGKPAAYQYVRTRGG---LKVLPEQITTEEYGMAIRKDTPELT 221 Query: 239 NIVSWTH 245 V+ Sbjct: 222 KAVNGAI 228 >gi|70733919|ref|YP_257559.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] gi|68348218|gb|AAY95824.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] Length = 265 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 83/230 (36%), Gaps = 14/230 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A + D KRG LK G++ + F G+ GF+VD +A++ ++ ++ Sbjct: 20 TAQAGAIDDAVKRGTLKVGMDPTYMPFEMTNKRGEIIGFEVDLLKAMAKSMGVK---LEM 76 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--IS 138 + AL + + D++ T R +L L F GQ ++ K I Sbjct: 77 VSTGYDGIIPALLTDKFDMIGSGMTLTQER--NLRLNFSEPFIVVGQTLLIRKDLEGTIK 134 Query: 139 SVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 S L+ I + GTT E+ ++ +E + DA+ Sbjct: 135 SYKDLNSADYRITSKLGTTGEMVAKKLIAKAKYHG----YDNEQEAVLDVVNGKADAFIY 190 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 D V L + PLA + +GD + N ++ + Sbjct: 191 DAPYNVVAVNKVGNGK-LVFLDKPFTYEPLAFGLKKGDYDSINFINNFLH 239 >gi|261340703|ref|ZP_05968561.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Enterobacter cancerogenus ATCC 35316] gi|288317119|gb|EFC56057.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Enterobacter cancerogenus ATCC 35316] Length = 260 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 94/279 (33%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ ++ +++ + L ++ G + F+ A G++ GFD Sbjct: 1 MKKTVLALSL---LVGLSAAASSYAALPQ-----TVRIGTDATYAPFSSKDAKGEFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVGSDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFSE 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E ++ + + ++ Sbjct: 108 KLYAADSRLIAAKGSPIQPTIDSLKGKHVGVLQGSTQEGYANANWREKGVD--VVPYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + A R DA D A L E+ + + + D Sbjct: 166 DLIYSDLTAGRLDAAFQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGIGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE EL ++++K + +V Sbjct: 226 TELKAAFDKAFT------ELRKDGT-YDKLAKKYFDFNV 257 >gi|83748399|ref|ZP_00945422.1| ABC transporter amino acid-binding protein [Ralstonia solanacearum UW551] gi|207738969|ref|YP_002257362.1| substrate-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] gi|83724915|gb|EAP72070.1| ABC transporter amino acid-binding protein [Ralstonia solanacearum UW551] gi|206592340|emb|CAQ59246.1| substrate-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] Length = 254 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 76/218 (34%), Gaps = 13/218 (5%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +I++ G L F + GF+++ +A+ + I++ L+ Sbjct: 26 EEIQQSGKLIVATGGEFPPFNYFAGS-KLTGFEIEVAQAVVKKMG---LAIEWKTLSFDS 81 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 LQ + D++ + T R + F Y G + I + + L+G Sbjct: 82 LLAGLQQNRWDLVISSHGVTEERAK--AVDFTTPHYCSGSSIVAR-DPAIRTAADLTGKV 138 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + VQ G+T + K F + + A + R DA+ D AL Sbjct: 139 VAVQTGSTYLENVRKLAKPR----EIKNFPQDRDARTALSSGRADAWVTDK--FVALAAI 192 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 P ++ L + +A A+ +G+T + Sbjct: 193 QSNPEANLKLGSPLFVERIAAAVAKGNTALAAHYNKAL 230 >gi|121606331|ref|YP_983660.1| extracellular solute-binding protein [Polaromonas naphthalenivorans CJ2] gi|120595300|gb|ABM38739.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 285 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 62/217 (28%), Gaps = 7/217 (3%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G + F G+ GFD+D +A + + ++++ + F ++ Sbjct: 48 KVYVVGTDAAYAPFESQNEKGEIVGFDIDVVKAAAQKAGIE---VKFVNTPWEGIFNSVA 104 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 D+L T R L F + Q + I+ L + VQ G Sbjct: 105 QGDRDLLVSAITITPER--RQTLDFSAPYFDAQQLIAVKSDSKIAKFDDLKKLKVGVQNG 162 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT + + + FE DA D + N Sbjct: 163 TTGDEVITKL--QGKDSPNVKRFESTPLALKEMEGGGVDAVVADNGVVVHYVANNPGSKF 220 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 I + A+ +G+ E ++ + Sbjct: 221 KTIADSTFAAEQYGIAVKKGNAELLEKINQGLAGIKE 257 >gi|331007213|ref|ZP_08330422.1| Hypothetical Protein IMCC1989_1214 [gamma proteobacterium IMCC1989] gi|330418980|gb|EGG93437.1| Hypothetical Protein IMCC1989_1214 [gamma proteobacterium IMCC1989] Length = 532 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 99/265 (37%), Gaps = 18/265 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M F ++ F + + + + L IK RG + G+ +A A+G+ G Sbjct: 1 MIIRFSHLLILFSFFFTNALAASDSPRLDLIKSRGAVIVGVKNDYPPWAYYDASGNLVGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VD + ++ + ++ + + R L+ IDI+ T R G+ Sbjct: 61 EVDLAQDIADRLG---VSLKLQAVTSSNRISQLEQGSIDIIIATMGDTAKRRQQTGII-E 116 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 P Y G ++HKK + S ++L G S+C+ T L + F P +E Sbjct: 117 PSYYSSGATILIHKKSPLKSWAELYGKSVCLTKNTYLNRDLIERF-----LLKPQKYEGT 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY- 238 + AA + +C + D +AL L R + D I P A+ + + + Sbjct: 172 LDNMAALQFGKCSGWIYDDTAL-TRLLQEPRWQDFKAPLDSIMLIPWTLAVKKSEKDSTL 230 Query: 239 ------NIVSWTHYAMVTAEELGIT 257 ++ W + A E Sbjct: 231 GLLVSDAVIDWHRTGKILALEEKWK 255 >gi|116254187|ref|YP_770025.1| solute-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115258835|emb|CAK09941.1| putative solute-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 265 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 90/260 (34%), Gaps = 12/260 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + + + + A L DIK G + GI + F+ A+ KG+D Sbjct: 5 MKLRY-TATAAIAVFGILAGAAQADELADIKAAGEINIGIFSDFPPFSSASADMSIKGYD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + + + + + R L ++D+L +E + + F Sbjct: 64 VDVAQKIADGLGVK---LNLVSVTGQNRIAYLNDDRVDLL---MSVGYSKERAEVIDFAA 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I +S L+ S+ V GT + +L FE Sbjct: 118 PYAPYYIAVIGPAALKVSGKEDLADKSVAVNRGTLEDTSLTAVAP---GSAAIQRFENYN 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A+ + + + D + S S +A + +G+ + Sbjct: 175 SVIQAFISGQTQLMVVGNDVGAQVLARQDELKPEQKFQLLSSPSHIA--LRKGEEGLKKV 232 Query: 241 VSWTHYAMVTAEELGITQKN 260 V+ + AM++ L + K+ Sbjct: 233 VNDSVAAMISNGSLDASSKS 252 >gi|328950984|ref|YP_004368319.1| ABC-type transporter, periplasmic subunit family 3 [Marinithermus hydrothermalis DSM 14884] gi|328451308|gb|AEB12209.1| ABC-type transporter, periplasmic subunit family 3 [Marinithermus hydrothermalis DSM 14884] Length = 254 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 35/235 (14%), Positives = 72/235 (30%), Gaps = 14/235 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + L I+ G + G F G+ GFD++ +AL+ + Sbjct: 15 ASLGLAQRFRSLDQIQADGTIVIGTEGAFPPFNFFDE-GNLVGFDIEIGQALAERLGVKY 73 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 + +AL + D + + T R + + F Y G + Sbjct: 74 E---WKAQAFDTLLIALNQGRFDFVIASHTITPER--AQAVDFTKPYYCTGNLIVAL-PG 127 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 G + +L G + VQ GTT ++ + R DA+ Sbjct: 128 GPRTPEELKGKVVGVQVGTTYFEYAQTIEGIK----EIKTYQTNPDALQDLLNQRIDAWI 183 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 D + + L D++ + + A+ +G+ ++ ++ Sbjct: 184 TDQF---TALEAMKQRDVELQLSDLLVREEIGIAVAKGNETLLAALNNALDEILA 235 >gi|319744949|gb|EFV97279.1| polar amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus agalactiae ATCC 13813] Length = 261 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 72/242 (29%), Gaps = 12/242 (4%) Query: 12 LIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 +IIL S +K + G + V +GD+ GFD+D A+ Sbjct: 1 MIILSACGMSNKEMAGIDNWEHYQKEKKITIGFDNTFVPMGFESRSGDYTGFDIDLANAV 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 +++ P+N + L + ID++ T R +AF + Q Sbjct: 61 FKEYG---ISVKWQPINWDMKETELNNGNIDLIWNGYSKTAERAK--KVAFTNPYMNNHQ 115 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEIDA 184 + I+S+ + G + Q+G++ D K + ++ + Sbjct: 116 VIVTKTSSHINSIKDMKGKKLGAQSGSSGFDAFNAKPDILKKFVKGKEAVQYDTFTQALI 175 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + +R D D + + + D ++ Sbjct: 176 DLKNNRIDGLLIDEVYANYYLKQEGNIKAYYFVKTAYQGENFVVGARKVDRRLIEKINKA 235 Query: 245 HY 246 Sbjct: 236 FK 237 >gi|319777992|ref|YP_004134422.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171711|gb|ADV15248.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 277 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 75/241 (31%), Gaps = 21/241 (8%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + ++L + G LK + + + A+ + GFD+D + + I +++ Sbjct: 23 AQAGAVLDRVVAAGTLKVATDANWAPQSFLNASNELDGFDIDVAKEIGKRIGVK---VEF 79 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + D+ + T R F + Y+ +HK S+ Sbjct: 80 VTPGWDIITAGNWVGRWDMHVGSMTPTKKRAEI--FDFPAVYYYTPAAVAVHKDSKAKSL 137 Query: 141 SQLSGASICVQAGTTTELTLAD----------YFKAHNMKYHPIVFERVEEIDAAYRAH- 189 S L+G + +T E F+ +E R Sbjct: 138 SDLNGKVVGATTTSTFEAYAKKDLTLDAAGAPPFEYKLNPKEVHSYENSTTAFDDLRVGD 197 Query: 190 --RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 R DA ++ + D + PLA AI GD E+ ++ A Sbjct: 198 GVRLDAVVSSQPSIVD---AVKAGYPIRQIGDPVFYEPLAVAIEHGDPEFSARIADAVKA 254 Query: 248 M 248 M Sbjct: 255 M 255 >gi|328957593|ref|YP_004374979.1| high affinity arginine ABC transporter binding lipoprotein [Carnobacterium sp. 17-4] gi|328673917|gb|AEB29963.1| high affinity arginine ABC transporter binding lipoprotein [Carnobacterium sp. 17-4] Length = 507 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 95/257 (36%), Gaps = 21/257 (8%) Query: 1 MYKDFFVSILCLIILFFTSFS-----TNASI-LGDIKKRGFLKCGINTGLVGFAE---VK 51 M K+ F I+ ++ F F+ + A L D++++G L G + + V Sbjct: 17 MKKNSFYLIVLSLLTVFGLFAPVETVSAADTGLEDVQEKGTLVIGTSADFPPYEFHSTVD 76 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+ + ++ + + ++ + AL+S+++D++ T R+ Sbjct: 77 GKDTIVGMDISIAQKIAEDLGVE---LKIEDIGFDSLLPALESEKVDMVISGMSPTDERK 133 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + F + Y GQ ++ ++V L+G + VQ G+ E + Sbjct: 134 K--SVEFSDVYYTGGQNIVVRDADKEIYTNVDDLTGMKVGVQTGSLQETLAKEQMP---- 187 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAP 228 + ++ ++ A + ++ +A + + A +D+ + A Sbjct: 188 DSELLSLSKITDLILALKTNKIEAILMEKPSAEAYIGNDDQLVTFDGGFLLEDGEQGSAI 247 Query: 229 AIIQGDTEWYNIVSWTH 245 A + + V+ + Sbjct: 248 AFKKDTQSLVDAVNASL 264 >gi|326561454|gb|EGE11804.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis 46P47B1] Length = 265 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 85/251 (33%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGF 59 M F ++ I+ F+ + + K G L+ F +G GF Sbjct: 1 MKFKTF-GLMAAIVGTFSISACSGQNEQSTKASGDTLRIATEGTYAPFNYTNPDGSLGGF 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD AL + + ++ Q + + AL++ + D + T R S + F Sbjct: 60 DVDIANALCNKM---QTECQIIAQDWDGIIPALKTGRFDAIVAAMSVTPER--SEQVDFS 114 Query: 120 PITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + + F+ K S ++ A I Q T + L + P +++ Sbjct: 115 EPYFVNSLVFLAKKGSNFDPSSTDAINNAKIVAQRSTISSQWLTQTYP----NSKPQLYD 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 ++ R DA D ++ + + DI ++ A+ +G+T Sbjct: 171 TLDNAFIDLGNERADAMISDKLPALTWLSSDLGQNFEIKGGDININDKVSIAVDKGNTAL 230 Query: 238 YNIVSWTHYAM 248 + A+ Sbjct: 231 LQKFNEALAAI 241 >gi|311278681|ref|YP_003940912.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] gi|308747876|gb|ADO47628.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] Length = 260 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 89/258 (34%), Gaps = 23/258 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + LI + SF+ + + ++ G++ F +G GFD Sbjct: 1 MKKQLIPLLFTLISVSGASFAGSIT---------EIRFGVDPTFPPFESKTTDGHIVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +K ++ N AL++K+ D + T R+ L F Sbjct: 52 IDLGNAICQKL---QAKCSWVESNFDGIIPALKAKKFDAILSAMYVTEKRKE--QLTFSD 106 Query: 121 -ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I + L +I V+ G+ E Y++ + + ++ Sbjct: 107 KIYSGPIFVVARKNTITATDAGALKNKTIGVEQGSVQETYANKYWRNAG--VNVVAYQGA 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 ++I + R DA L ++ + + + + L A + + D Sbjct: 165 DQIIPDLESGRIDAAALAGVMAEYSFLNKEQGKDFTFVGNALQDKTLFTNGDAIGLRKED 224 Query: 235 TEWYNIVSWTHYAMVTAE 252 TE ++ A + A+ Sbjct: 225 TELQQAINGAI-AQIIAD 241 >gi|330873260|gb|EGH07409.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 273 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 38/257 (14%), Positives = 79/257 (30%), Gaps = 21/257 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I L+ L ++ + + L ++K L + F+ + + GFD Sbjct: 1 MNYRALLGI-GLVTLAASTQALAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ + ++ + S + DI + + R Sbjct: 60 VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174 + I S L+G + + + ++ E L + P+ Sbjct: 116 YYASPAVIVVNATDDRIHSAKDLTGKKVGLTSASSYESFLNKNLVIDGAEDKPLQYPFDD 175 Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 ++ R DA + L K D+ + + + + P + Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGETLYEEPNS 232 Query: 228 PAIIQGDTEWYNIVSWT 244 AI + D EW V Sbjct: 233 VAIEKDDPEWDAKVREV 249 >gi|86360923|ref|YP_472810.1| amino acid ABC transporter substrate-binding protein [Rhizobium etli CFN 42] gi|86285025|gb|ABC94083.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 277 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 82/265 (30%), Gaps = 23/265 (8%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + L I+ + ++L + LK + + + + G Sbjct: 1 MNRLTKMTAAAASLAIVLAAVPANAGAVLDRVMADKDLKVATDANWAPQSFMNDKNELDG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D + + + ++++ + + D+ + T R F Sbjct: 61 FDIDVAKDIGRRLGVK---VEFVTPGWDIITAGNWAGRWDMHVGSMTPTKKRAEI--FDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL-------ADYFKAHNMKY 171 + Y+ HK + +S L G + A +T E A A ++ Sbjct: 116 PAVYYYTPAAVAAHKDSKATKLSDLDGKVVGTTATSTFEAYAKGDLTLDAAGAPAFKYEF 175 Query: 172 HPIVFERVE---EIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 P + R R DA + ++ + D + P Sbjct: 176 KPKEVKSYANSSTAFDDLRLGDGTRLDAVVSSLP---SILDAVKAGYPIKQIGDPVFYEP 232 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVT 250 LA AI GD E+ + ++ AM Sbjct: 233 LAVAIEHGDKEFNDKIAEAVKAMQA 257 >gi|227504864|ref|ZP_03934913.1| glutamate-binding protein GluB [Corynebacterium striatum ATCC 6940] gi|227198555|gb|EEI78603.1| glutamate-binding protein GluB [Corynebacterium striatum ATCC 6940] Length = 295 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 83/272 (30%), Gaps = 24/272 (8%) Query: 7 VSILCLIILFFTSFSTNASI--------LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 S + + ++ L I + G + G G + +G G Sbjct: 13 TSAVLASGALLAACGGSSDSAPGEGEGLLAHI-ESGNVTLGTKFDQPGLGLREGDGSMSG 71 Query: 59 FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 DVD ++ KI++ + +R +++ Q+D+++ R Sbjct: 72 LDVDVATYVVNHIAKEKGWAEPKIEWKETPSAQRETLIENGQVDMIAATYSINASRAE-- 129 Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F Q ++ I + L G +C G+T + + + Sbjct: 130 KVNFGGPYLVTHQALLVSADNAEIKGLDGLDGKILCSVTGSTPAQKVKEALPS----VQL 185 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL---PDIISKSPLAPAI 230 F+ A DA T D + L N+ + V L + + Sbjct: 186 QEFDTYSSCVEALSQGTIDAMTTDATILNGYAAQNEGKFKVVELEKDGKPFTDEYYGIGL 245 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELG-ITQKNI 261 + D E ++ M ++ E + N+ Sbjct: 246 AKDDQEATEAINAALKEMHSSGEFDKLVSANL 277 >gi|161524065|ref|YP_001579077.1| cationic amino acid ABC transporter periplasmic binding protein [Burkholderia multivorans ATCC 17616] gi|160341494|gb|ABX14580.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia multivorans ATCC 17616] Length = 258 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I ++ + Sbjct: 20 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRIGVK---CVWVAQDLDGIIP 76 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149 AL++K+ DI+ + T R + F Y I + +V+ L G + Sbjct: 77 ALKAKKYDIIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKAGSPLQPTVASLKGKRVG 134 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E Y++ I ++ +++ A + R DA D L Sbjct: 135 VEQGSTQETYAKTYWEPQG--VTIIPYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 192 Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245 R K P A + + DT+ ++ Sbjct: 193 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKIRINKAL 233 >gi|330816087|ref|YP_004359792.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia gladioli BSR3] gi|327368480|gb|AEA59836.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia gladioli BSR3] Length = 265 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 82/255 (32%), Gaps = 22/255 (8%) Query: 1 MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + + T +A+ L I + G+ F +G Sbjct: 1 MKLNWRKMAAGAVATAAAMSTLSGASAADLKQI------RFGVEASYAPFEYKLPDGKLA 54 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D A+ + + K ++ + ALQ+++ D ++ + T R+ +A Sbjct: 55 GFDIDVGNAVCAKL---KVKCVWVENDFDGLIPALQARKFDAINSDMTITDQRKK--AIA 109 Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y I K G + + + L G + V GT E + + + Sbjct: 110 FTDPIYSIPNQLIAKKGSGLLPTPASLKGKRVGVLQGTIQESYAKARWAPAG--VEVVPY 167 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALY-ALKLTNDRPSEHVILPDIISKSPL----APAII 231 + + ++ R DA D A P ++ L + Sbjct: 168 QTQDLAYEDLKSGRLDATFQDSEAAAKGFLAKPQAAGFAFAGPQVVDAEILGSGVGFGLR 227 Query: 232 QGDTEWYNIVSWTHY 246 + DT+ N ++ Sbjct: 228 KNDTDLRNAINGALK 242 >gi|309784980|ref|ZP_07679613.1| lysine-arginine-ornithine-binding periplasmic protein [Shigella dysenteriae 1617] gi|308927350|gb|EFP72824.1| lysine-arginine-ornithine-binding periplasmic protein [Shigella dysenteriae 1617] Length = 260 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 96/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L++ + S+ A++ ++ G +T F+ A GD+ GFD Sbjct: 1 MKK--LILALSLLVGLSAAASSYAALPE------TVRIGTDTIYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E + +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANESWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L + + + + D Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257 >gi|229589724|ref|YP_002871843.1| putative ABC transporter exported solute-binding protein [Pseudomonas fluorescens SBW25] gi|229361590|emb|CAY48467.1| putative ABC transport system, exported solute-binding protein [Pseudomonas fluorescens SBW25] Length = 283 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 90/247 (36%), Gaps = 10/247 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDV 61 K L + S + + L I++R + G+ F + G+ +G++V Sbjct: 8 KALASLCLAGALASGASLARADATLDKIEQRHVINIGVMLSGPPFGTIDPKTGEHQGYNV 67 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + + ++ A+ + + + + A R LQ ++DIL N +T R L P Sbjct: 68 ELAKGVAKALGVEANTVS---VLAPNRVQFLQQGKVDILIANMQFTEERGEILDYVPTP- 123 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G ++ K GI+ + L G +CV G+ L + + A F E Sbjct: 124 YEEVGGAALIRKGSGITQWADLKGKPVCVSQGSNFIKPLQETYGA-----QIKAFRSQSE 178 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + R + C A ++AL + + LP + S + +G+ + + Sbjct: 179 SLLSLRGNGCVAAVHVSPTMHALLSDAEWAGYEIPLPGDLIPSNSVIWLRKGEHDTQAKL 238 Query: 242 SWTHYAM 248 Sbjct: 239 DAIVRDW 245 >gi|258654113|ref|YP_003203269.1| family 1 extracellular solute-binding protein [Nakamurella multipartita DSM 44233] gi|258557338|gb|ACV80280.1| extracellular solute-binding protein family 3 [Nakamurella multipartita DSM 44233] Length = 321 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 71/202 (35%), Gaps = 8/202 (3%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G + GI G +G + GFDV+ + ++ + I ++ + ER + Sbjct: 84 GKVTVGIKFDQPGLGLKNPDGSFSGFDVEVAKYVAGKLGVPEGGITFVESKSAEREGLID 143 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQA 152 ++D + T R+ + F + Q ++ I+ ++G +C Sbjct: 144 RGEVDYIVATYSITDARKE--KVNFAGPYFIAAQDLLVKSDNTDITGPEAMAGKILCSVT 201 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T+ + D + A + E A R+ DA T D L P Sbjct: 202 GSTSAQKVKDNYAA---DVALQEYGTYTECVEALRSGAVDAVTTDNVILAGYAAQY--PG 256 Query: 213 EHVILPDIISKSPLAPAIIQGD 234 E ++ S + +GD Sbjct: 257 ELKVVGKGFSTENYGIGLKKGD 278 >gi|15600346|ref|NP_253840.1| amino acid (lysine/arginine/ornithine/histidine/octopine) ABC transporter periplasmic binding protein [Pseudomonas aeruginosa PAO1] gi|107104253|ref|ZP_01368171.1| hypothetical protein PaerPA_01005327 [Pseudomonas aeruginosa PACS2] gi|116053300|ref|YP_793624.1| putative periplasmic binding protein [Pseudomonas aeruginosa UCBPP-PA14] gi|152987515|ref|YP_001351209.1| putative periplasmic binding protein [Pseudomonas aeruginosa PA7] gi|218894253|ref|YP_002443122.1| putative periplasmic binding protein [Pseudomonas aeruginosa LESB58] gi|254238144|ref|ZP_04931467.1| hypothetical protein PACG_04266 [Pseudomonas aeruginosa C3719] gi|254243966|ref|ZP_04937288.1| hypothetical protein PA2G_04796 [Pseudomonas aeruginosa 2192] gi|296392007|ref|ZP_06881482.1| putative periplasmic binding protein [Pseudomonas aeruginosa PAb1] gi|313110214|ref|ZP_07796111.1| putative ABC transporter, periplasmic amino acid-binding protein [Pseudomonas aeruginosa 39016] gi|9951454|gb|AAG08538.1|AE004928_4 amino acid (lysine/arginine/ornithine/histidine/octopine) ABC transporter periplasmic binding protein [Pseudomonas aeruginosa PAO1] gi|115588521|gb|ABJ14536.1| putative ABC transporter, periplasmic amino acid-binding protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126170075|gb|EAZ55586.1| hypothetical protein PACG_04266 [Pseudomonas aeruginosa C3719] gi|126197344|gb|EAZ61407.1| hypothetical protein PA2G_04796 [Pseudomonas aeruginosa 2192] gi|150962673|gb|ABR84698.1| probable periplasmic binding protein [Pseudomonas aeruginosa PA7] gi|218774481|emb|CAW30298.1| probable periplasmic binding protein [Pseudomonas aeruginosa LESB58] gi|310882613|gb|EFQ41207.1| putative ABC transporter, periplasmic amino acid-binding protein [Pseudomonas aeruginosa 39016] Length = 250 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 67/205 (32%), Gaps = 9/205 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 L+ G F + A+G GFD+D +AL + + ++ + + + A Sbjct: 23 AADKLRIGTEGAYPPFNGIDASGQAVGFDLDIGKALCAKM---KTECEVVTSDWDGIIPA 79 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICV 150 L +K+ D + + T R+ + F Y + F+ K + L G I Sbjct: 80 LNAKKFDFIVASMSITDERK--QAVDFTDPYYTNKLQFVAPKSVDFKTDKDSLKGKVIGA 137 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q T L D +++ E + R D D Y ++ Sbjct: 138 QRATIAGTWLEDNMA---DVVTIKLYDTQENAYLDLSSGRLDGVLADKFVQYDWLKSDAG 194 Query: 211 PSEHVILPDIISKSPLAPAIIQGDT 235 + + A+ +GD Sbjct: 195 KEFEFKGEPVFDNDKIGIAVRKGDP 219 >gi|308187461|ref|YP_003931592.1| ABC transport system, periplasmic solute-binding protein precursor [Pantoea vagans C9-1] gi|308057971|gb|ADO10143.1| Putative ABC transport system, periplasmic solute-binding protein precursor [Pantoea vagans C9-1] Length = 263 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 91/241 (37%), Gaps = 21/241 (8%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 L + ++ +F+ A I++ ++ ++ F G GFD+D AL + Sbjct: 12 LAVAVMAGCTFAAQA----KIEQ---VRFAVDPTYPPFESKTPQGKLVGFDIDLGNALCT 64 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + +K ++ AL++++ D + + T R + F Y Sbjct: 65 QM---QAKCVWVESQFDGMIPALKARKFDAILSDMGITEER--LKQIDFTVPLYDTHTQL 119 Query: 130 IMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 I K GI +V L G ++ V+ GT E ++ + + + ++++ + Sbjct: 120 IARKGAGILPTVESLKGKTVGVEQGTVQERYALAKWQPYG--VTVVPYGDQAQVESDLVS 177 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSW 243 R DA D + L + + + L I + P+ A + +GDTE + Sbjct: 178 GRLDAVFTDAAQAAIGFLKHPQGKDF-ELAGPIIQDPIIGPGTAIGLRKGDTELKTALDN 236 Query: 244 T 244 Sbjct: 237 A 237 >gi|289804383|ref|ZP_06535012.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 200 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 75/215 (34%), Gaps = 16/215 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + + + ++ G +T F+ A GD+ GFD Sbjct: 1 MKKTVLALSLLIGLGATAASYAALPQ--------TVRIGTDTTYAPFSSKDAKGDFIGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I ++ L G + V G+T E D ++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + I + A R DA D A L E+ Sbjct: 166 DLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEY 200 >gi|70729728|ref|YP_259467.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] gi|68344027|gb|AAY91633.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] Length = 262 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 73/227 (32%), Gaps = 11/227 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L I++ ++ ++ F+ GFD AL+ + + + Sbjct: 29 DDLQSIRESREIRIAMSGQYSPFSFANEQNQIVGFDASISEALAQRLGVK---VSIVTTP 85 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 L +K+ D + + T R + F Y G+ ++ + I+S++ L Sbjct: 86 FDGIIAGLLAKKYDAIIASMTITPERLR--AVDFVGPYYHAGRTIVVKEDSPINSLADLK 143 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI-SALYA 203 ++ V T D + ++ + E+ A R DA D L A Sbjct: 144 DVTVGV-----TLGDAHDKWARARGNLKVKTYKGLPEMLVDLEAGRLDALVMDSVPVLVA 198 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 +K T + + A+ + + E + M+ Sbjct: 199 VKETGQKVRIITPPDSDGGVEGMGIALRKNNPELKAAMQQALNDMLA 245 >gi|84393206|ref|ZP_00991969.1| cyclohexadienyl dehydratase precursor [Vibrio splendidus 12B01] gi|84376172|gb|EAP93057.1| cyclohexadienyl dehydratase precursor [Vibrio splendidus 12B01] Length = 254 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 90/250 (36%), Gaps = 14/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S+L I S A L DI+K G L+ G F+ + G+D Sbjct: 1 MKK---TSLLLASITLALSGVVQADQLEDIQKSGTLRVGTTGDYKPFSYFDGK-TYSGYD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + + +Q + K+ L S + DI + R+++ Sbjct: 57 IDVAKHVAEQLGVE---LQIVRTTWKDLLTDLDSDKYDIAMGGITRKMQRQLNAEQTQGY 113 Query: 121 ITYFDGQGFIMHKKKGISSVS--QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 +T+ K + +S+ LS + V G T E+ + A+ +E Sbjct: 114 MTFGKCFLVAKGKAEQYNSIEKVNLSSVRVGVNIGGTNEM----FADANLQDASFTRYEN 169 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++ A + D + ++T++R E + S I +G+ Sbjct: 170 NLDVPQAVAEGKVDVMVTETPEGLFYQVTDER-LEAARCETPFTNSQFGYLIPKGEQRLL 228 Query: 239 NIVSWTHYAM 248 N V++ M Sbjct: 229 NTVNFIMDEM 238 >gi|254229406|ref|ZP_04922822.1| arginine-binding periplasmic protein 1 [Vibrio sp. Ex25] gi|262396866|ref|YP_003288719.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio sp. Ex25] gi|151938097|gb|EDN56939.1| arginine-binding periplasmic protein 1 [Vibrio sp. Ex25] gi|262340460|gb|ACY54254.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio sp. Ex25] Length = 247 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 84/258 (32%), Gaps = 21/258 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L + + +K + F + N +GFD Sbjct: 1 MKKILLASLIGLSSATMAANAAAQE---------EIKFAMEATYAPFEYMDENNQIQGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + + AL+ K+ D D T R + F Sbjct: 52 VDLANALCKEM---EAKCTFHNQSFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFTN 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ K+ + L G + VQ G+T + L + + + + Sbjct: 107 AYYENSAAFVSIKE-KAADQKALEGKRVGVQNGSTHQSYLIEQMP----GVTAVPYSSYQ 161 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238 + + R D+ GD + + D + + + A+ +G+ E Sbjct: 162 DAFIDMKNGRIDSVFGDTAVVAEWFKKEDNLAYVGEHVTNPKYFGNGFGIAVNKGNDELV 221 Query: 239 NIVSWTHYAMVTAEELGI 256 N ++ + E + Sbjct: 222 NKLNTALKTVKANGEYDV 239 >gi|52425332|ref|YP_088469.1| ArtI protein [Mannheimia succiniciproducens MBEL55E] gi|52307384|gb|AAU37884.1| ArtI protein [Mannheimia succiniciproducens MBEL55E] Length = 262 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 65/211 (30%), Gaps = 10/211 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M+K + + + T+ + A L I +G + G F A+G G+ Sbjct: 1 MFKKLVLLATGMFAVATTTQAVAADSLLDRINNKGTITVGTEGTYAPFTYHDASGKLTGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ RA++ + +++ L++ + DI++ T E Sbjct: 61 DVEVTRAVADKLGVK---VEFKETAWDSMMAGLKAGRFDIVANQVALT-TPERQATFDKS 116 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + Q+ T+ LA +A + + + Sbjct: 117 EPYSWSGAMMAVRADDDSIKTLDDIKDRKAAQSLTSNYGELAREKQAK-----IVPVDGL 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + R D D A+ N Sbjct: 172 AQSLLVVQQKRADFTLNDSLAILDYLKKNPN 202 >gi|330877311|gb|EGH11460.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 260 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 87/252 (34%), Gaps = 19/252 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + + K+ L+ G++ F A+G GFD Sbjct: 1 MKKAWLTLSALAL------CIAAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +++ + L++++ D + + T RE + F Sbjct: 53 IDLGNAICKEL---KVTCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IDFSN 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K G + + L G ++ + GT E + + Sbjct: 108 ELFSGPTSLVFKKGAGFTADPASLKGKTVGYEQGTIQEAYAKAVLDKSGVTTK--AYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTE 236 +++ A + R DA D+ L + +++ + + + +A I QG+ E Sbjct: 166 DQVYADLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPIDSELLPAKIAIGIAQGNKE 225 Query: 237 WYNIVSWTHYAM 248 ++ AM Sbjct: 226 LKALLDKGIKAM 237 >gi|291302343|ref|YP_003513621.1| extracellular solute-binding protein family 3 [Stackebrandtia nassauensis DSM 44728] gi|290571563|gb|ADD44528.1| extracellular solute-binding protein family 3 [Stackebrandtia nassauensis DSM 44728] Length = 315 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 75/221 (33%), Gaps = 11/221 (4%) Query: 29 DIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFD---DPSKIQYLPLN 84 DI G L G A G +GFD + R ++ IF + + ++ Sbjct: 68 DILDSGRLTIGSKFDQPLTGLRDKATGRIEGFDAEIGRIITQRIFGKVAEGENLDFIETV 127 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R L+ +D++ T E + F Y GQ + K +GI + LS Sbjct: 128 PANREKYLEDGTVDLVLATYTITP--ERKKAVTFAGPYYEAGQAIMTRKGEGIEDIKDLS 185 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 +C GTT+ + + N+ A DA + D LY Sbjct: 186 KKKVCAAEGTTSLDNVEKHNPRANVS---KPMRNWSSCRQALLEKEYDAVSTDDVILYGF 242 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + PS+ I + P + +G TE ++ T Sbjct: 243 LS--EDPSKLEISKKTFTTEPYGIGLPKGSTELQKFINETL 281 >gi|82777721|ref|YP_404070.1| lysine-, arginine-, ornithine-binding periplasmic protein [Shigella dysenteriae Sd197] gi|81241869|gb|ABB62579.1| lysine-, arginine-, ornithine-binding periplasmic protein [Shigella dysenteriae Sd197] Length = 260 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 96/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L++ + S+ A++ ++ G +T F+ A GD+ GFD Sbjct: 1 MKK--LILALSLLVGLSAAASSYAALPE------TVRIGTDTIYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E + +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L + + + + D Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257 >gi|330942301|gb|EGH44929.1| extracellular solute-binding protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 273 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 84/258 (32%), Gaps = 23/258 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I L+ L ++ + L ++K L + F+ + + GFD Sbjct: 1 MNYRALLGI-GLVTLAASTQVLAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ + ++ + S + DI + + R S F Sbjct: 60 VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKAR--SEVFNFPV 114 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI----- 174 Y +++ + I S LSG + + + ++ E L + P+ Sbjct: 115 EYYASPAVIVVNATEDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEEKPLQYPFE 174 Query: 175 -----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 ++ R DA + L K D+ + + + + P Sbjct: 175 DVQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGEPLYEEPN 231 Query: 227 APAIIQGDTEWYNIVSWT 244 + AI + D EW V Sbjct: 232 SVAIEKDDPEWDAKVRQV 249 >gi|116255121|ref|YP_770955.1| putative exported solute-binding protein [Rhizobium leguminosarum bv. viciae 3841] gi|115259769|emb|CAK02861.1| putative exported solute-binding protein [Rhizobium leguminosarum bv. viciae 3841] Length = 279 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 88/276 (31%), Gaps = 12/276 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + I + L + + +K G L F V ANG G DVD Sbjct: 2 KATHLGIFVALTLAQNAIGAEVPVTESVKSSGTLTIANGLDYAPFEFVDANGQPAGLDVD 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + I +K+ + + +L + ++ + +T+ + + F Sbjct: 62 LAHEAAKLI---TAKLDLQRIPFASQIPSLSAGRVKVAWA--TFTVKEDRLKQVDFVTFL 116 Query: 123 YFDGQGFIMH-KKKGISSVSQLSGASICVQAGT----TTELTLADYFKAHNMKYHPIVFE 177 ++ KK IS L G + VQ G+ TT+ D K++ K +++ Sbjct: 117 QSGTVAMVLPDKKDSISDAKSLCGKRVAVQTGSAADFTTDKLSEDCAKSNLPKIDKVIYP 176 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 ++ A R DA D S V+ P + PL A+ +GD Sbjct: 177 EQKDTIQAVLTGRADARFDD-STAAGYYEQTSNGK-LVVAPGVYDVLPLGVAVQKGDKAS 234 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 ++ ++ + + Sbjct: 235 AEMMQAIFQELIANGKYETVLDKYGMSLAAVKKSRI 270 >gi|300812584|ref|ZP_07093001.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496457|gb|EFK31562.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 500 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 43/264 (16%), Positives = 91/264 (34%), Gaps = 26/264 (9%) Query: 1 MYK--DFFVSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGFA 48 M K ++L L LF + +++++ IKK G L G++ Sbjct: 1 MKKLIKIMTALLLLAGLFTAAIPAVDAASSKKVTSSTVMKKIKKSGKLVVGMSADYPPLE 60 Query: 49 E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 V + G DV+ + ++ + ++ ++ +AL++ +ID++ Sbjct: 61 FTKNVNGRNKYVGVDVELAKQIAKDLGVK---LEIKNMDFDSLLVALETGKIDVIISGMT 117 Query: 106 WTLLREISLGLAFRPITY---FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 T R+ + F I Y D K +S + G ++ Q G+ +L Sbjct: 118 PTAERKK--SIDFSKIYYAEKSDYFVISKTNKAKYTSTASFKGKTVGAQTGSLQYTSLKK 175 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 +K + + A ++ + DA +TND V + Sbjct: 176 NAAKSGIKVKGLAKISN--LLMALKSGKVDAVLLGE-LNAKTYVTNDTSLSLVKSSLSQA 232 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHY 246 + A + +G + ++ T Sbjct: 233 QMGNAVGVAKGQGDLVKAINKTIN 256 >gi|189351174|ref|YP_001946802.1| polar amino acid transporter substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|189335196|dbj|BAG44266.1| polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] Length = 260 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I ++ + Sbjct: 22 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRIGVK---CVWVAQDLDGIIP 78 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149 AL++K+ DI+ + T R + F Y I + +V+ L G + Sbjct: 79 ALKAKKYDIIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKAGSPLQPTVASLKGKRVG 136 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E Y++ I ++ +++ A + R DA D L Sbjct: 137 VEQGSTQETYAKTYWEPQG--VTIIPYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 194 Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245 R K P A + + DT+ ++ Sbjct: 195 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKIRINKAL 235 >gi|269102811|ref|ZP_06155508.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Photobacterium damselae subsp. damselae CIP 102761] gi|268162709|gb|EEZ41205.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Photobacterium damselae subsp. damselae CIP 102761] Length = 245 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 83/258 (32%), Gaps = 24/258 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L + LK + F + N +GFD Sbjct: 1 MKKIVLATLIGLASTHALAAEQ------------ELKFAMEATYAPFEYIDENNQIQGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + K + AL+ K+ D D T R ++F Sbjct: 49 VDLANALCQQM---DVKCTFHNQAFDSLIPALKFKRYDAAISGIDITEAR--QQQVSFSE 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ K ++ + L+G I VQ G+T + L D + + + Sbjct: 104 PYYDNAAAFVSLK-DKVADQAALTGKRIGVQNGSTHQSYLLDNM----SGVTAVPYSSYQ 158 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238 + + R DA GD + + + + I + A+ + + E Sbjct: 159 DAFIDMQNGRIDAVFGDTAVVAEWFKKDPNLAYVGKPITNQKYFGNGFGIAVNKSNQELV 218 Query: 239 NIVSWTHYAMVTAEELGI 256 N ++ + + + Sbjct: 219 NKLNTALKTVKANGQYQV 236 >gi|237736429|ref|ZP_04566910.1| amino acid-binding protein [Fusobacterium mortiferum ATCC 9817] gi|229421471|gb|EEO36518.1| amino acid-binding protein [Fusobacterium mortiferum ATCC 9817] Length = 242 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 89/247 (36%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILC-LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K F ++L + + SF + L G N F ++ NG+ GF Sbjct: 1 MKKLFLKAVLVSMFAVSGLSFGAD-----------KLYVGTNAEFEPFEYLQ-NGEIVGF 48 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD ++ ++ + I++ + ALQ+K++D++ T R+ + + Sbjct: 49 DVDLMEEIAKSMGKE---IEWKNIAFDGLLPALQAKKLDVIIAGMTATEERKKFVNFSQT 105 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K + S +L G + V G T ++ +++ + Sbjct: 106 Y-YESNQMMLVHEKNPVVKSFDELKGHDVGVVLGYTGDIAVSEI-----EGVKVHRYNAT 159 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A +A + D D A P E ++ ++K A A+ + D E Sbjct: 160 SEAIMALKAQKIDVVVLDSE--PAKNYAKQNP-ELKLINTDVAKEEYAIAVGKNDKELVE 216 Query: 240 IVSWTHY 246 + Sbjct: 217 DIDKALT 223 >gi|218517221|ref|ZP_03514061.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli 8C-3] Length = 261 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 81/231 (35%), Gaps = 11/231 (4%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 A+ L +IKK+G + GI T F+ + A+G +G+D+D + ++ Sbjct: 1 AIAFTGASHIRQAGAATLDEIKKKGTITFGIVTDQPPFSFINASGQNEGYDIDLSKLMAK 60 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + + Y+P+ + R L + ++D+L + + + + Sbjct: 61 ELGVEA---AYVPITSANRIPQLMTGKVDMLICVMGV--YPDRAKVVQYVAPYAEINAAI 115 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 K G++ V +LSG SI V+ G++ + + D F+ A + Sbjct: 116 YGPKDGGVTKVEELSGHSIAVEKGSSMDKAVTDAAPK---DATIQRFDDASSAVQALLSG 172 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + ++ I+ +S A+ E Sbjct: 173 QVEYLGSYSHQFGGVEKAAPGKYAQKIV---LSTEYEGIAVRPKSEELGKW 220 >gi|157369611|ref|YP_001477600.1| extracellular solute-binding protein [Serratia proteamaculans 568] gi|157321375|gb|ABV40472.1| extracellular solute-binding protein family 3 [Serratia proteamaculans 568] Length = 259 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 83/249 (33%), Gaps = 22/249 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K I +L S + L+ G+ F A+G +GFD+D Sbjct: 2 KSLKTLIAAGCLLAAGSTLAAENT---------LRFGLEALYPPFESKSASGKLEGFDID 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A+ +A K ++ + AL++++ D ++ + T R + F Sbjct: 53 LGNAVCAAA---QLKCSWVETSFDSLIPALKARKFDAINSAMNVTDQR--RQAIDFTDSI 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y I G + + + L+G + V G+ E ++ + + ++ + Sbjct: 108 YQVPNRLIAKADSGLLPNATSLAGKHVGVLQGSIQETYAKAHWAPQGVD--VVSYQDQNQ 165 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTE 236 A R DA + + L + + D +S +A + +GD Sbjct: 166 AYLDLTAGRLDATLVMAPSGQSGFLAHPDGKGFAFVGDAVSDDKILGEGIAFGLRKGDDA 225 Query: 237 WYNIVSWTH 245 ++ Sbjct: 226 LKKKLNEAI 234 >gi|83718624|ref|YP_441446.1| amino acid ABC transporter periplasmic amino acid-binding protein [Burkholderia thailandensis E264] gi|257139878|ref|ZP_05588140.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis E264] gi|83652449|gb|ABC36512.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis E264] Length = 363 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + I +K + P + Sbjct: 125 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLANEVCKRI---NAKCTWTPQDLDGIIP 181 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149 AL++K+ D++ + T R + F Y I + SV L G + Sbjct: 182 ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLLPSVESLKGKRVG 239 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E +++ + ++ +++ A + R DA D L Sbjct: 240 VEQGSTQETFAKAHWEPKG--VTIVSYQNQDQVYADLGSGRLDATLQDEFQADYGFLRTP 297 Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245 R K P A + + D + N ++ Sbjct: 298 RGKGFAWAG-PAVKDPKTLGDGTAMGLRKDDADLKNAINRAL 338 >gi|258405217|ref|YP_003197959.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] gi|257797444|gb|ACV68381.1| extracellular solute-binding protein family 3 [Desulfohalobium retbaense DSM 5692] Length = 247 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 89/255 (34%), Gaps = 20/255 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +LCL + T+ S A L +T + F +G++ GFD Sbjct: 1 MRIVTRILLLCLAAVVMTAGSLQAKT---------LTVACDTNFMPFEFK-KDGEYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + D + P++ ALQ+ +D RE + + P Sbjct: 51 IDIWDTIAQDLGLDY---KLQPMDFNGIIPALQTGNVDAAIAAITIKSTREEVVDFSH-P 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + I +S L + + GTT+ ADY + + +F ++ Sbjct: 107 YYDAGLRVIVSADNNSIKGLSDLDDKIVATKIGTTS----ADYARENMDAKDVKLFPNID 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 R DA D A+ T + + V+ P + A QG ++ Sbjct: 163 AAYMELRTGGADAVLFDAPAVMYYANTAGKGAVKVVGP-LYQGQSYGIAFPQG-SDLREK 220 Query: 241 VSWTHYAMVTAEELG 255 V+ M+ + E Sbjct: 221 VNIALLKMIESGEYA 235 >gi|261400966|ref|ZP_05987091.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria lactamica ATCC 23970] gi|296313787|ref|ZP_06863728.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria polysaccharea ATCC 43768] gi|269209074|gb|EEZ75529.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria lactamica ATCC 23970] gi|296839609|gb|EFH23547.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria polysaccharea ATCC 43768] gi|309378375|emb|CBX23021.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 268 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 79/224 (35%), Gaps = 10/224 (4%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 + N F + + G+ +GFDVD A++ A KI++ F AL Sbjct: 37 KVYRVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFPALN 93 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQA 152 + D++ T + + F + Q ++ K K +SS L + V Sbjct: 94 NGDADVVMSGVTITD--DRKQSMDFSDPYFEITQVVLVPKGKKVSSSEDLKKMNKVGVVT 151 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-RP 211 G T + +++ N FE V I D+ D + + N + Sbjct: 152 GYTGDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKG 209 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + V LPD + A+ +GD +++ + + E Sbjct: 210 MDFVTLPD-FTTEHYGIAVRKGDEATVKMLNDALKKVRESGEYD 252 >gi|24113681|ref|NP_708191.1| histidine-binding periplasmic protein of high-affinity histidine transport system [Shigella flexneri 2a str. 301] gi|24052749|gb|AAN43898.1| histidine-binding periplasmic protein of high-affinity histidine transport system [Shigella flexneri 2a str. 301] Length = 264 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 90/240 (37%), Gaps = 16/240 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 +FS+ + L I + ++ G + F + G+ GFD++ + L I ++ Sbjct: 13 AFSSATAALAAIPQN--IRIGTDPTYAPFESKNSQGELVGFDIELAKELCKRI---NTQC 67 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ +L++K+ID + + T R +AF Y ++ K I Sbjct: 68 TFVENPLDALIPSLKAKKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQ 125 Query: 139 -SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +V L G + V GTT E +++ + + ++ + I + A R DA D Sbjct: 126 PTVESLKGKRVGVLQGTTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQD 183 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAE 252 A L ++ + L + + D E ++ +A + A+ Sbjct: 184 EVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD 242 >gi|317491410|ref|ZP_07949846.1| lysine-arginine-ornithine-binding periplasmic protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920957|gb|EFV42280.1| lysine-arginine-ornithine-binding periplasmic protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 243 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 81/247 (32%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + FT+ + ++ + F + +N GFD Sbjct: 1 MKKLMVCALLA--GMSFTATAAE-----------TIRFASSATYPPFESMDSNNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + AL+ K+ D + D T R+ + F Sbjct: 48 MDLAKALCKQM---QATCTFTNQAFDSLIPALKFKRYDAVISGMDITPERQKQVA--FTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + + + G + ++ GTT + L D + ++ + Sbjct: 103 PYYANSAIIIAEKG-KYKTFADMKGLRVGMENGTTHQKYLQDKHPE----IKTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++ R D GD + + +N + + L A+ +T Sbjct: 158 NAILDLKSGRLDGVFGDTAVVNEWLKSNPNLAAVGDHVTDAQYFGTGLGIAVRPENTALL 217 Query: 239 NIVSWTH 245 ++ Sbjct: 218 AQLNKAL 224 >gi|293392787|ref|ZP_06637105.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] gi|291424646|gb|EFE97857.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] Length = 256 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 36/246 (14%), Positives = 81/246 (32%), Gaps = 16/246 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+K + CL + + G F ++ +GFD Sbjct: 1 MFKRLVLIGACLAASLSAGSAVAETTY---------VVGSGGTYRPFEFENSSKQLEGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ A + +I+ + + F L S DI+ T R+ + F Sbjct: 52 IDIIKAVAKA---EGFQIKLVNTPWEGIFATLNSGDRDIIISGITITDKRKQM--VDFSA 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q ++ K + S++ L + V +T ++ ++D + F+ Sbjct: 107 PYFPAEQAIVVPKTSTVDSIAALKSLKVGVVNSSTGDIVVSDVLGKN--STAIKRFDNTP 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A GD+ T+ ++ + A+ +G+ E + Sbjct: 165 LMLQELFEDGISAAVGDVGVAKFYIKTHPEKQFKLVTDAKFQRQYFGIAVAKGNVELRDR 224 Query: 241 VSWTHY 246 ++ Sbjct: 225 INAGLK 230 >gi|29831920|ref|NP_826554.1| amino acid ABC transporter solute-binding protein [Streptomyces avermitilis MA-4680] gi|29609037|dbj|BAC73089.1| putative polar amino acid ABC transporter substrate-binding protein [Streptomyces avermitilis MA-4680] Length = 335 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 83/233 (35%), Gaps = 15/233 (6%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-----WKGFDVDFCRALSSAIFDDPS- 76 + + + IKKRG+L G++ + N +GFD+D ++ I P+ Sbjct: 76 SGAAIKAIKKRGYLSVGVDQNSYRWGYRDPNSTKKGSDLEGFDIDLAHRIADEILGKPNA 135 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 +++ + +R A++S Q+D++ R T R + F + GQ + KK G Sbjct: 136 DVRFHAIPTNQRIEAIRSGQVDMVVRTMTITCKRLADVA--FSDPYFRTGQQVLAPKKSG 193 Query: 137 ISSVS-QLSGASICVQAGTTTELTLADYFKAHNMKYHPI---VFERVEEIDAAYRAHRCD 192 I+ L+ IC A +T TL KA + + + + D Sbjct: 194 ITGYDKSLAHKRICTAASSTAFDTLTADRKAGRLVVSARMSEPVPNQLDCLVRLQLGQVD 253 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A D + + + + + A+ + V+ Sbjct: 254 AVVTDGALAASQAAQDP---TVELKGAAFTDEYYGVAMKLDAKDLVRRVNQVL 303 >gi|49089440|gb|AAT51683.1| PA5153 [synthetic construct] Length = 251 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 67/205 (32%), Gaps = 9/205 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 L+ G F + A+G GFD+D +AL + + ++ + + + A Sbjct: 23 AADKLRIGTEGAYPPFNGIDASGQAVGFDLDIGKALCAKM---KTECEVVTSDWDGIIPA 79 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICV 150 L +K+ D + + T R+ + F Y + F+ K + L G I Sbjct: 80 LNAKKFDFIVASMSITDERK--QAVDFTDPYYTNKLQFVAPKSVDFKTDKDSLKGKVIGA 137 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q T L D +++ E + R D D Y ++ Sbjct: 138 QRATIAGTWLEDNMA---DVVTIKLYDTQENAYLDLSSGRLDGVLADKFVQYDWLKSDAG 194 Query: 211 PSEHVILPDIISKSPLAPAIIQGDT 235 + + A+ +GD Sbjct: 195 KEFEFKGEPVFDNDKIGIAVRKGDP 219 >gi|77456539|ref|YP_346044.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77380542|gb|ABA72055.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 248 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 77/249 (30%), Gaps = 27/249 (10%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 YK F++ + + + LK GI F A+G+ GFD Sbjct: 4 YKKVFLAAAVTLAFSAGAMAE------------TLKMGIEAAYPPFNNKDASGNVVGFDK 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D AL + + + + + AL +K+ D L + T R+ + F Sbjct: 52 DIGDALCAKMKVE---CSVVTSDWDGIIPALNAKKFDFLISSMSITDERKG--AVDFTDP 106 Query: 122 TYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K K + L G I Q T + D +++ E Sbjct: 107 YYSNKLQFIAPKDKEFKTDKDSLKGKVIGAQRATLAGTFMEDNMP----GVEVKLYDTQE 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + R D D Y ++ + + + A+ +GD Sbjct: 163 NAYLDLISGRLDGILADKYVNYEWLKSDAGKAYEFKGDPVEESDKIGIAVRKGDP----- 217 Query: 241 VSWTHYAMV 249 + A + Sbjct: 218 IREKLNAAL 226 >gi|225022582|ref|ZP_03711774.1| hypothetical protein CORMATOL_02622 [Corynebacterium matruchotii ATCC 33806] gi|224944650|gb|EEG25859.1| hypothetical protein CORMATOL_02622 [Corynebacterium matruchotii ATCC 33806] Length = 333 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 82/223 (36%), Gaps = 15/223 (6%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +I RG L GI+ + G+ +GF+VD + +++ IF +P+KI++ +++ Sbjct: 81 EIISRGRLIVGIDQSQNLLSFRNTITGELQGFEVDIAKEIAADIFGNPTKIEFRYVDSAN 140 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 +L+S QID+ R T R+ + F ++HK I +S++ G Sbjct: 141 WIDSLESHQIDMAIRTLSIT--RDRQDQVFFSTPYLKGSTKILVHKSSAIKGISEIGGRP 198 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +CV + +T + +V + + ++ A D L + Sbjct: 199 VCVTSQSTGIHYARNLAP----TSDLVVVRSSADCLIVMQQNQASAVITDDVILSGMSAQ 254 Query: 208 NDRPSEHVILPDIISKSPLAPA-----IIQGDTEWYNIVSWTH 245 + I +S A ++ T Sbjct: 255 DP---FTTIEGGSLSNENYGIATAKPGYRHHTDGLIRQINATL 294 >gi|118593287|ref|ZP_01550672.1| probable amino acid ABC transporter, substrate-binding protein [Stappia aggregata IAM 12614] gi|118434178|gb|EAV40834.1| probable amino acid ABC transporter, substrate-binding protein [Stappia aggregata IAM 12614] Length = 257 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 75/252 (29%), Gaps = 16/252 (6%) Query: 4 DFFVSILCLIIL--FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +F +I +L S + L IK G LK G F G GFDV Sbjct: 2 SWFKAIATAAVLQALTFSAAQAGENLDAIKSAGVLKIGTEGTYAPFTFHDGEGKLVGFDV 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + A++ + ++ L ++ D++ T R+ F Sbjct: 62 EIGEAVAEKLGVKAE---FIEGKWDGLIAGLDVERYDVVINQVGITDARK--QKYDFSDP 116 Query: 122 TYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I+ I L G Q+ T+ LA A + + + Sbjct: 117 YIASKAVLIVRDSNDDIKGFEDLDGKK-AAQSLTSNFGKLAVEAGA-----ELVGTDGFD 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + R DA D + K ++ + + + +GD E Sbjct: 171 QSIQLVLTRRADATINDSLSYLDFKKQKPDAPV-KVVAEKANADHSGILVRKGDPELVAA 229 Query: 241 VSWTHYAMVTAE 252 ++ A + A+ Sbjct: 230 LNEAL-ADIKAD 240 >gi|83950196|ref|ZP_00958929.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Roseovarius nubinhibens ISM] gi|83838095|gb|EAP77391.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Roseovarius nubinhibens ISM] Length = 269 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 85/231 (36%), Gaps = 12/231 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I I+ F + A L +IK G + G+ + + ++G+ G + Sbjct: 1 MKHAWKTVIASAAIVAFGTT-AQADQLQEIKDEGKIVVGVKQDYKPWGYLTSDGELAGLE 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D R ++ + + ++ +P+ A R L +ID++ R +G+ Sbjct: 60 IDLARDVAERLGVE---VELVPVVASNRMEFLSQGRIDLIIATMGDNPKRREVVGMIEPN 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 K G+ L G +C G+ + + + + F + Sbjct: 117 YYAGGTNVLA-PKAVGLKEWEDLRGKDVCALQGSYYNKRVTQLYGPN-----LVAFAGIP 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 E+ +A + C + D + + + ++++ +E + P A +I Sbjct: 171 EVTSALKNGSCIGFLYDNTWIESQLASDEQWAEFEMPFPTE--DPQAWSIA 219 >gi|219669813|ref|YP_002460248.1| extracellular solute-binding protein family 3 [Desulfitobacterium hafniense DCB-2] gi|219540073|gb|ACL21812.1| extracellular solute-binding protein family 3 [Desulfitobacterium hafniense DCB-2] Length = 281 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 90/254 (35%), Gaps = 20/254 (7%) Query: 1 MYKDF---------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M K++ SIL + + D L G+ F Sbjct: 1 MKKNYLLLLTAALLISSILLGCSKSQAPANQPSQAGNDATAAQELIVGMELAYPPFEMTD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G+ G VDF + L +A+ ++ + ALQ+K+ID++ + T R+ Sbjct: 61 EKGNPTGVSVDFAKDLGAALG---RPVKIENMAFSGLIPALQTKKIDMVISSMTITDERK 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNM 169 ++ F ++++K + V L G + V+ GTT + A+ Sbjct: 118 KTVA--FSDPYAKAWLALLINEKSSVKEVKDLNAPGRKVAVKNGTTGHIYAQ----ANLP 171 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + +VFE+ + DA+ D ++Y N++ + + P A Sbjct: 172 QAEIMVFEKESACILEVGQGKADAFIYDTLSIYRAWKQNEKTTRANLNPFQDKVEEWGVA 231 Query: 230 IIQGDTEWYNIVSW 243 + Q D E V+ Sbjct: 232 LRQDDKELTAKVNQ 245 >gi|330446185|ref|ZP_08309837.1| arginine ABC transporter, periplasmic arginine-binding protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490376|dbj|GAA04334.1| arginine ABC transporter, periplasmic arginine-binding protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 242 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 83/248 (33%), Gaps = 28/248 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +I+ L + +K + F + N +GFD Sbjct: 1 MNKILLATIIGLASSQAVAQ--------------EIKFAMEATYAPFEYMDENNQIQGFD 46 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + + AL+ K+ D D T R ++F Sbjct: 47 VDIANALCKEL---DATCTFHNQSFDSLIPALKFKRYDAAISAMDITEAR--QQQVSFSQ 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + GFI K ++ + L G + VQ G+T + L D + + + Sbjct: 102 PYYDNAAGFISIKG-KVADIDALKGKRVGVQNGSTHQSYLTDQMP----NVTTVPYNSYQ 156 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK---SPLAPAIIQGDTEW 237 + + R DA GD + + L D +V P K + A+ + + E Sbjct: 157 DAFIDMQNGRIDAVFGDTAVVAEW-LKKDDKLAYVGKPVTNPKYFGNGFGIAVNKNNQEL 215 Query: 238 YNIVSWTH 245 ++ Sbjct: 216 LKQLNTAL 223 >gi|206578400|ref|YP_002239863.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Klebsiella pneumoniae 342] gi|238893545|ref|YP_002918279.1| putative extracellular solute-binding protein [Klebsiella pneumoniae NTUH-K2044] gi|288936703|ref|YP_003440762.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|290510241|ref|ZP_06549611.1| lysine/arginine/ornithine transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|329999458|ref|ZP_08303432.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Klebsiella sp. MS 92-3] gi|206567458|gb|ACI09234.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Klebsiella pneumoniae 342] gi|238545861|dbj|BAH62212.1| putative bacterial extracellular solute-binding protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288891412|gb|ADC59730.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|289776957|gb|EFD84955.1| lysine/arginine/ornithine transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|328538321|gb|EGF64459.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Klebsiella sp. MS 92-3] Length = 258 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 34/258 (13%), Positives = 81/258 (31%), Gaps = 25/258 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + + ++ G++ F G GFD Sbjct: 1 MKKSLLLWLALMASTSALAEGG-----------KEIRFGVDPTFAPFEWKDPQGKLAGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +K ++ N AL++++ D + T R+ + F Sbjct: 50 IDLGNAICQQL---QAKCVWVESNFDGIIPALKARKFDAILSGMYMTEKRKAQIA--FSD 104 Query: 121 I-TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ QL G +I V+ G+ E + +++ + + + ++ Sbjct: 105 KLYNGPVFLVARKNTLQGNTPEQLKGKTIGVEQGSAQETYVNQHWRPQGI--NIVAYQGA 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + R D L + E + + L A + + D Sbjct: 163 DSVVRDLESGRIDGAVLSGMMADYSFLQQPQGKEFAFVGGHLQDDTLFGAGAAIGLRKDD 222 Query: 235 TEWYNIVSWTHYAMVTAE 252 ++ A + A+ Sbjct: 223 EALRQEINGAI-AKILAD 239 >gi|293570940|ref|ZP_06681985.1| L-cystine-binding protein TcyA [Enterococcus faecium E980] gi|291609003|gb|EFF38280.1| L-cystine-binding protein TcyA [Enterococcus faecium E980] Length = 278 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 35/255 (13%), Positives = 80/255 (31%), Gaps = 12/255 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K +++ ++ T A+ +++K+ L + L + + Sbjct: 1 MKKKRLFALITSTFFILSACGTAAANQEDHSWSNVEKKKELVVATSGTLFPASYYNDQNE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+DVD + ++ + K+ + N + ++ + D + + T RE Sbjct: 61 LVGYDVDLAKEVAKRL---NVKVSFKEYNVDGQITSVSKGESDFAANDFGITKEREKKFS 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 L+ FD GI S+ L G T+ + LA+ + A + Y Sbjct: 118 LSEPFKYSFDSMIVRKKDDSGIHSLDDLKGKK-AAGEPNTSYMRLAEKYGAKLVTYD--- 173 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + R D D ++ +++ + +G+ Sbjct: 174 NATNDQYLSDVANGRTDVILNDYYLQKMAVSALPDIPVKILENVYFNENESGFLLKEGND 233 Query: 236 EWYNIVSWTHYAMVT 250 + M Sbjct: 234 ALKKKIDGVLKEMKE 248 >gi|316983779|gb|EFV62760.1| L-cystine-binding protein tcyA [Neisseria meningitidis H44/76] gi|325140059|gb|EGC62588.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria meningitidis CU385] gi|325200527|gb|ADY95982.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria meningitidis H44/76] Length = 274 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 68/224 (30%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L + + S++ I +G + G Sbjct: 1 MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAVSGSLIERINNKGTVTVGTEGTYAP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 61 FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G ++ I S++ + G + KA Sbjct: 118 T-SPERQATFDKSDPYSWSGAVLVVRNDSNIKSIADIKGVKTAQSLTSNYGE------KA 170 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 171 KAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214 >gi|319410153|emb|CBY90489.1| putative amino acid ABC transporter binding lipoprotein [Neisseria meningitidis WUE 2594] gi|325203873|gb|ADY99326.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria meningitidis M01-240355] Length = 274 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 66/224 (29%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L + + S++ I +G + G Sbjct: 1 MLKKFVLGGIAALVLAACGGSESGSGASSAPAQSAVSGSLIERINNKGTVTVGTEGTYAP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 61 FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + I S+ + G + KA Sbjct: 118 T-SPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTAQSLTSNYGE------KA 170 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 171 KAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214 >gi|308388973|gb|ADO31293.1| putative amino acid permease substrate-binding protein [Neisseria meningitidis alpha710] gi|325127934|gb|EGC50837.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria meningitidis N1568] gi|325144175|gb|EGC66482.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria meningitidis M01-240013] Length = 274 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 66/224 (29%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L + + S++ I +G + G Sbjct: 1 MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAVSGSLIERINNKGTVTVGTEGTYAP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 61 FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + I S+ + G + KA Sbjct: 118 T-SPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTAQSLTSNYGE------KA 170 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 171 KAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214 >gi|77459080|ref|YP_348586.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77383083|gb|ABA74596.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 274 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 80/255 (31%), Gaps = 15/255 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M FV L L + A + IK++G + I G Sbjct: 1 MKN--FVIPAVLTSLMSCGVAVAAELPASIKEKGEIVVAIMPNYPPMDFKDPATNKLTGL 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D D AL+ + I++ ++ AL ++++D++ T R+ + F Sbjct: 59 DYDLGNALAERLGVK---IKWQETGFEQMINALTTERVDMVLSGMTDTAERQA--SVTFV 113 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-----NMKYHPI 174 Q + + K + + L G + TT +A + K + + I Sbjct: 114 DYFTSGPQFYTLQKNATTNEIIDLCGKKVGTSRRTTFPAEIAAWSKENCEAAGKPAINVI 173 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E + A R R DA L LK + + IS + + Sbjct: 174 GTEGSADARAQLRQSRIDAAMQGSETLSYLKTQEKD--MYKTVGQPISVQFTGLGVSKKK 231 Query: 235 TEWYNIVSWTHYAMV 249 E V +MV Sbjct: 232 PELSEAVKVALQSMV 246 >gi|157376892|ref|YP_001475492.1| extracellular solute-binding protein [Shewanella sediminis HAW-EB3] gi|157319266|gb|ABV38364.1| extracellular solute-binding protein, family 3 [Shewanella sediminis HAW-EB3] Length = 245 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 78/260 (30%), Gaps = 28/260 (10%) Query: 1 MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK--ANGDW 56 M K S+ +L T K L G N F V + + Sbjct: 1 MKKSILCLGSLGLAGVLMLTGCG---------KSDDVLVVGTNASFPPFEYVGGVSGDEI 51 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 KGFD+D R ++ ++ + +AL + ++D+++ T R+ + Sbjct: 52 KGFDIDLARQIAKDAGK---TLKVENMKFDSLIVALNAGKVDLIASGMTITAERQA--SV 106 Query: 117 AFRPITYF-DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y + I SV L G I VQ G+T + A + Sbjct: 107 NFSDPYYEATQVVLVNRDNTSIKSVDDLKGKHIAVQLGSTGD------IMAKSYSQEVTA 160 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F E + + D D + N ++ A+ + Sbjct: 161 FNTGFEAIMELKNAKVDLVLFDSEPAASFLDKNPG---LKMVELDFDPEFYGFAVTKEKV 217 Query: 236 EWYNIVSWTHYAMVTAEELG 255 E + ++ T M E Sbjct: 218 ELLHSINSTLTTMKHNGEYD 237 >gi|149191815|ref|ZP_01870052.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio shilonii AK1] gi|148834333|gb|EDL51333.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio shilonii AK1] Length = 230 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 81/218 (37%), Gaps = 14/218 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ GI F+ +A+G KGFDVD AL + +K +P + +L ++ Sbjct: 1 MRFGIEGAYPPFSWTEADGSLKGFDVDMANALCEEL---KAKCVIVPQDWDGIIPSLLAR 57 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 + D + T R+ + F FI K G+ L+GA I VQ TT Sbjct: 58 KYDAIIAAMSITEERKK--KVDFTGKYAQIPNKFIAKKGAGL-DFDNLNGAKIGVQRATT 114 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 + L D + + + + +E R A GD SAL + D + Sbjct: 115 HDKYLTDNY---GDQVEIVRYGSFDEAYLDLANGRIVAVLGDASALEEGVINKDGGDAYE 171 Query: 216 ILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248 + ++ + A+ + D + + ++ Sbjct: 172 FVGPSLTDPKWFGEGMGIAVRKQDKDLTKQLDAAIKSL 209 >gi|289627331|ref|ZP_06460285.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330870383|gb|EGH05092.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 254 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 40/255 (15%), Positives = 79/255 (30%), Gaps = 27/255 (10%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 YK + + ++F+ +K GI F A+G GFD Sbjct: 4 YKKILLIAAATLAFSGSAFAE------------TMKMGIEGAYPPFNNKDASGQVVGFDY 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + +AL + + + + + AL + + D L + T R+ + F Sbjct: 52 EIGQALCARMKVECEAVT---SDWDGIIPALMANKFDFLISSLSITEERK--QVVDFTNP 106 Query: 122 TYFDGQGFIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 Y + FI K + L+G S+ Q T L D + Sbjct: 107 YYSNKLQFIAPKTSSFDVSSTEKAKESLAGKSVGAQRSTLAATWLEDKLG----IMDAKL 162 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ E + R DA D + + + ++ + A+ +GD Sbjct: 163 YDTQENAFLDLSSGRVDAMLADKYVSFEWLKSEAGQNFEFKGEPVVEDDKIGIAVRKGDD 222 Query: 236 EWYNIVSWTHYAMVT 250 ++ ++ Sbjct: 223 ALRERLNAALKEIIA 237 >gi|291087463|ref|ZP_06346539.2| amino acid ABC transporter substrate-binding protein [Clostridium sp. M62/1] gi|291075062|gb|EFE12426.1| amino acid ABC transporter substrate-binding protein [Clostridium sp. M62/1] Length = 287 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 78/212 (36%), Gaps = 14/212 (6%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G L G N + + G DV+ A+ + D +Q + AL Sbjct: 70 GTLIMGTNATFPPYEYYDGD-AIVGIDVEIAEAIGEKLGMD---VQVEDMEFDALIPALV 125 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 S ++D ++ T RE + F Q I+ + I+SV L+G + VQ G Sbjct: 126 SDKVDFVAAGMTVTPDREA--SVNFTDTYATAAQVIIVKEGSDIASVDDLAGKVVGVQLG 183 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT +L +++ + + E + + DA D + ++ Sbjct: 184 TTGDLLVSEI-----EGTTVERYNKGFEAVQSVTQGKIDAVVIDNAPAKNFVAQDEG--- 235 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 VIL + +S A A+ + +TE ++ Sbjct: 236 LVILEEALSSEDYAMAVNKDNTELLEQINGAI 267 >gi|30063735|ref|NP_837906.1| histidine-binding periplasmic protein of high-affinity histidine transport system [Shigella flexneri 2a str. 2457T] gi|110806272|ref|YP_689792.1| histidine-binding periplasmic protein of high-affinity histidine transport system [Shigella flexneri 5 str. 8401] gi|30041990|gb|AAP17716.1| histidine-binding periplasmic protein of high-affinity histidine transport system [Shigella flexneri 2a str. 2457T] gi|110615820|gb|ABF04487.1| histidine-binding periplasmic protein of high-affinity histidine transport system [Shigella flexneri 5 str. 8401] gi|281601750|gb|ADA74734.1| Histidine-binding periplasmic protein of high-affinity histidine transport system [Shigella flexneri 2002017] gi|313651133|gb|EFS15532.1| histidine-binding periplasmic protein [Shigella flexneri 2a str. 2457T] Length = 260 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 97/261 (37%), Gaps = 22/261 (8%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 +FS+ + L I + ++ G + F + G+ GFD++ + L I ++ Sbjct: 13 AFSSATAALAAIPQN--IRIGTDPTYAPFESKNSQGELVGFDIELAKELCKRI---NTQC 67 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ +L++K+ID + + T R +AF Y ++ K I Sbjct: 68 TFVENPLDALIPSLKAKKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQ 125 Query: 139 -SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +V L G + V GTT E +++ + + ++ + I + A R DA D Sbjct: 126 PTVESLKGKRVGVLQGTTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQD 183 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAE 252 A L ++ + L + + D E ++ +A + A+ Sbjct: 184 EVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD 242 Query: 253 ELGITQKNINQVSKDTTNPDV 273 +++K + DV Sbjct: 243 ------GTYEKLAKKYFDFDV 257 >gi|78061080|ref|YP_370988.1| lysine/arginine/ornithine ABC transporter periplasmic ligand-binding protein [Burkholderia sp. 383] gi|77968965|gb|ABB10344.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 260 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 89/254 (35%), Gaps = 21/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ + + +L ++ + A K ++ G++ F A+G GFD Sbjct: 1 MKK--ILAAVTVALLAVSAGTAYA------KDWTTVRFGVDASYPPFESKGADGKVVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + +K ++ + AL++++ D + + T R+ + F Sbjct: 53 VDLGNEICRRM---NAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPARQEQIA--FSA 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K G+ + L G S+ V+ GT E Y+ + + + ++ Sbjct: 108 KLFNTPTRLVTKKGAGLMPTAESLKGKSVGVEQGTIQETYAKTYWASKG--VNVVPYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +++ A + R D D L R + + + + D Sbjct: 166 DQVYADLISGRLDGALQDAVQAEIGFLKTPRGANFDFAGKDLDDPKTLGEGAGIGLRKED 225 Query: 235 TEWYNIVSWTHYAM 248 T+ + M Sbjct: 226 TDLKAKIDGAIAGM 239 >gi|66044227|ref|YP_234068.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae B728a] gi|63254934|gb|AAY36030.1| extracellular solute-binding protein, family 3 [Pseudomonas syringae pv. syringae B728a] Length = 273 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 78/257 (30%), Gaps = 21/257 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I L+ L ++ + L ++K L + F+ + + GFD Sbjct: 1 MNYRALLGI-GLVTLAASTQVLAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ + ++ + S + DI + + R Sbjct: 60 VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174 + I S LSG + + + ++ E L + P+ Sbjct: 116 YYASPAVIVVNASDDRIHSAEDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFED 175 Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 ++ R DA + L K D+ + + + + P + Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGEPLYEEPNS 232 Query: 228 PAIIQGDTEWYNIVSWT 244 AI + D EW V Sbjct: 233 VAIEKDDPEWDAKVREV 249 >gi|254250731|ref|ZP_04944050.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] gi|124879865|gb|EAY67221.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] Length = 320 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 85/245 (34%), Gaps = 12/245 (4%) Query: 2 YKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ +I F + +A L I K G L+ + F V + +G+D Sbjct: 62 RRTWLAALFAAPVIALFAAAPAHADALDTIAKNGTLRVAVPEDYPPFGSVGTDMQPQGYD 121 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ ++ ++ +P+N+ R L + ++D++ + T RE + F Sbjct: 122 IDMAGLLAKSLGVK---LKLVPVNSANRIPYLTTNKVDMVISSLGKTPEREKV--IDFSS 176 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 QG +S+ + L+G ++ G E+ L+ FE Sbjct: 177 AYAPYFQGVFGPSDVKVSTPADLTGKTVGATRGALEEIALSQLAP----NATIKRFEDNN 232 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + + A+ P + +I SP + + + Sbjct: 233 ATIQAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEVKFVIKNSPCFVGVNKNEPRLLAK 290 Query: 241 VSWTH 245 + Sbjct: 291 IDDAI 295 >gi|241764991|ref|ZP_04762988.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241365425|gb|EER60212.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 300 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 49/232 (21%), Positives = 88/232 (37%), Gaps = 9/232 (3%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFC 64 F +++ + + +++ IK+ G L+ G F+ + +G +GFD Sbjct: 34 FDALIAQGPVADAATIASSTWASKIKQAGTLRLGGTQTSNLFSLLNEKDGKIRGFDAGLA 93 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + L+ I D K Q+ + + R L + Q+D++ T R ++F Y Sbjct: 94 QLLTRYILGDGGKYQFTQVTSSTREQVLINDQVDMVFATYSITPARAE--KISFAGPYYT 151 Query: 125 DGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G ++ I S + L+G + QAG+T LA Y F+ +E Sbjct: 152 SQAGVLVKANNKTIQSYNDLAGKKVATQAGSTGPAILAQYAPKA----VVQEFQTHQEAL 207 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 A R R DAY D + L L+ + + P + +G Sbjct: 208 DALRQGRVDAYITDHTLLL-NALSLGTGDAKLAGAPFGLQDPYGVGLPKGSD 258 >gi|297590597|ref|ZP_06949235.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus MN8] gi|297575483|gb|EFH94199.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus MN8] Length = 485 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 38/283 (13%), Positives = 92/283 (32%), Gaps = 25/283 (8%) Query: 3 KDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAE---VK 51 K IL L +L ++ + IK+RG L+ G++ V Sbjct: 2 KCLIRFILVLGLLISSAMVYINPAAYAEQDQKWEKIKERGELRVGLSADYAPMEFEHTVN 61 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++ G D+D + ++ + K++ + ++ AL++ +IDI+ T R+ Sbjct: 62 GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118 Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + F ++ K + + + Q GT E + Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNDYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228 R+ ++ A ++ + + + A N + +V + + +A Sbjct: 173 NASITSLSRLPDVILALKSGKIEGVVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + + + ++ T + + N D + Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273 >gi|91787395|ref|YP_548347.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91696620|gb|ABE43449.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 265 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 79/252 (31%), Gaps = 14/252 (5%) Query: 1 MYKDFFVSILCLII----LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M ++ L + L I + + G+ + + + ++ Sbjct: 1 MKLKALSTLAGLFASTVLTLVSPAHAADDSLTSIMAKKSIALGVASDFPPYGFMGSDFKL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G DV + ++ + ++P++ R LQ+K+ID++ RE + Sbjct: 61 TGVDVATAQLIADKLGVKAE---FVPVSTPNRIPYLQTKKIDLIVSALGKNAEREKV--I 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Q K I S L+G +I V GT + L + F Sbjct: 116 DFTVAYAPFFQAVFGPKALSIKSFGDLAGKTIAVTRGTIQDDVLQQVAP---PTLKIMRF 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E AA+ + + + A P ++ SP + +G+T Sbjct: 173 EDDATTVAAFISQQTQLLATGAAVAAAAVQ--KNPQVQAEYKLLLKDSPNFIGVRKGETA 230 Query: 237 WYNIVSWTHYAM 248 V+ A Sbjct: 231 LLTKVNDILRAA 242 >gi|330900854|gb|EGH32273.1| extracellular solute-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 273 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 83/258 (32%), Gaps = 23/258 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I L+ L ++ + L ++K L + F+ + + GFD Sbjct: 1 MNYRALLGI-GLVTLAASTQVLAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ + ++ + S + DI + + R S F Sbjct: 60 VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKAR--SEVFNFPV 114 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI----- 174 Y +++ I S LSG + + + ++ E L + P+ Sbjct: 115 EYYASPAVIVVNATDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFE 174 Query: 175 -----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 ++ R DA + L K D+ + + + + P Sbjct: 175 DVQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGEPLYEEPN 231 Query: 227 APAIIQGDTEWYNIVSWT 244 + AI + D EW V Sbjct: 232 SVAIEKDDPEWDAKVRQV 249 >gi|326692574|ref|ZP_08229579.1| amino acid ABC transporter [Leuconostoc argentinum KCTC 3773] Length = 491 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 115/352 (32%), Gaps = 50/352 (14%) Query: 1 MYKDFFVSILCLII---LFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAE---V 50 M + V + +++ L +A IKK G L G++ F + Sbjct: 6 MKQMLMVLVSVMLLIPTLLVFVPKAHADDTDATYAKIKKNGVLVVGMSADYAPFEFHTTI 65 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + GF+V + L+ + +Q + ALQ+ +ID++ + T R Sbjct: 66 NGRDEIVGFEVAMAKQLAKDLGVK---MQIKEMGFDGLIGALQTGKIDVIISGINATPER 122 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQ---LSGASICVQAGTTTELTLADYFKAH 167 E + F Q ++ KK + +G + Q TT E + + Sbjct: 123 EQVVA--FSKPYMSPKQTVLILKKNAPQFTTDVSSFAGKKVGAQRQTTQETFVQENMP-- 178 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PL 226 + ++V ++ + + + A + VI P + Sbjct: 179 --NSKLVSLQKVPDLVSQLSTGKIAGIVLNDPISEAYAQQ--NKALAVIYPKPNESEGAV 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG--ITQKNINQVSKDTTNPDVQRFL--GIDKS 282 + A+ + ++ MV++ +L + N +K + G + Sbjct: 235 SIAMPKNSPVLQAKINTAIDQMVSSGQLNKFKKEANTLMFAKQSFWAKYGNLFVKGTLIT 294 Query: 283 SNI-------GEALG-------LTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 + G LG L+ ++ R+I ++ Y E + R + L Sbjct: 295 LALAAVAVIIGVVLGTILALFKLSPNFILRVIGNV--YVE-YVR----GTPL 339 >gi|161519776|ref|YP_001583203.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189354045|ref|YP_001949672.1| polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221210435|ref|ZP_03583415.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD1] gi|160343826|gb|ABX16911.1| extracellular solute-binding protein family 3 [Burkholderia multivorans ATCC 17616] gi|189338067|dbj|BAG47136.1| polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221169391|gb|EEE01858.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD1] Length = 261 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 89/254 (35%), Gaps = 22/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + L SF+ + S ++ GI+ F + +G GFD Sbjct: 1 MNRIAKLLATALACAPLVSFAQDTST---------IRWGIDPTYPPFEAKQPDGSLTGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + + +K ++ N AL++++ D++ T R + F Sbjct: 52 IDLRDAICAQL---HAKCVWVEQNFDGMIPALRARKFDVIMSAMTATEER--LKQIDFSN 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + + S + L+G + + GTT ++ + + ++ Sbjct: 107 KLYASPAALVAPAGSKLQSTAASLAGKRVGIIQGTTQDMYAKAEWAPKG--VTIVTYQNQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +++ R DA D + L +R D I+ S + A + +GD Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTERGKHFAFAGDDITDSRITGFGVAMGLRKGD 224 Query: 235 TEWYNIVSWTHYAM 248 ++ A+ Sbjct: 225 AALKARLNDAIAAI 238 >gi|62180925|ref|YP_217342.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62128558|gb|AAX66261.1| ABC superfamily (bind_prot), histidine transport protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715403|gb|EFZ06974.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 260 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 97/264 (36%), Gaps = 26/264 (9%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 F +S S A+I I + G + F A G+ GFD+D + L I Sbjct: 14 FSSSTSAFAAIPQKI------RIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---N 64 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 ++ ++ +L++K+ID + + T R +AF Y ++ K Sbjct: 65 TQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNS 122 Query: 136 GIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I +V+ L G + V GTT E +++ + + ++ + I + A R DA Sbjct: 123 DIQPTVASLKGKRVGVLQGTTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAA 180 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMV 249 D A L ++ + L + + D E ++ +A + Sbjct: 181 FQDEVAASEGFLKQPVGKDYKFGGPAVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEM 239 Query: 250 TAEELGITQKNINQVSKDTTNPDV 273 A+ +++K + DV Sbjct: 240 RAD------GTYEKLAKKYFDFDV 257 >gi|313123034|ref|YP_004033293.1| ABC amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279597|gb|ADQ60316.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 270 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 37/258 (14%), Positives = 77/258 (29%), Gaps = 26/258 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-----------GDIKKRGFLKCGINTGLVGFAE 49 M K + L + + S ++ +G L G+ ++ Sbjct: 1 MKKSIKKILSFLAVAGIGASLAACSSSSSSSSSSSSYQSELTSKGTLTIGLEGTYAPYSY 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 +G GF+VD +A++ + +++P L S + D++ N T Sbjct: 61 R-KSGKLTGFEVDLGKAVAKKMGLKA---KFVPTKWDSLIAGLGSSKYDVVLNNITQTPE 116 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ F + I K ++ +SQ+ G GT + Sbjct: 117 RKKV--YNFSDPYIYSRYALITKKSSKVTKLSQIQGKKWAEGTGTNNAALV------KKY 168 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LA 227 K + + R R D A YA ++ + + P ++ Sbjct: 169 KGTIVPSGDFSTSLSLVRQGRVDGTINAAEAWYAY-AKDNNTKDLKMTDLSKQVDPVKVS 227 Query: 228 PAIIQGDTEWYNIVSWTH 245 + +T+ + Sbjct: 228 ALFNKKNTKLLAKFNKAL 245 >gi|225175911|ref|ZP_03729903.1| extracellular solute-binding protein family 3 [Dethiobacter alkaliphilus AHT 1] gi|225168499|gb|EEG77301.1| extracellular solute-binding protein family 3 [Dethiobacter alkaliphilus AHT 1] Length = 284 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 82/267 (30%), Gaps = 34/267 (12%) Query: 2 YKDFFVSILCLIILFFTSFS-----------------------TNASILGDIKKRGFLKC 38 K+ I+ + IL L + G Sbjct: 4 KKNLLFLIIAVSILALAVVGCGDNNEPAPDNNNNNNGNDNGEAVGDGSLQRVLDAGEFHV 63 Query: 39 GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98 + G F +G+ GFDVD A++ + + + Y L++ + D Sbjct: 64 VGSGGYRPFNYFDEDGEIVGFDVDTGAAIAERLGVE---LNYGDTAWDGIIEGLRAGRYD 120 Query: 99 ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158 + + T R ++F Y+ G ++ + GI+ S++ G +I V GTT Sbjct: 121 AVLGSMAITDER--LEVVSFTIPYYYSGAQLVVREDSGITDPSEMDGLTIGVATGTTF-- 176 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 AD + +E + R D D + + Sbjct: 177 --ADDAEELG--ATVSYYEDDNQTLMELINGRIDGVITDRVVAIVNIDGMQGGDQLTMAG 232 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTH 245 D++ +A A+ Q D E ++ Sbjct: 233 DLLRLEQMALALRQDDEELLAELNEIL 259 >gi|261822749|ref|YP_003260855.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] gi|261606762|gb|ACX89248.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] Length = 256 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 78/246 (31%), Gaps = 16/246 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+K TS G F A + +GFD Sbjct: 1 MFKKLLFVGALFATALSTSAFAAEPTY---------VVGSGGTYRPFEFENAQKELEGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ A + I+ + + F L S DI+ T R+ + F Sbjct: 52 IDIIKAVAKA---ENFNIKLINTPWEGIFATLNSGDRDIIISGITITDKRKQM--VDFSA 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q ++ K I S++ L + V +T ++ ++D + F+ Sbjct: 107 PYFPAEQSIVVPKGSTIDSIAALKAHKVGVVNSSTADIVVSDVLGKN--STSIKRFDNTP 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A GD+ + T+ +++ + A+ +G+ + Sbjct: 165 LMLQELYEDGVGAAVGDVGVVKFYIKTHPEKQFNLVSDAKFERQYFGIAVAKGNDQLREK 224 Query: 241 VSWTHY 246 ++ Sbjct: 225 INAGLK 230 >gi|134296590|ref|YP_001120325.1| cationic amino acid ABC transporter periplasmic binding protein [Burkholderia vietnamiensis G4] gi|134139747|gb|ABO55490.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia vietnamiensis G4] Length = 260 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I K ++ + Sbjct: 22 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI---NVKCVWVAQDLDGIIP 78 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149 AL++K+ D++ + T R + F Y I + +V+ L G + Sbjct: 79 ALKAKKYDVIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKAGSPLQPTVASLKGKRVG 136 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E Y++ I ++ +++ + R DA D L Sbjct: 137 VEQGSTQESYAKAYWEPQG--VTVIPYQNQDQVYTDLGSGRLDATLQDELQADYGFLRTP 194 Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245 R K P A + + DT+ ++ Sbjct: 195 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKQDTDLKLKINNAL 235 >gi|91224522|ref|ZP_01259784.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio alginolyticus 12G01] gi|91190864|gb|EAS77131.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio alginolyticus 12G01] Length = 253 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 80/259 (30%), Gaps = 26/259 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K V + L +F + K+ ++ + F+ G +GF+VD Sbjct: 2 KWIVVLFISLFSVFSHA-----------KEWKQIRFTVEGAYPPFSWTTKEGKLEGFEVD 50 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 AL + K ++ +L S++ D + T RE + F Sbjct: 51 LANALCKEL---EVKCVISKMDWDGIIPSLLSRKNDAIIAAMTITEEREK--KVDFTVPY 105 Query: 123 YFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 F+M + I L+ SI VQ T + L+ A + +E Sbjct: 106 AKVPTRFVMKNDREINMDDGSLNRLSIGVQRATIGDKYLS----ALYPDIDIRRYGTFDE 161 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTE 236 R DA G L A L + + ++ A+ + D E Sbjct: 162 AFTDLLNGRLDAVFGGSIGLSAGFLETAQGQGYHFTGPAFTEEKWFGRGIGVAVRKQDKE 221 Query: 237 WYNIVSWTHYAMVTAEELG 255 ++ ++ + + Sbjct: 222 LKALLDSGIQKLIQSGKHK 240 >gi|320547043|ref|ZP_08041342.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] gi|320448328|gb|EFW89072.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] Length = 269 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 79/252 (31%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWK 57 M K ++ L+ L + ++ + I+ +G + + F + Sbjct: 1 MKK-ILGALFLLVTLGTMTACSSGTNQKSIQDKGKIVIATESEFAPFEFKTLINGKDTLV 59 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D++ +A++ + + ++ ++ S + DI T R+ Sbjct: 60 GADIELGKAIAKELGVKAD---FSVMSFNNVLASVTSGKADIAIAGISVTDERKK--AYD 114 Query: 118 FRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y I+ K S++ LSG SI Q G+ E D + Sbjct: 115 FSKSYYEAENVVIVKKTDLAAYSTLDSLSGKSIGAQKGSIQENIAKDQLP----DSSLVS 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E+ + ++ A + + ND + + + A A +G Sbjct: 171 LTSNGEMINELKNNQLQAVVLEKAIAEGYISQNDDLTIANLNLKSTATDAYAVAFAKGTD 230 Query: 236 -EWYNIVSWTHY 246 + V+ Sbjct: 231 KKLIASVNKVIK 242 >gi|319404356|emb|CBI77956.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Bartonella rochalimae ATCC BAA-1498] Length = 250 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 80/234 (34%), Gaps = 9/234 (3%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L +F +A++ L F + +N GFD+D AL + Sbjct: 3 LLAAAFIISATLFSQFVNAKTLTIATEGSYPPFNYIDSNNKLHGFDIDITHALCKKM--- 59 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 + + L L +K+ D + + T R + F Y I+ K Sbjct: 60 KIECVITIQDFDGIILGLLAKKYDAIIASLSPTQER--LKKIDFTDAYYSTELAAIVPKD 117 Query: 135 KGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I SV G ++ VQ TT + +++ + + ++ +E+ ++R D Sbjct: 118 SQIKEISVEAFKGKNLGVQLNTTQAIYAENHYASKG--VNIKLYPTTKEVIRDLLSNRLD 175 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 D + + H + ++ P+A AI Q + + N + Sbjct: 176 VVILDKLQILDWFKHKGKDCCHFLGSIEGTELPIAIAIRQNNDDLKNQFNKAIK 229 >gi|167585064|ref|ZP_02377452.1| extracellular solute-binding protein, family 3 [Burkholderia ubonensis Bu] Length = 254 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 70/248 (28%), Gaps = 14/248 (5%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + ++ L+ + + + A L IK G + G F G GFDVD A Sbjct: 1 MLLVALLPIVAAANAFAADDLSHIKSSGVFRVGTEGTYAPFTYHDETGRLTGFDVDLATA 60 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + P Q++ L + D + T R+ F Sbjct: 61 IAQRLGVKP---QFVEGKWDGLIAGLDVNRYDAVVNEVAITDARKA--KYDFSAPYITSR 115 Query: 127 QGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 I+ I S L G T+ LA A + + E Sbjct: 116 AVLIVRADNTTIRSFDDLKGRKSA-NTLTSNFGKLAAAHGA-----DVVAVQGFNESIDL 169 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWT 244 + R DA D + + + D I +G E + Sbjct: 170 LTSGRVDATVNDSLSYLDFRKHKPDAKLKIAATDTSGAGDQSGVLIRKGSPELRAAIDKA 229 Query: 245 HYAMVTAE 252 A + A+ Sbjct: 230 L-ADIKAD 236 >gi|49484100|ref|YP_041324.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257425970|ref|ZP_05602394.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus 55/2053] gi|282904433|ref|ZP_06312321.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus C160] gi|282906256|ref|ZP_06314111.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus Btn1260] gi|282909175|ref|ZP_06316993.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911481|ref|ZP_06319283.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus WBG10049] gi|282919619|ref|ZP_06327354.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus C427] gi|283958611|ref|ZP_06376062.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus A017934/97] gi|295428436|ref|ZP_06821065.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|49242229|emb|CAG40936.1| putative extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257271664|gb|EEV03810.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus 55/2053] gi|282317429|gb|EFB47803.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus C427] gi|282325176|gb|EFB55486.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus WBG10049] gi|282327439|gb|EFB57734.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331548|gb|EFB61062.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus Btn1260] gi|282596051|gb|EFC01015.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus C160] gi|283790760|gb|EFC29577.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus A017934/97] gi|295127836|gb|EFG57473.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|312437677|gb|ADQ76748.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH60] gi|315195770|gb|EFU26157.1| putative extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus CGS00] Length = 485 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 38/283 (13%), Positives = 92/283 (32%), Gaps = 25/283 (8%) Query: 3 KDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAE---VK 51 K IL L +L ++ + IK+RG L+ G++ V Sbjct: 2 KCLIRFILVLGLLISSAMVYINPAAYAEQDQKWEKIKERGELRVGLSADYAPMEFEHTVN 61 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++ G D+D + ++ + K++ + ++ AL++ +IDI+ T R+ Sbjct: 62 GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118 Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + F ++ K + + + Q GT E + Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNDYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228 R+ ++ A ++ + + + A N + +V + + +A Sbjct: 173 NASITSLSRLPDVILALKSGKVEGVVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + + + ++ T + + N D + Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273 >gi|167826829|ref|ZP_02458300.1| lysine-arginine-ornithine transport system, binding exported protein [Burkholderia pseudomallei 9] gi|167921523|ref|ZP_02508614.1| lysine-arginine-ornithine transport system, binding exported protein [Burkholderia pseudomallei BCC215] Length = 256 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 85/245 (34%), Gaps = 19/245 (7%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++ L + +L ++ A I + G++ F +G GFDVD Sbjct: 1 MAALTVALLAVSAGGVQAKDWSTI------RFGVDASYPPFESKGPDGKVVGFDVDLGNE 54 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + + +K ++ + AL++++ D + + T RE + F + Sbjct: 55 ICKRV---KAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPQREEQIA--FSSKLFNTP 109 Query: 127 QGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + K + + L G ++ V+ GT E ++ +K P ++ +++ A Sbjct: 110 TRLVTKKGANLMPTAESLKGKTVGVEQGTIQETYAKVHWAPMGVKVQP--YQNQDQVYAD 167 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNI 240 A R DA D L R ++ ++ + + DT+ Sbjct: 168 LIAGRLDAALQDAVQADIGFLKTPRGKDYAFAGTDLNDPKTLGEGAGIGLRKEDTDLKAK 227 Query: 241 VSWTH 245 + Sbjct: 228 IDKAI 232 >gi|240126454|ref|ZP_04739340.1| Histidine-binding protein precursor [Neisseria gonorrhoeae SK-92-679] gi|268685042|ref|ZP_06151904.1| amino acid ABC transporter [Neisseria gonorrhoeae SK-92-679] gi|268625326|gb|EEZ57726.1| amino acid ABC transporter [Neisseria gonorrhoeae SK-92-679] Length = 268 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 87/258 (33%), Gaps = 11/258 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWKGF 59 M K ++ C + G + + N F + + G+ +GF Sbjct: 3 MKKWIAAALACSALALSACGGQGKDAAAPAANPGKVYRVASNAEFAPFESLDSKGNVEGF 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A++ A KI++ F AL + DI+ T + + F Sbjct: 63 DVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGDADIVMSGVTITD--DRKQSMDFS 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q ++ K K +SS L + V G T + +++ N FE Sbjct: 118 DPYFEITQVVLVPKGKKVSSSEDLKKMNKVGVVTGHTGDFSVSKLLG--NDNPKIARFEN 175 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEW 237 V I D+ D + + N + + V LPD + A+ +GD Sbjct: 176 VPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDFVTLPD-FTTEHYGIAVRKGDEAT 234 Query: 238 YNIVSWTHYAMVTAEELG 255 +++ + + E Sbjct: 235 VKMLNDALEKVRESGEYD 252 >gi|59801519|ref|YP_208231.1| ABC transporter, periplasmic histidine-binding protein precursor [Neisseria gonorrhoeae FA 1090] gi|194099507|ref|YP_002002631.1| Histidine-binding protein precursor [Neisseria gonorrhoeae NCCP11945] gi|240014879|ref|ZP_04721792.1| Histidine-binding protein precursor [Neisseria gonorrhoeae DGI18] gi|240017328|ref|ZP_04723868.1| Histidine-binding protein precursor [Neisseria gonorrhoeae FA6140] gi|240113751|ref|ZP_04728241.1| Histidine-binding protein precursor [Neisseria gonorrhoeae MS11] gi|240116484|ref|ZP_04730546.1| Histidine-binding protein precursor [Neisseria gonorrhoeae PID18] gi|240118700|ref|ZP_04732762.1| Histidine-binding protein precursor [Neisseria gonorrhoeae PID1] gi|240120946|ref|ZP_04733908.1| Histidine-binding protein precursor [Neisseria gonorrhoeae PID24-1] gi|240124247|ref|ZP_04737203.1| Histidine-binding protein precursor [Neisseria gonorrhoeae PID332] gi|254494502|ref|ZP_05107673.1| amino acid ABC transporter [Neisseria gonorrhoeae 1291] gi|260439765|ref|ZP_05793581.1| Histidine-binding protein precursor [Neisseria gonorrhoeae DGI2] gi|268599821|ref|ZP_06133988.1| amino acid ABC transporter [Neisseria gonorrhoeae MS11] gi|268602156|ref|ZP_06136323.1| amino acid ABC transporter [Neisseria gonorrhoeae PID18] gi|268604416|ref|ZP_06138583.1| amino acid ABC transporter [Neisseria gonorrhoeae PID1] gi|268682877|ref|ZP_06149739.1| amino acid ABC transporter [Neisseria gonorrhoeae PID332] gi|291043021|ref|ZP_06568756.1| histidine-binding protein [Neisseria gonorrhoeae DGI2] gi|59718414|gb|AAW89819.1| ABC transporter, periplasmic histidine-binding protein precursor [Neisseria gonorrhoeae FA 1090] gi|193934797|gb|ACF30621.1| Histidine-binding protein precursor [Neisseria gonorrhoeae NCCP11945] gi|226513542|gb|EEH62887.1| amino acid ABC transporter [Neisseria gonorrhoeae 1291] gi|268583952|gb|EEZ48628.1| amino acid ABC transporter [Neisseria gonorrhoeae MS11] gi|268586287|gb|EEZ50963.1| amino acid ABC transporter [Neisseria gonorrhoeae PID18] gi|268588547|gb|EEZ53223.1| amino acid ABC transporter [Neisseria gonorrhoeae PID1] gi|268623161|gb|EEZ55561.1| amino acid ABC transporter [Neisseria gonorrhoeae PID332] gi|291013061|gb|EFE05032.1| histidine-binding protein [Neisseria gonorrhoeae DGI2] Length = 268 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 87/258 (33%), Gaps = 11/258 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWKGF 59 M K ++ C + G + + N F + + G+ +GF Sbjct: 3 MKKWIAAALACSALALSACGGQGKDAAAPAANPGKVYRVASNAEFAPFESLDSKGNVEGF 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A++ A KI++ F AL + D++ T + + F Sbjct: 63 DVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGDADVVMSGVTITD--DRKQSMDFS 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q ++ K K +SS L + V G T + +++ N FE Sbjct: 118 DPYFEITQVVLVPKGKKVSSSEDLKKMNKVGVVTGHTGDFSVSKLLG--NDNPKIARFEN 175 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEW 237 V I D+ D + + N + + V LPD + A+ +GD Sbjct: 176 VPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDFVTLPD-FTTEHYGIAVRKGDEAT 234 Query: 238 YNIVSWTHYAMVTAEELG 255 +++ + + E Sbjct: 235 VKMLNDALEKVRESGEYD 252 >gi|325519853|gb|EGC99131.1| polar amino acid transport system substrate-binding protein [Burkholderia sp. TJI49] Length = 261 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 91/254 (35%), Gaps = 22/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + L SF+ + S ++ GI+ F + +G GFD Sbjct: 1 MNRIATLLVTALACAPLVSFAQDPST---------IRWGIDPTYPPFEAKQPDGSLTGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +K ++ N AL++++ D++ T R + F Sbjct: 52 IDLRNAICEQL---RAKCVWVEQNFDGMIPALRARKFDVIMSAMTATDER--LKQIDFSN 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + + S + L+G + + GTT ++ + + ++ Sbjct: 107 KLYASPAALVAPAGSKLQSTAASLAGKRVGIIQGTTQDMYAKAEWAPKG--VTIVSYQNQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +++ R DA D + L +R D I+ + + A + +GD Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTERGKHFAFAGDDITDARITGFGVAMGLRKGD 224 Query: 235 TEWYNIVSWTHYAM 248 T N ++ A+ Sbjct: 225 TAMKNRLNGAIAAI 238 >gi|284159968|ref|YP_001058140.2| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei 668] gi|283775063|gb|ABN81391.2| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Burkholderia pseudomallei 668] Length = 258 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I +K + P + Sbjct: 20 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NAKCTWTPQDLDGIIP 76 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149 AL++K+ D++ + T R + F Y I + SV L G + Sbjct: 77 ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVG 134 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E +++ + ++ +++ A + R DA D L Sbjct: 135 VEQGSTQETFAKAHWEPKG--VTIVSYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 192 Query: 210 RPSEHVILPDIISKSP------LAPAIIQGDTEWYNIVSWTH 245 R K P A + + D + ++ Sbjct: 193 RGKGFAWAG-PAVKDPRTLGDGTAMGLRKEDADLKEAINRAL 233 >gi|226949314|ref|YP_002804405.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A2 str. Kyoto] gi|226843538|gb|ACO86204.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A2 str. Kyoto] Length = 272 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 73/226 (32%), Gaps = 25/226 (11%) Query: 1 MYKDFFVSILCLIILFF-----------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49 M K + +II T+ + S + IK+ G L G + Sbjct: 1 MSKKILGKLGAIIISLTMVISLVACRKNTAGNEEKSKVDKIKESGKLVVGTCADYPPYEF 60 Query: 50 ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + + GFD+ + ++ + ++ + ALQS +DI+ + Sbjct: 61 HKTINGKDEIVGFDITIAKEIAKDLGVK---LEIKDMKFDGLLAALQSGNVDIVIAGMNP 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F I Y Q ++ + S+ + G I VQ GTT E + Sbjct: 118 TEDRKK--SVDFSKIYYQAIQSIVVRAEDKDKFKSLDEFKGKKIGVQKGTTQE----EVA 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 K +V ++ + + D + + Sbjct: 172 KKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGKN 217 >gi|167823233|ref|ZP_02454704.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei 9] Length = 258 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I +K + P + Sbjct: 20 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NAKCTWTPQDLDGIIP 76 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149 AL++K+ D++ + T R + F Y I + SV L G + Sbjct: 77 ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVG 134 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E +++ + ++ +++ A + R DA D L Sbjct: 135 VEQGSTQETFAKAHWEPKG--VTIVPYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 192 Query: 210 RPSEHVILPDIISKSP------LAPAIIQGDTEWYNIVSWTH 245 R K P A + + D + + ++ Sbjct: 193 RGKGFAWAG-PAVKDPRTLGDGTAMGLRKEDADLKDAINRAL 233 >gi|330429802|gb|AEC21136.1| arginine 3rd transport system periplasmic binding protein [Pusillimonas sp. T7-7] Length = 270 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 85/259 (32%), Gaps = 32/259 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F + L S A LK G G ++ V A+G GFD Sbjct: 1 MITTFLQKAVLGAGLALVGLSATADT---------LKIGTEGGYPPWSMVDASGKVSGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + D +++ +L + + D++ T R S + F Sbjct: 52 ADVGNALCKELDAD---CRFVVQAFDSLIPSLDANRFDLIISGMSVTPER--SKRITFSI 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-------LSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F++ K + + L+G ++ VQ GTT L + Sbjct: 107 PYAVEDAIFVLPKDSELITADSPEAIFKGLAGKTVGVQGGTTHGDYLRQKAG----DLNI 162 Query: 174 IVFERVEEIDAAYRAHRCDA-YTGDISALYALKLTNDRPSEHVILPDIISKSP------L 226 ++ ++++ A R DA + S LK D+ L S +P + Sbjct: 163 KNYDTLDQMQIDLDAGRLDATFADLTSQSKFLKKVGDKDFSLSKLVIKGSSAPEVLGYGI 222 Query: 227 APAIIQGDTEWYNIVSWTH 245 I + +TE V Sbjct: 223 GIGINKNNTELKEKVDAAL 241 >gi|315652801|ref|ZP_07905775.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium saburreum DSM 3986] gi|315485003|gb|EFU75411.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium saburreum DSM 3986] Length = 289 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 86/219 (39%), Gaps = 12/219 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +IKK G + G+ + F V NG+++G+D+ F L + I Y+ A Sbjct: 43 TLDEIKKSGTINIGVFSDKHPFGYVDENGEYQGYDIYFGNKLGEDLGVK---INYVSTEA 99 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLS 144 R L++ ++D++ N T R + F G G I + + S+ + + Sbjct: 100 ANRVEYLETGKVDLILANFTVTPERAE--AVDFALPYMNVGLGVISSESNKVDSLDNWNA 157 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 + V +GTT E + + ++ A A+ D + L Sbjct: 158 SDEMIVISGTTAEP----FMIKNYPNIKLQKYDTYANAKNALLNGSGKAWVNDNT--EVL 211 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 P V + D+ K +APA+ +G+T + V+ Sbjct: 212 AFAKSNPGYVVGIDDLGVKDTIAPAVTKGNTTLLDWVNS 250 >gi|107027773|ref|YP_625284.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia cenocepacia AU 1054] gi|116693517|ref|YP_839050.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia cenocepacia HI2424] gi|170737205|ref|YP_001778465.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia cenocepacia MC0-3] gi|105897147|gb|ABF80311.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116651517|gb|ABK12157.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] gi|169819393|gb|ACA93975.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia cenocepacia MC0-3] Length = 260 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 87/255 (34%), Gaps = 23/255 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ + + +L ++ S A K ++ G++ F A+G GFD Sbjct: 1 MKK--ILAAVTVALLAVSAGSAYA------KDWSTVRFGVDASYPPFESKGADGKVVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + I +K ++ + AL++++ D + + T R + F Sbjct: 53 VDLGNEICRRI---NAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPARAEQIA--FSS 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K + + L G S+ V+ GT E ++ + + + ++ Sbjct: 108 KLFNTPTRLVTKKGANLQPTAESLKGKSVGVEQGTIQETYAKAHWASKG--VNIVPYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL------APAIIQG 233 +++ A + R D D L R + P + + Sbjct: 166 DQVYADLISGRLDGALQDAVQAEIGFLKTPRGANFDFAGK-DLDDPKTLGNGAGIGLRKE 224 Query: 234 DTEWYNIVSWTHYAM 248 DT+ + M Sbjct: 225 DTDLKAKIDGAIAGM 239 >gi|264678000|ref|YP_003277907.1| glutamate-binding protein precursor [Comamonas testosteroni CNB-2] gi|262208513|gb|ACY32611.1| glutamate-binding protein precursor [Comamonas testosteroni CNB-2] Length = 300 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 90/230 (39%), Gaps = 9/230 (3%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRA 66 +++ + + +++ IK+ G L+ G F+ + +G +GFD+ + Sbjct: 36 ALVAQGPVADAATIASSTWASKIKQAGTLRLGSTQTSNLFSLLNEKDGKIRGFDLGLAQL 95 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ I D +K Q+ + + R L + Q+D++ T R ++F Y Sbjct: 96 ITRYILGDAAKYQFTQVTSSTREQVLINNQVDMVFATYSITPARAE--KISFAGPYYTSQ 153 Query: 127 QGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G ++ + S + L G + QAG+T LA Y F+ +E A Sbjct: 154 SGVLVKSNNKTVQSYNDLGGKKVATQAGSTGPAILAQYAPKA----VVQEFQTHQEALDA 209 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 R R DAY D + L L+ + + ++ P + +G Sbjct: 210 LRQGRVDAYVTDYTLLL-NALSLGTSNARLAGAPFGAQDPYGVGLPKGSD 258 >gi|226948690|ref|YP_002803781.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A2 str. Kyoto] gi|226843304|gb|ACO85970.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A2 str. Kyoto] Length = 268 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 79/257 (30%), Gaps = 20/257 (7%) Query: 1 MYKDFFVSIL----CLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEV 50 M K +S+L C+I S IK +G L G+ F Sbjct: 1 MSKKKILSVLFIVVCIISFTLIGCGQKNSSNGKDSSYSKIKDKGQLVVGLCAQYPPFESR 60 Query: 51 KAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 G+ +GFDVD + L + K++ + + D+L Sbjct: 61 NDKTGEIEGFDVDLAKELGKEM---DLKVEIKDAEWEALLGGVNKGDYDVLITCMSKKEA 117 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 E ++ + D + I + L G + VQ T++E + + Sbjct: 118 AEANINTSDTY-YKLDDIIVVNKNNNFIHNKGDLKGKVVGVQTSTSSEQVV----DKLDG 172 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + R E + +R DA A A + + + I+ + S + Sbjct: 173 IKEIKRYNRNPEAFIDLKNNRIDAVVVG-YAYAATTMKDKKDDNLKIINSPVGSSDIVMV 231 Query: 230 IIQGDTEWYNIVSWTHY 246 +G + ++ Sbjct: 232 TKKGSDDLTKELNKALK 248 >gi|206562619|ref|YP_002233382.1| periplasmic lysine-arginine-ornithine-binding protein [Burkholderia cenocepacia J2315] gi|198038659|emb|CAR54619.1| periplasmic lysine-arginine-ornithine-binding protein [Burkholderia cenocepacia J2315] Length = 257 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 73/219 (33%), Gaps = 19/219 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L + + + S ++ G++ F A+G GFD Sbjct: 1 MKK--LALSIALACLAVGAHAKDWST---------IRFGVDASYPPFESKDASGKVVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + + +K ++ + AL++K+ D + + T R + F Sbjct: 50 VDLGNEICARL---KAKCVWIENDFDGMIPALKAKKFDGVLSSMSMTPARAEQIA--FSD 104 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K + + L G S+ V+ GT E Y+ + ++ Sbjct: 105 KLFNTPTRLVAKKGANLQPTAESLKGKSVGVEQGTIQETYAKAYWAPKG--VQVVPYQNQ 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 + + + R DA D L R + Sbjct: 163 DGVYQDLMSGRLDAALQDAVQADIGFLKTPRGANFQFAG 201 >gi|148379387|ref|YP_001253928.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A str. ATCC 3502] gi|153933854|ref|YP_001383763.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A str. ATCC 19397] gi|153936568|ref|YP_001387313.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A str. Hall] gi|168180086|ref|ZP_02614750.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum NCTC 2916] gi|148288871|emb|CAL82955.1| putative ABC transporter, substrate-binding lipoprotein [Clostridium botulinum A str. ATCC 3502] gi|152929898|gb|ABS35398.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A str. ATCC 19397] gi|152932482|gb|ABS37981.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A str. Hall] gi|182669146|gb|EDT81122.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum NCTC 2916] gi|322805727|emb|CBZ03292.1| glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2) [Clostridium botulinum H04402 065] Length = 268 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 79/257 (30%), Gaps = 20/257 (7%) Query: 1 MYKDFFVSIL----CLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEV 50 M K +S+L C+I S IK +G L G+ F Sbjct: 1 MSKKKILSVLFIVVCIISFTLIGCGQKNSSNGKDSSYSKIKDKGQLVVGLCAQYPPFESR 60 Query: 51 KAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 G+ +GFDVD + L + K++ + + D+L Sbjct: 61 NDKTGEIEGFDVDLAKELGKEM---DLKVEIKDAEWEALLGGVNKGDYDVLITCMSKKEA 117 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 E ++ + D + I + L G + VQ T++E + + Sbjct: 118 AEANINTSDTY-YKLDDIIVVNKNNNFIHNKGDLKGKVVGVQTSTSSEQVV----DKLDG 172 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + R E + +R DA A A + + + I+ + S + Sbjct: 173 IKEIKRYNRNPEAFIDLKNNRIDAVVVG-YAYAATTMKDKKDDNLKIINSPVGSSDIVMV 231 Query: 230 IIQGDTEWYNIVSWTHY 246 +G + ++ Sbjct: 232 TKKGSDDLTKELNKALK 248 >gi|145297726|ref|YP_001140567.1| ABC-type arginine transporter, periplasmic binding protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142850498|gb|ABO88819.1| ABC-type arginine transporter, periplasmic binding protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 245 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 30/209 (14%), Positives = 66/209 (31%), Gaps = 21/209 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + +L + + +K F + +++GFD Sbjct: 1 MKKSLLL-VAAMGLLSTSVLA------------KEIKFATEATYAPFEYLDDKNEFQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D RA+ + + + + +L+ ++ D D T R + F Sbjct: 48 IDLARAICTQV---KLECSFHNQAFDSLIPSLKFRRYDAAIAAMDVTPERAA--QVDFSD 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y + F+ K L ++ VQ G++ + L D + + + + + Sbjct: 103 IYYENSAVFVAKKGTF-KGPEDLVDKTVGVQNGSSHQSYLVDNWISKG--LLTVPYASYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND 209 R D D + + Sbjct: 160 SAFLDMMNGRTDGVFADTAVAADWLKQHK 188 >gi|150389460|ref|YP_001319509.1| extracellular solute-binding protein [Alkaliphilus metalliredigens QYMF] gi|149949322|gb|ABR47850.1| extracellular solute-binding protein, family 3 [Alkaliphilus metalliredigens QYMF] Length = 275 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 38/262 (14%), Positives = 88/262 (33%), Gaps = 29/262 (11%) Query: 1 MYKDF-------FVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAE 49 M K F V++ +I++ S + AS L ++ G L G + + Sbjct: 1 MKKGFGKFIKIGIVALSLIILVTGCSQAPGASSEQSKLEAVQSSGKLVLGTSADYPPYEF 60 Query: 50 ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 V GFD++ + ++ + + ++ ++ AL + ID++ Sbjct: 61 YAEVDGALQVVGFDIEIAKEIAKDMGVE---LEIRDMDFDGLLSALVTGNIDMIIAGMVP 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYF 164 + R+ + F Y Q ++ S+V +G ++ Q T E + Sbjct: 118 SDERKK--SVDFSVPYYSAEQTMVVRAADFDKFSTVEDFTGLTVGAQTATIQEEIAKEQI 175 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + ++ + +R D A + + V+ + Sbjct: 176 A----NAELRTLSVITDLVMDLKTNRIDGVVLVEPVAKAY---AENNDDVVVSQLHFGQE 228 Query: 225 P-LAPAIIQGDTEWYNIVSWTH 245 +A A+ + ++ N ++ T Sbjct: 229 DGVAVAVAKDTDDFLNSINTTL 250 >gi|261821244|ref|YP_003259350.1| cationic amino acid ABC transporter periplasmic protein [Pectobacterium wasabiae WPP163] gi|261605257|gb|ACX87743.1| cationic amino acid ABC transporter, periplasmic binding protein [Pectobacterium wasabiae WPP163] Length = 243 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 81/252 (32%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L I T+ ++ + F + A+ + GFD Sbjct: 1 MKKLVLATLLAGIAFSATAA-------------DTIRFASSATYPPFESLDASNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + AL+ ++ D + D T R S + F Sbjct: 48 MDLAKALCKQM---QATCTFTNQAFDSLIPALKFRRYDAVISGMDITPER--SKQVTFTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K S + + G I ++ GTT + + D + ++ + Sbjct: 103 PYYANSAVVIAQKG-KFSDFAAMKGKRIGMENGTTHQKYMHDKHPE----VQTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + T+ P + + L A+ D Sbjct: 158 NAVLDLKNGRIDGVFGDTAVVNEWIKTS--PELATVGEHVTDAEYFGTGLGIAVRPDDKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNKALDAI 227 >gi|171322525|ref|ZP_02911317.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia ambifaria MEX-5] gi|171092140|gb|EDT37549.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia ambifaria MEX-5] Length = 258 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 78/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I K ++ + Sbjct: 20 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI---NVKCVWVAQDLDGIIP 76 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149 AL++K+ D++ + T R + F Y I + +V+ L G + Sbjct: 77 ALKAKKYDVIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKAGSPLLPTVASLKGKHVG 134 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E Y++ + ++ +++ + R DA D L Sbjct: 135 VEQGSTQETYAKAYWEPQG--VTVVPYQNQDQVYTDLGSGRLDATLQDELQADYGFLRTP 192 Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245 R K P A + + DT+ ++ Sbjct: 193 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKLRINKAL 233 >gi|317047529|ref|YP_004115177.1| cationic amino acid ABC transporter periplasmic-binding protein [Pantoea sp. At-9b] gi|316949146|gb|ADU68621.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. At-9b] Length = 243 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 76/213 (35%), Gaps = 12/213 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ F V ++ +GFDVD AL I + + +L+ Sbjct: 22 TLRFATEASYPPFEFVDSDNKIQGFDVDLANALCKEI---DATCTFTNQAFDSLIPSLKF 78 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 ++ D + D T RE + F Y + FI K ++ V+ L G + VQ GT Sbjct: 79 RRFDAVMAGMDITPEREK--QVLFTKPYYDNSAIFIAQKG-KLADVAALKGKRVGVQNGT 135 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T + L+D + + ++ + + R DA GD + + N + Sbjct: 136 THQKYLSD----KHSDITVVPYDSYQNAILDLKNGRIDAVFGDTAVVNEWLKQNPNLAAL 191 Query: 215 --VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + L A+ G+TE + Sbjct: 192 GDKVTDKAYFGTGLGIAVRMGNTELQEKFNAAL 224 >gi|50121595|ref|YP_050762.1| arginine-binding periplasmic protein 2 [Pectobacterium atrosepticum SCRI1043] gi|49612121|emb|CAG75571.1| arginine-binding periplasmic protein 2 [Pectobacterium atrosepticum SCRI1043] Length = 243 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 80/252 (31%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L I T+ ++ + F + A+ + GFD Sbjct: 1 MKKLVLATLLAGITFSATAA-------------DTIRFASSATYPPFESLDASNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + AL+ ++ D + D T R + F Sbjct: 48 MDLAKALCKQM---QATCTFTNQAFDSLIPALKFRRYDAVISGMDITPERSKQVA--FTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K S + + G I ++ GTT + + D + + + ++ + Sbjct: 103 PYYANSAVVIAQKG-KFSDFAAMKGKRIGMENGTTHQKYMHD----KHTEVQTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P + + L A+ D Sbjct: 158 NAVLDLKNGRIDGVFGDTAVVNEWI--KTNPELATVGEHVTDAEYFGTGLGIAVRPDDKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNKALDAI 227 >gi|304387902|ref|ZP_07370076.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Neisseria meningitidis ATCC 13091] gi|261392846|emb|CAX50427.1| putative amino acid ABC transporter binding lipoprotein [Neisseria meningitidis 8013] gi|304338167|gb|EFM04303.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Neisseria meningitidis ATCC 13091] gi|325135990|gb|EGC58600.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria meningitidis M0579] gi|325198006|gb|ADY93462.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria meningitidis G2136] gi|325202417|gb|ADY97871.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria meningitidis M01-240149] gi|325206371|gb|ADZ01824.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria meningitidis M04-240196] gi|325207831|gb|ADZ03283.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria meningitidis NZ-05/33] Length = 275 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 66/224 (29%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L + + S++ I +G + G Sbjct: 2 MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAVSGSLIERINNKGTVTVGTEGTYAP 61 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 62 FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 118 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + I S+ + G + KA Sbjct: 119 T-SPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTAQSLTSNYGE------KA 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 172 KAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215 >gi|15805591|ref|NP_294287.1| amino acid ABC transporter periplasmic amino acid-binding protein [Deinococcus radiodurans R1] gi|6458259|gb|AAF10144.1|AE001914_6 amino acid ABC transporter, periplasmic amino acid-binding protein [Deinococcus radiodurans R1] Length = 261 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 72/215 (33%), Gaps = 10/215 (4%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G LK + F G+ GFDVD +A++ + P ++ LQ Sbjct: 36 GTLKIAMEGTYPPFTSKNEQGELVGFDVDIAKAVAQKLNLKPE---FVLTEWSGILAGLQ 92 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 + + D++ T R+ S+G + + S++ L G + G Sbjct: 93 ANKYDVIVNQVGITPERQNSIGFSQPYAYSRPEIIVAKNNTFNPQSLADLKGKRVGSTLG 152 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 + E L D + + EI A A R DA D + + P Sbjct: 153 SNYEKQLIDT-----GDIKIVTYPGAPEILADLVAGRIDAAYNDRLVVNYIINDQKLPV- 206 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 I +P+ A+ +G++ + + M Sbjct: 207 -RGAGQIGDAAPVGIALKKGNSALKDQIDKALTEM 240 >gi|121634581|ref|YP_974826.1| putative amino acid permease substrate-binding protein [Neisseria meningitidis FAM18] gi|218767906|ref|YP_002342418.1| putative amino acid permease substrate-binding protein [Neisseria meningitidis Z2491] gi|120866287|emb|CAM10028.1| putative amino acid permease substrate-binding protein [Neisseria meningitidis FAM18] gi|121051914|emb|CAM08220.1| putative amino acid permease substrate-binding protein [Neisseria meningitidis Z2491] gi|325131979|gb|EGC54678.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria meningitidis M6190] gi|325137810|gb|EGC60385.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria meningitidis ES14902] Length = 275 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 66/224 (29%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L + + S++ I +G + G Sbjct: 2 MLKKFVLGGIAALVLAACGGSESGSGASSAPAQSAVSGSLIERINNKGTVTVGTEGTYAP 61 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 62 FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 118 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + I S+ + G + KA Sbjct: 119 T-SPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTAQSLTSNYGE------KA 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 172 KAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215 >gi|320538106|ref|ZP_08038003.1| bacterial extracellular solute-binding protein, family 3 [Treponema phagedenis F0421] gi|320145040|gb|EFW36759.1| bacterial extracellular solute-binding protein, family 3 [Treponema phagedenis F0421] Length = 274 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 37/261 (14%), Positives = 82/261 (31%), Gaps = 24/261 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55 M K L + + S IK+ G + G + + + Sbjct: 1 MKKIIQGIALFALFFIPVACGGGEKKSKYTSIKEEGKIVLGTSADYPPYEFHLQKDGKDE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+ + ++ + + + ++ AL + +D++ T RE Sbjct: 61 IVGFDISIAKEIAKDLGVE---LVIKDMDFDGLLAALATGTVDMVLAGMTPTPERE--QN 115 Query: 116 LAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELTLADYFKA------ 166 + F I Y QG ++ SS L + Q GT K Sbjct: 116 VDFSNIYYIAEQGVLIRSADAALYGSSSESLKDKMLGAQRGTVQVEIAKKEIKGVAEKDL 175 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS--EHVILPDIISKS 224 + ++ +I + + DA ++ + + + + + + Sbjct: 176 EDPHAQIKELAKIPDIVMELKNKKVDAVIMELPVAESYQQAHSDLTLAAYTFKDESGGS- 234 Query: 225 PLAPAIIQGDTEWYNIVSWTH 245 A A+ +G+ E ++++ T Sbjct: 235 --AIAVKKGENELLDVINKTI 253 >gi|303253497|ref|ZP_07339637.1| amino acid ABC transporter, substrate-binding [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|303253757|ref|ZP_07339893.1| amino acid ABC transporter, substrate-binding [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248706|ref|ZP_07530719.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302647413|gb|EFL77633.1| amino acid ABC transporter, substrate-binding [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302647650|gb|EFL77866.1| amino acid ABC transporter, substrate-binding [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854633|gb|EFM86823.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 260 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 79/247 (31%), Gaps = 13/247 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K V + I L ++ S L I +G + G F A+G G+ Sbjct: 1 MLKKLSVIAVSAIALATSATSLAKETLLERINAKGTITVGTEGTYAPFTYHDASGKLTGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ RA++ + + + L++ + D+++ T E Sbjct: 61 DVEVTRAVAEKLGVK---VDFKETQWDAMLAGLKADRFDLVANQVGLT-TPERQATFDKS 116 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G ++ + I S + G Q ++ LA A + + Sbjct: 117 AAYSWSGAALVVRNDEQKIKQASDVKGVKTA-QTLSSNYGELARANGA-----DIVPIDG 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + + R DA D AL N +P ++ +G+ E Sbjct: 171 MAQGLLLIQQKRADATFNDNLALLDYLKKNPKPGLKIVWESPEKVDA-GFIANKGNQEAL 229 Query: 239 NIVSWTH 245 N +S Sbjct: 230 NKISAAI 236 >gi|206576547|ref|YP_002237300.1| histidine ABC transporter, periplasmic histidine-binding protein [Klebsiella pneumoniae 342] gi|206565605|gb|ACI07381.1| histidine ABC transporter, periplasmic histidine-binding protein [Klebsiella pneumoniae 342] Length = 260 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 87/245 (35%), Gaps = 20/245 (8%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ G + F A G+ GFD+D + L I ++ ++ +L++ Sbjct: 27 KIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153 K+ID + + T R +AF Y ++ K + ++ L G + V G Sbjct: 84 KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVKKGSPVTPDLATLKGKRVGVLQG 141 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT E +++ + + ++ + I + A R DA D A L + Sbjct: 142 TTQETYGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPIGKD 199 Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + I L + + D E ++ AE ++++K Sbjct: 200 YQFGGPSIKDEKLFGVGTGMGLRKEDNELREALNKAF-----AEMRK--DGTYDKMAKKY 252 Query: 269 TNPDV 273 + +V Sbjct: 253 FDFNV 257 >gi|167855089|ref|ZP_02477862.1| putative amino-acid ABC transporter-binding protein [Haemophilus parasuis 29755] gi|167853827|gb|EDS25068.1| putative amino-acid ABC transporter-binding protein [Haemophilus parasuis 29755] Length = 260 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 69/212 (32%), Gaps = 12/212 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M+K + L L +F ++ + S+L I +G + G F A+G G+ Sbjct: 1 MFKKLSIVALSLAAVFTSTTALAKESLLDRINNKGTITVGTEGTYAPFTYHDASGKLTGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ RA++ + + + L+ ++ DI++ T E Sbjct: 61 DVEVTRAVAEKLGVK---VDFKETQWDAMLAGLKGERFDIVANQVGLT-TPERQATFDKS 116 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G + +S + G Q ++ LA A + + Sbjct: 117 AEYSWSGAMLLARNDETRVSKAEDVKGLK-AAQTLSSNYGELAQKNGA-----EIVAVDG 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + R D D AL N Sbjct: 171 MAQALLLLQQKRADVTFNDSLALLDYLKKNPN 202 >gi|666981|emb|CAA54724.1| putative amino acid binding subunit [Bacillus subtilis subsp. subtilis str. JH642] Length = 268 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 79/263 (30%), Gaps = 26/263 (9%) Query: 1 MYKDFFVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFAE 49 M K + + I + + + IKK+G L G F Sbjct: 1 MKKALLALFMVVSIAALAACGAGNDNQSKDNAKDGDLWASIKKKGVLTVGTEGTYEPFTY 60 Query: 50 VKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + G+DV+ +++++ K+ + F L SK+ D+++ T Sbjct: 61 HDKDTDKLTGYDVEVITEVANSLG---LKVDFKETQWDSMFAGLNSKRFDVVANQVGKT- 116 Query: 109 LREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 + F + K I S + + G + Q+ T+ LA A Sbjct: 117 --DRENQYDFSDKYTTSRAVVVTKKDNNDIKSEADVKGKTSA-QSLTSNYNKLATNAGAK 173 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 E + + + R D D A+ T+ + + +S Sbjct: 174 -----VEGVEGMAQALQMIQQGRVDMTYNDKLAVLNYLKTSGNKNVKIAFETGEPQSTY- 227 Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250 +G E + V+ M Sbjct: 228 FTFRKGSGEVVDQVNKALKEMKE 250 >gi|239999700|ref|ZP_04719624.1| Histidine-binding protein precursor [Neisseria gonorrhoeae 35/02] gi|268595514|ref|ZP_06129681.1| histidine-binding protein [Neisseria gonorrhoeae 35/02] gi|584826|sp|Q06758|HISJ_NEIGO RecName: Full=Histidine-binding protein; Short=HBP; Flags: Precursor gi|49068|emb|CAA45768.1| unnamed protein product [Neisseria gonorrhoeae] gi|268548903|gb|EEZ44321.1| histidine-binding protein [Neisseria gonorrhoeae 35/02] gi|317165013|gb|ADV08554.1| ABC transporter, periplasmic histidine-binding protein precursor [Neisseria gonorrhoeae TCDC-NG08107] Length = 268 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 87/258 (33%), Gaps = 11/258 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWKGF 59 M K ++ C + G + + N F + + G+ +GF Sbjct: 3 MKKWIAAALACSALALSACGGQGKDAAAPAANPGKVYRVASNAEFAPFESLDSKGNVEGF 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A++ A KI++ F AL + DI+ T + + F Sbjct: 63 DVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGDADIVMSGVTITD--DRKQSMDFS 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q ++ K K +SS L + V G T + +++ N FE Sbjct: 118 DPYFEITQVVLVPKGKKVSSSDDLKKMNKVGVVTGHTGDFSVSKLLG--NDNPKIARFEN 175 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEW 237 V I D+ D + + N + + V LPD + A+ +GD Sbjct: 176 VPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDFVTLPD-FTTEHYGIAVRKGDEAT 234 Query: 238 YNIVSWTHYAMVTAEELG 255 +++ + + E Sbjct: 235 VKMLNDALEKVRESGEYD 252 >gi|226315383|ref|YP_002775279.1| glutamine ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] gi|226098333|dbj|BAH46775.1| glutamine ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] Length = 258 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 94/247 (38%), Gaps = 10/247 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L+ L ++ T G + F + +G + G D Sbjct: 1 MKKLMFAVVSGLLALTVSACGTGTDQAASTSGAKKYVFGTDATYPPFEF-EKDGKYVGID 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + +++ P++ K A+Q+KQ+D R+ L F Sbjct: 60 IDLINAIAKE---EGFEVEIKPMDFKGIIPAVQAKQLDGAIAGISINDKRKEI--LDFSE 114 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ + I+ + L+G +I ++ GTT + + + F+ Sbjct: 115 PYYQAGLSLVVREDNTTINGEADLAGKTIAIKKGTTGATFADELGQKYG--ATVKYFDDS 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + D D + + K+T D S+ I+ D ++ A+++G+ E + Sbjct: 173 PSMFQEVQNGNADVTIEDYPVI-SYKITVDPASKLKIVGDRLNGDHYGIAVLKGNKELQD 231 Query: 240 IVSWTHY 246 ++ Sbjct: 232 KLNSGLK 238 >gi|331085657|ref|ZP_08334740.1| hypothetical protein HMPREF0987_01043 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406580|gb|EGG86085.1| hypothetical protein HMPREF0987_01043 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 245 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 78/253 (30%), Gaps = 22/253 (8%) Query: 1 MYKDFFVSILCLIILFFTSFS---------TNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M ++ + ++ + I + ++ + G + + + Sbjct: 1 MKRNLAIFLMGMTIATMVLGGCKDKENISKKDGKESESVEDKKTFTVGFDAEYPPYGYMD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 NG++ GFD++ A+ + K P+N + + L S ID + E Sbjct: 61 ENGEYTGFDLELAEAVCELEGWELVK---KPINWDSKDMELNSGAIDCIWNGFTMNGREE 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD-----YFKA 166 F + Q ++ +K G+ ++ L G S+ VQA + L Sbjct: 118 E---YTFSTPYVDNSQVIVVAEKSGMKTLEDLQGKSVGVQAASAALDLLQSEEEGGQKAL 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + F +A DA D A R + IL + ++ Sbjct: 175 ADTFSALNEFADYNTAFTELQAGALDALAID--VGVANYQIKSRGEGYQILEETLNTEQY 232 Query: 227 APAIIQGDTEWYN 239 A + + Sbjct: 233 AIGFKKEIRNYAM 245 >gi|170690823|ref|ZP_02881989.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170144072|gb|EDT12234.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 256 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 85/252 (33%), Gaps = 19/252 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + L +F+ + L+ GI+ +G KGFD Sbjct: 1 MKLPLMMIVSAALALSSGAFAAGSDT---------LRLGIDPSYPPMDSKSPDGSLKGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + I ++ Q++ L ALQ+++ID + + T RE + F Sbjct: 52 VDLGNEICRRI---KARCQWVELEFSGMIPALQARKIDAILSSMAITQKRE--QQILFTS 106 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I + + + + LSG I VQ+GT E + H + ++ Sbjct: 107 KLFQFKSRLIARQGSPLAAGLQALSGKQIGVQSGTQFEGYALKNWTPLG--AHVVAYKSQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E+ A + R D L + + +S I E Sbjct: 165 DEVFADLQNGRLDGALLGSVEADFGFLRTPSGKGFAFVGEPLSMGDRGTGIGLRKDE--T 222 Query: 240 IVSWTHYAMVTA 251 V + A + A Sbjct: 223 AVQASMNAAIAA 234 >gi|15676685|ref|NP_273829.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis MC58] gi|7226019|gb|AAF41200.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis MC58] Length = 275 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 68/224 (30%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L + + S++ I +G + G Sbjct: 2 MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAVSGSLIERINNKGTVTVGTEGTYAP 61 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 62 FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 118 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G ++ I S++ + G + KA Sbjct: 119 T-SPERQATFDKSDPYSWSGAVLVVRNDSNIKSIADIKGVKTAQSLTSNYGE------KA 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 172 KAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215 >gi|295090528|emb|CBK76635.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Clostridium cf. saccharolyticum K10] Length = 282 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 77/212 (36%), Gaps = 14/212 (6%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G L G N + + G DV+ A+ + D +Q + AL Sbjct: 65 GTLIMGTNATFPPYEYYDGD-AIVGIDVEIAEAIGEKLGMD---VQVEDMEFDALIPALV 120 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 S ++D ++ T RE + F Q I+ + I+SV L+G + VQ G Sbjct: 121 SDKVDFVAAGMTVTPDREA--SVNFTDTYATAAQVIIVKEGSDIASVDDLAGKVVGVQLG 178 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT +L +++ + + E + + DA D K + Sbjct: 179 TTGDLLVSEI-----EGTTVERYNKGFEAVQSVTQGKIDAVVIDN---APAKNFVAQGDG 230 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 VIL + +S A A+ + +TE ++ Sbjct: 231 LVILEEALSSEDYAMAVNKDNTELLEQINGAI 262 >gi|227529476|ref|ZP_03959525.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus vaginalis ATCC 49540] gi|227350561|gb|EEJ40852.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus vaginalis ATCC 49540] Length = 263 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 70/215 (32%), Gaps = 18/215 (8%) Query: 1 MY--KDFFVSILCLIILFFTS----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K V++ + + + ++ + ++K++G L G+ ++ N Sbjct: 1 MKIWKKVLVTLAAVTVGTTAGISSIHAASSQVNSELKQKGELTIGLEGTYSPYSYR-KNN 59 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GF+VD +A++ + +++P L S + D++ N T R Sbjct: 60 KLTGFEVDLGKAVAKEMGLKA---KFVPSKWDSLVAGLGSGKYDVVMNNITQTPERAK-- 114 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F I+ K I ++ Q+SG I GT + + Sbjct: 115 KYNFSTPYIKSRYVLIVPKDSKIKNLKQISGKKIVAGTGTNNADVV------KKYHGTLV 168 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 A + R + A YA N Sbjct: 169 PNGEFSNSVAMVKQGRAEGTVNSREAWYAYSKKNS 203 >gi|319782449|ref|YP_004141925.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168337|gb|ADV11875.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 268 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 48/223 (21%), Positives = 82/223 (36%), Gaps = 11/223 (4%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L DI KRG L+ + T F+ V ANG+ G V+ ++ + + + + + Sbjct: 30 TLDDITKRGELRVAVQTQGPPFSLVGANGERTGSSVELAELMAKEMGVKITFLDF---DW 86 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-- 143 AL S + D+L + TL R + +AF + G + Sbjct: 87 DGLIPALLSGKADLLVADMTPTLAR--GMKVAFTTPYMYTGSTVFTKADSKFKTTEDCKA 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G I V G T E + F ++K + A + D D+SA+ Sbjct: 145 KGTKIAVLLGATGEKEAKNAFPDADIKS---YKGGGPLLLDAVNNGQADCGVNDVSAVKG 201 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + I+PD++SK PLA A + + ++ Sbjct: 202 QSTAYPAGT-FTIMPDLLSKEPLAFATRYDEPDLLIWMNLFLN 243 >gi|269968267|ref|ZP_06182293.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|269827124|gb|EEZ81432.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 253 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 80/259 (30%), Gaps = 26/259 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K V + L +F + K+ ++ + F+ G +GF+VD Sbjct: 2 KWIVVLFISLFSVFSHA-----------KEWKQIRFTVEGAYPPFSWTTKEGKLEGFEVD 50 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 AL + K ++ +L S++ D + T RE + F Sbjct: 51 LANALCKEL---EVKCVISKMDWDGIIPSLLSRKNDAIIAAMTITEEREK--KVDFTVPY 105 Query: 123 YFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 F+M + I L+ SI VQ T + L+ A + +E Sbjct: 106 AKVPTRFVMKNDREINMDDGSLNRLSIGVQRATIGDKYLS----ALYPDIDIRRYGTFDE 161 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTE 236 R DA G L A L + + ++ A+ + D E Sbjct: 162 AFTDLLNGRLDAVFGGSIGLSAGFLETAQGEGYHFTGPAFTEEKWFGRGIGVAVRKQDKE 221 Query: 237 WYNIVSWTHYAMVTAEELG 255 ++ ++ + + Sbjct: 222 LKALLDSGIQKLIQSGKHK 240 >gi|289676780|ref|ZP_06497670.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. syringae FF5] gi|330981545|gb|EGH79648.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 260 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 86/252 (34%), Gaps = 19/252 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + + K+ L+ G++ F A+G GFD Sbjct: 1 MKKAWLTLSALAL------CIAAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +++ + L++++ D + + T RE + F Sbjct: 53 IDLGNAICKEL---KVTCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IDFSN 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K G + + L G ++ + GT E + + Sbjct: 108 ELFSGPTSLVFKKGAGFTADPASLKGKTVGYEQGTIQEAYAKAVLDKAGISTK--AYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTE 236 +++ + + R DA D+ L + +++ + + + A I QG+ E Sbjct: 166 DQVYSDLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPIDSELLPAKTAIGIAQGNKE 225 Query: 237 WYNIVSWTHYAM 248 ++ AM Sbjct: 226 LKALLDKGIKAM 237 >gi|15677462|ref|NP_274618.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis MC58] gi|7226862|gb|AAF41964.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis MC58] gi|316983864|gb|EFV62844.1| bacterial extracellular solute-binding s, family 3 family protein [Neisseria meningitidis H44/76] gi|325134711|gb|EGC57350.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis M13399] gi|325140742|gb|EGC63256.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis CU385] gi|325199793|gb|ADY95248.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis H44/76] Length = 268 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 44/238 (18%), Positives = 83/238 (34%), Gaps = 15/238 (6%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + A+ + + N F + + G+ +GFDVD A++ A KI+ Sbjct: 28 TAAPAANPDKV-----YRVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIE 79 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + F AL + D++ T + + F + Q ++ K K +SS Sbjct: 80 FKHQPWDSLFPALNNGDADVVMSGVTITD--DRKQSMDFSDPYFEITQVVLVPKGKKVSS 137 Query: 140 VSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L + V G T + +++ N FE V I D+ D Sbjct: 138 SEDLKNMNKVGVVTGYTGDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDS 195 Query: 199 SALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + N + + V LPD + A+ +GD +++ + + E Sbjct: 196 AVIANYVKNNPAKGMDFVTLPD-FTTEHYGIAVRKGDEATVKMLNDALEKVRESGEYD 252 >gi|325521713|gb|EGD00469.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. TJI49] Length = 258 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I K ++ + Sbjct: 20 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI---DVKCVWVAQDLDGIIP 76 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149 AL++K+ DI+ + T R + F Y I + +V+ L G + Sbjct: 77 ALKAKKYDIIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKAGSPLLPTVASLKGKRVG 134 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E Y++ I ++ +++ + R DA D L Sbjct: 135 VEQGSTQESYAKAYWEPAG--VTVIPYQNQDQVYTDLGSGRLDATLQDELQADYGFLRTP 192 Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245 R K P A + + DT+ ++ Sbjct: 193 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKLKINKAL 233 >gi|315656553|ref|ZP_07909440.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492508|gb|EFU82112.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 319 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 33/254 (12%), Positives = 72/254 (28%), Gaps = 17/254 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASIL-----GDIKKR--GFLKCGINTGLVGFAEVKAN- 53 K V+ + + AS ++ K G + + Sbjct: 48 KKIVSVAAGFALAFSLAGCGSAASNNAGNAGDNVAKSAGDKFVVGFDANFPPYGYKDEKT 107 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G++ GFD+D ++ + ++ P++ + + L S +D L + Sbjct: 108 GEYTGFDMDLATEVAKR---NHWTLEKKPIDWDSKDMQLSSGSVDCLWNGFTMNGREDK- 163 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH--NMKY 171 + + F+ + + L+G ++ VQA ++ L D Sbjct: 164 --YTWSKPYVDNSIVFVTRSADNLKDAADLAGKTVIVQADSSGLAALEDESNKELLASFK 221 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + A DA D+ T + + I+ + Sbjct: 222 TLNKVPDYNNAFMSLEAGAADAVVVDLGVANYQLETRQKGM-YTIMEKPVQTEQYGIGFK 280 Query: 232 QGDTEWYNIVSWTH 245 G+ + V T Sbjct: 281 LGNKALRDQVQTTL 294 >gi|293398356|ref|ZP_06642547.1| histidine-binding protein [Neisseria gonorrhoeae F62] gi|291611280|gb|EFF40364.1| histidine-binding protein [Neisseria gonorrhoeae F62] Length = 268 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 87/258 (33%), Gaps = 11/258 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWKGF 59 M K ++ C + G + + N F + + G+ +GF Sbjct: 3 MKKWIAAALACSALALSACGGQGKDAAAPAANPGKVYRVASNAEFAPFESLDSKGNVEGF 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A++ A KI++ F AL + D++ T + + F Sbjct: 63 DVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGDADVVMSGVTITD--DRKQSMDFS 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q ++ K K +SS L + V G T + +++ N FE Sbjct: 118 DPYFEITQVVLVPKGKKVSSSDDLKKMNKVGVVTGHTGDFSVSKLLG--NDNPKIARFEN 175 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEW 237 V I D+ D + + N + + V LPD + A+ +G+ Sbjct: 176 VPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDFVTLPD-FTTEHYGIAVRKGNEAT 234 Query: 238 YNIVSWTHYAMVTAEELG 255 +++ + + E Sbjct: 235 VKMLNDALEKVRESGEYD 252 >gi|187779363|ref|ZP_02995836.1| hypothetical protein CLOSPO_02959 [Clostridium sporogenes ATCC 15579] gi|187772988|gb|EDU36790.1| hypothetical protein CLOSPO_02959 [Clostridium sporogenes ATCC 15579] Length = 272 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 70/226 (30%), Gaps = 25/226 (11%) Query: 1 MYKDFFVSILCLIILFF-----------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49 M K + +II T+ + S + IK+ G L G + Sbjct: 1 MSKKILGKLGAIIISLTMVISLVACGKNTASNEGKSKVDKIKESGKLVIGTCADYPPYEF 60 Query: 50 ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + + GFD+ + ++ + ++ + ALQS +D++ + Sbjct: 61 HKTINGKDEIVGFDITIAKEIAKDLGVK---LEIKDMKFDGLLAALQSGNVDMVIAGMNP 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F + Y Q ++ + S+ G I VQ GTT E Sbjct: 118 TEDRKK--SVDFSKVYYQAIQSVVVRAEDKDKFKSIEDFKGKKIGVQKGTTQEEVAKREM 175 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 +V ++ + + D + + Sbjct: 176 ----TNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYASNGKD 217 >gi|157691140|ref|YP_001485602.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus SAFR-032] gi|157679898|gb|ABV61042.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Bacillus pumilus SAFR-032] Length = 264 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 74/236 (31%), Gaps = 14/236 (5%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + V + ++ + N + K LK G FA NG GF Sbjct: 1 MKNKKWLVILFAAMLAVLAACGGNNQS--EGKDEKVLKVGATGQSYPFAYKD-NGKLVGF 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ A++ + + + L S ++D +S T R+ F Sbjct: 58 DVEVTEAIAKKLGYK---LDWQLSEFSGLMGQLTSGKLDTVSNQVAVTDERK--QTFNFT 112 Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G I+ K I + L G ++ G+ L + + +E Sbjct: 113 DTYAYAGTQIIVKKDNNDIKGLDDLKGKTVAAVLGSNHAKNLESKDPDKKI--NIKTYET 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + R DAY S L A P I+ + I + + Sbjct: 171 QDGVLNEVANGRVDAYVNGRSVLLAQIEKTGLP--LKIVGNPIVYEEVGYPFAKDK 224 >gi|326560580|gb|EGE10961.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis 103P14B1] gi|326576282|gb|EGE26197.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis CO72] Length = 265 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 30/242 (12%), Positives = 71/242 (29%), Gaps = 17/242 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKR-------GFLKCGINTGLVGFAEVKAN 53 M + + + S ++ L + F+ + Sbjct: 1 MTTVLKFTTAAFCVSLLAACSNESTTNTKTAAAPNSSTSQKELIIATESSFKPFSYLDKQ 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF++D AL + D Q + + +L + + D + T R Sbjct: 61 GQLVGFEIDLANALCKQMQTD---CQIVSQDWDSLIPSLNANKSDAIMAGMSITEER--L 115 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + + I K +++ ++G ++ Q T + L ++ N Sbjct: 116 NAVDFSEPYFDNTLVLIGKKDNTA-TINDIAGKAVATQQATVSAEYLQKHYPDAN----I 170 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +++ + A R + D+ T + I + A+ + Sbjct: 171 KTYDKQDNAYLDLTAGRVEFMLSDVVPATDWLATEAGSEFEIKGMPIDIGDKVGIAVRKD 230 Query: 234 DT 235 + Sbjct: 231 SS 232 >gi|221199372|ref|ZP_03572416.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia multivorans CGD2M] gi|221205726|ref|ZP_03578741.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia multivorans CGD2] gi|221174564|gb|EEE06996.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia multivorans CGD2] gi|221180657|gb|EEE13060.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia multivorans CGD2M] Length = 373 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 80/221 (36%), Gaps = 13/221 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I ++ + Sbjct: 135 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRIGVK---CVWVAQDLDGIIP 191 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149 AL++K+ DI+ + T R + F Y I + +V+ L G + Sbjct: 192 ALKAKKYDIIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKAGSPLQPTVASLKGKRVG 249 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E Y++ + ++ +++ A + R DA D L Sbjct: 250 VEQGSTQETYAKTYWEPQG--VTIVPYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 307 Query: 210 RPSEHVIL-PDIISKSPLA----PAIIQGDTEWYNIVSWTH 245 R P++ + + + + DT+ ++ Sbjct: 308 RGKGFAFAGPEVKDRKTIGDGTAIGLRKEDTDLKIRINKAL 348 >gi|146311034|ref|YP_001176108.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter sp. 638] gi|145317910|gb|ABP60057.1| L-arginine-binding protein [Enterobacter sp. 638] Length = 243 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 73/218 (33%), Gaps = 16/218 (7%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G++ F + A+ GFD+D +AL + D + AL+ Sbjct: 22 KISFGVSATYPPFESLDASNQIVGFDIDLAKALCKQMQAD---CTFTNHAFDSLIPALKF 78 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K+ D + D T + S ++F Y + I K S ++L G I ++ GT Sbjct: 79 KKYDAVISGMDITP--DRSKQVSFTDPYYANSAVVIAKK-DTYKSFAELKGKRIGMENGT 135 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T + L D + ++ + + R D GD + + T P Sbjct: 136 THQKYLQDQHPE----VKTVAYDSYQNAIIDLKNGRIDGVFGDTAVVNEWLKT--NPQLG 189 Query: 215 VILPDIISKSP----LAPAIIQGDTEWYNIVSWTHYAM 248 + L A+ + ++ A+ Sbjct: 190 KATEKVTDAQYFGTGLGIAVRPDNKALLEKLNGALKAI 227 >gi|16262713|ref|NP_435506.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium meliloti 1021] gi|14523339|gb|AAK64918.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium meliloti 1021] Length = 272 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 83/259 (32%), Gaps = 33/259 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + ++ NA L+ G+ F ++G +G+D Sbjct: 4 MKNWQTSLTGLITAVLLSAAPANADT---------LRVGMECTYAPFNYRTSDGKLEGYD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + +S I D +Y+ AL + + D++ + T R+ + F Sbjct: 55 VDVAKGISEIIGVD---FEYVCQEWDGMIPALLANKFDLIIASMSITDKRKE--QIDFSS 109 Query: 121 ITYFDGQGFIMHKKKGISSVSQ--------LSGASICVQAGTTTELTLADYFKAHNMKYH 172 + K + G I V+ +T ++F A K Sbjct: 110 PYRNSVGRIVGPVGKDLKLFDDKGQPVVGNFDGLRIGVERASTYF----EWFSAKLPKAD 165 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------L 226 ++++ E + + R D + + L+ + ++ + P + Sbjct: 166 LVLYDSNEAMYLDLKNGRVDVIMTNPMKAHLSFLSGEGKGKYEFIG-PEVNEPKFFGPGV 224 Query: 227 APAIIQGDTEWYNIVSWTH 245 + +G+ E + +S Sbjct: 225 GVGLRKGNDELRDKISAAI 243 >gi|325684796|gb|EGD26948.1| L-cystine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 270 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 37/258 (14%), Positives = 77/258 (29%), Gaps = 26/258 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-----------GDIKKRGFLKCGINTGLVGFAE 49 M K + L + + S ++ +G L G+ ++ Sbjct: 1 MKKSIKKILSFLAVAGIGASLAACSSSSSSSSSSSSYQSELTSKGTLTIGLEGTYAPYSY 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 +G GF+VD +A++ + +++P L S + D++ N T Sbjct: 61 R-KSGKLTGFEVDLGKAVAKKLGLKA---KFVPTKWDSLIAGLGSSKYDVVLNNITQTPE 116 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ F + I K ++ +SQ+ G GT + Sbjct: 117 RKKV--YNFSDPYIYSRYALITKKSSKVTKLSQIQGKKWAEGTGTNNAALV------KKY 168 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LA 227 K + + R R D A YA ++ + + P ++ Sbjct: 169 KGTIVPSGDFSTSLSLVRQGRVDGTINAAEAWYAY-AKDNNTKDLKMTDLSKQVDPVKVS 227 Query: 228 PAIIQGDTEWYNIVSWTH 245 + +T+ + Sbjct: 228 ALFNKKNTKLLAKFNKAL 245 >gi|294635976|ref|ZP_06714418.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Edwardsiella tarda ATCC 23685] gi|291090705|gb|EFE23266.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Edwardsiella tarda ATCC 23685] Length = 257 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 80/246 (32%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L L +L ++ + + + I+ G +K G + A+G GFD Sbjct: 1 MMKTTARALLALTLLSGSALAQSGNERAAIQAAGSIKFGTEGTYPPYTYHDASGKLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RA+++ + P I+ L +K+ D + T R+ AF Sbjct: 61 VDIARAVAAKMGVKPEFIEGR---WDGLIAGLSAKRYDAVINQVGITPERQA--KFAFSD 115 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ I S + L Q+ T+ LA + A + + Sbjct: 116 PYITSKAVLIVRDNNAQIKSFADLRDQK-AAQSLTSNYAKLAQKYGA-----ELVPTDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R A D + + ++ + A + + + Sbjct: 170 NQSLELVISGRAAATLNDNLSYLDFRQHKPNAP-LKVVAVAEQGADSAILVRKDQPQLVQ 228 Query: 240 IVSWTH 245 ++ Sbjct: 229 ALNQAL 234 >gi|168179725|ref|ZP_02614389.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum NCTC 2916] gi|182669265|gb|EDT81241.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum NCTC 2916] Length = 272 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 73/226 (32%), Gaps = 25/226 (11%) Query: 1 MYKDFFVSILCLIILFF-----------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49 M K + +II T+ + S + IK+ G L G + Sbjct: 1 MSKKILGKLGAIIISLTMVISLVACGKNTAGNEEESKVDKIKESGKLVVGTCADYPPYEF 60 Query: 50 ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + + GFD+ + ++ + ++ + ALQS +DI+ + Sbjct: 61 HKTINGKDEIVGFDITIAKEIAKDLGVK---LEIKDMKFDGLLAALQSGNVDIVIAGMNP 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F I Y Q ++ + S+ + G I VQ GTT E + Sbjct: 118 TEDRKK--SVDFSKIYYQAIQSVVVRAEDKDKFKSLEEFKGKKIGVQKGTTQE----EVA 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 K +V ++ + + D + + Sbjct: 172 KKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGKN 217 >gi|28378733|ref|NP_785625.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum WCFS1] gi|254556936|ref|YP_003063353.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum JDM1] gi|308180925|ref|YP_003925053.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|28271570|emb|CAD64475.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum WCFS1] gi|254045863|gb|ACT62656.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum JDM1] gi|308046416|gb|ADN98959.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 507 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 92/262 (35%), Gaps = 30/262 (11%) Query: 1 MYKDF--FVSILCLIILFFTS------FSTNASILGDIKKRGFLKCGINTGLVGFAE--- 49 M K F F++I+ +I+ + L I+K+G L G + + Sbjct: 17 MKKRFGWFLAIIVALIMTVVPLGQTQHAQAADNSLEQIQKKGVLVMGTSPDYPPYEFQAT 76 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V G DV + ++ + ++ ++ +ALQ+ ++D++ + T Sbjct: 77 VNGKSKIVGMDVQIGKQVAKDLGVK---LKIKSMSFDSLLVALQTGKVDMIISGMNPTPS 133 Query: 110 REISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R + F + Y G +++K + + ++ Q GTT + + Sbjct: 134 RRK--NVDFTHVYYQGGYDIVINKTDKGKYKNKNSFKNGTLGAQTGTTQYNAV-----KN 186 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR----PSEHVILPDIISK 223 ++ A ++H+ D + + A N PS+ + S Sbjct: 187 QTTAKAKGMTSQSDLILALQSHKVDGVAMEKPSAEAYVANNKSLVAIPSDFNMSSSATSS 246 Query: 224 SPLAPAIIQGDTEWYNIVSWTH 245 + A +G T N V+ T Sbjct: 247 A---IAFRKGSTSLVNKVNKTV 265 >gi|310778141|ref|YP_003966474.1| amino acid ABC transporter substrate-binding protein, PAAT family [Ilyobacter polytropus DSM 2926] gi|309747464|gb|ADO82126.1| amino acid ABC transporter substrate-binding protein, PAAT family [Ilyobacter polytropus DSM 2926] Length = 244 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 38/239 (15%), Positives = 86/239 (35%), Gaps = 20/239 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++ ++++ + +++ + G N F + +G GFD Sbjct: 1 MKKFLNILLILVMLVSLAACGG-----KKEEEKTVIHIGTNAEFPPFEYL-EDGKITGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ +I+ ++ ALQSK++D++ R+ + F Sbjct: 55 MDLIKEIAKE---SQLEIKIEDMSFDGLLPALQSKKVDVVIAGMTANEERKK--AVNFTS 109 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y Q ++ + I+S L G + V G T +L +++ + + Sbjct: 110 PYYTASQVIVVKEGDSSINSFDDLKGKKVGVMLGFTGDLVVSEI-----EGVNIERYNAA 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + ++ + DA D N+ I ++ A A+ + D E Sbjct: 165 YAGIMSLQSGKVDAVVLDSEPAKNYVEKNEG---LAIAKADAAEEEYAIAVRKEDKELL 220 >gi|119511878|ref|ZP_01630977.1| glutamine-binding protein of glutamine ABC transporter [Nodularia spumigena CCY9414] gi|119463446|gb|EAW44384.1| glutamine-binding protein of glutamine ABC transporter [Nodularia spumigena CCY9414] Length = 236 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 93/233 (39%), Gaps = 13/233 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +A+ + +I++RG+L + L +G+ +G ++D + L+ + +++ Sbjct: 2 ASAAQMPEIQRRGYLTIAVKDNLRPLGFRDVDGNLQGLEIDLAKRLALDLLGKADAVRFQ 61 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ ++R + + ++D+ T R ++F YFDG + +S +S Sbjct: 62 PVANRDRLSVVLNNKVDLAIARVTATESRARL--VSFSVPYYFDGTLIVTKDAC-VSQLS 118 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+ I V ++T + Y + + +E + + A+ D S L Sbjct: 119 DLANRKIAVIKNSSTIAQVRYYVPKA----ELVGVDSYQEGRSLTENNTVVAFAADASVL 174 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIVSWTHYAMVTAE 252 ++ +LP +S PL+ + + + V+ A TAE Sbjct: 175 SGWVQQYP---QYRLLPTKLSTEPLSVVMPKGLQYDQLRRQVNEAI-AKYTAE 223 >gi|53718673|ref|YP_107659.1| histidine-binding periplasmic protein precursor [Burkholderia pseudomallei K96243] gi|53725151|ref|YP_102514.1| amino acid ABC transporter periplasmic amino acid-binding protein [Burkholderia mallei ATCC 23344] gi|67639861|ref|ZP_00438691.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia mallei GB8 horse 4] gi|121601374|ref|YP_992328.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia mallei SAVP1] gi|126448544|ref|YP_001081123.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia mallei NCTC 10247] gi|126452224|ref|YP_001065375.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei 1106a] gi|166999938|ref|ZP_02265767.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia mallei PRL-20] gi|167718616|ref|ZP_02401852.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei DM98] gi|167814779|ref|ZP_02446459.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei 91] gi|167851715|ref|ZP_02477223.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei B7210] gi|167900312|ref|ZP_02487713.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei 7894] gi|167908464|ref|ZP_02495669.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei NCTC 13177] gi|242315039|ref|ZP_04814055.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei 1106b] gi|52209087|emb|CAH35028.1| histidine-binding periplasmic protein precursor [Burkholderia pseudomallei K96243] gi|52428574|gb|AAU49167.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei ATCC 23344] gi|121230184|gb|ABM52702.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia mallei SAVP1] gi|126225866|gb|ABN89406.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei 1106a] gi|126241414|gb|ABO04507.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia mallei NCTC 10247] gi|238520469|gb|EEP83929.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia mallei GB8 horse 4] gi|242138278|gb|EES24680.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei 1106b] gi|243064056|gb|EES46242.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia mallei PRL-20] Length = 258 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I +K + P + Sbjct: 20 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NAKCTWTPQDLDGIIP 76 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149 AL++K+ D++ + T R + F Y I + SV L G + Sbjct: 77 ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVG 134 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E +++ + ++ +++ A + R DA D L Sbjct: 135 VEQGSTQETFAKAHWEPKG--VTIVSYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 192 Query: 210 RPSEHVILPDIISKSP------LAPAIIQGDTEWYNIVSWTH 245 R K P A + + D + + ++ Sbjct: 193 RGKGFAWAG-PAVKDPRTLGDGTAMGLRKEDADLKDAINRAL 233 >gi|330949981|gb|EGH50241.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae Cit 7] Length = 260 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 87/252 (34%), Gaps = 19/252 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + + K+ L+ G++ F A+G GFD Sbjct: 1 MKKAWLTLSALAL------CIAAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +++ + L++++ D + + T RE + F Sbjct: 53 IDLGNAICKEL---KVTCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IDFSN 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K G++ + L G ++ + GT E + + Sbjct: 108 ELFSGPTSLVFKKGAGLTADPASLKGKTVGYEQGTIQEAYAKAVLDKAGVSTK--AYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTE 236 +++ A + R DA D+ L + +++ + + + A I +G+ E Sbjct: 166 DQVYADLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPVDSELLPAKTAIGIAKGNKE 225 Query: 237 WYNIVSWTHYAM 248 ++ AM Sbjct: 226 LKALLDKGIKAM 237 >gi|161521540|ref|YP_001584967.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia multivorans ATCC 17616] gi|189352290|ref|YP_001947917.1| polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221197222|ref|ZP_03570269.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD2M] gi|221203894|ref|ZP_03576912.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD2] gi|221210913|ref|ZP_03583893.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD1] gi|160345590|gb|ABX18675.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia multivorans ATCC 17616] gi|189336312|dbj|BAG45381.1| polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221169869|gb|EEE02336.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD1] gi|221176060|gb|EEE08489.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD2] gi|221183776|gb|EEE16176.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD2M] Length = 257 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 72/219 (32%), Gaps = 19/219 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L I + + K ++ G++ F A+G GFD Sbjct: 1 MKKLVLSVALACIAVGAHA-----------KDWSTIRFGVDASYPPFESKDASGKVVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + + +K ++ + AL++K+ D + + T R + F Sbjct: 50 VDLGNEICARL---KAKCVWVENDFDGMIPALKAKKFDGVLSSMSMTPARAEQIA--FSD 104 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K G+ S L G S+ V+ GT E Y+ + ++ Sbjct: 105 KLFNTPTRLVAKKGAGLQPSAESLKGKSVGVEQGTIQETYAKAYWAPKG--VQVVPYQNQ 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 + + + R DA D L R + Sbjct: 163 DGVYQDLMSGRLDAALQDAVQADLGFLKTPRGANFAFAG 201 >gi|315635185|ref|ZP_07890463.1| L-cystine ABC superfamily ATP binding cassette transporter, binding protein YckK [Aggregatibacter segnis ATCC 33393] gi|315476147|gb|EFU66901.1| L-cystine ABC superfamily ATP binding cassette transporter, binding protein YckK [Aggregatibacter segnis ATCC 33393] Length = 259 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 81/262 (30%), Gaps = 21/262 (8%) Query: 1 MYKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K F ++L L L + I ++K L G F +G G Sbjct: 1 MKKSIFANVLLLSGLALGVATQTIAGEISDRVEKTKTLLVGTEGTYAPFTFHDDSGKLTG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ A++ + IQ+ + L +K+ D+++ T E + Sbjct: 61 FDVEVIEAVAQRLG---LTIQFNETQWDSMYAGLNAKRFDLIANQT--NPSPERLKKYLY 115 Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + + + I + L G Q+ T+ +A A IV + Sbjct: 116 TAPYNYSTAVIVTKEDDNSIKTFEDLKGKK-AAQSLTSNYGKIAKANGA-----ELIVVD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R + D A+ + + K P A+++G+ Sbjct: 170 GLAQALKLITQDRAETTVNDHLAVLDYFKKQPNAGLKIAVK-RDEKVPSGFAVLKGEEPL 228 Query: 238 YNIVSWTHYAMVTAEELGITQK 259 ++ EEL Sbjct: 229 IEKINQAL------EELRKDGT 244 >gi|300768251|ref|ZP_07078156.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494315|gb|EFK29478.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 491 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 92/262 (35%), Gaps = 30/262 (11%) Query: 1 MYKDF--FVSILCLIILFFTS------FSTNASILGDIKKRGFLKCGINTGLVGFAE--- 49 M K F F++I+ +I+ + L I+K+G L G + + Sbjct: 1 MKKRFGWFLAIIVALIMTVVPLGQTQHAQAADNSLEQIQKKGVLVMGTSPDYPPYEFQAT 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V G DV + ++ + ++ ++ +ALQ+ ++D++ + T Sbjct: 61 VNGKSKIVGMDVQIGKQVAKDLGVK---LKIKSMSFDSLLVALQTGKVDMIISGMNPTPS 117 Query: 110 REISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R + F + Y G +++K + + ++ Q GTT + + Sbjct: 118 RRK--NVDFTHVYYQGGYDIVINKTDKGKYKNKNSFKNGTLGAQTGTTQYNAV-----KN 170 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR----PSEHVILPDIISK 223 ++ A ++H+ D + + A N PS+ + S Sbjct: 171 QTTAKAKGMTSQSDLILALQSHKVDGVAMEKPSAEAYVANNKSLVAIPSDFNMSSSATSS 230 Query: 224 SPLAPAIIQGDTEWYNIVSWTH 245 + A +G T N V+ T Sbjct: 231 A---IAFRKGSTSLVNKVNKTV 249 >gi|255092798|ref|ZP_05322276.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile CIP 107932] Length = 254 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 82/245 (33%), Gaps = 10/245 (4%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGF-LKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + L + S N K+ + G + V + GD GFDVD + Sbjct: 1 MLGLLGGVVGCSKPDNEKDKDASKESKKEVVVGFDNTFVPMGFLDEKGDTVGFDVDLAKE 60 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQ-IDILSRNTDWTLLREISLGLAFRPITYFD 125 + ++++ P++ + L + +D+L T R+ +++ + Sbjct: 61 TFKRLG---MEVKFQPIDWSMKETELNDSKTVDVLWNGYSITDERKKI--VSYTEPYLQN 115 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA--DYFKAHNMKYHPIVFERVEEID 183 Q + I+S + L + Q G+T + F P++++ ++ Sbjct: 116 KQIIVTLSDSKINSKADLKDKEVGTQQGSTALDAVEKDKDFMNSLKGGAPVLYDTYDKAL 175 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 R A GD + + ++ +L D A + + E ++ Sbjct: 176 RDLEIGRTSAVVGDEVLIR-YYMGQKGEDKYKVLKDDFGLEDYVVATSKENPELCEKINK 234 Query: 244 THYAM 248 T M Sbjct: 235 TLKEM 239 >gi|283770942|ref|ZP_06343834.1| polar amino acid ABC transporter inner membrane subunit [Staphylococcus aureus subsp. aureus H19] gi|283461089|gb|EFC08179.1| polar amino acid ABC transporter inner membrane subunit [Staphylococcus aureus subsp. aureus H19] Length = 485 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 92/283 (32%), Gaps = 25/283 (8%) Query: 3 KDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51 K IL L +L T+ + IK+RG L+ G++ V Sbjct: 2 KCLIRFILVLGLLISSAMVYINPTAHAEQDQAWEKIKERGELRVGLSADYAPMEFEHTVN 61 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++ G D+D + ++ + K++ + ++ AL++ +IDI+ T R+ Sbjct: 62 GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118 Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + F ++ K + + + Q GT E + Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228 R+ ++ A ++ + + + A N + +V + + +A Sbjct: 173 NASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISNVKFKEEEKDTVIA- 231 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + + + ++ T + + N D + Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273 >gi|271963751|ref|YP_003337947.1| glutamine ABC transporter glutamine-binding protein [Streptosporangium roseum DSM 43021] gi|270506926|gb|ACZ85204.1| glutamine ABC transporter (glutamine-binding protein) [Streptosporangium roseum DSM 43021] Length = 269 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 75/215 (34%), Gaps = 5/215 (2%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 GI G + + +G +KGFDVD + ++ + K+++ + R Sbjct: 26 DSDKFVVGIKFDQPGLGQKQPDGSFKGFDVDVAKYVAKELGYTGDKVEFKEAISANRESF 85 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICV 150 +Q Q++I+ T R+ +G F GQ + I+SV L +C Sbjct: 86 IQQGQVNIVIATYSITDDRKKKIG--FAGPYLVTGQDILTRADDTTINSVDDLKDKKVCG 143 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 G+++ L D F + + + DA + D + L + Sbjct: 144 AQGSSSPKRLVDKFGDAWKGQYLTEQQGYGACLPLLENKQVDAISTDATILAGFATQS-- 201 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 P + ++ S+ + D + ++ Sbjct: 202 PGKFRLVGKPFSEEKYGIGVKLDDKDTREKLNAAV 236 >gi|209546609|ref|YP_002278527.1| family 3 extracellular solute-binding protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537853|gb|ACI57787.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 257 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 85/254 (33%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGF 59 M + L ++ + A ++ G+ N F A+G+W G+ Sbjct: 1 MK--LLPMLFAGAALALSAVTAQA----------EVRFGVMNESYPPFFAKDASGEWHGW 48 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D A+ + + K + ++ ALQSK+ D++ + T R + F Sbjct: 49 EIDLMNAVCTEM---KEKCSIVDISWDGLIPALQSKKFDVIWSSMSNTAERSKV--IDFT 103 Query: 120 PITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y I K + ++ + G +I +Q T YF ++ Sbjct: 104 DKYYNTPSTLIGPKDQKPGATAEDVKGKTIGIQVSTIQSEYYKKYFANA---AEEKTYQT 160 Query: 179 VEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 ++E + R D GD AL LK + + K L + G + Sbjct: 161 LDEAFQDLASGRIDYVFGDSLALDAFLKSDGGKDCCAKMGDVADDKEILGAGVSGGLRKE 220 Query: 238 YNIVSWTHYAMVTA 251 + A + A Sbjct: 221 DTELKAKLNAAIAA 234 >gi|299066293|emb|CBJ37477.1| putative cystine transporter subunit; periplasmic-binding component of ABC superfamily (fliY) [Ralstonia solanacearum CMR15] Length = 267 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 75/233 (32%), Gaps = 14/233 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 +A L +I+K G ++ I F + A+ +G+D+D L+ + Sbjct: 23 LLPGRPAHADALANIQKAGVIRVAIPNDFPPFGSLGADLKLQGYDIDMANLLAKELGVKA 82 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 + + + R L + ++D++ + R + F + K Sbjct: 83 ELVP---VTSTNRIPFLTTGKVDVVISSLGKNAERAKV--IDFTQAYAPFPKSVYGPKDV 137 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I + + L+G +I V G+T +L L A +E +Y + T Sbjct: 138 SIKTPADLAGKTIGVTRGSTEDLALTAVAPA---SATIKRYEDNNATAQSYLIGQVQLVT 194 Query: 196 GDISALYA--LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 A + + + D P + +G+ V+ Sbjct: 195 LGNIVANAVNERTRLRQLDVKFPVEDT----PCYVGVAKGEPALLEKVNAAIT 243 >gi|325128657|gb|EGC51525.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria meningitidis N1568] Length = 268 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 79/224 (35%), Gaps = 10/224 (4%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 + N F + + G+ +GFDVD A++ A KI++ F AL Sbjct: 37 KVYRVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKA---GNFKIEFKHQPWDSLFSALN 93 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQA 152 + D++ T + + F + Q ++ K K ISS L + V Sbjct: 94 NGDADVVMSGVTITD--DRKQSMDFSDPYFEITQVVLVPKGKKISSSEDLKKMSKVGVVT 151 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-RP 211 G T + +++ N FE V I D+ D + + N + Sbjct: 152 GYTGDFSVSKLLG--NDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKG 209 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + V LPD + A+ +GD +++ + + E Sbjct: 210 MDFVTLPD-FTTEHYGIAVRKGDEATVKMLNDALKKVRESGEYD 252 >gi|315929488|gb|EFV08683.1| Amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 [Campylobacter jejuni subsp. jejuni 305] Length = 168 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 5/167 (2%) Query: 2 YKDFFVSILCL--IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K + + F++ + L IK +G L G+ + +A + A G+ KG Sbjct: 4 RKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD + L+ +I D KI+ + +NAK R L + +D + T R+ F Sbjct: 64 FEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRI--YNF 121 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 Y D G ++ K+K S++ + GA+I V TT+ + + K Sbjct: 122 SEPYYQDAIGLLVLKEKKYKSLADMKGANIGVAQAATTKKAIGEAAK 168 >gi|241913538|pdb|3HV1|A Chain A, Crystal Structure Of A Polar Amino Acid Abc Uptake Transporter Substrate Binding Protein From Streptococcus Thermophilus gi|241913539|pdb|3HV1|B Chain B, Crystal Structure Of A Polar Amino Acid Abc Uptake Transporter Substrate Binding Protein From Streptococcus Thermophilus Length = 268 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 36/227 (15%), Positives = 74/227 (32%), Gaps = 8/227 (3%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 F+T K +K G + V + +G + GFD+D A+ D ++ Sbjct: 7 FATQKDQWQTYTKEKKIKIGFDATFVPXGYEEKDGSYIGFDIDLANAVFKLYGID---VE 63 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + ++ + L++ ID++ T R+ F + Q + K GI S Sbjct: 64 WQAIDWDXKETELKNGTIDLIWNGYSVTDERK--QSADFTEPYXVNEQVLVTKKSSGIDS 121 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNM---KYHPIVFERVEEIDAAYRAHRCDAYTG 196 V+ +G ++ QAG++ K + + + + R D Sbjct: 122 VAGXAGKTLGAQAGSSGYDAFNASPKILKDVVANQKVVQYSTFTQALIDLNSGRIDGLLI 181 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 D + ++ + P A + D ++ Sbjct: 182 DRVYANYYLEKSGVLDQYNVXPAGYEGESFAVGARKVDKTLIKKINQ 228 >gi|219872121|ref|YP_002476496.1| amino acid ABC transporter substrate-binding [Haemophilus parasuis SH0165] gi|219692325|gb|ACL33548.1| amino acid ABC transporter, substrate-binding protein [Haemophilus parasuis SH0165] Length = 260 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 69/212 (32%), Gaps = 12/212 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M+K + L L +F ++ + S+L I +G + G F A+G G+ Sbjct: 1 MFKKLSIVALSLAAVFTSTAALAKESLLDRINNKGTITVGTEGTYAPFTYHDASGKLTGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ RA++ + + + L+ ++ DI++ T E Sbjct: 61 DVEVTRAVAEKLGVK---VDFKETQWDAMLAGLKGERFDIVANQVGLT-TPERQATFDKS 116 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G + +S + G Q ++ LA A + + Sbjct: 117 AEYSWSGAMLLARNDETRVSKAEDVKGLK-AAQTLSSNYGELAQKNGA-----ELVAVDG 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + R D D AL N Sbjct: 171 MAQALLLLQQKRADVTFNDSLALLDYLKKNPN 202 >gi|167580215|ref|ZP_02373089.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis TXDOH] gi|167618324|ref|ZP_02386955.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis Bt4] Length = 258 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + I +K + P + Sbjct: 20 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLANEVCKRI---NAKCTWTPQDLDGIIP 76 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149 AL++K+ D++ + T R + F Y I + SV L G + Sbjct: 77 ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLLPSVESLKGKRVG 134 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E +++ + ++ +++ A + R DA D L Sbjct: 135 VEQGSTQETFAKAHWEPKG--VTIVSYQNQDQVYADLGSGRLDATLQDEFQADYGFLRTP 192 Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245 R K P A + + D + N ++ Sbjct: 193 RGKGFAWAG-PAVKDPKTLGDGTAMGLRKDDADLKNAINRAL 233 >gi|115360206|ref|YP_777344.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia ambifaria AMMD] gi|115285494|gb|ABI91010.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 257 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 38/255 (14%), Positives = 82/255 (32%), Gaps = 24/255 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + + + S ++ G++ F A+G GFD Sbjct: 1 MKK--LALSIALACIAVGAHAKDWST---------IRFGVDASYPPFESKDASGKVVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + + +K ++ + AL++K+ D + + T R + F Sbjct: 50 VDLGNEICARL---KAKCVWIENDFDGMIPALKAKKFDGVLSSMSMTPARAEQIA--FSD 104 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K + + L G S+ V+ GT E Y+ + ++ Sbjct: 105 KLFNTPTRLVSKKGAHLQPTAESLKGKSVGVEQGTIQETYAKAYWAPKG--VQIVSYQNQ 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 + + + R DA D L R + I + + + D Sbjct: 163 DGVYQDLMSGRLDAALQDAVQADLGFLKTPRGANFEFAGKDIDDPKTLGNGAGIGLRKDD 222 Query: 235 TEWYNIVSWTHYAMV 249 + + ++ Sbjct: 223 ADLKAKIDHAIADII 237 >gi|253583645|ref|ZP_04860843.1| amino acid-binding protein [Fusobacterium varium ATCC 27725] gi|251834217|gb|EES62780.1| amino acid-binding protein [Fusobacterium varium ATCC 27725] Length = 244 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 92/249 (36%), Gaps = 23/249 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L L+ + + K+ L G N F + NG GFD Sbjct: 1 MKKLFCAVMLLLMGIVGSVSFA--------KENKTLYVGTNAEFQPFEYL-ENGKIVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ ++ I D I++ + ALQ+K++D++ T R+ + F Sbjct: 52 VELMEEIAKLIGKD---IEWKNIAFDGLLPALQAKKLDVIIAGMTATEERKKF--VNFSQ 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y Q +++K+ + L+G S+ V G T ++ ++ + Sbjct: 107 TYYTSNQMILINKENPVVESFDKLAGYSVGVILGYTGDIAVSAI-----EGVKVQRYNGA 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A +A + DA D S ++ E ++ ++K A A+ + + + Sbjct: 162 AEAIMALKAKKVDAVVLD-SEPAKNYAKQNK--ELGLINTDVAKEEYAIAVGKDNKALAD 218 Query: 240 IVSWTHYAM 248 + + Sbjct: 219 EIDKALKVL 227 >gi|170690739|ref|ZP_02881905.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170143988|gb|EDT12150.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 250 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 85/260 (32%), Gaps = 29/260 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ + LF ++ + L G +T + F + + + GFD Sbjct: 1 MVRRVFLMSVVAAALFGSALARA--------DTKELVVGTDTSFMPFEFKQGD-KYVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + + P++ ALQ++ ID+ R + F Sbjct: 52 LDLWAEIAKDLGWKY---KVQPMDFSGLIPALQTQNIDVALSGMTIKEERRK--AIDFSD 106 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I S+ L+G I + GT T D+ KAH F + Sbjct: 107 PYYDSGLAAMVQSGNTSIRSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNI 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ A A R DA D + T + + +S +G Sbjct: 163 DQAYLALEAGRVDAAMHDTPNVLYFASTAGKGKV-KVAGTPVSGDKYGIGFPKGSP---- 217 Query: 240 IVSWTHYAMVTAEELGITQK 259 A V AE + Sbjct: 218 -----LVASVNAELAKMKAD 232 >gi|170761710|ref|YP_001786801.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A3 str. Loch Maree] gi|169408699|gb|ACA57110.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A3 str. Loch Maree] Length = 268 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 77/257 (29%), Gaps = 20/257 (7%) Query: 1 MYKD-----FFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEV 50 M K F+ + + N+S IK +G L G+ F Sbjct: 1 MSKKKILSVLFIVVCTISFTLVGCGQKNSSDGKDSSYSKIKDKGQLVVGLCAQYPPFESR 60 Query: 51 KAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 G+ +GFDVD + L + K++ + + D+L Sbjct: 61 NDKTGEIEGFDVDLAKELGKEM---DLKVEIKDAEWEALLGGVNKGDYDVLITCMSKKEA 117 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 E ++ + D + I + L G + VQ T++E + + Sbjct: 118 AEANINTSDTY-YKLDDIIVVNKNNNSIHNKDDLKGKVVGVQTSTSSEQVV----DKLDG 172 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + R E + +R DA A A + + + I+ + S + Sbjct: 173 INEIKRYNRNPEALIDLKNNRIDAVVVG-YAYAATAMKDKKDDNLKIINSPVGSSDIVMV 231 Query: 230 IIQGDTEWYNIVSWTHY 246 +G ++ Sbjct: 232 TKKGSDNLTKELNKALK 248 >gi|254249735|ref|ZP_04943055.1| Lysine-arginine-ornithine-binding periplasmic protein [Burkholderia cenocepacia PC184] gi|124876236|gb|EAY66226.1| Lysine-arginine-ornithine-binding periplasmic protein [Burkholderia cenocepacia PC184] Length = 260 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 88/255 (34%), Gaps = 23/255 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ + + +L ++ S A K ++ G++ F A+G GFD Sbjct: 1 MKK--ILAAVTVALLAVSAGSAYA------KDWSTVRFGVDASYPPFESKGADGKVVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + I +K ++ + AL++++ D + + T R + F Sbjct: 53 VDLGNEICRRI---NAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPARAEQIA--FSS 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K G+ + L G S+ V+ GT E ++ + + + ++ Sbjct: 108 KLFNTPTRLVTKKGAGLQPTAESLKGKSVGVEQGTIQETYAKAHWASKG--VNIVPYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL------APAIIQG 233 +++ A + R D D L R + P + + Sbjct: 166 DQVYADLISGRLDGALQDAVQAEIGFLKTPRGANFDFAGK-DLDDPKTLGNGAGIGLRKE 224 Query: 234 DTEWYNIVSWTHYAM 248 DT+ + M Sbjct: 225 DTDLKAKIDGAIAGM 239 >gi|148653872|ref|YP_001280965.1| extracellular solute-binding protein [Psychrobacter sp. PRwf-1] gi|148572956|gb|ABQ95015.1| extracellular solute-binding protein, family 3 [Psychrobacter sp. PRwf-1] Length = 280 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 34/266 (12%), Positives = 72/266 (27%), Gaps = 18/266 (6%) Query: 2 YKDFFVSILCLIILFFTSF-----STNASI--LGDIKKRG-FLKCGINTGLVGFAEVKAN 53 + V + L L + +A G ++ + + A+ Sbjct: 8 KSKWAVLSMALSGLMLAACNNSQAPADAETGAAEAADSAGQTIRIATESSYKPLSYTDAD 67 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF++D AL + +K LQ+K+ D + T R Sbjct: 68 GKLIGFEIDLIHALCDEM---KAKCDISSQEWDGLIPGLQAKKFDAIIAGMSITPER--L 122 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F +G + K + +S S + Q T + Sbjct: 123 EKVDFTDPYLNNGLILVAKKGENVSVKDDFSNIPVGAQRATIAAQYIEASHPEAK----V 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +++ E + R A D + + + + S + A+ +G Sbjct: 179 SLYDTQENAYLDLTSGRIRALFSDKVTAAYWLTSEEGKAFEQKGEEFNSDDAMGIAVRKG 238 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQK 259 + A+ + + Sbjct: 239 -DALAGKFNQALAAIKESGKYDEISA 263 >gi|330970981|gb|EGH71047.1| extracellular solute-binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 260 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 93/276 (33%), Gaps = 29/276 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + + K+ L+ G++ F A+G GFD Sbjct: 1 MKKAWLTLSALAL------CIAAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + K +++ + L++++ D + + T RE + F Sbjct: 53 IDLGNAICKEL---KVKCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IDFSN 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K G + + L G ++ + GT E + + Sbjct: 108 ELFSGPTSLVFKKGAGFTADPASLKGKTVGYEQGTIQEAYAKAVLDKAGISTK--AYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +++ + + R DA D+ L + +++ + I D+E Sbjct: 166 DQVYSDLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPI-------------DSELLP 212 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 + A E + K I + KD T ++Q+ Sbjct: 213 AKTAIGIAQGNKELKALLDKGIEAMHKDGTYAEIQK 248 >gi|315504693|ref|YP_004083580.1| extracellular solute-binding protein family 3 [Micromonospora sp. L5] gi|315411312|gb|ADU09429.1| extracellular solute-binding protein family 3 [Micromonospora sp. L5] Length = 301 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 32/237 (13%), Positives = 69/237 (29%), Gaps = 14/237 (5%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKI 78 + A + IK G + G ++ + +G GFDV+ A+++ + Sbjct: 48 AALAAKVPDAIKSDGKIVVGTDSTYAPAEFLDTDGKTVIGFDVELFTAVAAKLGLKAE-- 105 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ + + S + + + R+ + + G ++ K Sbjct: 106 -FVSAPFGDIINGVNSGKYEAGVSSFTINDDRKGQANM---VSYFQVGTQWVTKKGNPAG 161 Query: 139 SVSQL-SGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 G I VQ T + A F + AA + + DA Sbjct: 162 VALDNACGKKIAVQKDTVQVEDIQKRSKACTDAGKPAITIDQFPGQDAATAAVVSGKDDA 221 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 D ++ +L +P + + T+ V A++ Sbjct: 222 MLADYPVGVYAVTQSND--ALELLDKQYEAAPYGYVLAKEQTQLAEAVRDATKAVIA 276 >gi|171740989|ref|ZP_02916796.1| hypothetical protein BIFDEN_00051 [Bifidobacterium dentium ATCC 27678] gi|171276603|gb|EDT44264.1| hypothetical protein BIFDEN_00051 [Bifidobacterium dentium ATCC 27678] Length = 270 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 80/251 (31%), Gaps = 20/251 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K V+I + I+ F + ++ L IK+ G + G F+ A+ Sbjct: 9 KKFVTVTIAAISIIGFGACGSSNNSSSVGELDQIKENGEIVFGTEGTYAPFSYHDADDKL 68 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G+DV+ A++ + +++ N + +K+ D ++ E Sbjct: 69 TGYDVEVATAVAKELGVKA---KFVEANWDSLLAGVDAKKFDTVADQVA--PSDERKQKY 123 Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + + + K I + + + G + + T + + + Sbjct: 124 DFTDLYTYSQGVAVTKKGNDDIKTFADIKGKNAAETKTSNWNQTAQE------NGANIVS 177 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA-IIQGD 234 + A + R A L L +P V + SP A I +G+ Sbjct: 178 VNDFAQAVDAITSGR--AEVTLNDKLAVLDYLKQKPDAEVQISAKSEVSPAAAFPIRKGE 235 Query: 235 TEWYNIVSWTH 245 + V+ Sbjct: 236 DDLVKAVNDAL 246 >gi|290957467|ref|YP_003488649.1| extracellular binding protein [Streptomyces scabiei 87.22] gi|260646993|emb|CBG70092.1| putative extracellular binding protein [Streptomyces scabiei 87.22] Length = 321 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 79/258 (30%), Gaps = 20/258 (7%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 + + ++ +G + G + A+G G D+D A+ + Sbjct: 46 SASTSGAPLAGKLPASVRDKGVINVGSDIAYAPVEFKDASGKVVGLDLDIAAAMGKQLGV 105 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL----------GLAFRPITY 123 D ++ L +K+ DI T R+ + G+ F + Sbjct: 106 D---FKFQNATFDTLIGGLAAKRYDIAMSAMTDTKDRQEGIDSDTGKKVGAGVDFVD-YF 161 Query: 124 FDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY----HPIVFE 177 G +K +GI + L G +I VQ T + D K F Sbjct: 162 TAGVSLYTNKGDDQGIKTWDDLCGKTIAVQRNTFSHDLAKDQAKKCKDDKKGALKIEDFA 221 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R+ D + D T+ I+ D + P A+ + TE Sbjct: 222 TNPEAETRMRSKGADVVSADFPVAAYSVKTSGGGKYFEIVGDQVEAGPYGIALAKDSTEL 281 Query: 238 YNIVSWTHYAMVTAEELG 255 + + A++ E Sbjct: 282 RDALKAAVQAIIDNGEYE 299 >gi|254504719|ref|ZP_05116870.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia alexandrii DFL-11] gi|222440790|gb|EEE47469.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia alexandrii DFL-11] Length = 262 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 47/242 (19%), Positives = 96/242 (39%), Gaps = 10/242 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + + ++ L DI G +K F + A+G+++G+D Sbjct: 1 MLKRFAGLAGAAMAAVMLLAAPASAELKDILAAGKIKIATPENFPPFGALGADGEYEGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + + ++ +P+ +K+R L++ ++D++ R + F Sbjct: 61 IDVAKMIAEDLGVE---LELVPVTSKQRIPFLETDRVDLVIATLGANPERAK--SIWFSH 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G +SS++ +G I V GT +L + + I F Sbjct: 116 AYAPFFSGAFAKPDVAVSSIADFAGKKIAVTGGTLEDLAITEDAP---DGAEIIRFGDNA 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 AAY + + D + AL ++ND P ++ II+ SP + G+ + Sbjct: 173 ATIAAYVSGQADVIVTGN--MVALGISNDNPEFNLEPKFIIANSPSFIGVKTGNMDLLQW 230 Query: 241 VS 242 V+ Sbjct: 231 VN 232 >gi|16331484|ref|NP_442212.1| hypothetical protein sll0064 [Synechocystis sp. PCC 6803] gi|1001140|dbj|BAA10282.1| sll0064 [Synechocystis sp. PCC 6803] Length = 275 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 96/267 (35%), Gaps = 17/267 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++++ L + ++L + + G L+ G T V F ANG+ +G+ VD Sbjct: 9 WLALTFTTGLVAIAPVQAETVLERVARTGELRAGTRTDAVPFGFEMANGEMEGYGVDLMA 68 Query: 66 ALS---SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 ++ + + ++ + RF A+ S ++DI+ T T + + F Sbjct: 69 LIALKLAEEMGKTITVDLDRVDLQSRFEAIASGELDIVCEATTITQ--DRLELVDFSAPF 126 Query: 123 YFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + G F+M + + L G I TTT + + + + E Sbjct: 127 FISGAKFLMKQGSVEGFNINGTLEGIPIAYIQNTTTFDIIPKIYPLAQW----VPVQDRE 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILP-DIISKSPLAPAIIQGDTEWY 238 E A + A D L L P+E+ + P I+ A + QGD +W Sbjct: 183 EGIAKLDGGQVKAVVSDGILLVGELLKQGKNPAEYALGPYQPITTELYACILPQGDGDWK 242 Query: 239 NIVSWTH----YAMVTAEELGITQKNI 261 V + E I Q N+ Sbjct: 243 RFVDEVISSTENHDLLQEWFNIDQTNV 269 >gi|325526717|gb|EGD04237.1| periplasmic solute-binding protein [Burkholderia sp. TJI49] Length = 260 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 75/252 (29%), Gaps = 23/252 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +L L L + + S + ++ G++ F A+G G D Sbjct: 1 MNIKRLGMLLTLCALSTAASAQATSDI--------VRIGVDPNFPPFEFKSADGRLTGLD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ I +++ + L +K+ DI+ T R + F Sbjct: 53 IDLGNAICQDIGVK---CEWVEHDFDHIIPGLNAKKFDIILSAMIATEDRRKVM--DFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I G+ L G + V GT E + K I + Sbjct: 108 TLYHIPVAMIAATTSGLMPTGDSLRGKRLGVTKGTALEAYVK---GKWGSKAEVIAYPTD 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233 ++ A + + DA D + LT +A I + Sbjct: 165 AQLYDALASGKIDAAIQDKAQAEYFFLTKPAGQNFAFTGPDDFDDARLKNDDVAIGIRKD 224 Query: 234 DTEWYNIVSWTH 245 D + + ++ Sbjct: 225 DAQLKDRINKAI 236 >gi|116686709|ref|YP_839956.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|116652424|gb|ABK13063.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 268 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 85/245 (34%), Gaps = 12/245 (4%) Query: 2 YKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + + ++ +I F + +A L I K G L+ + F V + +G+D Sbjct: 10 RRTWLAALFAAPVIALFAAAPAHADALDTIAKNGTLRVAVPEDYPPFGSVGTDMQPQGYD 69 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ ++ ++ +P+N+ R L + ++D++ + T RE + F Sbjct: 70 IDMAGLLAKSLGVK---LKLVPVNSANRIPYLTTNKVDMVISSLGKTPEREKV--IDFSS 124 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 QG +S+ + L+G ++ G E+ L+ FE Sbjct: 125 AYAPYFQGVFGPSDVKVSTPADLTGKTVGATRGALEEIALSQLAP----NATIKRFEDNN 180 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A+ + + A+ P + +I SP + + + Sbjct: 181 ATIQAFLSGQVQLIAAGNIVAAAILA--KNPPRRPEVKFVIKNSPCFVGVNKNEPRLLAK 238 Query: 241 VSWTH 245 + Sbjct: 239 IDDAI 243 >gi|71737078|ref|YP_273645.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557631|gb|AAZ36842.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320325647|gb|EFW81709.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. B076] gi|320327070|gb|EFW83084.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 260 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 87/252 (34%), Gaps = 19/252 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L + + K+ L+ G++ F A+G GFD Sbjct: 1 MKKAWLTLSAVALCL------AAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +++ + L++++ D + + T RE + F Sbjct: 53 IDLGNAICKEL---KVTCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IDFSN 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K G ++ L G ++ + GT E + + Sbjct: 108 ELFSGPTSLVFKKGAGFTADKASLKGKTVGYEQGTIQEAYAKAALDKAGVSTK--AYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTE 236 +++ A + R DA D+ L + +++ + + + A I +G+ E Sbjct: 166 DQVYADLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPIDSELLPAKTAIGIAKGNKE 225 Query: 237 WYNIVSWTHYAM 248 ++ AM Sbjct: 226 LKALLDKGIKAM 237 >gi|304389301|ref|ZP_07371266.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304327419|gb|EFL94652.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 310 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 33/254 (12%), Positives = 71/254 (27%), Gaps = 17/254 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASIL-----GDIKKR--GFLKCGINTGLVGFAEVKAN- 53 K V+ + AS ++ K G + + Sbjct: 39 KKIVSVAAGLALAFSLAGCGGAASNNAGNAGDNVAKSAGDKFVVGFDANFPPYGYKDEKT 98 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G++ GFD+D ++ + ++ P++ + + L S +D L + Sbjct: 99 GEYTGFDMDLATEVAKR---NHWTLEKKPIDWDSKDMQLSSGSVDCLWNGFTMNGREDK- 154 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH--NMKY 171 + + F+ + + L+G ++ VQA ++ L D Sbjct: 155 --YTWSKPYVDNSIVFVTRSADNLKDAADLAGKTVIVQADSSGLAALEDESNKELLASFK 212 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + A DA D+ T + + I+ + Sbjct: 213 TLNKVPDYNNAFMSLEAGAADAVVVDLGVANYQLETRQKGM-YTIMEKPVQTEQYGIGFK 271 Query: 232 QGDTEWYNIVSWTH 245 G+ + V T Sbjct: 272 LGNKALRDQVQTTL 285 >gi|296139504|ref|YP_003646747.1| extracellular solute-binding protein family 3 [Tsukamurella paurometabola DSM 20162] gi|296027638|gb|ADG78408.1| extracellular solute-binding protein family 3 [Tsukamurella paurometabola DSM 20162] Length = 323 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 93/306 (30%), Gaps = 41/306 (13%) Query: 6 FVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 V+++ I S L I + G + G G + GFD Sbjct: 9 LVAVVIAAIAMVGGLVACGSTGPRDLLKSI-ESGSVILGTKYDQPGLGLRNPDKSMSGFD 67 Query: 61 VD----FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 VD ++++ A K ++ + +R + + ++D+++ R S + Sbjct: 68 VDVSSYVVKSIAQANGWKEPKTRWRETPSAQRETLINNGEVDMIAATYSINANR--SKKV 125 Query: 117 AFRPITYFDGQGFIMHKKKG-ISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F QG ++ K I+ ++ L G +C AG+T+ + KA Sbjct: 126 DFAGPYLVVRQGLLVRKDDTSITQLTDLNQGKKLCSAAGSTSAQNV----KAQLPGVQLQ 181 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR---------------PSEHVILPD 219 F+ A DA T D S L Sbjct: 182 EFDSYSTCTEALHQKSIDALTTDESILAGFNQQYGGEFRVVDMTYIADQCIKGSQKKAGS 241 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279 S + +G + ++ AM+ + K+ + + QR I Sbjct: 242 PFSTERYGIGLAKGQKKTQEAINAAVSAMIADGSWE------KALRKNLGDEETQRL--I 293 Query: 280 DKSSNI 285 D++ Sbjct: 294 DRAGGF 299 >gi|304413344|ref|ZP_07394817.1| periplasmic component/domain of ABC-type amino acid transport/signal transduction systems [Candidatus Regiella insecticola LSR1] gi|304284187|gb|EFL92580.1| periplasmic component/domain of ABC-type amino acid transport/signal transduction systems [Candidatus Regiella insecticola LSR1] Length = 246 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 87/257 (33%), Gaps = 26/257 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V IL + + S ++ L +T V F + + ++ GFD Sbjct: 1 MK--LLVKILLAGLTLAFAVSAYC-------EQKKLIVATDTAFVPFEFKEGD-NYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + D Q P++ ALQ+K +D+ T R+ + F Sbjct: 51 IDLWQAIAEQLHVDY---QLKPMDFSGIIPALQTKNVDVALAGITITDDRKKV--IDFSD 105 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I L G + V+ GT + DY K + + F + Sbjct: 106 GYYDSGLLIMVKNNNNDIKGEQDLQGKVVAVKMGTGSV----DYAKTNIKTKNLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + T + I A ++G +E Sbjct: 162 DNAYLELATGRADAVLHDAPNILYFIKTAGNDR-FKAVGAPIKAQQYGIAFLKG-SELRE 219 Query: 240 IVSWTHYAM----VTAE 252 V+ + + AE Sbjct: 220 KVNQALQVLYEKGIYAE 236 >gi|257460119|ref|ZP_05625223.1| L-cystine-binding protein TcyA [Campylobacter gracilis RM3268] gi|257442560|gb|EEV17699.1| L-cystine-binding protein TcyA [Campylobacter gracilis RM3268] Length = 249 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 71/246 (28%), Gaps = 19/246 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + C +++ N+ L + G LK F+ + G+D Sbjct: 1 MKNLIKTLLACALLI----CGANSKTLRE----GVLKVATEGTFSPFSYYNDKNELVGYD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RA++ + KI++L A + + D + T R+ + P Sbjct: 53 VDVARAVAEKLG---LKIEFLTAPWDAMLAAFDAGKADAVFNQVSITDERKKKYEYS-VP 108 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 T G + I S L G A + A + + Sbjct: 109 YTVVYGAIIVHKDNNDIKSFEDLKGKKNADSATSNWAQV------AKKYGAQNVTVDSFA 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A R D D + Y I + A + +G+ E + Sbjct: 163 KSMELLIARRVDTVVRDNTVFYDFLKQRPDAP-IKIAAKLKDVDYSAAIVQKGNKELADQ 221 Query: 241 VSWTHY 246 ++ Sbjct: 222 INKALN 227 >gi|331091629|ref|ZP_08340463.1| hypothetical protein HMPREF9477_01106 [Lachnospiraceae bacterium 2_1_46FAA] gi|330403386|gb|EGG82945.1| hypothetical protein HMPREF9477_01106 [Lachnospiraceae bacterium 2_1_46FAA] Length = 253 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 36/264 (13%), Positives = 94/264 (35%), Gaps = 21/264 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ ++ L T+ + L G G + +K + G D Sbjct: 3 MKKIISLALAGVVALSITACG------EKKSESDTLIVGTEAGFAPYEYMKGK-EVVGID 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + + ++ + ++ S ++D ++ R+ ++ F Sbjct: 56 MDIAKAIADDMGKE---LKIKNMEFDGALASVASGKVDFVAAGVSINEKRKKTM--DFSH 110 Query: 121 ITYFDGQGFI----MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + + G S L+G + VQ G + ++ + + + Sbjct: 111 EYVDSTEVIVVNGENPAISGKVSGESLNGKVVAVQQGNIADSWVS--NEENCKPKEVKRY 168 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + ++ D D A KL ++ E IL ++ + A A+ +G+ E Sbjct: 169 TKFAQASEDLKNNKVDCIVMDK--YPAEKLISEN-KELKILDGVLFEDKYAIAVKKGNKE 225 Query: 237 WYNIVSWTHYAMVTAEELGITQKN 260 + ++ ++ ++ N Sbjct: 226 LLDKINKVIDKLIADGKIEEFTAN 249 >gi|326561453|gb|EGE11803.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis 46P47B1] gi|326562224|gb|EGE12552.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis 7169] gi|326567178|gb|EGE17300.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis BC1] gi|326568460|gb|EGE18540.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis BC7] gi|326573961|gb|EGE23911.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis O35E] gi|326574952|gb|EGE24882.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis 101P30B1] Length = 265 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 30/242 (12%), Positives = 71/242 (29%), Gaps = 17/242 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKR-------GFLKCGINTGLVGFAEVKAN 53 M + + + S ++ L + F+ + Sbjct: 1 MTTVLKFTTAAFCVSLLAACSNESTTNTKTAAAPNSSTSQKELIIATESSFKPFSYLDKQ 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF++D AL + D Q + + +L + + D + T R Sbjct: 61 GQLVGFEIDLANALCKQMQAD---CQIVSQDWDSLIPSLNANKSDAIMAGMSITEER--L 115 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + + I K +++ ++G ++ Q T + L ++ N Sbjct: 116 NAVDFSEPYFDNTLVLIGKKDNTA-TINDIAGKAVATQQATVSAEYLQKHYPDAN----I 170 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +++ + A R + D+ T + I + A+ + Sbjct: 171 KTYDKQDNAYLDLTAGRVEFMLSDVVPATDWLATEAGSEFEIKGMPIDIGDKVGIAVRKD 230 Query: 234 DT 235 + Sbjct: 231 SS 232 >gi|262370798|ref|ZP_06064122.1| lysine-arginine-ornithine-histidine-binding periplasmic protein [Acinetobacter johnsonii SH046] gi|262314160|gb|EEY95203.1| lysine-arginine-ornithine-histidine-binding periplasmic protein [Acinetobacter johnsonii SH046] Length = 261 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 85/259 (32%), Gaps = 24/259 (9%) Query: 1 MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K +S + + ++ K+ ++ G + F + Sbjct: 1 MKNWQKKLLLSTTFVAVALSSTVQA--------KEWKTIRFGTESAYAPFEYKTPDNKLV 52 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D A+ + + +K ++ + AL++K+ D + + T R + Sbjct: 53 GFDIDLGNAICAKL---KAKCVWVENSFDGMIPALKAKKFDGILSSMTVTTDRAKQIA-- 107 Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y + K + + + L G + VQ GT E Y+ + + + Sbjct: 108 FSNKIYNTPTRMVAKKGSPLLPTPASLKGKRVGVQQGTIQEGYAKAYWAPKG--VNVVPY 165 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAII 231 + + + R DA D + A L + + + + + A + Sbjct: 166 PNQDVLYQDMVSGRLDATLQDAIMVDAGFLKSAKGKGFAFAGNNVVDAKTLGVGAAIGLR 225 Query: 232 QGDTEWYNIVSWTHYAMVT 250 + D + + ++ Sbjct: 226 KEDADLKKNIDKALAEIIA 244 >gi|91781330|ref|YP_556537.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91693990|gb|ABE37187.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 282 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 85/243 (34%), Gaps = 11/243 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + + +A L DIK RG + GI+ + AN + GFD A++ + I Sbjct: 23 TVAASADTLDDIKSRGTMTVGIDPTFAPYEYTDANNNIVGFDPAILAAVAKHLGVK---I 79 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL--AFRPITYFDGQGFIMHKKKG 136 +Y L L + DI + T R L K Sbjct: 80 EYQRLAFSGIIPGLLAHSFDIEGSALNVTAERAKRLAYVVPTSKTVNGALVRADFKKIPA 139 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCD 192 +++ L+G + V++ + E L + + K I + V++ AA R D Sbjct: 140 KATIESLAGLTAAVKSASAPEQILKQFNETLKAKGLAPITLISVDSVDQTVAALLTRRAD 199 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 DI+ L + PS+ ++ +A A DT +S AM + Sbjct: 200 FVFDDITVLAGVIKQ--NPSKLKSTGELGPSQWIALATRPDDTRLNKAISDEIIAMKKSG 257 Query: 253 ELG 255 EL Sbjct: 258 ELA 260 >gi|78063225|ref|YP_373133.1| lysine/arginine/ornithine ABC transporter periplasmic-binding protein [Burkholderia sp. 383] gi|77971110|gb|ABB12489.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 257 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 38/255 (14%), Positives = 82/255 (32%), Gaps = 24/255 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + + + S ++ G++ F A+G GFD Sbjct: 1 MKK--LALSIALACIAVGAHAKDWST---------IRFGVDASYPPFESKDASGKVVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + + +K ++ + AL++K+ D + + T R + F Sbjct: 50 VDLGNEICARL---KAKCVWIENDFDGMIPALKAKKFDGVLSSMSMTPARAEQIA--FSD 104 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K + + L G S+ V+ GT E Y+ + ++ Sbjct: 105 KLFNTPTRLVTKKGANLQPTAESLKGKSVGVEQGTIQETYAKAYWAPKG--VQVVPYQNQ 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 + + + R DA D L R + I + + + D Sbjct: 163 DGVYQDLMSGRLDAALQDAVQADIGFLKTPRGANFEFAGKDIDDPKTLGNGAGIGLRKDD 222 Query: 235 TEWYNIVSWTHYAMV 249 + + ++ Sbjct: 223 ADLKAKIDHAIADII 237 >gi|240081469|ref|ZP_04726012.1| Histidine-binding protein precursor [Neisseria gonorrhoeae FA19] gi|268597570|ref|ZP_06131737.1| histidine-binding protein [Neisseria gonorrhoeae FA19] gi|268551358|gb|EEZ46377.1| histidine-binding protein [Neisseria gonorrhoeae FA19] Length = 268 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 88/258 (34%), Gaps = 11/258 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWKGF 59 M K ++ C + G + + N F + + G+ +GF Sbjct: 3 MKKWIAAALACSALALSACGGQGKDAAAPAANPGKVYRVASNAEFAPFESLDSKGNVEGF 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A++ A KI++ F AL + DI+ T + + F Sbjct: 63 DVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGDADIVMSGVTITD--DRKQSMDFS 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q ++ K K +SS L + V G T + +++ + N FE Sbjct: 118 DPYFEITQVVLVPKGKKVSSSDDLKKMNKVGVVTGYTGDFSVSKLLGSDN--PKIARFES 175 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEW 237 V I D+ D + + N + + V LPD + A+ +GD Sbjct: 176 VPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDFVTLPD-FTTEHYGIAVRKGDEAT 234 Query: 238 YNIVSWTHYAMVTAEELG 255 +++ + + E Sbjct: 235 VKMLNDALEKVRESGEYD 252 >gi|254178357|ref|ZP_04885012.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia mallei ATCC 10399] gi|254199422|ref|ZP_04905788.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia mallei FMH] gi|254205737|ref|ZP_04912089.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia mallei JHU] gi|147749018|gb|EDK56092.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia mallei FMH] gi|147753180|gb|EDK60245.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia mallei JHU] gi|160699396|gb|EDP89366.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia mallei ATCC 10399] Length = 324 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I +K + P + Sbjct: 86 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NAKCTWTPQDLDGIIP 142 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149 AL++K+ D++ + T R + F Y I + SV L G + Sbjct: 143 ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVG 200 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E +++ + ++ +++ A + R DA D L Sbjct: 201 VEQGSTQETFAKAHWEPKG--VTIVSYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 258 Query: 210 RPSEHVILPDIISKSP------LAPAIIQGDTEWYNIVSWTH 245 R K P A + + D + + ++ Sbjct: 259 RGKGFAWAG-PAVKDPRTLGDGTAMGLRKEDADLKDAINRAL 299 >gi|134298595|ref|YP_001112091.1| extracellular solute-binding protein [Desulfotomaculum reducens MI-1] gi|134051295|gb|ABO49266.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfotomaculum reducens MI-1] Length = 264 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 72/232 (31%), Gaps = 15/232 (6%) Query: 19 SFSTNASILGDIKK--RGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDP 75 + K + L + F G + GFDV+ +AL + Sbjct: 23 GCDGSEPTKEQAKDAAKPKLIAAADATFAPFEFTDPKTGKYVGFDVELIQALCDEAGYE- 81 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKK 134 +++ + ALQ+ QID T R+ + F Y G + K Sbjct: 82 --LEFRSMGFDGLIAALQANQIDAAVSAMTITDERKK--EVDFSDPYYKSGLVVAVQAKD 137 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I L G I VQ+GTT L F ++ + DA Sbjct: 138 TEIKGFEDLKGKKIAVQSGTTGALQAEKITDK----DKITYFTNADQALLELKNGAVDAV 193 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 D ++ E ++ +I+S A+ +G TE ++ Sbjct: 194 VNDFPVSAYFIQQGNK--EVKMVGEILSAEEYGIAVPKGKTETVEKLNAALK 243 >gi|70728647|ref|YP_258396.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] gi|68342946|gb|AAY90552.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens Pf-5] Length = 260 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 88/233 (37%), Gaps = 13/233 (5%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 S L K+ L+ G++ F A+G GFD+D A+ + + K + Sbjct: 14 CMAAGSALA--KEYKELRFGVDPSYAPFESKAADGSLVGFDIDLGNAICAEL---KVKCK 68 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-S 138 ++ + L++ + D + + T RE + F + F+ K G+ Sbjct: 69 WVESDFDGMIPGLKANKFDGVISSMTVTPAREKV--IDFSNELFSGPTAFVFKKGSGLSE 126 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L G ++ + GT E +K ++ +++ A + R DA D+ Sbjct: 127 DTASLKGKTVGYEQGTIQEAYAKAVLDKAGVKTQ--AYQNQDQVYADLTSGRLDASIQDM 184 Query: 199 SALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 L + + +++ + D + + A I +G+ E ++ A+ Sbjct: 185 LQAELGFLKSPQGADYEISKPVDDPLLPAKTAVGISKGNKELKALLDKGIKAL 237 >gi|69248091|ref|ZP_00604620.1| extracellular solute-binding protein, family 3 [Enterococcus faecium DO] gi|258616182|ref|ZP_05713952.1| extracellular solute-binding protein [Enterococcus faecium DO] gi|293559678|ref|ZP_06676206.1| ABC-type amino acid transport system, periplasmic component [Enterococcus faecium E1162] gi|293569922|ref|ZP_06681009.1| ABC-type amino acid transport system, periplasmic component [Enterococcus faecium E1071] gi|294620772|ref|ZP_06699978.1| ABC-type amino acid transport system, periplasmic component [Enterococcus faecium U0317] gi|68194565|gb|EAN09057.1| extracellular solute-binding protein, family 3 [Enterococcus faecium DO] gi|291587670|gb|EFF19547.1| ABC-type amino acid transport system, periplasmic component [Enterococcus faecium E1071] gi|291599629|gb|EFF30640.1| ABC-type amino acid transport system, periplasmic component [Enterococcus faecium U0317] gi|291606353|gb|EFF35759.1| ABC-type amino acid transport system, periplasmic component [Enterococcus faecium E1162] Length = 278 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 77/255 (30%), Gaps = 12/255 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K +++ ++ T A + +++K+ L + L + + Sbjct: 1 MKKKRLFALITSAFFILSACGTAAANQEDNSWSNVEKKKELVVATSGTLFPASYYNDQNE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+DVD + ++ + KI + N + ++ ++ D + + T RE Sbjct: 61 LVGYDVDLAKEVAKRL---NVKISFKEYNVDGQITSVSKRESDFAANDFGITKEREKKFS 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 L+ FD GI S+ L G + T+ + H K Sbjct: 118 LSETFKYSFDSMIVRKKDDSGIHSLEDLKGKKAAGEPNTSYMRL----AEKHGAKLVTYD 173 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + R D D ++ +++ + +G+ Sbjct: 174 NATNDQYLSDVANGRTDVILNDYYLQKMAVSALPDIPVKILENVYFNENESGFLLKEGND 233 Query: 236 EWYNIVSWTHYAMVT 250 + M Sbjct: 234 ALKKKIDGVLKEMKE 248 >gi|291537852|emb|CBL10963.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Roseburia intestinalis XB6B4] Length = 271 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 82/235 (34%), Gaps = 10/235 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + +I + + ++ L G + + + +G G DV+ Sbjct: 6 KKYIAAIGICFMALGAACIMKTDPEEVGEELPELIIG-SDNYEPYNYLDDDGKPVGIDVE 64 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A+ + P + + ++ L + ++D L + + + Sbjct: 65 LAEAVCEQLGYTP---VFQYIVWDKKDEYLDNGKVDCLWGSFTMNGREDEYQ---WAGPY 118 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI-VFERVEE 181 + Q + I ++S L+G + VQA T E L + + + ++E Sbjct: 119 LYSRQVIAVRTDSKIRNISDLAGKRVAVQATTKPEEVLLERSDPRVPEVDMVYSLSGMDE 178 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 I A+ R DA TG SAL + + P + IL + + S L A + Sbjct: 179 IYASLRKGYVDAITGHESAL--ERFVGNAPDMYAILDESLYISELGVAFKNDTHQ 231 >gi|240128915|ref|ZP_04741576.1| Histidine-binding protein precursor [Neisseria gonorrhoeae SK-93-1035] gi|268687302|ref|ZP_06154164.1| amino acid ABC transporter [Neisseria gonorrhoeae SK-93-1035] gi|268627586|gb|EEZ59986.1| amino acid ABC transporter [Neisseria gonorrhoeae SK-93-1035] Length = 268 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 88/258 (34%), Gaps = 11/258 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFL-KCGINTGLVGFAEVKANGDWKGF 59 M K ++ C + G + + N F + + G+ +GF Sbjct: 3 MKKWIAAALACSALALSACGGQGKDAAAPAANPGKVYRVASNAEFAPFESLDSKGNVEGF 62 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A++ A KI++ F AL + D++ T + + F Sbjct: 63 DVDLMNAMAKA---GNFKIEFKHQPWDSLFPALNNGDADVVMSGVTITD--DRKQSMDFS 117 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q ++ K K +SS L + V G T + +++ + N FE Sbjct: 118 DPYFEITQVVLVPKGKKVSSSDDLKKMNKVGVVTGYTGDFSVSKLLGSDN--PKIARFES 175 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEW 237 V I D+ D + + N + + V LPD + A+ +GD Sbjct: 176 VPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDFVTLPD-FTTEHYGIAVRKGDEAT 234 Query: 238 YNIVSWTHYAMVTAEELG 255 +++ + + E Sbjct: 235 VKMLNDALEKVRESGEYD 252 >gi|134103708|ref|YP_001109369.1| putative ABC transporter substrate-binding protein [Saccharopolyspora erythraea NRRL 2338] gi|291004757|ref|ZP_06562730.1| putative ABC transporter substrate-binding protein [Saccharopolyspora erythraea NRRL 2338] gi|133916331|emb|CAM06444.1| putative ABC transporter substrate-binding protein [Saccharopolyspora erythraea NRRL 2338] Length = 259 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 81/256 (31%), Gaps = 14/256 (5%) Query: 5 FFVSILCLIILFFTSFSTNASILG-----DIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 ++ + L + T + + G L + F G GF Sbjct: 1 MLPALALVFGLAGCAQPTTGGGGTAAGGVQLIESGHLTTCTHMDYKPFQFHD-QGKIVGF 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD ++ + + P + L +++ D+ + T +RE F Sbjct: 60 DVDLVDLIARDLGVQQKIVD-TPFEGIQSGEDLNTRRCDVAAAAMSITDVRE--QNFDFS 116 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q + K G++S+ L G + VQ TT E + AH + FE + Sbjct: 117 DPYFEATQALLTKKGTGLNSLEALRGKKLGVQLSTTGETYANENKAAHGY--EVVQFEDL 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A + + DA D S L E I + + + G+ N Sbjct: 175 PLSVTAVQTGQIDAAINDNSVLGDFI---KNNPEVEITTEFTTGDQYGIGVATGNEALRN 231 Query: 240 IVSWTHYAMVTAEELG 255 V+ + M E Sbjct: 232 AVNQSLKKMKENGEYD 247 >gi|170756143|ref|YP_001781581.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum B1 str. Okra] gi|169121355|gb|ACA45191.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum B1 str. Okra] Length = 272 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 73/226 (32%), Gaps = 25/226 (11%) Query: 1 MYKDFFVSILCLIILFF-----------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49 M K + +II T+ + S + IK+ G L G + Sbjct: 1 MSKKILGKLGAIIISLTMVISLVACGKNTAGNEEKSKVDKIKESGKLVVGTCADYPPYEF 60 Query: 50 ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + + GFD+ + ++ + ++ + ALQS +DI+ + Sbjct: 61 HKTINGKDEIVGFDITIAKEIAKDLGVK---LEIKDMKFDGLLAALQSGNVDIVIAGMNP 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F I Y Q ++ + S+ + G I VQ GTT E + Sbjct: 118 TEDRKK--SVDFSKIYYQAIQSVVVRAEDKDKFKSLDEFKGKKIGVQKGTTQE----EVA 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 K +V ++ + + D + + Sbjct: 172 KKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGKN 217 >gi|157362890|ref|YP_001469657.1| extracellular solute-binding protein [Thermotoga lettingae TMO] gi|157313494|gb|ABV32593.1| extracellular solute-binding protein family 3 [Thermotoga lettingae TMO] Length = 263 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 85/221 (38%), Gaps = 12/221 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A+ L +I KRG + + V +G GF ++ + + +I++ Sbjct: 22 AATTLEEIVKRGKIIIATDMTSVPMQYRDPSGKPTGFTIELMELAAKYMG---VQIEWQD 78 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + +L +K++D+++ N TL R ++ F + G + K + Sbjct: 79 MAWESLIPSLLTKKVDMIAANMSMTLTRLKTIR--FSEPFFLTGIRVLARKDSKMVYWKD 136 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 + S+ + A T ++ + ++ P ++E + E + + R DA D Sbjct: 137 IIDPSVKIGA---TMGSVHADYVEKQLRKKPFLYENLAEWLSDLKTGRIDAVMDDEMLCI 193 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 L E IL + A Q D+E ++V+W Sbjct: 194 ELV---KNNPELKILEGYVRPDTYGLAFRQ-DSESDSLVNW 230 >gi|255066836|ref|ZP_05318691.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria sicca ATCC 29256] gi|255048911|gb|EET44375.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria sicca ATCC 29256] Length = 316 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 68/224 (30%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTN--------------ASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L S++ I +G + G Sbjct: 43 MLKKFVLGGMTALVLAACGGEGGSASSSAPAQSANASGSLIERINNKGTITVGTEGTYAP 102 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 103 FTYHDKDGKLTGYDVEVTRAVADKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 159 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + K I S+ + G V+ + + KA Sbjct: 160 T-SPERQATFDKSEPYSWSGAVLVARKDSNIKSIDDIKG----VKTAQSLTSNYGEKAKA 214 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 215 AG--AELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 256 >gi|226194539|ref|ZP_03790137.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei Pakistan 9] gi|225933624|gb|EEH29613.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei Pakistan 9] Length = 324 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I +K + P + Sbjct: 86 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NAKCTWTPQDLDGIIP 142 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149 AL++K+ D++ + T R + F Y I + SV L G + Sbjct: 143 ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVG 200 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E +++ + ++ +++ A + R DA D L Sbjct: 201 VEQGSTQETFAKAHWEPKG--VTIVPYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 258 Query: 210 RPSEHVILPDIISKSP------LAPAIIQGDTEWYNIVSWTH 245 R K P A + + D + + ++ Sbjct: 259 RGKGFAWAG-PAVKDPRTLGDGTAMGLRKEDADLKDAINRAL 299 >gi|116511362|ref|YP_808578.1| amino acid ABC transporter periplasmic protein [Lactococcus lactis subsp. cremoris SK11] gi|116107016|gb|ABJ72156.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactococcus lactis subsp. cremoris SK11] Length = 273 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 81/271 (29%), Gaps = 26/271 (9%) Query: 3 KDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAE---VKANGD 55 K + ++ L + + N + +KK G LK ++ F Sbjct: 6 KKMTLGLVGLAAVATLAACGNGKSATNQVDKVKKAGVLKVALSPDYPPFEFQIIKDGKNT 65 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G DVD A+ + ++ ++ +L + + DI RE Sbjct: 66 VVGSDVDLANAIGKKLGVK---VKIESMDFNNVLASLNTGKADIAISGISKEPSREK--S 120 Query: 116 LAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + Y ++ K SSV G + Q G+ E + FK Sbjct: 121 VNFSDVYYTASNYLVVKKSDLGKYSSVDDFKGKKVAAQKGSIQEGIVTSQFK----GTTE 176 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA--PAII 231 I ++ + + + + + N + K A+ Sbjct: 177 IALPQIGDEINEVKGGQVQGAVIENLIAKSYVAANSD-LAIANVEVKTPKDSYGSAVALP 235 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262 +G E +V+ EEL Q N + Sbjct: 236 KGSDELTKVVNSVIK-----EELKNGQINKD 261 >gi|261378818|ref|ZP_05983391.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria cinerea ATCC 14685] gi|269144797|gb|EEZ71215.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria cinerea ATCC 14685] Length = 274 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 66/224 (29%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFFTSFST--------------NASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L + S++ I +G + G Sbjct: 1 MLKKFILGGMTALVLAACGGEGGSASSSAPAQSAGESGSLIERINNKGTVTVGTEGTYAP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 61 FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + K I S+ + G + KA Sbjct: 118 T-SPERQATFDKSEPYSWSGAVLVARKDSNIKSIDDIKGVKTAQSLTSNYGE------KA 170 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 171 KAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214 >gi|148379979|ref|YP_001254520.1| amino acid ABC transporter substrate-binding protein [Clostridium botulinum A str. ATCC 3502] gi|153934075|ref|YP_001384278.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A str. ATCC 19397] gi|153938267|ref|YP_001391342.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum F str. Langeland] gi|148289463|emb|CAL83560.1| probable amino acid abc transporter,substrate-binding protein [Clostridium botulinum A str. ATCC 3502] gi|152930119|gb|ABS35619.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A str. ATCC 19397] gi|152934163|gb|ABS39661.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum F str. Langeland] gi|295319371|gb|ADF99748.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum F str. 230613] Length = 272 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 73/226 (32%), Gaps = 25/226 (11%) Query: 1 MYKDFFVSILCLIILFF-----------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49 M K + +II T+ + S + IK+ G L G + Sbjct: 1 MSKKILGKLGAIIISLTMVISLVACGKNTAGNEEKSKVDKIKESGKLVVGTCADYPPYEF 60 Query: 50 ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + + GFD+ + ++ + ++ + ALQS +DI+ + Sbjct: 61 HKTINGKDEIVGFDITIAKEIAKDLGVK---LEIKDMKFDGLLAALQSGNVDIVIAGMNP 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F I Y Q ++ + S+ + G I VQ GTT E + Sbjct: 118 TEDRKK--SVDFSKIYYQAIQSVVVRAEDKDKFKSLEEFKGKKIGVQKGTTQE----EVA 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 K +V ++ + + D + + Sbjct: 172 KKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGKN 217 >gi|260914458|ref|ZP_05920927.1| L-cystine ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] gi|260631559|gb|EEX49741.1| L-cystine ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] Length = 263 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 83/253 (32%), Gaps = 15/253 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 ++L ++F + NA + ++ L G F A+G GFD Sbjct: 7 KTKLTTALLAASLIFGVASQVNAGPISDRVESTKTLLVGTEGTYAPFTFHDASGKLTGFD 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ ++ + KIQ + L +K+ D+++ T E + Sbjct: 67 VEVIEEVAKRLG---LKIQLQETQWDAMYAGLNAKRFDVIANQT--NPSPERLKKYIYSE 121 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + +++ L G Q+ T+ +A A+ + E + Sbjct: 122 PYNYSNAVVVTRADDNSVATFEDLKGKKSG-QSLTSNYTKIAQKHGAN-----LVTVEGL 175 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R R D D A+ I + K P A ++G+ E + Sbjct: 176 AQALELIRQKRADTTVNDKLAVLDYFQKMPNAG-LKIAAENKDKVPSGFAFLKGEEELVS 234 Query: 240 IVSWTHYAMVTAE 252 V+ A + A+ Sbjct: 235 KVNQAL-AEIRAD 246 >gi|148379166|ref|YP_001253707.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A str. ATCC 3502] gi|153933499|ref|YP_001383542.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A str. ATCC 19397] gi|153937472|ref|YP_001387091.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A str. Hall] gi|148288650|emb|CAL82731.1| putative cystine ABC transporter,substrate-binding protein [Clostridium botulinum A str. ATCC 3502] gi|152929543|gb|ABS35043.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A str. ATCC 19397] gi|152933386|gb|ABS38885.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A str. Hall] Length = 274 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 78/253 (30%), Gaps = 10/253 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVK-ANGDWKGF 59 +K F+S+ L++ + + A +IK+ +K G + F + + +GF Sbjct: 6 FKKIFLSM-SLVVALGVALTACAQKNKEIKENKNTIKIGTSGQYYPFTFIDKDSNKVQGF 64 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D + P + + L + +ID ++ T + F Sbjct: 65 EIDIWEEIGKRTGYKPE---FKVADWTGIMGMLDTGKIDTVANEITVTD--KKKEKYYFS 119 Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFE 177 + G K I S+ L G S+ Q GT ++ D+ + + Sbjct: 120 KPYVYSGVQLATKKGNNNIKSLKDLEGKSVATQVGTNYSQSIEDHNNKNKGEDIKTKQYN 179 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + R DA D A + + P ++ + E Sbjct: 180 SFSGMFQDVDLGRVDALIEDKLACLVNIKKSGLNLQLAGEPIEEMENAYPFVKKDENKEK 239 Query: 238 YNIVSWTHYAMVT 250 ++ M Sbjct: 240 IEKINKALDDMKN 252 >gi|221067529|ref|ZP_03543634.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] gi|220712552|gb|EED67920.1| extracellular solute-binding protein family 3 [Comamonas testosteroni KF-1] Length = 300 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 90/230 (39%), Gaps = 9/230 (3%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRA 66 +++ + + +++ IK+ G L+ G F+ + +G +GFD+ + Sbjct: 36 ALVAQGPVADAATIASSTWASKIKQAGTLRLGSTQTSNLFSLLNEKDGKIRGFDLGLAQL 95 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ I D +K Q+ + + R L + Q+D++ T R ++F Y Sbjct: 96 ITRYILGDAAKYQFTQVTSSTREQVLINNQVDMVFATYSITPARAE--KISFAGPYYTSQ 153 Query: 127 QGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G ++ + S + L G + QAG+T LA Y F+ +E A Sbjct: 154 SGVLVKSNNKTLQSYNDLGGKKVATQAGSTGPAILAQYAPKA----VVQEFQTHQEALDA 209 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 R R DAY D + L L+ + + ++ P + +G Sbjct: 210 LRQGRVDAYVTDYTLLL-NALSLGTSNARLAGAPFGAQDPYGVGLPKGSD 258 >gi|295098053|emb|CBK87143.1| L-histidine-binding protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 260 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 90/245 (36%), Gaps = 20/245 (8%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ G + F A G+ GFD+D L I ++ Y+ +L++ Sbjct: 27 KIRIGTDPTYAPFESKNAKGELVGFDIDLANELCKRI---KAQCTYVENPLDALIPSLKA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153 K+ID++ + T R +AF Y ++ K I ++ L G + V G Sbjct: 84 KKIDVIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKSSDIQPTLESLKGKRVGVLQG 141 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT E +++ + + ++ E I A A R DA D A L + Sbjct: 142 TTQETYGNEHWAPKGI--EIVSYQGQENIYADLTAGRIDAAFQDEVAASEGFLKQPVGKD 199 Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + I L + + D E ++ +A + A+ ++++K Sbjct: 200 YKFGGPSIKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYDKLAKKY 252 Query: 269 TNPDV 273 + +V Sbjct: 253 FDFNV 257 >gi|320177860|gb|EFW52846.1| Glutamine ABC transporter, periplasmic glutamine-binding protein [Shigella boydii ATCC 9905] Length = 287 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 75/214 (35%), Gaps = 12/214 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 L +T V F + + + GFDVD A++ + D P++ ALQ Sbjct: 64 KKLVVETDTAFVPFEFKQGD-KYVGFDVDLWAAIAKELKLDYE---LKPMDFSGIIPALQ 119 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152 +K +D+ T R+ + F Y ++ + SV L G + V++ Sbjct: 120 TKNVDLALAGITITDERKK--AIDFSDGYYKSDLLVMVKANNNDVKSVKDLDGKVVAVKS 177 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT + DY KA+ F ++ +R DA D + T Sbjct: 178 GTGSV----DYAKANIKTKDLRQFPNIDNAYMELGTNRADAVLHDTPNILYFIKTAGNG- 232 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + D + A +G E + V+ Sbjct: 233 QFKAVGDSLEAQQYGIAFPKGSDELRDKVNGALK 266 >gi|126459761|ref|YP_001056039.1| extracellular solute-binding protein [Pyrobaculum calidifontis JCM 11548] gi|126249482|gb|ABO08573.1| extracellular solute-binding protein, family 3 [Pyrobaculum calidifontis JCM 11548] Length = 270 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 90/258 (34%), Gaps = 20/258 (7%) Query: 5 FFVSILCLIILFFTSFSTNAS------ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 + ++ + + + A+ + IKKRG L G + + V G G Sbjct: 13 LVIGVVLGALANWGAQQQQAAPPTCPTSVDAIKKRGKLILGTSADWPPYEYV-EGGQIVG 71 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 DV+ + +++A+ +++ + A++ ++D++ + T RE + F Sbjct: 72 IDVEIAKRIANALG---VQLEIRDIKFSGLIEAVKRGEVDLVLADMAITPEREA--QVLF 126 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 D I ++SV L G +I VQ GT E K + +++ Sbjct: 127 SIPYQVDSSVVITLGSGKVASVDDLRGKAIGVQIGTVQEDWA---VKTLGNSSKIVRYDK 183 Query: 179 -VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + A + DA AL + + S A A+ + Sbjct: 184 VYPYMVEALKKGDLDAIVVGGVVGRALVAKFPELRQAFSVGVRYS----AAAMPLCAHDL 239 Query: 238 YNIVSWTHYAMVTAEELG 255 +V Y M+ + E+ Sbjct: 240 KLVVDKVIYDMLQSGEME 257 >gi|190894721|ref|YP_001985014.1| putative amino acid ABC transporter substrate-binding protein [Rhizobium etli CIAT 652] gi|190700382|gb|ACE94464.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] gi|327193170|gb|EGE60079.1| putative amino acid ABC transporter, substrate-binding protein [Rhizobium etli CNPAF512] Length = 277 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 39/263 (14%), Positives = 80/263 (30%), Gaps = 23/263 (8%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + L I+ +T ++L + LK + + + + G Sbjct: 1 MNRLTKMTAAAASLAIVLAAVPATAGAVLDRVMAAKDLKVATDANWAPQSFMNDKNELDG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D + + + ++++ + + D+ + T R F Sbjct: 61 FDIDVAKDIGRRLGVK---VEFVTPGWDIITAGNWAGRWDMHVGSMTPTKKRAEI--FDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL-------ADYFKAHNMKY 171 + Y+ HK + +S G + A +T E A A ++ Sbjct: 116 PAVYYYTPAAVAAHKDSKATKLSDFDGKVVGTTATSTFEAYAKGDLTLDAAGAPAFKYEF 175 Query: 172 HPIVFERVE---EIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 P + R R DA + ++ + D + P Sbjct: 176 KPKEVKSYANSTTAFDDLRLGDGTRLDAVVSSLP---SILEAVKAGYPIKQIGDPVFYEP 232 Query: 226 LAPAIIQGDTEWYNIVSWTHYAM 248 LA AI GD + + ++ M Sbjct: 233 LAVAIEHGDKSFNDKIAEAVKGM 255 >gi|157831886|pdb|1LST|A Chain A, Three-Dimensional Structures Of The Periplasmic Lysine-, Arginine-, Ornithine-Binding Protein With And Without A Ligand Length = 239 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 85/245 (34%), Gaps = 20/245 (8%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ G +T F+ A G++ GFD+D + + K ++ + +L++ Sbjct: 5 TVRIGTDTTYAPFSSKDAKGEFIGFDIDLGNEMCKRM---QVKCTWVASDFDALIPSLKA 61 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153 K+ID + + T R +AF Y I K I ++ L G + V G Sbjct: 62 KKIDAIISSLSITDKR--QQEIAFSDKLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQG 119 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T E D ++ + + + + I + A R DA D A L E Sbjct: 120 STQEAYANDNWRTKGVD--VVAYANQDLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKE 177 Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + + + + DTE EL ++++K Sbjct: 178 YAFAGPSVKDKKYFGDGTGVGLRKDDTELKAAFDKALT------ELRQDGT-YDKMAKKY 230 Query: 269 TNPDV 273 + +V Sbjct: 231 FDFNV 235 >gi|325134067|gb|EGC56722.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria meningitidis M13399] Length = 274 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 65/224 (29%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46 M K + + ++L + + S++ I +G + G Sbjct: 1 MLKKIVLGGIAALVLAACGGSEGGSGASSAPAQSAVSGSLIERINNKGTVTVGTEGTYAP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 61 FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + I S+ + G + KA Sbjct: 118 T-SPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTAQSLTSNYGE------KA 170 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 171 KAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214 >gi|254181368|ref|ZP_04887965.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei 1655] gi|254190768|ref|ZP_04897275.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|157938443|gb|EDO94113.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|184211906|gb|EDU08949.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei 1655] Length = 324 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I +K + P + Sbjct: 86 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NAKCTWTPQDLDGIIP 142 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149 AL++K+ D++ + T R + F Y I + SV L G + Sbjct: 143 ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVG 200 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E +++ + ++ +++ A + R DA D L Sbjct: 201 VEQGSTQETFAKAHWEPKG--VTIVSYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 258 Query: 210 RPSEHVILPDIISKSP------LAPAIIQGDTEWYNIVSWTH 245 R K P A + + D + ++ Sbjct: 259 RGKGFAWAG-PAVKDPRTLGDGTAMGLRKEDADLKEAINRAL 299 >gi|29829524|ref|NP_824158.1| arginine/ornithine binding protein [Streptomyces avermitilis MA-4680] gi|29606632|dbj|BAC70693.1| putative arginine/ornithine ABC transporter substrate-binding protein [Streptomyces avermitilis MA-4680] Length = 319 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 78/242 (32%), Gaps = 18/242 (7%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 ++ G +K G + +G G D D A+ + ++ Sbjct: 60 ESVRNAGVVKVGSDIAYAPVEFKDNSGKTVGIDPDLAEAMGKQLGVK---FEFQNGTFDT 116 Query: 88 RFLALQSKQIDILSRNTDWTLLREI----------SLGLAFRPITYFDGQGFIMH--KKK 135 L+SK+ DI T R+ G+ F + G K + Sbjct: 117 LITGLRSKRYDIAMSAMTDTKDRQEGVDSTTGKKVGEGVDFID-YFTAGVSIYTPKGKTQ 175 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPIVFERVEEIDAAYRAHRCDA 193 I + S L G + +Q GT +E K F+ ++ RA DA Sbjct: 176 NIKTWSDLCGKKLVLQRGTVSEDLAKSEAKKCPSGKTISIQAFDNDQQAQTRLRAGGADA 235 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 + D T+ + I+ + + +P A+ + +T+ + + A++ E Sbjct: 236 GSSDFPVAAYAVKTSGGGKDFQIVGEQVEAAPYGIAVAKSNTQLRDALQAALDAIIKNGE 295 Query: 254 LG 255 Sbjct: 296 YD 297 >gi|76808645|ref|YP_332660.1| amino acid ABC transporter periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710b] gi|254259172|ref|ZP_04950226.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei 1710a] gi|76578098|gb|ABA47573.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710b] gi|254217861|gb|EET07245.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei 1710a] Length = 324 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I +K + P + Sbjct: 86 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NAKCTWTPQDLDGIIP 142 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149 AL++K+ D++ + T R + F Y I + SV L G + Sbjct: 143 ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVG 200 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E +++ + ++ +++ A + R DA D L Sbjct: 201 VEQGSTQETFAKAHWEPKG--VTIVSYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 258 Query: 210 RPSEHVILPDIISKSP------LAPAIIQGDTEWYNIVSWTH 245 R K P A + + D + ++ Sbjct: 259 RGKGFAWAG-PAVKDPRTLGDGTAMGLRKEDADLKEAINRAL 299 >gi|300717678|ref|YP_003742481.1| lysine/arginine/ornithine ABC transporter, substrate-binding protein [Erwinia billingiae Eb661] gi|299063514|emb|CAX60634.1| lysine/arginine/ornithine ABC transporter, substrate-binding protein [Erwinia billingiae Eb661] Length = 260 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 72/221 (32%), Gaps = 13/221 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 L+ G + F A G GFD+D + + +K Y+ + +L+ Sbjct: 26 KTLRIGTDPTYAPFESKNAQGQLVGFDIDLANEICKRM---ETKCTYVESDFDALIPSLK 82 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQA 152 +K+ID + + T R + +AF Y I K I L G +I + Sbjct: 83 AKKIDAIISSLSITEKR--QMEIAFSEKLYAANARLIAPKGSKIMPTLDSLKGKTIGLLQ 140 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GTT E + ++ + P + + + A R DA D A L Sbjct: 141 GTTQETYANENWRPKGITVTP--YANQDLVYQDLTAGRIDAAFQDEVAASEGFLKQPAGK 198 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAM 248 + + + + D + + +M Sbjct: 199 GFAFAGPAVKDEKIFGVGTGMGMRKDDADLKAAIDKAFDSM 239 >gi|257414109|ref|ZP_04745253.2| bacterial extracellular solute-binding protein [Roseburia intestinalis L1-82] gi|257201196|gb|EEU99480.1| bacterial extracellular solute-binding protein [Roseburia intestinalis L1-82] Length = 271 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 82/235 (34%), Gaps = 10/235 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + +I + + ++ L G + + + +G G DV+ Sbjct: 6 KKYIAAIGICFMALGAACIMKKDPEEVGEELPELIIG-SDNYEPYNYLDDDGKPVGIDVE 64 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A+ + P + + ++ L + ++D L + + + Sbjct: 65 LAEAVCEQLGYTP---VFQYIVWDKKDEYLDNGKVDCLWGSFTMNGREDEYQ---WAGPY 118 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI-VFERVEE 181 + Q + I ++S L+G + VQA T E L + + + ++E Sbjct: 119 LYSRQVIAVRTDSKIRNISDLAGKRVAVQATTKPEEVLLERSDPRVPEVDMVYSLSGMDE 178 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 I A+ R DA TG SAL + + P + IL + + S L A + Sbjct: 179 IYASLRKGYVDAITGHESAL--ERFVGNAPDMYAILDESLYISELGVAFKNDTHQ 231 >gi|157144751|ref|YP_001452070.1| hypothetical protein CKO_00478 [Citrobacter koseri ATCC BAA-895] gi|157081956|gb|ABV11634.1| hypothetical protein CKO_00478 [Citrobacter koseri ATCC BAA-895] Length = 260 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 89/245 (36%), Gaps = 20/245 (8%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ G + F A G+ GFD+D + L I ++ ++ +L++ Sbjct: 27 KVRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153 K+ID + + T R +AF Y ++ K I +V L G + V G Sbjct: 84 KKIDAIMSSLSITEKR--QQEIAFTDKFYAADSRLVVAKDSDIQPTVESLKGKRVGVLQG 141 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT E +++ + + ++ + I + A R DA D A L + Sbjct: 142 TTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKD 199 Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + + L + + D E ++ +A + A+ +++K Sbjct: 200 YKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKY 252 Query: 269 TNPDV 273 + DV Sbjct: 253 FDFDV 257 >gi|255526251|ref|ZP_05393168.1| extracellular solute-binding protein family 3 [Clostridium carboxidivorans P7] gi|296186245|ref|ZP_06854649.1| bacterial extracellular solute-binding protein, family 3 [Clostridium carboxidivorans P7] gi|255510031|gb|EET86354.1| extracellular solute-binding protein family 3 [Clostridium carboxidivorans P7] gi|296049046|gb|EFG88476.1| bacterial extracellular solute-binding protein, family 3 [Clostridium carboxidivorans P7] Length = 266 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 90/253 (35%), Gaps = 14/253 (5%) Query: 1 MYKDFFVSILC--LIILFFTSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWK 57 M K+ I L I+ FT S+ S + +K G++ G + + Sbjct: 1 MIKNVKTVIAAGLLSIMMFTGCSSTNSTQAQGSGQNKVIKIGMSGGYYPYTFKNKDNKID 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GF+VD + P ++ + F L + ++D ++ T R+ Sbjct: 61 GFEVDVWNEIGKRTGYKPE---FVTASFSGLFGMLDAGKVDTIANEITITDKRK--DKYL 115 Query: 118 FRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G ++ K I+ + L G I V G+ E + D K++ + + Sbjct: 116 FTDAYVYSGAQIMVKKGNNSITKLDDLKGKKIGVSLGSNYEQIVKDNDKSN--SIKVVTY 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + R DA D + A+ N P + D+ A ++ + E Sbjct: 174 DNDGGMRQDVALGRIDAMMDDKVSALAVVQENKLPLQLAG-KDVQPLE-NAFPFVK-NDE 230 Query: 237 WYNIVSWTHYAMV 249 IV + A+V Sbjct: 231 NKKIVEKVNKALV 243 >gi|257066001|ref|YP_003152257.1| polar amino acid ABC transporter, inner membrane subunit [Anaerococcus prevotii DSM 20548] gi|256797881|gb|ACV28536.1| polar amino acid ABC transporter, inner membrane subunit [Anaerococcus prevotii DSM 20548] Length = 490 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 77/228 (33%), Gaps = 13/228 (5%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I G + G + + + + + G D D +A++ + +++ ++ Sbjct: 27 EKIVDDGVIDLGTSADFPPYEYYEGD-EIVGIDPDIVKAIAEELG---LEVKLHDMDFNN 82 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 ++QS ++D + T R+ + F Q + K I + L G Sbjct: 83 IIASIQSGKVDGGAAGFTVTEERKK--SVNFTEPFAKTSQIIVKRKDSDIEEIEDLEGKK 140 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + Q G+ + D F N F +V + + ++ + DA D + Sbjct: 141 LGTQLGSIGDTIAKDDFGEEN----VSSFNKVPDAILSLQSKKIDAVILDKQSAENFVNA 196 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 N + I+ + A A+ + + ++ + E+ Sbjct: 197 NK---DLEIVDTPYLEEEYAIAVNKDNPVLLEKMNEAITKLKEEGEID 241 >gi|89902567|ref|YP_525038.1| extracellular solute-binding protein [Rhodoferax ferrireducens T118] gi|89347304|gb|ABD71507.1| extracellular solute-binding protein, family 3 [Rhodoferax ferrireducens T118] Length = 255 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 42/243 (17%), Positives = 78/243 (32%), Gaps = 18/243 (7%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 V+ L+ L S + L G + FA + G+DVD + Sbjct: 7 IVASAGLLTLALGSVQA---------QNKELVVGSSATYRPFAYENPAKEIVGYDVDIIK 57 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++ +I+ + F AL + +D++ R+ F + Sbjct: 58 AVAQKAG---LQIKVVNTPWTGIFAALNNGDVDLVISGVTINDKRK--QSYDFTMPYFEA 112 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 Q + K S+ L+G I V G+T + T++ F N FE + + Sbjct: 113 RQLIAVQKDSTAKSLKDLAGKKIGVVTGSTGDDTVSREFGKTNPD--IRRFESTPVVISE 170 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 DA GD + + + K + QG+ + ++ Sbjct: 171 LVNSGVDAAIGDNGVIAFRVQEHKQLKTVN--DPSFPKEYFGIVVKQGNKALLDKLNAGL 228 Query: 246 YAM 248 A+ Sbjct: 229 SAI 231 >gi|291618032|ref|YP_003520774.1| ArgT [Pantoea ananatis LMG 20103] gi|291153062|gb|ADD77646.1| ArgT [Pantoea ananatis LMG 20103] Length = 265 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 83/236 (35%), Gaps = 21/236 (8%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 +F A I++ ++ ++ F G GFD+D AL + + + Sbjct: 21 GCAFGAQA----KIEQ---VRFAVDPTYPPFESKTPQGKLVGFDIDLGNALCAQM---QA 70 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K ++ AL++++ D + + T R + F Y I K G Sbjct: 71 KCVWVESQFDGMIPALKARKFDAILSDMGITEER--LKQIDFTQPLYDTHAQLIARKGSG 128 Query: 137 -ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + + L G ++ V+ GT E ++ H + + ++++ A R DA Sbjct: 129 LLPTPESLKGKTVGVEQGTVQERYARAKWQPHG--VTVVPYGDQAQVESDLVAGRLDAVF 186 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246 D + L + + L I + P+ A + +GD E + Sbjct: 187 TDAAQAANGFLKQPQGKDF-ALAGPIVQDPIIGPGTAIGLRKGDAELKTALDTAFN 241 >gi|170758226|ref|YP_001787409.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A3 str. Loch Maree] gi|169405215|gb|ACA53626.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A3 str. Loch Maree] Length = 272 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 73/226 (32%), Gaps = 25/226 (11%) Query: 1 MYKDFFVSILCLIILFF-----------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49 M K + +II T+ + S + IK+ G L G + Sbjct: 1 MNKKILGKLGAIIISLTMIISLVACGKNTASNEGKSKVDKIKESGKLVVGTCADYPPYEF 60 Query: 50 ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + + GFD+ + ++ + ++ + ALQS +DI+ + Sbjct: 61 HKTINGKDEIVGFDITIAKEIAKDLGVK---LEIKDMKFDGLLAALQSGNVDIVIAGMNP 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F I Y Q ++ + S+ + G I VQ GTT E + Sbjct: 118 TEDRKK--SVDFSKIYYQAIQSVVVRAEDKDKFKSLDEFKGKKIGVQKGTTQE----EVA 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 K +V ++ + + D + + Sbjct: 172 KKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGKN 217 >gi|326565594|gb|EGE15757.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis 12P80B1] gi|326572014|gb|EGE22016.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis BC8] Length = 265 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 30/242 (12%), Positives = 71/242 (29%), Gaps = 17/242 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKR-------GFLKCGINTGLVGFAEVKAN 53 M + + + S ++ L + F+ + Sbjct: 1 MTTVLKFTTAAFCVSLLAACSNESTTNTKTTAAPNSSTSQKELIIATESSFKPFSYLDKQ 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF++D AL + D Q + + +L + + D + T R Sbjct: 61 GQLVGFEIDLANALCKQMQAD---CQIVSQDWDSLIPSLNANKSDAIMAGMSITEER--L 115 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + + I K +++ ++G ++ Q T + L ++ N Sbjct: 116 NAVDFSEPYFDNTLVLIGKKDNTA-TINDIAGKAVATQQATVSAEYLQKHYPDAN----I 170 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +++ + A R + D+ T + I + A+ + Sbjct: 171 KTYDKQDNAYLDLTAGRVEFMLSDVVPATDWLATEAGSEFEIKGMPIDIGDKVGIAVRKD 230 Query: 234 DT 235 + Sbjct: 231 SS 232 >gi|117619357|ref|YP_855198.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560764|gb|ABK37712.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 245 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 37/256 (14%), Positives = 83/256 (32%), Gaps = 30/256 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + +L + + +K F + +++GFD Sbjct: 1 MKKSLLL-VAAMGLLSTSVLA------------KEIKFATEATYAPFEYLDDKNEFQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D RA+ + + +L+ ++ D D T R + F Sbjct: 48 IDLARAICEQA---KLECSFHNQAFDSLIPSLKFRRYDAAIAAMDVTPERAA--QVDFSD 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y + F+ K +L ++ VQ GT+ + L D + + + + + Sbjct: 103 IYYQNSAVFVTKKG-AFKGPEELVDKTVGVQNGTSHQSYLVDNWVSKG--LLTVPYASYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 R D D + + E+ ++ ++ + A+ +G+ Sbjct: 160 SAFLDMMNGRTDGVFADTAVAADWLKQHK---EYAVIGTPVTDAKYFGTGFGIAVAKGNQ 216 Query: 236 EWYNIVSWTHYAMVTA 251 E ++ A + A Sbjct: 217 ELLTQLNKGL-ADIKA 231 >gi|293397143|ref|ZP_06641417.1| lysine/arginine/ornithine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] gi|291420614|gb|EFE93869.1| lysine/arginine/ornithine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] Length = 260 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 86/249 (34%), Gaps = 21/249 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K +++ L S L + G L+ G+ F A+G +GFD+D Sbjct: 2 KTTLKTLIAAGCLL-----AAGSTLAA--EHG-LRFGVEALYPPFESKSASGQLEGFDID 53 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A+ +A + ++ + ALQ+++ D+++ + T R+ + F Sbjct: 54 LGNAVCAAA---KLQCSWVETSFDSLIPALQARKFDVINSAMNVTEQRK--QAIDFTKAI 108 Query: 123 YFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y I G+ + + L+G + V G+ E ++ + ++ + Sbjct: 109 YQVPNRLIAKADSGLTPNATALAGKRVGVLQGSIQENYAKAHWAPQG--VEVVAYQDQNQ 166 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGDTE 236 + A R DA A + L + + D + +A + + + E Sbjct: 167 VYLDLTAGRLDATLIMAPAGQSGFLAHPDGKGFAFVGDAVQDEKIFGSGIAFGLRKDERE 226 Query: 237 WYNIVSWTH 245 + Sbjct: 227 LKQRLDAAI 235 >gi|257125598|ref|YP_003163712.1| extracellular solute-binding protein family 3 [Leptotrichia buccalis C-1013-b] gi|257049537|gb|ACV38721.1| extracellular solute-binding protein family 3 [Leptotrichia buccalis C-1013-b] Length = 246 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 85/257 (33%), Gaps = 28/257 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K FF+ L + + + L+ G+N F + NG GFD Sbjct: 1 MKKIFFILTLAMFGIISCGKKADNG-------EKKLRVGLNAVFAPFEYI-ENGQVTGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ + + ++ + + AL++ +IDI+ T R+ + F Sbjct: 53 VEMINEIGKNLGYK---VEIIDQSFDGLIPALKAGKIDIIVSGMSSTEERKK--SVDFTD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + ++ K + + LSG I VQ GT E+ A + E Sbjct: 108 DYFVSKETYLRKKGNNAVTPTTLSGKKIGVQLGTIQEMEARTIKGA-----TVVPNENTV 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +A + DA + + A + P + P+ A+ + + Sbjct: 163 NTILDLKAGKIDAIILEKA--VATEYMKKNPEMEIFDEKPA---PIGMAMAVDKGKNPEL 217 Query: 241 VSWTHYAMVTAEELGIT 257 + + AE + Sbjct: 218 IKQ-----INAELKKMR 229 >gi|124385036|ref|YP_001028962.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia mallei NCTC 10229] gi|217420154|ref|ZP_03451660.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei 576] gi|237811359|ref|YP_002895810.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei MSHR346] gi|254298305|ref|ZP_04965757.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei 406e] gi|124293056|gb|ABN02325.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia mallei NCTC 10229] gi|157808271|gb|EDO85441.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei 406e] gi|217397458|gb|EEC37474.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei 576] gi|237504242|gb|ACQ96560.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei MSHR346] Length = 324 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I +K + P + Sbjct: 86 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NAKCTWTPQDLDGIIP 142 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149 AL++K+ D++ + T R + F Y I + SV L G + Sbjct: 143 ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVG 200 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E +++ + ++ +++ A + R DA D L Sbjct: 201 VEQGSTQETFAKAHWEPKG--VTIVSYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 258 Query: 210 RPSEHVILPDIISKSP------LAPAIIQGDTEWYNIVSWTH 245 R K P A + + D + + ++ Sbjct: 259 RGKGFAWAG-PAVKDPRTLGDGTAMGLRKEDADLKDAINRAL 299 >gi|172061357|ref|YP_001809009.1| cationic amino acid ABC transporter periplasmic binding protein [Burkholderia ambifaria MC40-6] gi|171993874|gb|ACB64793.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia ambifaria MC40-6] Length = 258 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I K ++ + Sbjct: 20 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI---NVKCVWVAQDLDGIIP 76 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149 AL++K+ D++ + T R + F Y I + +V+ L G + Sbjct: 77 ALKAKKYDVIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKAGSPLLPTVASLKGKHVG 134 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E Y++ I ++ +++ A + R DA D L Sbjct: 135 VEQGSTQETYAKAYWEPQG--VTVIPYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 192 Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245 R K P A + + DT+ ++ Sbjct: 193 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKLRINKAL 233 >gi|110678538|ref|YP_681545.1| amino-acid ABC transporter, periplasmic binding protein [Roseobacter denitrificans OCh 114] gi|109454654|gb|ABG30859.1| amino-acid ABC transporter, periplasmic binding protein [Roseobacter denitrificans OCh 114] Length = 278 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 8/227 (3%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA----LSSAIFDDPSKI 78 +A L IK+ G L G T + + N + KG+ C A +++ + +I Sbjct: 19 HAQTLERIKQNGQLVIGFRTDAAPLSYLGEN-EPKGYTPTVCYALASKIAAEVEVPDLEI 77 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + A++RF + + ID+L TL R + F Y DG ++ K Sbjct: 78 IFRSVTAEDRFEQVANGNIDLLCGAATITLER--RELVDFSVPIYVDGTVVVLKKGGP-D 134 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 S+ L+G + V+A TTT L + A ++ ++F+ AA AY D Sbjct: 135 SLEGLAGMKVGVRAATTTLEALQNSLAAADIAAEVVIFDDHPTGMAALEQDEIAAYFADQ 194 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 S L + + ++ +E + +++ A+ +GDTE+ +V Sbjct: 195 SILMNMVMQSEVANELKVFDQLLTVEKQGLAMARGDTEFRLVVDRGL 241 >gi|1065303|pdb|1LAF|E Chain E, Structural Bases For Multiple Ligand Specificity Of The Periplasmic Lysine-, Arginine-, Ornithine-Binding Protein gi|1065310|pdb|1LAG|E Chain E, Structural Bases For Multiple Ligand Specificity Of The Periplasmic Lysine-, Arginine-, Ornithine-Binding Protein gi|1065315|pdb|1LAH|E Chain E, Structural Bases For Multiple Ligand Specificity Of The Periplasmic Lysine-, Arginine-, Ornithine-Binding Protein gi|157835300|pdb|2LAO|A Chain A, Three-Dimensional Structures Of The Periplasmic Lysine-, Arginine-, Ornithine-Binding Protein With And Without A Ligand Length = 238 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 85/245 (34%), Gaps = 20/245 (8%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ G +T F+ A G++ GFD+D + + K ++ + +L++ Sbjct: 5 TVRIGTDTTYAPFSSKDAKGEFIGFDIDLGNEMCKRM---QVKCTWVASDFDALIPSLKA 61 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153 K+ID + + T R +AF Y I K I ++ L G + V G Sbjct: 62 KKIDAIISSLSITDKR--QQEIAFSDKLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQG 119 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T E D ++ + + + + I + A R DA D A L E Sbjct: 120 STQEAYANDNWRTKGVD--VVAYANQDLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKE 177 Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + + + + DTE EL ++++K Sbjct: 178 YAFAGPSVKDKKYFGDGTGVGLRKDDTELKAAFDKALT------ELRQDGT-YDKMAKKY 230 Query: 269 TNPDV 273 + +V Sbjct: 231 FDFNV 235 >gi|237808726|ref|YP_002893166.1| extracellular solute-binding protein family 3 [Tolumonas auensis DSM 9187] gi|237500987|gb|ACQ93580.1| extracellular solute-binding protein family 3 [Tolumonas auensis DSM 9187] Length = 259 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 88/239 (36%), Gaps = 10/239 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 A L DI+++G LK + F V A+ G+D+D L+ + K++ + Sbjct: 21 AKADQLDDIQQKGVLKVAVPQDFPPFGSVGADMQPYGYDIDMAGYLAQKL---NVKLELV 77 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ + R LQ+K++D++ + RE + F G + + + Sbjct: 78 PVTSANRIPYLQTKKVDLVISSLGKNPEREKV--IDFSNAYAPFFLGVFGAESVALKTSD 135 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +L+ +I V G ++ L+ A FE +AY + + D + Sbjct: 136 ELADKTIGVTRGAVEDMELSKIAPA---STTVKRFEDNNTTLSAYLSGQIDLIATGNVVI 192 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 + P ++ SP I +G+T V+ A + L +N Sbjct: 193 AEIASRM--PDRKPATKFMLKNSPCFIGIYKGETRLQQKVNELITAARSDGSLNKFSEN 249 >gi|254196399|ref|ZP_04902823.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei S13] gi|169653142|gb|EDS85835.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei S13] Length = 361 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I +K + P + Sbjct: 123 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NAKCTWTPQDLDGIIP 179 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149 AL++K+ D++ + T R + F Y I + SV L G + Sbjct: 180 ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVG 237 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E +++ + ++ +++ A + R DA D L Sbjct: 238 VEQGSTQETFAKAHWEPKG--VTIVSYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 295 Query: 210 RPSEHVILPDIISKSP------LAPAIIQGDTEWYNIVSWTH 245 R K P A + + D + + ++ Sbjct: 296 RGKGFAWAG-PAVKDPRTLGDGTAMGLRKEDADLKDAINRAL 336 >gi|302558466|ref|ZP_07310808.1| arginine/ornithine binding protein [Streptomyces griseoflavus Tu4000] gi|302476084|gb|EFL39177.1| arginine/ornithine binding protein [Streptomyces griseoflavus Tu4000] Length = 320 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 42/244 (17%), Positives = 78/244 (31%), Gaps = 20/244 (8%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I+ +G +K G + +G G D D A+ + ++ Sbjct: 59 QSIRDKGVVKVGSDIAYAPVEFKDDSGKVVGIDPDLAAAMGKQLG---VTFEFENATFDT 115 Query: 88 RFLALQSKQIDILSRNTDWTLLREISL----------GLAFRPITYFDGQGFIMHK--KK 135 L SK+ D+ T R+ + G+ F + G +K + Sbjct: 116 LIGGLASKRYDMAMSAMTDTKDRQEGVDADTGKKVGAGVDFVD-YFTAGVSLYTNKGADQ 174 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFK----AHNMKYHPIVFERVEEIDAAYRAHRC 191 GI + L G ++ VQ T + D K A F+ E + R+ Sbjct: 175 GIKTWDDLCGKTMAVQRNTFSHDLAKDQAKKCTDAGEKTLKIEPFDTNPEAETRMRSKGA 234 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 D + D + I+ D + P A+ + +TE + + A++ + Sbjct: 235 DVVSADFPIAAYSVKNSGGGKYFQIVGDQVEAGPYGIAVAKDNTELRDALQAAVQAVIDS 294 Query: 252 EELG 255 E Sbjct: 295 GEYQ 298 >gi|152971237|ref|YP_001336346.1| histidine ABC transporter periplasmic substrate-binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895828|ref|YP_002920564.1| histidine transport system periplasmic binding component [Klebsiella pneumoniae NTUH-K2044] gi|288934234|ref|YP_003438293.1| cationic amino acid ABC transporter periplasmic binding protein [Klebsiella variicola At-22] gi|290508437|ref|ZP_06547808.1| histidine-binding periplasmic protein [Klebsiella sp. 1_1_55] gi|329997347|ref|ZP_08302730.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Klebsiella sp. MS 92-3] gi|150956086|gb|ABR78116.1| histidine transport protein (ABC superfamily, peri_bind) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548146|dbj|BAH64497.1| histidine transport system periplasmic binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288888963|gb|ADC57281.1| cationic amino acid ABC transporter, periplasmic binding protein [Klebsiella variicola At-22] gi|289777831|gb|EFD85828.1| histidine-binding periplasmic protein [Klebsiella sp. 1_1_55] gi|328539096|gb|EGF65132.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Klebsiella sp. MS 92-3] Length = 260 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 77/216 (35%), Gaps = 13/216 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ G + F A G+ GFD+D + L I ++ ++ +L++ Sbjct: 27 KIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153 K+ID + + T R +AF Y ++ K + ++ L G + V G Sbjct: 84 KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVKKGSPVTPDLATLKGKRVGVLQG 141 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT E +++ + + ++ + I + A R DA D A L + Sbjct: 142 TTQETYGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPIGKD 199 Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244 + I L + + D E ++ Sbjct: 200 YQFGGPSIKDEKLFGVGTGMGLRKEDNELREALNKA 235 >gi|89895380|ref|YP_518867.1| hypothetical protein DSY2634 [Desulfitobacterium hafniense Y51] gi|89334828|dbj|BAE84423.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 281 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 89/254 (35%), Gaps = 20/254 (7%) Query: 1 MYKDF---------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M K++ SIL + + D L G+ F Sbjct: 1 MKKNYLLLLTAALLISSILLGCSKSQAPANQPSQAGNDAAAAQELIVGMELAYPPFEMTD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G G VDF + L +A+ ++ + ALQ+K+ID++ + T R+ Sbjct: 61 EKGSPTGVSVDFAKDLGAALG---RPVKIENMAFSGLIPALQTKKIDMVISSMTITDERK 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNM 169 ++ F ++++K + V L G + V+ GTT + A+ Sbjct: 118 KTVA--FSDPYAKAWLALLINEKSSVKEVKDLNAPGRKVAVKNGTTGHIYAQ----ANLP 171 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + +VFE+ + DA+ D ++Y N++ + + P A Sbjct: 172 QAEIMVFEKESACILEVGQGKADAFIYDTLSIYRAWKQNEKTTRANLNPFQDKVEEWGVA 231 Query: 230 IIQGDTEWYNIVSW 243 + Q D E V+ Sbjct: 232 LRQDDKELTAKVNQ 245 >gi|315637960|ref|ZP_07893146.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter upsaliensis JV21] gi|315481995|gb|EFU72613.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter upsaliensis JV21] Length = 252 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 36/237 (15%), Positives = 76/237 (32%), Gaps = 15/237 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++ + LF + S ++ D L+ G F + G D Sbjct: 1 MRK-IFAFLVAFLSLFVAACSDTSTTNNDSNASLSLRVGTAPNYKPFDYK-EDAKLTGLD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + ++ ++ ++ AL++ +ID+++ T + + F Sbjct: 59 IDLVNEIAKR---EGIELTWVEMSFDGLIPALKTGKIDMIASAMSATE--DRRKSVDFSD 113 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y +I K ++S L G I VQ GT L + E + Sbjct: 114 VYYTTKNLYIKKKDNETLNSKEDLEGKIIGVQLGT-----LQEPAAKAIKDTKVQSNESL 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + DA D + + + A + + Sbjct: 169 SVVIMELKEGKIDAVVADKDVSTGYL--KENADLIGFFEEEDGSEGFSFAFDKDKQK 223 >gi|149181760|ref|ZP_01860251.1| amino acid ABC transporter substrate-binding protein [Bacillus sp. SG-1] gi|148850501|gb|EDL64660.1| amino acid ABC transporter substrate-binding protein [Bacillus sp. SG-1] Length = 266 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 83/253 (32%), Gaps = 24/253 (9%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K F + L L + + S + S L + G + F+ Sbjct: 1 MKKLFSFAALSLSAVLISGCGTSETGSGSASDSGLDLV-DEGKFTYAASGEFKPFSVTSG 59 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 +G GFD++ A++ + DP + ++ +Q+ + D + T R Sbjct: 60 DGTMTGFDIEVAEAVAKELGLDPEQKKFK---FAGIVEGVQAGRFDAAVASHTITDERAE 116 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + F Y+ G + + ++ L G I V G+T T ++ + + Sbjct: 117 --KVDFSTPYYYSGPQIFVRPDSDVETLEDLEGMEIAVSKGSTYADTASE------VTEN 168 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++ A + DA D + +++ +S A A+ Q Sbjct: 169 IKTYDSDVVALEALSKGKHDAVITDFVTGKEAI----GAGLEIDTRELLGRSEQAIAVAQ 224 Query: 233 GDTEWYNIVSWTH 245 + E ++ Sbjct: 225 DNDELLEAINEAL 237 >gi|322369617|ref|ZP_08044181.1| ABC-type transport system periplasmic substrate-binding protein (probable substrate glutamine) [Haladaptatus paucihalophilus DX253] gi|320550787|gb|EFW92437.1| ABC-type transport system periplasmic substrate-binding protein (probable substrate glutamine) [Haladaptatus paucihalophilus DX253] Length = 273 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 69/233 (29%), Gaps = 24/233 (10%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 G + G + F A+G +GFD A+ D ++ + Sbjct: 33 DTGKILIGSDIPYKPFEYRTADGSLEGFDPGIAEAIFKGQLDRE--YEFKKAGFDTIIDS 90 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 L++K ++ T R + F + Q + K GI + L G ++ VQ Sbjct: 91 LKNKNFRLIMSAMTITDKRAE--KVDFSDPYFTAYQTVAIRKGGGIEKLDDLKGKTVAVQ 148 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN--- 208 GTT E + ++++ A R + A D + Sbjct: 149 KGTTGESAAEKVKEDFGGSLTIHSYDQIAGAFNALRNQQAVAVINDNTVNAEFVNKMDGV 208 Query: 209 -------------DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 +++ L + A + D + V+ A+ Sbjct: 209 VFLEGEGEAAKQGKNAPDYLTL----TIEEYGIAFRKDDDDLRKQVNEAIKAI 257 >gi|317047452|ref|YP_004115100.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316949069|gb|ADU68544.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 273 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 87/256 (33%), Gaps = 15/256 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K ++ ++L ++++ A + IK++G L I + G Sbjct: 1 MKKLLLSAVSAALLLQSSAWADIA-VPASIKEKG-LTVAIMPNYPPMDFKDPASNQLTGV 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D D A+ + I + + ++ A+ +K++D++ T R+ + F Sbjct: 59 DYDLGMAIGQKLGVK---INWQEIAFEQMVNAVVTKRVDMVMSGMTDTKERQKV--VNFI 113 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-----NMKYHPI 174 Q + + + I+S L G + TT +A++ K H + Sbjct: 114 DYFKTGPQFYTLSARSDINSAMDLCGKRVGTSRRTTFPQEIANWSKEHCESAGKPAIVVV 173 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E + R R DA S + ++ + L S AI + Sbjct: 174 GAEGTADARTQLRQRRLDAAVQG-SETLPYIMDLEKGT-FKPLDKAFSFQYTGMAIGKDA 231 Query: 235 TEWYNIVSWTHYAMVT 250 ++ V AM+ Sbjct: 232 SDLTTAVQGALDAMIA 247 >gi|134281021|ref|ZP_01767730.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei 305] gi|134247327|gb|EBA47412.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei 305] Length = 324 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 77/222 (34%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I +K + P + Sbjct: 86 KEWKTVRIGVDASYPPFESTAPSGEVVGFDVDLAKEVCKRI---NAKCTWTPQDLDGIIP 142 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149 AL++K+ D++ + T R + F Y I + SV L G + Sbjct: 143 ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKRVG 200 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E +++ + ++ +++ A + R DA D L Sbjct: 201 VEQGSTQETFAKAHWEPKG--VTIVSYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 258 Query: 210 RPSEHVILPDIISKSP------LAPAIIQGDTEWYNIVSWTH 245 K P A + + D + ++ Sbjct: 259 HGKGFAWAG-PAVKDPRTLGDGTAMGLRKEDADLKEAINRAL 299 >gi|82544791|ref|YP_408738.1| lysine-, arginine-, ornithine-binding periplasmic protein [Shigella boydii Sb227] gi|81246202|gb|ABB66910.1| lysine-, arginine-, ornithine-binding periplasmic protein [Shigella boydii Sb227] Length = 260 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ ++ +++ + L + ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYALFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E + +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L + + + + D Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257 >gi|260881751|ref|ZP_05405151.2| glutamine ABC transporter, glutamine-binding protein [Mitsuokella multacida DSM 20544] gi|260848319|gb|EEX68326.1| glutamine ABC transporter, glutamine-binding protein [Mitsuokella multacida DSM 20544] Length = 283 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 54/309 (17%), Positives = 93/309 (30%), Gaps = 67/309 (21%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAI 71 + S KK L+ G++ F ++GFDVD RA+ + Sbjct: 35 TAALTAGCGQSDSAEQSGKK--VLRVGMDASYPPFGSQNQETKDYEGFDVDIIRAIGAEE 92 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 D ++ + ALQ+K+ID+ + T + + F Y G G ++ Sbjct: 93 GFD---VEISNRSFDGLIPALQAKEIDVAINDITITD--DRKQSVDFSKPYYIAGLGVVV 147 Query: 132 HK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 I + L G ++ V G+T E A+ VF + E + Sbjct: 148 RSDNDTIHTAEDLQGKTLGVSIGSTGEEAARKIPGAN-----VRVFNAINEAFLEVQNGG 202 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 DA DI ++K L A+++G+TE + Sbjct: 203 VDAVVNDIPTNEYYVSHAGN-KNVRTAEVALTKEDLGIAVLKGNTELLTKIDD------- 254 Query: 251 AEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMF 310 GL K I+ G + E++ Sbjct: 255 ---------------------------------------GLAK------IKANGKFSEIY 269 Query: 311 DRNLGNQSE 319 ++ G Q Sbjct: 270 EKWFGKQPP 278 >gi|13472037|ref|NP_103604.1| binding protein component of amino acid ABC transporter [Mesorhizobium loti MAFF303099] gi|14022782|dbj|BAB49390.1| probable binding protein component of amino acid ABC transporter [Mesorhizobium loti MAFF303099] Length = 262 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 48/223 (21%), Positives = 80/223 (35%), Gaps = 11/223 (4%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +I KRG L+ + T F+ V ANG+ G V+ ++ + + + + Sbjct: 24 TLDEITKRGELRVAVQTQGPPFSLVGANGERTGSSVELAELMAKEMGVKIKFLDF---DW 80 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-- 143 AL S + D+L + TL R + +AF + G + Sbjct: 81 DGLIPALLSGKADLLVADMTPTLAR--GMKVAFTTPYMYTGSTVFTKADSKFKTTEDCKA 138 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G I V G T E F ++K + A + D D+SA+ Sbjct: 139 KGTKIAVLLGATGEKEAKTAFPDADIKS---YKGGGPLLLDAVNNGQADCGVNDVSAVKG 195 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 S I+PD++SK PLA A + + ++ Sbjct: 196 QSTAYPAGS-FTIMPDLLSKEPLAFATRYDEPDLLVWMNLFLN 237 >gi|107023341|ref|YP_621668.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia cenocepacia AU 1054] gi|116690424|ref|YP_836047.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia cenocepacia HI2424] gi|170733744|ref|YP_001765691.1| cationic amino acid ABC transporter periplasmic binding protein [Burkholderia cenocepacia MC0-3] gi|105893530|gb|ABF76695.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116648513|gb|ABK09154.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] gi|169816986|gb|ACA91569.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia cenocepacia MC0-3] Length = 260 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I K ++ + Sbjct: 20 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI---NVKCVWVAQDLDGIIP 76 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149 AL++K+ D++ + T R + F Y I + +V+ L G + Sbjct: 77 ALKAKKYDVIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKTGSPLLPTVASLKGKRVG 134 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E Y++ + ++ +++ A R DA D L Sbjct: 135 VEQGSTQETYAKAYWEPQG--VTIVPYQNQDQVYADLGTGRLDATLQDELQADYGFLRTP 192 Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245 R K P A + + DT+ ++ Sbjct: 193 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKLRINQAL 233 >gi|326624179|gb|EGE30524.1| lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 251 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 93/267 (34%), Gaps = 25/267 (9%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 +++ + + + + L ++ G +T F+ A G++ GFD+D + + Sbjct: 1 MLIGLGATAASYAALPQ-----TVRIGTDTTYAPFSSKDAKGEFIGFDIDLGNEMCKRM- 54 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 K ++ + +L++K+ID + + T R +AF Y I Sbjct: 55 --QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSDKLYAADSRLIAA 110 Query: 133 KKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 K I ++ L G + V G+T E D ++ + + + + I + A R Sbjct: 111 KGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVD--VVAYANQDLIYSDLTAGRL 168 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246 DA D A L E+ + + + DTE Sbjct: 169 DAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLRKDDTELKAAFDKALI 228 Query: 247 AMVTAEELGITQKNINQVSKDTTNPDV 273 EL ++++K + +V Sbjct: 229 ------ELRQDGT-YDKMAKKYFDFNV 248 >gi|296332722|ref|ZP_06875182.1| cystine ABC transporter (substrate-binding lipoprotein) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673067|ref|YP_003864739.1| cystine ABC transporter substrate-binding lipoprotein [Bacillus subtilis subsp. spizizenii str. W23] gi|296150002|gb|EFG90891.1| cystine ABC transporter (substrate-binding lipoprotein) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411311|gb|ADM36430.1| cystine ABC transporter (substrate-binding lipoprotein) [Bacillus subtilis subsp. spizizenii str. W23] Length = 268 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 77/263 (29%), Gaps = 26/263 (9%) Query: 1 MYKDFFVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFAE 49 M K + + I + + + IKK+G L G F Sbjct: 1 MKKALLALFMVVSIAVLAACGAGNDNQSKDNAKDGDLWASIKKKGVLTVGTEGTYEPFTY 60 Query: 50 VKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + G+DV+ ++ + K+ + F L SK+ D+++ T Sbjct: 61 HDKDTDKLTGYDVEVITEVAKRLG---LKVDFNETQWDSMFAGLNSKRFDVIANQVGKT- 116 Query: 109 LREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 + F + K I S + + G + Q+ T+ LA A Sbjct: 117 --DREDQYDFSDKYTTSRAVVVTKKDNNDIKSEADVKGKTSA-QSLTSNYNKLATDAGAK 173 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 E + + + R D D A+ T+ + + +S Sbjct: 174 -----VEGVEGLAQSLQLIQQGRVDMTYNDKLAVLNYLKTSGNKNVKIAFETGDPQSTY- 227 Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250 +G E + V+ M Sbjct: 228 FTFRKGSGEVVDQVNKALKEMKE 250 >gi|153834304|ref|ZP_01986971.1| cyclohexadienyl dehydratase [Vibrio harveyi HY01] gi|156972752|ref|YP_001443659.1| prephrenate dehydratase [Vibrio harveyi ATCC BAA-1116] gi|148869312|gb|EDL68326.1| cyclohexadienyl dehydratase [Vibrio harveyi HY01] gi|156524346|gb|ABU69432.1| hypothetical protein VIBHAR_00417 [Vibrio harveyi ATCC BAA-1116] Length = 258 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 77/245 (31%), Gaps = 14/245 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K L + +L T + S L ++ +G L+ G ++GF Sbjct: 1 MKKTLL--ALGMCLLAMTQVAHANSRLQEVLDKGVLRVGTTGDWNPMTMKDPATNSYRGF 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D L+ + ++Y+ + K + + + D ++ + + R G + Sbjct: 59 DIDVTTELAKDLGVK---VEYVATDWKTLVNGITANKYD-ITGSASLNMSRAKVAGYSQP 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 S + + GT E + D+F + IV E Sbjct: 115 YFYLAFVPVVQKKDLAKFSDWADFDKPDVKVAATLGTVQEKMVKDFFPSAQH----IVIE 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A R D L + V + + +P+A + Q D W Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVEKFKQ-LAIVPVKEPRKPTPIAMLLPQDDQVW 229 Query: 238 YNIVS 242 N ++ Sbjct: 230 INYIN 234 >gi|221200606|ref|ZP_03573647.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD2M] gi|221208433|ref|ZP_03581435.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD2] gi|221171621|gb|EEE04066.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD2] gi|221179178|gb|EEE11584.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD2M] Length = 261 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 90/254 (35%), Gaps = 22/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + L SF+ + S ++ GI+ F + +G GFD Sbjct: 1 MNRIAKLLTTALACAPLVSFAQDTST---------IRWGIDPTYPPFEAKQPDGSLSGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + + +K ++ N AL++++ D++ T R + F Sbjct: 52 IDLRDAICAQL---HAKCVWVEQNFDGMIPALRARKFDVIMSAMTATEER--LKQIDFSN 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + + S + L+G + + GTT ++ + + ++ Sbjct: 107 KLYASPAALVAPAGSKLQSTAASLAGKRVGIIQGTTQDMYAKAEWAPKG--VTIVTYQNQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +++ R DA D + L +R D I+ S + A + +GD Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTERGKHFAFAGDDITDSRITGFGVAMGLRKGD 224 Query: 235 TEWYNIVSWTHYAM 248 + ++ A+ Sbjct: 225 AALKSRLNDAIAAI 238 >gi|330969354|gb|EGH69420.1| extracellular solute-binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 273 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 78/257 (30%), Gaps = 21/257 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I L+ L ++ + L ++K L + F+ + + GFD Sbjct: 1 MNYRALLGI-GLVTLAASTQVLAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ + ++ + S + DI + + R Sbjct: 60 VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174 + I S LSG + + + ++ E L + P+ Sbjct: 116 YYASPAVIVVNASDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFED 175 Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 ++ R DA + L K D+ + + + + P + Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGESLYEEPNS 232 Query: 228 PAIIQGDTEWYNIVSWT 244 AI + D EW V Sbjct: 233 VAIEKDDPEWDAKVREV 249 >gi|296113903|ref|YP_003627841.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis RH4] gi|295921597|gb|ADG61948.1| extracellular solute-binding protein family 3 [Moraxella catarrhalis RH4] Length = 267 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 30/242 (12%), Positives = 71/242 (29%), Gaps = 17/242 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKR-------GFLKCGINTGLVGFAEVKAN 53 M + + + S ++ L + F+ + Sbjct: 3 MTTVLKFTTAAFCVSLLAACSNESTTNTKTTAAPNSSTSQKELIIATESSFKPFSYLDKQ 62 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF++D AL + D Q + + +L + + D + T R Sbjct: 63 GQLVGFEIDLANALCKQMQAD---CQIVSQDWDSLIPSLNANKSDAIMAGMSITEER--L 117 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + + I K +++ ++G ++ Q T + L ++ N Sbjct: 118 NAVDFSEPYFDNTLVLIGKKDNTA-TINDIAGKAVATQQATVSAEYLQKHYPDAN----I 172 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +++ + A R + D+ T + I + A+ + Sbjct: 173 KTYDKQDNAYLDLTAGRVEFMLSDVVPATDWLATEAGSEFEIKGMPIDIGDKVGIAVRKD 232 Query: 234 DT 235 + Sbjct: 233 SS 234 >gi|270720223|ref|ZP_06223378.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Haemophilus influenzae HK1212] gi|270315326|gb|EFA27627.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Haemophilus influenzae HK1212] Length = 253 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 78/255 (30%), Gaps = 19/255 (7%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F + L + F++FS I ++K L G F +G GFDV+ Sbjct: 1 LFTTALLTGAIAFSTFSHAGEIADRVEKTKTLLVGTEGTYAPFTFHSKDGKLTGFDVEII 60 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ + K+++ + L +K+ D+++ T E + + Sbjct: 61 EKVAEKLG---LKVEFKETAWDGMYAGLNAKRFDVIANQT--NPSPERLKKYDYSAPYNY 115 Query: 125 DGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 + I + S L G A + D + + + + Sbjct: 116 SAGVIVTKENNDSIKTFSDLKGKKSAQSATSNWSKDARD------NGAIIVTMDSLAQNL 169 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A + R D+ D A+ + + + K P ++G+ V+ Sbjct: 170 EAVKQERVDSTVNDKLAVLDYFKKQPNAGLKIAV-ESDKKIPTGFVFLKGEEALIAKVNK 228 Query: 244 THYAMVTAEELGITQ 258 EEL Sbjct: 229 AL------EELRQDG 237 >gi|218885963|ref|YP_002435284.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756917|gb|ACL07816.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 246 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 86/251 (34%), Gaps = 24/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ L++ +F+ + + V AN + GF Sbjct: 1 MLKKIVLTLAALLVTANVAFA-----------EKTIVVAQDATWPPMEFVDANKNLVGFS 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+ A++ KI + + F L+S D + + T R+ + F Sbjct: 50 VDYTDAMAKEAG---FKIVHKNVAWDGIFAGLESGSYDAIVSSVSITDERK--NAMDFTA 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y Q ++ K ++ + ++ G ++ Q TT T+ ++ + Sbjct: 105 PYYEVRQALVVPKTTNVTKLDEMKGKTLGGQISTTGYFTIKKTA-----GVTAKSYDEIG 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP---DIISKSPLAPAIIQGDTEW 237 R D D + L ++ + + + + K A+ +G+ E Sbjct: 160 LAMEDLFNGRIDGVVCDDPVAASYALQQEQYAAKMKIAFVIETQEKEFYGIAVKKGNKEV 219 Query: 238 YNIVSWTHYAM 248 ++++ A+ Sbjct: 220 LDLLNKGIAAV 230 >gi|167841591|ref|ZP_02468275.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia thailandensis MSMB43] Length = 258 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 79/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I +K + P + Sbjct: 20 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NAKCVWTPQDLDGIIP 76 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149 AL++K+ D++ + T R + F Y I + ++ L G + Sbjct: 77 ALKAKKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLAPTIESLKGKRVG 134 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E +++ + ++ +++ A + R DA D L Sbjct: 135 VEQGSTQETFAKAHWEPKG--VTIVSYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 192 Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245 R K P A + + D + + ++ Sbjct: 193 RGKGFAWAG-PAVKDPKTLGDGTAMGLRKDDADLKDAINRAL 233 >gi|148975202|ref|ZP_01812126.1| putative cyclohexadienyl dehydratase precursor signal peptide protein [Vibrionales bacterium SWAT-3] gi|145965126|gb|EDK30376.1| putative cyclohexadienyl dehydratase precursor signal peptide protein [Vibrionales bacterium SWAT-3] Length = 258 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 80/245 (32%), Gaps = 14/245 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K L + +L FT + S L +I G L+ G ++GF Sbjct: 1 MKKSLI--ALGMCLLVFTQIAHAQSRLQEILDAGVLRVGTTGDWNPMTMKDPATNSYRGF 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D L+ + ++Y+ + K + + + D ++ + + R G + Sbjct: 59 DIDVTTELAKDLGVK---VEYVATDWKTLVNGITANKYD-VTGSASLNMSRAKVAGYSQP 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFE 177 + S S A I V A T E + D+F + IV E Sbjct: 115 YFYLAFVPVVQKKDIEKFSDWSDFDKAEIKVAATLGTVQEKMVKDFFPSAQH----IVIE 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A R D L + V + + +P+A + Q D W Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVEKFKQ-LAIVPVKEPRKPTPIAMLLPQDDQVW 229 Query: 238 YNIVS 242 N ++ Sbjct: 230 INYIN 234 >gi|282917128|ref|ZP_06324886.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus D139] gi|282319615|gb|EFB49967.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus D139] Length = 485 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 92/283 (32%), Gaps = 25/283 (8%) Query: 3 KDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51 K IL L +L T+ + IK+RG L+ G++ V Sbjct: 2 KCLIRFILVLGLLISSAMVYINPTAHAEQDQAWEKIKERGELRVGLSADYAPMEFEHTVN 61 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++ G D+D + ++ + K++ + ++ AL++ +IDI+ T R+ Sbjct: 62 GKTEYAGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERK 118 Query: 112 ISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + F ++ K + + + Q GT E + Sbjct: 119 K--QVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE---- 172 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAP 228 R+ ++ A ++ + + + A N + +V + + +A Sbjct: 173 NASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA- 231 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + + + ++ T + + N D + Sbjct: 232 -VPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273 >gi|298695127|gb|ADI98349.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus subsp. aureus ED133] Length = 485 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 39/278 (14%), Positives = 93/278 (33%), Gaps = 23/278 (8%) Query: 6 FVSILCLIILFF------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 F+ IL L+I T+ + IK+RG L+ G++ V ++ Sbjct: 7 FILILGLLISSAMVYINPTAHAEQDQAWEKIKERGELRVGLSADYAPMEFEHTVNGKTEY 66 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D+D + ++ + K++ + ++ AL++ +IDI+ T R+ + Sbjct: 67 AGVDIDLAKKIAKD---NNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERKK--QV 121 Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F ++ K + + + Q GT E + Sbjct: 122 DFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE----NASIT 177 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQG 233 R+ ++ A ++ + + + A N + +V + + +A + + Sbjct: 178 SLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA--VPKD 235 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + + ++ T + + N D + Sbjct: 236 SPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGF 273 >gi|254247531|ref|ZP_04940852.1| hypothetical protein BCPG_02331 [Burkholderia cenocepacia PC184] gi|124872307|gb|EAY64023.1| hypothetical protein BCPG_02331 [Burkholderia cenocepacia PC184] Length = 262 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I K ++ + Sbjct: 22 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI---NVKCVWVAQDLDGIIP 78 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149 AL++K+ D++ + T R + F Y I + +V+ L G + Sbjct: 79 ALKAKKYDVIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKTGSPLLPTVASLKGKRVG 136 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E Y++ + ++ +++ A R DA D L Sbjct: 137 VEQGSTQETYAKAYWEPQG--VTIVPYQNQDQVYADLGTGRLDATLQDELQADYGFLRTP 194 Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245 R K P A + + DT+ ++ Sbjct: 195 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKLRINQAL 235 >gi|302868838|ref|YP_003837475.1| family 3 extracellular solute-binding protein [Micromonospora aurantiaca ATCC 27029] gi|302571697|gb|ADL47899.1| extracellular solute-binding protein family 3 [Micromonospora aurantiaca ATCC 27029] Length = 301 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 31/229 (13%), Positives = 66/229 (28%), Gaps = 14/229 (6%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 IK G + G ++ + +G GFDV+ A+++ + ++ Sbjct: 56 DAIKSDGKIVVGTDSTYAPAEFLDTDGKTVVGFDVELFTAVAAKLGLKAE---FVSAPFG 112 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SG 145 + + S + + + R+ + + G ++ K G Sbjct: 113 DIINGVNSGKYEAGVSSFTINDERKGQANM---VSYFQVGTQWVTKKGNPAGVTLDNACG 169 Query: 146 ASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 I VQ T + A F + AA + + DA D Sbjct: 170 KKIAVQKDTVQVEDIQKRSKACTDAGKPAITIDQFPGQDAATAAVVSGKDDAMLADYPVG 229 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 ++ +L +P + + T+ V A++ Sbjct: 230 VYAVTQSND--ALELLDKQYEAAPYGYVLAKEQTQLAEAVRDATKAVIA 276 >gi|227818838|ref|YP_002822809.1| amino acid ABC transporter substrate-binding protein [Sinorhizobium fredii NGR234] gi|36959096|gb|AAQ87521.1| Amino-acid binding protein [Sinorhizobium fredii NGR234] gi|227337837|gb|ACP22056.1| probable amino acid ABC transporter, substrate-binding protein [Sinorhizobium fredii NGR234] Length = 274 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 43/255 (16%), Positives = 87/255 (34%), Gaps = 12/255 (4%) Query: 2 YKDFF-VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 + F +++ + + + +A+ + +IK +G L GI + V +G GFD Sbjct: 5 RRSFLGLALATVAFATVGAAAASAASVEEIKAKGTLVVGIQGDNAPWGFVNTSGVQDGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D + + +Q+ PL R AL + ++DIL T R + + Sbjct: 65 ADVANLFAKELGVK---VQFQPLAVANRIPALTTGKVDILFATMAMTEERAK--SIQYSK 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + K ++ ++G I V ++ + + D A F+ Sbjct: 120 PYAANTISLYAAKSDTVTKPEDVAGWEIGVPKSSSQDKAVTD---AVGSTATVRRFDDDA 176 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + + A G+ Y +L + D ++ G+ +W Sbjct: 177 ATIQALISGQVKAVGGN--QFYGQRLDAASAGTYERKIDFLTT-YNGVGTRLGEKDWNEA 233 Query: 241 VSWTHYAMVTAEELG 255 V+ + EL Sbjct: 234 VNVFIDKIKANGELA 248 >gi|172056976|ref|YP_001813436.1| extracellular solute-binding protein [Exiguobacterium sibiricum 255-15] gi|171989497|gb|ACB60419.1| extracellular solute-binding protein family 3 [Exiguobacterium sibiricum 255-15] Length = 258 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 78/223 (34%), Gaps = 14/223 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKR-GFLKCGINTGLVGFAEVK-ANG-DW 56 M K ++ ++ + + + S KK L G + F + A G D Sbjct: 1 MKKLAATAMAGILAVTMAACGASEESTGDTTKKNDKVLTMGTSADYFPFEYIDTAKGDDI 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFDV + ++ + D ++ + AL + ++D + T R+ Sbjct: 61 VGFDVAIAKEVTKNLGYD---LKIEDMEFGSLLGALSAGRVDFVMAGMTPTDERKK--NA 115 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F I + +M K K I+S +L G + VQ G+ E D +K + Sbjct: 116 DFTDIYFQSKN-LVMTKDKAIASDDELKGKKLGVQLGSIQEALAKDRYK----DSEAVSL 170 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 ++ EI R DA + + + + I D Sbjct: 171 NKIPEIIQELNTGRIDALIIEDAVAVKYMDQDKALKTYEIKED 213 >gi|295697438|ref|YP_003590676.1| extracellular solute-binding protein family 3 [Bacillus tusciae DSM 2912] gi|295413040|gb|ADG07532.1| extracellular solute-binding protein family 3 [Bacillus tusciae DSM 2912] Length = 279 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 98/260 (37%), Gaps = 21/260 (8%) Query: 1 MYKDF----FVSILCLIILFFTSFST---------NASILGDIKKRGFLKCGINTGLVGF 47 M K F FV++ I+ S +T AS L IK+RG L G + V F Sbjct: 1 MKKFFKTALFVALAAAILAGCGSGATTTGSQAEGNKASTLEAIKQRGTLIVGSSND-VPF 59 Query: 48 AEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 A + + KG D + + ++ + K++ + + + L +K ID+++ Sbjct: 60 AYIDKDTKQLKGIDAEIIQEIAKRLG--IPKVEMKEIKFENLLVELNNKNIDMVTDGMYI 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 RE F Y +G+G ++ K IS + L + Q GT + + Sbjct: 118 KPEREKIAQ--FTHPWYKEGEGLVVRKDSTISGLEDLKDKVVGGQKGTAFLEYIQKM-QQ 174 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSP 225 VF E+ A + DA D + + + ++ P + + Sbjct: 175 QGKVKEVKVFGSQAELLLAINTDKIDAGITDSATAAYTIQHDPTLNVKLVSPYTPVFQGT 234 Query: 226 LAPAIIQGDTEWYNIVSWTH 245 +A A+ + DT+ V+ Sbjct: 235 VAAAVRKEDTDLLEAVNKEL 254 >gi|293397047|ref|ZP_06641321.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] gi|291420518|gb|EFE93773.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] Length = 258 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 79/245 (32%), Gaps = 22/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F L + L F S A L +T V F + N + GFD+D Sbjct: 14 KSIFNVSLAALSLAFAVSSHAAD---------KLVVATDTAFVPFEFKQGN-QYVGFDID 63 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K ID+ T R+ + F Sbjct: 64 LWAAIAKELKLDY---TLKPMDFGGIIPALQTKNIDLALAGITITDERKK--AIDFSDGY 118 Query: 123 YFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G + + SV L G + V++GT + + K F ++ Sbjct: 119 YKSGLLVMVNANNNDVKSVKDLDGKVVAVKSGTGSVDYVKQNVKTK----DLRQFPNIDN 174 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 R DA D + + + + D + A +G ++ V Sbjct: 175 AYMELGTQRADAVVHDTPNIL-YFIKTAGAGKFKTVGDSLEAQQYGIAFPKG-SDLREKV 232 Query: 242 SWTHY 246 + Sbjct: 233 NGALK 237 >gi|260776933|ref|ZP_05885827.1| polar amino acid uptake family ABC transporter substrate-binding protein [Vibrio coralliilyticus ATCC BAA-450] gi|260606599|gb|EEX32873.1| polar amino acid uptake family ABC transporter substrate-binding protein [Vibrio coralliilyticus ATCC BAA-450] Length = 518 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 89/234 (38%), Gaps = 13/234 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + FF ++ +L + + +L IK+ G + G+ + + +N GF+ Sbjct: 1 MIR-FFTLLISCCLLLPSVQAQ--DLLSKIKQSGRIVIGVKADYPPWGMLDSNNQPAGFE 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D + + A+ +++++ + + RF L Q+D+L ++ R P Sbjct: 58 PDLAQMIGHAL---NAEVEFKTVTSANRFQKLNEGQVDMLIATVGDSMQR-RQRVRMITP 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + G + HK + + L G +C+ AG +L ++ PI+ Sbjct: 114 HYFRSGVTALTHKSNSVEKWTDLIGKPVCLTAGAYFNKSLVQNYR-----IKPIILMSNR 168 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + A ++C A+ D S + S++ + + I + + Sbjct: 169 DSKLALLTNKCQAWAYD-SGILFHLSNQKEWSDYSVDVETIMPIHWSMVTRKDT 221 >gi|258425044|ref|ZP_05687915.1| extracellular solute-binding lipoprotein [Staphylococcus aureus A9635] gi|257844878|gb|EEV68921.1| extracellular solute-binding lipoprotein [Staphylococcus aureus A9635] gi|283471634|emb|CAQ50845.1| L-cystine-binding protein TcyA [Staphylococcus aureus subsp. aureus ST398] Length = 259 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 68/213 (31%), Gaps = 13/213 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + FV I + IL +++ K + G F+ +G G+D Sbjct: 1 MKRLLFVVIAFVFILAACGNNSSKDK-EASKDSKTINVGTEGTYAPFSFHDKDGKLTGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ A + K+++ + F L + + D+++ RE F Sbjct: 60 IDVIKAVAKA---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYK--FSK 114 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F ++ +K I + G + Q T+ LA A + Sbjct: 115 PYTFSSAVLVIRENEKDIKDFDDVKGKKLA-QTFTSNYGKLAKDKGA-----DITKVDGF 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 + + R D D + K Sbjct: 169 NQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAK 201 >gi|238026663|ref|YP_002910894.1| amino acid ABC transporter periplasmic amino acid-binding protein [Burkholderia glumae BGR1] gi|237875857|gb|ACR28190.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia glumae BGR1] Length = 265 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 78/255 (30%), Gaps = 22/255 (8%) Query: 1 MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + + +A+ L I + G+ F +G Sbjct: 1 MKLNWRKMAACAVATAAAVSFLSGAHAAELKQI------RFGVEASYAPFEYKTPDGKLA 54 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD A+ + + ++ + ALQ+++ D ++ + T R +A Sbjct: 55 GFDVDVGNAVCAKL---KVPCVWVENDFDGLIPALQARKFDAINSDMTITPQR--LHAIA 109 Query: 118 FRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y I K G + + + L G + V GT E + + + Sbjct: 110 FTDPIYSIPNQLIAKKGSGLLPTPASLKGKRVGVLQGTIQEAYAKARWAPAG--VEVVPY 167 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALY-ALKLTNDRPSEHVILPDIISKSPL----APAII 231 + + A ++ R DA D A P ++ L + Sbjct: 168 QTQDLAYADLQSGRLDATFQDSEAAAKGFLSKPQAAGFAFAGPQVVDAEILGSGVGYGLR 227 Query: 232 QGDTEWYNIVSWTHY 246 + DT ++ Sbjct: 228 KNDTALRAALNQALK 242 >gi|145298731|ref|YP_001141572.1| ABC-type amino acid transporter, periplasmic amino acid-binding protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142851503|gb|ABO89824.1| ABC-type amino acid transporter, periplasmic amino acid-binding protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 259 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 81/253 (32%), Gaps = 18/253 (7%) Query: 2 YKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 +K L FT ++ L I++ G L+ G++T +A G G Sbjct: 5 FKTALSGAALLFTALFTPAQAEGEASATLAQIEQSGTLRVGMST-FAPWAMRDKQGALIG 63 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F++D R L++ + +++++P +L +K+ D++ T RE + F Sbjct: 64 FEIDVARRLATD---NGWQVEFVPTAWDGIIPSLLAKKYDVIIGGLTITPEREK--SVRF 118 Query: 119 RPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 G K + S G + V+ G + + F Sbjct: 119 TQAYSHSGIQLAASKAQAQDKKTLSDFNQRGVILAVRRGASPVQVAKENFPKA----TLR 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F+ ++ R L + + + +S+ A+ +GD Sbjct: 175 QFDDESQVFQEVLNGRAHGALSSSPKPEQETLRHPEAL-FMPFAEPLSQGSEGFALRKGD 233 Query: 235 TEWYNIVSWTHYA 247 + A Sbjct: 234 DALAEQFNEWIAA 246 >gi|49484630|ref|YP_041854.1| extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus MRSA252] gi|257423897|ref|ZP_05600326.1| extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus 55/2053] gi|257426580|ref|ZP_05602982.1| extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus 65-1322] gi|257429216|ref|ZP_05605603.1| extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus 68-397] gi|257431862|ref|ZP_05608225.1| extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus E1410] gi|257434822|ref|ZP_05610873.1| extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus M876] gi|282902329|ref|ZP_06310222.1| amino acid ABC transporter, amino acid-binding protein [Staphylococcus aureus subsp. aureus C160] gi|282906757|ref|ZP_06314605.1| extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus Btn1260] gi|282909733|ref|ZP_06317542.1| extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911979|ref|ZP_06319775.1| extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus WBG10049] gi|282915274|ref|ZP_06323051.1| amino acid ABC transporter, amino acid-binding protein [Staphylococcus aureus subsp. aureus M899] gi|282920998|ref|ZP_06328716.1| polar amino acid transport system substrate-binding protein [Staphylococcus aureus subsp. aureus C427] gi|282925904|ref|ZP_06333552.1| polar amino acid transport system substrate-binding protein [Staphylococcus aureus subsp. aureus C101] gi|283959197|ref|ZP_06376638.1| amino acid ABC transporter, amino acid-binding protein [Staphylococcus aureus subsp. aureus A017934/97] gi|293497670|ref|ZP_06665524.1| polar amino acid transport system substrate-binding protein [Staphylococcus aureus subsp. aureus 58-424] gi|293511250|ref|ZP_06669946.1| polar amino acid transport system substrate-binding protein [Staphylococcus aureus subsp. aureus M809] gi|293549858|ref|ZP_06672530.1| amino acid ABC transporter, amino acid-binding protein [Staphylococcus aureus subsp. aureus M1015] gi|295429001|ref|ZP_06821623.1| polar amino acid transport system substrate-binding protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|297589504|ref|ZP_06948145.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus MN8] gi|49242759|emb|CAG41484.1| extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus MRSA252] gi|257272915|gb|EEV05017.1| extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus 55/2053] gi|257276211|gb|EEV07662.1| extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus 65-1322] gi|257279697|gb|EEV10284.1| extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus 68-397] gi|257282741|gb|EEV12873.1| extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus E1410] gi|257285418|gb|EEV15534.1| extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus M876] gi|282312733|gb|EFB43137.1| polar amino acid transport system substrate-binding protein [Staphylococcus aureus subsp. aureus C101] gi|282315413|gb|EFB45797.1| polar amino acid transport system substrate-binding protein [Staphylococcus aureus subsp. aureus C427] gi|282320995|gb|EFB51329.1| amino acid ABC transporter, amino acid-binding protein [Staphylococcus aureus subsp. aureus M899] gi|282323675|gb|EFB53991.1| extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus WBG10049] gi|282326307|gb|EFB56611.1| extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282329656|gb|EFB59177.1| extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus Btn1260] gi|282596788|gb|EFC01747.1| amino acid ABC transporter, amino acid-binding protein [Staphylococcus aureus subsp. aureus C160] gi|283788789|gb|EFC27616.1| amino acid ABC transporter, amino acid-binding protein [Staphylococcus aureus subsp. aureus A017934/97] gi|290918905|gb|EFD95981.1| amino acid ABC transporter, amino acid-binding protein [Staphylococcus aureus subsp. aureus M1015] gi|291096601|gb|EFE26859.1| polar amino acid transport system substrate-binding protein [Staphylococcus aureus subsp. aureus 58-424] gi|291465876|gb|EFF08406.1| polar amino acid transport system substrate-binding protein [Staphylococcus aureus subsp. aureus M809] gi|295126760|gb|EFG56404.1| polar amino acid transport system substrate-binding protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|297578015|gb|EFH96728.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus MN8] gi|312437164|gb|ADQ76235.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus TCH60] gi|315194907|gb|EFU25295.1| extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus CGS00] Length = 259 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 69/213 (32%), Gaps = 13/213 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + FV I + IL +++ K + G F+ +G G+D Sbjct: 1 MKRLLFVVIAFVFILAACGNNSSKDK-EASKDSKTINVGTEGTYAPFSFHDKDGKLTGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ A + K+++ + F L + + D+++ RE F Sbjct: 60 IDVIKAVAKA---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYK--FSK 114 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F ++ +K I + + G + Q T+ LA A + Sbjct: 115 PYTFSSAVLVIRENEKDIKDFNDVKGKKLA-QTFTSNYGKLAKDKGA-----DITKVDGF 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 + + R D D + K Sbjct: 169 NQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAK 201 >gi|271500846|ref|YP_003333871.1| cationic amino acid ABC transporter periplasmic-binding protein [Dickeya dadantii Ech586] gi|270344401|gb|ACZ77166.1| cationic amino acid ABC transporter, periplasmic binding protein [Dickeya dadantii Ech586] Length = 243 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 74/216 (34%), Gaps = 16/216 (7%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ F V A+ GFD+D AL I + + L+ Sbjct: 22 TIRFATEASYPPFESVDASNQIVGFDIDLANALCKQI---QATCTFSNQAFDSLIPGLKF 78 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 ++ D + D T R ++F Y + FI K ++ ++ L G + VQ GT Sbjct: 79 RRYDAVIAGMDITPER--QQQVSFTQPYYENSALFIAQK-DKLADIAALKGKRVGVQNGT 135 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T + L D K + ++ + + R DA GD + + + P+ Sbjct: 136 THQKYLLDKHK----DITVVPYDSYQNAVLDLKNGRLDAVFGDTAVVNEWL--KENPNLA 189 Query: 215 VILPDIISKSP----LAPAIIQGDTEWYNIVSWTHY 246 + + K L A+ Q + E + Sbjct: 190 SVGTKVTDKDYFGIGLGIAVRQNNDELVKKFNDALN 225 >gi|225620484|ref|YP_002721741.1| family 3 extracellular solute-binding protein [Brachyspira hyodysenteriae WA1] gi|225215303|gb|ACN84037.1| extracellular solute-binding protein, family 3 [Brachyspira hyodysenteriae WA1] Length = 261 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 93/251 (37%), Gaps = 16/251 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+K+ V IL + + F + +++ L G N F + + GFD Sbjct: 12 MFKNNIVKILAALSIVLVLFISC----QKKEEKNKLYVGTNAEFEPFEYREGD-QIVGFD 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + I + I+ + + AL++K+IDI++ T R+ + F Sbjct: 67 MDLIAEAAKLIGKE---IEIVDMQFDGLLPALEAKKIDIIAAGMTATEERKKF--VNFTD 121 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y Q ++H I L G ++ V G T +L +++ + + Sbjct: 122 PYYESKQTILVHSDNKDIYGFDSLEGKNVGVVLGYTGDLIVSEM-----SNVNVQRYSAT 176 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A ++ + DA D N+ + L D +S A A+ + DTE Sbjct: 177 SEAVIALKSQKVDAVVLDSEPAKQYFNQNNDLKLVISLTDEVSSEEYAIAMRKEDTELLA 236 Query: 240 IVSWTHYAMVT 250 ++ + Sbjct: 237 QMNEALKTLKE 247 >gi|86741500|ref|YP_481900.1| extracellular solute-binding protein [Frankia sp. CcI3] gi|86568362|gb|ABD12171.1| amino acid ABC transporter substrate-binding protein, PAAT family [Frankia sp. CcI3] Length = 319 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 52/231 (22%), Positives = 87/231 (37%), Gaps = 21/231 (9%) Query: 31 KKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDP---SKIQYLPLNAK 86 + RG+L+ GI T + +GFDV RA+++AIF +Q+ + Sbjct: 59 RDRGYLRVGIATDAPPAGLMNWRTLRLEGFDVGIARAVAAAIFGAERVDDHVQFRAVTTS 118 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 ER L+S +D+L T R+ + F + Y ++ + G ++ L G Sbjct: 119 EREDLLRSGMVDMLVATMTITCERKRQVR--FSDVYYESTLRLLVRENAGFRGIADLVGR 176 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 +C AG+T+ LA P+ R+ + A + DA GD L L Sbjct: 177 PVCSSAGSTSSEKLARLPA---PGPRPVTRARLADCLVALQHGDVDAIAGDDVLLAGLAA 233 Query: 207 TND-----RPSEHVILPDIISK--SPLAPAII-----QGDTEWYNIVSWTH 245 + PS + + P A+ GD E+ V+ Sbjct: 234 QDPYTTVLGPSAFGADFEAGGRLDEPYGIAMPITGDTAGDDEFVAFVNGVL 284 >gi|325697006|gb|EGD38893.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK160] Length = 287 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 86/246 (34%), Gaps = 9/246 (3%) Query: 2 YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K + S+ + +L + +S ++ ++ G F+ +G G+D Sbjct: 16 KKTLKYFSLAAVSVLAIGALVACSSSSEKKTEKTKVEVGTVGTTKPFSYEDKDGKLTGYD 75 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ RA+ D ++ + F L S + I + N E + + Sbjct: 76 IEVLRAIFK--GSDKYEVNFNKTKWASIFSGLDSDRYQIGANNIS--YSEERANKYLYAS 131 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-- 178 + ++ K +GI S+ + G S V GT+T L DY K H+ I + Sbjct: 132 PYAKNPTVLVVRKGEGIKSLDDIGGKSTEVVQGTSTAQQLEDYNKEHSDNPTKINYTDGT 191 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237 +++I A R D + + + + ++ + P I G + Sbjct: 192 IQQILANLNDGRTDYKVFER-ITVESIIKDQGLNNLEVIELPSDQQPYVYPIIASGQEDL 250 Query: 238 YNIVSW 243 V+ Sbjct: 251 QKFVNK 256 >gi|307154138|ref|YP_003889522.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] gi|306984366|gb|ADN16247.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7822] Length = 297 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 87/242 (35%), Gaps = 13/242 (5%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI---FD 73 F + ++L I++ G L G + F G+W G+ VD + + + F+ Sbjct: 40 FPAQVDAETVLEKIQRTGELNAGARIDAIPFGYKTDKGEWTGYSVDLLKLIQQDLEKKFN 99 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 P K+ + RF A++ ++++I+ T T R + F + G F++ Sbjct: 100 KPIKLNLKEVTIDSRFQAIEKQEVEIVCGATTVTQQR--LEKVDFSLPFFMTGSQFLVKL 157 Query: 134 KKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 + + L SI TTT+ + + + EE + Sbjct: 158 EDAANFDINGTLKDVSIAYIPHTTTDEIIRQIYPFARWQ----PVRNREEGVKKLKQGAV 213 Query: 192 DAYTGDISALYALKLTNDR-PSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 A D L + P + I+P+ ++ A + + + EW V T + Sbjct: 214 TAVVSDGILLVGEIVRQGNEPRDFEIMPNVPMTTELYACILPKNNPEWQEFVDQTISSQN 273 Query: 250 TA 251 A Sbjct: 274 NA 275 >gi|227505906|ref|ZP_03935955.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium striatum ATCC 6940] gi|227197534|gb|EEI77582.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium striatum ATCC 6940] Length = 355 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 88/208 (42%), Gaps = 10/208 (4%) Query: 29 DIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 DI KRG + G++ + A+G+ +GF+VD R ++ IFDDP+K+ + + + E Sbjct: 93 DIYKRGRIIVGVDRSNNLMSYRDTASGEVRGFEVDIAREIARDIFDDPNKVDFRFVESSE 152 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R AL + +DI+ R + R+ + F ++ GI S+ +G + Sbjct: 153 RTSALNERSVDIVIRTMSISAERQREVA--FSAPYMTTKTKLLVLSSSGIRSIDDTAGKT 210 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C G+T + D + + + + A + ++ D D + L + Sbjct: 211 LCAVQGST----IVDTVRREASTSNILQTRSWGDCLMALQLNQIDGVVADDALLSGMLAQ 266 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDT 235 + I+ ++ A+ + D+ Sbjct: 267 DS---YTSIVGAPLTSEDYGVAVRKPDS 291 >gi|294792996|ref|ZP_06758142.1| glutamine ABC transporter, glutamine-binding protein [Veillonella sp. 6_1_27] gi|294455941|gb|EFG24305.1| glutamine ABC transporter, glutamine-binding protein [Veillonella sp. 6_1_27] Length = 274 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 97/326 (29%), Gaps = 67/326 (20%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59 M ++L + + + + + G + F +G GF Sbjct: 14 MKFKKIAALLGAFTIASSLLIAGCG--QEGNSQKAWRVGTDATYAPFGFKDKDSGKLAGF 71 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D A+++ + LN ALQS IDI + + R + F Sbjct: 72 DIDIINAIANEEGIEAD---IQNLNFDALLPALQSNTIDIAISDMTISEERAK--SVDFS 126 Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G G +++ I+S L G I V G+T + A +++ IV Sbjct: 127 KPYYIAGNGLVVNIDNTNINSFKDLEGKRIGVSIGSTGAEIASKIPNADVHQFNIIV--- 183 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + D D + + + +PL A+ +G+TE Sbjct: 184 --DAFLELQNKGVDVVINDTPVNEYYVNGKGKGIA-KVTGEDYDAAPLGIAVKKGNTELL 240 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 N ++ GL K Sbjct: 241 NKIND----------------------------------------------GLAK----- 249 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPR 324 I+ G Y E++ + G + ++ R Sbjct: 250 -IKANGKYAEIYKKWFGKEPPAEVLR 274 >gi|115352500|ref|YP_774339.1| cationic amino acid ABC transporter periplasmic binding protein [Burkholderia ambifaria AMMD] gi|170703755|ref|ZP_02894470.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia ambifaria IOP40-10] gi|115282488|gb|ABI88005.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] gi|170131338|gb|EDS99950.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia ambifaria IOP40-10] Length = 258 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I K ++ + Sbjct: 20 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI---NVKCVWVAQDLDGIIP 76 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149 AL++K+ D++ + T R + F Y I + +V+ L G + Sbjct: 77 ALKAKKYDVIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKAGSPLLPTVASLKGKHVG 134 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E Y++ I ++ +++ A + R DA D L Sbjct: 135 VEQGSTQETYAKAYWEPQG--VTVIPYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 192 Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245 R K P A + + DT+ ++ Sbjct: 193 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKLRINKAL 233 >gi|237732342|ref|ZP_04562823.1| ABC transporter histidine/lysine/arginine/ornithine transporter subunit [Citrobacter sp. 30_2] gi|283832260|ref|ZP_06352001.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Citrobacter youngae ATCC 29220] gi|226907881|gb|EEH93799.1| ABC transporter histidine/lysine/arginine/ornithine transporter subunit [Citrobacter sp. 30_2] gi|291071901|gb|EFE10010.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Citrobacter youngae ATCC 29220] Length = 260 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 89/245 (36%), Gaps = 20/245 (8%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ G + F A G+ GFD+D + L I ++ ++ +L++ Sbjct: 27 KIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153 K+ID + + T R +AF Y ++ K I ++ L G + V G Sbjct: 84 KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKDSAIQPTIESLKGKRVGVLQG 141 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT E +++ + + ++ + I + A R DA D A L + Sbjct: 142 TTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKD 199 Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + + L + + D E ++ +A + A+ +++K Sbjct: 200 YKFGGPSVKDEKLFGVGTGMGLRKDDNELREALNKA-FAEMRAD------GTYEKLAKKY 252 Query: 269 TNPDV 273 + DV Sbjct: 253 FDFDV 257 >gi|116513459|ref|YP_812365.1| amino acid ABC transporter periplasmic protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116092774|gb|ABJ57927.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 270 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 37/258 (14%), Positives = 78/258 (30%), Gaps = 26/258 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-----------GDIKKRGFLKCGINTGLVGFAE 49 M K + L + + S ++ +G L G+ ++ Sbjct: 1 MKKSIKKILSFLAVAGIGASLAACSSSSSSSSSSSSYQSELTSKGTLTIGLEGTYAPYSY 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 +G GF+VD +A++ + +++P L S + D++ N T Sbjct: 61 R-KSGKLTGFEVDLGKAVAKKLGLKA---KFVPTKWDSLIAGLGSSKYDVVLNNITQTPE 116 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ F + I K ++ +SQ+ G GT + Sbjct: 117 RKKV--YNFSDPYIYSRYALITKKSSKVTKLSQIQGKKWAEGTGTNNAALV------KKY 168 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LA 227 K + + R R D A YA ++ + + P ++ Sbjct: 169 KGTIVPSGEFSTSLSLVRQGRVDGTINAAEAWYAY-AKDNNTKDLKMTDLSKQVDPVKVS 227 Query: 228 PAIIQGDTEWYNIVSWTH 245 + +T+ + + Sbjct: 228 ALFNKKNTKLLSKFNKAL 245 >gi|218510513|ref|ZP_03508391.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli Brasil 5] Length = 201 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 75/194 (38%), Gaps = 4/194 (2%) Query: 1 MYKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M F ++ L+ S S L ++ RG L G + + A+ +G Sbjct: 10 MTISFRTGVISLVAAALLSTPVLAEGSKLDEVLARGHLVLGTGSTNAPWHFKSADDKLQG 69 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD ++ A+F DP KI+Y+ ++ R + + ++DI + T R + +AF Sbjct: 70 FDVDMGHIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAF 127 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y +G G ++ + + L A + A + +E Sbjct: 128 TIPYYREGVGLMLKADGKYADYAALKAAGSSATISVLQNVYAETMVHAALPEATVDQYES 187 Query: 179 VEEIDAAYRAHRCD 192 V+ I A + R D Sbjct: 188 VDLIYQALESGRAD 201 >gi|154175519|ref|YP_001409168.1| hook assembly protein [Campylobacter curvus 525.92] gi|153793248|gb|EAT99524.2| hook assembly protein, flagella [Campylobacter curvus 525.92] Length = 250 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 69/246 (28%), Gaps = 20/246 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++L ++ + A + D G L F+ + GFD Sbjct: 1 MK---IANLLKFAVILALGLNLQAKTIKD----GVLTVATEGTYAPFSFYNEKNELTGFD 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RA++ + KI++ + + D + T R+ F Sbjct: 54 VDIARAVAEKL---NLKIEFFATPWDSMLAGFDAGKADAVFNQMSPTDERKK--KYDFSK 108 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ K I + + L G A + A +V + Sbjct: 109 PYTVVYGAIIVRKDDDSIKNFADLKGKKDADSATSNWAQV------AKKYGAEHVVVDSF 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R D D Y I K A A+ +G+ E + Sbjct: 163 AKSMELLFSGRVDCVIRDNIVFYDFIKERPDAPV-KIAATSEEKDYTAAAVQKGNEELVS 221 Query: 240 IVSWTH 245 ++ Sbjct: 222 AINKAL 227 >gi|17546822|ref|NP_520224.1| amino-acid-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17429122|emb|CAD15810.1| probable amino-acid-binding periplasmic (pbp) abc transporter protein [Ralstonia solanacearum GMI1000] Length = 267 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 34/228 (14%), Positives = 74/228 (32%), Gaps = 14/228 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 +A L +I+K G ++ I F + + +G+D+D ++ + + Sbjct: 28 PAHADALANIQKAGVIRVAIPNDFPPFGSLGTDLKLQGYDIDMANLVAKELGVKAELVP- 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + R L + ++D++ + R + F + K I + Sbjct: 87 --VTSTNRIPFLTTGKVDVVISSLGKNAERAKV--IDFTQAYAPFPKSVYGPKDVSIKTP 142 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + L+G +I V G+T +L L A +E +Y + T Sbjct: 143 ADLAGKTIGVTRGSTEDLALTAVAPA---SATIKRYEDNNATAQSYLIGQVQLVTLGNIV 199 Query: 201 LYA--LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 A + + + D P + +G+ V+ Sbjct: 200 ANAVNERTRLRQLDVKFPVEDT----PCYVGVAKGEPALLEKVNAAIT 243 >gi|302188858|ref|ZP_07265531.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. syringae 642] Length = 260 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 86/252 (34%), Gaps = 19/252 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + + K+ L+ G++ F A+G GFD Sbjct: 1 MKKAWLTLSALAL------CIAAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +++ + L++++ D + + T RE + F Sbjct: 53 IDLGNAICKEL---KVTCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IDFSS 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K G + + L G ++ + GT E + + Sbjct: 108 ELFSGPTSLVFKKGAGFTADPASLKGKTVGYEQGTIQEAYAKAVLDKAGVSTK--AYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTE 236 +++ A + R DA D+ L + +++ + + + A I +G+ E Sbjct: 166 DQVYADLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPIDSELLPAKTAIGIAKGNKE 225 Query: 237 WYNIVSWTHYAM 248 ++ AM Sbjct: 226 LKALLDKGIKAM 237 >gi|168178600|ref|ZP_02613264.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum NCTC 2916] gi|226948448|ref|YP_002803539.1| polar amino acid uptake ABC transporter amino acid-binding protein [Clostridium botulinum A2 str. Kyoto] gi|182671327|gb|EDT83301.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum NCTC 2916] gi|226841377|gb|ACO84043.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A2 str. Kyoto] Length = 274 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 77/253 (30%), Gaps = 10/253 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVK-ANGDWKGF 59 +K F+S+ L++ + + A IK+ +K G + F + + +GF Sbjct: 6 FKKIFLSM-SLVVALGVALTACAQKNKQIKENKNTIKIGTSGQYYPFTFIDKDSNKVQGF 64 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D + P + + L + +ID ++ T + F Sbjct: 65 EIDIWEEIGKRTGYKPE---FKVADWTGIMGMLDTGKIDTVANEITVTD--KKKEKYYFS 119 Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFE 177 + G K I S+ L G ++ Q GT ++ DY + + Sbjct: 120 KPYVYSGVQLATKKGNNNIKSLKDLEGKTVATQVGTNYSKSIEDYNNKNKGEDIKTKQYN 179 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + R DA D A + + P ++ + E Sbjct: 180 SFSGMFQDVDLGRVDALIEDKLACLVNIKKSGLNLQLAGEPIEEMENAYPFVKKDENKEK 239 Query: 238 YNIVSWTHYAMVT 250 ++ M Sbjct: 240 IEKINKALDDMKN 252 >gi|149375977|ref|ZP_01893743.1| extracellular solute-binding protein, family 3 [Marinobacter algicola DG893] gi|149359614|gb|EDM48072.1| extracellular solute-binding protein, family 3 [Marinobacter algicola DG893] Length = 252 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 82/247 (33%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59 M + ++ + L + + +A L+ + V F + G+ GF Sbjct: 1 MSTKWLKTVGATLALTVAAGTASAET---------LRVVTDPSFVPFEMMDQETGEMIGF 51 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D++ R ++ + I ++ ALQ+ +DI T RE + F Sbjct: 52 DMEIIREVADRAGFE---IDLNTMDFNGIIPALQTGNVDIAIAGITITEEREEI--VDFS 106 Query: 120 PITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ + + +S L G I + G+T+ L ++ + Sbjct: 107 DPYYDSGLRILVRQDNGKVGEISDLEGVKIGTKIGSTSYDYLMKTLDKNDG---VTPYPG 163 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++ A + DA D + + + + A+ G +EW Sbjct: 164 SSDMYMALMSGAVDAVFYDAP-NVGYFASTRGEGKVKTVGKLYEGQQYGIALKNG-SEWV 221 Query: 239 NIVSWTH 245 + V+ Sbjct: 222 DDVNEAL 228 >gi|300936887|ref|ZP_07151774.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 21-1] gi|300457998|gb|EFK21491.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 21-1] Length = 260 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 96/265 (36%), Gaps = 26/265 (9%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 F ++ A+I +I + G + F + G+ GFD+D + L I Sbjct: 13 AFSSATVAFAAIPQNI------RIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI--- 63 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ ++ +L++K+ID + + T R +AF Y ++ K Sbjct: 64 NTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKN 121 Query: 135 KGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I +V L G + V GTT E +++ + + ++ + I + A R DA Sbjct: 122 SDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDA 179 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAM 248 D A L ++ + L + + D E ++ +A Sbjct: 180 AFQDEVAANEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAE 238 Query: 249 VTAEELGITQKNINQVSKDTTNPDV 273 + A+ +++K + DV Sbjct: 239 MRAD------GTYEKLAKKYFDFDV 257 >gi|299530123|ref|ZP_07043549.1| glutamate-binding protein precursor [Comamonas testosteroni S44] gi|298721780|gb|EFI62711.1| glutamate-binding protein precursor [Comamonas testosteroni S44] Length = 300 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 90/230 (39%), Gaps = 9/230 (3%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRA 66 +++ + + +++ IK+ G L+ G F+ + +G +GFD+ + Sbjct: 36 ALVVQGPVADAATIASSTWASKIKQAGTLRLGSTQTSNLFSLLNEKDGKIRGFDLGLAQL 95 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ I D +K Q+ + + R L + Q+D++ T R ++F Y Sbjct: 96 ITRYILGDAAKYQFTQVTSSTREQVLINNQVDMVFATYSITPARAE--KISFAGPYYTSQ 153 Query: 127 QGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G ++ + S + L G + QAG+T LA Y F+ +E A Sbjct: 154 SGVLVKSNNKTVQSYNDLGGKKVATQAGSTGPAILAQYAPKA----VVQEFQTHQEALDA 209 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 R R DAY D + L L+ + + ++ P + +G Sbjct: 210 LRQGRVDAYVTDYTLLL-NALSLGTSNARLAGAPFGAQDPYGVGLPKGSD 258 >gi|302189136|ref|ZP_07265809.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae 642] Length = 273 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 78/257 (30%), Gaps = 21/257 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I L+ L ++ + L ++K L + F+ + + GFD Sbjct: 1 MNYRALLGI-GLVTLAASTQVLAGATLDRVQKNKELVNVLMESYPPFSFLNDKNELDGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ + ++ + S + DI + + R Sbjct: 60 VDVAKAVAQKLGVK---LRLETPSWDVIAAGHWSGRYDICVCSMTPSKARAEVFNFP-VE 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI------ 174 + I S LSG + + + ++ E L + P+ Sbjct: 116 YYASPAVIVVNATDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIDGAEDKPLQYPFED 175 Query: 175 ----VFERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 ++ R DA + L K D+ + + + + P + Sbjct: 176 VQIAPYDNDNVAFQDLGLGAGKRLDAILTN---LVTAKPRLDQDKRFKLAGESLYEEPNS 232 Query: 228 PAIIQGDTEWYNIVSWT 244 AI + D EW V Sbjct: 233 VAIEKDDPEWDAKVREV 249 >gi|227890364|ref|ZP_04008169.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] gi|227849178|gb|EEJ59264.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] Length = 500 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 40/263 (15%), Positives = 87/263 (33%), Gaps = 26/263 (9%) Query: 1 MYKDFFVSILCLIILFFTSFS--------------TNASILGDIKKRGFLKCGINTGLVG 46 M K S +++FF+ + SIL IKK G L G + Sbjct: 4 MKKTKLFSFFFALLMFFSLGATFIKPAQAANQKQVAEGSILKKIKKSGELVVGTSADYPP 63 Query: 47 FAEV---KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 + G D++ R ++ + + ++ +AL++ ++D++ Sbjct: 64 LEFTTSENGKTKYVGVDIELARDIAKDLGVK---LVIKNMSFDSLLVALETGKVDMVISA 120 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLAD 162 T R+ S+ + + K +S+ L G ++ Q G+ + Sbjct: 121 MTPTPERKQSVAFSKIYYKPSGEYFLVNKKDKDKYTSIQSLKGQTVGAQTGSNQYNLVKS 180 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 K ++ + A ++ + A + + N+ V + Sbjct: 181 QMK----DSKLKGLGKINNLVLALQSGKVSAVVVEE-LIAKAYAENNSGLAAVRSNLKET 235 Query: 223 KSPLAPAIIQGDTEWYNIVSWTH 245 ++ A AI +G + V+ T Sbjct: 236 QAGNAVAIAKGQDDLVAQVNKTI 258 >gi|170756679|ref|YP_001780804.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum B1 str. Okra] gi|169121891|gb|ACA45727.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum B1 str. Okra] Length = 274 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 78/251 (31%), Gaps = 10/251 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVK-ANGDWKGF 59 +K F+S+ L++ + + A +IK+ +K G + F + + +GF Sbjct: 6 FKKIFLSM-SLVVALGVALTACAQKNKEIKENKNTIKIGTSGQYYPFTFIDKDSNKVQGF 64 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D + P + + L + +ID ++ T + F Sbjct: 65 EIDIWEEIGKRTGYKPE---FKVADWTGIMGMLDTGKIDTVANEITVTD--KKKEKYYFS 119 Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFE 177 + G K I S+ L G ++ Q GT ++ DY + + Sbjct: 120 KPYVYSGVQLATKKGNNNIKSLKDLEGKTVATQVGTNYSKSIEDYNNKNKGEDIKTKQYN 179 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + R DA D A + + P ++ + E Sbjct: 180 SFSGMFQDVDLGRVDALIEDKLACLVNIKKSGLNLQLAGEPIEEMENAYPFVKKDENKEK 239 Query: 238 YNIVSWTHYAM 248 ++ M Sbjct: 240 IEKINKALDDM 250 >gi|194442881|ref|YP_002041617.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197249041|ref|YP_002147314.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|200387069|ref|ZP_03213681.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|194401544|gb|ACF61766.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197212744|gb|ACH50141.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|199604167|gb|EDZ02712.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 260 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 90/245 (36%), Gaps = 20/245 (8%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ G + F A G+ GFD+D + L I ++ ++ +L++ Sbjct: 27 KIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153 K+ID + + T R +AF Y ++ K I +++ L G + V G Sbjct: 84 KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTIASLKGKRVGVLQG 141 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT E +++ + + ++ + I + A R DA D A L + Sbjct: 142 TTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKD 199 Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + + L + + D E ++ +A + A+ +++K Sbjct: 200 YKFGGPAVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKY 252 Query: 269 TNPDV 273 + DV Sbjct: 253 FDFDV 257 >gi|154684847|ref|YP_001420008.1| YckK [Bacillus amyloliquefaciens FZB42] gi|154350698|gb|ABS72777.1| YckK [Bacillus amyloliquefaciens FZB42] Length = 265 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 75/260 (28%), Gaps = 23/260 (8%) Query: 1 MYKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M K F + + I + S + + +KK+G L G F Sbjct: 1 MKKALFALFMMVSIAMLAACGNSQDSGSKSKDGDLWASVKKKGVLTVGTEGTYEPFTFHD 60 Query: 52 AN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G+DV+ + ++ + + F L +K+ D+++ T Sbjct: 61 KKTDKLTGYDVEVIQEVAKRLGLKAD---FKETQWDSMFAGLNAKRFDVVANQVGKTG-- 115 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 F + K I+ + + G + Q+ T+ LA A Sbjct: 116 -RENQYDFSDKYTTSNAVVVTKKDSTIAKEADVKGKT-AAQSLTSNYNKLAKEAGAK--- 170 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 E + + + R D D A+ T+ + + + A Sbjct: 171 --IEGVEGMAQSLQLIQQGRADLTYNDKLAVLNYLKTSGNKNVKIAFEAGQPQQTY-FAF 227 Query: 231 IQGDTEWYNIVSWTHYAMVT 250 +G E V+ M Sbjct: 228 RKGSGELVTHVNKALKEMKE 247 >gi|282849177|ref|ZP_06258562.1| putative arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Veillonella parvula ATCC 17745] gi|282580881|gb|EFB86279.1| putative arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Veillonella parvula ATCC 17745] Length = 261 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 97/326 (29%), Gaps = 67/326 (20%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59 M ++L + + + + + G + F +G GF Sbjct: 1 MKFKKIAALLGAFTIASSLLIAGCG--QEGNSQKAWRVGTDATYAPFGFKDKDSGKLAGF 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D A+++ + LN ALQS IDI + + R + F Sbjct: 59 DIDIINAIANEEGIEAD---IQNLNFDALLPALQSNTIDIAISDMTISEERAK--SVDFS 113 Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G G +++ I+S L G I V G+T + A +++ IV Sbjct: 114 KPYYIAGNGLVVNIDNTNINSFKDLEGKRIGVSIGSTGAEIASKIPNADVHQFNIIV--- 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + D D + + + +PL A+ +G+TE Sbjct: 171 --DAFLELQNKGVDVVINDTPVNEYYVNGKGKGIA-KVTGEDYDAAPLGIAVKKGNTELL 227 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 N ++ GL K Sbjct: 228 NKIND----------------------------------------------GLAK----- 236 Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPR 324 I+ G Y E++ + G + ++ R Sbjct: 237 -IKANGKYAEIYKKWFGKEPPAEVLR 261 >gi|330937539|gb|EGH41481.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 219 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 75/222 (33%), Gaps = 16/222 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + + K+ L+ G++ F A+G GFD Sbjct: 1 MKKAWLTLSALAL------CIAAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +++ + L++++ D + + T RE + F Sbjct: 53 IDLGNAICKEL---KVTCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IDFSN 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K G + + L G ++ + GT E + + Sbjct: 108 ELFSGPTSLVFKKGAGFTADPASLKGKTVGYEQGTIQEAYAKAVLDKAGISTK--AYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 +++ + + R DA D+ L + +++ + I Sbjct: 166 DQVYSDLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPID 207 >gi|227112029|ref|ZP_03825685.1| arginine-binding periplasmic protein 2 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 243 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 78/252 (30%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L I T+ ++ + F + A+ + GFD Sbjct: 1 MKKLVLATLLAGIAFSATAA-------------DTIRFASSATYPPFESLDASNEIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + AL+ ++ D + D T R + F Sbjct: 48 MDLAKALCKQM---QATCTFTNQAFDSLIPALKFRRYDAVISGMDITPERSKQVA--FTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K S + + G I ++ GTT + + D + ++ + Sbjct: 103 PYYANSAVVIAQKG-KFSDFAAMKGKRIGMENGTTHQKYMHDKHPE----VQTVSYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + P + + L A+ D Sbjct: 158 NAVLDLKNGRIDGVFGDTAVVNEWI--KASPELATVGEHVTDAEYFGTGLGIAVRPDDKA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLEKLNKALDAI 227 >gi|295093670|emb|CBK82761.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Coprococcus sp. ART55/1] Length = 265 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 86/253 (33%), Gaps = 23/253 (9%) Query: 1 MYKDFFVSILCLIILFFTSF--------STNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K + ++ + L S + S L +K +G L G+ T Sbjct: 1 MKKLLSLLLVAAMGLSLVGCGGSDNGSKSESKSDLEYVKDKGTLVVGV-TDFAPMDYKDE 59 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 +G+W GFD D A + ++ ++ ++ + + L K ID + T E+ Sbjct: 60 SGNWIGFDADMASAFAESLGVKAE---FVEIDWDNKIMELDGKTIDCVWNGMTLTD--EV 114 Query: 113 SLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + +A + Q I+ K +V + + V+AG+ E D KA + Sbjct: 115 TSSMACSDAYCNNAQVVIVPNDKADKYQTVDSIKELTFAVEAGSAGE----DQAKALGLN 170 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 Y + + + A DA D S + A + + + ++ Sbjct: 171 YTAVKAQ--ADALMEVAAGTSDAAIID-SLMAAAMVGEGTGYDKLTYTVGLNSEEYGVGF 227 Query: 231 IQGDTEWYNIVSW 243 + + + Sbjct: 228 RKDSDLVAELNKF 240 >gi|239834992|ref|ZP_04683320.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] gi|239823055|gb|EEQ94624.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] Length = 288 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 91/274 (33%), Gaps = 34/274 (12%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + I+ ++ + +A ++ G F + +G KGFD+D A Sbjct: 31 MGIVAALVAVCGALPAHAE---------EIRMGAEGAYAPFNYLDPSGQLKGFDIDVGNA 81 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + + D + ALQSK+ DI++ + T R ++F Y++ Sbjct: 82 ICEKLKAD---CVWSANEWSGIIPALQSKKFDIMASSMAITESR--MQQVSFSDPYYYNT 136 Query: 127 QGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 F+ K+ G+ + G I Q G+ L +F + ++ +EE Sbjct: 137 MRFVALKELGLKDVTPESAKGKVIGTQTGSIAFDALQRFFPNN----EVKLYPTLEEAFL 192 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEH----VILPDIISKSPLAPAIIQGDTEWYNI 240 R D AL E +L + A + D E Sbjct: 193 DIENGRIDLLLESKFALSDWIKKGADCCEFVGNEFLLDGTLGA---GMAFRKDDVELRTR 249 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 V+ ++ + +++S + D++ Sbjct: 250 VNKALAEII-------RDGSYDKISARYFDFDIR 276 >gi|16765681|ref|NP_461296.1| histidine transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56412749|ref|YP_149824.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|167993041|ref|ZP_02574136.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168229729|ref|ZP_02654787.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168237378|ref|ZP_02662436.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168242478|ref|ZP_02667410.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168261624|ref|ZP_02683597.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465936|ref|ZP_02699806.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168817910|ref|ZP_02829910.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194450048|ref|YP_002046409.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194472399|ref|ZP_03078383.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194734670|ref|YP_002115424.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197263084|ref|ZP_03163158.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197361683|ref|YP_002141319.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243211|ref|YP_002216426.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204929077|ref|ZP_03220220.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205353469|ref|YP_002227270.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857772|ref|YP_002244423.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238912366|ref|ZP_04656203.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|123170|sp|P02910|HISJ_SALTY RecName: Full=Histidine-binding periplasmic protein; Short=HBP; Flags: Precursor gi|47718|emb|CAA24658.1| unnamed protein product [Salmonella enterica subsp. enterica serovar Typhimurium] gi|47731|emb|CAA24659.1| unnamed protein product [Salmonella enterica subsp. enterica serovar Typhimurium] gi|154125|gb|AAA75578.1| J protein [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16420897|gb|AAL21255.1| histidine transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56127006|gb|AAV76512.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194408352|gb|ACF68571.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194458763|gb|EDX47602.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194710172|gb|ACF89393.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631393|gb|EDX49953.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197093159|emb|CAR58603.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197241339|gb|EDY23959.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289687|gb|EDY29050.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197937727|gb|ACH75060.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204321621|gb|EDZ06820.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205273250|emb|CAR38213.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205328806|gb|EDZ15570.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205335763|gb|EDZ22527.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205338344|gb|EDZ25108.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205345077|gb|EDZ31841.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205349622|gb|EDZ36253.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709575|emb|CAR33920.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261247560|emb|CBG25387.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994454|gb|ACY89339.1| histidine transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158912|emb|CBW18425.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913345|dbj|BAJ37319.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320086789|emb|CBY96561.1| Membrane-bound lytic murein transglycosylase F Murein lyase F; Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321222945|gb|EFX48016.1| Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322617099|gb|EFY14005.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617595|gb|EFY14494.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624775|gb|EFY21604.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630325|gb|EFY27095.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634505|gb|EFY31238.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639216|gb|EFY35908.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640079|gb|EFY36746.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645701|gb|EFY42225.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652065|gb|EFY48428.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656237|gb|EFY52534.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659389|gb|EFY55636.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665849|gb|EFY62032.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669912|gb|EFY66053.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673897|gb|EFY69994.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678656|gb|EFY74712.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683549|gb|EFY79563.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687624|gb|EFY83594.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323130685|gb|ADX18115.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323193541|gb|EFZ78746.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198448|gb|EFZ83550.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204560|gb|EFZ89563.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208502|gb|EFZ93441.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213640|gb|EFZ98429.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218325|gb|EGA03035.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222920|gb|EGA07269.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224505|gb|EGA08787.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232320|gb|EGA16423.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235646|gb|EGA19730.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323241194|gb|EGA25230.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244936|gb|EGA28938.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250055|gb|EGA33949.1| histidine ABC transporter substrate-binding protein HisJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253839|gb|EGA37664.1| histidine ABC transporter substrate-binding protein HisJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323254976|gb|EGA38767.1| histidine ABC transporter substrate-binding protein HisJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259837|gb|EGA43469.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264142|gb|EGA47649.1| histidine ABC transporter substrate-binding protein HisJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270840|gb|EGA54278.1| histidine ABC transporter substrate-binding protein HisJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326624178|gb|EGE30523.1| histidine transport protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326628561|gb|EGE34904.1| histidine ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|223500|prf||0809313B protein hisJ Length = 260 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 90/245 (36%), Gaps = 20/245 (8%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ G + F A G+ GFD+D + L I ++ ++ +L++ Sbjct: 27 KIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153 K+ID + + T R +AF Y ++ K I +V+ L G + V G Sbjct: 84 KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVASLKGKRVGVLQG 141 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT E +++ + + ++ + I + A R DA D A L + Sbjct: 142 TTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKD 199 Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + + L + + D E ++ +A + A+ +++K Sbjct: 200 YKFGGPAVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKY 252 Query: 269 TNPDV 273 + DV Sbjct: 253 FDFDV 257 >gi|310658911|ref|YP_003936632.1| amino acid ABC transporter amino acid-binding protein [Clostridium sticklandii DSM 519] gi|308825689|emb|CBH21727.1| amino acid abc transporter, amino acid-binding protein [Clostridium sticklandii] Length = 266 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 97/260 (37%), Gaps = 21/260 (8%) Query: 1 MYKDFF-VSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAE---VKA 52 M K + + L++L F S++A S + IK++G + G + + + Sbjct: 1 MKKKLMGLGVAILMVLSFVGCSSSAEEEKSAVEMIKEKGKIVVGTSADYPPYEFHKEING 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFD+ + ++ + + ++ + + AL K+ID ++ + T R+ Sbjct: 61 VDTYVGFDIAIAQKIAEDMGVE---LEIVDMKFDGLLAALTGKKIDFIAAGMNPTEERKK 117 Query: 113 SLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + F + Y ++ K + + G + VQ GT E F Sbjct: 118 --SVDFSIVYYDAHSTMLVAADKVDMLKAPEDFKGLKVGVQKGTIQEEIADTQFP----D 171 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + ++ + ++ + D + A + S V D+ S+ +A AI Sbjct: 172 SEKVAISKIPNLIMELQSGKIDGIILAE--VVAKSYADANESIAVNNLDLGSEGGVALAI 229 Query: 231 IQGDTEWYNIVSWTHYAMVT 250 + + + ++ T ++ Sbjct: 230 NKNQEDLLSQINSTLETIIE 249 >gi|325063881|gb|ADY67571.1| amino acid ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 279 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 92/251 (36%), Gaps = 11/251 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 V + ++ T A L + K G + GI + + ++G +G+D D Sbjct: 14 IAVGLAAALLPILTPAGAEARTLEEAKSSGKIIIGIQGDNAPWGFINSSGVQEGYDADLA 73 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 R + + K++++PL R +L++ ++D L + T R + + Sbjct: 74 RGFADYLG---LKVEFVPLAVANRIPSLRTGKVDALFASMGMTPERAK--NVQYAQPYAH 128 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + K K I++ L+G ++ + + L K + F+ Sbjct: 129 NVMSVYATKDKKIANFDDLTGMTVGAPKSSPMDTALTAGA---GTKAKILRFDDDAATIQ 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + + +A G+ Y +L ++ + D+++ + A G+ +W ++ Sbjct: 186 AILSGQIEAIGGN--QFYGDRLAAAGGKDYEVKFDLVTL-YNSAATRPGEKDWNEALNAW 242 Query: 245 HYAMVTAEELG 255 EL Sbjct: 243 LDKAKANGELA 253 >gi|323171993|gb|EFZ57637.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli LT-68] Length = 251 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 83/245 (33%), Gaps = 20/245 (8%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ G +T F+ A GD+ GFD+D + + K ++ + +L++ Sbjct: 18 TVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMCKRM---QVKCTWVASDFDALIPSLKA 74 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAG 153 K+ID + + T R +AF Y I K I L G + V G Sbjct: 75 KKIDAIISSLSITDKR--QQEIAFSDKLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQG 132 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T E + +++ + + + + + + A R DA D A L + Sbjct: 133 STQEAYANETWRSKGVD--VVAYANQDLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKD 190 Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + + + D E + EL ++++K Sbjct: 191 FAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKAL------GELRQDGT-YDKMAKKY 243 Query: 269 TNPDV 273 + +V Sbjct: 244 FDFNV 248 >gi|134292118|ref|YP_001115854.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134135275|gb|ABO56389.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia vietnamiensis G4] Length = 262 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 83/251 (33%), Gaps = 19/251 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++IL + L K+ ++ G++ F +G +GFD Sbjct: 1 MKNKTRITILLSAATMAFA------TLASAKEWTTIRIGVDPTYPPFESTATDGSVQGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + +K ++ + LQ+++ D++ + T R + F Sbjct: 55 VDLGNALCAKL---NAKCVWVSSSFDGLIPGLQARKFDVILSSMAATEQR--RQQIDFTD 109 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + I + ++L+G I V+ GT E + + + + Sbjct: 110 RLYRNQTRLIARTGAGLLPDAAKLAGKRIAVEQGTIQETYAREKWAPAK--VEVVPYPSY 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-----LPDIISKSPLAPAIIQGD 234 ++ A R D D L R I + A + + D Sbjct: 168 DQAYADLVTGRIDGVLMDAVQGQLGFLATPRGKGFSFAGGVVFDPRIMGNGDAIGVRKAD 227 Query: 235 TEWYNIVSWTH 245 T+ + ++ Sbjct: 228 TDLRDALNRAI 238 >gi|322387683|ref|ZP_08061292.1| amino acid ABC superfamily ATP binding cassette transporter [Streptococcus infantis ATCC 700779] gi|321141550|gb|EFX37046.1| amino acid ABC superfamily ATP binding cassette transporter [Streptococcus infantis ATCC 700779] Length = 481 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 70/226 (30%), Gaps = 16/226 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L L + A ++ ++ F ++ + G D Sbjct: 1 MKKKILACLLILFPILSLGI-AKADT-----EKTKYVIASDSSFAPFVFQDSSNQYTGID 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + I+ A+QS Q D + T R+ + F Sbjct: 55 MDLIKAIAEDQGFE---IEITNPGFDAAINAVQSGQADGIIAGMSVTDARKET--FDFSD 109 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + + ISS L+G ++ V+ GT ++ L + + K F Sbjct: 110 SYYTANTILGVKESSTISSYEDLNGKTVGVKNGTASQTFLTENQSKYGYK--IKTFSDAA 167 Query: 181 EIDAAYRAHRCDAYTGDISAL---YALKLTNDRPSEHVILPDIISK 223 + + DA D + + P + + Sbjct: 168 SMYDSLNTGSIDAVMDDEPVIKYSISQGQKLKTPIAGTPIGETAFA 213 >gi|320143581|gb|EFW35361.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus MRSA177] Length = 467 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 34/260 (13%), Positives = 86/260 (33%), Gaps = 17/260 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDD 74 T+ + IK+RG L+ G++ V ++ G D+D + ++ + Sbjct: 7 TAHAEQDQTWEKIKERGELRVGLSADYAPMEFEHTVNGKTEYAGVDIDLAKKIAKD---N 63 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K++ + ++ AL++ +IDI+ T R+ + F ++ K Sbjct: 64 NLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERKK--QVDFSDSYMMTKNIMLVKKD 121 Query: 135 --KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 + + + Q GT E + R+ ++ A ++ + + Sbjct: 122 KVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE----NASITSLSRLPDVILALKSGKVE 177 Query: 193 AYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 + A N + +V + + +A + + + + ++ T + Sbjct: 178 GAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA--VPKDSPKLLSQINKTIKEVKDK 235 Query: 252 EELGITQKNINQVSKDTTNP 271 + N D + Sbjct: 236 GLIDKYMTNAANAMNDDSGF 255 >gi|302189022|ref|ZP_07265695.1| lysine-arginine-ornithine-binding periplasmic protein [Pseudomonas syringae pv. syringae 642] Length = 258 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 78/245 (31%), Gaps = 23/245 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L +L F+ LK GI FA +G GFD Sbjct: 1 MKKLMLIGAMALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + K ++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M + S+++L G I VQ GT E + + Sbjct: 106 KYYNSPARLVMKDGTKVSDSLAELKGKKIGVQRGTIHERFAREVLAPQG--VEVTPYGSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 EI A R D D + L L D + + + A+ +GD Sbjct: 164 NEIYLDISAGRLDGTIADATLLQDGFLKTDAGKGYAFVGPSFFDAKYFGDGIGIAVRKGD 223 Query: 235 TEWYN 239 + Sbjct: 224 KANLD 228 >gi|149190470|ref|ZP_01868741.1| putative cyclohexadienyl dehydratase precursor signal peptide protein [Vibrio shilonii AK1] gi|148835724|gb|EDL52690.1| putative cyclohexadienyl dehydratase precursor signal peptide protein [Vibrio shilonii AK1] Length = 258 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 73/245 (29%), Gaps = 14/245 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K I+ L + S L I G L+ G ++GF Sbjct: 1 MKKWILGFIIT--FLSIGQVAAETSRLQKILDSGVLRVGTTGDWNPMTMKDPATNSYRGF 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D L+ + ++Y+ + K + + + D+ + + + R G + Sbjct: 59 DIDVTTELAKDLGVK---VEYVATDWKTLVNGITANKYDM-TGSASLNMSRAKVAGYSQP 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + S + + GT E + D+F IV E Sbjct: 115 YFYLAFVPVVQKKDLEKFSDWADFNKPDVKVAATLGTVQEKMVKDFFPDAQH----IVIE 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A R D L + V + + +P++ + Q D W Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVTKFKQ-LAIVPVKEPRKPTPISMLLPQSDQVW 229 Query: 238 YNIVS 242 N V+ Sbjct: 230 INYVN 234 >gi|253991463|ref|YP_003042819.1| amino acid ABC transporter [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782913|emb|CAQ86078.1| similar to amino acid abc transporter [Photorhabdus asymbiotica] Length = 257 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 69/246 (28%), Gaps = 14/246 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K +L I F S NA S IK G + F +G GFDV Sbjct: 2 KILLTLLLASTIQFGIVHSANAESTFDKIKSTGVFRISTEGAYSPFTYHDTSGALTGFDV 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D R ++ + P ++ L + + D + T R+ F Sbjct: 62 DIGREIARRLNVRP---TFIEGKWDGLIAGLDAGRSDAVINQIAITPERKK--KYDFSIP 116 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I HK I + S L G + T A + + I Sbjct: 117 YITSQAVLITHKDNNSIKTFSDLRGKTSA----HTLTNNFAQIARHNG--AEIIGTNGFS 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + R +A D + K ++ + A + +G++E Sbjct: 171 QEIELVSTGRANATINDNLSYLDYKKHKPNAPVKIVSSHPNTGQ-TAILLRKGESELKAA 229 Query: 241 VSWTHY 246 + Sbjct: 230 IDQAIT 235 >gi|213581359|ref|ZP_03363185.1| glutamine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 201 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 72/211 (34%), Gaps = 19/211 (9%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSLLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K ID+ T R+ + F Sbjct: 53 LWDAIAKELKLDY---TLKPMDFSGIIPALQTKNIDLALAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ I SV L G + V++GT + DY KA+ F ++ Sbjct: 108 YKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 +R DA D + T Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNGQ 194 >gi|187924663|ref|YP_001896305.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] gi|187715857|gb|ACD17081.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 260 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 66/248 (26%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ L S + A L IK G K G F +G GFD Sbjct: 1 MKSIRSILLIALFQAVAVSSAFAADELAQIKSAGVFKIGTEGTYAPFTYHDESGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ ++ + P Q++ L + D + T R+ F Sbjct: 61 VEIGTEIAKRLGVKP---QFVEGKWDGLIAGLDVNRYDAVINEVAVTDARKA--KYDFSD 115 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ I + L G + A I + Sbjct: 116 PYITSHAALIVASNNTTIKNFDDLKGKKSANTLTSNFGKIAAA------HGAEVIPVQGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI--ISKSPLAPAIIQGDTEW 237 E + R DA D + K + D S A I +G+ E Sbjct: 170 NESIDLLTSGRVDATVNDSLSFLDFKKHKPDAKVKIAALDTSADSSDKSAVLIRKGNPEL 229 Query: 238 YNIVSWTH 245 ++ Sbjct: 230 QAAINKAL 237 >gi|28871278|ref|NP_793897.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213970887|ref|ZP_03399010.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|301383763|ref|ZP_07232181.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302059459|ref|ZP_07251000.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato K40] gi|302133661|ref|ZP_07259651.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28854528|gb|AAO57592.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213924410|gb|EEB57982.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gi|330966542|gb|EGH66802.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. actinidiae str. M302091] gi|331015690|gb|EGH95746.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 260 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 86/252 (34%), Gaps = 19/252 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + + K+ L+ G++ F A+G GFD Sbjct: 1 MKKAWLTLSALAL------CIAAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +++ + L++++ D + + T RE + F Sbjct: 53 IDLGNAICKEL---KVTCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IDFSN 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K G + + L G ++ + GT E + + Sbjct: 108 ELFSGPTSLVFKKGAGFTADPASLKGKTVGYEQGTIQEAYAKAVLDKSGVTTK--AYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTE 236 +++ A + R DA D+ L + +++ + + + A I QG+ E Sbjct: 166 DQVYADLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPIDSELLPAKTAIGIAQGNKE 225 Query: 237 WYNIVSWTHYAM 248 ++ AM Sbjct: 226 LKALLDKGIKAM 237 >gi|170696517|ref|ZP_02887641.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170138564|gb|EDT06768.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 274 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 77/233 (33%), Gaps = 11/233 (4%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 L S + +A L +I K G ++ G+ F + + G+D+D + A+ Sbjct: 28 GALSAFSPAAHADALDNIAKTGTVRIGVFMDYPPFGSIGPDMKPMGYDIDVAHLIGRAL- 86 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +K++ + + R L + D+L T RE + F Sbjct: 87 --NAKVELVQVTGDNRMAYLADHKTDMLLS-VGQTPEREKV--IDFSKPYAPYYLAVFGP 141 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K + + + L+G SI V GT +L++ + F+ +A+ + + Sbjct: 142 KALPVKNAADLAGKSISVARGTLEDLSVTKIAP---PSANIKRFDDPNGAISAFISGQVQ 198 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + P+ + SP + + + V T Sbjct: 199 LMVVGNDVGATILAR--HPANDPEQKFSLFSSPDHVGLNKNEPRLKQKVDETI 249 >gi|121608571|ref|YP_996378.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121553211|gb|ABM57360.1| extracellular solute-binding protein, family 3 [Verminephrobacter eiseniae EF01-2] Length = 258 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 82/261 (31%), Gaps = 15/261 (5%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + + + A L +I++ G + F + G Sbjct: 1 MKLFKAVAAIATVTALTLCATSAALARTLDEIRQDGKIVIATEGQFAPFNFFNGS-TLTG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F++D + + I++ L L+ + D++ + + R + F Sbjct: 60 FEMDVAELVVKKMG---LTIEWKALGFDALLTGLRQGRWDLVIASHGISEERAK--AVTF 114 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 ++ G I+ I S L+G + VQ GT+ + F Sbjct: 115 TAP-HYCSGGMIIALDPAIKSAKDLAGKVVAVQTGTSYLENVQKVAAIK----EVKNFPT 169 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + +A + R DA+ D A + P L D++ +A A+ +G+ Sbjct: 170 DNDARSALNSRRVDAWVTDR--FVAKAVAEKNPGAGFQLGDMLFIEQIAAAVSKGNGSLA 227 Query: 239 NIVSWTHYAMVTAEELGITQK 259 + ++ K Sbjct: 228 AAWNKALAEVMADGSYAAVSK 248 >gi|576158|pdb|1HSL|A Chain A, Refined 1.89 Angstroms Structure Of The Histidine-Binding Protein Complexed With Histidine And Its Relationship With Many Other Active Transport(Slash)chemosensory Receptors gi|576160|pdb|1HSL|B Chain B, Refined 1.89 Angstroms Structure Of The Histidine-Binding Protein Complexed With Histidine And Its Relationship With Many Other Active Transport(Slash)chemosensory Receptors gi|999843|pdb|1HPB|P Chain P, The Bacterial Periplasmic Histidine-Binding Protein: Structure(Slash)function Analysis Of The Ligand-Binding Site And Comparison With Related Proteins Length = 238 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 90/245 (36%), Gaps = 20/245 (8%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ G + F A G+ GFD+D + L I ++ ++ +L++ Sbjct: 5 KIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKA 61 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153 K+ID + + T R +AF Y ++ K I +V+ L G + V G Sbjct: 62 KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVASLKGKRVGVLQG 119 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT E +++ + + ++ + I + A R DA D A L + Sbjct: 120 TTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKD 177 Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + + L + + D E ++ +A + A+ +++K Sbjct: 178 YKFGGPAVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKY 230 Query: 269 TNPDV 273 + DV Sbjct: 231 FDFDV 235 >gi|323438846|gb|EGA96583.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus O11] Length = 467 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 34/260 (13%), Positives = 86/260 (33%), Gaps = 17/260 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDD 74 T+ + IK+RG L+ G++ V ++ G D+D + ++ + Sbjct: 7 TAHAEQDQTWEKIKERGELRVGLSADYAPMEFEHTVNGKTEYAGVDIDLAKKIAKD---N 63 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K++ + ++ AL++ +IDI+ T R+ + F ++ K Sbjct: 64 NLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERKK--QVDFSDSYMMTKNIMLVKKD 121 Query: 135 --KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 + + + Q GT E + R+ ++ A ++ + + Sbjct: 122 KVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE----NASITSLSRLPDVILALKSGKVE 177 Query: 193 AYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 + A N + +V + + +A + + + + ++ T + Sbjct: 178 GAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA--VPKDSPKLLSQINKTIKEVKDK 235 Query: 252 EELGITQKNINQVSKDTTNP 271 + N D + Sbjct: 236 GLIDKYMTNAANAMNDDSGF 255 >gi|283786383|ref|YP_003366248.1| histidine ABC transporter, substrate-binding periplasmic protein [Citrobacter rodentium ICC168] gi|282949837|emb|CBG89460.1| histidine ABC transporter, substrate-binding periplasmic protein [Citrobacter rodentium ICC168] Length = 260 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 89/245 (36%), Gaps = 20/245 (8%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ G + F A G+ GFD+D + L I ++ ++ +L++ Sbjct: 27 KLRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFIENPLDALIPSLKA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153 K+ID + + T R +AF Y ++ K I +V L G + V G Sbjct: 84 KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVTKDSDIQPTVESLKGKRVGVLQG 141 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT E +++ + + ++ + I + A R DA D A L + Sbjct: 142 TTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKD 199 Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + + L + + D E ++ +A + A+ +++K Sbjct: 200 YKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKY 252 Query: 269 TNPDV 273 + DV Sbjct: 253 FDFDV 257 >gi|224369136|ref|YP_002603300.1| GlnH2 [Desulfobacterium autotrophicum HRM2] gi|223691853|gb|ACN15136.1| GlnH2 [Desulfobacterium autotrophicum HRM2] Length = 250 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 90/252 (35%), Gaps = 22/252 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F L ++ L TS + + G + + A G + GFD Sbjct: 1 MKQIF--GFLLMLGLCMTSVANAGDT---------IVVGTSADYPPYEFTDATGAFVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D RA+ I ++ + + LQ+K+ID++ + R + F Sbjct: 50 MDLVRAIGDKIGKK---VKIVDMGFDTLIAGLQNKKIDVVIAAMQASDERRK--KVDFSI 104 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNM--KYHPIVF 176 + ++ I SV ++G + Q GT E + D + + Sbjct: 105 TYHDIKDALLVKADSDIQIKSVYDIAGYKVASQTGTIQEKWIQDNLVKTGKLAAENYFSY 164 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ERV+ +A R D I A A+ L + ++ + + A+ +G+T Sbjct: 165 ERVDNAAMDVKAGRVDVL--HIIADPAISLAEKNSLKIALITTETVSAGQSLAVTKGNTA 222 Query: 237 WYNIVSWTHYAM 248 + ++ A+ Sbjct: 223 LLSEINKAIEAL 234 >gi|167585826|ref|ZP_02378214.1| ABC lysine-arginine-ornithine family transporter, periplasmic ligand binding protein [Burkholderia ubonensis Bu] Length = 260 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I K ++ + Sbjct: 22 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI---NVKCVWVAQDLDGIIP 78 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149 AL++K+ D++ + T R + F Y I + +V+ L G + Sbjct: 79 ALKAKKYDVIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKTGSPLLPTVASLKGKRVG 136 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E Y++ I ++ +++ A + R DA D L Sbjct: 137 VEQGSTQETYAKAYWEPQG--VTVIPYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 194 Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245 R K P A + + DT+ ++ Sbjct: 195 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKLKINQAL 235 >gi|187920626|ref|YP_001889658.1| cationic amino acid ABC transporter periplasmic binding protein [Burkholderia phytofirmans PsJN] gi|187719064|gb|ACD20287.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia phytofirmans PsJN] Length = 260 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 80/225 (35%), Gaps = 13/225 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K ++ G++ F ++G GFD+D + + + +K ++ + Sbjct: 23 KDWSTVRFGVDASYPPFESKGSDGKLVGFDIDLGNEICARM---KAKCVWVENDFDGMIP 79 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASIC 149 AL++K+ D + + T R + F + + K GI + L G ++ Sbjct: 80 ALKAKKFDGVLSSMSMTPQRAEQIA--FSNKLFNTPTRLVAKKGSGILPTADSLKGKTVG 137 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ GT E Y++ + ++ +++ A + R DA D L Sbjct: 138 VEQGTIQETYAKTYWEPKG--TKVVPYQNQDQVYADLLSGRLDAALQDAVQAEIGFLKTP 195 Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMV 249 R + + + + + + DT+ V ++ Sbjct: 196 RGAGFDFVGKNLDDPKILGNGAGIGMRKEDTDLKAKVDKAIADII 240 >gi|261885182|ref|ZP_06009221.1| arginine-binding periplasmic protein 1 [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 241 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 84/255 (32%), Gaps = 26/255 (10%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 FF I I S + + ++ G N F + + GFD+D Sbjct: 2 FFKFIGGACIAAGFSHAAD-----------VIRVGTNATYPPFEFIDEHTKIAGFDMDLI 50 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ALS + + + + ++ AL++ +ID ++ T R + P Sbjct: 51 DALSKKVGFEY---KIVNMSFDALIPALKAGKIDAVATAMSATPDRHKASQFYQSPYYNT 107 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + K ++S L G I VQ GT E+ + E + Sbjct: 108 EILFIKQAKNGDLTSKQNLDGKKIAVQLGTVQEIAARAM-----KGVKVMANEDIFAAIM 162 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A + + DA D S Y N +E L + +I + ++V+ Sbjct: 163 ALKNGKVDAVLVDSSIGYGYLNKNKDLAEF--LKEPDGSE--GFSIAFDKNKHTDLVAKI 218 Query: 245 HYAMVTAEELGITQK 259 + A+ EEL Sbjct: 219 NQAV---EELKSDGT 230 >gi|224369394|ref|YP_002603558.1| GlnH3 [Desulfobacterium autotrophicum HRM2] gi|223692111|gb|ACN15394.1| GlnH3 [Desulfobacterium autotrophicum HRM2] Length = 248 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 75/248 (30%), Gaps = 23/248 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M K + ++I F + + + +T F G GF Sbjct: 1 MKKQTAFVLTLMMICCFAATGFAKN----------ITVATDTNFPPFEFKDPKTGHHTGF 50 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ A++ + + P++ LQS Q+D R + F Sbjct: 51 DVELWNAIAQDMGIEYD---LQPMDFNGIIPGLQSGQLDAGIAGITIKPERAKV--VDFS 105 Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ + I+ V L G + + GTT++ L KA ++ Sbjct: 106 DPYYNAGLLLLVKADRTDITKVEDLEGKVVATKLGTTSDDFLKKNAKAK----EIKLYPN 161 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + DA D + + V+ P + +G Sbjct: 162 NDAMFMELMMGGADAVMFDSPVIANYVREVGKDRVKVVGP-LYMGQSYGIGFPKGSP-LV 219 Query: 239 NIVSWTHY 246 + V+ + Sbjct: 220 DKVNKSLK 227 >gi|78059801|ref|YP_366376.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77964351|gb|ABB05732.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 257 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 87/254 (34%), Gaps = 24/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + + K+ ++ G++ F K +G+ GF Sbjct: 1 MKRIMIGLVALAMSATGFA-----------KEWTTIRIGVDPSYPPFEYKKPSGELTGFG 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + +K ++ L++++ D + + T R + F Sbjct: 50 VDLGNEVCRRL---NAKCLWVENAFDGMIPGLKARKFDAILSSMSMTPAR--LKQIDFSN 104 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 T ++ K GI + + L+G +I V G+ E +++ + ++ Sbjct: 105 KTAHAPTFLVVKKGSGIQPTPASLNGKAIGVLQGSMQETYAKAHWE--GGGARILSYQNQ 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI----LPDIISKSP-LAPAIIQGD 234 +++ A R DA + L + ++ L D P I + D Sbjct: 163 DQVYADLTNGRLDAALQNGVQASRGFLNTPQGKDYAFAGGELSDPKIFGPGQGIGIRKDD 222 Query: 235 TEWYNIVSWTHYAM 248 T+ + ++ A+ Sbjct: 223 TDLKDKINTALAAI 236 >gi|270260869|ref|ZP_06189142.1| extracellular solute-binding family 3 protein [Serratia odorifera 4Rx13] gi|270044353|gb|EFA17444.1| extracellular solute-binding family 3 protein [Serratia odorifera 4Rx13] Length = 259 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 83/265 (31%), Gaps = 27/265 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K I +L S + L+ G+ F A+G +GFD+D Sbjct: 2 KSLKTLIAVGCLLAAGSSLAAENT---------LRFGLEALYPPFESKSASGKLEGFDID 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A+ +A K ++ + AL++++ D ++ + T R + F Sbjct: 53 LGNAVCAAA---QLKCSWVETSFDSLIPALKARKFDAINSAMNVTDQR--RQAIDFTDSI 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y I G + L+G + V G+ E ++ + + ++ + Sbjct: 108 YQVPNRLIAKADSGLLPDAKSLAGKHVGVLQGSIQETYAKAHWAPQGVD--VVSYQDQNQ 165 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDTE 236 A R DA + + L + D +S +A + +GD Sbjct: 166 AYLDLTAGRLDATLVMAPSGQSGFLARPDGKGFAFVGDAVSDDKILGEGIAFGLRKGDDA 225 Query: 237 WYN-----IVSWTHYAMVTAEELGI 256 IV VTA Sbjct: 226 LKKKLNDAIVKVKQQGTVTALAKKY 250 >gi|330957730|gb|EGH57990.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 260 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 86/252 (34%), Gaps = 19/252 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + + K+ L+ G++ F A+G GFD Sbjct: 1 MKKAWLTLSALAL------CIAAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +++ + L++++ D + + T RE + F Sbjct: 53 IDLGNAICKEL---KVTCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IDFSN 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K G + + L G S+ + GT E + + Sbjct: 108 ELFSGPTSLVFKKGAGFTADPASLKGKSVGYEQGTIQEAYAKAVLDKAGVTTK--AYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTE 236 +++ A + R DA D+ L + +++ + + + A I +G+ E Sbjct: 166 DQVYADLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPIDSELLPAKTAIGIAKGNKE 225 Query: 237 WYNIVSWTHYAM 248 ++ AM Sbjct: 226 LKALLDKGIKAM 237 >gi|317047526|ref|YP_004115174.1| cationic amino acid ABC transporter periplasmic-binding protein [Pantoea sp. At-9b] gi|316949143|gb|ADU68618.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. At-9b] Length = 243 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 85/250 (34%), Gaps = 25/250 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + + ++ + F + GFD Sbjct: 1 MKKWIVAAALATLAMNAFAAE-------------KIRFASSATYPPFESLDRENQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T + S + F Sbjct: 48 IDLAKALCQQM---KAECTFTNNAFDSLIPSLKFRRYDAVISGMDITA--DRSKQVDFTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K + S SQL G I ++ GTT + L + + ++ + Sbjct: 103 PYYANSAVVIARKGQF-SDFSQLKGKRIGMENGTTHQKYLLEQHPE----VVAVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + TN P + + L A+ +G++E Sbjct: 158 NAILDLKNGRLDGVFGDTAVVNQWLKTNADLAPVGAHVTDASYFGTGLGIAVRKGNSELR 217 Query: 239 NIVSWTHYAM 248 + ++ A+ Sbjct: 218 DQLNGALAAI 227 >gi|242309542|ref|ZP_04808697.1| amino acid-binding protein [Helicobacter pullorum MIT 98-5489] gi|239524113|gb|EEQ63979.1| amino acid-binding protein [Helicobacter pullorum MIT 98-5489] Length = 244 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 88/247 (35%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGF 59 M K+ +L ++++ ++G + G N F + + GF Sbjct: 1 MIKNMMKFLLAILVVALVFGCQKN-------EKGSKVYVGTNAEFAPFEYREGK-NIVGF 52 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + ++ +I+++ + AL+S +ID++ T R+ + + Sbjct: 53 DIDLIKEIAR---ISGFEIEFVDMQFDGLLPALESGKIDLIISGMTATEDRKKFVDFS-S 108 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 P + ++ I S L G + V G T ++ ++ F Sbjct: 109 PYYSTKQAILVYQDEQKIQSFDDLVGRKVGVVLGFTGDILVSKI-----PNIQSQKFNAA 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+ A ++ + +A D K + SE ++ + A A+ +G+ E Sbjct: 164 SEVILALKSKKIEAVVMD---YETAKNYAKQNSELKLVQTDFASEEYAIAMRKGNEELLG 220 Query: 240 IVSWTHY 246 ++ Sbjct: 221 KINQAIK 227 >gi|296119960|ref|ZP_06838514.1| glutamate-binding protein [Corynebacterium ammoniagenes DSM 20306] gi|295967114|gb|EFG80385.1| glutamate-binding protein [Corynebacterium ammoniagenes DSM 20306] Length = 288 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 86/258 (33%), Gaps = 16/258 (6%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + IL L + ++ S +L I + G + G+ G + +G + G +V+ Sbjct: 13 MVILGLSLSACSTSSGEQGLLDTI-ESGNITIGVKFDQPGIGLREGDGSFTGAEVEIANH 71 Query: 67 ----LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +++ P I+Y A +R L++ ++ ++ T + + F Sbjct: 72 VVETIAAENGWTPPNIEYRETPAAQRETLLRNGEVSLIQGGYSITP--DRMEEVDFAGPV 129 Query: 123 YFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Q ++ I S+ L G +C AG+ + + A ++ Sbjct: 130 LLTHQALLVRSDDSAIESLDDLDGKILCSSAGSKPAQRIKEEIPA----VQLQEYDTTSS 185 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL----PDIISKSPLAPAIIQGDTEW 237 A DA T D L D E + + S + +GDT Sbjct: 186 CIEALSQGNVDAMTSDAPILAGFAGQYDGEFEVLDMTKSDGSHFSNEWYGIGLQKGDTAG 245 Query: 238 YNIVSWTHYAMVTAEELG 255 V+ M + +L Sbjct: 246 VEAVNNVLTEMQDSGQLD 263 >gi|241762906|ref|ZP_04760969.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241368081|gb|EER62286.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 278 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 83/243 (34%), Gaps = 11/243 (4%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRA 66 + L L+ + + L IK+RG L G+ F + G++V Sbjct: 12 AGLGLLCAITAPAAHADATLDKIKQRGKLVVGVILSGPPFGTIDPATQRHVGYNVLLAEG 71 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + ++ + + R LQ ++DIL N WT R L P G Sbjct: 72 VAKGLG---VTVETVQVQPSNRVQFLQQGKVDILVANMQWTQERSEILSFVPTPFEEVGG 128 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 K GI + L G +CV G+ LAD AH F E A Sbjct: 129 AAIA-KKGTGIKAWDDLRGEPVCVSQGSNFTKPLADQHGAH-----IKAFRGQPESLLAL 182 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R C A L L + N ++ I+ P + SP + +G+ + + Sbjct: 183 RGGNCTAAVHVSPTLRELVVENPDWKDYEIVSPSDLIPSPSVIWLRKGENDTQAAIDRVV 242 Query: 246 YAM 248 Sbjct: 243 QDW 245 >gi|297571712|ref|YP_003697486.1| amino acid ABC transporter periplasmic protein [Arcanobacterium haemolyticum DSM 20595] gi|296932059|gb|ADH92867.1| extracellular solute-binding protein family 3 [Arcanobacterium haemolyticum DSM 20595] Length = 270 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 34/249 (13%), Positives = 83/249 (33%), Gaps = 16/249 (6%) Query: 2 YKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + ++I L++ ++ + +L K + G ++ +G+ G Sbjct: 5 KRISAIAIATLMLAACSTTTATPAGKLLETTKATKTIAVGTEGTYRPYSYTDESGNLAGI 64 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VD + L+ + D +++ + + + ++ N + R+ F Sbjct: 65 EVDIMKLLAKDLGAD---VKFTVAPWDGLIAGVDAGKYPVVINNLAVSDERKE--KYDFT 119 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 D F + ++S+ L+ Q+ T+ LA K + E Sbjct: 120 VPYTRDVAKFAVRADSPLTSIDDLTTQK-AAQSTTSNLGMLA----KETYKLDIVPVEGF 174 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGDTEW 237 + A R D T S + + P + L D ++P + + +G+ + Sbjct: 175 VQAIDLVSAGRAD--TTLNSLVTFKLYAENNPKSAIRLLDGEVETPGCCSILVKKGEDAF 232 Query: 238 YNIVSWTHY 246 ++ Sbjct: 233 LKELNAAIT 241 >gi|167549641|ref|ZP_02343400.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205325236|gb|EDZ13075.1| putative lysine-arginine-ornithine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 260 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 91/245 (37%), Gaps = 20/245 (8%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ G + F A G+ GFD+D + L I ++ ++ +L++ Sbjct: 27 KIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153 K+ID + + T R +AF Y ++ K I +V+ L+G + V G Sbjct: 84 KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVASLNGKRVGVLQG 141 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT E +++ + + ++ + I + A R DA D A L + Sbjct: 142 TTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKD 199 Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + + L + + D E ++ +A + A+ +++K Sbjct: 200 YKFGGPAVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKY 252 Query: 269 TNPDV 273 + DV Sbjct: 253 FDFDV 257 >gi|157146483|ref|YP_001453803.1| hypothetical protein CKO_02243 [Citrobacter koseri ATCC BAA-895] gi|157083688|gb|ABV13366.1| hypothetical protein CKO_02243 [Citrobacter koseri ATCC BAA-895] Length = 243 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 73/216 (33%), Gaps = 12/216 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G++ F + A+ GFD+D AL + D + AL+ Sbjct: 22 KINFGVSATYPPFESLDASNKIVGFDIDLATALCKQMQAD---CTFTNHAFDSLIPALKF 78 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K+ D + D T R S + F Y + I K + + L G I ++ GT Sbjct: 79 KKYDAVISGMDITPER--SKQVTFTSPYYANSALVIAKKDSY-KTFADLKGKRIGMENGT 135 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PS 212 T + L D + ++ + + R D GD + + TN + + Sbjct: 136 THQKYLQDKHPE----VKTVAYDSYQNAIIDLKNGRIDGVFGDTAVVNEWLKTNPQLGAA 191 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + + L A+ + ++ A+ Sbjct: 192 TEKVTDPQYFGTGLGIAVRPDNKALLEKLNTALAAI 227 >gi|328552022|gb|AEB22514.1| YckK [Bacillus amyloliquefaciens TA208] gi|328910285|gb|AEB61881.1| polar amino acid transport system substrate-binding protein [Bacillus amyloliquefaciens LL3] Length = 265 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 74/260 (28%), Gaps = 23/260 (8%) Query: 1 MYKDFFVSILCLIILFFTSF---------STNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M K + + I + S + + +KK+G L G F Sbjct: 1 MKKALLALFMMVSIAVLAACGNSQDSGSKSKDGDLWASVKKKGVLTVGTEGTYEPFTFHD 60 Query: 52 AN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G+DV+ + ++ + + F L +K+ D+++ T Sbjct: 61 KKTDKLTGYDVEVIQEVAKRLGLKAD---FKETQWDSMFAGLNAKRFDVVANQVGKTG-- 115 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 F + K I+ + + G + Q+ T+ LA A Sbjct: 116 -RENQYDFSDKYTTSNAVVVTKKDSTIAKEADVKGKT-AAQSLTSNYNKLAKEAGAK--- 170 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 E + + + R D D A+ T+ + + + A Sbjct: 171 --IEGVEGMAQSLQLIQQGRADLTYNDKLAVLNYLKTSGNKNVKIAFEAGQPQQTY-FAF 227 Query: 231 IQGDTEWYNIVSWTHYAMVT 250 +G E V+ M Sbjct: 228 RKGSGELVTHVNKALKEMKE 247 >gi|295098052|emb|CBK87142.1| L-arginine-binding protein/L-lysine-binding protein/L-ornithine-binding protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 260 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 94/279 (33%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ ++ +++ + L ++ G + F+ A GD+ GFD Sbjct: 1 MKKTVLALSL---LVGLSAAASSYAALPQ-----TVRIGTDATYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---EVKCTWVGSDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFSE 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E ++ + + ++ Sbjct: 108 KLYAADSRLIAAKGSPIQPTIDSLKGKHVGVLQGSTQEGYANANWREKGVD--VVAYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + A R DA D A L E+ + + + D Sbjct: 166 DLIYSDLAAGRLDAAFQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGIGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 TE EL ++++K + +V Sbjct: 226 TELKAAFDKAFN------ELRKDGT-YDKLAKKYFDFNV 257 >gi|134292338|ref|YP_001116074.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia vietnamiensis G4] gi|134135495|gb|ABO56609.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia vietnamiensis G4] Length = 260 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 87/255 (34%), Gaps = 23/255 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ + + +L ++ + A K ++ G++ F A+G GFD Sbjct: 1 MKK--ILAAVTVALLAVSAGTAYA------KDWSTVRFGVDASYPPFESKGADGKVVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + I +K ++ + AL++++ D + + T RE + F Sbjct: 53 VDLGNEICRRI---AAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPAREEQIA--FSA 107 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K + + L G +I V+ GT E Y+ + ++ Sbjct: 108 KLFNTPTRLVTKKGAGLLPTAESLKGKTIGVEQGTIQETYAKTYWAPKG--VTVVPYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL------APAIIQG 233 +++ A + R + D L R + P + + Sbjct: 166 DQVYADLISGRLNGALQDAVQAEIGFLKTPRGAGFDFAGK-DLDDPKTLGNGAGIGLRKE 224 Query: 234 DTEWYNIVSWTHYAM 248 DT+ + AM Sbjct: 225 DTDLKTKIDGAIAAM 239 >gi|238028316|ref|YP_002912547.1| cationic amino acid ABC transporter periplasmic binding protein [Burkholderia glumae BGR1] gi|237877510|gb|ACR29843.1| Cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia glumae BGR1] Length = 258 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 83/224 (37%), Gaps = 13/224 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F V NGD GFDVD + + + I + ++ + Sbjct: 20 KEWKTVRIGVDASYPPFESVAQNGDIVGFDVDLAKEICTRI---AVRCTWVAQDLDGIIP 76 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149 AL++++ D++ + T R + F Y I + +++ L G + Sbjct: 77 ALKARKFDVIMSSLTVTDKR--REQIDFSDKLYDAPARMIAPAGSPLLPTLASLKGKRVG 134 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E Y++ + ++ +++ A R DA D L Sbjct: 135 VEQGSTQETYAKTYWEPRG--VTIVPYQNQDQVYADLGTGRLDAALQDELQADYGFLRTP 192 Query: 210 RPSEH-VILPDIISKSPLA----PAIIQGDTEWYNIVSWTHYAM 248 R P++ + + + DT+ ++ AM Sbjct: 193 RGKGFAWAGPEVKDPKTIGDGTAIGLRKEDTDLKAKINAALAAM 236 >gi|254226190|ref|ZP_04919785.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio cholerae V51] gi|125621292|gb|EAZ49631.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio cholerae V51] Length = 243 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 83/260 (31%), Gaps = 31/260 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L+ + +K + F + N +GFD Sbjct: 1 MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + AL+ K+ D D T R + F Sbjct: 48 VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ ++ + L G + VQ G+T + L + + + + Sbjct: 103 PYYDNSAAFVSLAG-KVADPAALKGNRVGVQNGSTHQSFLLEQLP----DVVAVPYSSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + + R D+ GD + + + + + ++ + A+ + + Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQ 214 Query: 236 EWYNIVSWTHYAMVTAEELG 255 + ++ A+ E Sbjct: 215 ALLDQLNAALEAVKENGEYA 234 >gi|78060926|ref|YP_370834.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77968811|gb|ABB10190.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 267 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 84/254 (33%), Gaps = 22/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + L SF+ + S ++ GI+ F + +G GFD Sbjct: 1 MNRTAKLLVTALAFAPLVSFAQDTST---------IRWGIDPTYPPFEAKQPDGSLAGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +K ++ AL++++ D++ T R + F Sbjct: 52 IDLRNAICEQL---HAKCVWVEQGFDGMIPALRARKFDVIMSAMTATDER--LKQIDFSN 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + + + L+G I + GTT E + + ++ Sbjct: 107 KLYASPGALVAPAGSKLLPTAESLAGKRIGIDQGTTQEAYAKAEWATKG--VTIVSYQNQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +++ R DA D + L R + ++ + A + +GD Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTPRGKGYAFAGPDVTDVRITGYGVAMGVRKGD 224 Query: 235 TEWYNIVSWTHYAM 248 ++ A+ Sbjct: 225 EAMKKRLNDAIVAI 238 >gi|90410448|ref|ZP_01218464.1| putative ABC-type amino acid transport/signal transduction system [Photobacterium profundum 3TCK] gi|90328689|gb|EAS44973.1| putative ABC-type amino acid transport/signal transduction system [Photobacterium profundum 3TCK] Length = 243 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 53/316 (16%), Positives = 98/316 (31%), Gaps = 73/316 (23%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L S NA+ +IK + F V N +GFD Sbjct: 1 MKKILLASLIGLA-------SANAAAQEEIK------FAMEATYAPFEYVDENNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + AL+ K+ D D T R+ ++F Sbjct: 48 VDLANALCKEM---DAKCSFHNQAFDSLIPALKFKRYDAAISGIDITEARQK--QVSFTN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ + +++ + LSG + VQ G+T + L D + + + Sbjct: 103 PYYDNSAAFV-AIEGKVANQAALSGKRVGVQNGSTHQSYLIDQMA----GVTTVPYASYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + R D+ GD + + + + + ++ + Sbjct: 158 DAFIDMQNGRIDSVFGDTAVVAEWF--KKNDTLTYVGDQVTNQEYFG-------NGFGIA 208 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300 V+ E + Q N + + Sbjct: 209 VNKK-------NEELVNQLNA----------------------------------ALKTV 227 Query: 301 RHMGNYGEMFDRNLGN 316 + G Y E+FD+ G Sbjct: 228 KANGQYQEIFDKYFGK 243 >gi|254249604|ref|ZP_04942924.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] gi|124876105|gb|EAY66095.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] Length = 267 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 87/254 (34%), Gaps = 22/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + L SF+ + S ++ GI+ F + +G GFD Sbjct: 1 MNRTAKLLVTALAFAPLASFAQDTST---------IRWGIDPTYPPFEAKQPDGSLAGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +K ++ AL++++ D++ T R + F Sbjct: 52 IDLRNAICEQL---HAKCVWVEQGFDGMIPALRARKFDVIMSAMTATDER--LKQIDFSN 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + + S + L+G I + GTT E + + ++ Sbjct: 107 KLYASPGALVAPVGSKLLPSAASLAGKRIGIDQGTTQEAYAKAEWATKG--VTIVSYQNQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +++ R DA D + L R + ++ + + A I +GD Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTPRGKGYAFAGPDVTDARITGYGVAMGIRKGD 224 Query: 235 TEWYNIVSWTHYAM 248 + ++ A+ Sbjct: 225 ADMKKRLNDAIVAI 238 >gi|167034163|ref|YP_001669394.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166860651|gb|ABY99058.1| extracellular solute-binding protein family 3 [Pseudomonas putida GB-1] Length = 279 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 87/239 (36%), Gaps = 11/239 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFD 60 + S+L + + + + L +++R L G+ F + + GF Sbjct: 8 RRGLLASLLATTTVAASGLAQADATLDKVQQRHKLAVGVVLSGGPFGAIDPATREPIGFS 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD R L+ + + + + R LQ ++D+L N +WT R+ LG P Sbjct: 68 VDLARDLARQLG---VAVDLVAVQPANRVQFLQQGKVDLLIANMEWTPERDKLLGHVPTP 124 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G + K I++ + L G +C G++ L + + F+ Sbjct: 125 FYRVGGTAAL-AKDSPINTWAGLKGQPVCTSQGSSYTQALVE------LGADIKAFKTSA 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A R + C A D + + L S + L ++ +P G+T+ Sbjct: 178 ESLLALRGNNCVAAVHDATLINPLLAKGGEWSGYRALAPELNPAPSVIWTRLGETDTQQ 236 >gi|26990304|ref|NP_745729.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas putida KT2440] gi|24985257|gb|AAN69193.1|AE016553_8 amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas putida KT2440] Length = 250 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 72/213 (33%), Gaps = 8/213 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ F V A+ GFDVD AL + + + + + AL + Sbjct: 23 TLRFATEGAYPPFNYVDADNKLHGFDVDITHALCEQMKVE---CTLVAQDWEGIIPALMA 79 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS-QLSGASICVQAG 153 ++ D + + T R +AF Y + K I S G ++ Q+ Sbjct: 80 RKYDAIVASMIDTEERRK--KIAFTDHYYRTPLTVAVAKDSKIDSAQTDFVGYTVGAQSS 137 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T + D + ++ ++E +A A R D D L+ N Sbjct: 138 STQAIYAEDVYGKAGAD--VKLYPTMDEANADLAAGRLDGVIADKFPLHEWMNKNGGDCC 195 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 ++ +K+ A A+ + D ++ Sbjct: 196 KILGDVADTKADAAIAVRKDDEALRQRLNTALQ 228 >gi|218548236|ref|YP_002382027.1| histidine/lysine/arginine/ornithine ABC transporter periplasmic-binding protein [Escherichia fergusonii ATCC 35469] gi|331658392|ref|ZP_08359354.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli TA206] gi|218355777|emb|CAQ88390.1| histidine/lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|315298158|gb|EFU57422.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 16-3] gi|331056640|gb|EGI28649.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli TA206] Length = 260 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 96/265 (36%), Gaps = 26/265 (9%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 F + + A+I +I + G + F + G+ GFD+D + L I Sbjct: 13 AFSSVTAAFAAIPQNI------RIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI--- 63 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ ++ +L++K+ID + + T R +AF Y ++ K Sbjct: 64 NTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKN 121 Query: 135 KGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I +V L G + V GTT E +++ + + ++ + I + A R DA Sbjct: 122 SDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDA 179 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAM 248 D A L ++ + L + + D E ++ +A Sbjct: 180 AFQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAE 238 Query: 249 VTAEELGITQKNINQVSKDTTNPDV 273 + A+ +++K + DV Sbjct: 239 MRAD------GTYEKLAKKYFDFDV 257 >gi|242279195|ref|YP_002991324.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] gi|242122089|gb|ACS79785.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] Length = 247 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 32/251 (12%), Positives = 73/251 (29%), Gaps = 24/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +L ++ + + + V + GF Sbjct: 1 MKRIIVALLLTILAATPALAG-----------KKVINIASDCTWPPMEFVNKDKQIVGFS 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A + A + + + F L + + D + + R+ + F Sbjct: 50 VDLMKACAKAAGYE---VTIKNVAWDGIFAGLAAGKYDAICSSVSINEKRKKVM--DFAE 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q + K +++ G ++ Q GTT + P ++ + Sbjct: 105 PYFEVQQSVVTAKDSTAKTLADFKGMNVGAQIGTTGYFAI-----KGAEGVVPKSYDEIG 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLT---NDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R A D L + + + L A+ +G+TE Sbjct: 160 LAMEDLYNGRLAAVVCDDPIAADFALQQEEYSKKLKIAFIVKSDKAEYLGVAVKKGNTEV 219 Query: 238 YNIVSWTHYAM 248 ++++ A+ Sbjct: 220 LDLINKGLAAV 230 >gi|145221824|ref|YP_001132502.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium gilvum PYR-GCK] gi|145214310|gb|ABP43714.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Mycobacterium gilvum PYR-GCK] Length = 503 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 70/218 (32%), Gaps = 15/218 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS 76 T+ ++ +K G L+ G F+ G G+DVD RA+ + + Sbjct: 36 TACGSSGPG-NSVKDSGVLRVGTEGVYAPFSFHDPATGQLTGYDVDVARAVGEKLGVN-- 92 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 ++++ F AL++ + D+++ T R + Sbjct: 93 -VEFVETPWDSIFAALEANRFDVVANQVTITPER--QQKYDLSEPYSIGEGVIVTRADDD 149 Query: 137 -ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+S+ L G Q+ T+ +A A E + + A R D Sbjct: 150 SITSLDDLRGRR-AAQSTTSNWAQVARDAGA-----QIESVEGLTQAMALLSQGRVDVVV 203 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 D ++YA + I KS A + Sbjct: 204 NDSLSIYAYLAETGD-TAVKIAGTTGEKSEQGFAARKN 240 >gi|325125095|gb|ADY84425.1| amino acid ABC transporter, substrate binding protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 270 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 37/258 (14%), Positives = 77/258 (29%), Gaps = 26/258 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-----------GDIKKRGFLKCGINTGLVGFAE 49 M K + L + + S ++ +G L G+ ++ Sbjct: 1 MKKSIKKILSFLAVAGIGASLAACSSSSSSSSSSSSYQSELTSKGTLTIGLEGTYAPYSY 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 +G GF+VD +A++ + +++P L S + D++ N T Sbjct: 61 R-KSGKLTGFEVDLGKAVAKKLGLKA---KFVPTKWDSLIAGLGSSKYDVVLNNITQTPE 116 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R+ F + I K ++ +SQ+ G GT + Sbjct: 117 RKKV--YNFSDPYIYSRYALITKKSSKVTKLSQIQGKKWAEGTGTNNAALV------KKY 168 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LA 227 K + + R R D A YA ++ + + P ++ Sbjct: 169 KGTIVPSGEFSTSLSLVRQGRVDGTINAAEAWYAY-AKDNNTKDLKMTDLSKQVDPVKVS 227 Query: 228 PAIIQGDTEWYNIVSWTH 245 + +T+ + Sbjct: 228 ALFNKKNTKLLAKFNKAL 245 >gi|240127767|ref|ZP_04740428.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria gonorrhoeae SK-93-1035] Length = 274 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L + + S++ I +G + G Sbjct: 1 MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAISGSLIERINNKGTVTVGTEGTYAP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 61 FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + I S++ + G + KA Sbjct: 118 T-SPERQATFDKSEPYSWSGAVLVARNDSNIKSIADIKGVKTAQSLTSNYGE------KA 170 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 171 KAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214 >gi|225163801|ref|ZP_03726099.1| extracellular solute-binding protein [Opitutaceae bacterium TAV2] gi|224801594|gb|EEG19892.1| extracellular solute-binding protein [Opitutaceae bacterium TAV2] Length = 265 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 81/230 (35%), Gaps = 9/230 (3%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 D K L G N F V+ GFDVD ++ A + ++ Sbjct: 26 QDAKSSKILTVGTNPEFPPFELVEKGTNKIIGFDVDLITEVAKAAG--YAGVKMEAFAFD 83 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSG 145 AL K++D++ T R+ + F Y Q + K K IS++ + Sbjct: 84 TLGEALNQKKVDVVIAGMTITDERKA--KVLFTDPYYNAAQVLVVTKKNKTISTLDDIKD 141 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + VQ GTT + +N F + E+ + R D D+ Sbjct: 142 KRVGVQLGTTGGVVAEKALGQNNPNMK--QFRKYTEVFYELKLGRVDVVVVDMPV-AQAY 198 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L S+ I +S+ AI + +TE + ++ ++ + +L Sbjct: 199 LKLKNFSDLKISSKPMSEEEFGIAIAKDNTELHKQLNAGLKSVRESGKLD 248 >gi|221211585|ref|ZP_03584564.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia multivorans CGD1] gi|221168946|gb|EEE01414.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia multivorans CGD1] Length = 353 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 78/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I ++ + Sbjct: 115 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRIGVK---CVWVAQDLDGIIP 171 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149 AL++K+ DI+ + T R + F Y I + +V+ L G + Sbjct: 172 ALKAKKYDIIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKAGSPLQPTVASLKGKRVG 229 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E Y++ I ++ +++ A + R DA D L Sbjct: 230 VEQGSTQETYAKTYWEPQG--VTIIPYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 287 Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245 R K P A + + DT+ ++ Sbjct: 288 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKIRINKAL 328 >gi|291522806|emb|CBK81099.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Coprococcus catus GD/7] Length = 265 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 83/241 (34%), Gaps = 10/241 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K V + LII + + + + G + F+ + ANG+ G Sbjct: 1 MKKLSIVIVFGLIISILCGCGADKENKQESLGDLPTVTVGYD-NYSPFSFMDANGNMTGI 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ R S + P ++ +N +++ L ID + + T + + Sbjct: 60 DVELAREAFSRMGYAPE---FVFINWEDKKNLLVKGSIDCIWSSFTMT---DREDEYHWA 113 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Q +++ I ++ L G + VQ+ T E + + I ++ Sbjct: 114 GPYMRSHQVVAVNEDSDIQTLEDLEGKVMAVQSTTKPEDIIRSHDGTLPELRKVISVQKR 173 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + I DA ++ + D + IL + + L A + DT N Sbjct: 174 DLIFILLSKGYVDALAAHDTS--VDQFMEDSGLKFRILEEPLQTVDLGVAFDKADTRGLN 231 Query: 240 I 240 I Sbjct: 232 I 232 >gi|218705839|ref|YP_002413358.1| histidine/lysine/arginine/ornithine ABC transporter periplasmic-binding protein [Escherichia coli UMN026] gi|293405775|ref|ZP_06649767.1| histidine ABC transporter [Escherichia coli FVEC1412] gi|293410666|ref|ZP_06654242.1| histidine ABC transporter [Escherichia coli B354] gi|298381458|ref|ZP_06991057.1| histidine ABC transporter [Escherichia coli FVEC1302] gi|300896991|ref|ZP_07115470.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 198-1] gi|331663825|ref|ZP_08364735.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli TA143] gi|218432936|emb|CAR13830.1| histidine/lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli UMN026] gi|291427983|gb|EFF01010.1| histidine ABC transporter [Escherichia coli FVEC1412] gi|291471134|gb|EFF13618.1| histidine ABC transporter [Escherichia coli B354] gi|298278900|gb|EFI20414.1| histidine ABC transporter [Escherichia coli FVEC1302] gi|300359172|gb|EFJ75042.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 198-1] gi|331059624|gb|EGI31601.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli TA143] Length = 260 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 96/265 (36%), Gaps = 26/265 (9%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 F ++ A+I +I + G + F + G+ GFD+D + L I Sbjct: 13 AFSSATVAFAAIPQNI------RIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI--- 63 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ ++ +L++K+ID + + T R +AF Y ++ K Sbjct: 64 NTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKN 121 Query: 135 KGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I +V L G + V GTT E +++ + + ++ + I + A R DA Sbjct: 122 SDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDA 179 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAM 248 D A L ++ + L + + D E ++ +A Sbjct: 180 AFQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAE 238 Query: 249 VTAEELGITQKNINQVSKDTTNPDV 273 + A+ +++K + DV Sbjct: 239 MRAD------GTYEKLAKKYFDFDV 257 >gi|168184266|ref|ZP_02618930.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum Bf] gi|237794765|ref|YP_002862317.1| polar amino acid uptake ABC transporter amino acid-binding protein [Clostridium botulinum Ba4 str. 657] gi|182672666|gb|EDT84627.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum Bf] gi|229263262|gb|ACQ54295.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum Ba4 str. 657] Length = 268 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 81/266 (30%), Gaps = 20/266 (7%) Query: 1 MYKDFFVSIL----CLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEV 50 M K +S+L C+I S IK +G L G+ F Sbjct: 1 MSKKKILSVLFIVVCIISFTLVGCGQKNSSNGKDSSYSKIKDKGQLVVGLCAQYPPFESR 60 Query: 51 KAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 G+ +GFDVD + L + K++ + + D+L Sbjct: 61 NDKTGEIEGFDVDLAKELGKEM---DLKVEIKDAEWEALLGGVNKGDYDVLITCMSKKEA 117 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 E ++ + D + I + L + VQ T++E + + Sbjct: 118 AEANINTSDTY-YKLDDIIVVNKNNNSIYNKDDLKEKVVGVQTSTSSEQVV----DKLDG 172 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + R E + +R DA A A + + + I+ + S + Sbjct: 173 IKEIKRYNRNPEALIDLKNNRIDAVVVG-YAYAATAMKDKKDDNLKIINSPVGSSDIVMV 231 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255 +G + ++ + + + Sbjct: 232 TKKGSDDLTKELNKALKKVKESGKYE 257 >gi|119946083|ref|YP_943763.1| glutamine ABC transporter extracellular solute-binding family 3 protein [Psychromonas ingrahamii 37] gi|119864687|gb|ABM04164.1| ABC glutamine transporter extracellular solute-binding protein, family 3 [Psychromonas ingrahamii 37] Length = 263 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 77/210 (36%), Gaps = 9/210 (4%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M ++ ++L FT S A+ L IKK G L+ + F V + +G+ Sbjct: 1 MKLCKVLGNVFTSLLLVFTIHSAQANQLESIKKAGVLRVAVPQDFPPFGSVGTDFKPQGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D L+ + + ++ + + + R LQ++++D++ + RE + F Sbjct: 61 DIDMAAYLADELNVE---LELVAVTSANRIPYLQTRKVDLVISSLGKNPEREAV--IDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G + +SS + L ++ V G+ +L L + +E Sbjct: 116 SAYAPFFLGVFGTDNEMVSSPADLKNKTVGVTRGSVEDLELTKLVSS---TTTLQRYEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTND 209 +A+ + + + + Sbjct: 173 NATLSAFLSSQVSLIATGNLVIAEIATRFP 202 >gi|91786949|ref|YP_547901.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91696174|gb|ABE43003.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 286 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 66/211 (31%), Gaps = 7/211 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 G + F G+ GFD+D +A++ + ++++ + F +L Sbjct: 51 VYVVGTDAAYAPFESQNEKGEIVGFDIDVVKAVAQKAGIE---VKFINTPWEGIFNSLNQ 107 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 D+L T R + F + Q + K I+ S L + VQ GT Sbjct: 108 GDRDLLVSAITITPER--KQTMDFSSPYFDAQQLIAVKKDSKIADFSHLKKLKVAVQNGT 165 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T + + + FE A DA D + N Sbjct: 166 TGDEVVTKLQGKA--SPNIKRFESTLLALKELEAGGVDAVVADNGVVVHYVNNNVGAKFK 223 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 I + A+ +G+TE ++ Sbjct: 224 TISDASFAAEQYGLAVKKGNTELLEKLNKGL 254 >gi|327394434|dbj|BAK11856.1| lysine-arginine-ornithine-binding periplasmic protein precursor ArgT [Pantoea ananatis AJ13355] Length = 265 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 82/234 (35%), Gaps = 21/234 (8%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 +F A I++ ++ ++ F G GFD+D AL + + + Sbjct: 21 GCAFGAQA----KIEQ---VRFAVDPTYPPFESKTPQGKLVGFDIDLGNALCAQM---QA 70 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K ++ AL++++ D + + T R + F Y I K Sbjct: 71 KCVWVESQFDGMIPALKARKFDAILSDMGITEER--LKQIDFTQPLYDTHAQLIARKGSA 128 Query: 137 -ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + + L G ++ V+ GT E ++ H + + ++++ A R DA Sbjct: 129 LLPTPESLKGKTVGVEQGTVQERYARAKWQPHG--VTVVPYGDQAQVESDLVAGRLDAVF 186 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244 D + L + + L I + P+ A + +GD E + Sbjct: 187 TDAAQAANGFLKQPQGKDF-ALAGPIVQDPIIGPGTAIGLRKGDAELKTALDTA 239 >gi|308065945|ref|NP_463215.2| arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] Length = 239 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 86/251 (34%), Gaps = 26/251 (10%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + L L + S +A L G + + V A+ GFD+D A+ Sbjct: 1 MLLASLSVHAASVSART---------LHFGTSATYAPYEFVDADNKIVGFDIDVANAVCK 51 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + ++ + + +L+ K+ D + D T RE ++F Y Sbjct: 52 EM---QAECSFTNQSFDSLIPSLRFKKFDAVIAGMDMTPKRE--QQVSFSQPYYEGLSAV 106 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ +K + + L G + ++ GTT + L D P+ ++ + + Sbjct: 107 VVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYLNAFTDLKNN 162 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244 R + GD + A+ ++ I+ + S A+ + + ++ Sbjct: 163 RLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKDNDALLQEINAA 219 Query: 245 HYAMVTAEELG 255 + + E Sbjct: 220 LDKVKASPEYA 230 >gi|323496725|ref|ZP_08101770.1| lysine-arginine-ornithine-binding periplasmic protein [Vibrio sinaloensis DSM 21326] gi|323318150|gb|EGA71116.1| lysine-arginine-ornithine-binding periplasmic protein [Vibrio sinaloensis DSM 21326] Length = 260 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 81/254 (31%), Gaps = 25/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K I C L TS N ++ + F + A+G GFD Sbjct: 1 MKK-LLTIIACASTLISTSALANKP----------VRLASDFTYPPFNYMDADGKPAGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ AL ++ + +L +++ D++ + T R+ + F Sbjct: 50 IEIADALCKEA---KLTCTWVSQSWDSLIPSLMARKSDVIMASMRITEERK--QRVLFTD 104 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y F+ K + + S L G I VQ GT + + D F + Sbjct: 105 KYYQTPARFVAAKSEPVSISKQGLKGKVIGVQTGTIHDRYVTDMF---GDVAEIKRYNGQ 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +E+ + R D G+ L L + + ++ A A+ + D Sbjct: 162 DEVYIDMQNGRLDVTFGNSDQLSLAFLDKEIGKGFEFVGQAVTDKAYIGEGTALAMRKND 221 Query: 235 TEWYNIVSWTHYAM 248 + A+ Sbjct: 222 EALAGKFNQAIKAI 235 >gi|315446439|ref|YP_004079318.1| amino acid ABC transporter membrane protein, PAAT family ;amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] gi|315264742|gb|ADU01484.1| amino acid ABC transporter membrane protein, PAAT family ;amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] Length = 487 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 70/218 (32%), Gaps = 15/218 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS 76 T+ ++ +K G L+ G F+ G G+DVD RA+ + + Sbjct: 20 TACGSSGPG-NSVKDSGVLRVGTEGVYAPFSFHDPATGQLTGYDVDVARAVGEKLGVN-- 76 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 ++++ F AL++ + D+++ T R + Sbjct: 77 -VEFVETPWDSIFAALEANRFDVVANQVTITPER--QQKYDLSEPYSIGEGVIVTRADDD 133 Query: 137 -ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I+S+ L G Q+ T+ +A A E + + A R D Sbjct: 134 SITSLDDLRGRR-AAQSTTSNWAQVARDAGA-----QIESVEGLTQAMALLSQGRVDVVV 187 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 D ++YA + I KS A + Sbjct: 188 NDSLSIYAYLAETGD-TAVKIAGTTGEKSEQGFAARKN 224 >gi|296161318|ref|ZP_06844126.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. Ch1-1] gi|295888476|gb|EFG68286.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. Ch1-1] Length = 260 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 80/225 (35%), Gaps = 13/225 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K ++ G++ F ++G GFD+D + + + +K ++ + Sbjct: 23 KDWSTIRFGVDASYPPFESKGSDGKLVGFDIDLGNEICARL---KAKCVWVENDFDGMIP 79 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASIC 149 AL++K+ D + + T R + F + + K GI + L G ++ Sbjct: 80 ALKAKKFDGVLSSMSMTPQRAEQIA--FSSKLFNTPTRLVAKKGSGILPTADSLKGKTVG 137 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ GT E Y++ + ++ +++ A + R DA D L Sbjct: 138 VEQGTIQETYAKTYWEPKG--AKVVPYQNQDQVYADLLSGRLDAALQDAVQAEIGFLKTP 195 Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMV 249 R + + + + + + DT+ V ++ Sbjct: 196 RGAGFDFVGKDLEDPKILGNGAGIGMRKEDTDLKTKVDKAIAEII 240 >gi|295096443|emb|CBK85533.1| L-arginine-binding protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 243 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 69/218 (31%), Gaps = 16/218 (7%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G++ F + A+ GFD+D +AL + D + +L+ Sbjct: 22 KINFGVSATYPPFESLDASNQIVGFDIDLAKALCKQMQAD---CTFTNHAFDSLIPSLKF 78 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K+ D + D T R + F Y + I K S +L G I ++ GT Sbjct: 79 KKYDAVISGMDITPERSKQVA--FTDPYYANSAVVIAKKG-AYKSFDELKGKRIGMENGT 135 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T + L D + ++ + + R D GD + + P Sbjct: 136 THQKYLQDKHPE----VKTVAYDSYQNAIIDLKNGRIDGVFGDTAVVNEWL--KTNPQLG 189 Query: 215 VILPDIISKSP----LAPAIIQGDTEWYNIVSWTHYAM 248 + L A+ + ++ A+ Sbjct: 190 TATEKVTDPQYFGTGLGIAVRPDNKALLEKLNGALKAI 227 >gi|258620248|ref|ZP_05715287.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio mimicus VM573] gi|258587606|gb|EEW12316.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio mimicus VM573] Length = 243 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 84/260 (32%), Gaps = 31/260 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L+ + +K + F + N +GFD Sbjct: 1 MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + AL+ K+ D D T R ++F Sbjct: 48 VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVSFSN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ I+ + L G + VQ G+T + L + + + + Sbjct: 103 PYYDNSAAFVSLAG-KIADQAALKGKRVGVQNGSTHQSFLLEQLP----NVVAVPYSSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + + R D+ GD + + + + + ++ + A+ + + Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLTYVGERVTNAQYFGNGFGIAVNKDNQ 214 Query: 236 EWYNIVSWTHYAMVTAEELG 255 + ++ A+ E Sbjct: 215 ALVDQLNAALEAVKENGEYA 234 >gi|317491046|ref|ZP_07949482.1| extracellular solute-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920593|gb|EFV41916.1| extracellular solute-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 256 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 35/246 (14%), Positives = 76/246 (30%), Gaps = 16/246 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ + G F + +GFD Sbjct: 1 MLKKMILAGCFAAAMVSGMTMAAQQTY---------VVGSGGTYRPFEFENSQKQLEGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ A D I+ + + F L S DI+ T R+ + F Sbjct: 52 IDIIKAIAKAENFD---IKLVNTPWEGIFATLSSGDRDIIISGITITDKRQKM--VDFST 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q ++ + SV+ L G + V +T ++ ++D + F+ Sbjct: 107 PYFPAEQSIVVPSGSKVDSVNALKGQKVGVVNSSTGDIVVSDVLGKN--STDIKRFDNTP 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A GD+ + + + ++ + A+ +G+ E Sbjct: 165 LMLQELYEDGLGAAVGDVGVVKYYIKNHPEKAFKLVPDSKFERQYFGIAVAKGNQELLGK 224 Query: 241 VSWTHY 246 ++ Sbjct: 225 INAGLQ 230 >gi|225405627|ref|ZP_03760816.1| hypothetical protein CLOSTASPAR_04848 [Clostridium asparagiforme DSM 15981] gi|225042847|gb|EEG53093.1| hypothetical protein CLOSTASPAR_04848 [Clostridium asparagiforme DSM 15981] Length = 287 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 78/237 (32%), Gaps = 12/237 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + + A G L N + G+ G D D RA++ + ++ Sbjct: 53 TTAEAAGEEETKAAGGKLIMVTNAEFPPYEYH-EGGEIVGIDADIARAIADELG---MEL 108 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + L S + D R+ + F Q I+ I+ Sbjct: 109 EIEDIAFDSIIPELTSGKADFAMAGMTVDEKRK--QSVDFSDTYAKASQRIIVKSDSAIA 166 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L G + VQ GTT +L ++D + + + E A + DA D Sbjct: 167 TPDDLKGKVVGVQQGTTGDLYVSDLEADN---TTVERYNKGFEAVQALSQGKIDAVVIDG 223 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D IL + + A A+ +G+TE + ++ T + + +L Sbjct: 224 EPAKVFVEQTDG---LKILDEAFTDEEYAVAVKKGNTELLDKINSTLKNLKESGKLD 277 >gi|221209255|ref|ZP_03582241.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD2] gi|221170873|gb|EEE03334.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD2] Length = 260 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 42/243 (17%), Positives = 83/243 (34%), Gaps = 21/243 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ + + +L ++ A K ++ G + F +G GFD Sbjct: 1 MKR--LIAAVSIALLAASAGPAVA------KDWTTIRFGTDASYAPFESKAPDGKLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + +K +L N AL++K+ D + + T R +G F Sbjct: 53 IDLGNEICARL---KAKCVWLENNFDGMIPALKAKKFDAVLSSMSITPQRAQQIG--FTT 107 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y ++ K + + L G SI V+ GT E Y+ + ++ Sbjct: 108 KIYNQPTRLVVKKGSPLLPTAESLKGKSIGVEQGTIQETYAKTYWAPKG--VKVVPYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +++ A A R D D L R + + + + D Sbjct: 166 DQVYADLIAGRLDGALQDAVQAEIGFLKTPRGASFDFAGKDLDDPKTLGEGAGIGLRKED 225 Query: 235 TEW 237 T+ Sbjct: 226 TDL 228 >gi|206560948|ref|YP_002231713.1| periplasmic histidine-binding protein [Burkholderia cenocepacia J2315] gi|198036990|emb|CAR52911.1| periplasmic histidine-binding protein [Burkholderia cenocepacia J2315] Length = 260 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I K ++ + Sbjct: 20 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI---NVKCVWVAQDLDGIIP 76 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149 AL++K+ D++ + T R + F Y I + +V+ L G + Sbjct: 77 ALKAKKYDVIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKTGSPLLPTVASLKGKRVG 134 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E Y++ I ++ +++ A + R DA D L Sbjct: 135 VEQGSTQETFAKAYWEPQG--VTIIPYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 192 Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245 R K P A + + DT+ ++ Sbjct: 193 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKLKINRAL 233 >gi|110800184|ref|YP_695034.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens ATCC 13124] gi|110674831|gb|ABG83818.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens ATCC 13124] Length = 278 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 40/290 (13%), Positives = 95/290 (32%), Gaps = 30/290 (10%) Query: 1 MYKDFF-----VSILCLIILFFTSFST-------NASILGDIKKRGFLKCGINTGLVGFA 48 M K+ F V+++ + L + + IK+ G L G++ + Sbjct: 1 MKKNIFKKILSVAMIGGLTLSLAGCGAKTAKENGSNDKVAKIKESGKLVVGLSADYAPYE 60 Query: 49 E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 G D+D + ++ + D ++ + ++++ ID+ Sbjct: 61 FHIIKDGKDQIVGLDIDIAKEVAKNLGVD---LEIKEMEFGAIIQSVKNGMIDMGISG-- 115 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADY 163 T + + F I Y QG +++K I + L G + Q G+ + Sbjct: 116 ITPDEKRKEAVDFSDIYYEAEQGILINKDNKESIKGIGDLKGKKVGAQMGS-----IQAE 170 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + + V + + + DA ++ A + V I + Sbjct: 171 IAKGIEGADVKLLDNVNTLILELKTGKLDAVITELP--VAKIASEVNSELAVADEVIKNS 228 Query: 224 S-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 A AI +G+ + + V+ T + + ++ + ++ + Sbjct: 229 EGGSAIAIQKGNKDLVDEVNSTIKELKESGKIDQFTNDAIELVPYQKKEE 278 >gi|1805432|dbj|BAA08994.1| yckK [Bacillus subtilis] Length = 268 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 77/263 (29%), Gaps = 26/263 (9%) Query: 1 MYKDFFVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFAE 49 M K + + I + + + IKK+G L G F Sbjct: 1 MKKALLALFMVVSIAALAACGAGNDNQSKDNAKDGDLWASIKKKGVLTVGTEGTYEPFTY 60 Query: 50 VKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + G+DV+ ++ + K+ + F L SK+ D+++ T Sbjct: 61 HDKDTDKLTGYDVEVITEVAKRLG---LKVDFKETQWGSMFAGLNSKRFDVVANQVGKT- 116 Query: 109 LREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 + F + K I S + + G + Q+ T+ LA A Sbjct: 117 --DREDKYDFSDKYTTSRAVVVTKKDNNDIKSEADVKGKTSA-QSLTSNYNKLATNAGAK 173 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 E + + + R D D A+ T+ + + +S Sbjct: 174 -----VEGVEGMAQALQMIQQARVDMTYNDKLAVLNYLKTSGNKNVKIAFETGEPQSTY- 227 Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250 +G E + V+ M Sbjct: 228 FTFRKGSGEVVDQVNKALKEMKE 250 >gi|323441690|gb|EGA99335.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus O46] Length = 467 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 34/260 (13%), Positives = 86/260 (33%), Gaps = 17/260 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDD 74 T+ + IK+RG L+ G++ V ++ G D+D + ++ + Sbjct: 7 TAHAEQDQTWEKIKERGELRVGLSADYAPMEFEHTVNGKTEYAGVDIDLAKKIAKD---N 63 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 K++ + ++ AL++ +IDI+ T R+ + F ++ K Sbjct: 64 NLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERKK--QVDFSDSYMMTKNNMLVKKD 121 Query: 135 --KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 + + + Q GT E + R+ ++ A ++ + + Sbjct: 122 KVNEYKDIKDFNNKKVGAQKGTEQEKIAQTEIE----NASITSLSRLPDVILALKSGKVE 177 Query: 193 AYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 + A N + +V + + +A + + + + ++ T + Sbjct: 178 GAVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIA--VPKDSPKLLSQINKTIKEVKDK 235 Query: 252 EELGITQKNINQVSKDTTNP 271 + N D + Sbjct: 236 GLIDKYMTNAANAMNDDSGF 255 >gi|323141554|ref|ZP_08076439.1| putative cyclohexadienyl dehydratase [Phascolarctobacterium sp. YIT 12067] gi|322413966|gb|EFY04800.1| putative cyclohexadienyl dehydratase [Phascolarctobacterium sp. YIT 12067] Length = 263 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 87/261 (33%), Gaps = 15/261 (5%) Query: 2 YKDFFVSILCLIILFFTSF--STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKG 58 K ++L I + S A + D++ RG L G + + G ++G Sbjct: 5 KKLCVGALLATTICGMGALTPSAEAGKIEDVQARGILLVGSTGDYKPMSYLNKETGKYEG 64 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ L+ ++ +QY+P K + + DI T RE + Sbjct: 65 FDVEVAELLAQSLGVK---VQYVPTTWKTLQADTMAGKFDIAMCGVTRTFARE--QKMNM 119 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G+ + K S+ V+ T + ++ +V + Sbjct: 120 SHGYLTFGKTILCRKADAKKFTSEADLNKNSVRVMVNPGGTNEKFALSNLPNCTLLVHPQ 179 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 EI A + D + + +D +L D +K+ + +GD +W Sbjct: 180 NAEIPALIAEGKADVMITETME-ARRYVRDDARLAAPLLDDPFTKNHFGILMAKGDQDWL 238 Query: 239 NIVSWTHYAMVTAEELGITQK 259 N V++ EE + Sbjct: 239 NYVNFFM------EEKDMDGT 253 >gi|157371563|ref|YP_001479552.1| cationic amino acid ABC transporter periplasmic binding protein [Serratia proteamaculans 568] gi|157323327|gb|ABV42424.1| cationic amino acid ABC transporter, periplasmic binding protein [Serratia proteamaculans 568] Length = 260 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 75/216 (34%), Gaps = 13/216 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 LK G + F A G+ GFD+D + L I +K ++ + +L++ Sbjct: 27 TLKIGTDPTYAPFESKNAKGELVGFDIDLAKELCKRI---NTKCTFVESDFDALIPSLKA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAG 153 K+ID + + T R +AF Y I K + L G S+ V G Sbjct: 84 KKIDAIISSLSITEKR--QQEIAFTDKLYAANARLIAPKGSKLLPTVDALKGKSVGVLQG 141 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT E ++ + + ++ + + A + R DA D A L + Sbjct: 142 TTQEAYANAMWQPKGI--TVVPYQNQDLVYADLASGRIDAAFQDEVAGSDGFLKQPPGKD 199 Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244 + + + + + DTE + Sbjct: 200 YAFAGESVKDDKFFGVGTGMGLRKTDTELKAALDKA 235 >gi|111023902|ref|YP_706874.1| glutamate-binding protein precursor [Rhodococcus jostii RHA1] gi|110823432|gb|ABG98716.1| glutamate-binding protein precursor [Rhodococcus jostii RHA1] Length = 295 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 32/243 (13%), Positives = 80/243 (32%), Gaps = 9/243 (3%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 + + + I + G L+ G G + G+ +G+++D R ++ + Sbjct: 36 AVAQAPQFAPGTTMEKIAREGVLRVGTRFDHPGLSARNLRGEQEGYEIDLVRYIAGKLGV 95 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +I++ N+ R LQ ++D++ R ++F + K Sbjct: 96 PADRIEWTEANSASREQLLQQDKVDVVVATLSINDKR--RQVISFGGPYLDINNDLVTVK 153 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + V +T ++ + + + + I F+ + A + DA Sbjct: 154 GNPKNITD--PQTPNGVTVCSTLGGAVSASLRKNFPQTNLIEFDVSSKCIDALKNGSVDA 211 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH---YAMVT 250 + + + ++ + I +GD + ++ Y+ + Sbjct: 212 LATQGPIGAGYVSKDQK--DIELINKPFAVESWGVGIAKGDVAFCEFLNSAITDYYSDGS 269 Query: 251 AEE 253 AEE Sbjct: 270 AEE 272 >gi|301300302|ref|ZP_07206510.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852105|gb|EFK79781.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 485 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 89/281 (31%), Gaps = 30/281 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ I+ + + N + + G + F N + G D Sbjct: 1 MLKKAFIFIVSCLCTLLIFTNLNNNHVNA--DTKTYNIGTDVTYPPFEFANKNNQYVGID 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + K+ P+ +LQS QID + T R+ F Sbjct: 59 IDLMKAIAKE---EGFKVNIQPIGFNSAVQSLQSGQIDGVIAGMAITDERK--QKFDFSK 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + + I+S+ QL G + ++ GT + K + F+ + Sbjct: 114 PYYKTGFIMAVAENSNITSLKQLRGKRVALKTGTAAANYALSLKDKYGFKT--VTFDDSD 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---- 236 I A D+ + T + I+ A+++G + Sbjct: 172 NIYNDVVNGNSVACFEDMPVMQYAIQTGTK---LKIVTKPAQSGYYGFAVMKGKNQELLH 228 Query: 237 --------------WYNIVSWTHYAMVTAEELGITQKNINQ 263 + IV+ AE+ + + N+ Sbjct: 229 KFDDGLAKLKKNGGYDKIVNRYINQNTIAEQKKANENSNNE 269 >gi|222102301|ref|YP_002546891.1| ectoine/hydroxyectoine ABC transporter solute-binding protein [Agrobacterium radiobacter K84] gi|221728418|gb|ACM31427.1| ectoine/hydroxyectoine ABC transporter solute-binding protein [Agrobacterium radiobacter K84] Length = 286 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 41/286 (14%), Positives = 88/286 (30%), Gaps = 19/286 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + F S+L + + S A S L IK+ G ++ G + ++ + +G G Sbjct: 1 MKRIFLASVLAIFSAGIVASSAAAESTLERIKRTGVVQIGFSNEK-PYSFKQPDGSLAGV 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D + RA + + + + + L++ D ++ + +AF Sbjct: 60 DYELARAAFAKLGVH--TVDGVAVKFSTLIPGLKAGHFDAIAAGLFI--RPDRCAEIAFA 115 Query: 120 PITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + K I S + + D+ + + +VF+ Sbjct: 116 EPHIQIADAITVQKGNPKNIHSYDDVLKNPTIKIGTQQGSASRKDFERLGIPESQLVVFQ 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDR---------PSEHVILPDIISKSPLAP 228 E+ A ++ R D + A + P + S + L Sbjct: 176 DFPEVFFALKSGRVD--LTTSTIFAANESIAADGGKSVERATPFILPVFDGKPSINYLGF 233 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 + D + + A + + + D +PDV+ Sbjct: 234 GFRKDDQDLVAAFNDALRAFRSTPDYEAILAKYSVTPADVPSPDVK 279 >gi|78067200|ref|YP_369969.1| lysine/arginine/ornithine ABC transporter periplasmic ligand-binding protein [Burkholderia sp. 383] gi|77967945|gb|ABB09325.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 260 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 79/222 (35%), Gaps = 15/222 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G+ GFDVD + + I + ++ + Sbjct: 20 KEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRINVN---CVWVAQDLDGIIP 76 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149 AL++K+ D++ + T R + F Y I + +++ L G + Sbjct: 77 ALKAKKYDVIVSSLTVTDKR--REQIDFSDKVYDAPARMIAKTGSPLLPTIASLKGKRVG 134 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E Y++ I ++ +++ A + R DA D L Sbjct: 135 VEQGSTQETYAKAYWEPQG--VTIIPYQNQDQVYADLGSGRLDATLQDELQADYGFLRTP 192 Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTH 245 R K P A + + DT+ ++ Sbjct: 193 RGKGFAFAG-PEVKDPKTIGDGTAIGLRKEDTDLKLKINKAL 233 >gi|168205901|ref|ZP_02631906.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens E str. JGS1987] gi|182624018|ref|ZP_02951806.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens D str. JGS1721] gi|170662631|gb|EDT15314.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens E str. JGS1987] gi|177910911|gb|EDT73265.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens D str. JGS1721] Length = 519 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 90/246 (36%), Gaps = 13/246 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 F++I L+++ + + +I + + + + F + G+ KGF+VD Sbjct: 26 FLTISILMMVLVGCSNNSNNIQKNSTNKEKITVATSGTYYPFTFL-EGGELKGFEVDVWN 84 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 + + D +++ + F L+S +++ ++ T RE F + Sbjct: 85 EIGKRLGYD---VEFKTASFSGLFGMLESGKVNTIANQITVTPEREE--KYYFSEPYVYS 139 Query: 126 GQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 G I+ K I S L G + V G+ E + D K N + + ++ + Sbjct: 140 GAQIIVKKGNDSIKSFDDLKGKKVGVDLGSNYEKIVKD--KDENNEIKILTYQNTDAAFN 197 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD--TEWYNIVS 242 R DA D + A+ ++ + + I K A ++ + + V+ Sbjct: 198 ELLLGRIDAVVIDRVS--AIAAIKEKDLNLQLAGEPIDKIENAYPFVKDEKGKDLSENVN 255 Query: 243 WTHYAM 248 M Sbjct: 256 KALDEM 261 >gi|331701148|ref|YP_004398107.1| polar amino acid ABC transporter inner membrane subunit [Lactobacillus buchneri NRRL B-30929] gi|329128491|gb|AEB73044.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus buchneri NRRL B-30929] Length = 715 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 35/238 (14%), Positives = 73/238 (30%), Gaps = 16/238 (6%) Query: 1 MYKDFFVS--ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + +L + S + + G + F + G Sbjct: 1 MKRKVLTAFGLLAAFATILFCLALPGSE----AQAKTYQIGTDVTYPPFEFANKENKYVG 56 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D+D ++++ + K+ P+ ++QS Q+D + T R+ F Sbjct: 57 IDIDIIKSIAKE---EGFKVNVKPVGFNAAVQSVQSGQLDGIIAGMTITPERK--DKFDF 111 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G + K I+S QL G + ++ GT K + K + F+ Sbjct: 112 GTPYYKTGAVMAVKKGSDITSFKQLKGKKVALKTGTAAADYANSLKKKYGFKT--VTFDD 169 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + A D L+ + I ++ + +G + Sbjct: 170 SDNMYQDVTTGNSVACFDDQPV---LQYGIKHGLKLQIASKPANQGWYGFGVKKGTHK 224 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 85/257 (33%), Gaps = 24/257 (9%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G + F N + G D+D RA+++ K++ L A++ Sbjct: 262 KTFVIGTDVTFPPFEFANKNNKYVGIDMDLIRAIANE---QGFKVKIKALGFNAAVQAVE 318 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 S Q D + T R+ F + G + K I +S+L G + V+ G Sbjct: 319 SGQADGVIAGMSITNERKA--QFDFSKPYFNSGVVMAVAKNSKIHKLSELKGKRVAVKTG 376 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 T+ K + K + F+ + A D + + + ++ Sbjct: 377 TSGADYANSIKKKYGFK--VVTFDDSNNMYQDVSTGNSVACFEDHPVM---QYAIKQGTK 431 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 I+ +P A+ +G + A++ A Q + + T + Sbjct: 432 LKIVTKPALNAPYGFAVKKGHNQ----------ALLQA----FNQGLADLKASGTDDSIK 477 Query: 274 QRFLGIDKSSNIGEALG 290 ++LG D+ + G Sbjct: 478 AKYLGADEIKTAAKTSG 494 >gi|298717382|ref|YP_003730024.1| ABC transport system periplasmic solute-binding protein [Pantoea vagans C9-1] gi|298361571|gb|ADI78352.1| Putative ABC transport system, periplasmic solute-binding protein precursor [Pantoea vagans C9-1] Length = 256 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 86/250 (34%), Gaps = 22/250 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++L + F L+ G++ F A+G +GFD Sbjct: 1 MKKSVSLALLFSLTAFTQGALAQQ----------TLRFGVDPTFPPFESKAADGSLQGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + K Q++ + ALQ+K+ D + T R +AF Sbjct: 51 IDIGNAICAQA---KVKCQWVQMGFDSSIPALQAKKFDAILSAMSMTDKR--RQQVAFSD 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y + +++ L G +I V GT E +++ + + Sbjct: 106 MLYNTPSALLAPAASKLTTDVASLRGKTIGVAQGTIQETYAKTKWESQG--VKIVSYPNQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH----VILPDIISKSPLAPAIIQGDT 235 E+ A R D + + LT + ++ +I + A+ +GD Sbjct: 164 MEVYPDLVAGRLDGSLANAVSAEQGFLTTSEGKPYAIKGTLVDKVIFGDGVGIALRKGDE 223 Query: 236 EWYNIVSWTH 245 +++ Sbjct: 224 ANLKMINTAL 233 >gi|254504149|ref|ZP_05116300.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia alexandrii DFL-11] gi|222440220|gb|EEE46899.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia alexandrii DFL-11] Length = 280 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 71/180 (39%), Gaps = 5/180 (2%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 T A L D+ RG L+CG+ AN + GFDVD+C+ L++A+ + Sbjct: 32 PTQADTLDDVVDRGELRCGVVLDFPPIGYRDANNEPAGFDVDYCKDLAAAL---EVEATI 88 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 P+ ER + + + D++ T +L R ++G F +++ GI S Sbjct: 89 YPVTWAERLPVIVTGRADVVFGATSDSLARARTVG--FTIPYAIYYAQGVVNADSGIESF 146 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + G + GT E + ++ ++ E+ A + D +A Sbjct: 147 EDIRGKRVAGAIGTVPEQEWLKIAEEWGEEHLYQGYQSENEVFLAVAQGKADIGITTNTA 206 >gi|92114910|ref|YP_574838.1| extracellular solute-binding protein [Chromohalobacter salexigens DSM 3043] gi|91798000|gb|ABE60139.1| amino acid ABC transporter substrate-binding protein, PAAT family [Chromohalobacter salexigens DSM 3043] Length = 255 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 83/252 (32%), Gaps = 26/252 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++L +L ++F+ + L+ G++ A+G+ GFD Sbjct: 1 MKKLLTMTLLGSALLAGSAFAQD-----------TLRIGVDVPYEPMEYRTADGELTGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ AL + I ++ +++ L +++ D + + R+ + F Sbjct: 50 IELGNALCAEIG---AQCEWVVQAWDGIIPGLMARKYDAIMSSMTINEERK--QTVLFSD 104 Query: 121 ITYFDGQGFIMHKKKGISSV--SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + I L G +I VQ GT + D F + Sbjct: 105 PYFTPPSAWFTPSDSEIDFPAKQTLEGKTIGVQRGTLQDNYATDMF---GDVADISRYTT 161 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-----EHVILPDIISKSPLAPAIIQG 233 +++ A R D D + L +D S E + P A + Sbjct: 162 ADDLVLDMDAGRVDIAFLDFPVGKSTLLDSDEGSYKVVGEMITEPKKYFGDGFGIAFRKR 221 Query: 234 DTEWYNIVSWTH 245 D E + + Sbjct: 222 DQELADKFNEAL 233 >gi|239787353|emb|CAX83830.1| Extracellular solute-binding protein family 3 [uncultured bacterium] Length = 248 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 33/259 (12%), Positives = 87/259 (33%), Gaps = 23/259 (8%) Query: 1 MYK----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K + + ++ + N K ++ GI + F + Sbjct: 1 MIKISKPSYLKCVFGILGALLVTGCQNTQ-----KDPNTIQVGICSDYPPFESRNDQNEL 55 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G+DVD R + + + ++ ++ ++QS +ID++ + T RE + Sbjct: 56 VGYDVDLARIIGKELGKK---VNFVDMSFNALLSSVQSGKIDMVISSVGITEEREK--QV 110 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F +F+ + K+ + + L G I VQ G++ ++ + Sbjct: 111 DFSDPYFFNRLTVVSRKEMPLLDENALKGKKIGVQLGSSF-----AHWAKIRNLKNVATM 165 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + ++ A + + + D + N H + +++ + Sbjct: 166 DLNPQLIEALKTRQIEGVIIDYTQAAIFCKKNANLVYHF----LTHDEKGTAVVLKKGST 221 Query: 237 WYNIVSWTHYAMVTAEELG 255 +++ + ++ +L Sbjct: 222 LRTLINQILQRLKSSGQLK 240 >gi|197302608|ref|ZP_03167663.1| hypothetical protein RUMLAC_01337 [Ruminococcus lactaris ATCC 29176] gi|197298506|gb|EDY33051.1| hypothetical protein RUMLAC_01337 [Ruminococcus lactaris ATCC 29176] Length = 273 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 49/285 (17%), Positives = 90/285 (31%), Gaps = 35/285 (12%) Query: 1 MYKDFFVSILCLII---LFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVG 46 M K LC + + S N+ L +K +G L GI T Sbjct: 2 MKKKVLSVFLCAGLAVSMLAGCGSGNSDTKDKKDAAADSDLEYVKDKGTLVVGI-TDFEP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 NG+W GFD D A + + D ++++ ++ + L L K ID + Sbjct: 61 MDYKDDNGNWIGFDADMASAFAEELGVD---VEFVEIDWDNKVLELDGKSIDCVWNGMTL 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T E++ + + Q ++ K L S V+AG+ E ++ Sbjct: 118 TD--EVTSSMECTDAYLNNAQVVVVPAEKADKYQDTDSLKDLSFAVEAGSAGEKQVS--- 172 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 N+ + + A DA D S + A + + ++ Sbjct: 173 ---NLNLNYTPVNAQADALMEVAAGTSDAAVID-SLMAAAMIGKGTGYADLTYTVSLNSE 228 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVT------AEELGITQKNINQ 263 +G + + +M AE+ + I + Sbjct: 229 EYGVGFRKGSDLAAELNKFFEKSMKDGTMKTCAEKYKVQAALIEE 273 >gi|168214789|ref|ZP_02640414.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens CPE str. F4969] gi|170713756|gb|EDT25938.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens CPE str. F4969] Length = 278 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 96/290 (33%), Gaps = 30/290 (10%) Query: 1 MYKDFF-----VSILCLIILFFTSFST-------NASILGDIKKRGFLKCGINTGLVGFA 48 M K+ F V+I+ + L ++ + IK+ G L G++ + Sbjct: 1 MKKNIFKKMLSVAIIGGLTLSLAGCGAKTAKENGSSDKVAKIKESGKLVVGLSADYAPYE 60 Query: 49 E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 G D+D + ++ + D ++ + ++++ ID+ Sbjct: 61 FHIIKDGKDQIVGLDIDIAKEVAKNLGVD---LEIKEMEFGAIIQSVKNGMIDMGISG-- 115 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADY 163 T + + F I Y QG +++K+ I + L G + Q G+ + Sbjct: 116 ITPDEKRKEAVDFSDIYYEAEQGILINKENKESIKGIGDLKGKKVGAQMGS-----IQAE 170 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + + V + + + DA ++ A + V I + Sbjct: 171 IAKGIEGADVKLLDNVNTLILELKTGKLDAVITELP--VAKIASEVNSELAVADEVIKNS 228 Query: 224 S-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 A AI +G+ + + V+ T + ++ + ++ + Sbjct: 229 EGGSAIAIQKGNKDLVDEVNSTIKELKENGKIDQFTNDAIELVPYQKKEE 278 >gi|311032513|ref|ZP_07710603.1| amino acid ABC transporter (amino acid-binding protein) [Bacillus sp. m3-13] Length = 272 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 32/227 (14%), Positives = 72/227 (31%), Gaps = 13/227 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 ++L ++ G L G F +G GFDV+ A++ + + ++++ Sbjct: 40 NLLSKVEGEGELLVGTEGTYPPFTFHDESGKLTGFDVEIAEAIAEKMGVE---VKFMETQ 96 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQL 143 F L SK+ D+++ + F + I S + Sbjct: 97 WDAMFAGLDSKRFDMIANQVGI--REDRLEKYDFSDHYITSAAVLVAKEDNDEIKSFEDI 154 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G Q+ T+ +A +KA + + ++R D D ++ Sbjct: 155 EGKKSA-QSLTSNYADIAREYKA-----EIEGVDGFNQAIELINSNRVDVTINDKLSVLD 208 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + + I+ + + +G E V+ ++ Sbjct: 209 FQKNRPNA-QIKIVDEAGDAAQSGMMFRKGSDELVEAVNKALAEIIE 254 >gi|262164883|ref|ZP_06032621.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio mimicus VM223] gi|262027263|gb|EEY45930.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio mimicus VM223] Length = 243 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 84/260 (32%), Gaps = 31/260 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L+ + +K + F + N +GFD Sbjct: 1 MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + AL+ K+ D D T R ++F Sbjct: 48 VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVSFSN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ ++ + L G + VQ G+T + L + + + + Sbjct: 103 PYYDNSAAFVSLA-DKVADQAALKGKRVGVQNGSTHQSFLLEQLP----DVVAVPYSSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + + R D+ GD + + + + + ++ + A+ + + Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLTYVGERVTNAQYFGNGFGIAVNKDNQ 214 Query: 236 EWYNIVSWTHYAMVTAEELG 255 + ++ A+ E Sbjct: 215 ALVDQLNAALEAVKENGEYA 234 >gi|170692720|ref|ZP_02883882.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia graminis C4D1M] gi|170142376|gb|EDT10542.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia graminis C4D1M] Length = 260 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 81/225 (36%), Gaps = 13/225 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K ++ G++ F ++G GFD+D + + + +K ++ + Sbjct: 23 KDWTTIRFGVDASYPPFESKGSDGKLVGFDIDLGNEICARL---KAKCVWVENDFDGMIP 79 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149 AL++K+ D + + T R + F + + K GI + L G ++ Sbjct: 80 ALKAKKFDGVLSSMSMTPQRAEQVA--FSSKLFNTPTRLVAKKGSGILPTAESLKGKTVG 137 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ GT E Y++A + ++ +++ A + R DA D L Sbjct: 138 VEQGTIQETYAKTYWEAKG--TKVVPYQNQDQVYADLLSGRLDAALQDAVQAEIGFLKTP 195 Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMV 249 R + + + + + + DT+ V ++ Sbjct: 196 RGAGFDFVGKNLDDPKILGNGAGIGMRKEDTDLKAKVDKAIADII 240 >gi|240080270|ref|ZP_04724813.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae FA19] gi|240115222|ref|ZP_04729284.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae PID18] gi|260440960|ref|ZP_05794776.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae DGI2] Length = 274 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 68/224 (30%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFFTS--------------FSTNASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L + + S++ I +G + G Sbjct: 1 MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAISGSLIERINNKGTVTVGTEGTYAP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 61 FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + H I S++ + G + KA Sbjct: 118 T-SPERQATFDKSEPYSWSGAVLVAHNDSNIKSIADIKGVKTAQSLTSNYGE------KA 170 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 171 KAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214 >gi|325693524|gb|EGD35443.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK150] Length = 287 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 84/246 (34%), Gaps = 9/246 (3%) Query: 2 YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K + S+ + +L + +S ++ ++ G F+ +G G+D Sbjct: 16 KKTLKYFSLAAVSVLALGALVACSSSSEKKTEKTKVEVGTVGTTKPFSYEDKDGKLTGYD 75 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ RA+ D ++ + F L S + I + N E + + Sbjct: 76 IEVLRAIFKD--SDKYEVNFNKTKWASIFSGLDSDRYQIGANNIS--YSEERADKYLYAS 131 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-- 178 + ++ K + I S+ + G S V GT+T L DY K H+ I + Sbjct: 132 PYAKNPTVLVVRKGEDIKSLDDIGGKSTEVVQGTSTAQQLEDYNKEHSDNPTKINYTDGT 191 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237 +++I A R D + + + ++ + P I G + Sbjct: 192 IQQILANLNDGRTDYKIFER-ITVESIIKDQGLDNLEVIELPSDQQPYVYPIIASGQEDL 250 Query: 238 YNIVSW 243 V+ Sbjct: 251 QKFVNK 256 >gi|170761692|ref|YP_001786564.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum A3 str. Loch Maree] gi|169408681|gb|ACA57092.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum A3 str. Loch Maree] Length = 274 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 78/251 (31%), Gaps = 10/251 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVK-ANGDWKGF 59 +K F+S+ ++ L T + A +IK+ +K G + F + + +GF Sbjct: 6 FKKIFLSMSLVVALGVT-LTACAQKNKEIKENKNTIKIGTSGQYYPFTFIDKDSNKVQGF 64 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D + P + + L + +ID ++ T + F Sbjct: 65 EIDIWEEIGKRTGYKPE---FKVADWTGIMGMLDTGKIDTVANEITVTD--KKKEKYYFS 119 Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFE 177 + G K I S+ L G ++ Q GT ++ DY + + Sbjct: 120 KPYVYSGVQLATKKGNNNIKSLKDLEGKTVATQVGTNYSKSIEDYNNKNKGEDIKTKQYN 179 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + R DA D A + + P ++ + E Sbjct: 180 SFSGMFQDVDLGRVDALIEDKLACLVNIKKSGLNLQLAGEPIEEMENAYPFVKKDENKEK 239 Query: 238 YNIVSWTHYAM 248 ++ M Sbjct: 240 IEKINKALDDM 250 >gi|260889291|ref|ZP_05900554.1| CjaC protein [Leptotrichia hofstadii F0254] gi|260860702|gb|EEX75202.1| CjaC protein [Leptotrichia hofstadii F0254] Length = 247 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 84/257 (32%), Gaps = 29/257 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F V L + L + L+ G+N F V NG GFD Sbjct: 1 MKKVFLVLTLVIFGLVSCGKKDSGQ--------KKLRVGLNAVFAPFEYV-ENGQVTGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + + ++ + + AL++ +IDI+ T R+ + F Sbjct: 52 VDMINEIGKNLGYE---VEIIDQSFDGLIPALKAGKIDIIVSGMSSTEERKK--SVDFTD 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + ++ K + + LSG I VQ GT E+ A + E Sbjct: 107 DYFVSKETYLRKKGNTAVTPATLSGKKIGVQLGTIQEMEAKTINGA-----TVVPNESTV 161 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +A + DA + + A + P + + A+ + + Sbjct: 162 NTILDLKAGKIDAIILEKA--VAEEYMKKNPEMEIFDEKPAK---IGMAMAVNKGKNPEL 216 Query: 241 VSWTHYAMVTAEELGIT 257 + + AE + Sbjct: 217 IKQ-----INAELKKMR 228 >gi|320178716|gb|EFW53679.1| Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ [Shigella boydii ATCC 9905] Length = 260 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 89/244 (36%), Gaps = 20/244 (8%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ G + F + G+ GFD+D + L I ++ ++ +L++K Sbjct: 28 IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKAK 84 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154 +ID + + T R +AF Y ++ K I +V L G + V GT Sbjct: 85 KIDAIMSSLSITEKR--QQEIAFTDKLYAADFRLVVAKNSDIQPTVESLKGKRVGVLQGT 142 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T E +++ + + ++ + I + A R DA D A L ++ Sbjct: 143 TQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDY 200 Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + L + + D E ++ +A + A+ +++K Sbjct: 201 KFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKYF 253 Query: 270 NPDV 273 + DV Sbjct: 254 DFDV 257 >gi|288555858|ref|YP_003427793.1| arginine ABC transporter arginine-binding protein [Bacillus pseudofirmus OF4] gi|288547018|gb|ADC50901.1| ABC transporter (arginine-binding protein) [Bacillus pseudofirmus OF4] Length = 285 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 37/257 (14%), Positives = 87/257 (33%), Gaps = 36/257 (14%) Query: 1 MYK----------DFFVSILCLIIL-FFTSFSTNASILGDIK-----------------K 32 M K V + ++ + +++ + Sbjct: 1 MKKYKWSVAGLSAILSVGLSAILSVGLLAGCGAEGDGPAEVEAPAEEPTEEVNEDATSGE 60 Query: 33 RGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 G L + + V +G+ GFD+D ++S + + ++ ++ A Sbjct: 61 GGTLIMATSADYPPYESVDLESGEIVGFDIDIANHIASELGYE---LEIQDVDFNGLIPA 117 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 +++ + D + T R+ + F I Y + + +G+S+V L G ++ VQ Sbjct: 118 MEAGRADFVLAGMTPTEERKE--NVDFSDIYYEAQNLIVSKEDQGLSAVEDLEGLTVGVQ 175 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 G+ E D + +R+ E+ A R DA + + + Sbjct: 176 LGSIQEGEAEDLAEEIGFNVE--KRDRIPELIQELLAGRLDAILMEDTVAAGYMESQSGL 233 Query: 212 SEHVILPDIISKSPLAP 228 ++ + + ++ S +A Sbjct: 234 AQFEVPSEELAGSAIAF 250 >gi|268686159|ref|ZP_06153021.1| amino acid permease substrate-binding protein [Neisseria gonorrhoeae SK-93-1035] gi|268626443|gb|EEZ58843.1| amino acid permease substrate-binding protein [Neisseria gonorrhoeae SK-93-1035] Length = 275 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L + + S++ I +G + G Sbjct: 2 MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAISGSLIERINNKGTVTVGTEGTYAP 61 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 62 FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 118 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + I S++ + G + KA Sbjct: 119 T-SPERQATFDKSEPYSWSGAVLVARNDSNIKSIADIKGVKTAQSLTSNYGE------KA 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 172 KAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215 >gi|239998563|ref|ZP_04718487.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria gonorrhoeae 35/02] gi|240013688|ref|ZP_04720601.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria gonorrhoeae DGI18] gi|240016128|ref|ZP_04722668.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria gonorrhoeae FA6140] gi|240120757|ref|ZP_04733719.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria gonorrhoeae PID24-1] gi|240123063|ref|ZP_04736019.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria gonorrhoeae PID332] gi|240125315|ref|ZP_04738201.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria gonorrhoeae SK-92-679] Length = 274 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L + + S++ I +G + G Sbjct: 1 MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAISGSLIERINNKGTVTVGTEGTYAP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 61 FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + I S++ + G + KA Sbjct: 118 T-SPERQATFDKSEPYSWSGAVLVARNDSNIKSIADIKGVKTAQSLTSNYGE------KA 170 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 171 KAAGAQLVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214 >gi|167033329|ref|YP_001668560.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166859817|gb|ABY98224.1| extracellular solute-binding protein family 3 [Pseudomonas putida GB-1] Length = 250 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 72/213 (33%), Gaps = 8/213 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ F V A+ GFD+D AL + + + + + AL + Sbjct: 23 TLRFATEGAYPPFNYVDADNKLHGFDIDITHALCEQMKVE---CTLVAQDWEGIIPALMA 79 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS-QLSGASICVQAG 153 ++ D + + T R +AF Y + K I S G ++ Q+ Sbjct: 80 RKYDAVVASMIDTEERRK--KIAFTDHYYRTPLTVAVAKDSKIDSAQTDFVGYTVGAQSS 137 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T + D + ++ ++E +A A R D D L+ N Sbjct: 138 STQAIYAEDVYGKAGAD--VKLYPTMDEANADLAAGRLDGVIADKFPLHEWMSKNGGDCC 195 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 ++ +K+ A A+ + D ++ Sbjct: 196 KILGDVADTKADAAIAVRKDDEALRQRLNTALQ 228 >gi|229588843|ref|YP_002870962.1| putative amino acid transporter substrate-binding protein [Pseudomonas fluorescens SBW25] gi|229360709|emb|CAY47567.1| putative amino acid transport system, substrate-binding protein [Pseudomonas fluorescens SBW25] Length = 259 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 86/232 (37%), Gaps = 12/232 (5%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 S L K+ L+ G++ F A+G GFD+D A+ + + K + Sbjct: 14 CMAAGSALA--KEYKELRFGVDPSYAPFESKAADGSLVGFDIDLGNAICAEL---KVKCK 68 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++ + L++ + D + + T +RE + F + + K G S+ Sbjct: 69 WVESDFDGMIPGLKANKFDGVISSMTVTPVREK--AIDFSNELFSGPTSLVFKKGAGYST 126 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G S+ + GT E + + +++ A + R DA D+ Sbjct: 127 PESLKGKSVGYEQGTIQEAYAKAVLDKAGVTTK--AYANQDQVYADLTSGRLDASVQDML 184 Query: 200 ALYALKLTNDRPSEHVI---LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 L + + + + + D + S A I +G+TE ++ A+ Sbjct: 185 QAELGFLKSPAGAGYEVSAAIDDPLLPSKTAIGIKKGNTELKALLDKGIKAL 236 >gi|262368132|pdb|3K4U|A Chain A, Crystal Structure Of Putative Binding Component Of Abc Transporter From Wolinella Succinogenes Dsm 1740 Complexed With Lysine gi|262368133|pdb|3K4U|B Chain B, Crystal Structure Of Putative Binding Component Of Abc Transporter From Wolinella Succinogenes Dsm 1740 Complexed With Lysine gi|262368134|pdb|3K4U|C Chain C, Crystal Structure Of Putative Binding Component Of Abc Transporter From Wolinella Succinogenes Dsm 1740 Complexed With Lysine gi|262368135|pdb|3K4U|D Chain D, Crystal Structure Of Putative Binding Component Of Abc Transporter From Wolinella Succinogenes Dsm 1740 Complexed With Lysine gi|262368136|pdb|3K4U|E Chain E, Crystal Structure Of Putative Binding Component Of Abc Transporter From Wolinella Succinogenes Dsm 1740 Complexed With Lysine gi|262368137|pdb|3K4U|F Chain F, Crystal Structure Of Putative Binding Component Of Abc Transporter From Wolinella Succinogenes Dsm 1740 Complexed With Lysine Length = 245 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 77/214 (35%), Gaps = 14/214 (6%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 RG L+ G+ G + F G+ GFDVD R + A ++ +P + L Sbjct: 4 RGELRVGLEPGYLPFEXKDKKGNVIGFDVDLAREXAKAXGVK---LKLVPTSWDGLIPGL 60 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICV 150 +++ DI+ + R +L + F GQ ++ K + S L + + Sbjct: 61 VTEKFDIIISGXTISQER--NLRVNFVEPYIVVGQSLLVKKGLEKGVKSYKDLDKPELTL 118 Query: 151 QAGT--TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 + E FK ++ E + D + D+ A Sbjct: 119 VTKFGVSAEYAAKRLFK----NAKLKTYDTEAEAVQEVLNGKADXFIFDLPFNVAFXAQK 174 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + V L ++ PL AI +GD ++ N ++ Sbjct: 175 GQGY-LVHLDTSLTYEPLGWAIKKGDPDFLNWLN 207 >gi|170734489|ref|YP_001766436.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|169817731|gb|ACA92314.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 260 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 60/230 (26%), Gaps = 14/230 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L IK G + G F G GFDVD A++ + P Q++ Sbjct: 25 DDLSQIKSAGVFRVGTEGTYAPFTYHDETGKLTGFDVDIATAIAQRLGVKP---QFVEGK 81 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQL 143 L + D + T R+ F I+ I S L Sbjct: 82 WDGLIAGLDVNRYDAVVNEVSITDARKA--KYDFSTPYITSHAVLIVRADNTTIRSFDDL 139 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G T+ LA A + + E + R DA D + Sbjct: 140 KGKKSA-NTLTSNFGKLAAAHGA-----DVVPVQGFNESIDLLTSGRVDATINDSLSYLD 193 Query: 204 LKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + + D + +G + A + A+ Sbjct: 194 FRKHKPDAKLKIAATDTSGAGDASGVLLRKGSPALVAAIDKAL-ADIKAD 242 >gi|240112482|ref|ZP_04726972.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae MS11] gi|240117509|ref|ZP_04731571.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae PID1] gi|268598549|ref|ZP_06132716.1| amino acid permease substrate-binding protein [Neisseria gonorrhoeae MS11] gi|268582680|gb|EEZ47356.1| amino acid permease substrate-binding protein [Neisseria gonorrhoeae MS11] Length = 274 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 68/224 (30%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFFTS--------------FSTNASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L + + S++ I +G + G Sbjct: 1 MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQAAISGSLIERINNKGTVTVGTEGTYAP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 61 FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + H I S++ + G + KA Sbjct: 118 T-SPERQATFDKSEPYSWSGAVLVAHNDSNIKSIADIKGVKTAQSLTSNYGE------KA 170 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 171 KAAGAQLVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214 >gi|256829241|ref|YP_003157969.1| extracellular solute-binding protein family 3 [Desulfomicrobium baculatum DSM 4028] gi|256578417|gb|ACU89553.1| extracellular solute-binding protein family 3 [Desulfomicrobium baculatum DSM 4028] Length = 246 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 83/258 (32%), Gaps = 25/258 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +L L ++ + + + + ++ + A+ + GF Sbjct: 1 MRTRIALVLLALFLMASNALAKD------------VVFAVDATYPPMEMIDADKNIVGFG 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + A+ A +P F L S + D ++ + T R+ + F Sbjct: 49 PEVVMAMGKAGGFNP---ILKNTAWDGIFAGLASGKYDAIASSVSITEERK--QSMDFSD 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + QG I+ K ISSV+ L+G ++ Q GTT A ++ + Sbjct: 104 PYFEVKQGVIVPKGAAISSVADLAGKTVASQMGTTGYFVCKKIEGA-----TAKSYDEIG 158 Query: 181 EIDAAYRAHRCDAYTGD---ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 R DA D S + L + L A+ +G+ E Sbjct: 159 LAVEDLYNGRIDAVIADDAVASNYALQHEQYSQKLTLAFLIAPEAPEYLGFAVNKGNKET 218 Query: 238 YNIVSWTHYAMVTAEELG 255 +++ A+ E Sbjct: 219 VELINSALAAIKANGEYD 236 >gi|261339171|ref|ZP_05967029.1| hypothetical protein ENTCAN_05395 [Enterobacter cancerogenus ATCC 35316] gi|288319016|gb|EFC57954.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Enterobacter cancerogenus ATCC 35316] Length = 243 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 73/218 (33%), Gaps = 16/218 (7%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G++ F + A+ GFD+D +AL + D + +L+ Sbjct: 22 KINFGVSATYPPFESLDASNQIVGFDIDLAKALCKQMQAD---CTFTNHAFDSLIPSLKF 78 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K+ D + D T R S ++F Y + I K ++ QL G I ++ GT Sbjct: 79 KKYDAVISGMDITPER--SKQVSFTDPYYANSAVVIAKKG-AYTAFDQLKGKRIGMENGT 135 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T + L D + ++ + + R D GD + + T P Sbjct: 136 THQKYLQDKHPE----VKTVAYDSYQNAIIDLKNGRIDGVFGDTAVVNEWLKT--NPQLG 189 Query: 215 VILPDIISKSP----LAPAIIQGDTEWYNIVSWTHYAM 248 + L A+ + ++ A+ Sbjct: 190 TATEKVTDPQYFGTGLGIAVRPDNKALLEKLNGALKAI 227 >gi|255505884|ref|ZP_05348662.3| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Bryantella formatexigens DSM 14469] gi|255265364|gb|EET58569.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Bryantella formatexigens DSM 14469] Length = 277 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 80/250 (32%), Gaps = 21/250 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L ++ F A ++ L N + + + + G D Sbjct: 4 MKK-LTAALLAGTMVLSFGFGAMA------EEDNVLVMATNAEFPPYEYHEGD-EIVGID 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + ++ + ++ + A+QS + DI T + + F Sbjct: 56 AEVAALIAEELG---MTLEIEDMAFDSVLAAVQSGKADIAMAGLTVTE--DRMQSVNFTD 110 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Q I+ + I+ LSG + VQ GTT ++ ++D + + Sbjct: 111 TYATAKQVIIVKEDSDIAGPDDLSGKIVGVQTGTTGDIYVSDE-----EGVTVERYNKGF 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E A + DA D N+ I+ + + A AI + + E Sbjct: 166 EAVQALTQGKIDAVVIDNEPAKVFVSENEG---IKIIDEAYADEEYAIAIAKDNDELLEK 222 Query: 241 VSWTHYAMVT 250 V+ + Sbjct: 223 VNTALNTLKE 232 >gi|93005158|ref|YP_579595.1| extracellular solute-binding protein [Psychrobacter cryohalolentis K5] gi|92392836|gb|ABE74111.1| extracellular solute-binding protein, family 3 [Psychrobacter cryohalolentis K5] Length = 305 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 83/260 (31%), Gaps = 26/260 (10%) Query: 3 KDFFVSILCLIILFFT---------SFSTNASILGDIKKR------GFLKCGINTGLVGF 47 K L ++ + + S + +K+ L+ G F Sbjct: 19 KPMLAVAAFLALVGCSNGQDKGAERTNSDANNTAETAEKKADATEGNVLRIGTEGAYAPF 78 Query: 48 AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 A+G GFD++ A+ + + + + + L++ + D + T Sbjct: 79 NYTNADGTLGGFDIEIANAICADM---QVTCEIVAQDWDGIIPGLKAGKYDAIVAAMSVT 135 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFK 165 R + +AF + + F+ K V+ ++ SI Q T + L + + Sbjct: 136 PER--AQQVAFTDPYFSNALVFLAKKDSTFDPAKVTDINAHSIAAQRSTISSQWLENTYP 193 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 +MK +++ + A R DA D + + + +I Sbjct: 194 KADMK----LYDTLSNAFLDLGAGRVDAMISDKLPAIEWLSSTSGNNYVLKGAEIDINDN 249 Query: 226 LAPAIIQGDTEWYNIVSWTH 245 A A+ D ++ + Sbjct: 250 FAIAVRPNDEALQAKINTSL 269 >gi|107024072|ref|YP_622399.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116691158|ref|YP_836781.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105894261|gb|ABF77426.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116649247|gb|ABK09888.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 260 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 60/230 (26%), Gaps = 14/230 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L IK G + G F G GFDVD A++ + P Q++ Sbjct: 25 DDLSQIKSAGVFRVGTEGTYAPFTYHDETGKLTGFDVDIATAIAQRLGVKP---QFVEGK 81 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQL 143 L + D + T R+ F I+ I S L Sbjct: 82 WDGLIAGLDVNRYDAVVNEVSITDARKA--KYDFSTPYITSHAVLIVRADNTTIRSFDDL 139 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G T+ LA A + + E + R DA D + Sbjct: 140 KGKKSA-NTLTSNFGKLAAAHGA-----DVVPVQGFNESIDLLTSGRVDATINDSLSYLD 193 Query: 204 LKLTNDRPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + + D + +G + A + A+ Sbjct: 194 FRKHKPDAKLKIAATDTTGAGDASGVLLRKGSPALVAAIDKAL-ADIKAD 242 >gi|260654266|ref|ZP_05859756.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Jonquetella anthropi E3_33 E1] gi|260630899|gb|EEX49093.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Jonquetella anthropi E3_33 E1] Length = 240 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 77/214 (35%), Gaps = 11/214 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 LK G + + + +G +GFDV+ A+++ + ++Q+ + AL + Sbjct: 23 VLKVGTESTYPPYEFIGPSGKLEGFDVELAEAVAAKLG---MEVQWQDMAFDALIPALLT 79 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K+ID+++ T R + F FI G S+ +L G + VQ GT Sbjct: 80 KKIDMIAAGMSATEERAKRVA--FSIPYEESVSAFITR-PDGPKSIEELKGKIVTVQLGT 136 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + D F F++ ++ R DA D+ + + Sbjct: 137 -----IQDTFADSMEGVTVKKFQKYDDCVREVVLGRADASLMDVPVAKDYVKSEQFGGKI 191 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + IS A A+ + E V AM Sbjct: 192 ALFEQKISTGDKALAMSKDAPELKEKVDAALKAM 225 >gi|91211605|ref|YP_541591.1| histidine-binding periplasmic protein of high-affinity histidine transport system [Escherichia coli UTI89] gi|237704786|ref|ZP_04535267.1| histidine-binding periplasmic protein [Escherichia sp. 3_2_53FAA] gi|91073179|gb|ABE08060.1| histidine-binding periplasmic protein of high-affinity histidine transport system [Escherichia coli UTI89] gi|222034065|emb|CAP76806.1| Histidine-binding periplasmic protein [Escherichia coli LF82] gi|226901152|gb|EEH87411.1| histidine-binding periplasmic protein [Escherichia sp. 3_2_53FAA] gi|294490305|gb|ADE89061.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli IHE3034] gi|307626154|gb|ADN70458.1| Histidine-binding periplasmic protein precursor [Escherichia coli UM146] gi|312946928|gb|ADR27755.1| histidine/lysine/arginine/ornithine transporter subunit HisJ [Escherichia coli O83:H1 str. NRG 857C] gi|315285929|gb|EFU45367.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 110-3] gi|323956075|gb|EGB51828.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H263] Length = 260 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 89/244 (36%), Gaps = 20/244 (8%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ G + F + G+ GFD+D + L I ++ ++ +L++K Sbjct: 28 IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKAK 84 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154 +ID + + T R +AF Y ++ K I +V L G I V GT Sbjct: 85 KIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRIGVLQGT 142 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T E +++ + + ++ + I + A R DA D A L ++ Sbjct: 143 TQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDY 200 Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + L + + D E ++ +A + A+ +++K Sbjct: 201 KFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKYF 253 Query: 270 NPDV 273 + DV Sbjct: 254 DFDV 257 >gi|84385571|ref|ZP_00988602.1| ABC-type amino acid transport/signal transduction system [Vibrio splendidus 12B01] gi|84379551|gb|EAP96403.1| ABC-type amino acid transport/signal transduction system [Vibrio splendidus 12B01] Length = 243 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 83/259 (32%), Gaps = 29/259 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L + +K + F + N +GFD Sbjct: 1 MKKILLASLIGLASFNAAAQE-------------EIKFAMEATYAPFEYMDENNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + AL+ K+ D D T R + F Sbjct: 48 VDLANALCEEL---KATCTFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LKQVNFSN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI + ++ + L G + VQ G+T + L + + + + Sbjct: 103 AYYDNSAAFISF-EGKVADQAALEGKRVGVQNGSTHQSFLLEQM----TGVTAVPYSSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + + R D+ GD + + D + + + ++ A+ + + E Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEWFKKEDNLT--YVGDQVTNQEYFGNGFGIAVNKSNQE 215 Query: 237 WYNIVSWTHYAMVTAEELG 255 + ++ A+ E Sbjct: 216 LVDQLNVALAAVKANGEYD 234 >gi|294793181|ref|ZP_06758327.1| glutamine ABC transporter, glutamine-binding protein [Veillonella sp. 6_1_27] gi|294794789|ref|ZP_06759924.1| glutamine ABC transporter, glutamine-binding protein [Veillonella sp. 3_1_44] gi|294454151|gb|EFG22525.1| glutamine ABC transporter, glutamine-binding protein [Veillonella sp. 3_1_44] gi|294456126|gb|EFG24490.1| glutamine ABC transporter, glutamine-binding protein [Veillonella sp. 6_1_27] Length = 260 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 90/252 (35%), Gaps = 17/252 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K ++++ + + + N ++ G L+ G T F + + + GFDV Sbjct: 5 KKLTAIALVAIAAMGLLAGCGN-DKPKMTQQEGVLRVGSETTFPPFEFTEGD-KYVGFDV 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + K+++ + A+QS ID+++ + T RE L F + Sbjct: 63 DLSEAIAKKLG---LKMEFKSMGFDALIPAVQSGDIDMIAAGINATPEREK--ALDFSDV 117 Query: 122 TYFD--GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + I ++ +L+G ++ Q GT + Sbjct: 118 YFDQGGFITVVRKDNTTIHNMDELAGKTVGAQIGTIPVEMAQKI-----PGTTVKQIDSN 172 Query: 180 EEIDAAYRAHRCD-AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I +A D A + A+Y LK D+ + V P + L + +G+ Sbjct: 173 ANIFMELKAGTIDGAIIDNAVAMYYLKQGADQDLKLVGEPTQSPGTVLG--VKKGNKALQ 230 Query: 239 NIVSWTHYAMVT 250 V+ + Sbjct: 231 EAVNKALKELKE 242 >gi|224418023|ref|ZP_03656029.1| amino acid-binding protein [Helicobacter canadensis MIT 98-5491] gi|253827355|ref|ZP_04870240.1| amino acid-binding protein [Helicobacter canadensis MIT 98-5491] gi|313141562|ref|ZP_07803755.1| amino acid-binding protein [Helicobacter canadensis MIT 98-5491] gi|253510761|gb|EES89420.1| amino acid-binding protein [Helicobacter canadensis MIT 98-5491] gi|313130593|gb|EFR48210.1| amino acid-binding protein [Helicobacter canadensis MIT 98-5491] Length = 243 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 88/247 (35%), Gaps = 22/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + L ++ F +++ + G+N F + + GFD Sbjct: 1 MKNFLKIFSIILALIAFFGC-------EKKEEKSKVYVGMNADFAPFEYREGK-NIVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD R ++ +++++ + AL+ +ID++ T R+ + F Sbjct: 53 VDLMREIAK---ISGIEVEFMDIQFDGLLPALELGKIDMIISGMTVTENRKKF--VNFSD 107 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q +++ + I + S LSG + V G T +L ++ F Sbjct: 108 SYFNSTQVILVNSENQNIGNFSDLSGKVVGVALGFTGDLVVSKL-----PNVSVQKFNTA 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ A ++H+ +A D K + ++ + A A+ + + E Sbjct: 163 SDLILALKSHKVEAVVLD---YETAKNYAAHNQDLKLIQSDAANEEYAIAMRKDEVELLQ 219 Query: 240 IVSWTHY 246 V+ Sbjct: 220 KVNEALK 226 >gi|268319123|ref|YP_003292779.1| ABC transporter permease component [Lactobacillus johnsonii FI9785] gi|262397498|emb|CAX66512.1| ABC transporter permease component [Lactobacillus johnsonii FI9785] Length = 497 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 86/263 (32%), Gaps = 26/263 (9%) Query: 1 MYKDFFVSILCLIILFFTSFS--------------TNASILGDIKKRGFLKCGINTGLVG 46 M K S +++FF+ + S+L IKK G L G + Sbjct: 1 MKKTKLFSFFFALLMFFSLGATFIKPAQAASQKQIAEGSVLKKIKKSGELVVGTSADYPP 60 Query: 47 FAEV---KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 + G D++ + ++ + + ++ +AL++ ++D++ Sbjct: 61 LEFTASENGKTKYVGVDIELAKDIAKDLGVK---LVIKNMSFDSLLVALETGKVDMVISA 117 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLAD 162 T R+ S+ + + K +S+ L G + Q G+ + Sbjct: 118 MTPTPERKQSVAFSKIYYKPSGEYFLVNKKDKDKYTSIQSLKGQMVGAQTGSNQYNLVKS 177 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 K ++ + A ++ + A + + N+ V + Sbjct: 178 QMK----DSKLKGLGKINNLVLALQSGKVSAVVVEE-LIAKAYAENNSGLAAVRSNLKET 232 Query: 223 KSPLAPAIIQGDTEWYNIVSWTH 245 ++ A AI +G + V+ T Sbjct: 233 QAGNAVAIAKGQDDLVAQVNKTI 255 >gi|163791315|ref|ZP_02185728.1| Putative amino acid ABC transporter, substrate binding/permease subunit [Carnobacterium sp. AT7] gi|159873394|gb|EDP67485.1| Putative amino acid ABC transporter, substrate binding/permease subunit [Carnobacterium sp. AT7] Length = 493 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 38/274 (13%), Positives = 93/274 (33%), Gaps = 23/274 (8%) Query: 2 YKDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAE---VKAN 53 K ++ +L LI +F + L DI+++G L G + + V Sbjct: 3 KKSLYLVVLSLIAVFSFFIPVETVFAADTALEDIQEKGTLVIGTSADFPPYEFHSTVNGK 62 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G D+ + ++ + + ++ + AL+S+++D++ T R Sbjct: 63 DTIVGMDISIAQKIAEDLGVE---LKIEDIGFDSLLPALESEKVDMVISGMSPTEER--K 117 Query: 114 LGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + F + Y GQ ++ + S + L G + VQ G+ E + Sbjct: 118 QSVDFSEVYYTGGQNIVVREADKEIYKSTADLKGLKVGVQTGSLQETLAQEQMP----DS 173 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAI 230 + + ++ A + ++ +A + + A +++ + A A Sbjct: 174 EILSLTKTTDLLLALKTNKVEAVLMEKPSAEAYVGNDNQILTFDGGFQLEEGEQGSAIAF 233 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264 + V+ + + E + + + Sbjct: 234 KKDTQSLVAAVNSSLTEI---SEQDLISDYLEEA 264 >gi|291457927|ref|ZP_06597317.1| histidine-binding protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291419471|gb|EFE93190.1| histidine-binding protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 314 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 80/257 (31%), Gaps = 30/257 (11%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 G G + V G ++G+D++ ++ + + P+N + + L Sbjct: 75 SGKFTVGFDQEFPPMGFVDDKGGYQGYDLELAEEVAKRLGLEFVP---QPINWDAKDMEL 131 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152 S ID + + ++ + Q F++ GI +++ LSG ++ VQ Sbjct: 132 SSGNIDCIWNGFSMQGREDK---YSWVGPYMANEQVFVVKDNSGIETLADLSGKAVEVQK 188 Query: 153 GTTTELTLADYFKAHNMK--YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT--N 208 ++ L + + ++ CDA D Sbjct: 189 DSSGLDALKEEENKKLKESFSSLTEVADYNTALMDLQSGACDAVCMDSVVAGYQITNSEK 248 Query: 209 DRP---SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 P + IL D +S +G+ E V ++ Sbjct: 249 KNPGSEEKMRILSDTLSAEEYGIGFRKGEDELAQSVRTVL----------------LEME 292 Query: 266 KDTTNPDVQR-FLGIDK 281 KD + ++ R + G D Sbjct: 293 KDGSTAEISRKWFGKDD 309 >gi|293446646|ref|ZP_06663068.1| histidine-binding periplasmic protein [Escherichia coli B088] gi|291323476|gb|EFE62904.1| histidine-binding periplasmic protein [Escherichia coli B088] Length = 266 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 89/244 (36%), Gaps = 20/244 (8%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ G + F + G+ GFD+D + L I ++ ++ +L++K Sbjct: 34 IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKAK 90 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154 +ID + + T R +AF Y ++ K I +V L G + V GT Sbjct: 91 KIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGT 148 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T E +++ + + ++ + I + A R DA D A L ++ Sbjct: 149 TQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDY 206 Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + L + + D E ++ +A + A+ +++K Sbjct: 207 KFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKYF 259 Query: 270 NPDV 273 + DV Sbjct: 260 DFDV 263 >gi|270159600|ref|ZP_06188256.1| extracellular solute-binding family protein [Legionella longbeachae D-4968] gi|289165609|ref|YP_003455747.1| amino acid (glutamine) ABC transporter, periplasmic amino acid binding protein [Legionella longbeachae NSW150] gi|269987939|gb|EEZ94194.1| extracellular solute-binding family protein [Legionella longbeachae D-4968] gi|288858782|emb|CBJ12687.1| amino acid (glutamine) ABC transporter, periplasmic amino acid binding protein [Legionella longbeachae NSW150] Length = 250 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 84/254 (33%), Gaps = 19/254 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F +S+ LI ++ ++ + + + F G+ KGFD Sbjct: 1 MKIIFSISLAGLIFFISLCYADSSD-----ENTQAIHFAVAAEYPPFEY-NDYGEIKGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D R ++ + + + AL Q+D T R F Sbjct: 55 IDLARLIAKKLGKVAY---FDAMQFSGILPALSLGQVDAAISTITITKQRNK--NFDFTE 109 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 YF+ + ++K I S +L+ I VQ GTT E+ L K + +V + Sbjct: 110 PYYFESMAAVFPQEKPIKSAKELTDKKIAVQLGTTMEIWL----KKNVPDASILVMDNNN 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + AA +A D D N S+ A+ +G Sbjct: 166 QTIAALKAGHVDLVLVDGIQGAVYSQKNPG---LSFSVIAHSEDGYGIALKKGSP-LTQK 221 Query: 241 VSWTHYAMVTAEEL 254 ++ + + + EL Sbjct: 222 LNNVLHDLEQSGEL 235 >gi|260774958|ref|ZP_05883858.1| cyclohexadienyl dehydratase [Vibrio coralliilyticus ATCC BAA-450] gi|260609048|gb|EEX35207.1| cyclohexadienyl dehydratase [Vibrio coralliilyticus ATCC BAA-450] Length = 258 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 80/245 (32%), Gaps = 14/245 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K F+ L L IL + S L +I G L+ G +KGF Sbjct: 1 MNK--FILALGLCILSIGQAAAETSRLHEILDSGVLRVGTTGDWNPMTMKDPATNSYKGF 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D L+ + ++Y+ + K + + + D ++ + + R G + Sbjct: 59 DIDVTTELAKDLGVK---VEYVATDWKTLVNGITANKYD-ITGSASLNMSRAKVAGYSQP 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFE 177 + S S A + V A T E + ++F + IV E Sbjct: 115 YFYLAFVPVVQKKDLQKFSDWSDFDKAEVKVAATLGTVQEKMVKEFFPSAKH----IVIE 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A R D L + V + + +P+A + Q D W Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVEKFKQ-LAIVPVKEPRKPTPIAMLLPQDDQVW 229 Query: 238 YNIVS 242 N ++ Sbjct: 230 INYIN 234 >gi|291301451|ref|YP_003512729.1| extracellular solute-binding protein family 3 [Stackebrandtia nassauensis DSM 44728] gi|290570671|gb|ADD43636.1| extracellular solute-binding protein family 3 [Stackebrandtia nassauensis DSM 44728] Length = 323 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 85/234 (36%), Gaps = 10/234 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD--PSKIQYLP 82 +L D K G L G+ E K + ++GFD++ + L +F K+++ Sbjct: 71 GLLADAVKDGKLVVGVKPDQPLIGEKKGS-TYEGFDIEMAKLLGMRLFGKGGEEKVEFKE 129 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT-YFDGQGFIMHKKKGISSVS 141 + R L S ++D++ + + +F + + + K I ++ Sbjct: 130 TTSDNREAFLNSGEVDVVIASYSM--YPDRVKQFSFAGPYLFTGQNALVSAENKDIKTID 187 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G +C+ G+ + L K N K + A + DA + D + L Sbjct: 188 DLAGKKVCIAKGSGSIDNL----KKENPKAKIETRANYGDCAAQVKDGTFDAVSTDETIL 243 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 Y K + + + + P + +G+ + ++ A E+ Sbjct: 244 YGYKSQDKEAFRILDSSENFTDEPYGIGMKKGNDAAKDYINEMIKAAYENEDWD 297 >gi|91784368|ref|YP_559574.1| ABC polar amino acid transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|91688322|gb|ABE31522.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 260 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 66/248 (26%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ L S + A L IK G + G F +G GFD Sbjct: 1 MKSIRSILLIALFQAVAVSSAFAADELAQIKSAGVFRIGTEGTYAPFTYHDESGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A++ + P Q++ L + D + T R++ F Sbjct: 61 VEIGTAIAQRLGVKP---QFVEGKWDGLIAGLDVNRYDAVINEVAITDARKV--KYDFSD 115 Query: 121 ITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I + L G + A I + Sbjct: 116 PYITSHAALIVQSNNTTIRNFDDLKGKKSANTLTSNFGKIAAA------HGAEVIPVQGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL--PDIISKSPLAPAIIQGDTEW 237 E + R DA D + K + S A I +G+ + Sbjct: 170 NESIDLLTSGRVDATVNDSLSFLDFKKHKPDAKVKIAALDTSSDSSDKSAVLIRKGNPDL 229 Query: 238 YNIVSWTH 245 ++ Sbjct: 230 QAAINKAL 237 >gi|62182800|ref|YP_219217.1| putative arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|205355113|ref|YP_002228914.1| arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207859500|ref|YP_002246151.1| arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|62130433|gb|AAX68136.1| putative arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|205274894|emb|CAR39960.1| probable arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206711303|emb|CAR35681.1| probable arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|322717302|gb|EFZ08873.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|326626043|gb|EGE32388.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 239 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 87/251 (34%), Gaps = 26/251 (10%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + L L + S +A L G + + V A+ GFD+D A+ Sbjct: 1 MLLASLSVHAASVSART---------LHFGTSATYAPYEFVDADNKIVGFDIDVANAVCK 51 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + ++ + + +L+ K+ D + D T RE ++F Y Sbjct: 52 EM---QAECSFTNQSFDSLIPSLRFKKFDAVIAGMDMTPKRE--QQVSFSQPYYEGLSAV 106 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ +K + + L G + ++ GTT + L D P+ ++ + + Sbjct: 107 VVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYLNAFTDLKNN 162 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244 R + GD + A+ ++ I+ + S A+ +G+ ++ Sbjct: 163 RLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKGNDALLQEINAA 219 Query: 245 HYAMVTAEELG 255 + + E Sbjct: 220 LDKVKASPEYA 230 >gi|15802856|ref|NP_288883.1| histidine-binding periplasmic protein of high-affinity histidine transport system [Escherichia coli O157:H7 EDL933] gi|15832447|ref|NP_311220.1| histidine transport system histidine-binding periplasmic protein [Escherichia coli O157:H7 str. Sakai] gi|16130244|ref|NP_416812.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|26248697|ref|NP_754737.1| histidine-binding periplasmic protein [Escherichia coli CFT073] gi|74312826|ref|YP_311245.1| high-affinity histidine transport system histidine-binding periplasmic protein [Shigella sonnei Ss046] gi|82544790|ref|YP_408737.1| histidine-binding periplasmic protein of high-affinity histidine transport system [Shigella boydii Sb227] gi|89109129|ref|AP_002909.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|110642513|ref|YP_670243.1| histidine-binding periplasmic protein precursor [Escherichia coli 536] gi|157159349|ref|YP_001463653.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli E24377A] gi|157161796|ref|YP_001459114.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli HS] gi|168748161|ref|ZP_02773183.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC4113] gi|168755064|ref|ZP_02780071.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC4401] gi|168761250|ref|ZP_02786257.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC4501] gi|168767938|ref|ZP_02792945.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC4486] gi|168772962|ref|ZP_02797969.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC4196] gi|168780167|ref|ZP_02805174.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC4076] gi|168787219|ref|ZP_02812226.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC869] gi|168798482|ref|ZP_02823489.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC508] gi|170019382|ref|YP_001724336.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli ATCC 8739] gi|170081925|ref|YP_001731245.1| histidine/lysine/arginine/ornithine ABC transporter periplasmic-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|170680432|ref|YP_001744509.1| histidine ABC transporter periplasmic histidine-binding protein [Escherichia coli SMS-3-5] gi|187731129|ref|YP_001881131.1| histidine ABC transporter periplasmic histidine-binding protein [Shigella boydii CDC 3083-94] gi|188496222|ref|ZP_03003492.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli 53638] gi|191169474|ref|ZP_03031208.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli B7A] gi|191170231|ref|ZP_03031785.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli F11] gi|193062387|ref|ZP_03043482.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli E22] gi|193068140|ref|ZP_03049104.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli E110019] gi|194432830|ref|ZP_03065114.1| histidine ABC transporter, periplasmic histidine-binding protein [Shigella dysenteriae 1012] gi|195935688|ref|ZP_03081070.1| histidine/lysine/arginine/ornithine ABC transporter periplasmic-binding protein [Escherichia coli O157:H7 str. EC4024] gi|208807851|ref|ZP_03250188.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208812927|ref|ZP_03254256.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208819389|ref|ZP_03259709.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209398498|ref|YP_002271718.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC4115] gi|209919809|ref|YP_002293893.1| histidine ABC transporter substrate binding component [Escherichia coli SE11] gi|215487522|ref|YP_002329953.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|217326673|ref|ZP_03442756.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. TW14588] gi|218554865|ref|YP_002387778.1| histidine/lysine/arginine/ornithine ABC transporter periplasmic-binding protein [Escherichia coli IAI1] gi|218690469|ref|YP_002398681.1| histidine/lysine/arginine/ornithine ABC transporter subunit periplasmic-binding protein [Escherichia coli ED1a] gi|218695908|ref|YP_002403575.1| histidine/lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|218700785|ref|YP_002408414.1| histidine/lysine/arginine/ornithine ABC transporter subunit periplasmic-binding protein [Escherichia coli IAI39] gi|227887367|ref|ZP_04005172.1| histidine-binding periplasmic protein of high-affinity histidine transport system [Escherichia coli 83972] gi|238901484|ref|YP_002927280.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli BW2952] gi|253772767|ref|YP_003035598.1| cationic amino acid ABC transporter periplasmic binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162318|ref|YP_003045426.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli B str. REL606] gi|254794202|ref|YP_003079039.1| histidine/lysine/arginine/ornithine ABC transporter periplasmic-binding protein [Escherichia coli O157:H7 str. TW14359] gi|256017533|ref|ZP_05431398.1| histidine/lysine/arginine/ornithine transporter subunit, periplasmic-binding component of ABC superfamily protein [Shigella sp. D9] gi|256022006|ref|ZP_05435871.1| histidine/lysine/arginine/ornithine transporter subunit, periplasmic-binding component of ABC superfamily protein [Escherichia sp. 4_1_40B] gi|260844896|ref|YP_003222674.1| histidine/lysine/arginine/ornithine transporter subunit HisJ [Escherichia coli O103:H2 str. 12009] gi|260856353|ref|YP_003230244.1| histidine/lysine/arginine/ornithine transporter subunit HisJ [Escherichia coli O26:H11 str. 11368] gi|260869031|ref|YP_003235433.1| histidine/lysine/arginine/ornithine transporter subunit HisJ [Escherichia coli O111:H- str. 11128] gi|261223236|ref|ZP_05937517.1| histidine/lysine/arginine/ornithine transporter subunit, periplasmic-binding component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261259214|ref|ZP_05951747.1| histidine/lysine/arginine/ornithine transporter subunit HisJ [Escherichia coli O157:H7 str. FRIK966] gi|293415601|ref|ZP_06658244.1| histidine transport system substrate-binding protein [Escherichia coli B185] gi|300818088|ref|ZP_07098300.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 107-1] gi|300822183|ref|ZP_07102325.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 119-7] gi|300903699|ref|ZP_07121614.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 84-1] gi|300918519|ref|ZP_07135112.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 115-1] gi|300924578|ref|ZP_07140540.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 182-1] gi|300931333|ref|ZP_07146665.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 187-1] gi|300948542|ref|ZP_07162636.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 116-1] gi|300956423|ref|ZP_07168714.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 175-1] gi|300980889|ref|ZP_07175235.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 200-1] gi|300983442|ref|ZP_07176591.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 45-1] gi|301023556|ref|ZP_07187320.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 196-1] gi|301024140|ref|ZP_07187850.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 69-1] gi|301049067|ref|ZP_07196051.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 185-1] gi|301303229|ref|ZP_07209354.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 124-1] gi|301328810|ref|ZP_07221855.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 78-1] gi|301647588|ref|ZP_07247385.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 146-1] gi|306814579|ref|ZP_07448741.1| Histidine-binding periplasmic protein precursor [Escherichia coli NC101] gi|307138974|ref|ZP_07498330.1| Histidine-binding periplasmic protein precursor [Escherichia coli H736] gi|307311130|ref|ZP_07590774.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli W] gi|309793192|ref|ZP_07687620.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 145-7] gi|312967609|ref|ZP_07781824.1| histidine-binding periplasmic protein [Escherichia coli 2362-75] gi|312973431|ref|ZP_07787603.1| histidine-binding periplasmic protein [Escherichia coli 1827-70] gi|331642948|ref|ZP_08344083.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli H736] gi|331653752|ref|ZP_08354753.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli M718] gi|331669008|ref|ZP_08369856.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli TA271] gi|331673812|ref|ZP_08374575.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli TA280] gi|331678255|ref|ZP_08378930.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli H591] gi|331683980|ref|ZP_08384576.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli H299] gi|84028918|sp|P0AEU2|HISJ_ECO57 RecName: Full=Histidine-binding periplasmic protein; Short=HBP; Flags: Precursor gi|84028919|sp|P0AEU1|HISJ_ECOL6 RecName: Full=Histidine-binding periplasmic protein; Short=HBP; Flags: Precursor gi|84028920|sp|P0AEU0|HISJ_ECOLI RecName: Full=Histidine-binding periplasmic protein; Short=HBP; Flags: Precursor gi|12516668|gb|AAG57438.1|AE005463_1 histidine-binding periplasmic protein of high-affinity histidine transport system [Escherichia coli O157:H7 str. EDL933] gi|26109102|gb|AAN81305.1|AE016763_264 Histidine-binding periplasmic protein precursor [Escherichia coli CFT073] gi|1788648|gb|AAC75369.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|1799690|dbj|BAA16155.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|13362663|dbj|BAB36616.1| histidine transport system histidine-binding periplasmic protein [Escherichia coli O157:H7 str. Sakai] gi|73856303|gb|AAZ89010.1| histidine-binding periplasmic protein of high-affinity histidine transport system [Shigella sonnei Ss046] gi|81246201|gb|ABB66909.1| histidine-binding periplasmic protein of high-affinity histidine transport system [Shigella boydii Sb227] gi|110344105|gb|ABG70342.1| histidine-binding periplasmic protein precursor [Escherichia coli 536] gi|157067476|gb|ABV06731.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli HS] gi|157081379|gb|ABV21087.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli E24377A] gi|169754310|gb|ACA77009.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli ATCC 8739] gi|169889760|gb|ACB03467.1| histidine/lysine/arginine/ornithine transporter subunit; periplasmic-binding component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|170518150|gb|ACB16328.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli SMS-3-5] gi|187428121|gb|ACD07395.1| histidine ABC transporter, periplasmic histidine-binding protein [Shigella boydii CDC 3083-94] gi|187771186|gb|EDU35030.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC4196] gi|188017297|gb|EDU55419.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC4113] gi|188491421|gb|EDU66524.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli 53638] gi|189001988|gb|EDU70974.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC4076] gi|189357698|gb|EDU76117.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC4401] gi|189362875|gb|EDU81294.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC4486] gi|189368291|gb|EDU86707.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC4501] gi|189372805|gb|EDU91221.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC869] gi|189378999|gb|EDU97415.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC508] gi|190900476|gb|EDV60291.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli B7A] gi|190909747|gb|EDV69332.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli F11] gi|192932053|gb|EDV84652.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli E22] gi|192958419|gb|EDV88858.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli E110019] gi|194418818|gb|EDX34903.1| histidine ABC transporter, periplasmic histidine-binding protein [Shigella dysenteriae 1012] gi|208727652|gb|EDZ77253.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208734204|gb|EDZ82891.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208739512|gb|EDZ87194.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209159898|gb|ACI37331.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. EC4115] gi|209764878|gb|ACI80751.1| histidine transport system histidine-binding periplasmic protein [Escherichia coli] gi|209764880|gb|ACI80752.1| histidine transport system histidine-binding periplasmic protein [Escherichia coli] gi|209764882|gb|ACI80753.1| histidine transport system histidine-binding periplasmic protein [Escherichia coli] gi|209764886|gb|ACI80755.1| histidine transport system histidine-binding periplasmic protein [Escherichia coli] gi|209913068|dbj|BAG78142.1| histidine ABC transporter substrate binding component [Escherichia coli SE11] gi|215265594|emb|CAS09997.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|217319040|gb|EEC27465.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli O157:H7 str. TW14588] gi|218352640|emb|CAU98421.1| histidine/lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|218361633|emb|CAQ99227.1| histidine/lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI1] gi|218370771|emb|CAR18584.1| histidine/lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI39] gi|218428033|emb|CAR08952.2| histidine/lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli ED1a] gi|227835717|gb|EEJ46183.1| histidine-binding periplasmic protein of high-affinity histidine transport system [Escherichia coli 83972] gi|238861423|gb|ACR63421.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli BW2952] gi|242377942|emb|CAQ32711.1| hisJ, subunit of histidine ABC transporter [Escherichia coli BL21(DE3)] gi|253323811|gb|ACT28413.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974219|gb|ACT39890.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli B str. REL606] gi|253978386|gb|ACT44056.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli BL21(DE3)] gi|254593602|gb|ACT72963.1| histidine/lysine/arginine/ornithine transporter subunit, periplasmic-binding component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|257755002|dbj|BAI26504.1| histidine/lysine/arginine/ornithine transporter subunit HisJ [Escherichia coli O26:H11 str. 11368] gi|257760043|dbj|BAI31540.1| histidine/lysine/arginine/ornithine transporter subunit HisJ [Escherichia coli O103:H2 str. 12009] gi|257765387|dbj|BAI36882.1| histidine/lysine/arginine/ornithine transporter subunit HisJ [Escherichia coli O111:H- str. 11128] gi|260448597|gb|ACX39019.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli DH1] gi|281179395|dbj|BAI55725.1| histidine ABC transporter substrate binding component [Escherichia coli SE15] gi|284922297|emb|CBG35382.1| histidine ABC transporter, substrate-binding periplasmic protein [Escherichia coli 042] gi|291433249|gb|EFF06228.1| histidine transport system substrate-binding protein [Escherichia coli B185] gi|299880791|gb|EFI89002.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 196-1] gi|300299114|gb|EFJ55499.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 185-1] gi|300307702|gb|EFJ62222.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 200-1] gi|300316772|gb|EFJ66556.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 175-1] gi|300396684|gb|EFJ80222.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 69-1] gi|300404281|gb|EFJ87819.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 84-1] gi|300408530|gb|EFJ92068.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 45-1] gi|300414333|gb|EFJ97643.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 115-1] gi|300419209|gb|EFK02520.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 182-1] gi|300451952|gb|EFK15572.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 116-1] gi|300460838|gb|EFK24331.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 187-1] gi|300525313|gb|EFK46382.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 119-7] gi|300529232|gb|EFK50294.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 107-1] gi|300841403|gb|EFK69163.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 124-1] gi|300844810|gb|EFK72570.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 78-1] gi|301074278|gb|EFK89084.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 146-1] gi|305851973|gb|EFM52425.1| Histidine-binding periplasmic protein precursor [Escherichia coli NC101] gi|306908636|gb|EFN39133.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli W] gi|307554370|gb|ADN47145.1| histidine-binding periplasmic protein precursor [Escherichia coli ABU 83972] gi|308123478|gb|EFO60740.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 145-7] gi|309702621|emb|CBJ01950.1| histidine ABC transporter, substrate-binding periplasmic protein [Escherichia coli ETEC H10407] gi|310332026|gb|EFP99261.1| histidine-binding periplasmic protein [Escherichia coli 1827-70] gi|312287806|gb|EFR15711.1| histidine-binding periplasmic protein [Escherichia coli 2362-75] gi|315061602|gb|ADT75929.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli W] gi|315136944|dbj|BAJ44103.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli DH1] gi|315255246|gb|EFU35214.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 85-1] gi|315292286|gb|EFU51638.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 153-1] gi|315615578|gb|EFU96210.1| histidine-binding periplasmic protein [Escherichia coli 3431] gi|320174665|gb|EFW49798.1| Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ [Shigella dysenteriae CDC 74-1112] gi|320183765|gb|EFW58599.1| Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ [Shigella flexneri CDC 796-83] gi|320192067|gb|EFW66712.1| Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ [Escherichia coli O157:H7 str. EC1212] gi|320196177|gb|EFW70801.1| Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ [Escherichia coli WV_060327] gi|320199900|gb|EFW74489.1| Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ [Escherichia coli EC4100B] gi|320641137|gb|EFX10616.1| histidine ABC transporter substrate-binding protein HisJ [Escherichia coli O157:H7 str. G5101] gi|320646525|gb|EFX15444.1| histidine ABC transporter substrate-binding protein HisJ [Escherichia coli O157:H- str. 493-89] gi|320651622|gb|EFX20002.1| histidine ABC transporter substrate-binding protein HisJ [Escherichia coli O157:H- str. H 2687] gi|320657374|gb|EFX25176.1| histidine ABC transporter substrate-binding protein HisJ [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320667894|gb|EFX34802.1| histidine ABC transporter substrate-binding protein HisJ [Escherichia coli O157:H7 str. LSU-61] gi|323156460|gb|EFZ42615.1| histidine-binding periplasmic protein [Escherichia coli EPECa14] gi|323161646|gb|EFZ47531.1| histidine-binding periplasmic protein [Escherichia coli E128010] gi|323171992|gb|EFZ57636.1| histidine-binding periplasmic protein [Escherichia coli LT-68] gi|323176765|gb|EFZ62355.1| histidine-binding periplasmic protein [Escherichia coli 1180] gi|323184371|gb|EFZ69747.1| histidine-binding periplasmic protein [Escherichia coli 1357] gi|323187966|gb|EFZ73261.1| histidine-binding periplasmic protein [Escherichia coli RN587/1] gi|323377817|gb|ADX50085.1| cationic amino acid ABC transporter, periplasmic binding protein [Escherichia coli KO11] gi|323936599|gb|EGB32886.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1520] gi|323940994|gb|EGB37181.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E482] gi|323944822|gb|EGB40888.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H120] gi|323967750|gb|EGB63162.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli M863] gi|323977490|gb|EGB72576.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TW10509] gi|324006681|gb|EGB75900.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 57-2] gi|324013189|gb|EGB82408.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 60-1] gi|324020831|gb|EGB90050.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli MS 117-3] gi|324112846|gb|EGC06822.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia fergusonii B253] gi|324117813|gb|EGC11712.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli E1167] gi|325496651|gb|EGC94510.1| histidine-binding periplasmic protein of high-affinity histidine transport system [Escherichia fergusonii ECD227] gi|326339662|gb|EGD63473.1| Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ [Escherichia coli O157:H7 str. 1125] gi|326344124|gb|EGD67885.1| Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ [Escherichia coli O157:H7 str. 1044] gi|327252580|gb|EGE64239.1| histidine-binding periplasmic protein [Escherichia coli STEC_7v] gi|331039746|gb|EGI11966.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli H736] gi|331048601|gb|EGI20677.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli M718] gi|331064202|gb|EGI36113.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli TA271] gi|331069085|gb|EGI40477.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli TA280] gi|331074715|gb|EGI46035.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli H591] gi|331078932|gb|EGI50134.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli H299] gi|332088440|gb|EGI93558.1| histidine-binding periplasmic protein [Shigella boydii 5216-82] gi|332090192|gb|EGI95291.1| histidine-binding periplasmic protein [Shigella dysenteriae 155-74] gi|332093495|gb|EGI98553.1| histidine-binding periplasmic protein [Shigella boydii 3594-74] gi|332100893|gb|EGJ04239.1| histidine/lysine/arginine/ornithine transporter subunit [Shigella sp. D9] Length = 260 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 89/244 (36%), Gaps = 20/244 (8%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ G + F + G+ GFD+D + L I ++ ++ +L++K Sbjct: 28 IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKAK 84 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154 +ID + + T R +AF Y ++ K I +V L G + V GT Sbjct: 85 KIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGT 142 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T E +++ + + ++ + I + A R DA D A L ++ Sbjct: 143 TQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDY 200 Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + L + + D E ++ +A + A+ +++K Sbjct: 201 KFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKYF 253 Query: 270 NPDV 273 + DV Sbjct: 254 DFDV 257 >gi|283767497|ref|ZP_06340412.1| polar amino acid transport system substrate-binding protein [Staphylococcus aureus subsp. aureus H19] gi|283461376|gb|EFC08460.1| polar amino acid transport system substrate-binding protein [Staphylococcus aureus subsp. aureus H19] Length = 259 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 67/213 (31%), Gaps = 13/213 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + FV I + IL +++ K + G F+ +G G+D Sbjct: 1 MKRLLFVMIAFVFILAACGNNSSKDK-EASKDSKTINVGTEGTYAPFSFHDKDGKLTGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + K+++ + F L + + D+++ RE F Sbjct: 60 IDVIKAVAKE---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYK--FSK 114 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F ++ +K I + G + Q T+ LA A + Sbjct: 115 PYTFSSAVLVIRENEKDIKDFDDVKGKKLA-QTFTSNYGKLAKDKGA-----DITKVDGF 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 + + R D D + K Sbjct: 169 NQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAK 201 >gi|184155488|ref|YP_001843828.1| putative amino acid ABC transporter substrate binding component [Lactobacillus fermentum IFO 3956] gi|183226832|dbj|BAG27348.1| putative amino acid ABC transporter substrate binding component [Lactobacillus fermentum IFO 3956] Length = 276 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 93/270 (34%), Gaps = 29/270 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAE---VKAN 53 K + ++ ++ + S S + DIKK+G L G + + Sbjct: 4 KKWLKMLMVAALVVMGAVSLAGCSSSSDSSVQDIKKKGELVVGTSADYPPYEFQIVKNGK 63 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+DV ++ I ++++ + LQ+K+ D++ WT R Sbjct: 64 QQIVGYDVKLAHLIAKNIGVKK--VRFVNIAFPSLISELQNKKFDMVMAGMVWTKERAK- 120 Query: 114 LGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 ++F + GQ ++ K + S +S L GA++ Q + E Sbjct: 121 -AVSFSSTYHHGGQVLLVSKANENKYSGISALKGATLGAQQSSEQET-----IGKSLSGV 174 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK------SP 225 + + + +A D ++ A + P+++ I +I K P Sbjct: 175 KLVTESSITTLSQEVKAGTLDGLILAQTS--ADAFVAEHPNDYAIAKNITFKISAKTSDP 232 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + D +V+ T + EL Sbjct: 233 -RVVVRKSDKALLKVVNKTIKDAKKSGELD 261 >gi|17548702|ref|NP_522042.1| substrate-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17430950|emb|CAD17632.1| probable substrate-binding periplasmic (pbp) abc transporter protein [Ralstonia solanacearum GMI1000] Length = 255 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 75/223 (33%), Gaps = 13/223 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A +IK+ G L F + GF+++ +A+ + I++ Sbjct: 22 QARSYEEIKQSGKLIVATGGEFPPFNYFAGS-TLTGFEIEVAQAVVKKMG---LAIEWKT 77 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L+ LQ + D++ + T R + F Y G + I + + Sbjct: 78 LSFDSLLAGLQQNRWDLVISSHGVTEARAK--AVDFTSPHYCSGSSIVAR-DPAIRTAAD 134 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+ + VQ G+T + K F + + A + R DA+ D Sbjct: 135 LTDKVVAVQTGSTYLENVRKLAKPR----EIKNFPQDRDARTALSSGRADAWVTDK--FV 188 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 AL P + L + +A A+ +G+T + Sbjct: 189 ALAAIQSNPGAGLKLGSPLFVERIAAAVAKGNTALAASYNTAL 231 >gi|330872634|gb|EGH06783.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 247 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 77/248 (31%), Gaps = 24/248 (9%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L S S A + K GI F A+G GFD + +AL Sbjct: 1 MLIAAATLAFSGSAFAETM---------KMGIEGAYPPFNNKDASGQVVGFDYEIGQALC 51 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + + + + + AL + + D L + T R+ + F Y + Sbjct: 52 ARMKVECEAVT---SDWDGIIPALMANKFDFLISSLSITEERK--QVVDFTNPYYSNKLQ 106 Query: 129 FIMHKKKGIS------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 FI K I + L+G S+ Q T L D +++ E Sbjct: 107 FIAPKTSSIDVSSTEKAKESLAGKSVGAQRSTLAATWLEDKLG----IMDAKLYDTQENA 162 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + R DA D + + + ++ + A+ +GD ++ Sbjct: 163 FLDLSSGRVDAMLADKYVSFEWLKSEAGQNFEFKGEPVVEDDKIGIAVRKGDDALRERLN 222 Query: 243 WTHYAMVT 250 ++ Sbjct: 223 AALKEIIA 230 >gi|254493284|ref|ZP_05106455.1| amino acid permease substrate-binding protein [Neisseria gonorrhoeae 1291] gi|268596419|ref|ZP_06130586.1| amino acid ABC transporter [Neisseria gonorrhoeae FA19] gi|268600902|ref|ZP_06135069.1| amino acid permease substrate-binding protein [Neisseria gonorrhoeae PID18] gi|291044288|ref|ZP_06569997.1| amino acid ABC transporter [Neisseria gonorrhoeae DGI2] gi|226512324|gb|EEH61669.1| amino acid permease substrate-binding protein [Neisseria gonorrhoeae 1291] gi|268550207|gb|EEZ45226.1| amino acid ABC transporter [Neisseria gonorrhoeae FA19] gi|268585033|gb|EEZ49709.1| amino acid permease substrate-binding protein [Neisseria gonorrhoeae PID18] gi|291011182|gb|EFE03178.1| amino acid ABC transporter [Neisseria gonorrhoeae DGI2] Length = 275 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 68/224 (30%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L + + S++ I +G + G Sbjct: 2 MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAISGSLIERINNKGTVTVGTEGTYAP 61 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 62 FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 118 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + H I S++ + G + KA Sbjct: 119 T-SPERQATFDKSEPYSWSGAVLVAHNDSNIKSIADIKGVKTAQSLTSNYGE------KA 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 172 KAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215 >gi|169343527|ref|ZP_02864526.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens C str. JGS1495] gi|169298087|gb|EDS80177.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens C str. JGS1495] Length = 519 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 90/246 (36%), Gaps = 13/246 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 F++I L+++ + + +I + + + + F + G+ KGF+VD Sbjct: 26 FLTISILMMVLVGCSNNSNNIQKNSTNKEKITVATSGTYYPFTFL-EGGELKGFEVDVWN 84 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 + + D +++ + F L+S +++ ++ T RE F + Sbjct: 85 EIGKRLGYD---VEFKTASFSGLFGMLESGKVNTIANQITVTPEREE--KYYFSEPYVYS 139 Query: 126 GQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 G I+ K I S L G + V G+ E + D K N + + ++ + Sbjct: 140 GAQIIVKKGNDSIKSFDDLKGKKVGVDLGSNYEKMVKD--KDENNEIKILTYQNTDAAFN 197 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD--TEWYNIVS 242 R DA D + A+ ++ + + I K A ++ + + V+ Sbjct: 198 ELLLGRIDAVVIDRVS--AIAAIKEKDLNLQLAGEPIDKIENAYPFVKDEKGKDLSENVN 255 Query: 243 WTHYAM 248 M Sbjct: 256 KALDEM 261 >gi|158421866|ref|YP_001523158.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] gi|158328755|dbj|BAF86240.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] Length = 282 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 100/284 (35%), Gaps = 27/284 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + +S+LC+ + + + L I+ R ++ + T + V + +G Sbjct: 20 MDRRSILSLLCVSAMLGLAAPAAHAEDALEAIQSRKAVRIAVPTDYPPYGFVGPDLKPQG 79 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D+D + + ++ +P+++ R LQ+ ++D++ RE L F Sbjct: 80 LDIDMAELIGKKMGVK---VELVPVSSANRIPYLQTGKVDLVISTLGKNAEREKV--LDF 134 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Q K + + ++G S+ V G + L +E Sbjct: 135 SSAYAPFYQAVFGGKSVPVKAPGDMAGHSVAVTRGAMEDQELEKVTP---PGVTVKRYED 191 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 AAY A + + S+ A + P + +I +SP I +G+ Sbjct: 192 NAATAAAYVAGQTELVAI--SSAAAGTIMMKNPQTNTEFKFLIKESPCFIGIAKGEDTLK 249 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKS 282 V+ + AE I+ +SK ++LG + Sbjct: 250 AKVN-----AIIAEAKK--DGTIDAMSK--------KWLGREAG 278 >gi|311071019|ref|YP_003975942.1| cystine ABC transporter substrate-binding lipoprotein [Bacillus atrophaeus 1942] gi|310871536|gb|ADP35011.1| cystine ABC transporter (substrate-binding lipoprotein) [Bacillus atrophaeus 1942] Length = 268 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 39/263 (14%), Positives = 77/263 (29%), Gaps = 26/263 (9%) Query: 1 MYKDFFVSILCLIILFFTSF-----------STNASILGDIKKRGFLKCGINTGLVGFAE 49 M K FF + + + + ++ + IK++G L G F Sbjct: 1 MKKAFFALCMMVSFAVLAACGSSSDNGSKDNAKDSDLWASIKEKGVLTVGTEGTYEPFTY 60 Query: 50 VKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 G+DV+ + + + F L SK+ D+++ T Sbjct: 61 HDKKTDKLTGYDVEVITEAAKRLGLKAE---FKETQWDSMFAGLNSKRFDVIANQVGKT- 116 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAH 167 + F + K I+S + + G + Q+ T+ LA+ A Sbjct: 117 --DREGKYDFSDKYTTSNAVVVTKKNNKDITSEADVKGKTSA-QSLTSNYNQLAEKAGAK 173 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + + R D D A+ T+ + + + Sbjct: 174 VEGIE-----GMAQAFQLIQQGRVDMTYNDKLAVLNYLKTSGNKNLKIAFETGDPQDTF- 227 Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250 A +G E + V+ M Sbjct: 228 FAFRKGSGELTDQVNKALKEMKE 250 >gi|262173971|ref|ZP_06041648.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio mimicus MB-451] gi|261891329|gb|EEY37316.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio mimicus MB-451] Length = 243 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 84/260 (32%), Gaps = 31/260 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L+ + +K + F + N +GFD Sbjct: 1 MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + AL+ K+ D D T R ++F Sbjct: 48 VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVSFSN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ ++ + L G + VQ G+T + L + + + + Sbjct: 103 PYYDNSAAFVSLAG-KVADQAALKGKRVGVQNGSTHQSFLLEQLP----DVVAVPYSSWQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + + R D+ GD + + + + + ++ + A+ + + Sbjct: 158 DAFIDMKNGRIDSVFGDTAVIAEW---FKGDNNLTYVGERVTNAQYFGNGFGIAVNKDNQ 214 Query: 236 EWYNIVSWTHYAMVTAEELG 255 + ++ A+ E Sbjct: 215 ALVDQLNAALEAVKENGEYA 234 >gi|229916229|ref|YP_002884875.1| extracellular solute-binding protein family 3 [Exiguobacterium sp. AT1b] gi|229467658|gb|ACQ69430.1| extracellular solute-binding protein family 3 [Exiguobacterium sp. AT1b] Length = 263 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 88/261 (33%), Gaps = 19/261 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANG-- 54 M K F L + F + + S D + + G + + V Sbjct: 1 MKKGFLALCLAGLAAFSVACGADVNEGGSTSTDGEDDKVIVMGTSADYFPYEFVDTANGD 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD+D + ++ + + ++ ++ AL + ++D + T R+ Sbjct: 61 EIVGFDIDIAKKVAENMGYE---LKIEDMDFGSLLGALNAGRVDFVMAGMTPTEERKE-- 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F I + + K + S+ L G I VQ G+ E D + Sbjct: 116 NADFSDIYFTAVNLILS-KDDSLQSLEDLKGKKIGVQLGSIQEGIAQDQI----TDAEIV 170 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 ++ EI + R DA + + + + I+ + + S A A + D Sbjct: 171 SLNKIPEIIQEIKTGRIDAMVIEDTVAKKYLEQDSELTTFEIVDEEEAGS--AAAFRK-D 227 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 E + + M+ + E+ Sbjct: 228 DELRDQFNEELKKMIDSGEIE 248 >gi|253681237|ref|ZP_04862035.1| amino acid ABC transporter, substrate-binding protein [Clostridium botulinum D str. 1873] gi|253562475|gb|EES91926.1| amino acid ABC transporter, substrate-binding protein [Clostridium botulinum D str. 1873] Length = 276 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 98/292 (33%), Gaps = 34/292 (11%) Query: 1 MYK-DFFVSILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGLVGFAE 49 M K I+C ++L + N + IKK G L G + Sbjct: 1 MLKGKKLKFIICSLMLTMGATVFVGCGNKNQGKNIPKIEQIKKSGKLVLGTCADYPPYEV 60 Query: 50 ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + GFD+D + ++ + ++ ++ L+++S ++D++ + Sbjct: 61 HKVKDGKDEIVGFDIDIAKEIAKDLGVK---LEIKDMDFDPLVLSVKSGKVDLVLSGMNP 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYF 164 T RE + F I Y Q I+ K + ++ LSG I Q + E + Sbjct: 118 TPAREK--EIDFSKIYYRAKQSVIIRKDDKDKLKNLETLSGKKIGAQITSLQEKIAKEEI 175 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 K N I +V E+ + + DA + A + Sbjct: 176 KGAN----VISLGKVNELVLGLKGKKTDAVIVEEPVAKAYVAKYPELMIAN-INVGKPNE 230 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 A I +G ++ + V+ T + KN Q D + +++ Sbjct: 231 GSAVGIQKGSKDFLDSVNKTID--------RLNSKNEIQKMIDKASEELKEL 274 >gi|296329885|ref|ZP_06872369.1| putative ABC transporter (binding lipoprotein) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676611|ref|YP_003868283.1| putative ABC transporter binding lipoprotein [Bacillus subtilis subsp. spizizenii str. W23] gi|296152924|gb|EFG93789.1| putative ABC transporter (binding lipoprotein) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414855|gb|ADM39974.1| putative ABC transporter (binding lipoprotein) [Bacillus subtilis subsp. spizizenii str. W23] Length = 264 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 79/248 (31%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + +L S N + + L G FA NG GFD Sbjct: 1 MKKKKWTVLFVAALLAVLSACGNGNSSSK-EDDNVLHVGATGQSYPFAYK-ENGKLTGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A++ I K+ + L LQ+ ++D +S T R+ F Sbjct: 59 VEVMEAVAKKI---DMKLDWKLLEFSGLMGELQTGKLDTISNQVAVTDERKEM--YHFTE 113 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G ++ K I SV L G ++ G+ L + + +E Sbjct: 114 PYAYAGTQIVVKKDNHDIKSVDDLKGKTVAAVLGSNHAKNLESKDPDKKI--NIKTYETQ 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD--TEW 237 E R DAY + L A P + D I +A + D + Sbjct: 172 EGTLKDVAYGRVDAYVNSRTVLIAQMKKTGLP--LKLAGDPIVYEQVAFPFAKDDAHDKL 229 Query: 238 YNIVSWTH 245 V+ Sbjct: 230 RKKVNKAL 237 >gi|194098107|ref|YP_002001155.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria gonorrhoeae NCCP11945] gi|268594422|ref|ZP_06128589.1| amino acid ABC transporter [Neisseria gonorrhoeae 35/02] gi|268681689|ref|ZP_06148551.1| amino acid permease substrate-binding protein [Neisseria gonorrhoeae PID332] gi|268683916|ref|ZP_06150778.1| amino acid permease substrate-binding protein [Neisseria gonorrhoeae SK-92-679] gi|193933397|gb|ACF29221.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria gonorrhoeae NCCP11945] gi|268547811|gb|EEZ43229.1| amino acid ABC transporter [Neisseria gonorrhoeae 35/02] gi|268621973|gb|EEZ54373.1| amino acid permease substrate-binding protein [Neisseria gonorrhoeae PID332] gi|268624200|gb|EEZ56600.1| amino acid permease substrate-binding protein [Neisseria gonorrhoeae SK-92-679] gi|317163838|gb|ADV07379.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Neisseria gonorrhoeae TCDC-NG08107] Length = 275 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L + + S++ I +G + G Sbjct: 2 MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAISGSLIERINNKGTVTVGTEGTYAP 61 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 62 FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 118 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + I S++ + G + KA Sbjct: 119 T-SPERQATFDKSEPYSWSGAVLVARNDSNIKSIADIKGVKTAQSLTSNYGE------KA 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 172 KAAGAQLVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215 >gi|66047101|ref|YP_236942.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae B728a] gi|63257808|gb|AAY38904.1| extracellular solute-binding protein, family 3 [Pseudomonas syringae pv. syringae B728a] Length = 260 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 93/276 (33%), Gaps = 29/276 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + + K+ L+ G++ F A+G GFD Sbjct: 1 MKKAWLTLSALAL------CIAAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + K +++ + L++++ D + + T RE + F Sbjct: 53 IDLGNAICKEL---KVKCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IYFSN 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K G + + L G ++ + GT E + + Sbjct: 108 ELFSGPTSLVFKKGAGFTADPASLKGKTVGYEQGTIQEAYAKAVLDKAGISTK--AYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +++ + + R DA D+ L + +++ + I D+E Sbjct: 166 DQVYSDLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPI-------------DSELLP 212 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 + A E + K I + KD T ++Q+ Sbjct: 213 AKTAIGIAQGNKELKALLDKGIEAMHKDGTYAEIQK 248 >gi|282917763|ref|ZP_06325513.1| polar amino acid transport system substrate-binding protein [Staphylococcus aureus subsp. aureus D139] gi|282318048|gb|EFB48408.1| polar amino acid transport system substrate-binding protein [Staphylococcus aureus subsp. aureus D139] Length = 259 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 67/213 (31%), Gaps = 13/213 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + FV I + IL +++ K + G F+ +G G+D Sbjct: 1 MKRLLFVMIAFVFILAACGNNSSKDK-EASKDSKTINVGTEGTYAPFSFHDKDGKLTGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + K+++ + F L + + D+++ RE F Sbjct: 60 IDVIKAVAKE---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYK--FSK 114 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F ++ +K I + G + Q T+ LA A + Sbjct: 115 PYTFSSAVLVIRENEKDIKDFDDVKGKKLA-QTFTSNYGKLAKDKGA-----DITKVDGF 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 + + R D D + K Sbjct: 169 NQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAK 201 >gi|119871871|ref|YP_929878.1| extracellular solute-binding protein [Pyrobaculum islandicum DSM 4184] gi|119673279|gb|ABL87535.1| extracellular solute-binding protein, family 3 [Pyrobaculum islandicum DSM 4184] Length = 270 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 77/235 (32%), Gaps = 12/235 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L IKKRG L G + + V +G G D+D R ++ ++ +++ + Sbjct: 40 SLDLIKKRGKLIVGTSADWPPYEYV-ESGKIVGIDIDIARRIADSLG---VQLEIRDMKF 95 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 A++ +D + + T RE + F D ++ K I SV L G Sbjct: 96 SALIEAVRKGDVDFVIADMAITPEREK--QVLFSIPYQVDSSTVVVKKGTQIRSVEDLRG 153 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 +I VQ GT E N + A R DA A+ Sbjct: 154 KTIGVQVGTVQEDWAVRTLG--NYSKIVRYDRVYPYMVEALRKGDVDAIVVGGVVGDAVV 211 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 + + S A A+ + V Y M+ + E+ N Sbjct: 212 KRFPEFEKAFSVGVRYS----AVAMPICAYDLKLQVDKVIYDMLQSGEMERLINN 262 >gi|186476289|ref|YP_001857759.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184192748|gb|ACC70713.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 260 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 72/255 (28%), Gaps = 15/255 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ L+ + + + A L IK G LK G F A+ GFD Sbjct: 1 MKSIRSLLLIGLLQVATATAAFAADDLAKIKSAGALKIGTEGTYAPFTYHDASNQLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ RA++ + ++ L + + D + T R F Sbjct: 61 VEIGRAIAQKLGVKAE---FIEGKWDGLIAGLDANRYDAVINEVAVTDAR--KQKYDFSE 115 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I+ I L G + A + + Sbjct: 116 PYIVSHAALIVRSDNSSIKGFDDLKGKKSANTLTSNFGKIAAA------HGAEVVPVQGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI--ISKSPLAPAIIQGDTEW 237 E + R DA D + K + + S A I +G+ E Sbjct: 170 NESIDLLTSGRVDATVNDSLSFLDFKKHKPDAKVKIAAVETASDSSDHSAVLIRKGNPEL 229 Query: 238 YNIVSWTHYAMVTAE 252 ++ A + A+ Sbjct: 230 QAAINKAL-AEIKAD 243 >gi|330876939|gb|EGH11088.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 218 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 76/222 (34%), Gaps = 16/222 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L + + K+ L+ G++ F A+G GFD Sbjct: 1 MKKAWLTLSAVALCL------AAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +++ + L++++ D + + T RE + F Sbjct: 53 IDLGNAICKEL---KVTCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IDFSN 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K G ++ L G ++ + GT E + + Sbjct: 108 ELFSGPTSLVFKKGAGFTADKASLKGKTVGYEQGTIQEAYAKAALDKAGVSTK--AYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 +++ A + R DA D+ L + +++ + I Sbjct: 166 DQVYADLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPID 207 >gi|325266777|ref|ZP_08133450.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Kingella denitrificans ATCC 33394] gi|324981779|gb|EGC17418.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Kingella denitrificans ATCC 33394] Length = 272 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 39/266 (14%), Positives = 86/266 (32%), Gaps = 21/266 (7%) Query: 4 DFFVSILCLIILFFTSFS-------------TNASILGDIKKRGFLKCGINTGLVGFAEV 50 + +I+ L T+ S L+ +N F + Sbjct: 5 KWLSTIVSCAALALTACGGQSSGTAPAANAEAGGSSASAPASGKVLRVAMNAEFAPFESL 64 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 A +GFDVD A++ A ++++ F AL +D++ T R Sbjct: 65 DAQQKIEGFDVDLMNAMAKAGG---FQVEFQHKPWDSLFPALAQGDVDVVMSAVTITDDR 121 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNM 169 + ++ F Y Q ++ K +++++ + + + G T + F A Sbjct: 122 KETM--DFSEPYYQINQVVLVAPGKKVANINDVRSLSKVGAVTGHTGDFAAQKIFGA--T 177 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 F+ + + DA D + + N+ ++ + A Sbjct: 178 SETIARFKTLPLMLKEVENGGVDAGISDSAVVANYVKNNEGKGFTMVQVPDFTVEHYGIA 237 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255 + +G+ E N ++ + + E Sbjct: 238 VRKGNQELLNRLNAALKQVRDSGEYK 263 >gi|184156275|ref|YP_001844615.1| amino acid ABC transporter substrate-binding component [Lactobacillus fermentum IFO 3956] gi|260662493|ref|ZP_05863388.1| amino acid ABC transporter substrate-binding component [Lactobacillus fermentum 28-3-CHN] gi|183227619|dbj|BAG28135.1| amino acid ABC transporter substrate-binding component [Lactobacillus fermentum IFO 3956] gi|260553184|gb|EEX26127.1| amino acid ABC transporter substrate-binding component [Lactobacillus fermentum 28-3-CHN] Length = 266 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 37/255 (14%), Positives = 75/255 (29%), Gaps = 23/255 (9%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKK-----RGFLKCGINTGLVGFAEVKANG 54 M K +S++ ++ + + + +G L G+ ++ NG Sbjct: 1 MKKWMKRLSVVAASLVAMVALAACGKSSSSSSEPQLVTKGTLTVGLEGTYAPYSYR-ENG 59 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GF+VD R L+ + ++++P + SK+ D+ + T R+ Sbjct: 60 KLTGFEVDLARDLAKKMGYK---VKFVPTKWDSLIAGVGSKKFDVAINDIAMTPERQK-- 114 Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + IM I S+ + G I GT + Sbjct: 115 SYLFSTPYIYSKSALIMKSDNTTIKSIDDIKGKKIAAATGTANAQNVK------KFGGET 168 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP---LAPAI 230 + R R +A A + ++ SK P + + Sbjct: 169 VSSTDFSTAMELVRQGRAEAALNSKEAFL-YYQKSTGATDLKYQEVPSSKIPVQKIGVLM 227 Query: 231 IQGDTEWYNIVSWTH 245 + + V+ Sbjct: 228 AKNNKGLQTKVNKAL 242 >gi|298346992|ref|YP_003719679.1| amino acid ABC transporter ATP-binding protein [Mobiluncus curtisii ATCC 43063] gi|298237053|gb|ADI68185.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Mobiluncus curtisii ATCC 43063] Length = 275 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 31/245 (12%), Positives = 70/245 (28%), Gaps = 12/245 (4%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKR--GFLKCGINTGLVGFAEVKAN-GDWKGFDVD 62 F L + + + ++ K G + + G++ GFD+D Sbjct: 13 FALAFSLAGCGGAASNNAGNAGDNVAKSAGDKFVVGFDANFPPYGYKDEKTGEYTGFDMD 72 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 ++ + ++ P++ + + L S +D L + + Sbjct: 73 LATEVAKR---NHWTLEKKPIDWDSKDMQLSSGSVDCLWNGFTMNGREDK---YTWSKPY 126 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH--NMKYHPIVFERVE 180 + F+ + + L+G ++ VQA ++ L D Sbjct: 127 VDNSIVFVTRSADNLKDAADLAGKTVIVQADSSGLAALEDESNKELLASFKTLNKVPDYN 186 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A DA D+ T + + I+ + G+ + Sbjct: 187 NAFMSLEAGAADAVVVDLGVANYQLETRQKGM-YTIMEKPVQTEQYGIGFKLGNKALRDQ 245 Query: 241 VSWTH 245 V T Sbjct: 246 VQTTL 250 >gi|259909374|ref|YP_002649730.1| Putative amino acid ABC transporter, substrate binding protein [Erwinia pyrifoliae Ep1/96] gi|224964996|emb|CAX56524.1| Putative amino acid ABC transporter, substrate binding protein [Erwinia pyrifoliae Ep1/96] gi|283479446|emb|CAY75362.1| putative ABC transport system, periplasmic component [Erwinia pyrifoliae DSM 12163] Length = 261 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 82/226 (36%), Gaps = 14/226 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 A L DI+KRG L+ + F V + +G+D+D L+ + K+Q + Sbjct: 21 ARADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMATYLARQM---KLKLQLV 77 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ + R LQ+ ++D++ + RE + F G ++ + S + Sbjct: 78 PVTSANRVPYLQTDKVDLVISSLGKNPEREKV--IDFSRAYAPFFLGVFGPQQGTLKSAA 135 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +LSG S+ V G ++ L +E +AY + + + Sbjct: 136 ELSGKSVGVTRGAVEDMVLTSVVPK---DAQVKRYEDNNTTLSAYLSGQVQYVATGNLVV 192 Query: 202 YALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A+ N P +L D P I +G+ V Sbjct: 193 AAIARQNADKAPLAQFMLKDS----PCFIGIKKGEPALKAKVDALI 234 >gi|26991172|ref|NP_746597.1| cationic amino acid ABC transporter, periplasmic binding protein [Pseudomonas putida KT2440] gi|24986217|gb|AAN70061.1|AE016645_7 basic amino acid ABC transporter, periplasmic basic amino acid-binding protein [Pseudomonas putida KT2440] gi|313497723|gb|ADR59089.1| Cationic amino acid ABC transporter, periplasmic binding protein [Pseudomonas putida BIRD-1] Length = 261 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 82/254 (32%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L + S + LK GI FA + +G GFD Sbjct: 1 MKKLALLGALALSVFSLVSQAAEKP----------LKIGIEAAYPPFAFKQPDGSIAGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + +K ++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCEEM---KTKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTK 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M +S L G I VQ G+ + + A + + Sbjct: 106 RYYLTPARLVMKDGTTVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKG--ATVVPYGTQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 EI A R D D + L L D + + + A+ +GD Sbjct: 164 NEIYLDVAAGRLDGTVADATLLEDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGD 223 Query: 235 TEWYNIVSWTHYAM 248 + ++ A+ Sbjct: 224 KANVDRINAAIDAI 237 >gi|319941414|ref|ZP_08015742.1| hypothetical protein HMPREF9464_00961 [Sutterella wadsworthensis 3_1_45B] gi|319805034|gb|EFW01864.1| hypothetical protein HMPREF9464_00961 [Sutterella wadsworthensis 3_1_45B] Length = 251 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 77/232 (33%), Gaps = 14/232 (6%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 + R L+ G F + + GFD+D RA+ D +Q L + Sbjct: 21 AAAQARDLLRVGTEPTFAPFEFLDTQTKDYTGFDMDLIRAVGQKAGFD---VQILNMGFD 77 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLS 144 AL + +D+++ T R+ + F Y G ++H+ + L Sbjct: 78 ALIPALMTGNVDVVAAGVSITPERQK--RVDFTTPYYTSGLSMLIHRTDAEKFKTFDDLK 135 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 + VQ GTT D A F E +H A D L Sbjct: 136 NQRLAVQIGTTGADKAKDIQGAK-----VSSFNTTSEAFMDLLSHNASAVVLDRPVLAYY 190 Query: 205 KLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + ++ + +P I + +G+T + ++ + + + E+ Sbjct: 191 LKNQPKAAQQLTIPPYIADAEEFGFCVKKGNTALLDKLNKAYAELKASGEVD 242 >gi|314934022|ref|ZP_07841387.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus caprae C87] gi|313654172|gb|EFS17929.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus caprae C87] Length = 485 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 91/286 (31%), Gaps = 30/286 (10%) Query: 1 MYKDFFVSILCLIILFFT-------SFSTNASILGDIKKRGFLKCGINTGLVGFAE---V 50 MYK + I+ ++L + S IK+RG L+ G++ Sbjct: 1 MYKIIKILIVITLLLGSAITYINPIVSAEEDSNWNKIKQRGELRVGLSADYAPLEFEKIK 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 D+ G D++ + ++ + K++ + + AL++ +ID++ T R Sbjct: 61 NGKTDYAGVDIELAKKIAKD---NHLKLKIINMQFDSLLGALKTGKIDVIISGMTTTPER 117 Query: 111 EISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 + + F ++ K + +G I Q GT E + K Sbjct: 118 KK--EVDFTEPYMMTNNVMLVKKSDKNKYKDLKDFTGKKIAAQKGTDQEKIAHNEIK--- 172 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 R+ E A ++ + + A N E + K P Sbjct: 173 -DSQVSSLNRLPESILALKSGKVVGTIVEKPVGEAYLKQNPE-LEFADVKFNEEKKPTCI 230 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 A+ + ++ T + KN+ + D+Q Sbjct: 231 AVPKNSPILLKHLNQTID--------EVNNKNLIDKYMNQAAQDMQ 268 >gi|146306132|ref|YP_001186597.1| extracellular solute-binding protein [Pseudomonas mendocina ymp] gi|145574333|gb|ABP83865.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas mendocina ymp] Length = 254 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 81/254 (31%), Gaps = 26/254 (10%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 +LCL + T G L+ + F E+ A G+ GF+VD Sbjct: 1 MLRMLLCLFAVLLAQPGTA----------GPLRVAMEGQFPPFEELDAQGNLVGFNVDIA 50 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 AL + + ++ + AL + + D++ + T R + F Sbjct: 51 NALCQRMQRECELQRF---AWDDLIPALDAGRADLILASMSITAARAE--RVDFTARYAQ 105 Query: 125 DGQGFIMHK---KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 F K + + + +++G + VQ GTT E L F H + + + Sbjct: 106 TPAFFFARKGHINQMLITPRRIAGKRVGVQQGTTYERFLEARFAEH---VQLLRYPSAAQ 162 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-----ISKSPLAPAIIQGDTE 236 A D D + Y L + + + A+ +GD E Sbjct: 163 AYRALAGGELDLVLDDAVSGYFGFLLTELGRDFEQVGGPVVAPQFFGQGQGIAVRKGDDE 222 Query: 237 WYNIVSWTHYAMVT 250 + A++ Sbjct: 223 LREQLDRALAAILA 236 >gi|57234794|ref|YP_181164.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Dehalococcoides ethenogenes 195] gi|57225242|gb|AAW40299.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Dehalococcoides ethenogenes 195] Length = 260 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 38/261 (14%), Positives = 81/261 (31%), Gaps = 27/261 (10%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNASIL-------GDIKKRGFLKCGINTGLVGFAEVK 51 M + +S++ L F+ ++ I+ + + F V Sbjct: 1 MKRLSTILMSLILSGALLFSGCQSSTDDTDDNDDSTAKIQ----VTVVTDATWPPFEYVN 56 Query: 52 ANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 +GFD+D +A++ ++ + + L + Q + + R Sbjct: 57 EQTHAIEGFDIDLMKAIAEK---GNLEVTFQNVAWDALLAGLATGQYKVAISSITINAER 113 Query: 111 EISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 F + GQ + K I S + L+G + Q GTT + A Sbjct: 114 AE--KWLFSDPYFNAGQMVCVQKNNTTILSHNDLTGKKVAAQTGTTGFIEAQKIEGA--- 168 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 ++ + + DA D A+ N P + + + + Sbjct: 169 --TVKSYDEIGLAFQDLMNGQIDAVICDTP--VAIDYVNANPDKIKKVGTAFTDEFYGIS 224 Query: 230 IIQGDTEWYNIVSWTHYAMVT 250 + +G TE ++ A++ Sbjct: 225 VAKGQTEILARINQGLAAVIA 245 >gi|148547400|ref|YP_001267502.1| extracellular solute-binding protein [Pseudomonas putida F1] gi|148511458|gb|ABQ78318.1| extracellular solute-binding protein, family 3 [Pseudomonas putida F1] Length = 250 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 72/213 (33%), Gaps = 8/213 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ F V A+ GFDVD AL + + + + + AL + Sbjct: 23 TLRFATEGAYPPFNYVDADNKLHGFDVDITHALCEQMKVE---CTLVAQDWEGIIPALMA 79 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS-QLSGASICVQAG 153 ++ D + + T R +AF Y + K I S G ++ Q+ Sbjct: 80 RKYDAVVASMIDTEERRK--KIAFTDHYYRTPLTVAVAKDSKIDSAQTDFVGYTVGAQSS 137 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T + D + ++ ++E +A A R D D L+ N Sbjct: 138 STQAIYAEDVYGKAGAD--VKLYPTMDEANADLAAGRLDGVIADKFPLHEWMNKNGGDCC 195 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 ++ +K+ A A+ + D ++ Sbjct: 196 KILGDVADTKADAAIAVRKDDEALRQRLNTALQ 228 >gi|87122518|ref|ZP_01078397.1| probable periplasmic binding protein [Marinomonas sp. MED121] gi|86162160|gb|EAQ63446.1| probable periplasmic binding protein [Marinomonas sp. MED121] Length = 251 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 74/234 (31%), Gaps = 19/234 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K S L L + A ++ F + + G +GFDV Sbjct: 4 KKLALGSALVLGAALTSVSGIAAD---------KVRLATEGAWAPFNFIDSAGKPQGFDV 54 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D AL + + D + + + L+ ++ D + + T R + F Sbjct: 55 DVAWALCAKMKAD---CEVVTQDWDGLIPGLKVRKFDAIIASMSITEERLKV--VDFTNK 109 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G F+ K +++ L G I Q T L D F ++ + Sbjct: 110 YYSGGLRFLGLKG-EAFNIADLKGKVIGAQRATLGAQYLEDNFADL---ATLKFYDNQDN 165 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGD 234 + A R D D + T+ + D K +A A+ +GD Sbjct: 166 VYLDLVAGRLDVVLSDELPTFDWLKTSGNGDKFEFKGDAFLKEDNIAIAVRKGD 219 >gi|312882265|ref|ZP_07742011.1| prephrenate dehydratase [Vibrio caribbenthicus ATCC BAA-2122] gi|309370109|gb|EFP97615.1| prephrenate dehydratase [Vibrio caribbenthicus ATCC BAA-2122] Length = 258 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 79/245 (32%), Gaps = 14/245 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K FV LCLI + + + S L I G L+ G + +KGF Sbjct: 1 MRKSLFVLGLCLISIMQVAHAQ--SRLQSILDNGVLRVGTTGDWNPMSVKDPTTNRYKGF 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D L+ + ++Y+ + K + + + D +S + + R G + Sbjct: 59 DIDVTTELAKDLGVK---VEYVATDWKTLVNGITADKYD-ISGSASLNMSRAKVAGYSQA 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFE 177 S S + V A T E + +F + IV E Sbjct: 115 YFYLAFVPVVQKKDLTNFSDWSDFDKPEVRVAATLGTVQEKMVKSFFPSAQH----IVIE 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A R D L + V + + +P+A + Q D W Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVAKFKQ-LAVVPVQKLRKPTPIAMLMPQDDQVW 229 Query: 238 YNIVS 242 N V+ Sbjct: 230 INYVN 234 >gi|268603208|ref|ZP_06137375.1| amino acid permease substrate-binding protein [Neisseria gonorrhoeae PID1] gi|268587339|gb|EEZ52015.1| amino acid permease substrate-binding protein [Neisseria gonorrhoeae PID1] Length = 275 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 68/224 (30%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFFTS--------------FSTNASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L + + S++ I +G + G Sbjct: 2 MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQAAISGSLIERINNKGTVTVGTEGTYAP 61 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 62 FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 118 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + H I S++ + G + KA Sbjct: 119 T-SPERQATFDKSEPYSWSGAVLVAHNDSNIKSIADIKGVKTAQSLTSNYGE------KA 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 172 KAAGAQLVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215 >gi|330897281|gb|EGH28700.1| arginine/ornithine ABC transporter periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] gi|330939546|gb|EGH42869.1| arginine/ornithine ABC transporter periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 258 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 79/246 (32%), Gaps = 25/246 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L +L F+ LK GI FA +G GFD Sbjct: 1 MKKLMLIGAMALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + K ++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M I S+++L G I VQ G+ E + + Sbjct: 106 KYYNSPARLVMKDGTTISDSLAELKGKKIGVQRGSIHERFAREVLAPKG--VEVTPYGSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233 EI A R D D + L L D + + P + A+ +G Sbjct: 164 NEIYLDIGAGRLDGTVADATLLQDGFLKTDAGKGYAFVG-PSFVDPKYFGDGIGIAVRKG 222 Query: 234 DTEWYN 239 D + Sbjct: 223 DKANLD 228 >gi|325663782|ref|ZP_08152183.1| hypothetical protein HMPREF0490_02924 [Lachnospiraceae bacterium 4_1_37FAA] gi|331087299|ref|ZP_08336368.1| hypothetical protein HMPREF0987_02671 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325470115|gb|EGC73349.1| hypothetical protein HMPREF0490_02924 [Lachnospiraceae bacterium 4_1_37FAA] gi|330408390|gb|EGG87861.1| hypothetical protein HMPREF0987_02671 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 259 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 92/267 (34%), Gaps = 20/267 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M IL + + + + K L G G + +K N + G D Sbjct: 1 MKIKKVAGILLAGTMMISMAACGGK--EEGAKSEKLIVGTEAGFAPYEYMKGN-EVVGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + + ++ ++ A+QS ++D ++ + RE + F Sbjct: 58 MDIAKAIADEMGKE---LEIKNMDFDGALAAVQSGKVDFVAAGVSISPEREE--AMDFSN 112 Query: 121 ITYFDGQGFIMHKKKGISSV-------SQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + +++K+ + S L G + VQ G ++ ++ K + Sbjct: 113 EYVNSTEVIVVNKENPAVTPAGEELAGSDLDGKVVAVQQGNIADIWVS--NKDNCNPKEV 170 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + + + + D D L ND L + + A A+ +G Sbjct: 171 KRYTKFAQAAEDLKNGKIDCIVMDQYPAEELVAAND---TLTTLDGTLFEDKYAIAVKKG 227 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKN 260 + E + ++ +V ++ N Sbjct: 228 NKELLDEINKVIDKLVEEGKIEEFTAN 254 >gi|238753377|ref|ZP_04614740.1| Glutamine-binding periplasmic protein [Yersinia ruckeri ATCC 29473] gi|238708330|gb|EEQ00685.1| Glutamine-binding periplasmic protein [Yersinia ruckeri ATCC 29473] Length = 238 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 81/242 (33%), Gaps = 22/242 (9%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + I L F S A L +T V F + + + GFDVD A++ Sbjct: 1 MAAITLAFAVSSHAAD---------KLIVATDTAFVPFEFKQGD-KYVGFDVDLWAAIAK 50 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + D P++ ALQ+K +D+ T R+ + F Y G Sbjct: 51 ELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AVDFSDGYYNSGLLV 105 Query: 130 IMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ I + L G + V++GT + DY KA+ F ++ Sbjct: 106 MVKTTNNDIKGEADLKGKVLAVKSGTGSV----DYAKANIKTKDLRQFPNIDNAYLELGT 161 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R DA D + T + + D I A QG +E V+ + Sbjct: 162 GRADAVLHDTPNILYFIKTAGNG-QFKAVGDSIKAQQYGIAFPQG-SELRVKVNAALKTL 219 Query: 249 VT 250 Sbjct: 220 KE 221 >gi|46579089|ref|YP_009897.1| amino acid ABC transporter periplasmic amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|46448502|gb|AAS95156.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|311232934|gb|ADP85788.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris RCH1] Length = 273 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 85/253 (33%), Gaps = 19/253 (7%) Query: 1 MYKDFFVSILCLIILFFTSFS--------TNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 M + L+ + S + S++ KRG L+ G +T V +A Sbjct: 1 MRSIIMTLLGVLMAISVASAADRPLRDQLAEDSVIEQALKRGTLRVGFST-FVPWAMQDK 59 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 +G + GF+VD L+ + ++ +P AL + + D++ +R Sbjct: 60 SGAFVGFEVDVATRLAQDLG---LNLELVPTKWSGIIPALLTGKFDVIIGGMSVKPVR-- 114 Query: 113 SLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 SL + F + + K + S+ + V A T + LA K K Sbjct: 115 SLKVNFTIPYDYASISVMASKSAAAGLKSLDDFDNPEVVVVARTGSTAALA--AKKRFPK 172 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 F+ + R A L N + ++ P+A A+ Sbjct: 173 ARLRYFDDEGPAIQEVLSGRAHALVSSDPLPRFEVLANPD-RLFMPEGKPLALEPVAFAV 231 Query: 231 IQGDTEWYNIVSW 243 + D + N++ Sbjct: 232 RKSDPDTLNVLDN 244 >gi|317130816|ref|YP_004097098.1| extracellular solute-binding protein family 3 [Bacillus cellulosilyticus DSM 2522] gi|315475764|gb|ADU32367.1| extracellular solute-binding protein family 3 [Bacillus cellulosilyticus DSM 2522] Length = 246 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 83/249 (33%), Gaps = 28/249 (11%) Query: 1 MYKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 M K F+ ++ I+L S N +T V F + G+ Sbjct: 1 MKKMSGLFLGLIVAIVLLSACGSEN------------YTVATDTNYVPFEFLDTETGEMV 48 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D ++ + + I + +++ + DI T + + Sbjct: 49 GFDIDLINEVADRVGFE---IDLEVVEFDGILTGMETGRYDIGIAGATITE--DRAELFD 103 Query: 118 FRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y G + + I S+ + G ++ +A TT+E L + N +F Sbjct: 104 FSDPYYDAGLILAVRADEEEIQSIDDVDGKTVATRAATTSETYLME-----NTDADISLF 158 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + A R DA D+ + ++ E + D+++ + D+E Sbjct: 159 PDIVNAYQDLVAGRVDAVIYDLP-NVVYYIESEALGEMKTVGDVLTGEQYGIMFPK-DSE 216 Query: 237 WYNIVSWTH 245 V+ Sbjct: 217 LREEVNEAL 225 >gi|221201411|ref|ZP_03574450.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia multivorans CGD2M] gi|221208033|ref|ZP_03581039.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia multivorans CGD2] gi|221214030|ref|ZP_03587003.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia multivorans CGD1] gi|221166207|gb|EED98680.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia multivorans CGD1] gi|221172218|gb|EEE04659.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia multivorans CGD2] gi|221178679|gb|EEE11087.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia multivorans CGD2M] Length = 257 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 74/219 (33%), Gaps = 13/219 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F +G GFD+D A+ + + +K ++ + ALQ Sbjct: 23 KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KAKCVWVENDFDGLIPALQ 79 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152 +++ D ++ + T R+ +AF Y I + G+ + L G + V Sbjct: 80 ARKFDAINSDMTITDQRK--HAIAFTDPIYTIPNQLIAKQGSGLQPTPQSLKGKRVGVLQ 137 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT E + + ++ + A ++ R DA D A L+ + Sbjct: 138 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGAKGFLSKPQGQ 195 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246 +S + + + + D + Sbjct: 196 GFAFAGGTVSDAEILGSGVGFGLRKNDAALKTALDQALK 234 >gi|296110461|ref|YP_003620842.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opinefamily [Leuconostoc kimchii IMSNU 11154] gi|295831992|gb|ADG39873.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opinefamily [Leuconostoc kimchii IMSNU 11154] Length = 491 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 113/353 (32%), Gaps = 51/353 (14%) Query: 1 MYKDFFVSILCLIILFF--------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE--- 49 M K+ ++ +I+L S + + IK+RG L G++ F Sbjct: 5 MMKNIATLVMSIILLVPLLVSLAPQVSAAESDPAYTKIKERGVLVVGLSADYAPFEFHAT 64 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 V GF+V + ++ + +Q + A+Q+ +ID++ + T Sbjct: 65 VNGRDQIVGFEVSMAKQIAKDLGVK---LQIKEMGFDGLVGAVQTGKIDVIISGINATPE 121 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQ---LSGASICVQAGTTTELTLADYFKA 166 RE + F Q ++ KK S S + Q TT E + + Sbjct: 122 REKV--VDFSKSYLSPKQTVLILKKNATSFTQDVKSFSNKKVGAQRQTTQETFVQNNMP- 178 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-P 225 + ++V ++ + A + + A + VI P Sbjct: 179 ---DSKLVSLQKVPDLVSQLSAGKISGVVLNDPISKAYAQQ--NKALQVIYPKPNEGEGA 233 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGI--TQKNINQVSKDTTNPDVQRFL------ 277 ++ A+ + + ++ +V++ +L + N +K + Sbjct: 234 VSVAMPKNSPVLKSKINHAIDDIVSSGKLKAYQKEANTLMFAKQSFWAKYGNLFIKGTLI 293 Query: 278 ----------GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 + L+ ++ I++ +GN ++ + + L Sbjct: 294 TLALAAIAVVVGVVLGTLLALFKLSPNF---ILKAVGN---IYVEYI-RGTPL 339 >gi|294636991|ref|ZP_06715313.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Edwardsiella tarda ATCC 23685] gi|291089819|gb|EFE22380.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Edwardsiella tarda ATCC 23685] Length = 244 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 84/250 (33%), Gaps = 25/250 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +I+ + F++ + ++ + F + AN + GFD Sbjct: 1 MKKLLVCAIVAA--MSFSAQAAEN-----------IRFASSATYPPFESLDANNNIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + + AL+ K+ D + D T R+ + F Sbjct: 48 IDLAKALCQEM---KANCTFSNQAFDSLITALKFKRYDAVISGMDITPERQKQVA--FTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K S++ + G + ++ GTT + L + + ++ + Sbjct: 103 PYYANSAIIIAQKG-KYHSMADMKGLRVGMENGTTHQKYLQEKHPE----IKTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++ R D GD + + N + + L A+ GD Sbjct: 158 NAILDLKSGRIDGVFGDTAVVNEWLKNNPQLASVGEHVTDPHYFGIGLGIAVRPGDKALL 217 Query: 239 NIVSWTHYAM 248 ++ A+ Sbjct: 218 AQLNQALAAI 227 >gi|167569242|ref|ZP_02362116.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia oklahomensis C6786] Length = 258 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 77/222 (34%), Gaps = 15/222 (6%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G++ F +G+ GFDVD + + I K + P + AL+ Sbjct: 23 KTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NVKCVWTPQDLDGIIPALK 79 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQA 152 +K+ D++ + T R + F Y I + SV L G + V+ Sbjct: 80 AKKFDVIVSSLTVTAKR--REQIDFSDKLYDAPARMIAKAGSPLAPSVESLKGKHVGVEQ 137 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T E +++ + ++ +++ A + R DA D L R Sbjct: 138 GSTQETFAKAHWEPKG--VTVVSYQNQDQVYADLGSGRLDATLQDELQADYGFLRTPRGK 195 Query: 213 EHVILPDIISKSPL------APAIIQGDTEWYNIVSWTHYAM 248 K P A + + D + + + AM Sbjct: 196 GFAWAG-PAVKDPKTLGDGTAMGLRKEDADLKDAIDRALAAM 236 >gi|241204562|ref|YP_002975658.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858452|gb|ACS56119.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 262 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 48/223 (21%), Positives = 80/223 (35%), Gaps = 11/223 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L DI KRG L+ + T F+ V A G+ G V+ ++ + + + + + Sbjct: 23 GTLDDIAKRGELRVAVQTQGPPFSLVDAAGERTGSSVELAELMAKEMGVKITFLDF---D 79 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL- 143 AL S + D+L + TL R + +AF + G ++ Sbjct: 80 WDGLIPALLSGKADLLVADMTPTLAR--GMKVAFTKPYMYTGSTVFTKAGGKFNTTGDCK 137 Query: 144 -SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 G I V G T E F +K + A + D D+SA+ Sbjct: 138 AKGTKIAVLLGATGEKEAKAAFPDAEIKS---YKGGGPLLLDAVNNGQADCGVNDVSAVK 194 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 S I+PD++SK PLA A + + ++ Sbjct: 195 GQSTAYPAGS-FTIMPDMLSKEPLAFATRYDEPDLLIWMNQFL 236 >gi|21284065|ref|NP_647153.1| hypothetical protein MW2336 [Staphylococcus aureus subsp. aureus MW2] gi|49487196|ref|YP_044417.1| extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus MSSA476] gi|57650957|ref|YP_187215.1| amino acid ABC transporter, amino acid-binding protein [Staphylococcus aureus subsp. aureus COL] gi|87162197|ref|YP_494994.1| amino acid ABC transporter, amino acid-binding protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88196339|ref|YP_501161.1| hypothetical protein SAOUHSC_02699 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151222525|ref|YP_001333347.1| amino acid ABC transporter, amino acid-binding protein [Staphylococcus aureus subsp. aureus str. Newman] gi|161510605|ref|YP_001576264.1| amino acid ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221141308|ref|ZP_03565801.1| amino acid ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253730087|ref|ZP_04864252.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|258451281|ref|ZP_05699314.1| extracellular solute-binding protein family 3 [Staphylococcus aureus A5948] gi|262048822|ref|ZP_06021703.1| hypothetical protein SAD30_0669 [Staphylococcus aureus D30] gi|262051566|ref|ZP_06023787.1| hypothetical protein SA930_1334 [Staphylococcus aureus 930918-3] gi|282920399|ref|ZP_06328122.1| polar amino acid transport system substrate-binding protein [Staphylococcus aureus A9765] gi|284025434|ref|ZP_06379832.1| amino acid ABC transporter, amino acid-binding protein [Staphylococcus aureus subsp. aureus 132] gi|294848956|ref|ZP_06789701.1| polar amino acid transport system substrate-binding protein [Staphylococcus aureus A9754] gi|297209766|ref|ZP_06926162.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300910778|ref|ZP_07128228.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus TCH70] gi|304379612|ref|ZP_07362345.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|21205508|dbj|BAB96201.1| MW2336 [Staphylococcus aureus subsp. aureus MW2] gi|49245639|emb|CAG44118.1| extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus MSSA476] gi|57285143|gb|AAW37237.1| amino acid ABC transporter, amino acid-binding protein [Staphylococcus aureus subsp. aureus COL] gi|87128171|gb|ABD22685.1| amino acid ABC transporter, amino acid-binding protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203897|gb|ABD31707.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150375325|dbj|BAF68585.1| amino acid ABC transporter, amino acid-binding protein [Staphylococcus aureus subsp. aureus str. Newman] gi|160369414|gb|ABX30385.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253726174|gb|EES94903.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|257861073|gb|EEV83888.1| extracellular solute-binding protein family 3 [Staphylococcus aureus A5948] gi|259160550|gb|EEW45573.1| hypothetical protein SA930_1334 [Staphylococcus aureus 930918-3] gi|259163080|gb|EEW47641.1| hypothetical protein SAD30_0669 [Staphylococcus aureus D30] gi|269941997|emb|CBI50409.1| extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus TW20] gi|282594345|gb|EFB99331.1| polar amino acid transport system substrate-binding protein [Staphylococcus aureus A9765] gi|294824335|gb|EFG40759.1| polar amino acid transport system substrate-binding protein [Staphylococcus aureus A9754] gi|296885439|gb|EFH24376.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300887758|gb|EFK82953.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus TCH70] gi|302334043|gb|ADL24236.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus JKD6159] gi|302752285|gb|ADL66462.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304341788|gb|EFM07694.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315197388|gb|EFU27725.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus CGS01] gi|320139120|gb|EFW31002.1| bacterial extracellular solute-binding protein, family 3 [Staphylococcus aureus subsp. aureus MRSA131] gi|320142503|gb|EFW34312.1| bacterial extracellular solute-binding protein, family 3 [Staphylococcus aureus subsp. aureus MRSA177] gi|329315100|gb|AEB89513.1| Amino acid ABC transporter, amino acid-binding protein [Staphylococcus aureus subsp. aureus T0131] gi|329726709|gb|EGG63170.1| ABC transporter, substrate-binding protein, family 3 [Staphylococcus aureus subsp. aureus 21189] gi|329730189|gb|EGG66579.1| ABC transporter, substrate-binding protein, family 3 [Staphylococcus aureus subsp. aureus 21193] Length = 259 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 76/256 (29%), Gaps = 13/256 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + FV I + IL +++ K + G F+ +G G+D Sbjct: 1 MKRLLFVMIAFVFILAACGNNSSKDK-EASKDSKTINVGTEGTYAPFSFHDKDGKLTGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + K+++ + F L + + D+++ RE F Sbjct: 60 IDVIKAVAKE---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYK--FSK 114 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F ++ +K I + G + Q T+ LA A + Sbjct: 115 PYTFSSAVLVIRENEKDIKDFDDVKGKKLA-QTFTSNYGKLAKDKGA-----DITKVDGF 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R D D + K I + + D E Sbjct: 169 NQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAKIKAIKGNAEQSRSAFAFSKKADDETVQ 228 Query: 240 IVSWTHYAMVTAEELG 255 + + EL Sbjct: 229 KFNDGLKKIEENGELA 244 >gi|328477583|gb|EGF47645.1| ABC transporter glutamine-binding periplasmic protein [Lactobacillus rhamnosus MTCC 5462] Length = 486 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 50/319 (15%), Positives = 101/319 (31%), Gaps = 28/319 (8%) Query: 1 MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + + + + L T S + S L + G + F + + G Sbjct: 1 MKRVWKWCVAGVAALILTLSLAMPVSTLA---AKKTYVIGTDVTYAPFEFADKHNQYVGI 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D +A++ A + ++ PL AL++ QID + T R+ + Sbjct: 58 DIDLMQAIAKA---EGFRVDIKPLGFNAAVQALEAHQIDGVIAGMQITPERKQKFAM--S 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K G++ + L G + ++ GT + + F+ Sbjct: 113 DPYYKTAVAMAVAKNSGVNQLKDLRGKRVALKTGTAAADF--AMSLKSKYGFSTVTFDDS 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE--- 236 + A D L T + + S A +G ++ Sbjct: 171 NNMYQDVITGNSVACFDDKPVLQYAIAT---GLKLKLAGPESKASYYGFATQKGRSDELD 227 Query: 237 ------WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALG 290 + + YA + A+ LG + + + T + FLG+ + + G Sbjct: 228 QKFNAGLKKVKADGTYAKIVAKYLGNGTQAAQKQTSAKTQDTDRSFLGLLRENWGTLMNG 287 Query: 291 LTKDWTYRIIR-----HMG 304 L + I+ +G Sbjct: 288 LRETMVVTIVAIFFATAVG 306 >gi|126665672|ref|ZP_01736653.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Marinobacter sp. ELB17] gi|126629606|gb|EBA00223.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Marinobacter sp. ELB17] Length = 291 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 34/253 (13%), Positives = 80/253 (31%), Gaps = 25/253 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L +L + ++ ++ + F NG+ GF+ Sbjct: 43 MKKILIAASCALAMLTGS-----------VQAEDSIRIAFDVPYEPFEYKDENGELTGFE 91 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A+ + +K +++ L +++ D + + T R + F Sbjct: 92 VELAEAMCEEM---NAKCEFVIQAWDGMIPGLLARKFDAIMSSMSVTPERAE--RVLFSK 146 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G+ + I + + S+ VQ GTT + + + + + Sbjct: 147 PYYNTPGGWFAAEGFDIDVTDMDAMKDKSVGVQRGTTMDTFVTENMT---GVVNIKRYNT 203 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEW 237 +++ R D D T + + + + + A+ + DT+ Sbjct: 204 ADDMVLDLEGQRLDVVFVDYPVGE---QTIKNKDGFIEIGESVKLGEGVGVAMRKRDTDL 260 Query: 238 YNIVSWTHYAMVT 250 V+ + Sbjct: 261 AERVNKALDTLKE 273 >gi|260904004|ref|ZP_05912326.1| extracellular solute-binding protein [Brevibacterium linens BL2] Length = 271 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 92/253 (36%), Gaps = 20/253 (7%) Query: 1 MYKDFFVSILCL-IILFFTSFSTNASILGD------IKKRGFLKCGINTGLVGFAEVKAN 53 M + ++I+ +L ++ + + G L + F V Sbjct: 1 MKRRSSLAIVAAGAMLALSACGGGGDSEAKSDSGVPLVEDGKLTVCSDIPYEPFEFVDG- 59 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ GFD+D +A + + + + A + AL + Q DI T R+ Sbjct: 60 GENVGFDMDLAQATAEDLKVE-LNVITTAFEAIQSGSALDTAQCDIALSGMSITDDRKT- 117 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F D G ++ KK GI + + G + VQ TT E D P Sbjct: 118 -KMDFSEPYLKDNLGLMVTKKSGIKGIDDVKGQKVGVQQATTGETYAKD------HGATP 170 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + FE + A + + D+ G+IS + ++D+ + + + L + +G Sbjct: 171 VQFEDSGLMTQAIQTGQVDSVIGNISIISTAVESDDK---LEFVEEYDTGEVLGAGVKKG 227 Query: 234 DTEWYNIVSWTHY 246 + E + + T Sbjct: 228 NKELLDAFASTMK 240 >gi|223043619|ref|ZP_03613664.1| glutamine-binding periplasmic protein [Staphylococcus capitis SK14] gi|222443107|gb|EEE49207.1| glutamine-binding periplasmic protein [Staphylococcus capitis SK14] Length = 485 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 93/286 (32%), Gaps = 30/286 (10%) Query: 1 MYKDFFVSILCLIILFFT-------SFSTNASILGDIKKRGFLKCGINTGLVGFAE---V 50 MYK + I+ ++L + + S IK+RG L+ G++ Sbjct: 1 MYKIIKILIVITLLLGSAITYINPIASAEEDSNWNKIKQRGELRVGLSADYAPLEFEKIK 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 D+ G D++ + + + D+ K++ + + AL++ +ID++ T R Sbjct: 61 NGKTDYAGVDIELAKKI---VKDNHLKLKIINMQFDSLLGALKTGKIDVIISGMTTTPER 117 Query: 111 EISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 + + F ++ K + +G I Q GT E + K Sbjct: 118 KK--EVDFTEPYMMTNNVMLVKKSDKNKYKDLKDFTGKKIAAQKGTDQEKIAHNEIK--- 172 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 R+ E A ++ + + A N E + K P Sbjct: 173 -DSQVSSLNRLPESILALKSGKVVGTIVEKPVGEAYLKQNPE-LEFANVKFNEEKKPTCI 230 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 A+ + ++ T + KN+ + D+Q Sbjct: 231 AVPKNSPILLKHLNQTID--------EVNNKNLIDKYMNQAAQDMQ 268 >gi|149376080|ref|ZP_01893846.1| extracellular solute-binding protein, family 3 [Marinobacter algicola DG893] gi|149359717|gb|EDM48175.1| extracellular solute-binding protein, family 3 [Marinobacter algicola DG893] Length = 250 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 31/247 (12%), Positives = 80/247 (32%), Gaps = 22/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L ++ + + + L+ + F NG+ GF+ Sbjct: 1 MRKLIVAASVALTMMAGVAHAQERN----------LRIAFDVPYEPFEYKDENGELTGFE 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A+ + + +++ L +++ D++ + T R + F Sbjct: 51 VELAEAMCEEM---NANCEFVIQAWDGMIPGLLARKFDLIMSSMSITPERAE--RVLFSE 105 Query: 121 ITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G+ + ++ ++ + G ++ VQ GTT + + + + Sbjct: 106 PYYNTPGGWFGPESFNTDVTDMAAMEGMTVGVQRGTTMDTFVTEEM---GGVVTIKRYTT 162 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +++ R D D + + + + + A+ + D E Sbjct: 163 ADDMVLDLEGQRLDVVFVDYP--VGEQTVLSKDGFKEVGEPVKLGQGVGVAMRKRDEELA 220 Query: 239 NIVSWTH 245 V+ Sbjct: 221 QEVNEAL 227 >gi|313636727|gb|EFS02389.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria seeligeri FSL S4-171] Length = 192 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 71/200 (35%), Gaps = 23/200 (11%) Query: 1 MYKDFFVSILCLIILF---------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-- 49 M K+F + + ++F + L I+++G L G++ + Sbjct: 1 MQKNFLQKLAAIALIFIFVFSGFTTVFAADNQDETLKKIQEKGVLTVGLSADYPPYEFHQ 60 Query: 50 -VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + GFDV ++ + K+ +N +L++ +ID++ T Sbjct: 61 TIDGKDKIVGFDVSIAEKIAKDL---DVKLDIKEMNFDSLLGSLKTGKIDMIISGMSPTP 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKA 166 R+ + F F Q ++ K +SV+ +G + Q TT E + Sbjct: 118 ERQK--EVDFSDPYMFVQQRVVVRKADKEKFTSVNDFNGVKVGAQKQTTQEELAQNEL-- 173 Query: 167 HNMKYHPIVFERVEEIDAAY 186 + + ++V ++ Sbjct: 174 --VGSDVVSLQKVPDLLLNL 191 >gi|312959434|ref|ZP_07773951.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] gi|311286151|gb|EFQ64715.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas fluorescens WH6] Length = 259 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 88/251 (35%), Gaps = 18/251 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + K+ L+ G++ F A+G GFD Sbjct: 1 MKKALLTLSALALCMAAGVATA--------KEYKELRFGVDPSYAPFESKAADGSLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + + K +++ + L++ + D + + T +RE + F Sbjct: 53 IDLGNAICAEL---KVKCKWVESDFDGMIPGLKANKFDGVISSMTVTPVREK--AIDFSS 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + K G S+ L G S+ + GT E + + + Sbjct: 108 ELFSGPTSLVFKKGAGYSTPESLKGKSVGYEQGTIQEAYAKAVLDKAGVTTK--AYANQD 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV---ILPDIISKSPLAPAIIQGDTEW 237 ++ A + R DA D+ L + + + + D + S A I +G+TE Sbjct: 166 QVYADLTSGRLDASVQDMLQAELGFLKSPAGAGYEVSAPIDDPLLPSKTAIGIKKGNTEL 225 Query: 238 YNIVSWTHYAM 248 ++ A+ Sbjct: 226 KALLDKGIKAL 236 >gi|331647964|ref|ZP_08349056.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli M605] gi|330912132|gb|EGH40642.1| histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ [Escherichia coli AA86] gi|331043688|gb|EGI15826.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Escherichia coli M605] Length = 260 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 89/244 (36%), Gaps = 20/244 (8%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ G + F + G+ GFD+D + L I ++ ++ +L++K Sbjct: 28 IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKAK 84 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154 +ID + + T R +AF Y ++ K I +V L G + V GT Sbjct: 85 KIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGT 142 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T E +++ + + ++ + I + A R DA D A L ++ Sbjct: 143 TQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDY 200 Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + L + + D E ++ +A + A+ +++K Sbjct: 201 KFGGPSVKNEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKYF 253 Query: 270 NPDV 273 + DV Sbjct: 254 DFDV 257 >gi|312139386|ref|YP_004006722.1| glutamate abc transporter substrate binding lipoprotein glub [Rhodococcus equi 103S] gi|325672733|ref|ZP_08152429.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Rhodococcus equi ATCC 33707] gi|311888725|emb|CBH48037.1| putative glutamate ABC transporter substrate binding lipoprotein GluB [Rhodococcus equi 103S] gi|325556610|gb|EGD26276.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Rhodococcus equi ATCC 33707] Length = 281 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 40/242 (16%), Positives = 81/242 (33%), Gaps = 11/242 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 S +L D + G L G G A + + GFDV+ + +++ + Sbjct: 26 SACGSSEPRDVLADAAE-GQLTIGTKYDQPGLALREPDKTMTGFDVEVAKYIANYLGVPE 84 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 S I + + +R +++ ++D + T R+ + F Y GQ ++ Sbjct: 85 SGITWREAPSAQRENLIKNGEVDFVVGTYSITDNRKKV--IDFAGPYYVAGQSLLVRADD 142 Query: 136 GISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + ++ G +C +G+T +A + F+ A + DA Sbjct: 143 DSITGAESLQGGKKLCSVSGSTPAQKIAKSYP----GVQLQQFDSYSSCVEALHRGKVDA 198 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 T D L P E + + + +G+TE ++ M+ Sbjct: 199 LTTDDIILAGYAAQY--PGEFKLAGQPFTTELYGVGLPKGETEARMKINDAIEDMIATGA 256 Query: 254 LG 255 Sbjct: 257 WQ 258 >gi|295102634|emb|CBL00179.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Faecalibacterium prausnitzii L2-6] Length = 281 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 86/260 (33%), Gaps = 34/260 (13%) Query: 1 MYKDFFVSI----LCLIILFFTSFSTNA-----------------SILGDIKKRGFLKCG 39 M + F+S+ +L S+N + L I+ G L Sbjct: 1 MKRRTFISLMSVMAAAGVLSLAGCSSNTSVSTASSIAASASAAAANKLETIQSNGKLVIA 60 Query: 40 INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 + ++ + G+DV+ RA++ + +P Y+ + F L + + D+ Sbjct: 61 LEGAWQPWSFHDESDTLVGYDVEVSRAIAEKLGVEPE---YVESDWDSLFAGLDAGRYDL 117 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTEL 158 + + T R + F + + K I S L+G + +T Sbjct: 118 VCNGVEVTEERAKT--YDFTTPYGYIHTALAVRKDNEDIKSFEDLAGKTTANSLASTYME 175 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 LA+ + A + +EE A R DA + Y + + ++ Sbjct: 176 -LAESYGA-----TVQGIDTLEETIQLLTAGRIDATLNANVSFYDYLNVHPDA-DFKLVA 228 Query: 219 DIISKSPLAPAIIQGDTEWY 238 S +A I++ + + Sbjct: 229 QTEDASHVAIPIVKSEDSSF 248 >gi|257126582|ref|YP_003164696.1| extracellular solute-binding protein family 3 [Leptotrichia buccalis C-1013-b] gi|257050521|gb|ACV39705.1| extracellular solute-binding protein family 3 [Leptotrichia buccalis C-1013-b] Length = 251 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 83/237 (35%), Gaps = 19/237 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + ++ + S S + + GI+T F K + + G D Sbjct: 5 MLKMIMLVTVFMLTMACGSKSADG--------KKKYTIGIDTSFPPFEYKKDS-KYTGID 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ +A+ + ++++ P++ ALQS Q+D + T R+ + F Sbjct: 56 IELLQAIGK---LEGFEVEFKPMDFGGLIPALQSGQLDGVIAGASITEERKK--SVDFSD 110 Query: 121 ITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G + I +V L G + V+ GT D K K VFE Sbjct: 111 PYYESGLVALVNKGNSTIKTVKDLEGKRLVVKNGTAGAKFAEDNLK---GKATIRVFEDS 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 A ++ DA D + N + + + + + +G+ + Sbjct: 168 ASTLKAVENNQADAAFEDYPVIAYTIKVNPNLNVKIGTEKLTNNE-YGFMVKKGENK 223 >gi|156933097|ref|YP_001437013.1| hypothetical protein ESA_00907 [Cronobacter sakazakii ATCC BAA-894] gi|156531351|gb|ABU76177.1| hypothetical protein ESA_00907 [Cronobacter sakazakii ATCC BAA-894] Length = 264 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 44/223 (19%), Positives = 79/223 (35%), Gaps = 14/223 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L+ G + F A G+ GFD+D + L I ++ + +L++K Sbjct: 32 LRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---QTQCSFTEQPLDALIPSLKAK 88 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154 +ID + + T R +AF Y ++ K I ++ L G + V GT Sbjct: 89 KIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKGSPIQPTLESLKGKRVGVLQGT 146 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T E +++ + ++ + I + A R DA D A L + Sbjct: 147 TQETYGNEHWAPKG--VEIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKGY 204 Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAE 252 I L I + D E ++ +A + A+ Sbjct: 205 QFGGPSIKDEKLFGVGTGMGIRKEDNELREALNKA-FADMRAD 246 >gi|237794467|ref|YP_002862019.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum Ba4 str. 657] gi|229260832|gb|ACQ51865.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum Ba4 str. 657] Length = 274 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 77/250 (30%), Gaps = 10/250 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVK-ANGDWKGFD 60 K F+S+ ++ L T + A +IK+ +K G + F + + +GF+ Sbjct: 7 KKIFLSMSLVVALGVT-LTACAQKNKEIKENKNTIKIGTSGQYYPFTFIDKDSNKVQGFE 65 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + P + + L + +ID ++ T + F Sbjct: 66 IDIWEEIGKRTGYKPE---FKVADWTGIMGMLDTGKIDTVANEITVTD--KKKEKYYFSK 120 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFER 178 + G K I S+ L G ++ Q GT ++ DY + + Sbjct: 121 PYVYSGVQLATKKGNNNIKSLKDLEGKTVATQVGTNYSKSIEDYNNKNTGEDIKTKQYNS 180 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA D A + + P ++ + E Sbjct: 181 FSGMFQDVDLGRVDALIEDKLACLVNIKKSGLNLQLAGEPIEEMENAYPFVKKDENKEKI 240 Query: 239 NIVSWTHYAM 248 ++ M Sbjct: 241 EKINKALDDM 250 >gi|284048018|ref|YP_003398357.1| extracellular solute-binding protein family 3 [Acidaminococcus fermentans DSM 20731] gi|283952239|gb|ADB47042.1| extracellular solute-binding protein family 3 [Acidaminococcus fermentans DSM 20731] Length = 261 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 76/261 (29%), Gaps = 16/261 (6%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M K F IL +++ + + ++ L G N F +G Sbjct: 1 MKKMKMFAGILAGLMMCVAAAGCGGGSGTSEKKPAEKKELVVGTNPSFAPFEFTDKKDGK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D AL+ + + + +L+S ID+ T R+ Sbjct: 61 VMGFDIDLINALARKAGYEK--VTIKSIAFDGLIPSLESGNIDVSITGMSITDARK--QK 116 Query: 116 LAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F Y G + + I + L G +I VQ GTT A Sbjct: 117 VNFTDPYYESGLMAVVKKDNEAIKGLDDLKGKTIAVQLGTTGAKYAETIEGAK-----VK 171 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F+ + + DA D+ L L + A + + Sbjct: 172 TFDSSDLACLELKNGGADAVISDLPVLQ-YFLKQGGSQYAKSVGTPKKGDFYGIATAKKN 230 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + ++ M E Sbjct: 231 KNLCDKLNKALAEMKKDGEYQ 251 >gi|307155069|ref|YP_003890453.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece sp. PCC 7822] gi|306985297|gb|ADN17178.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7822] Length = 511 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 63/217 (29%), Gaps = 14/217 (6%) Query: 31 KKRGF-LKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 + G F G+ GFD++ +A+ KI + L Sbjct: 36 QDTGKAFTVATEPAFPPFEMTDQKTGELTGFDLELMKAIGQEAG---LKITFESLPFDGI 92 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGAS 147 ALQ+ + T R + L+F + G + K I S L G Sbjct: 93 IPALQAGTVKAAISGMTITPER--AQTLSFSRPYFKAGLAIAVRKDNNSIKSFDDLKGKK 150 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 I VQ GTT A A +F+ + DA D Sbjct: 151 IAVQIGTTGAKQAAQIEGA-----EISIFDSAVLALQELVNGKVDAVVNDAPVTLYAIKK 205 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 P ++ +++++ A+ + I Sbjct: 206 AGLPGV-KVVGELLTEEYYGIALPKNSPYLKQINDGI 241 >gi|194015852|ref|ZP_03054467.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Bacillus pumilus ATCC 7061] gi|194012207|gb|EDW21774.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Bacillus pumilus ATCC 7061] Length = 264 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 73/236 (30%), Gaps = 14/236 (5%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + V + ++ + + K LK G FA NG GF Sbjct: 1 MKNKKWLVVLFAAMLAVLAACGGGNQG--EGKDEKVLKVGATGQSYPFAYKD-NGKLVGF 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ A++ + + + L S ++D +S T R+ F Sbjct: 58 DVEVTEAIAKKLGYK---LDWQLSEFSGLMGQLTSGKLDTVSNQVAVTDERK--QTFNFT 112 Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G I+ K I + L G ++ G+ L + + +E Sbjct: 113 DTYAYAGTQIIVKKDNNDIKGLDDLKGKTVAAVLGSNHAKNLESKDPDKKI--NIKTYET 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + R DAY S L A P I+ + I + + Sbjct: 171 QDGVLNEVANGRVDAYVNGRSVLLAQIEKTGLP--LKIVGNPIVYEEVGYPFAKDK 224 >gi|59800816|ref|YP_207528.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae FA 1090] gi|293399480|ref|ZP_06643633.1| polar amino acid transport system substrate-binding protein [Neisseria gonorrhoeae F62] gi|59717711|gb|AAW89116.1| putative ABC transporter, periplasmic binding protein, amino acid [Neisseria gonorrhoeae FA 1090] gi|291610049|gb|EFF39171.1| polar amino acid transport system substrate-binding protein [Neisseria gonorrhoeae F62] Length = 275 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 68/224 (30%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L + + S++ I +G + G Sbjct: 2 MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAISGSLIERINNKGTVTVGTEGTYAP 61 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 62 FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 118 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + H I S++ + G + KA Sbjct: 119 T-SPERQATFDKSEPYSWSGAVLVAHNDSNIKSIADIKGVKTAQSLTSNYGE------KA 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 172 KAAGAQLVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215 >gi|157165684|ref|YP_001467256.1| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Campylobacter concisus 13826] gi|112801956|gb|EAT99300.1| putative lysine-arginine-ornithine-binding periplasmic protein [Campylobacter concisus 13826] Length = 238 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 75/250 (30%), Gaps = 30/250 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + + + L LK G F + N GFD Sbjct: 1 MKKIFALLLTAFVALCA----------------NELKFGTAANYPPFEYIDENNKITGFD 44 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +S + + ++ AL++ +I+ + T + + F Sbjct: 45 IDLIDEISKRAG---FSYKIINMSFDGLIPALKAGKINGIISAMSATP--DRLKSIDFTK 99 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y ++ K + + +L+G + VQ GT EL A + E Sbjct: 100 PYYLTENIYLKKKGNDALKAKEELAGKKVGVQQGTIQELAANAINGAK-----VVPSEDT 154 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTEWY 238 + + + DA D S Y P ++ + A + +E Sbjct: 155 VPLIMGLKVGKFDAVILDSSIGYGFI--KKNPEVEAFFKEVDGSEGFSIAFDKNKQSELI 212 Query: 239 NIVSWTHYAM 248 ++ M Sbjct: 213 AKINQILDEM 222 >gi|296103155|ref|YP_003613301.1| arginine-binding periplasmic protein 2 precursor [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057614|gb|ADF62352.1| arginine-binding periplasmic protein 2 precursor [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 243 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 69/218 (31%), Gaps = 16/218 (7%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G++ F + A+ GFD+D +AL + D + +L+ Sbjct: 22 KINFGVSATYPPFESLDASNQIVGFDIDLAKALCKQMQAD---CTFTNHAFDSLIPSLKF 78 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K+ D + D T R + F Y + I K S +L G I ++ GT Sbjct: 79 KKYDAVISGMDITPERSKQVA--FTDPYYANSAVVIAKKG-AYKSFDELKGKRIGMENGT 135 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T + L D + ++ + + R D GD + + P Sbjct: 136 THQKYLQDKHPE----VKTVAYDSYQNAIIDLKNGRIDGVFGDTAVVNEWL--KTNPQLG 189 Query: 215 VILPDIISKSP----LAPAIIQGDTEWYNIVSWTHYAM 248 + L A+ + ++ A+ Sbjct: 190 TATEKVTDPQYFGTGLGIAVRPDNKALLAKLNGALKAI 227 >gi|50122458|ref|YP_051625.1| amino acid-binding protein [Pectobacterium atrosepticum SCRI1043] gi|49612984|emb|CAG76435.1| amino acid-binding protein [Pectobacterium atrosepticum SCRI1043] Length = 261 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 81/246 (32%), Gaps = 11/246 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+K + L ++ + S G F A +GFD Sbjct: 1 MFKKLL-CVGALFATALSTTVLSTSTFA---AEPTYVVGSGGTYRPFEFENAQKQLEGFD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ A + I+ + + F L S DI+ T R+ + F Sbjct: 57 IDIIKAIAKA---ENFNIKLINTPWEGIFATLNSGDRDIIISGITITDKRKQM--VDFSA 111 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q ++ K I S++ L + V +T ++ ++D + F+ Sbjct: 112 PYFPAEQSIVIPKGSTIDSIAALKDHKVGVVNSSTADIVVSDVLGKN--STSIKRFDNTP 169 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A GD+ + T+ +++ + A+ +G+ + Sbjct: 170 LMLQELYEDGVGAAVGDVGVVKFYIKTHPEKQFNLVSDAKFERQYFGIAVAKGNDKLREK 229 Query: 241 VSWTHY 246 ++ Sbjct: 230 INAGLK 235 >gi|16763173|ref|NP_458790.1| arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144652|ref|NP_807994.1| arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213052287|ref|ZP_03345165.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213580415|ref|ZP_03362241.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213850086|ref|ZP_03380984.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|25296350|pir||AB1048 probable arginine-binding periplasmic protein [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16505481|emb|CAD06831.1| probable arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29140291|gb|AAO71854.1| probable arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 239 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 86/251 (34%), Gaps = 26/251 (10%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + L L + S +A L G + + V A+ GFD+D A+ Sbjct: 1 MLLASLSVHAASVSART---------LHFGTSATYAPYEFVDADNKIVGFDIDVANAVCK 51 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + ++ + + L+ K+ D + D T RE ++F Y Sbjct: 52 EM---QAECSFTNQSFDSLIPGLRFKKFDAVIAGMDMTPKRE--QQVSFSQPYYEGLSAV 106 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ +K + + L G + ++ GTT + L D P+ ++ + + Sbjct: 107 VVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYLNAFTDLKNN 162 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244 R + GD + A+ ++ I+ + S A+ +G+ ++ Sbjct: 163 RLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKGNDALLQEINAA 219 Query: 245 HYAMVTAEELG 255 + + E Sbjct: 220 LDKVKASPEYA 230 >gi|325277061|ref|ZP_08142719.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] gi|324097811|gb|EGB95999.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] Length = 273 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 81/260 (31%), Gaps = 23/260 (8%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V L++L S + + L ++ R + + F+ + GFDVD +A Sbjct: 6 VLGAGLVLLATASQALAGTTLERVESRKEMVNVLMESYPPFSFLNDQNQLDGFDVDVAKA 65 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + ++ + S + DI + + R F Y Sbjct: 66 VADKLGVK---LRLETPSWDVIAAGRWSGRYDICICSMTPSKARAEV--FDFPVEYYASP 120 Query: 127 QGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI----------V 175 + K + I L G + + + ++ E L + I Sbjct: 121 AVIVVNAKDERIHGAKDLDGRKVGLTSASSYESYLNKNLVIEGKEDQKIDYPFDFVQIAP 180 Query: 176 FERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++ R DA + L + + + + + P + AI + Sbjct: 181 YDTDNVAFQDLGLGAGVRLDAILTN---LVTAQPRLTQDKRFKLAGAPLYEEPNSVAIEK 237 Query: 233 GDTEWYNIVSWTHYAMVTAE 252 GD EW V +A + A+ Sbjct: 238 GDPEWDAKVRQV-FAELKAD 256 >gi|260661991|ref|ZP_05862887.1| glutamate ABC transporter substrate-binding component [Lactobacillus fermentum 28-3-CHN] gi|260553374|gb|EEX26266.1| glutamate ABC transporter substrate-binding component [Lactobacillus fermentum 28-3-CHN] Length = 276 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 94/270 (34%), Gaps = 29/270 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAE---VKAN 53 K + ++ + ++ + S S + DIKK+G L G + + Sbjct: 4 KKWLKMLMVVALVVMGAVSLAGCSSSSDSSVQDIKKKGELVVGTSADYPPYEFQIVKNGK 63 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+DV ++ I ++++ + LQ+K+ D++ WT R Sbjct: 64 QQIVGYDVKLAHLIAKNIGVKK--VRFVNIAFPSLISELQNKKFDMVMAGMVWTKERAK- 120 Query: 114 LGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 ++F + GQ ++ K + S +S L GA++ Q + E Sbjct: 121 -AVSFSSTYHHGGQVLLVSKANENKYSGISALKGATLGAQQSSEQET-----IGKSLSGV 174 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK------SP 225 + + + +A D ++ A + P+++ I +I K P Sbjct: 175 KLVTESSITTLSQEVKAGTLDGLILAQTS--ADAFVAEHPNDYAIAKNITFKISAKTSDP 232 Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + D +V+ T + EL Sbjct: 233 -RVVVRKSDKALLKVVNKTIKDAKKSGELD 261 >gi|50086540|ref|YP_048050.1| amino acid ABC transporter periplasmic substrate-binding protein [Acinetobacter sp. ADP1] gi|49532514|emb|CAG70228.1| putative amino acid-binding protein (ABC superfamily, peri_bind) [Acinetobacter sp. ADP1] Length = 305 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 70/187 (37%), Gaps = 8/187 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 NA L DIKK G +K I F V + +G+D+D + ++ + Sbjct: 59 SALMLPTFANADALADIKKAGVIKIAIPQDFPPFGTVGTDLKAQGYDIDVAKLIAQDLGV 118 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +Q +P+ + R L +K++D++ + RE + F G K Sbjct: 119 K---LQLVPVTSANRIPYLTTKKVDLVISSLGKNPEREKV--IDFVGPYAPFYNGVFGQK 173 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 + S + L+G +I V G+ +L L+ + FE +A+ + + + Sbjct: 174 NVSVKSAADLAGKTIAVTRGSIEDLELSKVAPS---STTIKRFEDNNSTVSAFYSGQVNL 230 Query: 194 YTGDISA 200 Sbjct: 231 IATGNVV 237 >gi|158314289|ref|YP_001506797.1| extracellular solute-binding protein [Frankia sp. EAN1pec] gi|158109694|gb|ABW11891.1| extracellular solute-binding protein family 3 [Frankia sp. EAN1pec] Length = 385 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 87/224 (38%), Gaps = 13/224 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 S + I++ G+L+ G+ T F + + +GFD ++ AI DP +Q Sbjct: 91 GARGSRIEAIRRYGYLRVGVTTVAPPFGSMNWRTMEVEGFDPAIAGEIAGAILGDPELVQ 150 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + ++ ++R + +DI++ T R+ + F + Y ++ G+ + Sbjct: 151 FRAVDTRDREALVADGTVDIVTGTMTMTCARKERVR--FSGVYYEAAMRILVPAGAGLRT 208 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 V L+G +C G+T+ +A+ + + + + AA + DA D + Sbjct: 209 VGDLAGRPVCSSQGSTSFEKVANLVRGPGRPVA-VNRVGIVDCLAALQRGEVDAVATDDT 267 Query: 200 ALYALKLTND-----RPSEHVILPDIISK----SPLAPAIIQGD 234 L ++ + P + + P AI + D Sbjct: 268 ILAGMRAEDATVTVLGPEAFDGVLGPAGRAGLDEPYGVAIGRTD 311 >gi|258623970|ref|ZP_05718923.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio mimicus VM603] gi|258583764|gb|EEW08560.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio mimicus VM603] Length = 243 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 84/260 (32%), Gaps = 31/260 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L+ + +K + F + N +GFD Sbjct: 1 MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + AL+ K+ D D T R ++F Sbjct: 48 VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVSFSN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ ++ + L G + VQ G+T + L + + + + Sbjct: 103 PYYDNSAAFVSLAG-KVADQAALKGKRVGVQNGSTHQSFLLEQLP----DVVAVPYSSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + + R D+ GD + + + + + ++ + A+ + + Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLTYVGERVTNAQYFGNGFGIAVNKDNQ 214 Query: 236 EWYNIVSWTHYAMVTAEELG 255 + ++ A+ E Sbjct: 215 ALVDQLNAALEAVKENGEYA 234 >gi|120556215|ref|YP_960566.1| extracellular solute-binding protein [Marinobacter aquaeolei VT8] gi|120326064|gb|ABM20379.1| amino acid ABC transporter substrate-binding protein, PAAT family [Marinobacter aquaeolei VT8] Length = 248 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 32/248 (12%), Positives = 80/248 (32%), Gaps = 24/248 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L ++ T+ + + L+ + F NG+ GF+ Sbjct: 1 MKKLIVAASCALAMMTGTAQAQD------------LRIAFDVPYEPFEYRDDNGELTGFE 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A+ + + +++ L +++ D++ + T R + F Sbjct: 49 VELATAMCEEL---QANCEFVIQAWDGMIPGLLARKFDLIMSSMSITPERAE--RVLFSE 103 Query: 121 ITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G+ + ++ + + ++ VQ GTT + + + + + Sbjct: 104 PYYITPGGWFGPESFNTDVTDMDAMKDKTVGVQRGTTMDTYVTENM---GGVVNIKRYTT 160 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E++ R D D + ++ + I + A+ + D + Sbjct: 161 AEDMVLDLEGQRLDVVFVDYP--VGEQTVLNKEGYKEVGEPIKLGEGVGVAMRKRDAKLA 218 Query: 239 NIVSWTHY 246 V+ Sbjct: 219 EDVNAALK 226 >gi|257455733|ref|ZP_05620961.1| arginine-binding periplasmic protein 2 [Enhydrobacter aerosaccus SK60] gi|257446861|gb|EEV21876.1| arginine-binding periplasmic protein 2 [Enhydrobacter aerosaccus SK60] Length = 268 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 38/261 (14%), Positives = 83/261 (31%), Gaps = 21/261 (8%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKR---------GFLKCGINTGLVGFAEVKANG 54 ++ +C + + T+ A ++ F A+G Sbjct: 11 KLALATVCAVSMGLTACQKPAEKTEGAAASQPAASASTGKKIRIATEGAYKPFNYTNADG 70 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G+DVD +A+ + D + + + L +++ D ++ T R Sbjct: 71 TLGGYDVDVAKAVCAQAKLD---CEIVAQDWDGILPGLMARKYDAVAAGMSITPERSA-- 125 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F + + ++ K + +SG I Q TT L D N Sbjct: 126 QVDFTTPYFKNTMVWVAAKGGK-FNPQAISGLKIGGQRSTTMAQYLQDKLSKTN---EIK 181 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 +++ + ++ R D+ + N ++ ++ + +A AI +GD Sbjct: 182 LYDNYDNAYIDLKSGRIDSVLSEKVTASEWLKQNSN--YQIVGSEMDNGDNIAMAIRKGD 239 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 A+ + EL Sbjct: 240 P-LKAEFDKALDALQSNGELA 259 >gi|94986574|ref|YP_594507.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Lawsonia intracellularis PHE/MN1-00] gi|94730823|emb|CAJ54185.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Lawsonia intracellularis PHE/MN1-00] Length = 249 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 82/252 (32%), Gaps = 19/252 (7%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + F F+SIL ++ +F ++ + + + + G+ Sbjct: 1 MLRTFGFLSILTILSIFSSTSIA----------KDIYIVASDATWPPMENLDEHKKVVGY 50 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+ A++ + I+ F AL + IDI++ + T R + F Sbjct: 51 SSDYITAVAKEAGIN---IEIRNTAWDGIFAALNADLIDIIASSVTITDKR-KQKVMDFS 106 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y Q ++ I S+ L+G + Q GT+ L + +K ++ + Sbjct: 107 KPYYNVHQAIVVPNGSPIKSIQDLNGKKVGGQIGTSG---LIETLPKAKVKAIVKTYDEI 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD-IISKSPLAPAIIQGDTEWY 238 DA D ++H+ + A+ +G+ E Sbjct: 164 GLALEDLSNGSLDAVICDEPVANYFIKQQPEYTDHITIAFITTEIEQYGFAVKKGNKELL 223 Query: 239 NIVSWTHYAMVT 250 ++ A+ Sbjct: 224 EKINAGVKAVKE 235 >gi|18309582|ref|NP_561516.1| amino acid ABC transporter [Clostridium perfringens str. 13] gi|18144259|dbj|BAB80306.1| probable amino acid ABC transporter [Clostridium perfringens str. 13] Length = 278 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 40/290 (13%), Positives = 95/290 (32%), Gaps = 30/290 (10%) Query: 1 MYKDFF-----VSILCLIILFFTSFST-------NASILGDIKKRGFLKCGINTGLVGFA 48 M K+ F V+++ + L ++ + IK+ G L G++ + Sbjct: 1 MKKNIFKKILSVAMIGGLTLSLAGCGAKTAKENGSSDKVAKIKESGKLVVGLSADYAPYE 60 Query: 49 E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 G D+D + ++ + D ++ + ++++ ID+ Sbjct: 61 FHIMKDGKDQIVGLDIDIAKEVAKNLGVD---LEIKEMEFGAIIQSVKNGMIDMGISG-- 115 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADY 163 T + + F I Y QG +++K I + L G + Q G+ + Sbjct: 116 ITPDEKRKEAVDFSDIYYEAEQGILINKDNKESIKGIGDLKGKKVGAQMGS-----IQAE 170 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + + V + + + DA ++ A + V I + Sbjct: 171 IAKGIEGADVKLLDNVNTLILELKTGKLDAVITELP--VAKIASEVNSELAVADEVIKNS 228 Query: 224 S-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 A AI +G+ + + V+ T + ++ + ++ + Sbjct: 229 EGGSAIAIQKGNKDLVDKVNSTIKELKENGKIDQFTNDAIELVPYQKKEE 278 >gi|113477911|ref|YP_723972.1| extracellular solute-binding protein [Trichodesmium erythraeum IMS101] gi|110168959|gb|ABG53499.1| extracellular solute-binding protein, family 3 [Trichodesmium erythraeum IMS101] Length = 286 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 84/266 (31%), Gaps = 20/266 (7%) Query: 1 MYKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + I + F +A I +R + G+ F +G W Sbjct: 1 MNKKLKIIIASSLAFLAAIFPQKISHAQTQETIIRRELIVVGVRGDSPWFGFRN-DGKWT 59 Query: 58 GFDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G+ +D AL+ + DP +++ + + R+ + S ++D+ + RE Sbjct: 60 GYCIDIAYALADRLSANQLDPIRVRLVTSTTQSRWDLVTSGRVDLECGPNSISAEREAKH 119 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 G+ F + + K + V + A++ V TT E L + + Sbjct: 120 GINFSSPFFITATQILAKKGRQEEDVK-VGNATVGVVRNTTNESDLKSAYPLEKIDNK-- 176 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-------LA 227 + EE A + D + L + E+ I++ Sbjct: 177 -YLSREEGVQAVMDGEVSGFASDGTLLLGSAEMMNLDIENDYTFITINQENGRPFCAGYG 235 Query: 228 PAIIQGDTE--WYNIVSWTHYAMVTA 251 + G+ W ++ A Sbjct: 236 FILPGGEDNSSWQRYINDFLAHNKKA 261 >gi|322653448|gb|EFY49778.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|323213182|gb|EFZ97984.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] Length = 239 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 84/248 (33%), Gaps = 20/248 (8%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + L L + S +A L G + + V A+ GFD+D A+ Sbjct: 1 MLLASLSVHAASVSART---------LHFGTSATYAPYEFVDADNKIVGFDIDVANAVCK 51 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + ++ + + L+ K+ D + D T RE ++F Y Sbjct: 52 EM---QAECSFTNQSFDSLIPGLRFKKFDAVIAGMDMTPKRE--QQVSFSQPYYEGLSAV 106 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ +K + + L G + ++ GTT + L D P+ ++ + + Sbjct: 107 VVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYLNAFTDLKNN 162 Query: 190 RCDAYTGDISALYALKLTNDRP--SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 R + GD++A+ N + L A+ +G+ ++ Sbjct: 163 RLEGVFGDVAAIGKWLKNNPNYAIMDERASDPDYYGKGLGIAVRKGNDALLQEINAALDK 222 Query: 248 MVTAEELG 255 + + E Sbjct: 223 VKASPEYA 230 >gi|322391787|ref|ZP_08065252.1| amino acid ABC superfamily ATP binding cassette transporter [Streptococcus peroris ATCC 700780] gi|321145267|gb|EFX40663.1| amino acid ABC superfamily ATP binding cassette transporter [Streptococcus peroris ATCC 700780] Length = 481 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 70/226 (30%), Gaps = 16/226 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L L + A ++ ++ F ++ + G D Sbjct: 1 MKKKILACLLILFPILSLGL-VKADT-----EKTKYVIASDSSFAPFVFQDSSNQYTGID 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + I+ A+QS Q D + T R+ + F Sbjct: 55 MDLIKAIAEDQGFE---IEITNPGFDAAINAVQSGQADGIIAGMSVTDARKET--FDFSD 109 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + + ISS L+G ++ V+ GT ++ L + + K F Sbjct: 110 SYYTANTILGVKESSTISSYEDLNGKTVGVKNGTASQTFLTENQSKYGYK--IKTFSDAA 167 Query: 181 EIDAAYRAHRCDAYTGDISAL---YALKLTNDRPSEHVILPDIISK 223 + + DA D + + P + + Sbjct: 168 SMYDSLNTGSIDAVMDDEPVIKYSISQGQKLKTPIAGTPIGETAFA 213 >gi|299783710|gb|ADJ41708.1| Amino acid ABC transporter substrate-binding component [Lactobacillus fermentum CECT 5716] Length = 266 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 37/255 (14%), Positives = 75/255 (29%), Gaps = 23/255 (9%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKK-----RGFLKCGINTGLVGFAEVKANG 54 M K +S++ ++ + + + +G L G+ ++ NG Sbjct: 1 MKKWMKRLSVVAASLVAMVALAACGKSSSSSSEPQLVTKGTLTVGLEGTYAPYSYR-ENG 59 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GF+VD R L+ + ++++P + SK+ D+ + T R+ Sbjct: 60 KLTGFEVDLARDLAKKMGYK---VKFVPTKWDSLIAGVGSKKFDVAINDIAMTPERQK-- 114 Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + IM I S+ + G I GT + Sbjct: 115 SYLFSTPYIYSKSALIMKSDNTTIKSIDDIKGKKIAAATGTANAQNV------KKFGGET 168 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP---LAPAI 230 + R R +A A + ++ SK P + + Sbjct: 169 VSSTDFSTAMELVRQGRAEAALNSKEAFL-YYQKSTGATDLKYQEVPSSKIPGQKIGVLM 227 Query: 231 IQGDTEWYNIVSWTH 245 + + V+ Sbjct: 228 AKNNKGLQTKVNKAL 242 >gi|312958494|ref|ZP_07773014.1| amino acid ABC transporter [Pseudomonas fluorescens WH6] gi|311287037|gb|EFQ65598.1| amino acid ABC transporter [Pseudomonas fluorescens WH6] Length = 265 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 91/250 (36%), Gaps = 15/250 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + + + A + D KRG LK G++ + F GD GF+ Sbjct: 1 MKK-YLSMLLLGVTALVAATAAQAGAIDDAVKRGTLKVGMDPTYMPFEMTDKRGDIIGFE 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +A++ ++ ++ + A + + D++ T R +L L F Sbjct: 60 VDILKAMAKSMGVK---LELVSTGYDGIIPAFLTGKFDMIGSGMTLTQER--NLRLNFSE 114 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVF 176 GQ ++ K+ I S L+ + + TT E+ + Sbjct: 115 PFIVVGQTLLIRKELEGTIKSYKDLNDEKYRLTSKLGTTGEMVAKKLIAKAKYHG----Y 170 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + +E + DA+ D + V L + + PLA + +GD + Sbjct: 171 DNEQEGVLDVVNGKADAFVYDAPYNVVAEKKVGNGK-LVFLDEPFTFEPLAFGLKKGDYD 229 Query: 237 WYNIVSWTHY 246 N ++ + Sbjct: 230 SINFINNFLH 239 >gi|153941473|ref|YP_001390529.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum F str. Langeland] gi|152937369|gb|ABS42867.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum F str. Langeland] gi|295318610|gb|ADF98987.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum F str. 230613] Length = 274 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 78/253 (30%), Gaps = 10/253 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVK-ANGDWKGF 59 +K F+S+ L++ + + A +IK+ +K G + F + + +GF Sbjct: 6 FKKIFLSM-SLVVTLGVALTACAQNNKEIKENKNTIKIGTSGQYYPFTFIDKDSNKVQGF 64 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D + P + + L + +ID ++ T + F Sbjct: 65 EIDIWEEIGKRTGYKPE---FKVADWTGIMGMLDTGKIDTVANEITVTD--KKKEKYYFS 119 Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFE 177 + G K I S+ L G ++ Q GT ++ DY + + Sbjct: 120 KPYVYSGVQLATKKGNNNIKSLKDLEGKTVATQVGTNYSKSIEDYNNKNKGEDIKTKQYN 179 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + R DA D A + + P ++ + E Sbjct: 180 SFSGMFQDVDLGRVDALIEDKLACLVNIKKSGLNLQLAGEPIEEMENAYPFVKKDENKEK 239 Query: 238 YNIVSWTHYAMVT 250 ++ M Sbjct: 240 IEKINKALDDMKN 252 >gi|56416145|ref|YP_153220.1| arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161617624|ref|YP_001591589.1| hypothetical protein SPAB_05484 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197365071|ref|YP_002144708.1| arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56130402|gb|AAV79908.1| arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161366988|gb|ABX70756.1| hypothetical protein SPAB_05484 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197096548|emb|CAR62158.1| probable arginine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 239 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 86/251 (34%), Gaps = 26/251 (10%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + L L + S +A L G + + V A+ GFD+D A+ Sbjct: 1 MLLASLSVHAASVSART---------LHFGTSATYAPYEFVDADNKIVGFDIDVANAVCK 51 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + ++ + + L+ K+ D + D T RE ++F Y Sbjct: 52 EM---QAECTFTNQSFDSLIPGLRFKKFDAVIAGMDMTPKRE--QQVSFSQPYYEGLSAV 106 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ +K + + L G + ++ GTT + L D P+ ++ + + Sbjct: 107 VVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYLNAFTDLKNN 162 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244 R + GD + A+ ++ I+ + S A+ +G+ ++ Sbjct: 163 RLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKGNDALLQEINAA 219 Query: 245 HYAMVTAEELG 255 + + E Sbjct: 220 LDKVKASPEYA 230 >gi|283853409|ref|ZP_06370655.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. FW1012B] gi|283571222|gb|EFC19236.1| extracellular solute-binding protein family 3 [Desulfovibrio sp. FW1012B] Length = 247 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 31/251 (12%), Positives = 76/251 (30%), Gaps = 25/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++++ + + S + + + V A+ + G+ Sbjct: 1 MVKKLALALVIVAMAASASLA------------KTIVFATDATWPPMEFVNADKEITGYA 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D+ +A ++ + F L S + + + + T R+ + F Sbjct: 49 IDYMKAAGKEAG---FTAEFKAVAWDGIFAGLASGKYNAICSSVSITDERK--NTMDFST 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q ++ K V + G ++ Q TT + + Y + Sbjct: 104 PYFKVRQALVVPVKSTAKCVDDMKGKTLGAQISTTGHFAIKKMEGIKDKSYDEVGL---- 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP---DIISKSPLAPAIIQGDTEW 237 R D D L N++ + + + A+ +G+ E Sbjct: 160 -AFEDLYNGRIDGVVCDDPVAAQYALQNEKYKGSLKIACIVEAGEDEFYGIAVQKGNKED 218 Query: 238 YNIVSWTHYAM 248 +++ A+ Sbjct: 219 LELINKGIEAV 229 >gi|269214285|ref|ZP_06158475.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria lactamica ATCC 23970] gi|269210116|gb|EEZ76571.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria lactamica ATCC 23970] Length = 275 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 65/224 (29%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFFTSFST--------------NASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L + S++ I +G + G Sbjct: 2 MLKKFVLGGIAALVLAACGGEGGSASSSAPAQSAGESGSLIERINNKGTVTVGTEGTYAP 61 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 62 FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 118 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + I S+ + G + KA Sbjct: 119 T-SPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTAQSLTSNYGE------KA 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 172 KAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215 >gi|66046800|ref|YP_236641.1| lysine-arginine-ornithine-binding periplasmic protein [Pseudomonas syringae pv. syringae B728a] gi|63257507|gb|AAY38603.1| Lysine-arginine-ornithine-binding periplasmic protein [Pseudomonas syringae pv. syringae B728a] gi|330972269|gb|EGH72335.1| lysine-arginine-ornithine-binding periplasmic protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 258 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 77/245 (31%), Gaps = 23/245 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L +L F+ LK GI FA +G GFD Sbjct: 1 MKKLMLIGAMALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + K ++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M + S+++L G I VQ GT E + + Sbjct: 106 KYYNSPARLVMKDGTTVSDSLAELKGKKIGVQRGTIHERFAREVLAPQG--VEVTPYGSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 EI A R D D + L L D + + A+ +GD Sbjct: 164 NEIYLDISAGRLDGTIADATLLQDGFLKTDAGKGYAFVGPSFFDPKYFGDGIGIAVRKGD 223 Query: 235 TEWYN 239 + Sbjct: 224 KANLD 228 >gi|324995219|gb|EGC27131.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK678] Length = 287 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 86/246 (34%), Gaps = 9/246 (3%) Query: 2 YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K + S+ + +L + +S ++ ++ G F+ +G G+D Sbjct: 16 KKTLKYFSLAAVSVLAIGALVACSSSSEKKTEKTKVEVGTVGTTKPFSYEDKDGKLTGYD 75 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ RA+ D ++ + F L S + I + N E + + Sbjct: 76 IEVLRAIFKD--SDKYEVNFNKTKWASIFSGLDSDRYQIGANNIS--YSEERANKYLYAS 131 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-- 178 + ++ K +GI S+ + G S V GT+T L DY K H+ I + Sbjct: 132 PYAKNPTVLVVRKGEGIKSLDDIGGKSTEVVQGTSTAQQLEDYNKEHSDNPTKINYTDGT 191 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237 +++I A R D + + + + ++ + P I G + Sbjct: 192 IQQILANLNDGRTDYKVFER-ITVESIIKDQGLNNLEVIELPSDQQPYVYPIIASGQEDL 250 Query: 238 YNIVSW 243 V+ Sbjct: 251 QKFVNK 256 >gi|225620105|ref|YP_002721362.1| family 3 extracellular solute-binding protein [Brachyspira hyodysenteriae WA1] gi|225214924|gb|ACN83658.1| extracellular solute-binding protein, family 3 [Brachyspira hyodysenteriae WA1] Length = 275 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 79/228 (34%), Gaps = 9/228 (3%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + L +K G L G++ NG+ GFD+D ++S + ++ Sbjct: 35 QEDNSLQRVKDSGKLVLGLDDTFAPMGFRDENGEIVGFDIDLAHEVASRMG---VVLETK 91 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSV 140 ++ + L +++ID+L + R++ + F + + H I+S+ Sbjct: 92 SIDWGKSSSILTNREIDVLWNGVNINNERKVYM--NFSKPYLNNMLIIVKHNDDETINSI 149 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G + VQ G E + ++ + + ++ DA+ D Sbjct: 150 DNLAGKIVGVQKGGNYEQIANHPIMSK--IKELRQYDENIKAFTDLQLNKLDAFITDD-V 206 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 +T + V+ + A + + D + + M Sbjct: 207 FAQYYITEKKAPFTVVHNTPFTDGLYAIGVNKSDKKLLEEIDRILDEM 254 >gi|206564613|ref|YP_002235376.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] gi|198040653|emb|CAR56639.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] Length = 267 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 87/254 (34%), Gaps = 22/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + L SF+ + S ++ GI+ F + +G GFD Sbjct: 1 MNRTAKLLVTALAFAPLASFAQDTST---------IRWGIDPTYPPFEAKQPDGSLAGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +K ++ AL++++ D++ T R + F Sbjct: 52 IDLRNAICEQL---HAKCVWVEQGFDGMIPALRARKFDVIMSAMTATDER--LKQIDFSN 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + + + + L+G I + GTT E + + ++ Sbjct: 107 KLYASPGALVAPVGSKLLPTAASLAGKRIGIDQGTTQEAYAKAEWATRG--VTIVSYQNQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +++ R DA D + L R + ++ + + A I +GD Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTPRGKGYAFAGPDVTDARITGYGVAMGIRKGD 224 Query: 235 TEWYNIVSWTHYAM 248 + ++ A+ Sbjct: 225 ADMKKRLNDAIVAI 238 >gi|134295216|ref|YP_001118951.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134138373|gb|ABO54116.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia vietnamiensis G4] Length = 264 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 74/219 (33%), Gaps = 13/219 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F +G GFD+D A+ + + +K ++ + ALQ Sbjct: 30 KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KTKCVWVENDFDGLIPALQ 86 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152 +++ D ++ + T R+ +AF Y I + G + + L G + V Sbjct: 87 ARKFDAINSDMTITEQRK--HAVAFTDPIYTIPNQLIAKQGSGLLPTPQALKGKRVGVLQ 144 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT E + + ++ + A ++ R DA D A L+ + Sbjct: 145 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGAKGFLSKPQGQ 202 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246 +S + + + + D + Sbjct: 203 GFAFAGGTVSDAEILGSGVGFGLRKNDAALKTALDQALK 241 >gi|330982767|gb|EGH80870.1| arginine/ornithine ABC transporter periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 244 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 78/241 (32%), Gaps = 25/241 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L +L F+ LK GI FA +G GFD Sbjct: 1 MKKLMLIGAMALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + K ++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M I S+++L G I VQ G+ E + + Sbjct: 106 KYYNSPARLVMKDGTTISDSLAELKGKKIGVQRGSIHERFAREVLAPKG--VEVTPYGSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233 EI A R D D + L L D + + P + A+ +G Sbjct: 164 NEIYLDIGAGRLDGTVADATLLQDGFLKTDAGKGYAFVG-PSFVDPKYFGDGIGIAVRKG 222 Query: 234 D 234 D Sbjct: 223 D 223 >gi|311695809|gb|ADP98682.1| glutamine ABC transporter, periplasmic glutamine-binding protein [marine bacterium HP15] Length = 252 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 21/252 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59 M + ++ + L + + +A L+ + V F + G+ GF Sbjct: 1 MSTKWLKTVSASLALTVAAGTVSAET---------LRVVTDPSFVPFEMMDQETGEMIGF 51 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D++ R ++ + I ++ ALQ+ +DI T RE + F Sbjct: 52 DMEIIREVADRAGFE---IDLNTMDFNGIIPALQTGNVDIAIAGITITEEREEI--VDFS 106 Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ + +S L G I + G+T+ L A + Sbjct: 107 DPYYDSGLRILVREGNDDVSEFDDLEGKKIGTKIGSTSYDYLVKNLDA---DDGVTPYPG 163 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++ A + DA D + + + A+ G +EW Sbjct: 164 SSDMYMALMSRAIDAVFYDAP-NVGYFARTKGEGKVTTVGPLYEGQQYGIALKSG-SEWV 221 Query: 239 NIVSWTHYAMVT 250 + V+ AM Sbjct: 222 DDVNEALAAMKE 233 >gi|307726172|ref|YP_003909385.1| cationic amino acid ABC transporter periplasmic-binding protein [Burkholderia sp. CCGE1003] gi|307586697|gb|ADN60094.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. CCGE1003] Length = 260 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 80/225 (35%), Gaps = 13/225 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K ++ G++ F ++G GFD+D + + + +K ++ + Sbjct: 23 KDWSTIRFGVDASYPPFESKGSDGKLVGFDIDLGNEICARL---KAKCVWVENDFDGMIP 79 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149 AL++K+ D + + T R + F + + K GI + L G ++ Sbjct: 80 ALKAKKFDGVLSSMSMTPQRAEQIA--FSSKLFNTPTRLVAKKGSGILPTAESLKGKTVG 137 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ GT E Y++ + ++ +++ A + R DA D L Sbjct: 138 VEQGTIQETYAKTYWEPKG--TKVVPYQNQDQVYADLLSGRLDAALQDAVQAEIGFLKTP 195 Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMV 249 R + + + + + + DT+ V ++ Sbjct: 196 RGAGFDFVGKNLDDPKILGNGAGIGMRKEDTDLKAKVDKAIADII 240 >gi|90419462|ref|ZP_01227372.1| putative solute-binding protein [Aurantimonas manganoxydans SI85-9A1] gi|90336399|gb|EAS50140.1| putative solute-binding protein [Aurantimonas manganoxydans SI85-9A1] Length = 259 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 79/238 (33%), Gaps = 18/238 (7%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 L + + A L G N G V + N + GF+VD + ++ Sbjct: 3 AAATTALLLVAGPSLAET---------LTAGANIGNVPWEFQDENSEIVGFEVDLLKKVA 53 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + D + + F A+QS +ID+ + T R ++F Y Q Sbjct: 54 DRLGYDE--VDIQNVPFNGLFSAVQSGRIDVAISSITITDER--LQSVSFAQPYYDSDQS 109 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 GI+ L G ++ V G+T ++ + + +E + A Sbjct: 110 LSTRADSGIAGSGDLKGKTVGVDTGSTGDIYSTERESEWGLAG-ISRYEGLSPAMLDLAA 168 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 R DAY DI A+ E ++ + + + + D+E + Sbjct: 169 GRIDAYVSDIPAVAYY---LKDKPEMKVVERLATGEQYSMMFAK-DSELAGKANEVLT 222 >gi|269963236|ref|ZP_06177570.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832041|gb|EEZ86166.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 273 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 85/256 (33%), Gaps = 20/256 (7%) Query: 1 MY--KDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K ++L L I + + + IK+RG L+ G++T V +A G+ Sbjct: 1 MKLFKATITALLGLAIALPSLANEEEAATPNVDQIKERGTLRVGMST-FVPWAMRNKQGE 59 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GF++D + L++ K++++P AL +K+ D++ T R S Sbjct: 60 LIGFEIDVAKRLAADTG---LKVEFVPTAWDGIIPALLAKKFDVIIGGMSITPER--SKS 114 Query: 116 LAFRPITYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + F G +K+ S I + G T + F Sbjct: 115 VLFTEPYSHSGVQVAANKELAAGFSEFSDFDSRRVKIAARRGAFTVQVARETFPKAK--- 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + F+ + A + + + + +SK A A+ Sbjct: 172 -ILQFDDDAQAFQEVLNGNAHAVIASSPKPEHEAIKHADKL-FIPFTERLSKGNEAFAVR 229 Query: 232 QGDTEWYNIVSWTHYA 247 G+ + + A Sbjct: 230 LGEEDKKAFFNEWIEA 245 >gi|330817961|ref|YP_004361666.1| Cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia gladioli BSR3] gi|327370354|gb|AEA61710.1| Cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia gladioli BSR3] Length = 258 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 84/224 (37%), Gaps = 13/224 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F V NGD GFDVD R + + I + ++ + Sbjct: 20 KEWKTVRIGVDASYPPFESVAKNGDIVGFDVDLTREICTRI---AVRCTWVAQDLDGIIP 76 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149 AL++++ D++ + T R + F Y I + +V+ L G ++ Sbjct: 77 ALKARKFDVIVSSLTVTDKR--REQIDFSDKLYDAPARMIAKAGSPLLPTVASLKGKTVG 134 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E Y++ + ++ +++ A R DA D L Sbjct: 135 VEQGSTQETYAKTYWETQG--VTIVPYQNQDQVYADLGTGRLDAALQDELQADYGFLRTP 192 Query: 210 RPSEH-VILPDIISKSPLA----PAIIQGDTEWYNIVSWTHYAM 248 R P++ + + + DT+ ++ AM Sbjct: 193 RGKGFAWAGPEVKDPKTIGDGTAIGLRKEDTDLKAKINAALAAM 236 >gi|300716054|ref|YP_003740857.1| Arginine-binding periplasmic protein 1 [Erwinia billingiae Eb661] gi|299061890|emb|CAX59006.1| Arginine-binding periplasmic protein 1 [Erwinia billingiae Eb661] Length = 244 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 75/213 (35%), Gaps = 12/213 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ F V ++ +GFDVD AL + + + +L+ Sbjct: 23 TIRFATEASYPPFEFVDSDNKIQGFDVDLANALCREM---NATCTFTNQAFDSLIPSLKF 79 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 ++ D + D T RE + F Y + FI K ++SV L G + VQ GT Sbjct: 80 RRFDAVMAGMDITPEREK--QVLFSKAYYDNSALFIAQKG-KVASVDALKGKRVGVQNGT 136 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PS 212 T + L + + + ++ + + R DA GD + + N P Sbjct: 137 THQKYLTEKM----TGVNAVPYDSYQNAILDLKNGRIDAVFGDTAVVNEWLKQNANLAPV 192 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + L A+ QG+ E + Sbjct: 193 GEKVTDKAYFGTGLGIAVRQGNAELQGQFNTAL 225 >gi|291086278|ref|ZP_06355258.2| putative ABC transporter, substrate binding protein [Citrobacter youngae ATCC 29220] gi|291068723|gb|EFE06832.1| putative ABC transporter, substrate binding protein [Citrobacter youngae ATCC 29220] Length = 297 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 88/253 (34%), Gaps = 8/253 (3%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + + +++ NA+ L I+ L G L F+ NG G+ + Sbjct: 17 QWLTLLAGIVVSPTLMAQQNAATLDHIQNSSVLNVGYRQ-LPPFSLTDNNGKVTGYTIAV 75 Query: 64 CRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 C ++ + I Y+P+N ERF AL +++ID+ T E ++F Sbjct: 76 CNMIADKLRQYLKLSSLTIHYIPVNFGERFSALNTRKIDMDCSV--NTNAPERMSSVSFS 133 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I +K I S+ L G ++ + + L + ++ I + Sbjct: 134 IDYYTAKMRIIALRKNNIHSIVDLKGRTVSLPGSSKDLLEFNKANREQHLNISTITTTTI 193 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEWY 238 + A D + L +++P + I + A + + D ++ Sbjct: 194 NGAFDKMAHNEAAALFLDDVLAWPLIKDSEQPELFSMSAQSIGNDMHYAIMMRKNDPQFV 253 Query: 239 NIVSWTHYAMVTA 251 V+ T + Sbjct: 254 TFVNSTLKDFFAS 266 >gi|271501947|ref|YP_003334973.1| Prephenate dehydratase [Dickeya dadantii Ech586] gi|270345502|gb|ACZ78267.1| Prephenate dehydratase [Dickeya dadantii Ech586] Length = 255 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 85/257 (33%), Gaps = 15/257 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + +L L ++ AS L +++RG LK + ++A+G ++G D Sbjct: 1 MKKRFSLMLL----LGLAGSASAASHLDQVQERGVLKVCTTGDYKPYTSLRADGSYEGID 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + ++L+ ++ ++++ + K QS Q DI TL R+ + Sbjct: 57 IAMAQSLAKSLGVK---VEWVKTSWKTLMPDFQSDQCDIAMGGISVTLERQKKAFFSNTL 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIVFER 178 K +V+Q++ S+ V T E + + + + Sbjct: 114 DVDGKIPLVRCDDKDKYQTVAQINQPSVRVIEPAGGTNEAFVHAHLPNAH-----LALHD 168 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I + D D S + + + A + + D W Sbjct: 169 NVTIFQQLVDKQADVMITDASEALYQQKRYPQLCAVNPASPMQYGE-KAYMLPRDDMSWK 227 Query: 239 NIVSWTHYAMVTAEELG 255 V + + E Sbjct: 228 LYVDQWLHLSKSTGEYR 244 >gi|254804665|ref|YP_003082886.1| polar amino acid transport system substrate-binding protein [Neisseria meningitidis alpha14] gi|254668207|emb|CBA04961.1| polar amino acid transport system substrate-binding protein [Neisseria meningitidis alpha14] Length = 274 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 65/224 (29%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L + + S++ I +G + G Sbjct: 1 MLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAVSGSLIERINNKGTVTVGTEGTYAP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ A++ + +++ L++ + D+++ Sbjct: 61 FTYHDKDGKLTGYDVEVTLAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + I S+ + G + KA Sbjct: 118 T-SPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTAQSLTSNYGE------KA 170 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 171 KAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214 >gi|226313901|ref|YP_002773797.1| L-cystine ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] gi|226096851|dbj|BAH45293.1| L-cystine ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] Length = 275 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 40/232 (17%), Positives = 72/232 (31%), Gaps = 15/232 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + + ++L +K L G F +G G+DV+ ++ + +P + Sbjct: 39 AASQNLLEKVKAEKKLVIGTEGTYSPFTFHNQSGTLTGYDVEVITEVAKRLGVEP---VF 95 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISS 139 F L SK+ D+++ + F + HK + Sbjct: 96 QETQWDAMFAGLDSKRFDVIANQVGI--RPDRQEKYDFSKSYTISRAVLVTHKDNNTVKD 153 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI- 198 + G Q+ T+ LA +A + + + R D D Sbjct: 154 FKDIKGLKAG-QSMTSNYADLARSHEA-----EIVGVDNFNQAIDLIAQKRVDVVINDNL 207 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 S L LK D P ++ P A +G TE + V+ M Sbjct: 208 SVLDFLKQKPDTPI--KVVAKNTEGQPTAFMFRKGSTELIDAVNKVLDEMQQ 257 >gi|295103460|emb|CBL01004.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Faecalibacterium prausnitzii SL3/3] Length = 275 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 95/276 (34%), Gaps = 35/276 (12%) Query: 1 MYKDFFVSI----LCLIILFFTSFST---NASI--------LGDIKKRGFLKCGINTGLV 45 M + F+S+ +L T S+ +S L I+K G L + Sbjct: 1 MKRRTFISLMGVMAAAGVLGLTGCSSKDTASSTAGPAPLNKLNSIQKSGKLVVALEGAWQ 60 Query: 46 GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 ++ A+ G+DV+ RA++ + +P Y+ + F L + + D++ + Sbjct: 61 PWSYHDASDTLVGYDVEVSRAIAEKLGVEPE---YVESDWDSLFAGLDAGRYDMVCNGVE 117 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYF 164 T R + F + + K I+S L G + +T LA+ + Sbjct: 118 VTEERAKTYA--FTTPYGYIHTALAVRKDNTDITSFEDLKGKTTANSLASTYME-LAESY 174 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 A + +EE A R DA + Y + + ++ S Sbjct: 175 GA-----TVQGIDTLEETIQLLTAGRIDATLNADVSFYDYLNVHPDA-DFKLVAQTAEAS 228 Query: 225 PLA-PAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 +A P + DT + + ++ EEL Sbjct: 229 HVAIPVLKSEDTAYLDALNTAI------EELRADGT 258 >gi|325271441|ref|ZP_08137966.1| cationic amino acid ABC transporter periplasmic binding protein [Pseudomonas sp. TJI-51] gi|324103423|gb|EGC00745.1| cationic amino acid ABC transporter periplasmic binding protein [Pseudomonas sp. TJI-51] Length = 261 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 82/254 (32%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L + S + LK GI FA + +G GFD Sbjct: 1 MKKLALLGALALSVFSLVSQADEKP----------LKIGIEAAYPPFAFKQPDGSIAGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + +K ++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCEEM---KAKCTWVEQEFDGLIPALKVRKIDAILSSMSITEDRKK--SVDFTK 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M + +S L G I VQ G+ + + A + + Sbjct: 106 RYYLTPARLVMKEGTTVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKG--ATVVPYGTQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 EI A R D D + L L D + + + A+ +GD Sbjct: 164 NEIYLDVAAGRLDGTVADATLLEDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGD 223 Query: 235 TEWYNIVSWTHYAM 248 ++ A+ Sbjct: 224 DANRERINKAIDAI 237 >gi|296117710|ref|ZP_06836294.1| glutamate-binding protein [Corynebacterium ammoniagenes DSM 20306] gi|295969441|gb|EFG82682.1| glutamate-binding protein [Corynebacterium ammoniagenes DSM 20306] Length = 292 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 42/282 (14%), Positives = 90/282 (31%), Gaps = 26/282 (9%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGINTGLVGFAEV 50 M + +I+ + + + + +LG I + G + G G Sbjct: 1 MSRSITRIAAIIGSVAISGSLLAACGDSGGGDSEGLLGSI-EAGNVTLGTKFDQPGLGLR 59 Query: 51 KANGDWKGFDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + +G G DVD +++ + I + + +R +Q+ ++D+++ Sbjct: 60 EPDGSMTGLDVDVATYVVNSIAEENGWEEPSIDWREAPSAQRETLIQNGEVDMITATYSI 119 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFK 165 R S + F Q ++ IS + L G +C G+T + + Sbjct: 120 NPGR--SESVNFGGPYLLTHQALLLQDGNDEISGLDDLDGKILCSVTGSTPAQKVKEALP 177 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL---PDIIS 222 ++ A R DA T D + L + V L + + Sbjct: 178 ----TVQLQEYDTYSSCTEALRQGNVDAMTTDATILNGYAAQSPGNFRVVELEQDGEPFT 233 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-ITQKNINQ 263 + + D E + ++ AM+ N+ + Sbjct: 234 NEYYGIGLTKDDEEGTDAINTALQAMIDDGSFDQFISDNLGE 275 >gi|170694557|ref|ZP_02885709.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia graminis C4D1M] gi|170140439|gb|EDT08615.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia graminis C4D1M] Length = 264 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 101/279 (36%), Gaps = 24/279 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ + L + + + ++ DIK+ ++ G+ F +G+ +GFD Sbjct: 1 MKMNWRNTA-ALALFAMATLTAASASAADIKE---VRFGVEASYAPFESKSPSGELQGFD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + + +K ++ + ALQ+++ + ++ + T R + F Sbjct: 57 IDVGNAVCAKL---KAKCVWVENSFDGLIPALQARKFNAINSDMTITEQR--RQAIDFTD 111 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K G+ + + L G + V GT E + + + ++ Sbjct: 112 PIYTIPNQMIAKKGSGLQPTPASLKGKHVGVLQGTIQETYAKARWAPAGVD--VVPYQTQ 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 ++I A + R DA D A L + + ++ L I +GD Sbjct: 170 DQIYADLSSGRLDASFQDAEAASKGFLKKPQGAGFEFAGPAVTDEKLLGAGVGFGIRRGD 229 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 + ++ EL I++ + + V Sbjct: 230 KALKDALNQALK------ELKADGT-IDRFAAKYFDVKV 261 >gi|307244569|ref|ZP_07526674.1| bacterial extracellular solute-binding protein, family 3 [Peptostreptococcus stomatis DSM 17678] gi|306492096|gb|EFM64144.1| bacterial extracellular solute-binding protein, family 3 [Peptostreptococcus stomatis DSM 17678] Length = 281 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 89/253 (35%), Gaps = 17/253 (6%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWKGFDVDFCRALSSAIFDDPS 76 N + L IKK L + F + G D+D + ++ + + Sbjct: 32 SGGNQTALEQIKKNKKLVVATSPDYPPFEFMVSENGKSKIVGADIDLAQKIADKLGVE-- 89 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK- 135 ++ ++ ALQ+ ++D++ R+ + F I + I++ K Sbjct: 90 -LELKAMDFDALLPALQAGKVDMVITGMTPNEKRKK--AVDFSDIYFKGENAVIVNAKDA 146 Query: 136 -GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 +S QL A + VQ G+T E + D K N K V ++ A + DA Sbjct: 147 GKFTSEDQLKKAKLGVQKGSTQETYVKDNLKVTNYK----ALVAVPDLIADMKNGNIDAV 202 Query: 195 TGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDT-EWYNIVSWTHYAMVTA 251 + D + E++ L + +A AI +GD + + + + + Sbjct: 203 VLNSKVAGINVTKYDGIKVVENLKLTSGGDEEAMAVAIKKGDNADLIKLTNEVIKELQDS 262 Query: 252 EELGITQKNINQV 264 E N + Sbjct: 263 GEYDKILANAVDL 275 >gi|125717448|ref|YP_001034581.1| L-cystine ABC transporter, substrate-binding component, putative [Streptococcus sanguinis SK36] gi|125497365|gb|ABN44031.1| L-cystine ABC transporter, substrate-binding component, putative [Streptococcus sanguinis SK36] Length = 275 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 9/246 (3%) Query: 2 YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K + S+ + +L + +S ++ ++ G F+ +G G+D Sbjct: 4 KKTLKYFSLAAVSVLAIGALVACSSSSEKKTEKTKVEVGTVGTTKPFSYEDKDGKLTGYD 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ RA+ D ++ + F L S + I + N E + + Sbjct: 64 IEVLRAIFKD--SDKYEVNFNKTKWASIFSGLDSDRYQIGANNIS--YSEERANKYLYAS 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-- 178 + ++ K +GI S+ + G S V GT+T L DY K H+ I + Sbjct: 120 PYAKNPTVLVVRKGEGIKSLDDIGGKSTEVVQGTSTAQQLEDYNKEHSDNPTKINYTDGT 179 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237 +++I A R D + + + ++ + P I G + Sbjct: 180 IQQILANLNDGRTDYKVFER-ITVESIIKDQGLKNLEVIELPSDQQPYVYPIIASGQEDL 238 Query: 238 YNIVSW 243 V+ Sbjct: 239 QKFVNK 244 >gi|226314898|ref|YP_002774794.1| amino acid ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] gi|226097848|dbj|BAH46290.1| probable amino acid ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] Length = 267 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 71/213 (33%), Gaps = 8/213 (3%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G + F ++A+ G D+D A++ A KI++ F L Sbjct: 44 KVYVVGTDAAYPPFQMLEAD-KISGHDIDVMNAIAEAGG---FKIEWKNTGWDPLFDGLD 99 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 +DI + T R+ F + Q ++ + ++ ++ L G I VQA Sbjct: 100 KGTVDIGISSITITEKRKE--KYDFSDSYFEANQLILVAEDSPVTKLADLKGKKIGVQAA 157 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT E + F ++ + + R DA GD L Sbjct: 158 TTGEEVVKKAFGDTYEG--LKGYDDMPSSVDDFFNGRVDAVIGDNGVLSYYVNKVKDKKF 215 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 +I D K + +G+ + N ++ Sbjct: 216 KLIKDDSFEKEFYGIIVKKGNADAINKINDGLK 248 >gi|149183273|ref|ZP_01861716.1| amino acid ABC transporter (amino acid-binding protein) [Bacillus sp. SG-1] gi|148849033|gb|EDL63240.1| amino acid ABC transporter (amino acid-binding protein) [Bacillus sp. SG-1] Length = 245 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 73/229 (31%), Gaps = 13/229 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S+ I++ G L G F +G+ GFDV+ R ++S + +P + Sbjct: 10 EQSLYEQIQENGELLIGTEGTYPPFTFHDESGELTGFDVEIAREVASRLGVEP---VFKE 66 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVS 141 F L S + D+++ + F + K+ ++S Sbjct: 67 TQWDAMFEGLNSNRFDMIANQVGI--REDRQEKYDFSIPYIESSAVLVASKENEEVNSFE 124 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + G + Q+ T+ +A+ + A + + + R D D ++ Sbjct: 125 DIDGLTSA-QSLTSNYKDIAESYGA-----EIQGVDGLAQAIQLVEQDRVDVTINDKLSI 178 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 I+ + + +G+ + V+ M+ Sbjct: 179 LDYLQKQKN-VGIEIVATEENAAQSGLMFRKGNEKLVEEVNKALEEMME 226 >gi|251793714|ref|YP_003008444.1| L-cystine-binding protein TcyA [Aggregatibacter aphrophilus NJ8700] gi|247535111|gb|ACS98357.1| L-cystine-binding protein TcyA [Aggregatibacter aphrophilus NJ8700] Length = 259 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 81/262 (30%), Gaps = 21/262 (8%) Query: 1 MYKDFFV--SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K +L + L + + I ++K L G F +G G Sbjct: 1 MKKSLLAKTLLLSGLALGIATQAMAGEISDRVEKTKTLLVGTEGTYAPFTFHDDSGKLTG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ A++ + IQ+ + L +K+ D+++ T E + Sbjct: 61 FDVEVIEAVAQRL---SLTIQFNETQWDSMYAGLNAKRFDLIANQT--NPSPERLKKYLY 115 Query: 119 RPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + + + I + L G Q+ T+ +A A IV + Sbjct: 116 TAPYNYSTAVIVTKEGDDSIKTFEDLKGKK-ATQSLTSNYGKIAKANGA-----ELIVVD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R + D A+ + + K P A+++G+ Sbjct: 170 GLAQALKLITQDRAETTVNDQLAVLDYFKKQPNSGLKIAVK-RDEKVPSGFAVLKGEEPL 228 Query: 238 YNIVSWTHYAMVTAEELGITQK 259 ++ T EEL Sbjct: 229 VEKINQTL------EELRKDGT 244 >gi|227514072|ref|ZP_03944121.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus fermentum ATCC 14931] gi|227087553|gb|EEI22865.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus fermentum ATCC 14931] Length = 266 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 77/254 (30%), Gaps = 21/254 (8%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKK-----RGFLKCGINTGLVGFAEVKANG 54 M K +S++ ++ + + + +G L G+ ++ NG Sbjct: 1 MKKWMKRLSVVAASLVAMVALAACGKSSSSSSEPQLVTKGTLTVGLEGTYAPYSYR-ENG 59 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GF+VD R L+ + ++++P + SK+ D+ + T R+ Sbjct: 60 KLTGFEVDLARDLAKKMGYK---VKFVPTKWDSLIAGVGSKKFDVAINDIAMTPERQK-- 114 Query: 115 GLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + IM I S+ + G I GT + Sbjct: 115 SYLFSTPYIYSKSALIMKSDNTTIKSIDDIKGKKIAAATGTANAQNV------KKFGGET 168 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRPSEHVILPDI-ISKSPLAPAII 231 + R R +A A Y K T ++ +P I + + Sbjct: 169 VSSTDFSTAMELVRQGRAEAALNSKEAFLYYQKSTGTTDLKYQEVPSSKIPVQKIGVLMA 228 Query: 232 QGDTEWYNIVSWTH 245 + + V+ Sbjct: 229 KNNKGLQTKVNKAL 242 >gi|323529956|ref|YP_004232108.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323386958|gb|ADX59048.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 273 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 78/233 (33%), Gaps = 11/233 (4%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 L S + +A L +I K G ++ G+ F + + G+D+D + A+ Sbjct: 27 GALTAFSPAAHADALDNIAKTGTVRIGVFMDYPPFGSIGPDMKPMGYDIDVANLIGKAL- 85 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +K++ + + R L + D+L T RE + F Sbjct: 86 --NAKVELVQVTGDNRMAYLADHKADMLLS-VGQTPEREKV--IDFSQPYAPYYLAVFGP 140 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K + + + L+G SI V GT +L+++ + F+ +A+ + + Sbjct: 141 KALTVKNAADLAGKSISVARGTLEDLSVSKIAP---PTANIKRFDDPNGAISAFISGQVQ 197 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + P+ + SP + + + + T Sbjct: 198 LMVVGNDVGATILAR--HPANDPEQKFSLFSSPDHVGLNKNEPRLKQKIDETI 248 >gi|150402397|ref|YP_001329691.1| extracellular solute-binding protein [Methanococcus maripaludis C7] gi|150033427|gb|ABR65540.1| extracellular solute-binding protein family 3 [Methanococcus maripaludis C7] Length = 254 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 89/250 (35%), Gaps = 12/250 (4%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 ++ + +I F S+ + G L GI L NG+ KG+D+D Sbjct: 8 VIIASILIITSFSGCISSYGMDSDTV-TPGVLTIGITPSLPPLEYY-ENGELKGYDIDLM 65 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + P + + + AL + +ID + + E + F Sbjct: 66 KEIAYKMGLKPE---FKIYSYEGAQKALLNGEIDCIPSTA---ISPERKEKMDFSRAYVQ 119 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + + + L+G ++ V T TE Y + + +E V+ + + Sbjct: 120 TYMVIAVFESSSYREIKDLNGKNVAVIKNTYTEDWANFYLGS--TTANIKPYESVDSLMS 177 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + DA D ++ + + ++ + I+ A A+ +G+ + ++ Sbjct: 178 DVESGNLDAVVTD--QIHMDYYAHKNNLDARMISEKITIIYWAIAVKKGNNGLQDQINDA 235 Query: 245 HYAMVTAEEL 254 + + E L Sbjct: 236 LFELEEDEAL 245 >gi|87121344|ref|ZP_01077234.1| putative periplasmic binding abc transporter protein [Marinomonas sp. MED121] gi|86163501|gb|EAQ64776.1| putative periplasmic binding abc transporter protein [Marinomonas sp. MED121] Length = 258 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 94/255 (36%), Gaps = 25/255 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGF 59 M ++ + ++ F S + A +K GI T F+ A+G++ G+ Sbjct: 1 MKLKASIAYISAFVIGFFSTTLAAQT---------IKVGIATEPYPPFSVPDASGNYSGW 51 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D +A+ + D + + AL SK+ID+++ + T R+ + F Sbjct: 52 EIDIAKAICAQAKLD---CEIVATAWDGIIPALLSKKIDVVAASLSITADRKRV--IDFS 106 Query: 120 PITYFDGQGFIMHKKKGISS-VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G I K SS ++L I +QA + + K + ++ Sbjct: 107 DKYYQSGASIIGSKNANFSSTPAELDNKIIGLQAASIHV----KFAKKYYPNATIKEYQS 162 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE-----HVILPDIISKSPLAPAIIQG 233 +E + + R DA D L + + + + + + + + +G Sbjct: 163 QDEANQDLYSGRIDATQADALTLESFLNSEQGKNCCDLKGMAVNDESLLGEGIGFGLRKG 222 Query: 234 DTEWYNIVSWTHYAM 248 + E ++ A+ Sbjct: 223 NPELKEQLNNAIDAI 237 >gi|294789055|ref|ZP_06754295.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Simonsiella muelleri ATCC 29453] gi|294483157|gb|EFG30844.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Simonsiella muelleri ATCC 29453] Length = 269 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 89/258 (34%), Gaps = 19/258 (7%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKR---------GFLKCGINTGLVGFAE 49 M + F VS + + ++ + + L+ G N F Sbjct: 1 MKLNQWFTVSCAAMALAACGGSQSSGNTAPPVASSANPTATTGEKVLRIGTNAEFAPFES 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 + + +GFD+D ++ K+++ F +L +K +D ++ T Sbjct: 61 LNEKQEIQGFDIDLLNEMAK---VGHFKVEFKHTPWDGIFASLDNKDVDAVASAVTITDD 117 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHN 168 R+ ++ F Y Q ++ K + +V L + V +G T +L F A Sbjct: 118 RKKTM--DFSEPYYKITQVVLIPPSKTVKNVDDLKKLPKVGVVSGQTGDLAAQKIFGA-- 173 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + F+ V + DA D + + N ++ + Sbjct: 174 TSPNIARFDTVTLLTKEVENGGVDAGISDSAVIANYIKNNTNKGFSMVQIPDFQEEHYGF 233 Query: 229 AIIQGDTEWYNIVSWTHY 246 A+ +GDTE N+++ + Sbjct: 234 AVRKGDTETLNLLNDSLK 251 >gi|161502501|ref|YP_001569613.1| hypothetical protein SARI_00545 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863848|gb|ABX20471.1| hypothetical protein SARI_00545 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 260 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 89/245 (36%), Gaps = 20/245 (8%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ G + F A G+ GFD+D + L I ++ ++ +L++ Sbjct: 27 KIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153 K+ID + + T R +AF Y ++ K I +V+ L G + V G Sbjct: 84 KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVASLKGKRVGVLQG 141 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT E +++ + + ++ + I + A R DA D A L Sbjct: 142 TTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKT 199 Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + + L + + D E ++ +A + A+ +++K Sbjct: 200 YKFGGPSVKDEKLFGVGTGMGLRKEDNELRETLNKA-FAEMRAD------GTYEKLAKKY 252 Query: 269 TNPDV 273 + DV Sbjct: 253 FDFDV 257 >gi|161525288|ref|YP_001580300.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189349974|ref|YP_001945602.1| polar amino acid transporter substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|160342717|gb|ABX15803.1| extracellular solute-binding protein family 3 [Burkholderia multivorans ATCC 17616] gi|189333996|dbj|BAG43066.1| polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] Length = 264 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 74/219 (33%), Gaps = 13/219 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F +G GFD+D A+ + + +K ++ + ALQ Sbjct: 30 KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KAKCVWVENDFDGLIPALQ 86 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152 +++ D ++ + T R+ +AF Y I + G+ + L G + V Sbjct: 87 ARKFDAINSDMTITDQRK--HAIAFTDPIYTIPNQLIAKQGSGLQPTPQSLKGKRVGVLQ 144 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT E + + ++ + A ++ R DA D A L+ + Sbjct: 145 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGAKGFLSKPQGQ 202 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246 +S + + + + D + Sbjct: 203 GFAFAGGTVSDAEILGSGVGFGLRKNDAALKTALDQALK 241 >gi|56697873|ref|YP_168244.1| polar amino acid ABC transporter periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3] gi|56679610|gb|AAV96276.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3] Length = 277 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 87/239 (36%), Gaps = 13/239 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + L + L + + I++RG + G+ + +G Sbjct: 1 MKHLIATTALASLTLAPIAATAAECTNDAWNRIQERGKIVVGVKADYKPWGFRDTDGSII 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G ++D ++ + + ++ P+ A R L+ QID++ R +G+ Sbjct: 61 GMEIDMAAEVAKTLGVE---LELTPVVASNRMQFLEQGQIDLMIATMTDRADRREIVGIV 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 P Y G + K G SS ++L+G +C G + D + A + F Sbjct: 118 -GPNYYTSGTNILAPKALGFSSWNELNGKPVCGVQGAFYNQIVEDKYGA-----QIVAFA 171 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E A R +C A+ D S++ + + + + SP A+ +G+ Sbjct: 172 GAAEARQALRDKKCVAFVYDDSSI-GSAIASGEWEDFEMPLASEDDSPWGLAVPKGEEN 229 >gi|317492511|ref|ZP_07950939.1| lysine-arginine-ornithine-binding periplasmic protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919503|gb|EFV40834.1| lysine-arginine-ornithine-binding periplasmic protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 247 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 78/247 (31%), Gaps = 22/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M S+ L + S L +T V F + + + GFD Sbjct: 1 MKSIIKASVAALTLALAMSSHAAE---------KQLIVATDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + P++ LQ++ +D+ T R+ + F Sbjct: 51 IDLWDAIAKQL---NLSYTLKPMDFSGIIPGLQTRNVDLALAGISITDERKK--AIDFSD 105 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ K + SV L G + V++GT DY KA+ F + Sbjct: 106 GYYNSGLLVMVKKDNNDVKSVKDLDGKVVAVKSGTAGV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + DA D + T + + D + A +G ++ Sbjct: 162 DNAYLELGTGNADAVLHDTPNILYFIKTAGHG-QFKAVGDSLEAQQYGIAFPKG-SDLRE 219 Query: 240 IVSWTHY 246 V+ Sbjct: 220 KVNGALK 226 >gi|224371142|ref|YP_002605306.1| ABC-type amino acid transport system, periplasmic amino acid-binding protein [Desulfobacterium autotrophicum HRM2] gi|223693859|gb|ACN17142.1| ABC-type amino acid transport system, periplasmic amino acid-binding protein [Desulfobacterium autotrophicum HRM2] Length = 277 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 81/251 (32%), Gaps = 22/251 (8%) Query: 4 DFFVSILCLIILFFT-------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 FF + + ++L + S + + K G L+ G++T V +A G Sbjct: 9 TFFTTAVVALVLACATIIPQVYAAPNGESTVEQVMKNGVLRVGMST-FVPWAMKDKTGKL 67 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GF++D L+ + +Q++P AL + + DI+ R +L + Sbjct: 68 MGFEIDVATRLAKDMGVK---VQFIPTKWSGIIPALLTGKFDIIIGGMGILPSR--NLKV 122 Query: 117 AFRPITYFDGQGFIM----HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F + G K + + G+T + Y Sbjct: 123 NFSIPYDYTGMSMAASTTLAKDFSGLEAFNQKDVVLSARLGSTGVAAIKKYLP----NAS 178 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 +F+ + R + + + L + ++ P+ A+ + Sbjct: 179 IRMFDDEAQAFQEAINGRVHGVVSSAPTPAFQAIKHPTKL-FLPLKENFTREPIGFAVKK 237 Query: 233 GDTEWYNIVSW 243 GD + N ++ Sbjct: 238 GDFDTINFLNN 248 >gi|308178340|ref|YP_003917746.1| L-cystine ABC transporter substrate-binding protein TcyA [Arthrobacter arilaitensis Re117] gi|307745803|emb|CBT76775.1| L-cystine ABC transporter, substrate-binding protein TcyA [Arthrobacter arilaitensis Re117] Length = 275 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 71/238 (29%), Gaps = 14/238 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + + L ++ G L G F+ + + + G+DV+ A+ + + + Sbjct: 38 GSAETGATLKKVQDSGVLTVGTEGTYRPFSFHEGD-ELTGYDVEVIEAVGEKMGVE---V 93 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 ++ F L + + D+++ RE F + Sbjct: 94 KFQETQWDAIFAGLDAGRFDVIANQVSINPEREE--KYLFSEPYTVSTGVVVTKSDNSDI 151 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + Q Q+ T+ + K K P+ + + R DA D Sbjct: 152 TSFQTLKGKTTAQSLTS---NFYETAKDAGAKVEPVE--GWAQSITLLKQGRVDATVNDK 206 Query: 199 SALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 L P + + + + +S A A+ + E + + EL Sbjct: 207 LTF--LDAQKTNPDDSIKIAAESEEQSKSAVALRKDSPELAKAIDSALEELRADGELA 262 >gi|91777939|ref|YP_553147.1| ABC lysine/arginine/ornithine transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|91690599|gb|ABE33797.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 260 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 80/225 (35%), Gaps = 13/225 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K ++ G++ F ++G GFD+D + + + +K ++ + Sbjct: 23 KDWSTIRFGVDASYPPFESKGSDGKLVGFDIDLGNEICARL---KAKCVWVENDFDGMIP 79 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149 AL++K+ D + + T R + F + + K GI + L G ++ Sbjct: 80 ALKAKKFDGVLSSMSMTPQRAEQIA--FSSKLFNTPTRLVAKKGSGILPTAESLKGKTVG 137 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ GT E Y++ + ++ +++ A + R DA D L Sbjct: 138 VEQGTIQETYAKTYWEPKG--AKVVPYQNQDQVYADLLSGRLDAALQDAVQAEIGFLKTP 195 Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMV 249 R + + + + + + DT+ V ++ Sbjct: 196 RGAGFDFVGKDLEDPKILGNGAGIGMRKEDTDLKTKVDKAIAEII 240 >gi|28869031|ref|NP_791650.1| arginine/ornithine ABC transporter periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213968638|ref|ZP_03396780.1| arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. tomato T1] gi|301385503|ref|ZP_07233921.1| arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302059837|ref|ZP_07251378.1| arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. tomato K40] gi|302132498|ref|ZP_07258488.1| arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28852271|gb|AAO55345.1| arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213926571|gb|EEB60124.1| arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. tomato T1] gi|331017445|gb|EGH97501.1| arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 258 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 79/245 (32%), Gaps = 23/245 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L +L +F+ LK GI FA +G GFD Sbjct: 1 MKKLMLIGALALSVLAQPTFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + +K ++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCEEM---KAKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M + S+++L G I VQ G+ E + + Sbjct: 106 KYYNSPARLVMKDGVTVSDSLAELKGKKIGVQRGSIHERFAREVLAPKG--VEVTPYGSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 EI A R D D + L L D + + A+ +GD Sbjct: 164 NEIYLDIGAGRLDGTIADATLLQDGFLKTDSGKGFAFVGPAFTDPDYFGDGIGIAVRKGD 223 Query: 235 TEWYN 239 + Sbjct: 224 KANLD 228 >gi|327188021|gb|EGE55251.1| amino acid ABC transporter substrate-binding protein [Rhizobium etli CNPAF512] Length = 276 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 45/224 (20%), Positives = 72/224 (32%), Gaps = 13/224 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFD 60 K ++ + I + A L IK RG L G+ F + + KG++ Sbjct: 4 KILPKALFAMSISLLAATQAFADATLDRIKARGALTVGVILSGAPFGYIDPTSQTQKGYN 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL+ + I + R LQ ++DIL N +T R L P Sbjct: 64 LDIAKALADDLGVKLETIT---VTPPNRVQFLQQGKVDILIANMQYTEDRAKVLDWVPTP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G + K G+ + L G +CV G+ L + + A Sbjct: 121 -YDRSGGAAVGRKDSGLKDWADLKGKPVCVSQGSNYTQPLIEKYGA-----EVKGLPSQP 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 E A + C L DRP + + Sbjct: 175 ESLLALQGGNC--VVAVHVGATLGLLLQDRPEDWKDYAILFPTE 216 >gi|19553156|ref|NP_601158.1| glutamate ABC-type transporter, periplasmic component [Corynebacterium glutamicum ATCC 13032] gi|62390791|ref|YP_226193.1| glutamate binding protein [Corynebacterium glutamicum ATCC 13032] gi|1346149|sp|P48242|GLUB_CORGL RecName: Full=Glutamate-binding protein; Flags: Precursor gi|732702|emb|CAA57061.1| gluB [Corynebacterium glutamicum] gi|21324721|dbj|BAB99344.1| ABC-type transporter, periplasmic component (glutamate) [Corynebacterium glutamicum ATCC 13032] gi|41326129|emb|CAF20292.1| GLUTAMATE SECRETED BINDING PROTEIN [Corynebacterium glutamicum ATCC 13032] Length = 295 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 80/252 (31%), Gaps = 19/252 (7%) Query: 6 FVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + L + T+ ++ L I + G + G G + G DVD Sbjct: 13 ILGATALAGVTLTACGDSSGGDGFLAAI-ENGSVNVGTKYDQPGLGLRNPDNSMSGLDVD 71 Query: 63 FCRA----LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 ++ D I++ + +R +Q+ ++D+++ R S + F Sbjct: 72 VAEYVVNSIADDKGWDHPTIEWRESPSAQRETLIQNGEVDMIAATYSINAGR--SESVNF 129 Query: 119 RPITYFDGQGFIMHK-KKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 Q ++ + I ++ L +G +C +G+T + D + Sbjct: 130 GGPYLLTHQALLVRQDDDRIETLEDLDNGLILCSVSGSTPAQKVKDVLP----GVQLQEY 185 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP---SEHVILPDIISKSPLAPAIIQG 233 + A DA T D + L+ + E + + + + Sbjct: 186 DTYSSCVEALSQGNVDALTTDATILFGYSQQYEGDFRVVEMEKDGEPFTDEYYGIGLKKD 245 Query: 234 DTEWYNIVSWTH 245 D E + ++ Sbjct: 246 DQEGTDAINAAL 257 >gi|330831200|ref|YP_004394152.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Aeromonas veronii B565] gi|328806336|gb|AEB51535.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Aeromonas veronii B565] Length = 245 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 82/256 (32%), Gaps = 30/256 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ + L TS +K F + +++GFD Sbjct: 1 MKKSLL--LVAAMGLLSTSVMA-----------KEIKFATEATYAPFEYLDDKNEFQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D RA+ + + +L+ ++ D D T R + F Sbjct: 48 IDLARAICEQA---KLECSFHNQAFDSLIPSLKFRRYDAAIAAMDVTPERAA--QVDFSD 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y + F+ K ++ ++ VQ GT+ + L D + + + + + Sbjct: 103 IYYENSAVFVAKKG-AFKGPEEMVDKTVGVQNGTSHQSYLVDNWVSKG--LLTVPYASYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 R D D + + E+ ++ ++ + A+ +G+ Sbjct: 160 SAFLDMMNGRTDGVFADTAVAADWLKQHK---EYAVVGTPVTDAKYFGTGFGIAVAKGNQ 216 Query: 236 EWYNIVSWTHYAMVTA 251 E ++ A + A Sbjct: 217 ELLTQLNKGL-AEIKA 231 >gi|310766721|gb|ADP11671.1| Putative amino acid ABC transporter, substrate binding protein [Erwinia sp. Ejp617] Length = 261 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 76/200 (38%), Gaps = 10/200 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 A L DI+KRG L+ + F V + +G+D+D L+ + K+Q + Sbjct: 21 ARADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMATYLARQM---KLKLQLV 77 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 P+ + R LQ+ ++D++ + RE + F G ++ + S + Sbjct: 78 PVTSANRVPYLQTDKVDLVISSLGKNPEREKV--IDFSRAYAPFFLGVFGPQQGTLKSAA 135 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 +LSG S+ V G ++ L +E +AY + + + Sbjct: 136 ELSGKSVGVTRGAVEDMVLTSVVPK---DAQVKRYEDNNTTLSAYLSGQVQYVATGNLVV 192 Query: 202 YALKLTNDR--PSEHVILPD 219 A+ N P +L D Sbjct: 193 AAIARQNADKAPVAQFMLKD 212 >gi|294083904|ref|YP_003550661.1| putative amino acid ABC transporter [Candidatus Puniceispirillum marinum IMCC1322] gi|292663476|gb|ADE38577.1| putative amino acid ABC transporter [Candidatus Puniceispirillum marinum IMCC1322] Length = 277 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 82/242 (33%), Gaps = 11/242 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 ++++ L + TS A L DI+KRG LK G++T V +A GD GF+ Sbjct: 8 KARVIMALVALFGVVATSLPAIADDLIADIQKRGTLKVGMST-FVPWAMRDKQGDLIGFE 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L++ + + ++++P +L +K+ D++ T R +++ Sbjct: 67 IDVATKLAADMGVE---VEFVPTAWSGIIPSLIAKKFDVIIGGMSITPQRNLTVNFTTPY 123 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 S++ + + +I + G T F F+ Sbjct: 124 AHSGQMMAANKKLSSSFSTIDDYNQSSVTIACRRGATPCKAAQKLFPK----STLRQFDD 179 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A + +++ A+ +GD++ Sbjct: 180 DAQAFQEVVNGNAHAMISSAPKPRFWSEAYPDEVFVAFDGENLTRGNEGFALRKGDSDAL 239 Query: 239 NI 240 N Sbjct: 240 NF 241 >gi|323529552|ref|YP_004231704.1| cationic amino acid ABC transporter periplasmic-binding protein [Burkholderia sp. CCGE1001] gi|323386554|gb|ADX58644.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. CCGE1001] Length = 260 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 80/225 (35%), Gaps = 13/225 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K ++ G++ F ++G GFD+D + + + +K ++ + Sbjct: 23 KDWSTIRFGVDASYPPFESKGSDGKLVGFDIDLGNEICARL---KAKCVWVENDFDGMIP 79 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASIC 149 AL++K+ D + + T R + F + + K GI + L G S+ Sbjct: 80 ALKAKKFDGVLSSMSMTPQRAEQIA--FSSKLFNTPTRLVAKKGSGILPTADSLKGKSVG 137 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ GT E Y++ + ++ +++ A + R DA D L Sbjct: 138 VEQGTIQETYAKTYWEPKG--TKVVPYQNQDQVYADLLSGRLDAALQDAVQADIGFLKTP 195 Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMV 249 R + + + + + + DT+ V ++ Sbjct: 196 RGAGFQFVGKDLDDPKILGNGAGIGMRKEDTDLKAKVDKAIADII 240 >gi|261212508|ref|ZP_05926793.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio sp. RC341] gi|260838439|gb|EEX65095.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio sp. RC341] Length = 243 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 83/260 (31%), Gaps = 31/260 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L+ + +K + F + N +GFD Sbjct: 1 MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + AL+ K+ D D T R + F Sbjct: 48 VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ ++ + L G + VQ G+T + L + + + + Sbjct: 103 PYYDNSAAFVSLTG-KVADQAALKGKRVGVQNGSTHQSFLLEQLP----DVVAVPYSSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + + R D+ GD + + + + + ++ + A+ + + Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQ 214 Query: 236 EWYNIVSWTHYAMVTAEELG 255 + ++ A+ E Sbjct: 215 ALVDQLNAALEAVKENGEYA 234 >gi|166366656|ref|YP_001658929.1| extracellular solute-binding protein [Microcystis aeruginosa NIES-843] gi|166089029|dbj|BAG03737.1| extracellular solute-binding protein [Microcystis aeruginosa NIES-843] Length = 263 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 45/236 (19%), Positives = 77/236 (32%), Gaps = 14/236 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAI---FD 73 T S +L I + G LK F+ + G W G+ V+ R + + Sbjct: 6 TIPSNEEPVLQRIARTGELKAAARKDATPFSYIDEKTGQWTGYGVELMRLVQRRLAQELG 65 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 P I + RF ++ Q+D+ T R + F + G F+ + Sbjct: 66 KPITITFTEATTNNRFQQVEQGQVDLSCNAATITEER--LEKVNFSIPYFMTGAQFLTKR 123 Query: 134 K--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 + I L+ +I TTT+ + + N + E A + Sbjct: 124 ENVDKIDINHTLAAVAIAYIPHTTTDSIIRYIYPLANWQ----AVSDRSEAVAKLQRGEV 179 Query: 192 DAYTGDISALYALKLTN-DRPSEHVILP-DIISKSPLAPAIIQGDTEWYNIVSWTH 245 +A D L + P + V+LP I+ + + D EW V Sbjct: 180 NAVVSDGILLLGELVKQGQDPRQFVLLPSQPITTELYGCILPKNDPEWKKFVDTVV 235 >gi|330966763|gb|EGH67023.1| arginine/ornithine ABC transporter periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 258 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 79/245 (32%), Gaps = 23/245 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L +L +F+ LK GI FA +G GFD Sbjct: 1 MKKLMLIGALALSVLAQPTFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + ++ ++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCEEM---KARCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M + S+++L G I VQ G+ E + + Sbjct: 106 KYYNSPARLVMKDGVTVSDSLAELKGKKIGVQRGSIHERFAREVLAPKG--VEVTPYGSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 EI A R D D + L L D + + A+ +GD Sbjct: 164 NEIYLDIGAGRLDGTIADATLLQDGFLKTDSGKGFAFVGPAFTDPNYFGDGIGIAVRKGD 223 Query: 235 TEWYN 239 + Sbjct: 224 KANLD 228 >gi|330879705|gb|EGH13854.1| arginine/ornithine ABC transporter periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 258 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 79/245 (32%), Gaps = 23/245 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L +L +F+ LK GI FA +G GFD Sbjct: 1 MKKLMLIGALALSVLAQPTFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + +K ++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCEEM---KAKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M + S+++L G I VQ G+ E + + Sbjct: 106 KYYNSPARLVMKDGVTVSDSLAELKGKKIGVQRGSIHERFAREVLAPKG--VEVTPYGSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 EI A R D D + L L D + + A+ +GD Sbjct: 164 NEIYLDIGAGRLDGTIADATLLQDGFLKTDSGKGFAFVGPAFTDPNYFGDGIGIAVRKGD 223 Query: 235 TEWYN 239 + Sbjct: 224 KANLD 228 >gi|289677303|ref|ZP_06498193.1| arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. syringae FF5] Length = 258 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 78/241 (32%), Gaps = 25/241 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L +L F+ LK GI FA +G GFD Sbjct: 1 MKKLMLIGAMALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + K ++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M I S+++L G I VQ G+ E + + Sbjct: 106 KYYNSPARLVMKDGTTISDSLAELKGKKIGVQRGSIHERFAREVLAPKG--VEVTPYGSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233 EI A R D D + L L D + + P + A+ +G Sbjct: 164 NEIYLDIGAGRLDGTVADATLLQDGFLKTDAGKGYAFVG-PSFVDPKYFGDGIGIAVRKG 222 Query: 234 D 234 D Sbjct: 223 D 223 >gi|260769235|ref|ZP_05878168.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio furnissii CIP 102972] gi|260614573|gb|EEX39759.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio furnissii CIP 102972] gi|315181775|gb|ADT88688.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio furnissii NCTC 11218] Length = 243 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 40/255 (15%), Positives = 82/255 (32%), Gaps = 31/255 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L+ ++ +K + F V N +GFD Sbjct: 1 MKKILLASLIGLVSASASAQQ-------------EIKFVMEATYAPFEFVDENNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + AL+ K+ D D T R + F Sbjct: 48 VDLANALCQQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSH 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ ++ + L G + VQ G+T + L + + + + Sbjct: 103 PYYDNSAAFVSLSG-KVADQAALKGKRVGVQNGSTHQSYLLEQLP----DVVAVPYSSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + + R D+ GD + + S + + ++ + A+ + + Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDSNLTYVGEHVTNAQYFGNGFGIAVNKDNQ 214 Query: 236 EWYNIVSWTHYAMVT 250 ++ A+ Sbjct: 215 ALLEQLNNALSAVKE 229 >gi|227329259|ref|ZP_03833283.1| arginine-binding periplasmic protein 1 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 243 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 80/248 (32%), Gaps = 25/248 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K I+ + + + A ++ F V AN +GFD Sbjct: 1 MKK----LIVAALFAVGAASANAADT---------IRFATEASYPPFEFVDANNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + L+ ++ + + D T R ++F Sbjct: 48 IDLANALCKEM---QATCTFSNQAFDSLIPGLKFRRFEAVIAGMDITPER--QQQVSFTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K ++ ++ L+G + VQ GTT + L + + ++ + Sbjct: 103 PYYDNSAQFIAQKG-KVADIAALTGKRVGVQNGTTHQKYL----MEKHSDIKTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + ND S + L A+ Q + E Sbjct: 158 NAVLDLKNGRLDAVFGDTAVVNEWLKQNDTLSTVGQKVTDKGYFGIGLGIAVRQNNDELL 217 Query: 239 NIVSWTHY 246 Sbjct: 218 KKFDTALN 225 >gi|262403805|ref|ZP_06080363.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio sp. RC586] gi|262350309|gb|EEY99444.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio sp. RC586] Length = 243 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 81/260 (31%), Gaps = 31/260 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L+ + +K + F + N +GFD Sbjct: 1 MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + AL+ K+ D D T R + F Sbjct: 48 VDLANALCKQL---EATCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ ++ + L G + VQ G+T + L + + + + Sbjct: 103 PYYDNSAAFVSLAG-KVADQAALKGKRVGVQNGSTHQSFLLEQLP----DVVAVPYSSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + + R D+ GD + + + + ++ + A+ + + Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEWFKGEGN---LAYVGERVTNAQYFGNGFGIAVNKDNQ 214 Query: 236 EWYNIVSWTHYAMVTAEELG 255 + ++ A+ E Sbjct: 215 ALLDQLNAALEAVKENGEYA 234 >gi|145295856|ref|YP_001138677.1| hypothetical protein cgR_1781 [Corynebacterium glutamicum R] gi|140845776|dbj|BAF54775.1| hypothetical protein [Corynebacterium glutamicum R] Length = 295 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 19/252 (7%) Query: 6 FVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + L + T+ ++ L I + G + G G + G DVD Sbjct: 13 ILGATALAGVTLTACGDSSGGDGFLAAI-ENGSVNVGTKYDQPGLGLRNPDNSMSGLDVD 71 Query: 63 FCRA----LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 ++ D I++ + +R +Q+ ++DI++ R S + F Sbjct: 72 VAEYVVNSIADDKGWDHPTIEWRESPSAQRETLIQNGEVDIIAATYSINAGR--SESVNF 129 Query: 119 RPITYFDGQGFIMHK-KKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 Q ++ + I ++ L +G +C +G+T + D + Sbjct: 130 GGPYLLTHQALLVRQDDDRIETLEDLDNGLILCSVSGSTPAQKVKDVLP----GVQLQEY 185 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP---SEHVILPDIISKSPLAPAIIQG 233 + A DA T D + L+ + E + + + + Sbjct: 186 DTYSSCVEALSQGNVDALTTDATILFGYSQQYEGDFRVVEMEKDGEPFTDEYYGIGLKKD 245 Query: 234 DTEWYNIVSWTH 245 D E + ++ Sbjct: 246 DQEGTDAINAAL 257 >gi|82777720|ref|YP_404069.1| histidine-binding periplasmic protein of high-affinity histidine transport system [Shigella dysenteriae Sd197] gi|309784981|ref|ZP_07679614.1| histidine-binding periplasmic protein [Shigella dysenteriae 1617] gi|81241868|gb|ABB62578.1| histidine-binding periplasmic protein of high-affinity histidine transport system [Shigella dysenteriae Sd197] gi|308927351|gb|EFP72825.1| histidine-binding periplasmic protein [Shigella dysenteriae 1617] Length = 260 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 89/244 (36%), Gaps = 20/244 (8%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ G + F + G+ GFD+D + L I ++ ++ +L++K Sbjct: 28 IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKAK 84 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154 +ID + + T R +AF Y ++ K I +V L G + V GT Sbjct: 85 KIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGT 142 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T E +Y+ + + ++ + I + A R DA D A L ++ Sbjct: 143 TQETFGNEYWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDY 200 Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + L + + D E ++ +A + A+ +++K Sbjct: 201 KFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKYF 253 Query: 270 NPDV 273 + DV Sbjct: 254 DFDV 257 >gi|312958427|ref|ZP_07772947.1| ABC lysine/arginine/ornithine transporter [Pseudomonas fluorescens WH6] gi|311286970|gb|EFQ65531.1| ABC lysine/arginine/ornithine transporter [Pseudomonas fluorescens WH6] Length = 250 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 45/236 (19%), Positives = 77/236 (32%), Gaps = 22/236 (9%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 YK F ++ + T+ + LK GI F A+G+ GFD Sbjct: 4 YKKFLLAAAVSMAFSATAMAE------------TLKMGIEAAYPPFNNKDASGNVVGFDK 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D AL + + + ++ + AL +K+ D L + T R+ + F Sbjct: 52 DIGDALCAKMKVEKCEV--YVSDWDGIIPALNAKKFDFLVSSLSITEERK--QAVDFTDP 107 Query: 122 TYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + FI K + + L G I Q T L D +++ Sbjct: 108 YYSNKLQFIAPKATADFKTDAAYLKGKVIGAQRATLAGSYLEDKLP----DTEAKLYDTQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E + R D D Y + D + ++ + A+ +GD Sbjct: 164 ENAYLDLTSGRLDGILADKYVQYEWLKSKDGSAYEFKGDPVVESDKIGIAVRKGDP 219 >gi|218514470|ref|ZP_03511310.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli 8C-3] Length = 217 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 72/224 (32%), Gaps = 13/224 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFD 60 K ++ + I + A L IK RG L G+ F + + KG++ Sbjct: 4 KILPKALFAMSISLLAATQAFADATLDRIKARGALTVGVILSGAPFGYIDPTSQTQKGYN 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL+ + + + R LQ ++DIL N +T R L P Sbjct: 64 LDIAKALADDLGVKLETVT---VTPPNRVQFLQQGKVDILIANMQYTEDRAKVLDWVPTP 120 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G + K G+ + L G +CV G+ L + + A Sbjct: 121 -YDRSGGAAVGRKDSGLKDWADLKGKPVCVSQGSNYTQPLIEQYGA-----EVKGLPSQP 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 E A + C L DRP + + Sbjct: 175 ESLLALQGGNC--VVAVHVGATLGLLLQDRPEDWKDYAILFPTE 216 >gi|159185708|ref|NP_357248.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|159140842|gb|AAK90033.2| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 279 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 65/196 (33%), Gaps = 12/196 (6%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVD 62 + + + + + L IK RG L G+ F + + KG ++D Sbjct: 11 KLIAGTVVIASMATAAHADA--TLDRIKGRGKLTVGVILSGAPFGFIDPKTQEQKGLNID 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +AL++ + D + R LQ ++DIL N +T R +L P Sbjct: 69 VAKALAAGLGVDLVT---ETVTPPNRVQFLQQGKVDILIANMQYTEERAKTLDYVPTP-Y 124 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G I K GI S L G CV G+ L + + A E Sbjct: 125 DRQGGAAIGRKDSGIKDWSDLKGKIACVSQGSNYTQPLIEQYGA-----QVKALPSQPES 179 Query: 183 DAAYRAHRCDAYTGDI 198 A + CD Sbjct: 180 LLALKGGNCDVSVHVN 195 >gi|307244700|ref|ZP_07526803.1| bacterial extracellular solute-binding protein, family 3 [Peptostreptococcus stomatis DSM 17678] gi|306491951|gb|EFM64001.1| bacterial extracellular solute-binding protein, family 3 [Peptostreptococcus stomatis DSM 17678] Length = 276 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 91/249 (36%), Gaps = 16/249 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAE-VKANGD--WKGFDVDFCRALSSAIFDDPSKIQYL 81 L IK G L G G F V +G G D+D + ++ I ++ Sbjct: 36 DDLAKIKANGKLVVGTAPGYPPFEFVVDKSGKSQVVGADIDLAKKIADEIGVK---LEIK 92 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISS 139 ++ +ALQS ++D++ + T R+ + F + + I++ K IS Sbjct: 93 AMDFDALIMALQSSKVDMVITSMTPTEERKK--SVDFSDVYFEGTNSIIVNINFSKDISK 150 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L + VQ G+ E+ + KA + ++ A + D Sbjct: 151 EDDLKNIVLGVQRGSVQEIYAKEVLKA----PKIKSLTAIPDLIADMKNGNIDGIIASTV 206 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE-WYNIVSWTHYAMVTAEEL-GIT 257 + + +K A AI +G+ + +IV+ T ++ + + I Sbjct: 207 VAKINANQYEGIKLIDVNLSQANKEEAAIAIKKGENKALLDIVNKTIKSLKDSGQYEEIL 266 Query: 258 QKNINQVSK 266 KNI+ SK Sbjct: 267 NKNIDLASK 275 >gi|302337866|ref|YP_003803072.1| extracellular solute-binding protein family 3 [Spirochaeta smaragdinae DSM 11293] gi|301635051|gb|ADK80478.1| extracellular solute-binding protein family 3 [Spirochaeta smaragdinae DSM 11293] Length = 282 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 82/256 (32%), Gaps = 28/256 (10%) Query: 2 YKDFFVSILCLIILFFTSFSTNA------------SILGDIKKRGFLKCGINTGLVGFAE 49 K + L +I+ +N L I K G L + Sbjct: 8 KKSIILLALVMILSLLVGACSNGGQSAANATKVQEDALQKILKSGKLVIATDLTGPPVQY 67 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 A G G V+ + + + I++ + + +L + ++D+++ N +L Sbjct: 68 KDAEGKPAGLIVELMELAAKELGVE---IEWQDMAWESLIPSLTAGKVDMIAANMSMSLS 124 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAH 167 R + F F G ++ K GI +L G + G++ L + Sbjct: 125 RAK--AIRFSDPYMFTGVYAMVRKDSGIRDWEELLEPGKILAATMGSSHATYLKE----- 177 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 N Y P +E + + R D D L N E + + + Sbjct: 178 NYNYEPKQYESSTDFINELKNGRIDGVMDDELLLLEFCKQNP---EFTLTANPVRPDVYG 234 Query: 228 PAIIQGDTEWYNIVSW 243 A QG+ + +V W Sbjct: 235 LAFTQGN-QNDTLVDW 249 >gi|254254679|ref|ZP_04947996.1| Lysine-arginine-ornithine-binding periplasmic protein [Burkholderia dolosa AUO158] gi|124899324|gb|EAY71167.1| Lysine-arginine-ornithine-binding periplasmic protein [Burkholderia dolosa AUO158] Length = 260 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 84/243 (34%), Gaps = 21/243 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ + + +L ++ + A K ++ G++ F +G GFD Sbjct: 1 MKK--ILAAVTVALLAVSAGTAYA------KDWTTVRFGVDASYPPFESKGPDGKVVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + +K ++ + AL++++ D + + T R+ + F Sbjct: 53 VDLGNEICRRM---NAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPARQEQIA--FSS 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K G+ + L G SI V+ GT E Y+ + ++ Sbjct: 108 KLFNTPTRLVTKKGAGLQPTAESLKGKSIGVEQGTIQETYAKTYWAPKG--VKVVPYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +++ A A R D D L R + + + + D Sbjct: 166 DQVYADLIAGRLDGALQDAVQAEIGFLKTPRGAGFDFAGKDLDDPKTLGEGAGIGLRKED 225 Query: 235 TEW 237 T+ Sbjct: 226 TDL 228 >gi|34496307|ref|NP_900522.1| lysine/arginine/ornithine ABC transporter [Chromobacterium violaceum ATCC 12472] gi|34102160|gb|AAQ58527.1| subunit of the lysine/arginine/ornithine transporter (ABC superfamily) [Chromobacterium violaceum ATCC 12472] Length = 259 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 37/255 (14%), Positives = 78/255 (30%), Gaps = 22/255 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L+ +++ K ++ G++ F NG GFD Sbjct: 1 MKKALAALAVGLMAASLGAYA---------KDWKEIRFGVDASYAPFEYKAPNGQVVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + +K ++ + AL++K+ D + + T R +AF Sbjct: 52 IDLGNEICKRM---KAKCVWVENDFDGMIPALKAKKFDGVLSSMSMTEAR--MKEIAFSA 106 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + G+ + + L G + V+ GT E ++ + ++ Sbjct: 107 KLFNTPTRMVAKAGSGLMPTPASLKGKRVGVEQGTIQEAYAKKHWAPAG--VEVVPYQNQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-----LPDIISKSPLAPAIIQGD 234 + A A R DA D L + + + D Sbjct: 165 TLVLADLTAGRLDASLQDAVQADIGFLKKPEGKGFAFAGKDLVDPQTLGEGAGIGLRKED 224 Query: 235 TEWYNIVSWTHYAMV 249 + + M+ Sbjct: 225 KDLKAGIDKAIADML 239 >gi|330811540|ref|YP_004356002.1| Putative amino acid transporter, binding component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379648|gb|AEA70998.1| Putative amino acid transporter, binding component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 258 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 78/227 (34%), Gaps = 12/227 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 L+ GI FA + G +GFD D AL + + K +++ AL+ Sbjct: 25 KTLRIGIEAAYPPFASKTSEGKIEGFDYDIGNALCAQM---QVKCEWIEGEFDGLIPALK 81 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQA 152 K+ID+ + T R+ + F YF +M + + L G ++ VQ Sbjct: 82 VKKIDLALSSMTITEERKK--SVDFTHKYYFTSSRLVMKEGAVVDDQYASLKGKTVGVQR 139 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TTT+ + + + EEI + R DA D L Sbjct: 140 ATTTDRYATEVLEPKG--VIVKRYSNNEEIYMDLASGRLDAIFADTIPLEDFLSMPRGKG 197 Query: 213 EHVILPDI----ISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + P++ A+ +G+T+ ++ + E Sbjct: 198 YAFVGPELKDPKYVGEGAGIAVRKGNTQLVADLNKAIDGIRANGEYQ 244 >gi|260769495|ref|ZP_05878428.1| putative amino acid uptake ABC transporter periplasmic solute-binding protein precursor [Vibrio furnissii CIP 102972] gi|260614833|gb|EEX40019.1| putative amino acid uptake ABC transporter periplasmic solute-binding protein precursor [Vibrio furnissii CIP 102972] Length = 259 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 79/217 (36%), Gaps = 15/217 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 +K G F A+G GFD++ +AL S + + +++ + AL + Sbjct: 27 TIKIGTEGAYPPFNYYTADGQLAGFDIEIGKALCSEMKVE---CEFVAQDWDGIIPALLA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152 + D++ + T R+ ++F F++ K GI S + G I Q+ Sbjct: 84 GKYDMILASMFITEARK--QQVSFSAPYQASAMTFVVDKNSGIKDVSPKAMKGLIIGAQS 141 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT L A+ + ++ + ++ + R DA GDI + ++D Sbjct: 142 STTQAEYLL----ANYPESDVRLYPTQDAVNLDLASGRIDAQAGDIMPMTDWLSSDDGAC 197 Query: 213 EHVILPDIISKSP----LAPAIIQGDTEWYNIVSWTH 245 H I + A+ + D V+ Sbjct: 198 CHKAGDLITDSKYVGDGVGIALRKEDDALRQRVNQAL 234 >gi|254261687|ref|ZP_04952741.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710a] gi|254220376|gb|EET09760.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1710a] Length = 326 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 72/230 (31%), Gaps = 14/230 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 +L +K+ G LK + F +G +GFDVD + +++ + P Q++ Sbjct: 88 DLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDVDVAKEVAARLGVKP---QFVTTE 144 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQ 142 LQ+ + D++ T R L F + I + Sbjct: 145 WSGILAGLQAGKFDVIVNQVGITPAR--RQALDFSQPYVYSAAQLIQRADDKHDYGAPGA 202 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G I V GT AD K + E A R D D L Sbjct: 203 LQGKRIGVTLGT----NFADLAKTLQ-GVDVKTYPGAPEKLRDVAAGRIDVSMDDRLMLP 257 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 L P ++ + +G+ ++ + A + A+ Sbjct: 258 YLIKNAHMPLR-PGATINGGETQMGIPFRKGNPKFAKALDDAL-ASMRAD 305 >gi|24113682|ref|NP_708192.1| lysine-, arginine-, ornithine-binding periplasmic protein [Shigella flexneri 2a str. 301] gi|30063736|ref|NP_837907.1| lysine-, arginine-, ornithine-binding periplasmic protein [Shigella flexneri 2a str. 2457T] gi|24052750|gb|AAN43899.1| lysine-, arginine-, ornithine-binding periplasmic protein [Shigella flexneri 2a str. 301] gi|30041991|gb|AAP17717.1| lysine-, arginine-, ornithine-binding periplasmic protein [Shigella flexneri 2a str. 2457T] gi|281601751|gb|ADA74735.1| Lysine-, arginine-, ornithine-binding periplasmic protein [Shigella flexneri 2002017] gi|313651134|gb|EFS15533.1| lysine-arginine-ornithine-binding periplasmic protein [Shigella flexneri 2a str. 2457T] Length = 260 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 95/279 (34%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ ++ +++ + L + ++ G +T F+ A GD+ GFD Sbjct: 1 MKKSILALSL---LVGLSAAASSYAALPE-----TVRIGTDTTYALFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKR--QQEIAFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I L G + V G+T E + +++ + + + Sbjct: 108 KLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVD--VVAYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + A R DA D A L + + + + Sbjct: 166 DLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDY 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E + EL ++++K + +V Sbjct: 226 AELTAAFNKAL------GELRQDGT-YDKMAKKYFDFNV 257 >gi|270292808|ref|ZP_06199019.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus sp. M143] gi|270278787|gb|EFA24633.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus sp. M143] Length = 482 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 78/254 (30%), Gaps = 22/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L L +F + +K ++ F +N ++ G D Sbjct: 1 MKKKILACLLILFPIFSLGIAKA----DTVKS--KYIIASDSSFAPFVFQNSNNEYTGID 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + I+ A+Q+ Q D + T R+ + F Sbjct: 55 MDLIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT--FDFSD 109 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + + I+S L ++ V+ GT ++ L + + K F Sbjct: 110 SYYTANTILGVKESSTIASYEDLKDKTVGVKNGTASQTFLTENQSKYGYK--IKTFSDGS 167 Query: 181 EIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + DA D + P + + A A+ +G Sbjct: 168 SMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPIAGTPIGET------AFAVKKGTNPE 221 Query: 238 YNIVSWTHYAMVTA 251 + A + A Sbjct: 222 LIQMFNKGLANLKA 235 >gi|220909289|ref|YP_002484600.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC 7425] gi|219865900|gb|ACL46239.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7425] Length = 282 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 83/237 (35%), Gaps = 10/237 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 S A R L G T F + G+ GFD++ ++ + Q Sbjct: 46 SAQAQTPNSQPPRTTLVMGTATDYPPFQYRIGSEGEIVGFDIELANYIAKKLG---LTYQ 102 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++ + AL +++D T R + F + + I + I Sbjct: 103 IQDIDFNQLIPALAGRKLDFALAAITPTPER--RQIVDFSLVYFQSRDTIISRSDREIKQ 160 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L+G S+ VQ GT E + + + F RV E+ A R + DA + Sbjct: 161 FRDLAGRSVGVQLGTIQERQIEE-LTQQMPNLKIVRFRRVGEMVQALRIGQVDAAIVE-- 217 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 A+ A T +RP + + A A +G + + M+++ E+ + Sbjct: 218 AIVAETYTENRPELKMYPITEKPATEFAIAFPKGSVLVKDF-NRILQEMISSGEMEL 273 >gi|15601514|ref|NP_233145.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio cholerae O1 biovar eltor str. N16961] gi|121590867|ref|ZP_01678191.1| arginine-binding periplasmic protein 1 [Vibrio cholerae 2740-80] gi|121728653|ref|ZP_01681671.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio cholerae V52] gi|147671951|ref|YP_001215537.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio cholerae O395] gi|153215610|ref|ZP_01950055.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio cholerae 1587] gi|153818668|ref|ZP_01971335.1| arginine-binding periplasmic protein 1 [Vibrio cholerae NCTC 8457] gi|153824407|ref|ZP_01977074.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio cholerae MZO-2] gi|153829857|ref|ZP_01982524.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio cholerae 623-39] gi|254285780|ref|ZP_04960743.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio cholerae AM-19226] gi|255746480|ref|ZP_05420427.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholera CIRS 101] gi|262152375|ref|ZP_06028508.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholerae INDRE 91/1] gi|262168601|ref|ZP_06036297.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholerae RC27] gi|262189842|ref|ZP_06048175.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholerae CT 5369-93] gi|9658181|gb|AAF96657.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547274|gb|EAX57395.1| arginine-binding periplasmic protein 1 [Vibrio cholerae 2740-80] gi|121629064|gb|EAX61510.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio cholerae V52] gi|124114698|gb|EAY33518.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio cholerae 1587] gi|126510821|gb|EAZ73415.1| arginine-binding periplasmic protein 1 [Vibrio cholerae NCTC 8457] gi|146314334|gb|ABQ18874.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio cholerae O395] gi|148874658|gb|EDL72793.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio cholerae 623-39] gi|149741961|gb|EDM55990.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio cholerae MZO-2] gi|150424277|gb|EDN16215.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio cholerae AM-19226] gi|227015180|gb|ACP11389.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio cholerae O395] gi|255736234|gb|EET91632.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholera CIRS 101] gi|262023130|gb|EEY41835.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholerae RC27] gi|262030826|gb|EEY49457.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholerae INDRE 91/1] gi|262034273|gb|EEY52680.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholerae CT 5369-93] Length = 243 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 83/260 (31%), Gaps = 31/260 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L+ + +K + F + N +GFD Sbjct: 1 MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + AL+ K+ D D T R + F Sbjct: 48 VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ ++ + L G + VQ G+T + L + + + + Sbjct: 103 PYYDNSAAFVSLAG-KVADQAALKGKRVGVQNGSTHQSFLLEQL----SDVVAVPYSSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + + R D+ GD + + + + + ++ + A+ + + Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQ 214 Query: 236 EWYNIVSWTHYAMVTAEELG 255 + ++ A+ E Sbjct: 215 ALLDQLNAALEAVKENGEYA 234 >gi|322806287|emb|CBZ03855.1| amino acid ABC transporter, amino acid-binding/permease protein [Clostridium botulinum H04402 065] Length = 272 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 73/226 (32%), Gaps = 25/226 (11%) Query: 1 MYKDFFVSILCLIILFF-----------TSFSTNASILGDIKKRGFLKCGINTGLVGFAE 49 M K + +II T+ + S + IK+ G L G + Sbjct: 1 MSKKILGKLGAIIISLTMVISLVACGKNTAGNEEKSKVDKIKESGKLVVGTCADYPPYEF 60 Query: 50 ---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + + GFD+ + ++ + ++ + ALQS +DI+ + Sbjct: 61 HKTINGKDEIVGFDITIAKEIAKDLGVK---LEIKDMKFDGLLAALQSGNVDIVIAGMNP 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYF 164 T R+ + F I Y Q ++ + S+ + G I VQ GTT E + Sbjct: 118 TEDRKK--SVDFSKIYYQAIQSVVVGAEDKDKFKSLEEFKGKKIGVQKGTTQE----EVA 171 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 K +V ++ + + D + + Sbjct: 172 KKEMTNSEIKSLGKVTDLVLELQNKKVDGLVLENPVAVSYAKNGKN 217 >gi|253688088|ref|YP_003017278.1| cationic amino acid ABC transporter, periplasmic binding protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754666|gb|ACT12742.1| cationic amino acid ABC transporter, periplasmic binding protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 243 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 80/248 (32%), Gaps = 25/248 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K I+ + + + A ++ F V AN +GFD Sbjct: 1 MKK----LIVAALFAVGAASANAADT---------IRFATEASYPPFEFVDANNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + L+ ++ + + D T R ++F Sbjct: 48 IDLANALCKEM---QANCTFSNQAFDSLIPGLKFRRFEAVIAGMDITPER--QQQVSFTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K ++ V+ L+G + VQ GTT + L + + ++ + Sbjct: 103 PYYDNSAQFIAQKG-KVADVAALTGKRVGVQNGTTHQKYL----MEKHSDIKTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + ND S + L A+ Q + E Sbjct: 158 NAVLDLKNGRLDAVFGDTAVVNEWLKQNDTLSTVGQKVTDKGYFGIGLGIAVRQNNDELL 217 Query: 239 NIVSWTHY 246 Sbjct: 218 KKFDDALN 225 >gi|78355215|ref|YP_386664.1| extracellular solute-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217620|gb|ABB36969.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 247 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 35/236 (14%), Positives = 75/236 (31%), Gaps = 23/236 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + +++L +++ L +T F G++ GFD Sbjct: 1 MKRVILAAFALVMLLSANAWAQ------------KLVVAHDTNFKPFEFKDETGNYTGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ +A++S I + + P + LQS D R+ + F Sbjct: 49 IELWKAIASEIGVEY---TFQPNDFNGIIPGLQSATFDAGIAGITIKPERQEV--VDFSD 103 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I + L I + T++ AD+ K + ++ Sbjct: 104 PYYDSGLVILVRADNNDIKGIEDLKDKVISTKLATSS----ADFAAGFAPKDNIKLYPNN 159 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + DA D+ + + V+ P + A +G Sbjct: 160 DAMFLELLSGGADAVIFDMPVVKDFAQKAGKGQVKVVGP-LYQGQSYGIAFPKGSD 214 >gi|323528249|ref|YP_004230401.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323385251|gb|ADX57341.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 265 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 80/220 (36%), Gaps = 13/220 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ GI F A G +GFDVD A+ + + K +++ ALQ+ Sbjct: 32 TLRFGIEAAYPPFESKSATGQLQGFDVDVGNAVCAKM---AVKCEWVENAFDGLIPALQA 88 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153 ++ D+++ + T R+ + F P Y + + G+ V L G + V G Sbjct: 89 RKFDVINSAMNITAKRK--QTIDFTPPIYVVPIVMVAKRGSGLMPDVKSLQGKRVGVLQG 146 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 ++ E L ++ + + + +++ A R DA + + L + Sbjct: 147 SSQEDFLKAHWANAGVS--VVSYADQDQVYTDLVAGRLDAAVQEAQTVEDGFLKKPAGHD 204 Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248 + I +S + +GD V A+ Sbjct: 205 YAIAGQPLSDPATLGEGTGFGMRKGDKALAKKVDAALDAL 244 >gi|167561990|ref|ZP_02354906.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia oklahomensis EO147] Length = 258 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 77/222 (34%), Gaps = 15/222 (6%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G++ F +G+ GFDVD + + I K + P + AL+ Sbjct: 23 KTVRIGVDASYPPFESTAPSGEIVGFDVDLAKEVCKRI---NVKCVWTPQDLDGIIPALK 79 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQA 152 +K+ D++ + T R + F Y I + +V L G + V+ Sbjct: 80 AKKFDVIVSSLTVTAKR--REQIDFSDKLYDAPARMIAKAGSPLAPTVESLKGKHVGVEQ 137 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T E +++ + ++ +++ A + R DA D L R Sbjct: 138 GSTQETFAKAHWEPKG--VTVVSYQNQDQVYADLGSGRLDATLQDELQADYGFLRTPRGK 195 Query: 213 EHVILPDIISKSPL------APAIIQGDTEWYNIVSWTHYAM 248 K P A + + D + + + AM Sbjct: 196 GFAWAG-PAVKDPKTLGDGTAMGLRKEDADLKDAIDRALAAM 236 >gi|152989615|ref|YP_001346625.1| amino acid binding protein [Pseudomonas aeruginosa PA7] gi|150964773|gb|ABR86798.1| probable amino acid binding protein [Pseudomonas aeruginosa PA7] Length = 263 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 48/226 (21%), Positives = 78/226 (34%), Gaps = 13/226 (5%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 + G L+ GI F+ G+ GFD D AL + + K Q++ Sbjct: 24 AVAADGNLRIGIEAAYPPFSFKTPEGELAGFDYDIGNALCAQM---QVKCQWIEQEYDGL 80 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147 +L+ ++ID + T R + F YF +M + + S SQL+G Sbjct: 81 IPSLKVRKIDAALSSITITEERRR--SVDFTRKYYFTPGRLVMKEGAQLDDSFSQLAGKR 138 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 I VQ G T + + + + +EI A R DA D L L Sbjct: 139 IGVQRGATADRFASAVLAKAG--AEVVRYTSQDEIYLDLVAGRLDATFADSIPLQTGFLD 196 Query: 208 NDRPSEHVIL-----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R + + A+ +GD E ++ A+ Sbjct: 197 TPRGKGYAFVGPEFKDPKHFGEGAGIAVRKGDAELLGKLNAAIDAI 242 >gi|330955420|gb|EGH55680.1| arginine/ornithine ABC transporter periplasmic arginine/ornithine-binding protein [Pseudomonas syringae Cit 7] Length = 243 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 79/246 (32%), Gaps = 25/246 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L +L F+ LK GI FA +G GFD Sbjct: 1 MKKLMLIGAMALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + K ++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M + S+++L G I VQ G+ E + + Sbjct: 106 KYYNSPARLVMKDGTTVSDSLAELKGKKIGVQRGSIHERFAREVLAPKG--VEVTPYGSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233 EI A R D D + L L D + + P + A+ +G Sbjct: 164 NEIYLDIGAGRLDGTVADATLLQDGFLKTDAGKGYAFVG-PSFVDPKYFGDGIGIAVRKG 222 Query: 234 DTEWYN 239 D + Sbjct: 223 DKANLD 228 >gi|330898594|gb|EGH30013.1| extracellular solute-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 260 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 41/276 (14%), Positives = 92/276 (33%), Gaps = 29/276 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + + K+ L+ G++ F A+G GFD Sbjct: 1 MKKAWLTLSALAL------CIAAGNTMA--KEYKELRFGVDPSYAPFESKAADGSLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +++ + L++++ D + + T RE + F Sbjct: 53 IDLGNAICKEL---KVTCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKV--IDFSN 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + + G + + L G ++ + GT E + + Sbjct: 108 ELFSGPTSLVFKRGAGFTADPASLKGKTVGYEQGTIQEAYAKAVLDKAGISTK--AYANQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +++ + + R DA D+ L + +++ + I D+E Sbjct: 166 DQVYSDLTSGRLDASIQDMLQAELGFLKSPAGADYEVSKPI-------------DSELLP 212 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 + A E + K I + KD T ++Q+ Sbjct: 213 AKTAIGIAQGNKELKALLDKGIEAMHKDGTYAEIQK 248 >gi|224477395|ref|YP_002635001.1| hypothetical protein Sca_1910 [Staphylococcus carnosus subsp. carnosus TM300] gi|222422002|emb|CAL28816.1| conserved hypothetical protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 262 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 36/259 (13%), Positives = 76/259 (29%), Gaps = 15/259 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGDWK 57 M + + ++ + + +S K + L G F G+ Sbjct: 1 MKRILLTVLTIVLTVALAACGNGSSDNKSSKSKDDNKTLVVGTEGTYAPFTYHDKKGNLT 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+D+D +A++ + +++ F L S + D+++ RE Sbjct: 61 GYDIDVTKAVAKEMGYK---VKFKETQWDSMFAGLDSGRFDMIANQVGINKDREAKYK-- 115 Query: 118 FRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + +++K I S + G + Q T+ LA A + Sbjct: 116 FSKPYTYSSGVLVVNKDNKNIKSFDDVKGKKLA-QTFTSNYGELAKSKGA-----ELVKV 169 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + ++HR + D + K I + + D Sbjct: 170 DGFNQAMDLLQSHRVEGTFNDSLSYLDYKKQKPDAKIKEIKGNAEKSKTAFTFTKKEDDA 229 Query: 237 WYNIVSWTHYAMVTAEELG 255 V+ + EL Sbjct: 230 TIKKVNKALDKLEKDGELA 248 >gi|254442759|ref|ZP_05056235.1| Bacterial extracellular solute-binding protein, family 3 [Verrucomicrobiae bacterium DG1235] gi|198257067|gb|EDY81375.1| Bacterial extracellular solute-binding protein, family 3 [Verrucomicrobiae bacterium DG1235] Length = 260 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 81/258 (31%), Gaps = 24/258 (9%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++ + ++ + L G+ F N +G VD Sbjct: 2 KSIRYLLIAITLVLTSCKPAPED--------NTLVVGMELSYPPFEMSDENNQPRGVSVD 53 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 AL ++ ++ + +L++ +ID++ + T R S + F Sbjct: 54 LAYALGESLG---RPVRIENIAFAGLISSLKTGKIDLILSSMTATEER--SQSIDFSDPY 108 Query: 123 YFDGQGFIMHKKKGISSV--SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 G ++ K I + + SI V+ GTT L D+ K + E+ Sbjct: 109 LETGLCLLVSKDSDIQDIANADQPDKSIAVKQGTTGHLYAIDHVK----HAQVLPLEKET 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + DA+ D + + P + A I +G+ E Sbjct: 165 AAVIEVTQGKADAFIYDQMS--TFRNWQRHPDTTRPILTPFKTEHWAIGIQKGNEELVQS 222 Query: 241 VSWTHYAMVTA---EELG 255 ++ A EELG Sbjct: 223 INAFLTEFKAAGGFEELG 240 >gi|315182023|gb|ADT88936.1| hypothetical amino acid uptake ABC transporter periplasmic solute-binding protein precursor [Vibrio furnissii NCTC 11218] Length = 259 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 78/217 (35%), Gaps = 15/217 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 +K G F A+G GFD++ +AL S + + +++ + AL + Sbjct: 27 TIKIGTEGAYPPFNYYTADGQLAGFDIEIGKALCSEMKVE---CEFVAQDWDGIIPALLA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152 + +++ + T R ++F F++ K GI S + G I Q+ Sbjct: 84 GKYNMILASMFITEAR--QQQVSFSAPYQASAMTFVVDKNSGIKDVSPKAMKGLIIGAQS 141 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT L A+ + ++ + ++ + R DA GDI + ++D Sbjct: 142 STTQAEYLL----ANYPESDVRLYPTQDAVNLDLASGRIDAQAGDIMPMTDWLSSDDGAC 197 Query: 213 EHVILPDIISKSP----LAPAIIQGDTEWYNIVSWTH 245 H I + A+ + D V+ Sbjct: 198 CHKAGDLITDSKYVGDGVGIALRKEDDALRQRVNQAL 234 >gi|153952126|ref|YP_001398328.1| cjaC protein [Campylobacter jejuni subsp. doylei 269.97] gi|152939572|gb|ABS44313.1| cjaC protein [Campylobacter jejuni subsp. doylei 269.97] Length = 251 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 76/237 (32%), Gaps = 16/237 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F V ++ L+ LF + N S + LK G F N GFD Sbjct: 1 MKKIFSVVLVALVGLFLNAC--NDSKNKESNASVELKVGTAPNYKPFNYK-ENSKLTGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR- 119 D ++ + KI ++ N AL++ +ID+++ + T R + F Sbjct: 58 TDLVEEIAKK---NGIKIVWIETNFDGLIPALKAGKIDMIASSMSATDER--RQSVDFTK 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 P + + + + L G I VQ GT L + + + Sbjct: 113 PYYISKNLYLKLKNNDSLQTKNDLEGKKIGVQLGT-----LQENTAKAIKNTQVQSNKDL 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 A + ++ DA D + P + + A + + Sbjct: 168 NIAVLALKNNKIDAIVADEDTAKGFLA--ENPELVSFYQETDGGEGFSFAFDKNKQK 222 >gi|82752009|ref|YP_417750.1| extracellular amino acid binding ABC transporter [Staphylococcus aureus RF122] gi|82657540|emb|CAI81983.1| extracellular amino acid binding ABC transporter [Staphylococcus aureus RF122] Length = 259 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 67/213 (31%), Gaps = 13/213 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + FV I + IL +++ K + G F+ +G G+D Sbjct: 1 MKRLLFVMIAFVFILAACGNNSSKDK-EANKDSKTINVGTEGTYAPFSFHDKDGKLTGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + K+++ + F L + + D+++ RE F Sbjct: 60 IDVIKAVAKE---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYK--FSK 114 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F ++ KK I + G + Q T+ LA A + Sbjct: 115 PYTFSSAVLVIRENKKDIKDFDDVKGKKVA-QTFTSNYGKLAKDKGA-----DITKVDGF 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 + + R D D + K Sbjct: 169 NQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAK 201 >gi|45358018|ref|NP_987575.1| amino-acid ABC transporter [Methanococcus maripaludis S2] gi|44920775|emb|CAF30011.1| Probable amino-acid ABC transporter [Methanococcus maripaludis S2] Length = 248 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 93/263 (35%), Gaps = 18/263 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ + LI+ S + + IK G L G+ A NG+ GF+ Sbjct: 1 MKKICFLMAIVLILAISACISLPSEQI-TIK-TGTLSVGVFKHAPP-AVYGQNGELIGFE 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ ++ + +++ A+ + +ID + + RE ++F Sbjct: 58 VELVSEIAKRM---NLNVEFKEYMFSNLLNAVANNEIDCAISDISISPEREKI--VSFTR 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ++ K+ GI +++ L+G I V T E K+ M + I +E Sbjct: 113 AYSHTELVVLVRKESGIRTITDLNGKKIGVVDDTIHETKAKSLQKS--MDFEIIEYETPI 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E+ + DA ++ + + L D + A+ + + E + Sbjct: 171 ELYNDLNNGKIDATISEMDNF-----KVSSYMDQLELIDTLEILYSGIAVNKNNKELLHE 225 Query: 241 VSWTHYAMVTA---EELGITQKN 260 + + T EEL N Sbjct: 226 MDRVLLELETEGYIEELKQKWSN 248 >gi|298695678|gb|ADI98900.1| extracellular amino acid binding ABC transporter [Staphylococcus aureus subsp. aureus ED133] Length = 259 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 67/213 (31%), Gaps = 13/213 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + FV I + IL +++ K + G F+ +G G+D Sbjct: 1 MKRLLFVMIAFVFILAACGNNSSKDK-EANKDSKTINVGTEGTYAPFSFHDKDGKLTGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + K+++ + F L + + D+++ RE F Sbjct: 60 IDVIKAVAKE---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYK--FSK 114 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F ++ +K I + G + Q T+ LA A + Sbjct: 115 PYTFSSAVLVIRENEKDIKDFDDVKGKKLA-QTFTSNYGKLAKDKGA-----DITKVDGF 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 + + R D D + K Sbjct: 169 NQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAK 201 >gi|257468246|ref|ZP_05632342.1| extracellular solute-binding protein, family 3 [Fusobacterium ulcerans ATCC 49185] gi|317062527|ref|ZP_07927012.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185] gi|313688203|gb|EFS25038.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185] Length = 244 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 90/247 (36%), Gaps = 23/247 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L + + + K+ L G N F + +G GFD Sbjct: 1 MKKLFCAVMLLFMGIVGSVSFA--------KENKVLYVGTNAEFQPFEYL-EDGKIVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ ++ + + I++ + ALQ+K++D++ T R+ + F Sbjct: 52 VELMEEIAKLLGKE---IEWKNIAFDGLLPALQAKKLDVIIAGMTATEERKKF--VNFSE 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y Q +++K+ + L+G ++ V G T ++ ++ + Sbjct: 107 TYYTSNQMILINKENPVVESFDKLAGHNVGVILGYTGDIAVSAI-----DGVKVQRYNGA 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E A +A + DA D S ++ E ++ +SK A A+ + + + Sbjct: 162 AEAIMALKAKKVDAVVLD-SEPAKNYAKQNK--ELGLINTDVSKEEYAIAVGKDNKALAD 218 Query: 240 IVSWTHY 246 + Sbjct: 219 NIDKALK 225 >gi|188534746|ref|YP_001908543.1| Putative amino acid ABC transporter, substrate binding protein [Erwinia tasmaniensis Et1/99] gi|188029788|emb|CAO97667.1| Putative amino acid ABC transporter, substrate binding protein [Erwinia tasmaniensis Et1/99] Length = 261 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 83/223 (37%), Gaps = 10/223 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +A L DI+KRG L+ + F V + +G+D+D L+ + K+Q +P Sbjct: 22 HADQLQDIEKRGVLRVAVPQDFPPFGSVGTDLQPQGYDIDMANYLARQM---KLKLQLVP 78 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + R LQ+ ++D++ + RE + F G ++ + + ++ Sbjct: 79 VTSANRVPYLQTDKVDLVISSLGKNPEREKV--IDFSRAYAPFFLGVFGPQQGTLKNAAE 136 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 LSG S+ V G ++ L +E +AY + + + Sbjct: 137 LSGKSVGVTRGAVEDMVLTSVAPK---DAQVKRYEDNNTTLSAYLSGQVQYIATGNLVVA 193 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A+ ++ + + SP + +G+ V Sbjct: 194 AMARQ--NAAKAPLSQFTLKDSPCFIGLKKGEPALKAKVDALI 234 >gi|170694514|ref|ZP_02885667.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170140648|gb|EDT08823.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 264 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 77/226 (34%), Gaps = 13/226 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + K+ ++ G++ F + +G GFDVD A+ + +K ++ + Sbjct: 22 TMASAKEWTTIRIGVDPTYPPFESIAKDGTVVGFDVDLGNAICEKL---KAKCVWVQSSF 78 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI-TYFDGQGFIMHKKKGISSVSQLS 144 LQ+++ D++ + R + F + + S+L+ Sbjct: 79 DGLIPGLQARKFDVILSSMAANAKR--REQIDFTDRLYRNQTRLIAKDSAHLLPEASKLA 136 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G + V+ GT E + + + + + ++ + A R DA D Sbjct: 137 GKRVAVEQGTVQETYAREKWASSG--VEVVAYPSYDQAYSDLTAGRVDAVLMDAVQGKLG 194 Query: 205 KLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245 L D++ + + A + + + + + ++ Sbjct: 195 FLATPAGKGFSFAGDVVYDAKIMGDGDAAGVRKSEPQLRDALNGAI 240 >gi|57505525|ref|ZP_00371452.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Campylobacter upsaliensis RM3195] gi|57016072|gb|EAL52859.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Campylobacter upsaliensis RM3195] Length = 252 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 36/237 (15%), Positives = 75/237 (31%), Gaps = 15/237 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++ + LF + S + D L+ G F + G D Sbjct: 1 MRK-IFAFLVAFLSLFVVACSDTSVTNNDSNASLSLRVGTAPNYKPFDYK-EDAKLTGLD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + ++ ++ ++ AL++ +ID+++ T + + F Sbjct: 59 IDLVNEIAKR---EGIELTWVEMSFDGLIPALKTGKIDMIASAMSATE--DRRKSVDFSD 113 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y +I K + +S L G I VQ GT L + E + Sbjct: 114 VYYTTKNLYIKKKDNEVLNSKEDLEGKIIGVQLGT-----LQEPAAKAIKDTKVQSNESL 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + DA D + + + A + + Sbjct: 169 SVVIMELKEGKIDAVVADKDVSTGYL--KENADLIGFFEEEDGSEGFSFAFDKDKQK 223 >gi|254849920|ref|ZP_05239270.1| arginine ABC transporter [Vibrio cholerae MO10] gi|254845625|gb|EET24039.1| arginine ABC transporter [Vibrio cholerae MO10] Length = 255 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 83/260 (31%), Gaps = 31/260 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L+ + +K + F + N +GFD Sbjct: 13 MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + AL+ K+ D D T R + F Sbjct: 60 VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ ++ + L G + VQ G+T + L + + + + Sbjct: 115 PYYDNSAAFVSLAG-KVADQAALKGKRVGVQNGSTHQSFLLEQL----SDVVAVPYSSYQ 169 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + + R D+ GD + + + + + ++ + A+ + + Sbjct: 170 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQ 226 Query: 236 EWYNIVSWTHYAMVTAEELG 255 + ++ A+ E Sbjct: 227 ALLDQLNAALEAVKENGEYA 246 >gi|27381499|ref|NP_773028.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] gi|27354667|dbj|BAC51653.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 275 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 73/222 (32%), Gaps = 10/222 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + A D+KK+G + GI + V ++G G D D RA + + ++ Sbjct: 26 SQAGTPEDVKKKGVVVIGIQGDNPPWGYVDSSGKQDGIDADMGRAFAEYLGVKAE---FV 82 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 PL R AL + ++DIL R + + + + + I+S + Sbjct: 83 PLAVANRIPALTTGRVDILFATMAMLPERAK--AVQYSKPYVANEITLVAAQATPINSNA 140 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + I V +T + + + A F+ A + + A + Sbjct: 141 DMGKYVIGVPRSSTQDTQVTNSAPA---GTEIRRFDDDAATIQALLSGQVQAVGANS--F 195 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 Y +L +P + GD EW + Sbjct: 196 YPQRLNAAKPELGFEPKLHFTALYNGACTRLGDKEWNETANK 237 >gi|15967027|ref|NP_387380.1| putative amino acid-binding periplasmic ABC transporter protein [Sinorhizobium meliloti 1021] gi|307302494|ref|ZP_07582251.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] gi|307316176|ref|ZP_07595620.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] gi|15076300|emb|CAC47853.1| Putative amino acid-binding periplasmic ABC transporter [Sinorhizobium meliloti 1021] gi|306898016|gb|EFN28758.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] gi|306903164|gb|EFN33754.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] Length = 257 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 71/233 (30%), Gaps = 14/233 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + L ++K G LK G F A+G GFDV+ + ++ + P + Sbjct: 21 AEAGQNLDEVKSAGVLKIGTEGTYAPFTYHDASGALVGFDVEIGQEVAKRLGVKPE---F 77 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISS 139 L L + + D + T R+ F I+ + I Sbjct: 78 LEGKWDGLIAGLDANRYDAVINQVGITEERKK--KYDFSEPYIASKAVLIVRGDDEEIKD 135 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G Q+ T+ LA A + + ++ R DA D Sbjct: 136 FADLKGKKSA-QSLTSNFGKLAQASGA-----ELVGTDGFDQSIQLVLTGRADATINDSL 189 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + K + + I +G+ E ++ A + A+ Sbjct: 190 SFLDFKKQKPDANVKIAAEKPD-ADYSGIIIRKGEPELLEAINKAL-AEIKAD 240 >gi|269797244|ref|YP_003311144.1| extracellular solute-binding protein family 3 [Veillonella parvula DSM 2008] gi|269093873|gb|ACZ23864.1| extracellular solute-binding protein family 3 [Veillonella parvula DSM 2008] Length = 260 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 86/252 (34%), Gaps = 16/252 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +K L + ++ G L+ G T F + + + GFDV Sbjct: 4 FKKLTAIALVAVAAMGLLAGCGNDKPKMTQQEGVLRVGSETTFPPFEFTEGD-KYVGFDV 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A+S I K+++ + A+QS ID+++ + T RE L F + Sbjct: 63 DLSEAISKKIG---LKMEFKSMGFDALIPAVQSGDIDMIAAGINATPEREKV--LDFSDV 117 Query: 122 TYFD--GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + I ++ +L+G ++ VQ GT + Sbjct: 118 YFDQGGFITVVRKDNTTIHNMDELAGKTVGVQIGTIPVEMAQKI-----PGTTVKQIDSN 172 Query: 180 EEIDAAYRAHRCD-AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I +A D A + A+Y LK D+ + V P + L + +G+ Sbjct: 173 ANIFMELKAGTIDGAIIDNAVAMYYLKQGADQDLKLVGEPTKSPGTVLG--VKKGNKALQ 230 Query: 239 NIVSWTHYAMVT 250 V+ + Sbjct: 231 EAVNKALKELKE 242 >gi|15925404|ref|NP_372938.1| ABC transporter (periplasmic amino acid-binding protein) [Staphylococcus aureus subsp. aureus Mu50] gi|15927992|ref|NP_375525.1| hypothetical protein SA2202 [Staphylococcus aureus subsp. aureus N315] gi|148268849|ref|YP_001247792.1| extracellular solute-binding protein [Staphylococcus aureus subsp. aureus JH9] gi|150394923|ref|YP_001317598.1| extracellular solute-binding protein [Staphylococcus aureus subsp. aureus JH1] gi|156980729|ref|YP_001442988.1| hypothetical protein SAHV_2398 [Staphylococcus aureus subsp. aureus Mu3] gi|253314751|ref|ZP_04837964.1| hypothetical protein SauraC_00970 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253734170|ref|ZP_04868335.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus TCH130] gi|255007188|ref|ZP_05145789.2| hypothetical protein SauraM_11985 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257794754|ref|ZP_05643733.1| extracellular solute-binding protein, family 3 [Staphylococcus aureus A9781] gi|258407434|ref|ZP_05680577.1| extracellular solute-binding protein, family 3 [Staphylococcus aureus A9763] gi|258422238|ref|ZP_05685150.1| extracellular solute-binding protein family 3 [Staphylococcus aureus A9719] gi|258439630|ref|ZP_05690376.1| ABC transporter [Staphylococcus aureus A9299] gi|258442813|ref|ZP_05691373.1| extracellular solute-binding protein, family 3 [Staphylococcus aureus A8115] gi|258446487|ref|ZP_05694642.1| extracellular solute-binding protein family 3 [Staphylococcus aureus A6300] gi|258450396|ref|ZP_05698488.1| extracellular solute-binding protein, family 3 [Staphylococcus aureus A6224] gi|258455228|ref|ZP_05703188.1| extracellular solute-binding protein, family 3 [Staphylococcus aureus A5937] gi|269204046|ref|YP_003283315.1| amino acid ABC transporter, amino acid-binding protein [Staphylococcus aureus subsp. aureus ED98] gi|282893861|ref|ZP_06302093.1| polar amino acid transport system substrate-binding protein [Staphylococcus aureus A8117] gi|282928447|ref|ZP_06336048.1| polar amino acid transport system substrate-binding protein [Staphylococcus aureus A10102] gi|295405101|ref|ZP_06814914.1| hypothetical protein SMAG_00247 [Staphylococcus aureus A8819] gi|297244158|ref|ZP_06928048.1| hypothetical protein SLAG_00246 [Staphylococcus aureus A8796] gi|13702363|dbj|BAB43504.1| SA2202 [Staphylococcus aureus subsp. aureus N315] gi|14248188|dbj|BAB58576.1| ABC transporter (periplasmic amino acid-binding protein) [Staphylococcus aureus subsp. aureus Mu50] gi|16117310|dbj|BAB69777.1| putative amino acid ABC transporter [Staphylococcus aureus] gi|147741918|gb|ABQ50216.1| extracellular solute-binding protein, family 3 [Staphylococcus aureus subsp. aureus JH9] gi|149947375|gb|ABR53311.1| extracellular solute-binding protein family 3 [Staphylococcus aureus subsp. aureus JH1] gi|156722864|dbj|BAF79281.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|253727865|gb|EES96594.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus TCH130] gi|257788726|gb|EEV27066.1| extracellular solute-binding protein, family 3 [Staphylococcus aureus A9781] gi|257840946|gb|EEV65397.1| extracellular solute-binding protein, family 3 [Staphylococcus aureus A9763] gi|257841669|gb|EEV66106.1| extracellular solute-binding protein family 3 [Staphylococcus aureus A9719] gi|257847406|gb|EEV71408.1| ABC transporter [Staphylococcus aureus A9299] gi|257851934|gb|EEV75868.1| extracellular solute-binding protein, family 3 [Staphylococcus aureus A8115] gi|257854555|gb|EEV77503.1| extracellular solute-binding protein family 3 [Staphylococcus aureus A6300] gi|257856488|gb|EEV79397.1| extracellular solute-binding protein, family 3 [Staphylococcus aureus A6224] gi|257862439|gb|EEV85207.1| extracellular solute-binding protein, family 3 [Staphylococcus aureus A5937] gi|262076336|gb|ACY12309.1| amino acid ABC transporter, amino acid-binding protein [Staphylococcus aureus subsp. aureus ED98] gi|282589842|gb|EFB94926.1| polar amino acid transport system substrate-binding protein [Staphylococcus aureus A10102] gi|282763919|gb|EFC04047.1| polar amino acid transport system substrate-binding protein [Staphylococcus aureus A8117] gi|285818075|gb|ADC38562.1| Cysteine ABC transporter, substrate-binding protein [Staphylococcus aureus 04-02981] gi|294970046|gb|EFG46064.1| hypothetical protein SMAG_00247 [Staphylococcus aureus A8819] gi|297178936|gb|EFH38181.1| hypothetical protein SLAG_00246 [Staphylococcus aureus A8796] gi|312830760|emb|CBX35602.1| L-cystine-binding protein tcyA [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128572|gb|EFT84576.1| hypothetical protein CGSSa03_01000 [Staphylococcus aureus subsp. aureus CGS03] gi|329723698|gb|EGG60227.1| putative cystine-binding periplasmic protein [Staphylococcus aureus subsp. aureus 21172] Length = 259 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 76/256 (29%), Gaps = 13/256 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + FV I + IL +++ K + G F+ +G G+D Sbjct: 1 MKRLLFVMIAFVFILAACGNNSSKDK-EANKDSKTINVGTEGTYAPFSFHDKDGKLTGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + K+++ + F L + + D+++ RE F Sbjct: 60 IDVIKAVAKE---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYK--FSK 114 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F ++ +K I + G + Q T+ LA A + Sbjct: 115 PYTFSSAVLVIRENEKDIKDFDDVKGKKLA-QTFTSNYGKLAKDKGA-----DITKVDGF 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R D D + K I + + D E Sbjct: 169 NQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAKIKAIKGNAEQSRSAFAFSKKADDETVQ 228 Query: 240 IVSWTHYAMVTAEELG 255 + + EL Sbjct: 229 KFNDGLKKIEENGELA 244 >gi|170722938|ref|YP_001750626.1| cationic amino acid ABC transporter periplasmic binding protein [Pseudomonas putida W619] gi|169760941|gb|ACA74257.1| cationic amino acid ABC transporter, periplasmic binding protein [Pseudomonas putida W619] Length = 261 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 81/254 (31%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L + S + LK GI FA + +G GFD Sbjct: 1 MKKLALLGALALSVFSLVSQADEKP----------LKIGIEAAYPPFAFKQPDGSIAGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + +K ++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCEEM---KAKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTK 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M +S L G I VQ G+ + + A + + Sbjct: 106 RYYLTPARLVMKDGATVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKG--ATVVPYGTQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 EI A R D D + L L D + + + A+ +GD Sbjct: 164 NEIYLDVAAGRLDGTVADATLLEDGFLKTDAGKGFAFVGPSFTDAKYFGDGIGIAVRKGD 223 Query: 235 TEWYNIVSWTHYAM 248 ++ A+ Sbjct: 224 DANRERINKAIDAI 237 >gi|77457437|ref|YP_346942.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77381440|gb|ABA72953.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 260 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 89/233 (38%), Gaps = 13/233 (5%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 S L K+ L+ G++ F A+G GFD+D A+ + + K + Sbjct: 14 CMAAGSALA--KEYKELRFGVDPSYAPFESKAADGSLVGFDIDLGNAICAEL---KVKCK 68 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++ + L++ + D + + T RE + F + ++ K GI+ Sbjct: 69 WVESDFDGMIPGLKANKFDGVISSMTVTEAREKV--IDFSSELFSGPTAYVSKKGSGITD 126 Query: 140 VSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 L G ++ + GT E +K ++ +++ + + R DA D+ Sbjct: 127 DVASLKGKTVGYEQGTIQEAYAKAVLDKAGVKTQ--AYQNQDQVYSDLTSGRLDAGIQDM 184 Query: 199 SALYALKLTNDRPSEHVILPDIISK---SPLAPAIIQGDTEWYNIVSWTHYAM 248 L + + +++ + + + + A I +G+TE ++ A+ Sbjct: 185 LQAELGFLKSPQGADYEVSKPVDNHLLPAKTAVGIKKGNTELKALLDKGIKAL 237 >gi|296127372|ref|YP_003634624.1| extracellular solute-binding protein family 3 [Brachyspira murdochii DSM 12563] gi|296019188|gb|ADG72425.1| extracellular solute-binding protein family 3 [Brachyspira murdochii DSM 12563] Length = 286 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 42/269 (15%), Positives = 83/269 (30%), Gaps = 33/269 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-----------------------ILGDIKKRGFLK 37 M K + IL +LF S S + L ++ G L Sbjct: 1 MKKASII-ILSFFLLFAVSCSKEDNKNQPLNNFDIVKEDEMQVQEEDNSLSRVQNAGKLV 59 Query: 38 CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 G++ V NG+ GFD+D R ++ + P++ L + +I Sbjct: 60 LGLDDTFAPMGFVGDNGEIVGFDIDLAREVAKRMGVQLET---KPIDWGSSTSILTNGEI 116 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTT 156 D+L + + R++ + F + + + I+S+ L+G + VQ G Sbjct: 117 DVLWNGLNISDERKLYM--NFSKPYLNNMLIIVKNNDDESINSIDDLAGKIVGVQYGGNY 174 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 E + + + A + R +A D + ++ Sbjct: 175 EQISNHPIVSQ--IKELRQYNGNIDALADLQNDRLNAVIIDD-VFAQYYIAQKNAPFTIV 231 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + A I + D + + Sbjct: 232 YSTPFTDGLYAVGIKKSDKKLLEEIDKIL 260 >gi|169349947|ref|ZP_02866885.1| hypothetical protein CLOSPI_00687 [Clostridium spiroforme DSM 1552] gi|169293160|gb|EDS75293.1| hypothetical protein CLOSPI_00687 [Clostridium spiroforme DSM 1552] Length = 260 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 99/261 (37%), Gaps = 23/261 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WK 57 M K F + + +++ + AS ++K+ + ++ + + +G Sbjct: 4 MKKCFKLLLAGIMVFTLVACGGEEKASEEENVKE---INIAVSPDYPPYESLDTDGKTIV 60 Query: 58 GFDVDFCRALSSAIFDDPS---KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFD D AL +D K + ++ + +Q Q+DI + R Sbjct: 61 GFDADMI-ALFPEYLNDGDTTYKFVWHSMSFENIVSQVQGGQVDIGVSGFTYDKSR---- 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 +A+ Q ++ K I +V L G +I Q+G+T E + A+ + Sbjct: 116 KVAWSKPYTATAQVAVVDKDSDIKTVKDLEGKTIAAQSGSTGEKAAKEIKNAN-----VV 170 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 V+EI ++ + + DA D+ A+ + V+L + + +G+ Sbjct: 171 SVTNVQEIFSSLTSKQYDAVVVDL----AVAQNYVKEQNFVMLEESLLDEKNYIIAKEGN 226 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 E ++++ + +++ Sbjct: 227 DEMIDMINKCIDKFLASDDYK 247 >gi|32034338|ref|ZP_00134538.1| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209121|ref|YP_001054346.1| putative amino-acid ABC transporter-binding protein [Actinobacillus pleuropneumoniae L20] gi|165977093|ref|YP_001652686.1| amino acid ABC transporter, substrate-binding [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190150988|ref|YP_001969513.1| amino-acid ABC transporter-binding protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303249900|ref|ZP_07336102.1| amino acid ABC transporter, substrate-binding [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307250952|ref|ZP_07532878.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307253324|ref|ZP_07535196.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255567|ref|ZP_07537372.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260018|ref|ZP_07541730.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307264345|ref|ZP_07545933.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126097913|gb|ABN74741.1| putative amino-acid ABC transporter-binding protein [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165877194|gb|ABY70242.1| amino acid ABC transporter, substrate-binding [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189916119|gb|ACE62371.1| putative amino-acid ABC transporter-binding protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302650963|gb|EFL81117.1| amino acid ABC transporter, substrate-binding [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306856980|gb|EFM89110.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859188|gb|EFM91229.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306861416|gb|EFM93405.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865854|gb|EFM97730.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306870297|gb|EFN02053.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 260 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 41/247 (16%), Positives = 78/247 (31%), Gaps = 13/247 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K V + I L ++ S L I +G + G F A+G G+ Sbjct: 1 MLKKLSVIAVSAIALATSATSLAKETLLERINAKGTITVGTEGTYAPFTYHDASGKLTGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ RA++ + + + L++ + D+++ T E Sbjct: 61 DVEVTRAVAEKLGVK---VDFKETQWDAMLAGLKADRFDLVANQVGLT-TPERQATFDKS 116 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G ++ + I S + G Q ++ LA A + + Sbjct: 117 AAYSWSGAALVVRNDEQKIKQASDVKGVKTA-QTLSSNYGELARANGA-----DIVPIDG 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + + R DA D AL N + ++ +G+ E Sbjct: 171 MAQGLLLIQQKRADATFNDNLALLDYLKKNPKSGLKIVWESPEKVDA-GFIANKGNQEAL 229 Query: 239 NIVSWTH 245 N +S Sbjct: 230 NKISAAI 236 >gi|327485765|gb|AEA80171.1| Arginine ABC transporter, periplasmic arginine- binding protein ArtI [Vibrio cholerae LMA3894-4] Length = 243 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 83/260 (31%), Gaps = 31/260 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L+ + +K + F + N +GFD Sbjct: 1 MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + AL+ K+ D D T R + F Sbjct: 48 VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ ++ + L G + VQ G+T + L + + + + Sbjct: 103 PYYDNSAAFVSLAG-KVADQATLKGKRVGVQNGSTHQSFLLEQL----SDVVAVPYSSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + + R D+ GD + + + + + ++ + A+ + + Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQ 214 Query: 236 EWYNIVSWTHYAMVTAEELG 255 + ++ A+ E Sbjct: 215 ALLDQLNAALEAVKENGEYA 234 >gi|152995144|ref|YP_001339979.1| extracellular solute-binding protein [Marinomonas sp. MWYL1] gi|150836068|gb|ABR70044.1| extracellular solute-binding protein family 3 [Marinomonas sp. MWYL1] Length = 252 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 80/222 (36%), Gaps = 10/222 (4%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 ++ ++ F + G +GFDVD RAL + + D + L + Sbjct: 23 VQAADKVRFVTEGAWAPFNFIDEAGKPQGFDVDIARALCAKMAAD---CEILTQDWDGLI 79 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 L+ ++ D + + T + + F Y G F+ +++L G +I Sbjct: 80 PGLKVRKFDAIIASMSITE--DRLKVVDFTNKYYSGGLRFMGR-VGEKFDLAKLDGKTIG 136 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 Q T L D F K + ++ + + + R D D Y T++ Sbjct: 137 AQRATLGAQYLEDNFA---GKANLKFYDNQDNVYLDLISGRLDIVLSDELPTYNWLKTSE 193 Query: 210 RPSEHVILPDIISK-SPLAPAIIQGDTEWYNIVSWTHYAMVT 250 S+ D K +A AI +GD + ++ A++ Sbjct: 194 SGSKFEFKGDAFMKTDNIAIAIRKGDDKLKAKLNKALDAILA 235 >gi|71736093|ref|YP_275675.1| arginine/ornithine ABC transporter periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|257482804|ref|ZP_05636845.1| arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289624563|ref|ZP_06457517.1| arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650399|ref|ZP_06481742.1| arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298488142|ref|ZP_07006179.1| Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71556646|gb|AAZ35857.1| arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157421|gb|EFH98504.1| Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320323223|gb|EFW79311.1| arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. glycinea str. B076] gi|320329746|gb|EFW85735.1| arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330866225|gb|EGH00934.1| arginine/ornithine ABC transporter periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330988691|gb|EGH86794.1| arginine/ornithine ABC transporter periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331012327|gb|EGH92383.1| arginine/ornithine ABC transporter periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 258 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 77/246 (31%), Gaps = 25/246 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L +L F+ LK GI FA +G GFD Sbjct: 1 MKKLMLIGAMALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + K ++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M I S+++L G I VQ G+ E + + Sbjct: 106 KYYNSPARLVMKDGTVISDSLAELKGKKIGVQRGSIHERFAREVLAPKG--VEVTPYGSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233 EI A R D D + L L D + P + A+ +G Sbjct: 164 NEIYLDIGAGRLDGTIADATLLQDGFLKTDAGKGYAFTG-PSFTDPKYFGDGIGIAVRKG 222 Query: 234 DTEWYN 239 D Sbjct: 223 DKANLE 228 >gi|194429471|ref|ZP_03061994.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli B171] gi|194412532|gb|EDX28831.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli B171] gi|195183048|dbj|BAG66608.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli O111:H-] Length = 260 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 89/244 (36%), Gaps = 20/244 (8%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ G + F + G+ GFD+D + L I ++ ++ +L++K Sbjct: 28 IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQCTFIENPLDALIPSLKAK 84 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154 +ID + + T R +AF Y ++ K I +V L G + V GT Sbjct: 85 KIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGT 142 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T E +++ + + ++ + I + A R DA D A L ++ Sbjct: 143 TQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDY 200 Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + L + + D E ++ +A + A+ +++K Sbjct: 201 KFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKYF 253 Query: 270 NPDV 273 + DV Sbjct: 254 DFDV 257 >gi|326317637|ref|YP_004235309.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374473|gb|ADX46742.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 283 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 16/259 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFC 64 ++ + ++ + + L I++RG + G+ F + + G++ D Sbjct: 14 LLAGIAAVLTLMAGTAHADATLDKIRQRGKVSIGVLVNGGPFGSIDPASQQLVGWNPDLA 73 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RAL+ + + +Q + R LQ+ ++D+L + + R LG A P Sbjct: 74 RALAKGLGVEADLVQ---VQTATRVQFLQAGKVDLLIASMELNPERAAILGYAPTPFYRV 130 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 G + K GI L G +C+ G++ L + A F+ + Sbjct: 131 GGTAAV-RKDSGIQKWEDLRGKPVCLSQGSSYARPLTAEYGA-----QVQGFKTASDSLL 184 Query: 185 AYRAHRCDAYTGDISALYA-LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A + C A D + ++ L+ + + + +P +G+ + V Sbjct: 185 ALKGGNCVAAVHDSTLIHPLLRTNAEWSQYAAPITAELLPAPSVVWTRKGEADTIAAVDK 244 Query: 244 THY-----AMVTAEELGIT 257 + A E + Sbjct: 245 VVQDWHRSGWLIATEKRLG 263 >gi|170736978|ref|YP_001778238.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|169819166|gb|ACA93748.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 267 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 87/254 (34%), Gaps = 22/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + L SF+ + + ++ GI+ F + +G GFD Sbjct: 1 MNRTAKLLVTALAFAPLASFAQDTAT---------IRWGIDPTYPPFEAKQPDGSLAGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +K ++ AL++++ D++ T R + F Sbjct: 52 IDLRNAICEQL---HAKCVWVEQGFDGMIPALRARKFDVIMSAMTATDER--LKQIDFSN 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + + S + L+G + + GTT E + + ++ Sbjct: 107 KLYASPGALVAPVGSKLLPSAASLAGKRVGIDQGTTQEAYAKAEWATKG--VTIVSYQNQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +++ R DA D + L R + ++ + + A I +GD Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTPRGKGYAFAGPDVTDARITGYGVAMGIRKGD 224 Query: 235 TEWYNIVSWTHYAM 248 + ++ A+ Sbjct: 225 ADMKKRLNDAIVAI 238 >gi|241895266|ref|ZP_04782562.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] gi|241871572|gb|EER75323.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] Length = 494 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 47/288 (16%), Positives = 98/288 (34%), Gaps = 29/288 (10%) Query: 1 MYKDFFVSILCLIILF---------FTSFSTNAS----ILGDIKKRGFLKCGINTGLVGF 47 M K +I+ L+ + F S NA L IKK G L G + + Sbjct: 1 MKKWMKKAIVLLMAIGMFISSGIGIFGVSSANADETDPTLQHIKKSGQLVVGTSAEYAPY 60 Query: 48 AE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 + GFD+D R ++ + + ++ A+++ +ID+ Sbjct: 61 EFHKTINGQDKIIGFDMDVARTIAKHLGVK---LVVQDMSFDALLGAVKTGKIDMAIAGM 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLAD 162 T R+ + F Y D + K+ +++ QL A + Q ++ D Sbjct: 118 TSTPERKK--EVNFSTPYYNDKNVILTLKQNKNKFATLQQLQNAKLGAQVSSSQASLAGD 175 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 + +RV ++ + DA + + +D+ + + I + Sbjct: 176 L-----TSKPIVSVKRVTDMVTQLSQKKVDAVVVAQTTAKSYLDQSDQFAITKAVLPIKT 230 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYA-MVTAEELGITQKNINQVSKDTT 269 + ++ + + V A ++ A K I Q++K + Sbjct: 231 GNAVSVVMNKNAPVLKEKVDGILKAHVIGAPLHRWQNKAIKQMNKKES 278 >gi|153800747|ref|ZP_01955333.1| arginine-binding periplasmic protein 1 [Vibrio cholerae MZO-3] gi|124123722|gb|EAY42465.1| arginine-binding periplasmic protein 1 [Vibrio cholerae MZO-3] Length = 243 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 82/258 (31%), Gaps = 27/258 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L+ + +K + F + N +GFD Sbjct: 1 MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + AL+ K+ D D T R + F Sbjct: 48 VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ ++ + L G + VQ G+T + L + + + + Sbjct: 103 PYYDNSAAFVSLAG-KVADQAALKGKRVGVQNGSTHQSFLLEQL----SDVVAVPYSSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTEW 237 + + R D+ GD + + D E+ + + A+ + + Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEW-FKGDNKLEYVGERVTNPQYFGNGFGIAVNKDNQAL 216 Query: 238 YNIVSWTHYAMVTAEELG 255 + ++ A+ E Sbjct: 217 LDQLNAALEAVKENGEYA 234 >gi|147921224|ref|YP_684964.1| ABC-type glutamate import system, periplasmic component [uncultured methanogenic archaeon RC-I] gi|110620360|emb|CAJ35638.1| ABC-type glutamate import system, periplasmic component [uncultured methanogenic archaeon RC-I] Length = 260 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 34/238 (14%), Positives = 69/238 (28%), Gaps = 12/238 (5%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDP 75 T G L F + G++ GFD+D + + Sbjct: 21 VTPTPAANVTQNLTMTPGVLSVATEAHYPPFENINTTTGEFYGFDIDLMNEIGKELG--- 77 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD-GQGFIMHKK 134 +++Y A+Q+ + D + + F Y GQ + Sbjct: 78 LEVKYTDHAFDTIIPAVQAGKFDCAISAFTI--RPDRQQSIDFTDWYYESAGQAIVTKPG 135 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + S L G + QAGT + + + + E A + +A Sbjct: 136 SSIKNASDLVGKIVGAQAGTVGFDATKAI--EGMPEENVKSYATMNEAFMALKKGEVEAV 193 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 GD D P ++ + + + + + + ++ A + A+ Sbjct: 194 VGDYPVCEPYY--RDTPGDYALAGPLSETEYFGIVVNKQNKQLTAAINEAL-ANIKAD 248 >gi|29829027|ref|NP_823661.1| glutamate binding periplasmic protein [Streptomyces avermitilis MA-4680] gi|29606133|dbj|BAC70196.1| putative glutamate ABC transporter substrate-binding protein [Streptomyces avermitilis MA-4680] Length = 277 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 65/201 (32%), Gaps = 7/201 (3%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 + GI G + G + GFDVD ++ + +I++ + +R LQ Sbjct: 39 ITIGIKFDQPGIGQKTPQG-YSGFDVDVATYIAKQLGYKADQIEWKESKSADRETMLQRG 97 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGT 154 + ++ + T R + F Q ++ I S S L+ +C G+ Sbjct: 98 DVKFIAASYSITPER--QEKVDFAGPYLLAHQDVLVRADDNSIKSPSDLNSKKLCSVTGS 155 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T+ + D K + + + + D T D S L + Sbjct: 156 TSAQNVKDKLA---PKANLLKYPTYSACLTGLQNKAIDGLTTDDSILAGYAAQASFKGKF 212 Query: 215 VILPDIISKSPLAPAIIQGDT 235 + ++ + +G Sbjct: 213 KLAGFKMTNENYGIGVKKGSD 233 >gi|323494404|ref|ZP_08099513.1| ABC-type transport system periplasmic substrate-binding protein [Vibrio brasiliensis LMG 20546] gi|323311334|gb|EGA64489.1| ABC-type transport system periplasmic substrate-binding protein [Vibrio brasiliensis LMG 20546] Length = 257 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 86/268 (32%), Gaps = 26/268 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGF 59 M V++ C + + + A LK GI FA ANG + G+ Sbjct: 1 MKLAKLVALSCTALSLAMAQAQAAP----------LKVGIGTESYPPFAVPDANGQYSGW 50 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D + + + + +L + ++DI++ + T R + F Sbjct: 51 EIDIANEICKQA---KLECEIVATAWDGIIPSLVAGKVDIIAASLSITDERSKV--IDFS 105 Query: 120 PITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G + I + L+G I VQ+G+ + + +FK ++ Sbjct: 106 NKYYQSGASLAVAAGSDITPTAESLAGKKIGVQSGSIHQSYVLKHFK----DAEIKEYQT 161 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQG 233 +E + + R DA D + L T + + + + + +G Sbjct: 162 QDEANQDLFSGRIDATLADATVLGEFLTTREGELCCSSAGLVKNDEAILGKGIGFGLRKG 221 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNI 261 + E + + N Sbjct: 222 NDELKAKLDQAIVDIRQNGTYDKITNNY 249 >gi|239627923|ref|ZP_04670954.1| glutamine-binding periplasmic protein [Clostridiales bacterium 1_7_47_FAA] gi|239518069|gb|EEQ57935.1| glutamine-binding periplasmic protein [Clostridiales bacterium 1_7_47FAA] Length = 282 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 70/212 (33%), Gaps = 12/212 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L N + G+ G D + +A++ + +++ + + S Sbjct: 64 VLVMATNAEFPPYEFHDG-GEIVGIDAEIAKAIADELG---MELEIEDIAFDSIIPEITS 119 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 + D+ T + + F Q I+ + I+S L+G + VQ GT Sbjct: 120 GKADMGLAGMTVTE--DRKQSVDFTDTYAKASQKIIVKEDSAIASPDDLTGVIVGVQQGT 177 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T ++ ++D + + E A + DA D + Sbjct: 178 TGDIYVSDLEA---DGTTVERYNKGFEAVQALSQGKIDAVVIDGEPAKTFVAQTEG---L 231 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 IL + + A A+ +G+TE ++ Sbjct: 232 KILEESFTDEEYAIAVKKGNTELLEKINGALK 263 >gi|224824085|ref|ZP_03697193.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] gi|224603504|gb|EEG09679.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] Length = 272 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 77/262 (29%), Gaps = 21/262 (8%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKR----------GFLKCGINTGLVGFA 48 M + ++ L L T+ A + G + F Sbjct: 1 MKQTRRTLLAGLLLSAFALTACGKKAEAPAEQAASSAPAQATAAAKEYLVGSDASYAPFE 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + + +GFDV+ A + K++++ + F L D+L+ T Sbjct: 61 FLNDKKEVQGFDVEVLTAAAEKGG---FKVKFVNTPWEGMFATLDQGDRDLLASAITITD 117 Query: 109 LREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ + F + Q + + + L + VQ GTT + + Sbjct: 118 ERKK--NMDFSDPYFEARQLIAVGKNVTDVKTFQDLKNKKVAVQTGTTGDEVVQKLLGKT 175 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPL 226 N + FE + DA GD + + N V + Sbjct: 176 N--PNIKRFESMPLALKELENGGVDAAVGDNGVVSNYVINNPQNGLATVEDTKSFAPEYY 233 Query: 227 APAIIQGDTEWYNIVSWTHYAM 248 A +G+ E V+ A+ Sbjct: 234 GFAAKKGNAEVLAKVNAGLKAI 255 >gi|307727764|ref|YP_003910977.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] gi|307588289|gb|ADN61686.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] Length = 276 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 76/230 (33%), Gaps = 11/230 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 S + +A L +I K G ++ G+ F + + G+D+D + A+ Sbjct: 33 SAFSPAAHADALDNIAKTGTVRIGVFMDYPPFGSIGPDMKPMGYDIDVANLIGRAL---N 89 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +K++ + + R L + D+L T RE + F K Sbjct: 90 AKVELVQVTGDNRMAYLADHKADMLLS-VGQTPEREKV--IDFSKPYAPYYLAVFGPKAL 146 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + + + L+G SI V GT +L++ + F+ +A+ + + Sbjct: 147 PVKNAADLAGKSISVARGTLEDLSVTKIAP---PTANIKRFDDPNGAISAFISGQVQLMV 203 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + P+ + SP + + + V T Sbjct: 204 VGNDVGATILAR--HPANDPEQKFSLFSSPDHVGLNKNEPRLKQKVDETI 251 >gi|238750582|ref|ZP_04612082.1| Amino acid-binding protein [Yersinia rohdei ATCC 43380] gi|238711230|gb|EEQ03448.1| Amino acid-binding protein [Yersinia rohdei ATCC 43380] Length = 262 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 83/246 (33%), Gaps = 15/246 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+K + CL + S + I G F + +GFD Sbjct: 1 MFKRLMLVGTCLAAVLSASSA--------IAAEPTYVVGSGATYRPFEYENSQKQLEGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A+ A + +I+ + + F L S DI+ T R + F Sbjct: 53 IDIIKAIGKA---EGFQIKLVNTPWEGIFATLGSGDRDIIISGITITDKR--QQMVDFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q ++ K + S++ L ++ V +T ++ +++ + F+ Sbjct: 108 PYFPAEQTIVVAKGSKVDSIAALKDLNVGVVNSSTGDIVVSNVLGKN--STAIKRFDNTP 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A GD+ T+ + ++ D + A+ +G+ E N Sbjct: 166 LMLQELYEDGIAAAVGDVGVAKFYLKTHPEKAFELVSDDKFERQYFGIAVAKGNEELRNK 225 Query: 241 VSWTHY 246 ++ Sbjct: 226 INSGLQ 231 >gi|213428679|ref|ZP_03361429.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 239 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 86/251 (34%), Gaps = 26/251 (10%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + L L + S +A L G + + V A+ GFD+D A+ Sbjct: 1 MLLASLSVHAASVSART---------LHFGTSATYAPYEFVDADNKIVGFDIDVANAVCK 51 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + ++ + + L+ K+ D + D T RE ++F Y Sbjct: 52 EM---QAECSFTNQSFDSLIPGLRFKKFDAVIAGMDMTPKRE--QQVSFSQPYYEGLSAV 106 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ +K + + L G + ++ GTT + L D P+ ++ + + Sbjct: 107 VVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYLNAFTDLKNN 162 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244 R + GD + A+ ++ I+ + S A+ +G+ ++ Sbjct: 163 RLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKGNNALLQEINAA 219 Query: 245 HYAMVTAEELG 255 + + E Sbjct: 220 LDKVKASPEYA 230 >gi|16761279|ref|NP_456896.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141025|ref|NP_804367.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213022390|ref|ZP_03336837.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213162278|ref|ZP_03347988.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213418061|ref|ZP_03351136.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213426990|ref|ZP_03359740.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581827|ref|ZP_03363653.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213622201|ref|ZP_03374984.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213852676|ref|ZP_03382208.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289812393|ref|ZP_06543022.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289827475|ref|ZP_06546087.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25296355|pir||AH0800 histidine-binding periplasmic protein [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503578|emb|CAD07586.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29136650|gb|AAO68216.1| histidine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 260 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 91/245 (37%), Gaps = 20/245 (8%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ G + F A G+ GFD+D + L + I ++ ++ +L++ Sbjct: 27 KIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCNRI---NTQCTFVENPLDALIPSLKA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153 K+ID + + T R +AF Y ++ K I +V+ L G + V G Sbjct: 84 KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVASLKGKRVGVLQG 141 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT E +++ + + ++ + I + A R DA D A L + Sbjct: 142 TTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPIGKD 199 Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + + L + + D E ++ +A + A+ +++K Sbjct: 200 YKFGGPAVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKY 252 Query: 269 TNPDV 273 + DV Sbjct: 253 FDFDV 257 >gi|257460051|ref|ZP_05625155.1| arginine-binding periplasmic protein 1 [Campylobacter gracilis RM3268] gi|257442492|gb|EEV17631.1| arginine-binding periplasmic protein 1 [Campylobacter gracilis RM3268] Length = 246 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 76/235 (32%), Gaps = 21/235 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++ S++ + L G N F V N GFD Sbjct: 1 MKKFMRFLVAGALL--------CGSLIAKDIAKDTLIVGTNAEYPPFEFVDENSKVTGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L+ + ++ A++S +ID+++ T R+ + F Sbjct: 53 MDLVAELAKRAGVKYEILN---MSFDGLIPAIKSGKIDMIASGMSATPARKK--AIDFTA 107 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y ++ K ++S + L G + Q GT EL + D A + Sbjct: 108 PYYKVENLYVKRKDDSSLNSKADLQGKRLAAQLGTIQELAIRDIKGAEVSATENVFV--- 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + + + DA D S Y ND + + + A +G Sbjct: 165 --AVMSLKNKKIDALCVDSSVGYEYLKKNDDLTAF--FKESDGSEGFSIAFDKGK 215 >gi|237813418|ref|YP_002897869.1| polar amino acid uptake abc transporter, paat family, periplasmic amino acid-binding protein [Burkholderia pseudomallei MSHR346] gi|237506059|gb|ACQ98377.1| polar amino acid uptake abc transporter, paat family, periplasmic amino acid-binding protein [Burkholderia pseudomallei MSHR346] Length = 320 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 68/223 (30%), Gaps = 13/223 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 +L +K+ G LK + F +G +GFDVD + +++ + P Q++ Sbjct: 82 DLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDVDVAKEVAARLGVKP---QFVTTE 138 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQ 142 LQ+ + D++ T R L F + I + Sbjct: 139 WSGILAGLQAGKFDVIVNQVGITPAR--RQALDFSQPYVYSAAQLIQRADDKHDYGAPGA 196 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G I V GT AD K + E A R D D L Sbjct: 197 LQGKRIGVTLGT----NFADLAKTLQ-GVDVKTYPGAPEKLRDVAAGRIDVSMDDRLMLP 251 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L P ++ + +G+ ++ + Sbjct: 252 YLIKNAHMPLR-PGATINGGETQMGIPFRKGNPKFAKALDDAL 293 >gi|160901196|ref|YP_001566778.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160366780|gb|ABX38393.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 286 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 97/258 (37%), Gaps = 16/258 (6%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCR 65 ++ + + + + + L IK+RG + G+ F + + G++ + R Sbjct: 19 LTFIAAALALACTQARADATLDKIKQRGKVTIGVLVNGGPFGSIDPSTQQLVGWNPELAR 78 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL+ + + +Q + R LQ+ ++D+L + + R +LG A P Sbjct: 79 ALAKGLGVEAELVQ---VQTATRVQFLQAGKVDLLIASMELNPDRAETLGYAPTPFYRVG 135 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G + K GI+ L G +CV G++ LA + A ++ + A Sbjct: 136 GIAAV-RKGSGIARWEDLRGKPVCVSQGSSFAKPLASEYGA-----QVHGYKSSSDSLLA 189 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + C A D + +Y L +N +++ + + +P +G+ + V Sbjct: 190 LKGGNCVAAVHDSTLIYPLLRSNPEWAQYSAPIAGEVLPAPSVVWTRKGEADTIAAVDKV 249 Query: 245 HY-----AMVTAEELGIT 257 + A E + Sbjct: 250 VQDWHRTGWLIAAEKRVG 267 >gi|126453748|ref|YP_001067295.1| polar amino acid ABC transporter periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106a] gi|226193774|ref|ZP_03789376.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pakistan 9] gi|242315677|ref|ZP_04814693.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106b] gi|126227390|gb|ABN90930.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106a] gi|225934079|gb|EEH30064.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pakistan 9] gi|242138916|gb|EES25318.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1106b] Length = 320 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 68/223 (30%), Gaps = 13/223 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 +L +K+ G LK + F +G +GFDVD + +++ + P Q++ Sbjct: 82 DLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDVDVAKEVAARLGVKP---QFVTTE 138 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQ 142 LQ+ + D++ T R L F + I + Sbjct: 139 WSGILAGLQAGKFDVIVNQVGITPAR--RQALDFSQPYVYSAAQLIQRADDKHDYGAPGA 196 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G I V GT AD K + E A R D D L Sbjct: 197 LQGKRIGVTLGT----NFADLAKTLQ-GVDVKTYPGAPEKLRDVAAGRIDVSMDDRLMLP 251 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L P ++ + +G+ ++ + Sbjct: 252 YLIKNAHMPLR-PGATINGGETQMGIPFRKGNPKFAKALDDAL 293 >gi|229591463|ref|YP_002873582.1| putative ABC transporter cystine-binding periplasmic protein [Pseudomonas fluorescens SBW25] gi|229363329|emb|CAY50451.1| putative ABC transport system, cystine-binding periplasmic protein [Pseudomonas fluorescens SBW25] Length = 275 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 71/252 (28%), Gaps = 21/252 (8%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGFDVDFCR 65 + L L + L I + L G+ F+ + GFDVD + Sbjct: 9 AAAFSLTFLLASPAVFAGQTLDRITQSKQL-VGVLMENYPPFSFLNEQNQLDGFDVDVTK 67 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++ + ++ + + + + D+ + + R F Sbjct: 68 AVADRLGVK---LKLETPSWEVIAAGRWNGRYDVCICSMTPSAARGQVFNFPFEY-YASP 123 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP---------IVF 176 + I S + LSG + V + +T E LA + + Sbjct: 124 AVVVVNADDNAIKSAADLSGKKVGVVSASTYEAYLAKDLVIEGASKPIDYPFKAVQAVPY 183 Query: 177 ERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + R DA + L K D I D + P A +G Sbjct: 184 DNETIAFQDLALGTGKRLDAMVTN---LVTAKERIDHDPRFKITGDALYAEPNVVATEKG 240 Query: 234 DTEWYNIVSWTH 245 D W ++ Sbjct: 241 DPAWDAKLAQVL 252 >gi|161612912|ref|YP_001586877.1| hypothetical protein SPAB_00618 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161362276|gb|ABX66044.1| hypothetical protein SPAB_00618 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 260 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 90/245 (36%), Gaps = 20/245 (8%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ G + F A G+ GFD+D + L I ++ ++ +L++ Sbjct: 27 KIRIGTDPTYAPFESKNAQGELVGFDIDLVKELCKRI---NTQCTFVENPLDALIPSLKA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153 K+ID + + T R +AF Y ++ K I +V+ L G + V G Sbjct: 84 KKIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVASLKGKRVGVLQG 141 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT E +++ + + ++ + I + A R DA D A L + Sbjct: 142 TTQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKD 199 Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + + L + + D E ++ +A + A+ +++K Sbjct: 200 YKFGGPAVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKY 252 Query: 269 TNPDV 273 + DV Sbjct: 253 FDFDV 257 >gi|300780997|ref|ZP_07090851.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium genitalium ATCC 33030] gi|300532704|gb|EFK53765.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium genitalium ATCC 33030] Length = 284 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 41/247 (16%), Positives = 85/247 (34%), Gaps = 14/247 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC- 64 VS+L + L + +L I + G + G G + ++ +G G D+D Sbjct: 10 LVSVLGVSGLSACGSPDDQDLLAQI-ESGRVDVGSAFTNPGLSMMRDDGSPAGLDIDIAT 68 Query: 65 ---RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 +++ D +I++ +R L + +D+++ N R + ++F Sbjct: 69 YVINSIADDNGWDHPEIEWRETPPGQRASLLDNGYVDMVASNYSIDAKR--TKEVSFAGP 126 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Q + I+ + L G ++C GTT TL + ++ Sbjct: 127 YLLTHQALLTVDGSDITGLESLDGKNLCFVTGTTAAKTLREDIP----GVVLAEYDSYTA 182 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL---PDIISKSPLAPAIIQGDTEWY 238 A RA DA + D + L + V L ++ + + + Sbjct: 183 CLDALRAGAVDALSTDAAILSGFSAHEPGVFQLVPLERDGAPLNDEHYGLGLPRDNDASV 242 Query: 239 NIVSWTH 245 + V+ Sbjct: 243 SAVNEAL 249 >gi|229587875|ref|YP_002869994.1| putative amino acid ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229359741|emb|CAY46590.1| putative amino acid ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 250 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 45/236 (19%), Positives = 77/236 (32%), Gaps = 22/236 (9%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 YK F ++ + T+ + LK GI F A+G+ GFD Sbjct: 4 YKKFLLAAAVSMAFSATAMAE------------TLKMGIEAAYPPFNNKDASGNVVGFDK 51 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D AL + + + ++ + AL +K+ D L + T R+ + F Sbjct: 52 DIGDALCAKMKVEKCEV--YVSDWDGIIPALNAKKFDFLVSSLSITDERK--QAVDFTDP 107 Query: 122 TYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + FI K + + L G I Q T L D +++ Sbjct: 108 YYSNKLQFIAPKATADFKTDAAYLKGKVIGAQRATLAGTYLEDKLP----DTEAKLYDTQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E + R D D Y + D + ++ + A+ +GD Sbjct: 164 ENAYLDLTSGRLDGILADKYVQYEWLKSKDGSAYEFKGDPVVESDKIGIAVRKGDP 219 >gi|15894167|ref|NP_347516.1| periplasmic amino acid binding protein [Clostridium acetobutylicum ATCC 824] gi|15023776|gb|AAK78856.1|AE007603_7 Periplasmic amino acid binding protein [Clostridium acetobutylicum ATCC 824] gi|325508295|gb|ADZ19931.1| Periplasmic amino acid binding protein [Clostridium acetobutylicum EA 2018] Length = 272 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 90/254 (35%), Gaps = 12/254 (4%) Query: 1 MYKDFFVSILCLIILF--FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK---ANGD 55 M K + L++ FT + + + D + +K G +T FA + + Sbjct: 1 MKKKLITLSMALLMSVGIFTGCTQSGTSNSDNSDKNVIKVGTSTDYRPFAFINQGESQDK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 KG ++D + + K++Y+ N L S ++D ++ T R+ Sbjct: 61 VKGLEIDVWNEIGKR---NNWKVKYVIANWNGLIGMLDSGKVDTVAHQVTVTEERKG--K 115 Query: 116 LAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + G + K + S+ L+G ++ V++G + Y A+ K + Sbjct: 116 YYFSDPYVYSGVQLAVKKGNNSVQSLKDLNGKTVAVESGMNFYKAIEKYN-ANGGKVNIK 174 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 + I + R DA D A+ + E P ++ + Sbjct: 175 QYSDYNSIFSEVNLGRADALVEDKLAIMDTIKNSKYDLELAGKPIENMENAYPFIKNTAN 234 Query: 235 TEWYNIVSWTHYAM 248 + + ++ T AM Sbjct: 235 KQKVDKINKTLAAM 248 >gi|313115217|ref|ZP_07800701.1| bacterial extracellular solute-binding protein, family 3 [Faecalibacterium cf. prausnitzii KLE1255] gi|310622495|gb|EFQ05966.1| bacterial extracellular solute-binding protein, family 3 [Faecalibacterium cf. prausnitzii KLE1255] Length = 273 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 75/225 (33%), Gaps = 13/225 (5%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 + L +I+ G L + ++ + G+DV+ RA++ Sbjct: 23 AASGTAASVAPAAGDQLSNIQSSGKLIVALEGAWQPWSYHDESDTLVGYDVEVSRAIAEK 82 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + +P Y+ + F L + + DI+ + T R + F + Sbjct: 83 LGVEPE---YVESDWDSLFAGLDAGRYDIVCNGVEVTDERAKT--YDFTEPYGYIHTALA 137 Query: 131 MHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + K I+S L G + +T LA+ + A + +EE A Sbjct: 138 VRKDNDEITSFEDLKGKTTANSLASTYME-LAESYGA-----TVQGIDTLEETIQLLTAG 191 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 R DA + Y + + ++ S +A + +GD Sbjct: 192 RIDATLNADVSFYDYLNVHPDA-DFKLVAQTEDASHVAIPLRKGD 235 >gi|315655534|ref|ZP_07908433.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Mobiluncus curtisii ATCC 51333] gi|315490189|gb|EFU79815.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Mobiluncus curtisii ATCC 51333] Length = 314 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 31/254 (12%), Positives = 70/254 (27%), Gaps = 17/254 (6%) Query: 2 YKDFFVSILCLIILFFTSFST-----NASILGDIKKR--GFLKCGINTGLVGFAEVKAN- 53 K V+ + + ++ K G + + Sbjct: 43 KKIVSVAAGFALAFSLAGCGGGESNNAGNAGDNVAKSAGDKFVVGFDANFPPYGYKDEKT 102 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G++ GFD+D ++ + ++ P++ + + L S +D L + Sbjct: 103 GEYTGFDMDLATEVAKR---NHWTLEKKPIDWDSKDMQLYSGSVDCLWNGFTMNGREDK- 158 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH--NMKY 171 + + F+ + + L+G ++ VQA ++ L D Sbjct: 159 --YTWSKPYVDNSIVFVTRSADNLKDAADLAGKTVIVQADSSGLAALEDESNKELLASFK 216 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + A DA D+ T + + I+ + Sbjct: 217 TLNKVPDYNNAFMSLEAGAADAVVVDLGVANYQLETRQKGM-YTIMEKPVQTEQYGIGFK 275 Query: 232 QGDTEWYNIVSWTH 245 G+ + V T Sbjct: 276 LGNKALRDQVQTTL 289 >gi|229506084|ref|ZP_04395593.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholerae BX 330286] gi|229510059|ref|ZP_04399539.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholerae B33] gi|229516380|ref|ZP_04405827.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholerae RC9] gi|229528368|ref|ZP_04417759.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholerae 12129(1)] gi|229605615|ref|YP_002876319.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholerae MJ-1236] gi|229334730|gb|EEO00216.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholerae 12129(1)] gi|229346261|gb|EEO11232.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholerae RC9] gi|229352504|gb|EEO17444.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholerae B33] gi|229356435|gb|EEO21353.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholerae BX 330286] gi|229372101|gb|ACQ62523.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholerae MJ-1236] Length = 256 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 83/260 (31%), Gaps = 31/260 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L+ + +K + F + N +GFD Sbjct: 14 MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + AL+ K+ D D T R + F Sbjct: 61 VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ ++ + L G + VQ G+T + L + + + + Sbjct: 116 PYYDNSAAFVSLAG-KVADQAALKGKRVGVQNGSTHQSFLLEQL----SDVVAVPYSSYQ 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + + R D+ GD + + + + + ++ + A+ + + Sbjct: 171 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQ 227 Query: 236 EWYNIVSWTHYAMVTAEELG 255 + ++ A+ E Sbjct: 228 ALLDQLNAALEAVKENGEYA 247 >gi|269127884|ref|YP_003301254.1| extracellular solute-binding protein family 3 protein [Thermomonospora curvata DSM 43183] gi|268312842|gb|ACY99216.1| extracellular solute-binding protein family 3 [Thermomonospora curvata DSM 43183] Length = 301 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 37/236 (15%), Positives = 77/236 (32%), Gaps = 13/236 (5%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKI 78 + A + IK G +K G + + + + G+DV+ +A+++ + Sbjct: 46 AALAAMVPDAIKSDGKIKVGTDASYPPNESIDPSTQEIVGWDVELFKAVAAKLGLKAE-- 103 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + +QS + +I + RE + F Sbjct: 104 -FENAGFDTIIPGVQSGKYEIGVSSFTDDKEREK--AVDFVTYYSAGTAWAAPRGNPKNV 160 Query: 139 SVSQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + G +I VQ GT L + +A +V ++ E++ A + DA Sbjct: 161 NPDDACGLTIGVQQGTVQVKDLEERSKKCTEAGKPAIKTVVRKQQTEVNNDLVAGKIDAM 220 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 D + T + I+ + +P AI + ++ V A++ Sbjct: 221 AADSPVVGGAVKTTGK---LEIIGQVYDTAPYGYAINKNAGQFKEAVLGAIKALIA 273 >gi|307320132|ref|ZP_07599552.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] gi|306894178|gb|EFN24944.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] Length = 260 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 90/245 (36%), Gaps = 21/245 (8%) Query: 36 LKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 +K GI F A+G+W+G++++F +A+ + D P+ AL S Sbjct: 27 VKVGIAAEPYPPFTSPDASGNWEGWEIEFMKAMCAEAKLD---CVVTPVAWDGIIPALTS 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153 K+ID++ + T R + + F Y G I K I + L+G +I VQ Sbjct: 84 KKIDMIIGSMSITAERLKT--IDFSDKYYNTPTGIIGAKGDDIKPTPEGLAGKTIGVQVS 141 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 T + +F ++ +E + A R DA D AL A ++ Sbjct: 142 TVHQAYAMKHFAPAG--VEVKEYQTQDEANQDLAAGRVDAVQADAIALDAFLKSDQGKQC 199 Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 ++ + + +G+TE V+ A+ + SK Sbjct: 200 CDYKGEVAEDVDVIGPGVGVGLRKGETELKEKVNAAIKAIRE-------NGTYDAFSKKY 252 Query: 269 TNPDV 273 + D+ Sbjct: 253 FDFDI 257 >gi|296313864|ref|ZP_06863805.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria polysaccharea ATCC 43768] gi|296839592|gb|EFH23530.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria polysaccharea ATCC 43768] Length = 275 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFFTS--------------FSTNASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L + + S++ I +G + G Sbjct: 2 MLKKFILGGMTALVLAACGGSEGGSGASSAPAQSAVSGSLIERINNKGTVTVGTEGTYAP 61 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 62 FTYHDKDGKLTGYDVEVTRAVADKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 118 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + I S++ + G + KA Sbjct: 119 T-SPERQATFDKSEPYSWSGAVLVARNDSNIKSIADIKGVKTAQSLTSNYGE------KA 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 172 KAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215 >gi|295103475|emb|CBL01019.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Faecalibacterium prausnitzii SL3/3] Length = 278 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 43/228 (18%), Positives = 80/228 (35%), Gaps = 19/228 (8%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + G L N + +G+ +G DVD +A++ + ++Q + L+ Sbjct: 58 EAGKLTMATNATFPPYEMTTDSGEIEGIDVDTAKAIAEKLG---LELQIDDMEFDAALLS 114 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 +Q + DI+ T R+ + F Q I+ I+S L+G I Q Sbjct: 115 VQQGKADIVMAGVTVTDERKAVM--DFSDSYATGIQSIIVPNDSDIASPDDLAGKKIGTQ 172 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 GTT + +D F + ++ A + DA D + A + P Sbjct: 173 RGTTGYIYCSDDFGE----DSVVAYDSGLTAVQALNNGQVDAVVIDNA--PATEYVAANP 226 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 +L ++ A + +G + + V+ EEL Sbjct: 227 G-LKVLDTSYAEEDYAIGMAKG-SALEDAVNKAL------EELKADGT 266 >gi|257869938|ref|ZP_05649591.1| amino acid ABC transporter [Enterococcus gallinarum EG2] gi|257804102|gb|EEV32924.1| amino acid ABC transporter [Enterococcus gallinarum EG2] Length = 489 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 91/259 (35%), Gaps = 19/259 (7%) Query: 1 MYKDFFVSILCLIILFFTSFS-TNASILG----DIKKRGFLKCGINTGLVGFAE---VKA 52 M K F +++ +++ F + +A IK+ G L G++ + + Sbjct: 1 MCKWFASTMILIVLFFCVTTKLVHAETTDPVYEKIKQNGALIVGLSADYAPYEFHTTIDG 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFD+ + ++ + D ++ L AL++ +ID++ T R+ Sbjct: 61 KDEIVGFDLSIAKKIADDLGVD---LKIEELGFDALLGALKTGKIDLVISGMAATDERKK 117 Query: 113 SLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + F Q I+ K+ S + +G ++ Q TT E + Sbjct: 118 --EVNFSDTYMEVQQKVIVRKEDQNRFQSTADFNGVAVGAQKQTTQEELAKNEL----SG 171 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 ++V ++ + + DA + A +ND + + A AI Sbjct: 172 SLVTSLQKVPDLITNLNSKKVDAVVMEGPVAEAYVQSNDNLAIADDVVFEKGTKETAIAI 231 Query: 231 IQGDTEWYNIVSWTHYAMV 249 + ++ + +V Sbjct: 232 SKEAPLLLEKINASIKTIV 250 >gi|90578867|ref|ZP_01234677.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio angustum S14] gi|90439700|gb|EAS64881.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio angustum S14] Length = 242 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 88/248 (35%), Gaps = 28/248 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K SI+ L+ + DIK + F + N +GFD Sbjct: 1 MNKILLASIIGLVSSQAMA--------QDIK------FAMEATYAPFEYMDENNQIQGFD 46 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL + + + + AL+ K+ D D T R ++F Sbjct: 47 VDIAKALCKEM---DATCTFHNQSFDSLIPALKFKRYDAAISAMDITEAR--QQQVSFTQ 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + GFI K ++ V+ L G + VQ G+T + L D + + + Sbjct: 102 PYYDNAAGFISIKG-KVTDVAALKGKRVGVQNGSTHQSYLTDQMP----GVTAVPYTSYQ 156 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK---SPLAPAIIQGDTEW 237 + + R D+ GD + + +D +V P K + A+ +G+ E Sbjct: 157 DAFIDMKNGRIDSVFGDTAVIAEWLKKDDN-LAYVGKPVTNPKYFGNGFGIAVNKGNQEL 215 Query: 238 YNIVSWTH 245 ++ Sbjct: 216 VKQLNTAL 223 >gi|93006752|ref|YP_581189.1| extracellular solute-binding protein [Psychrobacter cryohalolentis K5] gi|92394430|gb|ABE75705.1| extracellular solute-binding protein, family 3 [Psychrobacter cryohalolentis K5] Length = 278 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 85/266 (31%), Gaps = 28/266 (10%) Query: 1 MYKDFFVSILCLIILFF----------------TSFSTNASILGDIKKRGFLKCGINTGL 44 M + +++ +L T+ S + +L I G + G Sbjct: 1 MKRRTLLALAASTVLLAACGQSPTNDAETKATDTAASGGSDLLQRINNGGTINVGTEGTY 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F +G G+DV+ RA++ + +++ L +K+ D+++ Sbjct: 61 PPFTYHDESGKLTGYDVEVTRAVADKLGVK---VEFQETQWDAMLAGLDAKRFDMVANQV 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADY 163 T E + G + K SS L G Q+ T+ LA+ Sbjct: 118 SLT-TPERLAKYDKAQAYSWSGAVVLAPKDDNRYSSWEALKGLRSA-QSLTSNYGELAER 175 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 ++A I + + + + R D D A+ + + L +S+ Sbjct: 176 YQA-----EVIPVDGMAQAIQLVKQDRADFTMNDNLAILDYLKKFPDAALEIKLTAPVSE 230 Query: 224 SP-LAPAIIQGDTEWYNIVSWTHYAM 248 +I+GD + A+ Sbjct: 231 QTGSGLVLIKGDDAVLAKLDEAMAAL 256 >gi|323495726|ref|ZP_08100796.1| amino acid ABC transporter amino acid-binding protein [Vibrio sinaloensis DSM 21326] gi|323319193|gb|EGA72134.1| amino acid ABC transporter amino acid-binding protein [Vibrio sinaloensis DSM 21326] Length = 278 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 82/250 (32%), Gaps = 16/250 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +K + L L + S + L I +RG L+ G++T V +A G+ GF++ Sbjct: 13 FKSAITAFLGL-AVALPSMAQETPNLDKINERGTLRVGMST-FVPWAMRNTQGELIGFEI 70 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L++ ++++P AL +++ D++ T R S + F Sbjct: 71 DVAKRLAADSGWK---VEFVPTAWDGIIPALLAQKFDVIIGGMSVTPER--SKSVLFSTP 125 Query: 122 TYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G +K+ S I + G T + F + F+ Sbjct: 126 YSHSGVQVAANKELAAGFSEFSDFDSRRVKIAARRGAFTVQVARETFPKAK----ILQFD 181 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + A + N + + +SK A A+ G+ + Sbjct: 182 DDAQAFQEVLNGNAHAVIASSPKPEHEAVKNADKL-FIPFSERLSKGNEAFAVRLGEDDK 240 Query: 238 YNIVSWTHYA 247 + A Sbjct: 241 KAFFNKWIQA 250 >gi|300312810|ref|YP_003776902.1| glutamine ABC transporter/signal transduction system periplasmic protein [Herbaspirillum seropedicae SmR1] gi|300075595|gb|ADJ64994.1| ABC-type glutamine transport/signal transduction system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 249 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 45/236 (19%), Positives = 78/236 (33%), Gaps = 21/236 (8%) Query: 1 MYKDFFVSILC-LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M F + L+ L S A L +T V F N + GF Sbjct: 1 MKLPFAKLVFASLVALSVVGASARAET---------LVVACDTAFVPFEFKDRN-QYVGF 50 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D A++ I + P++ ALQ+K +D+ R+ + F Sbjct: 51 DIDLWDAIAKDIG---VTYKLQPMDFNGIIPALQTKNVDVALAGITIKDERKKV--IDFS 105 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I SV+ L+G ++ V++GT+ FKA F + Sbjct: 106 DGYYDSGFSLMVPVGSSIKSVADLAGKALAVKSGTSAFDYAKANFKA----TELHQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + R DA D + T + ++ + +G Sbjct: 162 DNAYLELQTGRVDAAMHDTPNVLYYIATAGKGRA-KVVGTQMMAHQYGIGFPKGSP 216 >gi|296387616|ref|ZP_06877091.1| putative amino acid binding protein [Pseudomonas aeruginosa PAb1] Length = 263 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 79/226 (34%), Gaps = 13/226 (5%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 + G L+ GI F+ A G+ GFD D AL + + K Q++ Sbjct: 24 AVAADGSLRIGIEAAYPPFSFKTAEGELAGFDYDIGNALCAQM---QVKCQWIEQEYDGL 80 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147 +L+ ++ID + T R + F YF +M + + S SQL+G Sbjct: 81 IPSLKVRKIDAALSSITITEERRR--SVDFTHKYYFTPGRLVMKEGAQLDDSFSQLAGKR 138 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 I VQ G T + + + + +EI A R DA D L L Sbjct: 139 IGVQRGATADRFASAVLAKAG--AEVVRYTSQDEIYLDLVAGRLDATFADSIPLQTGFLD 196 Query: 208 NDRPSEHVIL-----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R + + A+ +GD E ++ A+ Sbjct: 197 TPRGKGYAFVGPEFKDPKYFGEGAGIAVRKGDAELVGKLNAAIDAI 242 >gi|256832193|ref|YP_003160920.1| extracellular solute-binding protein family 3 [Jonesia denitrificans DSM 20603] gi|256685724|gb|ACV08617.1| extracellular solute-binding protein family 3 [Jonesia denitrificans DSM 20603] Length = 258 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 93/260 (35%), Gaps = 20/260 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M + + L+ L T+ S+ S + + + L N F G+ Sbjct: 1 MNRTTAFTATALLALSMTACSSTQSTETESGIALVNQN-TLTVCTNPPFEPFEYKTDAGE 59 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G D+D +++ + + S ++ +A E +L+S Q DI++ T RE Sbjct: 60 IVGIDMDIMAEVATDLDLELSIVE-AAFDAMESGASLESNQCDIIATGMTITEEREE--R 116 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 +F Y QG ++ ++S+ L+G S+ VQ TT + + V Sbjct: 117 FSFSNPYYDANQGVLVTAGTTVASLEDLNGQSVAVQIETTGASLAEE------QGLNATV 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 FE + + A + DA D+ L E I + + + + Sbjct: 171 FEDLGLVVQAVATGQTDAAIADVGTLAPYVT-----DELTIGYIEQTDEQYGFGVKKTNP 225 Query: 236 EWYNIVSWTHYAMVTAEELG 255 E V+ T + + L Sbjct: 226 ELVTAVNNTLTRITESGRLE 245 >gi|254501487|ref|ZP_05113638.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia alexandrii DFL-11] gi|222437558|gb|EEE44237.1| Bacterial extracellular solute-binding protein, family 3 [Labrenzia alexandrii DFL-11] Length = 259 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 85/275 (30%), Gaps = 21/275 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGF 59 M S + + A +K G+ F A+G+W G+ Sbjct: 1 MKHMIKASFVATAVSVAAISGAQAQD---------VKVGVAAEPYPPFTSPDASGNWVGW 51 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +V+F A+ + P+ AL S +ID++ + T R + + F Sbjct: 52 EVEFMEAVCAEA---KLNCVITPVAWDGIIPALTSGKIDMIVGSMSITEERLKT--IDFS 106 Query: 120 PITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y I K + LSG + VQ T YF ++ Sbjct: 107 DKYYNTPTSIIGAKGDDFEATPEGLSGKILGVQVSTIHAAYADKYFAPA--ADDIKQYQT 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E + A R DA D AL A ++ + L + G + Sbjct: 165 QDEANQDLAAGRVDAVQADAIALDAFLKSDAGACCEYKGNVADDTAILGAGVGVGLRKGE 224 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 + + A + A T + SK + D+ Sbjct: 225 DELKEKINAAIAA---IRTNGTYEEFSKKYFDFDI 256 >gi|186476538|ref|YP_001858008.1| cationic amino acid ABC transporter periplasmic binding protein [Burkholderia phymatum STM815] gi|184192997|gb|ACC70962.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia phymatum STM815] Length = 265 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 87/246 (35%), Gaps = 20/246 (8%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F GD +GFD+D A+ + + +K ++ + ALQ Sbjct: 31 KEIRFGVEASYAPFESKSPAGDLQGFDIDIGNAVCAKL---KTKCVWVENSFDGLIPALQ 87 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152 +++ ++ + T R + F Y I K G+ + + L G + V Sbjct: 88 ARKFSAINSDMSITDQRRAV--IDFTDPIYVIPNQMIAKKGSGLQPTPASLKGKHVGVLQ 145 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT E + + + ++ +++ A A R DA D A L + + Sbjct: 146 GTIQETYAKAKWAPAGVD--VVPYQTQDQVYADLVAGRLDASFQDAEAASKGFLKKPQGA 203 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 +S L + +GD + + V+ EL I++++ Sbjct: 204 GFEFAGPAVSDEKLLGSGVGFGLRKGDAQLKDAVNQALK------ELKADGT-IDKLAAK 256 Query: 268 TTNPDV 273 + V Sbjct: 257 YFDVKV 262 >gi|114705497|ref|ZP_01438400.1| hypothetical protein FP2506_13564 [Fulvimarina pelagi HTCC2506] gi|114538343|gb|EAU41464.1| hypothetical protein FP2506_13564 [Fulvimarina pelagi HTCC2506] Length = 292 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 86/246 (34%), Gaps = 19/246 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ F + S L G N G V + NG+ GF+ Sbjct: 29 MIRQSLFALTFATAGFAVTPSLAE----------MLTAGANVGNVPWEFQDENGEITGFE 78 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ + ++S + D + + F A+QS +ID+ + T R ++F Sbjct: 79 VELLQEVASRL--DYEGVDIQNIPFNGLFSAVQSGRIDVAISSITITDER--LQSVSFAQ 134 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y Q GISS L G ++ V G+T ++ ++ + +E + Sbjct: 135 PYYDSDQSLSTRTDSGISSTQDLEGKTVGVDTGSTGDMYASEREADWGLAG-ISRYEGLN 193 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A R DAY DI A+ + ++ + + + + D+E Sbjct: 194 PAMLDLAAGRIDAYVSDIPAVAYY---LRDKPDMEVVERLKTGEQYSMMFAK-DSELAAK 249 Query: 241 VSWTHY 246 + Sbjct: 250 ANEVLT 255 >gi|325519349|gb|EGC98773.1| basic amino acid ABC transporter, periplasmic basic amino acid-binding protein [Burkholderia sp. TJI49] Length = 265 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 83/251 (33%), Gaps = 19/251 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDV 61 K ++LCL L + + + G L+ G+ F G W GF+ Sbjct: 2 KRVLRTLLCLFSLVVAALAPLGAAQA---SSGVLRFGVAAEPYPPFLMKSPTGQWSGFEA 58 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D RAL + +K + ++ AL S +ID++ + T R+ + F Sbjct: 59 DLIRALCEQM---KAKCEIKEVSWDGIIPALLSDKIDVIFNSMSITPERQKVIA--FSRP 113 Query: 122 TYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y F+ K ++ L G I VQ T + A+ ++ + Sbjct: 114 YYETPGTFVGAKNARLTLTPDGLKGKVIGVQGSTANAEFIK---MAYGKTATVRLYNTQD 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQGD 234 + +A A R D D + T D + + P + P + + + D Sbjct: 171 DCNADLVAGRIDTMYLDQLGILDFLKTKDGSAFELKGPGSVKMDPAIFGYGVGAGMRKAD 230 Query: 235 TEWYNIVSWTH 245 + Sbjct: 231 APLKQQMDQAL 241 >gi|323492219|ref|ZP_08097377.1| ABC transporter: Substrate binding protein precursor [Vibrio brasiliensis LMG 20546] gi|323313532|gb|EGA66638.1| ABC transporter: Substrate binding protein precursor [Vibrio brasiliensis LMG 20546] Length = 279 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 83/251 (33%), Gaps = 17/251 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K F +I L+ L + S + L I +RG L+ G++T V +A GD GF+ Sbjct: 12 KGFKAAITALLGLAISLPSLASDTPNLDKINERGTLRVGMST-FVPWAMRDKQGDLIGFE 70 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L++ ++++P AL +++ D++ T R + F Sbjct: 71 IDVANRLAADSGWK---VEFVPTAWDGIIPALLAQKFDVIIGGMSITPERAK--SVLFTS 125 Query: 121 ITYFDGQGFIMHKKKGIS----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 G +K+ S I + G T + F + F Sbjct: 126 PYSHSGVQVAANKELAEGFSQLSDFDSRRVKIAARRGAFTVQVARETFPKAK----ILQF 181 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + A + N + D +SK A A+ G+++ Sbjct: 182 DDDAQAFQEVLNGNAHAVIASSPKPEHETVKNSDKL-FIPFTDRLSKGNEAFAVRLGESD 240 Query: 237 WYNIVSWTHYA 247 + A Sbjct: 241 KEAFFNSWIQA 251 >gi|302538461|ref|ZP_07290803.1| glutamine-binding periplasmic protein [Streptomyces sp. C] gi|302447356|gb|EFL19172.1| glutamine-binding periplasmic protein [Streptomyces sp. C] Length = 482 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 80/220 (36%), Gaps = 12/220 (5%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 + ++G L + F + NG GFDV ++ + + KI P + Sbjct: 249 KVVEKGKLTTCTHLPYPPFQFEQ-NGKVVGFDVALIDLVAKKLEVE-QKILDTPFENFKT 306 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GA 146 L S Q D+ + T R+ + F + Q + KK GI+S++ L Sbjct: 307 GAFLNSGQCDLAAAGMTITDERKK--NVDFSVPYFDATQALLATKKSGITSLADLKAKNK 364 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + QA TT E A ++P+ FE + + R + DA D + Sbjct: 365 KLGAQAETTGESY------AKAQGFNPVAFESSDAVLNGLRTGQVDAVVIDYPVVQGWLK 418 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 +E V+ +I + ++ +G+T + Sbjct: 419 DPKNSAEFVLGQNIETGEKYGFSVKKGNTALLAAIDKAVT 458 >gi|295838853|ref|ZP_06825786.1| amino acid ABC transporter, amino acid-binding protein [Streptomyces sp. SPB74] gi|295827222|gb|EDY42336.2| amino acid ABC transporter, amino acid-binding protein [Streptomyces sp. SPB74] Length = 347 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 86/251 (34%), Gaps = 29/251 (11%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQ 79 + + + + IK+RG L G++ +A G + +GFD+D R ++ I K++ Sbjct: 64 AKDGAAIAAIKERGELLVGVDQNSYRWAYRGTYGSEPEGFDIDLARRVAKEILGAADKVR 123 Query: 80 YLPLNAKERFLALQSKQ---------------IDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ +R AL + +D++ T R IS +AF + Sbjct: 124 FKTVSTADRGPALGRDEKDKGKPLAERDAKASVDMIISTMSITC-RHISNDIAFSTPYFE 182 Query: 125 DGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 Q ++ + + L G+ +C G+T E LA + A+ +K + Sbjct: 183 TRQTLVVPRDSPVKGFGPTLGGSRLCAATGSTAEAFLARHGGAYGLKP-VTKVPSQLDCL 241 Query: 184 AAYRAHRCDAYTGDISALYALKLTND-------RPSEHVILPDIISKSPLAPAIIQGDTE 236 + D D + + + + LP A+ + Sbjct: 242 VRLQLGTVDGLVTDGALAASQLAQDPGVRIADENEGDAARLP---MPEFYGVAMRDDSPD 298 Query: 237 WYNIVSWTHYA 247 V+ Sbjct: 299 LVGRVNQILDG 309 >gi|237507558|ref|ZP_04520273.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei MSHR346] gi|234999763|gb|EEP49187.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei MSHR346] Length = 250 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 94/283 (33%), Gaps = 39/283 (13%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + F +I+ L ++ ++ +A L G +T + F + + + GFD+ Sbjct: 3 RRSFIKTIVALALVGASAAGAHA---------KELVVGTDTSFMPFEFKQGD-KYVGFDL 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + P++ ALQ++ ID+ R + F Sbjct: 53 DLWAAIAK---GAGWTYKVQPMDFAGLIPALQTQNIDVALSGMTIKEERRK--AIDFSDP 107 Query: 122 TYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + I S+ L+G I + GT T D+ KAH F ++ Sbjct: 108 YYDSGLAAMVQANNTTIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A R DA D + + + +S +G Sbjct: 164 QAYLALEAGRVDAAMHDTPNVLFFVNNEGKGRA-KVAGAPVSGDKYGIGFPKGSP----- 217 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKS 282 A V AE + ++ D + +++ G + Sbjct: 218 ----LVAKVNAE--------LARMKADGRYAKIYKKWFGSEPP 248 >gi|148974814|ref|ZP_01811794.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrionales bacterium SWAT-3] gi|145965323|gb|EDK30572.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrionales bacterium SWAT-3] Length = 269 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 83/253 (32%), Gaps = 18/253 (7%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++L L + + ++ L I +RG L+ G++T V +A GD G Sbjct: 1 MKLFKTAITALLAL-AVSLPALASETPNLDKINERGSLRVGMST-FVPWAMRNKQGDLVG 58 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F++D + L+ ++++P +L S + D++ T R + F Sbjct: 59 FEIDVAKRLAEDSGWK---VEFVPTAWDGIIPSLLSNKFDVIIGGMSITEARAK--SVLF 113 Query: 119 RPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 G +K+ S I + G T + F + Sbjct: 114 TEPYSHSGVQLAANKELAEGFSKVSDFDSRRVKIAARRGAFTVQVARETFPKAK----VL 169 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F+ + A + N + + + +SK A A+ G+ Sbjct: 170 QFDDDAQAFQEVLNGNAHAVIASSPKPEHEAIKNAE-TLFIPFDERLSKGNEAFAVRLGE 228 Query: 235 TEWYNIVSWTHYA 247 T+ + A Sbjct: 229 TDKAEFFNEWIKA 241 >gi|134280328|ref|ZP_01767039.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei 305] gi|217420515|ref|ZP_03452020.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei 576] gi|134248335|gb|EBA48418.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei 305] gi|217395927|gb|EEC35944.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei 576] Length = 315 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 68/223 (30%), Gaps = 13/223 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 +L +K+ G LK + F +G +GFDVD + +++ + P Q++ Sbjct: 77 DLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDVDVAKEVAARLGVKP---QFVTTE 133 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQ 142 LQ+ + D++ T R L F + I + Sbjct: 134 WSGILAGLQAGKFDVIVNQVGITPAR--RQALDFSQPYVYSAAQLIQRADDKHDYGAPGA 191 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G I V GT AD K + E A R D D L Sbjct: 192 LQGKRIGVTLGT----NFADLAKTLQ-GVDVKTYPGAPEKLRDVAAGRIDVSMDDRLMLP 246 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L P ++ + +G+ ++ + Sbjct: 247 YLIKNAHMPLR-PGATINGGETQMGIPFRKGNPKFAKALDDAL 288 >gi|126440682|ref|YP_001060016.1| polar amino acid ABC transporter periplasmic amino acid-binding protein [Burkholderia pseudomallei 668] gi|254191837|ref|ZP_04898340.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|126220175|gb|ABN83681.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei 668] gi|157939508|gb|EDO95178.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei Pasteur 52237] Length = 315 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 68/223 (30%), Gaps = 13/223 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 +L +K+ G LK + F +G +GFDVD + +++ + P Q++ Sbjct: 77 DLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDVDVAKEVAARLGVKP---QFVTTE 133 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQ 142 LQ+ + D++ T R L F + I + Sbjct: 134 WSGILAGLQAGKFDVIVNQVGITPAR--RQALDFSQPYVYSAAQLIQRADDKHDYGAPGA 191 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G I V GT AD K + E A R D D L Sbjct: 192 LQGKRIGVTLGT----NFADLAKTLQ-GVDVKTYPGAPEKLRDVAAGRIDVSMDDRLMLP 246 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L P ++ + +G+ ++ + Sbjct: 247 YLIKNAHMPLR-PGATINGGETQMGIPFRKGNPKFAKALDDAL 288 >gi|324993471|gb|EGC25391.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK405] gi|327458834|gb|EGF05182.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1057] Length = 287 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 84/246 (34%), Gaps = 9/246 (3%) Query: 2 YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K + S+ + + + +S ++ ++ G F+ +G G+D Sbjct: 16 KKTLKYFSLAAVSVFAIGALVACSSSSEKKTEKTKVEVGTVGTTKPFSYEDKDGKLTGYD 75 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ RA+ D ++ + F L S + I + N E + + Sbjct: 76 IEVLRAIFKD--SDKYEVNFNKTKWASIFSGLDSDRYQIGANNIS--YSEERANKYLYAS 131 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-- 178 + ++ K + I S+ + G S V GT+T L DY K H+ I + Sbjct: 132 PYAKNPTVLVVRKGEDIKSLDDIGGKSTEVVQGTSTAQQLEDYNKEHSDNPTKINYTDGT 191 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237 +++I + R D + + + + ++ + P I G + Sbjct: 192 IQQILSNLNDGRTDYKIFER-ITVESIIKDQGLNNLEVIELPSDQQPYVYPIIASGQEDL 250 Query: 238 YNIVSW 243 V+ Sbjct: 251 QKFVNK 256 >gi|300868202|ref|ZP_07112834.1| Polar amino acid ABC transporter, inner membrane subunit [Oscillatoria sp. PCC 6506] gi|300333826|emb|CBN58018.1| Polar amino acid ABC transporter, inner membrane subunit [Oscillatoria sp. PCC 6506] Length = 478 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 25/207 (12%), Positives = 67/207 (32%), Gaps = 18/207 (8%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK---ANGDWKGFDVDF 63 + + + + ++ + L + + + + GFDVD Sbjct: 1 MVVAIAVAFSLIAIASYSQT-----ANKTLTMATSPDYPPYEFKDTAVSGNEIIGFDVDI 55 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + ++ + I ++ ALQ+ + D + T R+ + F + Y Sbjct: 56 AKYITKELGYQFQIIG---MDFNGLIPALQAGRADFVMAGMTPTPERKK--NVDFSDLYY 110 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 + +K ++ L+G + VQ G+ + + + ++ +I Sbjct: 111 EAQNTIVANKGSKLTKPEDLAGKKVGVQLGSIQQEAVKKMA-----GVEVVSLNKIADII 165 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDR 210 +++R A + + +N Sbjct: 166 QEVKSNRLTAGIIEDTVAKGYAESNPD 192 >gi|15964316|ref|NP_384669.1| putative periplasmic binding ABC transporter protein [Sinorhizobium meliloti 1021] gi|307307052|ref|ZP_07586791.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] gi|15073493|emb|CAC45135.1| Putative periplasmic binding ABC transporter [Sinorhizobium meliloti 1021] gi|306901992|gb|EFN32591.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] Length = 260 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 90/245 (36%), Gaps = 21/245 (8%) Query: 36 LKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 +K GI F A+G+W+G++++F +A+ + D P+ AL S Sbjct: 27 VKVGIAAEPYPPFTSPDASGNWEGWEIEFMKAMCAEAKLD---CVVTPVAWDGIIPALTS 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153 K+ID++ + T R + + F Y G I K I + L+G +I VQ Sbjct: 84 KKIDMIIGSMSITAERLKT--IDFSDKYYNTPTGIIGAKGDDIKPTPEGLAGKTIGVQVS 141 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 T + +F ++ +E + A R DA D AL A ++ Sbjct: 142 TVHQAYAMKHFAPAG--VEVKEYQTQDEANQDLAAGRVDAVQADAIALDAFLKSDQGKQC 199 Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 ++ + + +G+TE V+ A+ + SK Sbjct: 200 CDYKGEVAEDVDVIGPGVGVGLRKGETELKEKVNAAIKAIRE-------NGTYDAFSKKY 252 Query: 269 TNPDV 273 + D+ Sbjct: 253 FDFDI 257 >gi|323492179|ref|ZP_08097337.1| lysine-arginine-ornithine-binding periplasmic protein [Vibrio brasiliensis LMG 20546] gi|323313492|gb|EGA66598.1| lysine-arginine-ornithine-binding periplasmic protein [Vibrio brasiliensis LMG 20546] Length = 257 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 79/251 (31%), Gaps = 26/251 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +I C L T ++ + F + NG GFD Sbjct: 1 MNK-MLSAIACAATLLATPVVA-----------KEVRLASDFTYPPFNYMDTNGKPVGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ AL + K ++ +L +++ D++ + T R+ + F Sbjct: 49 IEIADALCAEA---QLKCTWVSQAWDSLIPSLLARKSDVIMASMRITEERKK--RILFTN 103 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y F+ I+ + S++ G I VQ+GT + + D F + Sbjct: 104 KYYQTPARFVAKTGSDIALTQSEMKGKVIGVQSGTIHDRYVTDKF---GDVAEIKRYSGQ 160 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +E+ R D G+ L L + + ++ A A+ Q D Sbjct: 161 DEVYIDMNNGRLDVTFGNSDQLALAFLDKEIGQGFEFIGKPVTDKAYIGEGTALALRQQD 220 Query: 235 TEWYNIVSWTH 245 + Sbjct: 221 KALAEKFNQAI 231 >gi|261821247|ref|YP_003259353.1| cationic amino acid ABC transporter periplasmic protein [Pectobacterium wasabiae WPP163] gi|261605260|gb|ACX87746.1| cationic amino acid ABC transporter, periplasmic binding protein [Pectobacterium wasabiae WPP163] Length = 243 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 79/248 (31%), Gaps = 25/248 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K I+ + + A ++ F V AN +GFD Sbjct: 1 MKK----LIVAALFAAGAVSANAADT---------IRFATEASYPPFEFVDANNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + L+ ++ + + D T R ++F Sbjct: 48 IDLANALCKEM---QANCTFSNQAFDSLIPGLKFRRFEAVIAGMDITPER--QQQVSFSQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K ++ V+ L+G + VQ GTT + L + + ++ + Sbjct: 103 PYYDNAALFIAQKG-KVADVAALTGKRVGVQNGTTHQKYL----MEKHSDIKTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + N+ + L A+ Q + E Sbjct: 158 NAVLDLKNGRLDAVFGDTAVVNEWLKQNNTLASVGESVTDKGYFGIGLGIAVRQNNDELL 217 Query: 239 NIVSWTHY 246 + Sbjct: 218 KKFNDALN 225 >gi|309390082|gb|ADO77962.1| amino acid ABC transporter substrate-binding protein, PAAT family [Halanaerobium praevalens DSM 2228] Length = 244 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 85/246 (34%), Gaps = 21/246 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L +L +S G N F V+A G+ GFD Sbjct: 1 MKKTLVTILVVLTVLTLSSGVMAQ----------RYVVGTNASFPPFEYVEA-GEIVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ ++++ L+ L S +D+++ + R+ ++F Sbjct: 50 IDIVKAIAD---LQGFEVEFRDLSFDSLVPGLASGSLDLVAAGMTISEQRKKV--VSFSE 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179 Y Q ++H+ I VQ GTT + + + ++ ++ Sbjct: 105 PYYSANQSVLVHQDSEEDLTVLFGDNDIGVQTGTTGDAWVRNKLIKADILTGEIRNYDSF 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + DA D A + + P ++ ++I+ A+ + + E Sbjct: 165 VFVIRDLANKNIDAAVLDKP--VAETYSKNNPV--KVVAEVITGEEYGIAVSKNNEELRQ 220 Query: 240 IVSWTH 245 ++ Sbjct: 221 KLNEGL 226 >gi|22125502|ref|NP_668925.1| histidine-binding periplasmic protein of high-affinity histidine transport system [Yersinia pestis KIM 10] gi|45442179|ref|NP_993718.1| histidine-binding periplasmic protein of high-affinity histidine transport system [Yersinia pestis biovar Microtus str. 91001] gi|21958398|gb|AAM85176.1|AE013763_10 histidine-binding periplasmic protein of high-affinity histidine transport system [Yersinia pestis KIM 10] gi|45437043|gb|AAS62595.1| histidine-binding periplasmic protein of high-affinity histidine transport system [Yersinia pestis biovar Microtus str. 91001] Length = 351 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 86/246 (34%), Gaps = 20/246 (8%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 +K G + F ++G+ GFD+D + L I +K ++ + +L+ Sbjct: 117 KEIKIGTDPTYAPFESKNSSGELVGFDIDIAKELCKRI---DTKCTFVESDFDALIPSLK 173 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQA 152 +K++D + + T R+ + F + I K I ++ L G + V Sbjct: 174 AKKVDAIISSLSITEKRQKEIA--FTDKLFAANSRLIAAKGSTIEPTLVALKGKRVGVLQ 231 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T E ++ + + ++ + I A + R DA D A L Sbjct: 232 GSTQEAFANAEWQPKGID--VVAYQNQDLIYADLASGRIDAAFQDEVAASEGFLKQPVGK 289 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 +++ + + + D E ++ AE +Q +K Sbjct: 290 DYIFAGPSVKNDQFFGVGTGMGLRKADVELKEALNKAF-----AEMRN--DGTYDQFAKK 342 Query: 268 TTNPDV 273 + DV Sbjct: 343 YFDFDV 348 >gi|313498470|gb|ADR59836.1| Extracellular solute-binding protein [Pseudomonas putida BIRD-1] Length = 250 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 72/213 (33%), Gaps = 8/213 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ F V A+ GFDVD AL + + + + + AL + Sbjct: 23 TLRFATEGAYPPFNYVDADNKLHGFDVDITHALCEQMKVE---CTLVAQDWEGIIPALMA 79 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS-QLSGASICVQAG 153 ++ D + + T R +AF Y + K I S G ++ Q+ Sbjct: 80 RKYDAVVASMIDTEERRK--KIAFTEHYYRTPLTVAVAKDSKIDSAQTDFVGYTVGAQSS 137 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T + D + ++ ++E +A A R D D L+ N Sbjct: 138 STQAIYAEDVYGKAGAD--VKLYPTMDEANADLAAGRLDGVIADKFPLHEWMNKNGGDCC 195 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 ++ +K+ A A+ + D ++ Sbjct: 196 KILGDVADTKADAAIAVRKDDEALRQRLNTALQ 228 >gi|298290193|ref|YP_003692132.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296926704|gb|ADH87513.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 266 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 18/254 (7%) Query: 1 MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + + ++ S NA L +K G L F+ +G Sbjct: 1 MRLNLLPVLAAALVGGLVTGGLSAPANAQQLELVK-PGALLVATEGTYPPFSMRTPDGQL 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G ++ + ++ + + + + L + Q D S D T R+ + Sbjct: 60 DGLEIRVAKEIARRLNLTYEPVVIK---WEALLVGLAADQYDFASAAMDITAERQK--QV 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G + K I + + + G ++ V +T + + + Sbjct: 115 MFADGWLESGGRVVTQKGSPIKTPADIKGKTVGVLVSSTWQKLAEE------RGATVKAY 168 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + DA D A + P V++ D +S +G Sbjct: 169 KAESDAIQDLVNGQIDAVITDSIAAAYAIEASKLP--LVMVDDYLSHIQKGFPFKKGKPN 226 Query: 237 WYNIVSWTHYAMVT 250 V+ M+ Sbjct: 227 LVKAVNKALADMIA 240 >gi|85058514|ref|YP_454216.1| amino-acid ABC transporter periplasmic component [Sodalis glossinidius str. 'morsitans'] gi|84779034|dbj|BAE73811.1| amino-acid ABC transporter periplasmic component [Sodalis glossinidius str. 'morsitans'] Length = 256 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 71/246 (28%), Gaps = 14/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + F + + A L IK G + G + GFD Sbjct: 1 MKKITL-ALLFSTLAFTAAQAVAADDLAAIKSSGTITFGTEGTYAPYTFHDEIDKLVGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RA++ + +++ L K+ D + T R+ F Sbjct: 60 VDLGRAVAQKLGVKA---KFIEGRWDGLIAGLDGKRYDAVINQVGITPERQA--KYDFSK 114 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I I + S L G Q+ T+ LA + A + + Sbjct: 115 PYIDSKVVLITRDDNTTIKNFSDLKGQKSA-QSLTSNYSQLASKYGA-----DIVPTDSF 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R A D + K V + + P + + T + Sbjct: 169 TQSIGLVITGRAAATFNDNLSFLDFKKHQPNVKVKVAASEPANA-PSGILVRKNQTALVD 227 Query: 240 IVSWTH 245 ++ Sbjct: 228 AINKAL 233 >gi|156977166|ref|YP_001448072.1| ABC amino acid transporter periplasmic ligand binding protein [Vibrio harveyi ATCC BAA-1116] gi|156528760|gb|ABU73845.1| hypothetical protein VIBHAR_05952 [Vibrio harveyi ATCC BAA-1116] Length = 272 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 85/251 (33%), Gaps = 11/251 (4%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K ++L L I + + A+ + IK+RG L+ G++T V +A G+ Sbjct: 1 MKLFKATITALLGLAIALPSLANEEAATSNVEQIKERGTLRVGMST-FVPWAMRNKQGEL 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GF++D + L++ K++++P AL +K+ D++ T R S + Sbjct: 60 IGFEIDVAKRLAADSG---LKVEFVPTAWDGIIPALLAKKFDVIIGGMSITPER--SKSV 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G +K+ S V+ + K + F Sbjct: 115 LFTEPYSHSGVQVAANKELAEGFSEFSDFNSRRVKIAARRGAFTVQVARETFPKAKILQF 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + A + + + + +SK A A+ G+ + Sbjct: 175 DDDAQAFQEVLNGNAHAVIASSPRPEHEAIEHADKL-FIPFSERLSKGNEAFAVRLGEED 233 Query: 237 WYNIVSWTHYA 247 + A Sbjct: 234 KKAFFNQWIEA 244 >gi|261250663|ref|ZP_05943238.1| cyclohexadienyl dehydratase [Vibrio orientalis CIP 102891] gi|260939232|gb|EEX95219.1| cyclohexadienyl dehydratase [Vibrio orientalis CIP 102891] Length = 258 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 77/245 (31%), Gaps = 14/245 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K L + +L + + S L +I +G L+ G ++GF Sbjct: 1 MKKLML--ALGMTLLAMANVANAESRLHEILDKGVLRVGTTGDWNPMTMKDPATNSYRGF 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D L+ + ++Y+ + K +Q+ + D ++ + + R G + Sbjct: 59 DIDVTTELAKDLGVK---VEYVATDWKTLVSGIQADKYD-ITGSASLNMSRAKVAGYSQP 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSG--ASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 S S + GT E + +F + IV E Sbjct: 115 YFYLAFVPVVQKKDLAKFSDWSDFDNADIKVAATLGTVQEKMVKAFFPSAQH----IVIE 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A R D L + V + + +P+A + Q D W Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVEKFKQ-LAIVPVKEPRKPTPIAMLLDQDDQVW 229 Query: 238 YNIVS 242 N ++ Sbjct: 230 INYIN 234 >gi|186473023|ref|YP_001860365.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184195355|gb|ACC73319.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 257 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 85/249 (34%), Gaps = 20/249 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + L +F+ + ++ GI+ +G KGFD Sbjct: 1 MKTPLILLLAALGFACHGAFA---------RDNDTIRLGIDPTYPPMDAKAPDGSLKGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + I ++ +++ L ALQ+++ID + + T RE + F Sbjct: 52 VDLGNEICKRI---RARCEWVELEFSGMIPALQARKIDAIMSSMAITAKREE--QILFSS 106 Query: 121 ITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + + G++ + L+G I VQ GT E ++ H + ++ Sbjct: 107 KLFQFNSRLVAKQGSGLNGSAPATLAGKQIGVQTGTQFESFAQSHWAPAG--VHVVAYKG 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI--ISKSPLAPAIIQGDTE 236 +E+ + R D L + + + + + + + + +T Sbjct: 165 QDEVFSDLVNGRLDGALLGTVEADYGFLRTPQGKGYSFVGEPLDMGDRGVGIGMRKDETA 224 Query: 237 WYNIVSWTH 245 ++ Sbjct: 225 LQTSINTAI 233 >gi|261251728|ref|ZP_05944302.1| amino acid ABC transporter amino acid-binding protein [Vibrio orientalis CIP 102891] gi|260938601|gb|EEX94589.1| amino acid ABC transporter amino acid-binding protein [Vibrio orientalis CIP 102891] Length = 279 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 82/255 (32%), Gaps = 21/255 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K F +I L+ L + S + L I RG L+ G++T V +A GD GF+ Sbjct: 12 KRFKATITALLGLAISLPSIASETPNLDKINDRGTLRVGMST-FVPWAMRDRQGDLIGFE 70 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + L+ ++++P AL +++ D++ T R + F Sbjct: 71 IDVAKRLAKDSGWK---VEFVPTAWDGIIPALLAQKFDVIIGGMSITPERAK--SVLFTS 125 Query: 121 ITYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 G +K+ S I + G T + F + F Sbjct: 126 PYSHSGVQIAANKELASGFSEFSDFDSRRIKIAARRGAHTVQVARETFPKAK----ILQF 181 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + A + N + + +SK A A+ G+ + Sbjct: 182 DDDAQAFQEVLNGNAHAVIASSPKPEHETVKNSDKL-FIPFTERLSKGNEAFAVRLGEAD 240 Query: 237 WYNIVSWTHYAMVTA 251 A + A Sbjct: 241 KEAF----FNAWIQA 251 >gi|260462847|ref|ZP_05811052.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|259031491|gb|EEW32762.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] Length = 266 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 93/252 (36%), Gaps = 23/252 (9%) Query: 30 IKKRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 + K +K G+ F A+G W G++++F A+ + D P+ Sbjct: 21 VAKADPVKIGVAAEPYPPFTSPDASGKWVGWEIEFIDAVCAEEKLD---CVITPVAWDGI 77 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS-VSQLSGAS 147 AL +K+ID++ + T RE + + F Y I K + S L G Sbjct: 78 IPALTTKKIDLIVSSMSITAEREKT--IDFSDKYYNTPTAIIGPKDQKFGSTPEDLKGKV 135 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + VQ T + +F A ++ +E + A R DA D S L Sbjct: 136 VGVQVSTVHAVYAKKHFGA--TASEIKEYQTQDEANNDLAAGRLDAVQAD-SIALGEFLK 192 Query: 208 NDRPSE-----HVILPDIISKSP-LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 +D+ ++ PD P + + + DT+ ++ A+ + Sbjct: 193 SDQGKACCDLKGMVAPDDEVLGPGVGAGVRKEDTDLKEKINAGIKAIRANGKY------- 245 Query: 262 NQVSKDTTNPDV 273 +++SK + D+ Sbjct: 246 DEISKKYFDFDI 257 >gi|169342350|ref|ZP_02863417.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens C str. JGS1495] gi|182625722|ref|ZP_02953490.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens D str. JGS1721] gi|169299575|gb|EDS81638.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens C str. JGS1495] gi|177908984|gb|EDT71466.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens D str. JGS1721] Length = 278 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 96/291 (32%), Gaps = 32/291 (10%) Query: 1 MYKDFF-----VSILCLIILFFTSFST-------NASILGDIKKRGFLKCGINTGLVGFA 48 M K+ F V+++ + L ++ + IK+ G L G++ + Sbjct: 1 MKKNIFKKILSVAMIGGLTLSLAGCGAKTAKENGSSDKVAKIKESGKLVVGLSADYAPYE 60 Query: 49 E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 G D+D + ++ + D ++ + ++++ ID+ Sbjct: 61 FHIMKDGKDQIVGLDIDIAKEVAKNLGVD---LEIKEMEFGAIIQSVKNGMIDMGISG-- 115 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADY 163 T + + F I Y QG +++K I + L G + Q G+ Sbjct: 116 ITPDEKRKEAVDFSDIYYEAEQGILINKDNKESIKGIGDLKGKKVGAQMGSIQAEI---- 171 Query: 164 FKAHNMKYHPIVFERV-EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 A+ ++ + + + + DA ++ A + V I + Sbjct: 172 --ANGIEGADVKLLDNVNTLILELKTGKLDAVITELP--VAKIASEVNSELAVADEVIKN 227 Query: 223 KS-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 A AI +G+ + + V+ T + ++ + ++ + Sbjct: 228 SEGGSAIAIQKGNKDLVDEVNSTIKELKENGKIDQFTNDAIELVPYQKKEE 278 >gi|1943541|pdb|1GGG|A Chain A, Glutamine Binding Protein Open Ligand-Free Structure gi|1943542|pdb|1GGG|B Chain B, Glutamine Binding Protein Open Ligand-Free Structure gi|3212630|pdb|1WDN|A Chain A, Glutamine-Binding Protein Length = 226 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 76/216 (35%), Gaps = 12/216 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 L +T V F + + + GFDVD A++ + D P++ A Sbjct: 1 ADKKLVVATDTAFVPFEFKQGDL-YVGFDVDLWAAIAKELKLDYE---LKPMDFSGIIPA 56 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150 LQ+K +D+ T R+ + F Y G ++ + SV L G + V Sbjct: 57 LQTKNVDLALAGITITDERKK--AIDFSDGYYKSGLLVMVKANNNDVKSVKDLDGKVVAV 114 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++GT + DY KA+ F ++ +R DA D + T Sbjct: 115 KSGTGSV----DYAKANIKTKDLRQFPNIDNAYMELGTNRADAVLHDTPNILYFIKTAGN 170 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + D + A +G E + V+ Sbjct: 171 G-QFKAVGDSLEAQQYGIAFPKGSDELRDKVNGALK 205 >gi|322385751|ref|ZP_08059395.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus cristatus ATCC 51100] gi|321270489|gb|EFX53405.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus cristatus ATCC 51100] Length = 282 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 70/223 (31%), Gaps = 8/223 (3%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 +++ + G + V + +G + GFD+D A+ K+++ P++ Sbjct: 32 DNWSKYEEKKQITIGFDNTFVPMGFEQKDGTYAGFDIDLANAVFEEYG---IKVKWQPID 88 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + L + ID++ T R + F + Q + K IS S + Sbjct: 89 WDMKETELTNGTIDLIWNGYSATDER--REKVEFTIPYMKNEQVLVSKKSSHISQASDMV 146 Query: 145 GASICVQAGTTTELTLA---DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 G + QAG++ + + K + ++ E + R D D Sbjct: 147 GKVLGAQAGSSGYVAFESNPEILKTIVKNHTATQYQSFNEALIDLQNDRIDGLLIDRVYA 206 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 ++ + A + D V+ Sbjct: 207 NYYLTEEGILDQYSVFSVGFESEDFAVGARKADRTLVEKVNAA 249 >gi|311071034|ref|YP_003975957.1| putative ABC transporter binding lipoprotein [Bacillus atrophaeus 1942] gi|310871551|gb|ADP35026.1| putative ABC transporter (binding lipoprotein) [Bacillus atrophaeus 1942] Length = 264 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 80/248 (32%), Gaps = 16/248 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L+ + + N+ D K L G FA +G GFD Sbjct: 3 MKKWTLLFVAALLAVLSACGNGNSR---DNKDDKVLHVGATGQSYPFAYK-EDGKLTGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A++ + K+ + L LQ+ ++D +S T R+ F Sbjct: 59 VEVMEAVAKKL---DMKLDWKLLEFSGLMGELQTGKLDTISNQVAVTDERKEV--YNFTE 113 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G ++ I SV L G ++ G+ L + + +E Sbjct: 114 PYSYAGTQIVVKDDNKDIKSVDDLKGKTVAAVLGSNHAKNLESKDPDKKI--NIKTYETQ 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD--TEW 237 E R DAY S L A P + D I +A + D + Sbjct: 172 EGTLKDVAYGRVDAYVNSRSVLLAQIKKTGLP--LKLAGDPIVYEQVAFPFAKDDAHDKI 229 Query: 238 YNIVSWTH 245 V+ Sbjct: 230 RKKVNKAL 237 >gi|13474337|ref|NP_105905.1| amino acid ABC transporter, binding protein [Mesorhizobium loti MAFF303099] gi|14025090|dbj|BAB51691.1| amino acid ABC transporter, binding protein [Mesorhizobium loti MAFF303099] Length = 265 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 94/252 (37%), Gaps = 23/252 (9%) Query: 30 IKKRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 + K +K G+ F A+G W G+++DF A+ + D P+ Sbjct: 21 VAKADPVKIGVAAEPYPPFTSPDASGKWVGWEIDFIDAVCAEEKLD---CVITPVAWDGI 77 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGAS 147 AL +K+ID++ + T R+ + + F Y I K + ++ L G Sbjct: 78 IPALTTKKIDLIVSSMSITDERKKT--IDFSDKYYNTPTAIIGPKDQKFGATPDDLKGKV 135 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + VQ T + +F + ++ +E + A R DA D S L Sbjct: 136 VGVQVSTVHAVYAKKHFGS--TASEIKEYQTQDEANQDLAAGRLDAVQAD-SIALGEFLK 192 Query: 208 NDRPSE-----HVILPDIISKSP-LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 +D+ ++ PD P + + + DT+ ++ A+ + Sbjct: 193 SDQGKACCDLKGMVAPDDEVLGPGVGAGVRKEDTDLKEKINAGIKAI-------RSNGKY 245 Query: 262 NQVSKDTTNPDV 273 +++SK + D+ Sbjct: 246 DEISKKYFDFDI 257 >gi|229514205|ref|ZP_04403666.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholerae TMA 21] gi|229348185|gb|EEO13143.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholerae TMA 21] Length = 256 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 83/260 (31%), Gaps = 31/260 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L+ + +K + F + N +GFD Sbjct: 14 MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + AL+ K+ D D T R + F Sbjct: 61 VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ ++ + L G + VQ G+T + L + + + + Sbjct: 116 PYYDNSAAFVSLAG-KVADQAALKGKRVGVQNGSTHQSFLLEEL----SDVVAVPYSSYQ 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + + R D+ GD + + + + + ++ + A+ + + Sbjct: 171 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQ 227 Query: 236 EWYNIVSWTHYAMVTAEELG 255 + ++ A+ E Sbjct: 228 ALLDQLNAALEAVKENGEYA 247 >gi|251788345|ref|YP_003003066.1| Prephenate dehydratase [Dickeya zeae Ech1591] gi|247536966|gb|ACT05587.1| Prephenate dehydratase [Dickeya zeae Ech1591] Length = 255 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 82/257 (31%), Gaps = 15/257 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + +L L + AS L +++RG LK + ++A+ D++G D Sbjct: 1 MKKRFSLMLL----LGLAGSAGAASHLDQVQERGVLKVCTTGDYKPYTSLRADSDYEGID 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + R+L+ ++ ++++ + K QS Q DI TL R+ + Sbjct: 57 IAMARSLAKSLGVK---VEWVKTSWKTLMPDFQSGQCDIAMGGISVTLERQKKAVFSNTL 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIVFER 178 K +V Q++ S+ V T E + Y + Sbjct: 114 DVDGKIPLVRCDDKDKYQTVEQINQPSVRVIEPAGGTNEAFVHAYLPKA-----SLALHD 168 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I + D D S + + + A + + D W Sbjct: 169 NVTIFQQLVDKQADVMITDASEALYQQKRYPQLCAVNPASPMQYGE-KAYMLPRDDMSWK 227 Query: 239 NIVSWTHYAMVTAEELG 255 V + + E Sbjct: 228 LYVDQWLHLSKSTGEYR 244 >gi|226313306|ref|YP_002773200.1| arginine ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] gi|226096254|dbj|BAH44696.1| arginine ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] Length = 268 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 81/268 (30%), Gaps = 22/268 (8%) Query: 1 MY--KDF----FVSILCLIILFFTSFSTNASILGDIK----KRGFLKCGINTGLVGFAEV 50 M K F S+L +++ + + L + + Sbjct: 1 MKNTKSFISLALTSMLAAVVIAGCGTGNQTATGQAPAPSAGDKKTLVMVTSADYKPYEYH 60 Query: 51 K---ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 + GFD+D + ++ + + +Q +N ALQ+ + D + T Sbjct: 61 DLSSGKDEIVGFDIDIAKYIAKELGYE---LQINDMNFDGLIPALQTNRADFVMAGMTAT 117 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 RE F I Y + K ++ QL+G + VQ G+ E + K Sbjct: 118 PEREK--NADFSTIYYDAKNTIVAKKDSNLTKPEQLAGKKVAVQLGSIQEGAARELAKTV 175 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 ++ EI +A R DA + + S + K+ A Sbjct: 176 -SGLQITSLNKLPEIVEEVKAGRVDAAIIEDTVAKGFVAN--NDSLQFTTMEENEKNGSA 232 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG 255 A +G + M E+ Sbjct: 233 VAFPKGSPHVQKF-NEVIKKMQENGEMD 259 >gi|330960460|gb|EGH60720.1| arginine/ornithine ABC transporter periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 258 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 51/246 (20%), Positives = 81/246 (32%), Gaps = 25/246 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L +L F+ LK GI FA +G GFD Sbjct: 1 MKKLMLIGALALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + K ++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M + S+++L G I VQ G+ E + + P + Sbjct: 106 KYYNSPARLVMKDGTTVSDSLAELKGKKIGVQRGSIHERFAREVLAPQGVVVTP--YGSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233 EI A R D D + L L D + + P + A+ +G Sbjct: 164 NEIYLDIGAGRLDGTIADATLLQDGFLKTDAGKGYAFVG-PSFADPKYFGDGIGIAVRKG 222 Query: 234 DTEWYN 239 D + Sbjct: 223 DKANLD 228 >gi|153832969|ref|ZP_01985636.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio harveyi HY01] gi|148870690|gb|EDL69596.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio harveyi HY01] Length = 272 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 86/255 (33%), Gaps = 19/255 (7%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K ++L L I + + A+ + IK+ G L+ G++T V +A G+ Sbjct: 1 MKLFKATITALLGLAIALPSLANEEAATPNVDQIKEHGTLRVGMST-FVPWAMRNKQGEL 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GF++D + L++ K++++P AL +K+ D++ T R S + Sbjct: 60 IGFEIDVAKRLAADSG---LKVEFVPTAWDGIIPALLAKKFDVIIGGMSITPER--SKSV 114 Query: 117 AFRPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F G +K+ S I + G T + F Sbjct: 115 LFTEPYSHSGVQVAANKELAEGFSEFSDFDSRRVKIAARRGAFTVQVARETFPKAK---- 170 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + F+ + A + + + + +SK A A+ Sbjct: 171 ILQFDDDAQAFQEVLNGNAHAVIASSPKPEHEAIKHADKL-FIPFSERLSKGNEAFAVRL 229 Query: 233 GDTEWYNIVSWTHYA 247 G+ + + A Sbjct: 230 GEEDKKAFFNQWIEA 244 >gi|330431658|gb|AEC16717.1| glutamine ABC transporter periplasmic protein [Gallibacterium anatis UMN179] Length = 240 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 83/259 (32%), Gaps = 33/259 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S+ LF + + NA + + F G+ GFD Sbjct: 1 MKKVLLASL-----LFGAAVAANAQT---------ITFAMEPTYPPFENTNEKGEIVGFD 46 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ I D ++ + L+ K+ D D T R ++F Sbjct: 47 VDVANAICKEIKAD---CKFSSQSFDSLIAGLKFKRFDAAISAIDITPERAK--QVSFSD 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y F+ K+ + ++ VQ GTT + +A K +Y + ++ Sbjct: 102 PYYDSSASFVAAKEGITLENA----KNVGVQNGTTFQQYIAAKAK----QYSSKPYSTLQ 153 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + L + H + + L A+ + +TE Sbjct: 154 NAILDLKNGRIDIIFGDTAVLAEWI--KSDKAVHFVGDKVTDPEYFGTGLGIAVNKKNTE 211 Query: 237 WYNIVSWTHYAMVTAEELG 255 ++ A+ E Sbjct: 212 LLGQLNQGLKAIKANGEYQ 230 >gi|327469096|gb|EGF14568.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK330] gi|328945645|gb|EGG39796.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1087] Length = 287 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 86/246 (34%), Gaps = 9/246 (3%) Query: 2 YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K + S+ + +L + +S ++ ++ G F+ +G G+D Sbjct: 16 KKTLKYFSLAAVSVLAIGALVACSSSSEKKTEKIKVEVGTVGTTKPFSYEDKDGKLTGYD 75 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ RA+ D ++ + F L S + I + N E + + Sbjct: 76 IEVLRAIFKD--SDKYEVNFNKTKWASIFSGLDSDRYQIGANNIS--YSEERANKYLYAS 131 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-- 178 + ++ K +GI S+ + G S V GT+T L DY K H+ K I + Sbjct: 132 PYAKNPTVLVVRKGEGIKSLDDIGGKSTEVVQGTSTAQQLEDYNKEHSDKPTKINYTDGT 191 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237 +++I A R D + + + ++ + P I G + Sbjct: 192 IQQILANLNDGRTDYKIFER-ITVESIIKDQGLDNLEVIELPSDQQPYVYPIIASGQEDL 250 Query: 238 YNIVSW 243 V+ Sbjct: 251 QKFVNK 256 >gi|237806948|ref|YP_002891388.1| extracellular solute-binding protein family 3 [Tolumonas auensis DSM 9187] gi|237499209|gb|ACQ91802.1| extracellular solute-binding protein family 3 [Tolumonas auensis DSM 9187] Length = 277 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 78/261 (29%), Gaps = 21/261 (8%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 YK +L + + S L IK+RG L ++ ++ + + G DV Sbjct: 4 YKTLQTLLLLAGSVTISHASVAGETLDRIKERGELIGVMDQAYPPYSFLNDKNEMDGMDV 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + + + + + + DI + R L F Sbjct: 64 DLTKEFARRLGVKA---KIETPAWEVTTAGNWRGRWDICICSMTPDAQRAR--SLDFVTH 118 Query: 122 TYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + ++ ++ + G I Q G + E L K P+ + Sbjct: 119 YYSSPAVLVTSVNGNPLTKLADMEGKKIAAQQGGSYERYLNQTLKMEGYGAKPVTYPFKA 178 Query: 181 EIDAAYRA-------------HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 Y + R D ++ P + I+ + + + P Sbjct: 179 VQVMPYGSEDLEYQDLSLGAGKRIDGLVSNLVTANERISKM--PGKFKIVGEPLFEDPNW 236 Query: 228 PAIIQGDTEWYNIVSWTHYAM 248 AI +GD EW + V M Sbjct: 237 VAIDKGDKEWRDTVVKIFDDM 257 >gi|313668733|ref|YP_004049017.1| amino acid permease substrate-binding protein [Neisseria lactamica ST-640] gi|313006195|emb|CBN87657.1| putative amino acid permease substrate-binding protein [Neisseria lactamica 020-06] Length = 275 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 67/224 (29%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKRGFLKCGINTGLVG 46 M + F + + ++L + + S++ I +G + G Sbjct: 2 MLEKFVLGGIAALVLAACGGSEGGSGASSAPAQSAVSGSLIERINNKGTVTVGTEGTYAP 61 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 62 FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 118 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + I S++ + G + KA Sbjct: 119 T-SPERQATFDKSDPYSWSGAVLVARNDSNIKSIADIKGVKTAQSLTSNYGE------KA 171 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 172 KAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215 >gi|269797422|ref|YP_003311322.1| extracellular solute-binding protein family 3 [Veillonella parvula DSM 2008] gi|269094051|gb|ACZ24042.1| extracellular solute-binding protein family 3 [Veillonella parvula DSM 2008] Length = 261 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 94/321 (29%), Gaps = 67/321 (20%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59 M ++L + + + + + G + F +G GF Sbjct: 1 MKFKKIAALLGAFTIASSLLIAGCG--KEGNSQKAWRVGTDATYAPFGFKDKDSGKLAGF 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D A+++ + LN ALQS IDI + + R + F Sbjct: 59 DIDIINAIANEEGIEAD---IQNLNFDALLPALQSNTIDIAISDMTISEERAK--SVDFS 113 Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G G +++ I+S L G I V G+T + A +++ IV Sbjct: 114 KPYYIAGNGLVVNIDNTNINSFKDLEGKRIGVSIGSTGAEIASKIPNADVRQFNIIV--- 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + D D + + + +PL A+ +G+TE Sbjct: 171 --DAFLELQNKGVDVVINDTPVNEYYVNGKGKGIA-KVTGEDYDAAPLGIAVKKGNTELL 227 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298 N ++ GL K Sbjct: 228 NKIND----------------------------------------------GLAK----- 236 Query: 299 IIRHMGNYGEMFDRNLGNQSE 319 I+ G Y E++ + G + Sbjct: 237 -IKANGKYAEIYKKWFGKEPP 256 >gi|229815592|ref|ZP_04445919.1| hypothetical protein COLINT_02643 [Collinsella intestinalis DSM 13280] gi|229808822|gb|EEP44597.1| hypothetical protein COLINT_02643 [Collinsella intestinalis DSM 13280] Length = 276 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 93/269 (34%), Gaps = 36/269 (13%) Query: 1 MYKDFF-VSILCLIILFFTSFSTNASILG----------------DIKKRGFLKCGINTG 43 M K F + L I + + + G G + Sbjct: 1 MKKKLFGATAATLAIAGALALVGCGGSQDPAAGSAAGKAGDDAAYTLVEDGTFTIGTSAE 60 Query: 44 LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK-QIDILSR 102 F + +G++KGFD++ ++ + D + + ++ A+ S ++D Sbjct: 61 YEPFEYM-EDGEYKGFDLELAELIADDLDLD---FEIVNMDFDGLCAAVASGTKMDAAFG 116 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKK------KGISSVSQLSGASICVQAGTTT 156 T RE + F Y D Q + K + + G I VQ+G+T Sbjct: 117 AITITPKREK--QVDFTDSYYMDDQAIVTMKDNADITGDNYADALNVEGVKIAVQSGSTA 174 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 E+ + + F + F+ + AA ++++ A + S A +LT + Sbjct: 175 EVFVNENFPEA----TAVPFKNATDCFAALQSNQAVALVTNRS--VAAQLTASSFDNEQV 228 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + I + A A+ + + + ++ T Sbjct: 229 IKLISTGEEYAIAVSKDNPGLKDAINETL 257 >gi|262041414|ref|ZP_06014617.1| histidine ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041208|gb|EEW42276.1| histidine ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 258 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 33/258 (12%), Positives = 80/258 (31%), Gaps = 25/258 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + + ++ G++ F G GFD Sbjct: 1 MKKSLLLWLALMASTSALAEGG-----------KEIRFGVDPTFAPFEWKDPQGKLAGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +K ++ N AL++++ D + T R+ + F Sbjct: 50 IDLGNAICQQL---QAKCVWVESNFDGIIPALKARKFDAILSGMYMTEKRKAQIA--FSD 104 Query: 121 I-TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ QL G +I V+ G+ E + +++ + + + ++ Sbjct: 105 KLYNGPVFLVARKNTLQGNTPEQLKGKTIDVEQGSAQETYVNQHWRPQGI--NIVAYQGA 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + + D L + E + + L A + + D Sbjct: 163 DSVVRDLESGSIDGAVLSGMMADYSFLQQPQGKEFAFVGGHLQDDTLFGAGAAIGLRKDD 222 Query: 235 TEWYNIVSWTHYAMVTAE 252 ++ A + A+ Sbjct: 223 EALRQEINGAI-AKILAD 239 >gi|157963211|ref|YP_001503245.1| extracellular solute-binding protein [Shewanella pealeana ATCC 700345] gi|157848211|gb|ABV88710.1| extracellular solute-binding protein family 3 [Shewanella pealeana ATCC 700345] Length = 245 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 80/250 (32%), Gaps = 28/250 (11%) Query: 1 MYKDFFV--SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANG-DW 56 M K V S+ L T K L G N F V A+G + Sbjct: 1 MKKSVLVVASLGLTGALMLTGCG---------KSDDVLVVGTNASFPPFEYVGGASGDEI 51 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D + ++ ++ +N +AL + ++D ++ T R+ + Sbjct: 52 MGFDIDLAKQIAKDAGK---TLKVENMNFDSLIVALNAGKVDFIASGMTITPERQA--SV 106 Query: 117 AFR-PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F P + I+S+ L G I VQ G+T + A + Sbjct: 107 DFSEPYYEATQMVLVNKDNNSINSLDDLKGKHIAVQLGSTGD------IMAKSYSQQVTA 160 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F E + + D D ++ + ++ S A+ + Sbjct: 161 FNSGFEAVMELKNAKVDLVLFD---SEPAISFLEKNPQLKMVELDFSPEFYGFAVAKDKV 217 Query: 236 EWYNIVSWTH 245 E N ++ + Sbjct: 218 ELLNSINSSL 227 >gi|300742153|ref|ZP_07072174.1| putative amino acid ABC transporter [Rothia dentocariosa M567] gi|300381338|gb|EFJ77900.1| putative amino acid ABC transporter [Rothia dentocariosa M567] Length = 294 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 78/223 (34%), Gaps = 11/223 (4%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 G L NT + F + NG G D D A++ + + + L Sbjct: 61 NGVLTVCTNTPYMPFEY-EENGKIVGIDADIANAIAKDLGAEAQLTSISF-EGLDSGTGL 118 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152 S Q DI T R+ + F + + D Q ++ K ISSV L A + Q Sbjct: 119 TSGQCDIALAGISVTDERKS--KMEFTDVYFEDNQAILVPKNSKISSVEDLKNAKVGAQQ 176 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 T+ E + + +E E + +A + + A + ++S + + S Sbjct: 177 ATSGESYAKE------KGADVVQYEDNELMFSALKTGQVQAVSANLSVISEALTKDPD-S 229 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + +A A+ + + T + ++ EL Sbjct: 230 FKIAYQTSENADQIAGAVAPEKKALLDKANKTIQQLKSSGELD 272 >gi|297517483|ref|ZP_06935869.1| glutamine ABC transporter periplasmic protein [Escherichia coli OP50] Length = 195 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 72/211 (34%), Gaps = 19/211 (9%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + L F S A L +T V F + + + GFDVD Sbjct: 2 KSVLKVSLAALTLAFAVSSHAAD--------KKLVVATDTAFVPFEFKQGD-KYVGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + D P++ ALQ+K +D+ T R+ + F Sbjct: 53 LWAAIAKELKLDYE---LKPMDFSGIIPALQTKNVDLALAGITITDERKK--AIDFSDGY 107 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y G ++ + SV L G + V++GT + DY KA+ F ++ Sbjct: 108 YKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSV----DYAKANIKTKDLRQFPNIDN 163 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 +R DA D + T Sbjct: 164 AYMELGTNRADAVLHDTPNILYFIKTAGNGQ 194 >gi|295115438|emb|CBL36285.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SM4/1] Length = 300 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 76/210 (36%), Gaps = 14/210 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G N + + G DV+ A+ + D +Q + AL S Sbjct: 85 LIMGTNATFPPYEYYDGD-AIVGIDVEIAEAIGEKLGMD---VQVEDMEFDALIPALVSD 140 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 ++D ++ T RE + F Q I+ + I+SV L+G + VQ GTT Sbjct: 141 KVDFVAAGMTVTPDREA--SVNFTDTYATAAQVIIVKEGSDIASVDDLAGKVVGVQLGTT 198 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 +L +++ + + E + + DA D K + V Sbjct: 199 GDLLVSEI-----EGTTVERYNKGFEAVQSVTQGKIDAVVIDN---APAKNFVAQGEGLV 250 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 IL + +S A A+ + +TE ++ Sbjct: 251 ILEEALSSEDYAMAVNKDNTELLEQINGAI 280 >gi|194436225|ref|ZP_03068327.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli 101-1] gi|194424953|gb|EDX40938.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia coli 101-1] gi|323961382|gb|EGB56993.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H489] gi|323973107|gb|EGB68300.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli TA007] Length = 260 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 88/244 (36%), Gaps = 20/244 (8%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ G + F + G+ GFD+D + L I ++ ++ +L++K Sbjct: 28 IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKAK 84 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154 +ID + + T R +AF Y ++ K I +V L G + V GT Sbjct: 85 KIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGT 142 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T E +++ + + ++ + I + A R DA D A L ++ Sbjct: 143 TQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDY 200 Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + L + D E ++ +A + A+ +++K Sbjct: 201 KFGGPSVKDEKLFGVGTGMGLRTEDNELREALNKA-FAEMRAD------GTYEKLAKKYF 253 Query: 270 NPDV 273 + DV Sbjct: 254 DFDV 257 >gi|254425157|ref|ZP_05038875.1| Bacterial extracellular solute-binding protein, family 3 [Synechococcus sp. PCC 7335] gi|196192646|gb|EDX87610.1| Bacterial extracellular solute-binding protein, family 3 [Synechococcus sp. PCC 7335] Length = 263 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 80/248 (32%), Gaps = 14/248 (5%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGFDVD 62 F S + I + D G G F V +G+ +GFD+D Sbjct: 8 TFLKSAVLAICTAGLLVACGGGGGEDASDGGDVFSVGTEPAFPPFESVGDDGELQGFDID 67 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 RA+ +++ L ALQ ID T R + + F Sbjct: 68 LMRAIGEKAGK---TVEFESLPFDGLIPALQGASIDAAISGMTITEER--ADTVDFSDPY 122 Query: 123 YFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + G + I+++ L G I VQ GTT T A +A F+ Sbjct: 123 FKAGLAIAVAEGDTEINTLDDLEGKRIAVQIGTTGAETAAGVPEA-----EVSTFDSAPL 177 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 DA D A T + P ++ +++++ A+ +G + V Sbjct: 178 ALQELANGNVDAVVNDAPATLDAIATGNIPG-ITVVGELLTEEFYGIAMPKGSED-VETV 235 Query: 242 SWTHYAMV 249 + ++ Sbjct: 236 NTALSELI 243 >gi|163789533|ref|ZP_02183971.1| hypothetical protein CAT7_08825 [Carnobacterium sp. AT7] gi|159875065|gb|EDP69131.1| hypothetical protein CAT7_08825 [Carnobacterium sp. AT7] Length = 483 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 90/298 (30%), Gaps = 26/298 (8%) Query: 2 YKDFF----VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K F +L +I + +A G + F A+G++K Sbjct: 5 KKSLFTIMTALLLTVIFTILLPTTASAQETDK-----TYIIGTDITFAPFEYKDADGEYK 59 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DVD A++ PL AL++ Q+D + T R Sbjct: 60 GIDVDLLEAIAKDQGFKYE---LRPLGFSAALQALETNQVDGMIAGMSITPER--QDSFD 114 Query: 118 FRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G + I+S L G ++ ++ GTT + + + F Sbjct: 115 FSEPYFESGVVMAVSADNDDITSYEDLEGKTVAIKVGTTGAAFAESIQEEYGFNVN--TF 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E + + DA D + + + I D A+ +G + Sbjct: 173 EDSANMYEDVQTGNSDAAFEDYPVMAYAIQS---GLKLKIPTDPEPGDNYGFAVNKG--Q 227 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF----LGIDKSSNIGEALG 290 ++ + ++ G ++ +T+ + L + + LG Sbjct: 228 NAELLEMFNNGLINIRANGTYDDILDTYLGETSQTETANLGFFGLIQQNGGELLKGLG 285 >gi|160894718|ref|ZP_02075493.1| hypothetical protein CLOL250_02269 [Clostridium sp. L2-50] gi|156863652|gb|EDO57083.1| hypothetical protein CLOL250_02269 [Clostridium sp. L2-50] Length = 317 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 84/251 (33%), Gaps = 21/251 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K + ++ ++ L S L +K++G G+ T +G Sbjct: 55 MKKLVALVLVAVMGLSMVGCGKKDSSNDSKSDLEYVKEKGTFVVGV-TDFAPMDYKDDSG 113 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 +W GFD D A + +I ++ ++ + + L K ID + T E++ Sbjct: 114 NWIGFDADMASAFAESIGVKAE---FVEIDWDNKIMELDGKTIDCVWNGMTLTD--EVTS 168 Query: 115 GLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 +A + Q I+ K +V + + V+AG+ E D K + Y Sbjct: 169 SMACSDAYCNNAQVVIVPQDKADQYQTVDSIKELTFAVEAGSAGE----DQAKELGLNYT 224 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + + + A DA D S + A + ++ ++ + Sbjct: 225 AVKAQS--DALMEVAAGTSDAAIID-SLMAAAMVGEGTGYANLTYTVGLNSEEYGVGFRK 281 Query: 233 GDTEWYNIVSW 243 + + Sbjct: 282 DSDLAAELNKF 292 >gi|186472615|ref|YP_001859957.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia phymatum STM815] gi|184194947|gb|ACC72911.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia phymatum STM815] Length = 260 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 80/225 (35%), Gaps = 13/225 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K ++ G++ F ++G GFD+D + + + +K ++ + Sbjct: 23 KDWTTIRFGVDASYPPFESKGSDGKLTGFDIDIGNEICARL---KAKCVWVENDFDGMIP 79 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149 AL++K+ D + + T R + F + + K I + LSG S+ Sbjct: 80 ALKAKKFDGVLSSMSMTPQRAEQIA--FSSKLFNTPTRLVAKKGSNILPTAESLSGKSVG 137 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ GT E Y++ + ++ +++ A + R DA D L Sbjct: 138 VEQGTIQETYAKTYWEPKG--AKVVPYQNQDQVYADLISGRLDAALQDAVQADIGFLKTP 195 Query: 210 RPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAMV 249 R + + + + + + DT+ + ++ Sbjct: 196 RGAGYQFVGKDLEDKKILGEGAGIGMRKEDTDLKAKIDKAIADII 240 >gi|107022264|ref|YP_620591.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116689209|ref|YP_834832.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105892453|gb|ABF75618.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116647298|gb|ABK07939.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 264 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 74/219 (33%), Gaps = 13/219 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F +G GFD+D A+ + + +K ++ + ALQ Sbjct: 30 KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KTKCVWVENDFDGLIPALQ 86 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152 +++ D ++ + T R+ +AF Y I + G + + L G + V Sbjct: 87 ARKFDAINSDMTITEQRK--HAIAFTDPIYTIPNQLIAKQGSGLLPTPQSLKGKRVGVLQ 144 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT E + + ++ + A ++ R DA D A LT + Sbjct: 145 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGSKGFLTKPQGQ 202 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246 +S + + + + D + Sbjct: 203 GFAFAGGTVSDTEILGSGVGFGLRKNDAALKTALDQALK 241 >gi|327473463|gb|EGF18883.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK408] Length = 287 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 86/246 (34%), Gaps = 9/246 (3%) Query: 2 YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K + S+ + +L + +S ++ ++ G F+ +G G+D Sbjct: 16 KKTLKYFSLAAVSVLAIGALVACSSSSEKKTEKIKVEVGTVGTTKPFSYEDKDGKLTGYD 75 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ RA+ D ++ + F L S + I + N E + + Sbjct: 76 IEVLRAIFKD--SDKYEVNFNKTKWASIFSGLDSDRYQIGANNIS--YSEERANKYLYAS 131 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-- 178 + ++ K +GI S+ + G S V GT+T L DY K H+ I + Sbjct: 132 PYAKNPTVLVVRKGEGIKSLDDIGGKSTEVVQGTSTAQQLEDYNKEHSDNPTKINYTDGT 191 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237 +++I A R D + + + + ++ + P I G + Sbjct: 192 IQQILANLNDGRTDYKVFER-ITVESIIKDQGLNNLEVIELPSDQQPYVYPIIASGQEDL 250 Query: 238 YNIVSW 243 V+ Sbjct: 251 QKFVNK 256 >gi|281355807|ref|ZP_06242301.1| extracellular solute-binding protein family 3 [Victivallis vadensis ATCC BAA-548] gi|281318687|gb|EFB02707.1| extracellular solute-binding protein family 3 [Victivallis vadensis ATCC BAA-548] Length = 242 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 47/242 (19%), Positives = 78/242 (32%), Gaps = 22/242 (9%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F ++ +L S + L + + + G DVD Sbjct: 5 RFLKTLGAAAVLGAVLCSCG-------RSDNKLVMVAEATFPPYEFREGD-RIVGIDVDI 56 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 ++ I + + ++ A+QS + D+ + T R+ + F Sbjct: 57 MTEVAREIGKE---LVVEDMSFDSVISAVQSGKADVAASGITVTEDRKR--QIDFSVPYV 111 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 Q I+ I L G I VQ GTT + + P F Sbjct: 112 EARQVIIVPGNSAIKGRDDLKGKRIGVQHGTTGDAYVTKNI------QEPERFPNGALAV 165 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 AA A + D D K+ DR +ILP+ ++ A AI +G+TE V+ Sbjct: 166 AALNAGKIDVIVID---GEPAKIFADRHKNLLILPEPLTVEEYAIAIRKGNTELLEQVNR 222 Query: 244 TH 245 Sbjct: 223 VI 224 >gi|295681128|ref|YP_003609702.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295441023|gb|ADG20191.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 260 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 94/279 (33%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L+ + S K+ ++ G++ F A+G GFD Sbjct: 1 MKAMLATLTIALLAVSSASAIA--------KEWSTVRFGVDASYPPFESKAADGKLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + +K ++ + AL+ ++ D + T R+ +G F Sbjct: 53 IDLGNEICRRL---NAKCVWIENSFDGMIPALKGRKFDGVLSTMSMTPARQAQIG--FSS 107 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K I + L G I V+ G+ E Y++ + ++ Sbjct: 108 KVFRIPTRLVAKKGSPIEPTPEALKGRRIGVEQGSIQETYAKTYWQPAG--AVIVPYQDQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGD 234 + + + A R DA + L R + + + + A + + D Sbjct: 166 DLVYSDLLAGRIDASLQNAVQADIGFLRTSRGKDFGFAGNPLYDAKTLGSGTAIGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 T+ + A + A+ ++++K + DV Sbjct: 226 TDLQEKIDKAI-ADIRAD------GTYDRIAKKYFDFDV 257 >gi|53723354|ref|YP_112339.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei K96243] gi|76818697|ref|YP_336644.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei 1710b] gi|126457176|ref|YP_001077187.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei 1106a] gi|134281791|ref|ZP_01768498.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 305] gi|167725482|ref|ZP_02408718.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei DM98] gi|167821597|ref|ZP_02453277.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei 91] gi|167829941|ref|ZP_02461412.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei 9] gi|167851398|ref|ZP_02476906.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei B7210] gi|167900040|ref|ZP_02487441.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei 7894] gi|167908343|ref|ZP_02495548.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei NCTC 13177] gi|167916697|ref|ZP_02503788.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei 112] gi|167924542|ref|ZP_02511633.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei BCC215] gi|226199303|ref|ZP_03794863.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei Pakistan 9] gi|242313028|ref|ZP_04812045.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 1106b] gi|254182414|ref|ZP_04889008.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 1655] gi|254186971|ref|ZP_04893486.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|254192568|ref|ZP_04899007.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei S13] gi|254265600|ref|ZP_04956465.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 1710a] gi|254296639|ref|ZP_04964095.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 406e] gi|52213768|emb|CAH39823.1| glutamine-binding periplasmic protein precursor [Burkholderia pseudomallei K96243] gi|76583170|gb|ABA52644.1| glutamine-binding periplasmic protein precursor [Burkholderia pseudomallei 1710b] gi|126230944|gb|ABN94357.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 1106a] gi|134246853|gb|EBA46940.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 305] gi|157806490|gb|EDO83660.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 406e] gi|157934654|gb|EDO90324.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|169649326|gb|EDS82019.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei S13] gi|184212949|gb|EDU09992.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 1655] gi|225928710|gb|EEH24737.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei Pakistan 9] gi|242136267|gb|EES22670.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 1106b] gi|254216602|gb|EET05987.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 1710a] Length = 250 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 94/283 (33%), Gaps = 39/283 (13%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + F +I+ L ++ ++ +A L G +T + F + + + GFD+ Sbjct: 3 RRSFIKTIVALALVGASAAGAHA---------KELVVGTDTSFMPFEFKQGD-KYVGFDL 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D ++ + P++ ALQ++ ID+ R + F Sbjct: 53 DLWAEIAK---GAGWTYKIQPMDFAGLIPALQTQNIDVALSGMTIKEERRK--AIDFSDP 107 Query: 122 TYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + I S+ L+G I + GT T D+ KAH F ++ Sbjct: 108 YYDSGLAAMVQANNTTIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A R DA + + N+ + +S +G Sbjct: 164 QAYLALEAGRVDA-AMHDTPNVLFFVNNEGKGRVKVAGAPVSGDKYGIGFPKGSP----- 217 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKS 282 A V AE + ++ D + +++ G + Sbjct: 218 ----LVAKVNAE--------LARMKADGRYAKIYKKWFGSEPP 248 >gi|51596929|ref|YP_071120.1| ABC tranporter, periplasmic histidine-binding protein hisJ [Yersinia pseudotuberculosis IP 32953] gi|108808063|ref|YP_651979.1| histidine-binding periplasmic protein [Yersinia pestis Antiqua] gi|108812335|ref|YP_648102.1| histidine-binding periplasmic protein [Yersinia pestis Nepal516] gi|145599265|ref|YP_001163341.1| histidine-binding periplasmic protein [Yersinia pestis Pestoides F] gi|153949723|ref|YP_001400407.1| histidine ABC transporter periplasmic protein [Yersinia pseudotuberculosis IP 31758] gi|165925274|ref|ZP_02221106.1| histidine ABC transporter, periplasmic histidine-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|166214211|ref|ZP_02240246.1| histidine ABC transporter, periplasmic histidine-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167399286|ref|ZP_02304810.1| histidine ABC transporter, periplasmic histidine-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167469031|ref|ZP_02333735.1| histidine-binding periplasmic protein of high-affinity histidine transport system [Yersinia pestis FV-1] gi|170023779|ref|YP_001720284.1| cationic amino acid ABC transporter periplasmic binding protein [Yersinia pseudotuberculosis YPIII] gi|186896009|ref|YP_001873121.1| cationic amino acid ABC transporter periplasmic binding protein [Yersinia pseudotuberculosis PB1/+] gi|229838346|ref|ZP_04458505.1| histidine-binding periplasmic protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895376|ref|ZP_04510549.1| histidine-binding periplasmic protein [Yersinia pestis Pestoides A] gi|229898912|ref|ZP_04514057.1| histidine-binding periplasmic protein [Yersinia pestis biovar Orientalis str. India 195] gi|229902688|ref|ZP_04517805.1| histidine-binding periplasmic protein [Yersinia pestis Nepal516] gi|51590211|emb|CAH21848.1| ABC tranporter, periplasmic histidine-binding protein hisJ [Yersinia pseudotuberculosis IP 32953] gi|108775983|gb|ABG18502.1| histidine-binding periplasmic protein [Yersinia pestis Nepal516] gi|108779976|gb|ABG14034.1| histidine-binding periplasmic protein [Yersinia pestis Antiqua] gi|145210961|gb|ABP40368.1| histidine-binding periplasmic protein [Yersinia pestis Pestoides F] gi|152961218|gb|ABS48679.1| histidine ABC transporter, periplasmic histidine-binding protein [Yersinia pseudotuberculosis IP 31758] gi|165922881|gb|EDR40032.1| histidine ABC transporter, periplasmic histidine-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|166204567|gb|EDR49047.1| histidine ABC transporter, periplasmic histidine-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167051790|gb|EDR63198.1| histidine ABC transporter, periplasmic histidine-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|169750313|gb|ACA67831.1| cationic amino acid ABC transporter, periplasmic binding protein [Yersinia pseudotuberculosis YPIII] gi|186699035|gb|ACC89664.1| cationic amino acid ABC transporter, periplasmic binding protein [Yersinia pseudotuberculosis PB1/+] gi|229680135|gb|EEO76234.1| histidine-binding periplasmic protein [Yersinia pestis Nepal516] gi|229688460|gb|EEO80531.1| histidine-binding periplasmic protein [Yersinia pestis biovar Orientalis str. India 195] gi|229694712|gb|EEO84759.1| histidine-binding periplasmic protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701684|gb|EEO89710.1| histidine-binding periplasmic protein [Yersinia pestis Pestoides A] gi|262366629|gb|ACY63186.1| histidine-binding periplasmic protein [Yersinia pestis D182038] gi|320014576|gb|ADV98147.1| histidine-binding periplasmic protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 260 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 86/246 (34%), Gaps = 20/246 (8%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 +K G + F ++G+ GFD+D + L I +K ++ + +L+ Sbjct: 26 KEIKIGTDPTYAPFESKNSSGELVGFDIDIAKELCKRI---DTKCTFVESDFDALIPSLK 82 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQA 152 +K++D + + T R+ + F + I K I ++ L G + V Sbjct: 83 AKKVDAIISSLSITEKRQKEIA--FTDKLFAANSRLIAAKGSTIEPTLVALKGKRVGVLQ 140 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T E ++ + + ++ + I A + R DA D A L Sbjct: 141 GSTQEAFANAEWQPKGID--VVAYQNQDLIYADLASGRIDAAFQDEVAASEGFLKQPVGK 198 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 +++ + + + D E ++ AE +Q +K Sbjct: 199 DYIFAGPSVKNDQFFGVGTGMGLRKADVELKEALNKAF-----AEMRN--DGTYDQFAKK 251 Query: 268 TTNPDV 273 + DV Sbjct: 252 YFDFDV 257 >gi|326318473|ref|YP_004236145.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375309|gb|ADX47578.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 300 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 86/232 (37%), Gaps = 9/232 (3%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFC 64 F +++ + + IK+ G L+ G F+ + +G +GFD Sbjct: 34 FDALVAQGPVASAETIAASPWASKIKQAGTLRLGGTQTSNLFSLLNEKDGRMRGFDAGIA 93 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + L+ I D SK+Q+ + + R L + Q+D + T R ++F Y Sbjct: 94 QLLTRYILGDASKVQFTQVTSSTREQVLVNGQVDTVIATYSITPARAE--KISFAGPYYT 151 Query: 125 DGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G ++ + I S + L G + QAG+T LA + F+ +E Sbjct: 152 SQAGVLVKANNQAIQSYNDLGGKKVATQAGSTGPAILAQFAPK----STVQEFQTHQEAL 207 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + R R AY D + L L+ + ++ P + +G Sbjct: 208 DSLRQGRVAAYVTDYTLLLNT-LSLGTGDAKLAGAPFGAQDPYGIGLPKGSD 258 >gi|288554809|ref|YP_003426744.1| putative ABC transporter binding lipoprotein [Bacillus pseudofirmus OF4] gi|288545969|gb|ADC49852.1| putative ABC transporter (binding lipoprotein) [Bacillus pseudofirmus OF4] Length = 295 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 37/271 (13%), Positives = 82/271 (30%), Gaps = 28/271 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI---------------------LGDIKKRGFLKCG 39 M K + ++IL + ++++ G L G Sbjct: 1 MKKLLSLMTALILILVLAACGATEDSEQDNEEVTDNEETTGESEDTSWTEVEESGKLVVG 60 Query: 40 INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 + + + GF+V+ + ++ + +I++ ++ +L++ QID+ Sbjct: 61 TSGTYAPITYYNESNELTGFEVELVKEVADKLG---LEIEFNTMDFDGILPSLRNGQIDV 117 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159 + + T R+ + + S + L G + + + T+ Sbjct: 118 AAHDFAITEERKETFDFVIPHKYSYGSVVVRAEDADRFSDANDLEGVDVALGSLTSNYAI 177 Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 AD A+ Y E I DAY D L V Sbjct: 178 FADNIGANGTAYD----GGTEAILRDVMNGNTDAYLNDRLVLQRTLDEFGDDRLVVADQV 233 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + A A+++G+T + ++ Sbjct: 234 KYHATESAMAVLKGNTALKEKLDEAVQELIE 264 >gi|326793481|ref|YP_004311301.1| ABC-type transporter periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] gi|326544245|gb|ADZ89465.1| ABC-type transporter, periplasmic subunit family 3 [Marinomonas mediterranea MMB-1] Length = 267 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 80/226 (35%), Gaps = 15/226 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M + + LI+ + + A +L DI+ R ++ + F V + Sbjct: 1 MKRLTQLLSKTLIVASSVAAAMTAMTAGADVLQDIQDRKEIRIAVPQDFPPFGSVGPDLK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +G DVD ++ + D ++ +P+ + R LQ+K++D++ + RE Sbjct: 61 PQGIDVDMANYIADQLDVD---LKIVPVTSANRIPYLQTKKVDLVISSLGKNPEREK--A 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G ++ ++ L+G ++ V G+ +L L Y + Sbjct: 116 IDFTTPYAPFFLGVFGESSVDVTKMADLAGKTVGVTRGSVEDLELEKYAPK---SLNVRR 172 Query: 176 FERVEEIDAAYRAHRCDAYTGDISAL--YALKLTNDRPSEHVILPD 219 FE AY + A + P +L D Sbjct: 173 FEDNNTTLTAYLTGQVKLIATGNLVATEIAKRQPQRAPETKFLLKD 218 >gi|313890875|ref|ZP_07824499.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus pseudoporcinus SPIN 20026] gi|313120773|gb|EFR43888.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus pseudoporcinus SPIN 20026] Length = 275 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 85/250 (34%), Gaps = 11/250 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K F+SI L+ L + N + + K+ + F+ + +G G+DV Sbjct: 5 KKVAFLSITALVALVLVACGHNKTTGTNGKE--TITFATVGTTAPFSY-EKSGHLTGYDV 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + +A+ D ++ + F L S + + N +T R F Sbjct: 62 EVAKAIFK--GSDKYQVNFKKTEWSSIFTGLDSSKYQMAGNNISYTKERAS--KYLFSYP 117 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE- 180 T ++ K I S + + S V GTTT L D+ K ++ + + Sbjct: 118 TGTTPSVLVVPKDSDIKSYADIKNHSTQVVQGTTTAAQLEDFNKKNSSAQVKLKYTNENI 177 Query: 181 -EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEWY 238 ++ + + D D + A + N +P + P Q + Sbjct: 178 TQMLSNLSEGKADFKIFDAPTVNA-IIKNQGLDNLKTIPLESKEQPYIYFIFSQDQKDLQ 236 Query: 239 NIVSWTHYAM 248 + V+ A+ Sbjct: 237 SFVNRRLKAL 246 >gi|206559452|ref|YP_002230213.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] gi|198035490|emb|CAR51368.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] Length = 264 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 74/219 (33%), Gaps = 13/219 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F +G GFD+D A+ + + +K ++ + ALQ Sbjct: 30 KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KTKCVWVENDFDGLIPALQ 86 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152 +++ D ++ + T R+ +AF Y I + G + + L G + V Sbjct: 87 ARKFDAINSDMTITDQRK--HAIAFTDPIYTIPNQLIAKQGSGLLPTPQSLKGKRVGVLQ 144 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT E + + ++ + A ++ R DA D A LT + Sbjct: 145 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGSKGFLTKPQGQ 202 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246 +S + + + + D + Sbjct: 203 GFAFAGGTVSDTEILGSGVGFGLRKNDAALKTALDQALK 241 >gi|330881451|gb|EGH15600.1| arginine/ornithine ABC transporter periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 258 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 77/246 (31%), Gaps = 25/246 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L +L F+ LK GI FA +G GFD Sbjct: 1 MKKLMLIGAMALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + K ++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M I S+++L G I VQ G+ E + + Sbjct: 106 KYYNSPARLVMKDGTVISDSLAELKGKKIGVQRGSIHERFAREVLAPKG--VEVTPYGSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233 EI A R D D + L L D + P + A+ +G Sbjct: 164 NEIYLDIGAGRLDGTIADATPLQDGFLKTDAGKGYAFTG-PSFTDPKYFGDGIGIAVRKG 222 Query: 234 DTEWYN 239 D Sbjct: 223 DKANLE 228 >gi|319762272|ref|YP_004126209.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gi|317116833|gb|ADU99321.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] Length = 300 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 86/235 (36%), Gaps = 15/235 (6%) Query: 9 ILCLIILFFTSFSTNASIL------GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61 L +A+ + IK+ G L+ G F+ + +G +GFD Sbjct: 31 AAAFDALVAQGPVADAATIRSSTWASKIKQAGTLRLGGTQTSNLFSLLNEKDGKIRGFDA 90 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + ++ I D +K ++ + + R L + Q+D++ T R ++F Sbjct: 91 GLAQLITRYILGDGAKYRFTQVTSSTREQVLINDQVDMVFATYSITPARAE--KISFAGP 148 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ I S + L+G + QAG+T LA Y F+ + Sbjct: 149 YYTSQAGVLVKANNKTIQSYNDLAGKKVATQAGSTGPAILAQYASKA----VVQEFQTHQ 204 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E A R R DAY D + L L+ + ++ P + +G Sbjct: 205 EALDALRQGRVDAYVTDYTLLL-NALSLGTGDARLAGAPFGAQDPYGVGLPKGSD 258 >gi|261364510|ref|ZP_05977393.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria mucosa ATCC 25996] gi|288567448|gb|EFC89008.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria mucosa ATCC 25996] Length = 274 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 64/224 (28%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTN--------------ASILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L S++ I +G + G Sbjct: 1 MLKKFVLGGMTALLLAACGGEGGSASSSAPAQSAGASGSLIERINNKGTITVGTEGTYAP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 61 FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + I S+ + G + KA Sbjct: 118 T-SPERQATFDKSEPYSWSGAVLVARNDSNIKSIDDIKGVKTAQSLTSNYGE------KA 170 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 171 KAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214 >gi|168217959|ref|ZP_02643584.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens NCTC 8239] gi|182380009|gb|EDT77488.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens NCTC 8239] Length = 278 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 40/290 (13%), Positives = 94/290 (32%), Gaps = 30/290 (10%) Query: 1 MYKDFF-----VSILCLIILFFTSFST-------NASILGDIKKRGFLKCGINTGLVGFA 48 M K+ F V+++ + L + + IK+ G L G++ + Sbjct: 1 MKKNIFKKILSVAMIGGLTLSLAGCGAKTAKENGSNDKVAKIKESGKLVVGLSADYAPYE 60 Query: 49 E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 G D+D + ++ + D ++ + ++++ ID+ Sbjct: 61 FHIMKDGKDQIVGLDIDIAKEVAKNLGVD---LEIKEMEFGAIIQSVKNGMIDMGISG-- 115 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADY 163 T + + F I Y QG +++K I + L G + Q G+ + Sbjct: 116 ITPDEKRKEAVDFSDIYYEAEQGILINKDNKESIKGIGDLKGKKVGAQMGS-----IQAE 170 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + + V + + + DA ++ A + V I + Sbjct: 171 IAKGIEGADVKLLDNVNTLILELKTGKLDAVITELP--VAKIASEVNSELAVADEVIKNS 228 Query: 224 S-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 A AI +G+ + + V+ T + ++ + ++ + Sbjct: 229 EGGSAIAIQKGNKDLVDEVNSTIKELKENGKIDQFTNDAIELVPYQKKEE 278 >gi|167587595|ref|ZP_02379983.1| extracellular solute-binding protein, family 3 [Burkholderia ubonensis Bu] Length = 264 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 75/219 (34%), Gaps = 13/219 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F +G GFD+D A+ + + +K ++ + ALQ Sbjct: 30 KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KAKCVWVENDFDGLIPALQ 86 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152 +++ D ++ + T R+ +AF Y I G+ + L G + V Sbjct: 87 ARKFDAINSDMTITEQRK--HAIAFTDPIYTIPNQLIAKAGSGLQPTPQSLKGKRVGVLQ 144 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT E + + + ++ + A ++ R DA D A L+ + + Sbjct: 145 GTIQESYAKKKWAPAGVD--VVPYQTQDLAYADLKSGRLDAAFQDSEAGAKGFLSKPQGA 202 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246 +S + + + + D + Sbjct: 203 GFAFAGGTVSDAEILGTGVGFGLRKNDAALKTALDQALK 241 >gi|315653694|ref|ZP_07906614.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners ATCC 55195] gi|315489056|gb|EFU78698.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners ATCC 55195] Length = 498 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 92/270 (34%), Gaps = 33/270 (12%) Query: 1 MYK----DFFVSILCL--IILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAE 49 M K ++ CL + F++ + A SIL IK + L G + Sbjct: 7 MKKCNLFKIIANLACLMTFLCLFSANAVAADHSSKSILTCIKNKKELVVGTSADYPPLEF 66 Query: 50 VK---ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + + G D++ + ++ + + ++ +AL+++++D++ Sbjct: 67 IDNQNGTNKYVGVDIELAKEIAKDLGVK---LVVKNMSFDSLLVALETRKVDMVISGLTP 123 Query: 107 TLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + F I Y + + S+ G I Q G+ + Sbjct: 124 TPERKK--SVDFSKIYYRPSGEYFLINKNDRAKYHSLISFKGQKIGAQNGSLQYQLVKKQ 181 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 H ++ + A ++ + A + A ++ PS + D+ K Sbjct: 182 MPK----SHVKGLGKINTLVLALQSGKVSAVVMEELI--AKAYAHNNPSLYCFKSDL--K 233 Query: 224 SPL---APAIIQGDTEWYNIVSWTHYAMVT 250 P A A+ + + V+ T ++ Sbjct: 234 EPQAGNAIAVAKNQPDLLKEVNKTVDKVIA 263 >gi|309804770|ref|ZP_07698834.1| ABC transporter, permease protein [Lactobacillus iners LactinV 09V1-c] gi|309806268|ref|ZP_07700281.1| ABC transporter, permease protein [Lactobacillus iners LactinV 03V1-b] gi|312871595|ref|ZP_07731687.1| ABC transporter, permease protein [Lactobacillus iners LEAF 3008A-a] gi|312871955|ref|ZP_07732037.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2062A-h1] gi|312873247|ref|ZP_07733303.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2052A-d] gi|312874656|ref|ZP_07734680.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2053A-b] gi|325911684|ref|ZP_08174091.1| ABC transporter, permease protein [Lactobacillus iners UPII 143-D] gi|325913019|ref|ZP_08175392.1| ABC transporter, permease protein [Lactobacillus iners UPII 60-B] gi|329921097|ref|ZP_08277620.1| ABC transporter, permease protein [Lactobacillus iners SPIN 1401G] gi|308165880|gb|EFO68099.1| ABC transporter, permease protein [Lactobacillus iners LactinV 09V1-c] gi|308167252|gb|EFO69418.1| ABC transporter, permease protein [Lactobacillus iners LactinV 03V1-b] gi|311089886|gb|EFQ48306.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2053A-b] gi|311091258|gb|EFQ49646.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2052A-d] gi|311092532|gb|EFQ50894.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2062A-h1] gi|311092820|gb|EFQ51172.1| ABC transporter, permease protein [Lactobacillus iners LEAF 3008A-a] gi|325476450|gb|EGC79609.1| ABC transporter, permease protein [Lactobacillus iners UPII 143-D] gi|325477699|gb|EGC80838.1| ABC transporter, permease protein [Lactobacillus iners UPII 60-B] gi|328935004|gb|EGG31493.1| ABC transporter, permease protein [Lactobacillus iners SPIN 1401G] Length = 492 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 92/270 (34%), Gaps = 33/270 (12%) Query: 1 MYK----DFFVSILCL--IILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAE 49 M K ++ CL + F++ + A SIL IK + L G + Sbjct: 1 MKKCNLFKIIANLACLMTFLCLFSANAVAADHSSKSILTCIKNKKELVVGTSADYPPLEF 60 Query: 50 VK---ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + + G D++ + ++ + + ++ +AL+++++D++ Sbjct: 61 IDNQNGTNKYVGVDIELAKEIAKDLGVK---LVVKNMSFDSLLVALETRKVDMVISGLTP 117 Query: 107 TLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + F I Y + + S+ G I Q G+ + Sbjct: 118 TPERKK--SVDFSKIYYRPSGEYFLINKNDRAKYHSLISFKGQKIGAQNGSLQYQLVKKQ 175 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 H ++ + A ++ + A + A ++ PS + D+ K Sbjct: 176 MPK----SHVKGLGKINTLVLALQSGKVSAVVMEELI--AKAYAHNNPSLYCFKSDL--K 227 Query: 224 SPL---APAIIQGDTEWYNIVSWTHYAMVT 250 P A A+ + + V+ T ++ Sbjct: 228 EPQAGNAIAVAKNQPDLLKEVNKTVDKVIA 257 >gi|302191162|ref|ZP_07267416.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus iners AB-1] gi|309803182|ref|ZP_07697279.1| ABC transporter, permease protein [Lactobacillus iners LactinV 11V1-d] gi|308164690|gb|EFO66940.1| ABC transporter, permease protein [Lactobacillus iners LactinV 11V1-d] Length = 492 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 92/270 (34%), Gaps = 33/270 (12%) Query: 1 MYK----DFFVSILCL--IILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAE 49 M K ++ CL + F++ + A SIL IK + L G + Sbjct: 1 MKKCNLFKIIANLACLMTFLCLFSANAVAADHSSKSILTCIKNKKELVVGTSADYPPLEF 60 Query: 50 VK---ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + + G D++ + ++ + + ++ +AL+++++D++ Sbjct: 61 IDNQNGTNKYVGVDIELAKEIAKDLGVK---LVVKNMSFDSLLVALETRKVDMVISGLTP 117 Query: 107 TLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + F I Y + + S+ G I Q G+ + Sbjct: 118 TPERKK--SVDFSKIYYRPSGEYFLINKNDRAKYHSLISFKGQKIGAQNGSLQYQLVKKQ 175 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 H ++ + A ++ + A + A ++ PS + D+ K Sbjct: 176 MPK----SHVKGLGKINTLVLALQSGKVSAVVMEELI--AKAYAHNNPSLYCFKSDL--K 227 Query: 224 SPL---APAIIQGDTEWYNIVSWTHYAMVT 250 P A A+ + + V+ T ++ Sbjct: 228 EPQAGNAIAVAKNQPDLLKEVNKTVDKVIA 257 >gi|259501631|ref|ZP_05744533.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus iners DSM 13335] gi|259166916|gb|EEW51411.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus iners DSM 13335] Length = 498 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 92/270 (34%), Gaps = 33/270 (12%) Query: 1 MYK----DFFVSILCL--IILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAE 49 M K ++ CL + F++ + A SIL IK + L G + Sbjct: 7 MKKCNLFKIIANLACLMTFLCLFSANAVAADHSSKSILTCIKNKKELVVGTSADYPPLEF 66 Query: 50 VK---ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + + G D++ + ++ + + ++ +AL+++++D++ Sbjct: 67 IDNQNGTNKYVGVDIELAKEIAKDLGVK---LVVKNMSFDSLLVALETRKVDMVISGLTP 123 Query: 107 TLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + F I Y + + S+ G I Q G+ + Sbjct: 124 TPERKK--SVDFSKIYYRPSGEYFLINKNDRAKYHSLISFKGQKIGAQNGSLQYQLVKKQ 181 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 H ++ + A ++ + A + A ++ PS + D+ K Sbjct: 182 MPK----SHVKGLGKINTLVLALQSGKVSAVVMEELI--AKAYAHNNPSLYCFKSDL--K 233 Query: 224 SPL---APAIIQGDTEWYNIVSWTHYAMVT 250 P A A+ + + V+ T ++ Sbjct: 234 EPQAGNAIAVAKNQPDLLKEVNKTVDKVIA 263 >gi|170732513|ref|YP_001764460.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|169815755|gb|ACA90338.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 264 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 74/219 (33%), Gaps = 13/219 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F +G GFD+D A+ + + +K ++ + ALQ Sbjct: 30 KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KTKCVWVENDFDGLIPALQ 86 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152 +++ D ++ + T R+ +AF Y I + G + + L G + V Sbjct: 87 ARKFDAINSDMTITEQRK--HAIAFTDPIYTIPNQLIAKQGSGLLPTPQSLKGKRVGVLQ 144 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT E + + ++ + A ++ R DA D A LT + Sbjct: 145 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGSKGFLTKPQGQ 202 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246 +S + + + + D + Sbjct: 203 GFAFAGGTVSDAEILGSGVGFGLRKNDAALKTALDQALK 241 >gi|104774186|ref|YP_619166.1| amino acid ABC transporter permease/substrate-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423267|emb|CAI98100.1| Amino Acid ABC transporter, substrate binding /permease protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 493 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 87/257 (33%), Gaps = 24/257 (9%) Query: 6 FVSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGFAE---VKA 52 ++L L LF + + +++ IKK G L GI+ V Sbjct: 1 MTALLLLAGLFTAAIPAVDAASSRKVASGTVMKKIKKSGKLVVGISADYPPLEFTKNVNG 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + G DV+ + ++ + ++ ++ +AL++ +ID++ T R+ Sbjct: 61 KNKYVGVDVELAKQIAKDLGVK---LEIKNMDFDSLLVALETGKIDVIISGMTPTAERKK 117 Query: 113 SLGLAFRPITY---FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + F I Y D K +S + G ++ Q G+ +L + Sbjct: 118 --SIDFSKIYYAEKSDYFVISKTNKAKYTSTASFKGKTVGAQTGSLQYTSLKKNAAKSGI 175 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 K + + A ++ + DA TND V ++ A Sbjct: 176 KVKGLAKISN--LLMALKSGKVDAVLLGE-LNAKTYTTNDTSLSLVKSSLSQAQMGNAVG 232 Query: 230 IIQGDTEWYNIVSWTHY 246 + +G + ++ T Sbjct: 233 VAKGQGDLVKAINKTIN 249 >gi|224541590|ref|ZP_03682129.1| hypothetical protein CATMIT_00761 [Catenibacterium mitsuokai DSM 15897] gi|224525502|gb|EEF94607.1| hypothetical protein CATMIT_00761 [Catenibacterium mitsuokai DSM 15897] Length = 253 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 74/237 (31%), Gaps = 14/237 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L+ + N+S + K + F +G G D Sbjct: 3 MKKFGAIVLAGLMAVSLVGCGGNSSSKNEEK---TYIIATDKTYPPFEMEDDSGKLVGVD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D RA++ KI+ L AL+S + D + R+ F Sbjct: 60 MDLIRAIAKD---QKFKIKINSLGFDAACTALESGEADGVIAGMSINDERK--QKYDFSD 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + KK GI + L G ++ + T + K + Sbjct: 115 QYYETGVSMGVAKKSGIKGYADLKGKTVVAKTSTAGLKYAQSIKDKYGFKLEVVEESTF- 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTE 236 + ++ A D LK H +P S + A+++G+ + Sbjct: 174 -MFEKVKSGEAAACFEDYPV---LKYMVKTGQLHFDIPCGKESPAYYGFAVLKGENK 226 >gi|325278187|ref|ZP_08143686.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] gi|324096681|gb|EGB95028.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] Length = 250 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 71/213 (33%), Gaps = 8/213 (3%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ F V A+ GFDVD AL + + + + + AL + Sbjct: 23 TLRFATEGAYPPFNYVDADNQLHGFDVDITHALCEQMKVE---CTLVAQDWEGIIPALMA 79 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS-QLSGASICVQAG 153 ++ D + + T R +AF Y + K I+ G ++ Q+ Sbjct: 80 RKYDAVVASMIDTEERRK--KIAFTDHYYRTPLTVAVAKDSKITDAQTHFDGYTVGAQSS 137 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T + D + ++ ++E +A A R D D L N Sbjct: 138 STQAIYAEDVYAKAGAD--VKLYPTMDEANADLAAGRLDGVIADKFPLQEWISKNGGDCC 195 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 ++ +K+ A A+ + D ++ Sbjct: 196 KILGDVANTKADAAIAVRKDDEALRQRLNTALQ 228 >gi|227873128|ref|ZP_03991420.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Oribacterium sinus F0268] gi|227841022|gb|EEJ51360.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Oribacterium sinus F0268] Length = 298 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 80/231 (34%), Gaps = 12/231 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 G G + V +G + G+D++ ++ + D + + P+N + L Sbjct: 65 SNGSFTVGFDQEFPPMGFVGEDGSYTGYDLELAEEVAKRL--DLTFVP-KPINWDAKDLE 121 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 L S ID + + F + Q F++ + ISS+S L G ++ VQ Sbjct: 122 LNSGNIDCIWNGFGMEGREDS---YTFVGPYLANKQVFVVREDSDISSLSDLKGKAVEVQ 178 Query: 152 AGTTTELTLADYFKA--HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 +T L + + + CDA D T Sbjct: 179 KDSTGLTALNREENKSLKDSFGSLTEVGDYQNAMMDLESGACDAICMDSVVAEYQIKTFK 238 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 + + +L + +++ +G+TE + V T M EE I + N Sbjct: 239 KKA--KVLSESLTEEQYGIGFKKGNTELADKVKKTLLEMK--EEGAIDKIN 285 >gi|162421292|ref|YP_001604961.1| histidine ABC transporter periplasmic histidine-binding protein [Yersinia pestis Angola] gi|165937068|ref|ZP_02225633.1| histidine ABC transporter, periplasmic histidine-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|166008127|ref|ZP_02229025.1| histidine ABC transporter, periplasmic histidine-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|167421349|ref|ZP_02313102.1| histidine ABC transporter, periplasmic histidine-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424400|ref|ZP_02316153.1| histidine ABC transporter, periplasmic histidine-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|270490135|ref|ZP_06207209.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Yersinia pestis KIM D27] gi|294504641|ref|YP_003568703.1| histidine ABC transporter, periplasmic histidine-binding protein [Yersinia pestis Z176003] gi|162354107|gb|ABX88055.1| histidine ABC transporter, periplasmic histidine-binding protein [Yersinia pestis Angola] gi|165914931|gb|EDR33543.1| histidine ABC transporter, periplasmic histidine-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|165992509|gb|EDR44810.1| histidine ABC transporter, periplasmic histidine-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166960838|gb|EDR56859.1| histidine ABC transporter, periplasmic histidine-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167056282|gb|EDR66051.1| histidine ABC transporter, periplasmic histidine-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|262362702|gb|ACY59423.1| histidine ABC transporter, periplasmic histidine-binding protein [Yersinia pestis D106004] gi|270338639|gb|EFA49416.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Yersinia pestis KIM D27] gi|294355100|gb|ADE65441.1| histidine ABC transporter, periplasmic histidine-binding protein [Yersinia pestis Z176003] Length = 302 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 86/246 (34%), Gaps = 20/246 (8%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 +K G + F ++G+ GFD+D + L I +K ++ + +L+ Sbjct: 68 KEIKIGTDPTYAPFESKNSSGELVGFDIDIAKELCKRI---DTKCTFVESDFDALIPSLK 124 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQA 152 +K++D + + T R+ + F + I K I ++ L G + V Sbjct: 125 AKKVDAIISSLSITEKRQKEIA--FTDKLFAANSRLIAAKGSTIEPTLVALKGKRVGVLQ 182 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T E ++ + + ++ + I A + R DA D A L Sbjct: 183 GSTQEAFANAEWQPKGID--VVAYQNQDLIYADLASGRIDAAFQDEVAASEGFLKQPVGK 240 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 +++ + + + D E ++ AE +Q +K Sbjct: 241 DYIFAGPSVKNDQFFGVGTGMGLRKADVELKEALNKAF-----AEMRN--DGTYDQFAKK 293 Query: 268 TTNPDV 273 + DV Sbjct: 294 YFDFDV 299 >gi|107023050|ref|YP_621377.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|105893239|gb|ABF76404.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] Length = 247 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 75/219 (34%), Gaps = 11/219 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L I K G L+ + F V + +G+D+D L+ ++ ++ +P+N+ Sbjct: 15 LDTIAKNGTLRVAVPEDYPPFGSVGTDMQPQGYDIDMAGLLAKSLGVK---LKLVPVNSA 71 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R L + ++D++ + T RE + F QG +S+ + L+G Sbjct: 72 NRIPYLTTNKVDMVISSLGKTPEREKV--IDFSSAYAPYFQGVFGPSDVKVSTPADLTGK 129 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++ G E+ L+ FE A+ + + A+ Sbjct: 130 TVGATRGALEEIALSQLAP----NATIKRFEDNNATIQAFLSGQVQLIAAGNIVAAAILA 185 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 P + +I SP + + + + Sbjct: 186 --KNPPRRPEVKFVIKNSPCFVGVNKNEPRLLAKIDDAI 222 >gi|325688152|gb|EGD30171.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK72] gi|325690261|gb|EGD32265.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK115] Length = 287 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 9/246 (3%) Query: 2 YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K + S+ + +L + +S ++ ++ G F+ +G G+D Sbjct: 16 KKTLKYFSLAAVSVLAIGALVACSSSSEKKTEKIKVEVGTVGTTKPFSYEDKDGKLTGYD 75 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ RA+ D ++ + F L S + I + N E + + Sbjct: 76 IEVLRAIFKD--SDKYEVNFNKTKWASIFSGLDSDRYQIGANNIS--YSEERANKYLYAS 131 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-- 178 + ++ K +GI S+ + G S V GT+T L DY K H+ I + Sbjct: 132 PYAKNPTVLVVRKGEGIKSLDDIGGKSTEVVQGTSTAQQLEDYNKEHSDNPTKINYTDGT 191 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237 +++I A R D + + + ++ + P I G + Sbjct: 192 IQQILANLNDGRTDYKVFER-ITVESIIKDQGLKNLEVIELPSDQQPYVYPIIASGQEDL 250 Query: 238 YNIVSW 243 V+ Sbjct: 251 QKFVNK 256 >gi|153938148|ref|YP_001390774.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum F str. Langeland] gi|170757033|ref|YP_001781065.1| polar amino acid ABC transporter amino acid-binding protein [Clostridium botulinum B1 str. Okra] gi|152934044|gb|ABS39542.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum F str. Langeland] gi|169122245|gb|ACA46081.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum B1 str. Okra] gi|295318846|gb|ADF99223.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum F str. 230613] Length = 268 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 77/257 (29%), Gaps = 20/257 (7%) Query: 1 MYKDFFVSIL----CLIILFFTSFSTNASI------LGDIKKRGFLKCGINTGLVGFAEV 50 M K +S+L C+I S IK +G L G+ F Sbjct: 1 MSKKKILSVLFIVVCIISFTLIGCGQKNSSNGKDSSYSKIKDKGQLVVGLCAQYPPFESR 60 Query: 51 KAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 + +GFDVD + L + K++ + + D+L Sbjct: 61 NDKTDEIEGFDVDLAKELGKEM---DLKVEIKDAEWEALLGGVNKGDYDVLITCMSKKEA 117 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 E ++ + D + I + L G + VQ T++E + + Sbjct: 118 AEANINTSDTY-YKLDDIIVVNKNNNFIHNKGDLKGKVVGVQTSTSSEQVV----DKLDG 172 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + R E + +R DA A A + + + I+ + S + Sbjct: 173 IKEIKRYNRNPEAFIDLKNNRIDAVVVG-YAYAATTMKDKKDDNLKIINSPVGSSDIVMV 231 Query: 230 IIQGDTEWYNIVSWTHY 246 +G ++ Sbjct: 232 TKKGSDHLTKELNKALK 248 >gi|113460358|ref|YP_718419.1| amino acid ABC transporter substrate-binding [Haemophilus somnus 129PT] gi|112822401|gb|ABI24490.1| amino acid ABC transporter substrate-binding protein, PAAT family [Haemophilus somnus 129PT] Length = 260 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 65/210 (30%), Gaps = 11/210 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K F+ L I T AS+L I +G + G F + G G+DV Sbjct: 3 KKITFLFTAVLTIAANTQALAQASLLDRINNKGTITVGTEGTYAPFTYHDSTGKLTGYDV 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + RA++ + +++ L++ + D+++ T E Sbjct: 63 EVTRAVAKKLG---VTVEFKETQWDAMLAGLKAGRFDLVANQVALT-TPERQATFDKSEP 118 Query: 122 TYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + G + + I V + G Q ++ LA + + + + Sbjct: 119 YSWSGAMLVARDNETRIKQVEDVKGLK-AAQTLSSNYGELAQ-----KYQAKIVPIDGMA 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + R D D AL Sbjct: 173 QGLLLIQQKRADMTFNDALALLDYLKKYPN 202 >gi|298252298|ref|ZP_06976101.1| extracellular solute-binding protein family 3 [Ktedonobacter racemifer DSM 44963] gi|297546890|gb|EFH80758.1| extracellular solute-binding protein family 3 [Ktedonobacter racemifer DSM 44963] Length = 296 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 80/260 (30%), Gaps = 23/260 (8%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKR----------GFLKCGINTGLVGFAEVK-AN 53 ++ L + +T ++ ++K G L G +T V A+ Sbjct: 22 MLGLMMILAACGSSGTATGSNSGDNVKATVAAPKDLITGGTLTVGSDTTYPPQEYVDTAS 81 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GFDVD + + K+ N L SK+ D++ + Sbjct: 82 GQATGFDVDLITEMGKRMG---LKVNVKKANFDTIIDDLSSKRYDVVISAVTINP--DRQ 136 Query: 114 LGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTL----ADYFKAHN 168 F P + ISSV L G + VQ T L D A Sbjct: 137 KKAQFIPYFNAGQSLLVQKGNPDHISSVKDLCGKKVGVQTNTVEFDALTAAKKDCTTAGK 196 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 V + ++ R DA D P + I I ++P Sbjct: 197 PTIALTVLDAQTDVIQLLADKRVDATYQDSPVTDYYLKL--NPGQFEIGGAITDQAPEGI 254 Query: 229 AIIQGDTEWYNIVSWTHYAM 248 + + DTE +N + + A+ Sbjct: 255 VVRKDDTEMFNALKAAYDAV 274 >gi|229522319|ref|ZP_04411735.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholerae TM 11079-80] gi|229340304|gb|EEO05310.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholerae TM 11079-80] Length = 256 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 83/260 (31%), Gaps = 31/260 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L+ + +K + F + N +GFD Sbjct: 14 MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + AL+ K+ D D T R + F Sbjct: 61 VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ ++ + L G + VQ G+T + L + + + + Sbjct: 116 PYYDNSAAFVSLAG-KVADQAVLKGKRVGVQNGSTHQSFLLEQL----SDVVAVPYSSYQ 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + + R D+ GD + + + + + ++ + A+ + + Sbjct: 171 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQ 227 Query: 236 EWYNIVSWTHYAMVTAEELG 255 + ++ A+ E Sbjct: 228 ALLDQLNAALEAVKENGEYA 247 >gi|294339406|emb|CAZ87762.1| putative ABC-type amino acid transport, periplasmic component [Thiomonas sp. 3As] Length = 288 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 85/256 (33%), Gaps = 13/256 (5%) Query: 6 FVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDF 63 + L +F S S L K++G L + + +G G DVD Sbjct: 17 LAGSVALCAVFCASASATPIALPQKYKEQGHLTIAADATYAPMEFIAKDGKTVVGADVDL 76 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 +A++ + ++ + ALQS + D+ + T RE + +T Sbjct: 77 GKAIAKKLGVKAD---FINASFDSIIPALQSGKYDMSMSSFTITKKREEVVDFV-SYMTA 132 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA----DYFKAHNMKYHPIVFERV 179 ++ ++ L G S+ V+ GTT A + A VF Sbjct: 133 GTSFYVKGKGGPKVNGLADLCGMSVAVEKGTTQAADAAKQSQECVAAGKKAVTVSVFPDQ 192 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A + R S + A + R + + + + +P AI + ++ Sbjct: 193 NGANLAIVSGRAQ-VGMADSPVAAWIVEESRG-QFKLTGESYNSAPYGIAIPK-NSGLAE 249 Query: 240 IVSWTHYAMVTAEELG 255 V ++ + E Sbjct: 250 PVLQALKEVIASGEYA 265 >gi|297198789|ref|ZP_06916186.1| histidine-binding protein [Streptomyces sviceus ATCC 29083] gi|197717404|gb|EDY61438.1| histidine-binding protein [Streptomyces sviceus ATCC 29083] Length = 283 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 83/256 (32%), Gaps = 25/256 (9%) Query: 3 KDFFVSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGF-AEVK 51 + + +L + ++ A + +K G L + F +E+ Sbjct: 10 RVLAATTATAGLLLVAACTSSDDGGSGSKTAAGGVELVKA-GQLTTCTHLPYPPFQSEID 68 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G +GFDV ++ + I P + L S D+ + T R+ Sbjct: 69 --GKVQGFDVSLIDLVAKDLGVKQE-ILDTPFENFKTGAFLNSGSCDLAAAGMTITEERK 125 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNM 169 + F + Q ++ K GISS++ + QA TT E + Sbjct: 126 K--NVDFSDPYFDATQALLVAKGSGISSLADAKAKKVKLGAQAQTTGEDYV------KGQ 177 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + P+ FE + + R+ + A D + + +I + Sbjct: 178 GFDPVSFESSDAVLNGLRSGQVKAVVIDYPVVQGWLKNKANADAFQVADNINTGEQYGFT 237 Query: 230 IIQGDTEWYNIVSWTH 245 + +G+T+ V+ Sbjct: 238 VKKGNTKLLAAVNKAL 253 >gi|309807750|ref|ZP_07701684.1| putative arginine ABC transporter, periplasmic arginine-binding protein ArtP [Lactobacillus iners LactinV 01V1-a] gi|308169010|gb|EFO71094.1| putative arginine ABC transporter, periplasmic arginine-binding protein ArtP [Lactobacillus iners LactinV 01V1-a] Length = 293 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 92/270 (34%), Gaps = 33/270 (12%) Query: 1 MYK----DFFVSILCL--IILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAE 49 M K ++ CL + F++ + A SIL IK + L G + Sbjct: 1 MKKCNLFKIIANLACLMTFLCLFSANAVAADHSSKSILTCIKNKKELVVGTSADYPPLEF 60 Query: 50 VK---ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + + G D++ + ++ + + ++ +AL+++++D++ Sbjct: 61 IDNQNGTNKYVGVDIELAKEIAKDLGVK---LVVKNMSFDSLLVALETRKVDMVISGLTP 117 Query: 107 TLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + F I Y + + S+ G I Q G+ + Sbjct: 118 TPERKK--SVDFSKIYYRPSGEYFLINKNDRAKYHSLISFKGQKIGAQNGSLQYQLVKKQ 175 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 H ++ + A ++ + A + A ++ PS + D+ K Sbjct: 176 MPK----SHVKGLGKINTLVLALQSGKVSAVVMEELI--AKAYAHNNPSLYCFKSDL--K 227 Query: 224 SPL---APAIIQGDTEWYNIVSWTHYAMVT 250 P A A+ + + V+ T ++ Sbjct: 228 EPQAGNAVAVAKNQPDLLKEVNKTVDKVIA 257 >gi|303325413|ref|ZP_07355856.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Desulfovibrio sp. 3_1_syn3] gi|302863329|gb|EFL86260.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Desulfovibrio sp. 3_1_syn3] Length = 247 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 33/244 (13%), Positives = 76/244 (31%), Gaps = 21/244 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M++ +++L L + + + + + A +G+ Sbjct: 1 MFRGVSLALLVLTLFCGQALAAE-----------KYTVASDCTWPPMEMLNAQKQPEGYS 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D+ RA++ A + + + F + + + DI++ +T T R+ F Sbjct: 50 TDYIRAVAKAAGFE---VDVRNIAWDGIFGGVATGKYDIVASSTTITPERQK--QFDFSD 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y Q ++ I S++ L G + Q GTT + ++ ++ V Sbjct: 105 PYYEVVQAVVLPAGTSIKSLADLKGKKVGGQIGTTGIFV----MRKADVDADLKEYDDVG 160 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA D + + K + +G + + Sbjct: 161 LAIQDMVGGRLDAVICDDPVAMYYVNKKADYAGKLNLSFKTGDKEYYGFTVRKGRQDLVD 220 Query: 240 IVSW 243 ++ Sbjct: 221 KLNK 224 >gi|330825798|ref|YP_004389101.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans K601] gi|329311170|gb|AEB85585.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus denitrificans K601] Length = 300 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 86/235 (36%), Gaps = 15/235 (6%) Query: 9 ILCLIILFFTSFSTNASIL------GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61 L +A+ + IK+ G L+ G F+ + +G +GFD Sbjct: 31 AAAFDALVAQGPVADAATIRSSTWASKIKQAGTLRLGGTQTSNLFSLLNEKDGKIRGFDA 90 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + ++ I D +K ++ + + R L + Q+D++ T R ++F Sbjct: 91 GLAQLITRYILGDGAKYRFTQVTSSTREQVLINDQVDMVFATYSITPARAE--KISFAGP 148 Query: 122 TYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ I S + L+G + QAG+T LA Y F+ + Sbjct: 149 YYTSQAGVLVKANNKTIQSYNDLAGKKVATQAGSTGPAILAQYASKA----VVQEFQTHQ 204 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 E A R R DAY D + L L+ + ++ P + +G Sbjct: 205 EALDALRQGRVDAYVTDYTLLL-NALSLGTGDARLAGAPFGAQDPYGVGLPKGSD 258 >gi|118586344|ref|ZP_01543796.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Oenococcus oeni ATCC BAA-1163] gi|118433235|gb|EAV39949.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Oenococcus oeni ATCC BAA-1163] Length = 282 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 70/210 (33%), Gaps = 7/210 (3%) Query: 39 GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98 G++ + +G GFDVD A + K+++ P+N + L QID Sbjct: 54 GLDDTFIPMGFRNKSGKLIGFDVDLADATFKKLG---IKVEWEPINWSTKEQLLNDGQID 110 Query: 99 ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158 + + R+ +AF Q + K I+S + + G ++ +Q G+T + Sbjct: 111 AIWNGYTISAARKK--KVAFSIPYKKGTQVLVTLSKDKINSFADMKGKTLGLQNGSTAQT 168 Query: 159 TLADYFK--AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 Y +K P ++ ++ +A R D ++ I Sbjct: 169 QFQQYKNLLKKYVKGTPQKYDTFDKAFMDLKAGRIQGILVDSMYAGYYVKHLSDSQDYKI 228 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + D + V+ Sbjct: 229 IYGGYPTDENGVGFRKSDVKLREEVNTVLK 258 >gi|90419717|ref|ZP_01227626.1| periplasmic substrate-binding protein, ABC-type amino acid transporter precursor [Aurantimonas manganoxydans SI85-9A1] gi|90335758|gb|EAS49506.1| periplasmic substrate-binding protein, ABC-type amino acid transporter precursor [Aurantimonas manganoxydans SI85-9A1] Length = 253 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 72/225 (32%), Gaps = 13/225 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L DIK G L+ G F A+G GFDV+ R ++ + + ++++ Sbjct: 21 GSLEDIKSAGTLRIGTEGTYAPFTYHDASGALVGFDVEIGREIAERLGVE---VEFVEGK 77 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQL 143 L S + D + T R+ F I+ I+S + L Sbjct: 78 WDGLIAGLASDRYDAVINQVGITEERQA--RFDFSKPYIVSKAVLIVKDDNADIASFADL 135 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G Q+ T+ +A+ A + E ++ R DA D + Sbjct: 136 DGKR-AAQSLTSNYGRIAEEAGA-----SLVGTEGFDQSIQLVLTGRADATINDNLSYLD 189 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 K I+ + + +G+ E + A+ Sbjct: 190 FKKQKPDAPV-KIVASEAEAAASGVVVQKGNPELVAEIDKALDAI 233 >gi|254242557|ref|ZP_04935879.1| hypothetical protein PA2G_03309 [Pseudomonas aeruginosa 2192] gi|126195935|gb|EAZ59998.1| hypothetical protein PA2G_03309 [Pseudomonas aeruginosa 2192] Length = 263 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 79/226 (34%), Gaps = 13/226 (5%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 + G L+ GI F+ A G+ GFD D AL + + K Q++ Sbjct: 24 AVAADGNLRIGIEAAYPPFSFKTAEGELAGFDYDIGNALCAQM---QVKCQWIEQEYDGL 80 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147 +L+ ++ID + T R + F YF +M + + S SQL+G Sbjct: 81 IPSLKVRKIDAALSSITITEERRR--SVDFTHKYYFTPGRLVMKEGAQLDDSFSQLAGKR 138 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 I VQ G T + + + + +EI A R DA D L L Sbjct: 139 IGVQRGATADRFASAVLAKAG--AEVVRYTSQDEIYLDLVAGRLDATFADSIPLQTGFLD 196 Query: 208 NDRPSEHVIL-----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R + + A+ +GD E ++ A+ Sbjct: 197 TPRGKGYAFVGPEFKDPKYFGEGAGIAVRKGDAELVGKLNAAIDAI 242 >gi|295102409|emb|CBK99954.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Faecalibacterium prausnitzii L2-6] Length = 281 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 47/228 (20%), Positives = 78/228 (34%), Gaps = 18/228 (7%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + G L N + G +G DVD +A++ + ++Q ++ L+ Sbjct: 60 EAGKLTMATNATFPPYEMTTDAGTIEGIDVDTAQAIAEKLG---LELQIDDMDFDAALLS 116 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 +Q + DI T R + +F Q I+ + I+SV L+G I Q Sbjct: 117 VQQGKADIAMAGITVTDERMAVM--SFSDSYATGIQSVIVPEGSDIASVDDLAGKKIGTQ 174 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 GTT L +D F + ++ A + DA D A P Sbjct: 175 RGTTGYLYCSDDFGE----DAVVAYDNGLTAVQALNNGQVDAVVIDNE--PAKAYVESNP 228 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 IL ++ A + +G+T V+ EEL Sbjct: 229 G-LKILDTSYAEEDYAIGMAKGNTALLEAVNAAL------EELKADGT 269 >gi|150398330|ref|YP_001328797.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150029845|gb|ABR61962.1| extracellular solute-binding protein family 3 [Sinorhizobium medicae WSM419] Length = 257 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 71/231 (30%), Gaps = 14/231 (6%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 S L D+K G LK G F A+G GFDV+ + ++ + P +L Sbjct: 23 AGSNLEDVKSAGVLKIGTEGSYAPFTYHDASGALVGFDVEIGQEVAKRLGVKPE---FLE 79 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVS 141 L + + D + T R+ F I+ + + + Sbjct: 80 GKWDGLIAGLDANRYDAVINQVGITEERKK--KYDFSEPYIASKAVLIVRGDDEEVKDFA 137 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G Q+ T+ LA A + + ++ R DA D + Sbjct: 138 DLKGKKSA-QSLTSNFGKLAQASGA-----ELVGTDGFDQSIQLVLTGRADATINDSLSF 191 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 K + + I +G+ E ++ A + A+ Sbjct: 192 LDFKKQKPDANVKIAAEKPD-ADYSGIIIRKGEPELLEAINKAL-AEIKAD 240 >gi|313109287|ref|ZP_07795255.1| putative amino acid binding protein [Pseudomonas aeruginosa 39016] gi|310881757|gb|EFQ40351.1| putative amino acid binding protein [Pseudomonas aeruginosa 39016] Length = 263 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 79/226 (34%), Gaps = 13/226 (5%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 + G L+ GI F+ A G+ GFD D AL + + K Q++ Sbjct: 24 AVAADGNLRIGIEAAYPPFSFKTAEGELAGFDYDIGNALCAQM---QVKCQWIEQEYDGL 80 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147 +L+ ++ID + T R + F YF +M + + S SQL+G Sbjct: 81 IPSLKVRKIDAALSSITITEERRR--SVDFTHKYYFTPGRLVMKEGAQLDDSFSQLAGKR 138 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 I VQ G T + + + + +EI A R DA D L L Sbjct: 139 IGVQRGATADRFASAVLAKAG--AEVVRYTSQDEIYLDLVAGRLDATFADSIPLQTGFLD 196 Query: 208 NDRPSEHVIL-----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R + + A+ +GD E ++ A+ Sbjct: 197 TPRGKGYAFVGPEFKDPRYFGEGAGIAVRKGDAELVGKLNAAIDAI 242 >gi|294794962|ref|ZP_06760097.1| glutamine ABC transporter, glutamine-binding protein [Veillonella sp. 3_1_44] gi|294454324|gb|EFG22698.1| glutamine ABC transporter, glutamine-binding protein [Veillonella sp. 3_1_44] Length = 274 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 53/325 (16%), Positives = 93/325 (28%), Gaps = 75/325 (23%) Query: 1 MYKDFFVSILCLII----LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M ++L L + + + G + F +G Sbjct: 14 MKFKKIAALLGAFTIASSLLIAGCGNAGNS------QKAWRVGTDATYAPFGFKDKDSGK 67 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D A+++ + LN ALQS IDI + + R Sbjct: 68 LAGFDIDIINAIANEEGIEAD---IQNLNFDALLPALQSNTIDIAISDMTISEERAK--S 122 Query: 116 LAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F Y G G +++ I+S L G I V G+T + A +++ I Sbjct: 123 VDFSKPYYIAGNGLVVNIDNTNINSFKDLEGKRIGVSIGSTGAEIASKIPNADVRQFNII 182 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 V + + D D + + + +PL A+ +G+ Sbjct: 183 V-----DAFLELQNKGVDVVINDTPVNEYYVNGKGKGIA-KVTGEDYDAAPLGIAVKKGN 236 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294 TE N ++ GL K Sbjct: 237 TELLNKIND----------------------------------------------GLAK- 249 Query: 295 WTYRIIRHMGNYGEMFDRNLGNQSE 319 I+ G Y E++ + G + Sbjct: 250 -----IKANGKYAEIYKKWFGKEPP 269 >gi|149365248|ref|ZP_01887283.1| histidine-binding periplasmic protein [Yersinia pestis CA88-4125] gi|218929846|ref|YP_002347721.1| histidine-binding periplasmic protein [Yersinia pestis CO92] gi|115348457|emb|CAL21393.1| histidine-binding periplasmic protein [Yersinia pestis CO92] gi|149291661|gb|EDM41735.1| histidine-binding periplasmic protein [Yersinia pestis CA88-4125] Length = 262 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 86/246 (34%), Gaps = 20/246 (8%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 +K G + F ++G+ GFD+D + L I +K ++ + +L+ Sbjct: 28 KEIKIGTDPTYAPFESKNSSGELVGFDIDIAKELCKRI---DTKCTFVESDFDALIPSLK 84 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQA 152 +K++D + + T R+ + F + I K I ++ L G + V Sbjct: 85 AKKVDAIISSLSITEKRQKEIA--FTDKLFAANSRLIAAKGSTIEPTLVALKGKRVGVLQ 142 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+T E ++ + + ++ + I A + R DA D A L Sbjct: 143 GSTQEAFANAEWQPKGID--VVAYQNQDLIYADLASGRIDAAFQDEVAASEGFLKQPVGK 200 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 +++ + + + D E ++ AE +Q +K Sbjct: 201 DYIFAGPSVKNDQFFGVGTGMGLRKADVELKEALNKAF-----AEMRN--DGTYDQFAKK 253 Query: 268 TTNPDV 273 + DV Sbjct: 254 YFDFDV 259 >gi|325062835|gb|ADY66525.1| amino acid ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 279 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 67/193 (34%), Gaps = 11/193 (5%) Query: 8 SILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCR 65 I +++ + + +A L IK RG L G+ F + + KG ++D + Sbjct: 12 LIAGTVVIASMATAAHADATLDRIKGRGKLTVGVILSGAPFGFIDPKTQEQKGLNIDVAK 71 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL++ + + + R LQ ++DIL N +T R +L P Sbjct: 72 ALAAGLGVELVT---ETVTPPNRVQFLQQGKVDILIANMQYTEERAKTLDYVPTP-YDRQ 127 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G I K GI L G CV G+ L + + A E A Sbjct: 128 GGAAIGRKDSGIKDWPDLKGKIACVSQGSNYTQPLIEQYGA-----QVKALPSQPESLLA 182 Query: 186 YRAHRCDAYTGDI 198 + CD Sbjct: 183 LKGGNCDVSVHVN 195 >gi|229526720|ref|ZP_04416124.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholerae bv. albensis VL426] gi|229336878|gb|EEO01896.1| arginine ABC transporter periplasmic arginine-binding protein ArtI [Vibrio cholerae bv. albensis VL426] Length = 256 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 82/258 (31%), Gaps = 27/258 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L+ + +K + F + N +GFD Sbjct: 14 MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + AL+ K+ D D T R + F Sbjct: 61 VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ ++ + L G + VQ GTT + L + + + + Sbjct: 116 PYYDNSAAFVSLAG-KVADQATLKGKRVGVQNGTTHQSFLLE----QRSDVVAVPYSSYQ 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTEW 237 + + R D+ GD + + D E+ + + A+ + + Sbjct: 171 DAFIDMKNGRIDSVFGDTAVVAEW-FKGDNKLEYVGERVTNPQYFGNGFGIAVNKDNQAL 229 Query: 238 YNIVSWTHYAMVTAEELG 255 + ++ A+ E Sbjct: 230 LDQLNAALEAVKENGEYA 247 >gi|51245834|ref|YP_065718.1| glutamine ABC-transporter, periplasmic substrate-binding protein (GlnH) [Desulfotalea psychrophila LSv54] gi|50876871|emb|CAG36711.1| probable glutamine ABC-transporter, periplasmic substrate-binding protein (GlnH) [Desulfotalea psychrophila LSv54] Length = 231 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 72/212 (33%), Gaps = 12/212 (5%) Query: 44 LVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 F +G GFDV+ A++ D P+ K LQS QID Sbjct: 18 FPPFEFKDPASGKHVGFDVELWAAIAREAGLDYE---LQPMAFKGIVPGLQSAQIDAGIA 74 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD 162 T R+ + F Y G ++ K I ++ L + + GTT+ D Sbjct: 75 GMSITDKRKKV--IDFSDGYYDSGLLLLVPKGSSIKGLADLVDKKVATKTGTTSV----D 128 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 + K H+ K ++F + DA D + + + + I+ + + Sbjct: 129 FLKKHSAKTKLVLFPNDNAMFMELMTGGVDAVMFDRPVIESFASKRGQG-QVTIVDTLYA 187 Query: 223 KSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 P +G ++ V+ + + E Sbjct: 188 GQPYGIGFPKG-SQLVEKVNIALRTLKDSGEY 218 >gi|27381511|ref|NP_773040.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] gi|27354679|dbj|BAC51665.1| blr6400 [Bradyrhizobium japonicum USDA 110] Length = 280 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 41/276 (14%), Positives = 86/276 (31%), Gaps = 15/276 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + + L + + A L DI+K G LK G V + G GFDV Sbjct: 6 RRRVLRAAAGAATLSLLARAARADTLQDIRKSGVLKAGCQVVQVPWGFSDDKGVLTGFDV 65 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 +F R ++ + P+ + R AL + Q+D+L+ + + F Sbjct: 66 EFVRLFAADLGVKAE---ISPVTSSNRVAALLTGQVDMLAAVMGI--FADRQKVVLFARP 120 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + FI + + S ++G + V GT ++ L ++ Sbjct: 121 YCVNDTVFIGKVGQTVKGWSDMTGLRVGVPRGTPQDIALTKAAPK---GATIQRYDDDAN 177 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A A++ D G + + + +++++ A A + + Sbjct: 178 TVQALIANQVDLIGGASTQVRNIAHVAGDGKFEQKF--VLARAYNAAAFRPSERALADAC 235 Query: 242 -----SWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 + + A ++ + Sbjct: 236 SAFVANSLANGSLPALFDRWIGTSLPDMPATGEGDA 271 >gi|261343374|ref|ZP_05971019.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Providencia rustigianii DSM 4541] gi|282568514|gb|EFB74049.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Providencia rustigianii DSM 4541] Length = 247 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 77/237 (32%), Gaps = 23/237 (9%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 + ++ + ++ F N GFDVD A+ + Sbjct: 11 GAVTLSATAAEKDT---------IRFATEATYAPFEMFDKNNQIVGFDVDLANAMCEKM- 60 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 + + + +L+ ++ + L D T R + F Y + FI Sbjct: 61 --NATCTFTHQSFDSLIPSLKFRRFEALMAGIDITPER--QQQVDFTETYYPNSAEFIAV 116 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K I+ + QL G I VQ GTT + + + K + ++ + + R + Sbjct: 117 K-DKITGIDQLKGKKIGVQNGTTHQKYIMEQHK----DMTVVPYDNYQSAILDLQNGRIN 171 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTEWYNIVSWTH 245 A GD + T + I + L A+ +G+ E + ++ Sbjct: 172 AVFGDTAVADEWLKTKGNENLAAIGDKVTDPQYFGIGLGIAVRKGNKELLDKMNKAL 228 >gi|153010588|ref|YP_001371802.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151562476|gb|ABS15973.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 275 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 78/259 (30%), Gaps = 20/259 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + IL + L + ++ + N G + + + GFD Sbjct: 1 MKKIITIMGIAGAILATGFSAYAGETLDRVMEKKAMVVATNAGWPPQSFLDDSNKLVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + + + + + D+ + T R + + F Sbjct: 61 VDVANEIGKRLG---VTVSFETPDWATLTGGRWQGRYDVGVGSVTPTKAR--ANVIDFAG 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE--- 177 I Y+ +++HK SV+ L G I V+ TT+E + PI ++ Sbjct: 116 IYYYSPYVYVVHKDSAAKSVADLKGKIIGVETATTSEDYARRQLEIDAPGLPPIEYKLEP 175 Query: 178 -------RVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 R R DA A + +I + + PL Sbjct: 176 GEIRTFADSMLPFDDLRLGDGVRIDAII--APEQTAQNAIKNGYPVKIIEGEYAFREPLV 233 Query: 228 PAIIQGDTEWYNIVSWTHY 246 + D +W + Sbjct: 234 VIAEKNDPDWTAKIGEIIK 252 >gi|312868382|ref|ZP_07728582.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus parasanguinis F0405] gi|311096127|gb|EFQ54371.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus parasanguinis F0405] Length = 275 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 82/245 (33%), Gaps = 8/245 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K S L L+ + TS S + ++ G F+ + +G G+++ Sbjct: 4 KKVIKYSALGLVAVLATSALVACSSDKSASGKKTIEVGTVGTTKPFSYEEKDGKLTGYEI 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + R + D ++ + F L S + I + N ++ RE + Sbjct: 64 EVLREIFK--GSDKYEVNFNKTEWSSVFAGLDSDRFQIGANNISYSKEREE--KYLYPNP 119 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER--V 179 + ++ K I S+ L G V GT+T L DY K H+ + + + Sbjct: 120 YARNPLVLVVPKDSSIKSLDDLGGKKTEVVQGTSTAKQLEDYNKKHSDNPTNLQYTDGTI 179 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEWY 238 + I A R D + + + ++ + P I + D + Sbjct: 180 QTIMANLADGRTDYKIFER-ISVDTIIRDQGYDNLKVIELPSDQQPYVYPIIAKEDKDLQ 238 Query: 239 NIVSW 243 V+ Sbjct: 239 KFVNK 243 >gi|296876379|ref|ZP_06900431.1| arginine/histidine ABC superfamily ATP binding cassette transporter permease [Streptococcus parasanguinis ATCC 15912] gi|296432669|gb|EFH18464.1| arginine/histidine ABC superfamily ATP binding cassette transporter permease [Streptococcus parasanguinis ATCC 15912] Length = 754 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 63/210 (30%), Gaps = 16/210 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L L + +A +K +T F ++ +KG D Sbjct: 29 MKKKLLACLLFLFPFVAFAGHAHAET---------IKVVFDTAYAPFEFKDSDQTYKGID 79 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ ++ D K A+Q+ Q D + T RE Sbjct: 80 VEILDKVAEINGWDLDK---SFPGFDAAVNAVQAGQADAIMAGMTKTTEREKV--FTMSD 134 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K I+ SQL G ++ V+ GT + L + K F+ + Sbjct: 135 TYYDTKVVIATKKADKITKYSQLKGKTVGVKNGTAAQRFLDKNKDKYGYK--IKTFDTGD 192 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + A DA D + Sbjct: 193 LMYNSLSAGAVDAVMDDQPVIQYAIQKGQD 222 Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 60/192 (31%), Gaps = 10/192 (5%) Query: 44 LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F + G D+D +A++ I+ +QS + Sbjct: 310 FAPFVFQNGKNKYTGIDMDLIKAIAKD---QGFTIEIDNPGFDAAISDVQSGHAQGMIAG 366 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ + F Y + + I S L G ++ V+ GT+++ L + Sbjct: 367 MTVTDARKET--FDFSEPYYTANSILAVQESSKIDSYDDLKGKTVGVKNGTSSQNFLEEN 424 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 K + K F + + + A D + K + + + Sbjct: 425 QKKYGYK--IKTFSDGASMYDSLNSGSVAAIMDDEPVI---KYAIKQGRKFKTPIEGTPS 479 Query: 224 SPLAPAIIQGDT 235 LA A+ +G+ Sbjct: 480 GQLAFAVKKGEN 491 >gi|121602328|ref|YP_988906.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Bartonella bacilliformis KC583] gi|120614505|gb|ABM45106.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Bartonella bacilliformis KC583] Length = 255 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 81/245 (33%), Gaps = 20/245 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++++ + LF NA LK F+ + +N GFD+D Sbjct: 2 KSLVIALIASVALFT--QWANAET---------LKIASEGSYPPFSYIDSNNKLHGFDID 50 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 AL + + + + L +K+ D + + + T R + F Sbjct: 51 ISYALCEKMKVE---CVIIAQDFDGIIPGLLAKKYDAIIASLNPTQER--LKKIDFTNAY 105 Query: 123 YFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y I+ K I S G ++ VQ+ T + D + + + ++ Sbjct: 106 YSTELAVIVTKDSNIEKISTEAFKGKNLGVQSNTVQAIYAEDNYASKG--ANIKLYPTAI 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E++ +HR D D + + +K P+A AI + + N Sbjct: 164 EVNRDLISHRLDVSITDKLQILNWLKNEGEECCKFLGVIENTKLPVAIAIRKKNENLKNK 223 Query: 241 VSWTH 245 + Sbjct: 224 FNQAI 228 >gi|317057988|gb|ADU90705.1| putative amino acid transporter periplasmic ligand binding protein [Collimonas sp. MPS11E8] Length = 268 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 83/240 (34%), Gaps = 14/240 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + + +A L DI+KRG L+ + F V A +G D+D ++ + K Sbjct: 21 AAPAAHADSLSDIQKRGVLRIAVPQDFAPFGSVTAELKLQGLDIDVAGLVAKNMG---LK 77 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +Q +P+ + R LQ+ + D++ RE + F + Sbjct: 78 LQLVPVTSANRIAYLQTAKADLVISTLGKNAEREKVIA--FSQPYSPYNNSVFGPTAIKV 135 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S + L+G +I V GT + L++ +E + +AY A + Sbjct: 136 SGPADLAGKTIGVARGTFQDSQLSETAP---PSATIKRYEDNNGMISAYLAGQVQLVGTG 192 Query: 198 ISALYALKLTN--DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 AL ++P I+ + +++ + V+ EL Sbjct: 193 DFVAVALAAKTTGNKPQMKYIIQESACY----VGLLKEEPALMAAVNAALTKAKKDHELN 248 >gi|266624831|ref|ZP_06117766.1| amino acid ABC transporter, amino acid-binding protein [Clostridium hathewayi DSM 13479] gi|288863292|gb|EFC95590.1| amino acid ABC transporter, amino acid-binding protein [Clostridium hathewayi DSM 13479] Length = 285 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 49/289 (16%), Positives = 90/289 (31%), Gaps = 48/289 (16%) Query: 1 MYKDFFVSILCL-IILFFTSFSTNASIL-------------------------------- 27 M K+ V + + + T+ ++ S Sbjct: 1 MKKNVLVLVAAVCMAAALTACGSSNSTAETTAAAAETTTADTAAGSTDTAADTAADTSAA 60 Query: 28 -GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 G + N + N G D D RA++ + +++ + Sbjct: 61 EETEGAGGKIVMVTNAEFPPYEYH-ENNTIVGIDADIARAIADQMG---MELEIQDMAFD 116 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 A+QS + D + R + F Q I+ + I++ + L+G Sbjct: 117 SLIPAIQSGKADFAAAGMTVNEERLR--NVDFTETYAEAAQVIIVKEGSAIAAPADLTGK 174 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 I VQ GTT ++ D A F + E A + DA D K+ Sbjct: 175 KIGVQTGTTGDIYADDVENA-----EVQRFNKGMEAVMALTQDKLDAVIIDR---EPAKV 226 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 IL + ++ A AI +G+TE + ++ + + EL Sbjct: 227 FVKENEGLKILDEAFTEEEYAIAIKKGNTELLDKMNAAIKELKESGELQ 275 >gi|110801606|ref|YP_697894.1| amino acid ABC transporter [Clostridium perfringens SM101] gi|110682107|gb|ABG85477.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens SM101] Length = 278 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 40/290 (13%), Positives = 94/290 (32%), Gaps = 30/290 (10%) Query: 1 MYKDFF-----VSILCLIILFFTSFST-------NASILGDIKKRGFLKCGINTGLVGFA 48 M K+ F V+++ + L + + IK+ G L G++ + Sbjct: 1 MKKNIFKKMLSVAMIGGLTLSLAGCGAKTAKENGSNDKVAKIKESGKLVVGLSADYAPYE 60 Query: 49 E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 G D+D + ++ + D ++ + ++++ ID+ Sbjct: 61 FHIMKDGKDQIVGLDIDIAKEVAKNLGVD---LEIKEMEFGAIIQSVKNGMIDMGISG-- 115 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADY 163 T + + F I Y QG +++K I + L G + Q G+ + Sbjct: 116 ITPDEKRKEAVDFSDIYYEAEQGILINKDNKESIKGIGDLKGKKVGAQMGS-----IQAE 170 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + + V + + + DA ++ A + V I + Sbjct: 171 IAKGIEGADVKLLDNVNTLILELKTGKLDAVITELP--VAKIASEVNSELAVADEVIKNS 228 Query: 224 S-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 A AI +G+ + + V+ T + ++ + ++ + Sbjct: 229 EGGSAIAIQKGNKDLVDEVNSTIKELKENGKIDQFTNDAIELVPYQKKEE 278 >gi|251788996|ref|YP_003003717.1| cationic amino acid ABC transporter periplasmic binding protein [Dickeya zeae Ech1591] gi|247537617|gb|ACT06238.1| cationic amino acid ABC transporter, periplasmic binding protein [Dickeya zeae Ech1591] Length = 259 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 76/219 (34%), Gaps = 13/219 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 +K G + F A+G GFD+D + L I + ++ + +L++K Sbjct: 27 IKIGTDPTYAPFESKDASGQLVGFDIDLAKELCKRI---QANCTFVESDFDALIPSLKAK 83 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154 +ID + + T R +AF Y I K I ++ L G + V + Sbjct: 84 KIDAIISSLSITEKR--QQEIAFTDKLYAANARLIAKKGSPIQPTLEALKGKRVGVLQAS 141 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T E Y++ + + ++ + I A + R D D A L ++ Sbjct: 142 TQEAYANQYWQPKGVD--VVAYQNQDLIYADLTSGRIDTAFQDEVAGSEGFLKQAAGKDY 199 Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAM 248 + L + + +TE + AM Sbjct: 200 AFAGPAVKDDKLFGVGTGMGLRKNETELKAALDKAFAAM 238 >gi|213586697|ref|ZP_03368523.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 180 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 64/178 (35%), Gaps = 11/178 (6%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 4 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63 Query: 58 GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ + +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 64 GYSQDYSNAIVEVVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F + G + K I L G ++ V +GTT+E+ L + M Sbjct: 124 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQKMGC 179 >gi|297580207|ref|ZP_06942134.1| arginine ABC transporter [Vibrio cholerae RC385] gi|297535853|gb|EFH74687.1| arginine ABC transporter [Vibrio cholerae RC385] Length = 243 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 82/258 (31%), Gaps = 27/258 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L+ + +K + F + N +GFD Sbjct: 1 MKKILLASLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + AL+ K+ D D T R + F Sbjct: 48 VDLANALCQQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ ++ + L G + VQ GTT + L + + + + Sbjct: 103 PYYDNSAAFVSLAG-KVADQAALKGKRVGVQNGTTHQSFLLE----QRSDVVAVPYSSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTEW 237 + + R D+ GD + + D E+ + + A+ + + Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEW-FKGDNKLEYVGERVTNPQYFGNGFGIAVNKDNQAL 216 Query: 238 YNIVSWTHYAMVTAEELG 255 + ++ A+ E Sbjct: 217 LDQLNAALEAVKENGEYA 234 >gi|218675046|ref|ZP_03524715.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli GR56] Length = 148 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 59/157 (37%), Gaps = 14/157 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + F + + + LF S + G ++ F V A+G +GFD+D Sbjct: 6 RIFAAASIAAMSLFAGSAMADGE---------KYVIGTDSTYPPFEFVDASGTIQGFDID 56 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +AL + + ++ ++ + AL +K+ D++ + T R + F Sbjct: 57 IAKALCAEM---KAECSFVSTDWDGIIPALNAKKFDMIVSSMSITPERLKL--VDFSNKY 111 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159 Y + K I+ V+ L G I Q TT Sbjct: 112 YNTPPAIAVPKDSKIADVAGLKGKVIGAQTSTTHANY 148 >gi|332040826|gb|EGI77198.1| extracellular solute-binding protein [Hylemonella gracilis ATCC 19624] Length = 256 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 83/260 (31%), Gaps = 24/260 (9%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + L ++ + F+ ++ G + F A G+ KG +++ + Sbjct: 1 MGCLVASVMSVSGFAHAQD---------VVRIGTLSDYAPFEYRDAKGELKGMEIELAKI 51 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + I +K +++ ++ AL++K+ID + T R+ + F + Sbjct: 52 MCKHI---QAKCEFVTIDFDALIPALKAKKIDAVVAQMSITDERKK--EVDFTDLFTLAP 106 Query: 127 QGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ GIS L G ++ V +G+T E L + + I Sbjct: 107 VQYVAKTGSGISDDPATLKGKTVGVYSGSTHETYLKKRLPKSTSGIATKSYPSQDPIWLD 166 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGDT---EW 237 A R A D + + + + ++ A+ +GD Sbjct: 167 LEAGRIQAALSDTTVAHEWLEKTGKAKGFALAGKPLNDLAIFGEGTGIAVRKGDPLRTRL 226 Query: 238 YNIVSWTH-YAMVTAEELGI 256 + AE + Sbjct: 227 NGAIKQVLSDGSFAAENKKV 246 >gi|295704922|ref|YP_003597997.1| sulfur-containing amino acid ABC transporter sulfur-containing amino acid-binding protein TcyJ [Bacillus megaterium DSM 319] gi|294802581|gb|ADF39647.1| sulfur-containing amino acid ABC transporter, sulfur-containing amino acid-binding protein TcyJ [Bacillus megaterium DSM 319] Length = 270 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 84/250 (33%), Gaps = 8/250 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGDWK 57 M K + + ++ + TNAS K + G T + G Sbjct: 1 MKKYWLFLLSIVVAVSVAGCGTNASSSAGEKNEKDVQTIVVGTGTQFPNICFIDDKGKLT 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+DV+ RA+ + D ++ + L+L+S +ID+++ N R+ Sbjct: 61 GYDVEVVRAIDKELKDYKF--EFKTMEFSNLLLSLESNKIDMIAHNMAQNAERKKKFLFN 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y + + I S+ L G + V A + + L Y + H K + Sbjct: 119 DETYNYSPLYVTVPKNRNDIHSLKDLEGKKMIVGATSNAAVYLDKYNQKHGNKIDVVYAG 178 Query: 178 R-VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + ++ + R DA ++ + + DI+ S + + D + Sbjct: 179 QGADDATTQLKTGRADATLATPFSIDFSNQALK--FQQKTVGDIVINSKVYFMFNKKDEK 236 Query: 237 WYNIVSWTHY 246 + V Sbjct: 237 LKSEVDQAIK 246 >gi|261883825|ref|ZP_06007864.1| Solute-binding protein/glutamate receptor [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 173 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 70/157 (44%), Positives = 99/157 (63%) Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RA+S+A+F DP K+ ++PL+ KERF ALQS +D+LS T WTL R+ +G+ F Y+ Sbjct: 1 RAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSCQTTWTLSRDAGMGIHFVGTAYY 60 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 DGQGF++ K G+ S +L GASIC + GTTTE +ADY AHN+KY P+V + + + Sbjct: 61 DGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYCGAHNIKYEPVVIDSADGLLK 120 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 A+ R D YT D ALYA +L P + + + Sbjct: 121 AFETGRGDVYTTDALALYAQRLILAEPDAYGVFSEGY 157 >gi|298293509|ref|YP_003695448.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] gi|296930020|gb|ADH90829.1| extracellular solute-binding protein family 3 [Starkeya novella DSM 506] Length = 261 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 69/230 (30%), Gaps = 13/230 (5%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 + A L IK+ G +K G F + GFDV+ R ++ + Sbjct: 21 GGAAVARADDLAAIKQAGVIKIGTEGTYPPFTYHDGSNQLVGFDVEIGREIAKRLGVKAE 80 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KK 135 +L L +++ D++ T R+ F I+ Sbjct: 81 ---FLEGKWDGLIAGLDARRYDVVINQVGITEARKA--KYDFSEPYIASKAVLIVADGND 135 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S L G Q+ T+ LA+ + A + + ++ R DA Sbjct: 136 AIKSFEDLKGKR-AAQSLTSNFGKLAEKYGA-----TLVGTDGFDQSIQLVLTGRADATL 189 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D + K I+ + + +G+ E ++ Sbjct: 190 NDSLSFLDFKKHRPDAKV-RIVAEEKDADHSGVILRKGNPELVAAINKAL 238 >gi|49474281|ref|YP_032323.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella quintana str. Toulouse] gi|49239785|emb|CAF26175.1| ABC transporter, periplasmic amino acid-binding protein [Bartonella quintana str. Toulouse] Length = 250 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 83/247 (33%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ + + + NA LK F+ + +N + GFD Sbjct: 1 MK---LLAAAIITSVTLFAQLANA---------KALKIATEAYYPPFSYIDSNNELHGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + + L L +K+ D + + T R + F Sbjct: 49 IDISYALCKKMNVE---CTLIKQDFDGIILGLLAKKYDAIIASLAPTQER--LQKIDFTN 103 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y I K GI S L G ++ VQ+ TT D++ + + + Sbjct: 104 AYYSTELVVIGSKVSGIKEISAKALQGKNLGVQSNTTQAAYAEDHYASEG--VNIKFYPT 161 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E++ ++R DA D + ++ +K P+A I Q D + Sbjct: 162 AIEVNRDLLSNRLDAVISDKLKALTWLENEGKDCCQLLGTIQGTKFPIAIGIRQNDNDLK 221 Query: 239 NIVSWTH 245 N + Sbjct: 222 NKFNKAI 228 >gi|84387891|ref|ZP_00990905.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio splendidus 12B01] gi|84377237|gb|EAP94106.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio splendidus 12B01] Length = 269 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 83/249 (33%), Gaps = 10/249 (4%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++L L + + ++ L I +RG L+ G++T V +A GD G Sbjct: 1 MKLFKTAITALLAL-AVSLPALASETPNLDKINERGSLRVGMST-FVPWAMRNKQGDLVG 58 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F++D + L+ ++++P +L SK+ D++ T R + F Sbjct: 59 FEIDVAKRLAQDSGWK---VEFVPTAWDGIIPSLLSKKFDVIIGGMSITEARAK--SVLF 113 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 G +K+ S V+ +A K + F+ Sbjct: 114 TEPYSHSGVQLAANKELAEGFTQISDFDSRRVKIAARRGAFTVQVARATFPKAKVLQFDD 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A + N + + + +SK A A+ G+T+ Sbjct: 174 DAQAFQEVLNGNAHAVIASSPKPEHEAIKNAD-TLFIPFEERLSKGNEAFAVRLGETDKA 232 Query: 239 NIVSWTHYA 247 + A Sbjct: 233 EFFNEWIKA 241 >gi|315037375|ref|YP_004030943.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus amylovorus GRL 1112] gi|312275508|gb|ADQ58148.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus amylovorus GRL 1112] Length = 494 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 87/265 (32%), Gaps = 29/265 (10%) Query: 1 MYK----DFFVSILCLIILFFT----SFST-----NASILGDIKKRGFLKCGINTGLVGF 47 M K F++I+ LI F +F+ + +++ IK+ L G + Sbjct: 1 MKKAKIIHLFLAIITLISTLFLFNQPTFAATKKVESGTVMKKIKQSKELVVGTSADYPPL 60 Query: 48 AE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 V N + G D++ + ++ + +K+ ++ +AL++ ++D++ Sbjct: 61 EFTTSVNGNTKYVGVDIELAKDIAKDL---HAKLVIKNMSFDSLLVALETGKVDMVISAM 117 Query: 105 DWTLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 R+ + F I Y + + + ++ Q G+ + Sbjct: 118 TPNPERKK--SVDFSKIYYKPSGEYFLINKRDQSKYRKIKDFADQTVGAQTGSIQYQLIQ 175 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 K ++ + A ++ + + ND V Sbjct: 176 SQMKK----SKVKGLGKINNLVLALKSGKMSGVVMEE-LTAKAYAQNDNSLMAVRSDLRE 230 Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHY 246 ++ A A+ +G + V+ T Sbjct: 231 QQAGNAVAVAKGQGDLVKAVNKTIN 255 >gi|107103384|ref|ZP_01367302.1| hypothetical protein PaerPA_01004454 [Pseudomonas aeruginosa PACS2] gi|116051896|ref|YP_789261.1| putative amino acid ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|218889851|ref|YP_002438715.1| putative amino acid binding protein [Pseudomonas aeruginosa LESB58] gi|254236770|ref|ZP_04930093.1| hypothetical protein PACG_02780 [Pseudomonas aeruginosa C3719] gi|115587117|gb|ABJ13132.1| putative amino acid ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|126168701|gb|EAZ54212.1| hypothetical protein PACG_02780 [Pseudomonas aeruginosa C3719] gi|218770074|emb|CAW25836.1| probable amino acid binding protein [Pseudomonas aeruginosa LESB58] Length = 263 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 79/226 (34%), Gaps = 13/226 (5%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 + G L+ GI F+ A G+ GFD D AL + + K Q++ Sbjct: 24 AVAADGNLRIGIEAAYPPFSFKTAEGELAGFDYDIGNALCAQM---QVKCQWIEQEYDGL 80 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147 +L+ ++ID + T R + F YF +M + + S SQL+G Sbjct: 81 IPSLKVRKIDAALSSITITEERRR--SVDFTHKYYFTPGRLVMKEGAQLDDSFSQLAGKR 138 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 I VQ G T + + + + +EI A R DA D L L Sbjct: 139 IGVQRGATADRFASAVLAKAG--AEVVRYTSQDEIYLDLVAGRLDATFADSIPLQTGFLD 196 Query: 208 NDRPSEHVIL-----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R + + A+ +GD E ++ A+ Sbjct: 197 TPRGKGYAFVGPEFKDPKYFGEGAGIAVRKGDAELVGKLNAAIDAI 242 >gi|331268244|ref|YP_004394736.1| amino acid ABC transporter substrate-binding protein [Clostridium botulinum BKT015925] gi|329124794|gb|AEB74739.1| amino acid ABC transporter, substrate-binding protein [Clostridium botulinum BKT015925] Length = 281 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 51/291 (17%), Positives = 103/291 (35%), Gaps = 34/291 (11%) Query: 1 MYK----DFFV--SILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGL 44 M K F + I+ + + + N S + IKK G L G Sbjct: 1 MLKGKKLKFIICSLIVTMGVTLLVGCGNKDDGNKNQAKNMSKIEQIKKSGKLVLGTCADY 60 Query: 45 VGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 + + GFD++ + ++ + ++ ++ L+++S ++D + Sbjct: 61 PPYEVHKIKDGKDEIVGFDIELAKEIAKDLGVK---LEIKDMDFDPLVLSVKSGKVDFVI 117 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELT 159 + T RE + F I Y Q I+ K ++ + LSG I Q + E Sbjct: 118 SGMNPTPAREK--EIDFSKIYYKAKQSVIIRKDDKNKLTDLQSLSGKKIGAQITSLQEKI 175 Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 + K N I +V E+ + + DA + A + Sbjct: 176 AKEDIKGAN----VISLGKVNELILGLKGKKTDAVIVEEPVAKAYVAKYPELMVAN-INV 230 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 A I +G ++ + V+ T + + E+ QK I++ S+++ + Sbjct: 231 GKPNEGSAVGIQKGSKDFVDSVNKTIDRLNSKNEM---QKMIDKASQESKD 278 >gi|315641120|ref|ZP_07896199.1| glutamine ABC superfamily ATP binding cassette transporter, binding/permease protein [Enterococcus italicus DSM 15952] gi|315483128|gb|EFU73645.1| glutamine ABC superfamily ATP binding cassette transporter, binding/permease protein [Enterococcus italicus DSM 15952] Length = 722 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 80/263 (30%), Gaps = 16/263 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F L I++ F S + + + G + F N ++ G D Sbjct: 1 MKKRLFFLTLFSIMMTFFLTSVKSVSADE----KTYQIGTDVTFAPFEFQNDNKEYVGID 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ D + L +QS Q+D + T R+ F Sbjct: 57 IDLLKAIAKDQGFD---VNIRALGFDSSIQGVQSGQLDGMIAGMSITDERKK--SFDFSD 111 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + ISS L G + + GT + L + + ++ Sbjct: 112 PYFDSGIQMAVKGDDTSISSYEDLKGKIVGAKVGTESATFLDENKDKYGY--TVKTYDDA 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWY 238 + A A D L + + ++ D + A+ + +TE Sbjct: 170 TGLYGAIDNGTVQAIFDDYPV---LGYAITKGQDLKLVGDAEKGNSYGFAVKKGQNTELL 226 Query: 239 NIVSWTHYAMVTAEELGITQKNI 261 + + + E N Sbjct: 227 EKFNAGLKKLKASGEYDKIVANY 249 Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 75/229 (32%), Gaps = 18/229 (7%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 K+ ++ F ++ ++ G DVD + ++ + I++ + A Sbjct: 269 KKDTYVIASDSAFAPFEFQNSSNEYVGIDVDLLKR-AAELQG--FNIEFKFIGFSAAVQA 325 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150 ++ Q D + T R+ F + G + K I S L G ++ Sbjct: 326 VEGNQADGMIAGMTITDERK--NSFDFSNAYFQSGIQIAVKKDNTSIKSYEDLKGKTVGA 383 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + GT + LA + K ++ +++ A + DA D + Sbjct: 384 KVGTESADFLAANKDKYGFK--VKNYDAADQLYEAVKVGAVDAIMDDYPVIGYAISQGQ- 440 Query: 211 PSEHVILPDIISKS---PLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255 L I+K A+ + ++E ++ + M E Sbjct: 441 -----ELATPIAKESGGEYGFAVKKGQNSELIDMFNEALAEMKRTGEYD 484 >gi|271966877|ref|YP_003341073.1| extracellular solute-binding protein [Streptosporangium roseum DSM 43021] gi|270510052|gb|ACZ88330.1| extracellular solute-binding protein family 3 [Streptosporangium roseum DSM 43021] Length = 294 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 90/302 (29%), Gaps = 40/302 (13%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL---------------------GDIKKRGFLKCG 39 M K + I + + + S ++K G L+ Sbjct: 1 MTKRLYSVIAVALAVSAFAGGCGRSSSGTDAGAGAASAAGKTAKDLVPEAVRKTGELRMA 60 Query: 40 INTGLVGFA-EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98 + G + G D D A+++ + K++ LQ+ + D Sbjct: 61 TSEGYPPMEMYKPGTQELTGVDPDLAAAIAAKLG---LKVKVTNAAFDGLIPGLQAGRWD 117 Query: 99 ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTT 156 ++ + T R + F + G ++ K I ++ L G ++ + G++ Sbjct: 118 MVMSSMSDTEERRA--AVDFVD-YFSAGGAIMVKKGNPEGIKTLEDLCGRTVVLAKGSSN 174 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 + K + E + + R A D ++ + Sbjct: 175 LAIGQRQDEKCAKKMQIMQSEDAPTGLLSIDSGRAVATIVDSPVAAMY---AKDTGKYDV 231 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA-------EELGITQKNINQVSKDTT 269 LP+ P A+ + +T + V+ + E+ G+ + +V +T Sbjct: 232 LPEQYDAGPWGIAVDRRNTALRDAVAKAMQELTADGGYKAVLEKYGVASNAVPEVMVNTK 291 Query: 270 NP 271 Sbjct: 292 PW 293 >gi|312278807|gb|ADQ63464.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus thermophilus ND03] Length = 240 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 30/233 (12%), Positives = 67/233 (28%), Gaps = 14/233 (6%) Query: 28 GDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 IK+ + + F V G D++ +A+ + +++ ++ Sbjct: 4 KTIKENKKIVVATESEFAPFEFKSLVNGKDTLVGADIELAKAIGKKLGVK---VEFSVMS 60 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQ 142 ++QS + DI T R+ F Y I+ K +S Sbjct: 61 FDNVLASVQSGKADIAIAGISVTDERKKV--YDFSDSYYTSENVVIVKKDKVNDFTSADS 118 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+ ++ Q G+ E + E+ ++ + A + + Sbjct: 119 LAKQTVGTQKGSVQETIAKKQLSKA----SVVSLASNGEMINELKSGQIQAVVLEKAIAE 174 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 ND + A AI +G + ++ + + Sbjct: 175 GYIAQNDDLTLASFNLKSDGSDAYAVAIRKGSDDLLKEINAVIKETKESGKFD 227 >gi|301059423|ref|ZP_07200344.1| bacterial extracellular solute-binding protein, family 3 [delta proteobacterium NaphS2] gi|300446459|gb|EFK10303.1| bacterial extracellular solute-binding protein, family 3 [delta proteobacterium NaphS2] Length = 296 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 40/268 (14%), Positives = 91/268 (33%), Gaps = 23/268 (8%) Query: 1 MYKD-FFVSILCLIILFFTSFSTN----ASI----LGDIKKRGFLKCGINTGLVGFAEVK 51 M K IL + +F+ T A + I + G L G + Sbjct: 22 MKKAGMLFGILLAMTIFWGCQHTQVDGGAGTPVTAMDRISESGQLVVGTAGSMPPLNMTT 81 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G G + + + ++ A+ + + + AL++ ++D++ + T R Sbjct: 82 KDGAVIGLEPEMAKMMAEAMGVKA---TFKTMPFSQLLPALEAGEVDMVMSDMTITGKR- 137 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVS----QLSGASICVQAGTTTELTLADYFKAH 167 ++ +AF + G+ F+ +K S+ + + G+T++ + + F Sbjct: 138 -NMKVAFVGPYFISGKTFLTTEKWVASAKQSEEVNNANTKLTALRGSTSQQFVEEVFPKA 196 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + E A + DA D + + + + + P+ Sbjct: 197 ----TLLPGKDYETCVAMVLDGKADAMIADYPICLLSVIRYPN-HKLISVVPPYTYEPIG 251 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG 255 AI + D N + + + EL Sbjct: 252 IAIQKNDILLANWLENFLDTLAGSGELK 279 >gi|71064873|ref|YP_263600.1| ABC basic amino acid transporter, periplasmic binding protein [Psychrobacter arcticus 273-4] gi|71037858|gb|AAZ18166.1| ABC basic amino acid transporter, periplasmic binding protein [Psychrobacter arcticus 273-4] Length = 309 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 78/283 (27%), Gaps = 24/283 (8%) Query: 2 YKDFFVSILCLIILFFTSF---STNASILGDIKKRGF---LKCGINTGLVGFAEVKANGD 55 K +++ L +L + +K + F+ A+G Sbjct: 11 KKALWLAPLSAAMLMLAGCNNSAAPVETTETDAATDVPLNIKIATESSYKPFSYTDADGK 70 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G++++ AL + + I + L +++ D T R+ Sbjct: 71 LIGYEIELVDALCAQMKAKCEVIS---QDWDGLIPGLNAQKFDAAIAGMSITPERKEV-- 125 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F + G I K + SV L G I Q T L D + + Sbjct: 126 VEFSDPYFHSGIILIGKKGDDV-SVDALKGQPIASQRSTVASQYLQD----KHADADIKL 180 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQGD 234 ++ + + R A D T V +I S + A +GD Sbjct: 181 YDTQDNAYLDLTSGRVRAMMSDKVTGIDWLKTEAGKDYEVKGQEISTSDDAMGIAFRKGD 240 Query: 235 TEWYNIVSWT-------HYAMVTAEELGITQKNINQVSKDTTN 270 Y +T G + Q + + Sbjct: 241 PLVAKFNKALAELKDNGTYDQITGSYFGTSSTTAAQKAVAAND 283 >gi|37676941|ref|NP_937337.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio vulnificus YJ016] gi|37201485|dbj|BAC97307.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio vulnificus YJ016] Length = 243 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 85/257 (33%), Gaps = 25/257 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L+ S NA+ +IK + F + N +GFD Sbjct: 1 MKKILLASLIGLV-------SANAAAQQEIK------FAMEATYAPFEYMDENNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + AL+ K+ D D T R +AF Sbjct: 48 VDLANALCKQL---DASCSFHNQAFDSLIPALKFKRYDAAISAMDITDAR--LEQVAFSD 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ ++ + L G + VQ G+T + L + + + + Sbjct: 103 AYYDNSAAFVSFAG-KVADQAALKGKRVGVQNGSTHQSFLLEQMA----GVTAVPYGSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238 + + R D+ GD + + + + + + A+ + + Sbjct: 158 DAFLDMKNGRIDSVFGDTAVVAEWFKKENNLAYVGEHVTNAQYFGNGFGIAVNKDNQALV 217 Query: 239 NIVSWTHYAMVTAEELG 255 + ++ A+ E Sbjct: 218 DQLNAALKAVKANGEYQ 234 >gi|33595379|ref|NP_883022.1| solute-binding periplasmic protein [Bordetella parapertussis 12822] gi|33599678|ref|NP_887238.1| solute-binding periplasmic protein [Bordetella bronchiseptica RB50] gi|33565457|emb|CAE40090.1| probable solute-binding periplasmic protein [Bordetella parapertussis] gi|33567275|emb|CAE31188.1| probable solute-binding periplasmic protein [Bordetella bronchiseptica RB50] Length = 276 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 81/256 (31%), Gaps = 15/256 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L + + + ++L + + ++ + L + + GF+ Sbjct: 11 MLKWLMAVPLALGL----AHAHAETVLEKARAKNEIRIATSDSLKPWGYMDDTNKPIGFN 66 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D R + + K+ ++ + K L + + D++ T R F Sbjct: 67 LDVSREMGKRMGF--GKVTFVTDSYKNFISGLNADRYDMVVAILTPTEERRK--SADFSN 122 Query: 121 ITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F+ I S+ L+G + V AGTT E + K V++ Sbjct: 123 PYMVVSKNIFVRDDNTSIRSLEDLAGKRLGVAAGTTDEAWARQHVK----DAQIRVYDNF 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 R DA D R + PD+ A A +G + Sbjct: 179 FLALQDLAIGRVDARITDRVTGMT-AAKEGRFPVKIAGPDLSQDIG-AIAYKKGQDDLAA 236 Query: 240 IVSWTHYAMVTAEELG 255 IV+ MV L Sbjct: 237 IVNKVIQEMVDDGSLN 252 >gi|256392566|ref|YP_003114130.1| extracellular solute-binding protein family 3 [Catenulispora acidiphila DSM 44928] gi|256358792|gb|ACU72289.1| extracellular solute-binding protein family 3 [Catenulispora acidiphila DSM 44928] Length = 320 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 80/254 (31%), Gaps = 16/254 (6%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + + + + +I RG L + +++G G DVD RA+ Sbjct: 52 ASAVGAGQVDPAARSQLPAEILARGVLTIATDPTYPPDEFRQSDGTLVGMDVDLARAVGV 111 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + ++Q+ + ++ +Q Q DI + T RE F + G Sbjct: 112 KLG---VRVQFNQVQFRDILAGVQQGQYDIGVSSITDTTRREEL--GDFV-TYFQAGSSL 165 Query: 130 IMHKKKGISSVSQ---LSGASICVQAGTTTELTL-----ADYFKAHNMKYHPIVFERVEE 181 ++ ++ L G + Q GT + A PIV + Sbjct: 166 LVKSGNPLTLYPDDESLCGHRVAAQDGTIEIDPVLSSRSAQCVADGLPPITPIVVAAEAD 225 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 AA R DA D AL T + D I K+P A+ + D + Sbjct: 226 SRAALLGGRADAMVEDAPI--ALYETAHSGGLLQVAGDQIDKAPYGFALAKEDKPMDTAI 283 Query: 242 SWTHYAMVTAEELG 255 ++ E Sbjct: 284 LRAMQDLIDDGEYA 297 >gi|167744402|ref|ZP_02417176.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei 14] Length = 250 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 93/283 (32%), Gaps = 39/283 (13%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + F +I+ L ++ ++ +A L G +T + F + + + GFD+ Sbjct: 3 RRSFIKTIVALALVGASAAGAHA---------KELVVGTDTSFMPFEFKQGD-KYVGFDL 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D ++ + P++ ALQ++ ID+ R + F Sbjct: 53 DLWAEIAK---GAGWTYKVQPMDFAGLIPALQTQNIDVALSGMTIKEERRK--AIDFSDP 107 Query: 122 TYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + I S+ L+G I + GT T D+ KAH F ++ Sbjct: 108 YYDSGLAAMVQANNTTIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A R DA D + + + +S +G Sbjct: 164 QAYLALEAGRVDAAMHDTPNVLFFVNNEGKGRA-KVAGAPVSGDKYGIGFPKGSP----- 217 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKS 282 A V AE + ++ D + +++ G + Sbjct: 218 ----LVAKVNAE--------LARMKADGRYAKIYKKWFGSEPP 248 >gi|148546669|ref|YP_001266771.1| cationic amino acid ABC transporter periplasmic binding protein [Pseudomonas putida F1] gi|148510727|gb|ABQ77587.1| cationic amino acid ABC transporter, periplasmic binding protein [Pseudomonas putida F1] Length = 261 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 82/254 (32%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L + S + LK GI FA + +G GFD Sbjct: 1 MKKLALLGALALSVFSLVSQADEKP----------LKIGIEAAYPPFAFKQPDGSIAGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + +K ++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCEEM---KTKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTK 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M +S L G I VQ G+ + + A + + Sbjct: 106 RYYLTPARLVMKDGTTVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKG--ATVVPYGTQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 EI A R D D + L L D + + + A+ +GD Sbjct: 164 NEIYLDVAAGRLDGTVADATLLEDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGD 223 Query: 235 TEWYNIVSWTHYAM 248 + ++ A+ Sbjct: 224 KANVDRINAAIDAI 237 >gi|260598729|ref|YP_003211300.1| histidine ABC transporter substrate-binding protein HisJ [Cronobacter turicensis z3032] gi|260217906|emb|CBA32481.1| Histidine-binding periplasmic protein [Cronobacter turicensis z3032] Length = 237 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 87/244 (35%), Gaps = 20/244 (8%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L+ G + F A G+ GFD+D + L I ++ ++ +L++K Sbjct: 5 LRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI---QTQCSFIEQPLDALIPSLKAK 61 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154 +ID + + T R+ +G F Y ++ K + ++ L G + V GT Sbjct: 62 KIDAIMSSLSITEKRQQEIG--FTDKLYAADSRLVVAKGSPVQPTLESLKGKRVGVLQGT 119 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T E ++ + ++ + I + A R DA D A L + Sbjct: 120 TQETYGNVHWAPKG--VEIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKGY 177 Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 I L + + D E ++ +A + A+ +++K Sbjct: 178 QFGGPSIKDEKLFGVGTGMGVRKEDNELREALNKA-FAEMRAD------GTYEKLAKKYF 230 Query: 270 NPDV 273 + +V Sbjct: 231 DFNV 234 >gi|183602518|ref|ZP_02963883.1| probable solute binding protein of ABC transporter system [Bifidobacterium animalis subsp. lactis HN019] gi|219683562|ref|YP_002469945.1| solute binding protein of ABC transporter system [Bifidobacterium animalis subsp. lactis AD011] gi|241190592|ref|YP_002967986.1| ABC transporter solute-binding protein [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195998|ref|YP_002969553.1| ABC transporter solute-binding protein [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218159|gb|EDT88805.1| probable solute binding protein of ABC transporter system [Bifidobacterium animalis subsp. lactis HN019] gi|219621212|gb|ACL29369.1| probable solute binding protein of ABC transporter system [Bifidobacterium animalis subsp. lactis AD011] gi|240248984|gb|ACS45924.1| ABC transporter solute-binding protein [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250552|gb|ACS47491.1| ABC transporter solute-binding protein [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289178330|gb|ADC85576.1| ABC transporter amino acid-binding protein [Bifidobacterium animalis subsp. lactis BB-12] gi|295793579|gb|ADG33114.1| ABC transporter solute-binding protein [Bifidobacterium animalis subsp. lactis V9] Length = 311 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 77/281 (27%), Gaps = 40/281 (14%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI---------------------------LGDIKKR 33 M K ++ +IL + T I + Sbjct: 9 MKKVAAFALGAAVILGSAACGTTDETQTAAKDSQNATSIVDSVKKDDKIAAMLPQKIAES 68 Query: 34 GFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 G L G+ V +G +G+DVD +AL+ + ++ + ++ Sbjct: 69 GKLTVGMEMTYAPAEFVAEDGKTPEGYDVDLAKALAKTLGVKAD---FISSSFDSIVPSV 125 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152 S + D+ T RE + F + L G I VQ Sbjct: 126 GS-KYDLGITAMTITEERE--DSVDFVSYYKAGSMWVVKKGNPDKVDAKNLCGTKIAVQV 182 Query: 153 GTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 GTT E + ++ + + D + D A + Sbjct: 183 GTTQEEDANKIKEQCAADGKAAVEVMPSKQQTDAATNVVTGKADVFYADSP--VAGYAIS 240 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 + L ++ AI +GDT+ V ++ Sbjct: 241 QTDGQLEELGEVEGTIKQGIAIKKGDTQLAEAVQAAMQHLM 281 >gi|172035229|ref|YP_001801730.1| solute-binding family protein 3 [Cyanothece sp. ATCC 51142] gi|171696683|gb|ACB49664.1| putative extracellular solute-binding protein, family 3 [Cyanothece sp. ATCC 51142] Length = 315 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 92/251 (36%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 MYK + L L+ + + A + + + G L LV +A V + G+ Sbjct: 19 MYKKMPLVALSLMAMLTLPNKSLAETVIERVARTGVLNVSTRVDLVPYAYVNDEDELVGY 78 Query: 60 DVDFCRAL----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 V+ + + I D + + ER +L ++++DI +T +T R+ Sbjct: 79 SVELIELIRETLAQEIGKDVQIKVIVDDSLDERISSLLNREVDIAC-DTTFTWQRDRF-- 135 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + + +SS I + + ++ + + Sbjct: 136 VDFSLAYGVSGIKVFVKEDSNLSSPDSFKNKRIAIIESVLSPESIKVIE----SQVTVVD 191 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGD 234 + +E A D + D + L + T P+ + ++PD +A + + D Sbjct: 192 VDSIEAGIKAVEDGEVDGFAFDGTILEGTRQTLTNPNAYKVVPDESYFKHGIACMVPEQD 251 Query: 235 TEWYNIVSWTH 245 + + N+V+ T Sbjct: 252 STFLNLVNLTI 262 >gi|322513147|ref|ZP_08066279.1| polar amino acid ABC superfamily ATP binding cassette transporter, binding protein [Actinobacillus ureae ATCC 25976] gi|322121079|gb|EFX92902.1| polar amino acid ABC superfamily ATP binding cassette transporter, binding protein [Actinobacillus ureae ATCC 25976] Length = 260 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 72/212 (33%), Gaps = 12/212 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K V + +I L ++ S L I +G + G F A+G G+ Sbjct: 1 MLKQLSVIAVSVIALATSATSLAKETLLERINAKGTIIVGTEGTYAPFTYHDASGKLTGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ RA++ + +++ L++ + D+++ T E Sbjct: 61 DVEVTRAVAEKLGVK---VEFKETQWDAMLAGLKADRFDLVANQVGLT-TPERQATFDKS 116 Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G ++ + I S + G Q ++ LA A+ + + Sbjct: 117 EAYSWSGAALVVRNDEEKIKQASDVKGVKTA-QTLSSNYGELARDNGAN-----IVPIDG 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + R DA D AL N + Sbjct: 171 MAQGLLLIQQKRADATFNDNLALLDYLKKNPK 202 >gi|257455732|ref|ZP_05620960.1| arginine-binding periplasmic protein 2 [Enhydrobacter aerosaccus SK60] gi|257446860|gb|EEV21875.1| arginine-binding periplasmic protein 2 [Enhydrobacter aerosaccus SK60] Length = 268 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 67/200 (33%), Gaps = 10/200 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ + V F+ ANG GF++D AL S K + + + LQ++ Sbjct: 48 IRIATESSFVPFSYKDANGKLIGFEIDLADALCSEA---KLKCEVISQDWDGLIPGLQAQ 104 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 + + T R +AF + + I K L+G S+ Q TT Sbjct: 105 KYHAIMAGMSDTAER--RQVVAFSDPYFTNNLVVIGKKGVE-KGADDLAGKSVGAQRSTT 161 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 LA F P +++ + + R D D + + T V Sbjct: 162 AAEYLAKNFPKA----TPKLYDTQDNAYLDLESGRTDLMISDSAPALSWLKTAKGQGFEV 217 Query: 216 ILPDIISKSPLAPAIIQGDT 235 I +A A+ Q D Sbjct: 218 KGQPINIDDKIAIALRQNDP 237 >gi|227820778|ref|YP_002824748.1| putative ABC transporter, periplasmic amino acid-binding protein [Sinorhizobium fredii NGR234] gi|227339777|gb|ACP23995.1| putative ABC transporter, periplasmic amino acid-binding protein [Sinorhizobium fredii NGR234] Length = 259 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 92/245 (37%), Gaps = 21/245 (8%) Query: 36 LKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 +K GI F ANG+W+G++V+F +A+ + D P+ AL + Sbjct: 26 IKVGIAAEPYPPFTSPDANGNWEGWEVEFMKAMCAEAKLD---CVITPVAWDGIIPALTA 82 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153 K+ID++ + T R + + F Y G + K + I + L+G ++ VQ Sbjct: 83 KKIDMIVGSMSITAERLKT--IDFSDKYYNTPTGIMGTKGEDIKPTPEGLAGKTLGVQVS 140 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 T + +F ++ +E + A R DA D AL A ++ Sbjct: 141 TVHQAYATKHFAPAG--VEVKEYQTQDEANQDLAAGRVDAVQADAIALEAFLKSDQGKEC 198 Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 ++ + + +G+TE + ++ A+ + SK Sbjct: 199 CDYKGEVAQDVDVLGPGVGVGLRKGETELKDKINAAIKAI-------RDNGTYDTFSKKY 251 Query: 269 TNPDV 273 + D+ Sbjct: 252 FDFDI 256 >gi|89073559|ref|ZP_01160081.1| arginine ABC transporter, periplasmic arginine-binding protein [Photobacterium sp. SKA34] gi|89050586|gb|EAR56072.1| arginine ABC transporter, periplasmic arginine-binding protein [Photobacterium sp. SKA34] Length = 242 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 88/248 (35%), Gaps = 28/248 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K SI+ L+ + DIK + F + N +GFD Sbjct: 1 MNKILLASIIGLVSSQAMA--------QDIK------FAMEATYAPFEYMDENNQIQGFD 46 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL + + + + AL+ K+ D D T R ++F Sbjct: 47 VDIAKALCKEM---DATCTFHNQSFDSLIPALKFKRYDAAISAMDITEAR--QQQVSFTQ 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + GFI K ++ V+ L+G + VQ G+T + L D + + + Sbjct: 102 PYYDNAAGFISIKG-KVADVAALNGKRVGVQNGSTHQNYLTDQM----SGVTTVPYTSYQ 156 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK---SPLAPAIIQGDTEW 237 + + R D+ GD + + +D +V P K + A+ + + E Sbjct: 157 DAFIDMKNGRIDSVFGDTAVIAEWLKKDDN-LAYVGKPVTNPKYFGNGFGIAVNKSNQEL 215 Query: 238 YNIVSWTH 245 ++ Sbjct: 216 VKQLNTAL 223 >gi|120555955|ref|YP_960306.1| extracellular solute-binding protein [Marinobacter aquaeolei VT8] gi|120325804|gb|ABM20119.1| amino acid ABC transporter substrate-binding protein, PAAT family [Marinobacter aquaeolei VT8] Length = 252 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 78/247 (31%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59 M + ++ + L + S +A L+ + V F + G+ GF Sbjct: 1 MSTKWLKTLGAGLALSVAATSVSAET---------LRVVTDPSFVPFEMMDQETGEMIGF 51 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D++ ++ D ++ ALQ+ +DI T RE + F Sbjct: 52 DMEIIAEVAERAGFDYD---LNTMDFNGIIPALQTGNVDIAIAGITITDEREEI--VDFS 106 Query: 120 PITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G + + +S L G + + G+T+ L K+ + + Sbjct: 107 DPYYDSGLRILVSQNNDNVDEMSDLEGMKVGTKIGSTSYDFL---MKSLDDNDGVTPYPG 163 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++ A + DA D + + + + A+ G ++W Sbjct: 164 SSDMYMALMSGAVDAVFYDAP-NVGYFASTRGKGKVKTVGPLYEGQQYGIALKNG-SKWV 221 Query: 239 NIVSWTH 245 V+ Sbjct: 222 GPVNEAL 228 >gi|158423075|ref|YP_001524367.1| ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] gi|158329964|dbj|BAF87449.1| ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] Length = 277 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 78/235 (33%), Gaps = 11/235 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 +A +IK RG + GI + V + G G D D R + + ++++ Sbjct: 28 PASAVTPEEIKARGKIIVGIQGDNPPWGFVTSEGKQDGIDADIARLYAKELG---VQVEF 84 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +PL R AL + ++D+L R + F + I K I S Sbjct: 85 MPLEVNNRIPALTTGRVDVLFATMAMLPERAK--AVQFSKPYVANAIVLIGPKSAEIKSN 142 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + ++ +I V G + + + ++ A + + A G+ Sbjct: 143 ADMAKFTIGVAKGAAQDTQVTKNAPS---GTTIRRYDGDAASIQALVSGQVQAVGGN--I 197 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 Y ++ +P E + K G+ E ++ + EL Sbjct: 198 FYIQRIEQAKPGEFENKLE-FQKLYNGACTRLGEKEINASINAFIDKIKANGELQ 251 >gi|237808338|ref|YP_002892778.1| cationic amino acid ABC transporter, periplasmic binding protein [Tolumonas auensis DSM 9187] gi|237500599|gb|ACQ93192.1| cationic amino acid ABC transporter, periplasmic binding protein [Tolumonas auensis DSM 9187] Length = 259 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 83/251 (33%), Gaps = 22/251 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V + + +IK+ ++ G+ G F A+G GFD Sbjct: 1 MKNFRKVMQFAALAFAVNVNAA------EIKE---IRFGVEPGYAPFEVKAADGSLTGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + +K +++ + +L++K+ID + T R + F Sbjct: 52 IDLGNEMCKRL---QAKCEWVESDFDGLIPSLKAKKIDAILSAMSITEQR--MQEIDFTN 106 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K GI + L G + V GTT E D +++ + ++ Sbjct: 107 KLYGTPARLVSAKGSGIQPTAESLQGKRVGVMQGTTAETYAKDNWQSKG--VELVAYQNQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + A + R D D L + + I+ + + D Sbjct: 165 DLVYADLVSGRIDTAFQDAVTAGESFLNKPQGEQFEYSGPEINDEKYFGVGAGIGVRKED 224 Query: 235 TEWYNIVSWTH 245 + ++ T Sbjct: 225 GALKDALNKTL 235 >gi|222080929|ref|YP_002540292.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725608|gb|ACM28697.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 269 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 73/243 (30%), Gaps = 8/243 (3%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + L T+ + A L +I + GIN L + +GFDVD Sbjct: 5 KTVCMLAGAACLALTAVAAEAHSLDEILSAKKIVVGINPNLPPLGRFNDKNEIEGFDVDV 64 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + L + + + + +++ +R L + + DI+ T R + + T Sbjct: 65 AKKLGEMLGVE---VSLVQVSSADRVPFLATGKADIVLGALTRTADRAKVIDFSLPIQTE 121 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 K + + GTT + D +F+ + Sbjct: 122 AISALVAKDKPYQTMDDLNSADVHLVEVRGTTPVDFVKDRLPKA----QVTLFDNYPDAV 177 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A+ R DA N VI S + QG+T + V+ Sbjct: 178 RAFEQGRGDAIVDV-VDYLGAYTKNYSAETRVITDKSASIDYDCIGLAQGNTALKSWVNV 236 Query: 244 THY 246 Y Sbjct: 237 ALY 239 >gi|320159032|ref|YP_004191410.1| arginine ABC transporterperiplasmic arginine-binding protein ArtI [Vibrio vulnificus MO6-24/O] gi|319934344|gb|ADV89207.1| arginine ABC transporter, periplasmic arginine-binding protein ArtI [Vibrio vulnificus MO6-24/O] Length = 243 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 85/257 (33%), Gaps = 25/257 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L+ S NA+ +IK + F + N +GFD Sbjct: 1 MKKILLASLIGLV-------SANAAAQQEIK------FAMEATYAPFEYMDENNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + AL+ K+ D D T R +AF Sbjct: 48 VDLANALCKQL---DASCSFHNQAFDSLIPALKFKRYDAAISAMDITDAR--LEQVAFSD 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ ++ + L G + VQ G+T + L + + + + Sbjct: 103 AYYDNSAAFVSFAG-KVADQAALKGKRVGVQNGSTHQSFLLEQM----SGVTAVPYASYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238 + + R D+ GD + + + + + + A+ + + Sbjct: 158 DAFLDMKNGRIDSVFGDTAVVAEWFKKENNLAYVGEHVTNAQYFGNGFGIAVNKDNQALV 217 Query: 239 NIVSWTHYAMVTAEELG 255 + ++ A+ E Sbjct: 218 DQLNAALKAVKANGEYQ 234 >gi|295400464|ref|ZP_06810442.1| extracellular solute-binding protein family 3 [Geobacillus thermoglucosidasius C56-YS93] gi|294977367|gb|EFG52967.1| extracellular solute-binding protein family 3 [Geobacillus thermoglucosidasius C56-YS93] Length = 276 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 86/258 (33%), Gaps = 20/258 (7%) Query: 1 MYKDFFVSILCLIILFFTSFST------------NASILGDIKKRGFLKCGINTGLVGFA 48 M K + + L+ F + S+ + ++K + G T Sbjct: 1 MNKKLSLIVALLLTFFLAACSSKEGATSTTSTANSKDTKEKVQK---IIVGTGTQFPNIC 57 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + NG G+DV+ R + + + ++ + L+L++K+ID ++ + Sbjct: 58 FIDENGKLTGYDVELVREIDKKL--PEYEFEFKTMEFSNLLLSLETKKIDFIAHQMEVNE 115 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R+ P F + + I S+ L G + V A + + L Y K HN Sbjct: 116 ERKAKFLFNKEPYNIFPLKVVVRKDNNDIKSIKDLKGKKVIVTATSNAAVFLEKYNKEHN 175 Query: 169 MKYHPIVFER-VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 H + + +++ R R DA T + V+ ++ Sbjct: 176 AGIHIVYAGQGADDVTNQIRTGRADA-TISTPFAVDFLNKAADAQQKVVGETLLDSKVY- 233 Query: 228 PAIIQGDTEWYNIVSWTH 245 + +T+ + Sbjct: 234 FLFRKDETKLQKRIDEAL 251 >gi|241895357|ref|ZP_04782653.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Weissella paramesenteroides ATCC 33313] gi|241871331|gb|EER75082.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Weissella paramesenteroides ATCC 33313] Length = 270 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 67/220 (30%), Gaps = 22/220 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-----------GDIKKRGFLKCGINTGLVGFAE 49 M K + + + L S S A + ++ K+G L G+ ++ Sbjct: 1 MNKYTKTAAVAAVTLMAASSSVYAVVPSVSAKSVPAYQKNLHKKGTLTVGLEGTYSPYSY 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 +G GF+VD +A++ + K++Y L S + D++ N T Sbjct: 61 RDKSGKLTGFEVDLSKAVAKKL---HLKVEYSQTKFDSLVAGLGSNKYDVVYNNMGKTKE 117 Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 R AF + I K I S + L G A + A Sbjct: 118 RAA--KYAFAAPYLYTKTVMITKKGSDIKSAADLKGKKSAQSASSNFGQ------AAKKA 169 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + + E + + D + K + Sbjct: 170 GTNVVSVPGFAEAIDLVNSGKADVTLNSQDSWGVYKKAHP 209 >gi|107027577|ref|YP_625088.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116693711|ref|YP_839244.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105896951|gb|ABF80115.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116651711|gb|ABK12351.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 267 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 86/254 (33%), Gaps = 22/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + L SF+ + + ++ GI+ F + +G GFD Sbjct: 1 MNRTAKLFATALAFAPLVSFAQDTAT---------IRWGIDPTYPPFEAKQPDGSLAGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +K ++ AL++++ D++ T R + F Sbjct: 52 IDLRNAICEQL---HAKCVWVEQGFDGMIPALRARKFDVIMSAMTATDER--LKQIDFSN 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + + S + L+G I + GTT E + + ++ Sbjct: 107 KLYASPGALVAPVGSKLLPSAASLAGKRIGIDQGTTQEAYAKAEWATKG--VTIVSYQNQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +++ R DA D + L R + ++ + + A I +GD Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTPRGKGYAFAGPDVTDARITGYGVAMGIRKGD 224 Query: 235 TEWYNIVSWTHYAM 248 + ++ A+ Sbjct: 225 ADMKKRLNDAIVAI 238 >gi|312112431|ref|YP_003990747.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y4.1MC1] gi|311217532|gb|ADP76136.1| extracellular solute-binding protein family 3 [Geobacillus sp. Y4.1MC1] Length = 276 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 87/258 (33%), Gaps = 20/258 (7%) Query: 1 MYKDFFVSILCLIILFFTSFST------------NASILGDIKKRGFLKCGINTGLVGFA 48 M K + ++ L+ F + S+ + ++K + G T Sbjct: 1 MNKKLSLIVVLLLTFFLAACSSKEGATSTTSTANSKDTKEKVQK---IIVGTGTQFPNIC 57 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 + NG G+DV+ R + + + ++ + L+L++K+ID ++ + Sbjct: 58 FIDENGKLTGYDVELVREIDKKL--PEYEFEFKTMEFSNLLLSLETKKIDFIAHQMEVNE 115 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R+ P F + + I S+ L G + V A + + L Y K HN Sbjct: 116 ERKAKFLFNKEPYNIFPLKVVVRKDNNDIKSIKDLKGKKVIVTATSNAAVFLEKYNKEHN 175 Query: 169 MKYHPIVFER-VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 H + + +++ R R DA T + V+ ++ Sbjct: 176 AGIHIVYAGQGADDVTNQIRTGRADA-TISTPFAVDFLNKAADAQQKVVGETLLDSKVY- 233 Query: 228 PAIIQGDTEWYNIVSWTH 245 + +T+ + Sbjct: 234 FLFRKDETKLQKRIDEAL 251 >gi|323358917|ref|YP_004225313.1| amino acid ABC transporter periplasmic protein [Microbacterium testaceum StLB037] gi|323275288|dbj|BAJ75433.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Microbacterium testaceum StLB037] Length = 268 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 76/269 (28%), Gaps = 29/269 (10%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDI----------KKRGFLKCGINTGLVGFAEVK 51 + V L + + + G L F+ + Sbjct: 3 RRRLTVLAATLGLSALALTACSGGTTAGATPGAGAEYGLVSDGTLTVATEGTYRPFSFHE 62 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 GD GFDV+ +A+ + ++++ F L + + D+++ R Sbjct: 63 GAGDLTGFDVEIAKAVGDKLG---LQVKFQETQWDAIFAGLDAGRFDVIANQVSINPER- 118 Query: 112 ISLGLAFRPITYFDGQGFI-MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 F + ISS + L+G + Q+ T+ LA A Sbjct: 119 -QQKYTFSDPYTVSRGVIVTTDSDTSISSFADLAGKTTA-QSLTSNWYELATQSGA---- 172 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 E + A + R DA D Y + P+ I S A A Sbjct: 173 -QVEAVEGWAQAVALLKQGRVDATINDQ-LTYLDYEKTNSPTGLKIAAQTDDTSESAFAF 230 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQK 259 +G + V+ EEL Sbjct: 231 KKGQDKLAEAVNGAL------EELRADGT 253 >gi|311112078|ref|YP_003983300.1| arginine ABC transporter binding protein [Rothia dentocariosa ATCC 17931] gi|310943572|gb|ADP39866.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Rothia dentocariosa ATCC 17931] Length = 277 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 78/223 (34%), Gaps = 11/223 (4%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 G L NT + F + NG G D D A++ + + + L Sbjct: 44 NGVLTVCTNTPYMPFEY-EENGKIVGIDADIANAIAKDLGAEAQLTSISF-EGLDSGTGL 101 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152 S Q DI T R+ + F + + D Q ++ K ISSV L A + Q Sbjct: 102 TSGQCDIALAGISVTDERKS--KMEFTDVYFEDNQAILVPKNSKISSVEDLKNAKVGAQQ 159 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 T+ E + + +E E + +A + + A + ++S + + S Sbjct: 160 ATSGESYAKE------KGADVVQYEDNELMFSALKTGQVQAVSANLSVISEALTKDPD-S 212 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + +A A+ + + T + ++ EL Sbjct: 213 FKIAYQTSENADQIAGAVAPEKKALLDKANKTIQQLKSSGELD 255 >gi|237732155|ref|ZP_04562636.1| arginine-binding periplasmic protein 2 [Citrobacter sp. 30_2] gi|226907694|gb|EEH93612.1| arginine-binding periplasmic protein 2 [Citrobacter sp. 30_2] Length = 243 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 72/218 (33%), Gaps = 16/218 (7%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G++ F + A+ GFD+D AL + ++ + AL+ Sbjct: 22 KISFGVSATYPPFESLDASNKIVGFDIDLATALCKQM---QAECTFTNHAFDSLIPALKF 78 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K+ D + D T R + F + ++ KK + + L G I ++ GT Sbjct: 79 KKYDAVISGMDITPERSKQVA--FTQPY-YANSALVIAKKDTYKTFADLKGKRIGMENGT 135 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T + L D + ++ + + R D GD + + T P Sbjct: 136 THQKYLQDKHPE----VKTVAYDSYQNAIIDLKNGRIDGVFGDTAVVNEWLKT--NPQLG 189 Query: 215 VILPDIISKSP----LAPAIIQGDTEWYNIVSWTHYAM 248 V + L A+ + ++ A+ Sbjct: 190 VATDKVTDPQYFGTGLGIAVRPDNKALLEKLNSALAAI 227 >gi|156934643|ref|YP_001438559.1| hypothetical protein ESA_02477 [Cronobacter sakazakii ATCC BAA-894] gi|156532897|gb|ABU77723.1| hypothetical protein ESA_02477 [Cronobacter sakazakii ATCC BAA-894] Length = 243 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 78/252 (30%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + + + G + F + A+ GFD Sbjct: 1 MKKIILAAMLAGVAFHAAAA-------------DKISFGSSATYPPFESLDASNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + AL+ K+ D + D T R+ + F Sbjct: 48 IDLAKALCKQM---QAECTFTNHAFDSLIPALKFKKYDAVISGMDITPERQKQVA--FTA 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++ KK S L G I ++ GTT + L D + ++ + Sbjct: 103 PY-YANSAIVIAKKGAYQSFDDLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + + P + L A+ + Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWL--KNNPQLGTASEKVTDPQYFGTGLGIAVRPDNVA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLKKLNDALAAI 227 >gi|118587811|ref|ZP_01545221.1| probable amino acid ABC transporter, substrate-binding protein [Stappia aggregata IAM 12614] gi|118439433|gb|EAV46064.1| probable amino acid ABC transporter, substrate-binding protein [Stappia aggregata IAM 12614] Length = 245 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 44/226 (19%), Positives = 90/226 (39%), Gaps = 11/226 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 + +A L DI + G +K F + + G+++G+D+D + ++ + + Sbjct: 1 MIASPASAE-LKDILEAGKIKIATPENFPPFGSLGSEGEYEGYDIDVAKMIAEDLGVE-- 57 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 ++ +P+ +K+R L++ + D++ R + F G Sbjct: 58 -LELVPVTSKQRIPFLETDKADLVIATLGANPERAK--SIWFSHAYAPFFSGAFAKPDVA 114 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 +S++ SG I V +GT +L + I F AAY + + D Sbjct: 115 VSTIDDFSGKKIAVTSGTLEDLAITADAPE---DAEIIRFGDNAATIAAYVSGQADVIVT 171 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 + AL ++ND P ++ II+ SP + G+ + V+ Sbjct: 172 GN--MVALGISNDNPDFNLENKFIIANSPSFIGVKTGNIDLLQWVN 215 >gi|257872221|ref|ZP_05651874.1| his/Glu/Gln/Arg/opine ABC transporter permease [Enterococcus casseliflavus EC10] gi|257806385|gb|EEV35207.1| his/Glu/Gln/Arg/opine ABC transporter permease [Enterococcus casseliflavus EC10] Length = 267 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 15/254 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + L IK G L + F + G D+D ++ + + + Sbjct: 23 ADNQLEAIKAAGVLNVATSADFAPFEFHALIDGKDTIVGADIDMVNEIADRLGVE---VN 79 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGI 137 L L+ ALQ + DI T R F + Q +++K Sbjct: 80 ILDLDFNAVLTALQQGKADIAVSGISATDER--KQTFDFTDNYFTPEQKLVVNKNNESAF 137 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S+ LSG + Q G+ E+ + D + +V + + D + Sbjct: 138 DSIESLSGKKVGAQKGSIQEMIVQDQLA----DSQLVSIAKVPNLVNELKQGSIDGLVLE 193 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG-I 256 + + ND + + A A+ +G TE ++ ++ + Sbjct: 194 SAVAESYVAQNDDLVITDVALEASEGDSYAIALPKGSTELQEELNSILKELIEDGTIDEY 253 Query: 257 TQKNINQVSKDTTN 270 QKN + +++ Sbjct: 254 VQKNTDLANENAAQ 267 >gi|261820369|ref|YP_003258475.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] gi|261604382|gb|ACX86868.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] Length = 274 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 90/244 (36%), Gaps = 12/244 (4%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 + F +A +L I RG + N A ++++G+ KG +D + Sbjct: 6 VALAASFIPTIAHADVLEKIADRGVISVCTNVNNPPLAFLESSGETKGLHIDLLNDFTQR 65 Query: 71 I---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + K+ +P+ R LQ + DIL + + R+ + P Y G Sbjct: 66 LSTQLGKTVKVDLVPVLPANRVQFLQQGKCDILFTSLTVSEERKKLVQFV-EPYYYAAGP 124 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + K S+ ++ G +IC G++ + L F A+ + F+ +E+D + R Sbjct: 125 ALLTKKGVTFSNWEEVKGKAICSNQGSSWNVPLEQKFGAN-----IVAFQTQQEVDQSLR 179 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILP---DIISKSPLAPAIIQGDTEWYNIVSWT 244 RC A D S L A L + ++ P A+ + ++ +S Sbjct: 180 DGRCAALVSDDSYLQARFLNDKEGIWKDYFIQNLTPFTEGPWGLAVRFNEPQFTQFISSV 239 Query: 245 HYAM 248 Sbjct: 240 IKDW 243 >gi|261368005|ref|ZP_05980888.1| glutamine transport system substrate-binding protein [Subdoligranulum variabile DSM 15176] gi|282569992|gb|EFB75527.1| glutamine transport system substrate-binding protein [Subdoligranulum variabile DSM 15176] Length = 286 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 79/213 (37%), Gaps = 9/213 (4%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G L N + +G ++G DV+ +A++ + ++Q ++ LA Q Sbjct: 62 GKLTMSTNAAFPPYEMTADDGSFEGIDVEIAQAIADKL---DLELQIDDMDFDAALLAAQ 118 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 + + D++ T R+ + F Q I+ + I+S+ ++G I VQ G Sbjct: 119 NGKSDMVMAGVTVTDERQTVM--DFSDTYANGIQVVIVPEDSDITSIDDMTGKMIGVQRG 176 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVE-EIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT +L +D + + A + D D + A + P Sbjct: 177 TTGDLYCSDTVENGGFGEENVTPYDNGLTAVQALMNGQVDCVVIDNA--PAQEFVKANPG 234 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 IL + A + +G+T+ + ++ Sbjct: 235 -LKILDTEYANEEYAIGVAKGNTQLLDAINGAL 266 >gi|218661455|ref|ZP_03517385.1| amino acid ABC transporter substrate-binding protein [Rhizobium etli IE4771] Length = 259 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 81/263 (30%), Gaps = 22/263 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V + +++ + A ++ ++ + F + AN +GFD Sbjct: 1 MRGALMVGGVAVVLAAVSPLPVAA------QEPMPMRVAVEGAFPPFNYLDANNKLQGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + Q++ + L + + D + + +L R +AF Sbjct: 55 IDIANALCE---TGKFECQFIIEKWDDMIPDLIAGKYDAIISSMSMSLER--RQKVAFTE 109 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y FI K IS S + LSG + V + T E ++ VF Sbjct: 110 KYYNSPSVFIARKDSPISDVSPAALSGKKLGVTSSTAQESYANHFYP----DMKKTVFRS 165 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-----LPDIISKSPLAPAIIQG 233 E+ R D D A+Y + + A+ Sbjct: 166 SPELYKGLSDGRVDIILEDKLAIYDWIANTKAGTCCAFKGPDLVDVTYFGEGAGIAVRLD 225 Query: 234 DTEWYNIVSWTHYAMVTAEELGI 256 D E ++ A+ + Sbjct: 226 DKERLARLNEALKAIKEDGTYDM 248 >gi|329115903|ref|ZP_08244620.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus parauberis NCFD 2020] gi|326906308|gb|EGE53222.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus parauberis NCFD 2020] Length = 288 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 91/270 (33%), Gaps = 16/270 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + + + L L L ++ S+N S I+K+G + G + + + Sbjct: 1 MKRHYALVGLGLAALTLSACSSNTSSQTSSWDKIEKKGVITVGTPKTYQPTSYMNDKNEL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G++VD + ++ + K++++ + F +L S ++D+ N D T R + Sbjct: 61 VGYEVDMMKEVAKRL---HVKVKFVETGFDQAFTSLDSGRVDLSINNFDVTKKRTTKYNM 117 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPI 174 + G + S LS A T + +A A + Y + Sbjct: 118 SEPYKYGVGGL-IVRADGTSGISKKDLSDWKGKKAAGAEGTESMKIAKKLGAKLVSYDNV 176 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISAL--YALKLTNDRPSEHVILPDIIS-KSPLAPAII 231 + R D D A + + + P ++ + D+ + + Sbjct: 177 ---SNDVYLNDVANGRTDFIPNDYPAQKLFVDFMKSQNPKMNIKMADVQYNPTEQGIVMS 233 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + D ++ T AM L + Sbjct: 234 KNDDSLLKEINKTIKAMKKDGSLKKISETY 263 >gi|153012084|ref|YP_001373295.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151563972|gb|ABS17466.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 296 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 80/270 (29%), Gaps = 17/270 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 +I I L + S NA ++ G +K + F + G+ Sbjct: 10 KNVMVFTIGAAISLLMITGSVNAQTAADSLPQKYRQSGVIKLVTDAKYPPFQSMNDAGEM 69 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GF+VD A+++ + + +QS + DI R+ + Sbjct: 70 VGFEVDLWNAIAARLNVKMDV---TSVAFDSLIPGVQSGRWDIAMEGITDNAERQKV--V 124 Query: 117 AFRPI-TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLAD-----YFKAHNMK 170 +F + K I+ L G Q+GT + A K Sbjct: 125 SFVDYGYTTSSAYILEQKGTDINDHLDLCGRKGSAQSGTEWVDMITKEIGDACVAAGKEK 184 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 F E + + R D + ++ + P + V + I+ + P A Sbjct: 185 PTVSEFGTSEATLLSVYSGRSDFVLTSAALAGEIQKSAPHPVKVVPMG-ILPRMPSGIAF 243 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 + + + + + + + N Sbjct: 244 RKNEADLGEALLAALKEVKASGDYDKIYAN 273 >gi|167821099|ref|ZP_02452779.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 91] Length = 240 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 77/233 (33%), Gaps = 6/233 (2%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 + I + +A L I + V F + GF D A+ Sbjct: 1 MAIAAIASSLIATLHARTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVV 60 Query: 69 ----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + +I Y+P+ + R L + D+ +T T R ++F ++ Sbjct: 61 DDVRKKLKMPGLQIAYIPVTRQNRNPLLVNDTYDLEGGSTTNTAAR--GQDVSFSMNLFY 118 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 G ++ K I + L+G ++ AG+T E + Y H++ + + Sbjct: 119 AGTRVLVKKASRIRGYADLAGKTVATAAGSTNENVIRKYAADHHLDIDVVPAKDYAAGPR 178 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D L+ ++ P + D + P + +GD Sbjct: 179 MVESDRTAVLALDDVLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDPAS 231 >gi|238920484|ref|YP_002933999.1| glutamine ABC transporter periplasmic protein [Edwardsiella ictaluri 93-146] gi|238870053|gb|ACR69764.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 248 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 70/212 (33%), Gaps = 12/212 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L +T V F K + + GFD+D A++ + P++ ALQ++ Sbjct: 27 LIVATDTAFVPFEFKKGD-KYVGFDIDLWDAIAKQL---HLSYTLKPMDFSGIIPALQTR 82 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGT 154 +D+ T R+ + F Y G ++ I V L G + V++GT Sbjct: 83 NVDLALAGISITEERKK--AIDFSDGYYNSGLMVMVKSGNAQIHGVKDLDGKVLAVKSGT 140 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 DY KAH F ++ R DA D + T + Sbjct: 141 AGV----DYAKAHVKSKDLRQFPNIDNAYLELATGRADAVLHDTPNILYFIQTAGNG-QF 195 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + D + A +G V+ Sbjct: 196 KAVGDSLEAQAYGIAFPKGSDALRGQVNDALK 227 >gi|259651118|dbj|BAI43280.1| amino acid ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 498 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 48/321 (14%), Positives = 98/321 (30%), Gaps = 32/321 (9%) Query: 1 MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + LI+ + + + G + F + + Sbjct: 13 MKRVWKWCVAGVAALILTLSLAMPVSTQA-----AKKTYVIGTDVTYAPFEFADKHNQYV 67 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D+D +A++ A + ++ PL AL++ QID + T R+ + Sbjct: 68 GIDIDLMQAIAKA---EGFRVDIKPLGFNAAVQALEAHQIDGVIAGMQITPERKQKFAM- 123 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y + K G++ + L G + ++ GT + + F+ Sbjct: 124 -SDPYYKTAVAMAVAKNSGVNQLKDLRGKRVALKTGTAAADF--AMSLKSKYGFSTVTFD 180 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE- 236 + A D L T + + S A +G ++ Sbjct: 181 DSNNMYQDVITGNSVACFDDKPVLQYAIAT---GLKLKLAGPESKASYYGFATQKGRSDE 237 Query: 237 --------WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288 + + YA + A+ LG + + + T + FLG+ + + Sbjct: 238 LDQKFNAGLKKVKADGTYAKIVAKYLGNGTQAAQKQTSAKTQDTDRSFLGLLRENWGTLM 297 Query: 289 LGLTKDWTYRIIR-----HMG 304 GL + I+ +G Sbjct: 298 NGLRETMVVTIVAIFFATAVG 318 >gi|119488108|ref|ZP_01621552.1| hypothetical protein L8106_11942 [Lyngbya sp. PCC 8106] gi|119455397|gb|EAW36536.1| hypothetical protein L8106_11942 [Lyngbya sp. PCC 8106] Length = 301 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 39/269 (14%), Positives = 94/269 (34%), Gaps = 23/269 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M +S+ L++ + A L + + G L+ G+ + F+ + +++G+ Sbjct: 1 MNTKITISLFSLLLTVGFQLPSLAETVLEKVNRTGVLRVGVREDAIPFSYSNESNNFEGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 V+ + + + ++Q P+ + RF ++++ +D++ T+ RE + Sbjct: 61 SVELMELIHLRLEQELNRSIQLQLKPVTIQNRFSSVENGTVDLVCGADSITVERE--QTV 118 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLS-----------GASICVQAGTTTELTLADYFK 165 F + G ++ ++ L I GTTT+ + Sbjct: 119 EFSIPFFTTGIQLLVQQENAERFDPTLRTEEELEQIAPGNVLIAFIQGTTTDTNFKPIYP 178 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL--PDIISK 223 + + + E +++ DA D L + L + +S Sbjct: 179 EADWQ----LLGSRTEGLRRLKSNEIDAIASDGILLIGEIWKQGEDMKSYRLIPQEPLSF 234 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 Q +T+W + ++ T + E Sbjct: 235 ENYGCIFPQNNTDWGSFINSTITSTENTE 263 >gi|330982619|gb|EGH80722.1| arginine/ornithine ABC transporter periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 179 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 64/196 (32%), Gaps = 18/196 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L +L F+ LK GI FA +G GFD Sbjct: 1 MKKLMLIGAMALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + K ++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M I S+++L G I VQ G+ E + + Sbjct: 106 KYYNSPARLVMKDGTTISDSLAELKGKKIGVQRGSIHERFAREVLAPKG--VEVTPYGSQ 163 Query: 180 EEIDAAYRAHRCDAYT 195 EI A R D Sbjct: 164 NEIYLDIGAGRLDGTV 179 >gi|313115990|ref|ZP_07801417.1| Tat pathway signal sequence [Faecalibacterium cf. prausnitzii KLE1255] gi|310621754|gb|EFQ05282.1| Tat pathway signal sequence [Faecalibacterium cf. prausnitzii KLE1255] Length = 279 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 90/274 (32%), Gaps = 42/274 (15%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA----------------------------SILGDIKK 32 M K S L L + + A L + + Sbjct: 1 MKKISRRSFLAAAGLSVAALALTACGGSSASTASSVASSAASSEAASTSAAAGELTTV-E 59 Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 G L N + G+++G D++ +A++ + ++Q ++ L++ Sbjct: 60 AGKLTMATNAAFPPYEMTTDAGEFEGIDIETAQAIADKLG---LELQIDDMDFDAALLSV 116 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152 Q + DI+ T R+ + F Q I+ + I+S L+G I Q Sbjct: 117 QQGKADIVMAGVTVTDERKAVM--DFSDSYATGIQSIIVPEGSDIASPDDLAGKKIGTQR 174 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GTT + +D F + + ++ A + DA D + A + P Sbjct: 175 GTTGYIYCSDDFG----DENVVAYDDGLTAVQALNNGQVDAVVIDNA--PAQEFIAANPG 228 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 IL ++ A + +G + + V+ Sbjct: 229 -LKILDTSYAEEDYAIGMAKG-SSLEDAVNAALK 260 >gi|78065769|ref|YP_368538.1| ABC transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77966514|gb|ABB07894.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 264 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 74/219 (33%), Gaps = 13/219 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F +G GFD+D A+ + + +K ++ + ALQ Sbjct: 30 KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KTKCVWVENDFDGLIPALQ 86 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152 +++ D ++ + T R+ +AF Y I + G + + L G + V Sbjct: 87 ARKFDAINSDMTITDQRK--HAVAFTDAIYTIPNQLIAKQGSGLLPTPQSLKGKRVGVLQ 144 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT E + + ++ + A ++ R DA D A LT + Sbjct: 145 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDAEAGSKGFLTKPQGQ 202 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246 +S + + + + D + Sbjct: 203 GFAFAGGTVSDAEILGSGVGFGLRKNDAALKTALDQALK 241 >gi|330502655|ref|YP_004379524.1| cationic amino acid ABC transporter periplasmic binding protein [Pseudomonas mendocina NK-01] gi|328916941|gb|AEB57772.1| cationic amino acid ABC transporter, periplasmic binding protein [Pseudomonas mendocina NK-01] Length = 257 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 70/230 (30%), Gaps = 13/230 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L+ GI FA +G GFD D AL + + +++ AL+ + Sbjct: 25 LRIGIEAAYPPFAFKTPDGQIAGFDYDIGNALCEEMKVE---CKWIEQEFDGLIPALKVR 81 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV-SQLSGASICVQAGT 154 + D + + T R+ + F Y M I L G I VQ + Sbjct: 82 KFDAVLSSMSITEDRKK--SVDFTGKYYATPAKLAMKAGTEIKDPLVDLKGKKIGVQRSS 139 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + D F + + E+ ++ R DA D + L D Sbjct: 140 VYDRYATDIFAPAG--AEIVRYSSQNEVFLDMQSGRLDATLADSVNIDDGFLKTDGGKGF 197 Query: 215 VILPD-----IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 + A+ +GD + +S A+ + Q Sbjct: 198 AFVGPDFTDVKYFGEGQGIAVRKGDKALADKISAAILAIRANGKYKEVQD 247 >gi|218676307|ref|YP_002395126.1| ABC transporter: Substrate binding protein precursor [Vibrio splendidus LGP32] gi|218324575|emb|CAV26093.1| ABC transporter: Substrate binding protein precursor [Vibrio splendidus LGP32] Length = 269 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 84/253 (33%), Gaps = 18/253 (7%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++L L + + ++ L I +RG L+ G++T V +A GD G Sbjct: 1 MKLFKTAITALLAL-AVSLPALASETPNLDKINERGSLRVGMST-FVPWAMRNKQGDLVG 58 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F++D + L+ ++++P +L SK+ D++ T R + F Sbjct: 59 FEIDVAKRLAEDSGWK---VEFVPTAWDGIIPSLLSKKFDVIIGGMSITEARAK--SVLF 113 Query: 119 RPITYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 G +K+ S I + G T + F + Sbjct: 114 TEPYSHSGVQLAANKELAEGFTQISDFDSRRVKIAARRGAFTVQVARETFPKAK----VL 169 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F+ + A + N + + + +SK A A+ G+ Sbjct: 170 QFDDDAQAFQEVLNGNAHAVIASSPKPEHETIKNAD-TLFIPFEERLSKGNEAFAVRLGE 228 Query: 235 TEWYNIVSWTHYA 247 T+ + A Sbjct: 229 TDKAEFFNEWIKA 241 >gi|114046425|ref|YP_736975.1| extracellular solute-binding protein [Shewanella sp. MR-7] gi|113887867|gb|ABI41918.1| extracellular solute-binding protein, family 3 [Shewanella sp. MR-7] Length = 244 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 72/228 (31%), Gaps = 17/228 (7%) Query: 31 KKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 K L G N F V + KGFD++ + ++ ++ + Sbjct: 23 KSNDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIELAKQIAKDAGK---TLKVENMKFDSL 79 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGAS 147 +AL S +ID ++ T R+ + F Y Q +++K I ++ + Sbjct: 80 IVALNSGKIDFIASGMTITPERQA--SVNFSEPYYEATQVLLVNKDNESIHTLDDIKDKH 137 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 VQ G+T + + + F E + + D D Sbjct: 138 FAVQLGSTAD------MMSKKYTQNVTAFNTGFEAIMELKNGKVDLVLFDSEPAANYLAK 191 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 N + ++ A+ + E N ++ T + + + Sbjct: 192 NP---DLKLIKLDFPPEFYGFAVSKQQPELLNSINNTLKNLKESGQYQ 236 >gi|291521638|emb|CBK79931.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Coprococcus catus GD/7] Length = 298 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 87/278 (31%), Gaps = 43/278 (15%) Query: 1 MYKDFFVSILCLIILFF--------------TSFSTNASILGDIKKR------------- 33 M K + + ++ + T+ S AS + Sbjct: 1 MKKGLALCMAAVLAMGCLLTGCGSSDTGAKSTTESAAASTEAVGTETAGTEAAGTETAGN 60 Query: 34 -GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 G + + NG++ GFD+D + + + K P++ + + L Sbjct: 61 GKTFTVGFDASFPPYGYQ-ENGEYVGFDLDLAQEVCDRNGWELVK---TPIDWDAKNIEL 116 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152 ID + + + P + Q F ++K GI + L+G ++ VQA Sbjct: 117 NGGSIDCIWNGFTMNGRED---DYTWTPAYINNTQVFAVNKNSGIKKAADLAGKNVLVQA 173 Query: 153 GTTTELTLADYFKA-----HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 ++ L D + E A DA D + Sbjct: 174 DSSALAALQDEENTDIKALADSFGSLTQVPDYESALMELEAGSADAVAMDEGVALTKQAQ 233 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 ND VIL D+IS+ A +G+ E + V T Sbjct: 234 NDN---IVILDDVISQEQYGIAFKKGNDELRDQVWSTL 268 >gi|258509858|ref|YP_003172609.1| ABC transporter glutamine-binding periplasmic protein [Lactobacillus rhamnosus GG] gi|257149785|emb|CAR88758.1| ABC transporter, glutamine-binding periplasmic protein [Lactobacillus rhamnosus GG] Length = 486 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 48/321 (14%), Positives = 98/321 (30%), Gaps = 32/321 (9%) Query: 1 MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + LI+ + + + G + F + + Sbjct: 1 MKRVWKWCVAGVAALILTLSLAMPVSTQA-----AKKTYVIGTDVTYAPFEFADKHNQYV 55 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D+D +A++ A + ++ PL AL++ QID + T R+ + Sbjct: 56 GIDIDLMQAIAKA---EGFRVDIKPLGFNAAVQALEAHQIDGVIAGMQITPERKQKFAM- 111 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y + K G++ + L G + ++ GT + + F+ Sbjct: 112 -SDPYYKTAVAMAVAKNSGVNQLKDLRGKRVALKTGTAAADF--AMSLKSKYGFSTVTFD 168 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE- 236 + A D L T + + S A +G ++ Sbjct: 169 DSNNMYQDVITGNSVACFDDKPVLQYAIAT---GLKLKLAGPESKASYYGFATQKGRSDE 225 Query: 237 --------WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288 + + YA + A+ LG + + + T + FLG+ + + Sbjct: 226 LDQKFNAGLKKVKADGTYAKIVAKYLGNGTQAAQKQTSAKTQDTDRSFLGLLRENWGTLM 285 Query: 289 LGLTKDWTYRIIR-----HMG 304 GL + I+ +G Sbjct: 286 NGLRETMVVTIVAIFFATAVG 306 >gi|227112026|ref|ZP_03825682.1| arginine-binding periplasmic protein 1 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 243 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 80/248 (32%), Gaps = 25/248 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K I+ + + + A ++ F V AN +GFD Sbjct: 1 MKK----LIVAALFAVGAASANAADT---------IRFATEASYPPFEFVDANNRIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + L+ ++ + + D T R ++F Sbjct: 48 IDLANALCKEM---QATCTFSNQAFDSLIPGLKFRRFEAVIAGMDITPER--QQQVSFTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K ++ ++ L+G + VQ GTT + L + + ++ + Sbjct: 103 PYYDNSAQFIAQKG-KVADIAALTGKRVGVQNGTTHQKYL----MEKHSDIKTVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD + + ND + + L A+ Q + E Sbjct: 158 NAVLDLKNGRLDAVFGDTAVVNEWLKQNDALATVGQKVTDKGYFGVGLGIAVRQNNDELL 217 Query: 239 NIVSWTHY 246 Sbjct: 218 KKFDTALN 225 >gi|322834166|ref|YP_004214193.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] gi|321169367|gb|ADW75066.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] Length = 264 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 37/257 (14%), Positives = 80/257 (31%), Gaps = 22/257 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + L+ G + F A G GF+ Sbjct: 1 MMKKTLAAAVMALTFGSALAHAEGET---------LRVGADLSYPPFQFRDAAGTPTGFE 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + K Y+ + +L +K++D +S R++ F Sbjct: 52 IDVTNAICKEM---KVKCDYVVSSFDAEIPSLIAKKVDFISPQGATEKRRKVIDFSDFV- 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + + + + L G I VQ G+ E+ +++ + + + + Sbjct: 108 -YHIPTKLVVQKGSPLLPTPESLQGKRIAVQQGSIQEMYANTFWQPKGVD--VVAYADQD 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 I A R D A+ L + + L + + +GD Sbjct: 165 TIYQDLVAGRLDGALSPAVAVTFGFLNKPEGKNFTLTGPEVRDDKLFSIGSSYGLRKGDD 224 Query: 236 EWYNIVSWTHYAMVTAE 252 +++ A + A+ Sbjct: 225 HIKKLLNDGL-AKIIAD 240 >gi|86144265|ref|ZP_01062597.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio sp. MED222] gi|85837164|gb|EAQ55276.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio sp. MED222] Length = 269 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 84/253 (33%), Gaps = 18/253 (7%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++L L + + ++ L I +RG L+ G++T V +A GD G Sbjct: 1 MKLFKTAITALLAL-AVSLPALASETPNLDKINERGSLRVGMST-FVPWAMRNKQGDLVG 58 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F++D + L+ ++++P +L SK+ D++ T R + F Sbjct: 59 FEIDVAKRLAEDSGWK---VEFVPTAWDGIIPSLLSKKFDVIIGGMSITEARAK--SVLF 113 Query: 119 RPITYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 G +K+ S I + G T + F + Sbjct: 114 TEPYSHSGVQLAANKELAEGFTQISDFDSRRVKIAARRGAFTVQVARETFPKAK----VL 169 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 F+ + A + N + + + +SK A A+ G+ Sbjct: 170 QFDDDAQAFQEVLNGNAHAVIASSPKPEHETIKNAD-TLFIPFEERLSKGNEAFAVRLGE 228 Query: 235 TEWYNIVSWTHYA 247 T+ + A Sbjct: 229 TDKAEFFNEWIKA 241 >gi|312866756|ref|ZP_07726970.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus parasanguinis F0405] gi|311097837|gb|EFQ56067.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus parasanguinis F0405] Length = 300 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 63/210 (30%), Gaps = 16/210 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L L + +A +K +T F ++ +KG D Sbjct: 1 MKKKLLACLLFLFPFVAFAGHAHAET---------IKVVFDTAYAPFEFKDSDQTYKGID 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ ++ D K A+Q+ Q D + T RE Sbjct: 52 VEILDKVAEINGWDLDK---SFPGFDAAVNAVQAGQADAIMAGMTKTTEREKV--FTMSD 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K I+ SQL G ++ V+ GT + L + K F+ + Sbjct: 107 TYYDTKVVIATKKADKITKYSQLKGKTVGVKNGTAAQRFLDKNKDKYGYK--IKTFDTGD 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + A DA D + Sbjct: 165 LMYNSLSAGAVDAVMDDQPVIQYAIQKGQD 194 >gi|91786595|ref|YP_547547.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91695820|gb|ABE42649.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 277 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 79/251 (31%), Gaps = 16/251 (6%) Query: 1 MYKDFFVSILCLII---LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + + L + L S +A L +I + G+N L + Sbjct: 7 MARRTLLVAGSLALGSTLLGLPASASARTLDEIVASKKIVIGVNPTLPPLGIFNDKNEID 66 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD R L + + + + +R + S +ID + T R+ + Sbjct: 67 GFDVDVARKLGELLGVKTE---IVQVGSPDRIPFVSSGKIDAVLGAMTITAERQKV--ID 121 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + + G + K K +L+ + G+T + ++ Sbjct: 122 FTVPLHTEVLGVLTTKAKPYKDWMELNDTAVRLVEVRGSTPVKLAQEKLPKA----QLLL 177 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + A R DA + + + T + I+ I A + +G+ Sbjct: 178 LDNYPDAVRAIAQGRADAMIDVMDFM--TEHTAKHKVDWRIVDAPIDVYFCAVGVQKGND 235 Query: 236 EWYNIVSWTHY 246 +S Sbjct: 236 ALREKLSGAIK 246 >gi|156934639|ref|YP_001438555.1| hypothetical protein ESA_02473 [Cronobacter sakazakii ATCC BAA-894] gi|156532893|gb|ABU77719.1| hypothetical protein ESA_02473 [Cronobacter sakazakii ATCC BAA-894] Length = 249 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 75/215 (34%), Gaps = 16/215 (7%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ F + A GFDVD AL I + + AL+ Sbjct: 28 TIRFATEASYPPFESMDAGNKIVGFDVDLANALCKEI---EATCTFTNQAFDSLIPALKF 84 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K++D + D T RE + F Y + F+ + K SS+ QL G + VQ GT Sbjct: 85 KRVDAVMAGMDITPEREK--QVLFTTPYYDNSALFVGLQGKN-SSIEQLKGKRVGVQNGT 141 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T + + D + ++ + + R DA GD + + P Sbjct: 142 THQKYITDKHPE----ITTVPYDSYQTARLDLQNGRIDAVFGDTAVVTEWL--KTNPKLA 195 Query: 215 VILPDIISKSP----LAPAIIQGDTEWYNIVSWTH 245 + + K L A+ QG+TE + Sbjct: 196 AVGDKVTDKDYFGTGLGIAVRQGNTELQQKFNTAL 230 >gi|145296749|ref|YP_001139570.1| hypothetical protein cgR_2653 [Corynebacterium glutamicum R] gi|140846669|dbj|BAF55668.1| hypothetical protein [Corynebacterium glutamicum R] Length = 344 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 83/220 (37%), Gaps = 12/220 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I RG + G++ + G+ +GF+V+ R +S IF DP+K+ + + + +R Sbjct: 89 IVNRGRIIVGVDQSQNLLSFRDPVTGELRGFEVELAREISRDIFGDPNKVDFRFVGSSDR 148 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 +L +DI+ R+ T R + F + + GI+S++ L G +I Sbjct: 149 LRSLDQGDVDIVIRSVTITDERAKL--VEFSTPYLRTQTRMLTMESSGITSIADLPGHTI 206 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 CV G+T+ + + A + H+ GD L + + Sbjct: 207 CVTDGSTSLQRARTIAPEA----SILKTRNWSDCLMALQQHQAQVILGDDVILSGIAAQD 262 Query: 209 DRPSEHVILPDIISKSPLAPAIIQG--DTEWYNIVSWTHY 246 IL + A +T+ ++ +Y Sbjct: 263 P---YTEILDTSLDSHSYGVAAASTTAETDSSGLIRQVNY 299 >gi|19553943|ref|NP_601945.1| ABC-type transport system, periplasmic component [Corynebacterium glutamicum ATCC 13032] gi|62391586|ref|YP_226988.1| ABC-type amino acid transport system, component [Corynebacterium glutamicum ATCC 13032] gi|21325522|dbj|BAC00144.1| ABC-type amino acid transport system, periplasmic component [Corynebacterium glutamicum ATCC 13032] gi|41326928|emb|CAF20772.1| ABC-type amino acid transport system, secreted component [Corynebacterium glutamicum ATCC 13032] Length = 344 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 83/220 (37%), Gaps = 12/220 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 I RG + G++ + G+ +GF+V+ R +S IF DP+K+ + + + +R Sbjct: 89 IVNRGRIIVGVDQSQNLLSFRDPVTGELRGFEVELAREISRDIFGDPNKVDFRFVGSSDR 148 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 +L +DI+ R+ T R + F + + GI+S++ L G +I Sbjct: 149 LRSLDQGDVDIVIRSVTITDERAKL--VEFSTPYLRTQTRMLTMESSGITSIADLPGHTI 206 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 CV G+T+ + + A + H+ GD L + + Sbjct: 207 CVTDGSTSLQRARTIAPEA----SILKTRNWSDCLMALQQHQAQVILGDDVILSGIAAQD 262 Query: 209 DRPSEHVILPDIISKSPLAPAIIQG--DTEWYNIVSWTHY 246 IL + A +T+ ++ +Y Sbjct: 263 P---YTEILDTSLDSHSYGVAAASTTAETDSSGLIRQVNY 299 >gi|117624499|ref|YP_853412.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli APEC O1] gi|218559222|ref|YP_002392135.1| histidine/lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|115513623|gb|ABJ01698.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli APEC O1] gi|218365991|emb|CAR03735.1| histidine/lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|323952102|gb|EGB47976.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia coli H252] Length = 260 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 89/244 (36%), Gaps = 20/244 (8%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ G + F + G+ GFD+D + L I ++ ++ +L++K Sbjct: 28 IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKAK 84 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154 +ID + + T R +AF Y ++ K I +V L G I V GT Sbjct: 85 KIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRIGVLQGT 142 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T E +++ + + ++ + I + A R DA D A L ++ Sbjct: 143 TQETFGNEHWAPKGI--EIVSYQGQDNIYSDLTARRIDAAFQDEVAASEGFLKQPVGKDY 200 Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + L + + D E ++ +A + A+ +++K Sbjct: 201 KFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKYF 253 Query: 270 NPDV 273 + DV Sbjct: 254 DFDV 257 >gi|257460304|ref|ZP_05625407.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257442369|gb|EEV17509.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 262 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 103/247 (41%), Gaps = 17/247 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F ++ L L L A+ L IKK ++ G+ F+ + +G ++GF++ Sbjct: 2 KVFVLAALLLGFLS-------ANSLDQIKKDRLVRIGVYNDQPPFSAL-VDGKYRGFEIA 53 Query: 63 FCRALSSAIFDD-PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 L IF D P K++++P+ A R ALQ + D++ T R + F Sbjct: 54 LGEKLGKEIFGDNPGKVKFIPITASRRISALQRNEADMVIATFTPTPARAK--KVDFSEP 111 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + G + K + ++S QL I V + + ++ + K + + Sbjct: 112 YFKVQVGVLAKKDENVTSFDQLRKKRIFVIKHS----PIHNFLRKAGFKKNLNFCASSAK 167 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A++ + + D L+A + +++ V+L + ++ A A+ +G+ ++ Sbjct: 168 CYRAFKRAKNAVHVDDNLILHAYAIIDNK--TQVVLDGLGKQTYNAIAVQKGNNALLELI 225 Query: 242 SWTHYAM 248 + + + Sbjct: 226 NTSLAGL 232 >gi|239833592|ref|ZP_04681920.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] gi|239821655|gb|EEQ93224.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] Length = 292 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 78/259 (30%), Gaps = 20/259 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + IL + L + ++ + N G + + + GFD Sbjct: 18 MRKIITIMGIAGAILATGFTAHAGETLDRVMEKKAMVVATNAGWPPQSFLDDSNQLVGFD 77 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + + + + + D+ + T R + + F Sbjct: 78 VDVANEIGKRLG---VAVSFETPDWATLTGGRWQGRYDVGVGSVTPTKAR--ANVIDFAG 132 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE--- 177 I Y+ +++HK SV+ L G I V+ TT+E + PI ++ Sbjct: 133 IYYYSPYVYVVHKDSEAKSVADLKGKVIGVETATTSEDYARHQLEIDAPGLPPIEYKLEP 192 Query: 178 -------RVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 R R DA A + ++ D + PL Sbjct: 193 GEIRTFADSMLPFDDLRLGDGVRIDAIV--APEQTAQNAIKNGYPVKILEGDYAFREPLV 250 Query: 228 PAIIQGDTEWYNIVSWTHY 246 + D EW + Sbjct: 251 VIAEKNDPEWTAKIGEIIK 269 >gi|171317824|ref|ZP_02907003.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171096989|gb|EDT41857.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 264 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 69/221 (31%), Gaps = 13/221 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F +G GFD+D A+ + + K ++ + ALQ Sbjct: 30 KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KVKCVWVENDFDGLIPALQ 86 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152 +++ D ++ + T R+ +AF Y I + G+ + L G + V Sbjct: 87 ARKFDAINSDMTITDQRK--HAIAFTDPIYTIPNQLIAKQGSGLQPTPQALKGKRVGVLQ 144 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA-YTGDISALYALKLTNDRP 211 GT E + + ++ + A ++ R DA + + Sbjct: 145 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGSKGFLSKPQGQ 202 Query: 212 SEHVILPDIISKSPL----APAIIQGDTEWYNIVSWTHYAM 248 + L + + D + + Sbjct: 203 GFGFAGGTVTDAEILGSGVGFGLRKNDAALKTALDQALKGL 243 >gi|28899839|ref|NP_799444.1| putative cyclohexadienyl dehydratase signal peptide protein [Vibrio parahaemolyticus RIMD 2210633] gi|153839887|ref|ZP_01992554.1| cyclohexadienyl dehydratase [Vibrio parahaemolyticus AQ3810] gi|260901310|ref|ZP_05909705.1| prephrenate dehydratase [Vibrio parahaemolyticus AQ4037] gi|308094376|ref|ZP_05888873.2| prephrenate dehydratase [Vibrio parahaemolyticus AN-5034] gi|308095442|ref|ZP_05905921.2| prephrenate dehydratase [Vibrio parahaemolyticus Peru-466] gi|308125390|ref|ZP_05775000.2| prephrenate dehydratase [Vibrio parahaemolyticus K5030] gi|28808091|dbj|BAC61328.1| putative cyclohexadienyl dehydratase precursor signal peptide protein [Vibrio parahaemolyticus RIMD 2210633] gi|149746595|gb|EDM57583.1| cyclohexadienyl dehydratase [Vibrio parahaemolyticus AQ3810] gi|308087930|gb|EFO37625.1| prephrenate dehydratase [Vibrio parahaemolyticus Peru-466] gi|308090422|gb|EFO40117.1| prephrenate dehydratase [Vibrio parahaemolyticus AN-5034] gi|308109884|gb|EFO47424.1| prephrenate dehydratase [Vibrio parahaemolyticus AQ4037] gi|308114185|gb|EFO51725.1| prephrenate dehydratase [Vibrio parahaemolyticus K5030] Length = 258 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 77/245 (31%), Gaps = 14/245 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K F +CL+++ + S L +I +G L+ G ++GF Sbjct: 1 MKKILFALGICLLMVTQVVHAQ--SRLQEILDKGVLRVGTTGDWNPMTMKDPATNSYRGF 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D L+ + ++Y+ + K + + + D ++ + + R G + Sbjct: 59 DIDVTTELAKDLGVK---VEYVATDWKTLVNGITANKYD-ITGSASLNMSRAKVAGYSQP 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 S + GT E + ++F + IV E Sbjct: 115 YFYLAFVPVVQKKDLAKFSDWEDFNKPDVKVAATLGTVQEKMVKEFFPSAQH----IVIE 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A R D L + V + +P+A + Q D W Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVDKFKQ-LAIVPVKAPRRPTPIAMLLPQDDQVW 229 Query: 238 YNIVS 242 N ++ Sbjct: 230 INYIN 234 >gi|307299246|ref|ZP_07579047.1| extracellular solute-binding protein family 3 [Thermotogales bacterium mesG1.Ag.4.2] gi|306915042|gb|EFN45428.1| extracellular solute-binding protein family 3 [Thermotogales bacterium mesG1.Ag.4.2] Length = 255 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 52/250 (20%), Positives = 97/250 (38%), Gaps = 22/250 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L + L F S++ D+K+RG L+ G + G + +GD G + Sbjct: 1 MKKLLLVLVLLCMTLAF------GSLIDDVKQRGVLRVGQDAGYMPLYGTNPDGDRIGLE 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + K++++ +N AL S + DI+ T R +L + F Sbjct: 55 VDILKKMAEIL---DVKLEFVVVNWDGIIPALVSNKFDIIWSAMTITPER--ALRVNFTD 109 Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVF 176 GQ + +K + + L+ I VQ G+T +F Sbjct: 110 PYLTVGQIILYNTNKYELPPTEEDLNDPDVKIAVQLGSTGAEAANRLLSEA----QIFMF 165 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E ++E + R DA D + + + + D++++ AI +GD E Sbjct: 166 ETIDEAAFQVASGRADAMIFDSI---YARFMAKKYDQLEVTEDLLTREDFGVAIPKGDFE 222 Query: 237 WYNIVSWTHY 246 ++ Sbjct: 223 TLQWMNTFIQ 232 >gi|256027816|ref|ZP_05441650.1| amino acid-binding protein [Fusobacterium sp. D11] gi|289765769|ref|ZP_06525147.1| amino acid-binding protein [Fusobacterium sp. D11] gi|289717324|gb|EFD81336.1| amino acid-binding protein [Fusobacterium sp. D11] Length = 251 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 86/262 (32%), Gaps = 23/262 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + ++ L+ + + K + G N F + GFD Sbjct: 1 MKKFFKLMLMSLLSVVISISVFA--------KSNVVYVGTNAEFAPFEYL-EKNKIVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+S + + + ALQ+K+ID++ T RE +AF Sbjct: 52 IDLLDAISKETG---LEFKIQDMAFDGLLPALQTKKIDMVIAGMSATPEREK--AVAFSK 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q I + S LSG + V G T + ++ F Sbjct: 107 PYFKAKQVVITKGVDKSLKSFKDLSGKKVGVMLGFTGDTVVSKI-----KGVKIERFNAA 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A ++ DA D A K T + + VI + A A + D E N Sbjct: 162 YAAILALSQNKVDAVVLDSE--PAKKYTANN-KQFVIANIPAEEEDYAIAFRKNDKELIN 218 Query: 240 IVSWTHYAMVTAEELGITQKNI 261 V+ + E KNI Sbjct: 219 KVNAALDKIKANGEYDKILKNI 240 >gi|260597264|ref|YP_003209835.1| Arginine-binding periplasmic protein 2 [Cronobacter turicensis z3032] gi|260216441|emb|CBA29553.1| Arginine-binding periplasmic protein 2 [Cronobacter turicensis z3032] Length = 243 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 79/252 (31%), Gaps = 29/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + L + + G + F + A+ GFD Sbjct: 1 MKKIILAAMLAGVALHAAAA-------------DKISFGSSATYPPFESLDASNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + AL+ K+ D + D T R+ + F Sbjct: 48 IDLAKALCKQM---QAECTFTNHAFDSLIPALKFKKYDAVISGMDITPERQKQVA--FTA 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++ KK S L G I ++ GTT + L D + ++ + Sbjct: 103 PY-YANSAIVIAKKGAYKSFDDLKGKRIGMENGTTHQKYLQDKHPE----VKTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 + R D GD + + + P + L A+ + Sbjct: 158 NAIIDLKNGRIDGVFGDTAVVNEWL--KNNPQLGTATEKVTDPQYFGTGLGIAVRPDNVA 215 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 216 LLKKLNDALAAI 227 >gi|297153789|gb|ADI03501.1| serine/threonine protein kinase [Streptomyces bingchenggensis BCW-1] Length = 669 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 65/203 (32%), Gaps = 8/203 (3%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 + GI G G + GFDVD ++ A+ +P+ I++ + +R L+ Sbjct: 438 KKITIGIKFDQPGLGFKTPAGRYSGFDVDVATYIAKALGHNPADIEWKETLSSDREAVLE 497 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPIT-YFDGQGFIMHKKKGISSVSQLSGASICVQA 152 ++D + T RE + F I + + L+G +C Sbjct: 498 RGEVDFIVAAYAVTDAREK--KVDFAGPYLEAHQDVLIRGDDTSVRTAQDLNGRRVCAPT 555 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 G+ + L + F + + + DA T D + L Sbjct: 556 GSVSALNVRTKFA---PQAQVSERATYALCLSDLKDGAVDAVTADDAILAGYAAREPDSF 612 Query: 213 EHVILPDIISKSPLAPAIIQGDT 235 E L ++ + +G Sbjct: 613 ELGGL--AMTDERYGIGVAKGSP 633 >gi|170751307|ref|YP_001757567.1| extracellular solute-binding protein [Methylobacterium radiotolerans JCM 2831] gi|170657829|gb|ACB26884.1| extracellular solute-binding protein family 3 [Methylobacterium radiotolerans JCM 2831] Length = 261 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 65/225 (28%), Gaps = 13/225 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L I+ L+ G F A+G GFDV+ R ++ + P Q+L Sbjct: 29 DDLDAIRAAKTLRIGTEGTYAPFTFHDASGQLVGFDVEIGRKVAEQLGVTP---QFLEGK 85 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQL 143 L K+ D++ T R+ F I + I S + L Sbjct: 86 WDGLIAGLDGKRYDVVINQVGITKERQA--KFDFSEPYIRARAVLITRADRSDIKSFADL 143 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G Q+ ++ LA+ A + + ++ R DA D + Sbjct: 144 KGKK-AAQSLSSNFARLAEQSGA-----ELVGTDGFDQSVQLVLTGRADATVNDSLSFLD 197 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 I + + + + + A+ Sbjct: 198 FHKQKPNAPV-KIAAEQADADASGIIMRKNNPALKAAIDKALEAI 241 >gi|269956046|ref|YP_003325835.1| extracellular solute-binding protein family 3 protein [Xylanimonas cellulosilytica DSM 15894] gi|269304727|gb|ACZ30277.1| extracellular solute-binding protein family 3 [Xylanimonas cellulosilytica DSM 15894] Length = 282 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 79/227 (34%), Gaps = 12/227 (5%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 + N + G +K G+ G D GFDVD ++ + Sbjct: 20 SACSSGTPGENGTTGD---AEGSIKIGVKFDQPGLGFQDGA-DHTGFDVDVATYVAEKLG 75 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +IQ++ + +R LQ+ Q+D++ T R+ + F + GQ ++ Sbjct: 76 YSVDQIQWVESPSAQREQMLQTGQVDMIFATYSITDARKEV--IDFAGPYFVAGQDLLVA 133 Query: 133 KKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA--H 189 I+ L+G ++C G+T+ + D H + + E A A Sbjct: 134 ADNTDINGPEDLAGKNLCSVTGSTSAQKIKD---EHADTVNLLERPGYAECVTALVAANA 190 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 DA T D L L T+ + ++ S + +G Sbjct: 191 EIDAVTTDDIILAGLAATDANRGKVKVVGAPFSTERYGVGLPKGSDR 237 >gi|152971238|ref|YP_001336347.1| lysine-, arginine-, ornithine-binding periplasmic protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150956087|gb|ABR78117.1| lysine-, arginine-, ornithine-binding periplasmic protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 247 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 85/244 (34%), Gaps = 20/244 (8%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ G + F+ A GD+ GFD+D L S I K ++ + +L++K Sbjct: 15 IRIGTDATYAPFSSKDAKGDFVGFDIDLGNELCSRI---KVKCTWVGSDFDSLIPSLKAK 71 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154 +ID + + T R +AF Y I K I ++ L G + V G+ Sbjct: 72 KIDAIISSLSITEKR--QQEIAFSDKLYAADSRLIAAKGSPIQPTLEALKGKHVGVLQGS 129 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T E D +++ + + ++ + I + A R DA D A L + Sbjct: 130 TQEAYANDRWRSQGVD--VVAYQNQDLIYSDLAAGRLDAALQDEVAASEGFLKQPAGKDF 187 Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + + + D E E+ ++++K Sbjct: 188 AFAGPSVKDKKYFGDGTGIGLRKDDAELKAAFDKAL------GEMRKDGT-YDKMAKKYF 240 Query: 270 NPDV 273 + +V Sbjct: 241 DFNV 244 >gi|254250416|ref|ZP_04943735.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] gi|124879550|gb|EAY66906.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] Length = 280 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 52/234 (22%), Positives = 84/234 (35%), Gaps = 11/234 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDP 75 F+ + S L I +R + G+ F + GF+VD ++ + D Sbjct: 23 FSGVARADSTLDRIHQRHKIAIGVILSGPPFGSLDPATQKPVGFNVDLANDVAKRLGVD- 81 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 ++ P+ R LQ ++D L N + T R L A P F G I K Sbjct: 82 --VELTPVQPSNRVQFLQQGKVDALIANMELTTERAEILSYAPTPF-EFIGGALIARKDS 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 GI + + + G +CV G+ LA + A F E A R + C A Sbjct: 139 GIKTWADVRGKPVCVSQGSNYTKPLATEYGA-----QVKAFRGQPESLLALRGNNCVAAV 193 Query: 196 GDISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 L L N ++ LP + SP + +G+T+ + + Sbjct: 194 HVAPTLRMLVARNPDWKDYATPLPTDLIPSPAVIWVRKGETDTQSALDRIVQDW 247 >gi|283458862|ref|YP_003363508.1| amino acid ABC transporter/signal transduction system periplasmic protein [Rothia mucilaginosa DY-18] gi|283134923|dbj|BAI65688.1| ABC-type amino acid transport/signal transduction system, periplasmic component [Rothia mucilaginosa DY-18] Length = 272 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 33/241 (13%), Positives = 81/241 (33%), Gaps = 11/241 (4%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++L +S +++ + L IK G ++ G+ F+ ++NG GF+ + Sbjct: 19 LAALLAACGSSSSSTASSTNKLEAIKSAGKIRVGLEGTYRPFSFHESNGTLVGFEKEIAD 78 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + ++ + + + DI+ N T R F + Sbjct: 79 LIAKDLGVTAE---FVETPWDSLIAGVDADRYDIVINNVSATDER--KQKYDFSVPYLYS 133 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + K + +VS++SG S + +A +V +E Sbjct: 134 EPKVAVKKDSSLQNVSEISGHSSAQSETS----NFRKMVEAKGAS--IVVVSGFDEAIEQ 187 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + R + D + + + ++ D+ + S + + +G N + + Sbjct: 188 VLSGRAEMTANDSVSFAEYFKEHPDANLRLLSGDLGTGSNSSILMAKGQDALRNAIDESL 247 Query: 246 Y 246 Sbjct: 248 K 248 >gi|302873343|ref|YP_003841976.1| extracellular solute-binding protein family 3 [Clostridium cellulovorans 743B] gi|307688487|ref|ZP_07630933.1| extracellular solute-binding protein family 3 [Clostridium cellulovorans 743B] gi|302576200|gb|ADL50212.1| extracellular solute-binding protein family 3 [Clostridium cellulovorans 743B] Length = 263 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 79/235 (33%), Gaps = 10/235 (4%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 FTS S ++KK G + + + NG++ GFD+D + + + Sbjct: 15 FTSLVGCGSKSSEVKKE-KFTVGFDAEFEPYGFMNENGEYVGFDLDLAQEVCKR---NNW 70 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 ++ P++ + + L+S ID + + + + Q F+ G Sbjct: 71 ELVKQPIDWDAKDMELESGSIDCIWNGFTINGREDK---YTWSSPYVNNSQVFVATTSSG 127 Query: 137 ISSVSQLSGASICVQAGTT--TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + + L+G + VQ ++ L + N + F D+ Sbjct: 128 VKKKNDLAGKIVAVQKDSSALAALNAEENAGLKNSFAKIVEFGDYNTAFMELEMGTVDSI 187 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 DI A + D IL +S + G+ + + V + M+ Sbjct: 188 AMDIGVAKAQMESRDNKK-FNILEQYLSTEKYGVGFLLGNEKLRDKVETSLQEML 241 >gi|260583445|ref|ZP_05851193.1| glutamine ABC transporter glutamine-binding protein/permease [Granulicatella elegans ATCC 700633] gi|260158071|gb|EEW93139.1| glutamine ABC transporter glutamine-binding protein/permease [Granulicatella elegans ATCC 700633] Length = 479 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 50/292 (17%), Positives = 98/292 (33%), Gaps = 19/292 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K F++S+L ++ ++ A +T F +G++ G D+ Sbjct: 9 KKSFWISLLGILFFLLSTPIEAA--------TKKYTIATDTTFAPFEFQDTSGNYVGIDM 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + +I+ L AL++ Q+D + T R+ F Sbjct: 61 DLMNAIAKE---ENFEIEIKALGFNAAVQALEAGQVDAVIAGMSMTDERK--QKFDFTDS 115 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + G G + IS+ +L G ++ V+ GT + + FE Sbjct: 116 YFDSGIGMAVSTSSNISTYEELRGKNVAVKIGTQGASFASSI--KDQYGFTISTFEDSAN 173 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI-IQGDTEWYNI 240 + + A D L +N P + ++ A+ +TE+ Sbjct: 174 MYQDVVSGNSVAAFEDYPVLGYAIRSNHLPMTLTSYKEQATQ--YGVAVLKNQNTEFIEA 231 Query: 241 VSWTHYAMVTAEELGITQKN-INQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291 + + + E N I TT+ + LG+ K++ GL Sbjct: 232 FNRGLATLKSNGEYDKIINNYIGTDDSTTTSTEDTSLLGLLKTNAPTLLNGL 283 >gi|260102147|ref|ZP_05752384.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus helveticus DSM 20075] gi|260084037|gb|EEW68157.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus helveticus DSM 20075] Length = 494 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 37/264 (14%), Positives = 87/264 (32%), Gaps = 29/264 (10%) Query: 1 MYK----DFFVSILCLIILFF-----TSFS----TNASILGDIKKRGFLKCGINTGLVGF 47 M K + F++ + +I F + + + S++ IK+ L G + Sbjct: 1 MKKAKIVNLFLAFITIISTLFLFNQPVAAADKKVASDSVMKKIKQSKELVVGTSADYPPL 60 Query: 48 AE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 V N + G D++ + ++ + +K+ ++ +AL++ ++D++ Sbjct: 61 EFTTSVNGNTKYVGVDIELAKDIAKDL---HAKLVIKNMSFDSLLVALETGKVDMVISAM 117 Query: 105 DWTLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 R+ + F I Y + + +G ++ Q G+ + Sbjct: 118 TPNPERKK--SVDFSQIYYKPSGEYFLINKRDQTKYKKIKDFAGQTVGAQTGSIQYQLIQ 175 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 K K ++ + A ++ + + ND V Sbjct: 176 SQMKKSKAKG----LGKINNLVLALKSGKMSGVVMEE-LTAKAYAKNDNSLMAVRSDLRE 230 Query: 222 SKSPLAPAIIQGDTEWYNIVSWTH 245 ++ A AI +G V+ T Sbjct: 231 EQAGNAVAIAKGQPGLVKAVNKTI 254 >gi|163751502|ref|ZP_02158725.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Shewanella benthica KT99] gi|161328623|gb|EDP99773.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Shewanella benthica KT99] Length = 241 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 71/218 (32%), Gaps = 17/218 (7%) Query: 31 KKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 K L G N F V ++KGFD+D R ++S ++ + Sbjct: 20 KSDDVLVLGTNASFPPFEYVGGASGNEFKGFDIDIARQIASDSGK---TLKIQNMKFDSL 76 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGAS 147 +AL + +ID ++ T R+ + F Y Q I K I S++ L G Sbjct: 77 IMALNAGRIDFIAAGMTITPERQA--SVNFSTPYYEATQVVITKKSDTSIHSITDLRGKH 134 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 VQ G+T + A F E + D S A + Sbjct: 135 FAVQLGSTAD------IMAKKYTDKVTAFNSGFEAIMELNNGKVD-LVLFDSQPAANFMR 187 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 P + I + A+ + + + ++ T Sbjct: 188 -KNP-DLKIQSLPFAAEFYGLAVAKKNPQLLQQINTTL 223 >gi|113971388|ref|YP_735181.1| extracellular solute-binding protein [Shewanella sp. MR-4] gi|113886072|gb|ABI40124.1| extracellular solute-binding protein, family 3 [Shewanella sp. MR-4] Length = 244 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 72/228 (31%), Gaps = 17/228 (7%) Query: 31 KKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 K L G N F V + KGFD++ + ++ ++ + Sbjct: 23 KSNDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIELAKQIAKDAGK---TLKVENMKFDSL 79 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147 +AL S +ID ++ T R+ + F Y Q +++K I ++ + Sbjct: 80 IVALNSGKIDFIASGMTITPERQA--SVNFSEPYYEATQVLLVNKDNDTIHTLDDIKDKH 137 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 VQ G+T + + + F E + + D D Sbjct: 138 FAVQLGSTAD------MMSKKYTQNVTAFNTGFEAIMELKNGKVDLVLFDSEPAANYLAK 191 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 N + ++ A+ + E N ++ T + + + Sbjct: 192 NP---DLKLIKLDFPPEFYGFAVSKQQPELLNSINNTLKNLKESGQYQ 236 >gi|254298886|ref|ZP_04966336.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei 406e] gi|157808906|gb|EDO86076.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei 406e] Length = 260 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 68/223 (30%), Gaps = 13/223 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 +L +K+ G LK + F +G +GFDVD + +++ + P Q++ Sbjct: 22 DLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDVDVAKEVAARLGVKP---QFVTTE 78 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQ 142 LQ+ + D++ T R L F + I + Sbjct: 79 WSGILAGLQAGKFDVIVNQVGITPAR--RQALDFSQPYVYSAAQLIQRADDKHDYGAPGA 136 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G I V GT AD K + E A R D D L Sbjct: 137 LQGKRIGVTLGT----NFADLAKTLQ-GVDVKTYPGAPEKLRDVAAGRIDVSMDDRLMLP 191 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L P ++ + +G+ ++ + Sbjct: 192 YLIKNAHMPLR-PGATINGGETQMGIPFRKGNPKFAKALDDAL 233 >gi|322385682|ref|ZP_08059326.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] gi|321270420|gb|EFX53336.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] Length = 724 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 67/210 (31%), Gaps = 16/210 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L L + +T+A +K +T F ++ +KG D Sbjct: 1 MKKKIIAFLLALFPILALGTTTHADT---------IKIVSDTAYAPFEFKDSDQTYKGID 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ I ++ + +A A+Q+ Q D + T RE Sbjct: 52 VDIINKVA-EIKGWAYEMSFPGFDAAVN--AVQAGQADAIIAGMTKTAEREKV--FTMSD 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K + S QL G ++ V+ GT + L + F+ + Sbjct: 107 TYYDTKVVIATTKANTVKSYDQLKGKTVGVKNGTAAQRFLEKIKDKYGF--TIKTFDTGD 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + A DA D + Sbjct: 165 LMYNSLTAGAVDAAMDDQPVIEYAISQGQD 194 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 32/237 (13%), Positives = 71/237 (29%), Gaps = 25/237 (10%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 ++ F + + G D+D +A++ ++ A+QS Q Sbjct: 275 TIASDSSFAPFVFQNDSNQYTGIDMDLIKAIAED---QGFTLEISNPGFDAAINAVQSGQ 331 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 D + T R+ + F Y + + ISS L G ++ V+ GT + Sbjct: 332 ADGMIAGMSVTEARKET--FNFSEPYYTANSILAVTESSTISSYEDLKGKTVGVKNGTAS 389 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 + L + + K F + + + A D + + Sbjct: 390 QTFLVENQSKYGYK--IKTFSDGSSMYDSLNSGSVAAIMDDEPVVKYAINQGKK------ 441 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 + I +P V++ A E + + + + + ++ Sbjct: 442 MKTPIEGTPSG------------EVAFAVKAGTNPELIEMFNNGLANLKANGKYQEI 486 >gi|221213818|ref|ZP_03586792.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Burkholderia multivorans CGD1] gi|221166607|gb|EED99079.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Burkholderia multivorans CGD1] Length = 302 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 78/223 (34%), Gaps = 13/223 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + L+ GI F G +GFDVD A+ + + K ++ A Sbjct: 66 ESTTLRFGIEAAYPPFESKTPAGQLQGFDVDIGNAVCAKL---NMKCVWVENAFDGLIPA 122 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICV 150 LQ+++ D+++ + T R + F P Y I + + + G + V Sbjct: 123 LQARKFDVINSAMNITAKR--KQSIDFTPPIYVVPIVMIAKRGSPLRPEVASVRGKRVGV 180 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 G++ E L ++ + + ++ ++I A A R DA + L Sbjct: 181 LQGSSQEDFLKAHWANAGVS--VVSYQDQDQIYADLVAGRLDAAVQEAQTAQEGFLDKPA 238 Query: 211 PSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248 ++ I+ + + + +GD V A+ Sbjct: 239 GRDYQIVGEPLKDPATLGEGTGFGLRKGDKALQAKVVGALDAL 281 >gi|300313886|ref|YP_003777978.1| amino acid ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gi|300076671|gb|ADJ66070.1| ABC-type amino acid transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 267 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 74/243 (30%), Gaps = 11/243 (4%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 ++L T+ + A L DIKK G ++ + F G DV+ R L+ + Sbjct: 17 LVLGLTAHAALADQLDDIKKAGKIRIATTSSTPLFGYSDEKLQLAGSDVEAARLLAQDLG 76 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 I + R LQ+ + DI+ + T R + F Sbjct: 77 VQLDLIP---VANAARVPTLQANRADIVVGSLSITPERLKV--IDFSTPYAVISLIIGAP 131 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K I + L+G I V T + K + +E + + + D Sbjct: 132 KSMVIKDYADLNGKRIGVTRATPNDTLTTQNAK----GAEIMRYEDDATLITSMVTGQVD 187 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 ++ S L ++ + + L AI + + + Sbjct: 188 VFSSTPSNLQEMQKKAPGKNLEMKFEQKAFD--LGIAINKNQPRLKEWIDGWVKTNMKNG 245 Query: 253 ELG 255 +L Sbjct: 246 KLN 248 >gi|168206718|ref|ZP_02632723.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens E str. JGS1987] gi|168211696|ref|ZP_02637321.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens B str. ATCC 3626] gi|170661862|gb|EDT14545.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens E str. JGS1987] gi|170710342|gb|EDT22524.1| amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens B str. ATCC 3626] Length = 278 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 95/291 (32%), Gaps = 32/291 (10%) Query: 1 MYKDFF-----VSILCLIILFFTSFST-------NASILGDIKKRGFLKCGINTGLVGFA 48 M K+ F V+++ + L + + IK+ G L G++ + Sbjct: 1 MKKNIFKKILSVAMIGGLTLSLAGCGAKTAKENGSNDKVAKIKESGKLVVGLSADYAPYE 60 Query: 49 E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 G D+D + ++ + D ++ + ++++ ID+ Sbjct: 61 FHIMKDGKDQIVGLDIDIAKEVAKNLGVD---LEIKEMEFGAIIQSVKNGMIDMGISG-- 115 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADY 163 T + + F I Y QG +++K I + L G + Q G+ Sbjct: 116 ITPDEKRKEAVDFSDIYYEAEQGILINKDNKESIKGIGDLKGKKVGAQMGSIQAEI---- 171 Query: 164 FKAHNMKYHPIVFERV-EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 A+ ++ + + + + DA ++ A + V I + Sbjct: 172 --ANGIEGADVKLLDNVNTLILELKTGKLDAVITELP--VAKIASEVNSELAVADEVIKN 227 Query: 223 KS-PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 A AI +G+ + + V+ T + ++ + ++ + Sbjct: 228 SEGGSAIAIQKGNKDLVDEVNSTIKELKENGKIDQFTNDAIELVPYQKKEE 278 >gi|313885015|ref|ZP_07818767.1| ABC transporter, permease protein [Eremococcus coleocola ACS-139-V-Col8] gi|312619706|gb|EFR31143.1| ABC transporter, permease protein [Eremococcus coleocola ACS-139-V-Col8] Length = 483 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 48/300 (16%), Positives = 102/300 (34%), Gaps = 16/300 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + + L+I F SFS +++ ++ F ++G G D+ Sbjct: 12 KKMLWPLMFILMISNFVSFSAV-----KAQEKESYSIITSSDYAPFEFTDSSGKLVGIDI 66 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + A++ + I+Y + AL+S Q D + T R+ F Sbjct: 67 EILEAIAEDQGFE---IEYELMPFSSGLQALESNQADGMIAAMGITDERKE--SFDFSDP 121 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + G F + K I + L G + + G+ + + + FE Sbjct: 122 YFEVGSMFAVSTKSRIKDLKSLEGKKVATKIGSQGAQIANELKDRYGY--QIMTFEDSVN 179 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + ++ DA D + T + ++ + + PL A+ +G + ++ Sbjct: 180 MYQDIKSGNSDAVIEDAPVMA--YATKTGTVDLTLIGEEMDTLPLGFAVNKGKNQ--ELI 235 Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301 + + + +E G+ + + + D F G + +GL K I+ Sbjct: 236 NKFNQGLANIKESGLYDDILAKYTGDNVEKVETSFFGQLTQNFPALMVGLGKTLMATILS 295 >gi|170690104|ref|ZP_02881271.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170144539|gb|EDT12700.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 266 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 90/254 (35%), Gaps = 15/254 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +S+ + + + + + + L+ GI F A G +GFD Sbjct: 1 MLRKLQLSLFVAAAVVAGAVGSVGTASAETQN--TLRFGIEAAYPPFESKTATGQLQGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + + K +++ ALQ+++ D+++ + T R+ + F Sbjct: 59 VDVGNAVCAKM---AVKCEWVENAFDGLIPALQARKFDVINSAMNITAKRK--QTIDFTR 113 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + + G+ V + G + V G++ E L ++ + + + Sbjct: 114 PIYIVPIVMVAKRGSGLMPDVKSMQGKRVGVLQGSSQEDFLKAHWANAGVS--VVSYADQ 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 +++ A R DA + + L ++ I +S + +GD Sbjct: 172 DQVYTDLVAGRLDAAVQETQTVEDGFLKKPAGHDYAIAGQPLSDPATLGEGTGFGLRKGD 231 Query: 235 TEWYNIVSWTHYAM 248 V A+ Sbjct: 232 KALAKKVDAALEAL 245 >gi|170721981|ref|YP_001749669.1| extracellular solute-binding protein [Pseudomonas putida W619] gi|169759984|gb|ACA73300.1| extracellular solute-binding protein family 3 [Pseudomonas putida W619] Length = 250 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 76/218 (34%), Gaps = 9/218 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ F V A+ GFD+D AL + + + + + AL + Sbjct: 23 TLRFATEGAYPPFNYVDADNQLHGFDIDITHALCEQMKVE---CTLVAQDWEGIIPALMA 79 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAG 153 ++ D + + T R +AF Y + K IS G ++ Q+ Sbjct: 80 RKYDAVVASMIDTEERRK--KIAFTDHYYRTPLTVAVAKDSKISDAQNTFEGYTVGAQSS 137 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T + D + ++ ++E +A A R D D L+ N + Sbjct: 138 STQAIYAEDVYAKAGAD--VKLYPTMDEANADLAAGRLDGVIADKFPLHEWMNKNGQDCC 195 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 V+ +K+ A A+ + D ++ A + A Sbjct: 196 KVLGDVAGTKANAAIAVRKDDDALRQRLNTAL-AQIVA 232 >gi|88603303|ref|YP_503481.1| extracellular solute-binding protein [Methanospirillum hungatei JF-1] gi|88188765|gb|ABD41762.1| amino acid ABC transporter substrate-binding protein, PAAT family [Methanospirillum hungatei JF-1] Length = 258 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 88/247 (35%), Gaps = 14/247 (5%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 L + +I G ++ GI+ F + ANG GFDVD + ++ + Sbjct: 14 AGFLITSCCGAAGNISGT--EKPVYIVGIDAYYPPFTYLDANGTPVGFDVDSVQWIADTM 71 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 K+Q P+ + AL++ +ID++ T R+ F + Q + Sbjct: 72 ---NFKVQITPVPWDDILTALETGEIDLIYSGFAITNERKEIC--DFTVPYWQVNQSVAV 126 Query: 132 HKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMK--YHPIVFERVEEIDAAYRA 188 + + + SG + Q T + + +E + E +A Sbjct: 127 NNQSSVKIDDFYSGLLRVGAQNNTRGVSWVELNLIGKGKMAPRSLVRYEGMNEAFDELQA 186 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R DA G S + K D H ++ +I + A+ G+++ ++ + Sbjct: 187 GRLDAIIGASSLI---KANLDSCDCH-VIGEIETDDHYGVAVKNGNSDLLETMNTGIDLL 242 Query: 249 VTAEELG 255 + + E Sbjct: 243 MLSPEWE 249 >gi|186683156|ref|YP_001866352.1| polar amino acid ABC transporter inner membrane subunit [Nostoc punctiforme PCC 73102] gi|186465608|gb|ACC81409.1| polar amino acid ABC transporter, inner membrane subunit [Nostoc punctiforme PCC 73102] Length = 501 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 68/239 (28%), Gaps = 21/239 (8%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 VS CL+++ S+ L+ F K G+ +GF +D Sbjct: 14 VVVSFGCLLLVSCAVNSSAGKT---------LRVATEPAFPPFEFKKPGGELEGFSIDLM 64 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 A++ A K+ + + AL +K +D + T R + ++F + Sbjct: 65 NAIAVAA---KFKVDFQSMPFDGMIPALAAKTVDAAISSITITEERAKT--ISFSRPYFK 119 Query: 125 DGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G + + L I VQ GTT F+ Sbjct: 120 AGLAIAIRADDQNITGFDSLKNKKIAVQIGTTGAAKAKSI-----PGVQLRSFDSAPVAL 174 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 DA D + I+ ++++ A + I + Sbjct: 175 QELANGNVDAVINDAPVTL-YAINTGNIQGIKIVQQLLTEEFYGIATAKNSPNLVLINN 232 >gi|270261141|ref|ZP_06189414.1| hypothetical protein SOD_a03660 [Serratia odorifera 4Rx13] gi|270044625|gb|EFA17716.1| hypothetical protein SOD_a03660 [Serratia odorifera 4Rx13] Length = 244 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 77/226 (34%), Gaps = 25/226 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L + F + + + ++ + F + A+ GFD Sbjct: 1 MKK-LLLAATVLAGIAFNAGAAD-----------TIRFAASATYPPFESLDASNKIVGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + ++ + AL+ K+ D + D T R + F Sbjct: 49 IDLANALCKQM---KAECTFTNQAFDSLIAALKFKKYDAVISGMDITPERSKQVA--FTQ 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K SS++ L G + ++ GTT + + D + + ++ + Sbjct: 104 PYYANSAIVIAEKG-KFSSLADLKGKKVGMENGTTHQKYMQDKHPE----INTVSYDSYQ 158 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + R D GD + + + + + ++ + Sbjct: 159 NAILELKNGRIDGVFGDTAVVNEW---LKNNPQLAPVGEHVTDAQY 201 >gi|160941547|ref|ZP_02088879.1| hypothetical protein CLOBOL_06445 [Clostridium bolteae ATCC BAA-613] gi|158435512|gb|EDP13279.1| hypothetical protein CLOBOL_06445 [Clostridium bolteae ATCC BAA-613] Length = 307 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 29/230 (12%), Positives = 64/230 (27%), Gaps = 13/230 (5%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 + S + I + G LK G F N + G+DV+ RA+ + Sbjct: 58 TAAASAEKTRYEKILESGVLKVGTEGTYKPFTYHDDNNELCGYDVEVARAIGEKMGVKTE 117 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 + + + +L + +D++ T R+ F + I Sbjct: 118 ---FSEITWEGLLTSLDTGTVDLVLNQVGVTDERKE--KYDFSDPYLYSYIALITKTDNN 172 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + + ++ +A+ + + A R D Sbjct: 173 DITDWDSANGKKTSLNVSSNYALIAE-----KYNMDITASDTFSKDIELLLAGRTDCVIN 227 Query: 197 DISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + A P + + + +A I +G+ + V+ Sbjct: 228 NTIAFNDFLTQKPDTPIKIAAVQEQADT--VAVPIPKGNDDLVEAVNKAI 275 >gi|53720225|ref|YP_109211.1| ABC transporter substrate binding component [Burkholderia pseudomallei K96243] gi|76809070|ref|YP_334464.1| ABC transporter substrate binding component [Burkholderia pseudomallei 1710b] gi|167720785|ref|ZP_02404021.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei DM98] gi|167739769|ref|ZP_02412543.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei 14] gi|167816989|ref|ZP_02448669.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei 91] gi|167846891|ref|ZP_02472399.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei B7210] gi|167895468|ref|ZP_02482870.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei 7894] gi|167903852|ref|ZP_02491057.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei NCTC 13177] gi|167912119|ref|ZP_02499210.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei 112] gi|167920092|ref|ZP_02507183.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei BCC215] gi|254180993|ref|ZP_04887591.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1655] gi|254196093|ref|ZP_04902518.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei S13] gi|52210639|emb|CAH36623.1| ABC transporter, substrate binding component [Burkholderia pseudomallei K96243] gi|76578523|gb|ABA47998.1| ABC transporter, substrate binding component [Burkholderia pseudomallei 1710b] gi|169652837|gb|EDS85530.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei S13] gi|184211532|gb|EDU08575.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia pseudomallei 1655] Length = 266 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 68/223 (30%), Gaps = 13/223 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 +L +K+ G LK + F +G +GFDVD + +++ + P Q++ Sbjct: 28 DLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDVDVAKEVAARLGVKP---QFVTTE 84 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQ 142 LQ+ + D++ T R L F + I + Sbjct: 85 WSGILAGLQAGKFDVIVNQVGITPAR--RQALDFSQPYVYSAAQLIQRADDKHDYGAPGA 142 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G I V GT AD K + E A R D D L Sbjct: 143 LQGKRIGVTLGT----NFADLAKTLQ-GVDVKTYPGAPEKLRDVAAGRIDVSMDDRLMLP 197 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L P ++ + +G+ ++ + Sbjct: 198 YLIKNAHMPLR-PGATINGGETQMGIPFRKGNPKFAKALDDAL 239 >gi|254473366|ref|ZP_05086763.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp. JE062] gi|211957482|gb|EEA92685.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp. JE062] Length = 258 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 81/249 (32%), Gaps = 20/249 (8%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 F + ++ FT+ S + +I K L+ F ++G GFDV+ Sbjct: 3 FARMALATLMSFTAASALQA--DEITK---LRVATEGAYPPFNFTGSDGVLTGFDVEIGN 57 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL + + + ++ L + + D + + T R ++F Y Sbjct: 58 ALCAEMKVE---CEWGTQEWDGMIPGLVAGKYDAIIASMSITEER--LERISFSRSYYNT 112 Query: 126 GQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 + K ++ S L G I Q GTT + + + ++ EE Sbjct: 113 PSTIAVPKDSPVTEISPEALDGLLIGAQGGTTHSVVAEEVYA----DADVALYPTSEEYK 168 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS----PLAPAIIQGDTEWYN 239 R DA D+ L + + +I I + + +G E + Sbjct: 169 LDIENGRLDAVIDDLGVLQSWVDSEAGSCCKIIGSLPIQPELHGQGIGVGVRKGQEELAD 228 Query: 240 IVSWTHYAM 248 S A+ Sbjct: 229 RFSQAILAI 237 >gi|92115413|ref|YP_575341.1| extracellular solute-binding protein [Chromohalobacter salexigens DSM 3043] gi|91798503|gb|ABE60642.1| amino acid ABC transporter substrate-binding protein, PAAT family [Chromohalobacter salexigens DSM 3043] Length = 254 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 31/230 (13%), Positives = 68/230 (29%), Gaps = 20/230 (8%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFC 64 ++ + + T+ + L + V F + +G+ GFD+D Sbjct: 8 LSALALAMGIGGTALAQETPTLA---------VATDPSFVPFEMMDEESGEMVGFDIDII 58 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ + + ++ A+Q+ +DI T R S + F Y Sbjct: 59 NTIADRAGFE---VDLNTMDFNGIIPAVQTGNVDIAIAGITITDER--SEIVDFSDPYYD 113 Query: 125 DGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G ++ + + L G I + G+T+ L + + ++ Sbjct: 114 SGLRILVPSSNDDVEEIDDLEGMRIGTKIGSTSYDYLQE---ELGEDAEITPYPGSADMY 170 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 A DA D ++ + A ++G Sbjct: 171 MALMGGSVDAVFYDAP-NVGYFAQTKGEGRTKVVGPLYEGQQYGIAFVKG 219 >gi|283832469|ref|ZP_06352210.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Citrobacter youngae ATCC 29220] gi|291072128|gb|EFE10237.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Citrobacter youngae ATCC 29220] Length = 243 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 70/218 (32%), Gaps = 16/218 (7%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G++ F + A+ GFD+D AL + ++ + AL+ Sbjct: 22 KISFGVSATYPPFESLDASNKIVGFDIDLATALCKQM---QAECTFTNHAFDSLIPALKF 78 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K+ D + D T R + F + ++ KK + + L G I ++ GT Sbjct: 79 KKYDAVISGMDITPERSKQVA--FTQPY-YANSALVIAKKDTYKTFADLKGKRIGMENGT 135 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T + L D + ++ + + R D GD + + P Sbjct: 136 THQKYLQDKHPE----VKTVAYDSYQNAIIDLKNGRIDGVFGDTAVVNEWL--KTNPQLG 189 Query: 215 VILPDIISKSP----LAPAIIQGDTEWYNIVSWTHYAM 248 + L A+ + ++ A+ Sbjct: 190 AATDKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAI 227 >gi|254252780|ref|ZP_04946098.1| extracellular solute-binding protein [Burkholderia dolosa AUO158] gi|124895389|gb|EAY69269.1| extracellular solute-binding protein [Burkholderia dolosa AUO158] Length = 321 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 74/219 (33%), Gaps = 13/219 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F +G GFD+D A+ + + +K ++ + ALQ Sbjct: 87 KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KTKCVWVENDFDGLIPALQ 143 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152 +++ D ++ + T R+ +AF Y I + G + + L G + V Sbjct: 144 ARKFDAINSDMTITEQRK--HAIAFTDPIYTIPNQLIAKQGSGLLPTAQSLKGKRVGVLQ 201 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT E + + ++ + A ++ R DA D A L+ + Sbjct: 202 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGAKGFLSKPQGQ 259 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246 +S + + + + D + Sbjct: 260 GFAFAGGTVSDAEILGSGVGFGLRKNDAALKTALDQALK 298 >gi|226355644|ref|YP_002785384.1| ABC transporter periplasmic protein [Deinococcus deserti VCD115] gi|226317634|gb|ACO45630.1| putative ABC transporter, periplasmic component [Deinococcus deserti VCD115] Length = 251 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 79/226 (34%), Gaps = 14/226 (6%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 S A +IK+ G +K F +K GF+VD + L++ + K+Q Sbjct: 16 GSAEARTWEEIKRSGTIKIATEGAFPPFNMIKGK-QLTGFEVDLAKELATQLG---LKVQ 71 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 ++ + L + D + + T R + F Y G + G + Sbjct: 72 WVTQPFDNLLIGLNQDRYDFVIASHGITPERAK--AVNFANPHYCTGGAIVTR-PGGPMT 128 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G + VQ GTT + F + + AA A R DA+ GD Sbjct: 129 AAALKGKKVAVQVGTTYLENVRKVPG----VGDVKTFPKDTDAQAALMAGRVDAWVGDKF 184 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L D++ K +A A+ +G++ ++ Sbjct: 185 TGIDLVKAQKGKVIQ---GDMLFKESIAMAVKKGNSGLLKELNAAL 227 >gi|161869733|ref|YP_001598900.1| amino acid permease substrate-binding protein [Neisseria meningitidis 053442] gi|161595286|gb|ABX72946.1| amino acid permease substrate-binding protein [Neisseria meningitidis 053442] Length = 275 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 64/225 (28%), Gaps = 25/225 (11%) Query: 1 MYKDFFVSILCLIILFFTSFST---------------NASILGDIKKRGFLKCGINTGLV 45 M K F + + ++L S++ I +G + G Sbjct: 1 MLKKFVLGGIAALVLAACGGEGGSASSSAPAQSAGASGDSLIERINNKGTVTVGTEGTYA 60 Query: 46 GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 61 PFTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVG 117 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 T E + G + I S+ + G + K Sbjct: 118 LT-SPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTAQSLTSNYGE------K 170 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 A + + + + R DA D A+ N Sbjct: 171 AKAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215 >gi|242279377|ref|YP_002991506.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] gi|242122271|gb|ACS79967.1| extracellular solute-binding protein family 3 [Desulfovibrio salexigens DSM 2638] Length = 291 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 88/271 (32%), Gaps = 35/271 (12%) Query: 1 MY--KDFFVSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGFA 48 M ++ VS+ I+ +F G I +R L GI+ + Sbjct: 1 MKLWRNLSVSVAVAILAISLAFPALADDIGRDYSKGDTFGKILQRKSLNVGISI-FEPWV 59 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 NG++ GF++D + L+S + ++ ++ + L + + DI+ + T Sbjct: 60 MKDQNGEYIGFEIDVAKRLASDMG---VQVNFVETDWDTIIPDLIANKFDIIICGMNMTP 116 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE----------- 157 R L + F F+ + +K +++ + V + Sbjct: 117 ER--ILKVNFSDPYEFNSMSIVANKDVKTGKMTRADYNNANVGLPHLSALEDFNSPKIRI 174 Query: 158 -----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 T D K + K +VFE A L + Sbjct: 175 GVRRGTTAEDAVKNYTPKAKAVVFENEATSIQALLNGEVSCLMLSQPLPKMLAEKYPKKL 234 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 ++ LP ++ P + +GD ++ ++ Sbjct: 235 -YLALPSGFAREPSGFVVRKGDHDFLTYLNN 264 >gi|159029917|emb|CAO90296.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 503 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 35/255 (13%), Positives = 79/255 (30%), Gaps = 19/255 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + F + ++ + T + + + F + G GFD+D Sbjct: 12 RVIFALLGLVLAIGLTVIPAFSQTPPN-----PFRVATEATFPPFEFQQG-GQLTGFDID 65 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 RA+ I + L ALQ++ ++ T R + ++F Sbjct: 66 LMRAIGKEA---DLNIDFRNLPFDGIIPALQARTVEAAISGMTITAER--AQAISFSRPY 120 Query: 123 YFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + G + + I + L G I VQ GTT L A F+ Sbjct: 121 FRAGLAIAVREDNQTIRNFEDLKGKRIAVQIGTTGALEATKIPGA-----VVSQFDSAAL 175 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 R +A D + ++ +++++ A+ + + ++ Sbjct: 176 ALQELINGRVEAVVNDKPVTL-YAIKQAGLRRVKVVGELLTEEFYGIALPKNSP-YLQLI 233 Query: 242 SWTHYAMVTAEELGI 256 + ++ + + + Sbjct: 234 NDALGRVIESGQYDV 248 >gi|15599060|ref|NP_252554.1| amino acid binding protein [Pseudomonas aeruginosa PAO1] gi|9950043|gb|AAG07252.1|AE004803_8 probable amino acid binding protein [Pseudomonas aeruginosa PAO1] Length = 263 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 78/226 (34%), Gaps = 13/226 (5%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 + G L+ GI F+ A G+ GFD D AL + + K Q++ Sbjct: 24 AVAADGNLRIGIEAAYPPFSFKTAEGELAGFDYDIGNALCAQM---QVKCQWIEQEYDGL 80 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147 +L+ ++ID + T R + F YF +M + + S SQL+G Sbjct: 81 IPSLKVRKIDAALSSITITEERRR--SVDFTHKYYFTPGRLVMKEGAQLDDSFSQLAGKR 138 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 I VQ G T + + + + +EI A R DA D L L Sbjct: 139 IGVQRGATADRFASAVLAKAG--AEVVRYTSQDEIYLDLVAGRLDATFADSIPLQTGFLD 196 Query: 208 NDRPSEHVIL-----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R + A+ +GD E ++ A+ Sbjct: 197 TPRGKGYAFAGPEFKDPKYFGEGAGIAVRKGDAELVGKLNAAIDAI 242 >gi|322832889|ref|YP_004212916.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] gi|321168090|gb|ADW73789.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602] Length = 273 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 76/256 (29%), Gaps = 16/256 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K I ++L +A+ L K++ +K + G+ G Sbjct: 1 MKKTLLSLITAGVLLNGAVSVASAAEL---KQKDEIKVAMMPNYPPLEFKDPATGNLTGM 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D D L + KI + + ++ A+ + ++D++ T R F Sbjct: 58 DYDLGMELGKRL---NRKISWQEIGFEQMVNAVATHRVDMILSGMTDTKPR--QDIATFV 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-----NMKYHPI 174 Q + K I+++ L G + TT +A + +A+ I Sbjct: 113 DYYNSGPQFYTTVAHKEINTMLDLCGKKVGTSRRTTFPAEIAAWSEANCVPAGKPAIVVI 172 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E + R R + L + + L + I + D Sbjct: 173 GAEGTADARTQLRQGRIEGVVQGSETLPYIMNLEKD--TYKPLGKAFAYQVTGMGISKDD 230 Query: 235 TEWYNIVSWTHYAMVT 250 + V M+ Sbjct: 231 QPLIDAVKGALTDMIA 246 >gi|146312501|ref|YP_001177575.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter sp. 638] gi|145319377|gb|ABP61524.1| L-arginine-binding protein / L-lysine-binding protein / L-ornithine-binding protein [Enterobacter sp. 638] Length = 260 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 94/279 (33%), Gaps = 28/279 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ ++ +++ + L ++ G + F+ A GD+ GFD Sbjct: 1 MKKTVLALSL---LVGLSAAASSYAALPQ-----TVRIGTDATYAPFSSKDAKGDFVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + K ++ + +L++K+ID + + T R +AF Sbjct: 53 IDLGNEMCKRM---QVKCTWVGSDFDALIPSLKAKKIDAIISSLSITEKR--QQEIAFSE 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y I K I ++ L G + V G+T E ++ + + ++ Sbjct: 108 KLYAADSRLIAAKGSPIQPTIESLKGKHVGVLQGSTQEGYANADWREKGVD--VVAYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I + A R DA D A L E + + + D Sbjct: 166 DLIYSDLAAGRLDAAFQDEVAASEGFLKQPAGKEFAFAGPSVKDKKYFGDGTGIGLRKDD 225 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 E EL ++++K + +V Sbjct: 226 AELKAAFDKAFN------ELRKDGT-YDKLAKKYFDFNV 257 >gi|296103995|ref|YP_003614141.1| histidine/lysine/arginine/ornithine transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058454|gb|ADF63192.1| histidine/lysine/arginine/ornithine transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 260 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 90/245 (36%), Gaps = 20/245 (8%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ G + F + G+ GFD+D L I ++ Y+ +L++ Sbjct: 27 KIRIGTDPTYAPFESKNSKGELVGFDIDLANELCKRI---KAQCTYVENPLDALIPSLKA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153 K+ID++ + T R +AF Y ++ K I ++ L G + V G Sbjct: 84 KKIDVIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKSSDIQPTLESLKGKRVGVLQG 141 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT E +++ + + ++ E I A A R DA D A L + Sbjct: 142 TTQETYGNEHWAPKGI--EIVSYQGQENIYADLTAGRIDAAFQDEVAASEGFLKTPVGKD 199 Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + I L + + D E ++ +A + A+ ++++K Sbjct: 200 YKFGGPSIKDVKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYDKLAKKY 252 Query: 269 TNPDV 273 + +V Sbjct: 253 FDFNV 257 >gi|238897602|ref|YP_002923281.1| high-affinity glutamine transport protein (ABC superfamily, peri_bind) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465359|gb|ACQ67133.1| high-affinity glutamine transport protein (ABC superfamily, peri_bind) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 247 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 82/247 (33%), Gaps = 22/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + ++ LF + S+ L I+T V F + + + GFD Sbjct: 1 MKSLIKIILITFAFLFTLNVSSAEKS---------LIVAIDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + + P++ ALQ+K +D+ T R+ + F Sbjct: 51 IDIWDAIAKELKLNY---TLKPMDFSGIVPALQTKNVDLALAGITITEQRKK--AIDFSD 105 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I + L + V++GT + DY KA+ F + Sbjct: 106 GYYKSGLLVMVKSNNDKIKNAEDLKDKIVAVKSGTGSV----DYAKANIKTKDLRQFPNI 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + T + +++ A +G + Sbjct: 162 DNAYLELGTGRADAVLHDAPNILFFIKTAGDKK-FKAVGEMLESLQYGIAFPKG-SVLRE 219 Query: 240 IVSWTHY 246 V+ Sbjct: 220 EVNLALN 226 >gi|229916003|ref|YP_002884649.1| extracellular solute-binding protein family 3 [Exiguobacterium sp. AT1b] gi|229467432|gb|ACQ69204.1| extracellular solute-binding protein family 3 [Exiguobacterium sp. AT1b] Length = 282 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 36/260 (13%), Positives = 79/260 (30%), Gaps = 19/260 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-------LGDIKKRGFLKCGINTGLVGFAEV-KA 52 M + L + + + S +I++ G L G L + + Sbjct: 1 MKRTTKGLAATLFLAIPLAACGDDSTDQADTTRWEEIQEEGTLTVGTAGTLYPASFREEE 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDV+ + ++ + +I++ + ++Q+ QID+ + + T + Sbjct: 61 SDTLTGFDVELMKEIAKRL---DLEIEFKEMAFDNMLTSVQNGQIDVAANDISVTE--DR 115 Query: 113 SLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 AF + I+ K GI S+ L G +A T D + + + Sbjct: 116 KEKFAFSKPYKYTYGTAIVRKSDLSGIESLEDLKGKKAAGEATTVFM----DVAREYGAE 171 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 ++ R D D + + +A + Sbjct: 172 EVIYDNATNDQYLRDVSTGRTDVILNDYYLQTLALAFFPEFDITIHPDIAYNPQEVAFLM 231 Query: 231 IQGDTEWYNIVSWTHYAMVT 250 + + E + M+ Sbjct: 232 DKENDELQENIDRVLDEMLE 251 >gi|170703023|ref|ZP_02893852.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170132064|gb|EDT00563.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 264 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 69/221 (31%), Gaps = 13/221 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F +G GFD+D A+ + + K ++ + ALQ Sbjct: 30 KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KVKCVWVENDFDGLIPALQ 86 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152 +++ D ++ + T R+ +AF Y I + G+ + L G + V Sbjct: 87 ARKFDAINSDMTITDQRK--HAIAFTDPIYTIPNQLIAKQGSGLQPTPQALKGKRVGVLQ 144 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA-YTGDISALYALKLTNDRP 211 GT E + + ++ + A ++ R DA + + Sbjct: 145 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGSKGFLSKPQGQ 202 Query: 212 SEHVILPDIISKSPL----APAIIQGDTEWYNIVSWTHYAM 248 + L + + D + + Sbjct: 203 GFGFAGGTVADAEILGSGVGFGLRKNDAALKTALDQALKGL 243 >gi|167034986|ref|YP_001670217.1| cationic amino acid ABC transporter periplasmic binding protein [Pseudomonas putida GB-1] gi|166861474|gb|ABY99881.1| cationic amino acid ABC transporter, periplasmic binding protein [Pseudomonas putida GB-1] Length = 261 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 82/254 (32%), Gaps = 23/254 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L + S + LK GI FA + +G GFD Sbjct: 1 MKKLALLGALALSVFSLVSQADEKP----------LKIGIEAAYPPFAFKQPDGSIAGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + +K ++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCEEM---KAKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTK 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M +S L G I VQ G+ + + A + + Sbjct: 106 RYYLTPARLVMKDGTTVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKG--ATVVPYGTQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 EI A R D D + L L D + + + A+ +GD Sbjct: 164 NEIYLDVAAGRLDGTVADATLLEDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGD 223 Query: 235 TEWYNIVSWTHYAM 248 + ++ A+ Sbjct: 224 KANVDRINAAIDAI 237 >gi|324990732|gb|EGC22668.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK353] Length = 287 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 9/246 (3%) Query: 2 YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K + S+ + +L + +S ++ ++ G F+ +G G+D Sbjct: 16 KKTLKYFSLTAVSVLAIGALVACSSSSEKKTEKIKVEVGTVGTTKPFSYEDKDGKLTGYD 75 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ RA+ D ++ + F L S + I + N E + + Sbjct: 76 IEVLRAIFKD--SDKYEVNFNKTKWASIFSGLDSDRYQIGANNIS--YSEERANKYLYAS 131 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-- 178 + ++ K +GI S+ + G S V GT+T L DY K H+ I + Sbjct: 132 PYAKNPTVLVVRKGEGIKSLDDIGGKSTEVVQGTSTAQQLEDYNKEHSDNPTKINYTDGT 191 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237 +++I A R D + + + ++ + P I G + Sbjct: 192 IQQILANLNDGRTDYKVFER-ITVESIIKDQGLKNLEVIELPSDQQPYVYPIIASGQEDL 250 Query: 238 YNIVSW 243 V+ Sbjct: 251 QKFVNK 256 >gi|28900675|ref|NP_800330.1| amino acid ABC transporter periplasmic amino acid-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|260365549|ref|ZP_05778086.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus K5030] gi|260877613|ref|ZP_05889968.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus AN-5034] gi|260895966|ref|ZP_05904462.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus Peru-466] gi|260901647|ref|ZP_05910042.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus AQ4037] gi|28809055|dbj|BAC62163.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|308085208|gb|EFO34903.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus Peru-466] gi|308090946|gb|EFO40641.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus AN-5034] gi|308108882|gb|EFO46422.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus AQ4037] gi|308114387|gb|EFO51927.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus K5030] Length = 273 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 84/252 (33%), Gaps = 20/252 (7%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K ++L L I T A+ + IK+RG L+ G++T V +A G+ Sbjct: 1 MKLFKATITALLGLAIAMPTLAKEEAATTPNIDQIKERGTLRVGMST-FVPWAMRNKQGE 59 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GF++D + L+ K++++P AL +K+ D++ T R S Sbjct: 60 LIGFEIDVAKRLAEDSG---LKVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKS 114 Query: 116 LAFRPITYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + F G +K+ S I + G T + F Sbjct: 115 VLFTEPYSHSGVQVAANKELASGFSEFSDFDSRRVKIAARRGAFTVQVARETFPKAK--- 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + F+ + A + + + + +SK A A+ Sbjct: 172 -ILQFDDDAQAFQEVLNGNAHAVIASSPKPEHETVKHSDKL-FLPFSERLSKGNEAFAVR 229 Query: 232 QGDTEWYNIVSW 243 G+ + + Sbjct: 230 LGEEDKKAFFNK 241 >gi|325955845|ref|YP_004286455.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus acidophilus 30SC] gi|325332410|gb|ADZ06318.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus acidophilus 30SC] gi|327182680|gb|AEA31127.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus amylovorus GRL 1118] Length = 494 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 86/265 (32%), Gaps = 29/265 (10%) Query: 1 MYK----DFFVSILCLIILFFT----SFST-----NASILGDIKKRGFLKCGINTGLVGF 47 M K F++ + LI F +F+ N +++ IK+ L G + Sbjct: 1 MKKAKIIHLFLAFITLISTLFLFNQPTFAATKKVENGTVMKKIKQSKELVVGTSADYPPL 60 Query: 48 AE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 V N + G D++ + ++ + +K+ ++ +AL++ ++D++ Sbjct: 61 EFTTSVNGNTKYVGVDIELAKDIAKDL---HAKLVIKNMSFDSLLVALETGKVDMVISAM 117 Query: 105 DWTLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 R+ + F I Y + + + ++ Q G+ + Sbjct: 118 TPNPERKK--SVDFSKIYYKPSGEYFLINKRDQSKYRKIKDFADQTVGAQTGSIQYQLIQ 175 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 K ++ + A ++ + + ND V Sbjct: 176 SQMKK----SKVKGLGKINNLVLALKSGKMSGVVMEE-LTAKAYAQNDNSLMAVRSDLRE 230 Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHY 246 ++ A A+ +G + V+ T Sbjct: 231 QQAGNAVAVAKGQGDLVKAVNKTIN 255 >gi|227510040|ref|ZP_03940089.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227512970|ref|ZP_03943019.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227083727|gb|EEI19039.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227190419|gb|EEI70486.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 716 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 89/266 (33%), Gaps = 19/266 (7%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G + F + G D+D RA+++ K++ PL A++ Sbjct: 264 KTFTIGTDVTFPPFEFANKQNKYVGIDMDLVRAIANE---QGFKVKIKPLGFNAAVQAVE 320 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 S QID + T R+ F + G ++KK + S+SQL G + V+ G Sbjct: 321 SGQIDGVIAGMSITNARKA--QFNFSNPYFTSGVVMAVNKKSKVKSLSQLRGKKVAVKTG 378 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 T K + F+ + A D + + + ++ Sbjct: 379 TAGADYANSIKKKYGF--TVTTFDDSNNMYQDVTTGNSAACFEDHPVM---QYAIKQGTK 433 Query: 214 HVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG------ITQKNINQVSK 266 I+ +P A+ + + + + + + + +K Sbjct: 434 LKIVTKPAESAPYGFAVKKGHNKALLAAFNNGLKDLKASGTYDDIKAKYLGSSDALTTTK 493 Query: 267 DTTNPDVQRFLGIDKSSNIGEAL-GL 291 T + + + FLG+ K N G L GL Sbjct: 494 STGSSEDRTFLGLIK-QNQGALLSGL 518 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 36/234 (15%), Positives = 73/234 (31%), Gaps = 19/234 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + + L L F++ + A G + F + G D+D Sbjct: 12 RWVVFLMTFLTCLIFSNIAAQAKTYQ---------IGTDVTYPPFEFANKQNKYVGIDID 62 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + K+ P+ ++QS Q D + T R+ F Sbjct: 63 IMNAIAKE---EGFKVHIKPVGFNAAVQSVQSGQEDGVIAGMTITPDRQA--KFDFGTPY 117 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y G + K I++ QL G + ++ GT K + K + F+ + + Sbjct: 118 YKTGVVMAVAKSSHITNFKQLKGKRVALKTGTAAADYANSIKKKYGFKT--VTFDDSDNM 175 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 A D + + + + I+ + A+ +G + Sbjct: 176 YQDVTTGNSVACFEDQPVM---QYGIKQGLKLKIVTKPANTGWYGFAVKKGTHK 226 >gi|54023857|ref|YP_118099.1| putative transporter substrate-binding protein [Nocardia farcinica IFM 10152] gi|54015365|dbj|BAD56735.1| putative transporter substrate-binding protein [Nocardia farcinica IFM 10152] Length = 305 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 42/243 (17%), Positives = 76/243 (31%), Gaps = 16/243 (6%) Query: 24 ASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L IK+ G L G+N A+G GFDVD A+++ + Y+ Sbjct: 55 ADRLPDKIKQSGKLVVGVNVPYQPNEYRDADGKIVGFDVDLMDAVTAVLGIQAE---YVE 111 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 ++ A+Q+ D+ T +E + F + G + K I + Sbjct: 112 SAFEKIIPAIQAGTYDVGMS--SITDSKEREQQVDFT-TYFNAGIQWAQQTGKPI-DPAN 167 Query: 143 LSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 G + VQA T A+ F+ A + DA + D Sbjct: 168 ACGKRVAVQATTVEHTEEVPAKSAECVAQGKPPIDIKAFDEQSAATNALVQGQVDAMSAD 227 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + E + +P A+ +G ++ ++ + Sbjct: 228 SPVTAYAIKQSGGKIE--PAGPVFDSAPYGWAVQKGSP-LAAVLQAAVNHLIRNGQYKQI 284 Query: 258 QKN 260 +N Sbjct: 285 TEN 287 >gi|222823602|ref|YP_002575176.1| amino acid ABC transporter, permease/substrate-binding lipoprotein [Campylobacter lari RM2100] gi|222538824|gb|ACM63925.1| amino acid ABC transporter, permease/substrate-binding lipoprotein [Campylobacter lari RM2100] Length = 252 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 76/220 (34%), Gaps = 13/220 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +V + +L + S++ + K GI F V + GFD Sbjct: 1 MKKILYVVLALFGMLVLGACSSDKNQ-ASASSEKVYKVGIAANYPPFDFV-KDAKITGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + K++++ ++ AL++ +ID+++ T R + F Sbjct: 59 VDLLEEIAKR---ENLKLEWVNMSFDGLIPALKAGKIDMIASAMSSTPQR--LTSMDFSD 113 Query: 121 ITYFDGQGFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + ++ IS L G I VQ GT + + + E + Sbjct: 114 TYFNTKNLYLKLKTDSSISDKKSLEGKKIGVQLGT-----IQESAAKTIPNTQVVASEEM 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 A +A + DA D TN+ + D Sbjct: 169 LAAILALKAGKVDAVLTDKDIGKGYLKTNEELEAFLEEND 208 >gi|209521740|ref|ZP_03270426.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. H160] gi|209497833|gb|EDZ98002.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. H160] Length = 260 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 80/225 (35%), Gaps = 13/225 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K ++ G++ F A+G GFD+D + + +K ++ + Sbjct: 23 KDWSTIRFGVDASYPPFESKGADGKLVGFDIDLGNEICKRVG---AKCVWVENDFDGMIP 79 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149 AL++K+ D + + T R + F + + + GI + L G ++ Sbjct: 80 ALKAKKFDGVLSSMSMTPQRAEQIA--FSSKLFNTPTRLVAKQGSGILPTAESLKGKTVG 137 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ GT E Y++ + ++ +++ A + R DA D L Sbjct: 138 VEQGTIQETYAKTYWEPAG--AKVVPYQNQDQVYADLISGRLDAALQDAVQADQGFLKTP 195 Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMV 249 R V + ++ + + + DT+ V M+ Sbjct: 196 RGKGFVFVGQDLNDPKILGSGAGIGMRKEDTDLKAKVDKAIADMI 240 >gi|313472476|ref|ZP_07812968.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Lactobacillus jensenii 1153] gi|313449162|gb|EEQ68903.2| amino acid ABC transporter, periplasmic amino acid-binding protein [Lactobacillus jensenii 1153] Length = 251 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 82/244 (33%), Gaps = 15/244 (6%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + I + + S S ++ +G L G+ +A NG GF+VD +A++ Sbjct: 1 MIAISVGLVACSNQKSSSSEVLHKGTLTVGLEGTYAPYAYR-ENGKLTGFEVDLAKAVAK 59 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 I+++P L +K+ DI+ + T R+ AF + Sbjct: 60 KAGYK---IKFVPTKWDSLIAGLGAKKFDIVINDIAMTPERKK--AYAFSTPYIYSKSAL 114 Query: 130 IMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 IM K I S + G I GT + + + + R Sbjct: 115 IMKKTNNTIKSAKDIKGLKIAAATGTANADNVKKFGGQN------VSSTDFSTAMELIRQ 168 Query: 189 HRCDAYTGDISAL-YALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIVSWTHY 246 +R A A Y K + +++ +P + + + +G++ ++ Sbjct: 169 NRVVAAMNSKEAFLYYQKSQHVTDLKYMEVPSSQIAAQEIGIMMAKGNSSLQKKINKALN 228 Query: 247 AMVT 250 + Sbjct: 229 TLKE 232 >gi|49082954|gb|AAT50877.1| PA3865 [synthetic construct] Length = 264 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 78/226 (34%), Gaps = 13/226 (5%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 + G L+ GI F+ A G+ GFD D AL + + K Q++ Sbjct: 24 AVAADGNLRIGIEAAYPPFSFKTAEGELAGFDYDIGNALCAQM---QVKCQWIEQEYDGL 80 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147 +L+ ++ID + T R + F YF +M + + S SQL+G Sbjct: 81 IPSLKVRKIDAALSSITITEERRR--SVDFTHKYYFTPGRLVMKEGAQLDDSFSQLAGKR 138 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 I VQ G T + + + + +EI A R DA D L L Sbjct: 139 IGVQRGATADRFASAVLAKAG--AEVVRYTSQDEIYLDLVAGRLDATFADSIPLQTGFLD 196 Query: 208 NDRPSEHVIL-----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R + A+ +GD E ++ A+ Sbjct: 197 TPRGKGYAFAGPEFKDPKYFGEGAGIAVRKGDAELVGKLNAAIDAI 242 >gi|330889204|gb|EGH21865.1| arginine/ornithine ABC transporter periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. mori str. 301020] Length = 258 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 77/246 (31%), Gaps = 25/246 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L +L F+ LK GI FA +G GFD Sbjct: 1 MKKLMLIGAMALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + K ++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M I S+++L G I +Q G+ E + + Sbjct: 106 KYYNSPARLVMKDGTVISDSLAELKGKKIGMQRGSIHERFAREVLAPKG--VEVTPYGSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233 EI A R D D + L L D + P + A+ +G Sbjct: 164 NEIYLDIGAGRLDGTIADATLLQDGFLKTDAGKGYAFTG-PSFTDPKYFGDGIGIAVRKG 222 Query: 234 DTEWYN 239 D Sbjct: 223 DKANLE 228 >gi|167749244|ref|ZP_02421371.1| hypothetical protein EUBSIR_00195 [Eubacterium siraeum DSM 15702] gi|167657773|gb|EDS01903.1| hypothetical protein EUBSIR_00195 [Eubacterium siraeum DSM 15702] Length = 258 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 79/251 (31%), Gaps = 20/251 (7%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K IL ++ G L G + + N + G Sbjct: 1 MKIKRIIAGILVAATCGLAMAGCQSNT-----TGGKLIMATEPGFAPYEYMSGN-NVVGI 54 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD ++ + +++ ++ LA+Q ++D + T R + F Sbjct: 55 DVDIANEVAKELG---MELEIQSMDFDGALLAVQQGKVDFAAAGISVTPER--QEAMDFS 109 Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Q ++ K + S L G + +T +AD + ++K P + + Sbjct: 110 IEYAKSKQVIVVLKGANRVKSADDLGGDTKIAVQMST----VADTYVTDDLKKEPSRYTK 165 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + ++ + D D K IL + A A +G+TE Sbjct: 166 YVQAAEDLKSDKVDCIVMDE---LPAKEMVKGNDNLEILDGEVFTDKYAFAFKKGNTELE 222 Query: 239 NIVSWTHYAMV 249 V+ ++ Sbjct: 223 EKVNKVLQKLI 233 >gi|163758475|ref|ZP_02165563.1| putative periplasmic binding abc transporter protein [Hoeflea phototrophica DFL-43] gi|162284764|gb|EDQ35047.1| putative periplasmic binding abc transporter protein [Hoeflea phototrophica DFL-43] Length = 256 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 68/194 (35%), Gaps = 18/194 (9%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFC 64 ++ + + + + +A ++ G+ F E A+G+W G++++F Sbjct: 5 IITAIAAFGMTLAAQAASAET---------VRVGVAAEPYPPFTEPDASGNWTGWEIEFM 55 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 A+ + D P+ AL S +ID + + T R + F Y Sbjct: 56 NAVCAEAKLD---CVVTPVAWDGIIPALTSNKIDAIIGSMSITEER--MKTIDFSDKYYN 110 Query: 125 DGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 K GI + L+ I VQ T + + +F ++ +E + Sbjct: 111 TPSVIATAKDSGITPDAAGLADKIIGVQVSTIHQDYVTTHFGDA--VAEIKEYQTQDEAN 168 Query: 184 AAYRAHRCDAYTGD 197 A R DA D Sbjct: 169 QDLAAGRVDAIMAD 182 >gi|111017250|ref|YP_700222.1| ABC amino acid transporter, periplasmic substrate binding protein [Rhodococcus jostii RHA1] gi|110816780|gb|ABG92064.1| ABC amino acid transporter, periplasmic substrate binding protein [Rhodococcus jostii RHA1] Length = 329 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 77/238 (32%), Gaps = 11/238 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67 + LGDI+ RG + ++ F+ G GF VD R + Sbjct: 69 ACAAPASLRPGTPSFGGTLGDIRARGTVVVAVDQNTNLFSFRDPTTGTLTGFGVDLAREV 128 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + DP+K+++ PL + L + D++ R L F + + Sbjct: 129 ARDLLGDPTKVEFRPLGTDDGAEMLADRDADMVVRPVALPCQ--GLQDLTFSTVYLEASR 186 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 ++ GIS + L+ +C + L+ + ++ A + Sbjct: 187 RLVVRDGSGISGPADLARRRVCTHHDPASMSALSRIAPKA----TILAVPDWDDCLMAIQ 242 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + DA G L + I+ + A + G+ + V+ T Sbjct: 243 QRQADAVAGAAFL-AGLVAQDPN---LEIVGPETDSAQYAIGLAPGNDDLVRFVNGTL 296 >gi|257057821|ref|YP_003135653.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Saccharomonospora viridis DSM 43017] gi|256587693|gb|ACU98826.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Saccharomonospora viridis DSM 43017] Length = 272 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 89/260 (34%), Gaps = 21/260 (8%) Query: 1 MYKDF--FVSILCLIILFFTSFS----------TNASILGDIKKRGFLKCGINTGLVGFA 48 M + +++L L T+ S + A + G L + F Sbjct: 1 MARRLTRALTLLPAFALAITATSCAEEVNTGGDSEAGGEITLVNEGKLTTCTHLPYKPFQ 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 NG GFDVD ++ + + + + E AL + Q D+ + T Sbjct: 61 FT-ENGKTVGFDVDLVDLVAEELGVEQE-VFDTSFESIESGAALDTGQCDLAAAGMSITD 118 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 +R+ + F Y Q ++ K IS +S L G + VQ GTT E ++ + Sbjct: 119 VRKKVM--DFSEGYYDANQALLVKKGSDISDLSDLKGKVLGVQLGTTGEKYAEEHKEEFG 176 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 FE + + A + + A D S Y S+ + + + Sbjct: 177 Y--TTRQFEDLALLQTAVKTGQVAAGINDNSVFYDY---VKNNSDVEVTAEFETGEEYGI 231 Query: 229 AIIQGDTEWYNIVSWTHYAM 248 A+ +G+ ++ A Sbjct: 232 AVRKGNGALLAKINEVLDAA 251 >gi|260221299|emb|CBA29725.1| Histidine-binding periplasmic protein [Curvibacter putative symbiont of Hydra magnipapillata] Length = 235 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 78/219 (35%), Gaps = 14/219 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 +K I+ F A+G GFDVD AL I K +++ L +K Sbjct: 1 MKVAIDPTYEPFTFKSADGQPTGFDVDIANALCEQI---KRKCEFVEQVWDSMIPGLNAK 57 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 + D++ + T + + F Y ++ K + + + G I V G+T Sbjct: 58 KYDVIISSMSITD--DRLKEVDFTDKYYNTPSRIVLKKGTKFTDAASIKGKKIGVLKGST 115 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 E K + + +E +++ ++ R D D + L+ +++ Sbjct: 116 QEKYALGDLKPAGVIVN--SYEAQDQVYLDIKSGRLDGTVADYMEVTGGFLSKPEGAKY- 172 Query: 216 ILPDIISKSPL------APAIIQGDTEWYNIVSWTHYAM 248 L K P A+ +G+ + ++ A+ Sbjct: 173 ELVGPDLKMPQYFGYGAGIALRKGEDKLKGELNEAIKAI 211 >gi|90409073|ref|ZP_01217198.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Psychromonas sp. CNPT3] gi|90309830|gb|EAS37990.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Psychromonas sp. CNPT3] Length = 263 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 86/254 (33%), Gaps = 20/254 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L+ LF S + + K+ ++ G+ FA +A+G GFD Sbjct: 1 MKKIHISLAHVLVALFVLSVNVVQA-----KEWKEIRVGVEGAYPPFAITEADGSVSGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + +K Y+ + AL +++ D + D T R +AF Sbjct: 56 IDLTNALCEKM---NAKCTYIKQDWDGIIPALLARKFDAIIATMDITEAR--LKKVAFTD 110 Query: 121 ITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F+ K + G I VQ ++ + ++D + + + Sbjct: 111 KYQHIPARFVALKGTLYEETNAFMSGKKIGVQRASSMDTYVSD----NYPDAKIMRYGSA 166 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK-----SPLAPAIIQGD 234 + ++ R + D +A+ L + + ++ AI + D Sbjct: 167 NDAYLDLKSGRLNYVLADSAAITDGLLGKKGGDKFNFVGPKLNDPKWFGEGAGIAIRKQD 226 Query: 235 TEWYNIVSWTHYAM 248 + + A+ Sbjct: 227 KDLVEQFNRAIEAV 240 >gi|283953899|ref|ZP_06371428.1| CjaC [Campylobacter jejuni subsp. jejuni 414] gi|283794504|gb|EFC33244.1| CjaC [Campylobacter jejuni subsp. jejuni 414] Length = 251 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 74/237 (31%), Gaps = 16/237 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L+ LF + N S + LK G F N GFD Sbjct: 1 MKKISSIVLAALVGLFLGAC--NDSKNKESNASVELKVGTAPNYKPFNYK-ENSKLTGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR- 119 D ++ + KI ++ N AL++ +ID+++ T R + F Sbjct: 58 TDLVEEIAKK---NGIKIVWVETNFDGLISALKAGKIDMIASAMSATDER--RQNVDFTK 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 P + + + S L G I VQ GT L + + + Sbjct: 113 PYYISKNLYLKLKNNDSLQTKSDLEGKKIGVQLGT-----LQENTAKAIKNAQVQSNKDL 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 A + ++ DA D + P + L+ A + + Sbjct: 168 NIAVLALKNNKIDAIITDQDTAKGFLT--ENPELVSFYQETDGGEGLSFAFDKNKQK 222 >gi|238791256|ref|ZP_04634895.1| Amino acid-binding protein [Yersinia intermedia ATCC 29909] gi|238729389|gb|EEQ20904.1| Amino acid-binding protein [Yersinia intermedia ATCC 29909] Length = 262 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 35/251 (13%), Positives = 83/251 (33%), Gaps = 17/251 (6%) Query: 1 MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M+K + CL + + G F + +GF Sbjct: 1 MFKRLMLVGTCLAAVLSAGSAMAVEPTY---------VVGSGGTYRPFEYENSQKQLEGF 51 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D +A+ A + +++ + + F L S DI+ T R+ + F Sbjct: 52 DIDIIKAIGKA---EGFQVKLVNTPWEGIFATLGSGDRDIIISGITITDKRKQM--VDFS 106 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ K ++S++ L ++ V +T ++ ++D + F+ Sbjct: 107 DPYFPAEQTIVVAKGSKVNSIAALKDLNVGVVNSSTGDIVVSDVLGKN--STAIKRFDNT 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A GD+ T+ + ++ + A+ +G+ E Sbjct: 165 PLMLQELYEDGIAAAVGDVGVAKFYLKTHPEKAFELVSDTKFERQYFGIAVAKGNEELRT 224 Query: 240 IVSWTHYAMVT 250 ++ ++ Sbjct: 225 KINSGLQKIIA 235 >gi|291556970|emb|CBL34087.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Eubacterium siraeum V10Sc8a] Length = 281 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 79/251 (31%), Gaps = 20/251 (7%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K IL ++ G L G + + N + G Sbjct: 24 MKIKRIIAGILVAATCGLAMAGCQSNT-----TGGKLIMATEPGFAPYEYMSGN-NVVGI 77 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD ++ + +++ ++ LA+Q ++D + T R + F Sbjct: 78 DVDIANEVAKELG---MELEIQSMDFDGALLAVQQGKVDFAAAGISVTPER--QEAMDFS 132 Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Q ++ K + S L G + +T +AD + ++K P + + Sbjct: 133 IEYAKSKQVIVVLKGANRVKSADDLGGDTKIAVQMST----VADTYVTDDLKKEPSRYTK 188 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + ++ + D D K IL + A A +G+TE Sbjct: 189 YVQAAEDLKSDKVDCIVMDE---LPAKEMVKGNDNLEILDGEVFTDKYAFAFKKGNTELE 245 Query: 239 NIVSWTHYAMV 249 V+ ++ Sbjct: 246 EKVNKVLQKLI 256 >gi|160899821|ref|YP_001565403.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160365405|gb|ABX37018.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 318 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 8/197 (4%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFC 64 F +++ + + +++ IK+ G L+ G F+ + +G +GFD Sbjct: 52 FDALVAQGPVADAATIASSTWASKIKQTGTLRLGSTQTSNLFSLLNEKDGKIRGFDAGLA 111 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + L+ I D SK Q+ + + R L + Q D++ T R ++F Y Sbjct: 112 QLLTRYILGDASKYQFAQVTSSTREQVLINNQADMVIATYSITPARAE--KISFAGPYYT 169 Query: 125 DGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G ++ + S S L+G + QAG+T LA + F+ +E Sbjct: 170 SQAGVLVKASNKTVQSYSDLAGKKVATQAGSTGPAILAQHAPKA----VVQEFQTHQEAL 225 Query: 184 AAYRAHRCDAYTGDISA 200 + R R DAY D + Sbjct: 226 DSLRQGRVDAYVTDYTL 242 >gi|15673741|ref|NP_267915.1| glutamine ABC transporter permease and substrate binding protein [Lactococcus lactis subsp. lactis Il1403] gi|12724781|gb|AAK05857.1|AE006406_1 glutamine ABC transporter permease and substrate binding protein protein [Lactococcus lactis subsp. lactis Il1403] gi|326407245|gb|ADZ64316.1| glutamine ABC transporter permease/substrate-binding protein [Lactococcus lactis subsp. lactis CV56] Length = 714 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 35/250 (14%), Positives = 74/250 (29%), Gaps = 17/250 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K FF + L + + + +K +K ++ F W G D Sbjct: 1 MKKLFFALAMMLATVTAFLVAPS------VKAETTVKIASDSSYAPFEFQNGQKKWVGID 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + K++ L++ Q+D + T R+ + F Sbjct: 55 VDIMQEVAK---INDWKLEMSYPGFDAALQNLKAGQVDGIIAGMTITDERKET--FDFSN 109 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K +S S L G ++ + GT + L + K + + Sbjct: 110 PYYTSALTIATTKDSKLSDYSDLKGKAVGAKNGTAAQTWLQENQKKYGY--TIKTYSDGV 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + AA + ++ + + + P + + Sbjct: 168 HMFAALSSGNIAGAMDEVPVISYAMKQGQD----LAMNFPSISLPGGYGFAVMKGKNSTL 223 Query: 241 VSWTHYAMVT 250 V + A+ Sbjct: 224 VDGFNKALAE 233 Score = 92.5 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 65/220 (29%), Gaps = 9/220 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 K+ + F + + G DVD A++ + K+++ + + + Sbjct: 258 KKDVYTIASDNSFAPFEFQNDDKQFTGIDVDLLNAIAK---NQGFKLKWNFIGFQAAVDS 314 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 +QS D + T R+ P + I S L G ++ + Sbjct: 315 VQSGHADGMMSGMSITDARKQVFDYG-SPYYSSNLTIATSSTDDSIKSWKDLKGKTLGAK 373 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 GT + L + K + F + ++ +A D + K + Sbjct: 374 NGTASFDYLNAHAKEYGY--TVKTFTDATTMYSSLNNGSINALMDDEPVI---KYAIKQG 428 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 + I A+ +G + A + A Sbjct: 429 QKFATPIKPIPDGQYGFAVKKGSNPELIEMFNNGLANLRA 468 >gi|327461742|gb|EGF08073.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1] gi|327489027|gb|EGF20822.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1058] Length = 287 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 9/246 (3%) Query: 2 YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K + S+ + +L + +S ++ ++ G F+ +G G+D Sbjct: 16 KKTLKYFSLAVVSVLAIGALVACSSSSEKKTEKIKVEVGTVGTTKPFSYEDKDGKLTGYD 75 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ RA+ D ++ + F L S + I + N E + + Sbjct: 76 IEVLRAIFKD--SDKYEVNFNKTKWASIFSGLDSDRYQIGANNIS--YSEERANKYLYAS 131 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-- 178 + ++ K +GI S+ + G S V GT+T L DY K H+ I + Sbjct: 132 PYAKNPTVLVVRKGEGIKSLDDIGGKSTEVVQGTSTAQQLEDYNKEHSDNPTKINYTDGT 191 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237 +++I A R D + + + ++ + P I G + Sbjct: 192 IQQILANLNDGRTDYKVFER-ITVESIIKDQGLKNLEVIELPSDQQPYVYPIIASGQEDL 250 Query: 238 YNIVSW 243 V+ Sbjct: 251 QKFVNK 256 >gi|323525640|ref|YP_004227793.1| cationic amino acid ABC transporter periplasmic-binding protein [Burkholderia sp. CCGE1001] gi|323382642|gb|ADX54733.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. CCGE1001] Length = 264 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 95/259 (36%), Gaps = 23/259 (8%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + +++ DIK+ ++ G+ F +G+ +GFD+D A+ + + +K + Sbjct: 20 AAGSAMAADIKE---VRFGVEASYAPFESKSPSGELQGFDIDVGNAVCAKL---KAKCVW 73 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-S 139 + + ALQ+++ + ++ + T R + F Y I K G+ + Sbjct: 74 VENSFDGLIPALQARKFNAINSDMTITDQR--RQAIDFTDPIYTIPNQMIAKKGSGLQPT 131 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G + V GT E + + + ++ ++I A + R DA D Sbjct: 132 PASLKGKHVGVLQGTIQETYAKARWAPAGVD--VVPYQTQDQIYADLASGRLDASFQDAE 189 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEEL 254 A L + + +S L I +GD + ++ EL Sbjct: 190 AASKGFLKKPQGAGFEFAGPAVSDEKLLGAGVGFGIRRGDKALKDALNQALK------EL 243 Query: 255 GITQKNINQVSKDTTNPDV 273 I++ + + V Sbjct: 244 KADG-TIDRFAAKYFDVKV 261 >gi|119493144|ref|ZP_01624050.1| hypothetical protein L8106_08761 [Lyngbya sp. PCC 8106] gi|119452798|gb|EAW33974.1| hypothetical protein L8106_08761 [Lyngbya sp. PCC 8106] Length = 302 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 113/314 (35%), Gaps = 27/314 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M+ F ++ L +++ + A + + G + G + ++ ++ + + G+ Sbjct: 1 MFPKFLIAFLGILVALSFPTTAKAETVVEKAARTGIITMGGRSDVIPYSYINDKKELVGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPLN-AKERFLALQSKQIDILSRNTDWTLLREISLG 115 +D + + P ++Q+ +N E + +ID+ NT +T RE + Sbjct: 61 SLDVASLIEQEVSLYLGKPVEVQFQTINELSEVIPKTANGEIDLAC-NTQFTWQRE--MF 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + + G ++ K + L G I V + E TL K+ K + Sbjct: 118 VDYSMPYSLSGIRLLIKKGSLTGTPESLVGKRIAVLPNSLGESTL----KSFQPKAVLVT 173 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +++ A + + DA GD L ++ + + + + ++ Sbjct: 174 VAGIDQGIADLVSGKVDAIAGDSVVLAGNIQRVSETDYQLVPSAPYVRYAVGCMMPENNS 233 Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295 + N+V+ M+ I + + V ++LG I + KD+ Sbjct: 234 TFRNLVNLAIAKMLQG--YVIGETKYTDM--------VNKWLGPFGILEIPTE--IIKDY 281 Query: 296 TYRIIRHMGNYGEM 309 ++ NY ++ Sbjct: 282 FQTVLL---NYEQI 292 >gi|172056715|ref|YP_001813175.1| extracellular solute-binding protein [Exiguobacterium sibiricum 255-15] gi|171989236|gb|ACB60158.1| extracellular solute-binding protein family 3 [Exiguobacterium sibiricum 255-15] Length = 253 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 74/234 (31%), Gaps = 16/234 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +++ L + + AS K + G F G G+D Sbjct: 1 MKHGLKLAVAALSTAGVLA-ACGASNEEANKDEKVVTVGTEATYPPFTYK-EKGKLTGYD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ ++Y ++ K AL SK+ID+++ T R+ AF Sbjct: 59 IDVMNEVAKRAGYK---VEYKAMDFKGLIPALDSKRIDVIANQMGITDERKE--KYAFSD 113 Query: 121 ITYFDGQGFI-MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G I +K I ++ L G ++ G+ T + ++ Sbjct: 114 AYTVSGSTIIVNNKTNDIKTLEDLKGKTVGSTQGSLYAKTAEE------AGAKVKYYKGA 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 ++ A R DA D + + + + K+ + + Sbjct: 168 NQVLKDLEAGRVDAAMNDRLFVLTELKKAG--YKVKAVGETFDKNESGLMMAKN 219 >gi|94985164|ref|YP_604528.1| extracellular solute-binding protein [Deinococcus geothermalis DSM 11300] gi|94555445|gb|ABF45359.1| amino acid ABC transporter substrate-binding protein, PAAT family [Deinococcus geothermalis DSM 11300] Length = 252 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 45/228 (19%), Positives = 80/228 (35%), Gaps = 14/228 (6%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A +IK+ G +K F +K N GF+VD AL+ + P Q++ Sbjct: 20 QARTWDEIKQSGVIKIATEGAFPPFNLMKGN-QLTGFEVDLANALAKQLGLKP---QWVT 75 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + L + D + + T R+ + F Y G + + + Sbjct: 76 QPFDNLLIGLNQDRYDFVIASHGITPERQK--AVDFANPHYCTGGAIVTRSGGP-MTAAA 132 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G S+ VQ GTT ++ F + + AA A R DA+ GD Sbjct: 133 LKGKSVAVQVGTTYLQNVSKVPG----VGAVKTFPKDTDAQAALLAGRVDAWVGDKFTGL 188 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + D++ K + A+ +G+T ++ ++ Sbjct: 189 DVVKAQKGKLVQ---GDLLFKERIGMAVKKGNTTLLKELNSALATLMN 233 >gi|311279534|ref|YP_003941765.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] gi|308748729|gb|ADO48481.1| extracellular solute-binding protein family 3 [Enterobacter cloacae SCF1] Length = 257 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 80/252 (31%), Gaps = 27/252 (10%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + G L+ G+ F A G+ +GF Sbjct: 1 MKLKALILGMGLLCSLSSFAA-------------GELRFGVEAEYPPFESRNAAGELQGF 47 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D A+ A K ++ + L +K+ D ++ + T R + F Sbjct: 48 DIDLGNAICQAA---QLKCSWVETSFDALIPGLVAKKFDAINSAMNITEQRRK--SIDFT 102 Query: 120 PITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + G+ + L G +I V G+ E ++++ + ++ Sbjct: 103 QPIYRIPSQLVGKSGSGMEATPEGLKGKTIGVLQGSIQETFAKEHWEKQG--VTVVSYKD 160 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQG 233 A R DA +A A L+ + + ++ + + +G Sbjct: 161 QNLAWADLLNGRIDASLVMSAAGQAGFLSKPQGKGFGFIGKPVADDTILGSGIGFGLRKG 220 Query: 234 DTEWYNIVSWTH 245 D + Sbjct: 221 DDATKKQLDAAI 232 >gi|17230679|ref|NP_487227.1| glutamine-binding periplasmic protein of glutamine ABC transporter [Nostoc sp. PCC 7120] gi|17132282|dbj|BAB74886.1| glutamine-binding periplasmic protein of glutamine ABC transporter [Nostoc sp. PCC 7120] Length = 501 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 77/250 (30%), Gaps = 22/250 (8%) Query: 1 MYKDFFV---SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K F +L LI LF T S N S + L+ F G+ + Sbjct: 1 MSKRVFGRWCLVLSLICLFLTGCSGNLS------QGKTLRIATEPAFPPFEFTAQGGNLQ 54 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GF +D A++SA K+ + L ALQS+ +D + T R ++ Sbjct: 55 GFSIDLMNAIASAA---NLKVNFQSLPFDGIIPALQSRTVDAAISSITITAERAETVA-- 109 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + G + + L I VQ GTT A F Sbjct: 110 FSRPYFKAGLAIAIRSSNEDITGFDSLKNKKIAVQIGTTGAGKAKSIPGA-----QIRSF 164 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + DA D + ++ ++++ A Q Sbjct: 165 DSAPLALQELLNNNVDAVINDAPVTL-YAINTGNLQGIKVVEKLLTEEYYGIATAQNSP- 222 Query: 237 WYNIVSWTHY 246 + +++ Sbjct: 223 YLALINDGLN 232 >gi|323489288|ref|ZP_08094520.1| amino acid ABC transporter periplasmic protein [Planococcus donghaensis MPA1U2] gi|323397175|gb|EGA89989.1| amino acid ABC transporter periplasmic protein [Planococcus donghaensis MPA1U2] Length = 269 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 68/231 (29%), Gaps = 13/231 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 ++ + +L +++ G L G F A+G+ GFDV+ R ++ + + + Sbjct: 33 ASGSDLLTTVQEEGTLVIGTEGTYPPFTFHDASGELTGFDVEIAREVADRLGVEAE---F 89 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISS 139 L F L + + D+++ R F ++ I + Sbjct: 90 LETQWDAMFAGLDAGRFDMVANQVGINPER--QESYEFSSPYITSTAVLVVAEDNTDIET 147 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G + Q+ T+ A F A E + + R DA D Sbjct: 148 FEDLEG-KLSAQSLTSNYAETATSFGA-----ELEGVEGFNQAIELLNSGRVDATVNDNL 201 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + ++ + + + + M+ Sbjct: 202 TVLDFMKQRPDAKV-KVVDKSEEAAQSGLLFRKDSGAIVDEANKALADMIE 251 >gi|294676181|ref|YP_003576796.1| amino acid ABC transporter periplasmic amino acid-binding protein [Rhodobacter capsulatus SB 1003] gi|294475001|gb|ADE84389.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Rhodobacter capsulatus SB 1003] Length = 258 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 79/252 (31%), Gaps = 26/252 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L ++ T + L+ G F V+ +G GFD Sbjct: 1 MTLRSKLLACTLALVAMTGAAQAE----------KLRLGTEGAYPPFNFVQPDGTIAGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L I D + + + L +++ D + + T R+ +AF Sbjct: 51 LDIGLELCKRIGAD---CEVVAQDWDGIIPGLIAQKYDFIIASMFITEERK--QQVAFTN 105 Query: 121 ITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y ++ K+ + S LSG + Q+GTT ADY ++ Sbjct: 106 PYYMAAMTHVVPKESELTEFSNETLSGKVVGAQSGTTQ----ADYAVKMYPDADVRLYPT 161 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE-----HVILPDIISKSPLAPAIIQG 233 +E + R D GD+ L ++ I + A+ Q Sbjct: 162 QDEASLDMASGRLDVMVGDMLPLLDFVEKSEDGKCCKLAGAPITDPAFVGEGVGIAVRQE 221 Query: 234 DTEWYNIVSWTH 245 D ++ Sbjct: 222 DNALRERLNKAL 233 >gi|296276927|ref|ZP_06859434.1| amino acid ABC transporter, amino acid-binding protein [Staphylococcus aureus subsp. aureus MR1] Length = 259 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 75/256 (29%), Gaps = 13/256 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + FV I + IL +++ K + G F+ +G G+D Sbjct: 1 MKRLLFVMIAFVFILAACGNNSSKDK-EANKDSKTINVGTEGTYAPFSFHDKDGKLTGYD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A+ + K+++ + F L + + D+++ RE F Sbjct: 60 IDVIKAVDKE---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYK--FSK 114 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 F ++ +K I + G + Q T+ LA A + Sbjct: 115 PYTFSSAVLVIRENEKDIKDFDDVKGKKLA-QTFTSNYGKLAKDKGA-----DITKVDGF 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R D D + K I + + D E Sbjct: 169 NQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAKIKAIKGNAEQSRSAFAFSKKADDETVQ 228 Query: 240 IVSWTHYAMVTAEELG 255 + + EL Sbjct: 229 KFNDGLKKIEENGELA 244 >gi|294499526|ref|YP_003563226.1| sulfur-containing amino acid ABC transporter sulfur-containing amino acid-binding protein TcyJ [Bacillus megaterium QM B1551] gi|294349463|gb|ADE69792.1| sulfur-containing amino acid ABC transporter, sulfur-containing amino acid-binding protein TcyJ [Bacillus megaterium QM B1551] Length = 270 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 85/250 (34%), Gaps = 8/250 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGDWK 57 M K + + ++ + + TN S KK + G T + G Sbjct: 1 MKKYWLFLLSIVVAVSVSGCGTNVSSSAGKKKEKDVQTIVVGTGTQFPNICFIDDKGKLT 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+DV+ RA+ + D ++ + L+L+S +ID+++ N R+ Sbjct: 61 GYDVEVVRAIDKELKDYKF--EFKTMEFSNLLLSLESNKIDMIAHNMAQNAERKKKFLFN 118 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y + + I S+ L G + V A + + L Y + H K + Sbjct: 119 DETYNYSPLYVTVPKNRNDIHSLKDLEGKKMIVGATSNAAVYLDKYNQKHGNKIDVVYAG 178 Query: 178 R-VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + ++ + R DA ++ + + DI+ S + + D + Sbjct: 179 QGADDATTQLKTGRADATLATPFSIDFSNQALK--FQQKTVGDIVINSKVYFMFNKKDEK 236 Query: 237 WYNIVSWTHY 246 + V Sbjct: 237 LKSEVDQAIK 246 >gi|307730174|ref|YP_003907398.1| cationic amino acid ABC transporter periplasmic-binding protein [Burkholderia sp. CCGE1003] gi|307584709|gb|ADN58107.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. CCGE1003] Length = 264 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 19/236 (8%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T+ S A DIK+ ++ G+ F +G+ +GFD+D A+ + + + Sbjct: 19 VTAGSAMA---ADIKE---VRFGVEASYAPFESKSPSGELQGFDIDVGNAVCAKL---KA 69 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K ++ + ALQ+++ + ++ + T R + F Y I K G Sbjct: 70 KCVWVENSFDGLIPALQARKFNAINSDMTITEQR--RQAIDFTDPIYTIPNQMIAKKGSG 127 Query: 137 IS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + + + L G + V GT E + + + ++ ++I A + R DA Sbjct: 128 LQPTPASLKGKHVGVLQGTIQETYAKARWAPAGVD--VVPYQTQDQIYADLASGRLDASF 185 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246 D A L + + +S L I +GD + ++ Sbjct: 186 QDAEAASKGFLKKPQGAGFEFAGPAVSDEKLLGAGVGFGIRRGDKALKDALNEALK 241 >gi|225027101|ref|ZP_03716293.1| hypothetical protein EUBHAL_01357 [Eubacterium hallii DSM 3353] gi|224955565|gb|EEG36774.1| hypothetical protein EUBHAL_01357 [Eubacterium hallii DSM 3353] Length = 263 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 35/241 (14%), Positives = 65/241 (26%), Gaps = 13/241 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKK-----RGFLKCGINTGLVGFAEVKANGD 55 M K V++ +++L + ++++ + +T F + Sbjct: 1 MKKFLSVALAAVMMLSLAACGSSSNKAESSSEGGSASDKTYIIATDTTFAPFEFTNDKNE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G DVD A++ L AL+S Q D T R+ Sbjct: 61 FVGIDVDILAAIAKDQGFKYD---LQSLGFDAAVAALESGQADGTIAGMSITEERQK--K 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y + K I L G + + GT + Sbjct: 116 YDFSEAYYDSYVCMAVKKGSDIKGYEDLKGKKVAAKTGTQGADCAESLKDKYGFD--ITY 173 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + + A D + E V +P A+++G Sbjct: 174 FDDSATMYQDVKTGNTVACFEDQPVMAYGVSQ-GNGLEIVAEEKDNFSTPYGFAVLKGQN 232 Query: 236 E 236 Sbjct: 233 A 233 >gi|330807875|ref|YP_004352337.1| putative amino acid transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375983|gb|AEA67333.1| putative amino acid transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 260 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 90/252 (35%), Gaps = 19/252 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + K+ L+ G++ F A+G GFD Sbjct: 1 MKKALLTLSALALCMAAGVATA--------KEYKELRFGVDPSYAPFESKAADGSLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + + K +++ + L++ + D + + T RE + F Sbjct: 53 IDLGNAICAEL---KVKCKWVESDFDGMIPGLKANKFDGVISSMTVTPAREK--AIDFSS 107 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + ++ K G+ V+ L G ++ + GT E +K ++ Sbjct: 108 ELFSGPTAYVFKKGSGLSEDVASLKGKTVGYEQGTIQEAYAKAVLDKAGVKTQ--AYQNQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH---VILPDIISKSPLAPAIIQGDTE 236 +++ + + R DA D+ L + + + + + + A I +G++E Sbjct: 166 DQVYSDLTSGRLDAAIQDMLQAELGFLKSPKGEGYEISKPVDSELLPAKTAIGIKKGNSE 225 Query: 237 WYNIVSWTHYAM 248 ++ A+ Sbjct: 226 LKALLDKGIKAL 237 >gi|269139652|ref|YP_003296353.1| glutamine ABC transporter periplasmic protein [Edwardsiella tarda EIB202] gi|267985313|gb|ACY85142.1| glutamine ABC transporter periplasmic protein [Edwardsiella tarda EIB202] gi|304559522|gb|ADM42186.1| Glutamine ABC transporter, periplasmic glutamine-binding protein [Edwardsiella tarda FL6-60] Length = 248 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 70/212 (33%), Gaps = 12/212 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L +T V F K + + GFD+D A++ + P++ ALQ++ Sbjct: 27 LIVATDTAFVPFEFKKGD-KYVGFDIDLWDAIAKQL---HLSYTLKPMDFSGIIPALQTR 82 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGT 154 +D+ T R+ + F Y G ++ I V L G + V++GT Sbjct: 83 NVDLALAGISITEERKK--AIDFSDGYYNSGLMVMVKSDNAQIHGVKDLDGKVLAVKSGT 140 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 DY KAH F ++ R DA D + T + Sbjct: 141 AGV----DYAKAHVKSKDLRQFPNIDNAYLELATGRADAVLHDTPNILYFIKTAGNG-QF 195 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + D + A +G V+ Sbjct: 196 KAVGDSLEAQAYGIAFPKGSDALREQVNGALK 227 >gi|27367224|ref|NP_762751.1| arginine ABC transporter periplasmic arginine-binding protein artI [Vibrio vulnificus CMCP6] gi|27358792|gb|AAO07741.1| Arginine ABC transporter, periplasmic arginine-binding protein ArtI [Vibrio vulnificus CMCP6] Length = 243 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 85/257 (33%), Gaps = 25/257 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L+ S NA+ +IK + F + N +GFD Sbjct: 1 MKKILLASLIGLV-------SANAAAQQEIK------FAMEATYAPFEYMDENNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + + AL+ K+ D D T R +AF Sbjct: 48 VDLANALCQQL---DASCSFHNQAFDSLIPALKFKRYDAAISAMDITDAR--LEQVAFSD 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ ++ + L G + VQ G+T + L + + + + Sbjct: 103 AYYDNSAAFVSFAG-KVADQAALKGKRVGVQNGSTHQSFLLEQM----TGVTAVPYASYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238 + + R D+ GD + + + + + + A+ + + Sbjct: 158 DAFLDMKNGRIDSVFGDTAVVAEWFKKENNLAYVGEHVTNAQYFGNGFGIAVNKDNQALV 217 Query: 239 NIVSWTHYAMVTAEELG 255 + ++ A+ E Sbjct: 218 DQLNAALKAVKANGEYQ 234 >gi|307257739|ref|ZP_07539496.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863645|gb|EFM95571.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 260 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 65/200 (32%), Gaps = 12/200 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K V + I L ++ S L I +G + G F A+G G+ Sbjct: 1 MLKKLSVIAVSAIALATSATSLAKETLLERINAKGTITVGTEGTYAPFTYHDASGKLTGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ RA++ + + + L++ + D+++ T E Sbjct: 61 DVEVTRAVAEKLGVK---VDFKETQWDAMLAGLKADRFDLVANQVGLT-TPERQATFDKS 116 Query: 120 PITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G ++ + I S + G Q ++ LA A + + Sbjct: 117 AAYSWSGAALVVRNDEQKIKQASDVKGVKTA-QTLSSNYGELARANGA-----DIVPIDG 170 Query: 179 VEEIDAAYRAHRCDAYTGDI 198 + + + R DA D Sbjct: 171 MAQGLLLIQQKRADATFNDN 190 >gi|282857868|ref|ZP_06267074.1| extracellular solute-binding protein, family 3 [Pyramidobacter piscolens W5455] gi|282584250|gb|EFB89612.1| extracellular solute-binding protein, family 3 [Pyramidobacter piscolens W5455] Length = 249 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 91/256 (35%), Gaps = 17/256 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+K S++ ++ + + AS + L G + + +GD GFD Sbjct: 1 MWKRI--SVVAAFSVWIAAAAFAASAMDK----ETLIVGTSGAYPPYEFHGQSGDLVGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + +Q+L + +L + +ID++S T R ++F Sbjct: 55 VDMTEAIARKLGKK---LQWLDMPFDSLLPSLMADKIDLVSAGLSATPERAK--RVSFSS 109 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 F+ S L+G ++ VQ GT + + F +++ + Sbjct: 110 PYEISYSAFVTRVDYQPKSADDLAGKTVAVQIGT-----VQETFARALGNVEVKTYQKFD 164 Query: 181 EIDAAYRAHRCDAYTGDISALYAL-KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E R DA I A A K + + I+ + A AI + + E Sbjct: 165 ECVREVALGRVDATLMGIPAAKAYVKAKDFDGKIAIAFNRQITGADKAIAISKKNVELTA 224 Query: 240 IVSWTHYAMVTAEELG 255 VS M EL Sbjct: 225 AVSRIIEEMDKNGELQ 240 >gi|224826259|ref|ZP_03699361.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] gi|224601360|gb|EEG07541.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum 2002] Length = 254 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 36/242 (14%), Positives = 77/242 (31%), Gaps = 21/242 (8%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L L +L + A ++ + F+++ +G GFD D RAL Sbjct: 6 VLTLTLLCALPWLAQAQT---------VRIVTDASYPPFSKMNPDGSITGFDPDITRALC 56 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + + + ++ ALQ+K+ D+ + T R + F + + Sbjct: 57 AEA---KLECELKAMDFDGIIPALQAKKFDVAIASMSITPERAKV--VDFSDMYFKIPGR 111 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + + I+ G I V +T + V+ ++ + Sbjct: 112 LMAREGTQINDA-WFKGKKIGVLRSSTQMQEANAKWAPKG--SQIKVYSKITDAFLDLTG 168 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWYNIVSWT 244 R DA D + + L + + + A A+ +G+ E ++ Sbjct: 169 QRLDAVYLDATIGESDFLQKPMGKGFAFVGPVYNDPKYYMGAAMAVGKGNKELRAKLNAA 228 Query: 245 HY 246 Sbjct: 229 LK 230 >gi|322373408|ref|ZP_08047944.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus sp. C150] gi|321278450|gb|EFX55519.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus sp. C150] Length = 731 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 64/210 (30%), Gaps = 15/210 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + +FF + ++ + +T F ++ +KG D Sbjct: 1 MKKKLLTLFLSAMSVFFVFGAKASAS--------TISVVSDTAYAPFEFKDSDQTYKGID 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ D + A+Q+ Q D L T T R+ F Sbjct: 53 VDIINEVAKREKWD---VNQTYPGFDAAVNAVQAGQADALMAGTTVTDARKKV--FTFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y IS QL G ++ V+ GT + L + F+ + Sbjct: 108 TYYDTSIVIYTRSSDKISDYKQLKGKTVGVKNGTAAQSWLDKNASKYGF--TVKTFDTSD 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + + DA D + Sbjct: 166 LMNNSLDSGSVDAAMDDTPVVQYAIGQGKD 195 Score = 99.4 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 55/179 (30%), Gaps = 7/179 (3%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + +++ F +G + G DVD A++ + ++ A Sbjct: 273 AKETYTISMDSSFAPFEYQNGSGKYVGIDVDIINAIAK---NQGFNVKLTNPGFDASLNA 329 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 +QS Q D + T R+ F Y + K + L G +I + Sbjct: 330 VQSSQADAVLAGMTITDARK--QIFDFSDPYYTSNIRLAVKKGSNVKKYEDLKGKTIGAK 387 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 GT++ L + + ++ + + + DA D + L Sbjct: 388 NGTSSYSWLEENADKYGF--TLRAYDEASTMYDSLNSGSIDALMDDEAVLLYAIQQGRN 444 >gi|257463484|ref|ZP_05627878.1| amino acid-binding protein [Fusobacterium sp. D12] Length = 238 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 80/245 (32%), Gaps = 27/245 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +F + + ++ F+ L G N F + G GFD Sbjct: 3 MMK-YFGMFILMGMMSAVMFA------------KTLYVGTNAEFAPFEYL-EKGKITGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ AL+ + D I+ + ALQ K++D++ T R+ + F Sbjct: 49 IELMNALAKEMKMD---IKIENMAFDGLLPALQMKKVDVVIAGMTETPERKK--AVNFTK 103 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q I K K I +LSG + V G T + ++D A F+ Sbjct: 104 PYFKAKQVIITKKGKDIKDFQELSGKKVGVMLGFTGDAVVSDIKGAK-----VQRFDATY 158 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + DA D + + I + A A+ + D Sbjct: 159 SAVMALENGKVDAVVADSEPAKKYIASYK---DLSIASAKAEEEDYAIAVRKNDKVLLEN 215 Query: 241 VSWTH 245 ++ Sbjct: 216 LNKAM 220 >gi|260777099|ref|ZP_05885993.1| amino acid ABC transporter amino acid-binding protein [Vibrio coralliilyticus ATCC BAA-450] gi|260606765|gb|EEX33039.1| amino acid ABC transporter amino acid-binding protein [Vibrio coralliilyticus ATCC BAA-450] Length = 279 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 81/246 (32%), Gaps = 8/246 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 +K ++L L + T ++ L I +RG L+ G++T V +A GD GF++ Sbjct: 14 FKQAITALLGLAVALPT-LASETPNLDKINERGTLRVGMST-FVPWAMRDKQGDLIGFEI 71 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D L++ ++++P AL +K+ D++ T R S + F Sbjct: 72 DVAERLAADSGWK---VEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTTP 126 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G +K+ S V+ + K + F+ + Sbjct: 127 YSHSGVQVAANKELASGFSEMSDFNSRRVKIAARRGAFTVQVAREAFPKAKILQFDDDAQ 186 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + N + + +SK A A+ G+++ Sbjct: 187 AFQEVLNGNAHAVIASSPKPEHEAVKNADKL-FIPFNERLSKGNEAFAVRLGESDKQAFF 245 Query: 242 SWTHYA 247 A Sbjct: 246 DQWIQA 251 >gi|255589615|ref|XP_002535024.1| ATP binding cassette (abc) transporter, putative [Ricinus communis] gi|223524174|gb|EEF27358.1| ATP binding cassette (abc) transporter, putative [Ricinus communis] Length = 437 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 68/175 (38%), Gaps = 10/175 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L +IK +G L CG+ + F G+D++ C+ +++ + P + + Sbjct: 29 DQLQNIKSKGILTCGVLGTVPPFGYQDPKTRKPIGYDIEICKIVANHLGVKP---IFKVI 85 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + R + +ID+++ + WT R + + + Y +S +QL Sbjct: 86 SPAARIPEVDQGRIDVITGSLGWTPAR--AQQVDYSYSYYVTETVLGFPADAKFTSWNQL 143 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 +G I TT+ A + K I F+ V + A R + DA D Sbjct: 144 AGKRIGAVNSTTS----AAAAREKLPKSSVITFDDVAQAFLALRQRKTDAVAMDE 194 >gi|296875916|ref|ZP_06899976.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus parasanguinis ATCC 15912] gi|296433078|gb|EFH18865.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus parasanguinis ATCC 15912] Length = 275 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 82/245 (33%), Gaps = 8/245 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K S L L+ + TS S + ++ G F+ + +G G+++ Sbjct: 4 KKVIKYSTLGLVAVLATSALVACSSGKSASGKKTIEVGTVGTTKPFSYEEKDGKLTGYEI 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + R + D ++ + F L S + I + N ++ RE + Sbjct: 64 EVLREIFK--GSDKYEVNFNKTEWSSVFAGLDSDRFQIGANNISYSKEREE--KYLYPNP 119 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER--V 179 + ++ K I S+ L G V GT+T L DY K H+ + + + Sbjct: 120 YARNPLVLVVPKDSSIKSLDDLGGKKTEVVQGTSTAKQLEDYNKKHSDNPTNLQYTDGTI 179 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEWY 238 + I A R D + + + ++ + P I + D + Sbjct: 180 QTIMANLADGRTDYKIFER-ISVDTIIRDQGYDNLKVIELPSDQQPYVYPIIAKEDKDLQ 238 Query: 239 NIVSW 243 V+ Sbjct: 239 KFVNK 243 >gi|241663976|ref|YP_002982336.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|240866003|gb|ACS63664.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12D] Length = 254 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 70/210 (33%), Gaps = 12/210 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L+ + V NG GFDVD AL+ + +++ ++ K L S+ Sbjct: 35 LRVATDATFAPMEFV-ENGKRTGFDVDLIEALARTMG---RPVEWTDIDFKGLVPGLISR 90 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 + D+ T R+ + P + + I + + L+G + VQ GT Sbjct: 91 RFDVAISGIYITEERKKVVDFT-VPYYHGGLVAMVKQGNTAIKTPADLNGKKVSVQVGTK 149 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 + L K + K + E+ E++ R DA A Sbjct: 150 SVNYL----KENYPKVERVEVEKNEQMFNLVEIGRADAAVTGRPAAAYYVKARPG---LR 202 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 ++ ++ A+ + E ++ Sbjct: 203 LVEPALTSEEYGIAVRRDQPELTKALNAAL 232 >gi|187929867|ref|YP_001900354.1| family 3 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|187726757|gb|ACD27922.1| extracellular solute-binding protein family 3 [Ralstonia pickettii 12J] Length = 254 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 69/210 (32%), Gaps = 12/210 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L+ + V NG GFDVD AL+ + +++ ++ K L S+ Sbjct: 35 LRVATDATFAPMEFV-ENGKRTGFDVDLIDALARTLG---RPVEWTDIDFKGLVPGLISR 90 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 + D+ T R+ + P + + I + + L+G + VQ GT Sbjct: 91 RFDVAISGIYITEERKKVVDFT-VPYYHGGLVALVKQGNTAIKTPADLNGKKVSVQVGTK 149 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 + L + + K + E+ E+ R DA A Sbjct: 150 SVNYL----RENYPKVERVEVEKNNEMFNLVEIGRADAAVTGRPAAAYYVKARPG---LR 202 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 ++ ++ A+ + E ++ Sbjct: 203 LVEPALTTEEYGIAVRRDQPELTKALNAAL 232 >gi|323493013|ref|ZP_08098149.1| prephrenate dehydratase [Vibrio brasiliensis LMG 20546] gi|323312749|gb|EGA65877.1| prephrenate dehydratase [Vibrio brasiliensis LMG 20546] Length = 258 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 77/245 (31%), Gaps = 14/245 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K L + +L S L DI +G L+ G ++GF Sbjct: 1 MKKYIL--ALGMCLLSVGQAMAETSRLHDILDKGVLRVGTTGDWNPMTMKDPATNSYRGF 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D L+ + + ++Y+ + K + + + D ++ + + R G + Sbjct: 59 DIDVTTELAKDLGVE---VEYVATDWKTLVNGITANKYD-ITGSASLNMSRAKVAGYSQP 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFE 177 S A + V A T E + ++F + IV E Sbjct: 115 YFYLAFVPVVQKKDLAKFSDWGDFDKAEVKVAATLGTVQEKMVKEFFPSAQH----IVIE 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A R D L + V + + +P+A + Q D W Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVEKFKQ-LAIVPVKEPRKPTPIAMLLPQDDQVW 229 Query: 238 YNIVS 242 N ++ Sbjct: 230 INYLN 234 >gi|158424306|ref|YP_001525598.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] gi|158331195|dbj|BAF88680.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS 571] Length = 269 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 32/228 (14%), Positives = 75/228 (32%), Gaps = 13/228 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A L +I K G ++ G+N L + + GFDVD+ ++ + +Q Sbjct: 23 AAEARTLDEIMKSGVIRVGVNPTLPPLGKFDDKNEIVGFDVDYAGEIAKLLGVKLEVVQ- 81 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + +R + + +ID + R + F + + G + K + Sbjct: 82 --VGSPDRIPFVTAGKIDFVMGAMTRNTDRAKV--IDFTVPVHTEVLGVLTTKANTFTDW 137 Query: 141 SQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 Q + G+T + + + + + A R A I Sbjct: 138 RQFDDPSVTFVQVRGSTPVKFIEENLPKAK----VTLLDNYPDAVRALAQGRGTAMIDVI 193 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + + I+ I + + +G T + ++ + Sbjct: 194 DFM--GEHMSKHKVDWRIVETPIDVYYCSLGVAKGSTGLKDWLNVAIF 239 >gi|121594463|ref|YP_986359.1| extracellular solute-binding protein [Acidovorax sp. JS42] gi|120606543|gb|ABM42283.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax sp. JS42] Length = 290 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 34/239 (14%), Positives = 67/239 (28%), Gaps = 19/239 (7%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 L+++ + +A +L D+ +RG L+ + F + G GF+ + L++ Sbjct: 41 LLMLVSLAAPLAHAELLDDVHQRGALRIALEGTYPPFNFKQG-GKLTGFETELGELLAAE 99 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + P ++ LQS + DI R F I Sbjct: 100 LEVKPE---FVTTEWSGILAGLQSGKYDIALNQVSVNEQRRKV--FDFSEPYTISSAQLI 154 Query: 131 MHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + S+ L G + V GT + + E + Sbjct: 155 VRADDTRQFRSLEDLKGLKLGVGQGTNYADLAKSVA-----GINVRTYPGAPEYLQDLAS 209 Query: 189 HRCDAYTGDISA--LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R DA D + + P P + + ++ ++ Sbjct: 210 KRIDAALNDRLLIPFAIREAKLPVKPGAAVGPVANMAIPY----RKNNPKFGEALNAAL 264 >gi|303246937|ref|ZP_07333213.1| extracellular solute-binding protein family 3 [Desulfovibrio fructosovorans JJ] gi|302491644|gb|EFL51527.1| extracellular solute-binding protein family 3 [Desulfovibrio fructosovorans JJ] Length = 291 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 43/255 (16%), Positives = 86/255 (33%), Gaps = 18/255 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWK 57 K S+LC L F+ + AS+ I+K G + G+N + Sbjct: 11 KRKLASLLCGFALLFSGTAFAASLHDMLPDSIQKSGKIIIGVNGIFPPMEFKAPGSDTLD 70 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV+ +A++ + KI++ N + ++ +K++D++ E L Sbjct: 71 GIDVELAQAIAKELG---IKIEFDDQNFDQLINSINTKRVDMVLSGMS--DSAERRKSLD 125 Query: 118 FRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-----NMKY 171 F Q F I ++ LSG ++ V A T T+ + K + Sbjct: 126 FIDYFNSGTQCFTTKALAGKIKNLEDLSGKTLAVSASTDYLTTMQKWNKENLLDKGKPGI 185 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + + R A +S + V + ++ +P A Sbjct: 186 NIMAVDSAASARMQMLQGRAQA--SALSPEALGWANVQQKGAFVAVGPLLESNPYGIAFS 243 Query: 232 QGDTEWYNIVSWTHY 246 + + + + V Sbjct: 244 KDNAKLRDAVYAALQ 258 >gi|296268321|ref|YP_003650953.1| extracellular solute-binding protein family 3 [Thermobispora bispora DSM 43833] gi|296091108|gb|ADG87060.1| extracellular solute-binding protein family 3 [Thermobispora bispora DSM 43833] Length = 282 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 84/256 (32%), Gaps = 25/256 (9%) Query: 6 FVSILCLIILFFTSFSTNASILG-------------DIKKRGFLKCGINTGLVGFAEVKA 52 + + L + + G L N F + Sbjct: 13 IGATALITALMVAACGGGGDTTASSPSEAASAAGGVKLVNPGKLTTCTNIPYEPFQFQQG 72 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + GFDVD +++ + + A + AL + + D+ + T R+ Sbjct: 73 D-KIVGFDVDIVDLVANKLGVQQEIVDIDF-AAIKSGAALNAGKCDVAAAGMTITEERK- 129 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMK 170 L F + Q + K G++S+ + G + QA TT + + Sbjct: 130 -QNLDFSVPYFDASQALMAKKGSGVTSLDDVKAKGLKLGAQASTTGLDYVK------SQG 182 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + PI F ++ +A R D D+ + + +E+ ++ + + + Sbjct: 183 FEPIEFADSQKQLNGLQAGRVDVIVQDLPVVLTWLKKPEISAEYEMVGSLDTGEQYGIGL 242 Query: 231 IQGDTEWYNIVSWTHY 246 +G+TE N+V+ Sbjct: 243 KKGNTELLNVVNEVIN 258 >gi|126435629|ref|YP_001071320.1| extracellular solute-binding protein [Mycobacterium sp. JLS] gi|126235429|gb|ABN98829.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. JLS] Length = 311 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 43/243 (17%), Positives = 76/243 (31%), Gaps = 16/243 (6%) Query: 24 ASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A+ L IK RG L G+N +G GFDVD A++S + Y Sbjct: 61 ANTLPQPIKDRGSLIVGVNVPYAPNEFKDPSGKIVGFDVDLMNAIASTLGVTAE---YRE 117 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ ++Q D+ + T RE + F + G + GI + Sbjct: 118 SDFEKIIPSIQGGTYDVGMSSFTDTKEREA--SVDFV-TYFSAGIQWAQKAGAGI-DPAN 173 Query: 143 LSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 G + VQ+ T E A + F+ + + A + DA + D Sbjct: 174 ACGKRVAVQSTTIEETEELPAKSKACTDAGKPAIEIVKFDEQDAVANAVVLGQADAMSAD 233 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + +I +P + +G + ++ Sbjct: 234 SPVTA--YAVKQSNGKLETAGEIFDAAPYGWPVAKGSP-LGQSLQQALEHLIETGAYEQI 290 Query: 258 QKN 260 KN Sbjct: 291 AKN 293 >gi|22125570|ref|NP_668993.1| glutamine ABC transporter periplasmic protein [Yersinia pestis KIM 10] gi|45442117|ref|NP_993656.1| glutamine ABC transporter periplasmic protein [Yersinia pestis biovar Microtus str. 91001] gi|108807999|ref|YP_651915.1| glutamine ABC transporter periplasmic protein [Yersinia pestis Antiqua] gi|108812269|ref|YP_648036.1| glutamine ABC transporter periplasmic protein [Yersinia pestis Nepal516] gi|145599204|ref|YP_001163280.1| glutamine ABC transporter periplasmic protein [Yersinia pestis Pestoides F] gi|149365579|ref|ZP_01887614.1| putative glutamine-binding periplasmic protein [Yersinia pestis CA88-4125] gi|162419528|ref|YP_001606262.1| glutamine ABC transporter periplasmic protein [Yersinia pestis Angola] gi|165925483|ref|ZP_02221315.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165937648|ref|ZP_02226210.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|166008226|ref|ZP_02229124.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166213794|ref|ZP_02239829.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167399071|ref|ZP_02304595.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422253|ref|ZP_02314006.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426965|ref|ZP_02318718.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167466397|ref|ZP_02331101.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Yersinia pestis FV-1] gi|170023841|ref|YP_001720346.1| glutamine ABC transporter periplasmic protein [Yersinia pseudotuberculosis YPIII] gi|218929601|ref|YP_002347476.1| glutamine ABC transporter periplasmic protein [Yersinia pestis CO92] gi|229838046|ref|ZP_04458205.1| glutamine transporter subunit; periplasmic binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895245|ref|ZP_04510419.1| glutamine transporter subunit; periplasmic binding component of ABC superfamily [Yersinia pestis Pestoides A] gi|229898606|ref|ZP_04513751.1| glutamine transporter subunit; periplasmic binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229902605|ref|ZP_04517722.1| glutamine transporter subunit; periplasmic binding component of ABC superfamily [Yersinia pestis Nepal516] gi|270490214|ref|ZP_06207288.1| glutamine ABC transporter periplasmic protein [Yersinia pestis KIM D27] gi|294504264|ref|YP_003568326.1| glutamine ABC transporter periplasmic-binding protein [Yersinia pestis Z176003] gi|21958473|gb|AAM85244.1|AE013770_10 glutamine-binding periplasmic protein for high-affinity glutamine ABC transporter [Yersinia pestis KIM 10] gi|45436980|gb|AAS62533.1| putative glutamine-binding periplasmic protein [Yersinia pestis biovar Microtus str. 91001] gi|108775917|gb|ABG18436.1| glutamine-binding periplasmic protein [Yersinia pestis Nepal516] gi|108779912|gb|ABG13970.1| putative glutamine-binding periplasmic protein [Yersinia pestis Antiqua] gi|115348212|emb|CAL21140.1| putative glutamine-binding periplasmic protein [Yersinia pestis CO92] gi|145210900|gb|ABP40307.1| glutamine-binding periplasmic protein [Yersinia pestis Pestoides F] gi|149291992|gb|EDM42066.1| putative glutamine-binding periplasmic protein [Yersinia pestis CA88-4125] gi|162352343|gb|ABX86291.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Yersinia pestis Angola] gi|165914398|gb|EDR33013.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|165922592|gb|EDR39743.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165992608|gb|EDR44909.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166204968|gb|EDR49448.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166958759|gb|EDR55780.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051575|gb|EDR62983.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054067|gb|EDR63895.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750375|gb|ACA67893.1| cationic amino acid ABC transporter, periplasmic binding protein [Yersinia pseudotuberculosis YPIII] gi|229680052|gb|EEO76151.1| glutamine transporter subunit; periplasmic binding component of ABC superfamily [Yersinia pestis Nepal516] gi|229688154|gb|EEO80225.1| glutamine transporter subunit; periplasmic binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229694412|gb|EEO84459.1| glutamine transporter subunit; periplasmic binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701731|gb|EEO89756.1| glutamine transporter subunit; periplasmic binding component of ABC superfamily [Yersinia pestis Pestoides A] gi|262362383|gb|ACY59104.1| glutamine ABC transporter periplasmic-binding protein [Yersinia pestis D106004] gi|262366309|gb|ACY62866.1| glutamine ABC transporter periplasmic-binding protein [Yersinia pestis D182038] gi|270338718|gb|EFA49495.1| glutamine ABC transporter periplasmic protein [Yersinia pestis KIM D27] gi|294354723|gb|ADE65064.1| glutamine ABC transporter periplasmic-binding protein [Yersinia pestis Z176003] gi|320014658|gb|ADV98229.1| glutamine transporter subunit; periplasmic binding component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 247 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 77/220 (35%), Gaps = 13/220 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 L +T V F + + + GFD+D A++ + K P++ A Sbjct: 23 AEKELIVATDTAFVPFEFKQGD-KYVGFDIDLWDAIAKKL---DLKYTLKPMDFSGIIPA 78 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICV 150 LQ+K +D+ T R+ + F Y G ++ I S + L G + V Sbjct: 79 LQTKNVDLALAGITITDERKK--AVDFSDGYYNSGLLVMVKADNNDIKSEADLQGKVLAV 136 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++GT + DY KA+ F ++ R DA D + T Sbjct: 137 KSGTGSV----DYAKANIKTKDLRQFPNIDNAYLELGTGRADAVLHDTPNILYFIKTAGN 192 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + + + I A QG ++ V+ ++ Sbjct: 193 G-QFKAVGESIKAQQYGVAFPQG-SDLREKVNAALKSLKE 230 >gi|304396804|ref|ZP_07378684.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] gi|304355600|gb|EFM19967.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] Length = 275 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 79/241 (32%), Gaps = 17/241 (7%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L DIK G + GI+ + NG+ G+ V R+ + + + + Sbjct: 20 DTLTDIKSAGKITVGIDPTFPPYEYTSDNGEVTGYSVAIMRSFADDLGVK---LVFQKTA 76 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS------ 138 L S + + + T R + F G +M K Sbjct: 77 FSGILPGLISGSFNAEGSSLNVTAERAK--KVLFTVPYSKTVNGVLMRKSDAEKISKSGL 134 Query: 139 SVSQLSGASICVQAGTTTELTLADYF----KAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 S +LSG V++ + E L + KA I + +++ + R D Sbjct: 135 SPERLSGLRGAVKSASVPEQLLKSFNEALKKAGKPPITIISVDTLDQTVSTLMTKRADFV 194 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 DI+ L + P + V ++ +A A + D +S AM + +L Sbjct: 195 LDDIAVLAPIVKKY--PDKLVQAGEVGPSQWMAWATRKEDLSLNKAISDHILAMQQSGKL 252 Query: 255 G 255 Sbjct: 253 A 253 >gi|170718983|ref|YP_001783436.1| extracellular solute-binding protein [Haemophilus somnus 2336] gi|168827112|gb|ACA32483.1| extracellular solute-binding protein family 3 [Haemophilus somnus 2336] Length = 260 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 67/210 (31%), Gaps = 11/210 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K F+ I+ T AS+L I +G + G F + G G+DV Sbjct: 3 KKITFLFTTVFAIVANTQALAQASLLDRINNKGTITVGTEGTYAPFTYHDSTGKLTGYDV 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + RA++ + +++ L++ + D+++ T E Sbjct: 63 EVTRAVAKKLG---VTVEFKETQWDAMLAGLKAGRFDLVANQVALT-TPERQATFDKSEP 118 Query: 122 TYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + G + + I V + G Q ++ LA ++A + + + Sbjct: 119 YSWSGAMLVARDNETRIKQVEDVKGLK-AAQTLSSNYGELAQKYQAK-----IVPIDGMA 172 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + R D D AL Sbjct: 173 QGLLLIQQKRADMTFNDALALLDYLKKYPN 202 >gi|160936155|ref|ZP_02083528.1| hypothetical protein CLOBOL_01051 [Clostridium bolteae ATCC BAA-613] gi|158440965|gb|EDP18689.1| hypothetical protein CLOBOL_01051 [Clostridium bolteae ATCC BAA-613] Length = 296 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 40/279 (14%), Positives = 82/279 (29%), Gaps = 45/279 (16%) Query: 1 MYKDFF-VSILCLIILFFTSFSTNA----------------SILGDIKKR---------- 33 M K +++ L+ T+ A + + K Sbjct: 11 MKKKVLAITMAALMAASLTACGGGAKETTAAATTAEEKAEDTTAAESKDETSAEAAETEA 70 Query: 34 ------GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 G L N + + G D + +A++ + +++ + Sbjct: 71 AKEAAGGKLVMATNAEFPPYEYHDGD-AIVGIDAEIAKAIADELG---MELEIEDIAFDS 126 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 + S + D+ T + + F Q I+ + I+S L G Sbjct: 127 IIPEIVSGKADMGLAGMTVTE--DRMQSVDFSDTYAKASQKIIVTEDSEIASPDDLKGVI 184 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + VQ GTT ++ ++D + + E A + DA D Sbjct: 185 VGVQLGTTGDIYVSDLEA---DGTTVERYNKGFEAVQALSQGKIDAVVIDGEPAKTFVAE 241 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + IL + + A A+ +G+TE ++ Sbjct: 242 TEG---LKILDESFTDEEYAIAVKKGNTELLEKINGALK 277 >gi|304397038|ref|ZP_07378917.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. aB] gi|304355187|gb|EFM19555.1| cationic amino acid ABC transporter, periplasmic binding protein [Pantoea sp. aB] Length = 243 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 80/248 (32%), Gaps = 25/248 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L + + ++ + F + + GFD Sbjct: 1 MKKWIIAA--ALATLTINAQAAE-----------KIRFAASATYPPFETLDRENNLVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S + F Sbjct: 48 IDLAKALCQQM---KAECTFTNNAFDSLIPSLKFRRYDAVISGMDITAER--SKQVDFTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K SS S L I V+ GTT + L D + ++ + Sbjct: 103 PYYANSAIVIAQKG-KFSSFSDLKDKRIGVENGTTHQKFLQDKHPE----VKVVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + TN + + + L A+ +G+T Sbjct: 158 NAILDMKNGRLDGVFGDSAVVNQWLKTNPDLATVGEHVTDADYFGTGLGIAVRKGNTALR 217 Query: 239 NIVSWTHY 246 + + Sbjct: 218 DQFNQALT 225 >gi|237799095|ref|ZP_04587556.1| arginine/ornithine ABC transporter periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021949|gb|EGI02006.1| arginine/ornithine ABC transporter periplasmic arginine/ornithine-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 258 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 81/246 (32%), Gaps = 25/246 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L +L F+ LK GI FA +G GFD Sbjct: 1 MKKLMLIGAMALSVLAQPIFADEKP----------LKIGIEAAYPPFASKAPDGSIVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D AL + K ++ AL+ ++ID + + T R+ + F Sbjct: 51 YDIGNALCEEM---KVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKK--SVDFTG 105 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +M + + S+++L G I VQ G+ E + + P + Sbjct: 106 KYYNSPARLVMKEGTKVSDSLAELKGKKIGVQRGSIHERFAREVLAPAGVIVTP--YGSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQG 233 EI A R D D + L L D + P + A+ +G Sbjct: 164 NEIYLDIGAGRLDGTIADATLLQDGFLKTDSGKGYAFTG-PSFTDPKYFGDGIGIAVRKG 222 Query: 234 DTEWYN 239 D + Sbjct: 223 DKANLD 228 >gi|225569794|ref|ZP_03778819.1| hypothetical protein CLOHYLEM_05888 [Clostridium hylemonae DSM 15053] gi|225161264|gb|EEG73883.1| hypothetical protein CLOHYLEM_05888 [Clostridium hylemonae DSM 15053] Length = 274 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 35/252 (13%), Positives = 76/252 (30%), Gaps = 30/252 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59 M ++LC ++ + +K G L+ G+ ++ F + G + G Sbjct: 10 MKMRRLSALLCGLLTLAAVLTGCGGR----EKSGTLRVGVRDDIMNFGYLNKETGRYYGM 65 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D L+ + + ++++ + R LQ ++D L R+ F Sbjct: 66 EIDLANKLAEKLGYEE--VEFVTVQPDNRKEMLQEGKVDCLVAAYSIADTRKE--NFDFS 121 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH------- 172 P Y D + K S L ++ + +G+ LA + Sbjct: 122 PPYYTDETVIMAEKSALFHSADDLKDQTVGIVSGSNAGPLLAQKLYDLGIITDKVVSNTD 181 Query: 173 ---------PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + + ++D A DA D L ++++ Sbjct: 182 TATVYEGAGVVKTAKYSDLDTALETGAVDAVCMDKCIAGTYMN-----ENREFLDVVVAE 236 Query: 224 SPLAPAIIQGDT 235 A + Sbjct: 237 QQYGVATRKDSD 248 >gi|291518711|emb|CBK73932.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Butyrivibrio fibrisolvens 16/4] Length = 278 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 94/268 (35%), Gaps = 32/268 (11%) Query: 1 MYKDFFVSILCLIIL--FFTSFSTNA------------------SILGDIKKRGFLKCGI 40 M + +L ++ F + ++A S L I+++G L GI Sbjct: 1 MMRKIIALLLSATMMTAAFVACGSSAAQPASDTASTEAPSADSESDLAYIQQKGTLIVGI 60 Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 T NG+W GFD D + ++ + + ++++ ++ + L LQ+K ID++ Sbjct: 61 -TDFAPMDYKDDNGEWIGFDADLAKKVAENLGVE---VEFVEIDWDNKILELQNKSIDVV 116 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL 160 T S+ + + K I + + S V++G+ E Sbjct: 117 WNGMTLTPEVTSSMECSKAYLNNAQVVVVAADKADSIKTSEDAAALSFAVESGSAGEAAA 176 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 + Y+ + + + A DA D+ A+ + ++ Sbjct: 177 EE------NSYNYVAVKSQADAVMEVAAGTSDACIIDLLMAGAMIGEGTSYPDLEHTIEL 230 Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 ++ +G ++ N ++ A+ Sbjct: 231 TTEE-YGIGCRKG-SDLANYINEQLKAL 256 >gi|255281308|ref|ZP_05345863.1| amino acid ABC transporter, amino acid-binding protein [Bryantella formatexigens DSM 14469] gi|255268265|gb|EET61470.1| amino acid ABC transporter, amino acid-binding protein [Bryantella formatexigens DSM 14469] Length = 299 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 35/308 (11%), Positives = 88/308 (28%), Gaps = 46/308 (14%) Query: 1 MYKDFFVS-----ILCLIILFFTSFSTNASI----------------------------- 26 M K + IL +L + Sbjct: 1 MKKRNLAAAAMSGILAAAMLAGIPVYAEGTTEAAGETEITTEAAEAAEETEAEGTGEGGL 60 Query: 27 LGDIKKRGFLKCGINTGLVGFAEVK---ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L IK++G L G +G + + AN D G D++ +A++ + + ++ + Sbjct: 61 LESIKEKGKLVVGTASGYPPYEFIDITSANQDIVGIDMELAQAIADKLGVE---LEIQDM 117 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 N ++ + ++D+ T R+ ++ + + + ++ Sbjct: 118 NFTSLISSIPTHKVDMAIAGISITEERKETMDFSEPYLEAEQKMLILSENADKYKTLEDF 177 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 SG ++ + TT E + + E+V + + + + Sbjct: 178 SGETVAAEKSTTQETVCQELL----TDSPLVSLEKVPDCLMELQNGKVAGVMVENIVGEQ 233 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263 + D + A A+ +G+ + IV+ + ++ Sbjct: 234 YVIAYDN--IVFSDAETGKLKTSAVAMDKGNEDLMEIVNEVIKENQENGNFDKWVEEYSE 291 Query: 264 VSKDTTNP 271 + Sbjct: 292 KAASNAQQ 299 >gi|88601351|ref|YP_501529.1| extracellular solute-binding protein [Methanospirillum hungatei JF-1] gi|88186813|gb|ABD39810.1| amino acid ABC transporter substrate-binding protein, PAAT family [Methanospirillum hungatei JF-1] Length = 276 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 39/265 (14%), Positives = 93/265 (35%), Gaps = 29/265 (10%) Query: 1 MYKD---FFVSILCLIILFFTSFSTNASI----------LGDIKKRGF----LKCGINTG 43 M + I +++LF + +T ++ + + GI+ Sbjct: 2 MKRKGLVLVSLIGLVLLLFMSGCTTTEQTAPSSEVHVQPTEEVSQAKESVPLYRVGIDAA 61 Query: 44 LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F+ V +G GFDVD + ++ + +++LP+ AL + +ID++ Sbjct: 62 YQPFSMVGPDGKATGFDVDSMKWIAKDQGFE---VEFLPIAWDGIIPALLAGKIDLVYAG 118 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLAD 162 T R+ + F + Q ++ + I+ + I Q G T + + + Sbjct: 119 MTITEERKE--KVNFSKPYWTVNQMVVVKEGSPITLEQVKNGSVVIGTQRGCTAAIWIDE 176 Query: 163 Y--FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 ++ + +++ + R DA D + + + +P + + + Sbjct: 177 NLVNQSLMPAQNLKLYDNTPLAVDDLVSGRIDAVMYDSTVMNDIIA--GKPVAKIGMVET 234 Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTH 245 A+ + DTE ++ Sbjct: 235 N--EDFGIAVRKEDTELLEKLNSGL 257 >gi|295397425|ref|ZP_06807512.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Aerococcus viridans ATCC 11563] gi|294974326|gb|EFG50066.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Aerococcus viridans ATCC 11563] Length = 727 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 76/258 (29%), Gaps = 12/258 (4%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKG 58 M S+ + +L + G +T F V +G++ G Sbjct: 1 MKHIKLSFSVFIVSLLTLLFSIAPGKVEATETGNGETYIIATDTTFAPFEFVDDSGEFVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 DVD A++ D L A+++ Q D + T R+ F Sbjct: 61 IDVDILAAIAEDQGFDYE---LRSLGFDAAVQAVETGQADAVIAGMSITEERK--QTFDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G F + + S+ L G S+ V+ GT AD + + F+ Sbjct: 116 SEPYYESGTAFAVLEDSEYQSLEDLEGQSVAVKTGTQGATIAADLADQYGFTVN--TFDD 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI-IQGDTEW 237 + + A D + + D ++P A+ + E Sbjct: 174 SPNMYQDVISGNSAAAVEDYPVM--GYAIESGGLNLRFIGDNFEEAPYGFAVLRGQNAEL 231 Query: 238 YNIVSWTHYAMVTAEELG 255 + + + + E Sbjct: 232 LEMFNAGLENIKASGEYD 249 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 81/266 (30%), Gaps = 29/266 (10%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 +T F V NGD+ G DV+ A+++ + + PL A+++ Sbjct: 276 TYTIATDTTFAPFEFVDENGDFTGIDVELLDAIAA---NQGFNYELKPLGFDAAVQAVET 332 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 +Q D + T R+ F + G F + I S L G ++ V+ GT Sbjct: 333 QQADAVIAGMSITEERK--QTFDFSEPYFDSGTTFAVLADSDIESYEDLEGQNVAVKTGT 390 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + F+ + + A D + N Sbjct: 391 QGATIAQSMADEYGF--TVTTFDDSSNMYQDVISGNSAAAVEDYPVMA--YAINSGGLNL 446 Query: 215 VILPDIISKSPLAPAI-IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 ++ D + A+ + E + + A+ + E + V Sbjct: 447 KVIGDQLEPVSYGFAVLAGENQELLQMFNDGLAAIQESGEY---------------DEIV 491 Query: 274 QRFLGIDKSSNIGEALG----LTKDW 295 ++LG + + G L ++ Sbjct: 492 GKYLGDSEEGETSSSNGFLTQLANNF 517 >gi|288916725|ref|ZP_06411099.1| extracellular solute-binding protein family 3 [Frankia sp. EUN1f] gi|288351799|gb|EFC86002.1| extracellular solute-binding protein family 3 [Frankia sp. EUN1f] Length = 375 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 95/260 (36%), Gaps = 23/260 (8%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSK--IQY 80 SI+ DI ++G L I T + +GFDVD A+++A+F + + I++ Sbjct: 92 GSIMDDIWRKGDLTVAIVTDAPPAGSMNWTEPTLEGFDVDIAGAIATALFGNGGESKIRF 151 Query: 81 LPLNAKERFLALQS--KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + K+R L++ +DI+ T R+ + F + + ++ K G Sbjct: 152 RAVTTKDRAALLKNPNSGVDIVVATYTITCERKEKENILFSGVYFESRFALLVPAKAGFK 211 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAH----NMKYHPIVFERVEEIDAAYRAHRCDAY 194 ++ +G +IC G T+ L D ++ + + R + A + D Sbjct: 212 TLRDFAGYTICSTEGATSVQKLEDAARSALAPGDPPLTITLRPRAADCLVAVQQGEADGV 271 Query: 195 TGDISALYALKLTNDR---PSEHVILPDIISKSPLAPAIIQ-----------GDTEWYNI 240 D L +K + P V P A+ + D E+ Sbjct: 272 ATDDIILAGMKARDQYVDVPPGGVTAAGDDLAEPYGVALHRSHLDDPNANKLRDEEFVQF 331 Query: 241 VSWTHYAMVTAEELGITQKN 260 V+ M+ + + +N Sbjct: 332 VNGVLRDMMASGGWATSYQN 351 >gi|254254899|ref|ZP_04948216.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] gi|124899544|gb|EAY71387.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] Length = 264 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 87/250 (34%), Gaps = 20/250 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++I+ L I ++++ + + ++ G T F + +G GFD Sbjct: 6 MRKPHLLAIVLLAISTTSAYAGDWTT---------VRFGTATSYPPFHSERPDGSLTGFD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + ++ ++ + ALQ+++ D + T R + + Sbjct: 57 IDLGNEICRRM---HARCVWVESDFDSIIPALQARKFDGIVSALSITPQRARQIAFS-SK 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + + + + L G I V G+T E Y++ + +E E Sbjct: 113 LYDIPARLVARKGAGLLPTPASLKGKRIGVVQGSTQERYAQTYWEPDG--AIVVSYEDQE 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + A R DA + + L +++ ++ + A + + DT Sbjct: 171 LVYADLVDGRLDATLTNAAQAEYGFLDTPEGADYAFAGQPLTDPTIFGVGTAVGLRKQDT 230 Query: 236 EWYNIVSWTH 245 + + Sbjct: 231 DLEARIDRAI 240 >gi|289664060|ref|ZP_06485641.1| putative carboxycyclohexadienyl dehydratase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 257 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 34/254 (13%), Positives = 81/254 (31%), Gaps = 10/254 (3%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + + + ++ + AS L + + G L+ ++ ++ +G ++G D+D Sbjct: 2 RYRICLALVLSCGMAHAAAPASRLDVVLQSGVLRVCTTGDYRPYSLLREDGQFEGSDIDL 61 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 ++L++++ ++++++ + + L +++ DI TL R+ + Sbjct: 62 AQSLATSLG---ARVRFVRTSWPQLMPDLLAERCDIAVGGISVTLQRQRQASFSAVLDVD 118 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIVFERVEE 181 + S+ QL+ + V T E N +F Sbjct: 119 GKIPLVRCADQARYRSMEQLNRPQVRVIEPPGGTNEAFARRELPRAN----VRLFADNTT 174 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 I R D D S + + A + + D W V Sbjct: 175 IFEELLEQRADVMITDASEALYQQARLPGLCAIAPEHPLQYSE-KAFLLPRDDQAWKAYV 233 Query: 242 SWTHYAMVTAEELG 255 + + E Sbjct: 234 DQWLHLSKASGEYR 247 >gi|78065413|ref|YP_368182.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77966158|gb|ABB07538.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 259 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 77/220 (35%), Gaps = 13/220 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ GI F G +GFDVD A+ + + K ++ + ALQ+ Sbjct: 26 TLRFGIEAAYPPFESKTPAGQLQGFDVDIGNAVCAKL---NMKCVWVENSFDGLIPALQA 82 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153 ++ D ++ + T R + F P Y I + V+ L G + V G Sbjct: 83 RKFDAINSAMNITSKR--RQSIDFTPAIYVVPIVMIAKHGSPLRPDVASLRGKHVGVLQG 140 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 ++ E L ++ + + ++ ++I A A R DA + L + Sbjct: 141 SSQEDFLKAHWATAGVA--VVSYQDQDQIYADLVAGRLDAAVQEAQTAQDGFLDKPAGRD 198 Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248 + I+ + + + + D + A+ Sbjct: 199 YQIVGEPLKDPATLGEGTGFGMRKNDKALQAKIVGALDAL 238 >gi|167567071|ref|ZP_02359987.1| glutamine ABC transporter periplasmic protein [Burkholderia oklahomensis EO147] gi|167574148|ref|ZP_02367022.1| glutamine ABC transporter periplasmic protein [Burkholderia oklahomensis C6786] Length = 250 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 94/283 (33%), Gaps = 39/283 (13%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + F +++ + ++ + S A L G +T + F + + + GFD+ Sbjct: 3 RRSFIKTVVAVALVGASLASAQA---------KELVVGTDTSFMPFEFKQGD-KYVGFDL 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D ++ + P++ ALQ++ ID+ R+ + F Sbjct: 53 DLWAEIAKDAGW---TYKIQPMDFAGLIPALQTQNIDVALSGMTIKEERKK--AIDFSDP 107 Query: 122 TYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + I S+ L+G I + GT T D+ KAH F ++ Sbjct: 108 YYDSGLAAMVQTNNATIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A R DA + + N+ + +S +G Sbjct: 164 QAYLALEAGRVDA-AMHDTPNVLFFVNNEGKGRVKVAGTPVSGDKYGIGFPKGSP----- 217 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKS 282 A V AE + ++ D + +++ G + Sbjct: 218 ----LVAKVNAE--------LAKMKADGRYAKIYKKWFGSEPP 248 >gi|93005157|ref|YP_579594.1| extracellular solute-binding protein [Psychrobacter cryohalolentis K5] gi|92392835|gb|ABE74110.1| extracellular solute-binding protein, family 3 [Psychrobacter cryohalolentis K5] Length = 310 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 79/285 (27%), Gaps = 25/285 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL----GDIKKRGF---LKCGINTGLVGFAEVKAN 53 M K + + N+S +K + F+ A+ Sbjct: 9 MTKKALWLAPLSAAMLMLAGCNNSSTPTESTETAAATDTPLNIKIATESSYKPFSYTDAD 68 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G G++++ AL + + I + L +++ D T R+ Sbjct: 69 GKLIGYEIELVDALCAQMKAKCEVIS---QDWDGLIPGLNAQKFDAAIAGMSITPERKEV 125 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + G I K + SV L G I Q T L D + Sbjct: 126 --VEFSEPYFHSGIILIGKKGDDV-SVDALKGQPIASQRSTVASQYLQD----KHADADI 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQ 232 +++ + + R A D T V +I + + A + Sbjct: 179 KLYDTQDNAYLDLTSGRVRAMMSDKVTGIDWLKTEAGKDYEVKGQEISTNDDAMGIAFRK 238 Query: 233 GDTEWYNIVSWT-------HYAMVTAEELGITQKNINQVSKDTTN 270 GD Y +T G + Q + T++ Sbjct: 239 GDPLVAKFNKALAELKDNGTYDQITGSYFGTSSTTAAQKAVATSD 283 >gi|323353242|ref|ZP_08087775.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis VMC66] gi|322121188|gb|EFX92951.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis VMC66] Length = 287 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 9/246 (3%) Query: 2 YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K + S+ + +L + +S ++ ++ G F+ +G G+D Sbjct: 16 KKTLKYFSLAAVSVLAIGALVACSSSSNKKTEKIKVEVGTVGTTKPFSYEDKDGKLTGYD 75 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ RA+ D ++ + F L S + I + N E + + Sbjct: 76 IEVLRAIFKD--SDKYEVNFNKTKWASIFSGLDSDRYQIGANNIS--YSEERANKYLYAS 131 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-- 178 + ++ K +GI S+ + G S V GT+T L DY K H+ I + Sbjct: 132 PYAKNPTVLVVRKGEGIKSLDDIGGKSTEVVQGTSTAQQLEDYNKEHSDNPTKINYTDGT 191 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237 +++I A R D + + + ++ + P I G + Sbjct: 192 IQQILANLNDGRTDYKVFER-ITVESIIKDQGLKNLEVIELPSDQQPYVYPIIASGQEDL 250 Query: 238 YNIVSW 243 V+ Sbjct: 251 QKFVNK 256 >gi|108800000|ref|YP_640197.1| extracellular solute-binding protein [Mycobacterium sp. MCS] gi|119869125|ref|YP_939077.1| extracellular solute-binding protein [Mycobacterium sp. KMS] gi|108770419|gb|ABG09141.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. MCS] gi|119695214|gb|ABL92287.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. KMS] Length = 311 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 43/243 (17%), Positives = 76/243 (31%), Gaps = 16/243 (6%) Query: 24 ASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A+ L IK RG L G+N +G GFDVD A++S + Y Sbjct: 61 ANTLPQPIKDRGSLIVGVNVPYAPNEFKDPSGKIVGFDVDLMNAIASTLGVTAE---YRE 117 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + ++ ++Q D+ + T RE + F + G + GI + Sbjct: 118 SDFEKIIPSIQGGTYDVGMSSFTDTKEREA--SVDFV-TYFSAGIQWAQKAGAGI-DPAN 173 Query: 143 LSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 G + VQ+ T E A + F+ + + A + DA + D Sbjct: 174 ACGKRVAVQSTTIEETEELPAKSKACTDAGKPAIEIVKFDEQDAVANAVVLGQADAMSAD 233 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + +I +P + +G + ++ Sbjct: 234 SPVTA--YAVKQSNGKLETAGEIFDAAPYGWPVAKGSP-LGQSLQQALEHLIETGAYEQI 290 Query: 258 QKN 260 KN Sbjct: 291 AKN 293 >gi|330812666|ref|YP_004357128.1| putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380774|gb|AEA72124.1| putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 285 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 36/242 (14%), Positives = 73/242 (30%), Gaps = 24/242 (9%) Query: 18 TSFSTNASILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 +S + + L ++++ L G+ F+ + GFDVD +A++ + Sbjct: 29 SSQAFAGATLDRVEQKKEL-VGVLMESYPPFSFLNDQNQLDGFDVDVAKAVAQKLGVK-- 85 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKK 135 ++ + S + DI + + R F Y + K Sbjct: 86 -LRLETPSWDVIAAGHWSGRYDICICSMTPSKARAEV--FDFPVQYYASPAVIVVNAKDD 142 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHN----------MKYHPIVFERVEEIDAA 185 I LSG + + + ++ E L ++ Sbjct: 143 RIHGAKDLSGKKVGLTSASSYESYLNKNLVIEGAEDTQLSYPFEDVQIAPYDTDNVAFQD 202 Query: 186 YRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R DA + L + + +++ P + AI +GD +W N V Sbjct: 203 LGLGAGVRLDAVLTN---LVTAQPRLTEDKRFKLAGEVLYSEPNSVAIEKGDAQWDNKVR 259 Query: 243 WT 244 Sbjct: 260 EV 261 >gi|271500963|ref|YP_003333988.1| cationic amino acid ABC transporter periplasmic-binding protein [Dickeya dadantii Ech586] gi|270344518|gb|ACZ77283.1| cationic amino acid ABC transporter, periplasmic binding protein [Dickeya dadantii Ech586] Length = 248 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 74/212 (34%), Gaps = 12/212 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L +T V F + + + GFD+D A++ + P++ ALQ++ Sbjct: 27 LIVATDTAFVPFEFKQGD-KYVGFDIDLWDAIAKQL---NLTYTLKPMDFSGIIPALQTR 82 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGT 154 +D+ T R+ + F Y G ++ + I L+G + V++GT Sbjct: 83 NVDLALAGITITEERK--HAIDFSDGYYNSGLLVMVRADNQDIKGEQDLAGKVVAVKSGT 140 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + DY KA+ F ++ +R DA D + T Sbjct: 141 GSV----DYAKANIKTKELRQFPNIDNAYLELGTNRADAVLHDTPNILYFIKTAGNGK-F 195 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + D I A +G + N V+ Sbjct: 196 KAVGDSIKAQQYGVAFPKGSDDLRNKVNAALK 227 >gi|167625394|ref|YP_001675688.1| extracellular solute-binding protein [Shewanella halifaxensis HAW-EB4] gi|167355416|gb|ABZ78029.1| extracellular solute-binding protein family 3 [Shewanella halifaxensis HAW-EB4] Length = 245 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 80/249 (32%), Gaps = 26/249 (10%) Query: 1 MYKDFFV--SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANG-DW 56 M K V S+ L T K L G N F V A+G + Sbjct: 1 MKKSVLVLASLGLTGALMLTGCG---------KSDDVLVVGTNASFPPFEYVGGASGDEI 51 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD+D R ++ ++ +N +AL + ++D ++ T R+ S+ Sbjct: 52 MGFDIDLARQIAKDAGK---TLKVENMNFDSLIVALNAGKVDFIASGMTITPERQASVNF 108 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + P + I+S+ L I VQ G+T + A + F Sbjct: 109 S-EPYYEATQMVLVNKDNNSINSLDDLKDKHIAVQLGSTGD------IMAKSYSQQVTAF 161 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E + + D D ++ + ++ S A+ + E Sbjct: 162 NSGFEAVMELKNAKVDLVLFD---SEPAISFLEKNPQLKMVELDFSPEFYGFAVAKDKVE 218 Query: 237 WYNIVSWTH 245 N ++ + Sbjct: 219 LLNSINTSL 227 >gi|227812326|ref|YP_002812336.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio cholerae M66-2] gi|298499555|ref|ZP_07009361.1| arginine-binding periplasmic protein 1 [Vibrio cholerae MAK 757] gi|227011468|gb|ACP07679.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio cholerae M66-2] gi|297541536|gb|EFH77587.1| arginine-binding periplasmic protein 1 [Vibrio cholerae MAK 757] Length = 243 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 82/260 (31%), Gaps = 31/260 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L+ + +K + F + N +GFD Sbjct: 1 MKKILLAYLIGLVSASAAAQQ-------------EIKFVMEATYAPFEYMDENNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + +K + AL+ K+ D D T R + F Sbjct: 48 VDLANALCKQL---EAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEAR--LEQVNFSN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ ++ + L G + VQ G+T + L + + + + Sbjct: 103 PYYDNSAAFVSLAG-KVADQAALKGKRVGVQNGSTHQSFLLEQL----SDVVAVPYSSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + + R D+ GD + + + + + ++ + A+ + + Sbjct: 158 DAFIDMKNGRIDSVFGDTAVVAEW---FKGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQ 214 Query: 236 EWYNIVSWTHYAMVTAEELG 255 + ++ A+ E Sbjct: 215 ALLDQLNAALEAVKENGEYA 234 >gi|255327587|ref|ZP_05368653.1| L-cystine-binding protein TcyA [Rothia mucilaginosa ATCC 25296] gi|255295261|gb|EET74612.1| L-cystine-binding protein TcyA [Rothia mucilaginosa ATCC 25296] Length = 272 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 33/241 (13%), Positives = 79/241 (32%), Gaps = 11/241 (4%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++L +S +++ + L IK G ++ G+ F+ +NG GF+ + Sbjct: 19 LAALLAACGSSSSSTASSTNKLEAIKSAGKIRVGLEGTYRPFSFHDSNGALVGFEKEIID 78 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + + + + + DI+ N T R F + Sbjct: 79 LVAKDLGVTAE---FTETPWDSLIAGVDADRYDIVINNVSATDER--KQKYDFSVPYLYS 133 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 + K + +VS++SG S + +A +V +E Sbjct: 134 EPKVAVKKDSSLQNVSEISGHSSAQSETS----NFRKMVEAKGAS--IVVVSGFDEAIEQ 187 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + R + D + + + ++ D+ + S + + +G N + + Sbjct: 188 VLSGRAEMTANDSVSFAEYFKEHPDANLRLLSGDLGTGSNSSILLPKGQDALRNAIDESL 247 Query: 246 Y 246 Sbjct: 248 K 248 >gi|205375464|ref|ZP_03228252.1| amino acid ABC transporter ATP-binding protein [Bacillus coahuilensis m4-4] Length = 259 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 35/247 (14%), Positives = 81/247 (32%), Gaps = 17/247 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++IL I++ + + S + + + F+ G G Sbjct: 1 MKKKVMLTILLAIMMSLAACGSQETNSTGMKLVEEERFTYAASGEFAPFSVTNGEGQMTG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD++ A++ + +P + +Y +++ + D + R + F Sbjct: 61 FDIEVAEAVADVLGLNPVQEKYK---FSGIVEGVKAGKFDAAVASHTINEER--LEQVDF 115 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y+ G + + ++ L G I V G+T E + A + + ++ Sbjct: 116 STPYYYSGPQIFVRPDSDVQTLEDLEGLEIAVSKGSTYEES------AVTVTENIKRYDS 169 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 A + DA D + +++ +S A A+ + + E Sbjct: 170 DVVALEALSKGKHDAVITDFITGKEAIAN----GLTIEARELLGRSEQAIAVSKENKELL 225 Query: 239 NIVSWTH 245 ++ Sbjct: 226 EKINEAL 232 >gi|126444587|ref|YP_001064263.1| glutamine ABC transporter periplasmic protein [Burkholderia pseudomallei 668] gi|126224078|gb|ABN87583.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 668] Length = 250 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 93/283 (32%), Gaps = 39/283 (13%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + F +I+ L ++ + +A L G +T + F + + + GFD+ Sbjct: 3 RRSFIKTIVALALVGASVAGAHA---------KELVVGTDTSFMPFEFKQGD-KYVGFDL 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D ++ + P++ ALQ++ ID+ R + F Sbjct: 53 DLWAEIAK---GAGWTYKIQPMDFAGLIPALQTQNIDVALSGMTIKEERRK--AIDFSDP 107 Query: 122 TYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + I S+ L+G I + GT T D+ KAH F ++ Sbjct: 108 YYDSGLAAMVQANNTTIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A R DA + + N+ + +S +G Sbjct: 164 QAYLALEAGRVDA-AMHDTPNVLFFVNNEGKGRVKVAGAPVSGDKYGIGFPKGSP----- 217 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKS 282 A V AE + ++ D + +++ G + Sbjct: 218 ----LVAKVNAE--------LARMKADGRYAKIYKKWFGSEPP 248 >gi|307545356|ref|YP_003897835.1| ABC transporter periplasmic protein [Halomonas elongata DSM 2581] gi|307217380|emb|CBV42650.1| ABC-type transport system periplasmic substrate-binding protein [Halomonas elongata DSM 2581] Length = 262 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 83/251 (33%), Gaps = 19/251 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGF 59 M + +I I + L+ GI+ F + G+W GF Sbjct: 7 MQRALIPAIALSIATLGGAAQAAEP----------LQIGISAEPYPPFTYTSSEGEWTGF 56 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +V+ A+ A+ ++ + P +L++ +ID++ + T R+ + F Sbjct: 57 EVELGLAICEAM---EAECEIQPTGWSGIIPSLKAGRIDMIMNSMSITEARQKV--IDFS 111 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 YF ++ +S L G + VQ+ TT + + +++ Sbjct: 112 DPYYFTPGAYVAADDLELSLPEGLDGLVLGVQSATTNATYARRALRDTGVDTRL--YDQA 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 E+++ + R D D A+ L D I + G + + Sbjct: 170 EQVNRDLLSGRLDVILADEIAMNELVER-DEAEGFEIKGTAPHHEAYGEGVGIGIRQGDS 228 Query: 240 IVSWTHYAMVT 250 + A + Sbjct: 229 ELKANLNAAIE 239 >gi|296328660|ref|ZP_06871177.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154259|gb|EFG95060.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 242 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 85/256 (33%), Gaps = 23/256 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++ L+ + + K + G N F + GFD Sbjct: 1 MKKFVKLMLMSLLSVVISISVFA--------KSNVVYVGTNAEFAPFEYLD-KNKIVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+S + + + ALQ+K++D++ T R+ ++ F Sbjct: 52 IDLLDAISKETG---LEFRIQDMAFDGLLPALQTKKVDMVIAGMTATPERQKTVA--FSK 106 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q I + K + S LSG + V G T + +++ F Sbjct: 107 PYFKAKQVVITKGENKSLKSFKDLSGKKVGVMLGFTGDAVVSEI-----KGVKIERFNAA 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A ++ DA D A K T + + VI + A A + D E N Sbjct: 162 YAAILALSQNKIDAVVLDSE--PAKKYTANN-KQFVIANIPAEEEDYAIAFRKNDKELIN 218 Query: 240 IVSWTHYAMVTAEELG 255 V+ + E Sbjct: 219 KVNVALDKIKANGEYD 234 >gi|25028401|ref|NP_738455.1| glutamate-binding protein GluB [Corynebacterium efficiens YS-314] gi|24636878|sp|Q8RQL6|GLUB_COREF RecName: Full=Glutamate-binding protein; Flags: Precursor gi|20126698|dbj|BAB88899.1| gluB [Corynebacterium efficiens] gi|23493686|dbj|BAC18655.1| glutamate-binding protein GluB [Corynebacterium efficiens YS-314] Length = 294 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 37/242 (15%), Positives = 74/242 (30%), Gaps = 15/242 (6%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA----LS 68 I L S L + G + G G + G DVD + ++ Sbjct: 22 ITLTACGDSEGGDGLLAAIENGNVTIGTKYDQPGLGLRNPDNSMSGLDVDVAQYVVNSIA 81 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 D +++ + +R +Q+ ++D+++ R S + F Q Sbjct: 82 DDNGWDHPTVEWRETPSAQRETLIQNGEVDMIAATYSINPGR--SESVNFGGPYLLTHQA 139 Query: 129 FIMH-KKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++ I ++ L G +C G+T + D ++ A Sbjct: 140 LLVREDDDRIQTLEDLDDGLILCSVTGSTPAQKVKDVLP----GVQLQEYDTYSSCVEAL 195 Query: 187 RAHRCDAYTGDISALYALKLTNDRP---SEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 DA T D + L+ + E + + I + DTE + ++ Sbjct: 196 SQGNVDAMTTDATILFGYAQQREGEFRVVEMEQDGEPFTNEYYGIGITKDDTEATDAINA 255 Query: 244 TH 245 Sbjct: 256 AL 257 >gi|149191457|ref|ZP_01869707.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio shilonii AK1] gi|148834726|gb|EDL51713.1| arginine ABC transporter, periplasmic arginine-binding protein [Vibrio shilonii AK1] Length = 243 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 83/260 (31%), Gaps = 31/260 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S++ L + +K + F V N +GFD Sbjct: 1 MKKMLLASLIGLASYGAMAQQ-------------EIKFAMEATYAPFEYVDENNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL I +K + AL+ K+ D D T R ++F Sbjct: 48 VDLANALCKQI---EAKCSFHNQAFDSLIPALKFKRYDAAISGIDITEAR--QQQVSFTN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ ++S + L G + VQ G+T + L + + + + Sbjct: 103 AYYDNSAAFVAMTG-KVASQAALEGKRVGVQNGSTHQSYLLEQMP----GVTAVPYGSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + + R D+ GD + + + + + D I+ A+ + + Sbjct: 158 DAFIDMQNGRIDSVFGDTAVVAEW---FKKDDKLAYVGDQITNQKYFGNGFGIAVNKDNQ 214 Query: 236 EWYNIVSWTHYAMVTAEELG 255 + ++ + E Sbjct: 215 ALVDQLNTALKTVKENGEYQ 234 >gi|307130610|ref|YP_003882626.1| glutamine ABC transporter periplasmic binding protein [Dickeya dadantii 3937] gi|306528139|gb|ADM98069.1| glutamine transporter subunit; periplasmic binding component of ABC superfamily [Dickeya dadantii 3937] Length = 248 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 75/212 (35%), Gaps = 12/212 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L +T V F + + + GFD+D A++ + + P++ ALQ++ Sbjct: 27 LLVATDTAFVPFEFKQGD-KYVGFDIDLWDAIAKQLNLNY---TLKPMDFSGIIPALQTR 82 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGT 154 +D+ T R+ + F Y G ++ + I L+G + V++GT Sbjct: 83 NVDLALAGITITEERKR--AIDFSDGYYNSGLLVMVRADNQDIKGEQDLAGKVVAVKSGT 140 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + DY KA+ F ++ +R DA D + T Sbjct: 141 GSV----DYAKANIKTKELRQFPNIDNAYLELGTNRADAVLHDTPNILYFIKTAGNGK-F 195 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + I A +G E N V+ Sbjct: 196 KTVGESIKAQQYGVAFPKGSDELRNKVNGALK 227 >gi|172064456|ref|YP_001812107.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171996973|gb|ACB67891.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 267 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 86/254 (33%), Gaps = 22/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + L SF+ + + ++ GI+ F + +G GFD Sbjct: 1 MNRTAKLVVSALAFAPLVSFAQDTAT---------IRWGIDPTYPPFEAKQPDGSLAGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +K ++ AL++++ D++ T R + F Sbjct: 52 IDLRDAICEQL---RAKCVWVEQGFDGMIPALRARKFDVIMSAMTATDER--LKQIDFSN 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + + + + L+G + + GTT E + + ++ Sbjct: 107 KLYASPGALVAPAGSKLLPTAASLAGKRVGIDQGTTQEAYAKAEWATKG--VTIVSYQNQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +++ R DA D + L R + ++ + A + +GD Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTPRGKGYAFAGPDVTDVRITGYGVAMGVRKGD 224 Query: 235 TEWYNIVSWTHYAM 248 + ++ A+ Sbjct: 225 ADMKKRLNDAIAAI 238 >gi|319942011|ref|ZP_08016330.1| hypothetical protein HMPREF9464_01549 [Sutterella wadsworthensis 3_1_45B] gi|319804395|gb|EFW01273.1| hypothetical protein HMPREF9464_01549 [Sutterella wadsworthensis 3_1_45B] Length = 276 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 64/220 (29%), Gaps = 13/220 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L DIK RG L G + G G+DV+ RA++ + + +++ Sbjct: 45 LDDIKARGVLTIGTEGVYAPYTYHDEKGRLTGYDVEVGRAIAKKLGVEA---KFVETPWD 101 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSG 145 + +K+ DI L E F ++ I L G Sbjct: 102 ALIAGIDAKRYDIGINQIG--LSPERLAKYDFTKPYVSIKGVLLVRSDNEKIKGFEDLKG 159 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + Q T+ +A A + + + R DA A + Sbjct: 160 VRMA-QTITSNWGKIAVNAGA-----EIVGVQDFAQSVQLIAQRRADAVVNSELAWVDYR 213 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 V+ +A + +G+ + ++ Sbjct: 214 KAQPNVPVKVVATTKEGID-VAIPVRKGNPKLLAALNQAL 252 >gi|167589672|ref|ZP_02382060.1| extracellular solute-binding protein, family 3 [Burkholderia ubonensis Bu] Length = 246 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 74/219 (33%), Gaps = 11/219 (5%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L I K G L+ + F V + +G+D+D L+ A+ ++ +P+N+ Sbjct: 14 LDTIAKNGALRVAVPEDYPPFGSVGTDMQPQGYDIDMAGVLAKALGVK---LKLVPVNSA 70 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 R L + ++D++ + T RE + F QG +S+ L+G Sbjct: 71 NRIPYLTTNKVDMVISSLGKTPEREKV--IDFSTAYAPYFQGVFGPADVKVSAPDDLTGK 128 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 ++ G E+ L+ F+ A+ + + A+ Sbjct: 129 TVGATRGALEEIALSQLAP----NATIKRFDDNNATIQAFLSGQVQLIAAGNIVAAAILA 184 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 P + +I SP + + + + Sbjct: 185 --KNPPRRPEVKFVIKNSPCFVGVNKNEPRLLAKIDDAI 221 >gi|118431638|ref|NP_148244.2| ABC transporter, substrate binding protein [Aeropyrum pernix K1] gi|116062962|dbj|BAA80898.2| ABC transporter, substrate binding protein [Aeropyrum pernix K1] Length = 283 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 88/240 (36%), Gaps = 15/240 (6%) Query: 20 FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 S +L +IK+RG LK G + + + G + G D++ + ++ + +++ Sbjct: 41 CSVGYGLLDNIKERGVLKVGTSADWPPYEYIDPQGGYAGIDIELAKKIADGLG---VQLE 97 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK---KKG 136 + + F A+QS ++DI+ + R + F + I+ K G Sbjct: 98 IVDMKFAALFQAVQSGKVDIVIADVAMKPER--LEAVDFTIPYRCETGKAIIVKAEDASG 155 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-VEEIDAAYRAHRCDAYT 195 + L+G I VQ+ T E YF K + ++R E+ A + + DA Sbjct: 156 YTGFDWLAGKKIGVQSATVEEELANKYF---GDKAEIVTYDRVYPEMTIALKTGKIDAMV 212 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + +P + + E VS + ++ + EL Sbjct: 213 AAPDVARLIVTAEEGLVIVDQIPYFGCST---VVVPHCAFELKKEVSSIIWDLIQSGELQ 269 >gi|57167746|ref|ZP_00366886.1| histidine-binding protein precursor [Campylobacter coli RM2228] gi|305433251|ref|ZP_07402407.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter coli JV20] gi|2500690|sp|Q46125|HISJ_CAMJE RecName: Full=Histidine-binding protein; Short=HBP; AltName: Full=p29; Flags: Precursor gi|1477741|gb|AAC35419.1| histidine periplasmic binding protein P29 [Campylobacter coli] gi|1813951|emb|CAA71823.1| CjaC [Campylobacter jejuni] gi|57020868|gb|EAL57532.1| histidine-binding protein precursor [Campylobacter coli RM2228] gi|304443952|gb|EFM36609.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Campylobacter coli JV20] Length = 256 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 72/240 (30%), Gaps = 17/240 (7%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++ LF + T + + LK G F + + Sbjct: 1 MKKFLTAFLVAFTGLFLVACQNTKTENNASNEANTTLTLKVGTAPNYKPFNFKQDS-KLT 59 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD D ++ + +I ++ N AL+S +ID+++ T R + Sbjct: 60 GFDTDLIEEIAKK---NGIEIVWVETNFDGLIPALKSGKIDMIASAMSATDER--RQSVD 114 Query: 118 FR-PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F P + + + + L G I VQ GT L + Sbjct: 115 FTKPYYMSKNLYLKLKNNDSLQTKNDLEGKKIGVQLGT-----LQENTAKAIKNAQVQSN 169 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + A + ++ DA D + P + + A + + Sbjct: 170 KDLNIAVLALKNNKIDAIVADQDTAKGFLA--ENPELVSFYQETDGGEGFSFAFDKNKQK 227 >gi|319944974|ref|ZP_08019236.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lautropia mirabilis ATCC 51599] gi|319741544|gb|EFV93969.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lautropia mirabilis ATCC 51599] Length = 280 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 93/271 (34%), Gaps = 20/271 (7%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + S+L + + + A DI+K G L L F + GF+V+ Sbjct: 27 NLLRSVLAGVCVALAASGVQARSWADIEKSGTLIAATGGDLKPFNYFEGK-QLTGFEVEL 85 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 A++ + K+++ L+ LQ + D+ + T R + F Y Sbjct: 86 TDAIARKLG---LKVEWKVLSFDSLLAGLQRDRWDLAISSHGITEERAKV--VDFTNPHY 140 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G + K ++ + L+G ++ VQ GTT L + F + Sbjct: 141 CGGATIVS-KDGKVAKAADLAGKTVAVQTGTTYLERLRKM----DGIGSVRNFPLDRDAR 195 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 AA + R DA+ D +I+ +A A+ +G+TE Sbjct: 196 AATVSGRADAWVTDKFVAMEAIKLVPDSGLKQ--GEILFPERMAGAMSKGNTEL------ 247 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 A + ++SK + D++ Sbjct: 248 -VKAFNKGLAEVMVDGTYEKLSKKYFDQDIR 277 >gi|217424367|ref|ZP_03455866.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 576] gi|217392832|gb|EEC32855.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia pseudomallei 576] Length = 250 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 95/283 (33%), Gaps = 39/283 (13%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + F +I+ L ++ ++ +A L G +T + F + + + GFD+ Sbjct: 3 RRSFIKTIVALALVGASAAGAHA---------KELVVGTDTSFMPFEFKQGD-KYVGFDL 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D ++ + P++ ALQ++ ID+ T E + F Sbjct: 53 DLWAEIAK---GAGWTYKIQPMDFAGLIPALQTQNIDVALSGM--TNKEERRKAIDFSDP 107 Query: 122 TYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + I S+ L+G I + GT T D+ KAH F ++ Sbjct: 108 YYDSGLAAMVQANNTTIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A R DA + + N+ + +S +G Sbjct: 164 QAYLALEAGRVDA-AMHDTPNVLFFVNNEGKGRVKVAGAPVSGDKYGIGFPKGSP----- 217 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKS 282 A V AE + ++ D + +++ G + Sbjct: 218 ----LVAKVNAE--------LARMKADGRYAKIYKKWFGSEPP 248 >gi|34498424|ref|NP_902639.1| amino acid ABC transporter, periplasmic-binding protein [Chromobacterium violaceum ATCC 12472] gi|34104278|gb|AAQ60637.1| amino acid ABC transporter, periplasmic-binding protein [Chromobacterium violaceum ATCC 12472] Length = 263 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 85/240 (35%), Gaps = 14/240 (5%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 ++ +++L I+K G L G+ ++++ A G +GF+VDF RAL Sbjct: 10 ALCVVMLLSLAPAQGGGDEWARIRKDGALLIGLEGTFPPYSQL-AGGQLQGFEVDFGRAL 68 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++ + ++ + +L + ++D + T R F + G Sbjct: 69 AAQMGVTA---RFQTMVWDHMLDSLAAGRLDAVINQVVATPAR--GKRFDFSIPYTYSGL 123 Query: 128 GFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 ++ K L+GA + V AGT E L D H +++ Sbjct: 124 QLVVRKPDLTRFRGARDLAGAHVGVSAGTNYEQWLRDNAPQA----HIHLYQDDPTKFDG 179 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R DA + L A L E V ++++ + +G+ V+ Sbjct: 180 LRRGEVDAIVINR--LAAFNLALKSQGELVPTGRVLAREDACVVLRKGNPRLLAEVNRAI 237 >gi|329577884|gb|EGG59305.1| ABC transporter, permease protein [Enterococcus faecalis TX1467] Length = 487 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 77/234 (32%), Gaps = 15/234 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDD 74 T + N + I ++G L G++ + V GFD+ + ++ + Sbjct: 27 TFAAENDPVYDKIIQKGELVVGLSADYAPYEFHAKVDGEDKIVGFDISIAQKIADDLGVK 86 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ L AL++ +ID++ T R + F Q I+ K+ Sbjct: 87 ---LKIEELGFDALLGALKTGKIDMVISGMSPTPERLKEVA--FSQPYMNVQQRVIVRKE 141 Query: 135 --KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 S G Q TT E + + P +++ ++ + ++ D Sbjct: 142 DKDKFHSTKDFEGVRAGAQKQTTQEELIKTEL----IGAVPTSLQKIPDLIMNLKNNKLD 197 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 A + A N+ + + + SK A A + V+ + Sbjct: 198 AVVMEEPVGEAYVSQNEDLAFANVTFEKGSKD-TAVAFPKDAPVLTEKVNASIK 250 >gi|289667487|ref|ZP_06488562.1| putative carboxycyclohexadienyl dehydratase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 257 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 31/252 (12%), Positives = 82/252 (32%), Gaps = 6/252 (2%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + + + ++ + AS L + + G L+ ++ ++ +G ++G D+D Sbjct: 2 RYRICLALVLSCGMAHAAAPASRLDVVLQSGVLRVCTTGDYRPYSLLREDGQFEGSDIDL 61 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 ++L++++ ++++++ + + L +++ DI TL R+ + Sbjct: 62 AQSLATSLG---ARVRFVRTSWPQLMPDLLAERCDIAVGGISVTLQRQRQASFSAVLDVD 118 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 + S+ QL+ + V + + + + +F I Sbjct: 119 GKIPLVRCADQARYRSMEQLNRPQVRVIEPPGGTN--EAFARCELPRANVRLFADNTTIF 176 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 R D D S + + A + + D W V Sbjct: 177 EELLEQRADVMITDASEALYQQARLPGLCAIAPEHPLQYSE-KAFLLPRDDQAWKAYVDQ 235 Query: 244 THYAMVTAEELG 255 + + E Sbjct: 236 WLHLSKASGEYR 247 >gi|226357683|ref|YP_002787422.1| amino acid ABC transporter, periplasmic component [Deinococcus deserti VCD115] gi|226319925|gb|ACO47918.1| putative amino acid ABC transporter, periplasmic component [Deinococcus deserti VCD115] Length = 254 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 86/243 (35%), Gaps = 15/243 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L + + A L DIK G LK + F + G KGF+VD Sbjct: 3 LKISLLAGLALMVGSAAQARTLSDIKASGVLKVATSADFEPFNYM-KGGVAKGFEVDLAE 61 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSK--QIDILSRNTDWTLLREISLGLAFRPITY 123 ++ + +I+++ + + +ID++ + R + + F Y Sbjct: 62 QVARQMG---LRIEWVVRPFDGLLKEVNDRPKEIDVVIASHAINSTRAKT--VEFASPHY 116 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G + K + + L+G + +AG+T L + V+ + Sbjct: 117 CTGGVILTRKGGPL-TTKALAGKKLGAEAGSTYFSFL----RKLPFDKSVQVYNSSLAVT 171 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A + A D A++ P ++L + + K +A A +G+TE V+ Sbjct: 172 TAVATGQVAAIVTDR--FAAIEAQKTFPKAGLVLGETLWKEQIAMAFAKGNTELKTAVNA 229 Query: 244 THY 246 + Sbjct: 230 ALH 232 >gi|90961557|ref|YP_535473.1| glutamine-binding protein / glutamine transport system permease protein [Lactobacillus salivarius UCC118] gi|90820751|gb|ABD99390.1| Glutamine-binding protein / Glutamine transport system permease protein [Lactobacillus salivarius UCC118] Length = 485 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 74/236 (31%), Gaps = 13/236 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++F + F S+ D K + F + + G D Sbjct: 1 MKKFITFLSIISSLIFLSFFVKPQSVHADEK---TYTIATDVTFPPFEYADDSNKYVGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + K+ P+ ++ + Q+D + T R+ F Sbjct: 58 IDLMNAIAKE---EGFKVDLKPIGFNAALQSVSAGQVDGMIAGMTITDERK--QKFDFSK 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + I S+ QL G + ++ GT+ + K + F+ + Sbjct: 113 PYYSSGIVMAVKPDSSIKSLKQLRGKKVAIKTGTSGADYANSIKDKYGFKT--VTFDDSD 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + A D L+ I+ + A+ +G + Sbjct: 171 NMYNDVKNGNSVACFED---SAVLEYGISTGLGLKIVTKPANSGNFGFAVKKGTHQ 223 >gi|58336481|ref|YP_193066.1| glutamine ABC transporter permease protein [Lactobacillus acidophilus NCFM] gi|227903033|ref|ZP_04020838.1| glutamine ABC superfamily ATP binding cassette transporter permease protein [Lactobacillus acidophilus ATCC 4796] gi|58253798|gb|AAV42035.1| glutamine ABC transporter permease protein [Lactobacillus acidophilus NCFM] gi|227869207|gb|EEJ76628.1| glutamine ABC superfamily ATP binding cassette transporter permease protein [Lactobacillus acidophilus ATCC 4796] Length = 491 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 85/262 (32%), Gaps = 26/262 (9%) Query: 1 MYK--DFFVSILCLIILFFTSFST--------NASILGDIKKRGFLKCGINTGLVGFAE- 49 M K F++ + LI F + + +++ IK+ L G + Sbjct: 1 MKKAKIIFLAFITLISTLFLFNQSVSAAKKVEDGTVMKKIKQSKELVVGTSADYPPLEFT 60 Query: 50 --VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107 V N + G D++ + ++ + +K+ ++ +AL++ ++D++ Sbjct: 61 TSVGGNTKYVGVDIELAKDIAKDL---HAKLVIKNMSFDSLLVALETGKVDMVISAMTPN 117 Query: 108 LLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164 R+ + F I Y + + +G ++ Q G+ + Sbjct: 118 PERKK--SVDFSKIYYKPSGEYFLINKRDQAKYKKIKDFAGQTVGAQTGSIQYQLIQSQM 175 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 K K ++ + A ++ + + ND V ++ Sbjct: 176 KKSKAKG----LGKINNLVLALKSGKMSGVVMEE-LTAKAYAKNDNSLMAVRSDLREEQA 230 Query: 225 PLAPAIIQGDTEWYNIVSWTHY 246 A A+ +G V+ T Sbjct: 231 GNAVAVAKGQPGLIRAVNKTIN 252 >gi|172060122|ref|YP_001807774.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171992639|gb|ACB63558.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 264 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 69/221 (31%), Gaps = 13/221 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F +G GFD+D A+ + + K ++ + ALQ Sbjct: 30 KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---NVKCVWVENDFDGLIPALQ 86 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152 +++ D ++ + T R+ +AF Y I + G+ + L G + V Sbjct: 87 ARKFDAINSDMTITDQRK--HAIAFTDPIYTIPNQLIAKQGSGLQPTPQALKGKRVGVLQ 144 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA-YTGDISALYALKLTNDRP 211 GT E + + ++ + A ++ R DA + + Sbjct: 145 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGSKGFLSKPQGQ 202 Query: 212 SEHVILPDIISKSPL----APAIIQGDTEWYNIVSWTHYAM 248 + L + + D + + Sbjct: 203 GFGFAGGTVADAEILGSGVGFGLRKNDAALKTALDQALKGL 243 >gi|257889501|ref|ZP_05669154.1| extracellular solute-binding protein, family 3 [Enterococcus faecium 1,231,410] gi|257825861|gb|EEV52487.1| extracellular solute-binding protein, family 3 [Enterococcus faecium 1,231,410] Length = 232 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 66/215 (30%), Gaps = 12/215 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-----SILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K +++ ++ T A + +++K+ L + L + + Sbjct: 1 MKKKRLFALITSAFFILSACGTAAANQEDNSWSNVEKKKELVVATSGTLFPASYYNDQNE 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+DVD + ++ + KI + N + ++ ++ D + + T RE Sbjct: 61 LVGYDVDLAKEVAKRL---NVKISFKEYNVDGQITSVSKRESDFAANDFGITKEREKKFS 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 L+ FD GI S+ L G + T+ + H K Sbjct: 118 LSETFKYSFDSMIVRKKDDSGIHSLEDLKGKKAAGEPNTSYMRL----AEKHGAKLVTYD 173 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + R D D Sbjct: 174 NATNDQYLSDVANGRTDVILNDYYLQKMAVSALPD 208 >gi|104782884|ref|YP_609382.1| arginine/ornithine periplasmic-binding protein AotJ [Pseudomonas entomophila L48] gi|95111871|emb|CAK16595.1| arginine/ornithine periplasmic-binding protein AotJ [Pseudomonas entomophila L48] Length = 248 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 76/219 (34%), Gaps = 13/219 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 LK GI FA + +G GFD D AL + +K ++ AL+ + Sbjct: 13 LKIGIEAAYPPFAFKQPDGSIAGFDYDIGNALCEEM---KAKCTWVEQEFDGLIPALKVR 69 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGT 154 +ID + + T R+ + F Y +M + + S+ +L G I VQ G+ Sbjct: 70 KIDAILSSMSITDDRKK--SVDFSKRYYLTPARLVMKEGTTVSESLDELKGKKIGVQRGS 127 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + + + + EI A R D D + L L D Sbjct: 128 IHDRFAKEVLAPKG--ATVVPYGTQNEIYLDVAAGRLDGTVADATLLEDGFLKTDAGKGF 185 Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAM 248 + + A+ +GD E + ++ A+ Sbjct: 186 AFVGPSFTDVKYFGDGVGIAVRKGDKENADRINAAIDAI 224 >gi|300715981|ref|YP_003740784.1| Extracellular solute-binding protein, family 3 [Erwinia billingiae Eb661] gi|299061817|emb|CAX58933.1| Extracellular solute-binding protein, family 3 [Erwinia billingiae Eb661] Length = 273 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 84/256 (32%), Gaps = 15/256 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K ++ ++L S + A + +K +G L I G Sbjct: 1 MKKIVLTAVAAAVLL--NSAAWAAELPAALKAKGALTVAIMPNYPPMEFKDPATNTLTGV 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD A+ + I + + ++ A+ +K++D++ T R+ ++F Sbjct: 59 DVDLGNAIGEKLGVK---INWQEIAFEQMVNAVSTKRVDMVMSGMTDTAERQKV--VSFI 113 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-----NMKYHPI 174 Q + + +K I+S + L G + TT +A + +A+ + Sbjct: 114 DYFTTGPQFYTLAARKDINSATDLCGKKVGTSRRTTFPQEIAKWSQANCEAKGKPAIVVV 173 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E + R R D L + + L I+ AI + D Sbjct: 174 GAEGTADARTQLRQRRLDGAVQGSETLPYVMNLEKN--TYKPLDKAIASQFTGMAIDKND 231 Query: 235 TEWYNIVSWTHYAMVT 250 V AM+ Sbjct: 232 PALIAAVQGAVNAMIA 247 >gi|256957248|ref|ZP_05561419.1| amino acid ABC transporter [Enterococcus faecalis DS5] gi|257077778|ref|ZP_05572139.1| his/Glu/Gln/Arg/opine ABC transporter permease [Enterococcus faecalis JH1] gi|294781304|ref|ZP_06746650.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|307267969|ref|ZP_07549357.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|256947744|gb|EEU64376.1| amino acid ABC transporter [Enterococcus faecalis DS5] gi|256985808|gb|EEU73110.1| his/Glu/Gln/Arg/opine ABC transporter permease [Enterococcus faecalis JH1] gi|294451640|gb|EFG20096.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|306515610|gb|EFM84137.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|315032477|gb|EFT44409.1| ABC transporter, permease protein [Enterococcus faecalis TX0017] gi|315034288|gb|EFT46220.1| ABC transporter, permease protein [Enterococcus faecalis TX0027] gi|323480074|gb|ADX79513.1| his/Glu/Gln/Arg/opine amino ABC transporter [Enterococcus faecalis 62] Length = 487 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 76/234 (32%), Gaps = 15/234 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDD 74 T + N + I ++G L G++ + V GFD+ + ++ + Sbjct: 27 TFAAENDPVYDKIIQKGELVVGLSADYAPYEFHAKVDGEDKIVGFDISIAQKIADDLGVK 86 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ L AL++ +ID++ T R + F Q I+ K+ Sbjct: 87 ---LKIEELGFDALLGALKTGKIDMVISGMSPTPERLKEVA--FSQPYMNVQQRVIVRKE 141 Query: 135 --KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 S G Q TT E + P +++ ++ + ++ D Sbjct: 142 DKDKFHSTKDFEGVRAGAQKQTTQEELIKTEL----TGAVPTSLQKIPDLIMNLKNNKLD 197 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 A + A N+ + + + SK A A + V+ + Sbjct: 198 AVVMEEPVGEAYVSQNEDLAFANVTFEKGSKD-TAVAFPKDAPVLTEKVNASIK 250 >gi|91226242|ref|ZP_01261082.1| putative cyclohexadienyl dehydratase precursor signal peptide protein [Vibrio alginolyticus 12G01] gi|269965301|ref|ZP_06179422.1| putative cyclohexadienyl dehydratase precursor signal peptide protein [Vibrio alginolyticus 40B] gi|91189253|gb|EAS75532.1| putative cyclohexadienyl dehydratase precursor signal peptide protein [Vibrio alginolyticus 12G01] gi|269830102|gb|EEZ84330.1| putative cyclohexadienyl dehydratase precursor signal peptide protein [Vibrio alginolyticus 40B] Length = 258 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 78/245 (31%), Gaps = 14/245 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K V L + +L T + S L I G L+ G ++GF Sbjct: 1 MRKILLV--LGMCLLAATQVAHAESRLQSILDNGVLRVGTTGDWNPMTMKDPATNSYRGF 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D L+ + ++Y+P + K + + + D ++ + + R G + Sbjct: 59 DIDVTTELAKDLGVK---VEYVPTDWKTLVNGITANKYD-ITGSASLNMSRAKVAGYSQP 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFE 177 S + + + V A T E + ++F + IV E Sbjct: 115 YFYLAFVPVVQKKDLAKFSDWADFNKPEVKVAATLGTVQEKMVKEFFPSAQH----IVIE 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A R D L + V + +P+A + Q D W Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVDKFKQ-LAIVPVTAPRKPTPIAMLLPQDDQVW 229 Query: 238 YNIVS 242 N ++ Sbjct: 230 INYIN 234 >gi|83717600|ref|YP_440544.1| glutamine ABC transporter periplasmic protein [Burkholderia thailandensis E264] gi|167579227|ref|ZP_02372101.1| glutamine ABC transporter periplasmic protein [Burkholderia thailandensis TXDOH] gi|167617348|ref|ZP_02385979.1| glutamine ABC transporter periplasmic protein [Burkholderia thailandensis Bt4] gi|257141205|ref|ZP_05589467.1| glutamine ABC transporter periplasmic protein [Burkholderia thailandensis E264] gi|83651425|gb|ABC35489.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia thailandensis E264] Length = 253 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 52/284 (18%), Positives = 95/284 (33%), Gaps = 35/284 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ + L SF++ AS L G +T + F + + + GFD Sbjct: 1 MGRRSFIKTFVAVALAGASFASLASAHAK-----ELIVGTDTSFMPFEFKQGD-KYVGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + P++ ALQ++ ID+ R+ + F Sbjct: 55 LDLWAEIAKDAGW---TYKIQPMDFAGLIPALQTQNIDVALSGMTIKEERKK--AIDFSD 109 Query: 121 ITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G + I S+ L+G I + GT T D+ KAH F + Sbjct: 110 PYYDSGLAAMVQTNDATIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNI 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ A A R DA + + N+ + +S +G Sbjct: 166 DQAYLALEAGRVDA-AMHDTPNVLFFVNNEGKGRVKVAGTPVSGDKYGIGFPKGSP---- 220 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKS 282 A V AE + ++ D + +++ G + Sbjct: 221 -----LVAKVNAE--------LAKMKADGRYAKIYKKWFGSEPP 251 >gi|332040175|gb|EGI76556.1| extracellular solute-binding protein family 3 [Hylemonella gracilis ATCC 19624] Length = 298 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 90/232 (38%), Gaps = 9/232 (3%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFC 64 F +++ + + + + IK+ G L+ G F+ + +G +GFD Sbjct: 32 FDALIAQGPVASAATIRSNAWASKIKQAGTLRLGGLQTSNLFSLLNEKDGKTRGFDAGLA 91 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ I D +K+Q+ + + R L + Q+D++ T R + ++F Y Sbjct: 92 QLITRYILGDGAKVQFTQVTSSTREQVLINDQVDMVIATYSITPAR--TEKISFAGPYYS 149 Query: 125 DGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G ++ I S + L+G + QAG+T LA Y F+ +E Sbjct: 150 SQAGVLVKANNKTIQSYNDLAGKKVATQAGSTGPTILAQYAPKG----VVQEFQTHQEAL 205 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 A R R DAY D + L L+ + ++ + +G Sbjct: 206 DALRQGRVDAYVTDYTLLL-NALSLGTGDAKLAGAPFGAQDSYGVGLPKGSD 256 >gi|259507458|ref|ZP_05750358.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium efficiens YS-314] gi|259164946|gb|EEW49500.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium efficiens YS-314] Length = 289 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 37/242 (15%), Positives = 74/242 (30%), Gaps = 15/242 (6%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA----LS 68 I L S L + G + G G + G DVD + ++ Sbjct: 17 ITLTACGDSEGGDGLLAAIENGNVTIGTKYDQPGLGLRNPDNSMSGLDVDVAQYVVNSIA 76 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 D +++ + +R +Q+ ++D+++ R S + F Q Sbjct: 77 DDNGWDHPTVEWRETPSAQRETLIQNGEVDMIAATYSINPGR--SESVNFGGPYLLTHQA 134 Query: 129 FIMH-KKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++ I ++ L G +C G+T + D ++ A Sbjct: 135 LLVREDDDRIQTLEDLDDGLILCSVTGSTPAQKVKDVLP----GVQLQEYDTYSSCVEAL 190 Query: 187 RAHRCDAYTGDISALYALKLTNDRP---SEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 DA T D + L+ + E + + I + DTE + ++ Sbjct: 191 SQGNVDAMTTDATILFGYAQQREGEFRVVEMEQDGEPFTNEYYGIGITKDDTEATDAINA 250 Query: 244 TH 245 Sbjct: 251 AL 252 >gi|227823074|ref|YP_002827046.1| putative solute-binding component of ABC transporter [Sinorhizobium fredii NGR234] gi|227342075|gb|ACP26293.1| putative solute-binding component of ABC transporter [Sinorhizobium fredii NGR234] Length = 264 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 88/256 (34%), Gaps = 11/256 (4%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++L + A + DIK G + GI + F+ A+ KG+DVD Sbjct: 6 KLKAMFTAALMLGAATGMARADAVDDIKAAGQINVGIFSDFPPFSSASADMSIKGYDVDV 65 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + ++ A+ ++ + + + R L K++DIL +E + + F Sbjct: 66 AQQIADALG---VRLNLVSVTGQNRIPYLNDKRVDIL---MSVGYSKERAEVIDFAAAYA 119 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 I + ++ L+ +I V GT + +L + A F+ + Sbjct: 120 PYYIAVIGPAELKVAGKEDLADKTIAVNRGTLEDTSLTEAAPA---SASIQRFDNYNAVI 176 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A+ + + + + + S S + + + + V+ Sbjct: 177 QAFISGQTQLMVVGNDVGAQVLARQEALKPEQKFQLLTSPSHIG--LNKNEERLKQSVND 234 Query: 244 THYAMVTAEELGITQK 259 T M+ +L + + Sbjct: 235 TVAKMLADGKLNESSQ 250 >gi|163800523|ref|ZP_02194424.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio sp. AND4] gi|159175966|gb|EDP60760.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio sp. AND4] Length = 272 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 83/251 (33%), Gaps = 11/251 (4%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K ++L + I + + A+ + IK+RG L+ G++T V +A G+ Sbjct: 1 MKLFKTTITALLGIAIALPSLANEKAATPNVDQIKERGTLRVGMST-FVPWAMRNKQGEL 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GF++D + L++ K++++P AL +K+ D++ T R S + Sbjct: 60 IGFEIDVAKRLAADSG---LKVEFVPTAWDGIIPALLAKKFDVIIGGMSITPER--SKSV 114 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F G + K S V+ + K + F Sbjct: 115 LFTEPYSHSGVQVAANTKLAEGFSEFSDFNSRRVKIAVRRGAYTVQVARETFPKAKLLQF 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + A + + + +SK A A+ G+ + Sbjct: 175 DDDAQAFQEVLNGNAHAVIASSPKPEHESIKHADKL-FTPFSERLSKGNEAFAVRLGEED 233 Query: 237 WYNIVSWTHYA 247 + A Sbjct: 234 KKAFFNQWIAA 244 >gi|186472109|ref|YP_001859451.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184194441|gb|ACC72405.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 269 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 71/224 (31%), Gaps = 11/224 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 +A L I K G ++ G+ F + + +G+D++ + ++ ++ + Sbjct: 32 AHADALDTITKAGVVRVGVFMDYPPFGSIGPDMKPQGYDIEVANLIGKSLGVK---VELV 88 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + R L + D+L T RE + F K + + Sbjct: 89 AVTGDNRMAYLADHKADMLLS-VGQTPEREKV--IDFSQPYAPYYLAVFGPKSLKVKDAN 145 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L+G SI V GT +L++ + F+ +A+ + + Sbjct: 146 DLAGKSISVARGTLEDLSVTKIAP---PSANIKRFDDPNGAISAFLSGQVQLMVVGNDVG 202 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + P+ + SP + + + V T Sbjct: 203 ATILAR--HPANDPEQKFSLFSSPDHVGLNKNEPRLLKKVDDTI 244 >gi|229551204|ref|ZP_04439929.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|229315496|gb|EEN81469.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] Length = 498 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 98/318 (30%), Gaps = 26/318 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + + L T + + G + F + + G D Sbjct: 13 MKRVWKWCVAGVAALILTLSMAMP--VSTHAAKKTYVIGTDVTYAPFEFADKHNQYVGID 70 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ A + ++ PL AL++ QID + T R+ + Sbjct: 71 IDLMQAIAKA---EGFRVDIKPLGFNAAVQALEAHQIDGVIAGMQITPERKQKFAM--SD 125 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + K G++ + L G + ++ GT + + F+ Sbjct: 126 PYYKTAVAMAVAKNSGVNQLKDLRGKRVALKTGTAAADF--AMSLKSKYGFSTVTFDDSN 183 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---- 236 + A D L T + + S A +G ++ Sbjct: 184 NMYQDVITGNSVACFDDKPVLQYAIAT---GLKLKLAGPESKASYYGFATQKGRSDELDQ 240 Query: 237 -----WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291 + + YA + A+ LG + + + T + FLG+ + + GL Sbjct: 241 KFNAGLKKVKADGTYAKIVAKYLGNGTQAAQKQTSAKTQDTDRSFLGLLRENWGTLMNGL 300 Query: 292 TKDWTYRIIR-----HMG 304 + I+ +G Sbjct: 301 RETMVVTIVAIFFATAVG 318 >gi|258541041|ref|YP_003175540.1| glutamine ABC transporter substrate-binding protein [Lactobacillus rhamnosus Lc 705] gi|257152717|emb|CAR91689.1| ABC transporter, glutamine-binding periplasmic protein [Lactobacillus rhamnosus Lc 705] Length = 486 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 98/318 (30%), Gaps = 26/318 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + + L T + + G + F + + G D Sbjct: 1 MKRVWKWCVAGVAALILTLSMAMP--VSTHAAKKTYVIGTDVTYAPFEFADKHNQYVGID 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ A + ++ PL AL++ QID + T R+ + Sbjct: 59 IDLMQAIAKA---EGFRVDIKPLGFNAAVQALEAHQIDGVIAGMQITPERKQKFAM--SD 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + K G++ + L G + ++ GT + + F+ Sbjct: 114 PYYKTAVAMAVAKNSGVNQLKDLRGKRVALKTGTAAADF--AMSLKSKYGFSTVTFDDSN 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---- 236 + A D L T + + S A +G ++ Sbjct: 172 NMYQDVITGNSVACFDDKPVLQYAIAT---GLKLKLAGPESKASYYGFATQKGRSDELDQ 228 Query: 237 -----WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291 + + YA + A+ LG + + + T + FLG+ + + GL Sbjct: 229 KFNAGLKKVKADGTYAKIVAKYLGNGTQAAQKQTSAKTQDTDRSFLGLLRENWGTLMNGL 288 Query: 292 TKDWTYRIIR-----HMG 304 + I+ +G Sbjct: 289 RETMVVTIVAIFFATAVG 306 >gi|227517812|ref|ZP_03947861.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|229546739|ref|ZP_04435464.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|229548830|ref|ZP_04437555.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|255971345|ref|ZP_05421931.1| amino acid ABC transporter [Enterococcus faecalis T1] gi|256617763|ref|ZP_05474609.1| amino acid ABC transporter [Enterococcus faecalis ATCC 4200] gi|256761649|ref|ZP_05502229.1| amino acid ABC transporter [Enterococcus faecalis T3] gi|256854261|ref|ZP_05559625.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256960019|ref|ZP_05564190.1| arpJ [Enterococcus faecalis Merz96] gi|256964286|ref|ZP_05568457.1| arpJ [Enterococcus faecalis HIP11704] gi|257081138|ref|ZP_05575499.1| amino acid-binding/permease [Enterococcus faecalis E1Sol] gi|257083807|ref|ZP_05578168.1| amino acid ABC transporter [Enterococcus faecalis Fly1] gi|257089304|ref|ZP_05583665.1| ABC amino acid transporter [Enterococcus faecalis CH188] gi|257415457|ref|ZP_05592451.1| arpJ [Enterococcus faecalis AR01/DG] gi|257421139|ref|ZP_05598129.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|293383772|ref|ZP_06629679.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis R712] gi|293388752|ref|ZP_06633245.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis S613] gi|300860123|ref|ZP_07106211.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|307271893|ref|ZP_07553161.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|307275311|ref|ZP_07556454.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|307290910|ref|ZP_07570800.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|312901565|ref|ZP_07760838.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|312904453|ref|ZP_07763612.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|312907012|ref|ZP_07766008.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|312952839|ref|ZP_07771701.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|312978730|ref|ZP_07790457.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|227074736|gb|EEI12699.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|229306059|gb|EEN72055.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|229308088|gb|EEN74075.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|255962363|gb|EET94839.1| amino acid ABC transporter [Enterococcus faecalis T1] gi|256597290|gb|EEU16466.1| amino acid ABC transporter [Enterococcus faecalis ATCC 4200] gi|256682900|gb|EEU22595.1| amino acid ABC transporter [Enterococcus faecalis T3] gi|256709821|gb|EEU24865.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256950515|gb|EEU67147.1| arpJ [Enterococcus faecalis Merz96] gi|256954782|gb|EEU71414.1| arpJ [Enterococcus faecalis HIP11704] gi|256989168|gb|EEU76470.1| amino acid-binding/permease [Enterococcus faecalis E1Sol] gi|256991837|gb|EEU79139.1| amino acid ABC transporter [Enterococcus faecalis Fly1] gi|256998116|gb|EEU84636.1| ABC amino acid transporter [Enterococcus faecalis CH188] gi|257157285|gb|EEU87245.1| arpJ [Enterococcus faecalis ARO1/DG] gi|257162963|gb|EEU92923.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|291078848|gb|EFE16212.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis R712] gi|291081909|gb|EFE18872.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis S613] gi|295113911|emb|CBL32548.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)/amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Enterococcus sp. 7L76] gi|300850941|gb|EFK78690.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|306497980|gb|EFM67507.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|306507945|gb|EFM77072.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|306511399|gb|EFM80401.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|310626997|gb|EFQ10280.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|310629355|gb|EFQ12638.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|310632151|gb|EFQ15434.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|311288437|gb|EFQ66993.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|311291360|gb|EFQ69916.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|315029764|gb|EFT41696.1| ABC transporter, permease protein [Enterococcus faecalis TX4000] gi|315148051|gb|EFT92067.1| ABC transporter, permease protein [Enterococcus faecalis TX4244] gi|315149654|gb|EFT93670.1| ABC transporter, permease protein [Enterococcus faecalis TX0012] gi|315152966|gb|EFT96982.1| ABC transporter, permease protein [Enterococcus faecalis TX0031] gi|315155197|gb|EFT99213.1| ABC transporter, permease protein [Enterococcus faecalis TX0043] gi|315157525|gb|EFU01542.1| ABC transporter, permease protein [Enterococcus faecalis TX0312] gi|315163047|gb|EFU07064.1| ABC transporter, permease protein [Enterococcus faecalis TX0645] gi|315171996|gb|EFU16013.1| ABC transporter, permease protein [Enterococcus faecalis TX1342] gi|315174863|gb|EFU18880.1| ABC transporter, permease protein [Enterococcus faecalis TX1346] gi|315577324|gb|EFU89515.1| ABC transporter, permease protein [Enterococcus faecalis TX0630] gi|327534474|gb|AEA93308.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis OG1RF] Length = 487 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 76/234 (32%), Gaps = 15/234 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDD 74 T + N + I ++G L G++ + V GFD+ + ++ + Sbjct: 27 TFAAENDPVYDKIIQKGELVVGLSADYAPYEFHAKVDGEDKIVGFDISIAQKIADDLGVK 86 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ L AL++ +ID++ T R + F Q I+ K+ Sbjct: 87 ---LKIEELGFDALLGALKTGKIDMVISGMSPTPERLKEVA--FSQPYMNVQQRVIVRKE 141 Query: 135 --KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 S G Q TT E + P +++ ++ + ++ D Sbjct: 142 DKDKFHSTKDFEGVRAGAQKQTTQEELIKTEL----TGAVPTSLQKIPDLIMNLKNNKLD 197 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 A + A N+ + + + SK A A + V+ + Sbjct: 198 AVVMEEPVGEAYVSQNEDLAFADVTFEKGSKD-TAVAFPKDAPVLTEKVNASIK 250 >gi|213647483|ref|ZP_03377536.1| glutamate and aspartate transporter subunit [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 201 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 63/175 (36%), Gaps = 11/175 (6%) Query: 3 KDFFVSILCLIILFFTSFS-----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++L + + + + S L I K G + G V F+ Sbjct: 4 RKLTTAMLVMGLSAGLAHAEDGAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVV 63 Query: 58 GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ D+ A+ + +++ +P+ ++ R LQ+ D +T L R+ Sbjct: 64 GYSQDYSNAIVEVVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQ 123 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 F + G + K I L G ++ V +GTT+E+ L + Sbjct: 124 AA--FSDTIFVVGTRLLTKKGGDIKDFPDLKGKAVVVTSGTTSEILLHKLNEEQK 176 >gi|148728146|gb|ABR08652.1| CyuC-like protein [Lactobacillus sanfranciscensis] Length = 257 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 79/250 (31%), Gaps = 18/250 (7%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + + L L + N S D K G L G+ +A +G GF Sbjct: 1 MKKKLGLLLTIGLSALLLVACG-NKSKQADTKTPGTLTIGMEGTYAPYAYRAKDGKLTGF 59 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +V+ R + + P +++ L S Q D++ + R+ + Sbjct: 60 EVELARDTAKRMGLKP---KFVTTGWDSLIAGLGSNQYDVIFNDMWVNPARKKQFR--YA 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I +S L G I GT ++ A + + Sbjct: 115 TPYIYSKSVLISK---PGLKMSNLKGKMIAAGTGT------ENWTTAEKLGAKVVAAPDF 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISK-SPLAPAIIQGDTEW 237 + R D +A K ++ + ++P K P+AP + + T+ Sbjct: 166 QTDMDMINQGRADGAVNSEAAFNYWKKSHKDTDLTYQVIPYKYIKIEPIAPMLNKKSTKL 225 Query: 238 YNIVSWTHYA 247 ++ A Sbjct: 226 TKEMNKALKA 235 >gi|315145819|gb|EFT89835.1| ABC transporter, permease protein [Enterococcus faecalis TX2141] Length = 487 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 76/234 (32%), Gaps = 15/234 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDD 74 T + N + I ++G L G++ + V GFD+ + ++ + Sbjct: 27 TFAAENDPVYDKIIQKGELVVGLSADYAPYEFHAKVDGEDKIVGFDISIAQKIADDLGVK 86 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ L AL++ +ID++ T R + F Q I+ K+ Sbjct: 87 ---LKIEELGFDALLGALKTGKIDMVISGMSPTPERLKEVA--FSQPYMNVQQRVIVRKE 141 Query: 135 --KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 S G Q TT E + P +++ ++ + ++ D Sbjct: 142 DKDKFHSTKDFEGVRAGAQKQTTQEELIKTEL----TGAVPTSLQKIPDLIMNLKNNKLD 197 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 A + A N+ + + + SK A A + V+ + Sbjct: 198 AVVMEEPVGEAYVSQNEDLAFADVTFEKGSKD-TAVAFPKDAPVLTEKVNASIK 250 >gi|312863035|ref|ZP_07723273.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus vestibularis F0396] gi|311100571|gb|EFQ58776.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus vestibularis F0396] Length = 265 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 34/261 (13%), Positives = 78/261 (29%), Gaps = 15/261 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M K +F+ + F + S + + IK++ + + F V Sbjct: 1 MKKFWFILTALVATCFLVACSGSQGVNTKTIKEKKKIVVATESEFAPFEFKSLVNGKDTL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ +A+ + +++ ++ ++QS + DI T R+ Sbjct: 61 VGADIELAKAIGERLGVK---VEFSVMSFDNVLASVQSGKSDIAIAGISVTDGRKKV--Y 115 Query: 117 AFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y I+ K +S L+ ++ Q G+ E + Sbjct: 116 DFSDSYYTSENVVIVKKDKVNDFTSADSLAKQTVGTQKGSVQETVAKKQISKA----SVV 171 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E+ ++ + A + + ND + A A +G Sbjct: 172 SLASNGEMINELKSGQIQAVVLEKAIAEGYIAQNDDLTLANFNLKSDGSDAYAVATRKGS 231 Query: 235 TEWYNIVSWTHYAMVTAEELG 255 + ++ + + Sbjct: 232 DDLLKEINTVIKETKDSGKFD 252 >gi|309781433|ref|ZP_07676169.1| amino acid ABC transporter, amino acid-binding/permease protein [Ralstonia sp. 5_7_47FAA] gi|308919846|gb|EFP65507.1| amino acid ABC transporter, amino acid-binding/permease protein [Ralstonia sp. 5_7_47FAA] Length = 247 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 70/210 (33%), Gaps = 12/210 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L+ + V NG GFDVD AL+ + +++ ++ K L S+ Sbjct: 28 LRVATDATFAPMEFV-ENGKRTGFDVDLIEALARTMG---RPVEWTDIDFKGLVPGLISR 83 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 + D+ T R+ + P + + I + + L+G + VQ GT Sbjct: 84 RFDVAISGIYITEERKKVVDFT-VPYYHGGLVAMVKQGNTAIKTPADLNGKKVSVQVGTK 142 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 + L K + K + E+ E++ R DA A Sbjct: 143 SVNYL----KENYPKVERVEVEKNEQMFNLVEIGRADAAVTGRPAAAYYVKARPG---LR 195 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 ++ ++ A+ + E ++ Sbjct: 196 LVEPALTAEEYGIAVRRDQPELTKALNAAL 225 >gi|238761656|ref|ZP_04622631.1| Amino acid-binding protein [Yersinia kristensenii ATCC 33638] gi|238700170|gb|EEP92912.1| Amino acid-binding protein [Yersinia kristensenii ATCC 33638] Length = 262 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 36/247 (14%), Positives = 81/247 (32%), Gaps = 17/247 (6%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M+K V +L + G F + +GF Sbjct: 1 MFKRLMLVGTYLAAVLSAGTAMAVEPTY---------VVGSGGTYRPFEYENSQKQLEGF 51 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D +A+ A + +++ + + F L S DI+ T R+ + F Sbjct: 52 DIDIIKAIGKA---EGFQVKLVNTPWEGIFATLGSGDRDIIISGITITDKRKQM--VDFS 106 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ K + S++ L ++ V +T ++ ++D + F+ Sbjct: 107 DPYFPAEQTIVVPKGSKVDSIAALKNLNVGVVNSSTGDIVVSDVLGKN--STAIKRFDNT 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A GD+ T+ + ++ D + A+ +G+ E + Sbjct: 165 PLMLQELYEDGIAAAVGDVGVAKFYLKTHPDKAFELVADDKFERQYFGIAVAKGNEELRS 224 Query: 240 IVSWTHY 246 ++ Sbjct: 225 KINSGLQ 231 >gi|161525707|ref|YP_001580719.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189349571|ref|YP_001945199.1| periplasmic substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221201060|ref|ZP_03574100.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Burkholderia multivorans CGD2M] gi|221206488|ref|ZP_03579501.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Burkholderia multivorans CGD2] gi|160343136|gb|ABX16222.1| extracellular solute-binding protein family 3 [Burkholderia multivorans ATCC 17616] gi|189333593|dbj|BAG42663.1| periplasmic substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221173797|gb|EEE06231.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Burkholderia multivorans CGD2] gi|221178910|gb|EEE11317.1| lysine-arginine-ornithine-binding periplasmic protein (LAO-binding protein) [Burkholderia multivorans CGD2M] Length = 259 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 78/220 (35%), Gaps = 13/220 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ GI F G +GFDVD A+ + + K ++ ALQ+ Sbjct: 26 TLRFGIEAAYPPFESKTPAGQLQGFDVDIGNAVCAKL---NMKCVWVENAFDGLIPALQA 82 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAG 153 ++ D+++ + T R+ + F P Y I + + + G + V G Sbjct: 83 RKFDVINSAMNITAKRK--QSIDFTPPIYVVPIVMIAKRGSPLRPEVASVRGKRVGVLQG 140 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 ++ E L ++ + + ++ ++I A A R DA + L + Sbjct: 141 SSQEDFLKAHWANAGVS--VVSYQDQDQIYADLVAGRLDAAVQEAQTAQEGFLDKPAGRD 198 Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248 + I+ + + + +GD V A+ Sbjct: 199 YQIVGEPLKDPATLGEGTGFGLRKGDKALQAKVVGALDAL 238 >gi|167589509|ref|ZP_02381897.1| ABC Lysine-arginine-ornithine transporter, periplasmic ligand binding protein [Burkholderia ubonensis Bu] Length = 257 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 72/219 (32%), Gaps = 19/219 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L + + + + S ++ G++ F +G GFD Sbjct: 1 MKK--FALSVALACIAVGAHAKDWST---------IRFGVDASYPPFESKGVDGKVVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + + +K ++ + AL++K+ D + + T R + F Sbjct: 50 VDLGNEICARL---KAKCVWIENDFDGMIPALKAKKFDGVLSSMSMTPARAEQIA--FSD 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I K + L G S+ V+ GT E Y+ + ++ Sbjct: 105 KLFNTPTRLIAKKGSAARPSADALKGKSVGVEQGTIQETYAKTYWAPKG--VQVVPYQNQ 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 + + + R DA D L R + Sbjct: 163 DGVYQDLISGRLDAALQDAVQADIGFLKTPRGAGFQFAG 201 >gi|299537492|ref|ZP_07050786.1| extracellular solute-binding protein [Lysinibacillus fusiformis ZC1] gi|298727053|gb|EFI67634.1| extracellular solute-binding protein [Lysinibacillus fusiformis ZC1] Length = 275 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 95/302 (31%), Gaps = 52/302 (17%) Query: 1 MYKDFFVSILCLIILFFTSFS-----------TNASILGDIK---------KRGFLKCGI 40 M K+ F +L L+I + S +A K K G L + Sbjct: 1 MKKNIFYLLLVLVISLMAACSENKTNTQVPATADAKNEDQDKSVTTEMKLVKDGKLTFAM 60 Query: 41 NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDIL 100 + L N + GFDV+ + +S I + + + + L+ + D + Sbjct: 61 SGLLKPLNYK-ENQELVGFDVEIGKEISKRIGLEANPVT---NPWETIIQGLRGNKYDAI 116 Query: 101 SRNTDWTLLREISLGLAFR-PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159 + T R S + F P FI + I +V L G +I V +T Sbjct: 117 IGSMTATEER--SKQVDFSIPYYVSGATVFISSENNDIKTVEDLKGKTIGVMQASTYVE- 173 Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 A F R DA D + + + + L + Sbjct: 174 -----DAKKYTDKIKEFPSEIYALQDLPPGRLDAVITDR--IVGISAMQESGLKIQALGE 226 Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLG 278 +I + +A AI + + ++ I ++ KD T ++ ++ G Sbjct: 227 VIKREEIAVAINKDNEVLLEAINKA----------------IEEMVKDGTYKEISMKWFG 270 Query: 279 ID 280 D Sbjct: 271 KD 272 >gi|257458171|ref|ZP_05623325.1| putative amino acid ABC transporter, amino acid-binding protein [Treponema vincentii ATCC 35580] gi|257444465|gb|EEV19554.1| putative amino acid ABC transporter, amino acid-binding protein [Treponema vincentii ATCC 35580] Length = 272 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 96/260 (36%), Gaps = 17/260 (6%) Query: 1 MYKDFFV-SILCLIILFFTSFSTNA-------SILGDIKKRGFLKCGINTGLVGFAEVKA 52 M K V + LC++ + F+S N ++ + L G++ + + Sbjct: 1 MKKRIAVYAALCILFMLFSSCRRNTKVEYIEDPSWSKVQVKSALVIGVSDFVPILSFRNE 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + G+D+D L + P + P+ ++ + L + ID ++ T R+ Sbjct: 61 KNEIVGYDIDIFTELCRRLGIHP---IFYPIQWAQKEILLNTGVIDCIASGFSVTEERKQ 117 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + + + + +G +++QL +I V+A T + L +A Sbjct: 118 HYRM--CTPYLQNAKIVVTLAGRGYQTLAQLQNRTIAVEADTAGDEALL-NVEALKDHVI 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++++ A + CDA D +Y+L + P ++ I+ + IS A Q Sbjct: 175 IKAMATIDQLYEALDSGTCDAIVVD--LIYSLDTLDKNP-QYSIINEAISTEYYTFAFRQ 231 Query: 233 GDTEWYNIVSWTHYAMVTAE 252 D + M E Sbjct: 232 TDASLVAKIESVLAEMNEDE 251 >gi|257459776|ref|ZP_05624885.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] gi|257443201|gb|EEV18335.1| bacterial extracellular solute-binding protein, family 3 [Campylobacter gracilis RM3268] Length = 268 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 83/222 (37%), Gaps = 10/222 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD-DPSKIQYLPL 83 L I++ G ++ G+ E G ++GF++D A++ IF KI+++PL Sbjct: 17 DSLDQIRQNGVIRIGVRDAHPPLCESNG-GKFEGFEIDLANAIAKEIFGKKEGKIEFIPL 75 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 + +R L++ ++D++ T R+ + F G + K + ++QL Sbjct: 76 SVNDRIPFLEANKLDLVIGLFSITNERKR--KIDFSLPYLSVNLGVLTRKADAFTDIAQL 133 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 I + T +A+ F + + +E R D Y D Sbjct: 134 HDKKIVFEGDAT----VAERFFKNKGFKNLGHCASAKECYEMIRNGDADGYINDNLI--V 187 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L + + V ++ + + + + E + V+ Sbjct: 188 LAYSVIDDTLEVPFKNLGPSDFIGIGVQKDNKELLDFVNAEL 229 >gi|116054041|ref|YP_788484.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|296386808|ref|ZP_06876307.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa PAb1] gi|313112073|ref|ZP_07797857.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] gi|115589262|gb|ABJ15277.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|310884359|gb|EFQ42953.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa 39016] Length = 256 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 34/239 (14%), Positives = 67/239 (28%), Gaps = 19/239 (7%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 L+++ + +A +L D+ +RG L+ + F + G GF+ + L++ Sbjct: 7 LLMLVSLAAPLAHAELLDDVHQRGALRIALEGTYPPFNFKQG-GKLTGFETELGELLAAE 65 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + P ++ LQS + DI R F I Sbjct: 66 LEVKPE---FVTTEWSGILAGLQSGKYDIALNQVSVNEQRRKV--FDFSEPYTISSAQLI 120 Query: 131 MHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + S+ L G + V GT + + E + Sbjct: 121 VRADDTRQFRSLEDLKGLKLGVGQGTNYADLAKSVA-----GVNVRTYPGAPEYLQDLAS 175 Query: 189 HRCDAYTGDISA--LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R DA D + + P P + + ++ ++ Sbjct: 176 KRIDAALNDRLLIPFAIREAKLPVKPGAAVGPVANMAIPY----RKNNPKFGEALNAAL 230 >gi|94987158|ref|YP_595091.1| amino acid ABC transporter periplasmic protein [Lawsonia intracellularis PHE/MN1-00] gi|94731407|emb|CAJ54770.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Lawsonia intracellularis PHE/MN1-00] Length = 260 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 85/245 (34%), Gaps = 16/245 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I L FF A KK ++ GI+ F+ + +GD GFD Sbjct: 5 MKYMLSLWINILFCFFFIVNPIYAE-----KKEHYIN-GIDAHYPPFSFIDEHGDPTGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ +++ + +++ P++ AL +K+ID++ + RE + F Sbjct: 59 VEALNWIANKLG---FTVEHRPISWDGIIPALLAKKIDMICSGMSISPEREK--NILFTR 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + I+HK ++ G +I VQ GT L K KY ++ Sbjct: 114 PYWITQKILIVHKDSKLTPEEIFYGENIIVGVQCGTNEATFLEKELKNKGYKYKLRYYDS 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R +A D + L I A+ + +T+ Sbjct: 174 SPLVIKDLLNGRINAAVMD---CLPVDNAIKHNKAIKKLYIIDYSDAFGVAVRKENTQLA 230 Query: 239 NIVSW 243 + Sbjct: 231 KRIED 235 >gi|52784240|ref|YP_090069.1| YckK [Bacillus licheniformis ATCC 14580] gi|163119224|ref|YP_077659.2| solute-binding family protein 3 YckK [Bacillus licheniformis ATCC 14580] gi|319648832|ref|ZP_08003043.1| YckK protein [Bacillus sp. BT1B_CT2] gi|52346742|gb|AAU39376.1| YckK [Bacillus licheniformis ATCC 14580] gi|145902730|gb|AAU22021.2| putative extracellular solute-binding protein, family 3 YckK [Bacillus licheniformis ATCC 14580] gi|317389251|gb|EFV70067.1| YckK protein [Bacillus sp. BT1B_CT2] Length = 268 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 74/263 (28%), Gaps = 26/263 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA-----------SILGDIKKRGFLKCGINTGLVGFAE 49 M K F +L L+I + + S+ IK +G L G F Sbjct: 1 MKKAIFAVLLTLLITVMAACGASGDNSKDKNAAGDSLWSSIKDKGVLTVGTEGTYEPFTF 60 Query: 50 VKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 G+DV+ + ++ + + F L SK+ D+++ Sbjct: 61 HDKKTDKLTGYDVEVMQEVAKRLNLKAE---FKETQWDSMFAGLNSKRFDVVANQVG--- 114 Query: 109 LREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 ++ F + + S + G Q+ T+ LA A Sbjct: 115 KKDREDQYDFSDSYTTSQAVVVTKADNNDVKSEGDVKGKK-AAQSLTSNYNDLAKNAGA- 172 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 E + + + R D D A+ T+ I + Sbjct: 173 ----EIEGVEGMAQAFQLIQQGRVDLTYNDKLAVLNYLKTSGN-KNLKIAFETGEPQTTH 227 Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250 A +G E + V+ M Sbjct: 228 FAFRKGSGELVDKVNSALKDMKE 250 >gi|322390126|ref|ZP_08063660.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus parasanguinis ATCC 903] gi|321143157|gb|EFX38601.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus parasanguinis ATCC 903] Length = 275 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 82/245 (33%), Gaps = 8/245 (3%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K S L L+ + TS S + ++ G F+ + +G G+++ Sbjct: 4 KKVIKYSALGLVAVLATSALVACSSGKSASGKKTIEVGTVGTTKPFSYEEKDGKLTGYEI 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + R + D ++ + F L S + I + N ++ RE + Sbjct: 64 EVLREIFK--GSDKYEVNFNKTEWSSVFAGLDSDRFQIGANNISYSKEREE--KYLYPNP 119 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER--V 179 + ++ K I S+ + G V GT+T L DY K H+ + + + Sbjct: 120 YARNPLVLVVPKDSSIKSLDDIGGKKTEVVQGTSTAKQLEDYNKKHSDNPTDLQYTDGTI 179 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEWY 238 + I A R D + + + ++ + P I + D + Sbjct: 180 QTIMANLADGRTDYKIFER-ISVDTIIRDQGYDNLKVIELPSDQQPYVYPIIAKEDKDLQ 238 Query: 239 NIVSW 243 V+ Sbjct: 239 KFVNK 243 >gi|222102716|ref|YP_002539755.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] gi|221739317|gb|ACM40050.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] Length = 261 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 37/271 (13%), Positives = 90/271 (33%), Gaps = 28/271 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGF 59 M K V + T S+ A ++ G+ F+ A+G W+G+ Sbjct: 1 MKKIAIVLSVIAATFGMTKPSSAAD--------DVIRFGVAAEPYAPFSVKDASGKWQGW 52 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D A+ + + +K + + + AL +K+ D++ + T R+ + F Sbjct: 53 EIDLMDAVCNQM---KAKCEIVDVAWDGIIPALLAKKFDVIWSSMSITDERKKV--IDFT 107 Query: 120 PITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 Y+ + K ++ G ++ Q+ + + F N + Sbjct: 108 DKYYYSPNVLVGAKADTRSFDVAKPETFKGITVAAQSSSLQATYMQQKF---NGMSDLKL 164 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAI 230 + +++ A +A R D + + + + + + + Sbjct: 165 YPTLDDEIADIQAGRVDLMAAAGIQIQDFLSKPE--GQAYEIKVTLPHETMFGYGDGGGL 222 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 + DT + ++ A+ + E K Sbjct: 223 RKEDTALKDKLNAALKAVRASGEYDAITKRY 253 >gi|120597748|ref|YP_962322.1| extracellular solute-binding protein [Shewanella sp. W3-18-1] gi|120557841|gb|ABM23768.1| extracellular solute-binding protein, family 3 [Shewanella sp. W3-18-1] Length = 244 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 73/225 (32%), Gaps = 18/225 (8%) Query: 31 KKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 K L G N F V + KGFD+D + ++ ++ + Sbjct: 23 KSDDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIDLAKQIAKDAGK---TLKVENMKFDSL 79 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147 +AL S +ID ++ T R+ + F Y Q +++K I ++ + G Sbjct: 80 IVALNSGKIDFIASGMTITAERQA--NVNFSDPYYEATQVVLVNKDNDSIHTLEDIKGKH 137 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 VQ GTT + + + F E + + D D Sbjct: 138 FAVQLGTTAD------IMSKKYTQNITAFNTGFEAIMELKNSKVDLVLFDSEPAANYLAK 191 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 N E ++ A+ + E ++ T A + A+ Sbjct: 192 NP---ELKMIKLDFPAEFYGFAVSKKQPELLASINKTL-ANMKAD 232 >gi|326333415|ref|ZP_08199661.1| amino acid ABC transporter, amino acid-binding/permease protein [Nocardioidaceae bacterium Broad-1] gi|325948811|gb|EGD40905.1| amino acid ABC transporter, amino acid-binding/permease protein [Nocardioidaceae bacterium Broad-1] Length = 263 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 82/261 (31%), Gaps = 18/261 (6%) Query: 1 MYKDFFVSILCL----IILFFTSFSTNASIL---GDIKKRGFLKCGINTGLVGFAEVKAN 53 M + L + + L + K L + F Sbjct: 1 MNLRKLAAALTVPALGLALAACGGGDEGGTSPSGAKLVKADTLTICTHLPYKPFEF-NEG 59 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ GFD+D + + A + + AL S + D+ + T RE Sbjct: 60 GEVVGFDIDVLKIAADAEKLETEVVNIGWET-IVSGEALNSGKCDVAAGAMTITEEREKV 118 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + Q + K G +S+ L+G +I VQ TT + + Sbjct: 119 M--DFTEPYFEATQALMTKKGAGYASLDDLAGKTIAVQEATTGADYVKENAPK---DAKI 173 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ- 232 I E + A ++ + DA D LY ++ I + + ++ + Sbjct: 174 ITLEDSALMMQAVKSGKADAGVNDNGLLYDFV---KENTDTEITSEFQTGEAYGFSVKKG 230 Query: 233 GDTEWYNIVSWTHYAMVTAEE 253 G+ + +++ +E Sbjct: 231 GNDKLLEVLNKGINDKAAYDE 251 >gi|326792536|ref|YP_004310357.1| ABC transporter periplasmic protein [Clostridium lentocellum DSM 5427] gi|326543300|gb|ADZ85159.1| ABC-type transporter, periplasmic subunit family 3 [Clostridium lentocellum DSM 5427] Length = 275 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 86/239 (35%), Gaps = 15/239 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T+ ++ + + G N F D GFDV+ +A+++ + + Sbjct: 40 TAEASPENSTEPTNSDNVIVMGTNAEFEPFEYRDGL-DIVGFDVEIAKAVANKLGKE--- 95 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG- 136 ++ + + L + ++D ++ T R + + F + Q I+ Sbjct: 96 LKIEDMAFDSLIMGLNNDKMDFIAAGMTATEER--AQQVDFSDSYFKSKQVIIVKADNTA 153 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I+S L G S+ VQ GTT D F + + ++ + + + DA Sbjct: 154 IASADDLVGKSVGVQLGTTG-----DLFVSGTEGVTVVQVKKGTQAVMDLQNGKVDAVVI 208 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D K ++ IL + A A+ +G+TE N ++ T + E Sbjct: 209 DE---EPAKKMIAGKTDVKILEVPFIEEEYAIAVKKGNTELLNTINETIEELKANGEYD 264 >gi|171317967|ref|ZP_02907141.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171096867|gb|EDT41741.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 267 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 86/254 (33%), Gaps = 22/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + L SF+ + + ++ GI+ F + +G GFD Sbjct: 1 MNRTAKLVVSALAFAPLVSFAQDTAT---------IRWGIDPTYPPFEAKQPDGSLAGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +K ++ AL++++ D++ T R + F Sbjct: 52 IDLRDAICEQL---RAKCVWVEQGFDGMIPALRARKFDVIMSAMTATDER--LKQIDFSN 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + + + + L+G + + GTT E + + ++ Sbjct: 107 KLYASPGALVAPAGSKLLPTAASLAGKRVGIDQGTTQEAYAKAEWATRG--VTIVSYQNQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +++ R DA D + L R + ++ + A + +GD Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTPRGKGYAFAGPDVTDVRITGYGVAMGVRKGD 224 Query: 235 TEWYNIVSWTHYAM 248 + ++ A+ Sbjct: 225 ADMKKRLNDAIAAI 238 >gi|239907738|ref|YP_002954479.1| amino acid ABC transporter substrate binding protein precursor [Desulfovibrio magneticus RS-1] gi|239797604|dbj|BAH76593.1| amino acid ABC transporter substrate binding protein precursor [Desulfovibrio magneticus RS-1] Length = 250 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 87/253 (34%), Gaps = 19/253 (7%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K F ++ L +L F + + GI+ G F V G G Sbjct: 1 MRKRFGLLLAALAAFVLCFGGLAQA--------EEKVYVNGIDFGFPPFGFVDKAGKPTG 52 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ ++ + K+++ P++ AL +K+IDI++ T R + + F Sbjct: 53 FDVESLDWIAKKMG---FKVKHQPMDWDGIIPALLAKKIDIIASGMSATAER--AQKVDF 107 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y Q ++ K+ L G I VQ GT T L + K+ + ++ Sbjct: 108 SIPYYEVTQVLVVGDKEATPFAEILKSGKKIGVQRGTVTAKLLEGFVGQPGYKFELVPYD 167 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R D + P + + A+ + D E+ Sbjct: 168 STDLSMEDVKIGRIAGSGMDSTIAA---EVMKAPGFKIAGTFDAAPEKYGYAMRKEDKEF 224 Query: 238 YNIVSWTHYAMVT 250 V+ ++ Sbjct: 225 QAKVNEGLKLLMA 237 >gi|268589604|ref|ZP_06123825.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Providencia rettgeri DSM 1131] gi|291315078|gb|EFE55531.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Providencia rettgeri DSM 1131] Length = 255 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 38/250 (15%), Positives = 84/250 (33%), Gaps = 17/250 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+K + + F + S G F + +GFD Sbjct: 1 MFKKLVFAGCMSLAAFAGNVYAKES----------YTVGAGGTYRPFEYENSQKQLEGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ A D ++ + + F L S DIL T R+ + F Sbjct: 51 IDIIKAIAEAEGFD---VKLVNTPWEGIFATLSSGDRDILISGITITDKRKNM--VDFSN 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q ++ + + ++ L ++ V +T ++ ++D + F+ Sbjct: 106 PYFPAEQAIVISETSDVKDLNSLKDLNVGVVNSSTGDIVVSDVIGKN--STAIKRFDNTP 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + DA GD+ + T+ +I + K A+ +G++E Sbjct: 164 LLLQELFEDGIDAAVGDVGVIKYYIKTHPEKKFKLIYDNHFEKQYFGIAVAKGNSELQQK 223 Query: 241 VSWTHYAMVT 250 ++ ++ Sbjct: 224 INNGLDKIIA 233 >gi|206576704|ref|YP_002239088.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Klebsiella pneumoniae 342] gi|288935991|ref|YP_003440050.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|290512797|ref|ZP_06552162.1| glutamine transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|206565762|gb|ACI07538.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Klebsiella pneumoniae 342] gi|288890700|gb|ADC59018.1| extracellular solute-binding protein family 3 [Klebsiella variicola At-22] gi|289774680|gb|EFD82683.1| glutamine transport system substrate-binding protein [Klebsiella sp. 1_1_55] Length = 250 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 82/248 (33%), Gaps = 25/248 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L + F + + + + G++T V F + + + GFD+D Sbjct: 7 KLKLTLALVICSASFVTAAQD-----------KITVGVDTAFVPFEFKQGD-KYVGFDID 54 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + + P++ LQS+ +D+ T R+ + F Sbjct: 55 LWDAIAKKM---HISYELRPMDFGGLIPGLQSRNLDVAMAGITITDARK--QVVDFSDGY 109 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y + I+ S L+G + ++ GT + +KA+ I F ++ Sbjct: 110 YNADLLIAVKSTDNSIAKFSDLTGKKVGLKQGTAAASFMKSKYKANY-----IEFPNIDN 164 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWYNI 240 +A DA D + T D I A+ + ++ Sbjct: 165 AYLDLQAGNLDAVVHDSPNVLYYVKTAGNGKVKSTGETDSILPQQYGFAMQK-NSSLTPK 223 Query: 241 VSWTHYAM 248 V+ A+ Sbjct: 224 VNQALQAL 231 >gi|149907745|ref|ZP_01896492.1| Arginine-binding periplasmic protein 1 precursor [Moritella sp. PE36] gi|149809415|gb|EDM69344.1| Arginine-binding periplasmic protein 1 precursor [Moritella sp. PE36] Length = 247 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 93/253 (36%), Gaps = 27/253 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L L TS + + IK F + AN +++GFD Sbjct: 1 MKK-------LLTALILTSAAAQVTAAEQIK------FVTEATYPPFEMMDANNEFQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D RA+ S + ++ + + +L+ ++ D D T R+ + F Sbjct: 48 IDIARAVCSEL---KAECSFANQSFDSLIPSLKFRRYDAAIAAMDVTPARKK--QVDFSD 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I Y + + K + V+ LSG ++ VQ GT+ + + + + + K + F + Sbjct: 103 IYYENSAVLVAEKG-KYNVVADLSGKAVGVQNGTSHQAYMTETYA--DEKVLLLNFPSYQ 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 + + R + D + + + + + ++ A A+ +G+ Sbjct: 160 KAFLDLKNGRINGVFADSAVAHDWLSKHS-GGNYETVGKAVTDEKYFGAGFAIAVRKGNA 218 Query: 236 EWYNIVSWTHYAM 248 E ++ A+ Sbjct: 219 ELLTKLNKGLQAI 231 >gi|317061042|ref|ZP_07925527.1| amino acid-binding protein [Fusobacterium sp. D12] gi|313686718|gb|EFS23553.1| amino acid-binding protein [Fusobacterium sp. D12] Length = 241 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 80/245 (32%), Gaps = 27/245 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +F + + ++ F+ L G N F + G GFD Sbjct: 6 MMK-YFGMFILMGMMSAVMFA------------KTLYVGTNAEFAPFEYL-EKGKITGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ AL+ + D I+ + ALQ K++D++ T R+ + F Sbjct: 52 IELMNALAKEMKMD---IKIENMAFDGLLPALQMKKVDVVIAGMTETPERKK--AVNFTK 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q I K K I +LSG + V G T + ++D A F+ Sbjct: 107 PYFKAKQVIITKKGKDIKDFQELSGKKVGVMLGFTGDAVVSDIKGAK-----VQRFDATY 161 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + DA D + + I + A A+ + D Sbjct: 162 SAVMALENGKVDAVVADSEPAKKYIASYK---DLSIASAKAEEEDYAIAVRKNDKVLLEN 218 Query: 241 VSWTH 245 ++ Sbjct: 219 LNKAM 223 >gi|311070993|ref|YP_003975916.1| putative ABC transporter binding lipoprotein [Bacillus atrophaeus 1942] gi|310871510|gb|ADP34985.1| putative ABC transporter binding lipoprotein [Bacillus atrophaeus 1942] Length = 287 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 36/260 (13%), Positives = 76/260 (29%), Gaps = 21/260 (8%) Query: 1 MY-----KDFFVSILCLIILFFTSFS----TNASI--LGDIKKRGFLKCGINTGLVGFAE 49 M K + + L T+ S ++ IK++G + + L + Sbjct: 1 MKSYTRSKAAVLILTLAFFLITTACSGKEEADSKTSDWDQIKEKGKIVVATSGTLYPTSY 60 Query: 50 VK---ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 + G++V+ R + + + +++ + A+ S QID + + D Sbjct: 61 HDTESGSDKLTGYEVEVIREAAKRLGVE---VEFKEMGIDGMLTAVNSGQIDAAANDIDV 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T RE + + GI ++ L G A T D + Sbjct: 118 TKDREKKFAFSAPYKYSYGTAIVRKDDLSGIHTLKDLKGKKAAGAATTVYM----DVARK 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 + + E+ R D D + + + Sbjct: 174 YGAEEVIYDNATNEQYLKDVANGRTDVILNDYYLQALALAAFPDLNITIHPDIKYMPNKQ 233 Query: 227 APAIIQGDTEWYNIVSWTHY 246 A + + +TE ++ T Sbjct: 234 ALVMKKSNTELQKKMNQTLK 253 >gi|322389670|ref|ZP_08063218.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 903] gi|321143669|gb|EFX39099.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 903] Length = 727 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 63/210 (30%), Gaps = 16/210 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L L + +A +K +T F ++ +KG D Sbjct: 1 MKKKLLACLLFLFPFVAFAGHAHAET---------IKVVFDTAYAPFEFKDSDQTYKGID 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ ++ D K A+Q+ Q D + T RE Sbjct: 52 VEILDKVAEINGWDLDK---SFPGFDAAVNAVQAGQADAIMAGMTKTTEREKV--FTMSD 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K I+ SQL G ++ V+ GT + L + K F+ + Sbjct: 107 TYYDTKVVIATTKADKITKYSQLKGKTVGVKNGTAAQRFLDKNKDKYGYK--IKTFDTGD 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + A DA D + Sbjct: 165 LMYNSLSAGAVDAVMDDQPVIQYAIQKGQD 194 Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 64/204 (31%), Gaps = 10/204 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 K+ ++ F + G D+D +A++ I+ Sbjct: 270 KKSKYVISSDSSFAPFVFQNGKNKYTGIDMDLIKAIAKD---QGFTIEINNPGFDAAVSD 326 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 +QS + T R+ + F Y + + I S L G ++ V+ Sbjct: 327 VQSGHAQGMIAGMTVTDARKET--FDFSEPYYTANSILAVQESSKIDSYDDLKGKTVGVK 384 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 GT+++ L + K + K F + + + A D + K + Sbjct: 385 NGTSSQNFLEENQKKYGYK--IKTFSDGASMYDSLNSGSVAAIMDDEPVI---KYAIKQG 439 Query: 212 SEHVILPDIISKSPLAPAIIQGDT 235 + + LA A+ +G+ Sbjct: 440 RKFKTPIEGTPSGQLAFAVKKGEN 463 >gi|258611866|ref|ZP_05711691.1| LOW QUALITY PROTEIN: amino acid ABC transporter [Listeria monocytogenes FSL R2-503] gi|258606739|gb|EEW19347.1| LOW QUALITY PROTEIN: amino acid ABC transporter [Listeria monocytogenes FSL R2-503] Length = 444 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 87/237 (36%), Gaps = 15/237 (6%) Query: 34 GFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 G L G++ + + GFDV ++ + K++ +N Sbjct: 1 GVLTVGLSADYPPYEFHQTIDGKDKVVGFDVSIAEKIAKDL---DVKLEIKEMNFDSLLG 57 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASI 148 +L++ +ID++ T R+ + F F Q ++ K K +SV+ SG + Sbjct: 58 SLKTGKIDMIISGMSPTPERQK--EVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKV 115 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 Q TT E + + + ++V ++ ++++ DA + A + Sbjct: 116 GAQKQTTQEELAQNEL----VGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQD 171 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 + I SK A A+ +G T V+ + + L QK N++ Sbjct: 172 KTLAMADIKFANGSKE-TAIAMPKGSTALQEKVNVSIKDIQDTGLLKKYQKEANKLM 227 >gi|294783189|ref|ZP_06748513.1| CjaC protein [Fusobacterium sp. 1_1_41FAA] gi|294480067|gb|EFG27844.1| CjaC protein [Fusobacterium sp. 1_1_41FAA] Length = 242 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 86/256 (33%), Gaps = 23/256 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + ++ L+ + + + K + G N F + GFD Sbjct: 1 MKKIFKLILMSLLSVVISVSAFA--------KNKVVYVGTNAEFAPFEYL-EKNKVVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+S + + + ALQ+K++D++ T R+ +AF Sbjct: 52 IDLLDAISKETG---LEFKVQDMAFDGLLPALQTKKVDMVIAGMSATPERKK--AVAFSK 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q I + S LSG + V G T + +++ F Sbjct: 107 PYFKAKQVVITKGVDKSLKSFKDLSGKKVGVMLGFTGDTVVSEI-----KGVKVERFSAS 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A ++ DA D A K T + + VI + A A+ + D E + Sbjct: 162 YAAIMALSQNKVDAVVLDSE--PAKKYTANN-KQFVIASIPAEEEDYAIAVRKNDKELLD 218 Query: 240 IVSWTHYAMVTAEELG 255 ++ + E Sbjct: 219 KINAALDKIKANGEYD 234 >gi|170697857|ref|ZP_02888942.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170137244|gb|EDT05487.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 267 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 87/254 (34%), Gaps = 22/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + L SF+ + + ++ GI+ F + +G GFD Sbjct: 1 MNRTAKLVVSALAFAPLVSFAQDTAT---------IRWGIDPTYPPFEAKQPDGSLAGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +K ++ AL++++ D++ T R + F Sbjct: 52 IDLRDAICEQL---RAKCAWVEQGFDGMIPALRARKFDVIMSAMTATDER--LKQIDFSN 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + + + + L+G + + GTT E + + ++ Sbjct: 107 KLYASPGALVAPAGSKLLPTAASLAGKRVGIDQGTTQEAYAKAEWATKG--VTIVSYQNQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +++ R DA D + L R + + ++ + A + +GD Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTPRGKGYAVAGPDVTDVRITGYGVAMGVRKGD 224 Query: 235 TEWYNIVSWTHYAM 248 + ++ A+ Sbjct: 225 ADMKKRLNDAIAAI 238 >gi|170767445|ref|ZP_02901898.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia albertii TW07627] gi|170123779|gb|EDS92710.1| histidine ABC transporter, periplasmic histidine-binding protein [Escherichia albertii TW07627] Length = 260 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 86/244 (35%), Gaps = 20/244 (8%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ G + F + G+ GFD+D + L I ++ ++ +L++K Sbjct: 28 IRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRI---NTQCTFVENPLDALIPSLKAK 84 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGT 154 +ID + + T R +AF Y ++ K L G + V GT Sbjct: 85 KIDAIMSSLSITEKR--QQEIAFTDKLYAADSRLVVAKNSDTQPTVDSLKGKRVGVLQGT 142 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T E +Y+ + + ++ + I + A R DA D A L ++ Sbjct: 143 TQETFGNEYWAPKGI--EIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDY 200 Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + L + + D E ++ +A + A+ +++K Sbjct: 201 KFGGPSVKDEKLFGVGTDMGLRKDDNELREALNKA-FAEMRAD------GTYEKLAKKYF 253 Query: 270 NPDV 273 + DV Sbjct: 254 DFDV 257 >gi|167564916|ref|ZP_02357832.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia oklahomensis EO147] Length = 260 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 75/221 (33%), Gaps = 13/221 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K ++ G++ F +G GFDVD + + +K ++ + Sbjct: 23 KDWSTIRFGVDASYPPFESKGPDGKVVGFDVDLGNEICKRV---KAKCVWIENDFDGMIP 79 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASIC 149 AL++++ D + + T RE + F + + K + + L G ++ Sbjct: 80 ALKARKFDGVLSSMSMTPQREEQIA--FSSKLFNTPTRLVTKKGANLMPTADSLKGKTVG 137 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ GT E Y+ +K P ++ +++ A A R DA D L Sbjct: 138 VEQGTIQETYAKTYWAPKGVKVQP--YQNQDQVYADLLAGRLDAALQDAVQADIGFLKTP 195 Query: 210 RPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 R + + + + DT+ + Sbjct: 196 RGKDFAFAGSDLDDPKTLGEGAGIGLRKEDTDLKAKIDKAI 236 >gi|319780065|ref|YP_004139541.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317165953|gb|ADV09491.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 266 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 47/227 (20%), Positives = 83/227 (36%), Gaps = 16/227 (7%) Query: 30 IKKRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 + K +K G+ F A+G W G+++DF A+ + D P+ Sbjct: 21 VAKADPVKIGVAAEPYPPFTSPDASGKWIGWEIDFIDAVCAEEKLD---CVITPVAWDGI 77 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS-VSQLSGAS 147 AL +K+ID++ + T R + + F Y I K + S L G Sbjct: 78 IPALTTKKIDLIVSSMSITAERAKT--IDFSDKYYNTPTAIIGPKDQKFGSAPDDLKGKI 135 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + VQ T + +F + ++ +E + A R DA D S L Sbjct: 136 VGVQVSTVHAVYAKKHFGSA--ASEIKEYQTQDEANNDLAAGRLDAVQAD-SIALGEFLK 192 Query: 208 NDRPSE-----HVILPDIISKSP-LAPAIIQGDTEWYNIVSWTHYAM 248 +D+ ++ PD P + + + DTE ++ A+ Sbjct: 193 SDQGKACCDLKGMVAPDDEVLGPGVGAGVRKEDTELKGKINAGIKAI 239 >gi|292488873|ref|YP_003531760.1| histidine ABC transporter periplasmic protein [Erwinia amylovora CFBP1430] gi|291554307|emb|CBA21659.1| Histidine ABC transport system, periplasmic component [Erwinia amylovora CFBP1430] Length = 249 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 73/221 (33%), Gaps = 13/221 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 L+ G + F A G GFD+D + + +K ++ + +L+ Sbjct: 15 KTLRIGTDPTYAPFEMKNAEGQLTGFDIDLANEICQRM---ETKCTFVESDFDALIPSLK 71 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152 +K++D + + T R +AF Y I K I +++ L G +I + Sbjct: 72 AKKVDAIISSLSITAKR--QQEIAFSAKLYAANSRLIAPKGSKIQPTLASLKGKTIGLLQ 129 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GTT E ++ + P + + + A R DA D A L Sbjct: 130 GTTQETYANQNWRPQGVTVTP--YANQDLVYQDLTAGRIDAAFQDEVAASEGFLKQPVGK 187 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAM 248 ++ I + + + + + M Sbjct: 188 DYAFAGPAIKDEKIFGVGTGIGLSKDNPALKAAIDKAFDDM 228 >gi|254506025|ref|ZP_05118170.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus 16] gi|219551248|gb|EED28228.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus 16] Length = 278 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 81/252 (32%), Gaps = 17/252 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 K F +I L+ L S + + I +RG L+ G++T V +A G+ GF Sbjct: 10 KKSFKRAITALLGLAIALPSMASDTPNINKINERGTLRVGMST-FVPWAMRNTQGELIGF 68 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D + L++ ++++P AL +++ D++ T R S + F Sbjct: 69 EIDVAKRLAADSGWK---VEFVPTAWDGIIPALLAQKFDVIIGGMSVTPER--SKSVLFS 123 Query: 120 PITYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 G + + S I + G T + F + Sbjct: 124 TPYSHSGVQVAANTELAAGFSEFSDFDSRRVKIAARRGAFTVQVARETFPKAK----ILQ 179 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + A + + + + +SK A A+ G+ Sbjct: 180 FDDDAQAFQEVLNGNAHAVIASSPKPEHEAVKHADKL-FIPFSERLSKGNEAFAVRLGEE 238 Query: 236 EWYNIVSWTHYA 247 + A Sbjct: 239 DKKAFFDEWINA 250 >gi|170732174|ref|YP_001764121.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|254246173|ref|ZP_04939494.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] gi|124870949|gb|EAY62665.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] gi|169815416|gb|ACA89999.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 259 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 79/220 (35%), Gaps = 13/220 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ GI F +G +GFDVD A+ + + K ++ ALQ+ Sbjct: 26 TLRFGIEAAYPPFESKTPSGQLQGFDVDVGNAVCAKL---NMKCVWVENAFDGLIPALQA 82 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153 ++ D ++ + T R+ + F P Y + + + V+ L G + V G Sbjct: 83 RKFDAINSAMNITAKRK--QSIDFTPPIYVVPIVMVAKRGSPLKPDVASLRGKHVGVLQG 140 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 ++ E L ++ + + ++ ++I A A R DA + L + Sbjct: 141 SSQEDFLKAHWANAGVA--VVSYQDQDQIYADLVAGRLDAAVQEAQTAQDGFLDKPAGRD 198 Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248 + I+ + + + + D + A+ Sbjct: 199 YQIVGEPLKDPATLGEGTGFGLRKNDKALQAKIVGALDAL 238 >gi|296162053|ref|ZP_06844851.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295887674|gb|EFG67494.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 255 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 88/246 (35%), Gaps = 19/246 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + + + +F+ +++ L+ GI+ +G +KGFDVD Sbjct: 2 KISLMILSAALAFSSGAFAADSTT---------LRLGIDPTYPPMDSKAPDGSFKGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + I ++ Q++ L ALQ+++ID + + T RE + F Sbjct: 53 LGNEICKRI---HARCQWVELEFSGMIPALQARKIDAILSSMAITEKRE--QQILFSSKL 107 Query: 123 YFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + I + ++ ++ L G I VQ+GT E + H + ++ EE Sbjct: 108 FQFKSRLIARQGSALAGGLNALPGKQIGVQSGTQFEGYALKNWAPLG--VHVVAYKSQEE 165 Query: 182 IDAAYRAHRCDA--YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A R D + L+ + V P + + + + +T Sbjct: 166 VFADLENGRLDGALLGSVEADYGFLRTQAGKGFAFVGEPLSMGDRGVGIGLRKDETAVQA 225 Query: 240 IVSWTH 245 ++ Sbjct: 226 SINEAI 231 >gi|296135304|ref|YP_003642546.1| extracellular solute-binding protein family 3 [Thiomonas intermedia K12] gi|295795426|gb|ADG30216.1| extracellular solute-binding protein family 3 [Thiomonas intermedia K12] Length = 288 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 87/258 (33%), Gaps = 17/258 (6%) Query: 6 FVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDF 63 + L +F S S L K++G L + + +G G DVD Sbjct: 17 LAGSVALCAVFCASASATPIALPQKYKEQGHLTIAADATYAPMEFIAKDGKTVVGADVDL 76 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 +A++ + ++ + ALQS + D+ + T RE + F Sbjct: 77 GKAIAKKLGVKAD---FINASFDSIIPALQSGKYDMSMSSFTITKKREEV--VDFV-SYM 130 Query: 124 FDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLA----DYFKAHNMKYHPIVFE 177 G F + K ++ ++ L G S+ V+ GT A + A VF Sbjct: 131 TAGTSFYVKAKGGPKVNGLADLCGMSVAVEKGTVQSADAAKQSQECVAAGKKAVTVSVFP 190 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + A + R S + A + R + + + + +P AI + ++ Sbjct: 191 DQNGANLAIVSGRAQ-VGMADSPVAAWIVEESRG-QFKLTGESYNSAPYGIAIPK-NSGL 247 Query: 238 YNIVSWTHYAMVTAEELG 255 V ++ + E Sbjct: 248 AEPVLQALKEVIASGEYA 265 >gi|238751796|ref|ZP_04613283.1| Arginine-binding periplasmic protein 2 [Yersinia rohdei ATCC 43380] gi|238709925|gb|EEQ02156.1| Arginine-binding periplasmic protein 2 [Yersinia rohdei ATCC 43380] Length = 231 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 74/216 (34%), Gaps = 12/216 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ + F + AN + GFD+D +AL + + + AL+ Sbjct: 10 TIRFAASATYPPFESMDANNEIVGFDMDLAKALCKQM---EANCTFTNQAFDSLIPALKF 66 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K+ D + D T R + F Y + I K SS + L G I ++ GT Sbjct: 67 KRYDAVISGMDITPERSKQVA--FTQPYYANSAIVIAPKG-KFSSFADLKGKKIGMENGT 123 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE- 213 T + L D + ++ + + R D GD + + TN + Sbjct: 124 THQKYLQDTHPE----IKTVAYDSYQNAIIDLKNGRIDGVFGDTAVVNEWLKTNPNLATV 179 Query: 214 -HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + + L A+ +T ++ A+ Sbjct: 180 GEHVTDPQYFGTGLGIAVRPENTALLEKLNKAIDAV 215 >gi|91779033|ref|YP_554241.1| polar amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91691693|gb|ABE34891.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 289 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 87/256 (33%), Gaps = 14/256 (5%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 L+ S + +A+ +IK RG+L F V A+G G+D D Sbjct: 22 LRTCAFALVAAIGVSHAAHAASAEEIKARGYLSVATEDDYTPFEFV-ADGKNTGYDNDLL 80 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + I D I+ + + + + D+ T R+ + F T Sbjct: 81 ALVRKKIGVD---IKQQVMPWSGILPGVTTGKYDMALTAVLVTDERKKT--FDFASPTCE 135 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK------YHPIVFER 178 + + K I S L G + + G+ L + + K + ++ Sbjct: 136 AVTFYAVKKGSTIKSPDDLVGKVVGAETGSAMLADLKLFNEELKKKHGGNGLKQIVEYQS 195 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E R DA +L +L RP V+ I + +A A+ +G+++ Sbjct: 196 YPEAYQDLGLGRVDAVANTQISLNSL--VKTRPDTFVVGQAIGKPTYIAWAVKKGNSDVL 253 Query: 239 NIVSWTHYAMVTAEEL 254 +V + + E+ Sbjct: 254 KMVDAALLELRKSGEM 269 >gi|115351121|ref|YP_772960.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115281109|gb|ABI86626.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 264 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 74/221 (33%), Gaps = 13/221 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F +G GFD+D A+ + + K ++ + ALQ Sbjct: 30 KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCAKL---KVKCVWVENDFDGLIPALQ 86 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152 +++ D ++ + T R+ +AF Y I + G+ + L G + V Sbjct: 87 ARKFDAINSDMTITDQRK--HAIAFTDPIYTIPNQLIAKQGSGLQPTPQALKGKRVGVLQ 144 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT E + + ++ + A ++ R DA D A L+ + Sbjct: 145 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGSKGFLSKPQGQ 202 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAM 248 ++ + + + + D + + Sbjct: 203 GFGFAGGTVADADILGSGVGFGLRKNDAALKTALDQALKGL 243 >gi|291530188|emb|CBK95773.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Eubacterium siraeum 70/3] Length = 281 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 79/251 (31%), Gaps = 20/251 (7%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K IL ++ G L G + + N D G Sbjct: 24 MKIKRIIAGILVAATCGLAMAGCQSNT-----TGGKLIMATEPGFAPYEYMSGN-DVVGI 77 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD ++ + +++ ++ LA+Q ++D + T R + F Sbjct: 78 DVDIANEVAKELG---MELEIQSMDFDGALLAVQQGKVDFAAAGISVTPER--QEAMDFS 132 Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Q ++ K + S L G + +T +AD + ++K P + + Sbjct: 133 IEYAKSKQVIVVLKGANRVKSADDLGGDTKIAVQMST----VADTYVTDDLKKEPSRYTK 188 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + ++ + D D K IL + A A +G+TE Sbjct: 189 YVQAAEDLKSDKVDCIVMDE---LPAKEMVKGNDNLEILDGEVFTDKYAFAFKKGNTELE 245 Query: 239 NIVSWTHYAMV 249 V+ ++ Sbjct: 246 EKVNKVLQKLI 256 >gi|260461851|ref|ZP_05810097.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|319785376|ref|YP_004144852.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|259032492|gb|EEW33757.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|317171264|gb|ADV14802.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 284 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 85/249 (34%), Gaps = 14/249 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 + ++ + A S L I KRG L G + A G + Sbjct: 3 RRSMLSAMGATAAASLVAKGAKAEEVTSTLDAIMKRGHLLAGARYDYPPGSFADAQGVVQ 62 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+ D R + + ++++ ++ R L + QID T + +RE + Sbjct: 63 GYGPDVAREFGKHLGVE---VKFVQTTSQTRIPLLLNGQIDAEFGPTTNSKIREEV--VD 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F I + ++ K + + +G + A T Y++A N +F+ Sbjct: 118 FSLIWNTEQAVILVRKGEP-TDPKAYAGTEKTIGA--TQGAVYIGYWRATNAGAKFKLFQ 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + E+ A + D D + + + + + A + Q D++W Sbjct: 175 QYPELLLAVAQGQVDCVLIDSLQAELMIEKMSDAK--LAVGEPFYRDSSAIMVRQNDSKW 232 Query: 238 YNIVSWTHY 246 N V+W Sbjct: 233 RNWVNWGLQ 241 >gi|213965170|ref|ZP_03393368.1| bacterial extracellular solute-binding protein, family 3 [Corynebacterium amycolatum SK46] gi|213952284|gb|EEB63668.1| bacterial extracellular solute-binding protein, family 3 [Corynebacterium amycolatum SK46] Length = 359 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 89/218 (40%), Gaps = 10/218 (4%) Query: 29 DIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +I +RG + G++ L + + G+ GF+V + ++ IFD+P +++ +++ E Sbjct: 96 EIYQRGRIIVGVDQSLNLLSFRDFSTGELSGFEVSLAQEIARDIFDNPDAVEFRFVDSNE 155 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R AL+ +D++ R T R + F G ++ G +S + Sbjct: 156 RTAALEDGTVDVVLRTMTVTDAR--RERVLFSAPYLTARAGVLVSSPGGDASPEDVEDGR 213 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 ICV G+TTE D + + ++ + + + + + D + L + Sbjct: 214 ICVSRGSTTE----DLIRRLSPNNTLLLVGNWSDCLISLQNSQAEIVVADDTILAGINDQ 269 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + I+ +++ A + +G+ ++ T Sbjct: 270 DP---ATAIVQRGLNEESYAAGVSKGNPGLVRQINATL 304 >gi|241206847|ref|YP_002977943.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860737|gb|ACS58404.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 257 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 64/224 (28%), Gaps = 13/224 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 L IK G K G F +G GFDV+ A+++ + ++ Sbjct: 23 AGENLAAIKSAGVFKIGTEGTYAPFTYHDESGKLVGFDVEIGEAIAAKLGVKAE---FVE 79 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVS 141 L +K+ D + T R+ F I I S + Sbjct: 80 GKWDGLIAGLDAKRYDTVINQVGITETRK--QKYDFSEPYIASKAVLIARDSDDSIKSFA 137 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G Q+ T+ LA A + + ++ R DA D + Sbjct: 138 DLKGKKSA-QSLTSNFGKLATEAGA-----ELVGTDGFDQSIQLVLTKRADATINDSLSF 191 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 K I+ + + I + + E ++ Sbjct: 192 LDFKKHKPDAPV-KIVAEQENADYSGVIIRKNEPELLAEINKAL 234 >gi|150395402|ref|YP_001325869.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150026917|gb|ABR59034.1| extracellular solute-binding protein family 3 [Sinorhizobium medicae WSM419] Length = 260 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 85/220 (38%), Gaps = 14/220 (6%) Query: 36 LKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 +K GI F A+G+W+G++++F +A+ + D P+ AL S Sbjct: 27 VKVGIAAEPYPPFTSPDASGNWQGWEIEFMKAMCAEAKLD---CVVTPVAWDGIIPALTS 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153 K+ID++ + T R+ + + F Y G I K I + L+G +I VQ Sbjct: 84 KKIDMIIGSLSITAERQKT--IDFSDKYYNTPTGIIGAKGDDITPTPEGLAGKTIGVQVS 141 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 T + +F ++ +E + A R DA D AL A ++ Sbjct: 142 TVHQAYAMKHFAPAG--VEVKEYQTQDEANQDLAAGRVDAVQADAIALDAFLESDQGKQC 199 Query: 214 HVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHYAM 248 ++ + + +G+TE ++ A+ Sbjct: 200 CDYKGEVAEDVDVIGPGVGVGLRKGETELKEKINAAIKAI 239 >gi|218437188|ref|YP_002375517.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] gi|218169916|gb|ACK68649.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7424] Length = 261 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 90/235 (38%), Gaps = 11/235 (4%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 L +I +RG L GI + GD +GF++D + L+ I P + P+N Sbjct: 32 LDEIMRRGKLIVGIKDNVKPLGFKNEQGDLQGFEIDIAQRLAQEILGSPDALVLRPVNNL 91 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 ER + +DI T R + Y DG G + S+S ++ A Sbjct: 92 ERLEVVIEGTVDITIARVTITPSRSRV--VDMSHYYYLDGTGLVTKNPSM-RSLSDVTSA 148 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 I + ++T + + I +E ++ D + D S L Sbjct: 149 RIALLKNSSTIVAIKSELP----NAQLIGVNSYQEALTLLETNQADVFAADNSILAGWVQ 204 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261 ++ +LP +S + L+ + +G ++ ++ + + A+ +E G Q+ Sbjct: 205 DYP---QYRLLPVRLSGAALSIVMPKGL-QYKSLHNRVNEAIARWQESGWLQERA 255 >gi|167840986|ref|ZP_02467670.1| glutamine ABC transporter periplasmic protein [Burkholderia thailandensis MSMB43] Length = 250 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 94/283 (33%), Gaps = 39/283 (13%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + F +++ + ++ + S +A L G +T + F + + + GFD+ Sbjct: 3 RRSFIKTVVAVALVGASLASAHA---------KELVVGTDTSFMPFEFKQGD-KYVGFDL 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D ++ + P++ ALQ++ ID+ R + F Sbjct: 53 DLWAEIAKDAGW---TYKIQPMDFAGLIPALQTQNIDVALSGMTIKEERRK--AIDFSDP 107 Query: 122 TYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + I S+ L+G I + GT T D+ KAH F ++ Sbjct: 108 YYDSGLAAMVQANDTMIRSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A R DA + + N+ + +S +G Sbjct: 164 QAYLALEAGRVDA-AMHDTPNVLFFVNNEGKGRVKVAGAPVSGDKYGIGFPKGSP----- 217 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKS 282 A V AE + ++ D + +++ G + Sbjct: 218 ----LVAKVNAE--------LAKMKADGRYAKIYKKWFGSEPP 248 >gi|29832942|ref|NP_827576.1| ABC transporter substrate-binding protein [Streptomyces avermitilis MA-4680] gi|29610063|dbj|BAC74111.1| putative polar amino acid ABC transporter substrate-binding protein [Streptomyces avermitilis MA-4680] Length = 282 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 87/253 (34%), Gaps = 20/253 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNAS----ILGDI--KKRGFLKCGINTGLVGF-AEVKANGD 55 + + +L S++ + + K G + + F +E+ G Sbjct: 10 RILAATTATAGLLLVAGCSSDNGGGKTTVKGVPLVKAGQITTCTHLPYPPFQSEID--GK 67 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +GFDV ++ + + + P + L S Q D+ + T R+ Sbjct: 68 VQGFDVSLIDLVAKDLGVKQAIVD-TPFENFKTGAFLNSGQCDVAAAGMTITEERKK--N 124 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + Q ++ KK G+ S++ + G + QA TT E A + + Sbjct: 125 VDFSDPYFEATQAVLVDKKSGVDSLADVKAKGKKLGAQAQTTGEEY------AKSKGFDA 178 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + FE + + R + A D + ++ ++ + + +G Sbjct: 179 VSFESSDAVLNGLRTGQVQAVIIDYPVVQGWLKDKANADAFKVVDNLNTGEEYGFTVKKG 238 Query: 234 DTEWYNIVSWTHY 246 +T+ ++ T Sbjct: 239 NTKLLAEINKTIK 251 >gi|322805501|emb|CBZ03065.1| amino acid ABC transporter, periplasmic amino acid-binding portion [Clostridium botulinum H04402 065] Length = 262 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 73/245 (29%), Gaps = 9/245 (3%) Query: 10 LCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRAL 67 + L++ + + A +IK+ +K G + F + + +GF++D + Sbjct: 1 MSLVVALGVALTACAQKNKEIKENKNTIKIGTSGQYYPFTFIDKDSNKVQGFEIDIWEEI 60 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 P + + L + +ID ++ T + F + G Sbjct: 61 GKRTGYKPE---FKVADWTGIMGMLDTGKIDTVANEITVTD--KKKEKYYFSKPYVYSGV 115 Query: 128 GFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEIDAA 185 K I S+ L G ++ Q GT ++ DY + + + Sbjct: 116 QLATKKGNNNIKSLKDLEGKTVATQVGTNYSKSIEDYNNKNKGEDIKTKQYNSFSGMFQD 175 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R DA D A + + P ++ + E ++ Sbjct: 176 VDLGRVDALIEDKLACLVNIKKSGLNLQLAGEPIEEMENAYPFVKKDENKEKIEKINKAL 235 Query: 246 YAMVT 250 M Sbjct: 236 DDMKN 240 >gi|270158881|ref|ZP_06187538.1| amino acid ABC transporter periplasmic amino acid binding protein [Legionella longbeachae D-4968] gi|289166334|ref|YP_003456472.1| glutamine-binding periplasmic protein precursor [Legionella longbeachae NSW150] gi|269990906|gb|EEZ97160.1| amino acid ABC transporter periplasmic amino acid binding protein [Legionella longbeachae D-4968] gi|288859507|emb|CBJ13468.1| putative glutamine-binding periplasmic protein precursor [Legionella longbeachae NSW150] Length = 243 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 18/197 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L + S KK +L + F G+ KGFD Sbjct: 1 MDKLINLVFIVFCFLLCSCESN--------KKEQYLHFATSAVYPPFEYS-ERGEIKGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + + + + A+ S Q DI T R+ F Sbjct: 52 IDLAKLIAKELGKEA---VFDNMQFSTVLPAISSGQDDIAIATITITEARK--NNFDFSE 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 YFDG + + + S +QL G + VQ G+ E+ L + F V + Sbjct: 107 PYYFDGIASVYRSNQPVMSQNQLKGKKVAVQLGSIMEIWLRETFP----DIEITVLDNNN 162 Query: 181 EIDAAYRAHRCDAYTGD 197 + + + R D D Sbjct: 163 QAVESLISGRVDVVLMD 179 >gi|257455731|ref|ZP_05620959.1| extracellular solute-binding protein, family 3 [Enhydrobacter aerosaccus SK60] gi|257446859|gb|EEV21874.1| extracellular solute-binding protein, family 3 [Enhydrobacter aerosaccus SK60] Length = 306 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 75/204 (36%), Gaps = 11/204 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ F+ KA+G GFDVDF RAL + + + + P + L Sbjct: 54 KTIRIATEGTYKPFSITKADGSLTGFDVDFIRALCAEM---KANCEIKPQDWDGLLPGLM 110 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQ 151 +K+ D++ T R+ + F + + F+ + I+ +Q+ ++ Q Sbjct: 111 AKKYDVVIDAMSITPERQA--QVDFTDPYFTNTLVFLTKQGSPINPDDPAQIDSHTVAAQ 168 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 T + + + ++ K ++E ++ A R D D + T + Sbjct: 169 RSTLS----TQWMEKNHPKAQLNLYEGLDNAFMDLAAGRSDLMISDKAPAAYWLTTPEGK 224 Query: 212 SEHVILPDIISKSPLAPAIIQGDT 235 + +I + + +GD Sbjct: 225 GFEIKGKEIDVNDKMGIIVRKGDP 248 >gi|300309582|ref|YP_003773674.1| amino acid ABC transporter/signal transduction system periplasmic binding protein [Herbaspirillum seropedicae SmR1] gi|300072367|gb|ADJ61766.1| ABC-type amino acid transport/signal transduction systems, periplasmic binding protein [Herbaspirillum seropedicae SmR1] Length = 269 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 71/233 (30%), Gaps = 10/233 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L I L+ I+ + ++ G DV+ + ++ + + Sbjct: 27 QADQLDTILAAKKLRVAIDLAVPPYSMKDDKLRLIGSDVETAQRMAKDFGLELEVVP--- 83 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 R LQ+ + DI+ T R + F + I+S + Sbjct: 84 TTLTNRVPYLQTNKADIVISAFSITPERAKV--IDFSVPYAPILVVVGAPRSMKITSPAD 141 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G I GTT + L + F+ A + + D + L Sbjct: 142 LAGKKIIATRGTTNDQELTKIAPS---SATITRFDDDATSMTAMVSGQADIWATSPMLL- 197 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + PS + + + LA + +G+ + ++ EL Sbjct: 198 -KVVNQKNPSRDIESKLTLKANLLAVGLRKGEPRLKEKIDGWIRTNLSNGELN 249 >gi|227505030|ref|ZP_03935079.1| extracellular solute-binding protein [Corynebacterium striatum ATCC 6940] gi|227198394|gb|EEI78442.1| extracellular solute-binding protein [Corynebacterium striatum ATCC 6940] Length = 301 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 87/277 (31%), Gaps = 32/277 (11%) Query: 1 MYKDFFVS---ILCLIILFFTSFSTNASI--------LGDIKK--------RGFLKCGIN 41 MYK S + C ++ + +S L + + G L G N Sbjct: 10 MYKKIAASGGLLACAMLAAGCVTNVESSTPDGWEEPHLDKVPEIAALYDDADGVLTAGTN 69 Query: 42 TGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 F ++G G ++D +A++ + + ++ + A+QS QIDI + Sbjct: 70 PPFAPFEFKDSDGAIVGVEMDMMKAIADILGLEFQPVE---QDFSMILPAVQSGQIDIGA 126 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL-TL 160 R F Y Q S G ++ VQ T +E + Sbjct: 127 SGFTDNEERRK--NFDFIDHLYAGIQWAERTDGIKRVDPSNPCGLTVAVQRTTVSETDDV 184 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA--LYALKLTNDRPSEHVILP 218 A + ++ + A R DA + D + ++ Sbjct: 185 IPKKDACGGDLRILSYDTSDNAALAVIMGRADAMSADSPVSSWAVNRSDGK----MRMVG 240 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D+ +P A+ + D++ V+ ++ E Sbjct: 241 DMFDAAPYGFAVPK-DSKLGPAVAAALNHLIETGEYQ 276 >gi|126444872|ref|YP_001063871.1| amino acid ABC transporter periplasmic protein [Burkholderia pseudomallei 668] gi|126224363|gb|ABN87868.1| ABC-type amino acid transport/signal transduction system, domain protein [Burkholderia pseudomallei 668] Length = 240 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 75/219 (34%), Gaps = 6/219 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSKI 78 +A L I + V F + GF D A+ + +I Sbjct: 15 HAQTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVVDDVRKKLKMPGLQI 74 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Y+P+ + R L + D+ +T T R ++F ++ G ++ K I Sbjct: 75 AYIPVTGQNRNPLLVNDTYDLEGGSTTNTAAR--GQDVSFSISLFYAGTRVLVKKASRIR 132 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G ++ AG+T+E + Y H++ + + + R D Sbjct: 133 GYADLAGKTVATAAGSTSENVIRKYAADHHLDIDVVPAKDYAAGPRMVESDRTAVLALDD 192 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 L+ ++ P + D + P + +GD Sbjct: 193 VLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDPAS 231 >gi|323465692|gb|ADX69379.1| Glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus helveticus H10] Length = 494 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 37/264 (14%), Positives = 86/264 (32%), Gaps = 29/264 (10%) Query: 1 MYK----DFFVSILCLIILFF-----TSFS----TNASILGDIKKRGFLKCGINTGLVGF 47 M K + F+ + +I F + + + S++ IK+ L G + Sbjct: 1 MKKAKIVNLFLVFITIISTLFLFNQPVAAADKKVASDSVMKKIKQTKELVVGTSADYPPL 60 Query: 48 AE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 V N + G D++ + ++ + +K+ ++ +AL++ ++D++ Sbjct: 61 EFTTSVNGNTKYVGVDIELAKDIAKDL---HAKLVIKNMSFDSLLVALETGKVDMVISAM 117 Query: 105 DWTLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 R+ + F I Y + + +G ++ Q G+ + Sbjct: 118 TPNPERKK--SVDFSQIYYKPSGEYFLINKRDQTKYKKIKDFAGQTVGAQTGSIQYQLIQ 175 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 K K ++ + A ++ + + ND V Sbjct: 176 SQMKKSKAKG----LGKINNLVLALKSGKMSGVVMEE-LTAKAYAKNDNSLMAVRSDLRE 230 Query: 222 SKSPLAPAIIQGDTEWYNIVSWTH 245 ++ A AI +G V+ T Sbjct: 231 EQAGNAVAIAKGQPGLVKAVNKTI 254 >gi|300690981|ref|YP_003751976.1| glutamine transporter subunit ; periplasmic binding component of ABC superfamily [Ralstonia solanacearum PSI07] gi|299078041|emb|CBJ50683.2| glutamine transporter subunit ; periplasmic binding component of ABC superfamily [Ralstonia solanacearum PSI07] Length = 248 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 78/235 (33%), Gaps = 20/235 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L+ F S + A L +T V F + N + GFD Sbjct: 1 MKFAAKLVAAVLVAASFASQAARAET---------LLVACDTAFVPFEFKQGN-QYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ D + P++ ALQ++ +D R+ + F Sbjct: 51 IDLWKEIAKDARIDY---KLQPMDFNGILPALQTRNVDAALAGITIKDERKKI--VDFSD 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ I S L G S+ ++ GT+ ADY KAH F ++ Sbjct: 106 GYYDSGFMLMVPAASTIKSADDLKGKSLAIKTGTSA----ADYAKAHFTGTELRQFPNID 161 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 R DA D + T + + +++ A +G Sbjct: 162 NAYLELATGRVDAAMHDTPNVLYYINTVGKGRVKAVGQQMMAHQ-YGIAFPKGSP 215 >gi|218284063|ref|ZP_03489891.1| hypothetical protein EUBIFOR_02494 [Eubacterium biforme DSM 3989] gi|218215385|gb|EEC88923.1| hypothetical protein EUBIFOR_02494 [Eubacterium biforme DSM 3989] Length = 253 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 87/258 (33%), Gaps = 24/258 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L L S+ + D+K + GI+ + GD GFD Sbjct: 1 MKKIIKLGMAALTALTMAGCSSES---EDVK---TITVGISPDYAPYESENKKGDIVGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQY----LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 D + D + Y ++ LQ QID+ + + + Sbjct: 55 PDMMKCF-EEYLSDEEGVTYKLEMKKMDFDNIITQLQGDQIDVGISGFTY----DSKRKV 109 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + Q ++ I+SVS L G S+ Q G T E + A + Sbjct: 110 EWSDPYLGSSQVAVVPNDSEIASVSDLEGKSLVAQTGATGETAAKEVKDAKVTGLKNVQ- 168 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 +I A A++ DA D+ + + E +L + + +G+T+ Sbjct: 169 ----DIMNALSANQYDAAIVDL----GVAKNYVKSGEFKMLDESLMDEQNYIIAKKGNTD 220 Query: 237 WYNIVSWTHYAMVTAEEL 254 + ++ + +++ Sbjct: 221 VIDKMNTCIKKFLASDDY 238 >gi|254229978|ref|ZP_04923379.1| bacterial extracellular solute-binding proteins, family 3 [Vibrio sp. Ex25] gi|262392808|ref|YP_003284662.1| cyclohexadienyl dehydratase [Vibrio sp. Ex25] gi|151937480|gb|EDN56337.1| bacterial extracellular solute-binding proteins, family 3 [Vibrio sp. Ex25] gi|262336402|gb|ACY50197.1| cyclohexadienyl dehydratase [Vibrio sp. Ex25] Length = 258 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 73/245 (29%), Gaps = 14/245 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K L + +L T + S L I G L+ G ++GF Sbjct: 1 MKKILL--ALGMCLLAATQIAHAESRLQSILDSGVLRVGTTGDWNPMTMKDPATNSYRGF 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D L+ + ++Y+ + K + + + D ++ + + R G + Sbjct: 59 DIDVTTELAKDLGVK---VEYVATDWKTLVNGITANKYD-ITGSASLNMSRAKVAGYSQP 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 S + + GT E + ++F IV E Sbjct: 115 YFYLAFVPVVQKKDLAKFSDWADFNTPDVKVAATLGTVQEKMVKEFFPLAQH----IVIE 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A R D L + V + +P+A + Q D W Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVDKFKQ-LAIVPVTAPRKPTPIAMLLPQDDQVW 229 Query: 238 YNIVS 242 N ++ Sbjct: 230 INYIN 234 >gi|325830412|ref|ZP_08163869.1| ABC transporter, substrate-binding protein, family 3 [Eggerthella sp. HGA1] gi|325487879|gb|EGC90317.1| ABC transporter, substrate-binding protein, family 3 [Eggerthella sp. HGA1] Length = 280 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 79/237 (33%), Gaps = 16/237 (6%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 TS + L G L + F + + +GF VD L+ + Sbjct: 44 TTTSSTSGNDAGYTL---VNDGKLTVAASLDFPPFENLNGD-KPEGFAVDLMTLLAEEMG 99 Query: 73 DDPSKIQYLPLNAKERFLALQSK-QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 + + +Q+ + D+ + T R + F Q + Sbjct: 100 LECEYLP--STKFDTIVPLIQTGGKADVGVSSFTITDKR--LQQVDFTDPYCNVNQSITV 155 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 GI+ V+QL G I Q+GTT A+ K ++ + + AA + + Sbjct: 156 RSDSGITDVAQLEGKKIGAQSGTTGYEWAAENIK----DAEVTGYDEMTAVFAALDSGQI 211 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 DA + D+ + ++ +I + A A+ + + E ++ A+ Sbjct: 212 DAVSVDLPVANYYVRSYSDCQ---VIKEIPTGEQYAVAVSKENPELTKALNKALQAV 265 >gi|294785618|ref|ZP_06750906.1| CjaC protein [Fusobacterium sp. 3_1_27] gi|294487332|gb|EFG34694.1| CjaC protein [Fusobacterium sp. 3_1_27] Length = 243 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 89/257 (34%), Gaps = 24/257 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + ++ L+ + + K + G N F ++ + GFD Sbjct: 1 MKKFFKLMLMSLLSVVISVSVFA--------KSNVIYVGTNAEFAPFEYLEKD-KIVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+S + + + ALQ+K++D++ T R+ +AF Sbjct: 52 IDLLDAISKETG---LEFKIQDMAFDGLLPALQTKKVDMVIAGMSATPERQK--AVAFSK 106 Query: 121 ITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Q I K K + S LSG + V G T + +++ F Sbjct: 107 PYFKAKQVVITTPEKAKSLKSFKDLSGKKVGVMLGFTGDTVVSEI-----KGVKVERFNA 161 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 A ++ DA D A K T + + VI + A A + D E Sbjct: 162 AYAAILALSQNKVDAVVLDSE--PAKKYTANN-KQFVIANIPAEEEDYAIAFRKNDKELI 218 Query: 239 NIVSWTHYAMVTAEELG 255 N V+ + + E Sbjct: 219 NKVNAALDKIKSNGEYD 235 >gi|330861367|emb|CBX71602.1| histidine-binding periplasmic protein [Yersinia enterocolitica W22703] Length = 228 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 76/214 (35%), Gaps = 12/214 (5%) Query: 40 INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 ++ G F + +G+ GFD+D AL + +K ++ + AL +++ D Sbjct: 1 MDGGYPPFDVLAPSGEITGFDIDIANALCDNL---HAKCVFVKQPFESMIAALNARKFDA 57 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTEL 158 + + T R+ + F Y + K + V+ L G ++ VQ G+ E Sbjct: 58 IIASLSITDERKK--EVDFTDRYYRSAAQLVARKGSPLSPDVASLKGKTVGVQTGSIHET 115 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 ++ + + + + + R +A D + + R + Sbjct: 116 YAKKHWG--GQGVKIVSYANQDNVYLDLMSGRINASLQDNIQAASSFIDTPRGQKFAFAG 173 Query: 219 DIISKSPL----APAIIQGDTEWYNIVSWTHYAM 248 +I + A+ + + + ++ A+ Sbjct: 174 PVIQDETISSDVGIAVGKDNPALRDALNGAIKAI 207 >gi|52078835|ref|YP_077626.1| putative extracellular solute-binding protein YckB [Bacillus licheniformis ATCC 14580] gi|52784206|ref|YP_090035.1| YckB [Bacillus licheniformis ATCC 14580] gi|319648871|ref|ZP_08003080.1| YckB protein [Bacillus sp. BT1B_CT2] gi|52002046|gb|AAU21988.1| putative extracellular solute-binding protein YckB [Bacillus licheniformis ATCC 14580] gi|52346708|gb|AAU39342.1| YckB [Bacillus licheniformis ATCC 14580] gi|317388865|gb|EFV69683.1| YckB protein [Bacillus sp. BT1B_CT2] Length = 291 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 33/258 (12%), Positives = 73/258 (28%), Gaps = 17/258 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKAN- 53 + + + + L + ST + +IK++G + + L + + Sbjct: 8 KRITLLITVLALALITAACSTAQNKAENKKTAWDEIKEKGKIVVATSGTLYPTSYHDTDS 67 Query: 54 --GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G++V+ R + + D +++ + A+ S Q+D + + T R+ Sbjct: 68 GKDKLTGYEVEVIREAAERLDLD---VEFKEMGFDGMLTAVGSGQVDAAANDITMTDDRK 124 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + F GI ++ L G A T D + + + Sbjct: 125 EKFLFSTPYKYSFGTAIVRKKDLSGIHTLEDLKGKKAAGAATTVYM----DIARKYGAEE 180 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 ++ R D D + + Sbjct: 181 VIYDNATNDQFLKDVANGRTDVILNDYYLQKLALAAMPDLDLTIHPDLKYYPHQQGMIMK 240 Query: 232 QGDTEWYNIVSWTHYAMV 249 +G+TE T M+ Sbjct: 241 KGNTELKKQFDKTIDEML 258 >gi|320332698|ref|YP_004169409.1| ABC transporter periplasmic subunit [Deinococcus maricopensis DSM 21211] gi|319753987|gb|ADV65744.1| ABC-type transporter, periplasmic subunit family 3 [Deinococcus maricopensis DSM 21211] Length = 256 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 82/235 (34%), Gaps = 14/235 (5%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + S +A+ L DIK+ G L+ F K GF+V+ A++ + Sbjct: 16 VVTGSLHAHANTLADIKRTGVLRLATEGNYTPFNYYKGK-TLTGFEVELGNAIAKQLGVK 74 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 Q+ + + LQ + D++ + T R+ + F ++ G ++ K Sbjct: 75 A---QWTTNVFESLLIGLQQNKYDLVIASHGITPERQA--AVDFSAP-HYCSGGILVSKP 128 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 G +V+ L G + + T+ + F + A A R D Sbjct: 129 GGPRTVADLKGKIVTMGVNTSYLQYVQRLPGIR----AVKTFPTTNDQLNAVLAGRADTM 184 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 D + L D+I + A+ + +T+ + V+ A++ Sbjct: 185 VLDRFNAIDASKALPGKLQ---LGDVIFPERIGMAMSKRNTQLVSAVNAALAAVM 236 >gi|121609557|ref|YP_997364.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121554197|gb|ABM58346.1| extracellular solute-binding protein, family 3 [Verminephrobacter eiseniae EF01-2] Length = 265 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 34/229 (14%), Positives = 77/229 (33%), Gaps = 11/229 (4%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + +I KRG L I+T + ++ A+ +G DV ++ + ++ +P+ + Sbjct: 29 TVDEIIKRGKLLVAIDTNNPPWGQMNASMQPEGIDVGVANLMAKYMG---VPLEIVPVTS 85 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 + R + + + D++ T R +L + + + I S L+G Sbjct: 86 QNRIPFIVTGKADVVMATLTITPQR--ALQIWYSIPYALQDSVIMTTDNSPIKSFDDLNG 143 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + V G + + M+ F+ A A + DA + Sbjct: 144 KRVSVVRGAIQDALVTRMAPRAQMQ----RFDNDASTIQALVAGQVDASATGFLIPA--Q 197 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 T P + + + + + + + + Y + EL Sbjct: 198 TTKANPGKTYVSRLKLGTQHIGIGMKRNSPDLLQWTNTFIYHIRANGEL 246 >gi|299541804|ref|ZP_07052127.1| amino acid ABC transporter ATP-binding protein [Lysinibacillus fusiformis ZC1] gi|298725542|gb|EFI66183.1| amino acid ABC transporter ATP-binding protein [Lysinibacillus fusiformis ZC1] Length = 260 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 34/245 (13%), Positives = 81/245 (33%), Gaps = 17/245 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILG--DIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K F + + ++ + + ++ + + F+ + + GFD Sbjct: 5 KKFLLVLSTIVACMLSGCGEKQKLEDGSELINKNQFVFATSGEFKPFSYINDDLTMSGFD 64 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ A++ + +P + + K +++ + D + R ++F Sbjct: 65 IEVGEAIAKEMGLEPVQKRIK---FKGIVEGVKTGRADAAVASHTINPQRSKH--VSFST 119 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y+ G I +V L G + V G+T T A + ++ Sbjct: 120 PYYYSGPKIFTRPDSKIRTVEDLEGKEVAVAKGSTYADT------ASKYTDNIKTYDSDI 173 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + R DA D T ++ + +I++S A + Q + + Sbjct: 174 TALKALSSGRHDAVITDFVTG----KTAEKEGFKIKGQQLINRSEQAIVLPQDNPKLLKR 229 Query: 241 VSWTH 245 V+ + Sbjct: 230 VNESL 234 >gi|222102583|ref|YP_002539622.1| ABC transporter substrate binding protein (nopaline) [Agrobacterium vitis S4] gi|221739184|gb|ACM39917.1| ABC transporter substrate binding protein (nopaline) [Agrobacterium vitis S4] Length = 257 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 66/230 (28%), Gaps = 14/230 (6%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 L IK G K G F +G GFDV+ A+++ + ++ Sbjct: 24 GENLATIKSAGVFKIGTEGTYAPFTYHNESGKLVGFDVEIGEAIAAKLGVKAE---FVEG 80 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQ 142 L +K+ D + T R F I+ I + Sbjct: 81 KWDGLIAGLDAKRYDTVINQVGITETR--KQKYDFSDPYIASKAVLIVRSDDNNIKDFAD 138 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G Q+ ++ LA+ A + + ++ R DA D + Sbjct: 139 LKGKKSA-QSLSSNFGKLAEKSGA-----ELVGTDGFDQSIQLVLTRRADATINDSLSFL 192 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 K ++ I + + E ++ A + A+ Sbjct: 193 DFKKHKPDAPV-KVVAQQSDADYSGVIIRKQEPELLTAINKAL-ADIKAD 240 >gi|206561500|ref|YP_002232265.1| putative periplasmic lysine-arginine-ornithine-binding protein [Burkholderia cenocepacia J2315] gi|198037542|emb|CAR53479.1| putative periplasmic lysine-arginine-ornithine-binding protein [Burkholderia cenocepacia J2315] Length = 258 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 79/220 (35%), Gaps = 13/220 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ GI F G +GFDVD A+ + + K ++ + ALQ+ Sbjct: 25 TLRFGIEAAYPPFESKTPAGQLQGFDVDVGNAVCAKL---NMKCVWVENSFDGLIPALQA 81 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153 ++ D ++ + T R+ + F P Y + + V+ L G + V G Sbjct: 82 RKFDAINSAMNITAKRK--QSIDFTPAIYVVPIVMVAKHGSPLKPDVASLRGKHVGVLQG 139 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 ++ E L ++ + + + ++ ++I A A R DA + L + Sbjct: 140 SSQEDFLKAHWASAGVA--VVSYQDQDQIYADLVAGRLDAAVQEAQTAQDGFLDKPAGRD 197 Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248 + I+ + + + + D + A+ Sbjct: 198 YQIVGEPLKDPATLGEGTGFGMRKNDKALQAKIVGALDAL 237 >gi|330432499|gb|AEC17558.1| cystine transporter subunit [Gallibacterium anatis UMN179] Length = 270 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 33/241 (13%), Positives = 72/241 (29%), Gaps = 12/241 (4%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 L ++ A + + +G + G F +G G+DV+ R Sbjct: 16 LGFALAQSAFALSNEEAAADLAKRVNDKGTIVVGTEGTYPPFTYHDESGKLTGYDVELTR 75 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 +++ + +++ L + + D+++ T E + Sbjct: 76 LVANELGVK---VEFKETQWDAMLSGLNNHRFDLVANQVALT-TPERRAKYDKSLEYSYS 131 Query: 126 GQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 G + K + I + L G Q+ T+ LA A + + + + Sbjct: 132 GAVAVARKGDQRIKDWADLKGLKSA-QSFTSNYGELATKNGA-----EIVGVDGLAQALQ 185 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 +R D D A+ + + +IL D +G+ V+ Sbjct: 186 LVLQNRADVTLNDRLAVLDFLHKHPNANLEIILRDKNQLGS-GFIFNKGNAAVIEKVNAA 244 Query: 245 H 245 Sbjct: 245 I 245 >gi|54293480|ref|YP_125895.1| hypothetical protein lpl0529 [Legionella pneumophila str. Lens] gi|53753312|emb|CAH14759.1| hypothetical protein lpl0529 [Legionella pneumophila str. Lens] gi|307609294|emb|CBW98770.1| hypothetical protein LPW_05691 [Legionella pneumophila 130b] Length = 244 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 70/228 (30%), Gaps = 13/228 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K + L+ + F + NG+ KGFD+D + ++ + + + + Sbjct: 23 KNQNTLRFSTSAEYPPFEYI-ENGEIKGFDIDLAKLIAKELGKEA---VFDNMQFSTVLP 78 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 AL S Q D+ T E F YF+G + + + +SQL+G I V Sbjct: 79 ALNSGQDDVAIATITITE--ERKKNFDFSIPYYFEGMAAVFDISQPVKEISQLTGKKIAV 136 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q G+ E+ L F + + A A D D + Sbjct: 137 QLGSVMEIWLHQNFP----NAEITALDNNNQAIEALIAGHVDVVLMDGAQGGVYSKKYP- 191 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + IL + + I S E + Sbjct: 192 GLSYSILAKAN--EGYGLVLRKDSPLRDEINSALENLKAKGEIQKLES 237 >gi|254473347|ref|ZP_05086744.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp. JE062] gi|211957463|gb|EEA92666.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp. JE062] Length = 258 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 67/190 (35%), Gaps = 19/190 (10%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 F ++ L +L T ++ G FA A+G GF+++ Sbjct: 6 FATVATLALLASTQVQAKEWT--------KVRIGTEASYPPFAYTTADGKLVGFEIELGN 57 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL + + + +++P++ L + + D + + T R + F Y Sbjct: 58 ALCAELKVE---CEWMPVDWDGLIPGLVAGKYDTIMASMSITPER--KQRIQFSEKYYQT 112 Query: 126 GQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G + K I+ SV + GA + Q G T + D K ++ +E Sbjct: 113 PPGVAVPKDSKITEASVEGMDGALVGAQVGATHAVFAEDIL----TKSEVSLYPTADEYK 168 Query: 184 AAYRAHRCDA 193 + R DA Sbjct: 169 LDLESGRLDA 178 >gi|300811214|ref|ZP_07091721.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497801|gb|EFK32816.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 485 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 92/247 (37%), Gaps = 21/247 (8%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK----GFDVD 62 VS+L + + AS + G + F +G + G D++ Sbjct: 14 VSLLIAALFLTAPKAQAAS-------KKTYIIGTDQTFKPFEIQDKDGTYNGKNPGIDIE 66 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R ++ + K + ++ ALQS QID + T R+ + + F Sbjct: 67 ILREIAK---HENFKYELKIMSFNADVQALQSGQIDGMIAGMSVTEERKKT--IDFSNSY 121 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y DG + K I+S+ L G ++ V+ GTT+ + K + K + Sbjct: 122 YTDGVCLAVAKDSKITSMKDLKGKTVNVKTGTTSAIYAKSIQKKYGFK--LKYYTNSNTS 179 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A ++ DA D +L+ + I+ +S +PLA A+ +G+ + + Sbjct: 180 WADVKSGNADACFDDGP---SLRYGIANGTGLRIVGKQVSNAPLAFAVKKGENQELLKMF 236 Query: 243 WTHYAMV 249 A + Sbjct: 237 NDGLAWL 243 >gi|283458864|ref|YP_003363510.1| amino acid ABC transporter/signal transduction system periplasmic protein [Rothia mucilaginosa DY-18] gi|283134925|dbj|BAI65690.1| ABC-type amino acid transport/signal transduction system, periplasmic component [Rothia mucilaginosa DY-18] Length = 281 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 32/253 (12%), Positives = 74/253 (29%), Gaps = 22/253 (8%) Query: 5 FFVSILCLIILFFTSFSTNA-----------SILGDIKKRGFLKCGINTGLVGFAEVKAN 53 + L + S ++L IK G ++ G+ + A+ Sbjct: 16 LLGAALAGTTGLLAACSGGNGSSAGSAQSSSNLLESIKSAGKIRIGVEGTYRPYTYHDAS 75 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G GF+ D L+ + Y+ + + + DI+ N T R+ Sbjct: 76 GKLAGFEYDIAETLAKDLGVTAE---YIETPWDSLIAGVDAGRYDIVLNNVAPTEERKK- 131 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + K + + S++SG S A + + + Sbjct: 132 -KYDFSVPYAHSRARVGVKKDSSLKNASEISGHSAAQSATSNYRKLVEE------RGATI 184 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I +E R + D + + + ++ ++ + +A + + Sbjct: 185 IEVTGFDEAIEQVLTGRAELTANDSVSFAEYFKEHPDANLRLLEGEVGPGTNVAVLLPKN 244 Query: 234 DTEWYNIVSWTHY 246 T + + + Sbjct: 245 QTALKDAIDASIK 257 >gi|157164888|ref|YP_001466154.1| solute-binding family 1 protein [Campylobacter concisus 13826] gi|112800377|gb|EAT97721.1| L-cystine-binding protein TcyA [Campylobacter concisus 13826] Length = 250 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 41/247 (16%), Positives = 73/247 (29%), Gaps = 20/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F ++L ++ + + + A + D G L F + G+D Sbjct: 1 MK---FTNLLKVVAVLAMALNLQAKTIKD----GVLTVATEGNYAPFTFYNDKNELVGYD 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD R ++ + K+++L A + + D++ T R+ AF Sbjct: 54 VDIARVVAQKL---NLKVEFLTAPWDAMLAAFDAGKADVVFNQVSITDERKK--KYAFSV 108 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I K I S + L G A + A +V + Sbjct: 109 PYTVTFGAIITRKDNNDIKSFADLKGKKDADSATSNWAKV------AVKYGAEHVVTDSF 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R DA D Y I + K A A+ + + E Sbjct: 163 AKSMELLISRRVDAVVRDNIVFYDFIKERPNAPV-KIAASLDEKDYTAAAVKKDNAELAE 221 Query: 240 IVSWTHY 246 +S Sbjct: 222 QISNALN 228 >gi|328958164|ref|YP_004375550.1| high affinity arginine ABC transporter [Carnobacterium sp. 17-4] gi|328674488|gb|AEB30534.1| high affinity arginine ABC transporter [Carnobacterium sp. 17-4] Length = 473 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 90/291 (30%), Gaps = 41/291 (14%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 ++++ I+L T+ + + G + F +G++KG DVD Sbjct: 4 LLLTVIFTILLPGTASAQETN--------KTYIIGTDVTFAPFEYKDVDGEYKGIDVDLL 55 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 A++ + PL AL+S QID + T R F + Sbjct: 56 DAIAKDQGFNYE---LRPLGFSAALQALESNQIDGMIAGMSITPER--QESFDFSDPYFE 110 Query: 125 DGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G + I+S L G ++ V+ GTT + + FE + Sbjct: 111 SGVVMAVSESNDEITSYEDLEGKTVAVKVGTTGAAFAESIQDEFGFELN--TFEDSANMY 168 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP---LAPAIIQGDTEWYNI 240 DA D + + + L + P A+ +G Sbjct: 169 EDVLTGNSDAAFEDYPVMAYAIQS------GLGLKLTMDPEPGDNYGFAVNKGQ------ 216 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290 AE L + + + + T ++ +LG + N LG Sbjct: 217 ---------NAELLEMFNNGLINIRANGTYDEIMDTYLGDTSTKNDSANLG 258 >gi|145591541|ref|YP_001153543.1| extracellular solute-binding protein [Pyrobaculum arsenaticum DSM 13514] gi|145283309|gb|ABP50891.1| extracellular solute-binding protein, family 3 [Pyrobaculum arsenaticum DSM 13514] Length = 249 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 73/231 (31%), Gaps = 14/231 (6%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 + IK RG L G + + + G G D++ + ++ ++ ++ + Sbjct: 19 SIDTIKARGKLVVGTSADWPPYEYI-EGGKVVGIDIEIAKRIADSLG---VGLEVRDMKF 74 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 A++ +D++ + T RE + F D I + + L G Sbjct: 75 SALIEAVKRGDVDVVLADMAITPERET--QVLFSIPYQVDTSVVIAKRGAAMRGPEDLKG 132 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFER-VEEIDAAYRAHRCDAYTGDISALYAL 204 ++ VQ GT E + + +++ + A R DA A+ Sbjct: 133 RAVGVQVGTVQEDWA---LRTLGNVSKIVRYDKVYPYMVEALRKGDVDAIVVGGVVGRAI 189 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + A A+ + V Y M+ + E+ Sbjct: 190 VTRFPE----FEIVASTGVRYSAVAMPSCAYDLKLQVDRVIYDMLQSGEME 236 >gi|317489458|ref|ZP_07947968.1| bacterial extracellular solute-binding protein, family 3 [Eggerthella sp. 1_3_56FAA] gi|316911387|gb|EFV32986.1| bacterial extracellular solute-binding protein, family 3 [Eggerthella sp. 1_3_56FAA] Length = 267 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 79/237 (33%), Gaps = 16/237 (6%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 TS + L G L + F + + +GF VD L+ + Sbjct: 31 TTTSSTSGNDAGYTL---VNDGKLTVAASLDFPPFENLNGD-KPEGFAVDLMTLLAEEMG 86 Query: 73 DDPSKIQYLPLNAKERFLALQSK-QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 + + +Q+ + D+ + T R + F Q + Sbjct: 87 LECEYLP--STKFDTIVPLIQTGGKADVGVSSFTITDKR--LQQVDFTDPYCNVNQSITV 142 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 GI+ V+QL G I Q+GTT A+ K ++ + + AA + + Sbjct: 143 RSDSGITDVAQLEGKKIGAQSGTTGYEWAAENIK----DAEVTGYDEMTAVFAALDSGQI 198 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 DA + D+ + ++ +I + A A+ + + E ++ A+ Sbjct: 199 DAVSVDLPVANYYVRSYSDCQ---VIKEIPTGEQYAVAVSKENPELTKALNKALQAV 252 >gi|290961426|ref|YP_003492608.1| solute-binding protein [Streptomyces scabiei 87.22] gi|260650952|emb|CBG74070.1| putative secreted solute-binding protein [Streptomyces scabiei 87.22] Length = 283 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 81/228 (35%), Gaps = 13/228 (5%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + T A + +K G L + F +E+ G +GFDV ++ + Sbjct: 36 ATKTAAGGVELVKA-GQLTTCTHLPYPPFQSEID--GKVQGFDVSLIDLVAQDLGVKQE- 91 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 I P + L S + D+ + T R+ + F + Q + KK GI Sbjct: 92 ILDTPFENFKTGAFLNSGECDLAAAGMTITDERKK--NVDFSDPYFEATQAVLADKKAGI 149 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 SS + L G + QA TT E DY K+ + + FE + + R + DA D Sbjct: 150 SSFADLKGKKVGTQAQTTGE----DYAKSKGIDS--VSFESSDAVLNGLRTRQVDAVIID 203 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + + I + + +G+T+ + Sbjct: 204 YPVVQGWLKDKANAAAFEVAEQINTGEQYGFTVRKGNTKLLAAIDKAL 251 >gi|187779935|ref|ZP_02996408.1| hypothetical protein CLOSPO_03531 [Clostridium sporogenes ATCC 15579] gi|187773560|gb|EDU37362.1| hypothetical protein CLOSPO_03531 [Clostridium sporogenes ATCC 15579] Length = 269 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 76/267 (28%), Gaps = 21/267 (7%) Query: 1 MYKD----FFVSILCLIILFFTSFSTNASI-------LGDIKKRGFLKCGINTGLVGFAE 49 M+K + C++ S +K G L G+ F Sbjct: 1 MFKKKVLNVLFMMACILSFTLVGCGQKTSSSNEKDSSYSKVKDNGKLVVGLCAQYPPFES 60 Query: 50 VKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 +GFDVD + L + K++ + + D+L Sbjct: 61 RNDKTSKIEGFDVDLAKELGKEM---NLKVEIKDAEWEALLGGVSKGDYDVLITCMSKKE 117 Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 + ++ + D + I + L G + VQ T++E + + Sbjct: 118 AAQANINTSDTY-YKLDDIIVVNKNNNSIHNKDDLKGKVVGVQTSTSSEQVV----DKLD 172 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + R E + +R +A A + + + I+ + S + Sbjct: 173 EIKEIKRYNRNPEAFIDLKNNRINAVVVG-YAYATTAMKDKKDDNLKIINSPVGSSDIVM 231 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELG 255 +G + ++ + + + Sbjct: 232 VTKKGSNDLTKELNKALKKVKESGKYE 258 >gi|163744466|ref|ZP_02151826.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Oceanibulbus indolifex HEL-45] gi|161381284|gb|EDQ05693.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Oceanibulbus indolifex HEL-45] Length = 257 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 74/202 (36%), Gaps = 21/202 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDV 61 K + L I+ + + +K GI FA + A+G+W+G++V Sbjct: 4 KKLMTTALATAIVSAGAVAAE-----------EVKIGIAAEPYPPFASLNASGEWEGWEV 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + A+ +A D P+ +L +Q+D + + T R + F Sbjct: 53 EVINAVCAAAELD---CVITPVAWDGIIPSLTGQQVDAIMASMSITEER--QQTIDFSDP 107 Query: 122 TYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + K I + L+G I +QA T + +YF V++ + Sbjct: 108 YYNTPAVIVADKSMDIEPTPESLAGKIIGIQASTIHQAYANEYF---GDAAEIRVYQTQD 164 Query: 181 EIDAAYRAHRCDAYTGDISALY 202 E + + R DA D A+ Sbjct: 165 EANQDLVSGRIDATQADSIAMA 186 >gi|259418412|ref|ZP_05742330.1| extracellular solute-binding protein, family 3 [Silicibacter sp. TrichCH4B] gi|259345807|gb|EEW57651.1| extracellular solute-binding protein, family 3 [Silicibacter sp. TrichCH4B] Length = 277 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 88/250 (35%), Gaps = 24/250 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L L F T+ + + G++ G F VK + + +GF+ Sbjct: 28 MKKQIAITALTLATAFGTAHAE------------TINVGMSGGYFPFTFVKLD-ELQGFE 74 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ ++ ++ ++ AL+S +ID ++ T RE + Sbjct: 75 VDVINAIAEETG---DEVNFVTMSFSGLIGALESGRIDTIANQITITPEREQKFAFSQPY 131 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + I + S LSG S+ V G+ E L + + +E Sbjct: 132 VYDGAQVVVKRGNEDTIKNTSDLSGKSVAVNLGSNFEELLNTL--PNASEIEIRTYESNI 189 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 D A R DA+ D + L + P P ++ A+ E Sbjct: 190 AQDTAL--GRVDAFVMDRVSSAQLISESPLPLALAGSPFSEIRN----ALPFRTDENGIA 243 Query: 241 VSWTHYAMVT 250 + A +T Sbjct: 244 LRDKFDAALT 253 >gi|134278238|ref|ZP_01764952.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei 305] gi|134250022|gb|EBA50102.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia pseudomallei 305] Length = 259 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 92/258 (35%), Gaps = 24/258 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F + ++ T+F+ ++ L+ G+ F NG +GFD Sbjct: 1 MKRRHFWLAIWCELVSLTAFADSS----------TLRFGLEAQYPPFESKAPNGTLQGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +++ + ALQ ++ D ++ + T R + F Sbjct: 51 IDLGNAVCA---TAHLTCKWVETSFDGLIPALQGRKFDAINSAMNATEKR--RQAIDFTT 105 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y I G ++++ L G + V + E +++ + + ++ Sbjct: 106 VIYRVPTQLIARSGSGLVATLESLKGKHVGVLQASIQETYAKAHWEPDGVS--VVAYQDQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGD 234 ++ A A R DA A L+ + + + +A + +GD Sbjct: 164 NQVYADLVAGRLDATLVLAPAGQKGFLSQPNGKGFAFVGEPVRDDKILGSGIAFGVRKGD 223 Query: 235 TEWYNIVSWTHYAMVTAE 252 N ++ A + A+ Sbjct: 224 ESLRNRLNTAI-AKIEAD 240 >gi|167033584|ref|YP_001668815.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166860072|gb|ABY98479.1| extracellular solute-binding protein family 3 [Pseudomonas putida GB-1] Length = 279 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 85/259 (32%), Gaps = 20/259 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + F ++ + + + + L I + + + + + KGFD+D Sbjct: 6 RLFALTAVAGSLTLMAGAAWAGATLDRIHQSKVMNVATAANWPPQSFLGEDNTLKGFDID 65 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + + +++ ++ + + D+ + T R L F I Sbjct: 66 VANEIGKRLG---TQVAFVTPEYGIITAGRWASRWDLSVGSMTPTTERGRV--LDFPAIY 120 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK-------AHNMKYHPIV 175 Y+ F +HK S+ + L+G +I V+AGTT+E + K A + P Sbjct: 121 YYTPYVFAVHKDAAGSNTADLNGKTIGVEAGTTSEDYINRRLKIDAADVPAFSYSVEPGE 180 Query: 176 FERVEEIDAAYRA------HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + R DA + + P + PLA A Sbjct: 181 VQTYGDSMGPLDDLRMGNGTRLDATLSALPTVMGAI-KAGYPIT-PVQGKPAYYEPLAIA 238 Query: 230 IIQGDTEWYNIVSWTHYAM 248 +GD + ++ M Sbjct: 239 TDKGDDAFNAELAKAVEGM 257 >gi|117919334|ref|YP_868526.1| extracellular solute-binding protein [Shewanella sp. ANA-3] gi|117611666|gb|ABK47120.1| extracellular solute-binding protein, family 3 [Shewanella sp. ANA-3] Length = 244 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 72/228 (31%), Gaps = 17/228 (7%) Query: 31 KKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 K L G N F V + KGFD++ + ++ ++ + Sbjct: 23 KSNDILVVGTNAAFPPFEYVGGQSGDEIKGFDIELAKRIAKDAGK---TLKVENMKFDSL 79 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147 +AL S +ID ++ T R+ + F Y Q +++K I ++ + Sbjct: 80 IVALNSGKIDFIASGMTITPERQA--SVNFSEPYYEATQVLLVNKDNDTIHTLDDIKDKH 137 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 VQ G+T + + + F E + + D D Sbjct: 138 FAVQLGSTAD------MMSKKYTQNVTAFNTGFEAIMELKNGKVDLVLFDSEPAANYLAK 191 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 N + ++ A+ + E N ++ T + + + Sbjct: 192 NP---DLKLIKLDFPPEFYGFAVSKQQPELLNSINNTLKNLKESGQYQ 236 >gi|330944616|gb|EGH46566.1| extracellular solute-binding protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 147 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 2/121 (1%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + + S ++S L IK R L G+ + F V G + GFD D + + + D Sbjct: 29 VAKAAPSPSSSYLETIKARDKLIVGVFSDKPPFGFVNEQGQYVGFDTDLGKRFAKDLLGD 88 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 KI+++ + R LQS ++D++ N T R + F ++ + Sbjct: 89 EKKIEFVVVEPASRIPFLQSDKVDLILANMTVTPER--REAVDFTNPNLRVAVQALVPQA 146 Query: 135 K 135 Sbjct: 147 S 147 >gi|257868053|ref|ZP_05647706.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257874383|ref|ZP_05654036.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] gi|257802136|gb|EEV31039.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257808547|gb|EEV37369.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] Length = 493 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 85/263 (32%), Gaps = 22/263 (8%) Query: 1 MYK----DFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEV-- 50 M + + I+ ++ FF +A I +K+ G L G++ + Sbjct: 1 MKRFSKGTVLLGIITALLPFFFVGQAHAEETDPIYEKVKENGVLVVGLSADYAPYEFRAN 60 Query: 51 -KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 + G D+ + ++ + D ++ L AL++ +ID++ T Sbjct: 61 VDGKNEIVGIDISIAQKIADDLGVD---LKIEELGFDALLGALKTGKIDVVISGMAATDE 117 Query: 110 REISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R + F Q ++ + S + G ++ Q TT E Sbjct: 118 RRK--EVNFTDTYMEVQQTVLVRAEDADRFQSTADFDGVAVGAQRQTTQEELANTEL--- 172 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 +RV ++ ++ + DA + A ND + + A Sbjct: 173 -TGSTVTSLQRVPDLITNLKSRKIDAIVMEGPVAEAYVTANDTLALAENVTFENGVKETA 231 Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250 AI + ++ + +++ Sbjct: 232 IAISKEAPVLLEKLNSSIETIIS 254 >gi|325063358|gb|ADY67048.1| amino acid ABC transporter, periplasmic protein [Agrobacterium sp. H13-3] Length = 280 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 76/259 (29%), Gaps = 19/259 (7%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 +++ + F + + A +L IK F V +G G+ D + Sbjct: 10 LTLCAAFAVSFGASAHAADLLEKIKADKVFTVATEARFAPFEFV-EDGKIVGYSADIMQE 68 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + A+ K L + L + + D + + T R + L Sbjct: 69 VMKALPGVELKRL--DLPWQGILPGLAASRFDYVVTSVTVTPERMKAYKL--SAPVADAT 124 Query: 127 QGFIMHKKK-GISSVSQLSGASICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEE 181 + K IS ++G + QAG+ L A+ A + E Sbjct: 125 MAILKRKGDAEISKPEDIAGKPVGSQAGSAQLKALETFSAELKAAGKDATTVSSYTDFSE 184 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNI 240 A A R A S L+ RP +LP K+ + A Sbjct: 185 AYADLGAGRLRAVV--NSLPNLLEAARQRPDAFEVVLPTFGPKTYFSWAGRNDTDS---- 238 Query: 241 VSWTHYAMVTAEELGITQK 259 T A + +E + Sbjct: 239 --ATLNAFMDSELAKLNAS 255 >gi|227524184|ref|ZP_03954233.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Lactobacillus hilgardii ATCC 8290] gi|227088654|gb|EEI23966.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Lactobacillus hilgardii ATCC 8290] Length = 476 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 36/234 (15%), Positives = 73/234 (31%), Gaps = 19/234 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + + L L F++ + A G + F + G D+D Sbjct: 12 RWVVFLMTFLTCLIFSNIAAQAKTYQ---------IGTDVTYPPFEFANKQNKYVGIDID 62 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + K+ P+ ++QS Q D + T R+ F Sbjct: 63 IMNAIAKE---EGFKVHIKPVGFNAAVQSVQSGQEDGVIAGMTITPDRQA--KFDFGTPY 117 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y G + K I++ QL G + ++ GT K + K + F+ + + Sbjct: 118 YKTGVVMAVAKSSHITNFKQLKGKRVALKTGTAAADYANSIKKKYGFKT--VTFDDSDNM 175 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 A D + + + + I+ + A+ +G + Sbjct: 176 YQDVTTGNSVACFEDQPVM---QYGIKQGLKLKIVTKPANTGWYGFAVKKGTHK 226 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 69/203 (33%), Gaps = 10/203 (4%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G + F + G D+D RA+++ K++ PL A++ Sbjct: 264 KTFTIGTDVTFPPFEFANKQNKYVGIDMDLVRAIANE---QGFKVKIKPLGFNAAVQAVE 320 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 S QID + T R+ F + G ++KK + S+SQL G + V+ G Sbjct: 321 SGQIDGVIAGMSITNARKA--QFNFSNPYFTSGVVMAVNKKSKVKSLSQLRGKKVAVKTG 378 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 T K + F+ + A D + + + ++ Sbjct: 379 TAGADYANSIKKKYGF--TVTTFDDSNNMYQDVTTGNSAACFEDHPVM---QYAIKQGTK 433 Query: 214 HVILPDIISKSPLAPAIIQGDTE 236 I+ +P A+ +G + Sbjct: 434 LKIVTKPAESAPYGFAVKKGHNK 456 >gi|153010087|ref|YP_001371301.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151561975|gb|ABS15472.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 248 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 76/239 (31%), Gaps = 24/239 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF-LKCGINTGLVGFAEVKA-NGDWKG 58 M K L L +S + +A+ L G LK G +T V G G Sbjct: 1 MKKTILTLALAL----MSSVAAHAADLE-----GKMLKVGSDTTSPPMESVDPATGQIVG 51 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD A+ + I ++ F AL+ D+++ T R+ + F Sbjct: 52 FDVDVVNAICAKINCKAE---FVTTGWDGIFAALEQGNFDLVASGVSITDERKK--AMDF 106 Query: 119 RPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + Q +M + ++ G + QA TT N + + Sbjct: 107 SEPYIVNSQAVLMRAEDDGLTLDDFKSKGKKLSAQANTTDAQVAEGIVGKDN----VVAY 162 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + A + D + + A + E V+ + PL +GD Sbjct: 163 DSFSASVIALKNKDVDGVVINGANAPAYEKEFA--GELVVPIRDLQSDPLGLVFRKGDE 219 >gi|323699626|ref|ZP_08111538.1| Arogenate dehydratase [Desulfovibrio sp. ND132] gi|323459558|gb|EGB15423.1| Arogenate dehydratase [Desulfovibrio desulfuricans ND132] Length = 258 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 96/270 (35%), Gaps = 16/270 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++L +L T ++ A DI G L+ G F+ NG ++GFD Sbjct: 1 MTKT-FGALLVCFMLLCTVSNSQARSFDDIVASGTLRVGTTGDYKPFSF-DNNGTYEGFD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + ++ + + K++ + K L++ + DI T+ R+ F Sbjct: 59 IAVAQSFADRLG---LKLELVKTTWKTLMADLKADKYDIGMSGITRTIARQKEAR--FSQ 113 Query: 121 ITYFDGQGFIMHKKKGIS----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 G+ ++++ + + G I V G T E + KA+ ++F Sbjct: 114 GYVMFGKTILVNRDNVARFKSLADVDVKGVRIGVNPGGTNEKFV----KANIRNAEVVMF 169 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E I A + D D T+ S + +++ L + Sbjct: 170 ESNLAIPPAVAVKKVDVMITDSVEALYYAATDANLSA-PLADAPFTRAELGYLMPASAER 228 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSK 266 + V + M+ E+ ++ +++ Sbjct: 229 LQDTVDFMMDQMILKGEMADLRQQYLHMTE 258 >gi|23098459|ref|NP_691925.1| glutamine ABC transporter glutamine-binding protein [Oceanobacillus iheyensis HTE831] gi|22776685|dbj|BAC12960.1| glutamine ABC transporter glutamine-binding protein [Oceanobacillus iheyensis HTE831] Length = 272 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 86/260 (33%), Gaps = 24/260 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--------------LKCGINTGLVG 46 M K+ + ++ L L + + G + V Sbjct: 1 MKKNKWSLLIVLSALLIFLAACGSGEEDLASGEGEDESNNESSYDLEESYTVVSDNSFVP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F V +G+ GFD++ +A++ + + N LQ++Q DI Sbjct: 61 FEFV-EDGELTGFDIELIKAIADEAGFEIEGGEIQTTNFDGIIPGLQTQQFDIAIAGISI 119 Query: 107 TLLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165 T + + + Y G + + I+S+ L G ++ + G+T+ AD+ + Sbjct: 120 TE--DRKQVIDYSEPYYESGLKIGVSADNEDINSIEDLEGKTVATRMGSTS----ADFLE 173 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225 + FE+++++ A DA D + T + ++ Sbjct: 174 ENTEDATINQFEQLDQVYLAVENGSADAVVYDAPNVDYYISTTGDG--LKTVGELYQAEN 231 Query: 226 LAPAIIQGDTEWYNIVSWTH 245 AI +G+ + V Sbjct: 232 YGIAIAKGNEDLVAAVDDAL 251 >gi|16264849|ref|NP_437641.1| putative amino acid uptake ABC transporter periplasmic solute-binding protein precursor [Sinorhizobium meliloti 1021] gi|307319924|ref|ZP_07599347.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] gi|15140988|emb|CAC49501.1| putative amino acid uptake ABC transporter periplasmic solute-binding protein precursor [Sinorhizobium meliloti 1021] gi|306894464|gb|EFN25227.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti AK83] Length = 248 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 71/237 (29%), Gaps = 22/237 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K + ++ S + L LK G +T V G GF Sbjct: 1 MKKLMIALAVAVLASGGASAADLGGKL--------LKVGSDTTSPPMESVDPATGQIVGF 52 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D A+ + I ++ F AL D+++ T R+ + F Sbjct: 53 DIDVVNAICAKINCQAE---FVTTGWDGIFAALDQGNFDLVASGVSITEERKK--AMDFS 107 Query: 120 PITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + Q +M + S+ G + QA TT N + ++ Sbjct: 108 DPYIVNSQAVLMRVEDQGVSLEDFKSKGKKLSAQANTTDAQVAEGVVGKEN----VVAYD 163 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 A + D + + A + E V+ + PL +GD Sbjct: 164 SFSAAIIALKNKDVDGVVINGANAAAYEREFV--GELVVAIRDLESDPLGLVFRKGD 218 >gi|162148490|ref|YP_001602951.1| putative arginine-binding periplasmic protein 2 [Gluconacetobacter diazotrophicus PAl 5] gi|161787067|emb|CAP56654.1| putative arginine-binding periplasmic protein 2 precursor [Gluconacetobacter diazotrophicus PAl 5] Length = 305 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 89/281 (31%), Gaps = 34/281 (12%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 + ++ A L DI+ G L G+N L A + +GFDVD Sbjct: 43 ILAGCVLSLLPLCIGQGAQARALADIRASGHLNIGVNPALPPLAAYDSRNVIEGFDVDVG 102 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 AL++ + P + +P+++ R L + ++D++ T R +AF Y Sbjct: 103 TALAARLGVSP---RLVPVSSSGRIPYLMAGKVDVVLGGLTRTPERAA--AIAFSAPLYA 157 Query: 125 DGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + I + + L+ + G+T L + ++ + Sbjct: 158 EEFAIIAPAVSRVGGLDDLASGRVRMVEVRGSTAVPFLRTHAPKA----PILLLGSYPDA 213 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA----PAIIQGDTEWY 238 A R DA Y + P + +P A + Q DT+ Sbjct: 214 VRALAQGRGDAMVD--VIEYVGRFLAAEPQAGWTIQ--RGFAPAAGEDCVGVAQSDTDLL 269 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279 +V T + T +R+ G+ Sbjct: 270 RVVDGTL---------------ADLKRDGTIQAAYRRWFGV 295 >gi|126731796|ref|ZP_01747600.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Sagittula stellata E-37] gi|126707623|gb|EBA06685.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Sagittula stellata E-37] Length = 274 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 82/251 (32%), Gaps = 16/251 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 ++ +++ + T+ + A L D L G F +++G GF++D Sbjct: 16 RNLRSTLIGAAFVVATAGAVMAQDLPD-----SLTIGTEGAYPPFTYTESDGSLAGFEID 70 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A+ + + ++ + LQ+++ D + + T R +G F Sbjct: 71 LGNAMCAHL---EMTCDWVAQDWDGLIPGLQAQKYDAIIASLYITDERRKVIG--FSEAY 125 Query: 123 YFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y F + S LSG + Q T+ E + ++ ++E Sbjct: 126 YKVPARFAVPVDSDFEISAEGLSGKIVGTQRATSFERFMNATMP----DVEVRLYGTMDE 181 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEWYNI 240 + R D D+ A+ + L++ + + P+ + Sbjct: 182 AYLDLVSGRVDTVMADVVAMQSSFLSSPEGEAYEMRGPEFTDPQFFGYGAGVAVRQDDQY 241 Query: 241 VSWTHYAMVTA 251 ++ + A Sbjct: 242 IADAFSEAIKA 252 >gi|311898732|dbj|BAJ31140.1| putative glutamate ABC transporter substrate-binding protein [Kitasatospora setae KM-6054] Length = 303 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 39/232 (16%), Positives = 74/232 (31%), Gaps = 12/232 (5%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDP 75 + + K RG L G + G GFD++ + +++ + Sbjct: 49 AAAKLDASKTWTTAKTRGKLVVGAKSDQPFLGFEDVQTGKRNGFDIEIAKMVAADLGFSA 108 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 +I++ +N+ R +L QID T R+ + F Y GQ +++K Sbjct: 109 DQIEFKTINSSARETSLSGDQIDYYVGTYSITPKRKE--QIDFAGPYYIAGQSLLVNKDN 166 Query: 136 G-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+ ++C AG+T+ + FE DA Sbjct: 167 TAITGPETTKDKAVCTAAGSTSVAGIQ------KYGAKVTTFESYSLCVEKLLTKEVDAV 220 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 T D S L + ++ S+ + +GD ++ Sbjct: 221 TTDDSILKGYAA--KNQGQLKVVGTPFSEERYGVGLKKGDAALQKAINDALK 270 >gi|226939780|ref|YP_002794853.1| Glutamine transport system substrate-binding protein precursor [Laribacter hongkongensis HLHK9] gi|226714706|gb|ACO73844.1| Glutamine transport system substrate-binding protein precursor [Laribacter hongkongensis HLHK9] Length = 263 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 73/211 (34%), Gaps = 7/211 (3%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 K G+N F V ++G +GFD++ +A++ A K++ + + F Sbjct: 37 AEKTYKVGVNAAFAPFESVDSSGKMQGFDIELAQAVADAAG---IKVEMVNTPWEGIFAG 93 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 L + D+L T R+ + F + Q ++ K K + S L + V Sbjct: 94 LDNGDQDLLVSAITITGERKA--SMDFTEPYFEATQLVVLPKGKTLDSTDALRNMKVSVL 151 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 G+T + A + FE + +A GD + N Sbjct: 152 TGSTGDTVAQKLMGA--TSTNIKRFETLPLALKELENGGVEACIGDNGVVANYVANNSGT 209 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 VI K A+ +G+ E ++ Sbjct: 210 EFTVIDNLEFDKEYYGMAVRKGNAELLEKLN 240 >gi|254253099|ref|ZP_04946417.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] gi|124895708|gb|EAY69588.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] Length = 259 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 78/220 (35%), Gaps = 13/220 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ GI F G +GFDVD A+ + + K ++ ALQ+ Sbjct: 26 TLRFGIEAAYPPFESKTPAGQLQGFDVDIGNAVCAKL---NMKCVWVENAFDGLIPALQA 82 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153 ++ D+++ + T R+ + F P Y I + + + L G + V G Sbjct: 83 RKFDVINSAMNITAKRK--QSIDFTPAIYVVPIVMIARRGSPLRPDAASLRGKHVGVLQG 140 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 + E L ++ + + ++ ++I A A R DA + L + Sbjct: 141 ASQEDFLKAHWANAGVS--VVSYQDQDQIYADLVAGRLDAAVQEAQTAQDGFLDKPAGRD 198 Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248 + I+ + + + +GD V A+ Sbjct: 199 YQIVGEPLKDPATLGEGTGFGLRKGDGALRAKVVGALDAL 238 >gi|194468077|ref|ZP_03074063.1| extracellular solute-binding protein family 3 [Lactobacillus reuteri 100-23] gi|194452930|gb|EDX41828.1| extracellular solute-binding protein family 3 [Lactobacillus reuteri 100-23] Length = 263 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 65/215 (30%), Gaps = 18/215 (8%) Query: 1 MY--KDFFVSILCLIILFFTS----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K ++I+ L + + ++++ ++ +G L G+ ++ N Sbjct: 1 MKFWKKALLTIVALTVGTSAGITSVSAASSAVNSELVHKGELTIGLEGTYSPYSYR-KNN 59 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GF+VD +A++ + ++P L S + D++ N T R Sbjct: 60 KLTGFEVDLGKAVAKKMGLKA---NFVPTKWDSLIAGLGSGKFDVVMNNITQTPERAK-- 114 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F I+ I S+ + G I GT + K + Sbjct: 115 QYNFSTPYIKSRFALIVPTDSNIKSLKDIKGKKIIAGTGTNNANVVK------KYKGNLT 168 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + R A YA N Sbjct: 169 PNGDFASSLDMIKQGRAAGTVNSREAWYAYSKKNS 203 >gi|86360162|ref|YP_472051.1| amino acid ABC transporter substrate-binding protein [Rhizobium etli CFN 42] gi|86284264|gb|ABC93324.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 268 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 82/266 (30%), Gaps = 19/266 (7%) Query: 1 MYKDFFVSIL---CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + ++L ++ + + ++R ++ + F + AN + Sbjct: 1 MLRISIQTLLRGALMLGAVGVVLGVASPLPVAAQERMPMRVAVEGAFPPFNYLDANNKLQ 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D AL + Q++ + L + + D + + +L R +A Sbjct: 61 GFDIDIANALCE---TGKFECQFIIEKWDDMIPDLVAGKYDAIISSMSMSLER--RQKVA 115 Query: 118 FRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y FI K I+ S + LSG + V + T E ++ V Sbjct: 116 FTEKYYNSPSVFIARKDSPITDVSPAALSGKKLGVTSSTAQESYANHFYP----DMKKTV 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-----LPDIISKSPLAPAI 230 F E+ R D D A+Y + + A+ Sbjct: 172 FRSSPELYKGLSDGRVDIILEDKLAIYDWIANTKAGTCCAFKGPDLVDVTYFGEGAGIAV 231 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGI 256 D + ++ + + Sbjct: 232 RLDDKDRLARLNEALKTIKEDGTYDM 257 >gi|257438674|ref|ZP_05614429.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Faecalibacterium prausnitzii A2-165] gi|257198903|gb|EEU97187.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Faecalibacterium prausnitzii A2-165] Length = 282 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 88/269 (32%), Gaps = 36/269 (13%) Query: 1 MYKDFFVSI----LCLIILFFTSFS-----------------TNASILGDIKKRGFLKCG 39 M + F+S+ +L + S ++A L I+ G L Sbjct: 1 MKRRTFISMMSVMAAAGVLTLSGCSNSSTSTAASSGASSAAGSSADQLAAIQASGKLIVA 60 Query: 40 INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 + ++ + G+DV+ RA++ + +P Y+ + F L + + D+ Sbjct: 61 LEGAWQPWSYHDESDTLVGYDVEVSRAIAEKLGVEPE---YVESDWDSLFAGLDAGRFDM 117 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTEL 158 + + T R +L F + + K I + L G + +T Sbjct: 118 VCNGVEVTDER--ALTYDFTTPYGYIHTALAVRKDNDEIKTFEDLKGKTTANSLASTYME 175 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 LA+ + A + +EE A R DA + Y + + I+ Sbjct: 176 -LAESYGA-----TVQGIDTLEETIQLLAAGRIDATLNADVSFYDYLNVHPDA-DFKIVA 228 Query: 219 DIISKSPLAPAIIQGDTE--WYNIVSWTH 245 S +A + +GD V+ Sbjct: 229 QTEDASHVAIPLRKGDNSATLLEAVNNAI 257 >gi|153009784|ref|YP_001370999.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151561672|gb|ABS15170.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 265 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 75/245 (30%), Gaps = 22/245 (8%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 SI+ + + + L L G A+G GF+V+ +AL Sbjct: 12 SIIAMALSLGAGIAHGEEPL-------KLIIGTEGANPPMNYQLADGTLAGFEVEIAKAL 64 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + ++ + + + A+QS + D + T R+ + F + Sbjct: 65 CDQM---KAQCEIVAQDWDGAIPAIQSGKFDAFIASMSITEERKK--QVDFSNKYFNPPP 119 Query: 128 GFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 G + K I + L+G ++ VQ TT YF + +E Sbjct: 120 GMVALKDSDIKGVTKDDLAGKTVGVQGSTTHANYAEAYF----TDSTVKAYPTSQEFKLD 175 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL----APAIIQGDTEWYNIV 241 R DA D +L T + +I AI +G E + Sbjct: 176 LVNGRLDAINDDSVSLAEWLKTPEGACCKMIGTYPPVAQYHGAGVGAAIKKGRPELVSKF 235 Query: 242 SWTHY 246 + Sbjct: 236 NEAIK 240 >gi|15595511|ref|NP_249005.1| L-cysteine transporter of ABC system FliY [Pseudomonas aeruginosa PAO1] gi|254237452|ref|ZP_04930775.1| hypothetical protein PACG_03527 [Pseudomonas aeruginosa C3719] gi|254243412|ref|ZP_04936734.1| hypothetical protein PA2G_04226 [Pseudomonas aeruginosa 2192] gi|9946160|gb|AAG03703.1|AE004469_8 L-cysteine transporter of ABC system FliY [Pseudomonas aeruginosa PAO1] gi|126169383|gb|EAZ54894.1| hypothetical protein PACG_03527 [Pseudomonas aeruginosa C3719] gi|126196790|gb|EAZ60853.1| hypothetical protein PA2G_04226 [Pseudomonas aeruginosa 2192] Length = 256 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 34/239 (14%), Positives = 68/239 (28%), Gaps = 19/239 (7%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 L+++ + +A +L D+ +RG L+ + F + G GF+ + L++ Sbjct: 7 LLMLVSLAAPLAHAELLDDVHQRGALRIALEGTYPPFNFKQG-GKLTGFETELGELLAAE 65 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + P ++ LQS + DI R F I Sbjct: 66 LAVKPE---FVTTEWSGILAGLQSGKYDIALNQVSVNEQRRKV--FDFSEPYTISSAQLI 120 Query: 131 MHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + + S+ L G + V GT + + E + Sbjct: 121 VRADETRQFKSLEDLKGLKLGVGQGTNYADLAKSVA-----GVNVRTYPGAPEYLQDLAS 175 Query: 189 HRCDAYTGDISA--LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R DA D + + P P + + ++ ++ Sbjct: 176 KRIDAALNDRLLIPFAIREAKLPVKPGAAVGPVANMAIPY----RKNNPKFGEALNAAL 230 >gi|261339786|ref|ZP_05967644.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Enterobacter cancerogenus ATCC 35316] gi|288318620|gb|EFC57558.1| lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT [Enterobacter cancerogenus ATCC 35316] Length = 257 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 83/251 (33%), Gaps = 25/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L + + SFS+ A+ L+ G+ F A+G+ +GFD Sbjct: 1 MK----LRALVVGMGLLCSFSSFAAT--------ELRYGLEAEYPPFESRNASGELEGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A+ A K ++ + L SK+ D ++ + T RE + F Sbjct: 49 VELGNAICKAA---ALKCSWVETSFDALIPGLVSKKFDAINSAMNITAQREK--SIDFTQ 103 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + I + L G +I V G+ E ++++ + ++ Sbjct: 104 PIYRIPSQLVGKAGSAIDATPEGLKGKTIGVLQGSIQETYAKEHWEKQG--VTVVSYKDQ 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGD 234 R DA +A A L+ + + +S + + +GD Sbjct: 162 NMAWGDLLNGRIDASLVMSAAGQAGFLSKPQGKGFGFIGKPVSDDTILGSGIGFGLRKGD 221 Query: 235 TEWYNIVSWTH 245 + Sbjct: 222 EATKKQLDAAI 232 >gi|325125966|gb|ADY85296.1| Glutamine ABC transporter permease protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 493 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 86/257 (33%), Gaps = 24/257 (9%) Query: 6 FVSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGFAE---VKA 52 ++L L LF + + +++ IKK G L G++ V Sbjct: 1 MTALLLLAGLFTAAIPAVDAASSRKVASGTVMKKIKKSGKLVVGLSADYPPLEFTKNVNG 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 + G DV+ + ++ + ++ + +AL++ +ID++ T R+ Sbjct: 61 KNKYVGVDVELAKQIAKDLGVK---LEIKNMGFDSLLVALETGKIDVIISGMTPTAERKK 117 Query: 113 SLGLAFRPITY---FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + F I Y D K +S + G ++ Q G+ +L + Sbjct: 118 --SIDFSKIYYAEKSDYFVISKTNKAKYTSTASFKGKTVGAQTGSLQYTSLKKNAAKSGI 175 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 K + + A ++ + DA TND V ++ A Sbjct: 176 KVKGLAKISN--LLMALKSGKVDAVLLGE-LNAKTYTTNDTSLSLVKSSLSQAQMGNAVG 232 Query: 230 IIQGDTEWYNIVSWTHY 246 + +G + ++ T Sbjct: 233 VAKGQGDLVKAINKTIN 249 >gi|296119655|ref|ZP_06838213.1| serine/threonine-protein kinase PknD [Corynebacterium ammoniagenes DSM 20306] gi|295967538|gb|EFG80805.1| serine/threonine-protein kinase PknD [Corynebacterium ammoniagenes DSM 20306] Length = 288 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 38/272 (13%), Positives = 82/272 (30%), Gaps = 25/272 (9%) Query: 1 MYKDFFVSILCLIILFFTSF---STNASILGDIK-------------KRGFLKCGINTGL 44 M ++ + +L +I + G L G N Sbjct: 1 MKYKVLAALASVTVLSGCVTNSEPALPDGWEEITPERVDAIAAMVDDEDGVLTAGTNPPF 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F G+ G ++D RA++S + D ++ + ++Q Q+DI Sbjct: 61 APFEFKDDAGNIVGVEMDLARAMASVMGLDFQPVE---QDFAMILPSIQGGQLDIGVSGF 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL-TLADY 163 T R F Y Q G ++ VQ T +E + Sbjct: 118 TDTEER--RQNFDFVNYLYAGIQWAQPTSTSKDVDPENACGLTVAVQRTTVSETDDVRPK 175 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + + ++ + A R DA + D N + ++ ++ Sbjct: 176 AAECDGDLEILSYDTSDNAAIAALTGRADALSADSPVTA--YAVNRSDGQLEMVGEMFDA 233 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 +P A+ + D+++ ++ ++ + Sbjct: 234 APYGMAVAK-DSDYGPAMAAALQHLIDTGDYA 264 >gi|222153290|ref|YP_002562467.1| glutamine ABC transporter glutamine-binding protein/permease [Streptococcus uberis 0140J] gi|222114103|emb|CAR42546.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus uberis 0140J] Length = 724 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 68/210 (32%), Gaps = 15/210 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K VS+L ++ F S I + +T F ++ +KG D Sbjct: 1 MKKILKVSLLAMLAPLFFMGS--------IVSAETITIVSDTAYAPFEYKDSDQVYKGID 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ D + A+QS Q + L T T R+ F Sbjct: 53 VDIINEVAKRQNWD---FKMTFPGFDAAVNAVQSGQANALMAGTTITEDRQKV--FHFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K K I S L G S+ V+ GT + L + + + F+ + Sbjct: 108 PYYDTKIVIATQKAKPIKSYKALKGKSVGVKNGTAAQSFLDKHKEKYGYS--VKTFDTGD 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + DA D + N Sbjct: 166 LMYNSLSSGSIDAVMDDEPVIQFAIKQNQD 195 Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 35/241 (14%), Positives = 70/241 (29%), Gaps = 13/241 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 S + +K++ + ++ F G++ G D++ +A++ Sbjct: 254 SLASTGDASKKATPVKEKYKIVA--DSSFAPFEFQNDKGEYVGIDMELIKAIAKQ---QG 308 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 I+ A+QS Q D T R+ F Y + Sbjct: 309 FTIEIANPGFDAALNAVQSGQADAAIAGMSITDQRKEI--FDFSDSYYTSKILLGVKSGS 366 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 ISS L G ++ + GT + L Y F+ + + + A Sbjct: 367 KISSYKDLKGKTVGAKKGTASYDFL--DNNKDKYNYSLKAFDEASSMYDSLNSGSIVALM 424 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254 D LK + + A+ + + E + + A+ + E Sbjct: 425 DDE---AILKYAIQQGRQFETPIKGEPSGEYGFAVKKGSNPELIEMFNNGLAALKKSGEY 481 Query: 255 G 255 Sbjct: 482 K 482 >gi|104781005|ref|YP_607503.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas entomophila L48] gi|95109992|emb|CAK14697.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas entomophila L48] Length = 260 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 85/256 (33%), Gaps = 22/256 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V + L A+ + K+ ++ G+ F V A+G +GFD Sbjct: 4 MRKRLGVLLFSLC----------ATTVSQAKEWTEIRFGVYPEYPPFESVAADGSLQGFD 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ A+ + + K ++ AL++++ D + + T R + F Sbjct: 54 IELGNAICTKL---QVKCTWVHNEFDGMIPALRARKFDAIMSSMAVTPAR--LKQIDFTN 108 Query: 121 ITY-FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + + SV L G + V G+ E ++ Sbjct: 109 KLFLSPTSVIVRRSAEFGDSVESLKGKQVGVLQGSLQEAYARAVLAPLG--AQVKAYQAQ 166 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP---DIISKSPLAPAIIQGDTE 236 ++ A R DA D L+ ++ P D +A + + D E Sbjct: 167 DQNYADLMNGRLDATVTDKLEAQLNFLSKPEGADFKSGPAIKDPTLPLDIAMGLRKTDPE 226 Query: 237 WYNIVSWTHYAMVTAE 252 ++ A++ A+ Sbjct: 227 LKALLDKGI-ALIHAD 241 >gi|157164859|ref|YP_001466155.1| solute-binding family 1 protein [Campylobacter concisus 13826] gi|112800372|gb|EAT97716.1| L-cystine-binding protein TcyA [Campylobacter concisus 13826] Length = 250 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 78/242 (32%), Gaps = 17/242 (7%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 F I I F + + NAS + K+G L ++ G+ G+DVD + Sbjct: 3 FKPIFGFIAGAFLALNLNASTI----KKGELIVATEGTYSPYSFYDEKGELVGYDVDIAK 58 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++ + KI++L A + + D++ R+ Sbjct: 59 AVAKKL---NLKIEFLTAPWDAMLAAFDAGKADVVFNQVSINEDRKK--KYDMSVPYTMP 113 Query: 126 GQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 ++HK I S + L G V + T+ +A+ A +V + + Sbjct: 114 YPVIVVHKDNNDIKSFADLKGKKS-VHSATSNWAAIAEKNGA-----TVVVADGFSKGVE 167 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + R D D + I P A + +G+TE ++ Sbjct: 168 LIISKRADDTINDNVTFFDYIKQRPNAP-LKIAYTSNEPMPTAALLKKGNTELLEAINKA 226 Query: 245 HY 246 Sbjct: 227 LN 228 >gi|29375478|ref|NP_814632.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis V583] gi|227555005|ref|ZP_03985052.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|255973964|ref|ZP_05424550.1| amino acid ABC transporter [Enterococcus faecalis T2] gi|257086232|ref|ZP_05580593.1| amino acid ABC transporter [Enterococcus faecalis D6] gi|257418488|ref|ZP_05595482.1| ABC amino acid transporter [Enterococcus faecalis T11] gi|307278411|ref|ZP_07559486.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|307286701|ref|ZP_07566787.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|29342938|gb|AAO80702.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis V583] gi|227175864|gb|EEI56836.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|255966836|gb|EET97458.1| amino acid ABC transporter [Enterococcus faecalis T2] gi|256994262|gb|EEU81564.1| amino acid ABC transporter [Enterococcus faecalis D6] gi|257160316|gb|EEU90276.1| ABC amino acid transporter [Enterococcus faecalis T11] gi|306502179|gb|EFM71463.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|306504917|gb|EFM74112.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|315027079|gb|EFT39011.1| ABC transporter, permease protein [Enterococcus faecalis TX2137] gi|315165246|gb|EFU09263.1| ABC transporter, permease protein [Enterococcus faecalis TX1302] gi|315167972|gb|EFU11989.1| ABC transporter, permease protein [Enterococcus faecalis TX1341] gi|315574194|gb|EFU86385.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B] gi|315581663|gb|EFU93854.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A] Length = 487 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 36/234 (15%), Positives = 75/234 (32%), Gaps = 15/234 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDD 74 T + + I ++G L G++ + V GFD+ + ++ + Sbjct: 27 TFAAETDPVYDKIIQKGELVVGLSADYAPYEFHAKVDGEDKIVGFDISIAQKIADDLGVK 86 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ L AL++ +ID++ T R + F Q I+ K+ Sbjct: 87 ---LKIEELGFDALLGALKTGKIDMVISGMSPTPERLKEVA--FSQPYMNVQQRVIVRKE 141 Query: 135 --KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 S G Q TT E + P +++ ++ + ++ D Sbjct: 142 DKDKFHSTKDFEGVRAGAQKQTTQEELIKTEL----TGAVPTSLQKIPDLIMNLKNNKLD 197 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 A + A N+ + + + SK A A + V+ + Sbjct: 198 AVVMEEPVGEAYVSQNEDLAFADVTFEKGSKD-TAVAFPKDAPVLTEKVNASIK 250 >gi|257460120|ref|ZP_05625224.1| L-cystine-binding protein TcyA [Campylobacter gracilis RM3268] gi|257442561|gb|EEV17700.1| L-cystine-binding protein TcyA [Campylobacter gracilis RM3268] Length = 247 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 73/252 (28%), Gaps = 25/252 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F ++L ++ T +A L + G L ++ + GFD Sbjct: 1 MK--IFKALLATALITATL---SAKTLKE----GTLVIATEGTYSPYSFYDEKNNLTGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RAL+ + +L A + + DI T R+ F Sbjct: 52 VDIARALAKELGLKAE---FLTAPWDAMLAAFDAGKADIAMNQVSITQERKK--KYNFSE 106 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ I S + L G + + AD +++ + + Sbjct: 107 PYTVAYAALVVRADNEEIKSFADLKGKK----SVHSATSNWADMARSYG--AEIVTADGF 160 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWY 238 + A R DA D + + P + +++ D E Sbjct: 161 SKGVELIIARRADATINDNITFFDYMKQRPNAPLKIA---AQGNEPIYSAVLLKKDDELT 217 Query: 239 NIVSWTHYAMVT 250 ++ ++ Sbjct: 218 AQINSALKSLKQ 229 >gi|258545836|ref|ZP_05706070.1| histidine ABC superfamily ATP binding cassette transporter, histidine-binding protein HisJ [Cardiobacterium hominis ATCC 15826] gi|258518852|gb|EEV87711.1| histidine ABC superfamily ATP binding cassette transporter, histidine-binding protein HisJ [Cardiobacterium hominis ATCC 15826] Length = 256 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 90/263 (34%), Gaps = 24/263 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++I + + + L + F+E+ ++G GFD Sbjct: 1 MKK--LLAIALCAGFAGNALAADKP----------LIFSTDGTYPPFSEMGSDGQMTGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + + ++ P++ + ALQ+K+ID++ + + T R +AF Sbjct: 49 IDIGKALCEQMKRE---CRFEPIDWEGLIPALQTKKIDVILASMNDTPER--RESIAFTD 103 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + F+ + I + + G + V + + + F N + Sbjct: 104 PYYSNPGLFVRAEGSKIEPTPEGVKGKVVGVLRASIFDNYVTAKFPDAN----IQRYTSQ 159 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 EE + A R D D + L D I + I G + N Sbjct: 160 EEANQDALAGRVDLLFADKIVMEDGFLQRDEGKGFEIAGETNDPEYFGAGISIGVRKDDN 219 Query: 240 IVSWTHYAMVTA--EELGITQKN 260 + A + A E + N Sbjct: 220 ALREELNAALKAIKENGAYKKVN 242 >gi|257125597|ref|YP_003163711.1| extracellular solute-binding protein family 3 [Leptotrichia buccalis C-1013-b] gi|257049536|gb|ACV38720.1| extracellular solute-binding protein family 3 [Leptotrichia buccalis C-1013-b] Length = 252 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 93/262 (35%), Gaps = 29/262 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + + S S K L G N F + NG+ GFD Sbjct: 1 MKKLLLIITMAIFGIV----SWGESKTETKKDEKKLIVGTNGVFPPFEYM-ENGELVGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + + I+ +L++ ++D + T R+ + F Sbjct: 56 IDLIKQIGKNLGYE---IEMKSQPFDALIPSLKAGKLDAIISGITVTEARKRL--VDFTD 110 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q ++ K ++S LSG + VQ GT E F+A+ +K ++ Sbjct: 111 EYFNSTQVYLRKKGNIAVNSKESLSGKKVGVQLGTIQE------FEANKIKNVNVITNDA 164 Query: 180 E-EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I + + DA + + A++ P + + K P AI + Sbjct: 165 TVNIILDLKNGKTDAVILEN--IVAMEFMKKNPDIEIFYEE---KLPYGMAIAFDKGKHS 219 Query: 239 NIVSWTHYAMVTAEELGITQKN 260 ++ + EEL Q+N Sbjct: 220 ELIKKIN------EELKKLQEN 235 >gi|254509081|ref|ZP_05121184.1| cyclohexadienyl dehydratase [Vibrio parahaemolyticus 16] gi|219548014|gb|EED25036.1| cyclohexadienyl dehydratase [Vibrio parahaemolyticus 16] Length = 258 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 79/245 (32%), Gaps = 14/245 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K F + L +L T + S L +I + G L+ G ++GF Sbjct: 1 MRKLIF--AVGLWLLALTQLAYADSRLHEILENGVLRVGTTGDWNPMTMKDPATNSYRGF 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D L+ + + ++++ + K + + + D ++ + + R G + Sbjct: 59 DIDVTTELAKDLGVE---VEFVATDWKTLVNGITANKYD-ITGSASLNMSRAKVAGYSQP 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 S + + GT E + D+F + IV E Sbjct: 115 YFYLAFVPVVQKKDLAKFSDWADFDKPDVKVAATLGTVQEKMVKDFFPSAQH----IVIE 170 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A R D L + V + + +P+A + Q D W Sbjct: 171 APARDFQELLARRADVSVTSNVEAATLVEKFKQ-LAIVPVKEPRKPTPIAMLLPQDDQVW 229 Query: 238 YNIVS 242 N ++ Sbjct: 230 INYIN 234 >gi|116254360|ref|YP_770198.1| solute-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115259008|emb|CAK10117.1| putative solute-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 257 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 68/231 (29%), Gaps = 14/231 (6%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 L IK G K G F +G GFDV+ A+++ + ++ Sbjct: 23 AGENLAAIKSAGVFKIGTEGTYAPFTYHDESGKLVGFDVEIGEAIAAKLGVKAE---FVE 79 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVS 141 L +K+ D + T R+ F I I S + Sbjct: 80 GKWDGLIAGLDAKRYDTVINQVGITETRK--QKYDFSEPYIASKAVLIARDGDDSIKSFA 137 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G Q+ T+ LA A + + ++ R DA D + Sbjct: 138 DLKGKK-AAQSLTSNFGKLATEAGA-----ELVGTDGFDQSIQLVLTKRADATINDSLSF 191 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 K I+ + + I + + E ++ A + A+ Sbjct: 192 LDFKKHKPDAPV-KIVAEQENADYSGIIIRKNEPELLAEINKAL-ADIKAD 240 >gi|238784073|ref|ZP_04628088.1| Glutamine-binding periplasmic protein [Yersinia bercovieri ATCC 43970] gi|238715050|gb|EEQ07047.1| Glutamine-binding periplasmic protein [Yersinia bercovieri ATCC 43970] Length = 247 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 76/220 (34%), Gaps = 13/220 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 L +T V F + + + GFD+D A++ + P++ A Sbjct: 23 AEKELIVATDTAFVPFEFKQGD-KYVGFDIDLWDAIAKKLDVKY---TLKPMDFSGIIPA 78 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICV 150 LQ+K +D+ T R+ + F Y G ++ I + L G + V Sbjct: 79 LQTKNVDLALAGITITDERKK--AVDFSDGYYNSGLLVMVKADNNDIKGEADLQGKVVAV 136 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++GT + DY KA+ F ++ R DA D + T Sbjct: 137 KSGTGSV----DYAKANIKTKDLRQFPNIDNAYLELGTGRADAVLHDTPNILYFIKTAGN 192 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + + D I A QG ++ + V+ ++ Sbjct: 193 G-QFKAVGDSIKAQQYGVAFPQG-SDLRDKVNVALKSLKE 230 >gi|239630683|ref|ZP_04673714.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526966|gb|EEQ65967.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 485 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 106/337 (31%), Gaps = 44/337 (13%) Query: 1 MY-----KDFFVSILCLIILFFTSFS-------TNASILGDIKKRGFLKCGINTGLVGFA 48 M K + ++ + L+ + + + L I+KRG+L G++ Sbjct: 1 MKHMRGIKHWAMAFIALVAMLVGFAANQPVPTAAASEDLAAIQKRGYLVVGLSADYAPLE 60 Query: 49 E---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 + G D+ + ++ + +Q +N AL++ +ID++ Sbjct: 61 FHATLNGADTIVGADISMSKQIAKDMGVK---LQIKEMNFTALIGALKTGKIDLIVSGMS 117 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADY 163 T RE + F ++ Q ++ K S++ SG + Q TT E Sbjct: 118 KTPEREK--EVNFSTPYLYETQVMVIRKADKAKYKSIADFSGKKVGAQKQTTQEQLAKTQ 175 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 ++ ++ A ++ D + + K Sbjct: 176 LP----GAKISSLDKANDVIAQVSYNKLDGAVLASTIADSYVARTPSLMVLNP-HFATPK 230 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP----------DV 273 +P A A+ + ++ V+ T + A+ Q ++ + + Sbjct: 231 APTAIAVSKQNSALLAQVNKTISKVKGAKYKTYLQAAYKLQDQNQSFWAKYGNYFLRGAL 290 Query: 274 QRFLGIDKSSNIGEALG-------LTKDWTYRIIRHM 303 + + G +G L+ W + I ++ Sbjct: 291 YTLIFAVLTVFFGTVIGTLLALMKLSHSWFAKAIANV 327 >gi|251795091|ref|YP_003009822.1| extracellular solute-binding protein family 3 [Paenibacillus sp. JDR-2] gi|247542717|gb|ACS99735.1| extracellular solute-binding protein family 3 [Paenibacillus sp. JDR-2] Length = 286 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 41/277 (14%), Positives = 92/277 (33%), Gaps = 39/277 (14%) Query: 2 YKDFFVSILCLIILFFTSF---------------STNAS--------ILGDIKKRGFLKC 38 K + ++++ + + +A L DIKK G + Sbjct: 4 KKSLVFILTLVVVVTLAACGGKNNANNSSSNETPAASADNGAAEATGKLADIKKAGKIVL 63 Query: 39 GINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 G + + V GFD++ + ++ + D ++ ++ L+ Sbjct: 64 GTSAEYAPYEFHKNVDGKDQIVGFDIEIAKEVAKDLGVD---LEIKDMDFGNLLAELKLG 120 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAG 153 +ID + R + F + Y QG ++ + ++++ L G +I VQ G Sbjct: 121 KIDFVIAGMTPDEERAK--AVDFSKVYYEAKQGVLVRAEDKDKFTTMADLEGKAIGVQMG 178 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 +T E A + ++ ++ + DA ++ N + Sbjct: 179 STQEKIAQGIKGAK-----LKSLGKTTDLVLELKSKKVDALIVELPVAQGYANVNSDLAL 233 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 I P+ S A A+ +G+ + + T + Sbjct: 234 TSISPEYESGGS-AVAVNKGEKDLLAEIQKTLDHLTA 269 >gi|226311779|ref|YP_002771673.1| amino acid ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] gi|226094727|dbj|BAH43169.1| amino acid ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] Length = 272 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 77/267 (28%), Gaps = 32/267 (11%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNASILGD---------------IKKRGFLKCGINTG 43 M K ++ + L + S AS K+ G + Sbjct: 1 MKKTWKTIAGVVFSLSLLVSGCSQGASTNSAGGQAGGATAGNASSMTKEAGVFVYAASGE 60 Query: 44 LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F+ +G GFDV+ ++ + +P + ++ + D + Sbjct: 61 YQPFSYF-KDGQLTGFDVEIGNEIAKRLGLEPKPVT---SPFSGIIAGVKEGRYDAAIAS 116 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R + F Y G + IS++ L G + V GTT E + Sbjct: 117 HAITEER--KQQVDFADPYYLSGGQLFVRPDGTISTLEGLKGKEVAVALGTTHEKMARE- 173 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + ++ A + D D + +S+ Sbjct: 174 -----YTDNIKTYDSDVTALRALEQGKHDVVITDSVVGEIAIAQ---GLKLKKSGSPLSE 225 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A+ +G+TE N ++ M+ Sbjct: 226 VKHGIAVRKGNTELLNKINEVLKQMME 252 >gi|254245852|ref|ZP_04939173.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] gi|124870628|gb|EAY62344.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] Length = 333 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 65/205 (31%), Gaps = 9/205 (4%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F +G GFD+D A+ + + +K ++ + ALQ Sbjct: 114 KEIRFGVEASYAPFEYKTPDGKLTGFDIDIGNAVCTKL---KTKCVWVENDFDGLIPALQ 170 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152 +++ D ++ + T R +AF Y I + G + + L G + V Sbjct: 171 ARKFDAINSDMTITEQR--KHAIAFTDPIYTIPNQLIAKQGSGLLPTPQSLKGKRVGVLQ 228 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA-YTGDISALYALKLTNDRP 211 GT E + + ++ + A ++ R DA + + Sbjct: 229 GTIQEAYAKKKWAPAG--VEVVPYQTQDLAYADLKSGRLDATFQDSEAGSKGFLTKPQGQ 286 Query: 212 SEHVILPDIISKSPLAPAIIQGDTE 236 + L + Sbjct: 287 GFAFAGGTVSDTEILGLGRRLRPAQ 311 >gi|281492351|ref|YP_003354331.1| glutamine ABC transporter permease/substrate-binding protein [Lactococcus lactis subsp. lactis KF147] gi|281376015|gb|ADA65506.1| Glutamine ABC transporter, permease and substrate-binding protein [Lactococcus lactis subsp. lactis KF147] Length = 714 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 35/250 (14%), Positives = 74/250 (29%), Gaps = 17/250 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K FF + L + + + +K +K ++ F W G D Sbjct: 1 MKKLFFALAMMLATVTAFLVAPS------VKAETTVKIASDSSYAPFEFQNGQKKWVGID 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + K++ L++ Q+D + T R+ + F Sbjct: 55 VDIMQEVAK---INDWKLEMSYPGFDAALQNLKAGQVDGVIAGMTITDERKET--FDFSN 109 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K +S S L G ++ + GT + L + K + + Sbjct: 110 PYYTSALTIATTKDSKLSDYSDLKGKAVGAKNGTAAQTWLQENQKKYGY--IIKTYSDGV 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + AA + ++ + + + P + + Sbjct: 168 HMFAALSSGNIAGAMDEVPVISYAMKQGQD----LAMNFPSISLPGGYGFAVMKGKNSTL 223 Query: 241 VSWTHYAMVT 250 V + A+ Sbjct: 224 VDGFNKALAE 233 Score = 93.2 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 66/220 (30%), Gaps = 9/220 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 K+ + F + + G DVD A++ + K+++ + + + Sbjct: 258 KKDVYTIASDNSFAPFEFQNDDKQFTGIDVDLLNAIAK---NQGFKLKWNFIGFQAAVDS 314 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 +QS D + T R+ P + I S L G ++ + Sbjct: 315 VQSGHADGMMSGMSITDARKQVFDYG-SPYYSSNLTIATSSTDDSIKSWKDLKGKTLGAK 373 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 GT + L + K + F + ++ +A D + K + Sbjct: 374 NGTASFDYLNAHAKEYGY--TVKTFTDATTMYSSLNNGSINALMDDEPVI---KYAIKQG 428 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 + I A+ +G+ + A + A Sbjct: 429 QKFATPIKPIPDGQYGFAVKKGNNPELIEMFNNGLANLRA 468 >gi|191639757|ref|YP_001988923.1| ArpJ protein [Lactobacillus casei BL23] gi|190714059|emb|CAQ68065.1| ArpJ protein [Lactobacillus casei BL23] gi|327383870|gb|AEA55346.1| Amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus casei LC2W] gi|327387051|gb|AEA58525.1| Amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus casei BD-II] Length = 482 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 106/324 (32%), Gaps = 36/324 (11%) Query: 6 FVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKG 58 F++++ +++ F + + L I+KRG+L G++ + G Sbjct: 11 FIALVAMLVGFAANQPVPTAAASEDLAAIQKRGYLVVGLSADYAPLEFHATLNGADTIVG 70 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D+ + ++ + +Q +N AL++ +ID++ T RE + F Sbjct: 71 ADISMSKQIAKDMGVK---LQIKEMNFTALIGALKTGKIDLIVSGMSKTPEREK--EVNF 125 Query: 119 RPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 ++ Q ++ K S++ SG + Q TT E Sbjct: 126 STPYLYETQVMVIRKADKAKYKSIADFSGKKVGAQKQTTQEQLAKTQLP----GAKISSL 181 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ ++ A ++ D + + K+P A A+ + ++ Sbjct: 182 DKANDVIAQVSYNKLDGAVLASTIADSYVARTPSLMVLNP-HFATPKAPTAIAVSKQNSA 240 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP----------DVQRFLGIDKSSNIG 286 V+ T + A+ Q ++ + + + + G Sbjct: 241 LLAQVNKTISKVKGAKYKTYLQAAYKLQDQNQSFWAKYGNYFLRGALYTLIFAVLTVFFG 300 Query: 287 EALG-------LTKDWTYRIIRHM 303 +G L+ W + I ++ Sbjct: 301 TVIGTLLALMKLSHSWFAKAIANV 324 >gi|168187334|ref|ZP_02621969.1| amino acid ABC transporter, substrate-binding protein [Clostridium botulinum C str. Eklund] gi|169294780|gb|EDS76913.1| amino acid ABC transporter, substrate-binding protein [Clostridium botulinum C str. Eklund] Length = 280 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 45/263 (17%), Positives = 91/263 (34%), Gaps = 29/263 (11%) Query: 2 YKDFFVSILCLIILFFTSF-----------STNASIL---GDIKKRGFLKCGINTGLVGF 47 + I+C +IL + + + L IKK G L G + Sbjct: 3 KRKKIKFIICGLILTMGATLFVGCGNKNKDAKDGKKLTKIEQIKKSGKLVLGTCADYPPY 62 Query: 48 AE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 + G D+D + ++ + ++ ++ L+++S +ID++ Sbjct: 63 EAQQVKDGKPEIVGIDIDIAKEIAKDLGVK---LEIKDMDFDPLVLSVKSGKIDMVISGM 119 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLAD 162 + T +RE + F I Y Q I+ + ++SV LSG + Q + E + Sbjct: 120 NPTPVREK--EIDFSKIYYRAAQSVIIRDEDKSKLTSVQSLSGKKVGAQITSLQEKIAKE 177 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 K + +V E+ + + + DA + A + + Sbjct: 178 EIK----GAKVVSLGKVNELVTSLKTKKVDAVIVEEPVAKAYVAKYP-GTTIANIKVGKP 232 Query: 223 KSPLAPAIIQGDTEWYNIVSWTH 245 A I +G+ E+ + V T Sbjct: 233 NEGSAVGIQKGNKEFVDSVDKTI 255 >gi|53715882|ref|YP_106605.1| glutamine ABC transporter periplasmic protein [Burkholderia mallei ATCC 23344] gi|67639609|ref|ZP_00438453.1| glutamine-binding periplasmic protein (GlnBP) [Burkholderia mallei GB8 horse 4] gi|121596704|ref|YP_990725.1| glutamine ABC transporter periplasmic protein [Burkholderia mallei SAVP1] gi|124381312|ref|YP_001025208.1| glutamine ABC transporter periplasmic protein [Burkholderia mallei NCTC 10229] gi|126447118|ref|YP_001079562.1| glutamine ABC transporter periplasmic protein [Burkholderia mallei NCTC 10247] gi|166998960|ref|ZP_02264810.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei PRL-20] gi|254177250|ref|ZP_04883906.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei ATCC 10399] gi|254203624|ref|ZP_04909985.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei FMH] gi|254205493|ref|ZP_04911846.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei JHU] gi|254356208|ref|ZP_04972485.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei 2002721280] gi|52421852|gb|AAU45422.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei ATCC 23344] gi|121224502|gb|ABM48033.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei SAVP1] gi|126239972|gb|ABO03084.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei NCTC 10247] gi|147745863|gb|EDK52942.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei FMH] gi|147755079|gb|EDK62143.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei JHU] gi|148025191|gb|EDK83360.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei 2002721280] gi|160698290|gb|EDP88260.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei ATCC 10399] gi|238520180|gb|EEP83642.1| glutamine-binding periplasmic protein (GlnBP) [Burkholderia mallei GB8 horse 4] gi|243064782|gb|EES46968.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei PRL-20] gi|261826254|gb|ABM99403.2| glutamine ABC transporter, periplasmic glutamine-binding protein [Burkholderia mallei NCTC 10229] Length = 250 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 93/283 (32%), Gaps = 39/283 (13%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + F +I+ L ++ ++ +A L G +T + F + + + GFD+ Sbjct: 3 RRSFIKTIVALALVGASAAGAHA---------KELVVGTDTSFMPFEFKQGD-KYVGFDL 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D ++ + P++ A Q++ ID+ R + F Sbjct: 53 DLWAEIAK---GAGWTYKIQPMDFAGLIPAQQTQNIDVALSGMTIKEERRK--AIDFSDP 107 Query: 122 TYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + I S+ L+G I + GT T D+ KAH F ++ Sbjct: 108 YYDSGLAAMVQANNTTIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A A R DA + + N+ + +S +G Sbjct: 164 QAYLALEAGRVDA-AMHDTPNVLFFVNNEGKGRVKVAGAPVSGDKYGIGFPKGSP----- 217 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKS 282 A V AE + ++ D + +++ G + Sbjct: 218 ----LVAKVNAE--------LARMKADGRYAKIYKKWFGSEPP 248 >gi|24372630|ref|NP_716672.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Shewanella oneidensis MR-1] gi|24346666|gb|AAN54117.1|AE015549_3 amino acid ABC transporter, periplasmic amino acid-binding protein [Shewanella oneidensis MR-1] Length = 244 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 68/219 (31%), Gaps = 17/219 (7%) Query: 31 KKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 K L G N F V + KGFD++ + ++ ++ + Sbjct: 23 KSEDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIELAKQIAKDAGK---TLKVENMKFDSL 79 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGAS 147 +AL S +ID ++ T R+ + F Y Q +++K I ++ + Sbjct: 80 IVALNSGKIDFIASGMTITPERQA--SVNFSEPYYEATQVLLVNKDNESIHTLDDIKDKH 137 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 VQ G+T + + F E + + D D Sbjct: 138 FAVQLGSTAD------MMSKKYTQKVTAFNTGFEAIMELKNGKVDLVLFDSEPAANYLAK 191 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 N + ++ A+ + E N ++ T Sbjct: 192 NP---DLKLIKLDFPPEFYGFAVSKQQPELLNSINHTLK 227 >gi|326384738|ref|ZP_08206415.1| amino acid ABC transporter membrane protein [Gordonia neofelifaecis NRRL B-59395] gi|326196546|gb|EGD53743.1| amino acid ABC transporter membrane protein [Gordonia neofelifaecis NRRL B-59395] Length = 485 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 70/236 (29%), Gaps = 16/236 (6%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRG--FLKCGINTGLVGFAEVKA-NGDWKGFD 60 +L ++ S G L+ G F+ G G+D Sbjct: 2 RALAPLLAVLFAVAGLLSACGGSDDRFGDNGGGVLRVGTEGTYAPFSFHDPATGQLSGYD 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + + +++ F AL + + D+++ T R+ L Sbjct: 62 VDVANAVAKQMG---MRAEFVEAPWDSLFAALGADRFDVVANQVTVTPERQAKYAL--ST 116 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I SV L G ++ Q T+ +A A E Sbjct: 117 PYAIGEGVVVTRSDDDSIRSVDDLGGRTVA-QTATSNWTQVAKDAGA-----DVQTVEGF 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + R R DA D A+YA S + + A A +G Sbjct: 171 TQAITLLRQGRVDATVNDSIAVYAYLAETGDTSVKIAAKTGQTSE-QAFAANKGSP 225 >gi|323127408|gb|ADX24705.1| cystine-binding protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 287 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 79/229 (34%), Gaps = 14/229 (6%) Query: 1 MYKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + + L L T+ ++ S IK++G LK + + + Sbjct: 1 MKKSVTLLSIGLASLLLTACASHQSQESSWDAIKEKGVLKVATPGTYQPTSFYNDDNELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G++VD + + + K++++ + F ++ S ++DI N D T R+ ++ Sbjct: 61 GYEVDMVKEIGKRL---DIKVKFVETGFDQAFTSVDSGRVDISLNNFDITPKRQKKYNIS 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIV 175 G + S LS A T + LA A + Y + Sbjct: 118 TPYKYGVGGM-IVRADGSSNMSKKDLSDWKGKKAAGASGTEYMKLAQKQGAKLVTYDNVT 176 Query: 176 FERVEEIDAAYRAHRCDAYTGDISAL--YALKLTNDRPSEHVILPDIIS 222 + R D D A + + + P+ +V + D+ Sbjct: 177 GDVY---LNDVANGRTDFIPNDYPAQKLFVDYMLSQNPNLNVKMSDVQY 222 >gi|320333239|ref|YP_004169950.1| ABC transporter periplasmic subunit [Deinococcus maricopensis DSM 21211] gi|319754528|gb|ADV66285.1| ABC-type transporter, periplasmic subunit family 3 [Deinococcus maricopensis DSM 21211] Length = 247 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 83/223 (37%), Gaps = 14/223 (6%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A L I+K G ++ G N F + + KGF+ D A++ + Q++ Sbjct: 15 QARDLAAIQKAGVIRIGTNAEFKPFTYYEGS-TMKGFEYDLGNAIAKKLGVKA---QWIN 70 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + L + D++ + T R+ + F ++ G I+ K G +V+Q Sbjct: 71 QPFDGLLIGLNQDRFDLVISSHGITPERQK--AVDFSNP-HYCSGGLIVSKTGGPKTVAQ 127 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G ++ Q GTT + + + A R +A + Y Sbjct: 128 LKGKTVSTQIGTTYVSAIEKQLG----NRAVKTYPDNSKALQALMMGRVNAMVNEK--FY 181 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 AL+ P + D++ + L A+ +G++ V+ Sbjct: 182 ALEAIKANPGQLQQ-GDLMFQEKLGMAVKKGNSGLLKAVNTAL 223 >gi|227532776|ref|ZP_03962825.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227189610|gb|EEI69677.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 482 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 107/324 (33%), Gaps = 36/324 (11%) Query: 6 FVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKG 58 F++++ +++ F + + L I+KRG+L G++ + G Sbjct: 11 FIALVAMLVGFAANQPVPTAAASEDLAAIQKRGYLVVGLSADYAPLEFHATLNGADTIVG 70 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D+ + ++ + +Q +N AL++ +ID++ T RE + F Sbjct: 71 ADISMSKQIAKDMGVK---LQIKEMNFTALIGALKTGKIDLIVSGMSKTPEREK--EVNF 125 Query: 119 RPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 ++ Q ++ K S++ SG + Q TT E Sbjct: 126 STPYLYETQVMVIRKADKAKYKSIADFSGKKVGAQKQTTQEQLAKTQLP----GAKISSL 181 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ ++ A ++ D + + K+P A A+ + ++ Sbjct: 182 DKANDVIAQVSYNKLDGAVLASTIADSYVARTPSLMVLNP-HFATPKAPTAIAVSKQNSA 240 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD--------------VQRFLGIDKS 282 V+ T + A+ Q ++ + + L + Sbjct: 241 LLAQVNKTISKVKGAKYKTYLQAAYKLQDQNQSFWAKYGNYFLRGTLYTLIFAVLTVFFG 300 Query: 283 SNIGEAL---GLTKDWTYRIIRHM 303 + IG L L+ W + I ++ Sbjct: 301 TVIGTLLALMKLSHSWFAKAIANV 324 >gi|167461578|ref|ZP_02326667.1| extracellular solute-binding protein family 3 [Paenibacillus larvae subsp. larvae BRL-230010] gi|322384241|ref|ZP_08057950.1| high affinity arginine ABC transporter binding lipoprotein-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321150889|gb|EFX44315.1| high affinity arginine ABC transporter binding lipoprotein-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 265 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 75/256 (29%), Gaps = 21/256 (8%) Query: 1 MYKDFFVSI-LCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAE---VKA 52 M K + L L G L + + V Sbjct: 1 MKKLAASVLSLVLAGSLIAGCGQKDKNAGDAASTAAPNGKLVLATSADYPPYEFHKLVDG 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 GFD++ + ++ + + ++ + ALQS DI+ T R+ Sbjct: 61 KDSIIGFDIEIAKEIAKDMGKE---LEVKDMRYDALLAALQSGTADIVIAGMTPTPERQK 117 Query: 113 SLGLAFRPITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + F I Y + K + L G I +Q G+ E A Sbjct: 118 --NVDFSDIYYTAQHAVVTLEENKDKYKNPEDLKGKKIVIQKGSIQEEIAKRIEGA---- 171 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 ++ ++ + R DA + A + ++ L + A AI Sbjct: 172 -DLQELGKIGDLIQELKNKRADASIIEKPV-AANYVKANKGLAITDLTLQAEDTGSAVAI 229 Query: 231 IQGDTEWYNIVSWTHY 246 +G+ E + V+ T Sbjct: 230 KKGNKELVDQVNKTLK 245 >gi|289549952|ref|YP_003470856.1| Cysteine ABC transporter, substrate-binding protein [Staphylococcus lugdunensis HKU09-01] gi|315659421|ref|ZP_07912284.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus lugdunensis M23590] gi|289179484|gb|ADC86729.1| Cysteine ABC transporter, substrate-binding protein [Staphylococcus lugdunensis HKU09-01] gi|315495540|gb|EFU83872.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus lugdunensis M23590] Length = 259 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 63/211 (29%), Gaps = 12/211 (5%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K +++ L+ + + +S LK G F G+D+D Sbjct: 2 KRLLFTVIALVFVLAACGNGGSSKDDKASSDKTLKVGTEGTYAPFTYHDKQDKLTGYDID 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +A++ A +++ + F L + + D+++ RE F Sbjct: 62 VIKAVAKAEGYK---LKFNETSWDSMFAGLDAGRFDVIANQVGINKERE--QKYQFSTPY 116 Query: 123 YFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + ++ +K I S + G + Q T+ LA A + + Sbjct: 117 TYSNAVLVVRDNEKDIKSFDDVKGKKLA-QTFTSNYGKLAKDKGA-----DITKVDGFNQ 170 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 ++R D D + Sbjct: 171 SMDLLLSNRVDGTFNDSLSYLDYTKQKPNAK 201 >gi|260494694|ref|ZP_05814824.1| amino acid-binding protein [Fusobacterium sp. 3_1_33] gi|260197856|gb|EEW95373.1| amino acid-binding protein [Fusobacterium sp. 3_1_33] Length = 242 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 83/256 (32%), Gaps = 23/256 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + ++ L+ + + K + G N F + GFD Sbjct: 1 MKKFFKLMLMSLLSVVISISVFA--------KSNVVYVGTNAEFAPFEYL-EKNKIVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+S + + + ALQ+K+ID++ T RE +AF Sbjct: 52 IDLLDAISKETG---LEFKIQDMAFDGLLPALQTKKIDMVIAGMSATPEREK--AVAFSK 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q I + S LSG + V G T + ++ F Sbjct: 107 PYFKAKQVVITKGVDKSLKSFKDLSGKKVGVMLGFTGDTVVSKI-----KGVKIERFNAA 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A ++ DA D A K T + + VI + A A + D E N Sbjct: 162 YAAILALSQNKVDAVVLDSE--PAKKYTANN-KQFVIANIPAEEEDYAIAFRKNDKELIN 218 Query: 240 IVSWTHYAMVTAEELG 255 V+ + E Sbjct: 219 KVNAALDKIKANGEYD 234 >gi|257876942|ref|ZP_05656595.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] gi|257811108|gb|EEV39928.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] Length = 493 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 85/263 (32%), Gaps = 22/263 (8%) Query: 1 MYK----DFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEV-- 50 M + + I+ ++ FF +A I +K+ G L G++ + Sbjct: 1 MKRFSKGTVLLGIITALLPFFFIGQAHAEETDPIYEKVKENGVLVVGLSADYAPYEFRAN 60 Query: 51 -KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 + G D+ + ++ + D ++ L AL++ +ID++ T Sbjct: 61 VDGKNEIVGIDISIAQKIADDLGVD---LKIEELGFDALLGALKTGKIDVVISGMAATDE 117 Query: 110 REISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R + F Q ++ + S + G ++ Q TT E Sbjct: 118 RRK--EVNFTDTYMEVQQTVLVRAEDADRFQSTADFDGVAVGAQRQTTQEELANTEL--- 172 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 +RV ++ ++ + DA + A ND + + A Sbjct: 173 -TGSTVTSLQRVPDLITNLKSRKIDAIVMEGPVAEAYVTANDTLALAENVTFENGVKETA 231 Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250 AI + ++ + +++ Sbjct: 232 IAISKEAPVLLEKLNSSIETIIS 254 >gi|160895809|ref|YP_001561391.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160361393|gb|ABX33006.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 256 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 99/274 (36%), Gaps = 21/274 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F I + +T+ A I+K G L+ FA + GF+ Sbjct: 1 MKR--FTVIAAAALALWTAAGVQARPFEAIQKEGTLRLATEGYYAPFAHFEGK-QLTGFE 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ + +++ + + ++ LQ + D++ + T RE + F Sbjct: 58 VELAQMMAAKMGVKYE---WKTISFDALLTGLQQDRWDLVISSHGITPEREK--AVTFTQ 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ++ +M I S L+G ++ VQ GTT + + F E Sbjct: 113 P-HYCSGAIVMSLDPAIRSAKDLAGKTVSVQTGTTYMQYMEKNLP---GIKRLVNFPTNE 168 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + R DA+ + A +L P+ + +++ +A A+ + + + Sbjct: 169 AARNALLSKRVDAWVTERFI--AKELQQKNPNAQLKQGELLLVERIAAAVAKDNKSLAD- 225 Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 A A + + + ++S+ + D++ Sbjct: 226 ------AWNKAFKEALADGSYAKLSQKYFHEDIR 253 >gi|325570568|ref|ZP_08146294.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] gi|325156414|gb|EGC68594.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] Length = 493 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 85/263 (32%), Gaps = 22/263 (8%) Query: 1 MYK----DFFVSILCLIILFFTSFSTNA----SILGDIKKRGFLKCGINTGLVGFAEV-- 50 M + + I+ ++ FF +A I +K+ G L G++ + Sbjct: 1 MKRFSKGTVLLGIITALLPFFFVGQAHAEETDPIYEKVKENGVLVVGLSADYAPYEFRAN 60 Query: 51 -KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 + G D+ + ++ + D ++ L AL++ +ID++ T Sbjct: 61 VDGKNEIVGIDISIAQKIADDLGVD---LKIEELGFDALLGALKTGKIDVVISGMAATDE 117 Query: 110 REISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R + F Q ++ + S + G ++ Q TT E Sbjct: 118 RRK--EVNFTDTYMEVQQTVLVRAEDADRFQSTADFDGVAVGAQRQTTQEELANTEL--- 172 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 +RV ++ ++ + DA + A ND + + A Sbjct: 173 -TGATVTSLQRVPDLITNLKSRKIDAIVMEGPVAEAYVTANDTLALAENVTFENGVKETA 231 Query: 228 PAIIQGDTEWYNIVSWTHYAMVT 250 AI + ++ + +++ Sbjct: 232 IAISKEAPVLLEKLNSSIETIIS 254 >gi|259047073|ref|ZP_05737474.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein/permease protein [Granulicatella adiacens ATCC 49175] gi|259036123|gb|EEW37378.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein/permease protein [Granulicatella adiacens ATCC 49175] Length = 478 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 72/205 (35%), Gaps = 9/205 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + + F NG++ G D++ ++++ A + ++++ L A Sbjct: 32 ETKKYVIATDITFAPFEYQDTNGEYVGIDIELMKSIAEA---EGFEVEFKALGFNAAVQA 88 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 L++ Q+D + T R+ F Y G G + K I+S+S L G + V+ Sbjct: 89 LEAGQVDAVMAGMGITDERK--QKFNFTDSYYDSGIGMGVSKNSDITSLSDLKGKKVAVK 146 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 GT + FE + DA D L +N+ P Sbjct: 147 LGTQGATYAESI--KSKYGFTITTFEDSSSMYQDVMVGNSDALFEDYPVLAYSITSNNLP 204 Query: 212 SEHVILPDIISKSPLAPAIIQGDTE 236 + +K+ A+ +G+ Sbjct: 205 --LKMTDHNENKTEYGVAVNKGENA 227 >gi|148543533|ref|YP_001270903.1| extracellular solute-binding protein [Lactobacillus reuteri DSM 20016] gi|184152939|ref|YP_001841280.1| ABC transporter substrate binding component [Lactobacillus reuteri JCM 1112] gi|227363512|ref|ZP_03847632.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM2-3] gi|325681881|ref|ZP_08161399.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM4-1A] gi|1617328|emb|CAA68052.1| collagen binding protein [Lactobacillus reuteri] gi|148530567|gb|ABQ82566.1| amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus reuteri DSM 20016] gi|183224283|dbj|BAG24800.1| ABC transporter substrate binding component [Lactobacillus reuteri JCM 1112] gi|227071449|gb|EEI09752.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM2-3] gi|324978525|gb|EGC15474.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM4-1A] Length = 263 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 64/215 (29%), Gaps = 18/215 (8%) Query: 1 MY--KDFFVSILCLIILFFTS----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K ++I L + + ++++ ++ +G L G+ ++ N Sbjct: 1 MKFWKKALLTIAALTVGTSAGITSVSAASSAVNSELVHKGELTIGLEGTYSPYSYR-KNN 59 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GF+VD +A++ + ++P L S + D++ N T R Sbjct: 60 KLTGFEVDLGKAVAKKMGLKA---NFVPTKWDSLIAGLGSGKFDVVMNNITQTPERAK-- 114 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F I+ I S+ + G I GT + K + Sbjct: 115 QYNFSTPYIKSRFALIVPTDSNIKSLKDIKGKKIIAGTGTNNANVV------KKYKGNLT 168 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + R A YA N Sbjct: 169 PNGDFASSLDMIKQGRAAGTVNSREAWYAYSKKNS 203 >gi|326622546|gb|EGE28891.1| glutamine ABC transporter, glutamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 220 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 74/210 (35%), Gaps = 12/210 (5%) Query: 38 CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 +T V F + + + GFDVD A++ + D P++ ALQ+K I Sbjct: 1 MATDTAFVPFEFKQGD-KYVGFDVDLWDAIAKELKLDY---TLKPMDFSGIIPALQTKNI 56 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTT 156 D+ T R+ + F Y G ++ I SV L G + V++GT + Sbjct: 57 DLALAGITITDERKK--AIDFSDGYYKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGS 114 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 DY KA+ F ++ +R DA D + T + Sbjct: 115 V----DYTKANIKTKDLRQFPNIDNAYMELGTNRADAVLHDTPNILYFIKTAGNG-QFKA 169 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + A +G E V+ Sbjct: 170 VGESLEAQQYGVAFPKGSDELREKVNGALK 199 >gi|114764748|ref|ZP_01443931.1| ABC amino acid transporter, periplasmic ligand binding protein [Pelagibaca bermudensis HTCC2601] gi|114542797|gb|EAU45819.1| ABC amino acid transporter, periplasmic ligand binding protein [Roseovarius sp. HTCC2601] Length = 276 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 34/227 (14%), Positives = 78/227 (34%), Gaps = 10/227 (4%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I+++G L+ G+ F +G G +V+ + + F + + ++ Sbjct: 31 ASIEEQGVLRIGVKCDSPPFGASGIDGTPIGIEVEMAKKIGEYAFGSEEGAELSCVTSES 90 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R +L S +ID++ RE + F I ++ ++ + +S L+G + Sbjct: 91 RIPSLNSGKIDLILATLGRFPAREEV--IDFSNIYFWGTSNVLVPVDSPVQELSDLAGET 148 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + + G + L + + + A R Y GD +Y L Sbjct: 149 LLIVKGGSQIRWLEENIP----DIEMMQLNTTADGIQALLQGRAAGYVGDGGLIYTL--- 201 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 + ++ + + + + + E V+ + AE Sbjct: 202 AGNYDQLRVVEEGLDLGVNGIGLRKDEPELMAFVNAALD-QLRAENF 247 >gi|227545190|ref|ZP_03975239.1| L-cystine ABC superfamily ATP binding cassette transporter, binding protein YckK [Lactobacillus reuteri CF48-3A] gi|300909133|ref|ZP_07126594.1| polar amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri SD2112] gi|68160752|gb|AAY86822.1| lr0793 [Lactobacillus reuteri] gi|227184836|gb|EEI64907.1| L-cystine ABC superfamily ATP binding cassette transporter, binding protein YckK [Lactobacillus reuteri CF48-3A] gi|300892998|gb|EFK86357.1| polar amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri SD2112] Length = 263 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 63/215 (29%), Gaps = 18/215 (8%) Query: 1 MY--KDFFVSILCLIILFFTS----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K ++I L + + ++++ ++ +G L G+ ++ N Sbjct: 1 MKFWKKALLTIAALTVSTSAGITSVSAASSAVNSELVHKGELTIGLEGTYSPYSYR-KNN 59 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GF+VD +A++ + ++P L S + D++ N T R Sbjct: 60 KLTGFEVDLGKAVAKKMGLKA---NFVPTKWDSLIAGLGSGKFDVVMNNITQTPERAK-- 114 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F I+ I S+ + G I GT + K Sbjct: 115 QYNFSTPYIKSRFALIVPTDSNIKSLKDIKGKKIIAGTGTNNANVV------KKYKGSLT 168 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + R A YA N Sbjct: 169 PNGDFASSLDMIKQGRAAGTVNSREAWYAYSKKNS 203 >gi|326777555|ref|ZP_08236820.1| serine/threonine protein kinase with extracellular ligand sensor(s) [Streptomyces cf. griseus XylebKG-1] gi|326657888|gb|EGE42734.1| serine/threonine protein kinase with extracellular ligand sensor(s) [Streptomyces cf. griseus XylebKG-1] Length = 695 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 34/239 (14%), Positives = 76/239 (31%), Gaps = 7/239 (2%) Query: 20 FSTNASILGDIKKR-GFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSK 77 + + K L+ G+ G ++ ++G+DVD A++ ++ + Sbjct: 425 GAAGSGSQERWKDTHDTLRIGVKDDQPGLSKFDKKTRTYRGYDVDLAYAIAESMGYGKGE 484 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI----SLGLAFRPITYFDGQGFIMHK 133 + + + R AL++KQ+D++ + T R+ + F Y + F++ + Sbjct: 485 VSFTTVATDYRSTALKTKQVDLVIASYSITDDRKTASPGGYSVDFAGPYYDASRSFLVRE 544 Query: 134 KKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K +++ S + V+ T E T ++ + D Sbjct: 545 KSSKYTINDSSDLVDLRVEVCTARESTYETELPKRGFTMAKSQPNTYQDCLDKLLDPKSD 604 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 Y + P + L I A+ T V ++ Sbjct: 605 VYAVASDDIILAGYVKANPGKVRQLEPINGAEGYGVAMRPKSTLLKGEVCSALRTILAG 663 >gi|325978020|ref|YP_004287736.1| inner membrane amino-acid ABC transporter permease yecS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177948|emb|CBZ47992.1| Inner membrane amino-acid ABC transporter permease protein yecS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 517 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 88/280 (31%), Gaps = 29/280 (10%) Query: 2 YKDFFVSILCLIILFFTS-----FSTNASILGDIKKRGFLKCGINTGLVGFAEVK---AN 53 K + + I+ + S S + IK+ G L N G + + Sbjct: 248 KKLTLTTAIIAAIVGIFALNHGGASKTVSSVEKIKESGQLVVATNIGYAPYEFYDLTSGH 307 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G D+ F + L+ + K+ +N + S DI T RE Sbjct: 308 KKAVGVDIAFAQQLADKL---QVKLVVKNMNFDSILGTITSGNADIAIAGMTKTKEREK- 363 Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + F ++ K+ +S+ L+ +I VQ TT + D K Sbjct: 364 -SVDFTENYVKQTNKVVVRKEVASQYTSIESLASTTIAVQKSTTQADVVEDDIK----PQ 418 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + ++ + DA D + +ND + + + A A+ Sbjct: 419 QIVALSSLPDVFLNLLQGKVDAVVADDTVADQYIASNDN-LTYADIELPGTTE-TAMALT 476 Query: 232 QGDTEWYNIVSWTH--------YAMVTAEELGITQKNINQ 263 +G++ V + AE + QKN + Sbjct: 477 KGNSSLKEYVDQLIEQDKKDGTFDKWMAEYSELAQKNTTE 516 >gi|159904734|ref|YP_001548396.1| extracellular solute-binding protein [Methanococcus maripaludis C6] gi|159886227|gb|ABX01164.1| extracellular solute-binding protein family 3 [Methanococcus maripaludis C6] Length = 264 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 100/266 (37%), Gaps = 23/266 (8%) Query: 1 MYKDFFVSIL----CLIILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVK 51 M + I+ +++ S+ A D +++ G LK G+ F Sbjct: 1 MNNKLLMLIIGIIGTVLMFSGCVSSSEAQTAEDNSWKNVEENGVLKVGLCAAWPPFESRN 60 Query: 52 A-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G+ +GFD+D ALS + + ++ + + + F L D L Sbjct: 61 ETTGEIEGFDIDLANALSEELGVE---VEIIDADWQALFGGLSKGDYDTLITCMALKTAY 117 Query: 111 EISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 ++ L Y + ++ K I++VS LSG + VQ T +E + A + Sbjct: 118 AENVEL--SDPYYELNEVIVVRKDNTEINNVSDLSGKIVGVQLATGSEEAV----DALSG 171 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + E + +R DA + YAL ++ P + ++L + +S SP+ Sbjct: 172 IQEIKRYNYNNEAFIDLQNNRVDAVVVGYT--YALVQMSEYP-DLMVLDEPVSSSPVVMV 228 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255 QG E ++ ++ + + Sbjct: 229 QSQGAEELTAKLNEALSDIIESGKYD 254 >gi|294810980|ref|ZP_06769623.1| Glutamine-binding protein [Streptomyces clavuligerus ATCC 27064] gi|294323579|gb|EFG05222.1| Glutamine-binding protein [Streptomyces clavuligerus ATCC 27064] Length = 315 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 80/246 (32%), Gaps = 17/246 (6%) Query: 7 VSILCLIILFFTSFS---TNASILGDI--KKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 ++ +L T+ A+ + +G L + F + +G+ GFDV Sbjct: 51 LAAAVTGVLITTACGTGDQGATTADGVPLVAKGKLTTCTHLPYPPFQF-ERDGEVVGFDV 109 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 ++ + I P + L S + D+ + T R+ + F Sbjct: 110 ALIDRVAKDLGVRQE-ILDTPFENFKTGAFLNSGECDLAAAGMTITEERKK--NVDFSVP 166 Query: 122 TYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q + GI S++++ + Q+GTT E + + + P+ FE Sbjct: 167 YFDATQALLATAGSGIRSLAEVEAEKRKLGAQSGTTGESHVQEQ------GFDPVAFESS 220 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R + DA D + + I + ++ +G+ Sbjct: 221 DAVLNGLRTGQVDAVVIDYPVVQGWLKDPANARAFRLGQSIETGEQYGFSVKKGNDALRA 280 Query: 240 IVSWTH 245 + Sbjct: 281 AIDKVI 286 >gi|282861575|ref|ZP_06270639.1| serine/threonine protein kinase with extracellular ligand sensor(s) [Streptomyces sp. ACTE] gi|282563391|gb|EFB68929.1| serine/threonine protein kinase with extracellular ligand sensor(s) [Streptomyces sp. ACTE] Length = 628 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 76/213 (35%), Gaps = 6/213 (2%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ G+ G + + +KGF+VD +A++ + D ++Q++ +N+ R L++ Sbjct: 381 VLRIGVKRDQPGLSVKSGD-TYKGFEVDLAKAVARELGFDEGQVQFVSVNSGNRSDYLRT 439 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 + D++ + RE +AF Y +G ++ K + + +S L T Sbjct: 440 GRADLVLATYSISDEREREEKVAFAGPYYQALKGLLVRKNRPYNDLSDLQRDPGAEVC-T 498 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD--AYTGDISALYALKLTNDRPS 212 + + K + ++ E+ A R D A D + L + Sbjct: 499 ARDSVYESWIKTEGLAGQQVLRSGFEDCVKALLDPRTDVYAVATDDVIVAGLADKYHEKT 558 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L + A T + V Sbjct: 559 --KALDSLGGAEGYGVATDAERTGLHTEVCAAL 589 >gi|254229166|ref|ZP_04922585.1| bacterial extracellular solute-binding proteins, family 3 [Vibrio sp. Ex25] gi|262395516|ref|YP_003287369.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. Ex25] gi|151938251|gb|EDN57090.1| bacterial extracellular solute-binding proteins, family 3 [Vibrio sp. Ex25] gi|262339110|gb|ACY52904.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp. Ex25] Length = 272 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 85/255 (33%), Gaps = 19/255 (7%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K ++L L I T + + + IK+RG L+ G++T V +A G+ Sbjct: 1 MKLFKATITALLGLAIAMPTIAKEDVATPNVDQIKERGTLRVGMST-FVPWAMRNKQGEL 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GF++D + L+ K++++P AL +K+ D++ T R S + Sbjct: 60 IGFEIDVAKRLAEDSG---LKVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSV 114 Query: 117 AFRPITYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F G +K+ S I + G T + F Sbjct: 115 LFTEPYSHSGVQVAANKELASGFSEFSDFDSRRVKIAARRGAFTVQIARETFPKAK---- 170 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + F+ + A + + + + +SK A A+ Sbjct: 171 ILQFDDDAQAFQEVLNGNAHAVIASSPKPEHETVKHSDKL-FLPFSERLSKGNEAFAVRL 229 Query: 233 GDTEWYNIVSWTHYA 247 G+ + + A Sbjct: 230 GEEDKKAFFNKWIEA 244 >gi|227818922|ref|YP_002822893.1| amino acid ABC transporter periplasmic protein [Sinorhizobium fredii NGR234] gi|227337921|gb|ACP22140.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Sinorhizobium fredii NGR234] Length = 271 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 88/268 (32%), Gaps = 32/268 (11%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 S+L + ++ ++ A + G L+ G F+ A+G+ GFD D Sbjct: 7 LRSVLASGLFLVSAAASQA-------EEGVLRIGTEGDAPLFSMADADGNVTGFDADIAN 59 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 + + + K +++ + ++ S + D++ T R+ + + Sbjct: 60 GICAEL---KLKCKFVVQSFSTLVPSMDSDRFDVIISGLGITAERQK--KIDYSIPYATT 114 Query: 126 GQGFIMHKKKGISSV-------SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 F++ K ++ + L G S+ V GTT + + ++ Sbjct: 115 PLYFVVAKDSPLAGLKSLDEIVKALDGKSLGVVTGTTYAKFIQKHVP----GADLKTYDA 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--------LAPAI 230 + A A R DA GD T + + I + + Sbjct: 171 TTQQTADLAAGRLDAAFGDSPTWADFLAT-PDGAGFTRVDVKIMAMDDPTSLGHGMGVGM 229 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQ 258 +G++E + MVT E+ Sbjct: 230 RKGNSELKAKLDAALCKMVTEGEVKNAS 257 >gi|209543097|ref|YP_002275326.1| family 3 extracellular solute-binding protein [Gluconacetobacter diazotrophicus PAl 5] gi|209530774|gb|ACI50711.1| extracellular solute-binding protein family 3 [Gluconacetobacter diazotrophicus PAl 5] Length = 281 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 89/281 (31%), Gaps = 34/281 (12%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 + ++ A L DI+ G L G+N L A + +GFDVD Sbjct: 19 ILAGCVLSLLPLCIGQGAQARALADIRASGHLNIGVNPALPPLAAYDSRNVIEGFDVDVG 78 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 AL++ + P + +P+++ R L + ++D++ T R +AF Y Sbjct: 79 TALAARLGVSP---RLVPVSSSGRIPYLMAGKVDVVLGGLTRTPERAA--AIAFSAPLYA 133 Query: 125 DGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + I + + L+ + G+T L + ++ + Sbjct: 134 EEFAIIAPAVSRVGGLDDLASGRVRMVEVRGSTAVPFLRTHAPKA----PILLLGSYPDA 189 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA----PAIIQGDTEWY 238 A R DA Y + P + +P A + Q DT+ Sbjct: 190 VRALAQGRGDAMVD--VIEYVGRFLAAEPQAGWTIQ--RGFAPAAGEDCVGVAQSDTDLL 245 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279 +V T + T +R+ G+ Sbjct: 246 RVVDGTL---------------ADLKRDGTIQAAYRRWFGV 271 >gi|297584864|ref|YP_003700644.1| family 3 extracellular solute-binding protein [Bacillus selenitireducens MLS10] gi|297143321|gb|ADI00079.1| extracellular solute-binding protein family 3 [Bacillus selenitireducens MLS10] Length = 249 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 79/252 (31%), Gaps = 22/252 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59 M K + +L + ++ + ++ V F + G+ GF Sbjct: 1 MKK-LAGLTIGSGLLMLAACGDDSDMP-------TYTVATDSSYVPFEFLDTETGEMVGF 52 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D ++ + + I + + + + DI T R F Sbjct: 53 DIDLINEIADRVGFE---IDLEVVEFDGIVSGMGTGRYDIGIAGMTITEERAE--NFDFS 107 Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G + I S+ + G + +A TT+E L + N F Sbjct: 108 DPYYDAGLILAVRADDDEIQSIDDVDGRPVATRAATTSETYLME-----NTDAEVRTFPE 162 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + A R DA D+ + N+ E + D ++ A QG +E Sbjct: 163 IVNAYQDLVAGRVDAVIYDVP-NVLYYIDNEAIGEMRAVGDTLTGEQYGIAFPQG-SELV 220 Query: 239 NIVSWTHYAMVT 250 + V+ M+ Sbjct: 221 DEVNAALAEMME 232 >gi|218889054|ref|YP_002437918.1| putative binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] gi|218769277|emb|CAW25037.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 256 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 34/239 (14%), Positives = 68/239 (28%), Gaps = 19/239 (7%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 L+++ + +A +L D+ +RG L+ + F + G GF+ + L++ Sbjct: 7 LLMLVSLAAPLAHAELLDDVHQRGALRIALEGTYPPFNFKQG-GKLTGFETELGELLAAE 65 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + P ++ LQS + DI R F I Sbjct: 66 LAVKPE---FVTTEWSGILAGLQSGKYDIALNQVSVNEQRRKV--FDFSEPYTISSAQLI 120 Query: 131 MHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + + S+ L G + V GT + + E + Sbjct: 121 VRADETRQFKSLEDLKGLRLGVGQGTNYADLAKSVA-----GVNVRTYPGAPEYLQDLAS 175 Query: 189 HRCDAYTGDISA--LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R DA D + + P P + + ++ ++ Sbjct: 176 KRIDAALNDRLLIPFAIREAKLPVKPGAAVGPVANMAIPY----RKNNPKFGEALNAAL 230 >gi|169835618|ref|ZP_02868806.1| Amino acid-binding protein [candidate division TM7 single-cell isolate TM7a] Length = 269 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 75/216 (34%), Gaps = 14/216 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G N G F N + GFDVD + ++ ++ ++ AL S Sbjct: 44 VIVMGTNAGFKPFEYKNGN-EIVGFDVDIAKEIAKKTNK---TLKIEDMSFDGLLPALNS 99 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 +Q+D++ T RE F Y Q I+ K I + QL G I VQ GT Sbjct: 100 RQVDMVIAGMSVTPEREK--NALFSKSYYSAAQRMIIKKGSSIKNKYQLEGKKIGVQLGT 157 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T + + AH F + A D D + E Sbjct: 158 TGDTLASKIKGAH-----IAQFPTAPSVLTELNAGGVDVAILDNAPAEQYTTGFK---EL 209 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 ++LP +S A AI G+ + + ++ M Sbjct: 210 IVLPGSLSNEDYAIAIKLGNNKLLDQINQVIDEMKQ 245 >gi|315124270|ref|YP_004066274.1| cjaC protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017992|gb|ADT66085.1| cjaC protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 189 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 69/199 (34%), Gaps = 14/199 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++++ L+ LF + S + + + LK G F N GFD Sbjct: 1 MKKILSIALVALVGLFLGACSDSKN--KESNASVELKVGTAPNYKPFNYK-ENSKLTGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR- 119 D ++ + KI ++ N AL++ +ID+++ T R + F Sbjct: 58 TDLVEEIAKK---NGIKIVWVETNFDGLIPALKAGKIDMIASAMSATDER--RQSVDFTK 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 P + + + + L G I VQ GT L + + + Sbjct: 113 PYYMSKNLYLKLKNNDSLQTKNDLEGKKIGVQLGT-----LQENTAKAIKNAQVQSNKDL 167 Query: 180 EEIDAAYRAHRCDAYTGDI 198 A + ++ DA D Sbjct: 168 NIAVLALKNNKIDAIVADQ 186 >gi|186477008|ref|YP_001858478.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184193467|gb|ACC71432.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 266 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 76/218 (34%), Gaps = 11/218 (5%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +I K G LK + F V + +G+D+D L+ ++ K++ +P+N+ Sbjct: 35 DNITKSGVLKVAVPEDYPPFGSVGPDLKPQGYDIDTAALLAKSM---NVKLELVPVNSAN 91 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R LQ+ ++D++ + T RE + F QG +SS + L+G + Sbjct: 92 RIPYLQTNKVDLVISSLGKTAEREKV--IDFSSAYAPYYQGVFGPADLKVSSPADLTGKT 149 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + G E+ L FE AA+ + + A+ Sbjct: 150 VGATRGALEEIALTQMAP----NATIKRFEDNNATIAAFLSGQVQLIAAGNIVAAAILA- 204 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 P +I SP + + + V Sbjct: 205 -KNPPRRPEPKFVIKNSPCFVGLNKNEPRLQQKVDAAI 241 >gi|168183032|ref|ZP_02617696.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum Bf] gi|182673818|gb|EDT85779.1| polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein [Clostridium botulinum Bf] Length = 274 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 74/249 (29%), Gaps = 8/249 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61 K F+S+ ++ L T + K + +K G + F + + +GF++ Sbjct: 7 KKIFLSMSLVVALGVTLTACAQKNKEIKKNKNTIKIGTSGQYYPFTFIDKDSNKVQGFEI 66 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + P + + L + +ID ++ T + F Sbjct: 67 DIWEEIGKRTGYKPE---FKVADWTGIMGMLDTGKIDTVANEITVTD--KKKEKYYFSKP 121 Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERV 179 + G K I S+ L G ++ Q GT ++ DY + + Sbjct: 122 YVYSGVQLATKKGNNNIKSLKDLEGKTVATQVGTNYSKSIEDYNNKNTGEDIKTKQYNSF 181 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D A + + P ++ + E Sbjct: 182 SGMFQDVDLGRVDALIEDKLACLVNIKKSGLNLQLAGEPIEEMENAYPFVKKDENKEKIE 241 Query: 240 IVSWTHYAM 248 ++ M Sbjct: 242 KINKALDDM 250 >gi|319427458|gb|ADV55532.1| ABC arginine transporter, periplasmic ligand-binding subunit, ArtI [Shewanella putrefaciens 200] Length = 244 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 73/225 (32%), Gaps = 18/225 (8%) Query: 31 KKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 K L G N F V + KGFD+D + ++ ++ + Sbjct: 23 KSDDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIDLAKQIAKDAGK---TLKVENMKFDSL 79 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147 +AL S +ID ++ T R+ + F Y Q +++K I ++ + G Sbjct: 80 IVALNSGKIDFIASGMTITAERQA--NVNFSDSYYEATQVVLVNKDNDSIHTLEDIKGKH 137 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 VQ GTT + + + F E + + D D Sbjct: 138 FAVQLGTTAD------IMSKKYTQNITAFNTGFEAIMELKNAKVDLVLFDSEPAANYLAK 191 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 N E ++ A+ + E ++ T A + A+ Sbjct: 192 NP---ELKMIKLDFPAEFYGFAVSKEQPELLASINKTL-ANMKAD 232 >gi|307308008|ref|ZP_07587726.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] gi|306901412|gb|EFN32016.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] Length = 248 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 72/237 (30%), Gaps = 22/237 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K + ++ + S + L LK G +T V G GF Sbjct: 1 MKKLMIALAVAVLASGWASAADLGGKL--------LKVGSDTTSPPMESVDPATGQIVGF 52 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D A+ + I ++ F AL D+++ T R+ + F Sbjct: 53 DIDVVNAICAKINCQAE---FVTTGWDGIFAALDQGNFDLVASGVSITEERKK--AMDFS 107 Query: 120 PITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + Q +M + S+ G + QA TT N + ++ Sbjct: 108 DPYIVNSQAVLMRVEDQGVSLEDFKSKGKKLSAQANTTDAQVAEGVVGKEN----VVAYD 163 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 A + D + + A + E V+ + PL +GD Sbjct: 164 SFSAAIIALKNKDVDGVVINGANAAAYEREFV--GELVVAIRDLESDPLGLVFRKGD 218 >gi|301067834|ref|YP_003789857.1| amino acid ABC transporter permease/periplasmic protein [Lactobacillus casei str. Zhang] gi|300440241|gb|ADK20007.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus casei str. Zhang] Length = 482 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 106/324 (32%), Gaps = 36/324 (11%) Query: 6 FVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKG 58 F++++ +++ F + + L I+KRG+L G++ + G Sbjct: 11 FIALVAMLVGFAANQPVPTAAASEDLAAIQKRGYLVVGLSADYAPLEFHATLNGADTIVG 70 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D+ + ++ + +Q +N AL++ +ID++ T RE + F Sbjct: 71 ADISMSKQIAKDMGVK---LQIKEMNFTALIGALKTGKIDLIVSGMSKTPEREK--EVNF 125 Query: 119 RPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 ++ Q ++ K S++ SG + Q TT E Sbjct: 126 STPYLYETQVMVIRKADKAKYKSIADFSGKKVGAQKQTTQEQLAKTQLP----GAKISSL 181 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ ++ A ++ D + + K+P A A+ + ++ Sbjct: 182 DKANDVIAQVSYNKLDGAVLASTIADSYVARTPSLMVLNP-HFATPKAPTAIAVSKQNSA 240 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP----------DVQRFLGIDKSSNIG 286 V+ T + A+ Q ++ + + + + G Sbjct: 241 LLAQVNKTISKVKGAKYKTYLQAAYKLQDQNQSFWAKYGNYFLRGALYTLIFAVLTVFFG 300 Query: 287 EALG-------LTKDWTYRIIRHM 303 +G L+ W + I ++ Sbjct: 301 TVIGTLLALMKLSHSWFAKAIANV 324 >gi|257467275|ref|ZP_05631586.1| amino acid-binding protein [Fusobacterium gonidiaformans ATCC 25563] Length = 238 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 14/212 (6%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 L G N F + G GFD++ AL+ + D ++ + ALQ Sbjct: 23 KTLYVGTNAEFAPFEYL-EKGKVTGFDMELMNALAKEMKMD---VKIENMAFDGLLPALQ 78 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 K++D++ T R+ ++F + Q I K K I +LSG + V G Sbjct: 79 MKKVDVVIAGMTETPERKK--AVSFTKPYFKAKQVIITKKGKDIKDFKELSGKKVGVMLG 136 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 T + ++D A F+ A + DA D + + Sbjct: 137 FTGDAVVSDIKGAK-----VQRFDTTYSAVMALEKGKVDAVVADSEPAKKYIASYK---D 188 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 I + A A+ + D + ++ Sbjct: 189 LAIASAKAEEEDYAIAVRKNDKALLDNLNKAL 220 >gi|199599469|ref|ZP_03212861.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] gi|199589641|gb|EDY97755.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] Length = 475 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 98/312 (31%), Gaps = 31/312 (9%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++ L L + ST A + G + F + + G D+D +A Sbjct: 1 MAALILTLSLAMPVSTQA-------AKKTYVIGTDVTYAPFEFADKHNQYVGIDIDLMQA 53 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ A + ++ PL AL++ QID + T R+ + Y Sbjct: 54 IAKA---EGFRVDIKPLGFNAAVQALEAHQIDGVIAGMQITPERKQKFAM--SDPYYKTA 108 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 + K G++ + L G + ++ GT + + F+ + Sbjct: 109 VAMAVAKNSGVNQLKDLRGKRVALKTGTAAADF--AMSLKSKYGFSTVTFDDSNNMYQDV 166 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---------W 237 A D L T + + S A +G ++ Sbjct: 167 ITGNSVACFDDKPVLQYAIAT---GLKLKLAGPESKASYYGFATQKGRSDELDQKFNAGL 223 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297 + + YA + A+ LG + + + T + FLG+ + + GL + Sbjct: 224 KKVKADGTYAKIVAKYLGNGTQAAQKQTSAKTQDTDRSFLGLLRENWGTLMNGLRETMVV 283 Query: 298 RIIR-----HMG 304 I+ +G Sbjct: 284 TIVAIFFATAVG 295 >gi|254303822|ref|ZP_04971180.1| amino acid ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324014|gb|EDK89264.1| amino acid ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 242 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 83/256 (32%), Gaps = 23/256 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++ L+ + + K + G N F + GFD Sbjct: 1 MKKFVKLMLISLLSIVISISVFA--------KNNVVYVGTNAEFAPFEYLD-KNKIVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+S + + + ALQ+K++D++ T R+ +AF Sbjct: 52 IDLLDAISKETG---LEFKIQDMAFDGLLPALQTKKVDMVIAGMTATPERQK--AVAFSK 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q I + S L+G + V G T + +++ F Sbjct: 107 PYFKAKQVVITKGVDKSLKSFKDLAGKKVGVMLGFTGDTVVSEI-----KGVKVERFNAA 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A ++ DA D A K T + + VI + A A + D E N Sbjct: 162 YAAILALSQNKIDAVVLDSE--PAKKYTANN-KQFVIANIPAEEEDYAIAFRKNDKELIN 218 Query: 240 IVSWTHYAMVTAEELG 255 V+ + E Sbjct: 219 KVNAALDKIKANGEYD 234 >gi|306831123|ref|ZP_07464284.1| amino acid ABC superfamily ATP binding cassette transporter [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426689|gb|EFM29800.1| amino acid ABC superfamily ATP binding cassette transporter [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 522 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 88/280 (31%), Gaps = 29/280 (10%) Query: 2 YKDFFVSILCLIILFFTS-----FSTNASILGDIKKRGFLKCGINTGLVGFAEVK---AN 53 K + + I+ + S S + IK+ G L N G + + Sbjct: 253 KKLTLTTAIIAAIVGIFALNHGGASKTVSSVEKIKESGQLVVATNIGYAPYEFYDLTSGH 312 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G D+ F + L+ + K+ +N + S DI T RE Sbjct: 313 KKAVGVDIAFAQQLADKL---QVKLVVKNMNFDSILGTITSGNADIAIAGMTKTKEREK- 368 Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + F ++ K+ +S+ L+ +I VQ TT + D K Sbjct: 369 -SVDFTENYVKQTNKVVVRKEVASQYTSIKSLASTTIAVQKSTTQADVVEDDIK----PQ 423 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + ++ + DA D + +ND + + + A A+ Sbjct: 424 QIVALSSLPDVFLNLLQGKVDAVVADDTVADQYIASNDN-LTYADIELPGTTE-TAMALT 481 Query: 232 QGDTEWYNIVSWTH--------YAMVTAEELGITQKNINQ 263 +G++ V + AE + QKN + Sbjct: 482 KGNSSLKEYVDQLIEQDKKDGTFDKWMAEYSELAQKNTTE 521 >gi|288905048|ref|YP_003430270.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus gallolyticus UCN34] gi|288731774|emb|CBI13337.1| putative amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus gallolyticus UCN34] Length = 517 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 88/280 (31%), Gaps = 29/280 (10%) Query: 2 YKDFFVSILCLIILFFTS-----FSTNASILGDIKKRGFLKCGINTGLVGFAEVK---AN 53 K + + I+ + S S + IK+ G L N G + + Sbjct: 248 KKLTLTTAIIAAIVGIFALNHGGASKTVSSVEKIKESGQLVVATNIGYAPYEFYDLTSGH 307 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G D+ F + L+ + K+ +N + S DI T RE Sbjct: 308 KKAVGVDIAFAQQLADKL---QVKLVVKNMNFDSILGTITSGNADIAIAGMTKTKEREK- 363 Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + F ++ K+ +S+ L+ +I VQ TT + D K Sbjct: 364 -SVDFTENYVKQTNKVVVRKEVASQYTSIKSLASTTIAVQKSTTQADVVEDDIK----PQ 418 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + ++ + DA D + +ND + + + A A+ Sbjct: 419 QIVALSSLPDVFLNLLQGKVDAVVADDTVADQYIASNDN-LTYADIELPGTTE-TAMALT 476 Query: 232 QGDTEWYNIVSWTH--------YAMVTAEELGITQKNINQ 263 +G++ V + AE + QKN + Sbjct: 477 KGNSSLKEYVDQLIEQDKKDGTFDKWMAEYSELAQKNTTE 516 >gi|257790012|ref|YP_003180618.1| extracellular solute-binding protein family 3 [Eggerthella lenta DSM 2243] gi|257473909|gb|ACV54229.1| extracellular solute-binding protein family 3 [Eggerthella lenta DSM 2243] Length = 267 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 16/237 (6%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 TS + L G L + F + + +GF VD L+ + Sbjct: 31 TTTSSTSGNDAGYTL---VNDGKLTVAASLDFPPFENLNGD-KPEGFAVDLMTLLAEEMG 86 Query: 73 DDPSKIQYLPLNAKERFLALQSK-QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 + + +Q+ + D+ + T R + F Q + Sbjct: 87 LECEYLP--STKFDTIVPLIQTGGKADVGVSSFTITDKR--LQQVDFTDPYCNVNQSITV 142 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 GI+ V+QL G I Q+GTT A+ K ++ + + AA + + Sbjct: 143 RSDSGITDVAQLEGKKIGAQSGTTGYEWAAENIK----DAEVTGYDEMTAVFAALDSGQI 198 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 DA + D+ + ++ +I + A + + + E ++ A+ Sbjct: 199 DAVSVDLPVANYYVRSYSDCQ---VIKEIPTGEQYAVTVSKENPELTKALNKALQAV 252 >gi|126175589|ref|YP_001051738.1| extracellular solute-binding protein [Shewanella baltica OS155] gi|125998794|gb|ABN62869.1| extracellular solute-binding protein, family 3 [Shewanella baltica OS155] Length = 244 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 70/224 (31%), Gaps = 16/224 (7%) Query: 31 KKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 K L G N F V + KGFD+D + ++ ++ + Sbjct: 23 KSDDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIDLAKQIAKDAGK---TLKVENMKFDSL 79 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 +AL S +ID ++ T R+ ++ + P + I ++ + G Sbjct: 80 IVALNSGKIDFIASGMTITAERQANVNFS-EPYYEATQVVLVNKDNDSIHTLEDIKGKHF 138 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 VQ GTT + + + F E + + D D N Sbjct: 139 AVQLGTTAD------IMSKKYTQNITAFNTGFEAIMELKNSKVDLVLFDSEPAANYLAKN 192 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 E ++ A+ + E ++ T A + A+ Sbjct: 193 P---ELKMIKLDFPAEFYGFAVSKEQPELLASINKTL-ANMKAD 232 >gi|300721601|ref|YP_003710876.1| cysteine ABC transporter periplasmic-binding protein [Xenorhabdus nematophila ATCC 19061] gi|297628093|emb|CBJ88644.1| cysteine transport protein (ABC superfamily, peri_bind) [Xenorhabdus nematophila ATCC 19061] Length = 262 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 66/233 (28%), Gaps = 13/233 (5%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 ++ IK G K G F N GFDVD + ++ + Sbjct: 22 VSAPGYAGKDFDAIKASGVFKIGTEGTYPPFTYHDTNNKLTGFDVDIAQEIAKRLNVKSE 81 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 ++ + L +K+ D + T R F I Sbjct: 82 ---FMEVKWDGLIAGLDAKRFDAVINQVGITPERAA--KYNFSIPYTTSQVVLITRNNND 136 Query: 137 -ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I + + + G Q+ T+ LA + A+ + + + R DA Sbjct: 137 VIKTFADIKGKRSA-QSLTSNYGQLATSYGAN-----LVSTDGFNQAIDLVVTGRADATL 190 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 D + K ++ + A + +GD E ++ M Sbjct: 191 NDRLSFLDFKKQRPDAPVKIVAQQADASKS-AVLVRKGDAELVKAINKALQEM 242 >gi|227549084|ref|ZP_03979133.1| glutamate-binding protein GluB [Corynebacterium lipophiloflavum DSM 44291] gi|227078866|gb|EEI16829.1| glutamate-binding protein GluB [Corynebacterium lipophiloflavum DSM 44291] Length = 290 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 75/230 (32%), Gaps = 15/230 (6%) Query: 27 LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC----RALSSAIFDDPSKIQYLP 82 L I + G + G G +A+G G DVD +++ +I + Sbjct: 36 LAQI-ESGNVTLGTKYDQPGLGLREADGSMTGLDVDVLTYVVNSIAEDKGWAEPEITWRE 94 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVS 141 + +R +Q+ ++ + R ++F QG ++ + I+ + Sbjct: 95 TPSAQRETLIQNGEVAAIGATYSINASRAE--AVSFAGPYLLTHQGLLVRADEKDITGLE 152 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G +C G+T + D ++ A R DA T D S L Sbjct: 153 GLDGRILCSVTGSTPAQKVKDALP----GVQLQEYDTYSSCVEALRNGNVDAMTTDASIL 208 Query: 202 YALKLTNDRPSEHVIL---PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + V L + + + DTE + V+ AM Sbjct: 209 GGYSAQSPGDFAIVELEKDGQPFTNEHYGIGVTKDDTEAVDAVNKALEAM 258 >gi|182436943|ref|YP_001824662.1| putative serine/threonine protein kinase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178465459|dbj|BAG19979.1| putative serine/threonine protein kinase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 699 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 34/239 (14%), Positives = 76/239 (31%), Gaps = 7/239 (2%) Query: 20 FSTNASILGDIKKR-GFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSK 77 + + K L+ G+ G ++ ++G+DVD A++ ++ + Sbjct: 429 GAAGSGSQERWKDTHDTLRIGVKDDQPGLSKFDKKTRTYRGYDVDLAYAIAESMGYGKGE 488 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI----SLGLAFRPITYFDGQGFIMHK 133 + + + R AL++KQ+D++ + T R+ + F Y + F++ + Sbjct: 489 VSFTTVATDYRSTALKTKQVDLVIASYSITDDRKTASPGGYSVDFAGPYYDASRSFLVRE 548 Query: 134 KKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K +++ S + V+ T E T ++ + D Sbjct: 549 KSSKYTINDSSDLVDLRVEVCTARESTYETELPKRGFTMAKSQPNTYQDCLDKLLDPKSD 608 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 Y + P + L I A+ T V ++ Sbjct: 609 VYAVASDDIILAGYVKANPGKVRQLEPINGAEGYGVAMRPKSTLLKGEVCSALRTILAG 667 >gi|326804127|ref|YP_004321945.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] gi|326650473|gb|AEA00656.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] Length = 495 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 88/241 (36%), Gaps = 16/241 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWKGFDVDFCRALSSAIFDDPSK 77 + + +L +IK RG L+ G +G F G DV + ++ + Sbjct: 38 AQDDQLLQEIKDRGVLRFGTASGYAPFEFTVLENGQNRLVGTDVFLAQQIADDLGVK--- 94 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG- 136 ++ + + A+++ +D++ +T R+ + F + D Q F++ K+ Sbjct: 95 LEIVDMEFGSLIPAMETGSVDMIISGMSYTEERDK--KVDFSDVYQSDQQYFVIRKQDQD 152 Query: 137 -ISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I VS G I V T + + + + + + + AA A++ DA Sbjct: 153 KIKDVSYFDQGGKIGVSDNTLQDTLVTERVTSA----EKVAMRKSADAVAALMANQVDAV 208 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D S A + D+ S + AI + ++ T A V + ++ Sbjct: 209 LLDESVAKAFAAEHGELLAIPSGLDVSSDG-KSVAIPNNQPTFLAEINKTVNACVESGQM 267 Query: 255 G 255 Sbjct: 268 D 268 >gi|260575384|ref|ZP_05843383.1| extracellular solute-binding protein family 3 [Rhodobacter sp. SW2] gi|259022304|gb|EEW25601.1| extracellular solute-binding protein family 3 [Rhodobacter sp. SW2] Length = 255 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 67/209 (32%), Gaps = 23/209 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGF 59 M K L+ + +K GI FA A G+W G+ Sbjct: 1 MKKTILTVAALLLGTAAVAAP--------------IKVGIAAEPYPPFASPDAAGNWVGW 46 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +VD A+ A + P+ +L QID + + T R + F Sbjct: 47 EVDMIGAVCKAA---ELECVVTPVAWDGIIPSLTGGQIDAIMASMSITEER--MQTIDFS 101 Query: 120 PITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + K I L G I VQ T E + +F A +++ Sbjct: 102 DKYYNTPTVIVAAKGAAITPDAEGLKGKIIGVQVSTVHEAYVQAHFAA--TAAEIKIYQT 159 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLT 207 +E D A R DA D AL A T Sbjct: 160 QDEADQDLAAGRIDATQADSIALDAFLAT 188 >gi|171320897|ref|ZP_02909894.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171093840|gb|EDT38974.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 265 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 81/251 (32%), Gaps = 19/251 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDV 61 K S+LCL + + + S G L+ G+ F G W GF+ Sbjct: 2 KRVVRSLLCLFSIVVAALAPLGSAHA---SSGVLRFGVAAEPYPPFLMKSPTGQWSGFEA 58 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D RAL + +K + + AL S +ID++ + T R+ + F Sbjct: 59 DLIRALCDQM---KAKCEIKEVAWDGIIPALLSDKIDVIFNSMSITPERQKVIA--FSRP 113 Query: 122 TYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y F+ K ++ L G I VQ T + A+ ++ + Sbjct: 114 YYETPGTFVGAKNTKLTLTPDGLKGKVIGVQGSTANAEFIK---MAYGKSATVRLYNTQD 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP------LAPAIIQGD 234 + +A A R D D + + D + + + P + + + D Sbjct: 171 DCNADLVAGRIDTMYLDQLGILDFLKSKDGSTFELKGSGSVKMDPAIFGYGVGAGMRKAD 230 Query: 235 TEWYNIVSWTH 245 + Sbjct: 231 APLKQQMDQAL 241 >gi|146312500|ref|YP_001177574.1| cationic amino acid ABC transporter, periplasmic binding protein [Enterobacter sp. 638] gi|145319376|gb|ABP61523.1| L-histidine-binding protein [Enterobacter sp. 638] Length = 260 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 87/245 (35%), Gaps = 20/245 (8%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ G + F + G+ GFD+D L I + Y+ +L++ Sbjct: 27 KVRIGTDPTYAPFESKNSKGELVGFDIDLANELCKRI---KVQCTYIENPLDALIPSLKA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAG 153 K+ID++ + T R +AF Y ++ I ++ L G + V G Sbjct: 84 KKIDVIMSSLSITEKR--QQEIAFTDKLYAADSRLVVANASDIQPTLESLKGKRVGVLQG 141 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT E +++ + + ++ E I A A R DA D A L + Sbjct: 142 TTQETYGNEHWAPKGI--EIVSYQGQENIYADLTAGRIDAAFQDEVAASEGFLKTSVGKD 199 Query: 214 HVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268 + I L + + D E ++ +A + A+ +++K Sbjct: 200 YKFGGPSIKDEKLFGVGTGMGLRKEDNELREALNKA-FAEMRAD------GTYEKLAKKY 252 Query: 269 TNPDV 273 + DV Sbjct: 253 FDFDV 257 >gi|315918404|ref|ZP_07914644.1| amino acid-binding protein [Fusobacterium gonidiaformans ATCC 25563] gi|313692279|gb|EFS29114.1| amino acid-binding protein [Fusobacterium gonidiaformans ATCC 25563] Length = 241 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 14/212 (6%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 L G N F + G GFD++ AL+ + D ++ + ALQ Sbjct: 26 KTLYVGTNAEFAPFEYL-EKGKVTGFDMELMNALAKEMKMD---VKIENMAFDGLLPALQ 81 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 K++D++ T R+ ++F + Q I K K I +LSG + V G Sbjct: 82 MKKVDVVIAGMTETPERKK--AVSFTKPYFKAKQVIITKKGKDIKDFKELSGKKVGVMLG 139 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 T + ++D A F+ A + DA D + + Sbjct: 140 FTGDAVVSDIKGAK-----VQRFDTTYSAVMALEKGKVDAVVADSEPAKKYIASYK---D 191 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 I + A A+ + D + ++ Sbjct: 192 LAIASAKAEEEDYAIAVRKNDKALLDNLNKAL 223 >gi|301301313|ref|ZP_07207463.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851087|gb|EFK78821.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 485 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 74/236 (31%), Gaps = 13/236 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++F + F S+ D K + F + + G D Sbjct: 1 MKKFITFLSIISSLIFLSFFVKPQSVHADEK---TYTIATDVTFPPFEYANDSNKYVGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + K+ P+ ++ + Q+D + T R+ F Sbjct: 58 IDLMNAIAKE---EGFKVDLKPIGFNAALQSVSAGQVDGMIAGMTITDERK--QKFDFSK 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + I S+ QL G + ++ GT+ + K + F+ + Sbjct: 113 PYYSSGIVMAVKPDSSIKSLKQLRGKKVAIKTGTSGADYANSIKDKYGFKT--VTFDDSD 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + A D L+ I+ + A+ +G + Sbjct: 171 NMYNDVKNGNSVACFED---SAVLEYGISTGLGLKIVTKPANSGNFGFAVKKGTHQ 223 >gi|242238190|ref|YP_002986371.1| prephenate dehydratase [Dickeya dadantii Ech703] gi|242130247|gb|ACS84549.1| Prephenate dehydratase [Dickeya dadantii Ech703] Length = 255 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 84/257 (32%), Gaps = 15/257 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L L AS L ++++G LK + +A+GD++G D Sbjct: 1 MRKRFLFILL----LGGAGSVNAASHLDQVQEQGVLKVCTTGDYKPYTSQRADGDYEGID 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + R+L+ ++ + ++++ + K QS + DI TL R+ + Sbjct: 57 ISMARSLAKSLGVN---VEWVKTSWKTLMPDFQSGKCDIAMGGISVTLERQKKAFFSSML 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIVFER 178 K +V+QL+ S+ V T E + Y + ++ Sbjct: 114 DVDGKIPLVRCEDKDKYRTVAQLNQPSVRVIEPAGGTNEAFVHAYLPNAH-----LMLHD 168 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I + D D S + + + A + + D W Sbjct: 169 NVTIFQQLVDKQADVMITDASEALFQQKRYPQLCAVNPSSPLQYGE-KAYMLPRDDMNWK 227 Query: 239 NIVSWTHYAMVTAEELG 255 V + + E Sbjct: 228 LYVDQWLHLSKSNGEYR 244 >gi|170289920|ref|YP_001736736.1| extracellular solute-binding protein [Candidatus Korarchaeum cryptofilum OPF8] gi|170174000|gb|ACB07053.1| extracellular solute-binding protein family 3 [Candidatus Korarchaeum cryptofilum OPF8] Length = 289 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 71/222 (31%), Gaps = 8/222 (3%) Query: 33 RGFLKC--GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 G + G + F ++ NG GFDVD ++ I Y P + Sbjct: 60 SGEVTIIYGFDANYPPFTVMQPNGTPVGFDVDLMNLIAEKYGWK---IVYKPWDWSTIVT 116 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 AL++ ID+++ + R S + F Y ++ + S L+ Sbjct: 117 ALENGDIDVIASGMTFNAAR--SQKIWFSVPYYSYVHQLVVRSEDKRSFDEILNSNEYIA 174 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 +T AD K+ + + A R A D + L + Sbjct: 175 VQLGSTSDEWADRLIKAGYKFKKLGLDSYVSALEALLDGRASAVITDSAFLGPYLKKDPD 234 Query: 211 PSEH-VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 + +L I + + A A D + ++ ++ + Sbjct: 235 LAAKVKVLGSIGAPNVYAIATRPQDKWLRDKINEALEELMNS 276 >gi|118590987|ref|ZP_01548387.1| putative periplasmic binding abc transporter protein [Stappia aggregata IAM 12614] gi|118436509|gb|EAV43150.1| putative periplasmic binding abc transporter protein [Stappia aggregata IAM 12614] Length = 259 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 76/219 (34%), Gaps = 9/219 (4%) Query: 35 FLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 +K GI F ++G W G++++F A+ + D P+ AL Sbjct: 26 EVKVGIAAEPYPPFTSPDSSGKWVGWEIEFMDAICAEAKLD---CVVTPVAWDGIIPALT 82 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152 S +ID++ + T R + + F Y G I K + LSG I VQ Sbjct: 83 SGKIDMIIGSMSITEERLKT--IDFSDKYYNTPTGIIGAKGDDFEATPEGLSGKIIGVQV 140 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 T +F ++ ++ +E + A R DA D AL A + Sbjct: 141 STIHADYAEKHFG--DVAAEIKQYQTQDEANQDLAAGRVDAVQADAIALDAFLKSEGGDC 198 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 + ++ L + G + + A + A Sbjct: 199 CELKGNVEDDQAILGAGVGVGLRKDDTELKDKLNAAIKA 237 >gi|317054119|ref|YP_004118144.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316952114|gb|ADU71588.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 254 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 71/230 (30%), Gaps = 17/230 (7%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G + + F + ANG G+DVD A+ +A D + I L Sbjct: 24 GTITIATDATFPPFESIDANGKLVGYDVDLMHAICTAAALDCNVIS---APWDGMIPGLM 80 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQA 152 + + D L T R + F I F+ K +S L G I VQ Sbjct: 81 NNKYDALISQLTVTDARRRVMA--FSDIYDHPVFRFVAKKGTLTDTSPEALKGKVIAVQT 138 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT + + ++ ++ A R D + + + L D Sbjct: 139 GTPMDTFVTKHYP----GSTIKRYDGGSAPYLDLTAGRADIFMSYEAQIIYSFLKKDDGK 194 Query: 213 EHVILPD-------IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 ++ ++ + A+ + +T ++ + EL Sbjct: 195 DYQLVGPRLTGKDAPEFGEGVGIAMNKKNTALVEKINQGLAKVRADGELD 244 >gi|255654800|ref|ZP_05400209.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile QCD-23m63] gi|296449543|ref|ZP_06891320.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding cassette transporter [Clostridium difficile NAP08] gi|296878134|ref|ZP_06902149.1| amino acid ABC superfamily ATP binding cassette transporter, substrate-binding protein [Clostridium difficile NAP07] gi|296261607|gb|EFH08425.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding cassette transporter [Clostridium difficile NAP08] gi|296430887|gb|EFH16719.1| amino acid ABC superfamily ATP binding cassette transporter, substrate-binding protein [Clostridium difficile NAP07] Length = 271 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 68/225 (30%), Gaps = 14/225 (6%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFD 73 S + L IK G L G + F V KGFD+ + + Sbjct: 22 GCSGGGEKTKLEQIKDSGKLVVGTSAEFPPFEFHKVVDGKDSIKGFDIMLAEEFAKELGV 81 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH- 132 ++ ++ AL + Q+DI+ T RE + F + Y I+ Sbjct: 82 K---VEIKDMSFDGLIGALNADQVDIVLAGMSPTPEREK--SVDFSELYYLSRNAVIVKD 136 Query: 133 -KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 + + L + VQAG+ E + + K + + ++ + Sbjct: 137 ADIDKVKTEDDLKKLRVGVQAGSIQEEYVVNTLK----MTTTKSLKAIPDLITELKNGNI 192 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 DA + + D +A AI + D Sbjct: 193 DAVVTNEAVSLINVKKYDGIKMANTEVGKNVTEGMAAAIKKADNN 237 >gi|254362204|ref|ZP_04978319.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica PHL213] gi|153093776|gb|EDN74715.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica PHL213] Length = 257 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 71/211 (33%), Gaps = 13/211 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K SI L + S S+L I +G + G + A+G G+D Sbjct: 1 MLKKL--SIAALALTLSVSAFAKESLLERINNKGTITVGTEGTYAPYTYHDASGKLTGYD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ RA++ + K+++ L+ ++ D+++ T E Sbjct: 59 VEVTRAVAEKL---DVKVEFKETQWDAMLAGLKGERFDLVANQVALT-SPERRATFDKSE 114 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +DG ++ + I + + + G V+ T + + + + + + Sbjct: 115 SYSWDGAALLVREDETKIKTPADVKG----VKTAQTLSSNYGEIARENGAD--IVPIDGM 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + R DA +L N Sbjct: 169 AQGLLLIQQKRADATFNSHLSLLDYLKKNPN 199 >gi|119961444|ref|YP_946819.1| amino acid ABC transporter [Arthrobacter aurescens TC1] gi|119948303|gb|ABM07214.1| putative amino acid ABC transporter [Arthrobacter aurescens TC1] Length = 271 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 39/232 (16%), Positives = 67/232 (28%), Gaps = 14/232 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-VKANGDWKGFDVDFCRALSSAIFDD 74 + S + L D+K +G L F+ G+ GFDV+ +A++ + Sbjct: 29 SAPAQSGGDTSLSDVKSKGELVIATEGTYRPFSFHADGAGELTGFDVEVAQAVAGKLGVK 88 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK- 133 + F L+SK+ D ++ R+ F + Sbjct: 89 A---TFQETQFDGIFAGLESKRFDTIANQISINDERKA--KYDFSTPYTISTGVVVTKSD 143 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I+S + L G + Q+ T+ +A A+ E + + R DA Sbjct: 144 NSSINSFADLKGKTTA-QSLTSNFYKMAVEAGAN-----VQAVEGWAQSATLVQQGRVDA 197 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 D V A +G TE V Sbjct: 198 TVNDKLTYLDYAKNTPDSGLKVAAEAPEKTES-AMVFRKGSTELTAAVDKAL 248 >gi|295680982|ref|YP_003609556.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295440877|gb|ADG20045.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 257 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 77/225 (34%), Gaps = 13/225 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K ++ G++ F +G GFDVD + + +K ++ + Sbjct: 20 KDWSTVRFGVDASYAPFESKATDGKLVGFDVDLGTEICRRL---NAKCVWVEQDFDSMIP 76 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASIC 149 AL++K+ D + + T R + F + + K GI + L G ++ Sbjct: 77 ALKAKKFDGVLSSMSMTPKRAEQIA--FSSKLFNTPTRLVAKKGSGIMPTADSLKGKTVG 134 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ GT E Y++A + ++ + + ++ R DA D L Sbjct: 135 VEQGTIQETYAKTYWEAKG--VKIVPYQNQDAVYTDLQSGRLDAALQDAVQADQGFLKTP 192 Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMV 249 R + + I + + + D + V M+ Sbjct: 193 RGASFDFVGKNIDDPQILGNGAGIGMRKEDEDLKIKVDKAIADMI 237 >gi|257895699|ref|ZP_05675352.1| amino acid ABC transporter [Enterococcus faecium Com12] gi|257832264|gb|EEV58685.1| amino acid ABC transporter [Enterococcus faecium Com12] Length = 535 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 90/273 (32%), Gaps = 28/273 (10%) Query: 1 MYKD-----FFVSILCLIILFF----------TSFSTNASILGDIK-KRGFLKCGINTGL 44 M + F + L+ L F T+ S+ + + I+ K+ ++ Sbjct: 36 MKRKHLFHSFVFLMTGLVTLAFGHVAQADNTTTAESSTSETMQKIEPKKDVYVIASDSAF 95 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F ANG+++G DV +++ I+ AL+S Q D + Sbjct: 96 APFEFQNANGEYEGIDVQLMESIAK---LQGFNIRMDYRGFSAALQALESGQADGMIAGM 152 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADY 163 T R+ F + G + K I S L G ++ + GT + L+D+ Sbjct: 153 TVTDERKK--SYDFSDSYFDSGIQLAVKKGDTSIKSYEDLKGKTVGAKVGTESAEFLSDH 210 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + F+ +++ + DA D + + E + S Sbjct: 211 ESEYGYS--IKYFDAADQLYDGLKVGAIDAMMDDYPVIG---YAIKQGQELETPIEKESG 265 Query: 224 SPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255 A A+ + + E N+ + + E Sbjct: 266 GKYAFAVKKGQNPELLNMFNEGLKELKRTGEYD 298 >gi|269120481|ref|YP_003308658.1| extracellular solute-binding protein family 3 [Sebaldella termitidis ATCC 33386] gi|268614359|gb|ACZ08727.1| extracellular solute-binding protein family 3 [Sebaldella termitidis ATCC 33386] Length = 272 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 80/249 (32%), Gaps = 22/249 (8%) Query: 1 MYKDFF--VSILCLIILFFTSFS----------TNASILGDIKKRGFLKCGINTGLVGFA 48 M V+IL L +L + S D K+ G + F Sbjct: 1 MKGKILKLVTILSLFMLMLSCGSDKKEEAKQEGAATEAKADNKEVKKYVIGSDVAFAPFE 60 Query: 49 EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108 +G ++G D+D ++ + ++++ ++ A+QS Q+D Sbjct: 61 FK-KDGKYEGIDIDIVNEIAK---IEGFEVEWKHMDFSGIIGAVQSGQLDGAIAGMTIND 116 Query: 109 LREISLGLAFRPITYFD-GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R + + F Y G + I+S + V+ GTT + + Sbjct: 117 ERRKT--VDFSDPYYDTGIVGIVKADNTDINSPDDFKDKRLAVKKGTTGAEYAESVKEKY 174 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 N K FE + + + D D + P + I + ++ + Sbjct: 175 NTKITV--FEDTSTMIQSVINGQADVAFDDFPVIAYAITQ-QDPVQLRIATERLNTAQFG 231 Query: 228 PAIIQGDTE 236 A+ +G + Sbjct: 232 FAVKKGANQ 240 >gi|291298121|ref|YP_003509399.1| extracellular solute-binding protein family 3 [Stackebrandtia nassauensis DSM 44728] gi|290567341|gb|ADD40306.1| extracellular solute-binding protein family 3 [Stackebrandtia nassauensis DSM 44728] Length = 272 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 78/247 (31%), Gaps = 19/247 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGINTGLVGFAEVKANG 54 + V ++ + + + A + I L N V F + NG Sbjct: 8 RLLAVGLVVAVGMTVAACGGGAEKTKTPGGYTVELI-DAKKLTVCTNIPYVPFQF-EKNG 65 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFDVD L++ + + + E AL + D+ + T RE Sbjct: 66 KTVGFDVDMVD-LAADELGVKQDVIDVKWDNIENGSALSGGKCDLAAAAMTITPEREK-- 122 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 L F + + F+ K K SV + + VQA TT+ A K P Sbjct: 123 NLTFSEPYFDEVIAFVAPKGKAPKSVEDVGDRKLGVQASTTSLEY------AKKHKLEPQ 176 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 FE + A + + + D + +++ + I + S + Sbjct: 177 EFEDSAKQRAGLESGKVEVVLQDYPVITEWMKDEKFAAKYEVGQIIETGSQYGFGFKKSA 236 Query: 235 TEWYNIV 241 + V Sbjct: 237 DKTLVKV 243 >gi|254236426|ref|ZP_04929749.1| cyclohexadienyl dehydratase precursor [Pseudomonas aeruginosa C3719] gi|126168357|gb|EAZ53868.1| cyclohexadienyl dehydratase precursor [Pseudomonas aeruginosa C3719] Length = 322 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 77/261 (29%), Gaps = 18/261 (6%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 CL +L S S L I + G L+ F+ G + GFDVD + L+ Sbjct: 67 ACLALLASASLQAQESRLDRILESGVLRVATTGDYKPFSYRTEEGGYAGFDVDMAQRLAE 126 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 ++ + + + DI L R+ F DG+ Sbjct: 127 SLGAKLVVVP---TSWPNLMRDFADDRFDIAMSGISINLERQR--QAYFSIPYLRDGKTP 181 Query: 130 IM----HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 I + G + V G T E + +A+ K +V I Sbjct: 182 ITLCSEEARFQTLEQIDQPGVTAIVNPGGTNE----KFARANLKKARILVHPDNVTIFQQ 237 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + D D L+ V + A + + + + V Sbjct: 238 IVDGKADLMMTDA-IEARLQSRLHPELCAVHPQQPFDFAEKAYLLPRDE-AFKRYVDQWL 295 Query: 246 YAMVTAEELGITQKNINQVSK 266 + AE+ G+ ++ + + Sbjct: 296 H---IAEQSGLLRQRMEHWLE 313 >gi|258540995|ref|YP_003175494.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc 705] gi|257152671|emb|CAR91643.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus Lc 705] Length = 482 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 108/331 (32%), Gaps = 39/331 (11%) Query: 2 YKDFFVSILCLIILFFT-------SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51 K + V+I+ LI + + + L I+KRG+L G++ + Sbjct: 4 IKHWAVAIIALIAMIVGFTSYQPVPTAAASKDLAAIQKRGYLVVGLSADYAPLEFHATIN 63 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+ + ++ + +Q +N AL++ +ID++ T RE Sbjct: 64 GADTIVGADISMSKQIAKDMGVK---LQIKEMNFTALIGALKTGKIDLIVSGMSKTPERE 120 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + F ++ Q ++ K S++ SG + Q TT E Sbjct: 121 K--EVNFSTPYLYETQVMVIRKADKAKYKSIADFSGKRVGAQKQTTQEQLAKTQLP---- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 ++ ++ A ++ DA + + + K+P A A Sbjct: 175 GAKVTSLDKANDVVAQISYNKLDAGVLASTIADSYVARTPSLTVIDP-HFATDKAPTAIA 233 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP----------DVQRFLGI 279 + + V+ T + A+ Q +D + + Sbjct: 234 VSKQSPALLKQVNKTISKVKGAKYKSYLQAAYKLQDQDQGFWAKYGNYFIRGAIYTLVFA 293 Query: 280 DKSSNIGEALG-------LTKDWTYRIIRHM 303 + G +G L+++W +++ ++ Sbjct: 294 VLTVLFGTIIGTLLALMKLSRNWLAKVVANI 324 >gi|116496232|ref|YP_807966.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus casei ATCC 334] gi|116106382|gb|ABJ71524.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus casei ATCC 334] Length = 482 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 106/324 (32%), Gaps = 36/324 (11%) Query: 6 FVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKG 58 F++++ +++ F + + L I+KRG+L G++ + G Sbjct: 11 FIALVAILVGFAANQPVPTAAASEDLAAIQKRGYLVVGLSADYAPLEFHATLNGADTIVG 70 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D+ + ++ + +Q +N AL++ +ID++ T RE + F Sbjct: 71 ADISMSKQIAKDMGVK---LQIKEMNFTALIGALKTGKIDLIVSGMSKTPEREK--EVNF 125 Query: 119 RPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 ++ Q ++ K S++ SG + Q TT E Sbjct: 126 STPYLYETQVMVIRKADKAKYKSIADFSGKKVGAQKQTTQEQLAKTQLP----GAKISSL 181 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ ++ A ++ D + + K+P A A+ + ++ Sbjct: 182 DKANDVIAQVSYNKLDGAVLASTIADSYVARTPSLMVLNP-HFATPKAPTAIAVSKQNSA 240 Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP----------DVQRFLGIDKSSNIG 286 V+ T + A+ Q ++ + + + + G Sbjct: 241 LLAQVNKTISKVKGAKYKTYLQAAYKLQDQNQSFWAKYGNYFLRGALYTLIFAVLTVFFG 300 Query: 287 EALG-------LTKDWTYRIIRHM 303 +G L+ W + I ++ Sbjct: 301 TVIGTLLALMKLSHSWFAKAIANV 324 >gi|83717417|ref|YP_440319.1| amino acid ABC transporter periplasmic amino acid-binding protein [Burkholderia thailandensis E264] gi|167578947|ref|ZP_02371821.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis TXDOH] gi|167617047|ref|ZP_02385678.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis Bt4] gi|83651242|gb|ABC35306.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis E264] Length = 262 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 74/223 (33%), Gaps = 13/223 (5%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 K ++ G++ F +G GFDVD + + +K ++ + Sbjct: 23 QAKDWSTIRFGVDASYPPFESKGPDGKVVGFDVDLGNEICKRV---KAKCVWIENDFDGM 79 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGAS 147 AL++++ D + + T RE + F + + K + + L G + Sbjct: 80 IPALKARKFDGVLSSMSMTPQREEQIA--FSSKLFNTPTRLVTKKGANLMPTAESLKGKT 137 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + V+ GT E ++ + ++ +++ A A R DA D L Sbjct: 138 VGVEQGTIQETYAKVHWAPKG--VNIQPYQNQDQVYADLIAGRLDAALQDAVQADIGFLK 195 Query: 208 NDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 R + ++ + + DT+ + Sbjct: 196 TPRGKDFAFAGSDLNDPKTLGEGAGIGLRKEDTDLKAKIDKAI 238 >gi|330469204|ref|YP_004406947.1| extracellular solute-binding protein family 3 [Verrucosispora maris AB-18-032] gi|328812175|gb|AEB46347.1| extracellular solute-binding protein family 3 [Verrucosispora maris AB-18-032] Length = 303 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 72/234 (30%), Gaps = 14/234 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYL 81 A + IK G +K G + + +G GFDV+ A++ + Y Sbjct: 51 AAKVPDAIKADGVIKVGTDATYAPAEFLDTDGSTVIGFDVELFNAVAQKLGLKAE---YE 107 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 +QS + +I + R S+ + + G + Sbjct: 108 SAPFDAILPGVQSGKYEIGVSSFTINADRLQSVNM---VSYFSAGTQWATKAGNPAQVDP 164 Query: 142 QL-SGASICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 G I VQ GT + A + ++ + AA + + DA Sbjct: 165 DNACGKKIAVQVGTVQLDDITARSKACTDAGKPEITIDQYQAQSDATAAVVSGKNDAMLA 224 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 D + +L DI +P A+ + T + ++ A++ Sbjct: 225 DSP--VGAYAVKQSNGQLEVLGDIYESAPYGYAVPKDQTAFAEVLKEAVQAVIA 276 >gi|238749890|ref|ZP_04611394.1| Glutamine-binding periplasmic protein [Yersinia rohdei ATCC 43380] gi|238711819|gb|EEQ04033.1| Glutamine-binding periplasmic protein [Yersinia rohdei ATCC 43380] Length = 247 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 77/220 (35%), Gaps = 13/220 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 L +T V F + + + GFD+D A++ + K P++ A Sbjct: 23 AEKELIVATDTAFVPFEFKQGD-KYVGFDIDLWDAIAKKL---DLKYTLKPMDFSGIIPA 78 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICV 150 LQ+K +D+ T R+ + F Y G ++ I + L+G + V Sbjct: 79 LQTKNVDLALAGITITDERKK--AVDFSDGYYNSGLLVMVKADNNDIKGEADLAGKVLAV 136 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++GT + DY KA+ F ++ R DA D + T Sbjct: 137 KSGTGSV----DYAKANIKTKDLRQFPNIDNAYLELGTGRADAVLHDTPNILYFIKTAGN 192 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + + D I A QG ++ V+ ++ Sbjct: 193 G-QFKAVGDSIKAQQYGVAFPQG-SDLREKVNAALKSLKE 230 >gi|50121592|ref|YP_050759.1| arginine-binding periplasmic protein 1 [Pectobacterium atrosepticum SCRI1043] gi|49612118|emb|CAG75568.1| arginine-binding periplasmic protein 1 [Pectobacterium atrosepticum SCRI1043] Length = 243 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 82/249 (32%), Gaps = 29/249 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K I+ + + + A ++ F V AN +GFD Sbjct: 1 MKK----LIVAALFAVGAASANAADT---------IRFATEASYPPFEFVDANNQIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + + L+ ++ + + D T R ++F Sbjct: 48 IDLANALCKEM---QANCTFSNQAFDSLIPGLKFRRFEAVIAGMDITPER--QQQVSFSQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + FI K ++ V+ L G + +Q G+T + L + + ++ + Sbjct: 103 PYYDNAALFIAQKG-KVADVAALKGKRVGMQNGSTHQKYLLEKHPE----ITAVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP----LAPAIIQGDTE 236 ++ R DA GD + + + + ++ K L A+ Q + E Sbjct: 158 NAVLDLKSGRLDAVFGDTAVVNEWLKQ--NDTLATVGENVTDKDYFGIGLGIAVRQNNDE 215 Query: 237 WYNIVSWTH 245 + Sbjct: 216 LLKKFNDAL 224 >gi|320535310|ref|ZP_08035430.1| bacterial extracellular solute-binding protein, family 3 [Treponema phagedenis F0421] gi|320147842|gb|EFW39338.1| bacterial extracellular solute-binding protein, family 3 [Treponema phagedenis F0421] Length = 273 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 80/268 (29%), Gaps = 16/268 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS--------ILGDIKKRGFLKCGINTGLVGFAEVKA 52 M + I+ +LF S L + G L G++ Sbjct: 1 MKSKILLCIIAFQLLFLFFSCEKESEELVSDDISLSKVLASGKLIMGVDDDSPPMCFKYG 60 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G+DVD RA+ + ++ P+ + L ++D + T RE Sbjct: 61 ESQIVGYDVDLARAVCRILG---ITLEIRPIPWSLKNTLLDIGEVDCIWSALSVTPERE- 116 Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F Q I+ K +++L + QA ++ E LA Sbjct: 117 -DEFCFSGAYARTAQVIIVSNKSTYRKLNELKKKRMAFQASSSAESALAANPDFLLSLKD 175 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 I E ++ A D+ D+ + P IL ++ A + Sbjct: 176 VIPMETTTDVFEAVINGSVDSGLVDLVTAHDAIRRLGMP--LKILDMPLNSEVYAVGFKK 233 Query: 233 GDTEWYNIVSWTHYAMVT-AEELGITQK 259 G+ V + E I+QK Sbjct: 234 GNIALMEAVQGALEKLEERGEAYNISQK 261 >gi|199597667|ref|ZP_03211095.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus rhamnosus HN001] gi|229551247|ref|ZP_04439972.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|258509811|ref|YP_003172562.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG] gi|199591474|gb|EDY99552.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus rhamnosus HN001] gi|229315410|gb|EEN81383.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|257149738|emb|CAR88711.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus GG] gi|259651074|dbj|BAI43236.1| amino acid ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 482 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 108/331 (32%), Gaps = 39/331 (11%) Query: 2 YKDFFVSILCLIILFFT-------SFSTNASILGDIKKRGFLKCGINTGLVGFAE---VK 51 K + V+I+ LI + + + L I+KRG+L G++ + Sbjct: 4 IKHWAVAIIALIAMIVGFTSYQPVPTAAASKDLAAIQKRGYLVVGLSADYAPLEFHATIN 63 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G D+ + ++ + +Q +N AL++ +ID++ T RE Sbjct: 64 GADTIVGADISMSKQIAKDMGVK---LQIKEMNFTALIGALKTGKIDLIVSGMSKTPERE 120 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + F ++ Q ++ K S++ SG + Q TT E Sbjct: 121 K--EVNFSTPYLYETQVMVIRKADKAKYKSIADFSGKRVGAQKQTTQEQLAKTQLP---- 174 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 ++ ++ A ++ DA + + + K+P A A Sbjct: 175 GAKVTSLDKANDVVAQISYNKLDAGVLASTIADSYVARTPSLTVIDP-HFATDKAPTAIA 233 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP----------DVQRFLGI 279 + + V+ T + A+ Q +D + + Sbjct: 234 VSKQSPALLKQVNKTISKVKGAKYKSYLQAAYKLQDQDQGFWAKYGNYFIRGAIYTLVFA 293 Query: 280 DKSSNIGEALG-------LTKDWTYRIIRHM 303 + G +G L+++W +++ ++ Sbjct: 294 VLTVLFGTIIGTLLALMKLSRNWLAKVVANI 324 >gi|167586326|ref|ZP_02378714.1| extracellular solute-binding protein, family 3 [Burkholderia ubonensis Bu] Length = 261 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 76/224 (33%), Gaps = 13/224 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 + L+ GI F G +GFDVD A+ + + K ++ Sbjct: 24 QSANTLRFGIEAAYPPFESKTPAGQLQGFDVDVGNAVCAKL---KMKCVWVENAFDGLIP 80 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149 ALQ+++ D ++ + T R + F P Y + + + + L G + Sbjct: 81 ALQARKFDAINSAMNITAKR--RQSIDFTPAIYVVPIVMVAKRGSPLLPDAASLRGKRVG 138 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V G++ E L ++ + + ++I A A R DA + L Sbjct: 139 VLQGSSQEDFLKAHWA--GAGVSVVSYPDQDQIYADLVAGRLDAAVQEAQTAQDGFLDKP 196 Query: 210 RPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248 ++ I+ + + + +GD + A+ Sbjct: 197 AGRDYQIVGEPLKDPATLGEGTGFGMRKGDKALQAKLVGALDAL 240 >gi|158319238|ref|YP_001511745.1| extracellular solute-binding protein [Alkaliphilus oremlandii OhILAs] gi|158139437|gb|ABW17749.1| extracellular solute-binding protein family 3 [Alkaliphilus oremlandii OhILAs] Length = 281 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 91/269 (33%), Gaps = 34/269 (12%) Query: 1 MYK---DFFVSILCLIILFFTSFSTNA----------------SILGDIKKRGFLKCGIN 41 M K F S++ IL T+ S + IKK G L G + Sbjct: 1 MKKFSKLFIASLIIGGILSLTACGNGGGATTGGETETGGKEVVSKIEQIKKSGKLILGTS 60 Query: 42 TGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQID 98 + + GFD++ + ++ + + ++ ++ LAL + ++D Sbjct: 61 ADYPPYEFHKEIDGKDTIVGFDIEIAKEIAKDLGVE---LEIKDMDFDGLLLALNADKVD 117 Query: 99 ILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTT 156 ++ T E + F I Y G +++ K +V L+G + Q G Sbjct: 118 MVMAGM--TPDPERIKVVDFSKIYYEAVHGVVINVANKDTFKTVEDLAGKKVGAQKGAVQ 175 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 E + ++ ++ + ++ DA + + N + Sbjct: 176 EDIAVNEIP----DIELKSLAKIPDLVLEVKHNKIDALVMEKPVANSYVDHNSD-LALMD 230 Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L + A AI +G+T+ ++ T Sbjct: 231 LTFDDGEGGSAVAIKKGNTDLMEEINKTL 259 >gi|78063316|ref|YP_373224.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77971201|gb|ABB12580.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 256 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 31/227 (13%), Positives = 73/227 (32%), Gaps = 15/227 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K L+ G++ F + +G GFD+D A+ + + ++ Sbjct: 20 KDPAVLRLGVDPSYAPFESLAPDGKLVGFDIDLGNAICERM---KVRCVWVENAFDGMIP 76 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149 AL++++ D + + T R + F + + + + L G S+ Sbjct: 77 ALKARKFDGVLSSMSVTEKRLAQIA--FTDKINNVPPRLVARRGSNLQPTPESLQGKSVG 134 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ G+T E Y++ ++ + + + R DA L Sbjct: 135 VEQGSTQETYARTYWEPKG--VIVRTYQTQDLVYQDLLSGRLDASLQSSVQADLGFLKTA 192 Query: 210 RPSEHVILPDIISKSPL------APAIIQGDTEWYNIVSWTHYAMVT 250 + + + P A + + D ++ +++ Sbjct: 193 KGANFEFAGPPLH-DPKTLGVGSAIGVRKDDDALRTQINQALASLIQ 238 >gi|319790879|ref|YP_004152519.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315593342|gb|ADU34408.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 248 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 75/211 (35%), Gaps = 14/211 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L+ + V NG GFDV+ A+ + I+++ ++ K L SK Sbjct: 29 LRVATDATFPPMEFV-ENGKRTGFDVELVEAVGKTLGRK---IEWIDIDFKGLVPGLISK 84 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGT 154 + D+ T R+ + F Y G ++ I + + ++G + VQ GT Sbjct: 85 RFDMAVSAIYITDERKKV--VDFTVPYYAGGLVVMVKDGNTAIKAPADINGKKVSVQVGT 142 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + + K + + E+ +E+ R DA A Y T Sbjct: 143 KSVA----FTKEKYPQVQLMEVEKNQEMFNLVDIGRADAAVTGKPAAYQYVRTRPG---L 195 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 +LP+ I+ AI + E V+ Sbjct: 196 KVLPEQITTEEYGMAIRKDTPELTKAVNGAI 226 >gi|295700588|ref|YP_003608481.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] gi|295439801|gb|ADG18970.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1002] Length = 255 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 85/252 (33%), Gaps = 20/252 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + +F+ +A+ L+ GI+ +G KGFD Sbjct: 1 MKTPLMI-LCAALAFSSGAFAADANT---------LRLGIDPTYPPMDSKAPDGSLKGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + I + Q++ L ALQ+++ID + + T RE + F Sbjct: 51 VDLGNEICRRI---HAHCQWVELEFSGMIPALQARKIDAVLSSMAITEKRE--QQILFSS 105 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I + + + S L+G I VQ+GT E + + + ++ Sbjct: 106 KLFQFKSRLIARRGSSLAPTASGLAGKQIGVQSGTQFEGYALKNWTPLG--ANVVAYKSQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E+ A R R D L + + +S I E Sbjct: 164 DEVFADLRNGRLDGALLGTVEADYGFLRTPAGKGFAFVGEPLSMGDRGVGIGLRKDETG- 222 Query: 240 IVSWTHYAMVTA 251 V + A + + Sbjct: 223 -VQASINAAIAS 233 >gi|238798472|ref|ZP_04641952.1| Glutamine-binding periplasmic protein [Yersinia mollaretii ATCC 43969] gi|238717710|gb|EEQ09546.1| Glutamine-binding periplasmic protein [Yersinia mollaretii ATCC 43969] Length = 247 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 77/220 (35%), Gaps = 13/220 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 L +T V F + + + GFD+D A++ + P++ A Sbjct: 23 AEKELIVATDTAFVPFEFKQGD-KYVGFDIDLWDAIAKKLDVKY---TLKPMDFSGIIPA 78 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150 LQ+K +D+ T R+ + F Y G ++ I + L+G + V Sbjct: 79 LQTKNVDLALAGITITDERKK--AVDFSDGYYNSGLLVMVKADNNEIKGEADLAGKVVAV 136 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++GT + DY KA+ F ++ R DA D + T Sbjct: 137 KSGTGSV----DYAKANIKTKDLRQFPNIDNAYLELGTGRADAVLHDTPNILYFIKTAGN 192 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + + D I A QG ++ + V+ ++ Sbjct: 193 G-QFKAVGDSIKAQQYGVAFPQG-SDLRDKVNVALKSLKE 230 >gi|315646647|ref|ZP_07899764.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus vortex V453] gi|315277973|gb|EFU41294.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus vortex V453] Length = 480 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 36/283 (12%), Positives = 93/283 (32%), Gaps = 25/283 (8%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55 M + F ++++ +++L F S ++ + G + + + Sbjct: 1 MKRKFTAWMTLFMVVVLSFGSIVHAEG------EKKTVILGTSADYAPYEFHKTIDGVDT 54 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D + ++ + + + + L S ++D + + T R Sbjct: 55 IVGFDIDIAKEIAKDLGAE---LIIKDTSFDALLPELTSGRVDFVISGMNPTEERRK--S 109 Query: 116 LAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F Y Q ++ K+ +++ L GA I VQ + E KA+ Sbjct: 110 IDFSEPYYAAEQSVVVRKEDALKFNTLESLEGARIGVQKSSIQESIAKTIPKAN-----V 164 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + +++ ++ + R D + A + +G Sbjct: 165 VSLDKIPDLLLQLESERVDVVLAEYPIAKTNMDEAT--MAITDAKPTAENDSYAIGVRKG 222 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 + E + ++ T + ++ + ++ T ++ F Sbjct: 223 NEELLSSINATLERLKENNQIQKFVDEASDLAAGRTTENLNTF 265 >gi|225352760|ref|ZP_03743783.1| hypothetical protein BIFPSEUDO_04390 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156367|gb|EEG69936.1| hypothetical protein BIFPSEUDO_04390 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 517 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 81/260 (31%), Gaps = 14/260 (5%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 V++ LI ++ + +K + G +T F NG G D++ Sbjct: 25 ILIVAVSALIASPVSANAAEIGDPSAVKGK-TYAVGTDTTFAPFEYR-ENGKMTGIDMEL 82 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 RA++ + ++ L AL S Q+D++ T R+ + F + Sbjct: 83 IRAIAQE---EGFEVTIQSLGFNAALQALSSNQVDVVIAGMSITDERKAT--YDFSNPYF 137 Query: 124 FDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G I I+S L G ++ + G+ E + + ++ + Sbjct: 138 QSGIQMAIAENNDSITSYKDLDGKTVVAKTGSEGESYAKQHASEYGY--TVTSVDQSSTM 195 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT-EWYNIV 241 ++ DA D L ++ P + A+ +G + + Sbjct: 196 YEMVKSGNADAVFDDYPVLAYGVSQ--NNGLKIVTPKVPHGE-YGMAVNKGKNADLLAAI 252 Query: 242 SWTHYAMVTAEELGITQKNI 261 ++ + E Sbjct: 253 DDGLNKLIASGEYETIVAQY 272 >gi|257140949|ref|ZP_05589211.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis E264] Length = 260 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 74/223 (33%), Gaps = 13/223 (5%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 K ++ G++ F +G GFDVD + + +K ++ + Sbjct: 21 QAKDWSTIRFGVDASYPPFESKGPDGKVVGFDVDLGNEICKRV---KAKCVWIENDFDGM 77 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGAS 147 AL++++ D + + T RE + F + + K + + L G + Sbjct: 78 IPALKARKFDGVLSSMSMTPQREEQIA--FSSKLFNTPTRLVTKKGANLMPTAESLKGKT 135 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + V+ GT E ++ + ++ +++ A A R DA D L Sbjct: 136 VGVEQGTIQETYAKVHWAPKG--VNIQPYQNQDQVYADLIAGRLDAALQDAVQADIGFLK 193 Query: 208 NDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 R + ++ + + DT+ + Sbjct: 194 TPRGKDFAFAGSDLNDPKTLGEGAGIGLRKEDTDLKAKIDKAI 236 >gi|167589680|ref|ZP_02382068.1| glutamine ABC transporter periplasmic protein [Burkholderia ubonensis Bu] Length = 250 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 79/235 (33%), Gaps = 18/235 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ ++ + + +A L G +T + F + + + GFD Sbjct: 1 MSRRSFLKTAVVVAML-GASVAHADT-------KTLVVGTDTSFMPFEFKQGD-KYVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ P++ ALQ++ ID+ R+ ++ + P Sbjct: 52 LDLWAEIAKDQGWKY---TIQPMDFAGLIPALQTQNIDVALSGMTIKEERKKAIDFS-AP 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + I S+ L+G I + GT T D+ KAH F ++ Sbjct: 108 YYDSGLAAMVQTGNTTIKSIDDLNGKVIAAKTGTATI----DWIKAHLKPKEIRQFPNID 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + A A R DA + + N+ + + +S +G Sbjct: 164 QAYLALEAGRVDA-AMHDTPNVLFFVNNEGKGKVKVAGQPVSGDKYGIGFPKGSP 217 >gi|330684749|gb|EGG96444.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU121] Length = 486 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 82/259 (31%), Gaps = 23/259 (8%) Query: 1 MY---KDFFVSILCLIILFFT----SFSTNASI-LGDIKKRGFLKCGINTGLVGFAE-VK 51 M K F V ++ + + IK+ G L+ G++ Sbjct: 1 MKYFIKVFLVFLIIVGSTLTMKQPNINAEENDTNWQKIKESGELRVGLSADYAPMEFEKN 60 Query: 52 ANGD--WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 ANG + G D++ + ++ + K++ + + AL++ +IDI+ T Sbjct: 61 ANGKTEYAGVDIELAKKIAKD---NHLKLKIINMQFDSLLGALKTGKIDIIISGMTTTPE 117 Query: 110 REISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 RE ++F ++ K + S+S I VQ GT E + Sbjct: 118 REK--EVSFTKPYMMTNNIMLVKKNEKNHLKSISDFKDKKIAVQKGTDQEKIAKTEIE-- 173 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 ++ E + ++ + + A N + K P Sbjct: 174 --NADVTSLNKLPETILSVKSGKTVGAILEKPVAEAYIKQNPE-LAFSDVKFNEEKKPTC 230 Query: 228 PAIIQGDTEWYNIVSWTHY 246 A+ + ++ T Sbjct: 231 IAVPKNSPILLKKLNQTIN 249 >gi|293606726|ref|ZP_06689079.1| ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292814876|gb|EFF74004.1| ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 263 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 77/231 (33%), Gaps = 13/231 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + + A LGDI KRG L+ + T + + +G+ G V Sbjct: 4 IKQWLGVASVAFAAATVALPAQADELGDIIKRGELRVAVQTSGPLMSFMDKSGNRTGLAV 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + + ++ + Y K AL S + D+++ + T R + F Sbjct: 64 EVAKRMADDLGVKLVLQDY---EWKGLLPALLSGKADMVAADMTPTPQRAA--QVLFSAP 118 Query: 122 TYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ ++ K S +L G ++ V +T MK V Sbjct: 119 MFYAETVAVVPKDSPYKSYEELDKAGVNVGVLGASTYAEVGKKMLPKATMKEFSGGSAPV 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + R DA +S + +L ++ + PLA A+ Sbjct: 179 GQA---LSSGRLDAGIMSMSTANQFLVDFGN---LRVLDGVMVREPLAFAV 223 >gi|126657487|ref|ZP_01728643.1| binding protein of ABC transporter component [Cyanothece sp. CCY0110] gi|126621191|gb|EAZ91904.1| binding protein of ABC transporter component [Cyanothece sp. CCY0110] Length = 297 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 91/251 (36%), Gaps = 13/251 (5%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 MYK +++ + S S +++ + + G L LV +A V + G+ Sbjct: 1 MYKKLPLITLSLITAFILPSRSLAETVIERVARTGILNVSTKVDLVPYAYVNDEDELVGY 60 Query: 60 DVDFCRAL----SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 V+ + + I D + ER +L ++++DI +T +T R+ Sbjct: 61 SVELIELIRETLAKEIGKDVQIKVIVDDTLDERISSLLNREVDIAC-DTTFTWQRDRF-- 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + F G + + +SS I + + ++ + + Sbjct: 118 VDFSLAYGISGIKVFVRENSNLSSRESFKNKRIAIIESVLSPESIKVIE----SQVTIVN 173 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGD 234 + +E A D + D + L + T P + ++PD +A + + D Sbjct: 174 VDSIEAGIKAVEDGEVDGFAFDGTILEGTRQTLTNPDAYKVVPDESYFKHGIACMVPEQD 233 Query: 235 TEWYNIVSWTH 245 + + N+V+ T Sbjct: 234 STFLNLVNLTI 244 >gi|322411920|gb|EFY02828.1| putative ABC transporter (binding protein) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 287 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 76/227 (33%), Gaps = 10/227 (4%) Query: 1 MYKDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + + L L T+ ++ S IK++G LK + + + Sbjct: 1 MKKSVTLLFIGLASLLLTACASHPSQESSWDAIKEKGVLKVATPGTYQPTSFYNDDNELV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G++VD + + + K++++ + F ++ S ++DI N D T R+ ++ Sbjct: 61 GYEVDMVKEIGRRL---DIKVKFVETGFDQAFTSVDSGRVDISLNNFDITPKRQKKYHIS 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 G + S LS AG + + + K Sbjct: 118 TPYKYGVGGM-IVRADGSSNMSKKDLSDWKGKKAAGASGTEYMK-VAQKQGAKLVTYDNV 175 Query: 178 RVEEIDAAYRAHRCDAYTGDISAL--YALKLTNDRPSEHVILPDIIS 222 + R D D A + + + P+ +V + D+ Sbjct: 176 TGDVYLNDVANGRTDFIPNDYPAQKLFVDYMLSQNPNLNVKMSDVQY 222 >gi|218887771|ref|YP_002437092.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758725|gb|ACL09624.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 288 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 82/221 (37%), Gaps = 11/221 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + S++ + +RG L+ G +T V +A G + GF+VD L+ + ++++ Sbjct: 45 SEESVIAGVLERGVLRVGFST-FVPWAMQDVTGKFIGFEVDVATRLADDLGVK---VEFV 100 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISS 139 P AL + + D++ + +L + F + G + ++ ++ Sbjct: 101 PTKWSGIIPALLTGKFDVIIGGMSV--KPDRNLKVNFTIPYDYAGMALMANRATAKGFTT 158 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + + + A T + A K + +F+ + R A Sbjct: 159 LDDFDKPEVTIAARTGSTAAAA--AKKRLPRATLRLFDDEAPAIQEVLSGRAHAMVSSAP 216 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 L N + +P + P+A A+ +GD + N+ Sbjct: 217 LPAFEVLKNPDKL-FLPVPGTFTSEPVAFAVRKGDVDTLNV 256 >gi|88800375|ref|ZP_01115941.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Reinekea sp. MED297] gi|88776952|gb|EAR08161.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Reinekea sp. MED297] Length = 262 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 81/236 (34%), Gaps = 11/236 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K ++ +L S A L +I+ + + F+ V +G+ GFDV Sbjct: 4 IKKTRQALTVAALLVALPLSLQARDLDEIQD-DVFQVVNSGAYPPFSFVDNSGNLVGFDV 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D +AL+ + + + AL + D + T R L F Sbjct: 63 DIAKALAEKMGVE---VNVQSSPWNGIIAALAGGRFDACICSMSNTEERRKV--LDFTDS 117 Query: 122 TYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ ++S+ +G + G T + N + F+ + Sbjct: 118 YYSAGLSVWVQEDNNDVNSIEDFAGKRVGSTLGETGNQWAVENA---NGNWRNQTFQGLP 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ A R D GD + ND + V + ++ + P A +I Q + Sbjct: 175 DMLNALTTGRIDIMIGDDVPVLLAVKKNDTKIKMVDVGEL-PRWPAAISIQQDKPQ 229 >gi|148255507|ref|YP_001240092.1| cyclohexadienyl dehydratase [Bradyrhizobium sp. BTAi1] gi|146407680|gb|ABQ36186.1| cyclohexadienyl dehydratase [Bradyrhizobium sp. BTAi1] Length = 263 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 73/231 (31%), Gaps = 10/231 (4%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFC 64 I L + + + AS L +I +RG L+ G+ F + A G + GFDVD Sbjct: 11 LTGIALLWGVASAALAEQASRLDEIMQRGSLRVGMTGDYKPFTYLDKATGKFSGFDVDMA 70 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 AL A+ ++++P + + ++ + D+ TL R+ + + Sbjct: 71 EALGKALGVK---VEFVPTSWPQLMKDFEADKFDVAMGGVSITLDRQKKGLFSTPIMREG 127 Query: 125 DGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 ++S + G + V G T E KA V I Sbjct: 128 KTPIARCSDTSKYQTLSDIDKPGTRVIVNPGGTNERFARANVKAA----DIRVHNDNVTI 183 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 D D S + + V S A + + Sbjct: 184 FEEIAKGDADLMMTDASETRYQQKLHPGVLCAVHPDKPFDFSEKAYWLQRD 234 >gi|251790086|ref|YP_003004807.1| glutamine ABC transporter periplasmic protein [Dickeya zeae Ech1591] gi|247538707|gb|ACT07328.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] Length = 248 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 74/212 (34%), Gaps = 12/212 (5%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L +T V F + + + GFD+D A++ + P++ ALQ++ Sbjct: 27 LIVATDTAFVPFEFKQGD-KYVGFDIDLWDAIARQL---NLTYTLKPMDFSGIIPALQTR 82 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGT 154 +D+ T R+ + F Y G ++ + + L+G + V++GT Sbjct: 83 NVDLALAGITITEERKR--AIDFSDGYYNSGLLVMVRADNQDVKGEQDLAGKVVAVKSGT 140 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + DY KA+ F ++ +R DA D + T Sbjct: 141 GSV----DYAKANIKTKELRQFPNIDNAYLELGTNRADAVLHDTPNILYFIKTAGNGK-F 195 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + D I A +G + N V+ Sbjct: 196 KAVGDSIKAQQYGIAFPKGSDDLRNKVNGALK 227 >gi|261493137|ref|ZP_05989672.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495782|ref|ZP_05992218.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308547|gb|EEY09814.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311192|gb|EEY12360.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 259 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 71/211 (33%), Gaps = 13/211 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K SI L + S S+L I +G + G + A+G G+D Sbjct: 3 MLKKL--SIAALALTLSVSAFAKESLLERINNKGTITVGTEGTYAPYTYHDASGKLTGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ RA++ + K+++ L+ ++ D+++ T E Sbjct: 61 VEVTRAVAEKL---DVKVEFKETQWDAMLAGLKGERFDLVANQVALT-SPERRATFDKSE 116 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +DG ++ + I + + + G V+ T + + + + + + Sbjct: 117 SYSWDGAALLVREDETKIKTPADVKG----VKTAQTLSSNYGEIARENGAD--IVPIDGM 170 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + R DA +L N Sbjct: 171 AQGLLLIQQKRADATFNSHLSLLDYLKKNPN 201 >gi|167587915|ref|ZP_02380303.1| extracellular solute-binding protein family 3 [Burkholderia ubonensis Bu] Length = 260 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 75/251 (29%), Gaps = 22/251 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M L + + L+ G+ F NGD +GFD Sbjct: 1 MKHLKLWLALACAFGSGAACADGQQT---------LRFGLEAQYPPFESKAPNGDLQGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ +++ + ALQ ++ D ++ + T R + F Sbjct: 52 IDVGNAVCQ---TAKLSCKWVETSFDGLIPALQGRKFDAINSAMNATEQR--RQAIDFTT 106 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I Y I G+ + L G + V + E +++ + + ++ Sbjct: 107 IIYRVPTQLIARNGSGLQPTPESLKGKRVGVLQASIQETYAKAHWEPAGVS--VVAYQDQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGD 234 + A A R DA + L+ + + +A + +GD Sbjct: 165 NQAYADLVAGRVDATLVLAPSGQRGFLSRPDGKDFSFAGQPVRDDRILGNGIAFGLRKGD 224 Query: 235 TEWYNIVSWTH 245 ++ Sbjct: 225 DALKAKLNAAI 235 >gi|171779932|ref|ZP_02920836.1| hypothetical protein STRINF_01719 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281280|gb|EDT46715.1| hypothetical protein STRINF_01719 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 743 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 86/250 (34%), Gaps = 15/250 (6%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 SI+ L T ++ + +K + +++ F +G ++G DVD +A Sbjct: 265 SSIVASSSLKLTGDASAKATP--VKSTYKIV--MDSSFAPFEYQNDSGKYEGIDVDLIKA 320 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + I+ A+Q+ Q D + T R+ F Y Sbjct: 321 IAEQQGFN---IEISNPGFDAALNAVQASQADGVMAGMSITDARKEI--FNFSDPYYTSN 375 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 + K + S L+G ++ + GT++ L+++ + F+ + + Sbjct: 376 ILLAVKKGSSVKSYEDLNGKTVGAKNGTSSYTWLSEHAAQYGY--TLRAFDEASTMYDSL 433 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTH 245 + +A D L+ + D A+ +G + E + + Sbjct: 434 NSGSINALMDDE---AVLRYAIKQGRNFETPVDGEKSGEYGFAVNKGANPELLEMFNNGL 490 Query: 246 YAMVTAEELG 255 A+V + E Sbjct: 491 AALVKSGEYD 500 Score = 99.8 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 66/210 (31%), Gaps = 15/210 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +L ++ F K + +T F ++ +KG D Sbjct: 10 MKHKLKAIMLAMVSAIFVFGVDA--------KADTISIVSDTAYAPFEFKDSDQTYKGID 61 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +++ D I A+Q+ Q D L T T R+ F Sbjct: 62 VDIINEVANREGWD---IDMTFPGFDAAVNAVQAGQADALMAGTTVTEARKKV--FTFSD 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y +S+ QLSG ++ V+ GT + L + K + K F+ + Sbjct: 117 TYYDTAVVVYTRSDAKVSNYKQLSGKTVGVKNGTAAQAFLKENQKKYGYK--IKTFDTSD 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + A A D + Sbjct: 175 LMNNSLDAGSVYAAMDDQPVVQYAISQGKN 204 >gi|27468459|ref|NP_765096.1| glutamine-binding periplasmic protein [Staphylococcus epidermidis ATCC 12228] gi|27316006|gb|AAO05140.1|AE016749_86 glutamine-binding periplasmic protein [Staphylococcus epidermidis ATCC 12228] Length = 485 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 77/251 (30%), Gaps = 16/251 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M + + + S N IK RG L+ G++ + ++ Sbjct: 7 MLSIIIIMLSTFTLFISPSTYANEDENWTKIKNRGELRVGLSADYAPLEFEKTIHGKTEY 66 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ + ++ + K++ + + AL++ +IDI+ T R+ + Sbjct: 67 AGVDIELAKKIAKD---NHLKLKIVNMQFDSLLGALKTGKIDIIISGMTTTPERKK--EV 121 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F ++ K ++ G +I Q GT E + Sbjct: 122 DFTKPYMITNNVMMIKKDDAKRYQNIKDFEGKTIAAQKGTDQEKIAQTEIE----DSKIS 177 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 R+ E + ++ + + A N + K A+ + Sbjct: 178 SLNRLPEAILSLKSGKVAGVVVEKPVGEAYLKQNSE-LTFSKIKFNEEKKQTCIAVPKNS 236 Query: 235 TEWYNIVSWTH 245 + ++ T Sbjct: 237 PVLLDKLNQTI 247 >gi|327441797|dbj|BAK18162.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Solibacillus silvestris StLB046] Length = 278 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 38/243 (15%), Positives = 80/243 (32%), Gaps = 14/243 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-------ILGDIKKRGFLKCGINTGLVGFAEVKANG 54 K F+ + +IL T+ + D K+ L G + F V +G Sbjct: 5 KKLSFLVLFSALILLLTACGNDGGAGSPSKETNADSGKKEVLVVGSSGIYPPFISVDEDG 64 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 +G+DV+ + A+ + I++ F L + +ID +S T R Sbjct: 65 KAQGYDVEVLEKVGEALGYE---IKWEFAEFSGIFGMLDAGKIDTVSNLIAMTEERRA-- 119 Query: 115 GLAFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + G + + I+S+ L G + V G L + + + + Sbjct: 120 KYDFSTPYAYSGATLVVHEENNSINSIEDLKGKKVGVLLGNNLHQFLEKWNEENGGEIII 179 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 ++ V R DA+ A ++ ++ + + + ++ Sbjct: 180 TPYQDVSGTYNEVALGRLDAFIDVK-ITAASRIRDEGLPLKIYGEEYLVNFDYGFPFVRS 238 Query: 234 DTE 236 + Sbjct: 239 EEN 241 >gi|312883096|ref|ZP_07742827.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309369256|gb|EFP96777.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 279 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 82/242 (33%), Gaps = 7/242 (2%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K F++ +++ SF+T L I +RG ++ G++T V +A GD GF++ Sbjct: 13 RKLAFLAATVSVLVCSPSFATTTPNLDKINERGTIRVGMST-FVPWAMRNKQGDLIGFEI 71 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L+ ++++P AL +K+ D++ T R S + F Sbjct: 72 DVAKRLAKDSGWK---VEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSILFSVP 126 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G +K S S ++ + K + F+ + Sbjct: 127 YSHSGVQLAANKALANGFSSMADFNSRRIKIAARRGAYTVQVARETFPKAKILQFDDDSQ 186 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + + + +SK A A+ G+++ N Sbjct: 187 AFQEVLNGNAHAVIASSPKPEFETIRHKD-QLFLPFGQRLSKGNEAFAVRLGESDKQNFF 245 Query: 242 SW 243 + Sbjct: 246 NQ 247 >gi|52840736|ref|YP_094535.1| amino acid (glutamine) ABC transporter, periplasmic amino acid binding protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627847|gb|AAU26588.1| amino acid (glutamine) ABC transporter, periplasmic amino acid binding protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 244 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 43/228 (18%), Positives = 71/228 (31%), Gaps = 13/228 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K + L+ + F + NG+ KGFD+D + ++ + + + + Sbjct: 23 KNQNTLRFSTSAEYPPFEYI-ENGEIKGFDIDLAKLIAKELGKEA---VFDNMQFSTVLP 78 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 AL S Q D+ T E F YF+G + + + +SQL+G I V Sbjct: 79 ALNSGQDDVAIATITITE--ERKKNFDFSIPYYFEGMAAVFDISQPVKEISQLTGKKIAV 136 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q GT E+ L F + + A A D D + Sbjct: 137 QLGTVMEIWLHQNFP----NAEITALDNNNQAIEALIAGHVDVVLMDGAQGGVYSKKYP- 191 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + IL + +G I S E + Sbjct: 192 GLSYSILAKAN--EGYGLVLKKGSPLRDEINSALENLKAKGEIQKLES 237 >gi|88856490|ref|ZP_01131148.1| putative transporter substrate-binding protein [marine actinobacterium PHSC20C1] gi|88814357|gb|EAR24221.1| putative transporter substrate-binding protein [marine actinobacterium PHSC20C1] Length = 295 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 83/275 (30%), Gaps = 36/275 (13%) Query: 1 MYKDFFV-SILCLIILFFTSF--------------------STNASILGDIKKRGFLKCG 39 M F + +IL L T + A + DIK G L G Sbjct: 1 MRIKFAMPAILAATALVLTGCVDNSTGTSTGGEGPVVGTDAAAIALLPDDIKAAGVLVIG 60 Query: 40 INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 I+ G+ G++VD A+++ + + QY P + + ++ +I Sbjct: 61 IDPTYAPNEYKDDAGNPIGWEVDLGNAMAAKLGLET---QYEPSSFDKIIPSVTGGSYNI 117 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE-- 157 + RE + F Q + + G ++ VQ GT E Sbjct: 118 GLSSFTDNEEREKV--VDFVNYYEAGIQ--WAQQIGVDVDPANACGMTVTVQTGTYEETD 173 Query: 158 ---LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + A + F+ +E A R DA + D E Sbjct: 174 ELPAKSQECTDAGKDPIDILKFDTQDEATNALALGRADAMSADSPITQYAVSKVADKIEL 233 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 + +P + + D+E + +++ Sbjct: 234 A--GESFDTAPYGIVVQK-DSELSAALQAALQSLI 265 >gi|256849332|ref|ZP_05554765.1| glutamine ABC transporter permease [Lactobacillus crispatus MV-1A-US] gi|256714108|gb|EEU29096.1| glutamine ABC transporter permease [Lactobacillus crispatus MV-1A-US] Length = 494 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 39/265 (14%), Positives = 85/265 (32%), Gaps = 29/265 (10%) Query: 1 MYK-----DFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGF 47 M K F I L LF + NA S++ IK+ L G + Sbjct: 1 MKKAKIIKTFLAFITMLSTLFLFNQPVNAANKEVETGSVMKKIKQSKELVVGTSADYPPL 60 Query: 48 AEV---KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 N + G D++ + ++ + +K+ ++ +AL++ ++D++ Sbjct: 61 EFTTSENDNTKYVGVDIELAKDIAKDL---HAKLVIKNMSFDSLLVALETGKVDMVISAM 117 Query: 105 DWTLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 R+ + F I Y + + +G ++ Q G+ + Sbjct: 118 TPNPERKK--SVDFSKIYYKPSGEYFLINKRDQAKYKKIKDFAGKTVGAQTGSIQYSLIQ 175 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 K + ++ + A ++++ + ND V Sbjct: 176 KQMK----QSKVKGLGKINNLVLALKSNKISGIVMEEM-TAKAYQQNDNSLMAVRSDLRE 230 Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHY 246 ++ A AI +G + V+ T Sbjct: 231 QQAGNAVAIAKGQNDLVAAVNKTIN 255 >gi|163857807|ref|YP_001632105.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Bordetella petrii DSM 12804] gi|163261535|emb|CAP43837.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Bordetella petrii] Length = 263 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 73/232 (31%), Gaps = 13/232 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + + + A L DI KRG + + T + + +G G V Sbjct: 4 IKQWLGVAALALTAASVATVARADALSDILKRGEFRVAVQTSGPLMSFMDKSGKRTGLAV 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + R ++ + Y K AL S + D+++ + T R + F Sbjct: 64 ELARRMADDLGVKLVLQDY---EWKGLIPALLSGKADMVAADMTPTPQRAA--QILFSAP 118 Query: 122 TYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ ++ K S + L+ +I +T +K V Sbjct: 119 MFYAETVAVVPKDSPYKSYTDLNKGDVTIGALGASTYAEAARKMLPEAKLKEFSGGSAPV 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + R DA +S +L ++ + PLA A+ Sbjct: 179 GQAI---SSGRLDAGIMSLSTANQFLADFGN---LRVLDGVMVREPLAFAVA 224 >gi|238757265|ref|ZP_04618452.1| Glutamine-binding periplasmic protein [Yersinia aldovae ATCC 35236] gi|238704643|gb|EEP97173.1| Glutamine-binding periplasmic protein [Yersinia aldovae ATCC 35236] Length = 239 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 82/242 (33%), Gaps = 21/242 (8%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + + L F + A L +T V F + + + GFD+D A++ Sbjct: 1 MAALTLAFAVNTYAAE--------KELIVATDTAFVPFEFKQGD-KYVGFDIDLWDAIAK 51 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + K P++ ALQ+K +D+ T R+ + F Y G Sbjct: 52 KL---DLKYTLKPMDFSGIIPALQTKNVDLALAGITITDERKK--AVDFSDGYYNSGLLV 106 Query: 130 IMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ I S + L G + V++GT + DY KA+ F ++ Sbjct: 107 MVKANNNDIKSEADLKGKVLAVKSGTGSV----DYAKANIKTKDLRQFPNIDNAYLELGT 162 Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 DA D + T + + + I A QG ++ V+ ++ Sbjct: 163 GNADAVLHDTPNILYFIKTAGNG-QFKAVGEPIKAQQYGVAFPQG-SDLREKVNAALKSL 220 Query: 249 VT 250 Sbjct: 221 KE 222 >gi|45358787|ref|NP_988344.1| ABC-type amino acid transport/signal transduction systems periplasmic component-related [Methanococcus maripaludis S2] gi|45047653|emb|CAF30780.1| ABC-type amino acid transport/signal transduction systems periplasmic component-related [Methanococcus maripaludis S2] Length = 254 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 78/217 (35%), Gaps = 11/217 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 G L GI + +G+ KGFD+D + +++ + P + AL Sbjct: 36 GVLTVGITPEMPPQQYY-EDGELKGFDIDLMKEIANNMGLKPE---FKIYEYGGAHEALL 91 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 + +ID L T+ E + F + + + L+G +I V Sbjct: 92 NGEIDCLP---SMTISPERKEDMDFSRAYIQTYVVVAVFENSPYRELKDLNGKNIAVVTN 148 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 T TE +Y + N + ++ VE + + + DA D L + E Sbjct: 149 TYTEDWAKEYLGSLN--ANIKSYDSVEGLVSDVYSGNIDAVVTDQIQL--DYYSKQNNFE 204 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 ++ + ++ A A+ + + N ++ + + Sbjct: 205 SRLIFEKMTIEYWAIAVKKDNHNLQNEINDVLFELDE 241 >gi|157150220|ref|YP_001450326.1| glutamine ABC transporter permease and substrate binding protein [Streptococcus gordonii str. Challis substr. CH1] gi|157075014|gb|ABV09697.1| glutamine ABC transporter permease and substrate binding protein [Streptococcus gordonii str. Challis substr. CH1] Length = 485 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 72/237 (30%), Gaps = 14/237 (5%) Query: 1 MYKDFFVSILCLIILFFTSFST--NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + +L L + S +K ++ F N + G Sbjct: 1 MKQKIIALLLTFSALLTFASSVVHAEDKATPVKS--KYVISSDSSFAPFVFQDNNNQYTG 58 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D+D +A++ + I +Q+ D + T R+ + F Sbjct: 59 IDMDLIKAIAKDQGFN---ITIKNPGFDVALNDVQTGHADGMIAGMTVTDARKKT--FDF 113 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + K ISS L G ++ V+ GT+++ L D K + K F Sbjct: 114 SDSYYSANSILAVAKSSTISSYEDLKGKTVGVKNGTSSQTFLTDNQKKYGYK--IKTFSD 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + + A D + + + + LA A+ +G Sbjct: 172 GASLYDSLNSGSVAAIMDDEPVI---RYAIKQGKKFKTPIKGTPSGKLAFAVKKGSN 225 >gi|86607415|ref|YP_476178.1| amino acid transporter, amino acid-binding protein [Synechococcus sp. JA-3-3Ab] gi|86555957|gb|ABD00915.1| amino acid transporter, amino acid-binding protein [Synechococcus sp. JA-3-3Ab] Length = 266 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 75/227 (33%), Gaps = 9/227 (3%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++ + A +I + G ++ + L G +GF+++ R Sbjct: 16 MAAGLALACLGRGIPAAARPWPEIVRSGQVRIAVKDNLRPLGFRDPMGKLQGFEIELARE 75 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L S + ++ +P+ +R A+ + ++D+ T R + F Y DG Sbjct: 76 LGSRLLGSAEAVELVPVANVKRLQAVAAGEVDLAIAQLGITPDRAR--QVEFTSPYYQDG 133 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++ + S + GA I V G+ L Y + + E Sbjct: 134 PSLVVARSHNWERWSDVGGARIAVLRGSAAIPYLQRYLP----GVELVAVDSYREGAELL 189 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 A+ D S L + + L ++ L A+ +G Sbjct: 190 LKGAVQAWAADRSVLAGWLAEHP---QFQFLGSPLAAVGLGIALPKG 233 >gi|238025448|ref|YP_002909680.1| cationic amino acid ABC transporter periplasmic binding protein [Burkholderia glumae BGR1] gi|237880113|gb|ACR32445.1| Cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia glumae BGR1] Length = 260 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 76/224 (33%), Gaps = 13/224 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K ++ G++ F A+G GFD+D + I +K ++ + Sbjct: 23 KDWSTVRFGVDASYPPFESKGADGKLVGFDIDLGNEICRRI---AAKCVWVENDFDGLIP 79 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASIC 149 AL++++ D + + T R + F + + K I + + L G ++ Sbjct: 80 ALKARKFDGVLSSMSMTPQRAEQIA--FSDKLFNTPTRLVAKKGSNILPTAASLKGKTVG 137 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ GT E Y+ + ++ +++ A + R DA D L Sbjct: 138 VEQGTIQETYAKTYWAPKG--VNVQPYQNQDQVYADLLSGRLDATLQDAVQAEIGFLKTP 195 Query: 210 RPSEHVIL-----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R + + + + DT+ + AM Sbjct: 196 RGAGYAFAGGDIDDPKTLGEGAGVGLRKEDTDLKAKIDGAIVAM 239 >gi|152999486|ref|YP_001365167.1| extracellular solute-binding protein [Shewanella baltica OS185] gi|160874106|ref|YP_001553422.1| extracellular solute-binding protein [Shewanella baltica OS195] gi|151364104|gb|ABS07104.1| extracellular solute-binding protein family 3 [Shewanella baltica OS185] gi|160859628|gb|ABX48162.1| extracellular solute-binding protein family 3 [Shewanella baltica OS195] gi|315266338|gb|ADT93191.1| extracellular solute-binding protein family 3 [Shewanella baltica OS678] Length = 244 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 70/224 (31%), Gaps = 16/224 (7%) Query: 31 KKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 K L G N F V + KGFD+D + ++ ++ + Sbjct: 23 KSDDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIDLAKQIAKDAGK---TLKVENMKFDSL 79 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 +AL S +ID ++ T R+ ++ + P + I ++ + G Sbjct: 80 IVALNSGKIDFIASGMTITAERQANVNFS-EPYYEATQVVLVNKDNDSIHTLEDIKGKHF 138 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 VQ GTT + + + F E + + D D N Sbjct: 139 AVQLGTTAD------IMSKKYTQNITAFNTGFEAIMELKNAKVDLVLFDSEPAANYLAKN 192 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 E ++ A+ + E ++ T A + A+ Sbjct: 193 P---ELKMIKLDFPAEFYGFAVSKEQPELLASINKTL-ANMKAD 232 >gi|329298257|ref|ZP_08255593.1| cationic amino acid ABC transporter periplasmic-binding protein [Plautia stali symbiont] Length = 243 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 83/250 (33%), Gaps = 25/250 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ + + + ++ + F + N GFD Sbjct: 1 MKKWIVAAVMATLAMNAYAAE-------------KIRFAASATYPPFESLDQNNQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +AL + ++ + +L+ ++ D + D T R S + F Sbjct: 48 IDLAKALCQQM---QAECTFTNNAFDSPIPSLKFRRYDAVISGMDITAER--SKQVDFTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I HK S SQL G I V+ GTT + L + + ++ + Sbjct: 103 PYYANSAIVIAHKG-EYSDFSQLKGKRIGVENGTTHQKYLLEKHPE----VIAVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R + GD + + N I + L A+ +G++ Sbjct: 158 NAILDLKNGRLNGVFGDSAVVNQWLKANADLSAVGEHITDSDYFGTGLGIAVRKGNSALL 217 Query: 239 NIVSWTHYAM 248 ++ A+ Sbjct: 218 QQLNSALAAL 227 >gi|307352567|ref|YP_003893618.1| extracellular solute-binding protein family 3 [Methanoplanus petrolearius DSM 11571] gi|307155800|gb|ADN35180.1| extracellular solute-binding protein family 3 [Methanoplanus petrolearius DSM 11571] Length = 269 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 22/259 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGD---------IKKRGFLKCGINTGLVGFAEVK 51 M + +IL LI+ FS G+ +++ GI+ ++ V Sbjct: 1 MTVKVYGAILVLILALAMVFSGCTDTSGENQTSTDGVNVEETTTYIVGIDGEYKPYSYVD 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G+ GFDVD + ++ + +++ +P+ AL + +ID++ T R Sbjct: 61 TDGNPVGFDVDSIKWIAEK---EGFEVEIIPVAWDGIIPALMAGKIDMVYSGMTITDKR- 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADYFKAHNMK 170 + F + Q ++ + +SG I Q+GT+ + + + Sbjct: 117 -LEQVNFSIPYWKVNQSVAINDVNNYTMDDFMSGKYIIGAQSGTSGAQWVEENLIDTGIM 175 Query: 171 YHP---IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 + + + R D D + L+ +P I+ +I + Sbjct: 176 PAENFKNTYSTFPLVSEDLKNQRIDFAIYDKPPM--LEAIEGKP--LSIIGEIDTNEEYG 231 Query: 228 PAIIQGDTEWYNIVSWTHY 246 AI + D E ++ Sbjct: 232 VAIRKSDVELLETINDGLT 250 >gi|28379591|ref|NP_786483.1| amino acid ABC transporter, substrate binding protein [Lactobacillus plantarum WCFS1] gi|300769531|ref|ZP_07079417.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|28272431|emb|CAD65355.1| amino acid ABC transporter, substrate binding protein [Lactobacillus plantarum WCFS1] gi|300492946|gb|EFK28128.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 267 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 87/256 (33%), Gaps = 22/256 (8%) Query: 1 MY---KDFFVSILCL-IILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVK 51 M K V++L L + + T+ +N S ++K G L G+ ++ Sbjct: 1 MKSWVKKLSVAVLGLGLAVTLTACGSNTSSSSKSNDLGLQKSGTLTIGLEGTFQPYSYR- 59 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G GF+VD +A++ + +++P L + + D++ N T R+ Sbjct: 60 KDGKLTGFEVDLGKAVAKKMGLKA---KFVPTKFDSLVAGLDTNKFDVVMNNMSETAARK 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F + + K IS ++ + G A TTT D A + Sbjct: 117 K--KYLFSTPYIYSKSQLAVKKNSSISKITDIKGKK---VAETTTSNNATD---AKRLGA 168 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAI 230 + ++ R + YA N + + +I D I+ + + Sbjct: 169 TITPTDSFQQSIDLVSQGRVAGTINSRESFYAYFKQNPKANIKLIDSGDHIASQKIGAIV 228 Query: 231 IQGDTEWYNIVSWTHY 246 + + +S Sbjct: 229 TKQHPKMQKQISKAIQ 244 >gi|311108047|ref|YP_003980900.1| extracellular solute-binding protein, family 3 family protein 8 [Achromobacter xylosoxidans A8] gi|310762736|gb|ADP18185.1| bacterial extracellular solute-binding protein, family 3 family protein 8 [Achromobacter xylosoxidans A8] Length = 261 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 49/223 (21%), Positives = 90/223 (40%), Gaps = 12/223 (5%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L D+ G L+ G+ + A G+ G D+D + +++ + ++ + + Sbjct: 25 DKLQDVLGAGKLRVGVLMDAAPWGFKDAKGEAAGLDIDLAKLMAADMGVK---LELVQVT 81 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI-MHKKKGISSVSQL 143 R +L + ++D+L T R + + F G SV +L Sbjct: 82 GASRIPSLLAGKVDVLIAAAGATPER--AQQVMFSQPYAAVNLGVYGGDAMPQAKSVDEL 139 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G SI V G+T ++ L D + FE AAY A + +++ + + A Sbjct: 140 KGHSIAVAKGSTLDIWLTDNAP----GAKLVRFEDTPSAVAAYLAGQSESFAENSAI--A 193 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 LK+T D P+ L +I +SP A+ QG N ++ + Sbjct: 194 LKVTEDNPARAPQLKFLIRQSPAHAAVQQGQQNLLNWINTFLF 236 >gi|160895679|ref|YP_001561261.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160361263|gb|ABX32876.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 268 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 66/181 (36%), Gaps = 8/181 (4%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 +A +L +I+K G L+ I F + + +G+D+D ++ + ++ +P Sbjct: 31 HADMLANIQKAGVLRVAIPQDFPPFGSLGTDLKLQGYDIDMAALVAQELGVK---VELVP 87 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + + R L + + DI+ + R + F + K I + + Sbjct: 88 VTSTNRIPFLTTGKADIVISSLGKNAERAKV--IDFTQAYAPFPKSVYGPKDVSIKAPAD 145 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G ++ V G+T +L L A +E +Y + T Sbjct: 146 LAGKTVGVTRGSTEDLALTQVAPA---SATIKRYEDNNATAQSYLTGQVQLVTLGNIVAN 202 Query: 203 A 203 A Sbjct: 203 A 203 >gi|322372982|ref|ZP_08047518.1| polar amino acid uptake (PAAT) family ABC transporter, polar amino acid-binding protein [Streptococcus sp. C150] gi|321278024|gb|EFX55093.1| polar amino acid uptake (PAAT) family ABC transporter, polar amino acid-binding protein [Streptococcus sp. C150] Length = 282 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 70/256 (27%), Gaps = 18/256 (7%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K FF I L L +F + S+ +S I+KRG +K L + Sbjct: 1 MKKKFFAVISLALAAVFLVACSSQSSGEKNWEKIEKRGTIKVATAGTLYPQTYHDDKNNL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G+DV+ + + + KI + + A+ S Q+D N + Sbjct: 61 TGYDVEILKEVGKRL---KLKIDFTEMGVDGMLTAVNSGQVD--IANYSLEDDNKNVKKF 115 Query: 117 AFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + ++ GISS L G A T + Sbjct: 116 LRSEPYKYSFTSMVVRDSDNSGISSWKDLKGKKAAGAASTKYMKIAKKM----GAELVVY 171 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL--APAIIQ 232 + R D D V + D I +P + Sbjct: 172 DNVTNDVYMQDLVNGRTDVIVNDYYLQKMAVAAVKDKYP-VKINDGIYSNPYSTSFTFSL 230 Query: 233 GDTEWYNIVSWTHYAM 248 + V+ M Sbjct: 231 KNKVLQEKVNKAIKDM 246 >gi|296156702|ref|ZP_06839540.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] gi|295893301|gb|EFG73081.1| extracellular solute-binding protein family 3 [Burkholderia sp. Ch1-1] Length = 289 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 80/233 (34%), Gaps = 14/233 (6%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +IK RG+L F V A+G G+D D + I D ++ + Sbjct: 45 EEIKARGYLSVATEDDYTPFEFV-ADGKNTGYDNDLLALVRKKIGVD---VKQQVMPWSG 100 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 + + + D+ T R+ + F T + + K I S L G Sbjct: 101 ILPGVTTGKYDMALTAVLVTDERKKT--FDFASPTCEAVTFYAVKKGSTIKSPDDLVGKV 158 Query: 148 ICVQAGTTTELTLADYFKAHNMK------YHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 + + G+ L + + K + ++ E R DA +L Sbjct: 159 VGAETGSAMLADLKLFNEELKKKHGGNGLKQIVEYQSYPEAYQDLGLGRVDAVANTQISL 218 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 +L RP V+ I + +A A+ +G+++ +V + + E+ Sbjct: 219 NSL--VKTRPDTFVVGQAIGKPTYIAWAVKKGNSDVLKMVDAALLELRKSGEM 269 >gi|327193779|gb|EGE60656.1| extracellular solute-binding protein family 3 [Rhizobium etli CNPAF512] Length = 257 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 85/242 (35%), Gaps = 14/242 (5%) Query: 35 FLKCGI-NTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ N F A+G+W G+++D A+ + + K + ++ ALQ Sbjct: 23 EVRFGVMNESYPPFFAKDASGEWHGWEIDLMNAVCAEM---KEKCSIVDISWDGLIPALQ 79 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQA 152 SK+ D++ + T R + F Y I K + ++ + G +I +Q Sbjct: 80 SKKFDVIWSSMSNTAERSKV--IDFTDKYYNTPSTLIGPKDQKPGATAEDVKGKTIGIQV 137 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL-YALKLTNDRP 211 T YF ++ ++E + R D GD AL LK + Sbjct: 138 STIQSEYYKKYFAGA---AEEKTYQTLDEAFQDLASGRIDYVFGDSLALDAFLKSDGGKD 194 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 + K L + G + + A + A + ++K + Sbjct: 195 CCAKMGDVADDKEILGAGVSGGLRKEDTELKAKLNAAIAA---VRANGQYDAITKKYFDF 251 Query: 272 DV 273 D+ Sbjct: 252 DI 253 >gi|319937508|ref|ZP_08011913.1| arginine-binding extracellular protein artP [Coprobacillus sp. 29_1] gi|319807348|gb|EFW03957.1| arginine-binding extracellular protein artP [Coprobacillus sp. 29_1] Length = 252 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 87/257 (33%), Gaps = 15/257 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V ++ ++ + T+ + KK L GI+ + + + +GFD Sbjct: 1 MKKILKVMLVIMMAVMVTACGGGDNTDSGDKKETKLLIGISPDYPPYESLNTKNEMEGFD 60 Query: 61 VDFCRALSSAIFDDPSK--IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +D + L + + ++ ++ + ++++ Q+D+ + + Sbjct: 61 IDMTKELVDIMNKNGGNYSYEFKQMSFESIRSSVETDQVDLGISGFTKHDE----WDVEW 116 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Q ++ I + + L G + Q G T E D A Sbjct: 117 SHKYNDSKQVALIAGDSNIKTAADLEGKKVGAQVGATGETCAKDIKNA-----DVKAVTD 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 V+ + R DA D YA+ S ++ + + +G+TE Sbjct: 172 VKVLVETLRTGGVDAVILD----YAVAKNYVDNSGFKMIDQALLEEENLIISKKGNTELM 227 Query: 239 NIVSWTHYAMVTAEELG 255 N V+ V +++ Sbjct: 228 NAVNKALDEFVGSDKYN 244 >gi|256824981|ref|YP_003148941.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Kytococcus sedentarius DSM 20547] gi|256688374|gb|ACV06176.1| periplasmic component of amino acid ABC-type transporter/signal transduction system [Kytococcus sedentarius DSM 20547] Length = 290 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 79/214 (36%), Gaps = 13/214 (6%) Query: 34 GFLKCGINTGLVGFAE--VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 G L + F A+ + GFD+D ++ + + ++ + + LA Sbjct: 49 GKLTVCSDIPYAPFEFEDPDADSGYSGFDIDITSEIAKGLDLE-LAVKDADFSGLQSGLA 107 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 L S Q D+++ T R+ +LG F Y Q ++ + I+ + L+G + VQ Sbjct: 108 LNSGQCDLVASAMTITDDRKKNLG--FSDGYYDSLQSLLVPEGSDITGIGDLNGKKVGVQ 165 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 T+ E + + + E+ A +A + DA D+ N + Sbjct: 166 QATSGEKYAQENAE----GAQLVALPSNAEMVQAIKAGQVDALLQDLPVNV----DNAKA 217 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + ++ + + A + + + V+ Sbjct: 218 GGYEVVEEFDTGETYGLAAKKDNQALLDAVNAEL 251 >gi|126698330|ref|YP_001087227.1| amino acid ABC transporter substrate-binding protein [Clostridium difficile 630] gi|254974368|ref|ZP_05270840.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile QCD-66c26] gi|255091762|ref|ZP_05321240.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile CIP 107932] gi|255099866|ref|ZP_05328843.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile QCD-63q42] gi|255305754|ref|ZP_05349926.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile ATCC 43255] gi|255313492|ref|ZP_05355075.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile QCD-76w55] gi|255516180|ref|ZP_05383856.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile QCD-97b34] gi|255649276|ref|ZP_05396178.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile QCD-37x79] gi|260682447|ref|YP_003213732.1| amino acid ABC transporter substrate-binding protein [Clostridium difficile CD196] gi|260686046|ref|YP_003217179.1| amino acid ABC transporter substrate-binding protein [Clostridium difficile R20291] gi|306519376|ref|ZP_07405723.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile QCD-32g58] gi|115249767|emb|CAJ67584.1| ABC-type transport system, aminoacid-family extracellular solute-binding protein [Clostridium difficile] gi|260208610|emb|CBA61331.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile CD196] gi|260212062|emb|CBE02645.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile R20291] Length = 271 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 68/225 (30%), Gaps = 14/225 (6%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFD 73 S + L IK G L G + F V KGFD+ + + Sbjct: 22 GCSGGGEKTKLEQIKDNGKLVVGTSAEFPPFEFHKVVDGKDSIKGFDIMLAEEFAKELGV 81 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH- 132 ++ ++ AL + Q+DI+ T RE + F + Y I+ Sbjct: 82 K---VEIKDMSFDGLIGALNADQVDIVLAGMSPTPEREK--SVDFSELYYLSRNAVIVKD 136 Query: 133 -KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 + + L + VQAG+ E + + K + + ++ + Sbjct: 137 ADIDKVKTEDDLKKLRVGVQAGSIQEEYVVNTLK----MTTTKSLKAIPDLITELKNGNI 192 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 DA + + D +A AI + D Sbjct: 193 DAVVTNEAVSLINVKKYDGIKMANTEVGKDVTEGMAAAIKKSDNN 237 >gi|317406067|gb|EFV86331.1| extracellular solute-binding protein family 3 [Achromobacter xylosoxidans C54] Length = 286 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 49/229 (21%), Positives = 78/229 (34%), Gaps = 15/229 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + L +K+RG L G++ F + G GF + R +++ + + + Sbjct: 25 ATLDRVKQRGKLVVGVDGASPPFGLLDPATGKVGGFQTELGRDIATRLGVTLETVP---V 81 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 A R LQ+ ++D+L N WT R L A P G ++ K+ GI L Sbjct: 82 TAATRVQFLQAGKVDLLIANIQWTQERSEILSYAPTP-YNLVGGAAMVSKRSGIKRWEDL 140 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G CV G+ L + + A + E A + CDA ALY Sbjct: 141 KGKVACVSQGSNFAKPLQETYGA-----VVKGLRNIPESLLALKGGSCDASVHIQPALYE 195 Query: 204 LKLTNDRPSEHVIL----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 E PD + SP + + + V Sbjct: 196 TLHG-PNGKEWDGFELATPDQLIPSPTVIWTRRNEADTRAFVDGVIRDW 243 >gi|306827617|ref|ZP_07460897.1| amino acid ABC superfamily ATP binding cassette transporter, binding/permease protein [Streptococcus pyogenes ATCC 10782] gi|304430180|gb|EFM33209.1| amino acid ABC superfamily ATP binding cassette transporter, binding/permease protein [Streptococcus pyogenes ATCC 10782] Length = 270 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 78/262 (29%), Gaps = 17/262 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASIL---GDIKKRGFLKCGINTGLVGFAE---VKANGD 55 +K L ++L+ + + L IKK L ++ F V Sbjct: 3 FKKIRFGFLLCLLLYPLAACNKSEQLNHHERIKKTRKLVVAVSPDYAPFEFKALVNGKDT 62 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G DV +A++ + D ++ P++ +LQ+ + D+ T R Sbjct: 63 IVGADVQLAQAIADELDVD---LELSPMSFDNVLSSLQTGKADLAISGISHTKERAKV-- 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F Y +M + +S L+G + Q G+ E + N Sbjct: 118 YDFSIPYYQAENAIVMRASDAKVTKNISDLNGKKVAAQKGSIEEGLVKIQLPKAN----L 173 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + E +A + A T + + + A A+ + Sbjct: 174 ISLTAMGEAINELKAGQVYAVTLETPVAAGFLAQHKDLALAPFSLKTSDGDDKAVALPKN 233 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 + V+ + E Sbjct: 234 SGDLTKAVNKVIAKLDEQERYK 255 >gi|16264424|ref|NP_437216.1| putative amino acid uptake ABC transporter periplasmic solute-binding protein precursor [Sinorhizobium meliloti 1021] gi|15140561|emb|CAC49076.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium meliloti 1021] Length = 280 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 42/264 (15%), Positives = 87/264 (32%), Gaps = 21/264 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKG 58 M K I L + + S NA+ L IK G + V + +G Sbjct: 5 MNKH----IAALTVACLAATSANAAGLPERIKSAGKVVVANQPNYPPMEYVDPATNELRG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D+D AL+ + + +++ + ++ +LQ+ ++D++ R L F Sbjct: 61 VDIDLGVALAKELG---TTVEWSNIGFEQMISSLQTGRVDLIHSGMSDLPKR--RDTLDF 115 Query: 119 RPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN-----MKY 171 G F +K +++ G + + T+ A + A+ Sbjct: 116 ID-YMKSGAQFYTSFARKDEFKTLTDFCGKIVGMSRRTSFPDETAKWSTANCEAKGLPAV 174 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + E + A + R DA L L + ++ + + Sbjct: 175 KVVGTEGSADARAQLKQGRLDAAVQGSETLPYLMDLEKD--TYAVVGEPFTVVYQGIGFA 232 Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255 + DTE + + A++ + E Sbjct: 233 KKDTELRDAYAAALKALMESGEYK 256 >gi|107021924|ref|YP_620251.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116688872|ref|YP_834495.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105892113|gb|ABF75278.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116646961|gb|ABK07602.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 259 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 78/220 (35%), Gaps = 13/220 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ GI F G +GFDVD A+ + + K ++ ALQ+ Sbjct: 26 TLRFGIEAAYPPFESKTPAGQLQGFDVDVGNAVCAKL---NMKCVWVENAFDGLIPALQA 82 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153 ++ D ++ + T R+ + F P Y + + + V+ L G + V G Sbjct: 83 RKFDAINSAMNITAKRK--QSIDFTPPIYVVPIVMVAKRGSPLKPDVASLRGKHVGVLQG 140 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 ++ E L ++ + + ++ ++I A A R DA + L + Sbjct: 141 SSQEDFLKAHWANAGVA--VVSYQDQDQIYADLVAGRLDAAVQEAQTAQDGFLDKPAGRD 198 Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248 + I+ + + + + D + A+ Sbjct: 199 YQIVGEPLKDPATLGEGTGFGLRKNDKALQAKIVGALDAL 238 >gi|260597267|ref|YP_003209838.1| putative ABC transporter arginine-biding protein [Cronobacter turicensis z3032] gi|260216444|emb|CBA29559.1| Arginine-binding periplasmic protein 1 [Cronobacter turicensis z3032] Length = 251 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 45/215 (20%), Positives = 75/215 (34%), Gaps = 16/215 (7%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ F + A GFDVD AL I + + AL+ Sbjct: 30 TIRFATEASYPPFESMDAGNKIVGFDVDLANALCKEI---DATCTFTNQAFDSLIPALKF 86 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K++D + D T R+ + F Y + F+ + K SS+ QL G + VQ GT Sbjct: 87 KRVDAVMAGMDITPERQK--QVLFTTPYYDNSALFVGLQGKN-SSIEQLKGKRVGVQNGT 143 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T + + D + ++ + + R DA GD + + P Sbjct: 144 THQKYITDKHPE----ITTVPYDSYQTARLDLQNGRIDAVFGDTAVVTEWL--KTNPKLA 197 Query: 215 VILPDIISKSP----LAPAIIQGDTEWYNIVSWTH 245 + + K L A+ QG+TE + Sbjct: 198 AVGDKVTDKDYFGTGLGIAVRQGNTELQQKFNTAL 232 >gi|257469868|ref|ZP_05633960.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185] gi|317064097|ref|ZP_07928582.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185] gi|313689773|gb|EFS26608.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185] Length = 241 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 82/246 (33%), Gaps = 24/246 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + ++ ++L ++ + + + G N F + NG+ GFD Sbjct: 1 MKKFFKLLLIGSMVLSVSATA---------LAKDKIYVGTNAEFPPFEYL-ENGEITGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + D I+ + + ALQ K++D++ R ++F Sbjct: 51 MDLVHEIGKLVDAD---IKIVDMGFDGLLPALQMKKVDLVIAGMTANEER--MKTVSFTQ 105 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y Q I+ I S + L G + V G T ++ +++ F Sbjct: 106 PYYTASQVIIVKDGNDSIKSFADLKGKKVGVMLGFTGDMVVSEI-----DGVKIERFNAA 160 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A +A + +A D N V+ + A A+ + D Sbjct: 161 YAGIMALQAGKVEAIVLDSEPAKNYVAQNKG---LVLADADAEQEEYAIAVRKNDKALLE 217 Query: 240 IVSWTH 245 V Sbjct: 218 KVEKAL 223 >gi|225075328|ref|ZP_03718527.1| hypothetical protein NEIFLAOT_00331 [Neisseria flavescens NRL30031/H210] gi|224953503|gb|EEG34712.1| hypothetical protein NEIFLAOT_00331 [Neisseria flavescens NRL30031/H210] Length = 275 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 68/224 (30%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS--------------ILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L ++ ++ I +G + G Sbjct: 2 MLKKFVLGGIAALVLAACGGEGGSASSSASAQSAGASGSLIERINNKGTVTVGTEGTYAP 61 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 62 FTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKETQWDSMMAGLEAGRFDVVANQVGL 118 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + I S+ + G V+ + + KA Sbjct: 119 T-SPERQATFDKSEPYSWSGAVLVARNDSNIKSIDDIKG----VKTAQSLTSNYGERAKA 173 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 174 AG--AELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 215 >gi|78357349|ref|YP_388798.1| extracellular solute-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219754|gb|ABB39103.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 246 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 34/253 (13%), Positives = 80/253 (31%), Gaps = 24/253 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++L +++ + + + + + A+ G+ Sbjct: 1 MLKKICLAMLAVMMTANVALAER-----------TIVFAHDATWPPMEYMSADKKVVGYA 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD+ A++ + F L + + D ++ + T R+ + F Sbjct: 50 VDYMDAVAKEAGFTAEH---RNVAWDGIFAGLANGEYDAIASSVSITEQRKR--AMDFSI 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q +++K S + L G ++ Q GTT + P F+ + Sbjct: 105 PYFEVKQAVVLNKSVEAKSFADLKGKTLGAQIGTTGYFAI-----KKAEGVTPRSFDEIG 159 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND---RPSEHVILPDIISKSPLAPAIIQGDTEW 237 A D D L + + + + + K A+ +G++E Sbjct: 160 LAMEALYNGNIDGVVCDDPVAANYALQQEEYAKRLKIAFIVEAEEKEYYGVAVNKGNSEV 219 Query: 238 YNIVSWTHYAMVT 250 ++ A+ Sbjct: 220 LALIDKGIKAVKE 232 >gi|150398176|ref|YP_001328643.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150029691|gb|ABR61808.1| extracellular solute-binding protein family 3 [Sinorhizobium medicae WSM419] Length = 265 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 77/211 (36%), Gaps = 10/211 (4%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G N G V + +A+G GF+VD ++ + ++++ F A+QS Sbjct: 29 LTVGANIGNVPWEFQEADGKIVGFEVDLVNEIAKRLGK---SVEFVNTPFNGLFPAVQSG 85 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 +ID+ + T R ++F Y Q + G + + + G + V G+T Sbjct: 86 RIDMAISSITITDKR--LESVSFAQPYYDSDQSLTVTATSGTTGLKDMEGKVVGVDTGST 143 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 ++ AD KA FE + A R D Y DI AL + Sbjct: 144 GDMW-ADRNKADYKFGEIRRFEGLSPAMLDLVAGRVDGYISDIPALLYYV---KDKPDLK 199 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 ++ I + + +G V+ Sbjct: 200 VVERIPTGEKYSIMFNKGAP-LAAEVNDVIT 229 >gi|294788187|ref|ZP_06753430.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Simonsiella muelleri ATCC 29453] gi|294483618|gb|EFG31302.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Simonsiella muelleri ATCC 29453] Length = 275 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 70/225 (31%), Gaps = 25/225 (11%) Query: 1 MYKDFFVSILCLIILFF---------TSFST-----NASILGDIKKRGFLKCGINTGLVG 46 M K +++ + L TS S + S++ I ++G + G Sbjct: 1 MLKKITLTVATVFALVACGQHDGATQTSASAMESNVSGSLIDRINQKGTITVGTEGTYAP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F+ A+G G+DV+ RA++ + +++ L++ + DI++ Sbjct: 61 FSYHDASGKLTGYDVEVVRAVAEKLGVK---VEFKETQWDSMMAGLKAGRFDIVANQVAL 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFK 165 T E + G + I +++ + G + Sbjct: 118 T-SPERQKTFDKSEPYSWSGAAMLARTDETRIKNLADIKGIKAAQTLSSNYGEM------ 170 Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 A + + + + + + R D D + N Sbjct: 171 AVKAQAEIVPVDGMAQAITLVQQKRADVTLNDELSFLDYLKKNQN 215 >gi|227487312|ref|ZP_03917628.1| glutamine ABC superfamily ATP binding cassette transporter, glutamate-binding protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227092738|gb|EEI28050.1| glutamine ABC superfamily ATP binding cassette transporter, glutamate-binding protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 288 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 41/289 (14%), Positives = 83/289 (28%), Gaps = 19/289 (6%) Query: 1 MYKDFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F I L + ST L G + G G + G Sbjct: 1 MMRRIFAIISALAVAVTATACGSTEPRSLVRSVDSGHVILGTKYDQPGLGMRNPDKTMTG 60 Query: 59 FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 DV+ ++ +I + + R +++ ++D+++ R Sbjct: 61 LDVEVATYVVNHIADQRGVAHPEITWRETPSATRETVIKNGEVDMIAGTYSINASRAK-- 118 Query: 115 GLAFRPITYFDGQGFIMHKKKG-ISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYH 172 + F Q ++ + S+ L G +C G+T + Sbjct: 119 SVNFGGPYLLTHQALLVRSDDHTLQSLQDLDKGRKLCSVTGSTPAQKVKKSLP----GVQ 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL----PDIISKSPLAP 228 ++ A + DA T D + LY L E + + + Sbjct: 175 LQEYDSYSSCVEALHQKKVDAMTTDATILYGFALQYPGEFEVIEMTKEDGKPFTNEHYGL 234 Query: 229 AIIQGDTEWYNIVSWTHYAMV-TAEELGITQKNINQVSKDTTNPDVQRF 276 + + D E ++ AM + KN+ + + +V Sbjct: 235 GLAKDDAESTEAINDAVRAMQDDGSFQAMVDKNLGENASVVEADEVGNL 283 >gi|269216150|ref|ZP_06160004.1| extracellular solute-binding protein, family 3 [Slackia exigua ATCC 700122] gi|269130409|gb|EEZ61487.1| extracellular solute-binding protein, family 3 [Slackia exigua ATCC 700122] Length = 282 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 71/214 (33%), Gaps = 13/214 (6%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 G + + V +G + GFD++ + + + + P+N + L Sbjct: 48 IVGFDQEYPPYGFVGDDGQYTGFDLELAKEVCARNGWNFKA---QPVNWDAKDAELNGGA 104 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGT 154 + L RE F +GQ ++ K ++ L+G ++ Q + Sbjct: 105 VTCLWNGFTK-EGREK--NYTFSEPYMLNGQVVVVKADKASEYGTLDALAGKTVVTQVDS 161 Query: 155 TTELTL---ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 + L A ++ CDA D+S A + P Sbjct: 162 SALEVLQGAKADLNASFAGGAVNQVSDYNAAFMDLQSGACDAVACDLSI--AEYQMSANP 219 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + +L D +S A +G+TE + V+ T Sbjct: 220 GAYAVLKDTLSDEHYAVGFAKGNTELADAVTETL 253 >gi|34498438|ref|NP_902653.1| amino acid ABC transporter periplasmic protein [Chromobacterium violaceum ATCC 12472] gi|34104292|gb|AAQ60651.1| probable amino acid ABC transporter, periplasmic-binding protein [Chromobacterium violaceum ATCC 12472] Length = 254 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 73/229 (31%), Gaps = 14/229 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L DI+K G LK G F A G GFDV+ +A+++ + P Q++ Sbjct: 22 DDLADIRKAGVLKIGTEGTYAPFTYHDAAGSLTGFDVEIAQAIAARLGVKP---QFVEGK 78 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQL 143 L K+ D++ T R++ F I+ I L Sbjct: 79 WDGLIAGLDVKRYDVVINEVAITDARKV--KYDFSAPYIVSKAVLIVRDDNRDIKRFEDL 136 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G T+ LA + A + + E A + R + D + Sbjct: 137 KGRKSA-NTLTSNFGKLAQRYGA-----EIVPTQGFNESVALLESGRVETTINDSLSFLD 190 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 K + V + + + +G+ E + A + A+ Sbjct: 191 FKKKQPKSRLKVAATEANGDAS-GVLLRKGNPELKAAIDKAL-AGIKAD 237 >gi|256026532|ref|ZP_05440366.1| amino acid-binding protein [Fusobacterium sp. D11] gi|289764543|ref|ZP_06523921.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Fusobacterium sp. D11] gi|289716098|gb|EFD80110.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Fusobacterium sp. D11] Length = 250 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 84/256 (32%), Gaps = 28/256 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L L L F + L G N + + N GFD Sbjct: 1 MKKIITILMLILSALSFAA--------------KKLYVGTNAEFKPYEYL-ENNKMVGFD 45 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ L + + I++ ++ ALQ K+ID + T RE ++ + Sbjct: 46 IELMELLGKKLGYE---IKWQDMSFDGLLPALQMKKIDAVIAGMSATPEREKAVSFSIPY 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + G I++ K L G +I VQ G+ E D P ++ Sbjct: 103 VFFEGGHDVIVNNKSSFKKKEDLKGKTIGVQLGSIQEQFAKD------NGSIPKLYNNFT 156 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA-PAIIQGDTEWYN 239 E + + DA + T + I K P A A + D++ Sbjct: 157 EALLDLQNQKIDAVIIAEVSGKEYLKTMKG---IKKIDTIKDKLPNASIAFRKADSKLAK 213 Query: 240 IVSWTHYAMVTAEELG 255 S + ++ E Sbjct: 214 EFSNAILELKSSPEYA 229 >gi|209517853|ref|ZP_03266687.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. H160] gi|209501686|gb|EEA01708.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. H160] Length = 257 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 75/225 (33%), Gaps = 13/225 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K ++ G++ F +G GFD+D + + +K ++ + Sbjct: 20 KDWSTVRFGVDASYAPFESKATDGKLVGFDIDLGNEICKRVG---AKCVWVEQDFDSMIP 76 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASIC 149 AL++K+ D + + T R + F + + K GI + L G ++ Sbjct: 77 ALKAKKFDGVLSSMSMTPQRAEQIA--FSSKLFNTPTRLVAKKGSGILPSADSLKGKTVG 134 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ GT E Y++ + ++ + + + R DA D L Sbjct: 135 VEQGTIQETYAKTYWEPKG--VKVVPYQNQDLVYTDLLSGRLDAALQDAVQADQGFLKTP 192 Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMV 249 R + + I + + + D + V M+ Sbjct: 193 RGTGFAFVGKDIDDPKILGNGAGIGMRKEDADLKTKVDKAIADMI 237 >gi|317153462|ref|YP_004121510.1| family 3 extracellular solute-binding protein [Desulfovibrio aespoeensis Aspo-2] gi|316943713|gb|ADU62764.1| extracellular solute-binding protein family 3 [Desulfovibrio aespoeensis Aspo-2] Length = 280 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 82/232 (35%), Gaps = 15/232 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + S + I KRG ++ G +T +A +G++ GF+++ + L+ + + Sbjct: 31 ATSKTQDQTSQIESILKRGAIRVGFDT-FKPWAMKDKDGNYIGFEIEVAQRLAKDMGVE- 88 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 I+++P AL + + DI+ T R +L + F F G + Sbjct: 89 --IEFVPTKWSGIIPALLTDKFDIIIGGMSVTPAR--NLKVNFSIPYEFSGMSIVASSAL 144 Query: 136 ----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 +I V+ GTT ++ N + F+ + R Sbjct: 145 AGGRTTLDQFNTPDTTISVRLGTTAAEAAKNFLPKAN----ILFFDEESQTIQELLNERV 200 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A L ++ L S P+A A+ +GD ++ N + Sbjct: 201 HALVASSPLPGNLAAEYADKL-YLPLSGDFSSEPIAFAVRKGDQDFLNWLDN 251 >gi|212716937|ref|ZP_03325065.1| hypothetical protein BIFCAT_01881 [Bifidobacterium catenulatum DSM 16992] gi|212660222|gb|EEB20797.1| hypothetical protein BIFCAT_01881 [Bifidobacterium catenulatum DSM 16992] Length = 517 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 81/260 (31%), Gaps = 14/260 (5%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 V++ L+ ++ + +K + G +T F NG G D++ Sbjct: 25 TLIVTVSALVASPVSANAAEVGDPSAVKGK-TYAVGTDTTFAPFEYR-ENGKMTGIDMEL 82 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 RA++ + K+ L AL S Q+D++ T R+ + F + Sbjct: 83 IRAIAQE---EGFKVTIQSLGFNAALQALSSNQVDVVIAGMSITDERKAT--YDFSNPYF 137 Query: 124 FDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G I I+S L G ++ + G+ E + + ++ + Sbjct: 138 QSGIQMAIAENNDSITSYKDLDGKTVVAKTGSEGESYAKQHASEYGY--TVTSVDQSSTM 195 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT-EWYNIV 241 ++ DA D L ++ P + A+ +G + + Sbjct: 196 YEMVKSGNADAVFDDYPVLAYGVSQ--NNGLKIVTPKVPHGE-YGMAVNKGKNADLLAAI 252 Query: 242 SWTHYAMVTAEELGITQKNI 261 ++ + E Sbjct: 253 DDGLNKLIASGEYETIVAQY 272 >gi|284052353|ref|ZP_06382563.1| solute-binding family protein 3 [Arthrospira platensis str. Paraca] Length = 282 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 87/253 (34%), Gaps = 22/253 (8%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI--- 71 + FT + ++L I + G L+ G+ T V F+ + NGD +G+ VD R + + Sbjct: 16 VGFTGVAGAETVLEQIGRTGVLRAGVRTDAVPFSYLNDNGDIEGYSVDLIRLIHGRLEEK 75 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 + P +++ + ++RF +Q +D++ T T RE G+ F + G ++ Sbjct: 76 LNQPIRLEMTTVTLQDRFDQVQQGNLDLVCEATSITAERE--NGVDFSTPFFVTGIQMLV 133 Query: 132 HKKKGIS-----------SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + S L +I TTT+ L + + Sbjct: 134 KTENSDRLDPTQLSETDISTVSLERVTIGFLESTTTDSELRPVYPEAQWE----AVPSRA 189 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL--PDIISKSPLAPAIIQGDTEWY 238 E + D L + E+ L ++ + EW Sbjct: 190 EGIRLLQEGELQGIVSDGILLLGQLWKDGGTRENFQLVPSQPLTFENYGCILPMNSREWS 249 Query: 239 NIVSWTHYAMVTA 251 +V+ T + Sbjct: 250 RVVNSTIASPENT 262 >gi|76819583|ref|YP_336963.1| lysine-arginine-ornithine transport system, binding exported protein [Burkholderia pseudomallei 1710b] gi|251767014|ref|ZP_02265673.2| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia mallei PRL-20] gi|254189431|ref|ZP_04895941.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei Pasteur 52237] gi|254195435|ref|ZP_04901863.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei S13] gi|254200953|ref|ZP_04907318.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia mallei FMH] gi|254204916|ref|ZP_04911269.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia mallei JHU] gi|254299489|ref|ZP_04966938.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 406e] gi|76584056|gb|ABA53530.1| lysine-arginine-ornithine transport system, binding exported protein [Burkholderia pseudomallei 1710b] gi|147748565|gb|EDK55640.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia mallei FMH] gi|147754502|gb|EDK61566.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia mallei JHU] gi|157809307|gb|EDO86477.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 406e] gi|157937109|gb|EDO92779.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei Pasteur 52237] gi|169652182|gb|EDS84875.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei S13] gi|243064154|gb|EES46340.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia mallei PRL-20] Length = 262 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 77/223 (34%), Gaps = 13/223 (5%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 K ++ G++ F +G GFDVD + + +K ++ + Sbjct: 23 QAKDWSTIRFGVDASYPPFESKGPDGKVVGFDVDLGNEICKRV---KAKCVWIENDFDGM 79 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGAS 147 AL++++ D + + T RE + F + + K + + L G + Sbjct: 80 IPALKARKFDGVLSSMSMTPQREEQIA--FSSKLFNTPTRLVTKKGANLMPTAESLKGKT 137 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + V+ GT E ++ +K P ++ +++ A A R DA D L Sbjct: 138 VGVEQGTIQETYAKVHWAPMGVKVQP--YQNQDQVYADLIAGRLDAALQDAVQADIGFLK 195 Query: 208 NDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 R ++ ++ + + DT+ + Sbjct: 196 TPRGKDYAFAGTDLNDPKTLGEGAGIGLRKEDTDLKAKIDKAI 238 >gi|108803350|ref|YP_643287.1| extracellular solute-binding protein [Rubrobacter xylanophilus DSM 9941] gi|108764593|gb|ABG03475.1| extracellular solute-binding protein, family 3 [Rubrobacter xylanophilus DSM 9941] Length = 281 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 79/281 (28%), Gaps = 62/281 (22%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + + F NG+ GFD+D R + P + + L S Sbjct: 56 TITVASDIAYRPFEFY-RNGEPVGFDIDLMREIGRRAGFTPE---FQNVTFDGIIPGLGS 111 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 D T R + F + Q ++ I SV L A++ VQ GT Sbjct: 112 NLYDAAISAITITEER--RQQVDFSEPYFNADQSLLVRSDSDIRSVDDLGQATVGVQIGT 169 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T A+ F+ F+ +E+ A + DA D+ T+D Sbjct: 170 TG-ANKANQFQQQGRIAEVRTFDTIEDAFTALENGQVDAVINDLPVSQDKANTSD--GRL 226 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274 ++ I + A +G V Sbjct: 227 EVVQVIPTGEQYGIAFPKG---------------------------------SNLVGPVN 253 Query: 275 RFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315 R L R I+ G Y E++++ +G Sbjct: 254 RAL--------------------REIKRDGTYAEIYEKWIG 274 >gi|57867284|ref|YP_188964.1| amino acid ABC transporter, permease/amino acid-binding protein, putative [Staphylococcus epidermidis RP62A] gi|251811199|ref|ZP_04825672.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis BCM-HMP0060] gi|282875757|ref|ZP_06284624.1| ABC transporter, permease protein [Staphylococcus epidermidis SK135] gi|57637942|gb|AAW54730.1| amino acid ABC transporter, permease/amino acid-binding protein, putative [Staphylococcus epidermidis RP62A] gi|251805280|gb|EES57937.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis BCM-HMP0060] gi|281294782|gb|EFA87309.1| ABC transporter, permease protein [Staphylococcus epidermidis SK135] gi|329734283|gb|EGG70598.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU045] gi|329737224|gb|EGG73478.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU028] Length = 485 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 76/251 (30%), Gaps = 16/251 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M + + + S N IK RG L+ G++ + ++ Sbjct: 7 MLSIIIIMLSTFTLFISPSTYANEDENWTKIKNRGELRVGLSADYAPLEFEKTIHGKTEY 66 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ + ++ + K++ + + AL++ +IDI+ T R+ + Sbjct: 67 AGVDIELAKKIAKD---NHLKLKIVNMQFDSLLGALKTGKIDIIISGMTTTPERKK--EV 121 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F ++ K ++ G I Q GT E + Sbjct: 122 DFTKPYMITNNVMMIKKDDAKRYQNIKDFEGKKIAAQKGTDQEKIAQTEIE----DSKIS 177 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 R+ E + ++ + + A N + K A+ + Sbjct: 178 SLNRLPEAILSLKSGKVAGVVVEKPVGEAYLKQNSE-LTFSKIKFNEEKKQTCIAVPKNS 236 Query: 235 TEWYNIVSWTH 245 + ++ T Sbjct: 237 PVLLDKLNQTI 247 >gi|18313715|ref|NP_560382.1| solute-binding family 3 protein [Pyrobaculum aerophilum str. IM2] gi|18161269|gb|AAL64564.1| bacterial extracellular solute-binding proteins, family 3 [Pyrobaculum aerophilum str. IM2] Length = 267 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 45/230 (19%), Positives = 75/230 (32%), Gaps = 12/230 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L IKKRG L G + + V G G D+D + ++ ++ +++ + Sbjct: 37 SLDAIKKRGVLVLGTSADWPPYEYV-EGGAVVGIDIDIAKKIAQSLG---VRLEVRDMKF 92 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 A++ +DI+ + T RE + F D I + I +V L G Sbjct: 93 SALIEAVRRGDVDIVLADMAITPDREK--QVLFSIPYQVDSSVVIAKRGARIQNVEDLKG 150 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 ++ VQ GT E N + + A R DA AL Sbjct: 151 KAVGVQVGTVQEDWAVKNLG--NFSKIIRYDKVYPYMVEALRKGDLDAIIVGGVVGKALV 208 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + S A A+ + V Y M+ E+ Sbjct: 209 KRFPEFEIVMSIGVRYS----AAAMPLCAQDLKIQVDRVIYDMLQTGEME 254 >gi|229823498|ref|ZP_04449567.1| hypothetical protein GCWU000282_00796 [Catonella morbi ATCC 51271] gi|229786942|gb|EEP23056.1| hypothetical protein GCWU000282_00796 [Catonella morbi ATCC 51271] Length = 470 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 75/236 (31%), Gaps = 19/236 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + ++ + L S +K +T F ++G++ G D Sbjct: 4 MIKRLMLVLVVFLGLQVPS----------VKAAEHYVIATDTTFAPFEFQDSSGNYVGID 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ A + + PL AL+S Q+D T R+ F Sbjct: 54 MDLLAAIAEA---EGFTYEIKPLGFAAAVQALESDQVDGAIAGMTITDARKA--SFDFSD 108 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G F + I+ + L G I V+ GT + + + F+ Sbjct: 109 NYYESGLQFAVAADSKITDLEGLRGKKIAVKTGTAGADLANKL--KDDYNFTVVTFKDSA 166 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + DA D + + ++ + + S A+ +G Sbjct: 167 NMYEDVLTGNSDATIEDAPVIA--YAIKNGNLRLKLIGEKLETSQTGFAVKKGKNA 220 >gi|73537534|ref|YP_297901.1| glutamine ABC transporter periplasmic protein [Ralstonia eutropha JMP134] gi|72120871|gb|AAZ63057.1| extracellular solute-binding protein, family 3 [Ralstonia eutropha JMP134] Length = 248 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 80/235 (34%), Gaps = 20/235 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + + +A L ++T V F + + + GFD Sbjct: 1 MKLFAKFASAVCLAASLVAHAAHAE---------QLLVAVDTAFVPFEFKQGD-KYVGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + D + P++ ALQ++ +D+ + + F Sbjct: 51 IDLWDAIARDLKLDY---KLQPMDFNGILPALQTRNVDVALAGITI--KEDRKKVIDFSD 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G ++ I ++L G S+ ++ GT+ ADY K++ +F ++ Sbjct: 106 GYYDSGFMLMVPSSSTIKGPNELKGKSLALKTGTSA----ADYAKSNFAGTDLRLFPNID 161 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 R R DA D + T + + P + +G Sbjct: 162 NAYLELRTGRVDAAMHDTPNVLYYIHTAGKGQVKAVGPQ-MMAQKYGIGFPKGSP 215 >gi|298369021|ref|ZP_06980339.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria sp. oral taxon 014 str. F0314] gi|298283024|gb|EFI24511.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria sp. oral taxon 014 str. F0314] Length = 274 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 65/224 (29%), Gaps = 24/224 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS--------------ILGDIKKRGFLKCGINTGLVG 46 M K F + + ++L ++ ++ I +G + G Sbjct: 1 MLKKFVLGGMTALVLAACGGEGGSASSSAPAQSASASGSLIERINNKGTITVGTEGTYAP 60 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 F +G G+DV+ RA++ + +++ L++ + D+++ Sbjct: 61 FTYHDKDGKLTGYDVEVTRAVADKLGVK---VEFKETQWDSMMAGLKAGRFDVVANQVGL 117 Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166 T E + G + I S+ + G + KA Sbjct: 118 T-SPERQATFDKSEPYSWSGAVLVARNDSNIKSIDDIKGVKTAQSLTSNYGE------KA 170 Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + R DA D A+ N Sbjct: 171 KAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPN 214 >gi|326439678|ref|ZP_08214412.1| ABC transporter substrate-binding protein [Streptomyces clavuligerus ATCC 27064] Length = 283 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 80/246 (32%), Gaps = 17/246 (6%) Query: 7 VSILCLIILFFTSFS---TNASILGDI--KKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 ++ +L T+ A+ + +G L + F + +G+ GFDV Sbjct: 19 LAAAVTGVLITTACGTGDQGATTADGVPLVAKGKLTTCTHLPYPPFQF-ERDGEVVGFDV 77 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 ++ + I P + L S + D+ + T R+ + F Sbjct: 78 ALIDRVAKDLGVRQE-ILDTPFENFKTGAFLNSGECDLAAAGMTITEERKK--NVDFSVP 134 Query: 122 TYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Q + GI S++++ + Q+GTT E + + + P+ FE Sbjct: 135 YFDATQALLATAGSGIRSLAEVEAEKRKLGAQSGTTGESHVQEQ------GFDPVAFESS 188 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R + DA D + + I + ++ +G+ Sbjct: 189 DAVLNGLRTGQVDAVVIDYPVVQGWLKDPANARAFRLGQSIETGEQYGFSVKKGNDALRA 248 Query: 240 IVSWTH 245 + Sbjct: 249 AIDKVI 254 >gi|313894100|ref|ZP_07827666.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Veillonella sp. oral taxon 158 str. F0412] gi|313441664|gb|EFR60090.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Veillonella sp. oral taxon 158 str. F0412] Length = 260 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 90/252 (35%), Gaps = 17/252 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K ++++ + + + N ++ G L+ G T F + + GFDV Sbjct: 5 KKLTAIALVAVAAMGLLAGCGNEK-PKMTQQEGVLRVGSETTFPPFEFTEGE-KYVGFDV 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A+S I K+++ + A+QS ID+++ + T RE L F + Sbjct: 63 DLSEAISKKIG---LKMEFKSMGFDALIPAVQSGDIDMIAAGINATPEREKV--LDFSDV 117 Query: 122 TYFD--GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + I ++ +L+G ++ Q GT + Sbjct: 118 YFDQGGFITVVRKDNTTIHNMDELAGKTVGAQIGTIPVEMAQKI-----PGTTVKQIDSN 172 Query: 180 EEIDAAYRAHRCD-AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I +A D A + A+Y LK D+ + V P + L + +G+ Sbjct: 173 ANIFMELKAGTIDGAILDNAVAMYYLKQGADQDLKLVGEPTKSPGTVLG--VKKGNKALQ 230 Query: 239 NIVSWTHYAMVT 250 + V+ + Sbjct: 231 DAVNKALKELKE 242 >gi|328470612|gb|EGF41523.1| amino acid ABC transporter amino acid-binding protein [Vibrio parahaemolyticus 10329] Length = 272 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 83/251 (33%), Gaps = 19/251 (7%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K ++L L I T + + IK+RG L+ G++T V +A G+ Sbjct: 1 MKLFKATITALLGLAIAMPTIAKEDVPTPNVDQIKERGTLRVGMST-FVPWAMRNKQGEL 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GF++D + L+ K++++P AL +K+ D++ T R S + Sbjct: 60 IGFEIDVAKRLAQDSG---LKVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSV 114 Query: 117 AFRPITYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F G +K+ S I + G T + F Sbjct: 115 LFTEPYSHSGVQVAANKELASGFSEFSDFDSRRVKIAARRGAFTVQVARETFPKAK---- 170 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + F+ + A + + + + +SK A A+ Sbjct: 171 ILQFDDDAQAFQEVLNGNAHAVIASSPKPEHETVKHSDKL-FLPFSERLSKGNEAFAVRL 229 Query: 233 GDTEWYNIVSW 243 G+ + + Sbjct: 230 GEEDKKAFFNK 240 >gi|260494601|ref|ZP_05814731.1| amino acid-binding protein [Fusobacterium sp. 3_1_33] gi|260197763|gb|EEW95280.1| amino acid-binding protein [Fusobacterium sp. 3_1_33] Length = 250 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 84/256 (32%), Gaps = 28/256 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L L L F + L G N + + N GFD Sbjct: 1 MKKIITILMLILSALSFAA--------------KKLYVGTNAEFKPYEYL-ENNKMVGFD 45 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ L + + I++ ++ ALQ K+ID + T RE ++ + Sbjct: 46 IELMELLGKKLGYE---IKWQDMSFDGLLPALQMKKIDAVIAGMSATPEREKAVSFSIPY 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + G I++ K L G ++ VQ G+ E D P ++ Sbjct: 103 VFFEGGHDVIVNNKSSFKKKEDLKGKTVGVQLGSIQEQFAKD------NGSIPKLYNNFT 156 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA-PAIIQGDTEWYN 239 E + + DA + T + I K P A A + D++ Sbjct: 157 EALLDLQNQKIDAVIIAEVSGKEYLKTMKG---IKKIDTIKDKLPNASIAFRKADSKLAK 213 Query: 240 IVSWTHYAMVTAEELG 255 S + ++ E Sbjct: 214 EFSNAILELKSSPEYA 229 >gi|50914391|ref|YP_060363.1| glutamine transport system permease protein [Streptococcus pyogenes MGAS10394] gi|50903465|gb|AAT87180.1| Glutamine-binding protein [Streptococcus pyogenes MGAS10394] Length = 724 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 97/293 (33%), Gaps = 38/293 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V +L ++ +F T +A + + +T F ++ +KG D Sbjct: 1 MTHKIKVLLLAIMSIFLTCNIASAETIAIV---------SDTAYAPFEFKDSDQIYKGID 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ D + + +A A+QS Q L T T R+ F Sbjct: 52 VDIINEVAKRQSWD-FSMSFPGFDAAVN--AVQSGQASALMAGTTITNARKKV--FHFSE 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K I S L G ++ V+ GT + L +Y Y F+ + Sbjct: 107 PYYDTKIVIATRKANTIKKYSDLKGKTVGVKNGTAAQAFLNNY--KKKYDYTVKTFDTGD 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP--AIIQGDTEWY 238 + + A A D + + N + + P+ ++ + + Sbjct: 165 LMYNSLSAGSIAAVMDDEAVIQYAISQNQD------IAINMKGEPIGSFGFAVKKGSGYD 218 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290 +V+ + A + + D T + ++LG D + +A G Sbjct: 219 YLVNDFNTA-------------LKAMKADGTYQAIMTKWLGTDDKATTSQATG 258 Score = 94.8 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 79/256 (30%), Gaps = 16/256 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + S A+ IK + ++ F G + G D Sbjct: 241 MTKWLGTDDKATTSQATGNPSAKAT---PIKDSYKIV--SDSSFAPFEFQNGKGKYVGID 295 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ +A++ KI+ A+QS Q D + T R+ F Sbjct: 296 IELIKAIAKQ---QGFKIEIANPGFDAALNAVQSSQADGVIAGATITDARKAI--FDFSD 350 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + K I + L ++ + GT++ L + + + F+ Sbjct: 351 PYYTSNIILAVKAGKNIKNYEDLDRKTVGAKNGTSSYSWLKENAPKYGY--NVKAFDDGS 408 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYN 239 + + + DA D LK + + IS + A+ + + E Sbjct: 409 SMYDSLNSGSVDAIMDDE---AVLKYAISQGRRFETPLEGISTGEVGFAVKKGTNPELIE 465 Query: 240 IVSWTHYAMVTAEELG 255 + + A+ + + Sbjct: 466 MFNNGLAALKKSGQYD 481 >gi|15674823|ref|NP_268997.1| putative ABC transporter substrate-binding protein [Streptococcus pyogenes M1 GAS] gi|71910409|ref|YP_281959.1| arginine-binding protein [Streptococcus pyogenes MGAS5005] gi|13621955|gb|AAK33718.1| putative ABC transporter (substrate-binding protein) [Streptococcus pyogenes M1 GAS] gi|71853191|gb|AAZ51214.1| arginine-binding protein [Streptococcus pyogenes MGAS5005] Length = 270 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 78/262 (29%), Gaps = 17/262 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASIL---GDIKKRGFLKCGINTGLVGFAE---VKANGD 55 +K L ++L+ + + L IKK L ++ F V Sbjct: 3 FKKIRFGFLLCLLLYPLAACNKSEQLNHYERIKKTRKLVVAVSPDYAPFEFKALVNGKDT 62 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G DV +A++ + D ++ P++ +LQ+ + D+ T R Sbjct: 63 IVGADVQLAQAIADELDVD---LELSPMSFDNVLSSLQTGKADLAISGISHTKERAKV-- 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F Y +M + +S L+G + Q G+ E + N Sbjct: 118 YDFSIPYYQAENAIVMRASDAKVTKNISDLNGKKVAAQKGSIEEGLVKIQLPKAN----L 173 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + E +A + A T + + + A A+ + Sbjct: 174 ISLTAMGEAINELKAGQVYAVTLEAPVAAGFLAQHKDLALAPFSLKTSDGDAKAVALPKN 233 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 + V+ + E Sbjct: 234 SGDLTKAVNKVIAKLDEQERYK 255 >gi|323144229|ref|ZP_08078861.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Succinatimonas hippei YIT 12066] gi|322416004|gb|EFY06706.1| putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH [Succinatimonas hippei YIT 12066] Length = 256 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 76/236 (32%), Gaps = 16/236 (6%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRAL 67 ILC I T S A I ++ G F + + GFD++ +A+ Sbjct: 13 ILCGIAALCTVLSVQAE--DKI-----MRVGAEPAYAPFEFIDEETKELTGFDIELIKAI 65 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + +I+ + AL + +D++ T R+ + + Sbjct: 66 AE---VEGYEIEISTMPFDALIPALLTNNVDVILSAITITEERKKRVAFSVPYYDSGLTI 122 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 K + SV L G ICVQ GTT + K F E + Sbjct: 123 LINEKDKDKVKSVKDLEGQKICVQIGTTGANYASTQIK----DAVVSQFNTAPESYLELK 178 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A C A D TN + LP +S A+ + D + V+ Sbjct: 179 AGGCVAAINDRPVNDYYLATNK-SEGIISLPGTLSSESYGIAMRKTDEDMVKAVND 233 >gi|239637861|ref|ZP_04678822.1| glutamine-binding periplasmic protein [Staphylococcus warneri L37603] gi|239596424|gb|EEQ78960.1| glutamine-binding periplasmic protein [Staphylococcus warneri L37603] Length = 486 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 82/259 (31%), Gaps = 23/259 (8%) Query: 1 MY---KDFFVSILCLIILFFT----SFSTNASI-LGDIKKRGFLKCGINTGLVGFAE-VK 51 M K F V ++ + T + IK G L+ G++ Sbjct: 1 MKYFIKVFLVFLIIVGSTLTTKQPNINAEEKDTNWQKIKDSGELRVGLSADYAPMEFEKN 60 Query: 52 ANGD--WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 ANG + G D++ + ++ + K++ + + AL++ +IDI+ T Sbjct: 61 ANGKTEYAGVDIELAKKIAKD---NHLKLKIINMQFDSLLGALKTGKIDIIISGMTTTPE 117 Query: 110 REISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 RE ++F ++ K + S+S I VQ GT E + Sbjct: 118 REK--EVSFTKPYMMTNNIMLVKKNEKNHLKSISDFKDKKIAVQKGTDQEKIAKTEIE-- 173 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 ++ E + ++ + + A N + K P Sbjct: 174 --NADVTSLNKLPETILSVKSGKAVGAILEKPVAEAYIKQNPE-LAFSDVKFNEEKKPTC 230 Query: 228 PAIIQGDTEWYNIVSWTHY 246 A+ + ++ T Sbjct: 231 IAVPKNSPILLKKLNQTSN 249 >gi|221214276|ref|ZP_03587248.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD1] gi|221165931|gb|EED98405.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD1] Length = 262 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 78/253 (30%), Gaps = 24/253 (9%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M ++I L + +A L+ G+ F NG+ +G Sbjct: 1 MKPTHSLKLAIALACALGSAAAVADAQT---------LRFGLEAQYPPFESKAPNGELQG 51 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D A+ +++ + AL+ ++ D ++ + T R + F Sbjct: 52 FDIDVGNAVCQ---TAKLTCKWVETSFDGLIPALKGRKFDAINSAMNATEQR--RQAIDF 106 Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 I Y I G + + L G + V + E +++ + + ++ Sbjct: 107 TTIIYRVPTQLIARTGSGLLPTPESLKGKRVGVLQASIQETYAKAHWEPAGVA--IVAYQ 164 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQ 232 + A A R DA A L+ + + +A + + Sbjct: 165 DQNQAYADLVAGRLDATLVLAPAGQRGFLSRPDGKGFSFVGQPVRDDRILGSGIAFGLRK 224 Query: 233 GDTEWYNIVSWTH 245 GD + Sbjct: 225 GDDALKAKLDAAI 237 >gi|94994077|ref|YP_602175.1| Arginine-binding protein [Streptococcus pyogenes MGAS10750] gi|139474036|ref|YP_001128752.1| extracellular solute-binding protein [Streptococcus pyogenes str. Manfredo] gi|94547585|gb|ABF37631.1| Arginine-binding protein [Streptococcus pyogenes MGAS10750] gi|134272283|emb|CAM30536.1| extracellular solute-binding protein [Streptococcus pyogenes str. Manfredo] Length = 270 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 78/262 (29%), Gaps = 17/262 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASIL---GDIKKRGFLKCGINTGLVGFAE---VKANGD 55 +K L ++L+ + + L IKK L ++ F V Sbjct: 3 FKKIRFGFLLCLLLYPLAACNKSEQLNHYERIKKTRKLVVAVSPDYAPFEFKALVNGKDT 62 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G DV +A++ + D ++ P++ +LQ+ + D+ T R Sbjct: 63 IVGADVQLAQAIADELDVD---LELSPMSFDNVLSSLQTGKADLAISGISHTKERAKV-- 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F Y +M + +S LSG + Q G+ E + N Sbjct: 118 YDFSIPYYQAENAIVMRASDAKVTKNISDLSGKKVAAQKGSIEEGLVKIQLPKAN----L 173 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + E +A + A T + + + A A+ + Sbjct: 174 ISLTAMGEAINELKAGQVYAVTLETPVAAGFLAQHKDLALAPFSLKTSDGDAKAVALPKN 233 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 + V+ + E Sbjct: 234 SGDLTKAVNKVIAKLDEQERYK 255 >gi|148653871|ref|YP_001280964.1| extracellular solute-binding protein [Psychrobacter sp. PRwf-1] gi|148572955|gb|ABQ95014.1| extracellular solute-binding protein, family 3 [Psychrobacter sp. PRwf-1] Length = 277 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 73/219 (33%), Gaps = 13/219 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 ++ L+ F A G+ +GFDVD AL + + + + Sbjct: 53 EQKVLRIATEGAYAPFNYTDAEGNLQGFDVDIANALCEQM---KVSCEIQAQDWEGIIPG 109 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS--QLSGASIC 149 L++K+ D + T R S + F + + FI K ++ + I Sbjct: 110 LKAKKYDAIVAAMSVTPER--SQQVDFTDPYFTNALVFITSKDSTFDPSHSDNITSSKIA 167 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 Q T + L + NM+ +++ + ++R DA D L+ + Sbjct: 168 AQRSTISSQWLESTYPKANMQ----LYDTLNNAFLDLESNRVDAMISDK-LPAIEWLSKN 222 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 V DI A A+ + ++ A+ Sbjct: 223 NSQFEVKGADIEIDDNFAIAVRK-QDALKEQLNEALAAI 260 >gi|53717301|ref|YP_106091.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei ATCC 23344] gi|53721304|ref|YP_110289.1| lysine-arginine-ornithine transport system, binding exported protein [Burkholderia pseudomallei K96243] gi|124382176|ref|YP_001025903.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei NCTC 10229] gi|126445539|ref|YP_001061480.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 668] gi|126447410|ref|YP_001077991.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei NCTC 10247] gi|126458568|ref|YP_001074419.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 1106a] gi|134280651|ref|ZP_01767361.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Burkholderia pseudomallei 305] gi|167722270|ref|ZP_02405506.1| lysine-arginine-ornithine transport system, binding exported protein [Burkholderia pseudomallei DM98] gi|167741269|ref|ZP_02414043.1| lysine-arginine-ornithine transport system, binding exported protein [Burkholderia pseudomallei 14] gi|167818443|ref|ZP_02450123.1| lysine-arginine-ornithine transport system, binding exported protein [Burkholderia pseudomallei 91] gi|167848345|ref|ZP_02473853.1| lysine-arginine-ornithine transport system, binding exported protein [Burkholderia pseudomallei B7210] gi|167896896|ref|ZP_02484298.1| lysine-arginine-ornithine transport system, binding exported protein [Burkholderia pseudomallei 7894] gi|167905279|ref|ZP_02492484.1| lysine-arginine-ornithine transport system, binding exported protein [Burkholderia pseudomallei NCTC 13177] gi|167913583|ref|ZP_02500674.1| lysine-arginine-ornithine transport system, binding exported protein [Burkholderia pseudomallei 112] gi|217423019|ref|ZP_03454521.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 576] gi|226194751|ref|ZP_03790343.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei Pakistan 9] gi|237507303|ref|ZP_04520018.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei MSHR346] gi|238562560|ref|ZP_00440185.2| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia mallei GB8 horse 4] gi|242311579|ref|ZP_04810596.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 1106b] gi|254262968|ref|ZP_04953833.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 1710a] gi|254359037|ref|ZP_04975309.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia mallei 2002721280] gi|52211718|emb|CAH37716.1| lysine-arginine-ornithine transport system, binding exported protein [Burkholderia pseudomallei K96243] gi|52423271|gb|AAU46841.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei ATCC 23344] gi|126225030|gb|ABN88535.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 668] gi|126232336|gb|ABN95749.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 1106a] gi|126240264|gb|ABO03376.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei NCTC 10247] gi|134247673|gb|EBA47757.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Burkholderia pseudomallei 305] gi|148028224|gb|EDK86184.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia mallei 2002721280] gi|217393927|gb|EEC33947.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 576] gi|225933095|gb|EEH29090.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei Pakistan 9] gi|234999508|gb|EEP48932.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei MSHR346] gi|238522334|gb|EEP85779.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia mallei GB8 horse 4] gi|242134818|gb|EES21221.1| putative lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 1106b] gi|254213970|gb|EET03355.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia pseudomallei 1710a] gi|261826687|gb|ABN00457.2| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia mallei NCTC 10229] Length = 260 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 77/223 (34%), Gaps = 13/223 (5%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 K ++ G++ F +G GFDVD + + +K ++ + Sbjct: 21 QAKDWSTIRFGVDASYPPFESKGPDGKVVGFDVDLGNEICKRV---KAKCVWIENDFDGM 77 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGAS 147 AL++++ D + + T RE + F + + K + + L G + Sbjct: 78 IPALKARKFDGVLSSMSMTPQREEQIA--FSSKLFNTPTRLVTKKGANLMPTAESLKGKT 135 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 + V+ GT E ++ +K P ++ +++ A A R DA D L Sbjct: 136 VGVEQGTIQETYAKVHWAPMGVKVQP--YQNQDQVYADLIAGRLDAALQDAVQADIGFLK 193 Query: 208 NDRPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTH 245 R ++ ++ + + DT+ + Sbjct: 194 TPRGKDYAFAGTDLNDPKTLGEGAGIGLRKEDTDLKAKIDKAI 236 >gi|257887162|ref|ZP_05666815.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] gi|257898269|ref|ZP_05677922.1| amino acid ABC transporter [Enterococcus faecium Com15] gi|257823216|gb|EEV50148.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] gi|257836181|gb|EEV61255.1| amino acid ABC transporter [Enterococcus faecium Com15] Length = 535 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 90/273 (32%), Gaps = 28/273 (10%) Query: 1 MYKD-----FFVSILCLIILFF----------TSFSTNASILGDIK-KRGFLKCGINTGL 44 M + F + L+ L F T+ S+ + + I+ K+ ++ Sbjct: 36 MKRKHLFHSFVFLMTGLVTLAFGHVAQADNTTTAESSTSETMQKIEPKKDVYVIASDSAF 95 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F ANG+++G DV +++ I+ AL+S Q D + Sbjct: 96 APFEFQNANGEYEGIDVKLMESIAK---LQGFNIRMDYRGFSAALQALESGQADGMIAGM 152 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADY 163 T R+ F + G + K I S L G ++ + GT + L+D+ Sbjct: 153 TVTDERKK--SYDFSDSYFDSGIQLAVKKGDTSIKSYEDLKGKTVGAKVGTESAEFLSDH 210 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + F+ +++ + DA D + + E + S Sbjct: 211 ESEYGYS--IKYFDAADQLYDGLKVGAIDAMMDDYPVIG---YAIKQGQELETPIEKESG 265 Query: 224 SPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255 A A+ + + E N+ + + E Sbjct: 266 GKYAFAVKKGQNPELLNMFNEGLKELKRTGEYD 298 >gi|283768559|ref|ZP_06341471.1| bacterial extracellular solute-binding protein, family 3 [Bulleidia extructa W1219] gi|283104951|gb|EFC06323.1| bacterial extracellular solute-binding protein, family 3 [Bulleidia extructa W1219] Length = 263 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 34/246 (13%), Positives = 66/246 (26%), Gaps = 13/246 (5%) Query: 3 KDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K +IL L ++ + + L +KK G LK G+ F+ + G+D Sbjct: 6 KVVMSAILALGLVACGTKTNEKAEDSLQKVKKAGVLKIGLEGNWKPFSYHDSKDKLVGYD 65 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + + ++ + L + DI+ D T R+ + ++ Sbjct: 66 TEVAQHIAKKLGVKAE---IKEAAWDGLLTGLSTGVYDIVVNGVDVTKERQKAFDMSDAY 122 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + I S L G+T A + Sbjct: 123 AYDRIDL-VVKEGNTNIKSFEDLKSKKSANSTGSTYATI------AEKYGATVSNVPTLA 175 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 E DA +++ T V+ A + +G+ Sbjct: 176 ETMQLVLNGTVDATINADTSVSDYLNTTGEKKLKVVAQLPDITE-YAIPMKKGNDSLKKA 234 Query: 241 VSWTHY 246 V+ Sbjct: 235 VNQALK 240 >gi|329724901|gb|EGG61404.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU144] Length = 487 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 76/251 (30%), Gaps = 16/251 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M + + + S N IK RG L+ G++ + ++ Sbjct: 7 MLSIIILMLSTFTLFISPSTYANEDENWTKIKNRGELRVGLSADYAPLEFEKTIHGKTEY 66 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ + ++ + K++ + + AL++ +IDI+ T R+ + Sbjct: 67 AGVDIELAKKIAKD---NHLKLKIVNMQFDSLLGALKTGKIDIIISGMTTTPERKK--EV 121 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F ++ K ++ G I Q GT E + Sbjct: 122 DFTKPYMITNNVMMIKKDDAKRYQNIKDFEGKKIAAQKGTDQEKIAQTEIE----NSKIS 177 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 R+ E + ++ + + A N + K A+ + Sbjct: 178 SLNRLPEAILSLKSGKVAGVVVEKPVGEAYLKQNSE-LTFSKIKFNEEKKQTCIAVPKNS 236 Query: 235 TEWYNIVSWTH 245 + ++ T Sbjct: 237 PVLLDKLNQTI 247 >gi|325277397|ref|ZP_08143017.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] gi|324097470|gb|EGB95696.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] Length = 261 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 87/260 (33%), Gaps = 11/260 (4%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + L + A L DI RG LK + F V + +G Sbjct: 1 MKNIRSLLLATLLCGGALGAAQAQADALADITARGVLKVAVPQDFPPFGSVGPDLKPRGL 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D + L+ + + P+N+ R L + ++D++ + RE + F Sbjct: 61 DIDTAQLLADKLGVK---LALTPVNSTNRIPFLTTGKVDLVISSLGKNAEREAV--IDFS 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ IS + ++G +I V G+ ++ L FE Sbjct: 116 RPYAPFYLAVFGPEQTSISDIGAIAGKTISVTRGSIEDMELTAVAPK---GAVIKRFEDN 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 AAY + + + + + P++ ++ + SP+ + + + Sbjct: 173 NSTIAAYLSGQVELIASGSVVMAVIA--EKNPAKVPVMKVKLKDSPVYVGLAKQEPALLA 230 Query: 240 IVSWTHYAMVTAEELGITQK 259 V+ T A L + Sbjct: 231 KVNATLDAAKADGSLNRNAE 250 >gi|209516828|ref|ZP_03265679.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209502791|gb|EEA02796.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 260 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 80/251 (31%), Gaps = 21/251 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L+ + S K ++ G++ F A+G GFD Sbjct: 1 MKTMLATLTIALLAVSSVSAIA--------KDWSTVRFGVDASYPPFESKAADGKLVGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + +K ++ + AL+ ++ D + T R+ + F Sbjct: 53 IDLGNEICRRL---DAKCVWIENSFDGMIPALKGRKFDGVLSTMSMTPARQAQIA--FSS 107 Query: 121 ITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K I + L G I V+ G+ E Y++ + ++ Sbjct: 108 KVFRIPTRLVARKGAPIEPTPEALKGKRIGVEQGSIQETYAKTYWEPAG--AVVVPYQDQ 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGD 234 + + A A R DA + L R + + + + A + + D Sbjct: 166 DLVYADLLAGRIDASLQNAVQADLGFLRTPRGKDFAFAGNPLYDAKTLGSGTAIGLRKED 225 Query: 235 TEWYNIVSWTH 245 T+ + Sbjct: 226 TDLQEKIDKAI 236 >gi|15890452|ref|NP_356124.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15158682|gb|AAK88909.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 278 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 89/233 (38%), Gaps = 15/233 (6%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 T +A L + K G + GI + + ++G +G+D D R + + Sbjct: 25 LTPAGADARTLEEAKSSGKIVIGIQGDNAPWGFINSSGVQEGYDADLARGFADYLG---L 81 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 K++++PL R +L++ ++D L + T R + + + K K Sbjct: 82 KVEFVPLAVANRIPSLRTGKVDALFASMGMTPERAK--NVQYAQPYAHNVMSVYATKDKK 139 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 I++ L+G ++ + + L K + + F+ A + + +A G Sbjct: 140 IANFDDLTGMTVGAPKSSPMDTALTAGA---GTKANILRFDDDAATIQAILSGQIEAIGG 196 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 + Y +L ++ + D+++ + A G+ +W + A + Sbjct: 197 N--QFYGDRLAAAGGKDYEVKFDLVTL-YNSAATRPGEKDW----NEALNAWL 242 >gi|242243079|ref|ZP_04797524.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis W23144] gi|242233427|gb|EES35739.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis W23144] Length = 485 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 78/251 (31%), Gaps = 16/251 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M + + + +S N IK RG L+ G++ + ++ Sbjct: 7 MLSIIILMLSTFTLFISSSTYANEDENWTKIKNRGELRVGLSADYAPLEFEKTIHGKTEY 66 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ + ++ + K++ + + AL++ +IDI+ T R+ + Sbjct: 67 AGVDIELAKKIAKD---NHLKLKIVNMQFDSLLGALKTGKIDIIISGMTTTPERKK--EV 121 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F ++ K + ++ G +I Q GT E + Sbjct: 122 DFTKPYMITNNVMMIKKDEAKRYQNIKDFEGKNIAAQKGTDQEKIAQTEIE----DSKIS 177 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 R+ E + ++ + + A N K A+ + Sbjct: 178 SLNRLPEAILSLKSGKVAGVVVEKPVGEAYLKQNSE-LTFSKTKFNEEKKQTCIAVPKNS 236 Query: 235 TEWYNIVSWTH 245 + ++ T Sbjct: 237 PVLLDKLNQTI 247 >gi|317060250|ref|ZP_07924735.1| histidine-binding protein [Fusobacterium sp. D12] gi|313685926|gb|EFS22761.1| histidine-binding protein [Fusobacterium sp. D12] Length = 255 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 79/244 (32%), Gaps = 25/244 (10%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K FV I CL+ K+ L G N F ++ + KGFD+ Sbjct: 18 KKRIFVVICCLLCFACG----------KGKEEATLVVGTNPEFAPFEYMEGE-EIKGFDI 66 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + + + I ++ +N ALQSK+ID++ T R+ + F Sbjct: 67 ELMKQIGEKIGKK---VEIKSMNFDGLLPALQSKKIDVVIAGMTATEERKKH--VNFTKN 121 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y Q ++ K+ + L G I V G T D F + +Y F Sbjct: 122 YYISQQNIMV-KENKEHDLEALKGQKIGVVLGYTG-----DVFISSKHEYAVERFNSASA 175 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A +A + A D A + P K A A+ + + + Sbjct: 176 AILALQADKVSAVILDEE--PAKQYVKQNPG-LSTFAISDGKEEYAIALHKDNVSLLKDI 232 Query: 242 SWTH 245 Sbjct: 233 DKAL 236 >gi|259502421|ref|ZP_05745323.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] gi|259169564|gb|EEW54059.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] Length = 502 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 89/271 (32%), Gaps = 36/271 (13%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASI-------------------LGDIKKRGFLKCG 39 M K + + + + + + A L IK++G L G Sbjct: 3 MKHLKHYLMLLTIIASIIIAPLTALADSGTASSATTSSTTSAATDDSLQKIKQKGVLVVG 62 Query: 40 INTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 + G F ++ GF++ R L+ + ++ ++ +AL+S + Sbjct: 63 TSAGYPPFEFTTKKDGKTEYVGFEMSLARQLAKDLGVK---LEIKNMDFDSLLVALESHK 119 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGT 154 ID+ + T RE + F + + F++HK+ + G ++ + G Sbjct: 120 IDVAIAGINITPEREK--SVDFSKTYHKGTKYFLIHKQDKDKYKNYMDFKGKTVGTENGA 177 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + Y H + + A +AH+ D D + A N Sbjct: 178 MEYAMIKKYIP----DVHEKGLSKWSSLVIALQAHKLDGVLMDSATAKAFAQNNPDLYAF 233 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + S +A A+ +G V+ T Sbjct: 234 NSHMKVTSDG-VAVALPKGANSLKAAVNQTV 263 >gi|257462599|ref|ZP_05627009.1| extracellular solute-binding protein, family 3 [Fusobacterium sp. D12] Length = 241 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 79/244 (32%), Gaps = 25/244 (10%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K FV I CL+ K+ L G N F ++ + KGFD+ Sbjct: 4 KKRIFVVICCLLCFACG----------KGKEEATLVVGTNPEFAPFEYMEGE-EIKGFDI 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + + + I ++ +N ALQSK+ID++ T R+ + F Sbjct: 53 ELMKQIGEKIGKK---VEIKSMNFDGLLPALQSKKIDVVIAGMTATEERKKH--VNFTKN 107 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y Q ++ K+ + L G I V G T D F + +Y F Sbjct: 108 YYISQQNIMV-KENKEHDLEALKGQKIGVVLGYTG-----DVFISSKHEYAVERFNSASA 161 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A +A + A D A + P K A A+ + + + Sbjct: 162 AILALQADKVSAVILDEE--PAKQYVKQNPG-LSTFAISDGKEEYAIALHKDNVSLLKDI 218 Query: 242 SWTH 245 Sbjct: 219 DKAL 222 >gi|171319268|ref|ZP_02908383.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171095525|gb|EDT40490.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 259 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 79/220 (35%), Gaps = 13/220 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ GI F G +GFDVD A+ + + K ++ ALQ+ Sbjct: 26 TLRFGIEAAYPPFESKSPAGQLQGFDVDIGNAVCAKL---NMKCVWVENAFDGLIPALQA 82 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153 ++ D ++ + T R+ G+ F P Y + H+ + + L G + V G Sbjct: 83 RKFDAINSAMNITAKRK--QGIDFTPAIYVVPIVMVTHRGSPLRPDAASLRGKHVGVLQG 140 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 ++ E L ++ + + + ++I A A R DA + L + Sbjct: 141 SSQEDFLKAHWANAGVA--VVSYADQDQIYADLVAGRLDAAVQEAQTAQDGFLDKPAGRD 198 Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248 + I+ + + + +GD + A+ Sbjct: 199 YQIVGEPLKDPATLGEGTGFGMRKGDKALQTKIVGALDAL 238 >gi|15807148|ref|NP_295877.1| amino acid ABC transporter periplasmic amino acid-binding protein [Deinococcus radiodurans R1] gi|6459952|gb|AAF11702.1|AE002049_7 amino acid ABC transporter, periplasmic amino acid-binding protein [Deinococcus radiodurans R1] Length = 305 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 76/225 (33%), Gaps = 14/225 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 S A +IKK G +K F +K GF+VD AL + K+++ Sbjct: 71 SAEARTWAEIKKSGTIKVATEGAFPPFNLMKGK-QLTGFEVDLANALGKQLG---LKVEW 126 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + L + D + + T R+ + F Y G + + + Sbjct: 127 TVQPFDSLLIGLNQDRYDFVIASHGITPERQK--AVDFSDPHYCTGGAIVTRPGGPL-TA 183 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G S+ VQ GTT + F R + AA A R DA+ GD Sbjct: 184 KALAGKSVAVQVGTTYLENVRKVPG----VGDVKTFPRDVDAQAALMAGRVDAWVGDRFT 239 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L D++ + A A+ +G+ ++ Sbjct: 240 GLDLVKAQKGKIVQ---GDLLFRERNAMAVKKGNVTLLKELNAAL 281 >gi|170738481|ref|YP_001767136.1| extracellular solute-binding protein [Methylobacterium sp. 4-46] gi|168192755|gb|ACA14702.1| extracellular solute-binding protein family 3 [Methylobacterium sp. 4-46] Length = 272 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 81/231 (35%), Gaps = 9/231 (3%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 S + A + IK+RG L G+ F +G+ G + D ++ + + + Sbjct: 19 SGARAAEGVDAIKQRGKLIVGVKADYRPFGFRDPSGNIIGLEPDLAADIAKRLGVELELV 78 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 + + R LQ ++D+L R + + K GI+ Sbjct: 79 PVV---SSNRIEFLQQGKVDLLIATISDKPERRRVVQAIDPQYYSDYVNILLPKKG-GIT 134 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 QL G +C +G +A + A + F+ E+ A + C Y D Sbjct: 135 EWGQLKGKPVCATSGAWYNKDVARTYGA-----EIVAFDGSEKPLFALKQGNCVGYLYDQ 189 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 + + ++ +++ + I ++P A+ G+ ++ + Sbjct: 190 TFIQGRLGEDEWKADYAMPLKGILEAPWIMAVASGNASLQAVMETATKDWM 240 >gi|91779877|ref|YP_555085.1| basic amino acid ABC transporter periplasmic protein [Burkholderia xenovorans LB400] gi|91692537|gb|ABE35735.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 255 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 88/246 (35%), Gaps = 19/246 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + + + +F+ +++ L+ GI+ +G +KGFDVD Sbjct: 2 KISLMILSAALAFSSGAFAADSTT---------LRLGIDPTYPPMDSKAPDGSFKGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + I ++ Q++ L ALQ+++ID + + T RE + F Sbjct: 53 LGNEICKRI---HARCQWVELEFSGMIPALQARKIDAILSSMAITEKRE--QQILFSSKL 107 Query: 123 YFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + I + ++ S++ L+G +I VQ+GT E + H + ++ EE Sbjct: 108 FQFKSRLIARQGSALAGSLNALAGKAIGVQSGTQFEGYALKNWAPLG--VHVVAYKSQEE 165 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI--ISKSPLAPAIIQGDTEWYN 239 + A R D L + + + + + + +T Sbjct: 166 VFADLENGRLDGALLGSVEADYGFLRTPAGKGFAFVGEPLSMGDRGVGIGLRKDETAVQA 225 Query: 240 IVSWTH 245 ++ Sbjct: 226 SINEAI 231 >gi|319796471|ref|YP_004158111.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] gi|315598934|gb|ADU40000.1| extracellular solute-binding protein family 3 [Variovorax paradoxus EPS] Length = 257 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 39/232 (16%), Positives = 72/232 (31%), Gaps = 14/232 (6%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 +F A L + FA + GFD+D A++ Sbjct: 19 SLTFGAQAQTPNR-----ELTVASSATYAPFAFENKDKQIVGFDIDIINAIAKQ---QGL 70 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 KI+ + F AL + +D++ R+ F P + Q + K Sbjct: 71 KIKVVNTPFTGIFGALNNGDVDLVISGVTINDKRK--QSYDFTPPYFAARQLIALPKNST 128 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 ++S+ L+G I V + +T + + F + FE I + DA G Sbjct: 129 VASLKDLAGKKIAVVSASTADDIASREFGK--TSPNIRRFESTPLIISELAGGGVDAAMG 186 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 D + + + + +GD + +S A+ Sbjct: 187 DNGVIAYRVAQHADLKTLD--DKSFPEEGFGIVVKKGDKALLDKLSAGLAAI 236 >gi|224368640|ref|YP_002602803.1| ABC-type amino acid transporter, periplasmic amino acid-binding protein [Desulfobacterium autotrophicum HRM2] gi|223691356|gb|ACN14639.1| ABC-type amino acid transporter, periplasmic amino acid-binding protein [Desulfobacterium autotrophicum HRM2] Length = 267 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 96/260 (36%), Gaps = 14/260 (5%) Query: 1 MY-KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K L +I S + A+ L DI KRG L+ + +G +A + NGD G Sbjct: 1 MKLKQMLTMALAFLIALSFSGLSFANNLTDIVKRGELRVAVQSGNPPYAFIDKNGDHTGS 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++F + ++ A+ + + + AL S + DIL+ + TL R SL + F Sbjct: 61 MIEFTKGMADAMGVKLKILDF---DWDGLIPALLSGKADILAADMTPTLKR--SLKITFT 115 Query: 120 PITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + K ++ ++ ++ V G+T E Y +K Sbjct: 116 DPWIYVQPCIFTRTDKAYQTLEDVNKSDVTVGVLLGSTGENIARTYLPNAKIKA---YKG 172 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI--ISKSPLAPAIIQGDT 235 I A A DA D A+ + P+ +L K PLA A+ Sbjct: 173 GGRMIVQALVAGHVDAGVNDDLAVLTVLSDFP-PNSVRLLDKRLGQGKDPLAFAVRHEAV 231 Query: 236 EWYNIVSWTHYAMVTAEELG 255 + ++ + ++ E Sbjct: 232 NLWQWINLYFQTIRSSGEYD 251 >gi|239833585|ref|ZP_04681913.1| periplasmic binding ABC transporter protein [Ochrobactrum intermedium LMG 3301] gi|239821648|gb|EEQ93217.1| periplasmic binding ABC transporter protein [Ochrobactrum intermedium LMG 3301] Length = 267 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 83/276 (30%), Gaps = 22/276 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGF 59 M + + + +A +K GI F E A G W G+ Sbjct: 8 MKCLLASLCVGVTFALAGVGAASAE---------QVKLGIAAEPYPPFTEPDATGKWHGW 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++DF A+ D P+ AL + +ID++ + T R + + F Sbjct: 59 EIDFADAVCKEAKLD---CVITPVAWDGIIPALTTGKIDMIVGSMSMTPERLKT--IDFS 113 Query: 120 PITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y I K + L +I VQ T + +F ++ Sbjct: 114 DKYYNTPTIVIGTKDLKFDATPEGLKDKTIGVQVSTIHQAYAVKHFAPAG--ATIKEYQT 171 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 +E + A R DA D AL T N + L P + G + Sbjct: 172 QDEANNDLTAGRIDAVQADSLALRTFLATDNGKACCEEKGTVAKDVEVLGPGVGIGLRKG 231 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDV 273 + A + A + +K + D+ Sbjct: 232 DTELKDKLNAAIKA---IRANGTYDTFTKKYFDFDI 264 >gi|94990641|ref|YP_598741.1| glutamine-binding protein / glutamine transport system permease protein glnP [Streptococcus pyogenes MGAS10270] gi|94544149|gb|ABF34197.1| Glutamine-binding protein / Glutamine transport system permease protein glnP [Streptococcus pyogenes MGAS10270] Length = 724 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 97/293 (33%), Gaps = 38/293 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V +L ++ +F T +A + + +T F ++ +KG D Sbjct: 1 MTHKIKVLLLAIMSIFLTCNIASAETIAIV---------SDTAYAPFEFKDSDQIYKGID 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ D + + +A A+QS Q L T T R+ F Sbjct: 52 VDIINEVAKRQSWD-FSMSFPGFDAAVN--AVQSGQASALMAGTTITNARKKV--FHFSE 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K I S L G ++ V+ GT + L +Y Y F+ + Sbjct: 107 PYYDTKIVIATRKANAIKKYSDLKGKTVGVKNGTAAQAFLNNY--KKKYDYTVKTFDTGD 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP--AIIQGDTEWY 238 + + A A D + + N + + P+ ++ + + Sbjct: 165 LMYNSLSAGSIAAVMDDEAVIQYAISQNQD------IAINMKGEPIGSFGFAVKKGSGYD 218 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290 +V+ + A + + D T + ++LG D + +A G Sbjct: 219 YLVNDFNTA-------------LKAMKADGTYQAIMTKWLGTDDKATTSQATG 258 Score = 94.8 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 79/256 (30%), Gaps = 16/256 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + S A+ IK + ++ F G + G D Sbjct: 241 MTKWLGTDDKATTSQATGNPSAKAT---PIKDSYKIV--SDSSFAPFEFQNGKGKYVGID 295 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ +A++ KI+ A+QS Q D + T R+ F Sbjct: 296 IELIKAIAKQ---QGFKIEIANPGFDAALNAVQSSQADGVIAGATITDARKAI--FDFSD 350 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + K I + L ++ + GT++ L + + + F+ Sbjct: 351 PYYTSNIILAVKAGKNIKNYEDLDRKTVGAKNGTSSYSWLKENAPKYGY--NVKAFDDGS 408 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYN 239 + + + DA D LK + + IS + A+ + + E Sbjct: 409 SMYDSLNSGSVDAIMDDE---AVLKYAISQGRRFETPLEGISTGEVGFAVKKGTNPELIE 465 Query: 240 IVSWTHYAMVTAEELG 255 + + A+ + + Sbjct: 466 MFNNGLAALKKSGQYD 481 >gi|6706990|gb|AAF25531.1|AF104994_1 periplasmic binding protein [Streptomyces coelicolor A3(2)] Length = 321 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 81/255 (31%), Gaps = 20/255 (7%) Query: 17 FTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDD 74 + A L I+ +G +K G + G D D AL + Sbjct: 49 SAGGAPLADKLPQSIRDKGTIKVGSDIAYAPVEFQGRTPAKTVGIDPDLADALGKQLGVK 108 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI----------SLGLAFRPITYF 124 ++ L+SK+ DI T R+ G F + Sbjct: 109 ---FEFENGTFDTLITGLRSKRYDIAMSAMTDTKDRQEGIDGDTGKKVGPGGDFVD-YFT 164 Query: 125 DGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKA--HNMKYHPIVFERVE 180 G K +GI + S L G + VQ GT +E + K F+ + Sbjct: 165 AGVSIYTKKGDDQGIKTWSDLCGKKLVVQRGTVSEDLAKAENEKCPAGKKISMQPFDNDQ 224 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + RA DA + D T+ + ++ + + +P A+ + +T+ + Sbjct: 225 QAQTRLRAGGADAGSSDFPVAAYAVKTSGGGKDFELVGEQVEAAPYGIAVAKDNTQLRDA 284 Query: 241 VSWTHYAMVTAEELG 255 + A++ E Sbjct: 285 LKAALDAVIANGEYK 299 >gi|282861063|ref|ZP_06270128.1| extracellular solute-binding protein family 3 [Streptomyces sp. ACTE] gi|282563721|gb|EFB69258.1| extracellular solute-binding protein family 3 [Streptomyces sp. ACTE] Length = 320 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 75/238 (31%), Gaps = 20/238 (8%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +K G +K G N V NG G D D AL + ++ + Sbjct: 61 EKYRKSGVIKVGTNAEYAPMESV-ENGKIVGVDPDLADALGKQLGVK---FEFTSGSFDG 116 Query: 88 RFLALQSKQIDILSRNTDWTLLREI---------SLGLAFRPITYFDGQGFIMHKKKG-- 136 AL + + DI + R+ G+ F + G K Sbjct: 117 LITALNTGRHDIAMSSITDNKQRQEGLDDSGKKLGKGVDFVD-YFLAGTAVYTKKGNPEG 175 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKA----HNMKYHPIVFERVEEIDAAYRAHRCD 192 I S+ L G VQ GTT E L KA FE E ++ Sbjct: 176 IKSIEDLCGKVAAVQRGTTYEDALKKQSKACTDGGGKAVKIESFENDTEAQTRVKSGGAV 235 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A D L ++ ++ + + P A+ + +TE +++ A++ Sbjct: 236 AGVNDYPVAVDLARKAGGGNDFEVVGEQVDAGPFGIAVNKDNTELRDVLKEAVDAIIA 293 >gi|307306802|ref|ZP_07586543.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] gi|306902093|gb|EFN32691.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] Length = 294 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 41/264 (15%), Positives = 87/264 (32%), Gaps = 21/264 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKG 58 M K I L + + S NA+ L +K G + V + KG Sbjct: 19 MNKH----IAALTVACLAATSANAAGLPERVKSAGKVVVANQPNYPPMEYVDPATNELKG 74 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D+D AL+ + + +++ + ++ +LQ+ ++D++ R L F Sbjct: 75 VDIDLGVALAKELG---TTVEWSNIGFEQMISSLQTGRVDLIHSGMSDLPKR--RDTLDF 129 Query: 119 RPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN-----MKY 171 G F +K +++ G ++ + T+ A + A+ Sbjct: 130 ID-YMKSGAQFYTSFARKDEFKTLTDFCGKTVGMSRRTSFPDETAKWSAANCEAKGLPAI 188 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + E + A + R DA L L + ++ + + Sbjct: 189 KVVGTEGSADARAQLKQGRLDAAVQGSETLPYLMDLEKD--TYAVVGEPFTVVYQGIGFA 246 Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255 + DTE + + ++ + E Sbjct: 247 KKDTELRDAYAAALKGLMESGEYK 270 >gi|226941144|ref|YP_002796218.1| Glutamine transport system substrate-binding protein precursor [Laribacter hongkongensis HLHK9] gi|226716071|gb|ACO75209.1| Glutamine transport system substrate-binding protein precursor [Laribacter hongkongensis HLHK9] Length = 271 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 36/255 (14%), Positives = 75/255 (29%), Gaps = 15/255 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKR-----GFLKCGINTGLVGFAEVKANGDW 56 ++ +S + ++ A+ G + F + Sbjct: 5 RRNLVLSAILSAVVLAGCGKKEAAPEAAAAAPEAPAVKEYVVGTDAAYAPFEYENDKKEV 64 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +GFD+D A + K++++ + F +L + DI+ + T R+ + Sbjct: 65 EGFDIDVLSAAAEKGG---FKVKFINTPWEGIFASLGNGDRDIVVSSVTITDERK--QTM 119 Query: 117 AFRPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + Q ++ K I + L G + VQ GTT + Sbjct: 120 DFSEPYFEARQLIVVSKNDAAGIKKFADLKGKKVAVQTGTTGDEVTQKLLGK--SSPDIK 177 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQG 233 FE DA D + N + + + A+ +G Sbjct: 178 RFESTPLALKELENGGVDAVVADNGVVVNYLSNNGDKGLVSVEDTESFAPEYYGIAVKKG 237 Query: 234 DTEWYNIVSWTHYAM 248 + ++ A+ Sbjct: 238 NQALQEQINKGLAAI 252 >gi|325129939|gb|EGC52739.1| L-cystine ABC transporter, periplasmic L-cystine-binding protein [Neisseria meningitidis OX99.30304] Length = 250 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 27/198 (13%), Positives = 58/198 (29%), Gaps = 10/198 (5%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 + + S++ I +G + G F +G G+DV+ RA++ + Sbjct: 3 ASSAPAQSAVSGSLIERINNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLG 62 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 +++ L++ + D+++ T E + G + Sbjct: 63 VK---VEFKETQWDSMMAGLKAGRFDVVANQVGLT-SPERQATFDKSDPYSWSGAVLVAR 118 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I S+ + G + KA + + + + R D Sbjct: 119 NDSNIKSIDDIKGVKTAQSLTSNYGE------KAKAAGADLVAVDGLAQSLTLIEQKRAD 172 Query: 193 AYTGDISALYALKLTNDR 210 A D A+ N Sbjct: 173 ATLNDELAVLDYLKKNPN 190 >gi|21910533|ref|NP_664801.1| putative glutamine ABC transporter glutamine-binding protein/permease protein [Streptococcus pyogenes MGAS315] gi|28895773|ref|NP_802123.1| hypothetical protein SPs0861 [Streptococcus pyogenes SSI-1] gi|21904733|gb|AAM79604.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pyogenes MGAS315] gi|28811022|dbj|BAC63956.1| hypothetical protein [Streptococcus pyogenes SSI-1] Length = 724 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 97/293 (33%), Gaps = 38/293 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V +L ++ +F T +A + + +T F ++ +KG D Sbjct: 1 MTHKIKVLLLAIMSIFLTCNIASAETIAIV---------SDTAYAPFEFKDSDQIYKGID 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ D + + +A A+QS Q L T T R+ F Sbjct: 52 VDIINEVAKRQSWD-FSMSFPGFDAAVN--AVQSGQASALMAGTTITNARKKV--FHFSE 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K I S L G ++ V+ GT + L +Y Y F+ + Sbjct: 107 PYYDTKIVIATRKANAIKKYSDLKGKTVGVKNGTAAQAFLNNY--KKKYDYTVKTFDTGD 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP--AIIQGDTEWY 238 + + A A D + + N + + P+ ++ + + Sbjct: 165 LMYNSLSAGSIAAVMDDEAVIQYAISQNQD------IAINMKGEPIGSFGFAVKKGSGYN 218 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290 +V+ + A + + D T + ++LG D + +A G Sbjct: 219 YLVNDFNTA-------------LKAMKADGTYQAIMTKWLGTDDKATTSQATG 258 Score = 94.4 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 79/256 (30%), Gaps = 16/256 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + S A+ IK + ++ F G + G D Sbjct: 241 MTKWLGTDDKATTSQATGNPSAKAT---PIKDSYKIV--SDSSFAPFEFQNGKGKYVGID 295 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ +A++ KI+ A+QS Q D + T R+ F Sbjct: 296 IELIKAIAKQ---QGFKIEIANPGFDAALNAVQSSQADGVIAGATITDARKAI--FDFSD 350 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + K I + L ++ + GT++ L + + + F+ Sbjct: 351 PYYTSNIILAVKAGKNIKNYEDLDRKTVGAKNGTSSYSWLKENAPKYGY--NVKAFDDGS 408 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYN 239 + + + DA D LK + + IS + A+ + + E Sbjct: 409 SMYDSLNSGSVDAIMDDE---AVLKYAISQGRRFETPLEGISTGEVGFAVKKGTNPELIE 465 Query: 240 IVSWTHYAMVTAEELG 255 + + A+ + + Sbjct: 466 MFNNGLAALKKSGQYD 481 >gi|327191524|gb|EGE58539.1| amino acid ABC transporter substrate-binding protein [Rhizobium etli CNPAF512] Length = 268 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 83/266 (31%), Gaps = 19/266 (7%) Query: 1 MYKDFFVSIL---CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + ++L + + + + ++R ++ + F + AN + Sbjct: 1 MLRISIQTLLRGALMAGGLGVVLAAVSPLPVAAQERMPMRVAVEGAFPPFNYLDANNKLQ 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD+D AL + Q++ + L +++ D + + +L R +A Sbjct: 61 GFDIDIANALCE---TGKFECQFIIEKWDDMIPDLVAEKYDAIISSMSMSLER--RQKVA 115 Query: 118 FRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y FI K I+ S + L+G + V + T E ++ V Sbjct: 116 FTEKYYNSPSVFIARKDSPITDVSPAALNGKKLGVTSSTAQESYANHFYP----DMKKTV 171 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-----LPDIISKSPLAPAI 230 F E+ R D D A+Y + + A+ Sbjct: 172 FRSSPELYKGLSDGRVDIILEDKLAIYDWIANTKAGTCCAFKGPDLVDVTYFGEGAGIAV 231 Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGI 256 D E ++ + + Sbjct: 232 RLDDKERLARLNEALKTIKEDGTYDM 257 >gi|300714866|ref|YP_003739669.1| conserved uncharacterized protein [Erwinia billingiae Eb661] gi|299060702|emb|CAX57809.1| conserved uncharacterized protein [Erwinia billingiae Eb661] Length = 264 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 83/250 (33%), Gaps = 22/250 (8%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 L L L S I G L+ + F NG GF++D A+ Sbjct: 7 ALMLATLALCCSSA-------IAAEGTLRVAADLAYPPFQYRDVNGKPAGFEIDITNAVC 59 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 AI K Y+ + +L +K++D + T+ R+ + F Y Sbjct: 60 KAI---AVKCDYVVSSFDAEIPSLMAKKVDFI-SPLGATIKRKK--SIDFSDFIYHVPSQ 113 Query: 129 FIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + K + + L G SI VQ G+ E+ Y+ H + + I Sbjct: 114 LVARKGTNLQPTAESLQGKSIAVQQGSIQEMYANKYWAPHG--VEIKTYPDQDVIYQDLA 171 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVS 242 A R D A+ L + + + L A + +GD + +++ Sbjct: 172 AGRLDGALSPAVAITFGFLHKPEGKDFALSGPEVRDDLLYSIGSAYGVRKGDEKTQQMLN 231 Query: 243 WTHYAMVTAE 252 A + A+ Sbjct: 232 QGL-AKIMAD 240 >gi|296126897|ref|YP_003634149.1| extracellular solute-binding protein family 3 [Brachyspira murdochii DSM 12563] gi|296018713|gb|ADG71950.1| extracellular solute-binding protein family 3 [Brachyspira murdochii DSM 12563] Length = 247 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 88/248 (35%), Gaps = 21/248 (8%) Query: 1 MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M+K+ F I+ L I+ + + L G N F + + GF Sbjct: 1 MFKNNLFKIIIALSIVLTVFIGCQ-----KKEDKNKLYVGTNAEFEPFEYREGD-KIVGF 54 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D ++ I + I+ + + AL++K+ID++ T R+ + F Sbjct: 55 DIDLINEIAKLIGAE---IEVVDMQFDGLLPALEAKKIDLIVAGMTATEERKQF--VNFS 109 Query: 120 PITYFDGQGFIM-HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y Q ++ I++ +G + V G T ++ +++ F Sbjct: 110 DPYYNSKQSIVVLSNNTDITTFDNFAGKKVGVVLGYTGDILVSEM-----TNVEVQKFNA 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E A ++ + DA D N +E ++ + + A+ + DTE Sbjct: 165 TSETILALKSQKVDAVVLDYEPAKNYVAQN---NELKLIETDSATEEYSIAMRKDDTELL 221 Query: 239 NIVSWTHY 246 V+ Sbjct: 222 TKVNDALK 229 >gi|261406265|ref|YP_003242506.1| polar amino acid ABC transporter inner membrane subunit [Paenibacillus sp. Y412MC10] gi|261282728|gb|ACX64699.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. Y412MC10] Length = 480 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 34/283 (12%), Positives = 92/283 (32%), Gaps = 25/283 (8%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55 M + F ++++ +++L F S ++ + G + + + Sbjct: 1 MKRKFTAWMTLFMVVVLSFGSLVHAEG------EKKTVILGTSADYAPYEFHKTIDGVDT 54 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D + ++ + + + + L S ++D + + T + Sbjct: 55 IVGFDIDIAKEIAKDLGAE---LIIKDTSFDALLPELTSGRVDFVISGMNPTE--DRRKS 109 Query: 116 LAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F Y Q ++ K+ +++ L GA I VQ + E A+ Sbjct: 110 IDFSEPYYAAEQSVVVRKEDALKFNTLESLEGARIGVQKSSIQESIAKTIPNAN-----V 164 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + +++ ++ + R D + A + +G Sbjct: 165 VSLDKIPDLLLQLESERVDVVLAEYPIAKTNMNEAT--MAITDAKPTAENDAYAIGVRKG 222 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 + E ++ T + ++ + + ++ T ++ F Sbjct: 223 NEELLGSINATLERLKENNQIQKFVDDASDLAAGRTAENLNTF 265 >gi|171910768|ref|ZP_02926238.1| amino acid ABC transporter, amino acid-binding protein [Verrucomicrobium spinosum DSM 4136] Length = 322 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 79/249 (31%), Gaps = 17/249 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 +V+ L S KK L ++ F V G++ G VD R Sbjct: 52 WVAASAACALVGCGPSDQPGAPAKPKK---LVVAMDATYPPFEVVDEKGEFYGVSVDLGR 108 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 L + + +++ +N AL+S +D + + R + F Sbjct: 109 ELGKFLGRE---VEFRNINFDGLIAALKSGSVDCVISSMSANDDRRR--SIDFSDPYVKT 163 Query: 126 GQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G + K + S+ L G + V+ GTT E + +V + Sbjct: 164 GLAILAAAKSPVQSLEDLKAPGRRVAVRLGTTGEQYARQFLP----DASLVVLDSDTACV 219 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 DA+ D +L P +L + + A I QG+T+ + Sbjct: 220 MEVVKAGVDAWIYDQLSLMNYHNR--HPEATRVLLQPLREEVWAIGIQQGNTDLKTKANE 277 Query: 244 THYAMVTAE 252 A AE Sbjct: 278 FL-AKFRAE 285 >gi|326315081|ref|YP_004232753.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323371917|gb|ADX44186.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 274 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 75/224 (33%), Gaps = 14/224 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 +L +I+K G ++ I F + + +G+D+D ++ + ++ +P+ Sbjct: 39 DVLANIQKAGVVRVAIPQDFPPFGSLGTDLKLQGYDIDMANLVAKELGVK---VELVPVT 95 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + R L + + D++ + R + F + K+ I + L+ Sbjct: 96 STNRIPYLTTGKADLVISSLGKNAERAKV--IDFTQAYAPFPKSVYGPKEAVIKGPADLA 153 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA- 203 G +I V G+T +L+L A +E +Y + T A Sbjct: 154 GKTIGVTRGSTEDLSLTKLAPA---SATIKRYEDNNATAQSYLTGQVQLVTLGNIVANAV 210 Query: 204 -LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + D P + +G+ V Sbjct: 211 NERTKLRQLDAKFAVEDT----PCYVGVAKGEDALLQKVDAIIT 250 >gi|254429528|ref|ZP_05043235.1| Bacterial extracellular solute-binding protein, family 3 [Alcanivorax sp. DG881] gi|196195697|gb|EDX90656.1| Bacterial extracellular solute-binding protein, family 3 [Alcanivorax sp. DG881] Length = 260 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 84/253 (33%), Gaps = 16/253 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF-LKCGINTGLVGFAEVKANGDWKGF 59 M K ++ + L S L G L+ G+ G G Sbjct: 1 MMKRMGWILVLAVGLLAGCSSNGHGELE-----GEALRVGVMPDYPPLVFR-EEGKVVGL 54 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 + DF LS + S +Y L+ + F AL++ +IDI+ T R+ + + Sbjct: 55 ERDFAEQLSQDLERPFSLHEYTQLS--DLFAALKNNEIDIIMSGISITPARQKAFAFSLP 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQ--AGTTTELTLADYFKAHNMKYHPIVFE 177 T + +++ L V GTT E + + A F Sbjct: 113 YTTIGQMAMIRLDDAARLATPGALFTGQYRVGYKNGTTGEAFVKETMDA-----QTRGFN 167 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E A DA+ D ++ L + P + + L ++K LA + + D+E Sbjct: 168 SNTEATQALVNGDIDAFIHDAPTVWNLANKREYPVKLLGLYKPLTKEQLAWVMRKNDSEL 227 Query: 238 YNIVSWTHYAMVT 250 V + V Sbjct: 228 KQQVDTVLKSWVN 240 >gi|325525789|gb|EGD03519.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. TJI49] Length = 259 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 37/255 (14%), Positives = 90/255 (35%), Gaps = 22/255 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + I L+++ ++++ + S ++ G++ F A+G GFD Sbjct: 1 MKRTPMLLIGALLLVAGSAYARDWST---------IRFGVDASYPPFESKTADGKLVGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L + ++ ++ L++++ D + T R +AF Sbjct: 52 IDVGNELCRRL---NAQCVWVENAFDGMIPGLKARKFDGILSTMSMTPAR--VKQIAFTS 106 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + K + + L+G SI V+ G+ E ++ + + + + Sbjct: 107 KLFHVPTRLVTRKGANLQPTAESLAGKSIGVEQGSMQETYAKVHWGSKG--VNIVSYADQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +++ A A R D + L R + + + A + + + Sbjct: 165 DQVYADLLAGRLDGSLQNAVQAERGFLNTPRGRPYDFAGPALDDKAIFGPGTAIGLSKDN 224 Query: 235 TEWYNIVSWTHYAMV 249 T+ + AM+ Sbjct: 225 TDLKEKLDAAIAAMI 239 >gi|260891035|ref|ZP_05902298.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Leptotrichia hofstadii F0254] gi|260859062|gb|EEX73562.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Leptotrichia hofstadii F0254] Length = 263 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 81/248 (32%), Gaps = 11/248 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M ++ + LI LF S G +K G F +G G Sbjct: 1 MKNILKLTGILLIGLFLISCGRKQENGKSASSEGKQKVKVGTEGVYAPFTFTDGSGKLTG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +DV+ + D I+++P FL L+SK+ D ++ RE F Sbjct: 61 YDVEVVEEIGKRANLD---IEFVPTPWDSMFLGLESKKFDFIANEIAKNPEREK--KYTF 115 Query: 119 RPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 I+ K + I ++ L G + G+ TL D F + + Sbjct: 116 SDDYLVSAAQIIVKKGRTDIKTLEDLKGKRVMTGVGSNYNKTLTD-FDKNKEINYAYFDG 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 V + DA D T R + I+ + ++K+P+ + E Sbjct: 175 NVSIALEEIAQGKADATLNDRLT--VGYFTKQRGNLVEIVGEPVTKTPVYFTFRKDSEEL 232 Query: 238 YNIVSWTH 245 N V+ Sbjct: 233 KNKVNKAL 240 >gi|167724971|ref|ZP_02408207.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei DM98] gi|167907857|ref|ZP_02495062.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei NCTC 13177] Length = 240 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 74/219 (33%), Gaps = 6/219 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSKI 78 +A L I + V F + GF D A+ + +I Sbjct: 15 HARTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVVDDVRKKLKMPGLQI 74 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Y+P+ + R L + D+ +T T R ++F ++ G ++ K I Sbjct: 75 AYIPVTGQNRNPLLVNDTYDLEGGSTTNTAAR--GQDVSFSMNLFYAGTRVLVKKASRIR 132 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G ++ AG+T E + Y H++ + + + R D Sbjct: 133 GYADLAGKTVATAAGSTNENVIRKYAADHHLDIDVVPAKDYAAGPRMVESDRTAVLALDD 192 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 L+ ++ P + D + P + +GD Sbjct: 193 VLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDPAS 231 >gi|21910051|ref|NP_664319.1| putative ABC transporter [Streptococcus pyogenes MGAS315] gi|21904242|gb|AAM79122.1| putative ABC transporter [Streptococcus pyogenes MGAS315] Length = 270 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 68/233 (29%), Gaps = 14/233 (6%) Query: 28 GDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 IKK L ++ F V G DV +A++ + D ++ P++ Sbjct: 32 ERIKKTRKLVVAVSPDYAPFEFKALVNGKDTIVGADVQLAQAIADELDVD---LELSPMS 88 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS--VSQ 142 +LQ+ + D+ T R F Y +M + +S Sbjct: 89 FDNVLSSLQTGKADLAISGISHTKERAKV--YDFSIPYYQAENAIVMRASDAKVTKNISD 146 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L+G + Q G+ E + N I + E +A + A T + Sbjct: 147 LNGKKVAAQKGSIEEGLVKIQLPKAN----LISLTAMGEAINELKAGQVYAVTLEAPVAA 202 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + A A+ + + V+ + E Sbjct: 203 GFLAQHKDLALAPFSLKTSDGDAKAVALPKNSGDLTKAVNKVIAKLDEQERYK 255 >gi|167758322|ref|ZP_02430449.1| hypothetical protein CLOSCI_00661 [Clostridium scindens ATCC 35704] gi|167664219|gb|EDS08349.1| hypothetical protein CLOSCI_00661 [Clostridium scindens ATCC 35704] Length = 263 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 76/259 (29%), Gaps = 22/259 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGD----------IKKRGFLKCGINTGLVGFAEV 50 M K + LCL + F S + + + +T F Sbjct: 1 MKKKLLAAFLCLTMAF--SLAACGDSEDAGKTDKKKDSKDDGKKVYQVATDTTFAPFEFE 58 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 GD G D+D A++ + + + AL++ Q D + T R Sbjct: 59 NDEGDMVGIDLDILAAIAEDQGFEYE---LQIVGFQAAVNALEAGQADAVIAGMSITDER 115 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 + F Y G G + K I S L G ++ + GT + Sbjct: 116 KE--KYDFSDEYYQSGVGMAVKKDSDIDSYEDLKGKTVAAKLGTEGCTFAESIADQYGF- 172 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 FE + + A D + R E + D+ +P A+ Sbjct: 173 -TVTQFEDSSTMYQDVISGNTVACFEDYPVMGYEI---SRGLELKLPLDMEKGAPYGFAV 228 Query: 231 IQGDTEWYNIVSWTHYAMV 249 ++G+ + A + Sbjct: 229 MKGENAELLKMFNAGLANL 247 >gi|258645623|ref|ZP_05733092.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Dialister invisus DSM 15470] gi|260402983|gb|EEW96530.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Dialister invisus DSM 15470] Length = 265 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 73/230 (31%), Gaps = 14/230 (6%) Query: 29 DIKKRGF---LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 D K G ++ G T F K + + GFD+D A+ + SK+++ + Sbjct: 35 DAAKSGVPSIVRVGAETTFPPFEFTKDD-KYVGFDLDLAEAVIKQMG---SKMEFKSMGF 90 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 A+QS QID+++ RE + + + + + L G Sbjct: 91 DALIPAVQSGQIDMIASGLSANPEREKQVAFSDVYFDKNGFVIIVNKDNDSLKDWADLEG 150 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + Q GT + + K + + RA DA+ D Sbjct: 151 KKVGAQVGTEPVKMIQE------AKGEVKQLDSNAQAFMELRAKTLDAFVVDQPV-AMFY 203 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + I+ + A+ + + E V+ + E Sbjct: 204 MKQGGSEDLKIVGTPKTDVGFVFAMKKENKELQAAVNKALKELKANGEYD 253 >gi|325126022|gb|ADY85352.1| Glutamine ABC transporter solute-binding component [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 227 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 71/195 (36%), Gaps = 7/195 (3%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G +GF++D A++ I SK + P+ K R L + +D + T R Sbjct: 5 KTGKIEGFEIDLATAITKQILGPKSKAVFRPITEKTRITLLHNGSLDAVISTMTITKER- 63 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + F + + + I+ K I S++ L+ + V A T+ +A+ K Sbjct: 64 -MKVIDFSDVYFNANESMIVKKSSKIRSIADLNKKGVVVIAIKGTD--VANQVAKLASKA 120 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 F+ A +A + D D L L E + +++ P + Sbjct: 121 SVKQFDDYGSAFNALKAGQGDVMIDDNGILAGLIADTP---EFTLTKASLAEEPYGIGVE 177 Query: 232 QGDTEWYNIVSWTHY 246 +G TE ++ Sbjct: 178 KGQTEMRQAINQALK 192 >gi|300362096|ref|ZP_07058273.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] gi|300354715|gb|EFJ70586.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] Length = 544 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 78/228 (34%), Gaps = 12/228 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWKGFDVDFCRALSSAIFDDPSKI 78 S+L IKK G L G + + G D++ + ++ + K+ Sbjct: 82 AEGSVLKKIKKSGELVVGTSADYPPLEFTASENGKTKYVGVDIELAKDIAKDL---NVKL 138 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGI 137 ++ +AL++ ++D++ T R+ S+ + + K Sbjct: 139 VIKNMSFDSLLVALETGKVDMVISAMTPTPERKQSVAFSKIYYKPSGEYFLVNKKDKDKY 198 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +S+ L G +I Q G+ + K ++ + A ++ + A + Sbjct: 199 TSIQSLKGQTIGAQTGSNQYNLVKSQMK----DSKLKGLGKINNLVLALQSGKVSAVVVE 254 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + N+ V ++S A AI +G E V+ T Sbjct: 255 E-LIAKAYAENNNSLAAVRSNLKETQSGNAVAIAKGQDELVAQVNKTI 301 >gi|284033026|ref|YP_003382957.1| extracellular solute-binding protein family 3 protein [Kribbella flavida DSM 17836] gi|283812319|gb|ADB34158.1| extracellular solute-binding protein family 3 [Kribbella flavida DSM 17836] Length = 290 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 85/254 (33%), Gaps = 18/254 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVKANGDW 56 + + + + + ++ + + G L+ G T V +G + Sbjct: 8 RRIAALGTAITLAVTLAACGSDDQTDASGPDLGLLQPGTLRIGTLTDAPPNVYV-KDGKF 66 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD D A+++ + P ++ + + Q D+ S + T R+ ++ Sbjct: 67 TGFDNDLITAVAAKLNLKPE---FVGTDFSALLSQVNGGQYDLGSSSITVTEARKKTVA- 122 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F F G K GISS QL+G + V GT + + +P+ Sbjct: 123 -FSNGYDFGYLGLNTTKTSGISSFDQLTGKRVVVVQGTVQDDYATE------KNLNPVRV 175 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 +A DA+ + + + ++ P+A A+ + + + Sbjct: 176 PNYNAALGQLKAGTADAWVSPAEIGEKMAKEQGGGTVILAAKELSEA-PMAFAVAKSNDK 234 Query: 237 WYNIVSWTHYAMVT 250 V+ ++ Sbjct: 235 LREAVNKALDEVIA 248 >gi|262282087|ref|ZP_06059856.1| ABC transporter [Streptococcus sp. 2_1_36FAA] gi|262262541|gb|EEY81238.1| ABC transporter [Streptococcus sp. 2_1_36FAA] Length = 279 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 80/253 (31%), Gaps = 15/253 (5%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNASILGDIK---KRGFLKCGINTGLVGFAEVKAN 53 M K +++ + + S + S K K+ ++ F+ + Sbjct: 1 MKKLVKYSALLALTFAAVGTLAACSASNSKSESGKSDEKKVTVEIATVGTTRPFSYDDED 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G G++++ R + D +I + F L S + I + N +E + Sbjct: 61 GKLTGYEIEVLREVFK--GSDKYEINFNKTKWTSVFAGLDSDRFQIGANNIS--YSKERA 116 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + ++ K I S+ + G S V GT+T L DY K H K Sbjct: 117 GKYLYGNPYAKNPTVLVVRKGTDIKSLDDIGGKSTEVVQGTSTAKQLEDYNKEHPKKETK 176 Query: 174 IVFER--VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AI 230 I + +++I R D + + ++ + P Sbjct: 177 INYTDGTIQQILVNLNEGRADYKIFER-ISVDTIIKEQNLENLEVIELPSDQQPYVYPLF 235 Query: 231 IQGDTEWYNIVSW 243 QG E V Sbjct: 236 AQGQEELKTFVDK 248 >gi|224824128|ref|ZP_03697236.1| cationic amino acid ABC transporter, periplasmic binding protein [Lutiella nitroferrum 2002] gi|224603547|gb|EEG09722.1| cationic amino acid ABC transporter, periplasmic binding protein [Lutiella nitroferrum 2002] Length = 255 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 84/251 (33%), Gaps = 24/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + I+L + A K ++ G+N F +G GFD Sbjct: 1 MRK-----LALAIMLACAASGAMA------KDWKVIRFGVNPSYAPFESKATDGKLVGFD 49 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + ++ ++ AL++K+ D + + T R +AF Sbjct: 50 IDLGNAICDKL---KARCVWVENAWDGIIPALKAKKFDAILSSMAVTEKR--LEQVAFTD 104 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + K G + L G I V+ G+T E Y++ + + ++ Sbjct: 105 KIYNVPPRLVARKDAGFQPTAEALKGKRIGVEQGSTAETYAKTYWEPKGVA--VMSYQNQ 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + + A R DA L + ++ S A + + D Sbjct: 163 DLVYQDLTAGRLDAAFQSSVQAELGFLKSSAGHGFAFAGAGVTDSKTLGVGAAIGLRKED 222 Query: 235 TEWYNIVSWTH 245 T+ +++ Sbjct: 223 TDLAKLINTAL 233 >gi|167571743|ref|ZP_02364617.1| lysine-arginine-ornithine-binding periplasmic protein [Burkholderia oklahomensis C6786] Length = 264 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 20/252 (7%) Query: 1 MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + +++ C + + S + A + L+ G+ F A G+ +GF Sbjct: 1 MKRLQICLALACALGVVTGSGAARA------EAAQTLRFGLEAQYPPFESKAATGELQGF 54 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D A+ +++ + ALQ ++ D ++ + T R + F Sbjct: 55 DIDVGNAVCKEA---KLSCKWIETSFDGLIPALQGRKFDAINSAMNATDQR--RQAIDFT 109 Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + Y I G + + L G I V G+ E ++ + ++ Sbjct: 110 TVIYRVPTQLIARADSGLLPTPESLKGKRIGVLQGSIQEAYANAHWA--GAGVRVVAYQD 167 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQG 233 + A A R D A L+ + + +A + +G Sbjct: 168 QNQAYADLTAGRLDGTLVLAPAGQRGFLSRPDAKGFAFVGQPVRDDKILGSGIAFGLRKG 227 Query: 234 DTEWYNIVSWTH 245 D ++ Sbjct: 228 DDALKTRLNAAI 239 >gi|149909993|ref|ZP_01898642.1| subunit of the lysine/arginine/ornithine transporter (ABCsuperfamily) [Moritella sp. PE36] gi|149807007|gb|EDM66966.1| subunit of the lysine/arginine/ornithine transporter (ABCsuperfamily) [Moritella sp. PE36] Length = 253 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 29/248 (11%), Positives = 75/248 (30%), Gaps = 21/248 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ +L ++ ++ G+++ F +G+ GF+ Sbjct: 1 MKK--LACVIATSLLLSSAVVAKEWT--------DVRLGVDSPYKPFEYKTPDGELTGFE 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + ++ + L S++ D + + T R+ + F Sbjct: 51 IDLGNEVCKRANWN---CTWVVQSWDGIIPGLLSRKYDAIFSSMSITDARKK--KVLFSE 105 Query: 121 ITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + ++ + I VQ GT + + + + ++N + Sbjct: 106 PYYNTPSAWFAAADFKLDVADKAAFKKLRIGVQRGTVQDTHVTENYASNN---KIKRYNT 162 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEW 237 ++ R D D L ++ + + D + A+ + D Sbjct: 163 SGDLLLDLEGGRLDMVLLDFPVGDTTLLIPEKKGAYAAVGDTFQLGEGMGVAMRKRDKSL 222 Query: 238 YNIVSWTH 245 + Sbjct: 223 AATFNKVL 230 >gi|153814548|ref|ZP_01967216.1| hypothetical protein RUMTOR_00762 [Ruminococcus torques ATCC 27756] gi|317500590|ref|ZP_07958811.1| hypothetical protein HMPREF1026_00754 [Lachnospiraceae bacterium 8_1_57FAA] gi|331089309|ref|ZP_08338210.1| hypothetical protein HMPREF1025_01793 [Lachnospiraceae bacterium 3_1_46FAA] gi|145848042|gb|EDK24960.1| hypothetical protein RUMTOR_00762 [Ruminococcus torques ATCC 27756] gi|316898023|gb|EFV20073.1| hypothetical protein HMPREF1026_00754 [Lachnospiraceae bacterium 8_1_57FAA] gi|330405490|gb|EGG85022.1| hypothetical protein HMPREF1025_01793 [Lachnospiraceae bacterium 3_1_46FAA] Length = 271 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 85/251 (33%), Gaps = 29/251 (11%) Query: 1 MYKDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGLVG 46 M + +LC ++ + + S L +K++G L GI T Sbjct: 1 MKRRVLSVLLCAGLVVSVLAGCGSDDAKKDSGKKAASESDLDYVKEKGTLVVGI-TNFEP 59 Query: 47 FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106 G+W GFD D +A ++ D ++++ ++ + L L K ID + Sbjct: 60 MDYQDEEGEWIGFDADMAKAFGESLGVD---VEFVEIDWDNKILELDGKTIDCVWNGMTL 116 Query: 107 TLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYF 164 T E++ + + Q ++ K LS S V++G+ E D Sbjct: 117 TE--EVTSSMECTDAYLNNAQVVVLPADKADKYQDEKSLSDLSFAVESGSAGE----DEV 170 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 + + + P+ + + A DA D+ A+ ++ + + Sbjct: 171 ENRGLDFTPVTAQ--ADALMEVAAGTSDAAVIDLLMATAMIGEGTNYADLAYTVRLSEEE 228 Query: 225 PLAPAIIQGDT 235 +G Sbjct: 229 -YGVGFRKGSD 238 >gi|94988748|ref|YP_596849.1| glutamine transport system permease protein [Streptococcus pyogenes MGAS9429] gi|94992573|ref|YP_600672.1| glutamine-binding protein / glutamine transport system permease protein glnP [Streptococcus pyogenes MGAS2096] gi|94542256|gb|ABF32305.1| glutamine-binding protein [Streptococcus pyogenes MGAS9429] gi|94546081|gb|ABF36128.1| Glutamine-binding protein / Glutamine transport system permease protein glnP [Streptococcus pyogenes MGAS2096] Length = 724 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 97/293 (33%), Gaps = 38/293 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V +L ++ +F T +A + + +T F ++ +KG D Sbjct: 1 MTHKIKVLLLAIMSIFLTCNIASAETIAIV---------SDTAYAPFEFKDSDQIYKGID 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ D + + +A A+QS Q L T T R+ F Sbjct: 52 VDIINEVAKRQSWD-FSMSFPGFDAAVN--AVQSGQASALMAGTTITNARKKV--FHFSE 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K I S L G ++ V+ GT + L +Y Y F+ + Sbjct: 107 PYYDTKIVIATRKANAIKKYSDLKGKTVGVKNGTAAQAFLNNY--KKKYDYTVKTFDTGD 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP--AIIQGDTEWY 238 + + A A D + + N + + P+ ++ + + Sbjct: 165 LMYNSLSAGSIAAVMDDEAVIQYAISQNQD------IAINMKGEPIGSFGFAVKKGSGYD 218 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290 +V+ + A + + D T + ++LG D + +A G Sbjct: 219 YLVNDFNTA-------------LKAMKADGTYQAIMTKWLGTDDKATTSQATG 258 Score = 94.4 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 79/256 (30%), Gaps = 16/256 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + S A+ IK + ++ F G + G D Sbjct: 241 MTKWLGTDDKATTSQATGNPSAKAT---PIKDSYKIV--SDSSFAPFEFQNGKGKYVGID 295 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ +A++ KI+ A+QS Q D + T R+ F Sbjct: 296 IELIKAIAKQ---QGFKIEIANPGFDAALNAVQSSQADGVIAGATITDARKAI--FDFSD 350 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + K I + L ++ + GT++ L + + + F+ Sbjct: 351 PYYTSNIILAVKAGKNIKNYEDLDRKTVGAKNGTSSYSWLKENAPKYGY--NVKAFDDGS 408 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYN 239 + + + DA D LK + + IS + A+ + + E Sbjct: 409 SMYDSLNSGSVDAIMDDE---AVLKYAISQGRRFETPLEGISTGEVGFAVKKGTNPELIE 465 Query: 240 IVSWTHYAMVTAEELG 255 + + A+ + + Sbjct: 466 MFNNGLAALKKSGQYD 481 >gi|71903722|ref|YP_280525.1| transporter [Streptococcus pyogenes MGAS6180] gi|71802817|gb|AAX72170.1| transporter [Streptococcus pyogenes MGAS6180] Length = 724 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 97/293 (33%), Gaps = 38/293 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V +L ++ +F T +A + + +T F ++ +KG D Sbjct: 1 MTHKIKVLLLAIMSIFLTCNIASAETIAIV---------SDTAYAPFEFKDSDQIYKGID 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ D + + +A A+QS Q L T T R+ F Sbjct: 52 VDIINEVAKRQSWD-FSMSFPGFDAAVN--AVQSGQASALMAGTTITNARKKV--FHFSE 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K I S L G ++ V+ GT + L +Y Y F+ + Sbjct: 107 PYYDTKIVIATRKANAIKKYSDLKGKTVGVKNGTAAQAFLNNY--KKKYDYTVKTFDTGD 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP--AIIQGDTEWY 238 + + A A D + + N + + P+ ++ + + Sbjct: 165 LMYNSLSAGSIAAVMDDEAVIQYAISQNQD------IAINMKGEPIGSFGFAVKKGSGYD 218 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290 +V+ + A + + D T + ++LG D + +A G Sbjct: 219 YLVNDFNTA-------------LKAMKADGTYQAIMTKWLGTDDKATTSQATG 258 Score = 94.4 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 79/256 (30%), Gaps = 16/256 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + S A+ IK + ++ F G + G D Sbjct: 241 MTKWLGTDDKATTSQATGNPSAKAT---PIKDSYKIV--SDSSFAPFEFQNGKGKYVGID 295 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ +A++ KI+ A+QS Q D + T R+ F Sbjct: 296 IELIKAIAKQ---QGFKIEIANPGFDAALNAVQSSQADGVIAGATITDARKAI--FDFSD 350 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + K I + L ++ + GT++ L + + + F+ Sbjct: 351 PYYTSNIILAVKAGKNIKNYEDLDRKTVGAKNGTSSYSWLKENAPKYGY--NVKAFDDGS 408 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYN 239 + + + DA D LK + + IS + A+ + + E Sbjct: 409 SMYDSLNSGSVDAIMDDE---AVLKYAISQGRRFETPLEGISTGEVGFAVKKGTNPELIE 465 Query: 240 IVSWTHYAMVTAEELG 255 + + A+ + + Sbjct: 466 MFNNGLAALKKSGQYD 481 >gi|304393288|ref|ZP_07375216.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Ahrensia sp. R2A130] gi|303294295|gb|EFL88667.1| histidine ABC transporter, periplasmic histidine-binding protein HisJ [Ahrensia sp. R2A130] Length = 255 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 48/215 (22%), Positives = 82/215 (38%), Gaps = 13/215 (6%) Query: 35 FLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 L+ G+++ F A G+WKGF+++ AL A+ + ++P+ AL Sbjct: 24 ELRLGLDSAPYEPFYARTAGGEWKGFEIEVGEALCKAM---NEECVWVPIAWDGIIPALT 80 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 S +ID + + T R + F Y I K I S+ L G ++ VQ Sbjct: 81 SNKIDAIVASMSITEER--MKTIDFSNKYYNTPAALIAPKASEIKSLDDLKGKTVGVQVS 138 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT A++ +A ++ E + A R DA D AL + + Sbjct: 139 TTH----ANFAEAKIPGATVKTYQDFNEHNQDLFAGRVDAIVADSLALEPFLKSKEGEGM 194 Query: 214 HVIL---PDIISKSPLAPAIIQGDTEWYNIVSWTH 245 V L + I + + + DTE + + Sbjct: 195 EVKLTLKDEAIFGLGVGAGVRKADTELKDKFNKAI 229 >gi|330809876|ref|YP_004354338.1| putative amino acid ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377984|gb|AEA69334.1| putative amino acid ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 241 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 85/224 (37%), Gaps = 15/224 (6%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ L+ G++ F A+G KGFD+D A+ + + K ++ + Sbjct: 4 KEYSTLRFGVDANYAPFESKAADGSLKGFDIDLGNAICAKL---SVKCIWVESDFDGLIP 60 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149 L++ + D + + T RE + F + ++ K G+S V+ L G ++ Sbjct: 61 GLRAGKFDGILSSMTVTATREK--AIDFSNELFSGFTSYVFKKGSGLSADVASLKGKTVG 118 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 G+ E ++ +++ A R DA D + + Sbjct: 119 YFQGSIQEAYAKAVLDKAG--VKIQSYQNQDQVYYDLVAGRLDASLQDTLQAQMGFIKSA 176 Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAM 248 + +++ + P + S P A I +G+TE ++ A+ Sbjct: 177 QGTDYEMSPPVES--PYLPSKTAIGIAKGNTELKALLDKAIQAL 218 >gi|71910889|ref|YP_282439.1| transporter [Streptococcus pyogenes MGAS5005] gi|71853671|gb|AAZ51694.1| transporter [Streptococcus pyogenes MGAS5005] Length = 724 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 97/293 (33%), Gaps = 38/293 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V +L ++ +F T +A + + +T F ++ +KG D Sbjct: 1 MTHKIKVLLLAIMSIFLTCNIASAETIAIV---------SDTAYAPFEFKDSDQIYKGID 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ D + + +A A+QS Q L T T R+ F Sbjct: 52 VDIINEVAKRQSWD-FSMSFPGFDAAVN--AVQSGQASALMAGTTITNARKKV--FHFSE 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K I S L G ++ V+ GT + L +Y Y F+ + Sbjct: 107 PYYDTKIVIATRKANAIKKYSDLKGKTVGVKNGTAAQAFLNNY--KKKYDYTVKTFDTGD 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP--AIIQGDTEWY 238 + + A A D + + N + + P+ ++ + + Sbjct: 165 LMYNSLSAGSIAAVMDDEAVIQYAISQNQD------IAINMKGEPIGSFGFAVKKGSGYD 218 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290 +V+ + A + + D T + ++LG D + +A G Sbjct: 219 YLVNDFNTA-------------LKAMKADGTYQAIMTKWLGTDDKATTSQATG 258 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 37/241 (15%), Positives = 76/241 (31%), Gaps = 11/241 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 TS +T + K ++ F G + G D++ +A++ Sbjct: 251 ATTSQATGNPSAKATPTKDSYKIVSDSSFAPFEFQNGKGKYVGIDIELIKAIAKQ---QG 307 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 KI+ A+QS Q D + T R+ F Y + K Sbjct: 308 FKIEIANPGFDAALNAVQSSQADGVIAGATITDARKAI--FDFSDPYYTSNIILAVKAGK 365 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I + L ++ + GT++ L + + + F+ + + + DA Sbjct: 366 NIKNYEDLDRKTVGAKNGTSSYSWLKENAPKYGY--NVKAFDDGSSMYDSLNSGSVDAIM 423 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254 D LK + + IS + A+ + + E + + A+ + + Sbjct: 424 DDE---AVLKYAISQGRRFETPLEGISTGEVGFAVKKGTNPELIEMFNNGLAALKKSGQY 480 Query: 255 G 255 Sbjct: 481 D 481 >gi|325522764|gb|EGD01250.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. TJI49] Length = 259 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 80/220 (36%), Gaps = 13/220 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ GI F G +GFDVD A+ + + K ++ + ALQ+ Sbjct: 26 TLRFGIEAAYPPFESKTPAGQLQGFDVDIGNAVCAKL---NMKCAWVENSFDGLIPALQA 82 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153 ++ D ++ + T R+ + F P Y + + + V+ L G + V G Sbjct: 83 RKFDAINSAMNITAKRK--QSIDFTPAIYVVPIVMVAKRGSPLRPDVASLRGKHVGVLQG 140 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 ++ E L ++ + + ++ ++I A A R DA + L + Sbjct: 141 SSQEDFLKAHWANAGVA--VVSYQDQDQIYADLVAGRLDAAVQEAQTAQDGFLDKPAGRD 198 Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248 + I+ D + + +GD + A+ Sbjct: 199 YQIVGDPLKDPATLGEGTGFGMRKGDKALQAKIVGALDAL 238 >gi|304411004|ref|ZP_07392620.1| extracellular solute-binding protein family 3 [Shewanella baltica OS183] gi|307301873|ref|ZP_07581631.1| extracellular solute-binding protein family 3 [Shewanella baltica BA175] gi|304350539|gb|EFM14941.1| extracellular solute-binding protein family 3 [Shewanella baltica OS183] gi|306913911|gb|EFN44332.1| extracellular solute-binding protein family 3 [Shewanella baltica BA175] Length = 244 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 71/224 (31%), Gaps = 16/224 (7%) Query: 31 KKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 K L G N F V + KGFD+D + ++ ++ + Sbjct: 23 KSDDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIDLAKQIAKDAGK---TLKVENMKFDSL 79 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 +AL S +ID ++ T R+ ++ + P + I+++ + G Sbjct: 80 IVALNSGKIDFIASGMTITAERQANVNFS-EPYYEATQVVLVNKDNNSINTLEDIKGKHF 138 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 VQ GTT + + + F E + + D D N Sbjct: 139 AVQLGTTAD------IMSKKYTQNITAFNTGFEAIMELKNSKVDLVLFDSEPAANYLAKN 192 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 E ++ A+ + E ++ T A + A+ Sbjct: 193 P---ELKMIKLDFPAEFYGFAVSKEQPELLASINKTL-ANMKAD 232 >gi|15675263|ref|NP_269437.1| hypothetical protein SPy_1315 [Streptococcus pyogenes M1 GAS] gi|13622436|gb|AAK34158.1| hypothetical protein SPy_1315 [Streptococcus pyogenes M1 GAS] Length = 724 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 97/293 (33%), Gaps = 38/293 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V +L ++ +F T +A + + +T F ++ +KG D Sbjct: 1 MTHKIKVLLLAIMSIFLTCNIASAETIAIV---------SDTAYAPFEFKDSDQIYKGID 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ D + + +A A+QS Q L T T R+ F Sbjct: 52 VDIINEVAKRQSWD-FSMSFPGFDAAVN--AVQSGQASALMAGTTITNARKKV--FHFSE 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K I S L G ++ V+ GT + L +Y Y F+ + Sbjct: 107 PYYDTKIVIATRKANAIKKYSDLKGKTVGVKNGTAAQAFLNNY--KKKYDYTVKTFDTGD 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP--AIIQGDTEWY 238 + + A A D + + N + + P+ ++ + + Sbjct: 165 LMYNSLSAGSIAAVMDDEAVIQYAISQNQD------IAINMKGEPIGSFGFAVKKGSGYD 218 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290 +V+ + A + + D T + ++LG D + +A G Sbjct: 219 YLVNDFNTA-------------LKAMKADGTYQAIMTKWLGTDDKATTSQATG 258 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 37/241 (15%), Positives = 76/241 (31%), Gaps = 11/241 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 TS +T + K ++ F G + G D++ +A++ Sbjct: 251 ATTSQATGNPSAKATPTKDSYKIVSDSSFAPFEFQNGKGKYVGIDIELIKAIAKQ---QG 307 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 KI+ A+QS Q D + T R+ F Y + K Sbjct: 308 FKIEIANPGFDAALNAVQSSQADGVIAGATITDARKAI--FDFSDPYYTSNIILAVKAGK 365 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I + L ++ + GT++ L + + + F+ + + + DA Sbjct: 366 NIKNYEDLDRKTVGAKNGTSSYSWLKENAPKYGY--NVKAFDDGSSMYDSLNSGSVDAIM 423 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEEL 254 D LK + + IS + A+ + + E + + A+ + + Sbjct: 424 DDE---AVLKYAISQGRRFETPLEGISTGEVGFAVKKGTNPELIEMFNNGLAALKKSGQY 480 Query: 255 G 255 Sbjct: 481 D 481 >gi|302336265|ref|YP_003801472.1| amino acid ABC transporter substrate-binding protein, PAAT family [Olsenella uli DSM 7084] gi|301320105|gb|ADK68592.1| amino acid ABC transporter substrate-binding protein, PAAT family [Olsenella uli DSM 7084] Length = 323 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 90/253 (35%), Gaps = 16/253 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFC 64 F ++L + + + +S IK G + G FA++ +G +GFD Sbjct: 56 FDALLAAGAVADDASVSASSWAKRIKDAGSFRLGGVQTSTLFAQLDETDGKLRGFDAGLA 115 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + L I D SK + + + R LQ+ Q+D + T R+ ++F Y Sbjct: 116 QLLVRYILGDESKYDFTQVTSSTRESVLQNDQVDAVFATYSITDDRKK--AISFAGPYYT 173 Query: 125 DGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 QG ++ I+SV L+ ++ VQ+G+T +A+ F EE Sbjct: 174 SQQGILVAASNSDINSVDDLADKNVAVQSGSTGPQIVAELAPKA----VTQEFTTDEEAR 229 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPAIIQGDTEWYNIVS 242 A R DAY D L P ++ + + + + Sbjct: 230 TALEQGRVDAYVID--VTMQLSSIAKNPGKYRLAGEAFGPTDAYGIGLPLDSDGVAFV-- 285 Query: 243 WTHYAMVTAEELG 255 A + A E Sbjct: 286 ---NAWLKAIEDD 295 >gi|146318672|ref|YP_001198384.1| putative amino acid transporter, amino acid-binding protein [Streptococcus suis 05ZYH33] gi|145689478|gb|ABP89984.1| putative amino acid transporter, amino acid-binding protein [Streptococcus suis 05ZYH33] Length = 251 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 80/239 (33%), Gaps = 14/239 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWKGFDVDFCRALSSAIFDDPSKI 78 + L +++++G + +N F G D++ +A+ + + + Sbjct: 8 QEDTSLKEVQEKGKIIVALNPEFPPFEFRTLVDGKDTIVGADIELAKAIGQELGVE---V 64 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--G 136 ++ ++ +QS Q DI T R F Y I++K+ Sbjct: 65 EFSAMSFDNVLNNVQSGQSDIAISGISATEERAKV--YDFSIPYYTSTNKVIINKEDLAQ 122 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 +S+ L+ A+I Q G+ E + + + I E+ ++ + +A Sbjct: 123 YTSLDSLAEANIGAQKGSIQEQIIKEQLPS----STVIALASNGELINQLKSQKVEAVIF 178 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + A ND A A+ +G T V +V + ++ Sbjct: 179 EEPIAKAYVAKNDDLVILDTEIKSSYSDAYAIALPKGSTALKEKVDSVITKLVESGQMD 237 >gi|94994565|ref|YP_602663.1| Glutamine-binding protein / Glutamine transport system permease protein glnP [Streptococcus pyogenes MGAS10750] gi|306827161|ref|ZP_07460451.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pyogenes ATCC 10782] gi|94548073|gb|ABF38119.1| Glutamine-binding protein / Glutamine transport system permease protein glnP [Streptococcus pyogenes MGAS10750] gi|304430617|gb|EFM33636.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pyogenes ATCC 10782] Length = 724 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 97/293 (33%), Gaps = 38/293 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V +L ++ +F T +A + + +T F ++ +KG D Sbjct: 1 MTHKIKVLLLAIMSIFLTCNIASAETIAIV---------SDTAYAPFEFKDSDQIYKGID 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ D + + +A A+QS Q L T T R+ F Sbjct: 52 VDIINEVAKRQSWD-FSMSFPGFDAAVN--AVQSGQASALMAGTTITNARKKV--FHFSE 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K I S L G ++ V+ GT + L +Y Y F+ + Sbjct: 107 PYYDTKIVIATRKANAIKKYSDLKGKTVGVKNGTAAQAFLNNY--KKKYDYTVKTFDTGD 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP--AIIQGDTEWY 238 + + A A D + + N + + P+ ++ + + Sbjct: 165 LMYNSLSAGSIAAVMDDEAVIQYAISQNQD------IAINMKGEPIGSFGFAVKKGSGYD 218 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290 +V+ + A + + D T + ++LG D + +A G Sbjct: 219 YLVNDFNTA-------------LKAMKADGTYQAIMTKWLGTDDKATTSQATG 258 Score = 94.4 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 79/256 (30%), Gaps = 16/256 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + S A+ IK + ++ F G + G D Sbjct: 241 MTKWLGTDDKATTSQATGNPSAKAT---PIKDSYKIV--SDSSFAPFEFQNGKGKYVGID 295 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ +A++ KI+ A+QS Q D + T R+ F Sbjct: 296 IELIKAIAKQ---QGFKIEIANPGFDAALNAVQSSQADGVIAGATITDARKAI--FDFSD 350 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + K I + L ++ + GT++ L + + + F+ Sbjct: 351 PYYTSNIILAVKAGKNIKNYEDLDRKTVGAKNGTSSYSWLKENAPKYGY--NVKAFDDGS 408 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYN 239 + + + DA D LK + + IS + A+ + + E Sbjct: 409 SMYDSLNSGSVDAIMDDE---AVLKYAISQGRRFETPLEGISTGEVGFAVKKGTNPELIE 465 Query: 240 IVSWTHYAMVTAEELG 255 + + A+ + + Sbjct: 466 MFNNGLAALKKSGQYD 481 >gi|16079990|ref|NP_390816.1| sulfur containing amino acid ABC transporter binding lipoprotein [Bacillus subtilis subsp. subtilis str. 168] gi|221310882|ref|ZP_03592729.1| hypothetical protein Bsubs1_16036 [Bacillus subtilis subsp. subtilis str. 168] gi|221315207|ref|ZP_03597012.1| hypothetical protein BsubsN3_15932 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320125|ref|ZP_03601419.1| hypothetical protein BsubsJ_15848 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324407|ref|ZP_03605701.1| hypothetical protein BsubsS_16007 [Bacillus subtilis subsp. subtilis str. SMY] gi|81637560|sp|O34406|TCYJ_BACSU RecName: Full=L-cystine-binding protein tcyJ; Flags: Precursor gi|2293247|gb|AAC00325.1| putative glutamine-binding protein [Bacillus subtilis] gi|2635403|emb|CAB14898.1| sulfur containing amino acid ABC transporter binding lipoprotein [Bacillus subtilis subsp. subtilis str. 168] Length = 269 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 67/200 (33%), Gaps = 5/200 (2%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + V +L + L S + ++ + G T A + G+ G+D+ Sbjct: 3 KRKGLVLLLSVFALLGGGCSQTNNKTD--RQAQTVIVGTGTDFPNIAFLNEKGELTGYDI 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + +A+ + ++ ++ +L +K+ID+++ N RE P Sbjct: 61 EVMKAIDKEL--PQYTFEFKTMDFSNLLTSLGNKKIDVIAHNMAKNKEREKRFLYHKVPY 118 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-VE 180 Y + I ++ L G ++ V A + + Y K H H + Sbjct: 119 NYSPMYITVKEDNHKIHTLKDLHGKTVIVGATSNAADYITKYNKTHGSPIHLKYAGQGSN 178 Query: 181 EIDAAYRAHRCDAYTGDISA 200 + R DA A Sbjct: 179 DTANQIETGRADATIATPFA 198 >gi|319942018|ref|ZP_08016337.1| glutamine ABC transporter [Sutterella wadsworthensis 3_1_45B] gi|319804402|gb|EFW01280.1| glutamine ABC transporter [Sutterella wadsworthensis 3_1_45B] Length = 265 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 87/258 (33%), Gaps = 15/258 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKAN-GDWK 57 M+K + + T A+ L G++ F + G++ Sbjct: 1 MHKRRLIQFALAGLAGLTIHPLAAAAASQAADEDLPLLVAGMDAAYPPFGFKDSKTGEFV 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD RA+ +++ + AL+++ IDI + T R + Sbjct: 61 GFDVDIIRAIGRTAG---FRVKVENIPFDGLIPALKTRTIDIAINDIGITAERAK--SVD 115 Query: 118 FRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y G G ++ K +GI S L G + V G+T E+ A VF Sbjct: 116 FSDRYYIAGMGIVVAKGYQGIQSAKDLEGKRLAVTIGSTGEIAAKRIPHA-----QVRVF 170 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + + DA DI + L ++ L A+ +G + Sbjct: 171 NTLSDCFLELINNGVDAVLNDIPTN-DYYAVTAGAGKVDSLSISLAAEDLGIAVKKGRKD 229 Query: 237 WYNIVSWTHYAMVTAEEL 254 ++ ++ + E Sbjct: 230 LLEKINKGLASLKASGEF 247 >gi|226360127|ref|YP_002777905.1| amino acid ABC transporter amino acid-binding protein [Rhodococcus opacus B4] gi|226238612|dbj|BAH48960.1| putative amino acid ABC transporter amino acid-binding protein [Rhodococcus opacus B4] Length = 309 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 75/245 (30%), Gaps = 16/245 (6%) Query: 22 TNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 A+ L I G + G+N +G GFDVD A+ + P Y Sbjct: 57 AIAATLPEKIASSGKIIVGVNIPYSPNEFKDPSGKIVGFDVDLVDAVGKVLGVTPE---Y 113 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + ++Q+ D+ + T RE + F + G + K + Sbjct: 114 TEADFDKIIPSIQAGSYDMGMSSFTDTKERE--QSVDFT-TYFSAGVQWAQPAGKSV-DP 169 Query: 141 SQLSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + G + VQ T + A A + F+ ++ A + DA + Sbjct: 170 TNACGLRVGVQTTTIEDLEEVPAKSAACVAAGKPPIEIVKFDSQDDAANAVALGKVDAMS 229 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D +D E ++ +P + +G + ++ Sbjct: 230 ADSPVTAYAIKQSDGKIE--AAGEVFDAAPYGWPVAKGSP-LAQTLQQALQHLIDDGTYR 286 Query: 256 ITQKN 260 +N Sbjct: 287 TIAEN 291 >gi|310659738|ref|YP_003937459.1| cystine ABC transporter periplasmic-binding protein [Clostridium sticklandii DSM 519] gi|308826516|emb|CBH22554.1| cystine transporter subunit ; periplasmic-binding component of ABC superfamily [Clostridium sticklandii] Length = 269 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 86/248 (34%), Gaps = 10/248 (4%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + + L + F S +S + + +K G++ + + G+ GFDVD Sbjct: 9 IIILIAVALGSIMFFSTKDKSSTASEPAE--VIKVGMSGSYKPYTYLDEKGELTGFDVDV 66 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + + + I+++ + F L S ++D ++ T RE F Sbjct: 67 WKEIGKRTGHE---IEFVTSDFSGLFGMLDSAKLDTIANQITVTPERE--QKYLFTRPYV 121 Query: 124 FDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + G I + I + L G + V GT E + ++ K N + I ++ Sbjct: 122 YYGAQLISKDDRNDIIDLESLKGKKVAVGLGTNYETIIREFDK--NSEIEIITYDSGSGS 179 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R DA D AL ++ + P + P ++ + + E + Sbjct: 180 YQDVAIGRVDAAMNDRLALQSVINESGLPLKLAGPPINEMQNAFPFLNNEENKELVAQID 239 Query: 243 WTHYAMVT 250 +M Sbjct: 240 SAIDSMYE 247 >gi|227877868|ref|ZP_03995884.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256844269|ref|ZP_05549755.1| glutamine ABC transporter permease [Lactobacillus crispatus 125-2-CHN] gi|262047651|ref|ZP_06020605.1| glutamine ABC transporter permease [Lactobacillus crispatus MV-3A-US] gi|293380559|ref|ZP_06626618.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] gi|295691987|ref|YP_003600597.1| amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus crispatus ST1] gi|312976974|ref|ZP_07788723.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Lactobacillus crispatus CTV-05] gi|227862530|gb|EEJ70033.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256613347|gb|EEU18550.1| glutamine ABC transporter permease [Lactobacillus crispatus 125-2-CHN] gi|260572051|gb|EEX28617.1| glutamine ABC transporter permease [Lactobacillus crispatus MV-3A-US] gi|290922873|gb|EFD99816.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] gi|295030093|emb|CBL49572.1| Amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus crispatus ST1] gi|310896302|gb|EFQ45367.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Lactobacillus crispatus CTV-05] Length = 494 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 39/265 (14%), Positives = 85/265 (32%), Gaps = 29/265 (10%) Query: 1 MYK-----DFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGF 47 M K F I L LF + NA S++ IK+ L G + Sbjct: 1 MKKAKIIKTFLAFITMLSTLFLFNQPVNAANKEVETGSVMKKIKQSKELVVGTSADYPPL 60 Query: 48 AEV---KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 N + G D++ + ++ + +K+ ++ +AL++ ++D++ Sbjct: 61 EFTTSENGNTKYVGVDIELAKDIAKDL---HAKLVIKNMSFDSLLVALETGKVDMVISAM 117 Query: 105 DWTLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 R+ + F I Y + + +G ++ Q G+ + Sbjct: 118 TPNPERKK--SVDFSKIYYKPSGEYFLINKRDQAKYKKIKDFAGKTVGAQTGSIQYSLIQ 175 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 K + ++ + A ++++ + ND V Sbjct: 176 KQMK----QSKVKGLGKINNLVLALKSNKISGIVMEEM-TAKAYQQNDNSLMAVRSDLRE 230 Query: 222 SKSPLAPAIIQGDTEWYNIVSWTHY 246 ++ A AI +G + V+ T Sbjct: 231 QQAGNAVAIAKGQNDLVAAVNKTIN 255 >gi|308069275|ref|YP_003870880.1| Probable amino-acid ABC transporter extracellular binding protein yqiX precursor [Paenibacillus polymyxa E681] gi|305858554|gb|ADM70342.1| Probable amino-acid ABC transporter extracellular binding protein yqiX precursor [Paenibacillus polymyxa E681] Length = 487 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 86/252 (34%), Gaps = 19/252 (7%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55 M K F +L +IL T + + K + L G++ + + Sbjct: 1 MKKAYRFTALVLTAVILLLTGLPMLNAYGTEAKPQKKLVVGMSADFPPYEFHKVINGKDT 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDV+ + ++ + D + ++ ALQS ++D++ T R Sbjct: 61 IVGFDVEIAKEIAKDL--DAEMVP-EDMSFDSLLPALQSGRVDLVLSGMTPTDERRK--S 115 Query: 116 LAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + Y Q ++ K ++ L G I Q G+ E A Sbjct: 116 IDFSDVYYRSKQVIMVRPEDKDKYPTMDALKGEKIGAQKGSIQEEIAQKVPNA-----SV 170 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +++ ++ R R +A + + + + +P+ A I +G Sbjct: 171 TSLDKISDLVLQLRTQRVNAVVIEDTVAKGY-TLDGTVTLAKAVPEDAGAE-TAVGIRKG 228 Query: 234 DTEWYNIVSWTH 245 + E V+ T Sbjct: 229 NAELLASVNKTL 240 >gi|19746296|ref|NP_607432.1| hypothetical protein spyM18_1327 [Streptococcus pyogenes MGAS8232] gi|19748486|gb|AAL97931.1| hypothetical protein spyM18_1327 [Streptococcus pyogenes MGAS8232] Length = 724 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 97/293 (33%), Gaps = 38/293 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V +L ++ +F T +A + + +T F ++ +KG D Sbjct: 1 MTHKIKVLLLAIMSIFLTCNIASAETIAIV---------SDTAYAPFEFKDSDQIYKGID 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ D + + +A A+QS Q L T T R+ F Sbjct: 52 VDIINEVAKRQSWD-FSMSFPGFDAAVN--AVQSGQASALMAGTTITNARKKV--FHFSE 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K I S L G ++ V+ GT + L +Y Y F+ + Sbjct: 107 PYYDTKIVIATRKANAIKKYSDLKGKTVGVKNGTAAQAFLNNY--KKKYDYTVKTFDTGD 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP--AIIQGDTEWY 238 + + A A D + + N + + P+ ++ + + Sbjct: 165 LMYNSLSAGSIAAVMDDEAVIQYAISQNQD------IAINMKGEPIGSFGFAVKKGSGYD 218 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290 +V+ + A + + D T + ++LG D + +A G Sbjct: 219 YLVNDFNTA-------------LKAMKADGTYQAIMTKWLGTDDKATTSQATG 258 Score = 94.0 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 78/256 (30%), Gaps = 16/256 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + S A+ IK + ++ F G + G D Sbjct: 241 MTKWLGTDDKATTSQATGNPSAKAT---PIKDSYKIV--SDSSFAPFEFQNGKGKYVGID 295 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ +A++ KI+ A+QS Q D + T R+ F Sbjct: 296 IELIKAIAKQ---QGFKIEIANPGFDAALNAVQSSQADGVIAGATITDARKAI--FDFSD 350 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + K I + L ++ + GT+ L + + + F+ Sbjct: 351 PYYTSNIILAVKAGKNIKNYEDLDRKTVGAKNGTSAYSWLKENAPKYGY--NVKAFDDGS 408 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYN 239 + + + DA D LK + + IS + A+ + + E Sbjct: 409 SMYDSLNSGSVDAIMDDE---AVLKYAISQGRRFETPLEGISTGEVGFAVKKGTNPELIE 465 Query: 240 IVSWTHYAMVTAEELG 255 + + A+ + + Sbjct: 466 MFNNGLAALKKSGQYD 481 >gi|115350778|ref|YP_772617.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115280766|gb|ABI86283.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 259 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 79/220 (35%), Gaps = 13/220 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ GI F G +GFDVD A+ + + K ++ ALQ+ Sbjct: 26 TLRFGIEAAYPPFESKSPAGQLQGFDVDIGNAVCAKL---NMKCVWVENAFDGLIPALQA 82 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153 ++ D ++ + T R+ + F P Y + H+ + + L G + V G Sbjct: 83 RKFDAINSAMNITAKRK--QSIDFTPAIYVVPIVMVAHRGSPLRPDAASLRGKHVGVLQG 140 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 ++ E L ++ + + + ++I A A R DA + L + Sbjct: 141 SSQEDFLKAHWANAGVA--VVSYPDQDQIYADLVAGRLDAAVQEAQTAQDGFLDKPAGRD 198 Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248 + I+ + + + +GD ++ A+ Sbjct: 199 YQIVGEPLKDPATLGEGTGFGMRKGDKALQTKIAGALDAL 238 >gi|319941854|ref|ZP_08016175.1| hypothetical protein HMPREF9464_01394 [Sutterella wadsworthensis 3_1_45B] gi|319804507|gb|EFW01377.1| hypothetical protein HMPREF9464_01394 [Sutterella wadsworthensis 3_1_45B] Length = 276 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 32/254 (12%), Positives = 73/254 (28%), Gaps = 22/254 (8%) Query: 2 YKDFFVSILCLII---------LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52 + + L + +F + S A L IKK G ++ G V ++ Sbjct: 11 RRTLLSAALGAVAFSAIGTPLTVFAAAESDPAQQLDRIKKAGVIRIGTEGVFVPYSYHDE 70 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G G+DV+ RA+++ I Q++ + + + + DI+ + + R Sbjct: 71 QGRLTGYDVELARAVAAKIGVQA---QFIESSWDSLLAGVDAGRFDIVVNQVEASAARRA 127 Query: 113 SLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F +D ++ I L G + + +AH Sbjct: 128 --KYDFSVPYTYDHTAILVRSDNNDIKGFDDLRGKRAAE----SATANSSRIAEAHG--A 179 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + + + R D ++ ++ + + Sbjct: 180 VIVGVQDFSQAVELVVSKRADTALNSELSIADFLRKMPD-VPVKVVATSTEAEEMCVLMP 238 Query: 232 QGDTEWYNIVSWTH 245 +G + Sbjct: 239 KGSQALKAAIDEAI 252 >gi|310642316|ref|YP_003947074.1| amino acid abc transporter, permease protein, his/glu/gln/arg/opine family [Paenibacillus polymyxa SC2] gi|309247266|gb|ADO56833.1| Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Paenibacillus polymyxa SC2] Length = 487 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 100/287 (34%), Gaps = 22/287 (7%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55 M K F +L +IL + + K + L G++ + + Sbjct: 1 MKKAYRFTALVLSAVILLLAGLPMLTAYGSEEKPQKKLVVGMSADFPPYEFHKVINGQDT 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFDV+ + ++ + + ++ ALQS ++D++ T R Sbjct: 61 IVGFDVEIAKEIAKDLNAEMVP---EDMSFDSLLPALQSGRVDLVLSGMTPTDERRK--S 115 Query: 116 LAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F + Y Q ++ K S+++ L G + Q G+ E A Sbjct: 116 IDFSDVYYRSKQVIMVRPEDKDKYSTMAALKGEKLGAQKGSIQEEIAQKVPNA-----SV 170 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +++ ++ R +R +A + + + + +P+ A I +G Sbjct: 171 TSLDKISDLVLQLRTNRINAVVIEDTVAKGY-TLDGTVTLAKAVPEDEGAE-TAVGIRKG 228 Query: 234 DTEWYNIVSWT---HYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 + E V+ T A + E+ ++ + ++N V FL Sbjct: 229 NAELLASVNKTLARLKADGSIEKFSTEASALSADRQVSSNSIVDIFL 275 >gi|300790865|ref|YP_003771156.1| ABC transporter substrate-binding protein [Amycolatopsis mediterranei U32] gi|299800379|gb|ADJ50754.1| ABC transport system substrate-binding protein [Amycolatopsis mediterranei U32] Length = 260 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 86/251 (34%), Gaps = 21/251 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L S +AS L+ G + + +G++ GFD Sbjct: 1 MKKLIVTVLAAALTLTACGGSDSASA--------TLRVGTLSDAPPNIYL-KDGNYTGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + +A+++ K+++ + + S + DI S T R+ + + F Sbjct: 52 NELLKAIAAK---QNLKLEFAATDFSALLGQVASGRYDIASSAIAQTDERKKT--VDFSA 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 F+ + ++ L+G + V T + L + + F Sbjct: 107 AYDFETMSIQAKQGTPVTDEKGLAGQRVAVIQATVGDHWLTSTVPSA----QAVRFPDYA 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYN 239 A ++ DAY D S A K D P +++ P A+ +G+ E Sbjct: 163 AALTALKSGAVDAYILDQSI--AEKNVADNPDAKLVVVKSFVTDVPHGFAVKKGNAELLG 220 Query: 240 IVSWTHYAMVT 250 + +++ Sbjct: 221 KIDSGLKQVIS 231 >gi|254473737|ref|ZP_05087132.1| cyclohexadienyl dehydratase [Pseudovibrio sp. JE062] gi|211957123|gb|EEA92328.1| cyclohexadienyl dehydratase [Pseudovibrio sp. JE062] Length = 272 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 87/246 (35%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M + F + + LF S S L +I G LK G + + +KG+ Sbjct: 15 MLRSFLTLLFAVGTLFSGSAFAQ-SALNEILDSGELKVGTTGDWNPMSVRDPASNGYKGY 73 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D L++ + + ++P + K + + + + L+ + + R G + Sbjct: 74 DIDIMNELATDLGVK---LTFVPTDWKTLVNGIVAGKYN-LTGSASISPSRMKVAGYSES 129 Query: 120 PITYFDGQGFIMHKKKGISSVS--QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 I+ +K + +S ++ GTT E ++F V E Sbjct: 130 YISVEILPFTTSNKVEQFNSWDSINQKDVTVATTLGTTFEKLSKEWFP----NATIKVVE 185 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + R D + LK + +V + + + +P+A + Q D W Sbjct: 186 APARGYQEVLSGRADVFITSNIEGATLKAKFKQ-ITNVPVAESRNPTPIAMLMPQDDQVW 244 Query: 238 YNIVSW 243 N ++ Sbjct: 245 INYINN 250 >gi|19745862|ref|NP_606998.1| putative ABC transporter (substrate-binding protein) [Streptococcus pyogenes MGAS8232] gi|50913959|ref|YP_059931.1| arginine-binding protein [Streptococcus pyogenes MGAS10394] gi|94990160|ref|YP_598260.1| arginine-binding protein [Streptococcus pyogenes MGAS10270] gi|19748012|gb|AAL97497.1| putative ABC transporter (substrate-binding protein) [Streptococcus pyogenes MGAS8232] gi|50903033|gb|AAT86748.1| Arginine-binding protein [Streptococcus pyogenes MGAS10394] gi|94543668|gb|ABF33716.1| Arginine-binding protein [Streptococcus pyogenes MGAS10270] Length = 278 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 78/262 (29%), Gaps = 17/262 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASIL---GDIKKRGFLKCGINTGLVGFAE---VKANGD 55 +K L ++L+ + + L IKK L ++ F V Sbjct: 11 FKKIRFGFLLCLLLYPLAACNKSEQLNHYERIKKTRKLVVAVSPDYAPFEFKALVNGKDT 70 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G DV +A++ + D ++ P++ +LQ+ + D+ T R Sbjct: 71 IVGADVQLAQAIADELDVD---LELSPMSFDNVLSSLQTGKADLAISGISHTKERAKV-- 125 Query: 116 LAFRPITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F Y +M + +S LSG + Q G+ E + N Sbjct: 126 YDFSIPYYQAENAIVMRASDAKVTKNISDLSGKKVAAQKGSIEEGLVKIQLPKAN----L 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + E +A + A T + + + A A+ + Sbjct: 182 ISLTAMGEAINELKAGQVYAVTLETPVAAGFLAQHKDLALAPFSLKTSDGDAKAVALPKN 241 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 + V+ + E Sbjct: 242 SGDLTKAVNKVIAKLDEQERYK 263 >gi|288961593|ref|YP_003451903.1| extracellular solute-binding protein, family 3 [Azospirillum sp. B510] gi|288913873|dbj|BAI75359.1| extracellular solute-binding protein, family 3 [Azospirillum sp. B510] Length = 275 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 79/245 (32%), Gaps = 22/245 (8%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 T + IL + KRG +K + F+ + + GFD+D +A + + Sbjct: 19 TPMAWAGEILDRVTKRGEVKLVLLNDYPPFSFINDKNELVGFDIDVAKAFAERLGVK--- 75 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-G 136 + + + DI + T R L F Y ++HK + Sbjct: 76 LSIDTPAWEVIAAGNWRGRWDICICSMTPTAERAEV--LDFPVKYYESPAVLVVHKDEAR 133 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNM----------KYHPIVFERVEEIDAAY 186 I + ++G ++ Q+G + E L K K +E Sbjct: 134 IKGIGDITGKTVAAQSGASYEAYLQHALKITAPDAQQPSFPFGKVTVAPYETETVAFQDL 193 Query: 187 RAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 R DA + K D + I+ D + P A+ +GD W V Sbjct: 194 GLGGGKRLDAVITN---YITAKERIDATGQFKIVSDKLYAEPNWVAVEKGDAAWSAKVKA 250 Query: 244 THYAM 248 T A+ Sbjct: 251 TIEAL 255 >gi|153836430|ref|ZP_01989097.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus AQ3810] gi|149750332|gb|EDM61077.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio parahaemolyticus AQ3810] Length = 272 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 84/251 (33%), Gaps = 19/251 (7%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K ++L L I T + + + IK+RG L+ G++T V +A G+ Sbjct: 1 MKLFKATITALLGLAIAMPTIAKEDVATPNVDQIKERGTLRVGMST-FVPWAMRNKQGEL 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GF++D + L+ K++++P AL +K+ D++ T R S + Sbjct: 60 IGFEIDVAKRLAQDSG---LKVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSV 114 Query: 117 AFRPITYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F G +K+ S I + G T + F Sbjct: 115 LFTEPYSHSGVQVAANKELASGFSEFSDFDSRRVKIAARRGAFTVQVARETFPKAK---- 170 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + F+ + A + + + + +SK A A+ Sbjct: 171 ILQFDDDAQAFQEVLNGNAHAVIASSPKPEHETVKHSDKL-FLPFSERLSKGNEAFAVRL 229 Query: 233 GDTEWYNIVSW 243 G+ + + Sbjct: 230 GEEDKRAFFNK 240 >gi|71903241|ref|YP_280044.1| arginine-binding protein [Streptococcus pyogenes MGAS6180] gi|94988281|ref|YP_596382.1| arginine-binding protein [Streptococcus pyogenes MGAS9429] gi|71802336|gb|AAX71689.1| arginine-binding protein [Streptococcus pyogenes MGAS6180] gi|94541789|gb|ABF31838.1| arginine-binding protein [Streptococcus pyogenes MGAS9429] Length = 278 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 78/262 (29%), Gaps = 17/262 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASIL---GDIKKRGFLKCGINTGLVGFAE---VKANGD 55 +K L ++L+ + + L IKK L ++ F V Sbjct: 11 FKKIRFGFLLCLLLYPLAACNKSEQLNHYERIKKTRKLVVAVSPDYAPFEFKALVNGKDT 70 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G DV +A++ + D ++ P++ +LQ+ + D+ T R Sbjct: 71 IVGADVQLAQAIADELDVD---LELSPMSFDNVLSSLQTGKADLAISGISHTKERAKV-- 125 Query: 116 LAFRPITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F Y +M + +S L+G + Q G+ E + N Sbjct: 126 YDFSIPYYQAENAIVMRASDAKVTKNISDLNGKKVAAQKGSIEEGLVKIQLPKAN----L 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + E +A + A T + + + A A+ + Sbjct: 182 ISLTAMGEAINELKAGQVYAVTLEAPVAAGFLAQHKDLALAPFSLKTSDGDAKAVALPKN 241 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 + V+ + E Sbjct: 242 SGDLTKAVNKVIAKLDEQERYK 263 >gi|257878496|ref|ZP_05658149.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257894317|ref|ZP_05673970.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] gi|257812724|gb|EEV41482.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257830696|gb|EEV57303.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] Length = 535 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 88/273 (32%), Gaps = 28/273 (10%) Query: 1 MYKD-----FFVSILCLIILFF----------TSFSTNASILGDIK-KRGFLKCGINTGL 44 M + F + L+ L F T+ S+ + + I+ K+ ++ Sbjct: 36 MKRKHLFHSFVFLMTGLVTLAFGHVAQADNTTTAESSTSETMQKIEPKKDVYVIASDSAF 95 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F A G+++G DV ++ I+ AL+S Q D + Sbjct: 96 APFEFQNAKGEYEGIDVKLMENIAK---LQGFNIRMDYRGFSAALQALESGQADGMIAGM 152 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADY 163 T R+ F + G + K I S L G ++ + GT + L+D+ Sbjct: 153 TVTDERKK--SYDFSDSYFDSGIQLAVKKGDTSIKSYEDLKGKTVGAKVGTESAEFLSDH 210 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + F+ +++ + DA D + + E + S Sbjct: 211 ESEYGYS--IKYFDAADQLYDGLKVGAIDAMMDDYPVIG---YAIKQGQELETPIEKESG 265 Query: 224 SPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255 A A+ + + E N+ + + E Sbjct: 266 GKYAFAVKKGQNPELLNMFNEGLKELKRTGEYD 298 >gi|297202328|ref|ZP_06919725.1| secreted protein [Streptomyces sviceus ATCC 29083] gi|197710152|gb|EDY54186.1| secreted protein [Streptomyces sviceus ATCC 29083] Length = 319 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 44/238 (18%), Positives = 76/238 (31%), Gaps = 20/238 (8%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I+K G +K G N G G D D AL + + Q+ + Sbjct: 60 AKIQKAGVIKVGTNAEYAPMEYQ-EGGKIVGVDPDIAAALGKQLGVE---FQFTSGSFDG 115 Query: 88 RFLALQSKQIDILSRNTDWTLLREI---------SLGLAFRPITYFDGQGFIMHKKKG-- 136 +L S + D+ + T R+ G+ F + G + K Sbjct: 116 LISSLNSGRYDVAMSSITDTKARQEGLDDKGKKLGPGVDFVD-YFTAGTAIYVQKGNPKK 174 Query: 137 ISSVSQLSGASICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I S+ L G + VQ GTT E L A K F+ E ++ Sbjct: 175 IGSIEDLCGQKVAVQHGTTYEQALQKQSTACTAAGKKKLDIESFDNDTEAQTRVKSGGAV 234 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A D + D + ++ + + P A+ + + E + + A++ Sbjct: 235 AGVNDYPVAVDIARKADGGNAFEVVGEQVDAGPFGIAVNKENKELTSALEAAVNAIIQ 292 >gi|261839726|gb|ACX99491.1| ABC-type amino acid transport system substrate binding component [Helicobacter pylori 52] Length = 258 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 33/250 (13%), Positives = 75/250 (30%), Gaps = 13/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ +L + FF F +S+ + R + G F G G+D Sbjct: 1 MKKVLFLFLLVIS--FFGGFLNASSLYERLINRETISVGTEGIYPPFTYHNKEGKLTGYD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R L+ + I++ + L+S + D+++ T ++ Sbjct: 59 VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQAAFDKSL 114 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G ++ K I + + G +T A + + + Sbjct: 115 PYSYSGTIMLVRKDENRIKGIEDIKGLKAANTLSSTYGEI------AFKYDAQIVSVDSM 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R D A+ T+ + + I + + Sbjct: 169 AQALLLVVQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALE 228 Query: 240 IVSWTHYAMV 249 +++ ++ Sbjct: 229 LINQAMQRLI 238 >gi|54296522|ref|YP_122891.1| hypothetical protein lpp0553 [Legionella pneumophila str. Paris] gi|53750307|emb|CAH11701.1| hypothetical protein lpp0553 [Legionella pneumophila str. Paris] Length = 244 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 71/228 (31%), Gaps = 13/228 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K + L+ + F + NG+ KGFD+D + ++ + + + + Sbjct: 23 KNQNTLRFSTSAEYPPFEYI-ENGEIKGFDIDLAKLIAKELGKEA---VFDNMQFSAVLP 78 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 A+ S Q D+ T E F YF+G + + + +SQL+G I V Sbjct: 79 AVNSGQDDVAIATITITE--ERKKNFDFSKPYYFEGMAAVFDTSQPVKEISQLTGKKIAV 136 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q G+ E+ L F + + A A D D + Sbjct: 137 QLGSVMEIWLHQNFPKA----EITALDNNNQAIEALIAGHVDVVLMDGAQGGVYSKKYP- 191 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + IL + +G I S E + Sbjct: 192 GLSYSILAKAN--EGYGLVLKKGSPLRDEINSALENLKAKGEIQKLES 237 >gi|221202164|ref|ZP_03575199.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD2M] gi|221208775|ref|ZP_03581774.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD2] gi|221171407|gb|EEE03855.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD2] gi|221177958|gb|EEE10370.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD2M] Length = 262 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 78/253 (30%), Gaps = 24/253 (9%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M ++I L + +A L+ G+ F NG+ +G Sbjct: 1 MKPTHSLKLAIALACALGSAAAVADAQT---------LRFGLEAQYPPFESKAPNGELQG 51 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D A+ +++ + AL+ ++ D ++ + T R + F Sbjct: 52 FDIDVGNAVCE---TAKLTCKWIETSFDGLIPALKGRKFDAINSAMNATEQR--RQAIDF 106 Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 I Y I G + + L G + V + E +++ + + ++ Sbjct: 107 TTIIYRVPTQLIARTGSGLLPTPESLKGKRVGVLQASIQETYAKAHWEPAGVA--IVAYQ 164 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQ 232 + A A R DA A L+ + + +A + + Sbjct: 165 DQNQAYADLVAGRLDATLVLAPAGQRGFLSRPDGKGFSFVGQPVRDDRILGSGIAFGLRK 224 Query: 233 GDTEWYNIVSWTH 245 GD + Sbjct: 225 GDDALKAKLDAAI 237 >gi|170694817|ref|ZP_02885967.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gi|170140177|gb|EDT08355.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 289 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 87/256 (33%), Gaps = 14/256 (5%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F L LI F S + +A+ +IK RG++ F V A+G G+D D Sbjct: 22 FRTCALALIATFGISHAAHAASAEEIKARGYITVATEDDYTPFEFV-ADGKNTGYDNDLL 80 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + I + ++ + + + + D+ T R + F T Sbjct: 81 ALMRKKIGVE---VKQQVMPWSGILPGVTTGKYDMALSAVLVTDERRKT--FDFASPTCE 135 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK------YHPIVFER 178 + K I L G + + G+ L + + K + ++ Sbjct: 136 AITFYATKKGSSIKGPDDLVGKVVGAETGSAMLTDLKLFNEELKKKHGGSGIKQIVEYQS 195 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 E R DA +L +L RP +I I + +A A+ +G+T+ Sbjct: 196 YPEAYQDLALGRVDAVANTQISLNSL--VKTRPDTFLIGQPIGKPTYIAWAVKKGNTDVL 253 Query: 239 NIVSWTHYAMVTAEEL 254 +V + + E+ Sbjct: 254 KMVDAALLELRKSGEM 269 >gi|148360895|ref|YP_001252102.1| amino acid (glutamine) ABC transporter periplasmic amino acid binding protein [Legionella pneumophila str. Corby] gi|296106039|ref|YP_003617739.1| amino acid (glutamine) ABC transporter, periplasmic amino acid binding protein [Legionella pneumophila 2300/99 Alcoy] gi|148282668|gb|ABQ56756.1| amino acid (glutamine) ABC transporter, periplasmic amino acid binding protein [Legionella pneumophila str. Corby] gi|295647940|gb|ADG23787.1| amino acid (glutamine) ABC transporter, periplasmic amino acid binding protein [Legionella pneumophila 2300/99 Alcoy] Length = 244 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 72/228 (31%), Gaps = 13/228 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K + L+ + F + NG+ KGFD+D + ++ + + + + Sbjct: 23 KNQNTLRFSTSAEYPPFEYI-ENGEIKGFDIDLAKLIAKELGKEA---VFDNMQFSAVLP 78 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 A+ S Q D+ T E F YF+G + + + +SQL+G I V Sbjct: 79 AVNSGQDDVAIATITITE--ERKKNFDFSKPYYFEGMAAVFDNSQPVKEISQLTGKKIAV 136 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q G+ E+ L F + + + A A D D + Sbjct: 137 QLGSVMEIWLHQNFPKA----EIMALDNNNQAIEALIAGHVDVVLMDGAQGGVYSKKYP- 191 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 + IL + +G I S E + Sbjct: 192 GLSYSILAKAN--EGYGLVLKKGSPLRDEINSALENLKAKGEIQKLES 237 >gi|172059801|ref|YP_001807453.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171992318|gb|ACB63237.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MC40-6] Length = 259 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 78/220 (35%), Gaps = 13/220 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ GI F G +GFDVD A+ + + K ++ ALQ+ Sbjct: 26 TLRFGIEAAYPPFESKSPAGQLQGFDVDIGNAVCAKL---NMKCVWVENAFDGLIPALQA 82 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153 ++ D ++ + T R+ + F P Y + H+ + + L G + V G Sbjct: 83 RKFDAINSAMNITAKRK--QSIDFTPAIYVVPIVMVAHRGSPLRPDAASLRGKHVGVLQG 140 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 ++ E L ++ + + + ++I A A R DA + L + Sbjct: 141 SSQEDFLKAHWANAGVA--VVSYPDQDQIYADLVAGRLDAAVQEAQTAQDGFLDKPAGRD 198 Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248 + I+ + + + +GD + A+ Sbjct: 199 YQIVGEPLKDPATLGEGTGFGMRKGDKALQTKIVGALDAL 238 >gi|317047371|ref|YP_004115019.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316948988|gb|ADU68463.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 250 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 80/238 (33%), Gaps = 18/238 (7%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 + L + S S + L G++T V F + + + GFD+D A++ + Sbjct: 10 VTLALVACSATFSAMAQ----DKLVVGVDTAFVPFEFKQGD-KYVGFDIDLWDAIAQKM- 63 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 + P++ LQS+ +D+ T R+ + F Y + Sbjct: 64 --HVSYELRPMDFGGLIPGLQSRNLDVAMAGITITDARK--QVVDFSEGYYDADLLMAVK 119 Query: 133 KKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 I+ S L+G + ++ GT A F K + F ++ +A Sbjct: 120 SSDHAITKFSDLAGKKVGLKQGT-----AAASFMKAKYKADYVEFPNIDNAYLDLQAGNL 174 Query: 192 DAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 DA D + T D I A+ + ++ W V+ A+ Sbjct: 175 DAVVHDSPNVLYYVKTAGDGKVKSTGETDSILPQQYGFAMQK-NSSWTPKVNAALQAL 231 >gi|227820425|ref|YP_002824396.1| amino acid ABC transporter substrate-binding protein [Sinorhizobium fredii NGR234] gi|227339424|gb|ACP23643.1| probable amino acid ABC transporter, substrate-binding protein [Sinorhizobium fredii NGR234] Length = 275 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 38/259 (14%), Positives = 83/259 (32%), Gaps = 22/259 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F + L F + + L + + + N+G + + + + GFD Sbjct: 1 MRRLFAKLAIGAAALAFATVAQAGETLDRVMDKKAMVVATNSGWPPQSYLDDSNEMVGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + + + + + + D+ + T R + + F Sbjct: 61 IDVSKEIAKRLGVE---VSFETPDWATLTGGRWQGRYDLGVGSVTPTKAR--AQVIDFAG 115 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF---- 176 I Y+ +++HK SV+ L+G I V+ TT+E + + P+ + Sbjct: 116 IYYYSPYVYVLHKDSQAKSVADLNGKIIGVETATTSEDFIRRQLEIDAPGLPPVEYKLEP 175 Query: 177 ---ERVEEI---DAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPL 226 + R R DA +L + + PL Sbjct: 176 GEIRTFADSMLPFDDLRLGDGVRLDAVIAPE---QTAMNAIKNGYPLRVLDGEYAFREPL 232 Query: 227 APAIIQGDTEWYNIVSWTH 245 + D +W + Sbjct: 233 VVIAEKVDPDWTTKIGEIL 251 >gi|161523299|ref|YP_001578311.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189351929|ref|YP_001947557.1| polar amino acid transporter substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|160340728|gb|ABX13814.1| extracellular solute-binding protein family 3 [Burkholderia multivorans ATCC 17616] gi|189335951|dbj|BAG45021.1| polar amino acid transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] Length = 262 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 77/247 (31%), Gaps = 22/247 (8%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 ++I L + +A L+ G+ F NG+ +GFD+D Sbjct: 7 LKLAIALACALGSAAAVADAQT---------LRFGLEAQYPPFESKAPNGELQGFDIDVG 57 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 A+ +++ + AL+ ++ D ++ + T R + F I Y Sbjct: 58 NAVCE---TAKLTCKWVETSFDGLIPALKGRKFDAINSAMNATEQR--RQAIDFTTIIYR 112 Query: 125 DGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 I G + + L G + V + E +++ + + ++ + Sbjct: 113 VPTQLIARTGSGLLPTPESLKGKRVGVLQASIQETYAKAHWEPAGVA--IVAYQDQNQAY 170 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGDTEWY 238 A A R DA A L+ + + +A + +GD Sbjct: 171 ADLVAGRLDATLVLAPAGQRGFLSRPDGKGFSFVGQPVRDDRILGSGIAFGLRKGDDALK 230 Query: 239 NIVSWTH 245 + Sbjct: 231 AKLDAAI 237 >gi|76819835|ref|YP_336270.1| glutamate/aspartate periplasmic binding protein [Burkholderia pseudomallei 1710b] gi|167829459|ref|ZP_02460930.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei 9] gi|226196913|ref|ZP_03792491.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei Pakistan 9] gi|237509750|ref|ZP_04522465.1| glutamate/aspartate periplasmic-binding protein [Burkholderia pseudomallei MSHR346] gi|254265446|ref|ZP_04956311.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1710a] gi|76584308|gb|ABA53782.1| glutamate/aspartate periplasmic binding protein precursor [Burkholderia pseudomallei 1710b] gi|225930896|gb|EEH26905.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei Pakistan 9] gi|235001955|gb|EEP51379.1| glutamate/aspartate periplasmic-binding protein [Burkholderia pseudomallei MSHR346] gi|254216448|gb|EET05833.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 1710a] Length = 240 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 74/219 (33%), Gaps = 6/219 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSKI 78 +A L I + V F + GF D A+ + +I Sbjct: 15 HARTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVVDDVRKKLKMPGLQI 74 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Y+P+ + R L + D+ +T T R ++F ++ G ++ K I Sbjct: 75 AYIPVTGQNRNPLLVNDTYDLEGGSTTNTAAR--GQDVSFSISLFYAGTRVLVKKASRIR 132 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G ++ AG+T E + Y H++ + + + R D Sbjct: 133 GYADLAGKTVATAAGSTNENVIRKYAADHHLDIDVVPAKDYAAGPRMVESDRTAVLALDD 192 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 L+ ++ P + D + P + +GD Sbjct: 193 VLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDPAS 231 >gi|257882917|ref|ZP_05662570.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|257884373|ref|ZP_05664026.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] gi|257889304|ref|ZP_05668957.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|260560085|ref|ZP_05832263.1| amino acid ABC transporter [Enterococcus faecium C68] gi|261207427|ref|ZP_05922113.1| amino acid ABC transporter [Enterococcus faecium TC 6] gi|289566473|ref|ZP_06446898.1| amino acid ABC transporter [Enterococcus faecium D344SRF] gi|257818575|gb|EEV45903.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|257820211|gb|EEV47359.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] gi|257825664|gb|EEV52290.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|260073920|gb|EEW62244.1| amino acid ABC transporter [Enterococcus faecium C68] gi|260078318|gb|EEW66023.1| amino acid ABC transporter [Enterococcus faecium TC 6] gi|289161738|gb|EFD09613.1| amino acid ABC transporter [Enterococcus faecium D344SRF] Length = 535 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 90/273 (32%), Gaps = 28/273 (10%) Query: 1 MYKD-----FFVSILCLIILFF----------TSFSTNASILGDIK-KRGFLKCGINTGL 44 M + F + L+ L F T+ S+ + + I+ K+ ++ Sbjct: 36 MKRKHLFHSFVFLMTGLVTLAFGHVAQADNTTTAESSTSETMQKIEPKKDVYVIASDSAF 95 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F A G+++G DV ++ I+ AL+S Q D + Sbjct: 96 APFEFQNAKGEYEGIDVKLMENIAK---LQGFNIRMDYRGFSAALQALESGQADGMIAGM 152 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADY 163 T R+ F + G + K I S L G ++ + GT + L+D+ Sbjct: 153 TVTDERKK--SYDFSDSYFDSGIQLAVKKGDTSIKSYEDLKGKTVGAKVGTESAEFLSDH 210 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + F+ +++ + DA D + + + E I + K Sbjct: 211 ESEYGYS--IKYFDAADQLYDGLKVGAIDAMMDDYPVI-GYAIKQGQELETPIKKESGGK 267 Query: 224 SPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255 A A+ + + E N+ + + E Sbjct: 268 --YAFAVKKGQNPELLNMFNEGLKELKRTGEYD 298 >gi|254463985|ref|ZP_05077396.1| ABC transporter, periplasmic amino acid-binding protein [Rhodobacterales bacterium Y4I] gi|206684893|gb|EDZ45375.1| ABC transporter, periplasmic amino acid-binding protein [Rhodobacterales bacterium Y4I] Length = 258 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 81/224 (36%), Gaps = 17/224 (7%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L+ G F ++++G GFDV+ L I + + + L + Sbjct: 26 LRLGTEGAYPPFNYIESDGKIAGFDVEIGLELCKRIG---EECTVVAQDWDGIIPGLLAS 82 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAG 153 + D + + T R+ + F Y ++ K I + L+G I Q+G Sbjct: 83 KYDFIIASMFITEERKK--QVDFTDPYYLAAMTHVVPKGSDITEFTNEALAGKVIGAQSG 140 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT ADY +A ++ +E++ + R D GD+ + +D S Sbjct: 141 TTQ----ADYIEAAYPDADIRLYPTQDEVNLDMASGRIDLQVGDMLPMLDWTAKSDDGSC 196 Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + D I+ + A+ Q D ++ A + A+ Sbjct: 197 CELAGDPITDPAFVGEGVGIAVRQEDDALREKLNTAL-AEIRAD 239 >gi|119961076|ref|YP_946399.1| amino acid ABC transporter [Arthrobacter aurescens TC1] gi|119947935|gb|ABM06846.1| amino acid ABC transporter [Arthrobacter aurescens TC1] Length = 273 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 80/247 (32%), Gaps = 16/247 (6%) Query: 9 ILCLIILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + ++ L ST +S + + G ++ + ++G++ GFDV+ Sbjct: 1 MAAILALSGCGGSTASSSPSAENPYGLIEPGTIRVASLGDSKPYTFTDSSGNFTGFDVEL 60 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + ++ D + + + A+ + Q D+ T R+ + + F Sbjct: 61 FKDVAHRAGVD--NVVFTGQDFSGLLAAVANGQFDVGVAAIGITDKRKET--VDFSDGYL 116 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 I K GI+ L+G + V GT E F + + F Sbjct: 117 AGYLTVITTKTSGINDADGLNGKRLGVVQGTLQEAYAVKNFTSA----QLVRFPDNNTAI 172 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 +A + DA+ D A K ++ +P AI + + ++ Sbjct: 173 SAVNSGSVDAHFLD---YEAAKEYQEQFGLVSAADIPSFDAPAGFAIAKDKPAFKEALNK 229 Query: 244 THYAMVT 250 + Sbjct: 230 GLAEAME 236 >gi|146311623|ref|YP_001176697.1| extracellular solute-binding protein [Enterobacter sp. 638] gi|145318499|gb|ABP60646.1| amino acid ABC transporter substrate-binding protein, PAAT family [Enterobacter sp. 638] Length = 257 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 42/243 (17%), Positives = 82/243 (33%), Gaps = 21/243 (8%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 L + + SFS A+ L+ G+ F A+G+ +GFD+D +A+ Sbjct: 5 ALVVGMGLLCSFSALAAT--------ELRYGLEAEYPPFESRNASGELEGFDIDLGKAIC 56 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 A K ++ + L +K+ D ++ + T R + F Y Sbjct: 57 KAA---ELKCSWVETSFDALIPGLMAKKFDAINSAMNITDQR--RQSIDFTQPIYRIPSQ 111 Query: 129 FIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + G+ + L G SI V G+ E ++++ H + ++ Sbjct: 112 LVGKAGTGVEATPEGLKGKSIGVLQGSIQETYAKEHWEKHG--VTVVSYKDQNMAWGDLL 169 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGDTEWYNIVS 242 R DA +A A L+ + + +S + + +GD + Sbjct: 170 NGRIDASLVMSAAGQAGFLSKPQGKGFGFIGKPVSDDTILGSGIGFGLRKGDEATKKQLD 229 Query: 243 WTH 245 Sbjct: 230 AAI 232 >gi|254557735|ref|YP_003064152.1| amino acid ABC transporter, substrate binding protein [Lactobacillus plantarum JDM1] gi|254046662|gb|ACT63455.1| amino acid ABC transporter, substrate binding protein [Lactobacillus plantarum JDM1] Length = 267 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 87/256 (33%), Gaps = 22/256 (8%) Query: 1 MY---KDFFVSILCL-IILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVK 51 M K V++L L + + T+ +N S ++K G L G+ ++ Sbjct: 1 MKSWVKKLGVAVLGLGLAVTLTACGSNTSSSSKSNDLGLQKSGTLTIGLEGTFQPYSYR- 59 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G GF+VD +A++ + +++P L + + D++ N T R+ Sbjct: 60 KDGKLTGFEVDLGKAVAKKMGLKA---KFVPTKFDSLVAGLDTNKFDVVMNNMSETAARK 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F + + K IS ++ + G A TTT D A + Sbjct: 117 K--KYLFSTPYIYSKSQLAVKKNSSISKITDIKGKK---VAETTTSNNATD---AKRLGA 168 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAI 230 + ++ R + YA N + + +I D I+ + + Sbjct: 169 TITPTDSFQQSIDLVSQGRVAGTINSRESFYAYFKQNPKANIKLIDSGDHIASQKIGVIV 228 Query: 231 IQGDTEWYNIVSWTHY 246 + + +S Sbjct: 229 TKQHPKMQKQISKAIQ 244 >gi|186685028|ref|YP_001868224.1| extracellular solute-binding protein [Nostoc punctiforme PCC 73102] gi|186467480|gb|ACC83281.1| extracellular solute-binding protein, family 3 [Nostoc punctiforme PCC 73102] Length = 271 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 92/244 (37%), Gaps = 15/244 (6%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F++S ++ FT+ + + +I++RG+L + L ANG+ +G ++D Sbjct: 22 IFWISCFSIVGTGFTASAAE---MPEIQQRGYLTVAVKDNLRPLGFRDANGNLQGLEIDL 78 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + L+ + ++ P+ ++R + K++D T R ++F Y Sbjct: 79 AQRLALDLVGKTDAVKLQPVANRDRLSVVLDKKVDFAIARVTATESRSRI--VSFSVPYY 136 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 DG + ++ +S L+ I V ++T + Y + E Sbjct: 137 LDGTVLVTKDAS-VNKLSDLAKQKIAVLNNSSTIAKVRFYLP----NAELVGVNSYHEAR 191 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ--GDTEWYNIV 241 ++ A+ D + L ++ +LP +S PL+ + + + V Sbjct: 192 EKIESNAAVAFAADATVLSGWVQQYP---QYQLLPTKLSTEPLSVVMPKGLQYDKLRRNV 248 Query: 242 SWTH 245 + Sbjct: 249 NQAI 252 >gi|187923561|ref|YP_001895203.1| cationic amino acid ABC transporter periplasmic binding protein [Burkholderia phytofirmans PsJN] gi|187714755|gb|ACD15979.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia phytofirmans PsJN] Length = 264 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 86/246 (34%), Gaps = 20/246 (8%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 + G+ F +G+ +GFD+D A+ + + +K ++ + ALQ Sbjct: 30 KEVHFGVEASYAPFESKSPSGELQGFDIDVGNAVCAKL---KAKCVWVENSFDGLIPALQ 86 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152 +++ + ++ + T R + F Y I K G + + + L G + V Sbjct: 87 ARKFNAINSDMTITDQR--RQAVDFTDPIYTIPNQMIAKKGSGLLPTPASLKGKHVGVLQ 144 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT E + + + ++ ++I A + R DA D A L + + Sbjct: 145 GTIQETYAKARWAPAGVD--VVPYQTQDQIYADLASGRLDAAFQDAEAASKGFLKKPQGA 202 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 ++ L + +GD + ++ EL I++ + Sbjct: 203 GFEFAGPAVTDEKLLGAGVGFGVRKGDKALKDALNQALK------ELKADGT-IDRFAAK 255 Query: 268 TTNPDV 273 + V Sbjct: 256 YFDVKV 261 >gi|86357103|ref|YP_468995.1| amino acid ABC transporter substrate-binding protein [Rhizobium etli CFN 42] gi|86281205|gb|ABC90268.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 264 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 73/211 (34%), Gaps = 11/211 (5%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAI 71 I L + + + L IK RG L G+ F + + KG+++D +AL+ + Sbjct: 3 ISLLAATQAFADATLDRIKARGALTVGVILSGAPFGYIDPTSQTQKGYNLDIAKALADDL 62 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 + + R LQ ++DIL N +T R L P G + Sbjct: 63 GVKLETVT---VTPPNRVQFLQQGKVDILIANMQYTEDRAKVLDWVPTP-YDRSGGAAVG 118 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 K G+ + L G +CV G+ L + + A E A + C Sbjct: 119 RKDSGLKDWADLKGKPVCVSQGSNYTQPLIEKYGA-----EVKGLPSQPESLLALQGGNC 173 Query: 192 -DAYTGDISALYALKLTNDRPSEHVILPDII 221 A + L+ + ++ IL Sbjct: 174 VVAVHVGATLGLLLRDRPEDWEDYAILFPTE 204 >gi|55377279|ref|YP_135129.1| glutamine ABC transporter permease protein [Haloarcula marismortui ATCC 43049] gi|55230004|gb|AAV45423.1| glutamine ABC transporter permease protein [Haloarcula marismortui ATCC 43049] Length = 262 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 77/249 (30%), Gaps = 18/249 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + + +I + + + S L G G F + +G+ GFDV Sbjct: 9 RRRYLQAIGGTVATLSVAGCQSDSG-----DSQTLTAGTAPGFPPFEMKQ-DGELVGFDV 62 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + A+ +A + + L K AL + +D+++ R+ + F Sbjct: 63 ELLEAVVAA--TEYELSGWEELEFKSLIPALNNGNVDVVAAGMTINDERDK--AIDFSDP 118 Query: 122 TYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV--FE 177 Y Q I+ + SS+ LS A++ Q GTT E + D + Sbjct: 119 YYSSNQAIIVRENGSFSPSSLEDLSEAAVGAQKGTTGESVIKDQLIEAGTIPESQYNAYG 178 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 D D A DRP + + + I G+ E Sbjct: 179 NYVLAVEDLLNENVDVIIID--VPVANSFVADRPIKSAFVHETG--EQFGFGIQSGNDEL 234 Query: 238 YNIVSWTHY 246 ++ Sbjct: 235 AGALNSGLT 243 >gi|260425190|ref|ZP_05779180.1| glutamine ABC transporter, glutamine-binding protein [Dialister invisus DSM 15470] gi|260404444|gb|EEW97991.1| glutamine ABC transporter, glutamine-binding protein [Dialister invisus DSM 15470] Length = 271 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 66/208 (31%), Gaps = 13/208 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRG-----FLKCGINTGLVGFAEVKANGDW 56 V++ ++L + +A L+ G F +G + Sbjct: 8 KITLAVAMAAGLLLGVSGCGKSAEAEKQAPASKAGTEKVLRVGGEATYPPFLFKDEHGHY 67 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GF++D +A++ I + + Y + + A+++K++D++ + T R Sbjct: 68 VGFEMDLIKAVAKEIGAE---VAYTDMPFSQFMTAVENKKVDVVISAVEGTAERAEKAAF 124 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 + + I + L G ++ G+T E + Sbjct: 125 SDVYYKKGVYCILVRKDDDRIHAADDLKGKTVTAVKGSTNEA-----LAKKLGADQIVEA 179 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYAL 204 E +I A + DA D Y Sbjct: 180 EYNADIFKNLEAGKADAVITDEPLAYYY 207 >gi|55378505|ref|YP_136355.1| amino acid ABC transporter amino acid-binding protein [Haloarcula marismortui ATCC 43049] gi|55231230|gb|AAV46649.1| amino acid ABC transporter amino acid-binding protein [Haloarcula marismortui ATCC 43049] Length = 266 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 79/248 (31%), Gaps = 13/248 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + + ++ + + + G G F + +G+ GFD+ Sbjct: 8 RRQYLSTVGGTAVTVSLAGCFGGGGGNGGDGSTEITAGTAPGFPPFEMKQ-DGELVGFDI 66 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A+ D + + K AL ++ ID+++ R+ + + F Sbjct: 67 DLLEAVIDE--TDYTLAGWEEFEFKSLIPALTNENIDVVAAGMTINDERDET--IDFTDP 122 Query: 122 TYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYF--KAHNMKYHPIVFE 177 Y Q ++ + S S+S LSG I Q GTT E T+ D + + + + Sbjct: 123 YYSSNQAIVVREDGDFSPASLSDLSGRPIGAQKGTTGETTVQDELISPGNLDESNYNSYG 182 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + DA D A RP + + GD E+ Sbjct: 183 NYVLAVEDLQNGNIDAVVIDEP--VAQTFAAQRPVTIAFTYETG--ENFGFGVRDGDDEF 238 Query: 238 YNIVSWTH 245 ++ Sbjct: 239 TQALNDGL 246 >gi|300870918|ref|YP_003785789.1| family 3 extracellular solute-binding protein [Brachyspira pilosicoli 95/1000] gi|300688617|gb|ADK31288.1| extracellular solute binding protein, family 3 [Brachyspira pilosicoli 95/1000] Length = 244 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 82/243 (33%), Gaps = 24/243 (9%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 + F S S K L G N F + GFD+D ++ + D Sbjct: 17 VAFMSCSA---------KENKLYVGTNAEFEPFEYRDGE-NIVGFDIDLINEIAKIMKQD 66 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 I+ + + ALQSK+IDI+ R+ + F Y Q ++HK Sbjct: 67 ---IEVVDMAFDGLLPALQSKKIDIIIAGMTADEERKKF--VNFTDPYYSTQQSILVHKD 121 Query: 135 K-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I S L G ++ V G T +L ++ + + E A ++ + DA Sbjct: 122 NKDIYSFDNLEGKNVGVVLGFTGDLIVSAM-----SNVNAQKYGATSEAILALKSKKVDA 176 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 D + + + ++ A A+ + DTE V+ + Sbjct: 177 VVLD-YEPASKYFDQNN--DLKLIITDSKSEEYAIAMRKEDTELLKKVNDALNTIKENGT 233 Query: 254 LGI 256 + Sbjct: 234 YDM 236 >gi|126457096|ref|YP_001076757.1| solute-binding family 1 protein [Burkholderia pseudomallei 1106a] gi|242312395|ref|ZP_04811412.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1106b] gi|126230864|gb|ABN94277.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein, truncation [Burkholderia pseudomallei 1106a] gi|242135634|gb|EES22037.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 1106b] Length = 240 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 74/219 (33%), Gaps = 6/219 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSKI 78 +A L I + V F + GF D A+ + +I Sbjct: 15 HARTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVVDDVRKKLKMPGLQI 74 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Y+P+ + R L + D+ +T T R ++F ++ G ++ K I Sbjct: 75 AYIPVTRQNRNPLLVNDTYDLEGGSTTNTAAR--GQDVSFSMNLFYAGTRVLVKKASRIR 132 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G ++ AG+T E + Y H++ + + + R D Sbjct: 133 GYADLAGKTVATAAGSTNENVIRKYAADHHLDIDVVPAKDYAAGPRMVESDRTAVLALDD 192 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 L+ ++ P + D + P + +GD Sbjct: 193 VLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDPAS 231 >gi|227512685|ref|ZP_03942734.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus buchneri ATCC 11577] gi|227084150|gb|EEI19462.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus buchneri ATCC 11577] Length = 272 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 73/253 (28%), Gaps = 21/253 (8%) Query: 2 YKDFFVSILCLIILFFTSFS------TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 + V + L + T+ N + ++K+ L G+ ++ +G Sbjct: 8 KRSLLVVGIALAGVALTACGSSSSSSKNGTYRSELKQSKQLTIGLEGTYPPYSYR-KDGK 66 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GF+V+ +A++ + ++P L S + D++ N T R Sbjct: 67 LTGFEVELGKAVAKKLGVKA---NFVPTKWDSLIAGLGSGKYDVVLNNITQTPERRK--Q 121 Query: 116 LAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + I I + + + G+ EL A + Sbjct: 122 YLFSKPYVYSRYVLITRSGSNAIKTTADIKDKKFAEATGSDNELI------AKKFGAVIV 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQ 232 E+ + + R SAL N L + P ++ + Sbjct: 176 PQEQFQTSLDLIKQGRAQGAINAESALLTYAKDNSIKGLKYRLLKDSEQKPAKISGLFNK 235 Query: 233 GDTEWYNIVSWTH 245 + N + Sbjct: 236 KSPKLKNKFNKVL 248 >gi|111017997|ref|YP_700969.1| ABC transporter, substrate-binding component [Rhodococcus jostii RHA1] gi|110817527|gb|ABG92811.1| ABC transporter, substrate-binding component [Rhodococcus jostii RHA1] Length = 307 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 76/245 (31%), Gaps = 16/245 (6%) Query: 22 TNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 A+ L I G + G+N +G GFDVD A+S + P Y Sbjct: 55 AIAATLPEKIASSGKIIVGVNIPYSPNEFKDPSGKIVGFDVDLVDAVSKVLGVTPE---Y 111 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + ++Q+ D+ + T RE + F + G + K + Sbjct: 112 TEADFDKIIPSIQAGSYDMGMSSFTDTKERE--QSVDFT-TYFSAGVQWAQPAGKSV-DP 167 Query: 141 SQLSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + G + VQ T + A A + F+ ++ A + DA + Sbjct: 168 TNACGLRVGVQTTTIEDLEEVPAKSAACVAAGKPPIEIVKFDSQDDAANAVALGKVDAMS 227 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D +D E ++ +P + +G + ++ Sbjct: 228 ADSPVTAYAIKQSDGKIE--AAGEVFDAAPYGWPVAKGSP-LAQTLQQALQHLIDDGTYR 284 Query: 256 ITQKN 260 +N Sbjct: 285 TIAEN 289 >gi|253755502|ref|YP_003028642.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis BM407] gi|251817966|emb|CAZ55746.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis BM407] Length = 732 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 66/210 (31%), Gaps = 15/210 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + ++ +FF IK + + F ++ +KG D Sbjct: 1 MKKKLLMLLASILPVFFIFTG--------IKADDTIDVVFDNAYAPFEFKDSDQIYKGLD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ ++ A+Q+ D L T T R+ F Sbjct: 53 VDIINEVAKRSGWTMNQ---SFPGFDAAVNAVQAGSADALMAGTTITEARKKV--FTFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + K ISS L G ++ V+ GT + L + + + F+ + Sbjct: 108 PYFDTKIVIATTKVNTISSYKDLKGKTVGVKNGTAAQNFLEENKDKYGY--NVKTFDTGD 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + A DA D + + Sbjct: 166 LMYNSLSAGAVDAVMDDEAVIQYAIQQGQD 195 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 74/242 (30%), Gaps = 15/242 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L T ++ + +K + ++ F +G++ G D++ +A++ Sbjct: 262 LSLTGNASAKATP--VKSSYTIVA--DSSFAPFEYQDESGNYVGIDMELIKAIAE---HQ 314 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 I A+Q+ Q D + T R+ F Y + Sbjct: 315 GFTITIQNPGFDAALNAVQAGQADAVIAGMSITDARKEI--FDFSNAYYTSNILLAVKNG 372 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+S L G ++ + GT + L + Y F+ + + + DA Sbjct: 373 SDIASYEDLKGKTVGAKNGTASYSFLEEN--KSKYGYTLKAFDEASSMYDSLNSGSIDAL 430 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEE 253 D L + A+ +G + E + + A+V + + Sbjct: 431 MDDE---AVLLYAIQQGRNFATPIPGEKSGEYGFAVKKGANPELIEMFNNGLAALVESGK 487 Query: 254 LG 255 Sbjct: 488 YD 489 >gi|329922367|ref|ZP_08278044.1| ABC transporter, permease protein [Paenibacillus sp. HGF5] gi|328942230|gb|EGG38501.1| ABC transporter, permease protein [Paenibacillus sp. HGF5] Length = 480 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 34/283 (12%), Positives = 93/283 (32%), Gaps = 25/283 (8%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55 M + F ++++ +++L F S ++ + G + + + Sbjct: 1 MKRKFTAWMTLFMVVVLSFGSLVHAEG------EKKTVILGTSADYAPYEFHKTIDGVDT 54 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GFD+D + ++ + + + + L S ++D + + T + Sbjct: 55 IVGFDIDIAKEIAKDLGAE---LIIKDTSFDALLPELTSGRVDFVISGMNPTE--DRRKS 109 Query: 116 LAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F Y Q ++ K+ + +++ L GA I VQ + E A+ Sbjct: 110 IDFSEPYYAAEQSVVVRKEDAQKFNTLESLEGARIGVQKSSIQESIAKTIPNAN-----V 164 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + +++ ++ + R D + A + +G Sbjct: 165 VSLDKIPDLLLQLESERVDVVLAEYPIAKTNMNEAT--MVITDAKPTAENDTYAIGVRKG 222 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 + E ++ T + ++ + + ++ T ++ F Sbjct: 223 NEELLGSINATLERLKENNQIQKFVDDASDLAAGRTAENLNTF 265 >gi|222102794|ref|YP_002539833.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] gi|221739395|gb|ACM40128.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] Length = 272 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 81/256 (31%), Gaps = 29/256 (11%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 S L +L + S + + G L+ G F+ ANG+ GFD D Sbjct: 5 KIIQSTLASTLLLIAATSAAYA------EEGVLRIGTEGDAPLFSMADANGNVTGFDADI 58 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + + + K +++ ++ S + D++ T R + + Sbjct: 59 ANGICAEL---KVKCKFVVQAFSSLIPSMDSDRFDVIISGLGITEERAK--KIDYSIPYA 113 Query: 124 FDGQGFIMHKKKGISSV-------SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F++ K ++ + L+G S+ V GTT + + Sbjct: 114 TTPLYFVVPKSSPLAGLKSLTEIEKSLTGKSVGVVTGTTYAKFIEKRIP----GADLKTY 169 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-LPDIISKSP------LAPA 229 + + A + R DA GD + D + I + + P + Sbjct: 170 DATTQQTADLASGRLDAAFGDSPTWMDFLASADGANFTKIDVKIMSMDDPDVLGHGMGVG 229 Query: 230 IIQGDTEWYNIVSWTH 245 + +G++ V Sbjct: 230 MRKGNSALKAKVDAAL 245 >gi|325284209|ref|YP_004256750.1| ABC-type transporter, periplasmic subunit family 3 [Deinococcus proteolyticus MRP] gi|324316018|gb|ADY27133.1| ABC-type transporter, periplasmic subunit family 3 [Deinococcus proteolyticus MRP] Length = 279 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 36/196 (18%), Positives = 66/196 (33%), Gaps = 12/196 (6%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + ++ + + I+K G L+ + + + GFDVD AL+ I + Sbjct: 42 TAAAPASGGACMERIRKDG-LRVITSPDYPPYESTNEQNEIVGFDVDMVNALAQEIGVEA 100 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM-HKK 134 ++ +L S + D+++ T R +AF ++ K Sbjct: 101 ---KFTGQGFDGLIPSLISGRADLIAAGLTMTEERAK--SVAFSDPYEETKNVIVVSAKD 155 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I + L+G ++ VQ GT A F E AA ++ + D+ Sbjct: 156 TAIKDAATLNGKTVGVQLGTVQADVAEKIAGA-----DVRTFNLFSEALAALKSGQIDSM 210 Query: 195 TGDISALYALKLTNDR 210 D A N Sbjct: 211 IVDAPAGQNYVKANSD 226 >gi|296271865|ref|YP_003654496.1| family 3 extracellular solute-binding protein [Arcobacter nitrofigilis DSM 7299] gi|296096040|gb|ADG91990.1| extracellular solute-binding protein family 3 [Arcobacter nitrofigilis DSM 7299] Length = 311 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 70/241 (29%), Gaps = 14/241 (5%) Query: 1 MYKDFF----VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M F ++ ++ + A +L DIK +G + F + +G Sbjct: 28 MKSILFPFQKTLLVASLVCTTFVHTAQADLLEDIKAKGEIVIATEARYAPFEML-KDGKI 86 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G+D D + + L + L +K+ D + T R Sbjct: 87 VGYDEDILHEILKDLPGVKLTQL--DLPFQGILTGLSAKRYDFVVTALTLTKKR--MDKY 142 Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK---YH 172 AF + K I S ++G + +Q G+ T+ Y KA K Sbjct: 143 AFTYPISTASLVILKRKGDDRIKSPKDMAGMILGIQRGSAQLKTIKAYEKAELSKKGYKK 202 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 F E A + R D + L ++ ++ P + Sbjct: 203 IKEFTDYNEAYTALASGRVDVVPQALPNLASVVKERSD-IFEIVRPSFGPDLYYGWVGRK 261 Query: 233 G 233 Sbjct: 262 D 262 >gi|294498827|ref|YP_003562527.1| sulfur-containing amino acid ABC transporter sulfur-containing amino acid-binding protein TcyK [Bacillus megaterium QM B1551] gi|294348764|gb|ADE69093.1| sulfur-containing amino acid ABC transporter, sulfur-containing amino acid-binding protein TcyK [Bacillus megaterium QM B1551] Length = 273 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 87/257 (33%), Gaps = 14/257 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS------TNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K +I ++L + + ++K + G T + G Sbjct: 1 MKKLQLTAIFLSLLLLLAACGTPNKETAANASKDKVQK---IIVGTGTQFPNICFLDDKG 57 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + G+DV+ + + + K ++ ++ L+L+S +ID+++ + R+ Sbjct: 58 NLTGYDVELVKEIDKRL--PNYKFEFKTMDFSNLLLSLESNKIDLVAHQMEVNEERKQKF 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 P F + K I S+ L+G + V A + + + Y K H K + + Sbjct: 116 LFNKEPYNIFPLHVVVNEKNTSIKSIKDLNGKKVIVGATSNSANLIDKYNKEHGNKINIV 175 Query: 175 VFER-VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + ++ + R DA T + V+ P I + + + Sbjct: 176 YSGQGSDDTKTQLKTGRADA-TISTPFAVDFVNKQADAEQKVVGPAISNSKVY-FMLRKN 233 Query: 234 DTEWYNIVSWTHYAMVT 250 +T V + Sbjct: 234 ETGLQKDVDKALKEIKE 250 >gi|237751714|ref|ZP_04582194.1| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Helicobacter bilis ATCC 43879] gi|229373080|gb|EEO23471.1| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Helicobacter bilis ATCC 43879] Length = 257 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 83/259 (32%), Gaps = 20/259 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIK--KRGFLKCGINTGLVGFAEVKANGDWKG 58 M K + LFF + S ++ L+ G+N F + G Sbjct: 1 MKK-ILSLLCVSFALFFVACSK-----EEVCGGNDKELRVGLNAEYPPFEYKQDA-KIIG 53 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D A+S + + ++ AL++ +ID++ + T R + F Sbjct: 54 FDIDMLDAVSKKVGFNY---TLNHMSFDGLIPALKACKIDMIISSMSATQER--MKQVDF 108 Query: 119 RPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 Y +I K I + G + V GT E +N+K ++ E Sbjct: 109 SIPYYEGETLYIKRKDSADIVDKDSIKGKKVGVFLGTVQEQAAQKMKDEYNIK--VVMSE 166 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT-E 236 + ++ + D D + N+ + L+ A +G E Sbjct: 167 SILGAILNLKSGKVDVALADYATAQGYLKENEELIGFYH--EKDGSEGLSIAFDKGKHAE 224 Query: 237 WYNIVSWTHYAMVTAEELG 255 ++ + + E Sbjct: 225 LLAKINEAIKELKESGEYD 243 >gi|227509740|ref|ZP_03939789.1| L-cystine ABC superfamily ATP binding cassette transporter, binding protein YckK [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190664|gb|EEI70731.1| L-cystine ABC superfamily ATP binding cassette transporter, binding protein YckK [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 310 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 34/253 (13%), Positives = 73/253 (28%), Gaps = 21/253 (8%) Query: 2 YKDFFVSILCLIILFFTSFS------TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 + V + L + T+ N + ++K+ L G+ ++ +G Sbjct: 46 KRSLLVVGIALAGVALTACGSSSSSSKNGTYRSELKQSKQLTIGLEGTYPPYSYR-KDGK 104 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 GF+V+ +A++ + ++P L S + D++ N T R Sbjct: 105 LTGFEVELGKAVAKKLGVKA---NFVPTKWDSLIAGLGSGKYDVVLNNITQTPERRK--Q 159 Query: 116 LAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F + I I + + + G+ EL A + Sbjct: 160 YLFSKPYVYSRYVLITRSGSNAIKTTADIKDKKFAEATGSDNELI------AKKFGAVIV 213 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQ 232 E+ + + R SAL N L + P ++ + Sbjct: 214 PQEQFQTSLDLIKQGRAQGAINAESALLTYAKDNSIKGLKYRLLKDSEQKPAKISGLFNK 273 Query: 233 GDTEWYNIVSWTH 245 + + + Sbjct: 274 KSPKLKDKFNKVL 286 >gi|89100886|ref|ZP_01173736.1| Periplasmic amino acid binding protein [Bacillus sp. NRRL B-14911] gi|89084422|gb|EAR63573.1| Periplasmic amino acid binding protein [Bacillus sp. NRRL B-14911] Length = 262 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 29/250 (11%), Positives = 67/250 (26%), Gaps = 20/250 (8%) Query: 4 DFFVSILCLIILFFTS-------FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 L + + S + + S+ IK++G + G F G Sbjct: 2 ILLTFALAISLAACGSSGDGDKDTAKDQSLYDQIKEKGEITIGTEGTYAPFTYHDKEGKL 61 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GFD++ + + P ++ L +K+ D+++ + Sbjct: 62 TGFDIEIAEEVFKRLDIKP---VFVETKWDGMIAGLDAKRYDLVANEVAV--REDRLEKY 116 Query: 117 AFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + I ++ L G + + + + H + Sbjct: 117 DMSDPYIVSKAVLIVHENNDEIKTLDDLDGKKVG----QSLDSNYRKIAEEHGATNTVVE 172 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + + R DA T + S Y + + + + A +G Sbjct: 173 --GFNQSIDLITSGRIDA-TLNDSLSYLDLKKQRPELPVKTVYEEENATSNAFLFRKGSD 229 Query: 236 EWYNIVSWTH 245 + V+ Sbjct: 230 DLVEAVNGAL 239 >gi|209518287|ref|ZP_03267113.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209501307|gb|EEA01337.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 286 Score = 105 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 81/247 (32%), Gaps = 11/247 (4%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVD 62 +I+ L S + L I R + G+ F + +G +VD Sbjct: 16 SLLTAIVTSFALAAISPAYADQTLDKINARHEIAVGVMISGSPFGSLDPQTQQPRGMNVD 75 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + + +Q + + R LQ ++DIL N ++ R L P Sbjct: 76 LANDIGKRLGVK---VQLVSVQPSTRVQFLQQGKVDILIANMEYNAQRGEILDHVPTPYY 132 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 G K GI+ L G +C+ G++ + + + A P F + Sbjct: 133 RVGGTAI-TPKSSGITKWEDLRGKPVCISQGSSYIRPVVEKYGA-----VPRAFPGAPQS 186 Query: 183 DAAYRAHRCDAYTGD-ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A R C A D LY L+ + ++ L + +P + QG+ + + Sbjct: 187 LLALRGGSCVAAVHDAAPLLYPLQQHDPEWRDYRTLQPELEPAPSVIWVRQGEKDTAAKL 246 Query: 242 SWTHYAM 248 Sbjct: 247 DAIVRDW 253 >gi|83589974|ref|YP_429983.1| extracellular solute-binding protein [Moorella thermoacetica ATCC 39073] gi|83572888|gb|ABC19440.1| amino acid ABC transporter substrate-binding protein, PAAT family [Moorella thermoacetica ATCC 39073] Length = 284 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 68/220 (30%), Gaps = 14/220 (6%) Query: 38 CGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 + F G++ GFD+D +A+ D + + ALQ+ Sbjct: 53 VALEATFAPFEFRDMKTGEFTGFDIDLIKAIGQVEGFD---VDIKEMGFDGIITALQTNN 109 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTT 155 +D+ R+ + F Y G + I L G I VQ TT Sbjct: 110 VDLAISGISIDDERKK--AVDFSLPYYQSGLVVAVKADNNTIKGFDDLKGKKIAVQINTT 167 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 + A ++V ++ + DA D+ + + Sbjct: 168 SAKEAKKIPGAM-----VTELDKVPDMFLELKNGGVDAVVNDLPVTAYYIKQGNN--DVK 220 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 I+ DI S A+ +G TE ++ A+ + Sbjct: 221 IVGDIRSAEYYGIAVPKGKTEILQKINDGLKAIKANGQYE 260 >gi|152987979|ref|YP_001345802.1| putative ABC transporter binding protein subunit [Pseudomonas aeruginosa PA7] gi|150963137|gb|ABR85162.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa PA7] Length = 256 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 34/239 (14%), Positives = 67/239 (28%), Gaps = 19/239 (7%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 L+++ + +A +L D+ +RG L+ + F + G GF+ + L++ Sbjct: 7 LLMLVSLAAPLAHAELLDDVHQRGALRIALEGTYPPFNFKQG-GKLTGFETELGELLAAE 65 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 + P ++ LQS + DI R F I Sbjct: 66 LKVRPE---FVTTEWSGILAGLQSGKYDIALNQVSVNEQRRKV--FDFSAPYTISSAQLI 120 Query: 131 MHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 + + S+ L G + V GT + + E + Sbjct: 121 VRADETRQFKSLEDLKGLKLGVGQGTNYADLAKSVA-----GVNVRTYPGAPEYLQDLAS 175 Query: 189 HRCDAYTGDISA--LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 R DA D + + P P + + ++ + Sbjct: 176 KRIDAALNDRLLIPFAIREARLPVKPGAAVGPVANMAIPY----RKNNPKFGEALDAAL 230 >gi|88856306|ref|ZP_01130965.1| secreted protein [marine actinobacterium PHSC20C1] gi|88814390|gb|EAR24253.1| secreted protein [marine actinobacterium PHSC20C1] Length = 305 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 30/231 (12%), Positives = 66/231 (28%), Gaps = 12/231 (5%) Query: 28 GDIKKRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 I++ G + G + + + G D D A+ + + I+ + Sbjct: 56 DRIQESGVITVGTEAYYPPYESFADDDSTIIGLDPDLLHAIGDVLGVE---IKLENMAFD 112 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISSVSQLS 144 AL +K++DI+S + F + QG + + + L Sbjct: 113 GLLPALDAKRLDIVSAALTINA--DRVEKYDFV-TYFNTPQGITVPADNPKGVKTRDDLC 169 Query: 145 GASICVQAGTTTELTLADYFKA--HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 G ++ V + L + + F + ++ R DA Sbjct: 170 GLNVAVLDASHQLSLLEAMNADLCADNEMTITAFTSDADALQQLQSGRADASISQYPVAA 229 Query: 203 ALKLTNDRPSEHVILPDIIS-KSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + D S L + D++ + V ++ + Sbjct: 230 FSAANFGNGKIFTAISDASFGPSLLGEVFRKDDSQLRDAVQAAINDLIESG 280 >gi|253751794|ref|YP_003024935.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis SC84] gi|253753617|ref|YP_003026758.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis P1/7] gi|251816083|emb|CAZ51704.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis SC84] gi|251819863|emb|CAR45878.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis P1/7] gi|319758142|gb|ADV70084.1| amino acid ABC transporter periplasmic protein [Streptococcus suis JS14] Length = 732 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 66/210 (31%), Gaps = 15/210 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + ++ +FF IK + + F ++ +KG D Sbjct: 1 MKKKLLMLLASILPVFFIFTG--------IKADDTIDVVFDNAYAPFEFKDSDQIYKGLD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ ++ A+Q+ D L T T R+ F Sbjct: 53 VDIINEVAKRSGWTMNQ---SFPGFDAAVNAVQAGSADALMAGTTITEARKKV--FTFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + K ISS L G ++ V+ GT + L + + + F+ + Sbjct: 108 PYFDTKIVIATTKANTISSYKDLKGKTVGVKNGTAAQNFLEENKDKYGY--NVKTFDTGD 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + A DA D + + Sbjct: 166 LMYNSLSAGAVDAVMDDEAVIQYAIQQGQD 195 Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 74/242 (30%), Gaps = 15/242 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L T ++ + +K + ++ F +G++ G D++ +A++ Sbjct: 262 LSLTGNASAKATP--VKSSYTIVA--DSSFAPFEYQDESGNYVGIDMELIKAIAE---HQ 314 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 I A+Q+ Q D + T R+ F Y + Sbjct: 315 GFTITIQNPGFDAALNAVQAGQADAVIAGMSITDARKEI--FDFSNAYYTSNILLAVKNG 372 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+S L G ++ + GT + L + Y F+ + + + DA Sbjct: 373 SDIASYEDLKGKTVGAKNGTASYSFLEEN--KSKYGYTLKAFDEASSMYDSLNSGSIDAL 430 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEE 253 D L + A+ +G + E + + A+V + + Sbjct: 431 MDDE---AVLLYAIQQGRNFATPIPGEKSGEYGFAVKKGANPELIEMFNNGLAALVESGK 487 Query: 254 LG 255 Sbjct: 488 YD 489 >gi|289829988|ref|ZP_06547439.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 239 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 83/251 (33%), Gaps = 26/251 (10%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + L L + S +A L G + + V A+ GFD+D A+ Sbjct: 1 MLLASLSVHAASVSART---------LHFGTSATYAPYEFVDADNKIVGFDIDVANAVCK 51 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + ++ + + L+ K+ D + D T RE ++F Y Sbjct: 52 EM---QAECSFTNQSFDSLIPGLRFKKFDAVIAGMDMTPKRE--QQVSFSQPYYEGLSAV 106 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ +K + + L G + ++ G L D P+ ++ + + Sbjct: 107 VVTRKGAYHTFADLKGKKVGLENGNNASAHLQD----KQQAITPVAYDSYLNAFTDLKNN 162 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244 R + GD + A+ ++ I+ + S A+ +G+ ++ Sbjct: 163 RLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKGNDALLQEINAA 219 Query: 245 HYAMVTAEELG 255 + + E Sbjct: 220 LDKVKASPEYA 230 >gi|209519716|ref|ZP_03268504.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] gi|209499860|gb|EDZ99927.1| extracellular solute-binding protein family 3 [Burkholderia sp. H160] Length = 248 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 70/201 (34%), Gaps = 11/201 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L +T V F + + + GFD+D A++ + D + P++ ALQ+ Sbjct: 26 TLLVACDTAFVPFEFKQGD-KYVGFDIDLWEAIAKDLKLDY---KLQPMDFSGILPALQT 81 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 +D+ R+ + F Y G ++ I+ L G S+ ++ GT Sbjct: 82 HNVDVALAGITIKDERKKV--IDFSDGYYDSGFTLMVPATSTINGPDDLKGKSLAIKTGT 139 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + ADY KAH F ++ + R DA D + T + Sbjct: 140 SA----ADYAKAHFAGTDLRQFPNIDNAYLELQTGRVDAAMHDTPNVLYYINTAGKGHVK 195 Query: 215 VILPDIISKSPLAPAIIQGDT 235 + P + +G Sbjct: 196 AVGPQ-MMAQQYGIGFPKGSP 215 >gi|226306803|ref|YP_002766763.1| amino acid ABC transporter amino acid-binding protein [Rhodococcus erythropolis PR4] gi|226185920|dbj|BAH34024.1| putative amino acid ABC transporter amino acid-binding protein [Rhodococcus erythropolis PR4] Length = 322 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 67/210 (31%), Gaps = 14/210 (6%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 + G L+ G+N A+G+ GFDVD A+++ + + + + + Sbjct: 78 KVTDSGKLQVGVNIPYAPNEFKDADGNIVGFDVDLMNAVAAVLGVEA---VFNQADFDKI 134 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 A+QS D+ + + RE + + F Q + + G + Sbjct: 135 IPAIQSGSYDLGMSSFTDSKEREKT--VDFVTYYSAGIQ--WAQRPDKPVDPNNACGLRV 190 Query: 149 CVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 VQ TT + I ++ ++ A R DA + D Sbjct: 191 AVQTTTTEDIDEVPAKSEVCVAEGKPPIDKIKYDSQDDAANALILGRVDALSADSPVTGY 250 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + +P I++G Sbjct: 251 AIKRSK--GRMEAAGEPFDSAPYGWPIVKG 278 >gi|146280414|ref|YP_001170567.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas stutzeri A1501] gi|145568619|gb|ABP77725.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas stutzeri A1501] gi|327478630|gb|AEA81940.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas stutzeri DSM 4166] Length = 285 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 79/274 (28%), Gaps = 13/274 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + ++ L + F S + A L IK ++ G FA +G G + Sbjct: 11 RRLLIACAALASIGFASVT-QADTLEKIKDSNSVRIGYANET-PFAYTALDGSVTGESPE 68 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R + + + I+ + L++ + D+++ T R + Sbjct: 69 IVRKVFERM--EIGTIKPVLTEWGSLIPGLRAGRFDLIAAGMYITPERCKQVLFTDPHYR 126 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 D K + S ++G A + + L KA + Sbjct: 127 LLDTLLVAQGNPKELRSYEDIAGNPEVKIAIMSGTVNLGYARKAGIKDSQILQVPDTTSQ 186 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWYNI 240 A R+ R DA G + L E D A A D + Sbjct: 187 LQAVRSGRADAAIGTQLTMRGLAAKASNDVEAIADFEDDPARAGYGALAFRPQDEALRDA 246 Query: 241 VSWTHYAMVTAEE-------LGITQKNINQVSKD 267 V+ + +EE G + N+ + Sbjct: 247 VNAELKQWLGSEEHLKAVEPFGFDRSNLTDKTAA 280 >gi|182436030|ref|YP_001823749.1| putative arginine/ornithine binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326776654|ref|ZP_08235919.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces cf. griseus XylebKG-1] gi|178464546|dbj|BAG19066.1| putative arginine/ornithine binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326656987|gb|EGE41833.1| ABC-type transporter, periplasmic subunit family 3 [Streptomyces cf. griseus XylebKG-1] Length = 320 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 74/238 (31%), Gaps = 20/238 (8%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +K G +K G N V NG G D D AL + + ++ + Sbjct: 61 EKYQKSGVIKVGTNAEYAPMESV-ENGKIVGVDPDIAEALGKQLG---VRFEFTSGSFDG 116 Query: 88 RFLALQSKQIDILSRNTDWTLLREI---------SLGLAFRPITYFDGQGFIMHK--KKG 136 AL S + DI + R+ G+ F + G K + Sbjct: 117 LITALNSGRHDIAMSSITDNKQRQEGLDDSGKKLGEGVDFVD-YFLAGTAVYTKKGNPQN 175 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCD 192 I S+ L G VQ GTT E L KA FE E ++ Sbjct: 176 IKSIEDLCGKPAAVQRGTTYEEALKKQSKACTDGGEKAIKIESFENDTEAQTRVKSGGSV 235 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A D L D ++ + + P A+ + +T + + A++ Sbjct: 236 AGVNDYPVAVDLARKADGGKAFEVVGEQVDAGPFGIAVKKDNTGLRDALKEAVDAIIA 293 >gi|270307789|ref|YP_003329847.1| amino acid ABC transporter, periplasmic binding protein [Dehalococcoides sp. VS] gi|270153681|gb|ACZ61519.1| amino acid ABC transporter, periplasmic binding protein [Dehalococcoides sp. VS] Length = 260 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 69/217 (31%), Gaps = 14/217 (6%) Query: 36 LKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + + F V +GFD+D +A++ ++ + + + + Sbjct: 41 VTVVTDATWAPFEYVNEQTHAIEGFDIDLMKAIAEKA---NLEVTFQNVAWDALLAGMAT 97 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAG 153 Q + + T R F + GQ + K I S + L+G + Q G Sbjct: 98 GQYKVAISSITITAERAE--KWLFSDPYFNAGQMVCVQKNNTTILSHNDLTGKKVAAQTG 155 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT + A ++ + + DA D A+ N P + Sbjct: 156 TTGFIEAQKIEGA-----TVKSYDEIGLAFQDLMNGQIDAVICDTP--VAIDYVNANPDK 208 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + + ++ +G TE ++ A++ Sbjct: 209 IKKVGTAFTDEYYGISVAKGQTEILARINQGLAAVIA 245 >gi|254975775|ref|ZP_05272247.1| amino-acid ABC transporter,substrate-binding protein [Clostridium difficile QCD-66c26] gi|255093162|ref|ZP_05322640.1| amino-acid ABC transporter,substrate-binding protein [Clostridium difficile CIP 107932] gi|255314904|ref|ZP_05356487.1| amino-acid ABC transporter,substrate-binding protein [Clostridium difficile QCD-76w55] gi|255517578|ref|ZP_05385254.1| amino-acid ABC transporter,substrate-binding protein [Clostridium difficile QCD-97b34] gi|255650689|ref|ZP_05397591.1| amino-acid ABC transporter,substrate-binding protein [Clostridium difficile QCD-37x79] gi|260683776|ref|YP_003215061.1| putative amino-acid ABC transporter substrate-binding protein [Clostridium difficile CD196] gi|260687436|ref|YP_003218570.1| putative amino-acid ABC transporter substrate-binding protein [Clostridium difficile R20291] gi|306520614|ref|ZP_07406961.1| putative amino-acid ABC transporter, substrate-binding protein [Clostridium difficile QCD-32g58] gi|260209939|emb|CBA63913.1| probable amino-acid ABC transporter, substrate-binding protein [Clostridium difficile CD196] gi|260213453|emb|CBE05130.1| probable amino-acid ABC transporter, substrate-binding protein [Clostridium difficile R20291] Length = 267 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 88/248 (35%), Gaps = 12/248 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L L++ + ++ + +++ ++ + FA + KGF+ Sbjct: 1 MKKLKLIIMLALVLALLITGCSSGNNKNK-EEQKTIRVATSGTYYPFAFKDKD-KLKGFE 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF + ++++ + F L++ + D++S T RE AF Sbjct: 59 VDFWDEFAKRTNCK---VEWVLTDFSGLFGLLEADKADVVSAQLTATPEREK--KYAFSD 113 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G I+ + I S+ L G + V G L + + +K + Sbjct: 114 AYNYSGTNIIVREDDTSIKSIDDLVGKKVGVGTGAVANEILKEKYPNDEIKIVNYSSATL 173 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD--TEW 237 + R DA + AL ++ ++ I + AI + + +W Sbjct: 174 KGNYQDLEMGRLDAVVAQD--VEALIAIKEQKLNLKMVEPPIQFGACSFAIQKNEKGEKW 231 Query: 238 YNIVSWTH 245 ++ Sbjct: 232 TKEINEVI 239 >gi|308181821|ref|YP_003925949.1| amino acid ABC transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|308047312|gb|ADN99855.1| amino acid ABC transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 267 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 87/256 (33%), Gaps = 22/256 (8%) Query: 1 MY---KDFFVSILCL-IILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVK 51 M K V++L L + + T+ +N S ++K G L G+ ++ Sbjct: 1 MKSWVKKLGVAVLGLGLAVTLTACGSNTSSSSKSNDLGLQKSGTLTIGLEGTFQPYSYR- 59 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G GF+VD +A++ + +++P L + + D++ N T R+ Sbjct: 60 KDGKLTGFEVDLGKAVAKKMGLKA---KFVPTKFDSLVAGLDTNKFDVVMNNMSETAARK 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F + + K IS ++ + G A TTT D A + Sbjct: 117 K--KYLFSTPYIYSKSQLAVKKNSSISKITDIKGKK---VAETTTSNNATD---AKRLGA 168 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAI 230 + ++ R + YA N + + +I D I+ + + Sbjct: 169 TITPTDSFQQSIDLVSQGRVAGTINSRESFYAYFKQNPKANIKLIDSGDHIASQKIGAIV 228 Query: 231 IQGDTEWYNIVSWTHY 246 + + +S Sbjct: 229 TKQHPKMQKQISKAIQ 244 >gi|293396874|ref|ZP_06641148.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] gi|291420345|gb|EFE93600.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] Length = 255 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 75/208 (36%), Gaps = 12/208 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 ++ L+ + F + AN GFD+D +AL + ++ + Sbjct: 29 VQAAETLRFASSATYPPFESLDANNQIVGFDIDLAKALCKQM---QTECTFTNQAFDSLI 85 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 AL+ K+ D + D T R S ++F Y + I K ++++ L G + Sbjct: 86 AALKFKKYDAVISGMDITPER--SKQVSFTQPYYANSAIVIAQKG-KYATLADLKGKKVG 142 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 ++ GTT + + D + + ++ + + R D GD + + +N Sbjct: 143 MENGTTHQKYMQDKHPE----INTVAYDSYQNAILELKNGRVDGVFGDTAVVNEWLKSNP 198 Query: 210 R--PSEHVILPDIISKSPLAPAIIQGDT 235 P I + L A+ + Sbjct: 199 NLAPVGEHITDAQYFGTGLGIAVRPDNQ 226 >gi|284043463|ref|YP_003393803.1| extracellular solute-binding protein family 3 [Conexibacter woesei DSM 14684] gi|283947684|gb|ADB50428.1| extracellular solute-binding protein family 3 [Conexibacter woesei DSM 14684] Length = 302 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 72/207 (34%), Gaps = 8/207 (3%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86 I+ +G L + V +G G DVD +A+ + D ++ Sbjct: 59 EAIRSKGKLVVATDPTYAPNEFVDRDGKTIIGMDVDLAKAIGQQLGLD---VEVQKATFD 115 Query: 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146 L +++ D+ + T RE + F ++ I+++ + G Sbjct: 116 AIIPGLAARRYDLGMSSF--TDTRERERTVDFVTYFNAGTSFYVRTGGPDITTLEDVCGE 173 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 + V+ GTT + + ++ + V+ + A ++ R D S + A + Sbjct: 174 KVAVEKGTTQAMDVQRQNRSCDTPADLQVYPDQNGANLAIQSGRAD-VGMADSPVAAYIV 232 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQG 233 + + + +P A+ +G Sbjct: 233 KQSNG-QFRLDGEPYGTAPYGIAMPKG 258 >gi|120608918|ref|YP_968596.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120587382|gb|ABM30822.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 274 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 65/179 (36%), Gaps = 8/179 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 +L +I+K G ++ I F + + +G+D+D ++ + ++ +P+ Sbjct: 39 DVLANIQKAGVVRVAIPQDFPPFGSLGTDLKLQGYDIDMANLVAKELGVK---VELVPVT 95 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + R L + + D++ + R + F + K+ I + L+ Sbjct: 96 STNRIPYLTTGKADLVISSLGKNAERAKV--IDFTQAYAPFPKSVYGPKEAAIKGPADLA 153 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G +I V G+T +L+L A +E +Y + T A Sbjct: 154 GKTIGVTRGSTEDLSLTKLAPA---SATIKRYEDNNATAQSYLTGQVQLVTLGNIVANA 209 >gi|225868288|ref|YP_002744236.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus equi subsp. zooepidemicus] gi|225701564|emb|CAW98789.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus equi subsp. zooepidemicus] Length = 721 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 66/211 (31%), Gaps = 17/211 (8%) Query: 1 MYKDFFV-SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + L ++ T+ +A + + +T F ++ +KG Sbjct: 1 MKNTLKAWMLAMLSVVLMTAGIASAETIDIV---------SDTAYAPFEFKDSDQVYKGI 51 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD ++ + I A+QS Q D L T T R+ F Sbjct: 52 DVDIINEVAKRKGWN---INMTFPGFDAAVNAIQSGQADALMAGTTITAARQKV--FHFS 106 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y K I S+L G ++ V+ GT + L Y K++ F+ Sbjct: 107 DPYYDTKIVIATRKASPIKKYSELKGKTVGVKNGTAAQAFLDKYKKSYGY--TVKTFDTG 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + DA D + Sbjct: 165 DLMYNSLATGSIDAVMDDEPVIQYAINQKQD 195 Score = 87.1 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 65/222 (29%), Gaps = 11/222 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 K ++ F +G++ G D+D +A++ I+ A+Q+ Sbjct: 271 VYKIVADSSFAPFEFQIGSGEYVGIDMDLIKAIAKQ---QGFTIEISNPGFDAALNAVQA 327 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 Q D + T R F Y + I S L G + + GT Sbjct: 328 GQADAVIAGMSITPAR--REIFDFSDSYYTSNIRLGVKSGSSIKSYKDLKGKIVGAKKGT 385 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + L + F+ + + + D D L+ R + Sbjct: 386 ASYDFLESNKDIYGY--RLKAFDEASSMYDSLNSGSIDGLMDDE---AILRYAIQRGHKL 440 Query: 215 VILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEELG 255 I A+ +G + E + + A+ + + Sbjct: 441 DIPIKGEPSGEYGFAVKKGANPELIEMFNNGLAALKASGKYD 482 >gi|27379672|ref|NP_771201.1| cyclohexadienyl dehydratase [Bradyrhizobium japonicum USDA 110] gi|27352824|dbj|BAC49826.1| probale cyclohexadienyl dehydratase precursorr [Bradyrhizobium japonicum USDA 110] Length = 260 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 82/260 (31%), Gaps = 13/260 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWK 57 M F ++ +++ ++ + A S L +I KRG L+ G+ F + A + Sbjct: 1 MTVRFLSALAVALLMNLSAHAQQAAPSRLDEIMKRGTLRVGMTGDYKPFTYLDKATQQFS 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFDVD AL A+ ++++P + ++ Q DI TL R+ + Sbjct: 61 GFDVDMAEALGKALGVK---VEFVPTAWPKLMKDFEADQFDIAMGGVSVTLDRQRKGFFS 117 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + ++ + G + V G T E + +A+ V Sbjct: 118 MPIMREGKTPIARCADVGKYQTLPDIDKKGTRVIVNPGGTNE----RFARANIKDADITV 173 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F I D D S + + V S A + Q D Sbjct: 174 FADNTVIFDEIAKGNADLMMTDASETRYQQKQHQGVLCAVHPEKPFDFSEKAYWL-QRDM 232 Query: 236 EWYNIVSWTHYAMVTAEELG 255 V + + Sbjct: 233 ALKAFVDQWLHISMEDGSYR 252 >gi|116492831|ref|YP_804566.1| ABC-type amino acid transport system, permease and periplasmic component [Pediococcus pentosaceus ATCC 25745] gi|116102981|gb|ABJ68124.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Pediococcus pentosaceus ATCC 25745] Length = 483 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 41/274 (14%), Positives = 83/274 (30%), Gaps = 25/274 (9%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K + ++ILF S + ++ D K + G + F + G D+ Sbjct: 5 KKTLLSIVFSIVILFGWSVFNSNNVNADEK---VYEIGTDVTFPPFEFANDQNQYVGIDM 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D R ++ ++ K++ P+ AL + Q+D + T T R+ + F Sbjct: 62 DIIRTIAK---NEGFKVKIKPVGFNAAVQALDAGQLDGVIAGTTITDERK--QKMDFSAP 116 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + G + + I + L G + ++ GT K + K + F+ Sbjct: 117 YFKTGVVMAVGQNSSIKNFQDLKGKRVAIKTGTAAGDYAKSIQKKYGFKT--VTFDDSNN 174 Query: 182 IDAAYRAHRCDAYTGDISALYALK---------LTNDRPSEHVILPDIISKSPL------ 226 + A D + + L Sbjct: 175 VYNDVTTGNSVACFEDQPVMQYAIKTGAKLKIVTKPANGGAYGFSVKKGHNQELLKKFDA 234 Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260 I+ + ++ IV+ A A + +N Sbjct: 235 GLKKIKSNGQYKKIVAKYLGASAVASQKAHKTQN 268 >gi|241894752|ref|ZP_04782048.1| glutamate superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] gi|241871964|gb|EER75715.1| glutamate superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] Length = 483 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 87/278 (31%), Gaps = 23/278 (8%) Query: 1 MYKDFFVSILCLIILF---FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K + + + +S + +A+ +T F NG ++ Sbjct: 1 MRKWLISLMALVGLAVGIVVSSPAVHAATPNY-------TITTDTTFPPFEFQTDNGKYR 53 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D+D + +S + P++ A+Q+ Q+D + T R+ Sbjct: 54 GIDMDMLKEISKR---EHFTYTLKPMSFNAGVQAVQAGQVDGIVAGMSITDERK--NTFD 108 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y G + +K I +S L G ++ + G+ + K + K F Sbjct: 109 FGTPYYKSGIVMAVSQKSKIKGLSDLKGKTVAAKTGSAGADYAREMSKKYGFK--VTFFN 166 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDR------PSEHVILPDIISKSPLAPAII 231 + A D + P++ + KS A + Sbjct: 167 DSNTMYNDVLIGNTVAVFEDQPVMAYAIQQGTNLKIVTKPAKGNWYGFGVKKSANAELLK 226 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + + + IV Y + LG N + + + T Sbjct: 227 KFNAGYAEIVKDGTYDKIVNRYLGKGGYNYKKNAANQT 264 >gi|239979644|ref|ZP_04702168.1| bifunctional protein [Streptomyces albus J1074] Length = 640 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 34/239 (14%), Positives = 79/239 (33%), Gaps = 5/239 (2%) Query: 19 SFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + + + L+ G+ + + +G+++GFD+ A++ A+ + Sbjct: 380 AATAAEKRWEKWRSDNEVLRVGVKKDQPQLS-EEKDGEYQGFDISMALAIAKALGYEKGD 438 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + ++P+N + R L +K+ ++ + T RE + F + G+ F++ +K Sbjct: 439 VLFVPVNTENRSTMLDNKRAHLIVASYSITDEREK--EVDFVGPYFRAGRTFLVREKSTQ 496 Query: 138 SSVSQLSGASICVQAGTT-TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + + T T + K K + E D Y Sbjct: 497 YDLRSAADIKQKDVRVCTAAHSTYERHLKEGGYKAYAPQPASYETCVDKLLDETADVYAV 556 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L ++ + +L A+ D V ++T+ E Sbjct: 557 ASDDVLLAGLAYEKRGQVRLLDSGAGTEEYGVAMRPEDQPLKGKVCTALRQIITSGEWD 615 >gi|229589723|ref|YP_002871842.1| putative ABC transporter exported solute-binding protein [Pseudomonas fluorescens SBW25] gi|229361589|emb|CAY48466.1| putative ABC transport system, exported solute-binding protein [Pseudomonas fluorescens SBW25] Length = 281 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 90/237 (37%), Gaps = 12/237 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 + + LI+L ++ + A L I++R L G+ F + +G Sbjct: 9 KRLLPAMLGALILLAASTTAAQADATLDKIEQRHVLVVGVLLSGGPFGGIDPATQKPRGL 68 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +V+ + L + + +Q +P+ R LQ ++D+L N +WT R LG Sbjct: 69 NVELAQELGRQLGAE---VQLVPVLPANRVQFLQQGKVDLLIANMEWTPERGEILGFVPT 125 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 P G ++ K I+ L G +C G++ L + + F+ Sbjct: 126 PFYRVGGTAAVL-KDSKITRWEDLKGQPVCTSQGSSYVKPLTE------LGVELKAFKSS 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E A R + C A D + + L + + + ++ +P +G+++ Sbjct: 179 SESLLALRGNNCVAAVHDATLVNPLIADSAEWQGYRTITPELNPAPSVIWTRRGESD 235 >gi|161506742|ref|YP_001576692.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus helveticus DPC 4571] gi|160347731|gb|ABX26405.1| Glutamine ABC transporter substrate binding/permease protein [Lactobacillus helveticus DPC 4571] Length = 494 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 36/264 (13%), Positives = 86/264 (32%), Gaps = 29/264 (10%) Query: 1 MYK----DFFVSILCLIILFF-----TSFS----TNASILGDIKKRGFLKCGINTGLVGF 47 M + F++ + +I F + + + S++ IK+ L G + Sbjct: 1 MKNAKIVNLFLAFITIISTLFLFNQPVAAADKKVASDSVMKKIKQSKELVVGTSADYPPL 60 Query: 48 AE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 V N + G D++ + ++ + +K+ ++ +AL++ ++D++ Sbjct: 61 EFTTSVNGNTKYVGVDIELAKDIAKDL---HAKLVIKNMSFDSLLVALETGKVDMVISAM 117 Query: 105 DWTLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 R+ + F I Y + + +G ++ Q G+ + Sbjct: 118 TPNPERKK--SVDFSQIYYKPSGEYFLINKRDQTKYKKIKDFAGQTVGAQTGSIQYQLIQ 175 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 K K ++ + A ++ + + ND V Sbjct: 176 SQMKKSKAKG----LGKINNLVLALKSGKMSGVVMEE-LTVKAYAKNDNSLMAVRSDLRE 230 Query: 222 SKSPLAPAIIQGDTEWYNIVSWTH 245 ++ A AI +G V+ T Sbjct: 231 EQAGNAVAIAKGQPGLVKAVNKTI 254 >gi|146320886|ref|YP_001200597.1| amino acid ABC transporter periplasmic protein [Streptococcus suis 98HAH33] gi|145691692|gb|ABP92197.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus suis 98HAH33] Length = 734 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 66/210 (31%), Gaps = 15/210 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + ++ +FF IK + + F ++ +KG D Sbjct: 3 MKKKLLMLLASILPVFFIFTG--------IKADDTIDVVFDNAYAPFEFKDSDQIYKGLD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ ++ A+Q+ D L T T R+ F Sbjct: 55 VDIINEVAKRSGWTMNQ---SFPGFDAAVNAVQAGSADALMAGTTITEARKKV--FTFSD 109 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + K ISS L G ++ V+ GT + L + + + F+ + Sbjct: 110 PYFDTKIVIATTKANTISSYKDLKGKTVGVKNGTAAQNFLEENKDKYGY--NVKTFDTGD 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + A DA D + + Sbjct: 168 LMYNSLSAGAVDAVMDDEAVIQYAIQQGQD 197 Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 74/242 (30%), Gaps = 15/242 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L T ++ + +K + ++ F +G++ G D++ +A++ Sbjct: 264 LSLTGNASAKATP--VKSSYTIVA--DSSFAPFEYQDESGNYVGIDMELIKAIAE---HQ 316 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 I A+Q+ Q D + T R+ F Y + Sbjct: 317 GFTITIQNPGFDAALNAVQAGQADAVIAGMSITDARKEI--FDFSNAYYTSNILLAVKNG 374 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+S L G ++ + GT + L + Y F+ + + + DA Sbjct: 375 SDIASYEDLKGKTVGAKNGTASYSFLEEN--KSKYGYTLKAFDEASSMYDSLNSGSIDAL 432 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEE 253 D L + A+ +G + E + + A+V + + Sbjct: 433 MDDE---AVLLYAIQQGRNFATPIPGEKSGEYGFAVKKGANPELIEMFNNGLAALVESGK 489 Query: 254 LG 255 Sbjct: 490 YD 491 >gi|126665866|ref|ZP_01736847.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Marinobacter sp. ELB17] gi|126629800|gb|EBA00417.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Marinobacter sp. ELB17] Length = 252 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 77/247 (31%), Gaps = 21/247 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59 M K + ++ ++L + + +A LK + V F + G+ GF Sbjct: 1 MSKKWLKTLTAGLVLTVAAGTVSAE---------KLKIATDPSFVPFEMLDIETGEMIGF 51 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D++ ++ + ++ ALQ+ IDI T R + F Sbjct: 52 DMEMIAEVAKRAGFEYD---MNTMDFNGIIPALQTGSIDIAIAGITITEARGKI--VDFS 106 Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ I L G I + G+T+ L + + Sbjct: 107 DPYYDSGLRLLVRVDNNEILEFKDLEGKKIGSKIGSTSYDYLTGNLE---DSAGVTPYPG 163 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 ++ A + DA D A + + + A+ + +EW Sbjct: 164 SADMYLALMSGAVDAVFYDAP-NVAYFARTKGEGKVKTVGALYEGQQYGIAL-KAGSEWV 221 Query: 239 NIVSWTH 245 + V+ Sbjct: 222 DEVNTAL 228 >gi|308067589|ref|YP_003869194.1| Glutamine transport system permease protein glnP [Paenibacillus polymyxa E681] gi|305856868|gb|ADM68656.1| Glutamine transport system permease protein glnP [Paenibacillus polymyxa E681] Length = 482 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 88/279 (31%), Gaps = 13/279 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L + + F + + N ++ + + G +T F +G + G D Sbjct: 1 MQKSRKLIVLMICLFFVVALAGNFGVVAHAENKTKYDIGTDTTFAPFEFEDVDGKFVGID 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + PL AL++ Q+D + T R+ F Sbjct: 61 MDLLAAIAKD---QNFEYTIKPLGFNAAVQALETNQVDGVIAGMSITDERKR--KFDFSE 115 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K + L G + V+ GT + + F+ Sbjct: 116 PYFDSGVVMAVRKDNDTVKRYEDLKGQRVAVKTGTEGYTFAESI--KAKYGFTTVPFDDS 173 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE--W 237 ++ + A D L N+ ++ D + A+ QG + Sbjct: 174 SQMYDEVKTGNSVACFDDYPVLAYGVNQNNG---LKLVTDKEKGASYGFAVNQGKNQELL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 + + E I K + + K + R+ Sbjct: 231 EKFNAGLVNLRNSGEYDKILAKYLGESGKGVAPVETSRW 269 >gi|148545937|ref|YP_001266039.1| extracellular solute-binding protein [Pseudomonas putida F1] gi|148509995|gb|ABQ76855.1| extracellular solute-binding protein, family 3 [Pseudomonas putida F1] gi|313497022|gb|ADR58388.1| Extracellular solute-binding protein [Pseudomonas putida BIRD-1] Length = 273 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 35/250 (14%), Positives = 76/250 (30%), Gaps = 23/250 (9%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 + + + L ++ R + + F+ + + G+DVD +A++ + Sbjct: 16 TATQAFAGATLERVESRKEMVNVLMESYPPFSFLNDHNQLDGYDVDVAKAVADKLGVK-- 73 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK- 135 ++ + S + DI + + R F Y +++ Sbjct: 74 -LRLETPSWDVIAAGRWSGRYDICICSMTPSKARAEV--FDFPVEYYASPAVIVVNASDE 130 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI----------VFERVEEIDAA 185 I L G + + ++ E L + I ++ Sbjct: 131 RIHGAKDLEGRKVGSISASSYESYLNKNLVIEGKEDQKIDYPFDFVQAAPYDTENVAFQD 190 Query: 186 YRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R DA + L + + + + + P A AI +GD EW V Sbjct: 191 LGLGTGVRLDAIITN---LVTAQPRLQQDKRFKLAGAPLYEEPNAVAIEKGDPEWDAKVR 247 Query: 243 WTHYAMVTAE 252 +A + A+ Sbjct: 248 QV-FAELKAD 256 >gi|310767148|gb|ADP12098.1| Arginine-binding periplasmic protein 2 [Erwinia sp. Ejp617] Length = 243 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 82/247 (33%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + + ++ + F + GFD Sbjct: 1 MKKIVLAALLASVAFATHAAE-------------KIRFASSATYPPFESLNGENQIIGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + ++ + AL+ ++ D + D T R S ++F Sbjct: 48 IDLANALCAQM---KAECSFSNNPFDSLVPALKFRRYDAVISGMDITTER--SKQVSFTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K S+++QL G + V+ GTT + L + + ++ + Sbjct: 103 PYYANSAIVIAQK-NKFSTIAQLKGKRVGVENGTTHQKYLQEKHPE----MITVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238 + R + GD + + A TN + I + + A+ + + Sbjct: 158 NAILDLKNGRLEGILGDSAVVGAWLKTNANLATVGEHITDSDFFGTGVGIAVRKDNQALL 217 Query: 239 NIVSWTH 245 N + Sbjct: 218 NQFNAAI 224 >gi|291451510|ref|ZP_06590900.1| pknB-group protein kinase [Streptomyces albus J1074] gi|291354459|gb|EFE81361.1| pknB-group protein kinase [Streptomyces albus J1074] Length = 657 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 34/239 (14%), Positives = 79/239 (33%), Gaps = 5/239 (2%) Query: 19 SFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + + + L+ G+ + + +G+++GFD+ A++ A+ + Sbjct: 397 AATAAEKRWEKWRSDNEVLRVGVKKDQPQLS-EEKDGEYQGFDISMALAIAKALGYEKGD 455 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + ++P+N + R L +K+ ++ + T RE + F + G+ F++ +K Sbjct: 456 VLFVPVNTENRSTMLDNKRAHLIVASYSITDEREK--EVDFVGPYFRAGRTFLVREKSTQ 513 Query: 138 SSVSQLSGASICVQAGTT-TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 + + T T + K K + E D Y Sbjct: 514 YDLRSAADIKQKDVRVCTAAHSTYERHLKEGGYKAYAPQPASYETCVDKLLDETADVYAV 573 Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + L ++ + +L A+ D V ++T+ E Sbjct: 574 ASDDVLLAGLAYEKRGQVRLLDSGAGTEEYGVAMRPEDQPLKGKVCTALRQIITSGEWD 632 >gi|160913602|ref|ZP_02076292.1| hypothetical protein EUBDOL_00078 [Eubacterium dolichum DSM 3991] gi|158434063|gb|EDP12352.1| hypothetical protein EUBDOL_00078 [Eubacterium dolichum DSM 3991] Length = 252 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 84/239 (35%), Gaps = 20/239 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + ++L + K++ L N+G + V G+ GFD Sbjct: 1 MKKLLSMCFVAAMLLAGCGG-------EESKEKEKLTVLTNSGYPPYEVVDNKGNLSGFD 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + I+ ++ ++Q+ + D+ T E + F Sbjct: 54 IDIINAIAEETGYE---IEIKDVDFDTLIPSIQTGKADMAIAG--ITPSAERRKKVDFSE 108 Query: 121 ITY---FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + + + +K GI+S L G +I Q GT + + K + Sbjct: 109 VYFSGETSQNYLLYSEKNGITSQDDLKGKTIGCQMGTVQYEAALHFEETQGAKVDAK--K 166 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDT 235 I A + DA + + A++ + + P ++V + + A +G Sbjct: 167 DYAAIVAELKKGNNDAAIVEKA--VAMEFSEENPDFKYVKINGLADLEGNAICFKKGSP 223 >gi|139438499|ref|ZP_01772015.1| Hypothetical protein COLAER_01007 [Collinsella aerofaciens ATCC 25986] gi|133776038|gb|EBA39858.1| Hypothetical protein COLAER_01007 [Collinsella aerofaciens ATCC 25986] Length = 682 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 90/245 (36%), Gaps = 13/245 (5%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 V++ I S S NAS + + G + F V +G+ +GF + Sbjct: 26 TIVVALATTIGASGCSSSQNASSTYTLVENGKFTVASDLATPPFEYVNDSGEDQGFTYEL 85 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSK-QIDILSRNTDWTLLREISLGLAFRPIT 122 ++ + + + + + ++ + D+ + N T R+ + F Sbjct: 86 MGMIADELGLELNYLPAQKFDG--IIPMVKQGVKTDVGACNITITDERKK--EVDFTDPY 141 Query: 123 YFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 QG + K G ++V L G I VQ+GTT+E ++ + + + F+ Sbjct: 142 IDSNQGVAVAKNTGYNTVDSLNAPGVKIAVQSGTTSE----EWAIENLPQATTVNFDDWT 197 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 A + +C A D+ + ++ + I+ ++ + A+ + + E Sbjct: 198 AAFTAVMSSQCQAVVCDLP--VEQWMVSNSFTGMEIIKEVPTGEQFGIAVSKDNPELTQA 255 Query: 241 VSWTH 245 ++ Sbjct: 256 INDAL 260 >gi|26987393|ref|NP_742818.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Pseudomonas putida KT2440] gi|24982049|gb|AAN66282.1|AE016256_9 amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Pseudomonas putida KT2440] Length = 275 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 35/250 (14%), Positives = 76/250 (30%), Gaps = 23/250 (9%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 + + + L ++ R + + F+ + + G+DVD +A++ + Sbjct: 18 TATQAFAGATLERVESRKEMVNVLMESYPPFSFLNDHNQLDGYDVDVAKAVADKLGVK-- 75 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK- 135 ++ + S + DI + + R F Y +++ Sbjct: 76 -LRLETPSWDVIAAGRWSGRYDICICSMTPSKARAEV--FDFPVEYYASPAVIVVNASDE 132 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI----------VFERVEEIDAA 185 I L G + + ++ E L + I ++ Sbjct: 133 RIHDAKDLEGRKVGSISASSYESYLNKNLVIEGKEDQKIDYPFDFVQAAPYDTENVAFQD 192 Query: 186 YRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 R DA + L + + + + + P A AI +GD EW V Sbjct: 193 LGLGTGVRLDAIITN---LVTAQPRLQQDKRFKLAGAPLYEEPNAVAIEKGDPEWDAKVR 249 Query: 243 WTHYAMVTAE 252 +A + A+ Sbjct: 250 EV-FAELKAD 258 >gi|317054111|ref|YP_004118136.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316952106|gb|ADU71580.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 256 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 78/220 (35%), Gaps = 12/220 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 + + L+ G++ F A+G +GFD+D A+ + K Q++ + Sbjct: 21 QAQQTLRLGVDPTFPPFESKAADGSLEGFDIDLGNAICAQA---KVKCQWVEMGFDSSIP 77 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASIC 149 ALQ+K+ D + T R +AF + Y + +++ L G +I Sbjct: 78 ALQAKKFDAILSAMSMTEKR--RQQVAFTDMLYNTPSALLAPAASKLTTDVATLRGKTIG 135 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V GT E + + + + E+ A R D + + LT Sbjct: 136 VAQGTIQETYAKTKWAPEG--VNVVSYPNQMEVYPDLIAGRLDGSLSNAVSAEQGFLTKP 193 Query: 210 RPSEHVILPDIISKSPL----APAIIQGDTEWYNIVSWTH 245 ++ I + K A+ +GD +++ Sbjct: 194 EGKDYAIKGTLTDKKIFGDGVGIALRKGDEANLKMINAAL 233 >gi|239944223|ref|ZP_04696160.1| putative arginine/ornithine binding protein [Streptomyces roseosporus NRRL 15998] gi|239990679|ref|ZP_04711343.1| putative arginine/ornithine binding protein [Streptomyces roseosporus NRRL 11379] gi|291447695|ref|ZP_06587085.1| secreted protein [Streptomyces roseosporus NRRL 15998] gi|291350642|gb|EFE77546.1| secreted protein [Streptomyces roseosporus NRRL 15998] Length = 320 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 76/238 (31%), Gaps = 20/238 (8%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +K G +K G N V NG G D D AL + ++ + Sbjct: 61 EKYQKSGVIKVGTNAEYAPMESV-ENGKIVGVDPDLAEALGKQLGVK---FEFTSGSFDG 116 Query: 88 RFLALQSKQIDILSRNTDWTLLREI---------SLGLAFRPITYFDGQGFIMHK--KKG 136 AL S + DI + R+ G+ F + G K + Sbjct: 117 LITALNSGRHDIAMSSITDNKQRQEGLDDAGKKLGPGVDFVD-YFLAGTAVYTKKGNPQN 175 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH----PIVFERVEEIDAAYRAHRCD 192 I+S+ L G VQ GTT E L KA FE E ++ Sbjct: 176 INSIEDLCGKRAAVQRGTTYEEALKKQSKACTDGGEKAITIEPFENDTEAQTRVKSGGAV 235 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A D L D + ++ + + P A+ +G+T + + A++ Sbjct: 236 AGVNDYPVAVDLARKADGGNAFEVVGEQVDAGPFGIAVKKGNTGLRDALKEAVDAIIA 293 >gi|227894251|ref|ZP_04012056.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] gi|227863971|gb|EEJ71392.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] Length = 494 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 37/270 (13%), Positives = 91/270 (33%), Gaps = 35/270 (12%) Query: 1 MYK----DFFVSILCLIILFFTSFST---------NASILGDIKKRGFLKCGINTGLVGF 47 M K + ++ + LI F + + S++ IK+ L G + Sbjct: 1 MKKAKIINLLLAFITLISTLFLFNQSTYAATKKVESGSVMKKIKQSKELVVGTSADYPPL 60 Query: 48 AE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 V N + G D++ + ++ + +K+ ++ +AL++ ++D++ Sbjct: 61 EFTTSVNGNTKYVGVDIELAKDIAKDL---HAKLVIKNMSFDSLLVALETGKVDMVISAM 117 Query: 105 DWTLLREISLGLAFRPITYFD---GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLA 161 R+ + F I Y + +S +G ++ Q G+ + Sbjct: 118 TPNPERKK--SVDFSKIYYKPSGEYFLINKRDQAKYKKISDFAGKTVGAQTGSIQYQLIQ 175 Query: 162 DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII 221 K K ++ + A ++++ + A + + ++ Sbjct: 176 SQMKKSKAKG----LGKINNLVLALKSNKMSGVVVEELIAKAYQSNDSS----LLAVKSD 227 Query: 222 SKSPL---APAIIQGDTEWYNIVSWTHYAM 248 + P A AI +G + V+ T + Sbjct: 228 LREPQAGNAVAIAKGQPDLVKAVNKTINHV 257 >gi|226359768|ref|YP_002777546.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4] gi|226238253|dbj|BAH48601.1| putative ABC transporter substrate-binding protein [Rhodococcus opacus B4] Length = 329 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 80/218 (36%), Gaps = 11/218 (5%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +I+ RG L ++ F+ G GF VD R ++ + DP+K+++ PL + + Sbjct: 89 EIRARGSLVVAVDQNTNLFSFRDPTTGTLTGFGVDLAREVARDLLGDPAKVEFRPLGSGD 148 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 L + D++ R L E +AF + + ++ GIS + L+ Sbjct: 149 GAEMLAHRDADMIVRPVA--LPCESPQDVAFSTVYLETPRRLVVRVGSGISEPADLARRR 206 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +C + L+ + ++ A + + DA G + L L Sbjct: 207 VCTHDDPASVSALSRIAPKA----TIVAVPDWDDCLMAIQQRQVDAVVG-AALLAGLVAQ 261 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + I+ + A A+ G + V+ T Sbjct: 262 DPN---LDIVGPDSDSARYAIALAPGRDDLVRFVNGTL 296 >gi|218438819|ref|YP_002377148.1| polar amino acid ABC transporter inner membrane protein [Cyanothece sp. PCC 7424] gi|218171547|gb|ACK70280.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7424] Length = 513 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 63/211 (29%), Gaps = 14/211 (6%) Query: 37 KCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 K F N G+ GFD+D +A+ KI++ L ALQ+ Sbjct: 43 KVATEPAFPPFEMTDQNTGELTGFDIDLMKAIGEEAG---LKIEFESLPFDGIIPALQAG 99 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGT 154 ++ T R + ++F + G + I+S L I VQ GT Sbjct: 100 TVEAAISGMTITPER--AQTISFSRPYFKAGLAIAVRDNNNTINSFEDLKNKKIAVQIGT 157 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T F+ + DA D + Sbjct: 158 TGAKQAGQI-----EGVELSTFDSAVLALQELVNGKVDAVVNDAPVTL-YAIKTAGLKGV 211 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 ++ +++++ A+ + + ++ Sbjct: 212 KVVGELVTEEYYGIALPKDSP-YLQKINDAL 241 >gi|171317760|ref|ZP_02906941.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] gi|171097044|gb|EDT41899.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria MEX-5] Length = 262 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 29/256 (11%), Positives = 74/256 (28%), Gaps = 22/256 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + L + ++ ++ +G GF Sbjct: 3 MKQWMTALAVALAAGSVHAGDWTG---------KEIRLAVDPTYPPLEYKLPDGTLTGFG 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + ++ ++ + L +++ D ++ + T R +AF Sbjct: 54 IDITNALCAEL---KARCVWVESSFDGMIPGLLARKFDAIASSMTITPKR--MQQIAFTN 108 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I K + + L G + V+ G+ ++ + ++ Sbjct: 109 RISNAPARLIARKGSPLLPTADSLKGKRVGVEQGSAQADYAVANWQPTG--VQVVSYQNQ 166 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +++ A R DA A L + + + I + + D Sbjct: 167 DQVYADLVTGRLDAAFQASIAASDGFLKKPQGKDFMFAGAPIDDVKYFGQGDGLGLRKQD 226 Query: 235 TEWYNIVSWTHYAMVT 250 + + A++ Sbjct: 227 NDLREAFNRALAAILA 242 >gi|170702161|ref|ZP_02893069.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia ambifaria IOP40-10] gi|172064317|ref|YP_001811968.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia ambifaria MC40-6] gi|170132927|gb|EDT01347.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia ambifaria IOP40-10] gi|171996834|gb|ACB67752.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia ambifaria MC40-6] Length = 260 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 77/224 (34%), Gaps = 13/224 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K ++ G++ F A+G GFDVD + + +K ++ + Sbjct: 23 KDWTTVRFGVDASYPPFESKDASGKVVGFDVDLGNEICRRM---NAKCVWIENDFDGMIP 79 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149 AL++++ D + + T R+ + F + + K G+ + L G SI Sbjct: 80 ALKARKFDGVLSSMSMTPARQEQIA--FSEKLFNTPTRLVTKKGSGLMPTAESLKGKSIG 137 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ GT E Y+ A + ++ +++ A A R D D L Sbjct: 138 VEQGTIQETYAKTYWAAKG--VKVVPYQNQDQVYADLIAGRLDGALQDAVQAEIGFLKTP 195 Query: 210 RPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248 R + I + + + DT+ + M Sbjct: 196 RGANFDFAGKDIDDPKTLGNGAGIGLRKEDTDLKAKIDSAITGM 239 >gi|116496268|ref|YP_808002.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei ATCC 334] gi|191639796|ref|YP_001988962.1| Glutamine-binding protein / Glutamine transport system permease protein [Lactobacillus casei BL23] gi|227532736|ref|ZP_03962785.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239630724|ref|ZP_04673755.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] gi|116106418|gb|ABJ71560.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus casei ATCC 334] gi|190714098|emb|CAQ68104.1| Glutamine-binding protein / Glutamine transport system permease protein [Lactobacillus casei BL23] gi|227189570|gb|EEI69637.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239527007|gb|EEQ66008.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] gi|327383908|gb|AEA55384.1| Arginine/histidine ABC superfamily ATP binding cassette transporter permease [Lactobacillus casei LC2W] gi|327387089|gb|AEA58563.1| Arginine/histidine ABC superfamily ATP binding cassette transporter permease [Lactobacillus casei BD-II] Length = 486 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 89/297 (29%), Gaps = 25/297 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++ L++ + G + F N + G D+D Sbjct: 6 KWCVAGVMALMLAVVLGSPVSTQAAEK-----TYVIGTDVTYAPFEFADKNNQYVGIDID 60 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 +A++ A + K+ PL AL++ QID + T R A Sbjct: 61 LMQAIAKA---EGFKVDIKPLGFNAAVQALEANQIDGVIAGMQITPER--QQKFAMSDPY 115 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Y + + + S+ L G + ++ GT + + F+ + Sbjct: 116 YKTAVAMAVGQNSEVKSLKDLRGKRVALKTGTAAADYALSL--KAKYGFTTVTFDDSNNM 173 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE------ 236 A D L T + + S A + ++ Sbjct: 174 YQDVITGNSVACFDDKPVLQYAIAT---GLKLKLAGPESKASYYGFATQKDRSDHLDQRF 230 Query: 237 ---WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALG 290 + + YA + A+ LG + + + T + FLG+ + N G +G Sbjct: 231 NAGLKKVKADGTYAKIVAKYLGNGTQAAQKQTSAKTQDSDRSFLGLLRE-NWGTLMG 286 >gi|94992157|ref|YP_600256.1| arginine-binding protein [Streptococcus pyogenes MGAS2096] gi|94545665|gb|ABF35712.1| Arginine-binding protein [Streptococcus pyogenes MGAS2096] Length = 278 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 78/262 (29%), Gaps = 17/262 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASIL---GDIKKRGFLKCGINTGLVGFAE---VKANGD 55 +K L ++L+ + + L IKK L ++ F V Sbjct: 11 FKKIRFGFLLCLLLYPLAACNKSEQLNHYERIKKTRKLVVAVSPDYAPFEFKALVNGKDT 70 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G DV +A++ + D ++ P++ +LQ+ + D+ T R Sbjct: 71 IVGADVQLAQAIADELDVD---LELSPMSFDNVLSSLQTGKADLAISGLSHTKERAKV-- 125 Query: 116 LAFRPITYFDGQGFIMHKKKGISS--VSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F Y +M + +S L+G + Q G+ E + N Sbjct: 126 YDFSIPYYQAENAIVMRASDAKVTKNISDLNGKKVAAQKGSIEEGLVKIQLPKAN----L 181 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 I + E +A + A T + + + A A+ + Sbjct: 182 ISLTAMGEAINELKAGQVYAVTLEAPVAAGFLAQHKDLALAPFSLKTSDGDAKAVALPKN 241 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 + V+ + E Sbjct: 242 SGDLTKAVNKVIAKLDEQERYK 263 >gi|16802888|ref|NP_464373.1| hypothetical protein lmo0847 [Listeria monocytogenes EGD-e] gi|16410235|emb|CAC98925.1| lmo0847 [Listeria monocytogenes EGD-e] Length = 480 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 98/297 (32%), Gaps = 22/297 (7%) Query: 1 MYK----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K ++I C+ FT NA +I +L G +T F + +G+ Sbjct: 1 MKKFSRFILMMAIACVAAFIFTGNGLNAKAAEEI----YL-IGTDTTFAPFEF-EKDGEH 54 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D+D +A++ K + + AL++ Q+D + T R+ Sbjct: 55 VGIDMDILKAIAKD---QNFKYEIKAMGFNAAVQALEANQVDGVIAGMSITDERK--QKF 109 Query: 117 AFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + G I+ I + L G + V+ GT + +V Sbjct: 110 DFSDPYFDSGVVMGILKDNDEIKTYDDLKGKKVAVKTGTEGYAFAEKI--KDKYDFDIVV 167 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ ++ + A D L T + I+ + + A+ +G Sbjct: 168 FDDSAQMYDDVKTRNSVACFDDYPVLAYGVQT---GNGLKIVTEKEKGNSYGFAVNKGKN 224 Query: 236 EWYNIVSWTHYAMVTA-EELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291 + + A E KN + N + F+GI KSS GL Sbjct: 225 QELLEKFNAGLVNIKASGEYEKILKNYLGKNAIKENTTEKGFMGIIKSSWPALLSGL 281 >gi|107099296|ref|ZP_01363214.1| hypothetical protein PaerPA_01000308 [Pseudomonas aeruginosa PACS2] Length = 248 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 67/237 (28%), Gaps = 19/237 (8%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 +++ + +A +L D+ +RG L+ + F + G GF+ + L++ + Sbjct: 1 MLVSLAAPLAHAELLDDVHQRGALRIALEGTYPPFNFKQG-GKLTGFETELGELLAAELA 59 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 P ++ LQS + DI R F I+ Sbjct: 60 VKPE---FVTTEWSGILAGLQSGKYDIALNQVSVNEQRRKV--FDFSEPYTISSAQLIVR 114 Query: 133 KKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + S+ L G + V GT + + E + R Sbjct: 115 ADETRQFKSLEDLKGLKLGVGQGTNYADLAKSVA-----GVNVRTYPGAPEYLQDLASKR 169 Query: 191 CDAYTGDISA--LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 DA D + + P P + + ++ ++ Sbjct: 170 IDAALNDRLLIPFAIREAKLPVKPGAAVGPVANMAIPY----RKNNPKFGEALNAAL 222 >gi|328958153|ref|YP_004375539.1| glutamine-binding periplasmic protein [Carnobacterium sp. 17-4] gi|328674477|gb|AEB30523.1| glutamine-binding periplasmic protein [Carnobacterium sp. 17-4] Length = 485 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 80/240 (33%), Gaps = 15/240 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF----LKCGINTGLVGFAEVKANGDW 56 M K + + IL F A+ L ++G + F A+GD+ Sbjct: 1 MIKKQKQFLGAVFILMLGLFINLATPLSVSAEKGTESDPYMITTDVTYAPFEFKNADGDY 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G DV+ A++ + PL AL+S Q+D + T R+ Sbjct: 61 VGIDVEILDAIAQD---QGFSYELRPLAFSAGLQALESNQVDGMIATMSITDERKE--SF 115 Query: 117 AFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + G + K I+S L G ++ V+ GTT +A+ K N+ + Sbjct: 116 DFSDPYFEAGTVMAVAKDNEDITSYEDLDGKTVAVKVGTTGAAFVAELKKEFNIDVN--Q 173 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 FE + A DA D + + D + A+ +G Sbjct: 174 FEDSATMYEDVVAGHSDAVFDDYPVMAYAVQQ---GLQLQFPLDPEAGDVYGFAVNKGQN 230 >gi|226944240|ref|YP_002799313.1| ABC transporter substrate binding protein, family 3 [Azotobacter vinelandii DJ] gi|226719167|gb|ACO78338.1| ABC transporter, substrate binding protein, family 3 [Azotobacter vinelandii DJ] Length = 292 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 86/247 (34%), Gaps = 11/247 (4%) Query: 4 DFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61 ++ +L + +A L I++R + G+ F + + G++V Sbjct: 16 KALAALFGATLLAVAGSAAHADATLEKIRERNRISVGVILSGPPFGTIDPVTREHLGYNV 75 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + + ++ + + + A R LQ ++DIL N T R L P Sbjct: 76 ELAKGIAKTLGVGLETVS---VLAPNRVQFLQQGKVDILIANMQLTEERTQILDYVPTP- 131 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G G ++ K GI++ L G +CV G+ L + + A F E Sbjct: 132 YEEVGGGALIRKGSGIANWEDLKGKPVCVSQGSNFIKPLVETYGA-----EIKAFRSQSE 186 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + R + C A + L + + LP+ + SP + +G+ + + Sbjct: 187 SLLSLRGNGCVAAVHVGPTMRTLLKEPEWADYELPLPNDLIPSPSVIWVRKGEKDIQARL 246 Query: 242 SWTHYAM 248 Sbjct: 247 DAIVRDW 253 >gi|310778142|ref|YP_003966475.1| extracellular solute-binding protein family 3 [Ilyobacter polytropus DSM 2926] gi|309747465|gb|ADO82127.1| extracellular solute-binding protein family 3 [Ilyobacter polytropus DSM 2926] Length = 251 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 84/249 (33%), Gaps = 22/249 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L ++++ + +++ L G N F + +G GFD Sbjct: 1 MRKMMLIVSLLMLVVLGGCGKKETAQ----EEKKVLFVGTNAEFKPFEYL-EDGKIVGFD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + + + + +++ ++ ALQS++ID++ T R+ + F Sbjct: 56 AELMEKILENLGYE---MEWKNMSFDGLIPALQSEKIDLIIAGMTPTEERKK--AVDFSD 110 Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Q F I+ K + ++ L + Q GT E A + + Sbjct: 111 SYLTTKQSFVIIEKNNELKTMDDLKNKKLGAQLGTAQETIARGIEGAK-----ITPYTSI 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEW 237 ++ + DA + N+ + + LP A AI +G+ E Sbjct: 166 TAAILDLKSEKLDAVVLENLVALPYIKNNEGLKKIDMEELPKADV----AIAINKGNEEL 221 Query: 238 YNIVSWTHY 246 ++ Sbjct: 222 LEKINKELQ 230 >gi|227822264|ref|YP_002826235.1| putative solute-binding component of ABC transporter [Sinorhizobium fredii NGR234] gi|227341264|gb|ACP25482.1| putative solute-binding component of ABC transporter [Sinorhizobium fredii NGR234] Length = 260 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 76/220 (34%), Gaps = 15/220 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + G F + A+G GFDVD +AL + + ++ + + AL + Sbjct: 29 KVVIGTEGAYPPFNNLAADGSLTGFDVDIAKALCEEMKVE---CTFVTQDWEGIIPALIA 85 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQA 152 K+ D + + T R+ + F Y ++ K I+ + + L G + QA Sbjct: 86 KKFDAIIASMSITEERK--QKVDFTNKYYNTPPAIVVPKDSPITEATEAALQGKILGAQA 143 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 TT + K ++ +E R DA D+ L + D Sbjct: 144 STTHSNYAEAHMK----GAEIKLYPTADEYKLDIANGRVDAVIDDVVVLSEWLKSEDGAC 199 Query: 213 EH----VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + + +I+ A+ +GD + A+ Sbjct: 200 CKLLGTLPIDPVINGEGAGIAVRKGDDALREKFNKAIEAI 239 >gi|146294115|ref|YP_001184539.1| extracellular solute-binding protein [Shewanella putrefaciens CN-32] gi|145565805|gb|ABP76740.1| extracellular solute-binding protein, family 3 [Shewanella putrefaciens CN-32] Length = 244 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 72/224 (32%), Gaps = 18/224 (8%) Query: 31 KKRGFLKCGINTGLVGFAEVKAN--GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 K L G N F V + KGFD+D + ++ ++ + Sbjct: 23 KSDDVLVVGTNAAFPPFEYVGGQSGDEIKGFDIDLAKQIAKDAGK---TLKVENMKFDSL 79 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGAS 147 +AL S +ID ++ T R+ + F Y Q +++K I ++ + G Sbjct: 80 IVALNSGKIDFIASGMTITAERQA--NVNFSEPYYEATQVILVNKDNDSIHTLEDIKGKY 137 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 VQ GTT + + + F E + + D D Sbjct: 138 FAVQLGTTAD------IMSKKYTQNITAFNTGFEAIMELKNAKVDLVLFDSEPAANYLAK 191 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 N E ++ A+ + E ++ T A + A Sbjct: 192 NP---ELKMIKLDFPAEFYGFAVSKKQPELLASINKTL-ANMKA 231 >gi|99078016|ref|YP_611274.1| extracellular solute-binding protein [Ruegeria sp. TM1040] gi|99035154|gb|ABF62012.1| extracellular solute-binding protein family 3 [Ruegeria sp. TM1040] Length = 250 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 85/228 (37%), Gaps = 22/228 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L L F T+ + + G++ G F VK + + +GF+ Sbjct: 1 MKKQIAITALTLAATFGTAQAE------------TINVGMSGGYFPFTFVKLD-ELQGFE 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+++ ++ ++ ++ AL+S +ID ++ T RE + Sbjct: 48 VDVINAIAAETG---DEVNFVTMSFSGLIGALESGRIDTIANQITITPEREAKFAFSQPY 104 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + I+ S LSG S+ V G+ E L + + + +E Sbjct: 105 VFDGAQVVVKRGNEDSITGPSDLSGKSVAVNLGSNFEELLNEL--PNASEIDIRTYESNI 162 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP--DIISKSPL 226 D A R DA+ D + L + P P +I + P Sbjct: 163 AQDTAL--GRVDAFVMDRVSSAQLIAESPLPLALAGAPFSEIRNAMPF 208 >gi|218670321|ref|ZP_03519992.1| ABC transporter, substrate binding protein (amino acid) [Rhizobium etli GR56] Length = 158 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 10/163 (6%) Query: 1 MY-----KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M + +I + ++ +A L DI RG ++ G+ TG V G+ Sbjct: 1 MKFSNSIRTALAAIGIVAAGLASAVEAHAVTLNDIISRGTVRIGVLTGAPPMGMVDEKGN 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+DVD + ++ +PL R ALQ+ ++D L T R + Sbjct: 61 PTGYDVDVANLIG---GYLSLPVELVPLTPPARIPALQTGKVDFLVATLAPTGERAKT-- 115 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTEL 158 + F I + + ++ L G + G++ E Sbjct: 116 VMFTQPYSAFNMDIISGPDQKFAKLADLEGKRVAANRGSSQET 158 >gi|213622642|ref|ZP_03375425.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 205 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 75/219 (34%), Gaps = 22/219 (10%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + L L + S +A L G + + V A+ GFD+D A+ Sbjct: 1 MLLASLSVHAASVSART---------LHFGTSATYAPYEFVDADNKIVGFDIDVANAVCK 51 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + ++ + + L+ K+ D + D T RE ++F Y Sbjct: 52 EM---QAECSFTNQSFDSLIPGLRFKKFDAVIAGMDMTPKRE--QQVSFSQPYYEGLSAV 106 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ +K + + L G + ++ GTT + L D P+ ++ + + Sbjct: 107 VVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYLNAFTDLKNN 162 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDI-ISKSPLA 227 R + GD + A+ ++ I+ + Sbjct: 163 RLEGVFGD---VAAIGKWLKNNPDYAIMDERASDPDYYG 198 >gi|139473633|ref|YP_001128349.1| putative glutamine ABC transporter,glutamine-binding protein/permease protein [Streptococcus pyogenes str. Manfredo] gi|134271880|emb|CAM30117.1| putative glutamine ABC transporter,glutamine-binding protein/permease protein [Streptococcus pyogenes str. Manfredo] Length = 724 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 97/293 (33%), Gaps = 38/293 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V +L ++ +F T +A + + +T F ++ +KG D Sbjct: 1 MTHKIKVLMLAIMSIFLTCNIASAETIAIV---------SDTAYAPFEFKDSDQIYKGID 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ D + + +A A+QS Q L T T R+ F Sbjct: 52 VDIINEVAKRQSWD-FSMSFPGFDAAVN--AVQSGQASALMAGTTITNARKKV--FHFSE 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K I S L G ++ V+ GT + L +Y Y F+ + Sbjct: 107 PYYDTKIVIATRKANAIKKYSDLKGKTVGVKNGTAAQAFLNNY--KKKYDYTVKTFDTGD 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP--AIIQGDTEWY 238 + + A A D + + N + + P+ ++ + + Sbjct: 165 LMYNSLSAGSIAAVMDDEAVIQYAISQNQD------IAINMKGEPIGSFGFAVKKGSGYD 218 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290 +V+ + A + + D T + ++LG D + +A G Sbjct: 219 YLVNDFNTA-------------LKAMKADGTYQAIMTKWLGTDDKATTSQATG 258 Score = 94.4 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 79/256 (30%), Gaps = 16/256 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + S A+ IK + ++ F G + G D Sbjct: 241 MTKWLGTDDKATTSQATGNPSAKAT---PIKDSYKIV--SDSSFAPFEFQNGKGKYVGID 295 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ +A++ KI+ A+QS Q D + T R+ F Sbjct: 296 IELIKAIAKQ---QGFKIEIANPGFDAALNAVQSSQADGVIAGATITDARKAI--FDFSD 350 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + K I + L ++ + GT++ L + + + F+ Sbjct: 351 PYYTSNIILAVKAGKNIKNYEDLDRKTVGAKNGTSSYSWLKENAPKYGY--NVKAFDDGS 408 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYN 239 + + + DA D LK + + IS + A+ + + E Sbjct: 409 SMYDSLNSGSVDAIMDDE---AVLKYAISQGRRFETPLEGISTGEVGFAVKKGTNPELIE 465 Query: 240 IVSWTHYAMVTAEELG 255 + + A+ + + Sbjct: 466 MFNNGLAALKKSGQYD 481 >gi|330831728|ref|YP_004394680.1| polar amino acid ABC transporter periplasmic binding protein [Aeromonas veronii B565] gi|328806864|gb|AEB52063.1| ABC-type polar amino acid transporter, periplasmic binding protein [Aeromonas veronii B565] Length = 252 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 77/250 (30%), Gaps = 21/250 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I+L S A +K G++ F VK + +GF+ Sbjct: 1 MKTSIKLISGAAILLATLSGQAIAQE--------TIKVGMSGKYFPFTFVKQD-KLQGFE 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++++ + F L++ +ID +S T R+ F Sbjct: 52 VDMWNQIGERTGYK---VEFVTASFSGLFGMLETGRIDTISNQITITDERKA--KYDFSQ 106 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +DG ++ K I + L G + V G+ E L N I Sbjct: 107 PYVYDGAQIVVRKGNSTIHGIKDLEGKKVAVNLGSNFEELLR-----KNDPNKKIDIRTY 161 Query: 180 EEID-AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA+ D + L + P + P ++ L Sbjct: 162 DSAFEQDVALGRIDAFVMDRVSTAQLIKESKLPLQQAGAPFETIENALPFLKTPEKQALL 221 Query: 239 NIVSWTHYAM 248 V AM Sbjct: 222 KKVDEALTAM 231 >gi|293377691|ref|ZP_06623880.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] gi|293571887|ref|ZP_06682903.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E980] gi|291608141|gb|EFF37447.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E980] gi|292643691|gb|EFF61812.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] Length = 500 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 90/273 (32%), Gaps = 28/273 (10%) Query: 1 MYKD-----FFVSILCLIILFF----------TSFSTNASILGDIK-KRGFLKCGINTGL 44 M + F + L+ L F T+ S+ + + I+ K+ ++ Sbjct: 1 MKRKHLFHSFVFLMTGLVTLAFGHVAQADNTTTAESSTSETMQKIEPKKDVYVIASDSAF 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F ANG+++G DV +++ I+ AL+S Q D + Sbjct: 61 APFEFQNANGEYEGIDVKLMESIAK---LQGFNIRMDYRGFSAALQALESGQADGMIAGM 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADY 163 T R+ F + G + K I S L G ++ + GT + L+D+ Sbjct: 118 TVTDERKK--SYDFSDSYFDSGIQLAVKKGDTSIKSYEDLKGKTVGAKVGTESAEFLSDH 175 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + F+ +++ + DA D + + E + S Sbjct: 176 ESEYGYS--IKYFDAADQLYDGLKVGAIDAMMDDYPVIG---YAIKQGQELETPIEKESG 230 Query: 224 SPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255 A A+ + + E N+ + + E Sbjct: 231 GKYAFAVKKGQNPELLNMFNEGLKELKRTGEYD 263 >gi|186475921|ref|YP_001857391.1| glutamine ABC transporter periplasmic protein [Burkholderia phymatum STM815] gi|184192380|gb|ACC70345.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 248 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 77/218 (35%), Gaps = 13/218 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L ++T V F + + + GFD+D A++ + D + P++ ALQ+ Sbjct: 26 TLLVAVDTAFVPFEFKQGD-KYVGFDIDLWEAVAKDVKIDY---KLQPMDFSGILPALQT 81 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 +D+ R+ + F Y G ++ I L G S+ ++ GT Sbjct: 82 HNVDVALAGITIKDERKKV--IDFSDGYYDSGFMLMVPVTSTIKGPDDLKGKSLAIKTGT 139 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + ADY KAH F ++ + R DA D + T + Sbjct: 140 SA----ADYAKAHFAGTDLRQFPNIDNAYLELQTGRVDAAMHDTPNVLYYIHTAGQGRVK 195 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + P + A +G V+ A + A+ Sbjct: 196 AVGPQ-MMAQQYGIAFPKGSP-LVAKVNAAI-AKIKAD 230 >gi|158424239|ref|YP_001525531.1| ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] gi|158331128|dbj|BAF88613.1| ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] Length = 264 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 79/227 (34%), Gaps = 13/227 (5%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 +I +RG ++ G+ G V G+ G+D D ++ + Y+ L R Sbjct: 34 EIVQRGTVRIGVLIGGPPMGMVDDKGNPTGYDYDVAVLIAKYLGVKAE---YVALTPPAR 90 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 ALQ+ ++D L + T R + F + K + S+ L G + Sbjct: 91 IPALQTGRVDFLIATLNPTPERAR--SVMFTMPYNAFNMVVVT-KGAKVESLDALKGKKV 147 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 GT E L +A + FE A + + +A + L + Sbjct: 148 GATRGTPQEAALR---RAGGINVTI--FEDDSITTQALLSGQVEAAALPETL--VLSVAK 200 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 P + + I + A+ GD E ++ T Y M EL Sbjct: 201 QNPDAKLEIGFSIYAQGNSMAVRPGDFEILQWLNNTIYFMKKNGELD 247 >gi|257865935|ref|ZP_05645588.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257872268|ref|ZP_05651921.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] gi|257799869|gb|EEV28921.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257806432|gb|EEV35254.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] Length = 717 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 74/252 (29%), Gaps = 15/252 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L +I+ + S ++ + K G + F N ++ G D Sbjct: 1 MKRKHMSFALIALIISIFTLSVKSASAEET----TYKIGTDLTFAPFEFKNENNEYVGID 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + PL + S Q+D + T R+ F Sbjct: 57 IDLLNAIAED---QGFAVDLRPLGFDPSIQGVLSNQLDGMIAGMSITEERKE--NFDFSD 111 Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + I+S L G ++ + GT + L + + Sbjct: 112 PYFDSGIQMAVADDNDSITSYEDLEGETVGAKVGTESARFLEENKDQYGYDIKL-----Y 166 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ Y A R L + ++ + + A+ +G + Sbjct: 167 DDATGLYGAVRNGTVAAAFDDYPVLGYAINNGEPMKLVGEPEKGASYGFAVRKGQNQELL 226 Query: 240 IVSWTHYAMVTA 251 A + A Sbjct: 227 EKFNAGLANMKA 238 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 36/243 (14%), Positives = 78/243 (32%), Gaps = 15/243 (6%) Query: 18 TSFSTNASILGDIK---KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 T+ ++A +K K+ + ++ F + ++ G DVD ++ + Sbjct: 251 TTSDSDADTSEMVKVEPKKDVYRIASDSAFAPFEFQNEDNEYVGIDVDLMNR-AAELQG- 308 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK- 133 I++ + AL Q D + T R F + G + + Sbjct: 309 -FNIEFNFIGFSGALQALDGNQADGMIAGMTITDER--RQSYDFSDSYFESGIQIAVKEG 365 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I+S L G ++ + GT + L + + ++ +++ AA + DA Sbjct: 366 NDSINSYEDLEGKTVGAKVGTESADFLIANEEKYGYS--IKYYDAADQLYAAVNGGQIDA 423 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAE 252 D + + V + S A+ + + E + + M Sbjct: 424 MMDDYPVIGYAISQGQK---LVTPIEKESGGQYGFAVKKGQNPELIQMFNEALKEMKRTG 480 Query: 253 ELG 255 E Sbjct: 481 EYD 483 >gi|167743916|ref|ZP_02416690.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 14] Length = 240 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 74/219 (33%), Gaps = 6/219 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSKI 78 +A L I + V F + GF D A+ + +I Sbjct: 15 HARTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVVDDVRKKLKMPGLQI 74 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Y+P+ + R L + D+ +T T R ++F ++ G ++ K I Sbjct: 75 AYIPVTGQNRNPLLVNDTYDLEGGSTTNTAAR--GQDVSFSMNLFYAGTRVLVKKASRIR 132 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G ++ AG+T E + Y H++ + + + R D Sbjct: 133 GYADLAGKTVATAAGSTNENVIRKYAADHHLDIDVVPAKNYAAGPRMVESDRTAVLALDD 192 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 L+ ++ P + D + P + +GD Sbjct: 193 VLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDPAS 231 >gi|323342444|ref|ZP_08082676.1| polar amino acid ABC superfamily ATP binding cassette transporter, binding protein [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463556|gb|EFY08750.1| polar amino acid ABC superfamily ATP binding cassette transporter, binding protein [Erysipelothrix rhusiopathiae ATCC 19414] Length = 273 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 38/268 (14%), Positives = 89/268 (33%), Gaps = 26/268 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKA----N 53 M K F V+ C+ +LF + + L IK +G + + + + A Sbjct: 1 MKKTFIVA--CVTLLFLSGCGKKDTTVTKLEAIKSKGEIVLVTSPDYAPYEFIDATKTGQ 58 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 + G D++ + +++ I D + ++ + A+ + D+ + R Sbjct: 59 DQYVGADIELAKFIANEIGVD---LVIKAMSFGDIASAVSLGKFDMGIAGFTFNEERAE- 114 Query: 114 LGLAFRPITY-----FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 + F G K+ ++++ L A + VQ G+ + + Sbjct: 115 -QVDFSNTYDTTESTCQGFLVTKEKEATLNTIDDLKTAKVAVQNGSLPQTYVETELPEA- 172 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + +++ + DA ++ L N + I + Sbjct: 173 ---TMQLVNTLDDAVLQLNVGKVDAIAASCASGEGFTLNNKNLVVSKVKFATIDDNGTKV 229 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGI 256 + +G + + V+ A+ A EL + Sbjct: 230 ILEKGQEDLMDEVNK---AIAKAVELDL 254 >gi|254473430|ref|ZP_05086827.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp. JE062] gi|211957546|gb|EEA92749.1| extracellular solute-binding protein, family 3 [Pseudovibrio sp. JE062] Length = 258 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 71/220 (32%), Gaps = 17/220 (7%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 + K+ ++ G F A+G GFD++ AL + + ++ + Sbjct: 20 AEAKEWTKVRMGTEGAYPPFNYTTADGTLTGFDIEIGNALCEEL---KLECTWVTQDWDG 76 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS--SVSQLSG 145 L + + D + + T R ++F Y G + K ++ + L G Sbjct: 77 IIPGLVAGKYDTILASMSITPER--MEKISFSEKYYNTPPGIAVRKDSELTEATPEGLKG 134 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 + Q TT + ++ EE R DA D+ AL Sbjct: 135 VRLGAQGSTTHSQFAEEIL----NGSDVALYPTSEEYKLDLENGRVDAVVDDVMALEQWI 190 Query: 206 LTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNI 240 ++ IL + S + + +GD + + Sbjct: 191 SSDKGSCC-KILGTMQSVEEIHGKGAGIGVRKGDEDLAAL 229 >gi|152969095|ref|YP_001334204.1| extracellular solute-binding family protein 3 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150953944|gb|ABR75974.1| putative bacterial extracellular solute-binding protein, family 3 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 247 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 78/235 (33%), Gaps = 14/235 (5%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 AS + ++ G++ F G GFD+D A+ + +K ++ Sbjct: 2 ASTSALAEGGKEIRFGVDPTFAPFEWKDPQGKLAGFDIDLGNAICQQL---QAKCVWVES 58 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI-TYFDGQGFIMHKKKGISSVSQ 142 N AL++++ D + T R+ + F ++ Q Sbjct: 59 NFDGIIPALKARKFDAILSGMYMTEKRKAQIA--FSDKLYNGPVFLVARKNTLQGNTPEQ 116 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G +I V+ G+ E + +++ + + + ++ + + + R D Sbjct: 117 LKGKTIGVEQGSAQETYVNQHWRPQGI--NIVAYQGADSVVRDLESGRIDGAVLSGMMAD 174 Query: 203 ALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAE 252 L + E + + L A + + D ++ A + A+ Sbjct: 175 YSFLQQPQGKEFAFVGGHLQDDTLFGAGAAIGLRKDDEALRQEINGAI-AKILAD 228 >gi|189425081|ref|YP_001952258.1| polar amino acid ABC transporter inner membrane protein [Geobacter lovleyi SZ] gi|189421340|gb|ACD95738.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter lovleyi SZ] Length = 748 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 53/275 (19%), Positives = 105/275 (38%), Gaps = 24/275 (8%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 ++ LK G++ F+ V +G GFD + R ++ + +++ + Sbjct: 162 RQGKILKIGVSATREPFSFVDDHGRVSGFDGELARIIAVKL---QRPVEFFNMKFMALIP 218 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-----------KGISS 139 ALQS ++D++ T R+ + + F + + Q ++ K +S+ Sbjct: 219 ALQSGKVDLIISGMTATSERKKT--VNFTQPYFANKQVMLVRKPAVAPLSTVSDRSELST 276 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 ++ L G ICV G+ E+ F VF + A ++ DA+ D S Sbjct: 277 LNSLKGKRICVLPGSAGEMAARQKF----SGSQFQVFTAAADAALAITTNKADAFVYDKS 332 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL-GITQ 258 L L L P E +IL + K +A A+ + +T + ++ ++ EL + Sbjct: 333 VL--LNLAEKNP-ELMILDQAVDKLEVAAALRKDNTALLSEMNKALQSLKQEGELQRLRT 389 Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTK 293 K ++ T + + +G L Sbjct: 390 KWVDTKYTATPQLQPAKAVHTSGVLRMGTCANLEP 424 Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 6/106 (5%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 + G L+ G L F+ +NG G D + + L + I+ + +N + Sbjct: 406 KAVHTSGVLRMGTCANLEPFSFQ-SNGIITGLDRELSQLLGERLNKK---IEIIDMNFEA 461 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 ALQS +ID N + T R+ + F + ++ K Sbjct: 462 LIPALQSGKIDFALSNFNVTEERKKL--INFSVPYITNDISVLVRK 505 >gi|149187233|ref|ZP_01865531.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio shilonii AK1] gi|148838769|gb|EDL55708.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio shilonii AK1] Length = 274 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 73/252 (28%), Gaps = 17/252 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 I + + + L I +R L+ G++T V +A GD GF Sbjct: 6 KNIIRAITTAAIGMAVSLGVAASDTPNLDKINERDTLRVGMST-FVPWAMRDKQGDLIGF 64 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D + L+ ++++P AL +++ D++ T R S + F Sbjct: 65 EIDVAKRLAEDSGWK---VEFVPTAWDGIIPALLAQKFDVIIGGMSITPER--SKSVLFT 119 Query: 120 PITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 G KK I + G T + F + Sbjct: 120 TPYSHSGVQIAASKKLAEGFSTIEDFDSRRVKIAARRGAYTVQVARETFPKAK----VLQ 175 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + A + + + + +SK A A+ G+ Sbjct: 176 FDDDAQAFQEVLNGNAHAVIASSPKPEHEAIKHANAL-FIPFSERLSKGNEAFAVRLGEE 234 Query: 236 EWYNIVSWTHYA 247 + A Sbjct: 235 DKKAFFDQWIQA 246 >gi|134046090|ref|YP_001097576.1| extracellular solute-binding protein [Methanococcus maripaludis C5] gi|132663715|gb|ABO35361.1| amino acid ABC transporter substrate-binding protein, PAAT family [Methanococcus maripaludis C5] Length = 261 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 86/253 (33%), Gaps = 20/253 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGD------IKKRGFLKCGINTGLVGFAEVKAN- 53 M + I+ +++F S++ + + + +++ G LK G F Sbjct: 1 MNNKLLILIIGTVLMFSGCVSSSEAQIDEDLSWKNVEENGVLKVGFCATWPPFESRNETT 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G+ +GFDVD +AL + + ++ + + L D L Sbjct: 61 GEIEGFDVDLAKALGEELGVE---VEIIDAEWQALLGGLSKGDYDTLITCMS--KKEASV 115 Query: 114 LGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 + + Y ++ I+SVS LSG + VQ G +E + A + Sbjct: 116 ENVEMSDVYYELNDVIVVRIDNNEITSVSDLSGKIVGVQLGFGSEQAV----DALSGIQE 171 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + E + +R DA + + + +L ++ + +A + Sbjct: 172 IKRYNYNPEAMIDLQNNRSDAVFVGYT---YALSEISKCPDLKVLDTPVASAEIAMVQKE 228 Query: 233 GDTEWYNIVSWTH 245 G E ++ Sbjct: 229 GAKELTAKLNEAL 241 >gi|146305347|ref|YP_001185812.1| extracellular solute-binding protein [Pseudomonas mendocina ymp] gi|145573548|gb|ABP83080.1| amino acid ABC transporter substrate-binding protein, PAAT family [Pseudomonas mendocina ymp] Length = 261 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 80/218 (36%), Gaps = 10/218 (4%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 DI G LK + F V + +G D+D + L+ + K++ P+N+ Sbjct: 29 EDISAAGVLKVAVPQDFPPFGSVGPDMKPRGLDIDTAQLLADKL---QVKLELTPVNSTN 85 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 R L + ++D++ + RE + F G + I+S+ L+G + Sbjct: 86 RIPFLTTGKVDLVISSLGKNPEREAV--IDFSAPYAPFYLGVFGPEDAAIASLDDLAGKT 143 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 I V G+ ++ L++ FE AAY + + + + A+ Sbjct: 144 ISVTRGSIEDIELSNVAPK---GATIKRFEDNNSTIAAYLSGQVELIASGNVVMVAIAER 200 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 P + + SP+ + + T + V+ Sbjct: 201 --NPKRIPSMKLKLKDSPVYVGVNKSQTALLDKVNAII 236 >gi|307637631|gb|ADN80081.1| putative aminoacid ABC transporter [Helicobacter pylori 908] Length = 257 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 33/251 (13%), Positives = 76/251 (30%), Gaps = 14/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +S L L+I F F +S+ + + + G F G G+D Sbjct: 1 MKK---ISCLLLVISFLGGFLNASSLYEKLVNKETISVGTEGIYPPFTYHNKEGKLTGYD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R L+ + I++ + L+S + D+++ T ++ Sbjct: 58 VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQAAFDKSL 113 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G ++ K I + + G +T A + + + Sbjct: 114 PYSYSGTIMLVRKDENRIKGIEDIKGLKAANTLSSTYGEI------AFKYDAQIVSVDSM 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R D A+ T+ + ++ I + + Sbjct: 168 AQALLLVAQKRADLTLNSSLAILNYLNTHKNSPFKIAWESKEKDGDVSFVINKHQEKALE 227 Query: 240 IVSWTHYAMVT 250 +++ ++ Sbjct: 228 LINQAMQRLIN 238 >gi|296159447|ref|ZP_06842272.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. Ch1-1] gi|295890431|gb|EFG70224.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. Ch1-1] Length = 264 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 78/219 (35%), Gaps = 13/219 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 + G+ F +G+ +GFD+D A+ + + ++ ++ + ALQ Sbjct: 30 KEVHFGVEASYAPFESKSPSGELQGFDIDVGNAVCAKL---KARCVWVENSFDGLIPALQ 86 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152 +++ + ++ + T R + F Y I K G + + + L G + V Sbjct: 87 ARKFNAINSDMTITDQR--RQAIDFTDPIYTIPNQMIAKKGSGLLPTPASLKGKHVGVLQ 144 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT E + + + ++ ++I A + R DA D A L + + Sbjct: 145 GTIQETYAKARWAPAGVD--VVPYQTQDQIYADLASGRLDAAFQDAEAASKGFLKKPQGA 202 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246 ++ L + +GD + ++ Sbjct: 203 GFDFAGPAVTDEKLLGAGVGFGVRKGDKALKDALNQALK 241 >gi|254671931|emb|CBA04283.1| polar amino acid transport system substrate-binding protein [Neisseria meningitidis alpha275] Length = 262 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 58/193 (30%), Gaps = 10/193 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + + S++ I +G + G F +G G+DV+ RA++ + Sbjct: 20 AQSAVSGSLIERINNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVK--- 76 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 +++ L++ + D+++ T E + G + I Sbjct: 77 VEFKETQWDSMMAGLKAGRFDVVANQVGLT-SPERQATFDKSDPYSWSGAVLVARNDSNI 135 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S+ + G + KA + + + + R DA D Sbjct: 136 KSIDDIKGVKTAQSLTSNYGE------KAKAAGADLVAVDGLAQSLTLIEQKRADATLND 189 Query: 198 ISALYALKLTNDR 210 A+ N Sbjct: 190 ELAVLDYLKKNPN 202 >gi|257451923|ref|ZP_05617222.1| amino acid-binding protein [Fusobacterium sp. 3_1_5R] Length = 238 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 14/212 (6%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 L G N F + G GFD++ AL+ + D ++ + ALQ Sbjct: 23 KTLYIGTNAEFAPFEYL-EKGKVTGFDMELMNALAKEMKMD---VKIENMAFDGLLPALQ 78 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 K++D++ T R+ ++F + Q I K K I +LSG + V G Sbjct: 79 MKKVDVVIAGMTETPERKK--AVSFTKPYFKAKQVIITKKGKDIKDFKELSGKRVGVMLG 136 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 T + ++D A F+ A + DA D + + Sbjct: 137 FTGDAVVSDIKGAK-----VQRFDATYSAVMALEKGKVDAVVADSEPAKKYIASYK---D 188 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 I + A A+ + D + ++ Sbjct: 189 LAIASAKAEEEDYAIAVRKNDKALLDNLNKAL 220 >gi|170016959|ref|YP_001727878.1| amino acid ABC transporter periplasmic protein [Leuconostoc citreum KM20] gi|169803816|gb|ACA82434.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Leuconostoc citreum KM20] Length = 491 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 117/336 (34%), Gaps = 46/336 (13%) Query: 13 IILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRA 66 +++ T + A IKKRG L G++ F V+ GF+V + Sbjct: 22 LMMVATPKAQAAETDSAYSAIKKRGVLVVGLSADYAPFEFHATVQGRDQIVGFEVSMAKQ 81 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + +Q + A+Q+ +ID++ + T RE + F Sbjct: 82 IAKDLGVK---LQIKEMGFDGLIGAVQTGKIDVIVSGINATPDREKV--VDFSKSYLSPK 136 Query: 127 QGFIMHKK---KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 Q ++ KK + S+V+ +G + Q TT E + + + + ++V ++ Sbjct: 137 QTVLVLKKNAAQFTSNVNSFAGKKVGAQRQTTQETFVQNNMSSA----TLVSLQKVPDLV 192 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYNIVS 242 + A + + A + VI P ++ A+ + ++ Sbjct: 193 SQLSAGKLAGVVLNDPISEAYAQQ--NKALKVIYPQPNEAEGAVSVAMPKNSPVLKEKIN 250 Query: 243 WTHYAMVTAEELGI--TQKNINQVSKDTTNPDVQRFL--GIDKSSNI-------GEALG- 290 +V++ +L + N +K + G + + G LG Sbjct: 251 QAIDDIVSSGKLKAYKKEANTLMFAKQSFWSKYGNLFIKGTLITLALAAVAVVIGSILGT 310 Query: 291 ------LTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320 L+ ++ ++ +GN ++ + + L Sbjct: 311 VFALFKLSPNFL---LKAVGN---IYVEYV-RGTPL 339 >gi|300214383|gb|ADJ78799.1| Glutamine-binding protein / Glutamine transport system permease protein [Lactobacillus salivarius CECT 5713] Length = 485 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 73/236 (30%), Gaps = 13/236 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + + L F SF ++ + F + + G D Sbjct: 1 MKK-FITFLSIISSLIFLSFFVKPQLVHA--DEKTYTIATDVTFPPFEYANDSNKYVGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + K+ P+ ++ + Q+D + T R+ F Sbjct: 58 IDLMNAIAKE---EGFKVDLKPIGFNAALQSVSAGQVDGMIAGMTITDERK--QKFDFSK 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + I S+ QL G + ++ GT+ + K + F+ + Sbjct: 113 PYYSSGIVMAVKPDSNIKSLKQLRGKKVAIKTGTSGADYANSIKDKYGFKT--VTFDDSD 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + A D L+ I+ + A+ +G + Sbjct: 171 NMYNDVKNGNSVACFED---SAVLEYGISTGLGLKIVTKPANSGBFGFAVKKGTHQ 223 >gi|118444146|ref|YP_877029.1| amino acid ABC transporter, substrate-binding protein [Clostridium novyi NT] gi|118134602|gb|ABK61646.1| amino acid ABC transporter, substrate-binding protein [Clostridium novyi NT] Length = 280 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 88/265 (33%), Gaps = 30/265 (11%) Query: 1 MYK----DFFV--SILCLIILFFTSFSTNA---------SILGDIKKRGFLKCGINTGLV 45 M K + +L + F + + IKK G L G Sbjct: 1 MLKGKKLKLIICGLMLTMGATLFVGCGNKNKDAKEDKNLTKIEKIKKSGKLVLGTCADYP 60 Query: 46 GFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 + + G D++ + ++ + ++ ++ L+++S +ID++ Sbjct: 61 PYEAQQVKDGKPEIVGIDIEIAKEIAKDLGVK---LEIKDMDFDPLVLSVKSGKIDMVIS 117 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTL 160 + T RE + F I Y Q I+ + ++SV LSG + Q + E Sbjct: 118 GMNPTPDREK--EIDFSKIYYRAKQSVIIRDEDKAKLTSVESLSGKKVGAQLTSLQEKIA 175 Query: 161 ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDI 220 + K +V E+ A + + DA + A + + Sbjct: 176 KEEIK----GAKVTSLGKVNELVTALKTKKVDAVIVEEPVAKAYVAKYP-GTTIANINVG 230 Query: 221 ISKSPLAPAIIQGDTEWYNIVSWTH 245 A I +G+ E+ + V+ T Sbjct: 231 KPNEGSAVGIQKGNKEFVDSVNKTI 255 >gi|328946378|gb|EGG40519.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1087] Length = 729 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 59/206 (28%), Gaps = 16/206 (7%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F +L L F + A +K +T F ++ +KG DVD Sbjct: 12 FLAVLLTLFPFFALGVTAQADT---------VKIVSDTAYAPFEFKDSDQTYKGIDVDII 62 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ D I A+QS Q D + T RE Y Sbjct: 63 NKVAEIKGWD---IDMSFPGFDAAVNAVQSGQADAIMAGMTKTSEREKV--FTMSDTYYD 117 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 K IS QL G + V+ GT + L + F+ + + Sbjct: 118 TKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKNKDKYGY--TLKTFDTGDLMYN 175 Query: 185 AYRAHRCDAYTGDISALYALKLTNDR 210 + A DA D + Sbjct: 176 SLSAGDVDAVMDDQPVIEYAINQGQN 201 Score = 89.4 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 28/241 (11%), Positives = 70/241 (29%), Gaps = 14/241 (5%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 + ++ F + + G D++ +A++ ++ ++ Sbjct: 277 KDKYIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QGFTVEVTNPGFDAAINSV 333 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152 Q+ Q D + T R+ + + Y + I S +L G ++ V+ Sbjct: 334 QTGQADGIIAGMSVTDARKKT--FDYSDPYYTANSILAVKDSSNIKSYEELKGKTVGVKT 391 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT ++ L + + F + + A D + + Sbjct: 392 GTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVMDDEPVVKYAIKQGKK-- 447 Query: 213 EHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 L I +P A ++ + + +E G Q+ +++ Sbjct: 448 ----LKTPIEGTPSGQVAFAVKKGSNPELIEMFNNGLANLKESGKYQEILDKYLASEEKE 503 Query: 272 D 272 Sbjct: 504 S 504 >gi|327183100|gb|AEA31547.1| glutamine ABC transporter [Lactobacillus amylovorus GRL 1118] Length = 219 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 71/194 (36%), Gaps = 9/194 (4%) Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 + +GF++D AL+ + +K ++ A + L++K ID + T R+ Sbjct: 4 KDSKIRGFEIDLAEALTHKMLGKNAKANFVTTTANTKIQLLKNKNIDAVIAAMTITPERK 63 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 + F + GQ ++ K I +V L+ + + GTT + + Sbjct: 64 K--QVNFSNPYFPAGQSIMVAKNSKIKNVKDLNNKRVLIVKGTTAADAVHKFAPKA---- 117 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + F+ + AA +A + DA D L + + + P A+ Sbjct: 118 EILQFDDYGQAFAALKADQGDALVTDNGILAG---ILHDNPGYKLTGGTFTNQPYGIAVN 174 Query: 232 QGDTEWYNIVSWTH 245 +G T ++ Sbjct: 175 KGQTAMMKHINTAL 188 >gi|259503172|ref|ZP_05746074.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] gi|259168829|gb|EEW53324.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] Length = 502 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 92/281 (32%), Gaps = 38/281 (13%) Query: 1 MY--KDFFVSILCLIILFFTSFST--------------------NASILGDIKKRGFLKC 38 M K + I+ + L + + IK++G L Sbjct: 1 MKHFKPLLMLIILCVSLVVAPLNAFAAATSSSSSASADSTNSAAADDSVQRIKQKGTLVV 60 Query: 39 GINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 G + + ++ GF++D + + + + ++ +AL+S Sbjct: 61 GTSADYPPYEFTTKKNGKTEYVGFEMDVAKQFAKDLGVK---LVIKNMDFDSLLVALESH 117 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAG 153 ++D + + T R+ + F Y + F+++K K +S +G + Q G Sbjct: 118 KVDTVIAGMNITPERQK--SVDFSKPYYMGSKFFLINKADKSKFTSTKDFAGKKVGAQNG 175 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 + + ++ + A ++H+ D D + A N Sbjct: 176 AMEYNLVKENIP----NVQEKGLAKIPSLVLALQSHKVDGVLMDKATAKAYANNNSNLMA 231 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254 I S +A A +GDT + T A + E+L Sbjct: 232 FDSHIKIQSGG-IAMAFPKGDTSLEAAANQTV-AKINKEDL 270 >gi|222087755|ref|YP_002546292.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725203|gb|ACM28359.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 257 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 72/233 (30%), Gaps = 14/233 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + L I+ G LK G F A+G GFDV+ A++S + + Sbjct: 21 AHAGDNLKAIQDAGVLKVGTEGTYAPFTFHDASGKLVGFDVEIAEAIASKLGVKAE---F 77 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISS 139 L L +K+ D + T R+ F I+ I Sbjct: 78 LEGKWDGLIAGLDAKRYDTVINEVGVTDARK--QKYDFSDPYIASKAVLIVKDSNTDIKD 135 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G Q+ T+ LA A + + ++ R DA D Sbjct: 136 FADLKGKKSA-QSLTSNFGKLAQASGA-----ELVGTDGFDQSIQLVLTGRADATINDSL 189 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + K I+ + A I +G+ E ++ A + A+ Sbjct: 190 SFLDFKKHKPDAPV-KIVAQQANADFSAAIIRKGEPELQAAINKAL-ADIKAD 240 >gi|156339196|ref|XP_001620108.1| hypothetical protein NEMVEDRAFT_v1g223467 [Nematostella vectensis] gi|156204495|gb|EDO28008.1| predicted protein [Nematostella vectensis] Length = 250 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 72/220 (32%), Gaps = 14/220 (6%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 LK G F + A+G GFDV+ +AL + + ++ + + + A Sbjct: 23 AADKLKLGTEGAYPPFNLIDASGQVGGFDVEIGQALCAKM---KAECEVVTSDWDGIIPA 79 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICV 150 L +K+ D L + T R+ + F Y + FI K + L G I Sbjct: 80 LNAKKFDFLIASMSITEERKA--AVDFSEPYYTNKLQFIAPKSGDFKTDKASLKGKVIGA 137 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q T L D + +++ E + R D D + ++ Sbjct: 138 QRATIAGTWLEDNL---DGVVDIKLYDTQENAYLDLSSGRLDGVLADTFVNWEWLKSDAG 194 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 S + + A+ +GD + A + Sbjct: 195 KSFEFKGDPVFDNDKIGIAVRKGD-----ALREKLNAALA 229 >gi|300310826|ref|YP_003774918.1| amino-acid ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gi|300073611|gb|ADJ63010.1| ABC-type amino-acid transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 267 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 83/231 (35%), Gaps = 10/231 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 + D+ K+G + G+ +G F V A G G+DVD + + ++ +PL Sbjct: 31 QSIADLTKKGKITIGVVSGTPPFGSVDAKGTPIGYDVDVANLIGKYLG---LPVEIVPLV 87 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R AL+S ++D+L+ T R + F + + L Sbjct: 88 PPARIPALESGKVDMLAATLAPTPERAK--SVLFTIPYSGFELSIVAPVGSNYKKLDDLV 145 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 + V G+T + L + FE + A +++ DA + + A Sbjct: 146 KKKVGVSRGSTNDTALTRLAP---PGTVLVRFEDDSTVTQALLSNQVDAISIPNT--MAN 200 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 ++ R + + S P + + +G E ++ Y + EL Sbjct: 201 EIVKSRGQGKIEVKFPYSVQPNSMTVRKGSYELQQWLNNFIYYVKLNGELD 251 >gi|292487794|ref|YP_003530669.1| arginine ABC transporter periplasmic protein [Erwinia amylovora CFBP1430] gi|292899024|ref|YP_003538393.1| arginine ABC transporter substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291198872|emb|CBJ45982.1| arginine ABC transporter, substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291553216|emb|CBA20261.1| Arginine ABC transport system, periplasmic component [Erwinia amylovora CFBP1430] gi|312171913|emb|CBX80170.1| Arginine ABC transport system, periplasmic component [Erwinia amylovora ATCC BAA-2158] Length = 243 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 40/247 (16%), Positives = 82/247 (33%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + F + ++ + F + GFD Sbjct: 1 MKKIVLAALLA--SVTFAPQAAE-----------KIRFASSATYPPFESLNGENQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + ++ + AL+ ++ D + D T R S ++F Sbjct: 48 IDLANALCAQM---KAECSFSNNPFDSLVPALKFRRYDAVISGMDITAER--SKQVSFTR 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K +++SQL G + V+ GTT + L + + ++ + Sbjct: 103 PYYANSAIIIAQKG-KFTAISQLKGRRVGVENGTTHQRYLQEKHPE----IVTVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + + A TN I + + A+ + + Sbjct: 158 NAILDLKNSRLDGILGDSAVVGAWLKTNANLASVGEHITDSDFFGTGIGIAVRKDNQALL 217 Query: 239 NIVSWTH 245 + + Sbjct: 218 DQFNAAI 224 >gi|323524410|ref|YP_004226563.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323381412|gb|ADX53503.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 264 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 82/247 (33%), Gaps = 19/247 (7%) Query: 11 CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70 L +S + A L+ G+ F NG+ +G D+D +A+ +A Sbjct: 13 AFASLASSSGAIAADTS-------TLRFGLEAQYPPFESKGPNGELQGLDIDVGKAVCAA 65 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 +++ + ALQ ++ D ++ + T R ++ + Q Sbjct: 66 A---HMTCKWVETSFDGLIPALQGRKFDAINSAMNATEQRRQTIDFT-TVVYRVPTQLIA 121 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190 + + L G + V + E +++ + ++ ++ A R Sbjct: 122 KRDSGLLPTAEALKGKRVGVLQASIQETFAKTHWEPAG--VTVVSYQDQNQVYTDLVAGR 179 Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGDTEWYNIVSWTH 245 DA A L+ ++ + + +A I +GDT ++ Sbjct: 180 LDATLVLAPAGQTGFLSKPSGRDYAFVGQPVRDDKILGSGIAYGIRKGDTALRERLNAAI 239 Query: 246 YAMVTAE 252 A V A+ Sbjct: 240 -AKVQAD 245 >gi|323526410|ref|YP_004228563.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323383412|gb|ADX55503.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 248 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 69/201 (34%), Gaps = 11/201 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L +T V F + + + GFD+D + ++ + D + P++ ALQ+ Sbjct: 26 TLLVACDTAFVPFEFKQGD-QYVGFDIDLWKEVAKDLKIDY---KLQPMDFSGILPALQT 81 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 +D+ R+ + F Y G ++ I L G S+ ++ GT Sbjct: 82 HNVDVALAGITIKEERKKV--IDFSDGYYDSGFMLMVPTASTIKGPDDLKGKSLAIKTGT 139 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + ADY KA+ F ++ R DA D + T + Sbjct: 140 SA----ADYAKANFNGTELRAFPNIDNAYLELATGRVDAAMHDTPNVLYYIHTAGKGRVK 195 Query: 215 VILPDIISKSPLAPAIIQGDT 235 + P + A +G Sbjct: 196 AVGPQ-MMAQQYGIAFPKGSP 215 >gi|91782905|ref|YP_558111.1| ABC lysine/arginine/ornithine transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|91686859|gb|ABE30059.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 264 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 78/218 (35%), Gaps = 13/218 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 + G+ F +G+ +GFD+D A+ + + ++ ++ + ALQ Sbjct: 30 KEVHFGVEASYAPFESKSPSGELQGFDIDVGNAVCAKL---KARCVWVENSFDGLIPALQ 86 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152 +++ + ++ + T R + F Y I K G + + + L G + V Sbjct: 87 ARKFNAINSDMTITDQR--RQAIDFTDPIYTIPNQMIAKKGSGLLPTPASLKGKHVGVLQ 144 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT E + + + ++ ++I A + R DA D A L + + Sbjct: 145 GTIQETYAKARWAPAGVD--VVPYQTQDQIYADLASGRLDAAFQDAEAASKGFLKKPQGA 202 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245 ++ L + +GD + ++ Sbjct: 203 GFDFAGPAVTDEKLLGAGVGFGVRKGDKALKDALNQAL 240 >gi|254255201|ref|ZP_04948517.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] gi|124900938|gb|EAY71688.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] Length = 260 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 80/221 (36%), Gaps = 13/221 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G KGFD+D AL + + +K ++ + Sbjct: 23 KEWTTIRIGVDPTYPPFESTATDGSVKGFDIDLGNALCAKL---NAKCVWVSSSFDGLIP 79 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149 LQ+++ D++ + T R + F Y + I G + S+L+G I Sbjct: 80 GLQARKFDVILSSMAATEQR--RQQIDFTDRLYRNQTRLIARTGSGLLPEASKLAGKRIA 137 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ GT E + + A + + ++ A R D D L Sbjct: 138 VEQGTVQETYAREKWAAAK--VEIVPYPSYDQAYADLVTGRVDGVLMDAVQGQLGFLATP 195 Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245 R ++ + + A + + DT+ + ++ Sbjct: 196 RGKGFSFAGGVVYDAKIMGNGDAAGVRKTDTDLRDALNRAI 236 >gi|25011729|ref|NP_736124.1| hypothetical protein gbs1689 [Streptococcus agalactiae NEM316] gi|77414198|ref|ZP_00790362.1| ABC transporter, substrate-binding protein [Streptococcus agalactiae 515] gi|24413269|emb|CAD47348.1| Unknown [Streptococcus agalactiae NEM316] gi|77159769|gb|EAO70916.1| ABC transporter, substrate-binding protein [Streptococcus agalactiae 515] Length = 277 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 76/249 (30%), Gaps = 12/249 (4%) Query: 2 YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K I+ + + + S+ + KK + F+ V +G GFD Sbjct: 4 KKVLSVTGIILVTVASLAACSSKSHTTKTGKK--EVNFATVGTTAPFSYV-KDGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ +A+ D K+ + F + S + + N ++ R S F Sbjct: 61 IEVAKAVFK--GSDNYKVTFKKTEWSSVFTGIDSGKFQMGGNNISYSSER--SQKYLFSY 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + K I + + ++G V GTTT L ++ K H + + Sbjct: 117 PIGSTPSVLAVPKNSNIKAYNDITGHKTQVVQGTTTAKQLENFNKKHQKNPVTLKYTNEN 176 Query: 181 --EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237 +I + D + + N + +P + P Q + Sbjct: 177 ITQILTNLSDGKAD-FKLFDGLTVNAIIKNQGLTNLKTIPLTMRDQPYIYFIFGQDQKDL 235 Query: 238 YNIVSWTHY 246 V+ Sbjct: 236 QKYVNNCLK 244 >gi|325529506|gb|EGD06408.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia sp. TJI49] Length = 265 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 78/249 (31%), Gaps = 22/249 (8%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K ++ + + +A L+ G+ F NGD +GFD+D Sbjct: 8 KTLKLAFALACAIGSGAAVADAQT---------LRFGLEAQYPPFESKAPNGDLQGFDID 58 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A+ +++ + AL+ ++ D ++ + T R + F I Sbjct: 59 VGNAVCR---TAKLSCKWVETSFDGLIPALKGRKFDAINSAMNATEQR--RQAIDFTTII 113 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y I G + + L G + V + E +++ + + ++ + Sbjct: 114 YRVPTQLIARTDSGLLPTPESLKGKRVGVLQASIQETYAKAHWEPAGVS--VVAYQDQNQ 171 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGDTE 236 A + R DA A L+ + + +A + +GD Sbjct: 172 AYADLVSGRLDATLVLAPAGQRGFLSRPDGKGFSFVGQPVRDDRILGSGIAFGLRKGDDA 231 Query: 237 WYNIVSWTH 245 + + Sbjct: 232 LKSKLDAAI 240 >gi|317058474|ref|ZP_07922959.1| amino acid-binding protein [Fusobacterium sp. 3_1_5R] gi|313684150|gb|EFS20985.1| amino acid-binding protein [Fusobacterium sp. 3_1_5R] Length = 241 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 14/212 (6%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 L G N F + G GFD++ AL+ + D ++ + ALQ Sbjct: 26 KTLYIGTNAEFAPFEYL-EKGKVTGFDMELMNALAKEMKMD---VKIENMAFDGLLPALQ 81 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAG 153 K++D++ T R+ ++F + Q I K K I +LSG + V G Sbjct: 82 MKKVDVVIAGMTETPERKK--AVSFTKPYFKAKQVIITKKGKDIKDFKELSGKRVGVMLG 139 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 T + ++D A F+ A + DA D + + Sbjct: 140 FTGDAVVSDIKGAK-----VQRFDATYSAVMALEKGKVDAVVADSEPAKKYIASYK---D 191 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 I + A A+ + D + ++ Sbjct: 192 LAIASAKAEEEDYAIAVRKNDKALLDNLNKAL 223 >gi|227529156|ref|ZP_03959205.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] gi|227351000|gb|EEJ41291.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] Length = 501 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 84/234 (35%), Gaps = 15/234 (6%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA---NGDWKGFDVDFCRALSSAIFDD 74 TS L IK++G L G + + + GF+V + + I Sbjct: 39 TSQVAENDSLQKIKQKGTLVVGTSADYPPYEFTTKEHGKTKYVGFEVSLMKQFAKDIGVK 98 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK- 133 + ++ +AL++ +ID ++ + T R+ + F + Y F+++K Sbjct: 99 ---LVIKNMDFDSLLVALETGKIDCIAGAMNITNERKK--SVDFSDVYYTGDSYFLINKS 153 Query: 134 -KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K + + +G ++ Q GT ++ N K ++ + ++H+ D Sbjct: 154 DKDKLVNAKSFNGKTVGAQNGTLQSTMISKDMPQANGKG----LAKLSSLVIGLQSHKYD 209 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 D + A N ++ +A A +GDT N + T Sbjct: 210 GVLMDAATAKAYASNNSNLYAFNS-KLPVTAGGIALAFPKGDTSLVNAANQTIK 262 >gi|190893858|ref|YP_001980400.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] gi|218514413|ref|ZP_03511253.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli 8C-3] gi|190699137|gb|ACE93222.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] Length = 257 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 69/233 (29%), Gaps = 14/233 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + L IK G K G F +G GFDV+ A+++ + + Sbjct: 21 AHAGENLAAIKSAGVFKIGTEGTYAPFTYHDESGKLVGFDVEIGEAIAAKLGVKAE---F 77 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISS 139 + L +K+ D + T R+ F I+ + I + Sbjct: 78 VEGKWDGLIAGLDAKRYDTVINQVGITEARK--QKYDFSEPYIASKAVLIVREGDDSIKT 135 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G Q+ T+ LA A + + ++ R DA D Sbjct: 136 FADLKGKKSA-QSLTSNFGKLATEAGA-----ELVGTDGFDQSIQLVLTKRADATINDSL 189 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + K + + I + + E ++ A + A+ Sbjct: 190 SFLDFKKHKPDAPVKIAAQQ-ENADYSGIIIRKNEPELLAEINKAL-ADIKAD 240 >gi|300728068|ref|ZP_07061441.1| cyclohexadienyl dehydratase [Prevotella bryantii B14] gi|299774670|gb|EFI71289.1| cyclohexadienyl dehydratase [Prevotella bryantii B14] Length = 289 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 36/274 (13%), Positives = 88/274 (32%), Gaps = 31/274 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI------------------LGDIKKRGFLKCGINT 42 M + + ++L S + + + I +RG L G Sbjct: 1 MKRYKLWVLTVWLVLGSLSALASCTTSDSGVHDQEGTDVPRTGKIAQIVERGKLLVGTTG 60 Query: 43 GLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK--QIDIL 100 + +A G++ GF ++ ++ I D I ++P + + + D Sbjct: 61 DYRPLSYREAEGNYWGFGIEMAEKIAQRIGVD---ITFVPTSWPTLSADVMADPQTFDFA 117 Query: 101 SRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTEL 158 T R+ ++ + +G+ + + S++ + +CV Sbjct: 118 IGGITITDSRKTAMLM--SDGYLCNGKTILCRAGDAQRFQSLADIDRPEVCVMVNPGGLN 175 Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 + + +V+ + EEI + D +I+ + ND +L Sbjct: 176 --EKFAREQLSHATIVVYPQNEEIPSQVAEGHADVMITEITE-APWYVQNDTRLAAPLLS 232 Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + + + +G + +V+ A + A+ Sbjct: 233 TPFTHGEIGVLMRKGQDDLLALVNAVI-AQMKAD 265 >gi|255284290|ref|ZP_05348845.1| glutamine ABC transporter, permease/substrate-binding protein [Bryantella formatexigens DSM 14469] gi|255265184|gb|EET58389.1| glutamine ABC transporter, permease/substrate-binding protein [Bryantella formatexigens DSM 14469] Length = 260 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 72/240 (30%), Gaps = 15/240 (6%) Query: 1 MYKDF---FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K+F VS + L + + S + +T F A+G++ Sbjct: 1 MKKNFTAKLVSAAAVGALALCTMAGAVSASDKV-----WVIATDTAFRPFEYTNADGEFV 55 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DVD A++ + + A+Q Q D L R G Sbjct: 56 GIDVDILAAIAEDQGFEYD---LQSIGWDAGVAAVQVGQADGLIAGATINDER-KEKGWI 111 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y Q F + I+S+ L G ++ V+ GT ++ + E Sbjct: 112 FSDGYYDATQSFFVAADSDIASLEDLEGKNVVVKIGTASKTFAESLMDEYGF--TVTTME 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ A D A + + + +P AI+ + Sbjct: 170 TSTDMYQDVINGNSAACIDDTPITLAYITQDGVQLKKLEAEGAESESAPYGFAIMDEANQ 229 >gi|27382023|ref|NP_773552.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] gi|27355193|dbj|BAC52177.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 296 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 81/254 (31%), Gaps = 11/254 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + + + F + + A +IK RG + GI + V A G G+D Sbjct: 28 RRLLALGAATIAAPFVLTRAAYAVTPSEIKARGKVLIGIQGDNPPWGFVDATGKQDGYDA 87 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + + + ++ L R AL S ++DIL R + F Sbjct: 88 EISALFARELG---VPAEFTQLAVANRIPALTSGRVDILFATMAMLPERAK--AVQFSKP 142 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + FI K+ I S + + I V G+ + D KA F+ Sbjct: 143 YGANIITFIAPKEFEIKSPADMGKYVIGVARGSVQDS---DVTKAAPSGTTIRRFDGDAP 199 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 A + + A G+ Y +L +P + + +K G+ E Sbjct: 200 TMQALLSGQVQAVGGN--IFYVPRLDESKPGYYENKLE-FTKLYNGACTRLGEKEINAFA 256 Query: 242 SWTHYAMVTAEELG 255 + + EL Sbjct: 257 NDFIEKIRANGELA 270 >gi|325685063|gb|EGD27198.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 485 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 49/242 (20%), Positives = 91/242 (37%), Gaps = 20/242 (8%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK----GFDVDFCRAL 67 + LF T+ A+ + G + F +G + G D++ R + Sbjct: 18 IAALFLTAPKAQAAS------KKTYIIGTDQTFKPFEIQDKDGTYNGKNPGIDIEILREI 71 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + K + ++ ALQS QID + T R+ + + F Y DG Sbjct: 72 AK---HENFKYELKIMSFNADVQALQSGQIDGMIAGMSVTEERKKT--IDFSNSYYTDGV 126 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + K I+S+ L G ++ V+ GTT+ + K + K + A + Sbjct: 127 CLAVAKDSKITSMKDLKGKTVNVKTGTTSAIYAKSIQKKYGFK--LKYYTNSNTSWADVK 184 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 A DA D +L+ + I+ +S +PLA A+ +G+ + + A Sbjct: 185 AGNADACFDDGP---SLRYGIANGTGLRIVGKQVSNAPLAFAVKKGENQELLKMFNDGLA 241 Query: 248 MV 249 + Sbjct: 242 WL 243 >gi|295398457|ref|ZP_06808496.1| amino acid ABC superfamily ATP binding cassette transporter [Aerococcus viridans ATCC 11563] gi|294973321|gb|EFG49109.1| amino acid ABC superfamily ATP binding cassette transporter [Aerococcus viridans ATCC 11563] Length = 506 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 88/275 (32%), Gaps = 41/275 (14%) Query: 1 MYKDFFVSILCLIILFFTSFS---------TNASILG--------------DIKKRGFLK 37 M + V + ++ + S S + AS + DIK RG L+ Sbjct: 4 MKQIILVCMTLVLAMVGLSQSPVLATEEGQSAASTIDASEATAPGEDTLYQDIKDRGVLR 63 Query: 38 CGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 G N+ F G D+ + ++ + D + + +L + Sbjct: 64 VGTNSTYAPFEFSILKDGKNQVVGLDIFLAQKIADDLGVDLEVVD---MEFSNLLTSLDT 120 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYF--DGQGFIMHKKKGISSVSQL-SGASICVQ 151 QIDI+ T R + F I K I+ S +G I + Sbjct: 121 GQIDIVLAGMTSTEERAK--SVDFSDIYQVSGQSFVIQESKVSEITDDSYFSNGGKISIG 178 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 GTT +L + +Y+ V + +A + D D A + P Sbjct: 179 EGTTQQLLVGEYYP----NSEVQVMRTTTDSISALDSGLVDGVLLDED--VAGAYAAENP 232 Query: 212 SEHVILPDIISKSP-LAPAIIQGDTEWYNIVSWTH 245 S VI ++ + P A A+ + V+ + Sbjct: 233 SLTVIEANLPIQDPGKAAAMPKDQPTLQAAVNKSI 267 >gi|319401122|gb|EFV89341.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Staphylococcus epidermidis FRI909] Length = 485 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 77/251 (30%), Gaps = 16/251 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 M + + + S N IK RG L+ G++ + ++ Sbjct: 7 MLSIIILMLSTFTLFISPSTYANEDENWTKIKNRGELRVGLSADYAPLEFEKTIHGKTEY 66 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D++ + ++ + K++ + + AL++ +IDI+ T R+ + Sbjct: 67 AGVDIELAKKIAKD---NHLKLKIVNMQFDSLLGALKTGKIDIIISGMTTTPERKK--EV 121 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F ++ K + ++ G +I Q GT E + Sbjct: 122 DFTKPYMITNNVMMIKKDEAKRYQNIKDFEGKNIAAQKGTDQEKIAQTEIE----DSKIS 177 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 R+ E + ++ + + A N K A+ + Sbjct: 178 SLNRLPEAILSLKSGKVAGVVVEKPVGEAYLKQNSE-LTFSKTKFNEEKKQTCIAVPKNS 236 Query: 235 TEWYNIVSWTH 245 + ++ T Sbjct: 237 PVLLDKLNQTI 247 >gi|323351404|ref|ZP_08087060.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] gi|322122628|gb|EFX94339.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] Length = 729 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 59/206 (28%), Gaps = 16/206 (7%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F +L L F + A +K +T F ++ +KG DVD Sbjct: 12 FLAVLLTLFPFFALGATAQADT---------VKIVSDTAYAPFEFKDSDQTYKGIDVDII 62 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ D I A+Q+ Q D + T RE Y Sbjct: 63 NKVAEIKGWD---IDMSFPGFDAAVNAVQAGQADAIMAGMTKTSEREKV--FTMSDTYYD 117 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 K IS QL G + V+ GT + L + F+ + + Sbjct: 118 TKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKNKDKYGF--TLKTFDTGDLMYN 175 Query: 185 AYRAHRCDAYTGDISALYALKLTNDR 210 + A DA D + Sbjct: 176 SLSAGDVDAVMDDQPVIEYAINQGQN 201 Score = 89.4 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 29/258 (11%), Positives = 71/258 (27%), Gaps = 20/258 (7%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + S ++ F + + G D++ +A++ Sbjct: 266 STPAGQKATSTKDK------YIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QG 316 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 ++ ++Q+ Q D + T R+ + + Y + Sbjct: 317 FTVEVTNPGFDAAINSVQTGQADGIIAGMSVTDARKKT--FDYSDPYYTANSILAVKDSS 374 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S +L G ++ V+ GT ++ L + + F + + A Sbjct: 375 NIKSYEELKGKTVGVKTGTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVM 432 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + + L I +P A ++ + + +E Sbjct: 433 DDEPVVKYAIKQGKK------LKTPIEGTPSGQVAFAVKKGSNPELIEMFNNGLANLKES 486 Query: 255 GITQKNINQVSKDTTNPD 272 G Q+ +++ Sbjct: 487 GKYQEILDKYLASEEKES 504 >gi|255264524|ref|ZP_05343866.1| prephrenate dehydratase [Thalassiobium sp. R2A62] gi|255106859|gb|EET49533.1| prephrenate dehydratase [Thalassiobium sp. R2A62] Length = 259 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 90/244 (36%), Gaps = 13/244 (5%) Query: 4 DFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61 FF ++L ++ + NA S L +I G LK G A ++G+D+ Sbjct: 2 KFFKIAATAVVLATSAVAANAQSSLNEILSSGVLKVGTTGDWNPMTMRDVATNTYEGYDI 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D AL++ + + ++++P + K + S Q ++ + + R + G + Sbjct: 62 DVMTALAADLGVE---VEFVPTDWKTLVSGVTSGQYH-ITGSASVSPSRAKAAGYSNSYF 117 Query: 122 TYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + S L+ G S+ GTT E + +F + Sbjct: 118 SLVTVPLMLKSNMDNFDSWESLNMEGVSVAATLGTTQETQVKQFFPNAEHRIVEAPARDF 177 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E+ + R DA L D+ V + + +P+A + Q D W N Sbjct: 178 QEVL----SGRADASITSNVEANKLVAQYDQ-LMIVPVEAGRAPTPVAMLLPQADQVWIN 232 Query: 240 IVSW 243 ++ Sbjct: 233 YINT 236 >gi|325690565|gb|EGD32568.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK115] Length = 729 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 59/206 (28%), Gaps = 16/206 (7%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F +L L F + A +K +T F ++ +KG DVD Sbjct: 12 FLAVLLTLFPFFALGATAQADT---------VKIVSDTAYAPFEFKDSDQTYKGIDVDII 62 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ D I A+Q+ Q D + T RE Y Sbjct: 63 NKVAEIKGWD---IDMSFPGFDAAVNAVQAGQADAIMAGMTKTSEREKV--FTMSDTYYD 117 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 K IS QL G + V+ GT + L + F+ + + Sbjct: 118 TKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKNKDKYGF--TLKTFDTGDLMYN 175 Query: 185 AYRAHRCDAYTGDISALYALKLTNDR 210 + A DA D + Sbjct: 176 SLSAGDVDAVMDDQPVIEYAINQGQN 201 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 28/258 (10%), Positives = 71/258 (27%), Gaps = 20/258 (7%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + + ++ F + + G D++ +A++ Sbjct: 266 STPAGQKASPTKDK------YIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QG 316 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 ++ ++Q+ Q D + T R+ + + Y + Sbjct: 317 FTVEVTNPGFDAAINSVQTGQADGIIAGMSVTDARKKT--FDYSEPYYTANSILAVKDSS 374 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S +L G ++ V+ GT ++ L + + F + + A Sbjct: 375 NIKSYEELKGKTVGVKTGTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVM 432 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + + L I +P A ++ + + +E Sbjct: 433 DDEPVVKYAIKQGKK------LKTPIEGTPSGKVAFAVKKGSNPELIEMFNNGLANLKES 486 Query: 255 GITQKNINQVSKDTTNPD 272 G Q+ +++ Sbjct: 487 GKYQEILDKYLASEEKES 504 >gi|322516689|ref|ZP_08069599.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] gi|322124783|gb|EFX96218.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] Length = 224 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 46/213 (21%), Positives = 90/213 (42%), Gaps = 16/213 (7%) Query: 3 KDFFVSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGFAEVKA 52 + F +S L + + + + N++ + I K+G L G+ + F A Sbjct: 8 RIFAISALAFVAVLLWNTKSSQADERSKLLNSAAIQKIVKKGTLNVGVKQDVPNFGYYSA 67 Query: 53 N-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 ++G ++D K+ + + + R + + ID+L T R+ Sbjct: 68 KTNTYQGMEID---LAKKIAKKLKVKVNFTAVTPQTREALMDNGTIDMLIATYTITDERK 124 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 S + Y+D GF++ K G +S L+G +I V G++ + + +Y A+N+K+ Sbjct: 125 ASYAM--SNPYYYDQIGFLVQTKSGYKKLSDLNGKTIGVSQGSSAKTAVEEYASANNLKF 182 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 + E+ + A+R DA+ GD S L Sbjct: 183 DYVQLGSYPELAVSLYAYRIDAFAGDKSILSGY 215 >gi|227890645|ref|ZP_04008450.1| glutamine-binding protein / glutamine transport system permease protein [Lactobacillus salivarius ATCC 11741] gi|227867583|gb|EEJ75004.1| glutamine-binding protein / glutamine transport system permease protein [Lactobacillus salivarius ATCC 11741] Length = 485 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 73/236 (30%), Gaps = 13/236 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + + L F SF ++ + F + + G D Sbjct: 1 MKK-FITFLSIISSLIFLSFFVKPQLVHA--DEKTYTIATDVTFPPFEYANDSNKYVGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + K+ P+ ++ + Q+D + T R+ F Sbjct: 58 IDLMNAIAKE---EGFKVDLKPIGFNAALQSVSAGQVDGMIAGMTITDERK--QKFDFSK 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + I S+ QL G + ++ GT+ + K + F+ + Sbjct: 113 PYYSSGIVMAVKPDSSIKSLKQLRGKKVAIKTGTSGADYANSIKDKYGFKT--VTFDDSD 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + A D L+ I+ + A+ +G + Sbjct: 171 NMYNDVKNGNSVACFED---SAVLEYGISTGLGLKIVTKPANSGNFGFAVKKGTHQ 223 >gi|323489868|ref|ZP_08095092.1| extracellular solute-binding protein [Planococcus donghaensis MPA1U2] gi|323396503|gb|EGA89325.1| extracellular solute-binding protein [Planococcus donghaensis MPA1U2] Length = 261 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 87/242 (35%), Gaps = 16/242 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-----GDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K +++L ++L + ++ S K GI+T F + +G+ Sbjct: 1 MKKWSLLALLMAMMLVIAACGSDESEDTTEGGESGSDAKTYKVGIDTTYPPFEF-EVDGE 59 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G D+D A++ + +I++ P++ ALQ+ Q+D+ T R+ Sbjct: 60 YTGIDIDLITAIAE---NQGFEIEFSPMDFGGIIPALQADQLDVAIAGMSITDERKAV-- 114 Query: 116 LAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + F + G ++ I+S+ L G ++ V++GTT D + Sbjct: 115 VDFSDPYFDAGLSLVVAEDNSEITSLDDLEGKTVAVKSGTTGAQFARDNEAEYGY--TVA 172 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 FE + D + + + D ++ A+++G Sbjct: 173 QFEDSPSMFQEVSNGNAAVLLEDYPVIA--YAIAESGLSLKTVGDRLTGDQYGIAVLKGQ 230 Query: 235 TE 236 Sbjct: 231 NA 232 >gi|325695929|gb|EGD37820.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK160] Length = 729 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 59/206 (28%), Gaps = 16/206 (7%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F +L L F + A +K +T F ++ +KG DVD Sbjct: 12 FLAVLLTLFPFFALGATAQADT---------VKIVSDTAYAPFEFKDSDQTYKGIDVDII 62 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ D I A+Q+ Q D + T RE Y Sbjct: 63 NKVAEIKGWD---IDMSFPGFDAAVNAVQAGQADAIMAGMTKTSEREKV--FTMSDTYYD 117 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 K IS QL G + V+ GT + L + F+ + + Sbjct: 118 TKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKNKDKYGF--TLKTFDTGDLMYN 175 Query: 185 AYRAHRCDAYTGDISALYALKLTNDR 210 + A DA D + Sbjct: 176 SLSAGDVDAVMDDQPVIEYAINQGQN 201 Score = 89.4 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 28/258 (10%), Positives = 71/258 (27%), Gaps = 20/258 (7%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + + ++ F + + G D++ +A++ Sbjct: 266 STPAGQKASPTKDK------YIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QG 316 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 ++ ++Q+ Q D + T R+ + + Y + Sbjct: 317 FTVEVTNPGFDAAINSVQTGQADGIIAGMSVTDARKKT--FDYSDPYYTANSILAVKDSS 374 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S +L G ++ V+ GT ++ L + + F + + A Sbjct: 375 NIKSYEELKGKTVGVKTGTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVM 432 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + + L I +P A ++ + + +E Sbjct: 433 DDEPVVKYAIKQGKK------LKTPIEGTPSGKVAFAVKKGSNPELIEMFNNGLANLKES 486 Query: 255 GITQKNINQVSKDTTNPD 272 G Q+ +++ Sbjct: 487 GKYQEILDKYLASEEKES 504 >gi|317484848|ref|ZP_07943740.1| bacterial extracellular solute-binding protein, family 3 [Bilophila wadsworthia 3_1_6] gi|316923894|gb|EFV45088.1| bacterial extracellular solute-binding protein, family 3 [Bilophila wadsworthia 3_1_6] Length = 247 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 71/216 (32%), Gaps = 9/216 (4%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L + + N + G+ +D+ +A++ +++ F AL+S+ Sbjct: 26 LIVASDATWPPIEMLDENKNVVGYSIDYLKAVAKEAG---LNVEFRNTAWDGIFAALESR 82 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 Q DI++ + T R+ ++G F Q ++ + ++ +L G + Q GTT Sbjct: 83 QADIIASSVTITDKRKKAMG--FSDPYCEIRQAVVVSTNSDLKNLKELDGKKVGGQIGTT 140 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEH 214 L + K ++ V DA D + Sbjct: 141 G---LVETLPKAKSKAIVKTYDEVGLALEDLAKGNIDAVICDDPVAKFYANKKQEYAGKL 197 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + A+ + DT+ ++ A+ Sbjct: 198 KVAFITDDVEFYGFAVRKSDTDLVKKLNEGIKAVKE 233 >gi|256830135|ref|YP_003158863.1| extracellular solute-binding protein family 3 [Desulfomicrobium baculatum DSM 4028] gi|256579311|gb|ACU90447.1| extracellular solute-binding protein family 3 [Desulfomicrobium baculatum DSM 4028] Length = 246 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 70/226 (30%), Gaps = 13/226 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 L +T F +G GFDV+ A++ I + P++ Sbjct: 20 SAKKLIVATDTNFPPFEFKDPESGKHTGFDVELWDAIAKEIGAEYD---LQPMDFNGIIP 76 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASIC 149 LQS QID+ R + F Y G ++ I+ V L+G + Sbjct: 77 GLQSGQIDVGIAGITIKPERAEV--VDFSDPYYNAGLLILVKADNAEITDVKSLAGKIVA 134 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + GTT+E A +F + + A DA D + T Sbjct: 135 TKLGTTSEDFAKKEAGAK----EVKLFPNNDAMFMELMAGGADAVIFDSPVISEFVRTVG 190 Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + I+ + +G ++ V+ + + Sbjct: 191 K-EQTKIVGPLYMGQSYGIGFPKG-SDLVAKVNEALKKLKDSGAYR 234 >gi|254517676|ref|ZP_05129732.1| amino acid ABC transporter ATP-binding protein [Clostridium sp. 7_2_43FAA] gi|226911425|gb|EEH96626.1| amino acid ABC transporter ATP-binding protein [Clostridium sp. 7_2_43FAA] Length = 253 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 41/264 (15%), Positives = 83/264 (31%), Gaps = 28/264 (10%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE--VKANG--DWKGFDVDFCRALS 68 + L S L IK G L G++ + + NG GFDVD + ++ Sbjct: 1 MGLGLISCGAKKDKLSAIKDSGKLVVGLSADYAPYEFHILDENGQDQIVGFDVDIAKEIA 60 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + + ++ +N + + S +ID+ R+ + F I Y G Sbjct: 61 KDLGVE---LELQDMNFENLVAGVSSGKIDLAISGMTPDEERKK--AIDFSEIYYVAEHG 115 Query: 129 FIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++ + + L G + Q G + + V ++ A Sbjct: 116 MLVRAEDKDKYKTFENLKGQKVGAQMGAIQAKIAEEKVPEA----DLQLLSNVNDLVLAL 171 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEWYNIVSWTH 245 + + +A ++ A + + P + + A I + ++ T Sbjct: 172 KGGKIEALVVELP--VAEMIVKNNPELIIAEEKVKDTEGGSAVGIQKNQEALVEQINSTI 229 Query: 246 Y----------AMVTAEELGITQK 259 ++ A EL QK Sbjct: 230 NRIKEEKLLDQFIIEANELAEKQK 253 >gi|170701774|ref|ZP_02892709.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170133322|gb|EDT01715.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 259 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 77/220 (35%), Gaps = 13/220 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ GI F G GFDVD A+ + + K ++ ALQ+ Sbjct: 26 TLRFGIEAAYPPFESKSPAGQLHGFDVDIGNAVCAKL---NMKCVWVENAFDGLIPALQA 82 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAG 153 ++ D ++ + T R+ + F P Y + H+ + + L G + V G Sbjct: 83 RKFDAINSAMNITAKRK--QSIDFTPAIYVVPIVMVAHRGSPLRPDAASLRGKHVGVLQG 140 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 ++ E L ++ + + + ++I A A R DA + L + Sbjct: 141 SSQEDFLKAHWANAGVA--VVSYPDQDQIYADLVAGRLDAAVQEAQTAQDGFLDKPAGRD 198 Query: 214 HVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248 + I+ + + + +GD + A+ Sbjct: 199 YQIVGEPLKDAATLGEGTGFGMRKGDKALQTKIVGALDAL 238 >gi|323339948|ref|ZP_08080215.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ruminis ATCC 25644] gi|323092590|gb|EFZ35195.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ruminis ATCC 25644] Length = 482 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 75/256 (29%), Gaps = 13/256 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + + LF F+ S ++ + F + + G D Sbjct: 1 MKK-FVSMLCAFLGLFMIGFTVQPSSTAQASEK-TYVIDTDVTFPPFVYANEDNKYVGID 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D RA++ + KI+ P+ ++ S Q D + T R+ F Sbjct: 59 MDLIRAIAKE---EGFKIKIRPVGFNAAVQSVSSGQADGVIAGMSITDERKA--KFDFSD 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + + S+ L G + V+ GT+ + K + F+ + Sbjct: 114 PYYSSGIVMGVKPNGDVKSLKDLKGKKVAVKTGTSGADYANSIKDKYGFK--VVTFDDSD 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYN 239 + + D L I + A+ + + E Sbjct: 172 NMYNDVKNGNSAGCFED---SAVLAYGVKTGLGLKIATKSTNIGDYGFAVKKGHNKELMK 228 Query: 240 IVSWTHYAMVTAEELG 255 + + + E Sbjct: 229 MFNEGLAKLKKNGEYD 244 >gi|15611942|ref|NP_223593.1| amino acid ABC transporter [Helicobacter pylori J99] gi|4155451|gb|AAD06455.1| putative AMINO ACID ABC TRANSPORTER, BINDING PROTEIN PRECURSOR [Helicobacter pylori J99] Length = 257 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 33/251 (13%), Positives = 75/251 (29%), Gaps = 14/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +S L L+I F F +S+ + + + G F G G+D Sbjct: 1 MKK---ISCLLLVISLFGGFLNASSLYEKLVNKETISVGTEGIYPPFTYHDKEGKLTGYD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R L+ + I++ + L+S + D+++ T ++ Sbjct: 58 VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQAAFDKSL 113 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G ++ K I + + G +T A + + + Sbjct: 114 PYSYSGTIMLVRKDENRIKDIRDIKGLKAANTLSSTYGEI------AFKYDAQIVSVDSM 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R D A+ T+ + + I + + Sbjct: 168 AQALLLVAQKRADLTLNSSLAILNYLNTHKNSPFKIAWESKEKDGGASFVINKHQEKALE 227 Query: 240 IVSWTHYAMVT 250 +++ ++ Sbjct: 228 LINQAMRRLIN 238 >gi|327470838|gb|EGF16294.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK330] Length = 729 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 59/206 (28%), Gaps = 16/206 (7%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F +L L F + A +K +T F ++ +KG DVD Sbjct: 12 FLAVLLTLFPFFALGATAQADT---------VKIVSDTAYAPFEFKDSDQTYKGIDVDII 62 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ D I A+Q+ Q D + T RE Y Sbjct: 63 NKVAEIKGWD---IDMSFPGFDAAVNAVQAGQADAIMAGMTKTSEREKV--FTMSDTYYD 117 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 K IS QL G + V+ GT + L + F+ + + Sbjct: 118 TKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKNKDKYGF--TLKTFDTGDLMYN 175 Query: 185 AYRAHRCDAYTGDISALYALKLTNDR 210 + A DA D + Sbjct: 176 SLSAGDVDAVMDDQPVIEYAINQGQN 201 Score = 89.0 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 28/241 (11%), Positives = 70/241 (29%), Gaps = 14/241 (5%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 + ++ F + + G D++ +A++ ++ ++ Sbjct: 277 KDKYIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QGFTVEVTNPGFDAAINSV 333 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152 Q+ Q D + T R+ + + Y + I S +L G ++ V+ Sbjct: 334 QTGQADGIIAGMSVTDARKKT--FDYSDPYYTANSILAVKDSSNIKSYEELKGKTVGVKT 391 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT ++ L + + F + + A D + + Sbjct: 392 GTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVMDDEPVVKYAIKQGKK-- 447 Query: 213 EHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 L I +P A ++ + + +E G Q+ +++ Sbjct: 448 ----LKTPIEGTPSGQVAFAVKKGSNPELIEMFNNGLANLKESGKYQEILDKYLASEEKE 503 Query: 272 D 272 Sbjct: 504 S 504 >gi|194292630|ref|YP_002008537.1| high affinity periplasmic solute-binding protein; high affinity transport system [Cupriavidus taiwanensis LMG 19424] gi|193226534|emb|CAQ72485.1| high affinity periplasmic solute-binding protein; high affinity transport system [Cupriavidus taiwanensis LMG 19424] Length = 276 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 96/252 (38%), Gaps = 16/252 (6%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAI 71 + + + + L IK+RG + G+ G F + G++ D R L+ + Sbjct: 15 LSCLAVNAAWADATLDRIKQRGKVSIGVLVGGSLFGSIDPVTQQLVGWNPDLARDLAKRL 74 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 + + + R LQ ++D+L + ++ R LG A P G ++ Sbjct: 75 GVEAELVP---VQPSNRVQFLQQGKVDLLIASMEYNAERGELLGHAPTPFYRVGGTAAVL 131 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 K+ GI+ L G ++C G++ L + + A F+ E A R +C Sbjct: 132 -KRSGIAKWDDLRGKTVCASQGSSYVKPLQEQYGA-----QVRGFKTSAESLLALRGGQC 185 Query: 192 DAYTGDISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEWYNIVSWTHY---- 246 A D + ++ L +N +++ +P I +P +G+T+ V Sbjct: 186 VAAVHDATLIHPLVRSNADWTDYAAPIPAEILPAPSVVWTRKGETDTIAAVDKIVQEWHR 245 Query: 247 -AMVTAEELGIT 257 + A E + Sbjct: 246 SGWLIATEKRLG 257 >gi|153011344|ref|YP_001372558.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151563232|gb|ABS16729.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 270 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 72/215 (33%), Gaps = 10/215 (4%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G F A+G ++GF++D + +P Y + F A S+ Sbjct: 35 LNIGAYPSNPPFELKNADGTFEGFEIDIATEAAKRAGLEPEIADY---GFQALFAATTSR 91 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 +ID+ + T R +F Y G ++ ++ L G ++ +G+T Sbjct: 92 RIDVAVSSITITPER--LKSQSFTQPYYDSDIGVATKTDSAVTGLADLKGKTVGALSGST 149 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 E + + +A + +++ A R DA DI + L L Sbjct: 150 GEKWVKENKEAKGF-ADIKGYNSQQDLFLDLGAGRIDAVISDIPGMEHLFLKMKG---FA 205 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + I + + + ++ AM Sbjct: 206 VKDRIQTGEQYGLMMAKDHP-LLGKLNDAITAMKQ 239 >gi|218509493|ref|ZP_03507371.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli Brasil 5] Length = 237 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 65/226 (28%), Gaps = 13/226 (5%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + L IK G K G F +G GFDV+ A+++ + + Sbjct: 21 AHAGENLAAIKSAGVFKIGTEGTYAPFTYHDESGKLVGFDVEIGEAIAAKLGVKAE---F 77 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISS 139 + L +K+ D + T R+ F I+ + I + Sbjct: 78 VEGKWDGLIAGLDAKRYDTVINQVGITEARK--QKYDFSEPYIASKAVLIVREGDDSIKT 135 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + L G Q+ T+ LA A + + ++ R DA D Sbjct: 136 FADLKGKKSA-QSLTSNFGKLATEAGA-----ELVGTDGFDQSIQLVLTKRADATINDSL 189 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + K + + I + + E ++ Sbjct: 190 SFLDFKKHKPDAPVKIAAQQ-ENADYSGIIIRKNEPELLAEINKAL 234 >gi|319950979|ref|ZP_08024850.1| extracellular solute-binding protein [Dietzia cinnamea P4] gi|319435361|gb|EFV90610.1| extracellular solute-binding protein [Dietzia cinnamea P4] Length = 300 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 72/216 (33%), Gaps = 14/216 (6%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 A + +I+ +G + G N NG+ GFD+D A++ + + ++ Sbjct: 52 AALVPAEIRDKGVIVIGTNPPYAPNEFKDENGEIVGFDIDVMTAVAQLMG---LRAEFRE 108 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 + A++ +D+ + + R + + F + G + + Sbjct: 109 SDFDRIIPAIEGGTMDMGASSFTVNDERLKT--VDFV-TYFEAGIQWASAAGNDV-DPDD 164 Query: 143 LSGASICVQAGTTTELT-----LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 G S+ VQ T ++ A + F+ +E A + DA + D Sbjct: 165 ACGLSVAVQQTTVSDQEDVPARSKACTDAGKPAIEKVQFDSQDEASTAVALGKVDAMSAD 224 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 ++ + D+ +P + +G Sbjct: 225 SPITAYAVKQSEGKMQL--AGDVFDAAPYGWPVRKG 258 >gi|292558362|gb|ADE31363.1| Amino acid ABC transporter,3-TM region containing permease protein [Streptococcus suis GZ1] Length = 490 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 66/210 (31%), Gaps = 15/210 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + ++ +FF IK + + F ++ +KG D Sbjct: 3 MKKKLLMLLASILPVFFIFTG--------IKADDTIDVVFDNAYAPFEFKDSDQIYKGLD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ ++ A+Q+ D L T T R+ F Sbjct: 55 VDIINEVAKRSGWTMNQ---SFPGFDAAVNAVQAGSADALMAGTTITEARKKV--FTFSD 109 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + K ISS L G ++ V+ GT + L + + + F+ + Sbjct: 110 PYFDTKIVIATTKANTISSYKDLKGKTVGVKNGTAAQNFLEENKDKYGY--NVKTFDTGD 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + A DA D + + Sbjct: 168 LMYNSLSAGAVDAVMDDEAVIQYAIQQGQD 197 Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 35/237 (14%), Positives = 72/237 (30%), Gaps = 15/237 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L T ++ + +K + ++ F +G++ G D++ +A++ Sbjct: 264 LSLTGNASAKATP--VKSSYTIVA--DSSFAPFEYQDESGNYVGIDMELIKAIAE---HQ 316 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 I A+Q+ Q D + T R+ F Y + Sbjct: 317 GFTITIQNPGFDAALNAVQAGQADAVIAGMSITDARKEI--FDFSNAYYTSNILLAVKNG 374 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+S L G ++ + GT + L + Y F+ + + + DA Sbjct: 375 SDIASYEDLKGKTVGAKNGTASYSFLEEN--KSKYGYTLKAFDEASSMYDSLNSGSIDAL 432 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVT 250 D L + A+ +G + E + + A+V Sbjct: 433 MDDE---AVLLYAIQQGRNFATPIPGEKSGEYGFAVKKGANPELIEMFNNGLAALVE 486 >gi|217422247|ref|ZP_03453750.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 576] gi|217394478|gb|EEC34497.1| glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein [Burkholderia pseudomallei 576] Length = 240 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 74/219 (33%), Gaps = 6/219 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSKI 78 +A L I + V F + GF D A+ + +I Sbjct: 15 HARTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVVDDVRKKLKMPGLQI 74 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Y+P+ + R L + D+ +T T R ++F ++ G ++ K I Sbjct: 75 AYIPVTGQNRNPLLVNDTYDLEGGSTTNTAAR--GQDVSFSISLFYAGTRVLVKKASRIR 132 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G ++ AG+T E + Y H++ + + + R D Sbjct: 133 GYADLAGKTVATAAGSTNENVIRKYAADHHLDIDVVPAKNYAAGPRMVESDRTAVLALDD 192 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 L+ ++ P + D + P + +GD Sbjct: 193 VLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDPAS 231 >gi|134298611|ref|YP_001112107.1| extracellular solute-binding protein [Desulfotomaculum reducens MI-1] gi|134051311|gb|ABO49282.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfotomaculum reducens MI-1] Length = 260 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 78/251 (31%), Gaps = 17/251 (6%) Query: 2 YKD--FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 K F ++++ + L T+ S + ++ F G GF Sbjct: 4 KKSIAFLLTLIIISTLVVGCGGTSNSTSAT-PDKKKFHYAMSGLYKPFNYKDG-GKLVGF 61 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ ++ I + + + + L++ + D + + T R + F Sbjct: 62 DVEIGEEIARRIGMEAAPVT---NPWETIIQGLKANKYDAIIGSMAITEER--QEQVDFS 116 Query: 120 -PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 P Q F+ I+S L G I V +T +Y N I ++ Sbjct: 117 RPYYRSGAQVFVSSNNDSITSAKDLKGKKIGVVKASTFRNVALEYTDKKN----VIGYDS 172 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 R DA D + + + +A + +G+TE Sbjct: 173 DVIALQDLPTGRVDAVITDQMVGIVAI---KNGLKIKDVDKPLWVDEMAIPVNKGNTELV 229 Query: 239 NIVSWTHYAMV 249 N ++ M+ Sbjct: 230 NKINNALDEMI 240 >gi|293568103|ref|ZP_06679440.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1071] gi|294617429|ref|ZP_06697063.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1679] gi|291589185|gb|EFF20996.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1071] gi|291596335|gb|EFF27594.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1679] Length = 500 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 88/273 (32%), Gaps = 28/273 (10%) Query: 1 MYKD-----FFVSILCLIILFF----------TSFSTNASILGDIK-KRGFLKCGINTGL 44 M + F + L+ L F T+ S+ + + I+ K+ ++ Sbjct: 1 MKRKHLFHSFVFLMTGLVTLAFGHVAQADNTTTAESSTSETMQKIEPKKDVYVIASDSAF 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F A G+++G DV ++ I+ AL+S Q D + Sbjct: 61 APFEFQNAKGEYEGIDVKLMENIAK---LQGFNIRMDYRGFSAALQALESGQADGMIAGM 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADY 163 T R+ F + G + K I S L G ++ + GT + L+D+ Sbjct: 118 TVTDERKK--SYDFSDSYFDSGIQLAVKKGDTSIKSYEDLKGKTVGAKVGTESAEFLSDH 175 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + F+ +++ + DA D + + E + S Sbjct: 176 ESEYGYS--IKYFDAADQLYDGLKVGAIDAMMDDYPVIG---YAIKQGQELETPIEKESG 230 Query: 224 SPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255 A A+ + + E N+ + + E Sbjct: 231 GKYAFAVKKGQNPELLNMFNEGLKELKRTGEYD 263 >gi|256845434|ref|ZP_05550892.1| amino acid-binding protein [Fusobacterium sp. 3_1_36A2] gi|256718993|gb|EEU32548.1| amino acid-binding protein [Fusobacterium sp. 3_1_36A2] Length = 250 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 84/256 (32%), Gaps = 28/256 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L L L F + L G N + + N GFD Sbjct: 1 MKKIITMLMLILSTLSFAA--------------KKLYVGTNAEFKPYEYL-ENNKMVGFD 45 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ L + + I++ ++ ALQ+K+ID + T RE ++ + Sbjct: 46 IELMELLGKELGYE---IKWQDMSFDGLLPALQTKKIDAVIAGMSATPEREKAVSFSIPY 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I + G I++ K L G ++ VQ G+ E D P ++ Sbjct: 103 IFFEGGHDVIVNDKSSFKKKEDLKGKTVGVQLGSIQEEFAKD------NGSIPKLYNNFT 156 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA-PAIIQGDTEWYN 239 E + + DA + T + I K P A A + D + Sbjct: 157 EALLDLQNQKIDAVIIAEVSGKEYLKTMKG---IKKIDTIKDKLPNASIAFRKADAKLAK 213 Query: 240 IVSWTHYAMVTAEELG 255 S T + + E Sbjct: 214 EFSNTILKIKNSPEYA 229 >gi|304395168|ref|ZP_07377052.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] gi|304357421|gb|EFM21784.1| extracellular solute-binding protein family 3 [Pantoea sp. aB] Length = 256 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 87/251 (34%), Gaps = 22/251 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++L + F L+ G++ F A+G +GFD Sbjct: 1 MKKSLSLALLFSLTAFTQGAWAQQ----------TLRFGVDPTFPPFESKAADGSLQGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + K Q++ + ALQ+K+ D + T R +AF Sbjct: 51 IDIGNAICAQA---KVKCQWVQMGFDSSIPALQAKKFDAILSAMSMTDKR--RQQVAFSD 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + Y + +++ L G +I V GT E +++ + + Sbjct: 106 MLYNTPSALLAPADSKLTTDVASLRGKTIGVAQGTIQETYAKTKWESQG--VKIVSYPNQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH----VILPDIISKSPLAPAIIQGDT 235 E+ A R D + + LT+ + ++ +I + A+ +GD Sbjct: 164 MEVYPDLVAGRLDGSLANAVSAEQGFLTSPEGKTYAIKGTLVDKVIFGDGVGIALRKGDE 223 Query: 236 EWYNIVSWTHY 246 +++ Sbjct: 224 ANLKMINTALT 234 >gi|90407530|ref|ZP_01215712.1| Arginine-binding periplasmic protein 1 precursor [Psychromonas sp. CNPT3] gi|90311340|gb|EAS39443.1| Arginine-binding periplasmic protein 1 precursor [Psychromonas sp. CNPT3] Length = 257 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 79/247 (31%), Gaps = 20/247 (8%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 F++ +I F ++ + ++ F + A G +GFD++ Sbjct: 3 RFYILFFAVIFSFSAFTQA-----EEVTHKQVVRFATEANYYPFEYLDAQGKMQGFDIEI 57 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 +A+ + D + L+L+ + D + D T R + F Y Sbjct: 58 AKAICEQMDFD---CSFQNQRFDSLLLSLKFGRFDAVIAALDITSER--LQDVDFSNSYY 112 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 F+ + L+G I VQA ++ + L + I + + Sbjct: 113 KVDPVFLRLADTE--DIFSLNGKFIAVQAASSNQDYLTKFKP---HDSFVIPYPTLINAF 167 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-----DIISKSPLAPAIIQGDTEWY 238 A + + DA GD + + ++++ S AI +G+ Sbjct: 168 NALKDAQIDAIFGDRAVILTFLNKVKNNQDYILSEMSGPLLASFSSGYGIAIKKGNKTLQ 227 Query: 239 NIVSWTH 245 ++ Sbjct: 228 QQLNTGL 234 >gi|13474096|ref|NP_105664.1| amino acid ABC transporter, periplasmic binding protein [Mesorhizobium loti MAFF303099] gi|14024848|dbj|BAB51450.1| amino acid ABC transporter, periplasmic binding protein [Mesorhizobium loti MAFF303099] Length = 269 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 85/259 (32%), Gaps = 13/259 (5%) Query: 3 KDFFVSILCLII--LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K +IL L L + + NA L DI K G + G+ F+ A+ KG+D Sbjct: 8 KSSIAAILVLGAAGLGIATQAANADALADITKAGTINVGVFADFPPFSSASADMSLKGYD 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + + + + + R L ++DIL +E + F Sbjct: 68 MDVAQYIADTLKVKLNPVA---VTGQNRIPYLNDHRVDIL---MSVGYSKEREQVIDFAA 121 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I + L+ SI V GT + +L + A F+ Sbjct: 122 AYAPYYIAVIGPAAMSVKGKEDLADKSIAVNRGTLEDTSLTEAAPA---SADIKRFDNYN 178 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A+ + + + D + S S + + + + Sbjct: 179 SVIQAFISGQTQLMVVGNDVGAQVLAKQDVLKPEQKFQLLTSPSHIG--LNKNEDGLKKA 236 Query: 241 VSWTHYAMVTAEELGITQK 259 V+ M+ +L + K Sbjct: 237 VNDAIAKMLADGKLDESSK 255 >gi|145224167|ref|YP_001134845.1| extracellular solute-binding protein [Mycobacterium gilvum PYR-GCK] gi|315444502|ref|YP_004077381.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] gi|145216653|gb|ABP46057.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium gilvum PYR-GCK] gi|315262805|gb|ADT99546.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] Length = 306 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 72/245 (29%), Gaps = 16/245 (6%) Query: 22 TNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 A+ + IK G L G+N G GFDVD A++ + P Y Sbjct: 54 AIANTVPESIKSTGTLVVGVNVPYAPNEFKDPEGKLVGFDVDLMNAIAGTLGLTPE---Y 110 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + ++Q D+ + + RE + F + G + I + Sbjct: 111 KEADFAKIIPSIQGGTFDVGMSSFTDSKEREE--QVDFV-TYFSAGTAWAQPAGGDI-NP 166 Query: 141 SQLSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 G + VQA T E I F+ + A + DA + Sbjct: 167 EDACGKKVAVQATTVQETDELPARSKKCVDEGKPAIEIIPFDSQDAATNAVVLGQADAMS 226 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D L + + +P + +G +++ ++ + Sbjct: 227 ADSP--VTLYAIKQTNGKLEQAGETFDSAPYGWPVEKGSPLAQSLL-QALQHLIDNGKYQ 283 Query: 256 ITQKN 260 N Sbjct: 284 EIAAN 288 >gi|319940653|ref|ZP_08014996.1| hypothetical protein HMPREF9464_00215 [Sutterella wadsworthensis 3_1_45B] gi|319806019|gb|EFW02777.1| hypothetical protein HMPREF9464_00215 [Sutterella wadsworthensis 3_1_45B] Length = 257 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 75/251 (29%), Gaps = 24/251 (9%) Query: 1 MYKDFFV-SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKG 58 M K+FFV + I S A + F + G+ +G Sbjct: 1 MTKNFFVRTAAAGIAALVLCGSAVADTW---------RVATEGTFPPFEFYNSTTGEIQG 51 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 F+VD R ++ + D ++ + A+ S ID + T R + F Sbjct: 52 FEVDLVREMAKVMKKD---LKLETMGFDAIIPAILSGTIDTGAAGFSITPERAK--RVLF 106 Query: 119 RPITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 Y G ++ K I S L G I VQ GTT+ F F Sbjct: 107 TIPFYKSGLTIVVPKGNPKNIQSFDDLKGKKISVQLGTTSMS-----FAKKIQDAQVTTF 161 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDT 235 + A DA D + N + + L I + A + +T Sbjct: 162 NGAGDALLNMIAGNADAVINDKPVTDYIMTQNKQIAESCLHLKPIATADLFAMVTSKQNT 221 Query: 236 EWYNIVSWTHY 246 + + Sbjct: 222 KLKAEMDKALK 232 >gi|323529009|ref|YP_004231161.1| family 3 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323386011|gb|ADX58101.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1001] Length = 255 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 82/250 (32%), Gaps = 19/250 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K + + +I + L+ GI+ +G KGFDVD Sbjct: 2 KLPLMMLSAALIFSNGVLAAETDT---------LRLGIDPSYPPMDSKAPDGSLKGFDVD 52 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + I ++ Q++ L ALQ+++ID + + T RE + F Sbjct: 53 LGNEICRRI---HARCQWVELEFSGMIPALQARKIDAILSSMAITQKRE--QQILFTSKL 107 Query: 123 YFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + I + ++ + L+G I VQ+GT E + H + ++ +E Sbjct: 108 FQFKSRLIARQGSPLAGGLQALAGKQIGVQSGTQFEGYALKNWAPLG--AHVVAYKSQDE 165 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + A + R D L + + +S I E V Sbjct: 166 VFADLQNGRLDGALLGSVEADFGFLRTPAGRGFAFVGEPLSMGDRGTGIGLRKDE--TAV 223 Query: 242 SWTHYAMVTA 251 + A + A Sbjct: 224 QASMNAAIAA 233 >gi|55821477|ref|YP_139919.1| glutamine ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55823406|ref|YP_141847.1| glutamine ABC transporter permease [Streptococcus thermophilus CNRZ1066] gi|55737462|gb|AAV61104.1| glutamine ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55739391|gb|AAV63032.1| glutamine ABC transporter permease protein [Streptococcus thermophilus CNRZ1066] gi|312278815|gb|ADQ63472.1| Glutamine ABC transporter permease protein [Streptococcus thermophilus ND03] Length = 736 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 62/210 (29%), Gaps = 15/210 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ F + ++ + +T F ++ +KG D Sbjct: 1 MKKKLLTLFLSVMSALFVFGAKASAS--------TISVVSDTAYAPFEFKDSDQTYKGID 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ D + A+QS Q D L T T R+ F Sbjct: 53 VDIINEVAKRKNWD---VNQTYPGFDAAVNAVQSGQADALMAGTTVTDARKKV--FTFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y +S QL G ++ V+ GT + L + F+ + Sbjct: 108 TYYDTSIVIYTRSNDKVSDYKQLKGKTVGVKNGTAAQTWLDKNASKYGF--TVKTFDTSD 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + + A D + Sbjct: 166 LMNNSLDSGSVYAAMDDTPVVQYAIGQGKD 195 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 7/174 (4%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 +++ F +G + G DVD A++ + ++ A+QS Q Sbjct: 283 TISMDSSFAPFEYQNGSGKYVGIDVDIINAIAK---NQGFNVKLTNPGFDASLNAVQSSQ 339 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 D + T R+ F Y + K I L G ++ + GT++ Sbjct: 340 ADAVLAGMTITDARK--QIFDFSDPYYTSNIRLAVKKGSNIKKYEDLKGKTVGAKNGTSS 397 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 L + + ++ + + + D+ D + L Sbjct: 398 YSWLEENADKYGF--TLRAYDEASTMYDSLNSGSIDSLMDDEAVLLYAIQQGRN 449 >gi|13473258|ref|NP_104825.1| glutamine-binding protein, glutamine ABC transporter [Mesorhizobium loti MAFF303099] gi|14024006|dbj|BAB50611.1| glutamine-binding protein, glutamine ABC transporter [Mesorhizobium loti MAFF303099] Length = 276 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 89/257 (34%), Gaps = 10/257 (3%) Query: 6 FVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 + +L + + + S+L + RG L G + + G+ G Sbjct: 1 MAGLATAGVLATVDAQKAAAQAASDSLLRTVLDRGKLIVGTGSTNAPWHFENDAGELVGM 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+ R L+ +FDDP+K++++ + +R + + ++DI + T R S + F Sbjct: 61 DITMGRILAKGLFDDPTKVEFVMQDPAQRIPNVTTNKVDITIQFMTMTAQR--SQLINFS 118 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +G + + +L + + + + + Sbjct: 119 RPYYVEGVALLTLPTAENKTFDKLLAGGSATRISILQNVDAESSVHYALPQAQVLQIDTQ 178 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A + R DA D+S + L P ++ A+ QGD +W Sbjct: 179 ANVLQALESKRADAAAVDLSTVRWLASR--NPDKYFDAGKSWYSMLYGAALRQGDLDWLT 236 Query: 240 IVSWTHYAMVTAEELGI 256 V+ T + E + Sbjct: 237 FVNQTFTIAMFGHESAL 253 >gi|324990984|gb|EGC22918.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK353] Length = 729 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 59/206 (28%), Gaps = 16/206 (7%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F +L L F + A +K +T F ++ +KG DVD Sbjct: 12 FLAVLLTLFPFFALGATAQADT---------VKIVSDTAYAPFEFKDSDQTYKGIDVDII 62 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ D I A+Q+ Q D + T RE Y Sbjct: 63 NKVAEIKGWD---IDMSFPGFDAAVNAVQAGQADAIMAGMTKTSEREKV--FTMSDTYYD 117 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 K IS QL G + V+ GT + L + F+ + + Sbjct: 118 TKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKNKDKYGF--TLKTFDTGDLMYN 175 Query: 185 AYRAHRCDAYTGDISALYALKLTNDR 210 + A DA D + Sbjct: 176 SLSAGDVDAVMDDQPVIEYAINQGQN 201 Score = 89.0 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 28/241 (11%), Positives = 70/241 (29%), Gaps = 14/241 (5%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 + ++ F + + G D++ +A++ ++ ++ Sbjct: 277 KDKYIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QGFTVEVTNPGFDAAINSV 333 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152 Q+ Q D + T R+ + + Y + I S +L G ++ V+ Sbjct: 334 QTGQADGIIAGMSVTDARKKT--FDYSDPYYTANSILAVKDSSNIKSYEELKGKTVGVKT 391 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT ++ L + + F + + A D + + Sbjct: 392 GTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVMDDEPVVKYAIKQGKK-- 447 Query: 213 EHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 L I +P A ++ + + +E G Q+ +++ Sbjct: 448 ----LKTPIEGTPSGQVAFAVKKGSNPELIEMFNNGLANLKESGKYQEILDKYLASEEKE 503 Query: 272 D 272 Sbjct: 504 S 504 >gi|310814818|ref|YP_003962782.1| extracellular solute-binding protein [Ketogulonicigenium vulgare Y25] gi|308753553|gb|ADO41482.1| extracellular solute-binding protein [Ketogulonicigenium vulgare Y25] Length = 263 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 86/245 (35%), Gaps = 14/245 (5%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + + + + + A L +I++RG ++ + G+ ++ + +N G Sbjct: 1 MKINRRIALLAMTAGMSLGLAMPAAAD-LAEIRERGVIRIAVAMGIPQYSYIDSNMQPAG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 DV+ R L+ + ++ + + R +Q+ + D++ T R + F Sbjct: 60 SDVETARMLAEDLG---VALELVEITNAARVPTIQTDKADLVVSALGITDER--RQAIDF 114 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 IS + L+G I + TT + + A+ + FE Sbjct: 115 SVPYATLALVVAAPADIDISDYADLTGKRIALTRATTNDQDIT----ANTTGAEILRFED 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + + + D + + + + + + I ++ L + +G+ E Sbjct: 171 DATLITSVISGQVDIISSQSAVIGGINERRRGGP--LEIKFIQRETNLGIGLAKGNPELL 228 Query: 239 NIVSW 243 V Sbjct: 229 AWVDE 233 >gi|271968291|ref|YP_003342487.1| serine/threonine protein kinase-like protein [Streptosporangium roseum DSM 43021] gi|270511466|gb|ACZ89744.1| Serine/threonine protein kinase-like protein [Streptosporangium roseum DSM 43021] Length = 600 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 83/225 (36%), Gaps = 10/225 (4%) Query: 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83 + +L IK G L+ G G G + GF+V+ ++ A+ K++++P+ Sbjct: 354 SPLLDRIKAGGVLRVGYRDGFPGVSLGVP---PTGFEVEVAEYIARALKVPEGKVRFVPV 410 Query: 84 NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143 +R A++ ++D++ N + +AF Y + ++ IS V L Sbjct: 411 GYADREAAVERGKVDLVIANLSI-DSADR-SRVAFAGPYYVAHRDVLVRAGMKISEVGHL 468 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 G +C+ AG +T ++D + + + R DA GD + Sbjct: 469 RGKKLCLAAGQSTGSMISDM----GVTFVAVHDNDTSRCANRVADGRADALPGDDVLIAG 524 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 P I ++ A+ GD ++ AM Sbjct: 525 FGARLRGPG-LKIAGIRLTTERYGVALRSGDPRACQAINGAIRAM 568 >gi|238751272|ref|ZP_04612766.1| Histidine-binding periplasmic protein of high-affinity histidine transport system [Yersinia rohdei ATCC 43380] gi|238710546|gb|EEQ02770.1| Histidine-binding periplasmic protein of high-affinity histidine transport system [Yersinia rohdei ATCC 43380] Length = 260 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 76/215 (35%), Gaps = 13/215 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 +K G + F A G+ GFD+D + L + I +K ++ + +L++K Sbjct: 28 IKIGTDPTYAPFESKNAKGELVGFDIDIAKELCNRI---DTKCTFVESDFDALIPSLKAK 84 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGT 154 +ID + + T R+ + F Y I K I ++ L G + V G+ Sbjct: 85 KIDAIISSLSITEKRQKEIA--FTDKLYAANARLIAPKDSKIEPTLVALKGKRVGVLQGS 142 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T E ++ + + ++ + I A + R DA D A L + ++ Sbjct: 143 TQEAFANAEWQPKGID--VVAYQNQDLIYADLASGRIDAAFQDEVAGSEGFLKQEVGKDY 200 Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244 + + + D E + Sbjct: 201 GFAGPSVKNDQFFGIGTGMGLRKDDAELKAALDKA 235 >gi|78061107|ref|YP_371015.1| extracellular solute-binding protein [Burkholderia sp. 383] gi|77968992|gb|ABB10371.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia sp. 383] Length = 257 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 92/252 (36%), Gaps = 18/252 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F + + L FT+ + +A ++ GI+ +G KGFD Sbjct: 1 MKRTFLPFVY--LCLAFTASAAHA------LDARPVRLGIDPTYPPMDSKAPDGSLKGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + Q++ L ALQ+++ID + + T RE + F Sbjct: 53 VDLGNEICRRA---QLRCQWVELEFSGMIPALQARKIDAILSSMAITEKREK--QILFSS 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + G+ S + L+G + VQ+GT E ++ + + ++ Sbjct: 108 KLFRFKSRLVARPGSGVDSTTASLAGKHVGVQSGTQFESWALAHWAPAGVS--VVPYKSQ 165 Query: 180 EEIDAAYRAHRCDA--YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 +++ A R DA + L++ + V P + + + Q DT Sbjct: 166 DDVFADLVNGRLDAALLGTVEADYGFLRMPKGKGFAFVGAPLDMGDRGVGIGMRQSDTAL 225 Query: 238 YNIVSWTHYAMV 249 + +M+ Sbjct: 226 KASIDGAIASML 237 >gi|17547231|ref|NP_520633.1| putative cyclohexadienyl dehydratase precursor signal peptide protein [Ralstonia solanacearum GMI1000] gi|17429533|emb|CAD16219.1| putative cyclohexadienyl dehydratase precursor signal peptide protein [Ralstonia solanacearum GMI1000] gi|299065893|emb|CBJ37072.1| Cyclohexadienyl dehydratase precursor [Includes: Prephenate dehydratase ; Arogenate dehydratase] [Ralstonia solanacearum CMR15] Length = 267 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 75/262 (28%), Gaps = 18/262 (6%) Query: 1 MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWK 57 M+ F ++L + + + + L +I RG L+ G F+ +G + Sbjct: 1 MFVRFIRSTALLLCACVAAPALAQATNRLDEILARGTLRVGSTGDYKPFSYKTPGDGRFI 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DVD L+ A+ + + DI TL R+ Sbjct: 61 GLDVDMGERLAKALGVKLEVVP---TTWSTLMRDFGEDRFDIAMSGISVTLERQK--KAF 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVS----QLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + DG+ I + + G V G T E ++ K Sbjct: 116 YSIPYQRDGKTPIARCENQDKFQTLEQIDRPGVRAVVNPGGTNEKFAREHLKQA----QI 171 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 V+ I A R D D L+ V S A + + Sbjct: 172 RVYPDNVTIFNEIIAGRADLMMTDAVETR-LQQKLHPELCAVHPDAPFDFSEKAYLLPR- 229 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 D + N V + + E Sbjct: 230 DVVFKNFVDQWLRQTMESGEFA 251 >gi|167850938|ref|ZP_02476446.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei B7210] gi|167899540|ref|ZP_02486941.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 7894] gi|167916216|ref|ZP_02503307.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei 112] gi|167924052|ref|ZP_02511143.1| bacterial extracellular solute-binding protein, family 3 [Burkholderia pseudomallei BCC215] Length = 240 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 74/219 (33%), Gaps = 6/219 (2%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS----SAIFDDPSKI 78 +A L I + V F + GF D A+ + +I Sbjct: 15 HARTLKKIADTNRMTVSYRESAVPFCYLLTPHKAVGFSADLTDAVVDDVRKKLKMPGLQI 74 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Y+P+ + R L + D+ +T T R ++F ++ G ++ K I Sbjct: 75 AYIPVTRQNRNPLLVNDTYDLEGGSTTNTAAR--GQDVSFSMNLFYAGTRVLVKKASRIR 132 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 + L+G ++ AG+T E + Y H++ + + + R D Sbjct: 133 GYADLAGKTVATAAGSTNENVIRKYAADHHLDIDVVPAKNYAAGPRMVESDRTAVLALDD 192 Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 L+ ++ P + D + P + +GD Sbjct: 193 VLLFGMRANAADPELLEVAGDALQVEPRGCMVRKGDPAS 231 >gi|325687630|gb|EGD29651.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK72] Length = 729 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 59/206 (28%), Gaps = 16/206 (7%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F +L L F + A +K +T F ++ +KG DVD Sbjct: 12 FLAILLTLFPFFALGATAQADT---------VKIVSDTAYAPFEFKDSDQTYKGIDVDII 62 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ D I A+Q+ Q D + T RE Y Sbjct: 63 NKVAEIKGWD---IDMSFPGFDAAVNAVQAGQADAIMAGMTKTSEREKV--FTMSDTYYD 117 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 K IS QL G + V+ GT + L + F+ + + Sbjct: 118 TKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKNKDKYGY--TLKTFDTGDLMYN 175 Query: 185 AYRAHRCDAYTGDISALYALKLTNDR 210 + A DA D + Sbjct: 176 SLSAGDVDAVMDDQPVIEYAINQGQN 201 Score = 89.4 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 28/258 (10%), Positives = 71/258 (27%), Gaps = 20/258 (7%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + + ++ F + + G D++ +A++ Sbjct: 266 STPAGQKASPTKDK------YIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QG 316 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 ++ ++Q+ Q D + T R+ + + Y + Sbjct: 317 FTVEVTNPGFDAAINSVQTGQADGIIAGMSVTDARKKT--FDYSDPYYTANSILAVKDSS 374 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S +L G ++ V+ GT ++ L + + F + + A Sbjct: 375 NIKSYEELKGKTVGVKTGTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVM 432 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + + L I +P A ++ + + +E Sbjct: 433 DDEPVVKYAIKQGKK------LKTPIEGTPSGQVAFAVKKGSNPELIEMFNNGLANLKES 486 Query: 255 GITQKNINQVSKDTTNPD 272 G Q+ +++ Sbjct: 487 GKYQEILDKYLASEEKES 504 >gi|218682498|ref|ZP_03530099.1| extracellular solute-binding protein family 3 [Rhizobium etli CIAT 894] Length = 257 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 67/231 (29%), Gaps = 14/231 (6%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 L IK G K G F +G GFDV+ A+++ + ++ Sbjct: 23 AGENLAAIKSTGVFKIGTEGTYAPFTYHDESGKLVGFDVEIGEAIAAKLGVKAE---FVE 79 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVS 141 L +K+ D + T R+ F I+ I + + Sbjct: 80 GKWDGLIAGLDAKRYDTVINQVGITEARK--QKYDFSEPYIASKAVLIVRDGDDSIKTFA 137 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G Q+ T+ LA A + + ++ R DA D + Sbjct: 138 DLKGKKSA-QSLTSNFGKLATEAGA-----ELVGTDGFDQSIQLVLTKRADATINDSLSF 191 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 K + + I + + E ++ A + A+ Sbjct: 192 LDFKKHKPDAPVKIAAQQ-ENADYSGVIIRKNEPELLAEINKAL-ADIKAD 240 >gi|209551406|ref|YP_002283323.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537162|gb|ACI57097.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 257 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 68/231 (29%), Gaps = 14/231 (6%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 L IK G K G F +G GFDV+ A+++ + ++ Sbjct: 23 AGENLAAIKSAGVFKIGTEGTYAPFTYHDESGKLVGFDVEIGEAIAAKLGVKAE---FVE 79 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVS 141 L +K+ D + T R+ F I+ I + + Sbjct: 80 GKWDGLIAGLDAKRYDTVINQVGITEARK--QKYDFSEPYIASKAVLIVRDGDDSIKTFA 137 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G Q+ T+ +A A + + ++ R DA D + Sbjct: 138 DLKGKKSA-QSLTSNFGKIATEAGA-----ELVGTDGFDQSIQLVLTKRADATINDSLSF 191 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 K I + + I + + E ++ A + A+ Sbjct: 192 LDFKKHKPDAPV-KIAAEQENADYSGVIIRKNEPELLAEINKAL-ADIKAD 240 >gi|254302964|ref|ZP_04970322.1| amino acid ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323156|gb|EDK88406.1| amino acid ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 250 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 82/256 (32%), Gaps = 28/256 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L L L F L G N + + N GFD Sbjct: 1 MKKIITILMLILSTLSFA--------------TKKLYVGTNAEFKPYEYL-ENNKMVGFD 45 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ L + + I++ ++ ALQ K+ID + T RE ++ + Sbjct: 46 IELMELLGKELGYE---IKWQDMSFDGLLPALQMKKIDAVIAGMSATPEREKAVSFSIPY 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I + G I++ K L G +I VQ G+ E D P ++ Sbjct: 103 IFFEGGHSVIVNNKSTFKKKEDLKGKTIGVQLGSIQEQFAKD------NGSVPKLYNNFT 156 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA-PAIIQGDTEWYN 239 E + + DA + T + I K P A A + D++ Sbjct: 157 EALLDLQNQKIDAVIIAEVSANEYLKTMKG---IKKIDTIKDKLPNASIAFRKVDSKLAK 213 Query: 240 IVSWTHYAMVTAEELG 255 S + + E Sbjct: 214 EFSDAILKLKNSPEYA 229 >gi|116512613|ref|YP_811520.1| amino acid ABC transporter permease/periplasmic protein [Lactococcus lactis subsp. cremoris SK11] gi|116108267|gb|ABJ73407.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Lactococcus lactis subsp. cremoris SK11] Length = 714 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 34/236 (14%), Positives = 72/236 (30%), Gaps = 15/236 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K FF L + + + +K +K ++ F W G D Sbjct: 1 MKKLFFALALMFATVTAFLVAPS------VKAETTVKIASDSSYAPFEFQNGQKKWVGID 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + K++ L++ Q+D + T R+ F Sbjct: 55 VDIMQEVAK---INDWKLEMSYPGFDAALQNLKAGQVDGVIAGMTITDERK--DTFDFSN 109 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K ++ S+L G ++ + GT + L + K + + + Sbjct: 110 PYYTSALTIATTKDSKLTDYSELKGKAVGAKNGTAAQTWLQENQKKYGY--NIKTYSDGV 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + A + ++ + P I A+++G + Sbjct: 168 HMFATLSSGNIVGAMDEVPVI--SYAMKQGQDLATNFPSISLSGGYGFAVMKGKNQ 221 Score = 94.0 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 66/221 (29%), Gaps = 11/221 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 K+ + F N + G DVD A++ + K+++ + + + Sbjct: 258 KKDVYTIASDNSFAPFEFQNDNKQFTGIDVDLLNAIAK---NQGFKLKWNFIGFQAAVDS 314 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150 +QS D + T R+ + Y I S L G ++ Sbjct: 315 VQSGHADGMMSGMSITDARK--QVFDYGNPYYSSNLTIATSSTDDSIKSWKDLKGKTLGA 372 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + GT + L D+ K + F + ++ +A D + K + Sbjct: 373 KNGTASFDYLNDHAKEYGY--TVKTFTDATTMYSSLNNGSINALMDDEPVI---KYAIKQ 427 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 + I A+ +G + A + A Sbjct: 428 GQKFTTPIKPIPDGQYGFAVKKGSNPELIEMFNNGLANLRA 468 >gi|329940764|ref|ZP_08290044.1| solute-binding protein [Streptomyces griseoaurantiacus M045] gi|329300058|gb|EGG43956.1| solute-binding protein [Streptomyces griseoaurantiacus M045] Length = 288 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 78/217 (35%), Gaps = 14/217 (6%) Query: 32 KRGFLKCGINTGLVGF-AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K G + + F +E+ G +GFDV ++ + + + P + Sbjct: 47 KAGQITTCTHLPYPPFQSEID--GKVQGFDVSLVDLVADDLGVKQAIVD-TPFENFKTGA 103 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASI 148 L S Q D+ + T R+ + F + Q +++KK G++S++ + G + Sbjct: 104 FLNSGQCDLAAAGMTITEERKK--NVDFSDPYFEATQAVLVNKKSGLTSLADVKSKGKKL 161 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 QA TT E A + P+ FE + + R + A D + Sbjct: 162 GAQAQTTGEDY------ARKQGFDPVSFESSDAVLNGLRTGQVQAVVIDYPVVQGWLKNK 215 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + +I + + +G+T+ V+ Sbjct: 216 ANADAFEVADNINTGEQYGFTVKKGNTKLLAAVNKAL 252 >gi|301067875|ref|YP_003789898.1| amino acid ABC transporter/signal transduction system periplasmic protein [Lactobacillus casei str. Zhang] gi|300440283|gb|ADK20049.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus casei str. Zhang] Length = 474 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 90/292 (30%), Gaps = 27/292 (9%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 L L ++ + ST A G + F N + G D+D +A+ Sbjct: 1 MALMLAVVLGSPVSTQA-------AEKTYVIGTDVTYAPFEFADKNNQYVGIDIDLMQAI 53 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + A + K+ PL AL++ QID + T R A Y Sbjct: 54 AKA---EGFKVDIKPLGFNAAVQALEANQIDGVIAGMQITPER--QQKFAMSDPYYKTAV 108 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + + + S+ L G + ++ GT + + F+ + Sbjct: 109 AMAVGQNSEVKSLKDLRGKRVALKTGTAAADYALSL--KAKYGFTTVTFDDSNNMYQDVI 166 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE---------WY 238 A D L T + + S A + ++ Sbjct: 167 TGNSVACFDDKPVLQYAIAT---GLKLKLAGPESKASYYGFATQKDRSDHLDQRFNAGLK 223 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALG 290 + + YA + A+ LG + + + T + FLG+ + N G +G Sbjct: 224 KVKADGTYAKIVAKYLGNGTQAAQKQTSAKTQDSDRSFLGLLRE-NWGTLMG 274 >gi|157691134|ref|YP_001485596.1| L-cystine ABC transporter substrate-binding protein [Bacillus pumilus SAFR-032] gi|194015794|ref|ZP_03054409.1| L-cystine-binding protein TcyA [Bacillus pumilus ATCC 7061] gi|157679892|gb|ABV61036.1| L-cystine ABC superfamily ATP binding cassette transporter, binding protein YckK [Bacillus pumilus SAFR-032] gi|194012149|gb|EDW21716.1| L-cystine-binding protein TcyA [Bacillus pumilus ATCC 7061] Length = 271 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 76/264 (28%), Gaps = 29/264 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS--------------ILGDIKKRGFLKCGINTGLVG 46 M K FF +L + T+ + AS + I+ +G L G Sbjct: 1 MKKMFFAIMLGACVALITACGSGASDNANKQSGSKESGDLWKSIQDKGVLTIGTEGTYAP 60 Query: 47 FAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 F G+DV+ ++ + P + F L SK+ D+++ Sbjct: 61 FTFHDKKTDKLTGYDVEVITEVAKRLDLKPE---FKETQWDSMFAGLNSKRFDVVANQVG 117 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYF 164 T F + I +S + G Q+ T+ LA Sbjct: 118 KTG---RENQYEFSDKYTTSQAIVVTKSDNNDIKKLSDVKGKK-AAQSLTSNYNKLATDA 173 Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 A E + + + R D D A+ T+ + V + Sbjct: 174 GAK-----IEGVEGLAQSIQLIQQGRADLTFNDKLAVLNYLKTSGNKNLKVAFETGDPQE 228 Query: 225 PLAPAIIQGDTEWYNIVSWTHYAM 248 A +G E + V+ M Sbjct: 229 TY-FAFRKGSGEVVDKVNGALKEM 251 >gi|111223729|ref|YP_714523.1| putative transporter substrate-binding protein [Frankia alni ACN14a] gi|111151261|emb|CAJ62973.1| Putative transporter substrate-binding protein (partial) [Frankia alni ACN14a] Length = 272 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 87/239 (36%), Gaps = 22/239 (9%) Query: 24 ASILGDIKK-RGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPS---KI 78 S + I + RG+L+ GI T + +GFDV RA+++AIF I Sbjct: 4 GSRMRAIAQVRGYLRVGIVTDAPPAGLMNWRTLRLEGFDVGIARAVAAAIFGPDDVDDHI 63 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138 Q+ + ER L+S +D+L T R+ + F + Y ++ ++ G + Sbjct: 64 QFRAVTTSEREDLLRSNMVDMLVATMTITCERKRQVR--FSSVYYESTLRLLVRQEAGFT 121 Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198 ++ L+G +C AG+T LA + R+ + A + DA GD Sbjct: 122 GIADLAGRPVCTSAGSTASEKLARLPTPA---PRVVTRSRIADCLVALQHGDVDAIVGDD 178 Query: 199 SALYALKLTN-------DRPSEHVILPDIISKSPLAPAII-----QGDTEWYNIVSWTH 245 L L + + P A+ GD + V+ Sbjct: 179 VLLAGLAAQDPYTTVLGPQAFGAAFAAGGRLDEPYGIAMPITGDTAGDDGFVAFVNGVL 237 >gi|69248956|ref|ZP_00604829.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Enterococcus faecium DO] gi|258615978|ref|ZP_05713748.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium DO] gi|293557298|ref|ZP_06675844.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1039] gi|293560170|ref|ZP_06676672.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1162] gi|294616498|ref|ZP_06696279.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1636] gi|294621567|ref|ZP_06700733.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium U0317] gi|68194329|gb|EAN08842.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Enterococcus faecium DO] gi|291590646|gb|EFF22374.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1636] gi|291598872|gb|EFF29923.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium U0317] gi|291600550|gb|EFF30856.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1039] gi|291605842|gb|EFF35274.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1162] Length = 500 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 90/273 (32%), Gaps = 28/273 (10%) Query: 1 MYKD-----FFVSILCLIILFF----------TSFSTNASILGDIK-KRGFLKCGINTGL 44 M + F + L+ L F T+ S+ + + I+ K+ ++ Sbjct: 1 MKRKHLFHSFVFLMTGLVTLAFGHVAQADNTTTAESSTSETMQKIEPKKDVYVIASDSAF 60 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F A G+++G DV ++ I+ AL+S Q D + Sbjct: 61 APFEFQNAKGEYEGIDVKLMENIAK---LQGFNIRMDYRGFSAALQALESGQADGMIAGM 117 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADY 163 T R+ F + G + K I S L G ++ + GT + L+D+ Sbjct: 118 TVTDERKK--SYDFSDSYFDSGIQLAVKKGDTSIKSYEDLKGKTVGAKVGTESAEFLSDH 175 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 + F+ +++ + DA D + + + E I + K Sbjct: 176 ESEYGYS--IKYFDAADQLYDGLKVGAIDAMMDDYPVI-GYAIKQGQELETPIKKESGGK 232 Query: 224 SPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255 A A+ + + E N+ + + E Sbjct: 233 --YAFAVKKGQNPELLNMFNEGLKELKRTGEYD 263 >gi|307129534|ref|YP_003881550.1| histidine-binding periplasmic protein [Dickeya dadantii 3937] gi|306527063|gb|ADM96993.1| Histidine-binding periplasmic protein precursor [Dickeya dadantii 3937] Length = 279 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 97/261 (37%), Gaps = 25/261 (9%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M++ + I+ + + F+ K+ ++ G++ F E G+ GF Sbjct: 20 MFRKLSLLKIIVIFTISPIVFA----------KQDVIRIGVDLTFPPFQERDKYGNPSGF 69 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D A+ ++ +K Y+ + AL +K+ID++ T R+ + F Sbjct: 70 DIDITDAICKSV---NAKCDYIVNTFDAQIPALLAKKIDVI-SPLGVTKKRKE--SIDFS 123 Query: 120 PITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + F+ K+ + L G +I VQ GT E ++ + I + Sbjct: 124 DYLFHIPTRFVARKETNLLPQVDILRGKNIAVQQGTIQEAYANKHWLPEG--VNVISYPD 181 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQG 233 E I A R D A+ L + + I+ + L A I +G Sbjct: 182 QEAIYEDLYAGRVDGALSPSVAMTFGFLQTPEGKDFELKGPEITDADLFSIGSAYGIRKG 241 Query: 234 DTEWYNIVSWTHYAMVTAEEL 254 DTE +++ ++ + E Sbjct: 242 DTETKQMLNQGLKNIMNSGEF 262 >gi|308184723|ref|YP_003928856.1| amino acid ABC transporter [Helicobacter pylori SJM180] gi|308060643|gb|ADO02539.1| amino acid ABC transporter [Helicobacter pylori SJM180] Length = 258 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 31/251 (12%), Positives = 74/251 (29%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ +L + FF F + + + + + G F G G+D Sbjct: 1 MKKVLFLFLLVIG--FFWGFLNASGLYEKLVNKETISVGTEGIYPPFTYHDKEGKLTGYD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R L+ + I++ + L+S + D+++ T ++ Sbjct: 59 VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQAAFDKSL 114 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G ++ K I + + G +T A + + + Sbjct: 115 PYSYSGTIMLVRKDENRIKDIKDIKGLKAANTLSSTYGEI------AFKYDAQIVSVDSM 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R D A+ T+ + + I + + Sbjct: 169 AQALLLVVQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALE 228 Query: 240 IVSWTHYAMVT 250 +++ ++ Sbjct: 229 LINQAMQRLIN 239 >gi|227542733|ref|ZP_03972782.1| glutamate-binding protein GluB [Corynebacterium glucuronolyticum ATCC 51866] gi|227181499|gb|EEI62471.1| glutamate-binding protein GluB [Corynebacterium glucuronolyticum ATCC 51866] Length = 288 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 82/289 (28%), Gaps = 19/289 (6%) Query: 1 MYKDFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F I L + ST L G + G G + G Sbjct: 1 MMRRIFAIISALAVAVTATACGSTEPRSLVRSVDSGHVILGTKYDQPGLGMRNPDKTMTG 60 Query: 59 FDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 DV+ ++ +I + + R +++ ++D+++ R Sbjct: 61 LDVEVATYVVNHIADQRGVAHPEITWRETPSATRETVIKNGEVDMIAGTYSINASRAK-- 118 Query: 115 GLAFRPITYFDGQGFIMHKKKG-ISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYH 172 + F Q ++ + S+ L G +C G+T + Sbjct: 119 SVNFGGPYLLTHQALLVRSDDHTLQSLQDLDKGRKLCSVTGSTPAQKVKKSLP----GVQ 174 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL----PDIISKSPLAP 228 ++ A + DA T D + LY L E + + + Sbjct: 175 LQEYDSYSSCVEALHQKKVDAMTTDATILYGFALQYPGEFEVIEMTKEDGKPFTNEHYGL 234 Query: 229 AIIQGDTEWYNIVSWTHYAMV-TAEELGITQKNINQVSKDTTNPDVQRF 276 + + D E ++ AM + KN+ + + + Sbjct: 235 GLAKDDAESTEAINDAVRAMQDDGSFQAMVDKNLGENASVVEADEAGNL 283 >gi|325694667|gb|EGD36574.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK150] Length = 729 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 59/206 (28%), Gaps = 16/206 (7%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F +L L F + A +K +T F ++ +KG DVD Sbjct: 12 FLAVLLTLFPFFALGATAQADT---------VKIVSDTAYAPFEFKDSDQSYKGIDVDII 62 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ D I A+Q+ Q D + T RE Y Sbjct: 63 NKVAEIKGWD---IDMSFPGFDAAVNAVQAGQADAIMAGMTKTSEREKV--FTMSDTYYD 117 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 K IS QL G + V+ GT + L + F+ + + Sbjct: 118 TKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKNKDKYGY--TLKTFDTGDLMYN 175 Query: 185 AYRAHRCDAYTGDISALYALKLTNDR 210 + A DA D + Sbjct: 176 SLSAGDVDAVMDDQPVIEYAINQGQN 201 Score = 89.4 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 28/258 (10%), Positives = 71/258 (27%), Gaps = 20/258 (7%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + + ++ F + + G D++ +A++ Sbjct: 266 STPAGQKASPTKDK------YIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QG 316 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 ++ ++Q+ Q D + T R+ + + Y + Sbjct: 317 FTVEVTNPGFDAAINSVQTGQADGIIAGMSVTDARKKT--FDYSDPYYTANSILAVKDSS 374 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I S +L G ++ V+ GT ++ L + + F + + A Sbjct: 375 NIKSYEELKGKTVGVKTGTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVM 432 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEEL 254 D + + L I +P A ++ + + +E Sbjct: 433 DDEPVVKYAIKQGKK------LKTPIEGTPSGQVAFAVKKGSNPELIEMFNNGLANLKES 486 Query: 255 GITQKNINQVSKDTTNPD 272 G Q+ +++ Sbjct: 487 GKYQEILDKYLASEEKES 504 >gi|46578524|ref|YP_009332.1| glutamine ABC transporter periplasmic glutamine-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120603893|ref|YP_968293.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4] gi|46447935|gb|AAS94591.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120564122|gb|ABM29866.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio vulgaris DP4] gi|311232451|gb|ADP85305.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris RCH1] Length = 249 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 75/216 (34%), Gaps = 12/216 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 L +T F +G + GFD++ +A++ D + P++ Sbjct: 22 SAKQLVVAHDTNFKPFEFKGEDGKYTGFDIELWQAIAKIAGVDY---KLQPMDFNGIIPG 78 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICV 150 LQ+ +D+ R + F Y G ++ + GI +V L+G + V Sbjct: 79 LQTGNVDVGIAGITIKPERAAV--VDFSDPYYDSGLMILVRENETGIKAVEDLAGKIVAV 136 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + T++ D+ K+ +F + + A DA D+ + +T + Sbjct: 137 KTATSSV----DFMKSFGKAKELKLFPNNDSMFFELMAGGADAVIFDMPVVKEFAMTAGK 192 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 V+ P + +G +E V+ Sbjct: 193 GKVKVVGP-LYQGQSYGIGFPKG-SELVGKVNDALK 226 >gi|302536846|ref|ZP_07289188.1| glutamine-binding periplasmic protein [Streptomyces sp. C] gi|302445741|gb|EFL17557.1| glutamine-binding periplasmic protein [Streptomyces sp. C] Length = 353 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 76/234 (32%), Gaps = 17/234 (7%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I+ G +K G +T V G G D D AL + Q+ Sbjct: 97 KKIQDAGVIKVGSDTAYAPMEFVDG-GKIVGVDPDIAEALGKQLGVK---FQFTSGTFDG 152 Query: 88 RFLALQSKQIDILSRNTDWTLLREI---------SLGLAFRPITYFDGQGFIMHK--KKG 136 +L++ + DI + R+ G+ F + G ++ K + Sbjct: 153 LITSLETGRQDIAMSSITDNKKRQEGLDDKGQKIGKGVDFVD-YFSSGVSLLVKKGNPQN 211 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFERVEEIDAAYRAHRCDAYT 195 I S+ L G ++ VQ GTT E T + K F+ E +A A Sbjct: 212 IKSLDDLCGKTVAVQRGTTYEDTFKAQAEKCGDKKLTIEAFDTDAEAQTRVKAGGAVADL 271 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 D T+ ++ + A+ + +T+ + + A++ Sbjct: 272 NDFPVTAYTAKTSGGGNDFEVGGAQADVGLFGIAVSKENTQLRDALKEALDAII 325 >gi|295704149|ref|YP_003597224.1| sulfur-containing amino acid ABC transporter sulfur-containing amino acid-binding protein TcyK [Bacillus megaterium DSM 319] gi|294801808|gb|ADF38874.1| sulfur-containing amino acid ABC transporter, sulfur-containing amino acid-binding protein TcyK [Bacillus megaterium DSM 319] Length = 273 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 87/257 (33%), Gaps = 14/257 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS------TNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K +I ++L + + ++K + G T + G Sbjct: 1 MKKLQLTAIFLSLLLLLAACGTPNKETAANASKDKVQK---IIVGTGTQFPNICFLDDKG 57 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + G+DV+ + + + K ++ ++ L+L+S +ID+++ + R+ Sbjct: 58 NLTGYDVELVKEIDKRL--PNYKFEFKTMDFSNLLLSLESNKIDLVAHQMEVNEERKQKF 115 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 P F + K I S+ LSG + V A + + + Y K H + + + Sbjct: 116 LFNKEPYNIFPLHVVVNEKNTSIKSIKDLSGKKVIVGATSNSANLIDKYNKEHGNRINIV 175 Query: 175 VFER-VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + ++ + R DA T + V+ P I + + + Sbjct: 176 YSGQGSDDTKTQLKTGRADA-TISTPFAVDFVNKQADAEQKVVGPAISNSKVY-FMLRKN 233 Query: 234 DTEWYNIVSWTHYAMVT 250 +T V + Sbjct: 234 ETGLQKDVDKALKEIKE 250 >gi|310767116|gb|ADP12066.1| glutamine ABC transporter periplasmic protein [Erwinia sp. Ejp617] Length = 248 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 75/216 (34%), Gaps = 12/216 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 L +T V F + G++ GFD+D A++ + + P++ A Sbjct: 23 AEKKLVVATDTAFVPFEFKQG-GNYVGFDIDLWDAIAKQLNMEY---TLKPMDFSGIIPA 78 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICV 150 LQ++ ID+ T R+ +AF Y G ++ + + L+G + V Sbjct: 79 LQTRNIDLALAGITITDERKK--AIAFSDGYYKSGLLVMVKANNDSVKGIDDLNGKVVAV 136 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++GT + + K F ++ +R DA D + T + Sbjct: 137 KSGTGSVDYAKQHIKYK----DLRQFPNIDNAYMELGTNRADAVLHDTPNILYFINTAGK 192 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + D I A +G + V+ Sbjct: 193 G-QFKAVGDSIEAQQYGIAFPKGSDDLREKVNGALK 227 >gi|297380138|gb|ADI35025.1| amino acid ABC transporter, periplasmic binding protein [Helicobacter pylori v225d] Length = 258 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 31/250 (12%), Positives = 74/250 (29%), Gaps = 13/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ +L + FF F + + + + + G F G G+D Sbjct: 1 MKKVLFLFLLAIS--FFGGFLNASGLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R L+ + I++ + L+S + D+++ T ++ Sbjct: 59 VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQATFDKSL 114 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G ++ K I + + G +T A + + + Sbjct: 115 PYSYSGTIMLVRKDENRIKDIKDIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSM 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R D A+ T+ + + I + + Sbjct: 169 AQALLLVAQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKRQEKALE 228 Query: 240 IVSWTHYAMV 249 +++ ++ Sbjct: 229 LINQAMQRLI 238 >gi|120603330|ref|YP_967730.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4] gi|120563559|gb|ABM29303.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio vulgaris DP4] Length = 261 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 77/224 (34%), Gaps = 11/224 (4%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 S++ KRG L+ G +T V +A +G + GF+VD L+ + ++ + Sbjct: 18 AEDSVIEQALKRGTLRVGFST-FVPWAMQDKSGAFVGFEVDVATRLAQDLG---LNLELV 73 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG--ISS 139 P AL + + D++ +R SL + F + + K + S Sbjct: 74 PTKWSGIIPALLTGKFDVIIGGMSVKPVR--SLKVNFTIPYDYASISVMASKSAAAGLKS 131 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 + + V A T + LA K K F+ + R A Sbjct: 132 LDDFDNPEVVVVARTGSTAALA--AKKRFPKARLRYFDDEGPAIQEVLSGRAHALVSSDP 189 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 L N ++ P+A A+ + D + N++ Sbjct: 190 LPRFEVLANPD-RLFTPEGKPLALEPVAFAVRKSDPDTLNVLDN 232 >gi|257878298|ref|ZP_05657951.1| extracellular solute-binding protein [Enterococcus faecium 1,230,933] gi|257880920|ref|ZP_05660573.1| extracellular solute-binding protein [Enterococcus faecium 1,231,502] gi|257892558|ref|ZP_05672211.1| extracellular solute-binding protein [Enterococcus faecium 1,231,408] gi|260559849|ref|ZP_05832028.1| extracellular solute-binding protein family 3 [Enterococcus faecium C68] gi|314938647|ref|ZP_07845927.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133a04] gi|314944091|ref|ZP_07850754.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133C] gi|314950329|ref|ZP_07853610.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0082] gi|314951101|ref|ZP_07854163.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133A] gi|314992313|ref|ZP_07857747.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133B] gi|314996122|ref|ZP_07861193.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133a01] gi|257812526|gb|EEV41284.1| extracellular solute-binding protein [Enterococcus faecium 1,230,933] gi|257816578|gb|EEV43906.1| extracellular solute-binding protein [Enterococcus faecium 1,231,502] gi|257828937|gb|EEV55544.1| extracellular solute-binding protein [Enterococcus faecium 1,231,408] gi|260074073|gb|EEW62396.1| extracellular solute-binding protein family 3 [Enterococcus faecium C68] gi|313589679|gb|EFR68524.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133a01] gi|313593129|gb|EFR71974.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133B] gi|313596735|gb|EFR75580.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133A] gi|313597318|gb|EFR76163.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133C] gi|313642035|gb|EFS06615.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0133a04] gi|313643346|gb|EFS07926.1| bacterial extracellular solute-binding protein, family 3 [Enterococcus faecium TX0082] Length = 288 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 33/250 (13%), Positives = 73/250 (29%), Gaps = 11/250 (4%) Query: 5 FFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 F I + + A+ +++K+ L + L + + G+D Sbjct: 16 LFALITSAFFILSACGTAAANQEDNSWSNVEKKKELVVATSGTLFPASYYNDQNELVGYD 75 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + KI + N + ++ ++ D + + T RE L+ Sbjct: 76 VDLAKEVAKRL---NVKISFKEYNVDGQITSVSKRESDFAANDFGITKEREKKFSLSETF 132 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 FD GI S+ L G + T+ + H K + Sbjct: 133 KYSFDSMIVRKKDDSGIHSLEDLKGKKAAGEPNTSYMRL----AEKHGAKLVTYDNATND 188 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + R D D ++ +++ + +G+ Sbjct: 189 QYLSDVANGRTDVILNDYYLQKMAVSALPDIPVKILENVYFNENESGFLLKEGNDALKKK 248 Query: 241 VSWTHYAMVT 250 + M Sbjct: 249 IDGVLKEMKE 258 >gi|89098933|ref|ZP_01171813.1| amino acid ABC transporter substrate-binding protein [Bacillus sp. NRRL B-14911] gi|89086337|gb|EAR65458.1| amino acid ABC transporter substrate-binding protein [Bacillus sp. NRRL B-14911] Length = 260 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 31/248 (12%), Positives = 79/248 (31%), Gaps = 19/248 (7%) Query: 1 MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K ++ + ++ + + G + F+ +A+G Sbjct: 1 MKKWIIAVVILCCAAVLGACGKKEASSGGME-LADEGKFTYAASGEFKPFSVTEADGTMT 59 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GFD++ A++ + +P + ++ ++S + D + + + Sbjct: 60 GFDIEVGEAVAKELGLEPVQKKFK---FGGIVEGVKSGRFDAAVASHTINE--DRLKAVN 114 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y+ G + S+ L I V G+T + + + + I ++ Sbjct: 115 FSIPYYYSGPQIFVRPDSSAKSLDDLKDLEIAVSKGSTYADSAEE------VTDNIIFYD 168 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A + DA D + +++ +S A A+ + + E Sbjct: 169 SDVTALEALSRGKHDAVITDFITGKEAI----GSGMEIEGKELLGRSEQAIAVAKDNEEL 224 Query: 238 YNIVSWTH 245 + ++ Sbjct: 225 LDQINEAL 232 >gi|326334175|ref|ZP_08200398.1| bacterial extracellular solute-binding protein, family 3 [Nocardioidaceae bacterium Broad-1] gi|325947966|gb|EGD40083.1| bacterial extracellular solute-binding protein, family 3 [Nocardioidaceae bacterium Broad-1] Length = 270 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 92/266 (34%), Gaps = 19/266 (7%) Query: 1 MYKDFFVSILCLIILFFTSFST-----NASILGDIKKR--GFLKCGINTGLVGFAEVKAN 53 M + FV L IL FS S G L+ G+++ A K + Sbjct: 1 MNQTKFVVAGALAILGAIVFSGRLSDPAPSASDKASATVGGTLRIGVDSAEP--AYYKVD 58 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G KGFD R+++ + + ++ ++ E AL++ +ID++ T E Sbjct: 59 GVAKGFDYQMARSVAEGMGAEAE---FVEMDFNELHPALRAGKIDMIGAQVTKTEEGER- 114 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F + F+ K I S + G +I V GT E L + ++ + Sbjct: 115 -EFDFSAPYFVTYVSFLAPKGSTIRSREDVDGKNIAVVEGTVHERYLREQYE----DVNI 169 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + + R DA+ ++ + P I+ P+ + +G Sbjct: 170 VKTPDAVAAVTSMRRGEADAFFYGAPYSASIIEDSPIPLTEPIVYQAQDA-PIGFVVREG 228 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQK 259 D I +++ E L I Sbjct: 229 DERKQQIDGVIEDMVLSGEWLKIKTD 254 >gi|308187189|ref|YP_003931320.1| glutamine-binding periplasmic protein precursor [Pantoea vagans C9-1] gi|308057699|gb|ADO09871.1| Glutamine-binding periplasmic protein precursor [Pantoea vagans C9-1] Length = 250 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 79/248 (31%), Gaps = 25/248 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K +L F + + + L G++T V F + + + GFD+D Sbjct: 7 KLKVSLVLVACSASFIATAQD-----------KLMVGVDTAFVPFEFKQGD-KYVGFDID 54 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + + P++ LQS+ +D+ T R+ + F Sbjct: 55 LWNAIAKKM---NVSYELRPMDFGGLIPGLQSRNLDVAMAGITITDARK--QVVDFSDGY 109 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y + I S L+G + ++ GT A F K + F ++ Sbjct: 110 YNADLLMAVKSSDTAIKKFSDLAGKKVGLKQGT-----AAASFMKSKYKADYVEFPNIDN 164 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGDTEWYNI 240 +A DA D + T D I A+ + ++ Sbjct: 165 AYLDLQAGNLDAVVHDSPNVLYYVKTAGNGKVKSTGETDSILPQQYGFAMQK-NSSLTPK 223 Query: 241 VSWTHYAM 248 V+ A+ Sbjct: 224 VNAALQAL 231 >gi|271499291|ref|YP_003332316.1| family 3 extracellular solute-binding protein [Dickeya dadantii Ech586] gi|270342846|gb|ACZ75611.1| extracellular solute-binding protein family 3 [Dickeya dadantii Ech586] Length = 260 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 94/256 (36%), Gaps = 23/256 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+K F+ +I+ + ++G ++ G++ F NG+ GF+ Sbjct: 1 MFKKLFIVPAIIILATSSVVFA---------RQGVIRIGVDLAYSPFQTRDVNGNPAGFE 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ ++ +K Y+ + AL +++ID++ T R+ + F Sbjct: 52 IDITDAICKSV---NAKCDYIVNTFDAQIPALLARKIDVI-SPLAVTPKRKE--AIDFSH 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + F+ K + L G +I VQ GT E Y+ + + Sbjct: 106 YLFHVPTRFVARKGSSLLPQVDKLRGKNIAVQQGTIQETYANKYWLPAG--VNVKSYPDQ 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 + I RA R D +L L + + + I+ L A I +GD Sbjct: 164 DAIYEDLRAGRVDGALCPSVSLIFSFLQTPQGKDFELKGPEITDDGLFSIGSAYGIRKGD 223 Query: 235 TEWYNIVSWTHYAMVT 250 TE +++ ++ Sbjct: 224 TETQQLLNQGLQNIIN 239 >gi|238797420|ref|ZP_04640919.1| Histidine-binding periplasmic protein of high-affinity histidine transport system [Yersinia mollaretii ATCC 43969] gi|238718691|gb|EEQ10508.1| Histidine-binding periplasmic protein of high-affinity histidine transport system [Yersinia mollaretii ATCC 43969] Length = 260 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 77/215 (35%), Gaps = 13/215 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 +K G + F A+G+ GFD+D + L I +K ++ + +L++K Sbjct: 28 VKIGTDPTYAPFESKNASGELVGFDIDIAKELCKRI---DTKCTFVESDFDALIPSLKAK 84 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGT 154 +ID + + T R+ + F + I K I ++ L G + V G+ Sbjct: 85 KIDAIISSLSITEKRQKEIA--FTDKLFAANSRLIAAKGSTIEPTLVALKGKRVGVLQGS 142 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T E ++ + + ++ + I A + R DA D A L ++ Sbjct: 143 TQEAFANAEWQPKGID--IVAYQNQDLIYADLASGRIDAAFQDEVAASEGFLKQAIGKDY 200 Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244 + + + + DTE + Sbjct: 201 IFAGPSVKNDQFFGVGTGMGLRKDDTELKAALDKA 235 >gi|257125143|ref|YP_003163257.1| extracellular solute-binding protein family 3 [Leptotrichia buccalis C-1013-b] gi|257049082|gb|ACV38266.1| extracellular solute-binding protein family 3 [Leptotrichia buccalis C-1013-b] Length = 263 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 81/248 (32%), Gaps = 11/248 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF--LKCGINTGLVGFAEVKANGDWKG 58 M ++ + LI LF S G +K G F +G G Sbjct: 1 MKNILKITGILLIGLFLISCGGKQENSKSGSSEGKQKVKVGTEGVYAPFTFTDGSGKLTG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 +DV+ + D I+++P FL L+SK+ D ++ RE F Sbjct: 61 YDVEVVEEIGKRANLD---IEFVPTPWDSMFLGLESKKFDFIANEIAKNPEREK--KYTF 115 Query: 119 RPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 I+ K + I ++ L G + G+ TL D F + + Sbjct: 116 SDDYLVSAAQIIVKKGRTDIKTLEDLKGKRVMTGVGSNYNKTLTD-FDKNKEINYAYFDG 174 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 V + DA D T R + I+ + ++K+P+ + E Sbjct: 175 NVSIALEEIAQGKADATLNDRLT--VGYFTKQRGNLVEIVGEPVTKTPVYFTFRKDSEEL 232 Query: 238 YNIVSWTH 245 N ++ Sbjct: 233 KNKINKAL 240 >gi|188527762|ref|YP_001910449.1| ABC-type polar amino acid transport,periplasmic component [Helicobacter pylori Shi470] gi|188144002|gb|ACD48419.1| ABC-type polar amino acid transport,periplasmic component [Helicobacter pylori Shi470] gi|308063767|gb|ADO05654.1| ABC-type polar amino acid transport,periplasmic component [Helicobacter pylori Sat464] Length = 258 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 32/250 (12%), Positives = 75/250 (30%), Gaps = 13/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ +L + FF F +S+ + + + G F G G+D Sbjct: 1 MKKVLFLFLLVIS--FFGGFLNASSLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R L+ + I++ + L+S + D+++ T ++ Sbjct: 59 VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQATFDKSL 114 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G ++ K I + + G +T A + + + Sbjct: 115 PYSYSGTIMLVRKDENRIKGIQDIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSM 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R D A+ T+ + + I + + Sbjct: 169 AQALLLVAQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALE 228 Query: 240 IVSWTHYAMV 249 +++ ++ Sbjct: 229 LINQAMQRLI 238 >gi|9929262|emb|CAC05301.1| mucus adhesion promoting protein [Lactobacillus reuteri] Length = 263 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 65/215 (30%), Gaps = 18/215 (8%) Query: 1 MY--KDFFVSILCLI----ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K ++I+ L + + ++++ ++ +G L G+ ++ N Sbjct: 1 MKFWKKALLTIVALTVGTPAGITSVSAASSAVNSELVHKGELTIGLEGTYSPYSYR-KNN 59 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GF+VD +A++ + ++P L S + D++ N T R Sbjct: 60 KLTGFEVDLGKAVAKKMGLKA---NFVPTKWDSLIAGLGSGKFDVVMNNITQTPERAK-- 114 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F I+ I S+ + G I GT + K + Sbjct: 115 QYNFSTPYIKSRFALIVPTDSNIKSLKNIKGKKIIAGTGTNNANVV------KKYKGNLT 168 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + R A YA N Sbjct: 169 PNGDFASSLDMIKQGRAAGTINSREAWYAYSKKNS 203 >gi|297157334|gb|ADI07046.1| arginine/ornithine binding protein [Streptomyces bingchenggensis BCW-1] Length = 323 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 87/292 (29%), Gaps = 42/292 (14%) Query: 1 MYKDFFVS--ILCLIILFFTSFSTN-------------------ASILGDIKKRGFLKCG 39 M V+ I L T S+ DI+ G +K G Sbjct: 15 MKSKAAVAGAIAVTGALLLTGCGDQRDKTTTTTSAGDTNKAPLFGSLPKDIQSAGVIKVG 74 Query: 40 INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 + NG G D D AL + ++ L L+S++ DI Sbjct: 75 SDIAYPPVEFK-KNGQVVGLDPDLAAALGKVLGVK---FEFNNTKFDGLLLGLRSQRYDI 130 Query: 100 LSRNTDWTLLREI----------SLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGAS 147 R+ G+ F + G K +GI++ L G Sbjct: 131 AMSAMTDNKSRQEGVDADTGKRVGKGVDFVD-YFTAGVSIYTKKGADQGITTWDDLCGKK 189 Query: 148 ICVQAGTTTELTLAD----YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 I VQ T ++ + K ++ E RA DA + D Sbjct: 190 IVVQRATVSQDLAKAQSKSCEEKGKGKIAIEAYDDDIEAQTRLRAGGADAGSSDFPVAAY 249 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 T+ ++ ++ + + +P A+ +G+ + + + ++ E Sbjct: 250 AVKTSGGGNDFQLVGEQVEAAPYGIAVPKGNDQLRDALKQALALIIANGEYD 301 >gi|254477975|ref|ZP_05091360.1| putative carboxycyclohexadienyl dehydratase [Ruegeria sp. R11] gi|214028560|gb|EEB69396.1| putative carboxycyclohexadienyl dehydratase [Ruegeria sp. R11] Length = 256 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 80/246 (32%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M + + + + L ++ S L +I G +K G + +KGF Sbjct: 1 MKQFLKAAAVAALGLISAGGASAQSALNEILDSGVMKVGTTGDWNPMSLRDPATNSYKGF 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D L+ + + ++++P + K + + Q L+ + + R G + Sbjct: 61 DIDIMTELAKDLGVE---VEFVPTDWKTLVNGVVAGQYH-LTGSASISPARMKVAGFSES 116 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 I+ K ++ ++ GT E + ++F V E Sbjct: 117 YISVEMYPFTTEDKADRFDGYDSINNPDVTVATTLGTVFEKNVREWFPQA----TIKVVE 172 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A R D + L P V + S + +A + Q D W Sbjct: 173 APARGFQEVLAGRADVFITSNIEGATLTSKF--PVVRVTNAEARSPTAIAMLLPQADQVW 230 Query: 238 YNIVSW 243 N V+ Sbjct: 231 INYVNN 236 >gi|251790904|ref|YP_003005625.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] gi|247539525|gb|ACT08146.1| extracellular solute-binding protein family 3 [Dickeya zeae Ech1591] Length = 260 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 99/261 (37%), Gaps = 25/261 (9%) Query: 1 MYKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M++ + I+ + + +F+ K+ ++ G++ F +G+ GF Sbjct: 1 MFRKLSLLKIIVIFTISPFAFA----------KQDVIRIGVDLTFPPFQMRDEHGNPAGF 50 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D A+ ++ +K Y+ + AL +K+ID++ T R+ S+G F Sbjct: 51 DIDITDAICKSV---NAKCDYIVNTFDAQIPALLAKKIDVI-SPLGVTKKRKESIG--FS 104 Query: 120 PITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + F+ K+ + + L G +I VQ GT E ++ + I + Sbjct: 105 DYAFHLPTRFVARKETNLLPQADMLRGKNIAVQQGTIQEAYANKHWLPAG--VNVITYPD 162 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQG 233 E I A R D AL L + + ++ + L A I + Sbjct: 163 QEAIYEDLYAGRVDGALCPSVALTFGFLQTPEGKDFELKGPEVTDTDLFSIGSAYGIRKD 222 Query: 234 DTEWYNIVSWTHYAMVTAEEL 254 DT+ +++ ++ E Sbjct: 223 DTDTKEMLNLGLKNIMNNGEF 243 >gi|295095886|emb|CBK84976.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 257 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 83/251 (33%), Gaps = 25/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L + + SFS+ A+ L+ G+ F A+G+ +GFD Sbjct: 1 MK----LRALVVGMGLLCSFSSFAAT--------ELRYGLEAEYPPFESRNASGELEGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ A+ A K ++ + L +K+ D ++ + T R + F Sbjct: 49 IELGNAICKAA---ALKCSWVETSFDALIPGLVAKKFDAINSAMNITEQRRK--SIDFTQ 103 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + + + L G +I V G+ E ++++ H + ++ Sbjct: 104 PIYRIPSQLVGKAGSAVEATPEGLKGKTIGVLQGSIQETYAKEHWEKHG--VTVVSYKDQ 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGD 234 R DA +A A L+ + + +S + + +GD Sbjct: 162 NMAWGDLLNGRIDASLVMSAAGQAGFLSKPQGKGFGFIGKPVSDDTILGSGIGFGLRKGD 221 Query: 235 TEWYNIVSWTH 245 + Sbjct: 222 EATKKQLDAAI 232 >gi|237737257|ref|ZP_04567738.1| amino acid-binding protein [Fusobacterium mortiferum ATCC 9817] gi|229421119|gb|EEO36166.1| amino acid-binding protein [Fusobacterium mortiferum ATCC 9817] Length = 241 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 85/246 (34%), Gaps = 24/246 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +++ +++L ++ + + + G N F + G+ GFD Sbjct: 1 MKKLFKKALIGMMVLSLSATA---------LAKEKIYVGTNAEFPPFEYL-EKGEITGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ + + ++++ + ALQ K++D++ T R+ ++ F Sbjct: 51 IELMNEMGKVL---DAEVKVQDMAFDGLLPALQMKKVDVVIAGMTATEERKKTVA--FTQ 105 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y Q I+ + I S L G + V G T + +++ F Sbjct: 106 PYYTASQVIIVKEGDNSIKSFDDLKGKRVGVMLGFTGDTVVSEI-----EGVKVERFNAA 160 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A +A + DA D N I + ++ A A+ + D E Sbjct: 161 YAGIMALKADKVDAVVLDSEPAKNYVKQNAG---LKIAEAVAAQEEYAIALRKNDKELLE 217 Query: 240 IVSWTH 245 + Sbjct: 218 KIEKAL 223 >gi|218887008|ref|YP_002436329.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757962|gb|ACL08861.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 248 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 67/215 (31%), Gaps = 12/215 (5%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 L +T F +G + GFD++ +A++ + + P++ L Sbjct: 23 AKKLVVAHDTNFKPFEFKGEDGKYTGFDIELWQAVAKIVGVEYE---LQPMDFNGIIPGL 79 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQ 151 Q+ ID+ R + F Y G ++ + I SV L G + + Sbjct: 80 QTGNIDVGIAGITIKAER--QQVIDFSDPYYDSGLMILVREGDTAIKSVEDLKGKIVATK 137 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 T++ + A +F + + + DA D+ + +T + Sbjct: 138 TATSSVDFVKACASAK----EVKLFPNNDGMFFELMSGGADAVVFDMPVVKEFAMTAGKG 193 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + P + +G V+ Sbjct: 194 KVKTVGP-LYQGQSYGIGFPKGSP-LVAKVNEALK 226 >gi|86359585|ref|YP_471477.1| amino acid ABC transporter substrate-binding protein [Rhizobium etli CFN 42] gi|86283687|gb|ABC92750.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 257 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 69/231 (29%), Gaps = 14/231 (6%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 L IK G K G F +G GFDV+ A+++ + ++ Sbjct: 23 AGENLAAIKSAGVFKIGTEGTYAPFTYHDESGKLVGFDVEIGEAIAAKLGVKAE---FVE 79 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVS 141 L +K+ D + T R+ F I+ + I + + Sbjct: 80 GKWDGLIAGLDAKRYDTVINQVGITEARK--QKYDFSEPYIASKAVLIVREGDDSIKTFA 137 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G Q+ T+ +A A + + ++ R DA D + Sbjct: 138 DLKGKKSA-QSLTSNFGKIATESGA-----ELVGTDGFDQSIQLVLTKRADATINDSLSF 191 Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 K I + + I + + E ++ A + A+ Sbjct: 192 LDFKKHKPDAPV-KIAAEQENADYSGIIIRKNEPELLAEINKAL-AEIKAD 240 >gi|239636042|ref|ZP_04677056.1| L-cystine-binding protein TcyA [Staphylococcus warneri L37603] gi|239598313|gb|EEQ80796.1| L-cystine-binding protein TcyA [Staphylococcus warneri L37603] Length = 260 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 37/256 (14%), Positives = 78/256 (30%), Gaps = 12/256 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F I + +L +++ K ++ G F G+D Sbjct: 1 MKRLLFCVIALVFVLAACGNNSSKDSKSSSKDDNTIRVGTEGTYAPFTFHNKQDKLTGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + K+++ + F L + + D+++ RE F Sbjct: 61 IDVIKAVAKE---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINKDREKKYK--FSN 115 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + ++ +K I S + + G + Q T+ LA A + Sbjct: 116 PYTYSSAVLVVRENEKNIKSFNDVKGKKLA-QTFTSNYGQLAKDKGAK-----ITKVDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + ++R DA D + K I D + D + Sbjct: 170 NQSMDLLLSNRVDATFNDSLSYLDYKKQKPNAKIKAIKGDAEKNKSAFAFSKKVDDKTVQ 229 Query: 240 IVSWTHYAMVTAEELG 255 + + + EL Sbjct: 230 KFNDGLKKIEESGELK 245 >gi|260754694|ref|ZP_05867042.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 6 str. 870] gi|260761740|ref|ZP_05874083.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 2 str. 86/8/59] gi|260672172|gb|EEX58993.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 2 str. 86/8/59] gi|260674802|gb|EEX61623.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 6 str. 870] Length = 179 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 57/153 (37%), Gaps = 9/153 (5%) Query: 1 MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M +++ + + + A+ + + ++ L G F +K +G G Sbjct: 1 MKMRVLKRIAMATSVAALAITVGSMAAGVANAEEPLKLTIGTEGAYPPFNFIKPDGTLSG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD RAL + +K +++ + ALQS + D + T R+ + F Sbjct: 61 FDVDIARALCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFIASMSITDERKK--QVDF 115 Query: 119 RPITYFDGQGFIMHKKKGIS--SVSQLSGASIC 149 Y G K I + L+G +I Sbjct: 116 TNKYYNTPPGIAAPKDTDIKGVTKEDLAGKTIG 148 >gi|319780315|ref|YP_004139791.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166203|gb|ADV09741.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 268 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 87/263 (33%), Gaps = 16/263 (6%) Query: 2 YKDFFVSILCLIILFFTSF-----STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 + F SI +++L F + +A L DI K G + G+ F+ A+ Sbjct: 3 IRKTFASIAAVLMLGTAGFGLAVQAASADALADITKAGTINVGVFADFPPFSSASADMSL 62 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 KG+D+D + ++ + + I + + R L ++D+L +E + Sbjct: 63 KGYDMDVAQYIADTLKVKLNPIA---VTGQNRIPYLNDHRVDLL---MSVGYSKEREQVI 116 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F I + L+ SI V GT + +L + A F Sbjct: 117 DFAAAYAPYYIAVIGPAALAVKGKEDLADKSIAVNRGTLEDTSLTEAAPA---SADIKRF 173 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + A+ + + + D + S S + + + + Sbjct: 174 DNYNSVIQAFISGQTQLMVVGNDVGAQVLAKQDALKPEQKFQLLTSPSHIG--LNKNEDG 231 Query: 237 WYNIVSWTHYAMVTAEELGITQK 259 V+ M+ +L + K Sbjct: 232 LKKAVNDAVAKMLADGKLDESSK 254 >gi|116628198|ref|YP_820817.1| ABC-type amino acid transport system, periplasmic and permease components [Streptococcus thermophilus LMD-9] gi|116101475|gb|ABJ66621.1| ABC-type amino acid transport system, periplasmic and permease components [Streptococcus thermophilus LMD-9] Length = 736 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 63/210 (30%), Gaps = 15/210 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ F + ++ + +T F ++ +KG D Sbjct: 1 MKKKLLTLFLSVMSALFVFGAKASAS--------TISVVSDTAYAPFEFKDSDQTYKGID 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ D + A+QS Q D L T T R+ F Sbjct: 53 VDIINEVAKRKNWD---VNQTYPGFDAAVNAVQSGQADALMAGTTVTDARKKV--FTFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y +S QL G ++ V+ GT + L A + F+ + Sbjct: 108 TYYDTSIVIYTRSNDKVSDYKQLKGKTVGVKNGTAAQTWLDKN--ASKYSFTVKTFDTSD 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + + A D + Sbjct: 166 LMNNSLDSGSVYAAMDDTPVVQYAIGQGKD 195 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 7/174 (4%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 +++ F +G + G DVD A++ + ++ A+QS Q Sbjct: 283 TISMDSSFAPFEYQNGSGKYVGIDVDIINAIAK---NQGFNVKLTNPGFDASLNAVQSSQ 339 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 D + T R+ F Y + K I L G ++ + GT++ Sbjct: 340 ADAVLAGMTITDARK--QIFDFSDPYYTSNIRLAVKKGSNIKKYEDLKGKTVGAKNGTSS 397 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 L + + ++ + + + D+ D + L Sbjct: 398 YSWLEENADKYGF--TLRAYDEASTMYDSLNSGSIDSLMDDEAVLLYAIQQGRN 449 >gi|330836703|ref|YP_004411344.1| extracellular solute-binding protein family 3 [Spirochaeta coccoides DSM 17374] gi|329748606|gb|AEC01962.1| extracellular solute-binding protein family 3 [Spirochaeta coccoides DSM 17374] Length = 258 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 75/246 (30%), Gaps = 12/246 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +L + ++ + S K++ N V NG+ G++ Sbjct: 1 MKTKTLALLLIISLVSVMAVGAAGSK-ESSKEKTSYVFAANAAWPPLEYVDENGNVVGYE 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ + + A+ + F L + D ++ T R+ ++ F Sbjct: 60 IELIQEIGKAVGK---TFTIRNVAWDGIFAGLANGAYDGIASGVSVTEERKATM--DFST 114 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Q I+ GISS L G + VQ GTT + L D + ++ + Sbjct: 115 PILQVKQAIIVRSGTTGISSGDDLVGKKVGVQIGTTGHIALEDTYGKA---ITIRAYDEI 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR--PSEHVILPDIISKSPLAPAIIQGDTEW 237 DA D L N V +A + +G+ Sbjct: 172 GLAIEDMLNGNLDAAVADSIIASDFVLANKNYQGKLFVSGEASSIAEDIAIVVPKGNVYL 231 Query: 238 YNIVSW 243 +V+ Sbjct: 232 LGLVND 237 >gi|260778079|ref|ZP_05886972.1| hypothetical amino acid ABC transporter amino acid-binding protein [Vibrio coralliilyticus ATCC BAA-450] gi|260606092|gb|EEX32377.1| hypothetical amino acid ABC transporter amino acid-binding protein [Vibrio coralliilyticus ATCC BAA-450] Length = 257 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 78/254 (30%), Gaps = 26/254 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V +L +F+ ++ + F +G+ GFD Sbjct: 1 MKKVLSVIACTATLLSTPTFAKQ------------VRLASDFTYPPFNYKDQSGNPTGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ AL + D ++ N +L +++ D++ + T R+ + F Sbjct: 49 IEIADALCAEAKLD---CTWVAQNWDSLIPSLLARKSDVIMASMRITEERKK--RVLFTN 103 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y F+ + S + I VQ GT + + D F + Sbjct: 104 KYYQTPARFVTATDAKVDISAQGMKDKVIGVQGGTIHDRYVTDKF---GDVAEIKRYTGQ 160 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +E+ R D G+ L L D + ++ A A+ Q D Sbjct: 161 DEVYIDMVNGRLDLTFGNSDQLALAFLAKDIGQGFKFVGQPVTDKAYIGEGTALALRQND 220 Query: 235 TEWYNIVSWTHYAM 248 + A+ Sbjct: 221 KALAEKFNKAIVAI 234 >gi|228477416|ref|ZP_04062052.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus salivarius SK126] gi|228250851|gb|EEK10039.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus salivarius SK126] Length = 282 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 70/256 (27%), Gaps = 18/256 (7%) Query: 1 MYKDFF----VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K FF + + + ++ +S ST I+KRG +K L + + Sbjct: 1 MKKRFFAVFSLILAAVFLVACSSQSTGEKNWEKIEKRGSIKVATAGTLYPQSYHDDKNNL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G+DV+ + + + KI + + A+ S Q+D N + Sbjct: 61 TGYDVEILKEVGKRL---KLKIDFTEMGVDGMLTAVNSGQVD--IANYSLEDDNKNVKKF 115 Query: 117 AFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + ++ GISS L G A T + Sbjct: 116 LRSEPYKYSFTSMVVRESDNSGISSWKDLKGKKAAGAASTKYMKIAKKM----GAELVVY 171 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL--APAIIQ 232 + R D D V + D I +P + Sbjct: 172 DNVTNDVYMQDLVNGRTDVIVNDYYLQKMAVAAIKDKYP-VKINDGIYSNPYSTSFTFSL 230 Query: 233 GDTEWYNIVSWTHYAM 248 + V+ M Sbjct: 231 KNKTLQEKVNKAIKDM 246 >gi|329297838|ref|ZP_08255174.1| extracellular solute-binding protein family 3 [Plautia stali symbiont] Length = 250 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 84/248 (33%), Gaps = 25/248 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K L F + + + L G++T V F + + + GFD+D Sbjct: 7 KLKITLALVACSASFIAAAQD-----------KLTVGVDTAFVPFEFKQGD-KYVGFDID 54 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ + + P++ LQS+ +D+ T R+ + F Sbjct: 55 LWDAIAKKM---NVSYELHPMDFGGLIPGLQSRNLDVAMAGITITDARK--QVVDFSNGY 109 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y + I S L+G + ++ GT + +KA+ + F ++ Sbjct: 110 YDADLLMAVKSDDNSIKKFSDLTGKKVGLKQGTAAASFMKSKYKANY-----VEFPNIDN 164 Query: 182 IDAAYRAHRCDAYTGDIS-ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 +A DA D LY +K D + D I ++ + ++ Sbjct: 165 AYLDLQAGNLDAVVHDSPNVLYYVKTAGDGKVKASGENDTILPQQYGFSMQK-NSSLTPK 223 Query: 241 VSWTHYAM 248 ++ A+ Sbjct: 224 INAALQAL 231 >gi|239818081|ref|YP_002946991.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239804658|gb|ACS21725.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 252 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 70/214 (32%), Gaps = 9/214 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L + FA + GFD+D A++ KI+ + F AL + Sbjct: 27 ELIVASSATYAPFAFENKDKQIVGFDIDIINAIARQ---QGLKIKVVNTPFTGIFGALNN 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 +D++ R+ F P + Q + K ++S+ L+G I V + + Sbjct: 84 GDVDLVISGVTINEKRK--QSYDFTPPYFAARQLIALPKGSTVASLKDLAGKKIAVVSAS 141 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T + + F + FE I + DA GD + P Sbjct: 142 TADDIASREFGK--TSPNIRRFESTPLIISELAGGGVDAAMGDNGVIAYRVAQ--NPELK 197 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + + + +GD + ++ A+ Sbjct: 198 TLDDKSFPEEGFGIVVKKGDKALLDKLTAGLAAI 231 >gi|119475375|ref|ZP_01615728.1| amino acid ABC transporter, periplasmic amino acid-binding protein [marine gamma proteobacterium HTCC2143] gi|119451578|gb|EAW32811.1| amino acid ABC transporter, periplasmic amino acid-binding protein [marine gamma proteobacterium HTCC2143] Length = 268 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 85/243 (34%), Gaps = 11/243 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + V L+ L + A DI G L+ G++ + +G G ++ Sbjct: 5 IRAILVVCTVLVSLSVIASEEQARNFDDIVASGELRIGVSI-FPPWVMRAKDGQLIGSEI 63 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D + L++ + P Y K AL +K+IDI+ R ++ + F Sbjct: 64 DMAKRLAADMGLKPELALY---EWKALITALNAKEIDIIISGMGINPAR--AMQVNFSRP 118 Query: 122 TYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 G G + S+ +L +I + T AD + + F Sbjct: 119 YGDAGVGLAANTALTSTFKSMDELKQPNINIGVIANTVS--ADVATRLFSRTNIKAFATE 176 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E A + A+ G L L + + ++S A+ +GD+++ N Sbjct: 177 DEAQDALINGKLHAFIGANPLPAFLALKYPGKVDVPLEKPLLSFKE-GLAVRKGDSDFLN 235 Query: 240 IVS 242 ++ Sbjct: 236 YLN 238 >gi|312869289|ref|ZP_07729456.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3] gi|311095163|gb|EFQ53440.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3] Length = 502 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 79/226 (34%), Gaps = 15/226 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 L IK++G L G + G F ++ GF++ R L+ + ++ Sbjct: 48 DSLQKIKQKGVLVVGTSAGYPPFEFTTKKDGKTEYVGFEMSLARQLAKDLGVK---LEIK 104 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KGISS 139 ++ +AL+S +ID+ + T RE + F + + F++HK+ Sbjct: 105 NMDFDSLLVALESHKIDVAIAGINITPEREK--SVDFSKTYHKGTKYFLIHKQDKDKYKD 162 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 G ++ + G + Y H + + A +AH+ D D + Sbjct: 163 YMDFKGKTVGTENGAMEYAMIKKYIP----DVHEKGLAKWSSLVIALQAHKLDGVLMDSA 218 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 A N + S +A A+ +G V+ T Sbjct: 219 TAKAFAQNNSDLYAFNSHMKVTSDG-VAVALPKGANSLKAAVNKTV 263 >gi|125624721|ref|YP_001033204.1| glutamine ABC transporter permease and substrate binding protein [Lactococcus lactis subsp. cremoris MG1363] gi|62421458|gb|AAX82492.1| GlnP [Lactococcus lactis subsp. cremoris MG1363] gi|124493529|emb|CAL98510.1| glutamine ABC transporter permease and substrate binding protein [Lactococcus lactis subsp. cremoris MG1363] gi|300071518|gb|ADJ60918.1| glutamine ABC transporter permease and substrate binding protein [Lactococcus lactis subsp. cremoris NZ9000] Length = 714 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 34/236 (14%), Positives = 73/236 (30%), Gaps = 15/236 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K FF L + + + +K +K ++ F W G D Sbjct: 1 MKKLFFALALMFATVTAFLVAPS------VKAETTVKIASDSSYAPFEFQNGQKKWVGID 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ + K++ L++ Q+D + T R+ F Sbjct: 55 VDVMQEVAK---INDWKLEMSYPGFDAALQNLKAGQVDGVIAGMTITDERK--DTFDFSN 109 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K ++ S+L G ++ + GT + L + K + + + Sbjct: 110 PYYTSALTIATTKDSKLTDYSELKGKAVGAKNGTAAQTWLQENQKKYGY--NIKTYSDGV 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + A+ + ++ + P I A+++G + Sbjct: 168 HMFASLSSGNIVGAMDEVPVI--SYAMKQGQDLATNFPSISLSGGYGFAVMKGKNQ 221 Score = 94.0 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 66/221 (29%), Gaps = 11/221 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 K+ + F N + G DVD A++ + K+++ + + + Sbjct: 258 KKDVYTIASDNSFAPFEFQNDNKQFTGIDVDLLNAIAK---NQGFKLKWNFIGFQAAVDS 314 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150 +QS D + T R+ + Y I S L G ++ Sbjct: 315 VQSGHADGMMSGMSITDARK--QVFDYGNPYYSSNLTIATSSTDDSIKSWKDLKGKTLGA 372 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + GT + L D+ K + F + ++ +A D + K + Sbjct: 373 KNGTASFDYLNDHAKEYGY--TVKTFTDATTMYSSLNNGSINALMDDEPVI---KYAIKQ 427 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 + I A+ +G + A + A Sbjct: 428 GQKFTTPIKPIPDGQYGFAVKKGSNPELIEMFNNGLANLRA 468 >gi|293605652|ref|ZP_06688031.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292815936|gb|EFF75038.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 267 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 85/256 (33%), Gaps = 18/256 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + ++ A + L +T V F + N + GFD Sbjct: 18 MIKRKVAAALVGLSVAMFGAASGAQA-----QGKELVVATDTAFVPFEFKQGN-TYVGFD 71 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + K + P++ LQ+K ID + + F Sbjct: 72 VDLWAAIAKEL---NLKYKLQPMDFNGIIPGLQTKNIDAALAGITI--RDDRKKVIDFSD 126 Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G + K I LSG ++ V+ GT T D+ KA +F + Sbjct: 127 PYYESGLAILVGEKNTDIKDAKSLSGKTVAVKTGTATV----DFLKAQVPDAKLKLFPNI 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + T + ++ + S A +G +E Sbjct: 183 DNAYLELATGRVDAAVHDTPNVQYYANTAGKGRV-KVVGSVKSGDFYGIAFPKG-SELVP 240 Query: 240 IVSWTHYAMVTAEELG 255 V+ A+ + Sbjct: 241 QVNKALAALKANGQYD 256 >gi|325293912|ref|YP_004279776.1| nopaline ABC transporter substrate-binding protein [Agrobacterium sp. H13-3] gi|325061765|gb|ADY65456.1| nopaline ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 264 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 74/228 (32%), Gaps = 24/228 (10%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 G L G ++ A G+ GFD D L + + K +++ A Sbjct: 21 AEGELSIGTEGAYPPWSMADAAGNVTGFDADVGNLLCTKL---AVKCRFVVQAFDGLIPA 77 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-------LS 144 L++K+ D++ T R+ + F F++ K ++ + L Sbjct: 78 LKAKRFDVIISGMSITQDRKK--EINFSVGYAELANMFLVPKTSDLAGIKDIDTLLKGLD 135 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G +I VQ GTT + N ++ ++ + + R +A D SAL Sbjct: 136 GKTIGVQTGTTHAHFIEKRVPNAN----LKTYDTLDNMQIDLASGRVEAAFADASALQDF 191 Query: 205 KLTNDRPSEHVILP-------DIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + D + I + +TE + Sbjct: 192 LAK-PEGKDFQFVDVKVQSKFDSTLGEGIGVGIAKENTELKTKIDKAL 238 >gi|308062255|gb|ADO04143.1| ABC-type polar amino acid transport,periplasmic component [Helicobacter pylori Cuz20] Length = 258 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 32/250 (12%), Positives = 75/250 (30%), Gaps = 13/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ +L + FF F +S+ + + + G F G G+D Sbjct: 1 MKKVLFLFLLVIS--FFGGFLNASSLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R L+ + I++ + L+S + D+++ T ++ Sbjct: 59 VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQATFDKSL 114 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G ++ K I + + G +T A + + + Sbjct: 115 PYSYSGTIMLVRKDENRIKDLKDIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSM 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R D A+ T+ + + I + + Sbjct: 169 AQALLLVAQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKRQEKALE 228 Query: 240 IVSWTHYAMV 249 +++ ++ Sbjct: 229 LINQAMQRLI 238 >gi|302561350|ref|ZP_07313692.1| ABC transporter substrate-binding protein [Streptomyces griseoflavus Tu4000] gi|302478968|gb|EFL42061.1| ABC transporter substrate-binding protein [Streptomyces griseoflavus Tu4000] Length = 283 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 81/256 (31%), Gaps = 25/256 (9%) Query: 3 KDFFVSILCLIILFFTSFST----------NASILGDIKKRGFLKCGINTGLVGF-AEVK 51 + + ++ + ++ A + +K G L + F +E+ Sbjct: 10 RVLAATTATAGLVLLAACTSTDDGGSGSKTAAGGVELVKA-GQLTTCTHLPYPPFQSEID 68 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 G +GFDV ++ + +I P + L S + D+ + T R+ Sbjct: 69 --GKVQGFDVALIDLVADDLGVK-QQILDTPFENFKTGAFLNSGECDLAAAGMTITDERK 125 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNM 169 + F + Q ++ K G+ S++ + + QA TT E A Sbjct: 126 K--NVDFSDPYFNATQAVLVDKGSGVGSLADVKAKNVKLGAQAQTTGEDY------AKGQ 177 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + P+ FE + + R + A D + + I + Sbjct: 178 GFDPVSFESSDAVLNGLRTGQVKAVVIDYPVVQGWLKDKANADAFRVAEQIDTGEEYGFT 237 Query: 230 IIQGDTEWYNIVSWTH 245 + +G+T + Sbjct: 238 VKKGNTALREAIDKAL 253 >gi|324994617|gb|EGC26530.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK678] gi|327462473|gb|EGF08797.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1] gi|327474328|gb|EGF19734.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK408] gi|327489715|gb|EGF21505.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1058] Length = 729 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 59/206 (28%), Gaps = 16/206 (7%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F +L L F + A +K +T F ++ +KG DVD Sbjct: 12 FLAVLLTLFPFFALGVTAQADT---------VKIVSDTAYAPFEFKDSDQTYKGIDVDII 62 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ D I A+Q+ Q D + T RE Y Sbjct: 63 NKVAEIKGWD---IDMSFPGFDAAVNAVQAGQADAIMAGMTKTSEREKV--FTMSDTYYD 117 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 K IS QL G + V+ GT + L + F+ + + Sbjct: 118 TKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKN--KDKYDFTLKTFDTGDLMYN 175 Query: 185 AYRAHRCDAYTGDISALYALKLTNDR 210 + A DA D + Sbjct: 176 SLSAGDVDAVMDDQPVIEYAINQGQN 201 Score = 89.0 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 28/236 (11%), Positives = 70/236 (29%), Gaps = 14/236 (5%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 + ++ F + + G D++ +A++ ++ ++ Sbjct: 277 KDKYIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QGFTVEVTNPGFDAAINSV 333 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152 Q+ Q D + T R+ + + Y + I S +L G ++ V+ Sbjct: 334 QTGQADGIIAGMSVTDARKKT--FDYSDPYYTANSILAVKDSSNIKSYEELKGKTVGVKT 391 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT ++ L + + F + + A D + + Sbjct: 392 GTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVMDDEPVVKYAIKQGKK-- 447 Query: 213 EHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 L I +P A ++ + + +E G Q+ +++ Sbjct: 448 ----LKTPIEGTPSGQVAFAVKKGSNPELIEMFNNGLANLKESGKYQEILDKYLAS 499 >gi|15903163|ref|NP_358713.1| amino acid ABC transporter permease/amino acid-binding protein [Streptococcus pneumoniae R6] gi|15458747|gb|AAK99923.1| ABC transporter membrane spanning permease - glutamine transport [Streptococcus pneumoniae R6] Length = 721 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L L +F I K +K +T F ++ +KG D Sbjct: 1 MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + IQ A+Q+ Q D + T RE Sbjct: 51 VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K IS QL+G ++ V+ GT + L + F+ + Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + A DA D + Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193 Score = 94.4 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 34/231 (14%), Positives = 69/231 (29%), Gaps = 16/231 (6%) Query: 1 MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +T A L I + ++ F ++ Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G D++ +A++ + I+ A+Q+ Q D + T R+ + Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y + + I+S L G ++ V+ GT ++ L + + K Sbjct: 344 FDFSESYYTANTILGVKESSNIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401 Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223 F +D + DA D + P + + Sbjct: 402 FADGSSMDDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPISGTPIGETAFA 452 >gi|254254941|ref|ZP_04948258.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] gi|124899586|gb|EAY71429.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] Length = 260 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 35/257 (13%), Positives = 76/257 (29%), Gaps = 23/257 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + L L + ++ ++ +G GF Sbjct: 1 MKQWMATLALTLAAGTAHAGDWTG---------KEIRVAVDPTYPPLEYKLPDGTLTGFG 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + + ++ ++ + L +++ D+++ + T R +AF Sbjct: 52 VDITNALCAQL---RARCVWVESSFDGMIPGLLARKFDVIASSMTITPKR--MQQIAFTN 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 I K + S + L G + V+ G+ ++ + ++ Sbjct: 107 RISNAPARLIARKGSPLLPSAASLKGKRVGVEQGSAQADYAIANWQPAG--AQIVSYQNQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 E + A R DA A L + + + I + + + D Sbjct: 165 ELVYADLVTGRLDAAFQASIAASDGFLKKPQGKDFTFVGAPIDDAKYFGQGDGLGLRKQD 224 Query: 235 TEWYNIVSWTHYAMVTA 251 E + A + A Sbjct: 225 GELREAFNRAL-ATILA 240 >gi|259505861|ref|ZP_05748763.1| ABC amino acid transport system, secreted component [Corynebacterium efficiens YS-314] gi|259166535|gb|EEW51089.1| ABC amino acid transport system, secreted component [Corynebacterium efficiens YS-314] Length = 355 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 79/219 (36%), Gaps = 12/219 (5%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +I +RG L G++ + +G +GF+V + ++ IF +P + + + A + Sbjct: 93 EIFQRGRLIVGVDQSKNLLSFRDPVSGQLRGFEVQLAKEIARDIFGNPEAVDFRFIEAGD 152 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 L +D++ R+ T R + F ++ GI + L+G + Sbjct: 153 SLRGLSRGDVDMVIRSVSVTEDRLRRM--EFSTPYMRTQTRLLVMDNSGIQGIEDLAGNT 210 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +CV G+T + + A + + A GD + L + Sbjct: 211 VCVADGSTALQKTRAMAPE----SSILRTRNWSDCLMALQQQQAQAILGDDAVLAGIAAQ 266 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGD--TEWYNIVSWT 244 + ILP I++ A AI + +V Sbjct: 267 DP---YTRILPSILAWESYAVAIAPSRASRDTTGLVRQV 302 >gi|186474788|ref|YP_001856258.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184191247|gb|ACC69212.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 263 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 83/223 (37%), Gaps = 14/223 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L+ G+ F ANG+ +GFD+D A+ K ++ + ALQ + Sbjct: 30 LRYGLEAQYPPFESKGANGELQGFDIDIGNAVCK---TANLKCSWVETSFDGLIPALQGR 86 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGT 154 + D ++ + T R + F + Y I K G+ + L G + V + Sbjct: 87 KFDAINSAMNATEKR--RQAIDFTNVIYRVPTQLIARKDSGLQPTPESLKGKRVGVLQAS 144 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 E ++++ + + ++ ++ A A R DA A L+ + Sbjct: 145 IQETYAKAHWESAGVA--VVPYQDQNQVYADLVAGRLDATLVLAPAGQTGFLSRPDGKDF 202 Query: 215 VILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + + + +A I +GDT N ++ A V +E Sbjct: 203 AFVGEPVRDDKILGSGIAFGIRKGDTALRNQLNAAI-AKVQSE 244 >gi|123443060|ref|YP_001007034.1| glutamine ABC transporter periplasmic protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|238761029|ref|ZP_04622006.1| Glutamine-binding periplasmic protein [Yersinia kristensenii ATCC 33638] gi|238761282|ref|ZP_04622258.1| Glutamine-binding periplasmic protein [Yersinia kristensenii ATCC 33638] gi|332161056|ref|YP_004297633.1| glutamine ABC transporter periplasmic protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|122090021|emb|CAL12878.1| putative glutamine-binding periplasmic protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|238700256|gb|EEP92997.1| Glutamine-binding periplasmic protein [Yersinia kristensenii ATCC 33638] gi|238700509|gb|EEP93249.1| Glutamine-binding periplasmic protein [Yersinia kristensenii ATCC 33638] gi|318604933|emb|CBY26431.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Yersinia enterocolitica subsp. palearctica Y11] gi|325665286|gb|ADZ41930.1| glutamine ABC transporter periplasmic protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 247 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 76/220 (34%), Gaps = 13/220 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 L +T V F + + + GFD+D A++ + K P++ A Sbjct: 23 AEKELIVATDTAFVPFEFKQGD-KYVGFDIDLWDAIAKKL---DLKYTLKPMDFSGIIPA 78 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICV 150 LQ+K +D+ T R+ + F Y G ++ I + L+G + V Sbjct: 79 LQTKNVDLALAGITITDERKK--AVDFSDGYYNSGLLVMVKANNNDIKGEADLAGKVLAV 136 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++GT + DY KA+ F ++ DA D + T Sbjct: 137 KSGTGSV----DYAKANIKTKDLRQFPNIDNAYLELGTGNADAVLHDTPNILYFIKTAGN 192 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + + D I A QG ++ V+ ++ Sbjct: 193 G-QFKAVGDSIKAQQYGVAFPQG-SDLREKVNAALKSLKE 230 >gi|320008606|gb|ADW03456.1| extracellular solute-binding protein family 3 [Streptomyces flavogriseus ATCC 33331] Length = 319 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 74/238 (31%), Gaps = 20/238 (8%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +K G +K G N V NG G D D AL + ++ + Sbjct: 60 EKYQKSGVIKVGTNAEYAPMESV-ENGKIVGVDPDLAEALGKQLGVK---FEFTSGSFDG 115 Query: 88 RFLALQSKQIDILSRNTDWTLLREI---------SLGLAFRPITYFDGQGFIMHKKKG-- 136 AL + + DI + R+ G+ F + G K Sbjct: 116 LITALNTGRHDIAMSSITDNKQRQEGLDDSGKKLGKGVDFVD-YFLAGTAVYTKKGNPEG 174 Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKA----HNMKYHPIVFERVEEIDAAYRAHRCD 192 I S+ L G VQ GTT E L KA FE E ++ Sbjct: 175 IKSIEDLCGKGAAVQRGTTYEKALQKQSKACTDGGKKAVDIQSFENDTEAQTRVKSGGAV 234 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A D L + + ++ + + P A+ + +TE + + A++ Sbjct: 235 AGVNDYPVALDLARKANGGKDFEVVGEQVDAGPFGIAVNKDNTELRDALKEAVDAIIA 292 >gi|282851008|ref|ZP_06260382.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1] gi|311111018|ref|ZP_07712415.1| amino acid ABC transporter, permease/substrate-binding protein [Lactobacillus gasseri MV-22] gi|282557960|gb|EFB63548.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1] gi|311066172|gb|EFQ46512.1| amino acid ABC transporter, permease/substrate-binding protein [Lactobacillus gasseri MV-22] Length = 498 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 77/228 (33%), Gaps = 12/228 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWKGFDVDFCRALSSAIFDDPSKI 78 S+L IKK G L G + + G D++ + ++ + + Sbjct: 36 AEGSVLKKIKKSGELVVGTSADYPPLEFTASENGKTKYVGVDIELAKDIAQDLGVK---L 92 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGI 137 ++ +AL++ ++D++ T R+ S+ + + K Sbjct: 93 VIKNMSFDSLLVALETGKVDMVISAMTPTPERKQSVAFSKIYYKPSGEYFLVNKKDKDKY 152 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +S+ L G +I Q G+ + K ++ + A ++ + A + Sbjct: 153 TSIQSLKGQAIGAQTGSNQYNLVKSQMK----DSKLKGLGKINNLVLALQSGKVSAVVVE 208 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + N+ V ++S A AI +G E V+ T Sbjct: 209 E-LIAKAYAENNNSLAAVRSNLKETQSGNAVAIAKGQDELVAQVNKTI 255 >gi|167840666|ref|ZP_02467350.1| ABC transporter, solute-binding component [Burkholderia thailandensis MSMB43] Length = 284 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 75/247 (30%), Gaps = 18/247 (7%) Query: 1 MYKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M+K +L L +F + + +L IK + F V NG Sbjct: 1 MHKSVRRFVLALSGVFTLAAAAPVLAQDDLLARIKSNKEITVATEARYAPFEYVD-NGKI 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G+D D + ++ K++ L L + L +K+ DI+ R Sbjct: 60 VGYDADLMAYVLKSL--PDVKVKQLDLPFQGLLPGLDAKRFDIVVTAVTVNKDRADHFA- 116 Query: 117 AFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK----- 170 F G ++ I S + L+G + Q G+ L K Sbjct: 117 -FTLPVADATTGVLLRANESAIKSPNDLNGKVVGSQTGSAQLQALVALDKKLKEAGGLGI 175 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII-SKSPLAPA 229 + +E A R DA S L RP +LP I KS A Sbjct: 176 KQIKQYVSFDEAYADLAVGRLDAVA--QSVANLGPLMKSRPGVFTLLPQTIGPKSYFAWV 233 Query: 230 IIQGDTE 236 + Sbjct: 234 ARKDADS 240 >gi|223932270|ref|ZP_03624273.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis 89/1591] gi|223898951|gb|EEF65309.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis 89/1591] Length = 732 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 66/210 (31%), Gaps = 15/210 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + ++ +FF +K + + F ++ +KG D Sbjct: 1 MKKKLLMLLASVLPVFFIFTG--------VKADDTIDVVFDNAYAPFEFKDSDQIYKGLD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ ++ A+Q+ D L T T R+ F Sbjct: 53 VDIINEVAKRSGWTMTQ---SFPGFDAAVNAVQAGSADALMAGTTITEARKKV--FTFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + K ISS L G ++ V+ GT + L + + + F+ + Sbjct: 108 PYFDTKIVIATTKANTISSYKDLKGKTVGVKNGTAAQNFLEENKDKYGY--NVKTFDTGD 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + A DA D + + Sbjct: 166 LMYNSLSAGAVDAVMDDEAVIQYAIQQGQD 195 Score = 99.0 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 74/242 (30%), Gaps = 15/242 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L T ++ + +K + ++ F +G++ G D++ +A++ Sbjct: 262 LSLTGNASAKATP--VKSSYTIVA--DSSFAPFEYQDESGNYVGIDMELIKAIAEQ---Q 314 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 I A+Q+ Q D + T R+ F Y + Sbjct: 315 GFTITIQNPGFDAALNAVQAGQADAVIAGMSITDARKEI--FDFSNAYYTSNILLAVKNG 372 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+S L G ++ + GT + L + Y F+ + + + DA Sbjct: 373 SDIASYEDLKGKTVGAKNGTASYSFLEEN--KAKYGYTLKAFDEASSMYDSLNSGSIDAL 430 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEE 253 D L + A+ +G + E + + A+V + + Sbjct: 431 MDDE---AVLLYAIQQGRNFATPIPGEKSGEYGFAVKKGANPELIEMFNNGLAALVESGK 487 Query: 254 LG 255 Sbjct: 488 YD 489 >gi|269966667|ref|ZP_06180746.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio alginolyticus 40B] gi|269828734|gb|EEZ82989.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio alginolyticus 40B] Length = 272 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 85/255 (33%), Gaps = 19/255 (7%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K ++L L I T + + + IK+RG L+ G++T V +A G+ Sbjct: 1 MKLFKATITALLGLAIAMPTIAKEDVATTNVDQIKERGTLRVGMST-FVPWAMRNKQGEL 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GF++D + L+ K++++P AL +K+ D++ T R S + Sbjct: 60 IGFEIDVAKRLAQDSG---LKVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSV 114 Query: 117 AFRPITYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F G +K+ S I + G T + F Sbjct: 115 LFTEAYSHSGVQVAANKELASGFSEFSDFDSRRVKIAARRGAFTVQVARETFPKAK---- 170 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + F+ + A + + + + +S+ A A+ Sbjct: 171 ILQFDDDVQAFQEVLNGNAHAVIASSPKPEHETVKHSDKL-FLPFSERLSQGNEAFAVRL 229 Query: 233 GDTEWYNIVSWTHYA 247 G+ + + A Sbjct: 230 GEEDKKAFFNKWIEA 244 >gi|261404062|ref|YP_003240303.1| polar amino acid ABC transporter inner membrane subunit [Paenibacillus sp. Y412MC10] gi|261280525|gb|ACX62496.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. Y412MC10] Length = 482 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 102/296 (34%), Gaps = 18/296 (6%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F+V + L+++ + S G+ + G + F A+G + G Sbjct: 1 MKSLRVFYVFMSLLLLMAVGVPYGSVSAAGEPASGKTYQIGTDVTFAPFEFQDASGKFVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D+D A++ K + PL AL++ Q+D + T R+ F Sbjct: 61 IDMDLLDAIAKD---QNFKYEIKPLGFNAAVQALEANQVDGVIAGMSITDERK--QKFDF 115 Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + G + + + I S L G + V+ GT + + F+ Sbjct: 116 SDPYFDSGVVMAIRQDQESIKSYEDLRGKKVAVKTGTEGYSFAESISSKYGF--TIVPFD 173 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE- 236 ++ + A D L ++ + I+ ++ + A+ +G + Sbjct: 174 DSAQMYDDVKTGNSVACFDDFPVLA---YGVEQNNGLKIVTEMEPGASYGFAVSKGRNQE 230 Query: 237 -WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF-LGIDKSSNIGEALG 290 + + E I +K I + + N R+ L ++ ++ + LG Sbjct: 231 LLQKFNAGLVNLKASGEYDRIKEKYIGENAVSAPNQS--RWGLIVESLPSLLKGLG 284 >gi|182684032|ref|YP_001835779.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CGSP14] gi|303254264|ref|ZP_07340373.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS455] gi|303258876|ref|ZP_07344855.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP-BS293] gi|303261559|ref|ZP_07347506.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP14-BS292] gi|303264230|ref|ZP_07350150.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS397] gi|303266139|ref|ZP_07352032.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS457] gi|303268134|ref|ZP_07353934.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS458] gi|182629366|gb|ACB90314.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CGSP14] gi|301801904|emb|CBW34628.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pneumoniae INV200] gi|302598758|gb|EFL65795.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS455] gi|302637139|gb|EFL67627.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP14-BS292] gi|302639819|gb|EFL70275.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP-BS293] gi|302642351|gb|EFL72698.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS458] gi|302644309|gb|EFL74563.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS457] gi|302646042|gb|EFL76269.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS397] Length = 721 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L L +F I K +K +T F ++ +KG D Sbjct: 1 MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + IQ A+Q+ Q D + T RE Sbjct: 51 VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K IS QL+G ++ V+ GT + L + F+ + Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + A DA D + Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193 Score = 95.2 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%) Query: 1 MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +T A L I + ++ F ++ Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G D++ +A++ + I+ A+Q+ Q D + T R+ + Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y + + I+S L G ++ V+ GT ++ L + + K Sbjct: 344 FDFSESYYTANTILGVKESSNIASYEDLKGKTVSVKNGTASQTFLTENQSKYGYK--IKT 401 Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223 F + + DA D + P + + Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPISGTPIGETAFA 452 >gi|51595717|ref|YP_069908.1| ABC transporter, periplasmic arginine-binding protein artI [Yersinia pseudotuberculosis IP 32953] gi|108806635|ref|YP_650551.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis Antiqua] gi|108812793|ref|YP_648560.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis Nepal516] gi|145599619|ref|YP_001163695.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis Pestoides F] gi|149366608|ref|ZP_01888642.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis CA88-4125] gi|153950797|ref|YP_001401591.1| arginine ABC transporter periplasmic protein [Yersinia pseudotuberculosis IP 31758] gi|162419947|ref|YP_001606088.1| arginine ABC transporter periplasmic substrate-binding protein ArtI [Yersinia pestis Angola] gi|165924719|ref|ZP_02220551.1| arginine ABC transporter, periplasmic substrate-binding protein ArtI [Yersinia pestis biovar Orientalis str. F1991016] gi|165938940|ref|ZP_02227493.1| arginine ABC transporter, periplasmic substrate-binding protein ArtI [Yersinia pestis biovar Orientalis str. IP275] gi|166009784|ref|ZP_02230682.1| arginine ABC transporter, periplasmic substrate-binding protein ArtI [Yersinia pestis biovar Antiqua str. E1979001] gi|166211357|ref|ZP_02237392.1| arginine ABC transporter, periplasmic substrate-binding protein ArtI [Yersinia pestis biovar Antiqua str. B42003004] gi|167400130|ref|ZP_02305648.1| arginine ABC transporter, periplasmic substrate-binding protein ArtI [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419732|ref|ZP_02311485.1| arginine ABC transporter, periplasmic substrate-binding protein ArtI [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424104|ref|ZP_02315857.1| arginine ABC transporter, periplasmic substrate-binding protein ArtI [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170024936|ref|YP_001721441.1| cationic amino acid ABC transporter periplasmic binding protein [Yersinia pseudotuberculosis YPIII] gi|186894793|ref|YP_001871905.1| cationic amino acid ABC transporter periplasmic binding protein [Yersinia pseudotuberculosis PB1/+] gi|218928499|ref|YP_002346374.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis CO92] gi|229841313|ref|ZP_04461472.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843416|ref|ZP_04463562.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229895789|ref|ZP_04510959.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis Pestoides A] gi|229903208|ref|ZP_04518321.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis Nepal516] gi|270487000|ref|ZP_06204074.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Yersinia pestis KIM D27] gi|294503343|ref|YP_003567405.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis Z176003] gi|51588999|emb|CAH20617.1| ABC transporter, periplasmic arginine-binding protein artI [Yersinia pseudotuberculosis IP 32953] gi|108776441|gb|ABG18960.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis Nepal516] gi|108778548|gb|ABG12606.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis Antiqua] gi|115347110|emb|CAL20003.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis CO92] gi|145211315|gb|ABP40722.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis Pestoides F] gi|149290982|gb|EDM41057.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis CA88-4125] gi|152962292|gb|ABS49753.1| arginine ABC transporter, periplasmic substrate-binding protein ArtI [Yersinia pseudotuberculosis IP 31758] gi|162352762|gb|ABX86710.1| arginine ABC transporter, periplasmic substrate-binding protein ArtI [Yersinia pestis Angola] gi|165913087|gb|EDR31711.1| arginine ABC transporter, periplasmic substrate-binding protein ArtI [Yersinia pestis biovar Orientalis str. IP275] gi|165923779|gb|EDR40911.1| arginine ABC transporter, periplasmic substrate-binding protein ArtI [Yersinia pestis biovar Orientalis str. F1991016] gi|165991180|gb|EDR43481.1| arginine ABC transporter, periplasmic substrate-binding protein ArtI [Yersinia pestis biovar Antiqua str. E1979001] gi|166207128|gb|EDR51608.1| arginine ABC transporter, periplasmic substrate-binding protein ArtI [Yersinia pestis biovar Antiqua str. B42003004] gi|166962473|gb|EDR58494.1| arginine ABC transporter, periplasmic substrate-binding protein ArtI [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050838|gb|EDR62246.1| arginine ABC transporter, periplasmic substrate-binding protein ArtI [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056953|gb|EDR66716.1| arginine ABC transporter, periplasmic substrate-binding protein ArtI [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751470|gb|ACA68988.1| cationic amino acid ABC transporter, periplasmic binding protein [Yersinia pseudotuberculosis YPIII] gi|186697819|gb|ACC88448.1| cationic amino acid ABC transporter, periplasmic binding protein [Yersinia pseudotuberculosis PB1/+] gi|229678978|gb|EEO75081.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis Nepal516] gi|229689763|gb|EEO81824.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229697679|gb|EEO87726.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700712|gb|EEO88741.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis Pestoides A] gi|262361383|gb|ACY58104.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis D106004] gi|262365080|gb|ACY61637.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis D182038] gi|270335504|gb|EFA46281.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Yersinia pestis KIM D27] gi|294353802|gb|ADE64143.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis Z176003] gi|320015798|gb|ADV99369.1| arginine transporter subunit; periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 243 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 76/214 (35%), Gaps = 12/214 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ F + AN +GFD+D AL + D + +L+ Sbjct: 22 TIRFAAEATYPPFEFIDANNKMQGFDIDLANALCKEMQAD---CTFTNQAFDSLIPSLKF 78 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K+ D + D T R+ + F Y + FI K ++ ++ L G + +Q G+ Sbjct: 79 KRFDAVISGMDITPERQKQVA--FTQPYYDNSALFIAQK-DKVADLAALKGKRVGMQNGS 135 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PS 212 T + L + + + ++ + + R DA GD + + ND+ Sbjct: 136 THQKYL----MEKHPEITAVPYDSYQNAILDLKNGRLDAVFGDTAVVNEWLKQNDQLAAV 191 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + L A+ Q +TE + Sbjct: 192 GDKVTDADYFGTGLGIAVRQSNTELQGKLDAALT 225 >gi|91225415|ref|ZP_01260537.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio alginolyticus 12G01] gi|91189778|gb|EAS76051.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio alginolyticus 12G01] Length = 272 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 85/255 (33%), Gaps = 19/255 (7%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASI--LGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K ++L L I T + + + IK+RG L+ G++T V +A G+ Sbjct: 1 MKLFKATITALLGLAIAMPTIAKEDVATTNVDQIKERGTLRVGMST-FVPWAMRNKQGEL 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GF++D + L+ K++++P AL +K+ D++ T R S + Sbjct: 60 IGFEIDVAKRLAQDSG---LKVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSV 114 Query: 117 AFRPITYFDGQGFIMHKKKGI----SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 F G +K+ S I + G T + F Sbjct: 115 LFTEAYSHSGVQVAANKELASGFSEFSDFDSRRVKIAARRGAFTVQVARETFPKAK---- 170 Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 + F+ + A + + + + +S+ A A+ Sbjct: 171 ILQFDDDVQAFQEVLNGNAHAVIASSPKPEHETVKHSDKL-FLPFSERLSQGNEAFAVRL 229 Query: 233 GDTEWYNIVSWTHYA 247 G+ + + A Sbjct: 230 GEEDKKAFFNKWIEA 244 >gi|225870779|ref|YP_002746726.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus equi subsp. equi 4047] gi|225700183|emb|CAW94346.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus equi subsp. equi 4047] Length = 721 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 66/211 (31%), Gaps = 17/211 (8%) Query: 1 MYKDFFV-SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M + L ++ T+ +A + + +T F ++ +KG Sbjct: 1 MKNTLKAWMLAMLSVVLMTAGIASAETIDIV---------SDTAYAPFEFKDSDQVYKGI 51 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD ++ + I A+QS Q D L T T R+ F Sbjct: 52 DVDIINEVAKRKGWN---INMTFPGFDAAVNAIQSGQADALMAGTTITAARQKV--FHFS 106 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y K I S+L G ++ V+ GT + L Y K++ F+ Sbjct: 107 DPYYDTKIVIATRKANPIKKYSELKGKTVGVKNGTAAQAFLDKYKKSYGY--TVKTFDTG 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + DA D + Sbjct: 165 DLMYNSLATGSIDAVMDDEPVIQYAINQKQD 195 Score = 86.7 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 65/222 (29%), Gaps = 11/222 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 K ++ F +G++ G D+D +A++ I+ A+Q+ Sbjct: 271 VYKIVADSSFAPFEFQIGSGEYVGIDMDLIKAIAKQ---QGFTIEISNPGFDAALNAVQA 327 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 Q D + T R F Y + I S L G + + GT Sbjct: 328 GQADAVIAGMSITPAR--REIFDFSDSYYTSNIRLGVKSGSSIKSYKDLKGKIVGAKKGT 385 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + L + F+ + + + D D L+ R + Sbjct: 386 ASYDFLESNKDIYGY--RLKAFDEASSMYDSLNSGSIDGLMDDE---AILRYAIQRGHKL 440 Query: 215 VILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEELG 255 I A+ +G + E + + A+ + + Sbjct: 441 DIPIKGEPSGEYGFAVKKGANPELIEMFNNGLAALKASGKYD 482 >gi|322376796|ref|ZP_08051289.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus sp. M334] gi|321282603|gb|EFX59610.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus sp. M334] Length = 721 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L L +F I K +K +T F ++ +KG D Sbjct: 1 MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + IQ A+Q+ Q D + T RE Sbjct: 51 VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K IS QL+G ++ V+ GT + L + F+ + Sbjct: 106 TYYDTKVVIATTKAHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTSD 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + A DA D + Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193 Score = 94.4 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 66/225 (29%), Gaps = 16/225 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K S + + L I + ++ F +N + G D+ Sbjct: 241 KKWTASSSSAVPTTTTLAG------LKAIPVKAKYIIASDSSFAPFVFQNSNNQYTGIDM 294 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + +A++ + I+ A+Q+ Q D + T R+ + F Sbjct: 295 ELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT--FDFSES 349 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 Y + + I+S L G ++ V+ GT ++ L + + K F Sbjct: 350 YYTANTILGVKESSTIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKTFADGSS 407 Query: 182 IDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223 + + DA D + P + + Sbjct: 408 MYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPIAGTPIGETAFA 452 >gi|90962512|ref|YP_536428.1| amino acid ABC transporter [Lactobacillus salivarius UCC118] gi|90821706|gb|ABE00345.1| Amino acid ABC transporter [Lactobacillus salivarius UCC118] Length = 499 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 83/269 (30%), Gaps = 33/269 (12%) Query: 1 MY--KDFFVSILCLIILFFTSFS----------------TNASILGDIKKRGFLKCGINT 42 M K + + L+++ + T L +K++G L G++ Sbjct: 1 MKIFKKILMLLAVLMMVVTPFAAITADTTSSSSSADTAKTTDDSLKKVKEKGTLVVGLSA 60 Query: 43 GLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 + ++ G D+ + + + + +N +AL++ +ID Sbjct: 61 DYPPYEFTTKQDGKTEYVGIDIQIAKKFAKDLGVK---LVIKNMNFDSLLVALETGKIDT 117 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTE 157 + + T R + F I Y G+ +++K K +S G ++ Q GT Sbjct: 118 IISAMNPTEERRK--SVDFSNIYYSGGKYIVINKKDKSKYTSKESFKGQTVGAQNGTLEY 175 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 + F ++ + A ++ + + A N Sbjct: 176 NLIKQQFP----GATVKGLAKLNNLIIALQSGKVSGVLMEEPTAKAYVQNNPNLYAFNSK 231 Query: 218 PDIISKSP-LAPAIIQGDTEWYNIVSWTH 245 + A A +G T + T Sbjct: 232 VSVDVNETGAAMAFPKGATALTQAANKTI 260 >gi|312865954|ref|ZP_07726175.1| lysine-arginine-ornithine-binding periplasmic protein [Streptococcus downei F0415] gi|311098358|gb|EFQ56581.1| lysine-arginine-ornithine-binding periplasmic protein [Streptococcus downei F0415] Length = 731 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 91/298 (30%), Gaps = 34/298 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L ++ FF + + +T F ++ +KG D Sbjct: 1 MKKKLLALMLSVLSAFFIFSG-------KAQAAEKISIVSDTAYAPFEFKDSDQTYKGID 53 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ D + A+QS Q L T T R+ F Sbjct: 54 VDIIKEVAKRSGWDYKQ---TYPGFDAAVNAVQSGQASGLMAGTTVTDARKKV--FDFSD 108 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y ++S QL G ++ V+ GT + L + + F+ Sbjct: 109 TYYDTSIVVYTKSGTTSVTSYDQLKGKTVGVKNGTAAQDWLDQHADQYGYS--VKTFDTS 166 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + ++ + DA D + ++ + + S A + +G Y Sbjct: 167 DLMNNSLDQGAVDAAMDDKPVVQYAIQQGK---QYDMSMEGESVGSFAFGVKKGGKNEYL 223 Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLG---IDKSSNIGEALGLTKD 294 I + T + ++++LG + S +L LT D Sbjct: 224 I-------------KDFNKALAAMKKDGTYDKIMKKWLGDSVNENSKTPSASLHLTGD 268 Score = 94.4 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 13/227 (5%) Query: 30 IKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERF 89 +K + ++ F ++G + G DV+ +A++ K++ Sbjct: 276 VKDSYTIVL--DSSFAPFEFQNSSGGYTGIDVELIKAIAKE---QGFKVKLQYPGFDAAL 330 Query: 90 LALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASIC 149 A+QS Q D + T R+ + F Y + +S + L G ++ Sbjct: 331 NAVQSSQADGVIAGMTITDERKAT--FDFSDPYYSANTILAVPADSKVSKYADLKGKTVG 388 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + GT + L +A Y ++ + + + DA D LK Sbjct: 389 AKKGTASYDWLTQ--RAGQYGYTVRAYDDGSTLYDSLQNGSVDAMMDDE---AVLKYAIK 443 Query: 210 RPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255 + + + A+ + + E + + ++V + + Sbjct: 444 QGRKFKTPIKGEKSGDVGFAVKKGSNPELVQMFNNGLASLVKSGKYD 490 >gi|307706697|ref|ZP_07643503.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] gi|307617941|gb|EFN97102.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] Length = 721 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 65/210 (30%), Gaps = 17/210 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L L +F I K +K +T F ++ +KG D Sbjct: 1 MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + IQ A+Q+ Q D + T RE Sbjct: 51 VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K IS QL G ++ V+ GT + L + F+ + Sbjct: 106 TYYDTKVVIATTKSHKISQYDQLKGKTVGVKNGTAAQRFLETI--KDKYSFTIKTFDTSD 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + A DA D + Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193 Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 36/232 (15%), Positives = 72/232 (31%), Gaps = 19/232 (8%) Query: 1 MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +T A L I + ++ F ++ Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G D++ +A++ + I+ + A+Q+ Q D + T R+ + Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEIINPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y + + I+S L G ++ V+ GT ++ L + + K Sbjct: 344 FDFSESYYTANTILGVKESSTIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 F + + DA D L + L I +P+ Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQK------LKTPIPGTPIG 447 >gi|116629207|ref|YP_814379.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus gasseri ATCC 33323] gi|116094789|gb|ABJ59941.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus gasseri ATCC 33323] Length = 501 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 77/228 (33%), Gaps = 12/228 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWKGFDVDFCRALSSAIFDDPSKI 78 S+L IKK G L G + + G D++ + ++ + + Sbjct: 39 AEGSVLKKIKKSGELVVGTSADYPPLEFTASENGKTKYVGVDIELAKDIAQDLGVK---L 95 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGI 137 ++ +AL++ ++D++ T R+ S+ + + K Sbjct: 96 VIKNMSFDSLLVALETGKVDMVISAMTPTPERKQSVAFSKIYYKPSGEYFLVNKKDKDKY 155 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +S+ L G +I Q G+ + K ++ + A ++ + A + Sbjct: 156 TSIQSLKGQAIGAQTGSNQYNLVKSQMK----DSKLKGLGKINNLVLALQSGKVSAVVVE 211 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + N+ V ++S A AI +G E V+ T Sbjct: 212 E-LIAKAYAENNNSLAAVRSNLKETQSGNAVAIAKGQDELVAQVNKTI 258 >gi|320334229|ref|YP_004170940.1| ABC transporter periplasmic subunit [Deinococcus maricopensis DSM 21211] gi|319755518|gb|ADV67275.1| ABC-type transporter, periplasmic subunit family 3 [Deinococcus maricopensis DSM 21211] Length = 252 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 88/246 (35%), Gaps = 17/246 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M F L +L + S A L I+K G L+ V + + NG ++GF+ Sbjct: 1 MKHLRF----ALPVLLLATSSALALPLTSIQKAGVLRLATAGDNVPYTS-EVNGKFEGFE 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +++ + P Q+ ++ L + D+ + T RE + F Sbjct: 56 VDLANLIAAELGVKP---QWERVSRDRLLGGLADDRFDLAVSSLGITSTRE--NKVDFTQ 110 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y I I + L G ++ V AG+ L Y + +V+ + Sbjct: 111 PMYCASVVIISR-DAAIQKHTDLEGKTVGVPAGS----LLQSYIQKLPFPKKTLVYGSGK 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 EI A + DA + L L P + + ++ P A+ + +T + Sbjct: 166 EIVTAMLSGAIDA--APVYRLAGLAALKAYPKANFHVGPVLWSVPTGIALAEDNTALRDA 223 Query: 241 VSWTHY 246 V+ Sbjct: 224 VNVALT 229 >gi|115359642|ref|YP_776780.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115284930|gb|ABI90446.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 267 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 85/254 (33%), Gaps = 22/254 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + L SF+ + ++ GI+ F + +G GFD Sbjct: 1 MNRTAKLVVSVLAFAPLVSFA---------QDTAMIRWGIDPTYPPFEAKQPDGSLAGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A+ + +K ++ AL++++ D++ T R + F Sbjct: 52 IDLRDAICEQL---RAKCVWVEQGFDGMIPALRARKFDVIMSAMTATDER--LKQIDFSN 106 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + + + + L+G + + GTT E + + ++ Sbjct: 107 KLYASPGALVAPAGSKLLPTAASLAGKRVGIDQGTTQEAYAKAEWATKG--VTIVSYQNQ 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGD 234 +++ R DA D + L R + ++ + A + +GD Sbjct: 165 DQVYQDLVNGRLDATFQDKTQAGYSFLKTPRGKGYAFAGPDVTDVRITGYGVAMGVRKGD 224 Query: 235 TEWYNIVSWTHYAM 248 + ++ A+ Sbjct: 225 ADMKKRLNDAIAAI 238 >gi|227891436|ref|ZP_04009241.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus salivarius ATCC 11741] gi|227866583|gb|EEJ74004.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus salivarius ATCC 11741] Length = 501 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 83/269 (30%), Gaps = 33/269 (12%) Query: 1 MY--KDFFVSILCLIILFFTSFS----------------TNASILGDIKKRGFLKCGINT 42 M K + + L+++ + T L +K++G L G++ Sbjct: 3 MKIFKKILMLLAVLMMVVTPFAAITADTTSSSSSADTAKTTDDSLKKVKEKGTLVVGLSA 62 Query: 43 GLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 + ++ G D+ + + + + +N +AL++ +ID Sbjct: 63 DYPPYEFTTKQDGKTEYVGIDIQIAKKFAKDLGVK---LVIKNMNFDSLLVALETGKIDT 119 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTE 157 + + T R + F I Y G+ +++K K +S G ++ Q GT Sbjct: 120 IISAMNPTEERRK--SVDFSNIYYSGGKYIVINKKDKSKYTSKESFKGQTVGAQNGTLEY 177 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 + F ++ + A ++ + + A N Sbjct: 178 NLIKQQFP----GATVKGLAKLNNLIIALQSGKVSGVLMEEPTAKAYVQNNPNLYAFNSK 233 Query: 218 PDIISKSP-LAPAIIQGDTEWYNIVSWTH 245 + A A +G T + T Sbjct: 234 VSVDVNETGAAMAFPKGATALTQAANKTI 262 >gi|237729705|ref|ZP_04560186.1| predicted protein [Citrobacter sp. 30_2] gi|226908311|gb|EEH94229.1| predicted protein [Citrobacter sp. 30_2] Length = 350 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 95/260 (36%), Gaps = 11/260 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 K LI+ + +A L I + + G F+ N G+ Sbjct: 49 KRMLTIFALLIVSATPCLAGSALPLHTLEQIASKKSITLGYQDDAFPFSWQNGN-VPAGY 107 Query: 60 DVDFCRALSSAIFD----DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 +D C ++ SA+ K++++ N+ +F+ +++ DI+ ++ R Sbjct: 108 SIDICNSIVSALKTKLQLKNLKVEWVKANSASQFVLIKNHMADIMCIPAFYSKSRHSI-- 165 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F YF F+M K + ++++LSG S+ V++GT L A+++ + + Sbjct: 166 SEFSLPFYFSSTRFVMRKNESNDNLAELSGHSVLVKSGTIYVEQLQKVNAANDLDINIQL 225 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP-DIISKSPLAPAIIQGD 234 + A L + P ++ + + + P + D Sbjct: 226 DTNNITAFNELKNGEYSALISSTVLLKGMIAQTPNPGDYKLSDIALSAPLPAGLLLPLHD 285 Query: 235 TEWYNIVSWTHYAMVTAEEL 254 E+ V T +++ + E Sbjct: 286 KEFKEFVDGTLSSLMASNEF 305 >gi|148993850|ref|ZP_01823252.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP9-BS68] gi|168489068|ref|ZP_02713267.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP195] gi|147927675|gb|EDK78700.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP9-BS68] gi|183572432|gb|EDT92960.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP195] gi|332073579|gb|EGI84058.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17570] Length = 721 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L L +F I K +K +T F ++ +KG D Sbjct: 1 MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + IQ A+Q+ Q D + T RE Sbjct: 51 VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K IS QL+G ++ V+ GT + L + F+ + Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + A DA D + Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193 Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%) Query: 1 MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +T A L I + ++ F ++ Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G D++ +A++ + I+ A+Q+ Q D + T R+ + Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y + + I+S L G ++ V+ GT ++ L + + K Sbjct: 344 FDFSESYYTANTILGVKESSNIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401 Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223 F + + DA D + P + + Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPISGTPIGETAFA 452 >gi|15901102|ref|NP_345706.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae TIGR4] gi|111658436|ref|ZP_01409115.1| hypothetical protein SpneT_02000407 [Streptococcus pneumoniae TIGR4] gi|116516932|ref|YP_816569.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae D39] gi|149007101|ref|ZP_01830770.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP18-BS74] gi|149012291|ref|ZP_01833360.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP19-BS75] gi|168493162|ref|ZP_02717305.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC3059-06] gi|225856907|ref|YP_002738418.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae P1031] gi|225859035|ref|YP_002740545.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae 70585] gi|237649941|ref|ZP_04524193.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CCRI 1974] gi|307127172|ref|YP_003879203.1| amino acid ABC transporter amino acid-binding protein/permeae [Streptococcus pneumoniae 670-6B] gi|14972722|gb|AAK75346.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae TIGR4] gi|116077508|gb|ABJ55228.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae D39] gi|147761405|gb|EDK68371.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP18-BS74] gi|147763617|gb|EDK70552.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP19-BS75] gi|183576805|gb|EDT97333.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC3059-06] gi|225721475|gb|ACO17329.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae 70585] gi|225725249|gb|ACO21101.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae P1031] gi|306484234|gb|ADM91103.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae 670-6B] gi|332074571|gb|EGI85045.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17545] Length = 721 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L L +F I K +K +T F ++ +KG D Sbjct: 1 MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + IQ A+Q+ Q D + T RE Sbjct: 51 VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K IS QL+G ++ V+ GT + L + F+ + Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + A DA D + Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193 Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%) Query: 1 MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +T A L I + ++ F ++ Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G D++ +A++ + I+ A+Q+ Q D + T R+ + Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y + + I+S L G ++ V+ GT ++ L + + K Sbjct: 344 FDFSESYYTANTILGVKESSNIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401 Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223 F + + DA D + P + + Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPISGTPIGETAFA 452 >gi|332074851|gb|EGI85323.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA41301] Length = 721 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L L +F I K +K +T F ++ +KG D Sbjct: 1 MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + IQ A+Q+ Q D + T RE Sbjct: 51 VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K IS QL+G ++ V+ GT + L + F+ + Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + A DA D + Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193 Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%) Query: 1 MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +T A L I + ++ F ++ Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G D++ +A++ + I+ A+Q+ Q D + T R+ + Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y + + I+S L G ++ V+ GT ++ L + + K Sbjct: 344 FDFSESYYTANTILGVKESSNIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401 Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223 F + + DA D + P + + Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPISGTPIGETAFA 452 >gi|255323271|ref|ZP_05364406.1| L-cystine-binding protein TcyA [Campylobacter showae RM3277] gi|255299794|gb|EET79076.1| L-cystine-binding protein TcyA [Campylobacter showae RM3277] Length = 250 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 84/271 (30%), Gaps = 26/271 (9%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + IL L + + IK+ G L F+ + KG+DVD R Sbjct: 5 LLKILALSAFLTLNLNA-----KTIKE-GVLTIATEGTYAPFSYYDDKNELKGYDVDIAR 58 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 ++ + KI++L A + + D + T R+ + Sbjct: 59 EVAKKL---NLKIEFLTAPWDAMLAAFDAGKADAVFNQVSVTDERKK--KYDYAQPYTVV 113 Query: 126 GQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 I HK I S + G + T+ +A + A N + + + Sbjct: 114 HGAIITHKDNNDIKSFDDIKGKKNA-DSATSNWAKVAASYGAQN-----VTVDSFSKSME 167 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 + R D D Y I + AP + +G+TE +S Sbjct: 168 LLVSKRVDTVVRDNIVFYDFIKQRPGAPV-KIAAEGSDTDYTAPIVQKGNTELAEQISKA 226 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQR 275 EEL + + ++S DV R Sbjct: 227 I------EELK-NEGKLAEISIRYFGKDVSR 250 >gi|283786455|ref|YP_003366320.1| putative periplasmic solute-binding protein of ABC transporter [Citrobacter rodentium ICC168] gi|282949909|emb|CBG89534.1| putative periplasmic solute-binding protein of ABC transporter [Citrobacter rodentium ICC168] Length = 255 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 31/250 (12%), Positives = 81/250 (32%), Gaps = 17/250 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+ + + ++ L + + G F + +GFD Sbjct: 1 MFSKWMKAGCLMMALTGAAMAAQE----------TYVVGAGGTYRPFEFENSQKQLEGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ A + +++ + + F L S DI+ T R+ + F Sbjct: 51 IDIIKAIAKA---ENFEVKLVNTPWEGIFATLGSGDRDIIISGITITDKRKQM--VDFSH 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q ++ ++S+ L + V +T ++ ++ + F+ Sbjct: 106 PYFPAEQSIVVPAGSTVTSLDSLKNEKVGVVNSSTGDIVVSGVLGKN--STAIKRFDNTP 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A GD+ + + ++ + A+ +G+TE Sbjct: 164 LMLQELFEDGVSAAVGDVGVVKYYIRQHPEKQFKLVPDAKFERQYFGIAVAKGNTELLQK 223 Query: 241 VSWTHYAMVT 250 ++ ++ Sbjct: 224 INAGLKKIIA 233 >gi|330830032|ref|YP_004392984.1| amino acid ABC transporter periplasmic amino acid-binding protein [Aeromonas veronii B565] gi|328805168|gb|AEB50367.1| ABC-type amino acid transporter, periplasmic amino acid-binding protein [Aeromonas veronii B565] Length = 273 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 79/233 (33%), Gaps = 15/233 (6%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + + + I++ G L+ G++T +A G GF++D R L++ + ++ Sbjct: 25 AQTAPSDTQAQIEQSGTLRVGMST-FAPWAMRDKQGALIGFEIDVARRLATD---NGWQV 80 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI----MHKK 134 +++P +L +K+ D++ T RE + F G M K+ Sbjct: 81 EFVPTAWDGIIPSLLAKKYDVIIGGLTITPEREK--SVRFTQAYSHSGVQLAASSTMAKE 138 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 K + G + V+ G + ++F F+ ++ R Sbjct: 139 KKTVADFNQRGVILAVRRGASPVQVAKEHFPKA----TLRQFDDESQVFQEVLNGRAHGA 194 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 L + + + +++ A+ +GD + A Sbjct: 195 LSSSPKPEQEALRHPDAL-FMPFAEPLAQGDEGFALRKGDDALAEQFNEWIAA 246 >gi|261823416|ref|YP_003261522.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] gi|261607429|gb|ACX89915.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] Length = 269 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 89/266 (33%), Gaps = 23/266 (8%) Query: 1 MYKDFFV----SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M FF+ +L I + N + + L+ G + NG Sbjct: 1 MQTRFFIKPKTLLLAAGIAVVVAGCDNTTTTDQPQ---VLRIGTTGQSFPGSYK-ENGKL 56 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G+DV+ +++ + +++ + L++ ++D ++ N T R+ Sbjct: 57 VGYDVEVAEKIANELGYK---VEWTTSDFSGLLGQLEAGKLDTIANNFVQTEARQK--KY 111 Query: 117 AFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + K I S+S L G +I G+T L + F +N+ Sbjct: 112 NFSKDYLTYASQVVTSIKNDDIQSLSDLDGKTIAGVLGSTHVTNLRNAFPKNNI--TIRT 169 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTND-------RPSEHVILPDIISKSPLAP 228 +E + ++R Y L A + P H I+ +K+P Sbjct: 170 YETRDGAVNDVISNRVQGYVNSRPILLAEINKHKLPLKLVGEPLSHEIVSFPFAKNPKGD 229 Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEEL 254 ++ E + + H AE+ Sbjct: 230 TLLAAFNEKLDTLRSNHQLNELAEKY 255 >gi|229492748|ref|ZP_04386549.1| ABC transporter, substrate-binding component [Rhodococcus erythropolis SK121] gi|229320407|gb|EEN86227.1| ABC transporter, substrate-binding component [Rhodococcus erythropolis SK121] Length = 284 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 67/210 (31%), Gaps = 14/210 (6%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 ++++ G L+ G+N NG GFDVD A+++ + + Y + + Sbjct: 40 NVRESGKLQVGVNIPYAPNEFKDENGKIVGFDVDIMNAVATVLGVEA---VYNQADFDKI 96 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 A+QS D+ + + RE + F Q + + G + Sbjct: 97 IPAIQSGSYDLGMSSFTDSKEREK--SVDFVTYYSAGIQ--WAQRPDNPVDPNNACGLRV 152 Query: 149 CVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203 VQ TT + A I ++ ++ A R DA + D Sbjct: 153 AVQTTTTEDIDEVPAKSEACVAAGKPPIEKIKYDSQDDAANALILGRVDALSADSPVTGY 212 Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 + +P I++G Sbjct: 213 AIKRSK--GRMEAAGQPFDSAPYGWPIVKG 240 >gi|239820510|ref|YP_002947695.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] gi|239805363|gb|ACS22429.1| extracellular solute-binding protein family 3 [Variovorax paradoxus S110] Length = 261 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 80/222 (36%), Gaps = 14/222 (6%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 G + ++ + G +G+DVD RAL + +K + + + Sbjct: 30 AEGSYRIATEGAYPPWSFKDSQGMLQGWDVDIARALCEKM---KAKCEIVAQDWDGIIPG 86 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICV 150 L +++ D++ + T R +AF F+ K S + L G SI V Sbjct: 87 LVARKYDMIVASMAITPQR--RERVAFSAKYKDTISRFVARKGMPPDVSPAALKGKSIGV 144 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q G+ LA ++A N+K+ ++ + + A R + G++ + L Sbjct: 145 QRGSVQAAYLAQNYQAANLKF----YDTPQAAELDLVAGRVEYILGNMVTYHVGFLKTPE 200 Query: 211 PSEH----VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + L I A+ + D + ++ A+ Sbjct: 201 AKDFAFVGPELKGGILGEGNGIAVRKDDGQTLARINAALEAI 242 >gi|123441653|ref|YP_001008374.1| histidine-binding periplasmic protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332162411|ref|YP_004298988.1| histidine-binding periplasmic protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|122088614|emb|CAL11409.1| histidine-binding periplasmic protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318606496|emb|CBY27994.1| histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ [Yersinia enterocolitica subsp. palearctica Y11] gi|325666641|gb|ADZ43285.1| histidine-binding periplasmic protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863723|emb|CBX73824.1| histidine-binding periplasmic protein [Yersinia enterocolitica W22703] Length = 260 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 86/244 (35%), Gaps = 20/244 (8%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 +K G + F A+G+ GFD+D + L + I +K ++ + +L++K Sbjct: 28 IKIGTDPTYAPFESKNASGELVGFDIDIAKELCNRI---DTKCTFVESDFDALIPSLKAK 84 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGT 154 +ID + + T R+ + F Y I K I ++ L G + V G+ Sbjct: 85 KIDAIISSLSITEKRQKEIA--FTDKLYAANARLIAPKDSKIEPTLVALKGKRVGVLQGS 142 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T E ++ + + ++ + I + + R DA D A L + + Sbjct: 143 TQEAFANAEWQPKGID--VVAYQNQDLIYSDLSSGRIDAAFQDEVAGSEGFLKQEAGKGY 200 Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269 + + + D E A+ A ++++K Sbjct: 201 AFAGPSVKNDEFFGVGTGMGLRKDDAELKA-------ALDKAFAEMRKDGTYDKLAKKYF 253 Query: 270 NPDV 273 + DV Sbjct: 254 DFDV 257 >gi|298254350|ref|ZP_06977936.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae str. Canada MDR_19A] Length = 721 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L L +F I K +K +T F ++ +KG D Sbjct: 1 MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + IQ A+Q+ Q D + T RE Sbjct: 51 VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K IS QL+G ++ V+ GT + L + F+ + Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + A DA D + Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193 Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%) Query: 1 MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +T A L I + ++ F ++ Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G D++ +A++ + I+ A+Q+ Q D + T R+ + Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y + + I+S L G ++ V+ GT ++ L + + K Sbjct: 344 FDFSESYYTANTILGVKESSNIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401 Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223 F + + DA D + P + + Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPISGTPIGETAFA 452 >gi|209547421|ref|YP_002279339.1| family 3 extracellular solute-binding protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538665|gb|ACI58599.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 275 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 80/246 (32%), Gaps = 9/246 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 IL ++ +T A ++ + G + G + A+G + GFD++ Sbjct: 14 LRAGILTCLLAMGAGSATAADNPYNLIEAGVISVGTMGDSKPYTFATADGQFTGFDIELF 73 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + S + K+ + ++ +++ D+ T R+ + + F Sbjct: 74 LNVVSRLGFAKDKVTFTGQEFSALLPSVANERFDVAVAAIGTTEARKKT--VDFSDGYLA 131 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + GI L G + V GT E+ A F + F A Sbjct: 132 GYLSVLT-ADAGIKDADGLKGKRLGVVQGTLQEVYAAKNFG----GTDLVKFPDNNSAVA 186 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A DA+ D A + P+ V + +P I +G+ + ++ Sbjct: 187 ALNNGTVDAHFLDYE--AAKQYGERYPALKVAVNIPSFDAPAGFVIRKGNDAFRTALNGA 244 Query: 245 HYAMVT 250 + + Sbjct: 245 LHDAMQ 250 >gi|167765668|ref|ZP_02437721.1| hypothetical protein CLOSS21_00156 [Clostridium sp. SS2/1] gi|167712643|gb|EDS23222.1| hypothetical protein CLOSS21_00156 [Clostridium sp. SS2/1] Length = 312 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 85/252 (33%), Gaps = 27/252 (10%) Query: 1 MYKDFFVSILCLIILFFTSF-----------STNASILGDIKKRGF-----LKCGINTGL 44 M K ++ +I + A ++ K G LK G++ + Sbjct: 37 MKKILASLMMVGLIFCLGGCNVPWMKQKTEKTKAAKVIQADKVEGTMKGMKLKVGVSNDM 96 Query: 45 VGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F+ + GFD+D LS + + +N K+ +++K++D+ Sbjct: 97 APFSYYDSEQKKITGFDIDLLDKLSEYLGFEYELYP---MNMKKLEQKIKNKELDLAIAG 153 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ +F Y ++ K I+ +++ + V GT++ DY Sbjct: 154 ISITDERQR--EFSFTDTYYETYLQIVVRKDSQITDRKEITEKKVGVVEGTSSAQYAEDY 211 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 N ++ + ++ DA D + + + + +L + ++ Sbjct: 212 LSEDN---KITYYKNITKVWNDLEKGTIDATIYDTTGIQNYMQEHADNTNLSVLNEQLNS 268 Query: 224 SP--LAPAIIQG 233 ++G Sbjct: 269 EESNYGIMFVKG 280 >gi|291559904|emb|CBL38704.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SSC/2] Length = 276 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 85/252 (33%), Gaps = 27/252 (10%) Query: 1 MYKDFFVSILCLIILFFTSF-----------STNASILGDIKKRGF-----LKCGINTGL 44 M K ++ +I + A ++ K G LK G++ + Sbjct: 1 MKKILASLMMVGLIFCLGGCNVPWMKQKTEKTKAAKVIQADKVEGTMKGMKLKVGVSNDM 60 Query: 45 VGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F+ + GFD+D LS + + +N K+ +++K++D+ Sbjct: 61 APFSYYDSEQKKITGFDIDLLDKLSEYLGFEYELYP---MNMKKLEQKIKNKELDLAIAG 117 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ +F Y ++ K I+ +++ + V GT++ DY Sbjct: 118 ISITDERQR--EFSFTDTYYETYLQIVVRKDSQITDRKEITEKKVGVVEGTSSAQYAEDY 175 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 N ++ + ++ DA D + + + + +L + ++ Sbjct: 176 LSEDN---KITYYKNITKVWNDLEKGTIDATIYDTTGIQNYMQEHADNTNLSVLNEQLNS 232 Query: 224 SP--LAPAIIQG 233 ++G Sbjct: 233 EESNYGIMFVKG 244 >gi|187478452|ref|YP_786476.1| glutamine ABC transporter periplasmic protein [Bordetella avium 197N] gi|115423038|emb|CAJ49569.1| glutamine ABC transporter, glutamine-binding protein [Bordetella avium 197N] Length = 248 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 81/256 (31%), Gaps = 20/256 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + + + L +T V F + N + GFD Sbjct: 1 MIKTKVAAVLIGFSTAMSGSMA-------VAQDKELIVATDTAFVPFEFKQGN-TYTGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + K + P++ LQ+K ID + + F Sbjct: 53 IDLWSAIAKEL---KLKYKLQPMDFNGIIPGLQTKNIDAALAGITI--RDDRKKVIDFSD 107 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I + LSG ++ V+ GT T DY K+ +F + Sbjct: 108 PYYESGLAILVADNNNSIKNAKDLSGKTVAVKTGTATV----DYLKSQVPDAKLKLFPNI 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + T + ++ + S A +G Sbjct: 164 DNAYLELATGRVDAAVHDTPNVQYYANTAGKGRV-KVVGTVKSGDYYGIAFPKGSP-MVA 221 Query: 240 IVSWTHYAMVTAEELG 255 V+ + E Sbjct: 222 EVNKALATLKANGEYE 237 >gi|148989263|ref|ZP_01820643.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP6-BS73] gi|147925241|gb|EDK76320.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP6-BS73] Length = 721 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L L +F I K +K +T F ++ +KG D Sbjct: 1 MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + IQ A+Q+ Q D + T RE Sbjct: 51 VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K IS QL+G ++ V+ GT + L + F+ + Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + A DA D + Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193 Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%) Query: 1 MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +T A L I + ++ F ++ Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G D++ +A++ + I+ A+Q+ Q D + T R+ + Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y + + I+S L G ++ V+ GT ++ L + + K Sbjct: 344 FDFSESYYTANTILGVKESSNIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401 Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223 F + + DA D + P + + Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPISGTPIGETAFA 452 >gi|169834415|ref|YP_001694671.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae Hungary19A-6] gi|168996917|gb|ACA37529.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae Hungary19A-6] Length = 721 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L L +F I K +K +T F ++ +KG D Sbjct: 1 MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + IQ A+Q+ Q D + T RE Sbjct: 51 VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K IS QL+G ++ V+ GT + L + F+ + Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + A DA D + Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193 Score = 96.3 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%) Query: 1 MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +T A L I + ++ F ++ Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G D++ +A++ + I+ A+Q+ Q D + T R+ + Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y + + I+S L G ++ V+ GT ++ L + + K Sbjct: 344 FDFSESYYTANTILGVKESSTIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401 Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223 F + + DA D + P + + Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPIAGTPIGETAFA 452 >gi|148985136|ref|ZP_01818375.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP3-BS71] gi|148998673|ref|ZP_01826112.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP11-BS70] gi|149019232|ref|ZP_01834594.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP23-BS72] gi|168486561|ref|ZP_02711069.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC1087-00] gi|168575696|ref|ZP_02721611.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae MLV-016] gi|221231935|ref|YP_002511087.1| putative glutamine ABC transporter,glutamine-binding protein/permease protein [Streptococcus pneumoniae ATCC 700669] gi|225854706|ref|YP_002736218.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae JJA] gi|225860926|ref|YP_002742435.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae Taiwan19F-14] gi|298229894|ref|ZP_06963575.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298502762|ref|YP_003724702.1| amino acid ABC superfamily transporter ATP-binding protein/permease [Streptococcus pneumoniae TCH8431/19A] gi|307067889|ref|YP_003876855.1| amino acid ABC transporter/signal transduction system periplasmic domain-containing protein [Streptococcus pneumoniae AP200] gi|147755510|gb|EDK62558.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP11-BS70] gi|147922581|gb|EDK73699.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP3-BS71] gi|147931102|gb|EDK82081.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP23-BS72] gi|183570457|gb|EDT90985.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC1087-00] gi|183578152|gb|EDT98680.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae MLV-016] gi|220674395|emb|CAR68945.1| putative glutamine ABC transporter,glutamine-binding protein/permease protein [Streptococcus pneumoniae ATCC 700669] gi|225723631|gb|ACO19484.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae JJA] gi|225727804|gb|ACO23655.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae Taiwan19F-14] gi|298238357|gb|ADI69488.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein/permease protein [Streptococcus pneumoniae TCH8431/19A] gi|301794323|emb|CBW36748.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pneumoniae INV104] gi|301800161|emb|CBW32766.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pneumoniae OXC141] gi|306409426|gb|ADM84853.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Streptococcus pneumoniae AP200] gi|327389476|gb|EGE87821.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA04375] Length = 721 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L L +F I K +K +T F ++ +KG D Sbjct: 1 MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + IQ A+Q+ Q D + T RE Sbjct: 51 VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K IS QL+G ++ V+ GT + L + F+ + Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + A DA D + Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193 Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%) Query: 1 MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +T A L I + ++ F ++ Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G D++ +A++ + I+ A+Q+ Q D + T R+ + Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y + + I+S L G ++ V+ GT ++ L + + K Sbjct: 344 FDFSESYYTANTILGVKESSNIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401 Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223 F + + DA D + P + + Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPISGTPIGETAFA 452 >gi|186474515|ref|YP_001863486.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184198474|gb|ACC76436.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 255 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 78/246 (31%), Gaps = 24/246 (9%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 ++ ++ ++F+T+ L+ GI F +G+ GFD+D Sbjct: 4 LMTAAAFCVMASSAFATD-----------TLRFGIEADYPPFEYKLPSGELTGFDIDIGN 52 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A+ + + K +++ + AL +K+ D ++ T RE + F + Y Sbjct: 53 AVCARM---QVKCKWVENSFDGLIPALMAKKFDAINSGMWDTPQRE--QVIDFTSVIYAT 107 Query: 126 GQGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + I + L G + VQ G ++ + I + + + Sbjct: 108 PMRLVARTDSHILPNAESLKGKRVGVQQGGAQQIYAEQKWAPAG--AVIITYPSQSALFS 165 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYN 239 R DA G L + + + A + + D E Sbjct: 166 DLAGGRIDAALGAQQNAEDGFLKTPEGKGFAFVGPGLLDEKISGRGVAFGVRKQDKELRT 225 Query: 240 IVSWTH 245 ++ Sbjct: 226 RLNEAI 231 >gi|75910090|ref|YP_324386.1| amino acid ABC transporter permease [Anabaena variabilis ATCC 29413] gi|75703815|gb|ABA23491.1| L-arginine ABC transporter membrane protein / L-glutamine ABC transporter membrane protein / L-arginine-binding protein / L-histidine-binding protein / L-histidine ABC transporter membrane protein / L-lysine-binding protein / L-lysine ABC transporter membrane protein / L-glutamine-binding protein [Anabaena variabilis ATCC 29413] Length = 501 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 72/247 (29%), Gaps = 16/247 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++ L + + L + L+ F G+ +GF Sbjct: 1 MSKRVFGRWCLVLSLICLLLTGCSGNLS---QEKTLRIATEPAFPPFEFTGQGGNLQGFS 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++SA ++ + L ALQS+ +D + T R ++ F Sbjct: 58 IDLMNAIASAA---NLRVSFQSLPFDGIIPALQSRTVDAAISSITITAERAKTVA--FSR 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + + L I VQ GTT A F+ Sbjct: 113 PYFKAGLAIAIRSSDEDITGFDSLKNKKIAVQIGTTGAEKAKSIPGA-----QIRSFDSA 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 DA D + ++ ++++ A Q + Sbjct: 168 PLALQELLNSNVDAVINDAPVTL-YAINTGNLQGIKVVEKLLTEEYYGIATAQNSP-YLA 225 Query: 240 IVSWTHY 246 +++ Sbjct: 226 LINDGLN 232 >gi|172057734|ref|YP_001814194.1| extracellular solute-binding protein [Exiguobacterium sibiricum 255-15] gi|171990255|gb|ACB61177.1| extracellular solute-binding protein family 3 [Exiguobacterium sibiricum 255-15] Length = 280 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 81/283 (28%), Gaps = 13/283 (4%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNASIL---GDIKKRGFLKCGINTGLVGFAEVKAN-G 54 M + ++ L ++ + IKK G L L + + Sbjct: 1 MKNSVKWTGLLIAGTALVLSACGQEEKQMTAYDKIKKEGTLTVATAGTLYPTSFHEEKSN 60 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GFDV+ + ++ + K+ + ++ ++ + Q+D+ + + T R+ Sbjct: 61 KLTGFDVEVVKEIAKRL---DLKVAFKEMSFDGMLTSVNTGQVDLAANDITITEERKGKF 117 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 + + GI S+ L G +A TT K + K Sbjct: 118 AFSKPYKYTYGTAIVRKSDLSGIKSLEDLKGKKAAGEATTTYMQV----AKKYGAKEVTY 173 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 ++ R D D + + S + + + Sbjct: 174 DNATNDQYLRDVSNGRTDVILNDYYLQSLAVDFFKDFDITIHPDIAYNPSQVGLIMDLDN 233 Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277 E + ++ M L K + PDV+ L Sbjct: 234 KELQSNINAEIDEMKEDGTLAKLSKTFYANKDVSKMPDVKTTL 276 >gi|317012749|gb|ADU83357.1| putative polar amino acid transport system substrate-binding protein [Helicobacter pylori Lithuania75] Length = 258 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 32/251 (12%), Positives = 75/251 (29%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ +L + FF F +S+ + + + G F G G+D Sbjct: 1 MKKVSFLFLLVIS--FFGGFLNASSLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R L+ + I++ + L+S + D+++ T ++ Sbjct: 59 VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQATFDKSL 114 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G ++ K I + + G +T A + + + Sbjct: 115 PYSYSGTIMLVRKDENRIKDIKDIKGLKAANTLSSTYGEI------AFKYDAQIVSVDSM 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R D A+ T+ + + I + + Sbjct: 169 AQALLLVAQKRADLTLNSSLAILNYLNTHKNSPFKIAWESKEKDGGASFVINKHQEKALE 228 Query: 240 IVSWTHYAMVT 250 +++ ++ Sbjct: 229 LINQAMQRLIN 239 >gi|290967793|ref|ZP_06559346.1| putative glutamine ABC transporter periplasmic protein [Megasphaera genomosp. type_1 str. 28L] gi|290782152|gb|EFD94727.1| putative glutamine ABC transporter periplasmic protein [Megasphaera genomosp. type_1 str. 28L] Length = 274 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 80/248 (32%), Gaps = 14/248 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF-LKCGINTGLVGFAEVKANG--DWK 57 M S+L + +L S K L+ N V F ++K Sbjct: 1 MNLKKATSLLAITLLSVGVLSGCGHTPQAQKDTTKPLQVCTNATFVPFEFKDDANATEYK 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 GF++D +A+S + + + ALQ +D+ + TL E + +A Sbjct: 61 GFEMDLLQAVSKEMG---QPVALNNVPFAGIIPALQQGTMDLGASG--ITLSPERAEKVA 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F Y ++ I S+ L ++ VQ GTT ADY + + F+ Sbjct: 116 FSAPFYESKLVLMVPASGSIHSIQDLKNKTVAVQMGTTA----ADYCDSKKLATK--QFD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E+ + A D + +I LA A+ + + + Sbjct: 170 HNSEVIMELQVGGSPAGILDKPVADYYLTKEGKGKFKIIDLPDAKGEYLAFAMNKNNPQL 229 Query: 238 YNIVSWTH 245 + Sbjct: 230 QKDIDAAL 237 >gi|288959825|ref|YP_003450165.1| polar amino acid transport system substrate-binding protein [Azospirillum sp. B510] gi|288912133|dbj|BAI73621.1| polar amino acid transport system substrate-binding protein [Azospirillum sp. B510] Length = 277 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 70/199 (35%), Gaps = 13/199 (6%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L IK+RG L G+ F + A + KGF++D L+ + + + Sbjct: 30 TLDRIKQRGSLVAGVILSGAPFGYIDAKSQEQKGFNIDLATELARGLGVKLETVT---VT 86 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-IMHKKKGISSVSQL 143 R LQ ++D+L N WT R L F P + G + K + L Sbjct: 87 PPNRVQFLQQGKVDLLIANMSWTEERAEM--LDFVPTAFERSGGIALGRKGTPVKDWPDL 144 Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT-GDISALY 202 G ++C+ G LA+ A F + A + +CDA + Sbjct: 145 KGKTVCLSQGANFTKPLAEEIGAK-----IKGFPSQPDSLLALKGGQCDAAVHTGATLRV 199 Query: 203 ALKLTNDRPSEHVILPDII 221 L + ++ IL Sbjct: 200 MLLDHPEDWKDYEILTPTD 218 >gi|288905601|ref|YP_003430823.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus gallolyticus UCN34] gi|288732327|emb|CBI13897.1| putative amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus gallolyticus UCN34] Length = 741 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 81/242 (33%), Gaps = 15/242 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L T ++ + +K + +++ F +G+++G DV+ +A++ + Sbjct: 269 LTLTGDASAKATP--VKSTYKIV--MDSSFAPFEYQNDSGEYEGIDVELIKAIAEQQGFN 324 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ A+Q+ Q D + T R+ F Y + Sbjct: 325 ---VEISNPGFDAALNAVQAGQADAVMAGMSITDARKEI--FDFSDAYYTSNILLAVKSG 379 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I S S L G ++ + GT++ L+++ + F+ + + + DA Sbjct: 380 SSIKSYSDLKGLTVGAKNGTSSYTWLSEHADEYGY--TLKAFDEASTMYDSLNSGSIDAL 437 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEE 253 D L + + A+ + + E + + A+V + E Sbjct: 438 MDDE---AVLLYAIQQGRDFETPIAGEKSGEYGFAVSKGSNPELIEMFNNGLAALVESGE 494 Query: 254 LG 255 Sbjct: 495 YD 496 Score = 99.8 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 67/211 (31%), Gaps = 18/211 (8%) Query: 1 MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M +L + +FF A + +T F ++ +KG Sbjct: 1 MKHKLKALMLAIFSVFFVFGVKAQADT---------ISIVSDTAYAPFEFKDSDQTYKGI 51 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD + ++ D ++ A+Q+ Q D L T T R+ F Sbjct: 52 DVDIIKEVAEREGWDYNQ---TYPGFDAAVNAVQAGQADALMAGTTVTDARKKV--FTFS 106 Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y IS SQL G ++ V+ GT + L ++ + F+ Sbjct: 107 DTYYDTSIVIYTKSGNTAISKYSQLKGKTVGVKNGTAAQTWLDEHADKYGY--TVKTFDT 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + ++ + + DA D + Sbjct: 165 SDLMNNSLDSGSIDAAMDDTPVVQYAINQGK 195 >gi|259502414|ref|ZP_05745316.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] gi|259169557|gb|EEW54052.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] Length = 497 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 85/244 (34%), Gaps = 14/244 (5%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE-VKANG--DWKGFDVDFC 64 S L + + + IKKRG L G + VK +G G D+D Sbjct: 22 SALAATPETNSGNADQVESIAAIKKRGKLVIGTAADYPPYEFSVKEHGVNKRVGIDIDLG 81 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + ++ + + +N +AL++ ++D++ T R + F + Y Sbjct: 82 KQIAKDLGVKAE---FKVMNFDSLLVALETHKVDMVIAAMSPTPERAK--SVDFSKVYYG 136 Query: 125 DGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 D Q +++K +S G I Q G+ D K +RV + Sbjct: 137 DSQYIVINKSDKAKYKHLSDFKGHVIGAQNGSEQY----DIAKQQVKGAKLKGLDRVNNL 192 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 A ++H+ D D + A N + + I + A A+ + E V+ Sbjct: 193 IIALQSHKVDGVVMDSTRAKAFVANNAKLTTLDPHFKISGQQGTAVAVAKNSPELVAAVN 252 Query: 243 WTHY 246 T Sbjct: 253 KTIT 256 >gi|220907549|ref|YP_002482860.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC 7425] gi|219864160|gb|ACL44499.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC 7425] Length = 302 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 95/250 (38%), Gaps = 12/250 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 MYK +++L L+ + + +A + + + G + G ++ F+ + + G+ Sbjct: 1 MYKQRAIALLGLLATLGFATAASAETVIEKVTRTGVITMGGRVDIIPFSYLNDKKELVGY 60 Query: 60 DVDFCRALSSAI---FDDPSKIQYLPL-NAKERFLALQSKQIDILSRNTDWTLLREISLG 115 D +++ + P IQ+ + N E +++ QID+ NT +T R S+ Sbjct: 61 SQDVADLIAAEVSAYVGKPVAIQFQQVNNFSELLPKVENGQIDLAC-NTQFTWGR--SMF 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + + G ++ K + L G + V + E + K + + Sbjct: 118 VDYSVPYSLSGIRLLVKKGAIKGTPESLVGKRVGVLPNSLGEAMI----KVVQPQAVLVP 173 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++E A + DA GD + L H+ ++ + + ++ Sbjct: 174 ITGIDEGIDDLIAGKVDAIAGDSNILAGNIQRVSGSDYHLAPDQPFARYAVGCIVPPDNS 233 Query: 236 EWYNIVSWTH 245 ++ ++V+ Sbjct: 234 KFRSLVNIAI 243 >gi|323439640|gb|EGA97359.1| extracellular amino acid binding ABC transporter [Staphylococcus aureus O11] Length = 252 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 25/204 (12%), Positives = 59/204 (28%), Gaps = 10/204 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 ++ + + + ++ K + G F+ +G G+D+D +A++ Sbjct: 1 MIAFVFILAACGNNSSKDKEANKDSKTINVGTEGTYAPFSFHDKDGKLTGYDIDVIKAVA 60 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + K+++ + F L + + D+++ RE F F Sbjct: 61 KE---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYK--FSKPYTFSSAV 115 Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188 ++ + + Q T+ LA A + + + Sbjct: 116 LVIRENEKDIKDFDGVKGKKLAQTFTSNYGKLAKDKGA-----DITKVDGFNQSMDLLLS 170 Query: 189 HRCDAYTGDISALYALKLTNDRPS 212 R D D + K Sbjct: 171 KRVDGTFNDSLSYLDYKKQKPNAK 194 >gi|302344037|ref|YP_003808566.1| extracellular solute-binding protein family 3 [Desulfarculus baarsii DSM 2075] gi|301640650|gb|ADK85972.1| extracellular solute-binding protein family 3 [Desulfarculus baarsii DSM 2075] Length = 269 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 41/247 (16%), Positives = 79/247 (31%), Gaps = 14/247 (5%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + ++ I G L G + NG GFD+D L+ A+ Sbjct: 20 CPAAQAGPVIERIVANGTLTVGTSPSFPPLTAKAKNGMLMGFDIDMANILAGAMGVK--- 76 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG- 136 ++++ L E AL ++D++ R +L F GQ + Sbjct: 77 LRFVTLPFPELLEALNQDKVDVVISGMTVLPKR--NLRAVFVGPYLVGGQTVLGDNALMA 134 Query: 137 -ISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I+ L+ A V A TT++ ++ E E A + Sbjct: 135 AINGRQDLNDAKYKVAAAKGTTSQEAARQMLPKA----QLVIAENEGECLKLLLAKEVNM 190 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253 D + + ++ + PL AI GD ++ N+++ + + Sbjct: 191 VMADYTFCAMAAFKHK-AQNLAVIGKPFTFEPLGMAIKDGDPQFQNLLANFLVTFQGSGQ 249 Query: 254 LGITQKN 260 + Q+ Sbjct: 250 SELLQRR 256 >gi|209547508|ref|YP_002279426.1| family 3 extracellular solute-binding protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538752|gb|ACI58686.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 277 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 36/241 (14%), Positives = 75/241 (31%), Gaps = 21/241 (8%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + ++L + LK + + + + GFD+D + + + +++ Sbjct: 23 ANAGAVLDRVLAAKDLKVATDANWAPQSFMNDKNELDGFDIDVAKDIGRRLGVK---VEF 79 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + + D+ + T R F + Y+ HK + + Sbjct: 80 VTPGWDIITAGNWAGRWDMHVGSMTPTKKRAEI--FDFPAVYYYTPAAVAAHKDSKATKL 137 Query: 141 SQLSGASICVQAGTTTELTL-------ADYFKAHNMKYHPIVFERVE---EIDAAYRAH- 189 + L G + A +T E A A ++ P + R Sbjct: 138 ADLDGKVVGTTATSTFEAYAKGDLTLDAAGAPAFKYEFKPKEVKSYANSTTAFDDLRLGD 197 Query: 190 --RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247 R DA + ++ + D + PLA AI GD E+ + ++ Sbjct: 198 GTRLDAVVSSLP---SILDAVKAGYPIKQIGDPVFYEPLAVAIEHGDQEFNDKIAEAVTG 254 Query: 248 M 248 M Sbjct: 255 M 255 >gi|33152998|ref|NP_874351.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Haemophilus ducreyi 35000HP] gi|33149223|gb|AAP96740.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Haemophilus ducreyi 35000HP] Length = 260 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 79/250 (31%), Gaps = 13/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M K + L I LF + S + +L I +G + F G G+ Sbjct: 1 MLKKIAFATLTAISLFTSMNSLASNDLLSRIDAKGTISVATEGTYPPFTYHDQTGKLTGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ RA++ + + + L++ + D+++ + E Sbjct: 61 DVEVTRAIAEKLGVK---VDFKETQWDAMLAGLKAGRFDLVANQVALS-TPERQAMFDLS 116 Query: 120 PITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + G ++ + + + G + Q+ ++ L A I + Sbjct: 117 DAYSWSGAALVVRADNRHVKQPADVQGIKVA-QSLSSNYGEL-----AVKNGAKVISVDG 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + + + R +A + AL N S +I D + +G+ Sbjct: 171 MAQALLLIQQQRVEATFNNYLALLDYFNKNPTSSLKIIWQDSEQLGA-GLVVNKGNQAAL 229 Query: 239 NIVSWTHYAM 248 ++ A+ Sbjct: 230 AKINQAIMAL 239 >gi|197295013|ref|YP_002153554.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] gi|195944492|emb|CAR57094.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] Length = 260 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 80/221 (36%), Gaps = 13/221 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G KGFD+D AL + + +K ++ + Sbjct: 23 KEWTTIRIGVDPTYPPFESTATDGSVKGFDIDLGNALCAKL---NAKCVWVSSSFDGLIP 79 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149 LQ+++ D++ + T R + F Y + I G + ++L+G + Sbjct: 80 GLQARKFDVILSSMAATEQR--RQQIDFTDRLYRNQTRLIARTGSGLLPDAAKLAGKRVA 137 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ GT E + + A + + ++ A R D D L Sbjct: 138 VEQGTVQETYAREKWAAAK--VEVVPYPSYDQAYADLVTGRVDGVLMDAVQGQLGFLATP 195 Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245 R ++ + + A + + DT+ + ++ Sbjct: 196 RGKGFSFAGGVVYDAKIMGNGDAAGVRKADTDLRDALNRAI 236 >gi|126433388|ref|YP_001069079.1| protein kinase [Mycobacterium sp. JLS] gi|126233188|gb|ABN96588.1| serine/threonine protein kinase with extracellular ligand sensor(s) [Mycobacterium sp. JLS] Length = 604 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 75/244 (30%), Gaps = 14/244 (5%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 S A++ D+++ G L G+N A GD GFDVD +A++ + P Sbjct: 347 GAVPSIAATVPADVRESGRLVIGVNVPYAPNEFRDAYGDIVGFDVDLMKAVARTLGLVPE 406 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 + + ++QS + + TL RE + F G + Sbjct: 407 ---FRETAFESVIPSVQSGAFTLGMSSITDTLEREK--AVDFV-TYLEAGTLWAQRAGSE 460 Query: 137 ISSVSQLSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 + S G + V E A +VF +++ AA A Sbjct: 461 VVDPSNACGLRVGVAYSVIQETDELPAKSEACVAAGREPIRKVVFTEQDDVTAALLAGEV 520 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 DA + D ++ +P + +G + + ++ Sbjct: 521 DAMSADSP--VTGFAIKTSGGALEPAGEVFDSAPYGWPVAKG-SALAESLRQALEHVMAT 577 Query: 252 EELG 255 E Sbjct: 578 GEYR 581 >gi|46579649|ref|YP_010457.1| amino acid ABC transporter periplasmic amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120602868|ref|YP_967268.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4] gi|46449064|gb|AAS95716.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120563097|gb|ABM28841.1| amino acid ABC transporter substrate-binding protein, PAAT family [Desulfovibrio vulgaris DP4] gi|311233447|gb|ADP86301.1| extracellular solute-binding protein family 3 [Desulfovibrio vulgaris RCH1] Length = 246 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 30/217 (13%), Positives = 68/217 (31%), Gaps = 13/217 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 + + V AN G VD+ A++ K+ + + F L + Sbjct: 24 TVVFAHDATWPPMEFVDANKQIVGLAVDYVDAIAKEAG---FKVVHKNVAWDGIFAGLAA 80 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 + D ++ + T R+ + F + Q ++ K ++ + G ++ Q T Sbjct: 81 GKYDAIASSVTITEERKK--AMDFTMPYFDVKQALVVPKTTEAKTLEDMKGKTLGAQIST 138 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND---RP 211 T + ++ + R D D L + + Sbjct: 139 TGHFAIKRTA-----GVTAKSYDEIGLAMEDLFNGRIDGVVCDDPVAANYALQQEEYAKK 193 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + + D A+ QG+ E ++++ A+ Sbjct: 194 LKIAFIVDTPESEYYGIAVKQGNKELVDLINKGIEAV 230 >gi|94987175|ref|YP_595108.1| amino acid ABC transporter periplasmic protein [Lawsonia intracellularis PHE/MN1-00] gi|94731424|emb|CAJ54787.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Lawsonia intracellularis PHE/MN1-00] Length = 265 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 83/243 (34%), Gaps = 7/243 (2%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K V + ++ + + + ++ + KRG L+ G + + +G++ GFD Sbjct: 1 MKKLLIVLLAIIVCSYSYTHAKMEPLIEGVIKRGVLRVGFAP-FLPWIIQNKDGEYVGFD 59 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + L+ + +Q +P E +L + + DI+ TL R +L + F Sbjct: 60 IDIAKRLAQDLG---VTLQLVPTRWTEIIPSLLANKFDIIISGATITLER--NLQVNFSN 114 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + + + KK V T+ K K +F+ Sbjct: 115 PYHQTDIEVLANAKKVKGMKFPQDFNKPEVIVAIRNGSTVITPAKQLLPKASFRLFDDEV 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + N + + I+ + AI +GD + NI Sbjct: 175 ASIKDVESGQSHILLASAPLPAIQ-AINSNGNLIRLDTLPITHQSVGFAIKKGDPDSLNI 233 Query: 241 VSW 243 ++ Sbjct: 234 LNN 236 >gi|170724279|ref|YP_001751967.1| extracellular solute-binding protein [Pseudomonas putida W619] gi|169762282|gb|ACA75598.1| extracellular solute-binding protein family 3 [Pseudomonas putida W619] Length = 273 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 37/260 (14%), Positives = 82/260 (31%), Gaps = 23/260 (8%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 + L+ TS + + L ++ R + + F+ + GFDVD +A Sbjct: 6 LLCAGLLAFSATSAAFAGATLDRVESRKEVVNVLMESYPPFSFLNEQNQLDGFDVDVAKA 65 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 +++ + ++ + S + D+ + + R F Y Sbjct: 66 VAAKLGVK---LRLETPSWDVIAAGRWSGRYDLCICSMTPSKARAEV--FDFPVEYYASP 120 Query: 127 QGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI----------V 175 + K + I + L G + + + ++ E L + I Sbjct: 121 AVIVVNAKDERIHAAKDLDGLKVGLTSASSYESYLNKNLVIEGAEDQKIEYPFDFVQIAP 180 Query: 176 FERVEEIDAAYRAH---RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232 ++ R DA ++ + R + + + P + AI + Sbjct: 181 YDTDNVAFQDLGLGAGVRLDAILTNLVTAQPRLAQDKR---FKLAGAPLYEEPNSVAIEK 237 Query: 233 GDTEWYNIVSWTHYAMVTAE 252 GD EW + +A + A+ Sbjct: 238 GDPEWDAKLRQV-FAELKAD 256 >gi|170735047|ref|YP_001774161.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|169821085|gb|ACA95666.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 260 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 79/221 (35%), Gaps = 13/221 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G KGFD+D AL + + +K ++ + Sbjct: 23 KEWTTIRIGVDPTYPPFESTATDGSVKGFDIDLGNALCAKL---KAKCVWVSSSFDGLIP 79 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149 LQ+++ D++ + T R + F Y + I G + ++L+G + Sbjct: 80 GLQARKFDVILSSMAATEQR--RQQIDFTDRLYRNQTRLIARTGSGLLPDAAKLAGKRVA 137 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ GT E + + + + ++ A R D D L Sbjct: 138 VEQGTVQETYAREKWAPAK--VEVVPYPSYDQAYADLVTGRVDGVLMDAVQGQLGFLATP 195 Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245 R ++ + + A + + DT+ + ++ Sbjct: 196 RGKGFSFAGGVVYDAKIMGNGDAAGVRKTDTDLRDALNRAI 236 >gi|120403816|ref|YP_953645.1| extracellular solute-binding protein [Mycobacterium vanbaalenii PYR-1] gi|119956634|gb|ABM13639.1| amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium vanbaalenii PYR-1] Length = 306 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 75/245 (30%), Gaps = 16/245 (6%) Query: 22 TNASIL-GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 A+ + IK G L G+N +G GFDVD A++ + P Y Sbjct: 54 AIANTVPEAIKSTGKLIVGVNIPYAPNEFKDESGKIVGFDVDLMNAIAGTLGLTPE---Y 110 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 + + ++Q ++ + + RE + F + G + I Sbjct: 111 READFAKIIPSIQGGTFNVGMSSFTDSKERE--QQVDFV-TYFSAGTLWAQPAGGQI-DP 166 Query: 141 SQLSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 G + VQA T E A I F+ + A + DA + Sbjct: 167 ENACGKKVAVQATTVQETDELPARSKKCTDAGQPAIEIIAFDSQDAATNAVVLGQADAMS 226 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 D L + V ++ +P + +G +++ ++ + Sbjct: 227 ADSP--VTLYAIKQTNGKLVQAGEVFDSAPYGWPVEKGSPLAQSLL-QALEHLIETGKYK 283 Query: 256 ITQKN 260 N Sbjct: 284 EIAAN 288 >gi|25029144|ref|NP_739198.1| putative amino acid ABC transporter glutamin-binding protein [Corynebacterium efficiens YS-314] gi|23494431|dbj|BAC19398.1| putative amino acid ABC transporter glutamin-binding protein [Corynebacterium efficiens YS-314] Length = 368 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 79/219 (36%), Gaps = 12/219 (5%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 +I +RG L G++ + +G +GF+V + ++ IF +P + + + A + Sbjct: 106 EIFQRGRLIVGVDQSKNLLSFRDPVSGQLRGFEVQLAKEIARDIFGNPEAVDFRFIEAGD 165 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147 L +D++ R+ T R + F ++ GI + L+G + Sbjct: 166 SLRGLSRGDVDMVIRSVSVTEDRLRRM--EFSTPYMRTQTRLLVMDNSGIQGIEDLAGNT 223 Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207 +CV G+T + + A + + A GD + L + Sbjct: 224 VCVADGSTALQKTRAMAPE----SSILRTRNWSDCLMALQQQQAQAILGDDAVLAGIAAQ 279 Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGD--TEWYNIVSWT 244 + ILP I++ A AI + +V Sbjct: 280 DP---YTRILPSILAWESYAVAIAPSRASRDTTGLVRQV 315 >gi|298736104|ref|YP_003728629.1| putative polar amino acid transport system substrate-binding protein [Helicobacter pylori B8] gi|298355293|emb|CBI66165.1| putative polar amino acid transport system substrate-binding protein [Helicobacter pylori B8] Length = 256 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 33/251 (13%), Positives = 75/251 (29%), Gaps = 15/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L+I FF F +S+ + + + G F G G+D Sbjct: 1 MKKVLFL----LVISFFGGFLNASSLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R L+ + I++ + L+S + D+++ T ++ Sbjct: 57 VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQAAFDKSL 112 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G ++ K I + + G +T A + + + Sbjct: 113 PYSYSGTIMLVRKDENRIKDIKDIKGLKAANTLSSTYGEI------AFKYDAQIVSVDSM 166 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R D A+ T+ + + I + + Sbjct: 167 AQALLLVAQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALE 226 Query: 240 IVSWTHYAMVT 250 +++ ++ Sbjct: 227 LINQAMQRLIN 237 >gi|259908982|ref|YP_002649338.1| glutamine ABC transporter periplasmic protein [Erwinia pyrifoliae Ep1/96] gi|224964604|emb|CAX56117.1| Glutamine high-affinity transporter [Erwinia pyrifoliae Ep1/96] Length = 248 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 74/216 (34%), Gaps = 12/216 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 L +T V F + G++ GFD+D A++ + + P++ A Sbjct: 23 AEKKLVVATDTAFVPFEFKQG-GNYVGFDIDLWDAIAKQLNMEY---TLKPMDFSGIIPA 78 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICV 150 LQ++ ID+ T R+ +AF Y G + + + L+G + V Sbjct: 79 LQTRNIDLALAGITITDERKK--AIAFSDGYYKSGLLVMVNANNDSVKGIDDLNGKVVAV 136 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++GT + + K F ++ +R DA D + T + Sbjct: 137 KSGTGSVDYAKQHIKYK----DLRQFPNIDNAYMELGTNRADAVLHDTPNILYFINTAGK 192 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + D I A +G + V+ Sbjct: 193 G-QFKAVGDSIEAQQYGIAFPKGSDDLREKVNGALK 227 >gi|301301393|ref|ZP_07207533.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300850998|gb|EFK78742.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 499 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 83/269 (30%), Gaps = 33/269 (12%) Query: 1 MY--KDFFVSILCLIILFFTSFS----------------TNASILGDIKKRGFLKCGINT 42 M K + + L+++ + T L +K++G L G++ Sbjct: 1 MKIFKKILMLLAVLMMVVTPFAAITADTTSSSSSADTAKTTDDSLKKVKEKGTLVVGLSA 60 Query: 43 GLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99 + ++ G D+ + + + + +N +AL++ +ID Sbjct: 61 DYPPYEFTTKQDGKTEYVGIDIQIAKKFAKDLGVK---LVIKNMNFDSLLVALETGKIDT 117 Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK--KKGISSVSQLSGASICVQAGTTTE 157 + + T R + F I Y G+ +++K K +S G ++ Q GT Sbjct: 118 IISAMNPTEERRK--SVDFSNIYYSGGKYIVINKKDKSKYTSKESFKGQTVGAQNGTLEY 175 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 + F ++ + A ++ + + A N Sbjct: 176 NLIKQQFP----GATVKGLAKLNNLIIALQSGKVSGVLMEEPTAKAYVQNNPNLYTFNSK 231 Query: 218 PDIISKSP-LAPAIIQGDTEWYNIVSWTH 245 + A A +G T + T Sbjct: 232 VSVDVNETGAAMAFPKGATALTQAANKTI 260 >gi|16119461|ref|NP_396167.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15161999|gb|AAK90608.1| ABC transporter, substrate binding protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 259 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 49/222 (22%), Positives = 90/222 (40%), Gaps = 11/222 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 L D+ G L+ G+ + A G G DV+ R ++ + + ++ +PL Sbjct: 24 DTLADVTSNGKLRVGVLLDAAPWGYKDAEGKDTGLDVELARIMAKDLNAE---LEIVPLT 80 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 R +L + ++D+L T R + + F G + I VS L+ Sbjct: 81 GASRIPSLLADKVDVLIAAAGATPER--AQQVMFSQPYAAVSLGVFGGDGEKIDDVSGLA 138 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G I V G+T + L D + FE AA+ A + D + + + A+ Sbjct: 139 GKQIAVAKGSTLDTWLTDNAPE----VKLVRFEDTPSAIAAFLAGQADYFAENSAI--AV 192 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 K+ +D P ++V + I SP + QG+ + N ++ + Sbjct: 193 KVADDNPGKNVAIVYRIRLSPAHVGVKQGEQNFLNWINTFLF 234 >gi|22126707|ref|NP_670130.1| arginine 3rd transport system periplasmic binding protein [Yersinia pestis KIM 10] gi|45441072|ref|NP_992611.1| arginine-binding periplasmic protein 1 [Yersinia pestis biovar Microtus str. 91001] gi|21959726|gb|AAM86381.1|AE013886_6 arginine 3rd transport system periplasmic binding protein [Yersinia pestis KIM 10] gi|45435931|gb|AAS61488.1| arginine-binding periplasmic protein 1 precursor [Yersinia pestis biovar Microtus str. 91001] Length = 251 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 76/214 (35%), Gaps = 12/214 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ F + AN +GFD+D AL + D + +L+ Sbjct: 30 TIRFAAEATYPPFEFIDANNKMQGFDIDLANALCKEMQAD---CTFTNQAFDSLIPSLKF 86 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K+ D + D T R+ + F Y + FI K ++ ++ L G + +Q G+ Sbjct: 87 KRFDAVISGMDITPERQKQVA--FTQPYYDNSALFIAQK-DKVADLAALKGKRVGMQNGS 143 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PS 212 T + L + + + ++ + + R DA GD + + ND+ Sbjct: 144 THQKYL----MEKHPEITAVPYDSYQNAILDLKNGRLDAVFGDTAVVNEWLKQNDQLAAV 199 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + L A+ Q +TE + Sbjct: 200 GDKVTDADYFGTGLGIAVRQSNTELQGKLDAALT 233 >gi|108797761|ref|YP_637958.1| serine/threonine protein kinase [Mycobacterium sp. MCS] gi|119866851|ref|YP_936803.1| protein kinase [Mycobacterium sp. KMS] gi|108768180|gb|ABG06902.1| serine/threonine protein kinase with extracellular ligand sensor(s) [Mycobacterium sp. MCS] gi|119692940|gb|ABL90013.1| serine/threonine protein kinase with extracellular ligand sensor(s) [Mycobacterium sp. KMS] Length = 604 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 75/244 (30%), Gaps = 14/244 (5%) Query: 17 FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76 S A++ D+++ G L G+N A GD GFDVD +A++ + P Sbjct: 347 GAVPSIAATVPADVRESGRLVIGVNVPYAPNEFRDAYGDIVGFDVDLMKAVARTLGLVPE 406 Query: 77 KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 + + ++QS + + TL RE + F G + Sbjct: 407 ---FRETAFESVIPSVQSGAFTLGMSSITDTLEREK--AVDFV-TYLEAGTLWAQRAGSE 460 Query: 137 ISSVSQLSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 + S G + V E A +VF +++ AA A Sbjct: 461 VVDPSNACGLRVGVAYSVIQETDELPAKSEACVAAGREPIRKVVFTEQDDVTAALLAGEV 520 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 DA + D ++ +P + +G + + ++ Sbjct: 521 DAMSADSP--VTGFAIKTSGGALEPAGEVFDSAPYGWPVAKG-SALAESLRQALEHVMAT 577 Query: 252 EELG 255 E Sbjct: 578 GEYR 581 >gi|313890948|ref|ZP_07824570.1| ABC transporter, permease protein [Streptococcus pseudoporcinus SPIN 20026] gi|313120672|gb|EFR43789.1| ABC transporter, permease protein [Streptococcus pseudoporcinus SPIN 20026] Length = 724 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 66/210 (31%), Gaps = 15/210 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M IL ++ L F I + +T F ++ +KG D Sbjct: 1 MKNKIKGVILAILALSFIFSG--------IANAETVTIVSDTAYAPFEYKDSDQIYKGID 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++ D + A+QS Q L T T R+ F Sbjct: 53 VDIIKEVAKRQKWDY---KMTYPGFDAAVNAVQSGQAKALMAGTTITKERQKV--FNFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K K + S+L+G ++ V+ GT ++ L + F+ + Sbjct: 108 PYYDTKIVIATQKAKPVKKYSELNGKTVGVKNGTASQSFLDKNKDTYGFS--VKTFDTGD 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + DA D + N Sbjct: 166 LMYNSLASGSIDAVMDDEPVIQFAIKQNQD 195 Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 33/242 (13%), Positives = 74/242 (30%), Gaps = 11/242 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 ++ K ++ F G + G D++ +A++ I+ A Sbjct: 267 EKKSYKIVADSSFAPFEFQNDKGQYVGIDMELIKAIAKE---QGFTIEIANPGFDAALNA 323 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 +QS Q D + T R+ F Y + I S L ++ + Sbjct: 324 VQSGQADGVIAGMSITDERK--QIFDFSDSYYTSNILLGVKSGSSIKSYEDLKDKTVGAK 381 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 GT + L + + K F+ + + A A D LK + + Sbjct: 382 KGTASYDFLDKNKEKYGYK--IKAFDEASSMYDSLNAGSIVALMDDE---AILKYSIQQG 436 Query: 212 SEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270 + + A+ + + E ++ + ++ + + N +D+ Sbjct: 437 RKFDTPIEGEPSGEYGFAVKKGTNPELIDMFNNGLASLKESGKYKSIINNYLASDQDSKG 496 Query: 271 PD 272 + Sbjct: 497 KE 498 >gi|260461092|ref|ZP_05809341.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|259033126|gb|EEW34388.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] Length = 269 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 83/253 (32%), Gaps = 11/253 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V +L + + + NA L DI K G + G+ F+ A+ KG+D+D + Sbjct: 14 VLVLGAAGMGSATQAANADALADITKAGSINVGVFADFPPFSSASADMSLKGYDMDVAQY 73 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + + + + + R L ++DIL +E + F Sbjct: 74 IADTLKVKLNPVA---VTGQNRIPYLNDHRVDIL---MSVGYSKEREQVIDFAAAYAPYY 127 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 I + L+ SI V GT + +L + A F+ + A+ Sbjct: 128 IAVIGPAAMAVKGKEDLADKSIAVNRGTLEDTSLTEAAPA---SADIKRFDNYNSVIQAF 184 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + D + S S + + + + V+ Sbjct: 185 ISGQTQLMVVGNDVGAQVLAKQDALKPEQKFQLLTSPSHIG--LNKNEDALKKAVNDAIA 242 Query: 247 AMVTAEELGITQK 259 M+ +L + K Sbjct: 243 KMLADGKLDESSK 255 >gi|238853899|ref|ZP_04644262.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus gasseri 202-4] gi|238833485|gb|EEQ25759.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus gasseri 202-4] Length = 498 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 78/228 (34%), Gaps = 12/228 (5%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAEV---KANGDWKGFDVDFCRALSSAIFDDPSKI 78 S+L IKK G L GI+ + G D++ + ++ + + Sbjct: 36 AEGSVLKKIKKSGELVVGISADYPPLEFTASENGKTKYVGVDIELAKDIAQDLGVK---L 92 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK-KGI 137 ++ +AL++ ++D++ T R+ S+ + + K Sbjct: 93 VIKNMSFDSLLVALETGKVDMVISAMTPTPERKQSVAFSKIYYKPSGEYFLVNKKDKDKY 152 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +S+ L G +I Q G+ + K ++ + A ++ + A + Sbjct: 153 TSIQSLKGQAIGAQTGSNQYNLVKSQMK----DSKLKGLGKINNLVLALQSGKVSAVVVE 208 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + N+ V ++S A AI +G E V+ T Sbjct: 209 E-LIAKAYAENNNSLAAVRSNLKETQSGNAVAIAKGQDELVAQVNKTI 255 >gi|330889586|gb|EGH22247.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. mori str. 301020] Length = 260 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 82/223 (36%), Gaps = 13/223 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ L+ G++ F A+G GFD+D A+ + +++ + Sbjct: 23 KEYKELRFGVDPSYAPFESKAADGTLVGFDIDLGNAICKEL---KVTCKWVESDFDGMIP 79 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149 L++++ D + + T RE + F + + K G + + L G ++ Sbjct: 80 GLKARKFDGVISSMTVTPAREKV--IDFSNELFSGPTSLVYKKGAGFTADPASLKGKTVG 137 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + GT E + + +++ A + R DA D+ L + Sbjct: 138 YEQGTIQEAYAKAVLDKAGVSTK--AYANQDQVYADLTSGRLDASIQDMLQAELGFLKSP 195 Query: 210 RPSEHVILP----DIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 +++ + +++ P A I +G+ E ++ AM Sbjct: 196 AGADYEVSKPIDSELLPAKP-AIGIAKGNKELKALLDKGIKAM 237 >gi|330832852|ref|YP_004401677.1| polar amino acid ABC transporter inner membrane subunit [Streptococcus suis ST3] gi|329307075|gb|AEB81491.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis ST3] Length = 732 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 66/210 (31%), Gaps = 15/210 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + ++ +FF +K + + F ++ +KG D Sbjct: 1 MKKKLLMLLASILPVFFIFTG--------VKADDTIDIVFDNAYAPFEFKDSDQIYKGLD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ ++ A+Q+ D L T T R+ F Sbjct: 53 VDIINEVAKRSGWTMNQ---SFPGFDAAVNAVQAGSADALMAGTTITEARKKV--FTFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + K ISS L G ++ V+ GT + L + + + F+ + Sbjct: 108 PYFDTKIVIATTKANTISSYKDLKGKTVGVKNGTAAQNFLEENKDKYGY--NVKTFDTGD 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + A DA D + + Sbjct: 166 LMYNSLSAGAVDAVMDDEAVIQYAIQQGQD 195 Score = 99.0 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 74/242 (30%), Gaps = 15/242 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L T ++ + +K + ++ F +G++ G D++ +A++ Sbjct: 262 LSLTGNASAKATP--VKSSYTIVA--DSSFAPFEYQDESGNYVGIDMELIKAIAEQ---Q 314 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 I A+Q+ Q D + T R+ F Y + Sbjct: 315 GFTITIQNPGFDAALNAVQAGQADAVIAGMSITDARKEI--FDFSNAYYTSNILLAVKNG 372 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I+S L G ++ + GT + L + Y F+ + + + DA Sbjct: 373 SDIASYEDLKGKTVGAKNGTASYSFLEEN--KAKYGYTLKAFDEASSMYDSLNSGSIDAL 430 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEE 253 D L + A+ +G + E + + A+V + + Sbjct: 431 MDDE---AVLLYAIQQGRNFATPIPGEKSGEYGFAVKKGANPELIEMFNNGLAALVESGK 487 Query: 254 LG 255 Sbjct: 488 YD 489 >gi|325997819|gb|ADZ50027.1| putative amino acid ABC transporter protein [Helicobacter pylori 2017] Length = 257 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 33/251 (13%), Positives = 75/251 (29%), Gaps = 14/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +S L L+I F F +S+ + + + G F G G+D Sbjct: 1 MKK---ISCLLLVISFLGGFLNASSLYEKLVNKETISVGTEGIYPPFTYHNKEGKLTGYD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R L+ + I++ + L+S + D+++ T ++ Sbjct: 58 VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQAAFDKSL 113 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G ++ K I + + G +T A + + + Sbjct: 114 PYSYSGTIMLVRKDENRIKGIEDIKGLKAANTLSSTYGEI------AFKYDAQIVSVDSM 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R D A+ T+ + + I + + Sbjct: 168 AQALLLVAQKRADLTLNSSLAILNYLNTHKNSPFKIAWESKEKDGGASFVINKHQEKALE 227 Query: 240 IVSWTHYAMVT 250 +++ ++ Sbjct: 228 LINQAMQRLIN 238 >gi|150403688|ref|YP_001330982.1| extracellular solute-binding protein [Methanococcus maripaludis C7] gi|150034718|gb|ABR66831.1| extracellular solute-binding protein family 3 [Methanococcus maripaludis C7] Length = 251 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 85/239 (35%), Gaps = 11/239 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 V IL +I L + + + + + G L GI + A N GF++D Sbjct: 6 VLILSMIFLIIIAGCISQNTNKNTIQEGALTIGIAPDIYPMAYF-ENNVPTGFEIDLITE 64 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 ++ + +P + A+++ ++D T RE + F + Sbjct: 65 IAKRMGLEPE---FKTYEFSSLLGAVENNKVDCAVAFITITPERENH--VDFSRCYFETY 119 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++ ++ + + L + V AG+T E + + +M++ I +E + E+ Sbjct: 120 TTILVREEDTSTCIRCLENRKVGVLAGSTQESLMEGF--KDDMEFELIPYENIREMHHDL 177 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + DA + D ++ I + + I + + + N ++ Sbjct: 178 LSGNIDAEVFEYVCSKGFI---DNNDPVKVIGGKIDINYIGIPINEKNDDLRNEINNVI 233 >gi|224500426|ref|ZP_03668775.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes Finland 1988] gi|254827790|ref|ZP_05232477.1| glutamine ABC transporter [Listeria monocytogenes FSL N3-165] gi|258600171|gb|EEW13496.1| glutamine ABC transporter [Listeria monocytogenes FSL N3-165] Length = 480 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 95/297 (31%), Gaps = 22/297 (7%) Query: 1 MYK----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K ++I C+ FT NA + G +T F + +G+ Sbjct: 1 MKKFSRFILMMAIACVAAFIFTGNGLNAKAAEE-----TYLIGTDTTFAPFEF-EKDGEH 54 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D+D +A++ K + + AL++ Q+D + T R+ Sbjct: 55 VGIDMDILKAIAKD---QNFKYEIKAMGFNAAVQALEANQVDGVIAGMSITDERK--QKF 109 Query: 117 AFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + G I+ I + L G + V+ GT + +V Sbjct: 110 DFSDPYFDSGVVMGILKDNDEIKTYDDLKGKKVAVKTGTEGYAFAEKI--KDKYDFDIVV 167 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ ++ + A D L T + I+ + + A+ +G Sbjct: 168 FDDSAQMYDDVKTRNSVACFDDYPVLAYGVQT---GNGLKIVTEKEKGNSYGFAVNKGKN 224 Query: 236 EWYNIVSWTHYAMVTA-EELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291 + + A E KN + N + F+GI KSS GL Sbjct: 225 QELLEKFNAGLVNIKASGEYDKILKNYLGKNAIKENTTEKGFMGIIKSSWPALLSGL 281 >gi|57865360|ref|YP_189561.1| amino acid ABC transporter, amino acid-binding protein [Staphylococcus epidermidis RP62A] gi|251811883|ref|ZP_04826356.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus epidermidis BCM-HMP0060] gi|282875170|ref|ZP_06284043.1| bacterial extracellular solute-binding protein, family 3 [Staphylococcus epidermidis SK135] gi|293367121|ref|ZP_06613792.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus epidermidis M23864:W2(grey)] gi|57636018|gb|AAW52806.1| amino acid ABC transporter, amino acid-binding protein [Staphylococcus epidermidis RP62A] gi|251804680|gb|EES57337.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus epidermidis BCM-HMP0060] gi|281295935|gb|EFA88456.1| bacterial extracellular solute-binding protein, family 3 [Staphylococcus epidermidis SK135] gi|291318682|gb|EFE59057.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus epidermidis M23864:W2(grey)] gi|329734612|gb|EGG70923.1| ABC transporter, substrate-binding protein, family 3 [Staphylococcus epidermidis VCU045] Length = 262 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 71/214 (33%), Gaps = 15/214 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGD---IKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 K + I+ L+ + + +++ + K + L+ G F N G+ Sbjct: 2 KRLLLCIVALVFVLAACGNNSSNNKDNQSSSKDKDTLRVGTEGTYAPFTYHNKNDQLTGY 61 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D +A++ + K+++ + F L + + D+++ RE F Sbjct: 62 DIDVIKAVAKE---ENLKLKFNETSWDSMFAGLDAGRFDVIANQVGVNKDREKKYK--FS 116 Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + ++ +K I+S + + G + Q T+ LA A + Sbjct: 117 EPYTYSSAVLVVRENEKDITSFNDVKGKKLA-QTFTSNYGQLAKDKGA-----DVTKVDG 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 + + R D D + + Sbjct: 171 FNQSMDLLLSKRVDGTFNDSLSYLDYRKQKPNAK 204 >gi|300718407|ref|YP_003743210.1| cyclohexadienyl dehydratase [Erwinia billingiae Eb661] gi|299064243|emb|CAX61363.1| cyclohexadienyl dehydratase [Erwinia billingiae Eb661] Length = 260 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 80/257 (31%), Gaps = 10/257 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L ++ S L + + L + ++A+G ++G D Sbjct: 1 MIKKIRIKSGVAALLLVAGGASAQSHLDRVLQSKVLTVCTTGDYKPYTFLRADGQYEGID 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + ++L+ + + ++++P K +KQ DI TL R+ + A Sbjct: 61 IAMAQSLAKNLGAE---VKWVPTTWKTLTPDFIAKQCDIALGGVSVTLKRQQTAWFATPL 117 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIVFER 178 T KK ++ QL+ S+ + T E + Y N +F Sbjct: 118 GTDGKIPLVRCADKKKYRTIEQLNKPSVRLIEPAGGTNEAFVHAYLPQAN----LTLFHD 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I + D D S + + + A + + D W Sbjct: 174 NVTIFQQLVDKKADVMITDASEAMFQQKHYPKLCAINPEQPMQYGE-KAYMLPRDDLSWK 232 Query: 239 NIVSWTHYAMVTAEELG 255 V + E Sbjct: 233 LYVDQWLHLSNATGEYQ 249 >gi|262277191|ref|ZP_06054984.1| cyclohexadienyl dehydratase [alpha proteobacterium HIMB114] gi|262224294|gb|EEY74753.1| cyclohexadienyl dehydratase [alpha proteobacterium HIMB114] Length = 255 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 88/248 (35%), Gaps = 21/248 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 M K I +I L + S L I G L+ G + + +KGF Sbjct: 1 MKKILSALIFIIISLS----AQAESSLNKILSSGELRVGTTGDWDPMSVKDPSANTYKGF 56 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D L+ + K++++P K + S + DI +T T + + F Sbjct: 57 DIDVMNELAKDM---DVKVRFVPAEWKTIVSGITSNRYDI---STSVTKTPKRAKVAGFT 110 Query: 120 PITYFDGQG--FIMHKKKGISSVSQLSGA--SICVQAGTTTELTLADYFKAHNMKYHPIV 175 Y G + S+ L+ +I GT+ E ++F + Sbjct: 111 NTYYKYGTVPLVLKKNLNKFSTWDSLNNKSVTIATTLGTSQEEKAKEFFPKSKLNSVEAP 170 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 +E+ A R D S+ A KL P ++ + + LA + +GD Sbjct: 171 ARDFQEVL----AGRADGNIT--SSTEANKLVIKYPQLAIVPDGEKNPAFLAMMVAKGDD 224 Query: 236 EWYNIVSW 243 +W N V+ Sbjct: 225 KWRNYVND 232 >gi|260912989|ref|ZP_05919474.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] gi|260632979|gb|EEX51145.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] Length = 263 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 79/257 (30%), Gaps = 29/257 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +L L ++ + + F G+ GFD Sbjct: 25 MKKLLLTVLLASSALVASA--------------KDITFAMEPSYPPFESTNEKGEIIGFD 70 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ I + + L+ K D D T R ++F Sbjct: 71 VDIANAICKEI---QATCHFKGQAFDSLISGLKFKHFDASISAIDITEARAK--QVSFSE 125 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y FI K K + + + VQ GTT + + K +Y P+ + ++ Sbjct: 126 SYYDSSASFIAVKGKADLTTA----KKVGVQNGTTFQQYVVAEAK----QYQPVPYASLQ 177 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWY 238 + R D GD + L + D + + L A+ + + E Sbjct: 178 SAILDLKNGRIDVIFGDTAVLVDMLQKEDSLGFVGDKVTNKKYFGNGLGIAVNKANKELL 237 Query: 239 NIVSWTHYAMVTAEELG 255 + ++ A+ + E Sbjct: 238 SELNKGLAAIKASGEYQ 254 >gi|153827855|ref|ZP_01980522.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 623-39] gi|148876700|gb|EDL74835.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 623-39] Length = 278 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 86/245 (35%), Gaps = 16/245 (6%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 + +++ L IK+RG L+ G++T V +A G+ GF++D + L++ Sbjct: 24 AFTLPAVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW 82 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++++P AL +K+ D++ T R S + F G +K Sbjct: 83 ---QVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAANK 137 Query: 134 K--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 K +G S + + ++ V A + K + F+ + Sbjct: 138 KLAEGFSKLEDFNKRNVKVAAR--RGAFTVQVARETFPKASVLQFDDDAQAFQEVINGNA 195 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWTHY 246 A + + + + +SK A A+ G+ + I T Sbjct: 196 HAVIASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKKAFFDQWIADRTAD 254 Query: 247 AMVTA 251 + A Sbjct: 255 GWLQA 259 >gi|254250467|ref|ZP_04943786.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] gi|124879601|gb|EAY66957.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Burkholderia cenocepacia PC184] Length = 260 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 79/221 (35%), Gaps = 13/221 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G KGFD+D AL + + +K ++ + Sbjct: 23 KEWTTIRIGVDPTYPPFESTATDGSVKGFDIDLGNALCAKL---KAKCVWVSSSFDGLIP 79 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149 LQ+++ D++ + T R + F Y + I G + ++L+G + Sbjct: 80 GLQARKFDVILSSMAATEQR--RQQIDFTDRLYRNQTRLIARTGSGLLPDAAKLAGKRVA 137 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ GT E + + + + ++ A R D D L Sbjct: 138 VEQGTVQETYAREKWAPAK--VEVVPYPSYDQAYADLVTGRVDGVLMDAVQGQLGFLATP 195 Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245 R ++ + + A + + DT+ + ++ Sbjct: 196 RGKGFSFAGGVVYDAKIMGNGDAAGVRKADTDLRDALNRAI 236 >gi|260461492|ref|ZP_05809739.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|259032562|gb|EEW33826.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] Length = 290 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 89/260 (34%), Gaps = 10/260 (3%) Query: 3 KDFFVSILCLIILFFT------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 K + +L + + + S+L + RG L G + + G+ Sbjct: 12 KLGMAGLATAGVLATVDAQKAAAQAASDSLLRTVLDRGKLIVGTGSTNAPWHFENDAGEL 71 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D+ R L+ +FDDP+K++++ + +R + + ++DI + T R S + Sbjct: 72 VGMDITMGRILAKGLFDDPTKVEFVMQDPAQRIPNVTTNKVDITIQFMTMTAQR--SQLI 129 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y +G + + +L + + + + Sbjct: 130 NFTRPYYVEGVALLTLPNAENKTFDKLLAGGSATRISILQNVDAETSVHYALPQAQVMQI 189 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + + A + R DA D+S + L P ++ A+ QGD + Sbjct: 190 DTQANVLQALESKRVDAAAVDLSTVRWLASR--NPDKYFDAGKSWYSMLYGAALRQGDLD 247 Query: 237 WYNIVSWTHYAMVTAEELGI 256 W V T + E + Sbjct: 248 WLTFVDQTFTIAMFGHESAL 267 >gi|323485583|ref|ZP_08090927.1| hypothetical protein HMPREF9474_02678 [Clostridium symbiosum WAL-14163] gi|323692931|ref|ZP_08107153.1| glutamine-binding periplasmic protein [Clostridium symbiosum WAL-14673] gi|323401101|gb|EGA93455.1| hypothetical protein HMPREF9474_02678 [Clostridium symbiosum WAL-14163] gi|323503014|gb|EGB18854.1| glutamine-binding periplasmic protein [Clostridium symbiosum WAL-14673] Length = 282 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 84/237 (35%), Gaps = 21/237 (8%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L N + +GD G DV+ +A+++ + ++Q + A+ S Sbjct: 67 LVMATNAEFPPYEYY-EDGDIVGIDVEIAKAIAAKLG---MELQIEDMAFDAIIPAVTSG 122 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 + D + T R+ + F Q I+ + I+ L+G I VQ GTT Sbjct: 123 KADFGAAGMTVTEERQR--SVEFTDTYANSNQVAIVKEDSDITGSDALAGKIIGVQLGTT 180 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 + + A + + E + + DA D + A + Sbjct: 181 GDALATEIKDA-----TVERYNKGLEAVQSLTQGKIDAVVIDQATAEAFVKKTEG---IK 232 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPD 272 IL + +S+ A AI +G+ E ++ + EE I+++ + + Sbjct: 233 ILEEKMSEEEYAIAIKKGNMELVEKMNEAIKELK--EEGK-----IDEIVAKYMDAE 282 >gi|190891147|ref|YP_001977689.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] gi|190696426|gb|ACE90511.1| probable amino acid ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] Length = 264 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 70/213 (32%), Gaps = 12/213 (5%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAI 71 I L + + + L +K RG L G+ F + + KG+++D +AL+ + Sbjct: 3 ISLLAATQAFADATLDRVKARGALTVGVILSGAPFGYIDPTSQTQKGYNLDIAKALADDL 62 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 + + R LQ ++DIL N +T R L P G + Sbjct: 63 GVKLETVT---VTPPNRVQFLQQGKVDILIANMQYTEDRAKVLDWVPTP-YDRSGGAAVG 118 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 K G+ + L G +CV G+ L + + A E A + C Sbjct: 119 RKDSGLKDWADLKGKPVCVSQGSNFTQPLIEKYGA-----EVKGLPSQPESLLALQGGNC 173 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 L DRP + + Sbjct: 174 --VVAVHVGATLGLLLQDRPEDWKDYAILFPTE 204 >gi|323527838|ref|YP_004229991.1| Arogenate dehydratase [Burkholderia sp. CCGE1001] gi|323384840|gb|ADX56931.1| Arogenate dehydratase [Burkholderia sp. CCGE1001] Length = 265 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 82/272 (30%), Gaps = 24/272 (8%) Query: 1 MYKDFFVSILCLIILF---------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M K + L + + + AS L +I RG L+ ++ K Sbjct: 1 MKKVALALLGALTGILIHSGAAQAQASGTAATASRLDEILARGTLRACTTGDYKPYSFYK 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 A+G ++G D+D +L+ ++ ++ N F+A + DI TL R+ Sbjct: 61 ADGQFEGIDIDMTESLAKSLGVKAEYVKTSWSNLMNDFVA----KCDIGVGGVSPTLERQ 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAH 167 F DG+ I+ + + V G T E +F Sbjct: 117 K--RAFFTQAYMVDGKTPIVRCDDVNKYQTVAQIDQPATRVIVNPGGTNERFAKQFFTHA 174 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 N V+ I A + D D S L+ + V A Sbjct: 175 N----VTVYPDNVTIFKQILAGKADVMVTDASETL-LQQKLNPGLCSVHPDKPFQYGEKA 229 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 + +GD + V + E Sbjct: 230 WLLPRGDVVFQQYVDQWLHLARATGEYQAVSD 261 >gi|21106699|gb|AAM35487.1| cyclohexadienyl dehydratase [Xanthomonas axonopodis pv. citri str. 306] Length = 268 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 34/252 (13%), Positives = 81/252 (32%), Gaps = 6/252 (2%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + + + L+ T +T AS L + + G L+ ++ ++ +G ++G D+D Sbjct: 11 RYRICLALLLSCGTTHAATPASRLDAVLQSGVLRVCTTGDYRPYSLLRDDGQFEGSDIDL 70 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 ++L++++ ++++ + + L + + DI TL R+ + Sbjct: 71 VQSLAASL---DARVRLVRTSWPHLLPDLLADRCDIAVGGISVTLQRQRQASFSAVLDVD 127 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 + ++ QL+ + + + + +F I Sbjct: 128 GKIPLVRCVDQARYRTLEQLNRPEVRLIEPPGGTN--EAFAHRQLPQAALRLFADNTTIF 185 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 AHR D D S + + A + + D W V Sbjct: 186 QELLAHRADVMITDASEALYQQARLPGLCAIAPEQPLQYSE-KAFLLPRDDHAWKAYVDQ 244 Query: 244 THYAMVTAEELG 255 + + E Sbjct: 245 WLHLTKASGEYR 256 >gi|77748538|ref|NP_640951.2| cyclohexadienyl dehydratase [Xanthomonas axonopodis pv. citri str. 306] Length = 259 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 34/252 (13%), Positives = 81/252 (32%), Gaps = 6/252 (2%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + + + L+ T +T AS L + + G L+ ++ ++ +G ++G D+D Sbjct: 2 RYRICLALLLSCGTTHAATPASRLDAVLQSGVLRVCTTGDYRPYSLLRDDGQFEGSDIDL 61 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 ++L++++ ++++ + + L + + DI TL R+ + Sbjct: 62 VQSLAASL---DARVRLVRTSWPHLLPDLLADRCDIAVGGISVTLQRQRQASFSAVLDVD 118 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 + ++ QL+ + + + + +F I Sbjct: 119 GKIPLVRCVDQARYRTLEQLNRPEVRLIEPPGGTN--EAFAHRQLPQAALRLFADNTTIF 176 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 AHR D D S + + A + + D W V Sbjct: 177 QELLAHRADVMITDASEALYQQARLPGLCAIAPEQPLQYSE-KAFLLPRDDHAWKAYVDQ 235 Query: 244 THYAMVTAEELG 255 + + E Sbjct: 236 WLHLTKASGEYR 247 >gi|46907078|ref|YP_013467.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes str. 4b F2365] gi|224503184|ref|ZP_03671491.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes FSL R2-561] gi|254832188|ref|ZP_05236843.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes 10403S] gi|255520210|ref|ZP_05387447.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes FSL J1-175] gi|284801176|ref|YP_003413041.1| hypothetical protein LM5578_0926 [Listeria monocytogenes 08-5578] gi|284994318|ref|YP_003416086.1| hypothetical protein LM5923_0880 [Listeria monocytogenes 08-5923] gi|46880345|gb|AAT03644.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes serotype 4b str. F2365] gi|284056738|gb|ADB67679.1| hypothetical protein LM5578_0926 [Listeria monocytogenes 08-5578] gi|284059785|gb|ADB70724.1| hypothetical protein LM5923_0880 [Listeria monocytogenes 08-5923] Length = 480 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 95/297 (31%), Gaps = 22/297 (7%) Query: 1 MYK----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K ++I C+ FT NA + G +T F + +G+ Sbjct: 1 MKKFSRFILMMAIACVAAFIFTGNGLNAKAAEE-----TYLIGTDTTFAPFEF-EKDGEH 54 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D+D +A++ K + + AL++ Q+D + T R+ Sbjct: 55 VGIDMDILKAIAKD---QNFKYEIKAMGFNAAVQALEANQVDGVIAGMSITDERK--QKF 109 Query: 117 AFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + G I+ I + L G + V+ GT + +V Sbjct: 110 DFSDPYFDSGVVMGILKDNDEIKTYDDLKGKKVAVKTGTEGYAFAEKI--KDKYDFDIVV 167 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ ++ + A D L T + I+ + + A+ +G Sbjct: 168 FDDSAQMYDDVKTRNSVACFDDYPVLAYGVQT---GNGLKIVTEKEKGNSYGFAVNKGKN 224 Query: 236 EWYNIVSWTHYAMVTA-EELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291 + + A E KN + N + F+GI KSS GL Sbjct: 225 QELLEKFNAGLVNIKASGEYEKILKNYLGKNAIKENTTEKGFMGIIKSSWPALLSGL 281 >gi|107028450|ref|YP_625545.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116686445|ref|YP_839692.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105897614|gb|ABF80572.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116652160|gb|ABK12799.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 260 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 79/221 (35%), Gaps = 13/221 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G KGFD+D AL + + +K ++ + Sbjct: 23 KEWTTIRIGVDPTYPPFESTATDGSVKGFDIDLGNALCAKL---KAKCVWVSSSFDGLIP 79 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149 LQ+++ D++ + T R + F Y + I G + ++L+G + Sbjct: 80 GLQARKFDVILSSMAATEQR--RQQIDFTDRLYRNQTRLIARTGSGLLPDAAKLAGKRVA 137 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ GT E + + + + ++ A R D D L Sbjct: 138 VEQGTVQETYAREKWAPAK--VEVVPYPSYDQAYADLVTGRVDGVLMDAVQGQLGFLATP 195 Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245 R ++ + + A + + DT+ + ++ Sbjct: 196 RGKGFSFAGGVVYDAKIMGNGDAAGVRKADTDLRDALNRAI 236 >gi|121608892|ref|YP_996699.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121553532|gb|ABM57681.1| extracellular solute-binding protein, family 3 [Verminephrobacter eiseniae EF01-2] Length = 265 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 78/225 (34%), Gaps = 14/225 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 ++ G+ F EV +G KGFDVD AL + K ++ AL S Sbjct: 30 IRIGVEGEYAPFNEVDKDGKVKGFDVDIANALCDEM---RVKCSFVIQTWDGIIPALISS 86 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGT 154 + D++ + T R+ +AF Y D + K K ++ S G +I VQ + Sbjct: 87 KYDMIVSSVLITEKRKK--AVAFSKPYYTDQAVIVGPKGKAMTIRSDGFEGKTIGVQTAS 144 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE- 213 E L + F + V + + R DA + TN+ + Sbjct: 145 VYEKILKEKFPTA----TAKSYAAVPDHNLDLGNGRLDAVLAAQLPMLEWLKTNEGKNFE 200 Query: 214 ---HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + A+ +GDT N V+ + + Sbjct: 201 VKGQPFMDAKFMGAGAGVALRKGDTGLLNKVNAALDTIFKNGKYD 245 >gi|330985963|gb|EGH84066.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 266 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 85/242 (35%), Gaps = 11/242 (4%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRA 66 + L L +S + + L I++R L G+ F + KG +V+ Sbjct: 1 MLGVLASLTVSSAALADATLDRIQERHRLVVGVLLSGGPFGSIDPQTRKPKGVNVELAED 60 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + + D ++ + + R LQ ++D+L N +WT R LG P G Sbjct: 61 IGKRLGVD---VELVSVLTANRVQFLQQGKVDLLIANMEWTPERGQLLGSVPTPFYRVGG 117 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++ K I+ L G +C G++ L + F+ E A Sbjct: 118 TAAVL-KDSKITRWEDLKGQPVCTSQGSSYIKALTE------FGADIKAFKSSSESLLAL 170 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 R + C A D + + L ND ++ + ++ +P G+ + + Sbjct: 171 RGNNCVAAVHDATLVNPLLAGNDEWKDYRAITPELNPAPSVIWTRSGEADTQKRLDSIVQ 230 Query: 247 AM 248 Sbjct: 231 EW 232 >gi|329726546|gb|EGG63009.1| ABC transporter, substrate-binding protein, family 3 [Staphylococcus epidermidis VCU144] gi|329734947|gb|EGG71244.1| ABC transporter, substrate-binding protein, family 3 [Staphylococcus epidermidis VCU028] Length = 262 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 70/214 (32%), Gaps = 15/214 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGD---IKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 K + I+ L+ + + +++ + K + L+ G F G+ Sbjct: 2 KRLLLCIVALVFVLAACGNNSSNNKDNQSSSKDKDTLRVGTEGTYAPFTYHNKKDQLTGY 61 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D +A++ + K+++ + F L + + D+++ RE F Sbjct: 62 DIDVIKAVAKE---ENLKLKFNETSWDSMFAGLDAGRFDVIANQVGVNKDREKKYK--FS 116 Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + ++ +K I+S + + G + Q T+ LA A + Sbjct: 117 EPYTYSSAVLVVRENEKDITSFNDVKGKKLA-QTFTSNYGQLAKDKGA-----DITKVDG 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 + + R D D + + Sbjct: 171 FNQSMDLLLSKRVDGTFNDSLSYLDYRKQKPNAK 204 >gi|261866997|ref|YP_003254919.1| L-cystine-binding protein TcyA [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412329|gb|ACX81700.1| L-cystine-binding protein TcyA [Aggregatibacter actinomycetemcomitans D11S-1] Length = 259 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 80/262 (30%), Gaps = 21/262 (8%) Query: 1 MYKDFFV--SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K +L + L + + I ++K L G F +G G Sbjct: 1 MKKSILAKTLLLTGLALGIATQAAAGEISDRVEKTKTLLVGTEGTYAPFTFHDDSGKLTG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ +++ + KIQ+ + L +K+ D+++ T E + Sbjct: 61 FDVEIIESVAQRLG---LKIQFNETQWDSMYAGLNAKRFDLIANQTS--PSPERLKKYLY 115 Query: 119 RPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + + + I + L G Q+ T+ +A A IV + Sbjct: 116 TTPYNYSTAVIVTKEGDDSIKAFEDLKGKK-AAQSLTSNYGKIAKANGA-----ELIVVD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R D A+ + + K P A+++G+ Sbjct: 170 GLAQALKLITQDRAQTVVNDQLAVLDYFKKQPNAGLKIAVK-RDEKVPSGFAVLKGEEPL 228 Query: 238 YNIVSWTHYAMVTAEELGITQK 259 ++ EEL Sbjct: 229 VEKINQAL------EELRKDGT 244 >gi|206564411|ref|YP_002235174.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] gi|198040451|emb|CAR56436.1| periplasmic solute-binding protein [Burkholderia cenocepacia J2315] Length = 257 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 91/252 (36%), Gaps = 18/252 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F++ L + + + S +A ++ GI+ +G KGFD Sbjct: 1 MKR--FLAPLVSLCIGLAATSASA------LDAPVVRLGIDPTYPPMDAKAPDGSLKGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + Q++ L ALQ+++ID + + T RE + F Sbjct: 53 VDLGNEICRRA---QLRCQWVELEFSGMIPALQARKIDAILSSMAITAKREK--QILFSS 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + G+ + + L+G + VQ+GT E ++ + + ++ Sbjct: 108 KLFRFKSRLVARPGSGLDGTAASLAGKRVGVQSGTQFESWALAHWAPAGVG--VVPYKSQ 165 Query: 180 EEIDAAYRAHRCDA--YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 +++ A R DA + L+ + V P + + + Q DT Sbjct: 166 DDVFADLVNGRLDAALLGTVEADYGFLRQPRGKGFAFVGAPLDMGDRGVGIGMRQSDTAL 225 Query: 238 YNIVSWTHYAMV 249 + +M+ Sbjct: 226 KASIDGAIASML 237 >gi|325507519|gb|ADZ19155.1| Glutamine-binding periplasmic protein fused to glutamine permease [Clostridium acetobutylicum EA 2018] Length = 489 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 79/241 (32%), Gaps = 13/241 (5%) Query: 1 MYKDFFVSILCL----IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K F V +L + IL ++N++ + F + D+ Sbjct: 1 MKKKFLVLVLAIMMCFAILLTGCENSNSNSDKSKTSSKKYTIATDATYAPFEFRTGS-DY 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 +G D+D A++ + P+N ALQS Q+D R+ + L Sbjct: 60 QGIDIDILSAIAKK---ENFTYDLKPMNFNGIIPALQSNQVDGSVSGMSINDERKKT--L 114 Query: 117 AFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y G + + +++ + G + ++ GT + + Sbjct: 115 DFSNSYYDSGLCVVAKSDNKSVKTINDIKGKTAALKKGTAGAAYAEANKEKYG--LTLKY 172 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ + A D D + + ++ + I+ SP A+ +G Sbjct: 173 FDDSPSMFQAVMNGNADITLEDYPVIAYKISIDKNSGLKIVGDEKITTSPYGFAVKKGTN 232 Query: 236 E 236 + Sbjct: 233 K 233 >gi|317050660|ref|YP_004111776.1| family 3 extracellular solute-binding protein [Desulfurispirillum indicum S5] gi|316945744|gb|ADU65220.1| extracellular solute-binding protein family 3 [Desulfurispirillum indicum S5] Length = 261 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 73/212 (34%), Gaps = 13/212 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G+ F A G+ G V+ RA+ + + + + AL++ Sbjct: 28 LIVGMELSYPPFEMTDARGEPSGISVEMARAIGEILGRE---VIIENIPFDGLIPALRTG 84 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL--SGASICVQAG 153 +I ++ + T R + F G ++++ ++S+ +L G I V+ G Sbjct: 85 KIHMILSSMTATQERARV--VDFSEPYLSTGLCLLLNRASEVTSIDELNRPGVVIAVKRG 142 Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 TT + + +V ++ + DA+ D ++Y+ Sbjct: 143 TTGHAYASRHLSQA----RILVLDKEAAAVLELVQGKIDAFIYDQMSVYS--HWQRNRET 196 Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + + A + +G + ++ Sbjct: 197 TRAILEPFQREYWAVGLPKGSEDLRLQINDAL 228 >gi|326693556|ref|ZP_08230561.1| amino acid ABC transporter substrate-binding protein [Leuconostoc argentinum KCTC 3773] Length = 263 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 84/252 (33%), Gaps = 18/252 (7%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASILGDIKKR---GFLKCGINTGLVGFAEVKANGDW 56 M K + L ++ + + + + + G L G+ F+ + NG Sbjct: 1 MKKIIIIVASLVVVAGLAIGLTQHQARPKEASQTITPGTLTIGLEGTFAPFSYRQ-NGQL 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 GF+VD A++ + P +Y+ L +K+ D++ + T R+ Sbjct: 60 TGFEVDLSTAIAKKLGLKP---KYVQTKWDSLIAGLGAKRYDVVFNDVGITPERQK--AY 114 Query: 117 AFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + I +++++ L G + Q+ T+ L A + Sbjct: 115 LFAAPYLYAKTVLIKRTDETHLNTLADLKGKKMA-QSTTSNFGAL-----AKKSGADIVA 168 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-LPDIISKSPLAPAIIQGD 234 + E R D D+ A K N + + L +P AP + + + Sbjct: 169 VPGMTEAMNLVTTKRADGALNDLGAYATWKKANPDAATTAVDLSQESPATPAAPLLNKQN 228 Query: 235 TEWYNIVSWTHY 246 T ++ Sbjct: 229 TALQKAINNALK 240 >gi|322377286|ref|ZP_08051778.1| ABC transporter, substrate-binding protein [Streptococcus sp. M334] gi|321281999|gb|EFX59007.1| ABC transporter, substrate-binding protein [Streptococcus sp. M334] Length = 276 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 84/254 (33%), Gaps = 14/254 (5%) Query: 1 MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K ++ + + S A G++ + + N F + NG+ Sbjct: 1 MKKIVKYSSLAALGLVAAGVLAACSGGAKKEGEVASKKEIIVATNATPKPFNY-EENGEL 59 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G++++ RA+ D +++ F L + + ++ N +T R Sbjct: 60 TGYEIEVVRAIFKD--SDKYDVKFEKTEWSGVFAGLDADRYNMAVSNISYTKERAE--KY 115 Query: 117 AFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 + T + ++ K I S+ + G S V GTT+ L DY K H+ + Sbjct: 116 LYAAPTAKNPNVLVVKKDDPSIKSLDDIGGKSTEVVQGTTSAKQLEDYNKQHSDNPTVLK 175 Query: 176 FE--RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQ 232 + ++I + D D + + ++ + P + + Sbjct: 176 YTKADFQQIMGRLSDGQFDYKIFDK-IGVETVIKDQGLDNLKVIELPSDQQPYVYPLLAK 234 Query: 233 GDTEWYNIVSWTHY 246 G E + V Sbjct: 235 GQDELKSFVDKRIQ 248 >gi|259908949|ref|YP_002649305.1| Arginine-binding periplasmic protein 2 [Erwinia pyrifoliae Ep1/96] gi|224964571|emb|CAX56084.1| Arginine-binding periplasmic protein 2 [Erwinia pyrifoliae Ep1/96] gi|283478955|emb|CAY74871.1| Arginine ABC transport system, periplasmic component [Erwinia pyrifoliae DSM 12163] Length = 243 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 81/247 (32%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + + ++ + F + GFD Sbjct: 1 MKKIVLAALLASVAFATQAAE-------------KIRFASSATYPPFESLNGENQIVGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + + ++ + AL+ ++ D + D T R S ++F Sbjct: 48 IDLANALCAQM---KAECSFSNNPFDSLVPALKFRRYDAVISGMDITTER--SKQVSFTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + I K S+++QL G + V+ GTT + L + + + ++ + Sbjct: 103 PYYANSAIVIAQKG-KFSTIAQLKGKRVGVENGTTHQKYLQ----GKHPEMITVAYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGDTEWY 238 + R + GD + + TN + I + + A+ + + Sbjct: 158 NAILDLKNGRLEGILGDSAVVGGWLKTNANLATVGEHITDSDFFGTGVGIAVRKDNQALL 217 Query: 239 NIVSWTH 245 + Sbjct: 218 KQFNAAI 224 >gi|325570015|ref|ZP_08145940.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] gi|325156843|gb|EGC69014.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] Length = 760 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 76/251 (30%), Gaps = 16/251 (6%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K +++ LII FT +AS K G + F N ++ G D+ Sbjct: 46 RKHMSFALIALIISIFTLSVKSASAEET-----TYKIGTDLTFAPFEFQNENNEYVGIDI 100 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A++ + PL +QS Q+D + T R+ + F Sbjct: 101 DLLNAIAED---QGFAVDLRPLGFDASIQGVQSNQLDGMIAGMSITEERKET--FDFSDP 155 Query: 122 TYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + G + I+S L G ++ + GT + L + + Sbjct: 156 YFDSGIQMAVAADNDSITSYEDLEGETVGAKVGTESARFLESNKDQYGYDIKL-----YD 210 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + Y A R L + ++ + + A+ +G + Sbjct: 211 DATGLYGAVRNGTVAAAFDDYPVLGYAINNGEPMKLVGEPEKGASYGFAVRKGQNQELLE 270 Query: 241 VSWTHYAMVTA 251 A + A Sbjct: 271 KFNAGLANMKA 281 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 78/243 (32%), Gaps = 15/243 (6%) Query: 18 TSFSTNASILGDIK---KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 T+ T+A +K K+ + ++ F + ++ G DVD ++ + Sbjct: 294 TTSDTDAGTSEMVKVEPKKDVYRIASDSAFAPFEFQNEDNEYVGIDVDLMNR-AAELQG- 351 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK- 133 I++ + AL Q D + T R F + G + + Sbjct: 352 -FNIEFNFIGFSGALQALDGNQADGMIAGMTITDER--RQSYDFSDSYFESGIQLAVKEG 408 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I+S L G ++ + GT + L + + ++ +++ AA + DA Sbjct: 409 NDSINSYEDLDGKTVGAKVGTESADFLIANEEKYGYS--IKYYDAADQLYAAVNGGQIDA 466 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAE 252 D + + V + S A+ + + E + + M Sbjct: 467 MMDDYPVIGYAISQGQK---LVTPIEKESGGQYGFAVKKGQNPELIQMFNEALKEMKRTG 523 Query: 253 ELG 255 E Sbjct: 524 EYD 526 >gi|306833827|ref|ZP_07466952.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] gi|304424021|gb|EFM27162.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] Length = 739 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 81/242 (33%), Gaps = 15/242 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 L T ++ + +K + +++ F +G+++G DV+ +A++ + Sbjct: 269 LTLTGDASAKATP--VKSTYKIV--MDSSFAPFEYQNDSGEYEGIDVELIKAIAEQQGFN 324 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 ++ A+Q+ Q D + T R+ F Y + Sbjct: 325 ---VEISNPGFDAALNAVQAGQADAVIAGMSITDARKEI--FDFSDAYYTSNILLAVKSG 379 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 + S S L G ++ + GT++ L+++ + F+ + + + DA Sbjct: 380 SSVKSYSDLKGLTVGAKNGTSSYTWLSEHADEYGY--TLKAFDEASTMYDSLNSGSIDAL 437 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEE 253 D L + + A+ + + E + + A+V + E Sbjct: 438 MDDE---AVLLYAIQQGRDFETPIAGEKSGEYGFAVSKGSNPELIEMFNNGLAALVESGE 494 Query: 254 LG 255 Sbjct: 495 YD 496 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 67/211 (31%), Gaps = 18/211 (8%) Query: 1 MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M +L + +FF A + +T F ++ +KG Sbjct: 1 MKHKLKALMLAIFSVFFVFGVKAQADT---------ISIVSDTAYAPFEFKDSDQTYKGI 51 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD + ++ D + A+Q+ Q D L T T R+ F Sbjct: 52 DVDIIKEVAKREGWDYEQ---TYPGFDAAVNAVQAGQADALMAGTTVTDARKKV--FTFS 106 Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y IS SQL G ++ V+ GT + L ++ A Y F+ Sbjct: 107 DTYYDTSIVIYTKSGNTAISKYSQLKGKTVGVKNGTAAQTWLDEH--ADKYDYTVKTFDT 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + ++ + + DA D + Sbjct: 165 SDLMNNSLDSGSIDAAMDDTPVVQYAINQGK 195 >gi|283478992|emb|CAY74908.1| glutamine ABC transport system, periplasmic component [Erwinia pyrifoliae DSM 12163] Length = 249 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 74/216 (34%), Gaps = 12/216 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 L +T V F + G++ GFD+D A++ + + P++ A Sbjct: 24 AEKKLVVATDTAFVPFEFKQG-GNYVGFDIDLWDAIAKQLNMEY---TLKPMDFSGIIPA 79 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG-QGFIMHKKKGISSVSQLSGASICV 150 LQ++ ID+ T R+ +AF Y G + + + L+G + V Sbjct: 80 LQTRNIDLALAGITITDERKK--AIAFSDGYYKSGLLVMVNANNDSVKGIDDLNGKVVAV 137 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++GT + + K F ++ +R DA D + T + Sbjct: 138 KSGTGSVDYAKQHIKYK----DLRQFPNIDNAYMELGTNRADAVLHDTPNILYFINTAGK 193 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + D I A +G + V+ Sbjct: 194 G-QFKAVGDSIEAQQYGIAFPKGSDDLREKVNGALK 228 >gi|221198919|ref|ZP_03571964.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD2M] gi|221205179|ref|ZP_03578195.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD2] gi|221174970|gb|EEE07401.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD2] gi|221181370|gb|EEE13772.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD2M] Length = 262 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 79/221 (35%), Gaps = 13/221 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G +GFD+D AL + + +K ++ + Sbjct: 25 KEWTTIRIGVDPTYPPFESTATDGSVQGFDIDLGNALCAKL---NAKCVWVSSSFDGLIP 81 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149 LQ+++ D++ + T R + F Y + I G + ++L+G I Sbjct: 82 GLQARKFDVILSSMAATEQR--RQQIDFTDRLYRNQTRLIARTGSGLLPDAAKLAGKRIA 139 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ GT E + + A + + ++ A R D D L Sbjct: 140 VEQGTIQETYAREKWAAAK--VEVVPYPSYDQAYADLVDGRVDGVLMDAVQGQLGFLATP 197 Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245 R ++ + A + + DT+ + ++ Sbjct: 198 RGKGFSFAGGVVYDPKIMGNGDAAGVRKADTDLRDALNRAI 238 >gi|218680404|ref|ZP_03528301.1| putative periplasmic binding ABC transporter protein [Rhizobium etli CIAT 894] Length = 245 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 75/212 (35%), Gaps = 15/212 (7%) Query: 44 LVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 FA A+G+W+G++VDF +A+ + D P+ AL + +ID++ + Sbjct: 21 YPPFASPDASGNWEGWEVDFMKAICAEAKLD---CVITPVAWDGIIPALTANKIDMIIGS 77 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLAD 162 T R + F Y + K + S + L G I VQ T + Sbjct: 78 MSITAER--LQTIDFSDKYYNSPSAIVGLKGEQFGSTPETLKGKVIGVQVATRHQAYANK 135 Query: 163 YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIIS 222 YF + +E + + R DA D A+ + + L + Sbjct: 136 YFGEAG--ATVKGYPTQDEHNNDLVSGRIDAVQTDFLAIKDFLKSEQGAAC-CDLKGTVK 192 Query: 223 KSP------LAPAIIQGDTEWYNIVSWTHYAM 248 P + +G+TE ++ A+ Sbjct: 193 DEPEILGFGKGVGLRKGETELKEKINAAIKAI 224 >gi|218507340|ref|ZP_03505218.1| ABC transporter substrate-binding protein [Rhizobium etli Brasil 5] Length = 223 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 64/203 (31%), Gaps = 8/203 (3%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 +I + + F + +A ++K G + GI + V + GFD DF + L Sbjct: 17 AIGLGLFVAFGAGQADAQSFAELKANGKIVIGIQGENPPWGFVDESNQSAGFDADFAKLL 76 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 I +++ + R L + ++D L + + + F Sbjct: 77 GDEIG---VPVEFNRVAVANRIPTLMTNKVDALIAVMGM--YPDRAKVVQFTKPYSAIDI 131 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + + I + L G I V + + + F+ A+ Sbjct: 132 ILLAKPETNIKAPEDLKGLRIAVARSSAQDTQVTKNAPE---GATIQRFDDDATAIQAFL 188 Query: 188 AHRCDAYTGDISALYALKLTNDR 210 + + DA + + ++ Sbjct: 189 SGQVDALGANNTYFLSIAKIAPD 211 >gi|13474523|ref|NP_106092.1| hypothetical protein mll5423 [Mesorhizobium loti MAFF303099] gi|14025277|dbj|BAB51878.1| mll5423 [Mesorhizobium loti MAFF303099] Length = 265 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 66/214 (30%), Gaps = 10/214 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G F +G ++GF+VD + I L + F A S Sbjct: 29 VLNVGAYPTNPPFEYKNESGIFEGFEVDIVNEAAKRIG---MTTDIADLGFQALFAATTS 85 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K+ID+ + T R +F Y G +++ + L G + V +G+ Sbjct: 86 KRIDVAISSITITAER--LKSQSFTQPYYDSDMGIATKTDSAVNTEADLKGKIVGVLSGS 143 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T E + + +A ++ + + A R DA DI + Sbjct: 144 TGESWVKAHQEADGFS-DVKGYDTQQNLLLDLSAGRVDAAVSDIPGMEYSFTKMKDLKVK 202 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + + + ++ AM Sbjct: 203 QRIKTG---EQYGLMMTKDHP-LLGKLNDALTAM 232 >gi|329116273|ref|ZP_08244990.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] gi|326906678|gb|EGE53592.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] Length = 724 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 64/210 (30%), Gaps = 15/210 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V +L ++ I +K +T F ++ +KG D Sbjct: 1 MKNKLKVFMLAILSTTLLFGG--------IASAETIKIVSDTAYAPFEYKDSDQVYKGID 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ D + A+QS Q D L T T R+ F Sbjct: 53 VDIINEVAKRQNWDY---KMTYPGFDAAVNAVQSGQADALMAGTTITEERQKV--FNFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K IS SQL G ++ V+ GT ++ L + K F+ + Sbjct: 108 PYYDTKIVIATKKAHPISKYSQLKGKTVGVKNGTASQTFLDQNKDKYGFK--VKTFDTGD 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + A D + N Sbjct: 166 LMYNSLATGSVQAVMDDQPVIQFAINQNQD 195 Score = 90.9 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 65/226 (28%), Gaps = 18/226 (7%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 + TS + +K+ + ++ F G + G D+D +A++ Sbjct: 250 VSTTLTSTGDANNKAKPVKETYKIVA--DSSFAPFEFQNGKGKYVGIDMDLIKAIAKQ-- 305 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 KI+ A+QS Q D T R+ F Y + Sbjct: 306 -QGFKIEVSNPGFDAALNAVQSGQADAAIAGMSITDTRKEI--FDFSDSYYTSNILLGVK 362 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I + L G ++ + GT + L + F+ + + + Sbjct: 363 SGNSIKAYKDLKGTTVGAKKGTASYDFLDKI--KDKYNFKLKAFDEASSMYDSLNSGSIK 420 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSP---LAPAIIQGDT 235 A D + L + I+ P A+ +G Sbjct: 421 ALMDDEAILKYSIQQGRK------FDTPINGEPSGEYGFAVKKGTN 460 >gi|27468911|ref|NP_765548.1| ABC transporter (periplasmic amino acid-binding protein) [Staphylococcus epidermidis ATCC 12228] gi|27316459|gb|AAO05634.1|AE016750_239 ABC transporter (periplasmic amino acid-binding protein) [Staphylococcus epidermidis ATCC 12228] Length = 262 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 70/214 (32%), Gaps = 15/214 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGD---IKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 K + I+ L+ + + +++ + K + L+ G F G+ Sbjct: 2 KRLLLCIVALVFVLAACGNNSSNNKDNQSSSKDKDTLRVGTEGTYAPFTYHNKKDQLTGY 61 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D +A++ + K+++ + F L + + D+++ RE F Sbjct: 62 DIDVIKAVAKE---ENLKLKFNETSWDSMFAGLDAGRFDVIANQVGVNKDREKKYK--FS 116 Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + ++ +K I+S + + G + Q T+ LA A + Sbjct: 117 EPYTYSSAVLVVRENEKDITSFNDVKGKKLA-QTFTSNYGQLAKDKGA-----DVTKVDG 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 + + R D D + + Sbjct: 171 FNQSMDLLLSKRVDGTFNDSLSYLDYRKQKPNAK 204 >gi|289168045|ref|YP_003446314.1| ABC transporter membrane spanning permease-glutamine transport [Streptococcus mitis B6] gi|288907612|emb|CBJ22449.1| ABC transporter membrane spanning permease-glutamine transport [Streptococcus mitis B6] Length = 721 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 66/210 (31%), Gaps = 17/210 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L L +F I K +K +T F ++ +KG D Sbjct: 1 MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + IQ A+Q+ Q D + T RE Sbjct: 51 VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K IS QLSG ++ V+ GT + L + F+ + Sbjct: 106 TYYDTKVVIATTKAHKISQYDQLSGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + A DA D + Sbjct: 164 LMNNSLSAGSIDAMMDDKPVIEYAINQGQD 193 Score = 97.1 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 36/232 (15%), Positives = 71/232 (30%), Gaps = 19/232 (8%) Query: 1 MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +T A L I + ++ F ++ Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G D++ +A++ + I+ + A+Q+ Q D + T R+ + Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEIINPGFDAAINAVQAGQADGIIAGMSVTDARKAT-- 343 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y + + I+S L G ++ V+ GT ++ L + + Sbjct: 344 FDFSDSYYTANTILGVKESSTIASYEDLKGKTVGVKNGTASQTFLTENQSKYGY--QIKT 401 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 F + + DA D L + L I SP+ Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQK------LKTPIPGSPIG 447 >gi|254513061|ref|ZP_05125127.1| putative carboxycyclohexadienyl dehydratase [Rhodobacteraceae bacterium KLH11] gi|221533060|gb|EEE36055.1| putative carboxycyclohexadienyl dehydratase [Rhodobacteraceae bacterium KLH11] Length = 256 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 81/246 (32%), Gaps = 13/246 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M + + L ++ + S L ++ G LK G + +KG+ Sbjct: 1 MNTFLKAAATAALGLVLSTAAQAQSALNEVLDSGVLKVGTTGDWNPMSLRDPATNSYKGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D L++ + + ++Y+P + K + + + L+ + + R G + Sbjct: 61 DIDIMNELAADLGVE---VEYVPTDWKTLVNGVVAGKYH-LTGSASISPPRMKVAGFSES 116 Query: 120 PITYFDGQGFIMHKKKGISSV--SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 I + K G + GTT E + ++F V E Sbjct: 117 YIAVELFPYTLKDKADKFDGYASINQPGVRVATTLGTTFEKRVREWFP----NADIKVVE 172 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 A R D + L+ P V S SP+A + QGD W Sbjct: 173 APARGFQEVIAGRADVFITSNIEGSTLEAKF--PVVRVKNAGPRSPSPIAMILPQGDQIW 230 Query: 238 YNIVSW 243 N V+ Sbjct: 231 INYVNN 236 >gi|170703473|ref|ZP_02894239.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170131617|gb|EDT00179.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 262 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 37/253 (14%), Positives = 77/253 (30%), Gaps = 24/253 (9%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M ++ L + + L+ G+ F NGD +G Sbjct: 1 MKHGHTLKLAFALACALGTGAAFADGQT---------LRFGLEAQYPPFESKAPNGDLQG 51 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D A+ + +++ + AL+ ++ D ++ + T R + F Sbjct: 52 FDIDVGNAVCQSA---KLSCKWVETSFDGLIPALKGRKFDAINSAMNATEQR--RQAIDF 106 Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 I Y I G + + L G + V + E +++ + + ++ Sbjct: 107 TTIIYRVPTQLIARTGSGLLPTPEALKGKRVGVLQASIQETYAKAHWEPAGVS--IVAYQ 164 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQ 232 + A A R DA A L+ + + +A + + Sbjct: 165 DQNQAYADLVAGRLDATLVLAPAGQRGFLSRPDGKGFSFVGQPVRDDKILGSGIAFGLRK 224 Query: 233 GDTEWYNIVSWTH 245 GD + Sbjct: 225 GDDALKAKLDAAI 237 >gi|47092054|ref|ZP_00229847.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes str. 4b H7858] gi|226223465|ref|YP_002757572.1| Glutamine ABC transporter (binding and transport protein) [Listeria monocytogenes Clip81459] gi|254823885|ref|ZP_05228886.1| glutamine ABC transporter [Listeria monocytogenes FSL J1-194] gi|254852338|ref|ZP_05241686.1| glutamine ABC transporter [Listeria monocytogenes FSL R2-503] gi|254931228|ref|ZP_05264587.1| glutamine ABC transporter [Listeria monocytogenes HPB2262] gi|254993068|ref|ZP_05275258.1| Glutamine ABC transporter (binding and transport protein) [Listeria monocytogenes FSL J2-064] gi|300765789|ref|ZP_07075764.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes FSL N1-017] gi|47019494|gb|EAL10234.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes str. 4b H7858] gi|225875927|emb|CAS04631.1| Putative Glutamine ABC transporter (binding and transport protein) [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605645|gb|EEW18253.1| glutamine ABC transporter [Listeria monocytogenes FSL R2-503] gi|293582776|gb|EFF94808.1| glutamine ABC transporter [Listeria monocytogenes HPB2262] gi|293593110|gb|EFG00871.1| glutamine ABC transporter [Listeria monocytogenes FSL J1-194] gi|300513483|gb|EFK40555.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes FSL N1-017] gi|328467121|gb|EGF38211.1| Glutamine ABC transporter (binding and transport protein) [Listeria monocytogenes 1816] gi|328475546|gb|EGF46305.1| Glutamine ABC transporter (binding and transport protein) [Listeria monocytogenes 220] Length = 480 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 53/297 (17%), Positives = 95/297 (31%), Gaps = 22/297 (7%) Query: 1 MYK----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K ++I C+ FT NA + G +T F + +G+ Sbjct: 1 MKKFSRFILMMAIACVAAFIFTGNGLNAKAAEE-----TYLIGTDTTFAPFEF-EKDGEH 54 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D+D +A++ K + + AL++ Q+D + T R+ Sbjct: 55 VGIDMDILKAIAKD---QNFKYEIKAMGFNAAVQALEANQVDGVIAGMSITDERK--QKF 109 Query: 117 AFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + G I+ I + L G + V+ GT + +V Sbjct: 110 DFSDPYFDSGVVMGILKDNDEIKTYDDLKGKKVAVKTGTEGYAFAEKI--KDKYDFDIVV 167 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ ++ + A D L T + I+ + + A+ +G Sbjct: 168 FDDSAQMYDDVKTRNSVACFDDYPVLAYGVQT---GNGLKIVTEKEKGNSYGFAVNKGKN 224 Query: 236 EWYNIVSWTHYAMVTA-EELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291 + + A E +N + N + F+GI KSS GL Sbjct: 225 QELLEKFNAGLVNIKASGEYDKILENYLGKNAIKENTTEKGFMGIIKSSWPALLSGL 281 >gi|329295892|ref|ZP_08253228.1| family 3 extracellular solute-binding protein [Plautia stali symbiont] Length = 273 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 81/256 (31%), Gaps = 15/256 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGF 59 M K +S + +L +S ++ IK++G L I G Sbjct: 1 MKK-LLLSAISAALLLQSSAWAEIAVPASIKEKG-LTVTIMPNYPPMDFKDPPTNQLSGV 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D + +A+ + + + + ++ A+ +K++D++ T R+ + F Sbjct: 59 DYELGQAIGEKLGVK---VNWQEIAFEQMVNAVVTKRVDLVMFGMTDTKERQKV--VNFI 113 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH-----NMKYHPI 174 Q + + + I+S + L G + TT +A + KAH + Sbjct: 114 DYFKTGPQFYTLAARSDINSATDLCGKRVGTSRRTTFPQEIATWSKAHCEAAGKPAIIVV 173 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E + R R D L + L S A+ + Sbjct: 174 GAEGTADARTQLRQRRLDGAVQGSETLPYIINLEK--GTFKPLDKAFSFQYTGMALGKDA 231 Query: 235 TEWYNIVSWTHYAMVT 250 E + AM+ Sbjct: 232 GELTTAIQAAINAMIA 247 >gi|22537750|ref|NP_688601.1| amino acid ABC transporter, substrate-binding protein [Streptococcus agalactiae 2603V/R] gi|25011699|ref|NP_736094.1| hypothetical protein gbs1659 [Streptococcus agalactiae NEM316] gi|76788500|ref|YP_330228.1| polar amino acid ABC transporter polar amino acid-binding protein [Streptococcus agalactiae A909] gi|76798456|ref|ZP_00780694.1| amino acid ABC transporter substrate-binding protein [Streptococcus agalactiae 18RS21] gi|77405810|ref|ZP_00782894.1| amino acid ABC transporter, substrate-binding protein [Streptococcus agalactiae H36B] gi|77411913|ref|ZP_00788244.1| amino acid ABC transporter, substrate-binding protein [Streptococcus agalactiae CJB111] gi|22534641|gb|AAN00474.1|AE014265_3 amino acid ABC transporter, substrate-binding protein [Streptococcus agalactiae 2603V/R] gi|24413239|emb|CAD47318.1| Unknown [Streptococcus agalactiae NEM316] gi|76563557|gb|ABA46141.1| polar amino acid uptake (PAAT) family ABC transporter, polar amino acid-binding protein [Streptococcus agalactiae A909] gi|76586190|gb|EAO62710.1| amino acid ABC transporter substrate-binding protein [Streptococcus agalactiae 18RS21] gi|77162010|gb|EAO72990.1| amino acid ABC transporter, substrate-binding protein [Streptococcus agalactiae CJB111] gi|77175597|gb|EAO78382.1| amino acid ABC transporter, substrate-binding protein [Streptococcus agalactiae H36B] gi|319745515|gb|EFV97817.1| polar amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus agalactiae ATCC 13813] Length = 285 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 77/256 (30%), Gaps = 14/256 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K + ++ L + + S S +IKK G LK L + + Sbjct: 1 MKKTILLGLVGLSAMTLAACSNGQSSKETTWDNIKKDGVLKVATPATLYPTSYYDDHKKL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G+++D + + K++++ + E F ++ S ++D+ N D T R Sbjct: 61 TGYEIDMMK---AIAKKLKIKVKFVEVGVAESFTSVDSGKVDVAVNNFDTTPER--LKKY 115 Query: 117 AFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + G I+ + LS G + K + Sbjct: 116 NFSQPYKYSVGGMIVRADGSSKITAKDLSDWKGKKAGGGAGTQYMK-IAKQQGAEPVIYD 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDIS--ALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQ 232 + R D D + +T P V + D+ + + + + Sbjct: 175 NVTNDVYLRDVSTGRTDFIPNDYYTQVIAVKYVTKQYPDIKVKMGDVKYNPTEQGIVMSK 234 Query: 233 GDTEWYNIVSWTHYAM 248 D + M Sbjct: 235 KDKSLKTKIDAAIKDM 250 >gi|317497562|ref|ZP_07955880.1| bacterial extracellular solute-binding protein, family 3 [Lachnospiraceae bacterium 5_1_63FAA] gi|316895121|gb|EFV17285.1| bacterial extracellular solute-binding protein, family 3 [Lachnospiraceae bacterium 5_1_63FAA] Length = 276 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 83/252 (32%), Gaps = 27/252 (10%) Query: 1 MYKDFFVSILCLIILFFTSFST----------------NASILGDIKKRGFLKCGINTGL 44 M K ++ +I + A + K LK G++ + Sbjct: 1 MKKILASLMMVGLIFCLGGCNVPWMKQKTEKTKATKVIQADKVEGTMKGMKLKVGVSNDM 60 Query: 45 VGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 F+ + GFD+D LS + + +N K+ +++K++D+ Sbjct: 61 APFSYYDSEQKKITGFDIDLLDKLSEYLGFEYELYP---MNMKKLEQKIKNKELDLAIAG 117 Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163 T R+ +F Y ++ K I+ +++ + V GT++ DY Sbjct: 118 ISITDERQR--EFSFTDTYYETYLQIVVRKDSQITDRKEITEKKVGVVEGTSSAQYAEDY 175 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 N ++ + ++ DA D + + + + +L + ++ Sbjct: 176 LSEDN---KITYYKNITKVWNDLEKGTIDATIYDTTGIQNYMQEHADNTNLSVLNEQLNS 232 Query: 224 SP--LAPAIIQG 233 ++G Sbjct: 233 EESNYGIMFVKG 244 >gi|228477049|ref|ZP_04061687.1| glutamine ABC transporter permease protein [Streptococcus salivarius SK126] gi|228251068|gb|EEK10239.1| glutamine ABC transporter permease protein [Streptococcus salivarius SK126] Length = 732 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 66/210 (31%), Gaps = 15/210 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L ++ +FF + ++ + +T F ++ +KG D Sbjct: 1 MKKKLLTLFLSVMSVFFVFGAKVSAE--------TISVVSDTAYAPFEFKDSDQTYKGID 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ D + A+QS Q D L T T R+ F Sbjct: 53 VDIINEVAKRKNWD---VNQTFPGFDAAVNAVQSGQADALMAGTTVTDARKKV--FTFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y +S QL G ++ V+ GT ++ L + F+ + Sbjct: 108 TYYDTSIVIYTRSSDKVSDYKQLKGKTVGVKNGTASQTWLDKNASKYGF--TVKTFDTSD 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + + DA D + Sbjct: 166 LMNNSLDSGSVDAAMDDTPVVKYAIGQGKD 195 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 71/219 (32%), Gaps = 11/219 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + +++ F +G + G DVD A++ + ++ A Sbjct: 274 AKETYTISMDSSFAPFEYQNGSGKYVGIDVDIINAIAK---NQGFNVKLTNPGFDASLNA 330 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 +QS Q D + T R+ F Y + K + S L G ++ + Sbjct: 331 VQSSQADAVLAGMTITDARK--QIFDFSDPYYTSNIRLAVAKGSKVKSYKDLKGKTVGAK 388 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 GT++ L D+ + ++ + + + DA D L + Sbjct: 389 NGTSSYSWLEDHAGEYGF--TVRAYDEASTMYDSLNSGSIDALMDDE---AVLLYAIQQG 443 Query: 212 SEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMV 249 + I+ + A+ + + E + + A+V Sbjct: 444 RNFTTPIEGIATGEVGFAVKKGTNPELIEMFNNGLAAIV 482 >gi|282856045|ref|ZP_06265332.1| extracellular solute-binding protein family 3 [Pyramidobacter piscolens W5455] gi|282586127|gb|EFB91408.1| extracellular solute-binding protein family 3 [Pyramidobacter piscolens W5455] Length = 249 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 70/225 (31%), Gaps = 11/225 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 R L + + G+ GFD++ ++ + +++L + A Sbjct: 26 DRDTLVAATESTYPPYESRNEKGELVGFDIELTETVAKKLGKK---VEWLDMPFDSLIPA 82 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 L S ++D+++ T R + F F+ + L+G + VQ Sbjct: 83 LMSGKVDLVAAGMSATPERAK--RVNFSAPYEISFSAFVTGIENPPQDTDALAGKIVAVQ 140 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND-R 210 GT + + F F++ ++ R A DI D Sbjct: 141 IGT-----VQENFARSLGNVEVKTFQKFDDCVREVVLGRAAATLMDIPVAKQYVQAKDFA 195 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 V I+ + A A+ + D V+ M EL Sbjct: 196 GKVTVAFNKQITGADKAIAMPKQDEALTAAVNGVIEEMDKNGELA 240 >gi|148253604|ref|YP_001238189.1| ABC transporter substrate-binding protein [Bradyrhizobium sp. BTAi1] gi|146405777|gb|ABQ34283.1| amino acid ABC transporter substrate-binding protein, PAAT family [Bradyrhizobium sp. BTAi1] Length = 273 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 83/256 (32%), Gaps = 17/256 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M + F+S L + + A + +IK+ G LK +N+ + KG Sbjct: 1 MRRSLFISF---AALASLASAGAAELPAEIKQSGTLKLTVNSTYAPMEYHDPATNELKGL 57 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D L+ + I + E +LQ+K+ D + R F Sbjct: 58 DIDLANELAKRLGVK---IAWSETPFAELIPSLQTKRADFIISGISDRASR--RETADFV 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA-----HNMKYHPI 174 G F + + V L G I T+ + + KA + Sbjct: 113 D-YLVTGPQFFVLAESDAKVVIDLCGRKIGTTRSTSFPAEIEKWSKATCEASGKPAAQYV 171 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 E ++ + R DA L + ++ I+ + I+ + + Sbjct: 172 PGENSIDVRNQLKQGRIDAAVQGSETLP--YAQSQEAGKYRIVGEPIAFGYQGIMFRKDN 229 Query: 235 TEWYNIVSWTHYAMVT 250 + ++++ AM+ Sbjct: 230 AGFRDLITDQLKAMIA 245 >gi|325919298|ref|ZP_08181338.1| cyclohexadienyl dehydratase [Xanthomonas gardneri ATCC 19865] gi|325550230|gb|EGD21044.1| cyclohexadienyl dehydratase [Xanthomonas gardneri ATCC 19865] Length = 276 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 83/251 (33%), Gaps = 11/251 (4%) Query: 8 SILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66 ++L +++ ++ + AS L + + G L+ ++ ++A+G ++G D+ ++ Sbjct: 17 ALLAFLLICGSAHAAEPASRLDAVLRSGVLRVCTTGDYRPYSLLRADGHFEGSDIALAQS 76 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 L +++ +++Q++ + + L + + DI TL R+ + Sbjct: 77 LGASLG---ARVQFVRTSWPQLMPDLLADRCDIAVGGISVTLQRQRQASFSTVLDVDGKI 133 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + S++QL+ + V T E N +F I Sbjct: 134 PLVRCADQTRYRSIAQLNRPDVRVIEPPGGTNEAFARRELPRAN----LRLFADNTTIFQ 189 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R D D S + + A + + D W V Sbjct: 190 ELVDQRADVMITDASEALYQQARLPTLCAIAPEQALQYGE-KAFLLPRDDPAWKAYVDQW 248 Query: 245 HYAMVTAEELG 255 + + E Sbjct: 249 LHLSKASGEYA 259 >gi|242243788|ref|ZP_04798232.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus epidermidis W23144] gi|242232756|gb|EES35068.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus epidermidis W23144] gi|319400135|gb|EFV88370.1| L-cystine-binding protein tcyA [Staphylococcus epidermidis FRI909] Length = 262 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 70/214 (32%), Gaps = 15/214 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGD---IKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 K + I+ L+ + + +++ + K + L+ G F G+ Sbjct: 2 KRLLLCIVALVFVLAACGNNSSNNKDNQSSSKDKDTLRVGTEGTYAPFTYHNKKDQLTGY 61 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D +A++ + K+++ + F L + + D+++ RE F Sbjct: 62 DIDVIKAVAKE---ENLKLKFNETSWDSMFAGLDAGRFDVIANQVGVNKDREKKYK--FS 116 Query: 120 PITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + ++ + + I+S + + G + Q T+ LA A + Sbjct: 117 EPYTYSSAVLVVRENEKGITSFNDVKGKKLA-QTFTSNYGQLAKDKGA-----DITKVDG 170 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 + + R D D + + Sbjct: 171 FNQSMDLLLSKRVDGTFNDSLSYLDYRKQKPNAK 204 >gi|168491161|ref|ZP_02715304.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC0288-04] gi|183574490|gb|EDT95018.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC0288-04] Length = 721 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 65/210 (30%), Gaps = 17/210 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L L F I K +K +T F ++ +KG D Sbjct: 1 MKKKFLAFLLILFPTFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + IQ A+Q+ Q D + T RE Sbjct: 51 VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K IS QL+G ++ V+ GT + L + F+ + Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + A DA D + Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193 Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%) Query: 1 MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +T A L I + ++ F ++ Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G D++ +A++ + I+ A+Q+ Q D + T R+ + Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y + + I+S L G ++ V+ GT ++ L + + K Sbjct: 344 FDFSESYYTANTILGVKESSNIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401 Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223 F + + DA D + P + + Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPISGTPIGETAFA 452 >gi|296125972|ref|YP_003633224.1| extracellular solute-binding protein family 3 [Brachyspira murdochii DSM 12563] gi|296017788|gb|ADG71025.1| extracellular solute-binding protein family 3 [Brachyspira murdochii DSM 12563] Length = 254 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 88/252 (34%), Gaps = 23/252 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL------GDIKKRGFLKCGINTGLVGFAEVKANG 54 M + ++ L + + + S IK + GI+ F + NG Sbjct: 1 MKRILIFIMIISSALLSSCSNNSKSSNASNTAEETIKDP--IYVGIDVDFPPFGYLD-NG 57 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 + GFD D A+ +++ + ALQ+K+ID + T R+ Sbjct: 58 NIAGFDYDIMSE---ALKLAGINGEFVHMQFSGLLPALQAKKIDAIVAGMTVTEERKQF- 113 Query: 115 GLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + F Y Q ++HK IS+ L+G +I V GTT + +++ + Sbjct: 114 -VNFTEPYYVSSQVMLVHKDDNTISTFDDLAGKNIGVVIGTTGDTVMSER-----TDINV 167 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 F+ A ++ + A D K + ++ + A A+ + Sbjct: 168 EKFDTGAAAVLALKSKKISAVVFDKEPC---KNFAKYNDDIKLIESDAIEEDYAIAVRKE 224 Query: 234 DTEWYNIVSWTH 245 DT ++ Sbjct: 225 DTLLLEKINEGL 236 >gi|168484864|ref|ZP_02709809.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC1873-00] gi|172041971|gb|EDT50017.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC1873-00] Length = 721 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 65/210 (30%), Gaps = 17/210 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L L F I K +K +T F ++ +KG D Sbjct: 1 MKKKFLAFLLILFPTFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + IQ A+Q+ Q D + T RE Sbjct: 51 VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K IS QL+G ++ V+ GT + L + F+ + Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + A DA D + Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193 Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%) Query: 1 MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +T A L I + ++ F ++ Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G D++ +A++ + I+ A+Q+ Q D + T R+ + Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y + + I+S L G ++ V+ GT ++ L + + K Sbjct: 344 FDFSESYYTANTILGVKESSNIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401 Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223 F + + DA D + P + + Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPISGTPIGETAFA 452 >gi|324992737|gb|EGC24657.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK405] Length = 729 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 58/206 (28%), Gaps = 16/206 (7%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F +L L F + A +K +T F ++ +KG DVD Sbjct: 12 FLAVLLTLFPFFALGVTAQADT---------VKIVSDTAYAPFEFKDSDQTYKGIDVDII 62 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ D A+Q+ Q D + T RE Y Sbjct: 63 NKVAEIKGWDIDT---SFPGFDAAVNAVQAGQADAIMAGMTKTSEREKV--FTMSDTYYD 117 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 K IS QL G + V+ GT + L + F+ + + Sbjct: 118 TKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKN--KDKYDFTLKTFDTGDLMYN 175 Query: 185 AYRAHRCDAYTGDISALYALKLTNDR 210 + A DA D + Sbjct: 176 SLSAGDVDAVMDDQPVIEYAINQGQN 201 Score = 89.4 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 28/236 (11%), Positives = 70/236 (29%), Gaps = 14/236 (5%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 + ++ F + + G D++ +A++ ++ ++ Sbjct: 277 KDKYIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QGFTVEVTNPGFDAAINSV 333 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152 Q+ Q D + T R+ + + Y + I S +L G ++ V+ Sbjct: 334 QTGQADGIIAGMSVTDARKKT--FDYSDPYYTANSILAVKDSSNIKSYEELKGKTVGVKT 391 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT ++ L + + F + + A D + + Sbjct: 392 GTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVMDDEPVVKYAIKQGKK-- 447 Query: 213 EHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 L I +P A ++ + + +E G Q+ +++ Sbjct: 448 ----LKTPIEGTPSGQVAFAVKKGSNPELIEMFNNGLANLKESGKYQEILDKYLAS 499 >gi|307544137|ref|YP_003896616.1| ABC transporter periplasmic protein [Halomonas elongata DSM 2581] gi|307216161|emb|CBV41431.1| ABC-type transport system periplasmic substrate-binding protein [Halomonas elongata DSM 2581] Length = 255 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 33/252 (13%), Positives = 75/252 (29%), Gaps = 23/252 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + +SI L + +++ ++ G++ A+G+ GFD Sbjct: 1 MKLNKLLSIGVLGAGMIAGVANA-----EVRD---IRIGVDVPYEPMEYRTADGELTGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ A+ I + +++ L +++ D + + R + F Sbjct: 53 IELGNAMCEEIGIE---CEWVVQGWDGIIPGLMARKYDAIMSSMTINDKR--REQVLFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQ--LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 + + I + L SI VQ GT + + D + + Sbjct: 108 PYFTPPSAWFAPADSEIETPDAETLEDMSIGVQRGTLQDNYVTDMY---GDVADVNRYAT 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQG 233 +++ + R D D + L ++ + I A + Sbjct: 165 ADDMVLDMDSGRLDIVFLDFPVGKSTLLDSEAGDYKTVGEQITEPKQYFGDGFGIAFRKR 224 Query: 234 DTEWYNIVSWTH 245 D E + Sbjct: 225 DEELAAAFNEAL 236 >gi|325142043|gb|EGC64474.1| L-cystine-binding protein tcyA precursor [Neisseria meningitidis 961-5945] Length = 239 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 27/188 (14%), Positives = 57/188 (30%), Gaps = 10/188 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82 + S++ I +G + G F +G G+DV+ RA++ + +++ Sbjct: 2 SGSLIERINNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVK---VEFKE 58 Query: 83 LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142 L++ + D+++ T E + G + I S+ Sbjct: 59 TQWDSMMAGLKAGRFDVVANQVGLT-SPERQATFDKSDPYSWSGAVLVARNDSNIKSIDD 117 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 + G + KA + + + + R DA D A+ Sbjct: 118 IKGVKTAQSLTSNYGE------KAKAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVL 171 Query: 203 ALKLTNDR 210 N Sbjct: 172 DYLKKNPN 179 >gi|317014350|gb|ADU81786.1| amino acid ABC transporter [Helicobacter pylori Gambia94/24] Length = 257 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 33/251 (13%), Positives = 75/251 (29%), Gaps = 14/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +S L L+I F F +S+ + + + G F G G+D Sbjct: 1 MKK---ISCLLLVISLFGGFLNASSLYEKLVNKETISVGTEGIYPPFTYHNKEGKLTGYD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R L+ + I++ + L+S + D+++ T ++ Sbjct: 58 VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQAAFDKSL 113 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G ++ K I + + G +T A + + + Sbjct: 114 PYSYSGTIMLVRKDENRIKGIEDIRGLKAANTLSSTYGEI------AFKYDAQIVSVDSM 167 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R D A+ T+ + + I + + Sbjct: 168 AQALLLVAQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALE 227 Query: 240 IVSWTHYAMVT 250 +++ ++ Sbjct: 228 LINQAMQRLIN 238 >gi|152970648|ref|YP_001335757.1| amino acid-binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955497|gb|ABR77527.1| amino acid-binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 245 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 30/235 (12%), Positives = 74/235 (31%), Gaps = 16/235 (6%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 +I A G F + +GFD+D +A++ A Sbjct: 1 MIAALTAVGQAAAETY---------TVGSGGTYRPFEFENSQKQLEGFDIDIIKAIAKAE 51 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 D ++ + + F L + DI+ T R+ + F + Q ++ Sbjct: 52 GFD---VKLVNTPWEGIFATLNTGDRDIIISGITITDKRKQM--VDFSAPYFPAEQSIVV 106 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 + + S++ L + V +T ++ +++ + F+ + Sbjct: 107 AQDSQVDSLAALKNEKVGVVNSSTGDIVVSEVLGKN--STAIKRFDNTPLMLQELFEDGV 164 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 A GD+ + + ++ + A+ +G++E ++ Sbjct: 165 SAAVGDVGVVKYYIKQHPEKQFKLVPDAKFERQYFGIAVAKGNSELLGKINAGLQ 219 >gi|77414381|ref|ZP_00790536.1| amino acid ABC transporter, substrate-binding protein [Streptococcus agalactiae 515] gi|77159571|gb|EAO70727.1| amino acid ABC transporter, substrate-binding protein [Streptococcus agalactiae 515] Length = 285 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 77/256 (30%), Gaps = 14/256 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K + ++ L + + S S +IKK G LK L + + Sbjct: 1 MKKTILLGLVGLSAMTLAACSNGQSSKETTWDNIKKDGVLKVATPATLYPTSYYDDHKKL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G+++D + + K++++ + E F ++ S ++D+ N D T R Sbjct: 61 TGYEIDMMK---AIAKKLKIKVKFVEVGVAESFTSVDSGKVDVAVNNFDTTPER--LKKY 115 Query: 117 AFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + G I+ + LS G + K + Sbjct: 116 NFSQPYKYSVGGMIVRADGSSKITAKDLSDWKGKKAGGGAGTQYMK-IAKQQGAEPVIYD 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDIS--ALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQ 232 + R D D + +T P V + D+ + + + + Sbjct: 175 NVTNDVYLRDVSTGRTDFIPNDYYTQVIAVKYVTKQYPDIKVKMGDVKYNPTEQGIVMSK 234 Query: 233 GDTEWYNIVSWTHYAM 248 D + M Sbjct: 235 KDKSLKTKIDAAIKDM 250 >gi|327460181|gb|EGF06518.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1057] Length = 729 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 58/206 (28%), Gaps = 16/206 (7%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F +L L F A +K +T F ++ +KG DVD Sbjct: 12 FLAVLLTLFPFFALGARAQADT---------VKIVSDTAYAPFEFKDSDQTYKGIDVDII 62 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 ++ D I A+Q+ Q D + T RE Y Sbjct: 63 NKVAEIKGWD---IDMSFPGFDAAVNAVQAGQADAIMAGMTKTSEREKV--FTMSDTYYD 117 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 K IS QL G + V+ GT + L + F+ + + Sbjct: 118 TKVVIATTKANTISKYEQLKGKKVGVKTGTAAQRFLEKNKDKYGF--TLKTFDTGDLMYN 175 Query: 185 AYRAHRCDAYTGDISALYALKLTNDR 210 + A DA D + Sbjct: 176 SLSAGDVDAVMDDQPVIEYAINQGQN 201 Score = 89.0 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 28/241 (11%), Positives = 70/241 (29%), Gaps = 14/241 (5%) Query: 33 RGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLAL 92 + ++ F + + G D++ +A++ ++ ++ Sbjct: 277 KDKYIIASDSSFAPFVFQDDSNQYTGIDMELIKAIAKD---QGFTVEVTNPGFDAAINSV 333 Query: 93 QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQA 152 Q+ Q D + T R+ + + Y + I S +L G ++ V+ Sbjct: 334 QTGQADGIIAGMSVTDARKKT--FDYSDPYYTANSILAVKDSSNIKSYEELKGKTVGVKT 391 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT ++ L + + F + + A D + + Sbjct: 392 GTASQTFLEENKSKYGYS--IKTFSDAASMYDSLNTGSVAAVMDDEPVVKYAIKQGKK-- 447 Query: 213 EHVILPDIISKSPLA-PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNP 271 L I +P A ++ + + +E G Q+ +++ Sbjct: 448 ----LKTPIEGTPSGQVAFAVKKGSNPELIEMFNNGLANLKESGKYQEILDKYLASEEKE 503 Query: 272 D 272 Sbjct: 504 S 504 >gi|157692905|ref|YP_001487367.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus SAFR-032] gi|157681663|gb|ABV62807.1| spore amino acid ABC superfamily ATP binding cassette transporter, binding protein [Bacillus pumilus SAFR-032] Length = 254 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 73/224 (32%), Gaps = 12/224 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 L + F + GFDVD AL+ ++ ++ A Sbjct: 32 DDKTLVMATSADYPPFESKDGD-KIVGFDVDLATALAKKNGYK---LEIQDMDFASLVSA 87 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 L++ + DI+ T R+ L F + Y + K G+ + L ++ VQ Sbjct: 88 LKTNKADIVLAGMTPTEKRKK--QLDFSDVYYNAKNLVVSKKSSGMKTEKDLKDKTVGVQ 145 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 G+ + K +N+K ++ +I +A R DA + + Sbjct: 146 LGSIQQDEANGLQKKYNLKVEDR--NKISDIIQEIKAGRFDAAIIEDKVAAGY---LKKE 200 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + S A A + +++ + + M EL Sbjct: 201 KDFQAFGLNSSNEGSAIAFKK-NSDLTAKFNKSLKEMQDNGELD 243 >gi|91788587|ref|YP_549539.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91697812|gb|ABE44641.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 255 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 74/243 (30%), Gaps = 18/243 (7%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 + L L + L G + FA + D G+DVD + Sbjct: 7 IAATAGLFTLALGGVHAQNT---------ELVVGSSATYRPFAYESPSKDIVGYDVDMIK 57 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 A++ KI+ + F AL + +D++ R+ F + Sbjct: 58 AIAQKAG---LKIKIVNTPWTGIFAALNNGDLDLVISGVTINDKRK--QSYDFSTPYFEA 112 Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185 Q +H + L+G I V G+T + + F N FE + + Sbjct: 113 RQLLAVHSNSTAKGLKDLAGKKIGVVTGSTGDDMASREFGKTNPD--IRRFESTPVVISE 170 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + DA GD + + + K + QG+ + ++ Sbjct: 171 LANNGLDAAIGDNGVIAFRAQ--EHKQLKTVSDPAFPKEYFGIVVKQGNKALLDKLNAGL 228 Query: 246 YAM 248 A+ Sbjct: 229 AAV 231 >gi|38046583|gb|AAR09153.1| arginine-binding periplasmic protein 2 [Mannheimia glucosida] Length = 238 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 73/257 (28%), Gaps = 31/257 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +LF + A + + + F G+ GFD Sbjct: 1 MKKTLL------ALLFGCVVTAQAQDIKFVME---------PSYPPFEMTDEKGEIIGFD 45 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ + + + +L+ KQ D T R+ + F Sbjct: 46 VDIANAICKEM---NANCTFHSQPFDSLIQSLKQKQFDAAISGMGITEPRKK--QVLFSE 100 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + FI K + V +I VQ GTT + LA K +N + + Sbjct: 101 PYFPSSAAFIAKKDIDFAKVK-----TIGVQNGTTYQHYLAKEKKEYN----VKSYASYQ 151 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA GD+ L + ++ I L A + Sbjct: 152 NAILDVQNGRIDAIFGDVPVLAEMARKHEGLDFVGEKINNPSYFGDGLGIATHLKNQALV 211 Query: 239 NIVSWTHYAMVTAEELG 255 + + E Sbjct: 212 EQFNAALKTIKENGEYQ 228 >gi|307704942|ref|ZP_07641833.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus mitis SK597] gi|307621556|gb|EFO00602.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus mitis SK597] Length = 721 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L L +F I K +K +T F ++ +KG D Sbjct: 1 MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + IQ A+Q+ Q D + T RE Sbjct: 51 VDIISKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K IS QL+G ++ V+ GT + L + F+ + Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTSD 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + A DA D + Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193 Score = 96.3 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 16/231 (6%) Query: 1 MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +T A L I + ++ F ++ Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G D++ +A++ + I+ A+Q+ Q D + T R+ + Sbjct: 289 YTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y + + I+S L G ++ V+ GT ++ L + + K Sbjct: 344 FDFSESYYTANTILGVKESSTIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYK--IKT 401 Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223 F + + DA D + P + + Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPIAGTPIGETAFA 452 >gi|295676202|ref|YP_003604726.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. CCGE1002] gi|295436045|gb|ADG15215.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. CCGE1002] Length = 264 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 84/246 (34%), Gaps = 20/246 (8%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F G+ +GFD+D A+ + + +K ++ + AL+ Sbjct: 30 KEVRFGVEASYAPFESKSPAGELQGFDIDVGNAVCAKL---KAKCVWVENSFDGLIPALE 86 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152 +++ ++ + T R + F Y I K + + + L G + V Sbjct: 87 ARKFSAINSDMTITDQR--RQAIDFTDPIYTIPNQMIAKKGSALQPTPASLKGKHVGVLQ 144 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT E + + + ++ ++I A + R DA D A L + + Sbjct: 145 GTIQETYAKARWSPAGVD--VVPYQTQDQIYADLASGRLDASFQDAEAASKGFLKKPQGA 202 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 +S L + + D + ++ EL I++++ Sbjct: 203 GFEFAGPAVSDDKLLGAGVGYGVRKNDKALKDALNGALK------ELKADGT-IDRLAAK 255 Query: 268 TTNPDV 273 + V Sbjct: 256 YFDVKV 261 >gi|229514447|ref|ZP_04403908.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae TMA 21] gi|229348427|gb|EEO13385.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae TMA 21] Length = 278 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 86/247 (34%), Gaps = 20/247 (8%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 + +++ L IK+RG L+ G++T V +A G+ GF++D + L++ Sbjct: 24 AFTLPAVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW 82 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++++P AL +K+ D++ T R S + F G +K Sbjct: 83 ---QVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAANK 137 Query: 134 K--KGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 K +G S + + I + G T + F + F+ + Sbjct: 138 KLAEGFSKLEDFNKRNVKIAARRGAFTVQVARETFPKA----SVLQFDDDAQAFQEVING 193 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWT 244 A + + + + +SK A A+ G+ + I T Sbjct: 194 NAHAVIASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKKAFFDQWIADRT 252 Query: 245 HYAMVTA 251 + A Sbjct: 253 ADGWLQA 259 >gi|149002608|ref|ZP_01827540.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP14-BS69] gi|147759219|gb|EDK66212.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP14-BS69] Length = 229 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L L +F I K +K +T F ++ +KG D Sbjct: 1 MKKKFLAFLLILFPIFSLG----------IAKAETIKIVSDTAYAPFEFKDSDQTYKGID 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + IQ A+Q+ Q D + T RE Sbjct: 51 VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K IS QL+G ++ V+ GT + L + F+ + Sbjct: 106 TYYDTKVVIATTKSHKISKYDQLTGKTVGVKNGTAAQRFLETIKDKYGF--TIKTFDTGD 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + A DA D + Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193 >gi|25028002|ref|NP_738056.1| putative secreted protein [Corynebacterium efficiens YS-314] gi|23493285|dbj|BAC18256.1| putative secreted protein [Corynebacterium efficiens YS-314] Length = 348 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 36/229 (15%), Positives = 72/229 (31%), Gaps = 13/229 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 +RG L G N F ++G+ G ++D RA++ + D + + Sbjct: 100 ERGVLTAGANPPFPPFEFKDSDGEIIGVEMDLARAMAGVMGLDYQP---QEQDFSLILPS 156 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 +Q+ +D+ + R + F Y Q ++ G +I VQ Sbjct: 157 VQAGTVDMGASGFTDNEER--RMNFDFIDFLYAGVQWAQSSDREEDIDPDNACGLTIAVQ 214 Query: 152 AGTTTELT-----LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 T E + ++ + A R DA D Sbjct: 215 RTTVAETDDVRPKSEQCVAEGKEPITVLAYDTADTAATALILGRADALAADSPITAWAVA 274 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 +D E + DI +P A+ + ++E + + ++ + Sbjct: 275 RSDDRIEL--VGDIFMAAPFGFALPK-ESELTPVAARAFQHLIDTGDYE 320 >gi|315639992|ref|ZP_07895119.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus italicus DSM 15952] gi|315484254|gb|EFU74723.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus italicus DSM 15952] Length = 286 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 38/255 (14%), Positives = 78/255 (30%), Gaps = 17/255 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGLVGFAEV 50 M K F +S+ L L + ++++ I+K L + L + Sbjct: 1 MKKSFVISLSILCSLLIFAGCSSSTSSSDTATTDTNWEKIEKNKTLTVATSGTLYPASYY 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + G+D+D + ++ + ++Y N + A+Q+ D+++ + R Sbjct: 61 NDDNQLVGYDIDVIKEVAKRLDLKVKTVEY---NVDGQLAAVQNGSADLIANDMSINETR 117 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 L+ F GI+S L G TT + +A+ A + Sbjct: 118 AKKYTLSSPIKWSFGSMIVRKSDNSGITSFDDLKGKK-AAGEATTNYMKIAESMGATLVS 176 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 Y E+ R D D ++ + S + Sbjct: 177 YD---NATNEQYLTDVANGRTDVILNDYYLQKMATAALPDVPVKILPDMYFNLSSSGFLM 233 Query: 231 IQGDTEWYNIVSWTH 245 + T ++ T Sbjct: 234 KKTSTTLEKKINQTI 248 >gi|308172212|ref|YP_003918917.1| cystine ABC transporter binding protein [Bacillus amyloliquefaciens DSM 7] gi|307605076|emb|CBI41447.1| cystine ABC transporter (binding protein) [Bacillus amyloliquefaciens DSM 7] Length = 256 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 73/251 (29%), Gaps = 18/251 (7%) Query: 5 FFVSILCLIILF----FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59 VSI L S S + + +KK+G L G F G+ Sbjct: 1 MMVSIAVLAACGNSQDSGSKSKDGDLWASVKKKGVLTVGTEGTYEPFTFHDKKTDKLTGY 60 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DV+ + ++ + + F L +K+ D+++ T F Sbjct: 61 DVEVIQEVAKRLGLKAD---FKETQWDSMFAGLNAKRFDVVANQVGKTG---RENQYDFS 114 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + K I+ + + G + Q+ T+ LA A E + Sbjct: 115 DKYTTSNAVVVTKKDSTIAKEADVKGKT-AAQSLTSNYNKLAKEAGAK-----IEGVEGM 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + + R D D A+ T+ + + + A +G E Sbjct: 169 AQSLQLIQQGRADLTYNDKLAVLNYLKTSGNKNVKIAFEAGQPQQTY-FAFRKGSGELVT 227 Query: 240 IVSWTHYAMVT 250 V+ M Sbjct: 228 HVNKALKEMKE 238 >gi|163841374|ref|YP_001625779.1| ABC transporter amino acid-binding protein [Renibacterium salmoninarum ATCC 33209] gi|162954850|gb|ABY24365.1| ABC transporter amino acid-binding protein [Renibacterium salmoninarum ATCC 33209] Length = 308 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 81/276 (29%), Gaps = 41/276 (14%) Query: 6 FVSILCLIILFFTSFSTNASILGD----------------------------IKKRGFLK 37 ++IL + L + + + L I+ RG L Sbjct: 11 MLAILAVGALALSGCTYESEKLDRPASGATAAPFDLDSVKTNAVLTAQLPESIRNRGTLI 70 Query: 38 CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 G NT + A+G G+D++ A++ + AL + Sbjct: 71 VGSNTEYPPAEFLDASGKPTGYDIEMITAIAKKLGLKTEA---QSAEFTAILPALGP-KY 126 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 D+ + T R + + ++ + G SI VQ GTT E Sbjct: 127 DVGISSFTVTPER--LNNVNMVSFLNVGTTWAVQKGNPKKVDLNNICGLSIGVQTGTTQE 184 Query: 158 L-----TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 A + + + + +I DA D + Sbjct: 185 DPDLSGRSAKCKEDGKAPINIVTLKNQTDITTRLIGGTLDAMAADSPITGYAITQTNGKI 244 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 E L D ++P A A+ + DT + ++ A+ Sbjct: 245 E--RLTDAYDQAPQAIAVAKSDTTFAELIKKALDAL 278 >gi|150377102|ref|YP_001313698.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150031649|gb|ABR63765.1| extracellular solute-binding protein family 3 [Sinorhizobium medicae WSM419] Length = 276 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 40/264 (15%), Positives = 86/264 (32%), Gaps = 21/264 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASIL-GDIKKRGFLKCGINTGLVGFAEVKA-NGDWKG 58 M K I L + + S +A+ L IK G + V + KG Sbjct: 1 MNKH----IAALTVACLAATSASAAGLPERIKTAGKVVAANQPNYPPMEYVDPATNELKG 56 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D+D AL+ + + +++ + ++ +L + ++D++ R L F Sbjct: 57 VDIDLGLALAKELG---TTVEWTNIGFEQMISSLTTGRVDLIHSGMSDLPKR--RETLDF 111 Query: 119 RPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY----- 171 G F +K +++ G ++ + T+ A + A+ Sbjct: 112 VD-YMKSGAQFYTSFGRKDEFKTLTDFCGKTVGMSRRTSFPDETAKWSAANCEAKGLGAI 170 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + E + A + R DA L L + ++ + + Sbjct: 171 KVVGTEGSADARAQLKQGRLDAAVQGSETLPYLMDLEKD--TYAVVGEPFTTVYQGIGFA 228 Query: 232 QGDTEWYNIVSWTHYAMVTAEELG 255 + D E + + A++ + E Sbjct: 229 KKDAELRDAYAAALKALMQSGEYK 252 >gi|321312474|ref|YP_004204761.1| sulfur containing amino acid ABC transporter binding lipoprotein [Bacillus subtilis BSn5] gi|320018748|gb|ADV93734.1| sulfur containing amino acid ABC transporter binding lipoprotein [Bacillus subtilis BSn5] Length = 269 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 68/200 (34%), Gaps = 5/200 (2%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 + V +L + L S + + + G T A + GD G+D+ Sbjct: 3 KRKGLVLLLSVFALLGGGCSQTNNKTDP--QAQTVIVGTGTDFPNIAFLDEKGDLTGYDI 60 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + +A+ + ++ ++ +L +K+ID+++ N RE P Sbjct: 61 EVMKAIDKEL--PQYTFEFKTMDFSNLLTSLGNKKIDVIAHNMAKNKEREKRFLYHKVPY 118 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER-VE 180 Y + I ++ L G ++ V A + T + +Y K H H + Sbjct: 119 NYSPMYITVKEDNHKIHTLKDLHGKTVIVGATSNTADYITNYNKTHGSPIHLRYAGQGSN 178 Query: 181 EIDAAYRAHRCDAYTGDISA 200 + R DA A Sbjct: 179 DTANQIETGRADATIATPFA 198 >gi|238020539|ref|ZP_04600965.1| hypothetical protein GCWU000324_00425 [Kingella oralis ATCC 51147] gi|237867519|gb|EEP68525.1| hypothetical protein GCWU000324_00425 [Kingella oralis ATCC 51147] Length = 281 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 65/198 (32%), Gaps = 11/198 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 + + S++ I +G + G F+ +G G+DV+ RA++ + Sbjct: 36 AAPAANPQGSLIERINNKGTITVGTEGTYAPFSYHDKDGKLTGYDVEVTRAVADKLG--- 92 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 K+++ L++ + D+++ T E + G ++ K Sbjct: 93 IKVEFKETQWDSMMAGLKAGRFDVVANQVGLT-SPERQATFDKSEPYSWSGAVLVVRKDD 151 Query: 136 G-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 I S + + G V+ + + K + + + + R DA Sbjct: 152 DKIKSPADIKG----VKTAQSLTSNFGEKAKEAG--AELVPVDGLAQSLTLIEQKRADAT 205 Query: 195 TGDISALYALKLTNDRPS 212 D A+ N + Sbjct: 206 LNDELAVLDYLKKNSNAN 223 >gi|218662937|ref|ZP_03518867.1| putative substrate-binding component of ABC transporter [Rhizobium etli IE4771] Length = 171 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 4/145 (2%) Query: 1 MYKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M F ++ L+ + S S L ++ RG L G + + + +G Sbjct: 1 MTISFRTGVISLVAVALLSTPVLAEGSKLDEVLARGHLVLGTGSTNAPWHFKSEDDKLQG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDVD R ++ A+F DP KI+Y+ ++ R + + ++DI + T R + +AF Sbjct: 61 FDVDMGRIIAKALFGDPEKIEYVNQSSDARIPNITTDKVDITCQFMTVTGER--AQQVAF 118 Query: 119 RPITYFDGQGFIMHKKKGISSVSQL 143 Y +G G ++ + + L Sbjct: 119 TIPYYREGVGLMLKADGKYADYAAL 143 >gi|213650566|ref|ZP_03380619.1| arginine-binding periplasmic protein 2 [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 177 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 65/190 (34%), Gaps = 18/190 (9%) Query: 10 LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69 + L L + S +A L G + + V A+ GFD+D A+ Sbjct: 1 MLLASLSVHAASVSART---------LHFGTSATYAPYEFVDADNKIVGFDIDVANAVCK 51 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + ++ + + L+ K+ D + D T RE ++F Y Sbjct: 52 EM---QAECSFTNQSFDSLIPGLRFKKFDAVIAGMDMTPKRE--QQVSFSQPYYEGLSAV 106 Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 ++ +K + + L G + ++ GTT + L D P+ ++ + + Sbjct: 107 VVTRKGAYHTFADLKGKKVGLENGTTHQRYLQD----KQQAITPVAYDSYLNAFTDLKNN 162 Query: 190 RCDAYTGDIS 199 R A Sbjct: 163 RLRACLAMSP 172 >gi|303256624|ref|ZP_07342638.1| cyclohexadienyl dehydratase [Burkholderiales bacterium 1_1_47] gi|302860115|gb|EFL83192.1| cyclohexadienyl dehydratase [Burkholderiales bacterium 1_1_47] Length = 288 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 80/249 (32%), Gaps = 13/249 (5%) Query: 1 MYK-DFFVSILCLIILFFTSF---STNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGD 55 M SIL L + T+ A L IK G L G + + G Sbjct: 27 MKHGKLVTSILVLSLAAVTAAFASMAEARSLEQIKASGELLVGSTGDYKPMSYLNKETGK 86 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 ++GFD + +L+ + ++Y+P K + + D+ T R+ + Sbjct: 87 YEGFDAEMAESLAKYLGVK---LKYVPTTWKTLQADTMADKFDVAMSGITVTDARKKVMT 143 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 ++ +T+ +K ++ ++ ++ V + K K ++ Sbjct: 144 MSDGYLTFGKTILVTKNKAGQFKELNDVNQPTVRVMYNPGGTN--EKFAKEMTPKAQLMM 201 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGD 234 E EI + D + + A + D P L D + QG Sbjct: 202 HEHNAEIPGLVGEGKADVMITET--MEARRYAKDNPKIAAPLVDKPFTENHFGVLMKQGY 259 Query: 235 TEWYNIVSW 243 + V+ Sbjct: 260 PKLEAAVND 268 >gi|306996359|gb|ADN22849.1| collagen-binding protein [Lactobacillus reuteri] Length = 263 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 63/215 (29%), Gaps = 18/215 (8%) Query: 1 MY--KDFFVSILCLIILFFTS----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54 M K ++I L + + ++++ ++ +G L G+ ++ N Sbjct: 1 MKFWKKAPLTIAALTVSTSAGITSVSAASSAVNSELVHKGELTIGLEGTYSPYSYR-KNN 59 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 GF+VD +A++ + ++P L S + D++ N T R Sbjct: 60 KLTGFEVDLGKAVAKKMGLKA---NFVPTKWDSLIAGLGSGKFDVVMNNITQTPER--GK 114 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F I+ I S+ + G I GT + K Sbjct: 115 QYNFSTPYIKSRFALIVPTDSNIKSLKDIKGKKIIAGTGTNNANVV------KKYKGSLT 168 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + R A YA N Sbjct: 169 PNGDFASSLDMIKQGRAAGTVNSREAWYAYSKKNS 203 >gi|77408470|ref|ZP_00785208.1| amino acid ABC transporter, substrate-binding protein [Streptococcus agalactiae COH1] gi|77172912|gb|EAO76043.1| amino acid ABC transporter, substrate-binding protein [Streptococcus agalactiae COH1] Length = 285 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 77/256 (30%), Gaps = 14/256 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNAS----ILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K + ++ L + + S S +IKK G LK L + + Sbjct: 1 MKKTILLGLVGLSAMTLAACSNGQSNKETTWDNIKKDGVLKVATPATLYPTSYYDDHKKL 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G+++D + + K++++ + E F ++ S ++D+ N D T R Sbjct: 61 TGYEIDMMK---AIAKKLKIKVKFVEVGVAESFTSVDSGKVDVAVNNFDTTPER--LKKY 115 Query: 117 AFRPITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + G I+ + LS G + K + Sbjct: 116 NFSQPYKYSVGGMIVRADGSSKITAKDLSDWKGKKAGGGAGTQYMK-IAKQQGAEPVIYD 174 Query: 176 FERVEEIDAAYRAHRCDAYTGDIS--ALYALKLTNDRPSEHVILPDI-ISKSPLAPAIIQ 232 + R D D + +T P V + D+ + + + + Sbjct: 175 NVTNDVYLRDVSTGRTDFIPNDYYTQVIAVKYVTKQYPDIKVKMGDVKYNPTEQGIVMSK 234 Query: 233 GDTEWYNIVSWTHYAM 248 D + M Sbjct: 235 KDKSLKTKIDAAIKDM 250 >gi|126699793|ref|YP_001088690.1| amino-acid ABC transporter substrate-binding protein [Clostridium difficile 630] gi|255101315|ref|ZP_05330292.1| amino-acid ABC transporter,substrate-binding protein [Clostridium difficile QCD-63q42] gi|255307191|ref|ZP_05351362.1| amino-acid ABC transporter,substrate-binding protein [Clostridium difficile ATCC 43255] gi|115251230|emb|CAJ69061.1| ABC-type transport system,cystine/aminoacid-family extracellular solute-binding protein [Clostridium difficile] Length = 267 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 89/263 (33%), Gaps = 12/263 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + L+ + ++ + +++ ++ + FA + KGF+ Sbjct: 1 MKKLKLIIMFALVSALLVTGCSSGNNKNK-EEQKVIRVATSGTYYPFAFKDKD-KLKGFE 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF + ++++ + F L++ + D +S T RE AF Sbjct: 59 VDFWDEFAKRTNCK---VEWVLTDFSGLFGLLEADKADAVSAQLTATPEREK--KYAFSD 113 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G I+ + I S+ L G + V G L + + +K + Sbjct: 114 AYNYSGTNIIVREDDTSIKSIDDLVGKKVGVGTGAVANEILKEKYPNDEIKIVNYSSATL 173 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD--TEW 237 + R DA + AL ++ ++ I + A+ + + +W Sbjct: 174 KGNYQDLEMGRLDAVVAQD--VEALIAIKEQKLNLKMIEPPIQFGACSFALQKNEKGEKW 231 Query: 238 YNIVSWTHYAMVTAEELGITQKN 260 ++ M L +N Sbjct: 232 TKEINEVIEEMYKDGTLTKISEN 254 >gi|329117484|ref|ZP_08246201.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus parauberis NCFD 2020] gi|326907889|gb|EGE54803.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus parauberis NCFD 2020] Length = 275 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 76/248 (30%), Gaps = 10/248 (4%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61 K VS L L + + N KK + F+ +G G+D+ Sbjct: 4 KKIVAVSALGLATVSLLAACANDKNANSDKKE-KVNFATVGTTAPFSYQ-KDGKLTGYDI 61 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + +A+ + K+ + F L + + + + N +T R + F Sbjct: 62 EVAKAVFKD--SEDYKVNFKKTEWSSIFTGLDASKFQMGANNISYTKER--ANKYLFSYP 117 Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE- 180 T ++ K I S + + G S V GTTT L DY K K + + Sbjct: 118 TGTTPSVLVVPKDSNIKSYADIKGHSTQVVQGTTTAAQLEDYKKKEGDKSLNLKYTNENI 177 Query: 181 -EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEWY 238 +I + + D D + +P P Q E Sbjct: 178 TQILSNLSQGKADFKIFDAP-TVNSIIKEQGLDNLKTIPLESKDQPYIYFIFGQDQEELQ 236 Query: 239 NIVSWTHY 246 + V+ Sbjct: 237 SFVNKRLK 244 >gi|218461456|ref|ZP_03501547.1| amino acid ABC transporter substrate-binding protein [Rhizobium etli Kim 5] Length = 231 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 75/225 (33%), Gaps = 18/225 (8%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 V + +++ + A ++ ++ + F + AN +GFD+D Sbjct: 1 MVGGVAVVLAAVSPLPVAA------QEPMPMRVAVEGAFPPFNYLDANNKLQGFDIDIAN 54 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 AL + Q++ + L + + D + + +L R +AF Y Sbjct: 55 ALCE---TGKFECQFIIEKWDDMIPDLIAGKYDAIISSMSMSLER--RQKVAFTEKYYNS 109 Query: 126 GQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 FI K IS S + LSG + V + T E ++ VF E+ Sbjct: 110 PSVFIARKDSPISDVSPAALSGKKLGVTSSTAQESYANHFYP----DMKKTVFRSSPELY 165 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLA 227 R D D A+Y + PD++ + Sbjct: 166 KGLSDGRVDIILEDKLAIYDWIANTKAGTCCAFKGPDLVDVTYFG 210 >gi|85059073|ref|YP_454775.1| arginine ABC transporter periplasmic component [Sodalis glossinidius str. 'morsitans'] gi|84779593|dbj|BAE74370.1| arginine ABC transporter periplasmic component [Sodalis glossinidius str. 'morsitans'] Length = 243 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 36/247 (14%), Positives = 87/247 (35%), Gaps = 25/247 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + ++ ++ F V A+ +GFD Sbjct: 1 MNKTVLATLLAALSTGVSAAE-------------TVRFATEATYAPFEFVGADNKIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D AL + ++ + +L+ ++ D + D T + +AF Sbjct: 48 IDLANALCKQM---QAECTFTNQAFDSLIPSLRFRRFDAVISGMDITP--DRLKQVAFTQ 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + F+ K + ++ L+G + +Q G+T + L D +++ + ++ + Sbjct: 103 PYYENSAIFVAQKG-KFTDMASLAGKRVGMQNGSTHQKYLMD----KHLEITAVPYDSYQ 157 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH--VILPDIISKSPLAPAIIQGDTEWY 238 + R D+ GD + + + + + + + L A+ Q +T Sbjct: 158 NAILDLKNGRLDSVFGDTAVVNEWLMKDAGLATVGDKVTDKAYFGTGLGIAVRQNNTALL 217 Query: 239 NIVSWTH 245 + + Sbjct: 218 DKFNQAL 224 >gi|47094853|ref|ZP_00232467.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes str. 1/2a F6854] gi|254898981|ref|ZP_05258905.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes J0161] gi|254911531|ref|ZP_05261543.1| glutamine ABC transporter [Listeria monocytogenes J2818] gi|254935857|ref|ZP_05267554.1| glutamine ABC transporter [Listeria monocytogenes F6900] gi|47016735|gb|EAL07654.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes str. 1/2a F6854] gi|258608445|gb|EEW21053.1| glutamine ABC transporter [Listeria monocytogenes F6900] gi|293589477|gb|EFF97811.1| glutamine ABC transporter [Listeria monocytogenes J2818] Length = 480 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 53/297 (17%), Positives = 94/297 (31%), Gaps = 22/297 (7%) Query: 1 MYK----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K ++I C+ T NA + G +T F + +G+ Sbjct: 1 MKKFSRFILMMAIACVAAFILTGNGLNAKAAEE-----TYLIGTDTTFAPFEF-EKDGEH 54 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D+D +A++ K + + AL++ Q+D + T R+ Sbjct: 55 VGIDMDILKAIAKD---QNFKYEIKAMGFNAAVQALEANQVDGVIAGMSITDERK--QKF 109 Query: 117 AFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + G I+ I + L G + V+ GT + +V Sbjct: 110 DFSDPYFDSGVVMGILKDNDEIKTYDDLKGKKVAVKTGTEGYAFAEKI--KDKYDFDIVV 167 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ ++ + A D L T + I+ + + A+ +G Sbjct: 168 FDDSAQMYDDVKTRNSVACFDDYPVLAYGVQT---GNGLKIVTEKEKGNSYGFAVNKGKN 224 Query: 236 EWYNIVSWTHYAMVTA-EELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291 + + A E KN + N + F+GI KSS GL Sbjct: 225 QELLEKFNAGLVNIKASGEYEKILKNYLGKNAIKENTTEKGFMGIIKSSWPALLSGL 281 >gi|282863108|ref|ZP_06272168.1| extracellular solute-binding protein family 3 [Streptomyces sp. ACTE] gi|282562090|gb|EFB67632.1| extracellular solute-binding protein family 3 [Streptomyces sp. ACTE] Length = 273 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 84/250 (33%), Gaps = 18/250 (7%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIK------KRGFLKCGINTGLVGFAEVKANGDWKG 58 + ++ T S++ G K ++ L + F + +G G Sbjct: 10 LTACAAVVGLVLTTGCSSSGDGPGQAKGGVDVVEKDKLTTCTHLPYPPFQSEQ-DGKVVG 68 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV ++ + + KI P + L S + D+ + T R+ + F Sbjct: 69 FDVALVDLVAKNLDVE-QKILDTPFENFKTGAFLNSGECDLAAAGMTITDERKK--NVDF 125 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASI--CVQAGTTTELTLADYFKAHNMKYHPIVF 176 + Q + KK G+++++ + + QA TT E A + P+ F Sbjct: 126 SVPYFDATQALLTTKKSGVTALADVKSKKLKLGAQAETTGESY------ATGQGFDPVAF 179 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E + + R + DA D + + +I + ++ +G+TE Sbjct: 180 ESSDAVLNGLRTGQVDAVVIDYPVVQGWLKDKANADAFALGENIETGEQYGFSVKKGNTE 239 Query: 237 WYNIVSWTHY 246 + Sbjct: 240 LKAAIDKAIT 249 >gi|254250960|ref|ZP_04944278.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] gi|124893569|gb|EAY67449.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] Length = 262 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 78/248 (31%), Gaps = 22/248 (8%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++ L +L + +A L+ G+ F NG+ +GFD+D Sbjct: 6 SLKLAFLLACVLGSGAALADAQT---------LRFGLEAQYPPFESKAPNGELQGFDIDV 56 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 A+ ++L + ALQ ++ D ++ + T R + F I Y Sbjct: 57 GNAVCQ---TAKLTCKWLETSFDGLIPALQGRKFDAINSAMNATEQR--RQAIDFTTIIY 111 Query: 124 FDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 I G + + L G + V + E +++ + + ++ + Sbjct: 112 RVPTQLIARTGSGLLPTPESLKGKRVGVLQASIQETYAKAHWEPAGVS--VVAYQDQNQA 169 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGDTEW 237 A A R DA A L+ + + +A + +GD Sbjct: 170 YADLVAGRLDATLVLAPAGQRGFLSRPDGKGFSFVGQPVRDDRILGSGIAFGLRKGDDAL 229 Query: 238 YNIVSWTH 245 + Sbjct: 230 KAKLDAAI 237 >gi|330811616|ref|YP_004356078.1| Putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379724|gb|AEA71074.1| Putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 284 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 82/270 (30%), Gaps = 16/270 (5%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 +L + + S A+ L IK ++ G FA + +G+ G + + + Sbjct: 15 LLLTCAVLGLAGSVQAATLDTIKSNSSIRIGYANET-PFAFTETDGNVTGESPEIAKIIF 73 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + + ++ + L++ + D+++ T R + F Y Sbjct: 74 AKMG--IKQVNGVLTEWGSLIPGLRAGRFDVIAAGMYITPAR--CKQVLFTDPQYQLPDA 129 Query: 129 FIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++ K + S ++ A + LA + + A Sbjct: 130 LLVAKGNPKKLHSYEDIAKQPDVKLAIMAGTVNLAYARDSGVKDDQILQVPDTTAQLQAV 189 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHV--ILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 RA R DA G + L E + D A A D + + V+ Sbjct: 190 RAGRADAAVGTQLTMKGLASKGGDKVEAMTEFKDDPSHIGYGALAFRPEDKDLRDAVNAE 249 Query: 245 HYAMVTAEE-------LGITQKNINQVSKD 267 + +EE G + N+ + Sbjct: 250 LKKWLGSEEHLKTVAPFGFDKSNVTSKTAA 279 >gi|242372075|ref|ZP_04817649.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus epidermidis M23864:W1] gi|242350187|gb|EES41788.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus epidermidis M23864:W1] Length = 263 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 68/216 (31%), Gaps = 15/216 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILG---DIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M + F I + +L + ++S K L+ G F Sbjct: 1 MKRLLFCVIALVFVLAACGNNDSSSNKDGKSSSKDDNTLRVGTEGTYAPFTFHNKKDQLT 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+D+D +A++ A + K+++ + F L + + D+++ RE Sbjct: 61 GYDIDVIKAVAKA---ENLKLKFNETSWDSMFAGLDAGRFDVIANQVGVNKDREKKYK-- 115 Query: 118 FRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F + ++ +K I S + + G + Q T+ LA A Sbjct: 116 FSDPYTYSSAVLVVRDNEKDIKSFNDVKGKKLA-QTFTSNYGQLAKDKGA-----DITKV 169 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 + + + R D D + K Sbjct: 170 DGFNQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAK 205 >gi|209521582|ref|ZP_03270281.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. H160] gi|209497993|gb|EDZ98149.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia sp. H160] Length = 264 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 76/219 (34%), Gaps = 13/219 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 ++ G+ F G+ +GFD+D A+ + + +K ++ + AL+ Sbjct: 30 KEVRFGVEASYAPFESKSPAGELQGFDIDVGNAVCAKL---KAKCVWVENSFDGLIPALE 86 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASICVQA 152 +++ ++ + T R + F Y I K G+ + + L G + V Sbjct: 87 ARKFSAINSDMTITDQR--RQAIDFTDPIYTIPNQMIAKKGSGLQPTPASLKGKHVGVLQ 144 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT E + + + ++ ++I A + R DA D A L + + Sbjct: 145 GTIQETYAKARWAPAGVD--VVPYQTQDQIYADLASGRLDASFQDAEAASKGFLKKPQGA 202 Query: 213 EHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHY 246 +S L + + D + ++ Sbjct: 203 GFEFAGPAVSDDKLLGAGVGYGVRKNDKALKDALNGALK 241 >gi|326693347|ref|ZP_08230352.1| amino acid ABC transporter periplasmic protein [Leuconostoc argentinum KCTC 3773] Length = 482 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 78/251 (31%), Gaps = 18/251 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + + L+ +A+ ++ + F NG + G D Sbjct: 4 MKRYLLIVAIALLSFVGFGLDAHAA------EKPNYVITTDATYPPFDFQDKNGQYTGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + + ++ + P++ ++ S Q D + T R+ F Sbjct: 58 QEILKTIAER---EGFTYTLKPMSFNSATQSVASDQADGVIAGMSITDERKKV--FDFGT 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G G+ + K I S+ L G ++ ++ GT+ K + K + F + Sbjct: 113 PYYRSGIGWAVKKGSNIKSLKDLKGKTVAIKTGTSGADYALSIQKKYGFK--VVYFNDSD 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGDTEWY 238 + A GD+ + + + ++ A+ +G Sbjct: 171 TLYNDVINDNSQATFGDLPVI---QYAVKNGTALKVMNPKSPIQAGWYGFAVKKGKNAQL 227 Query: 239 NIVSWTHYAMV 249 + +A + Sbjct: 228 LVDFNKGFAAI 238 >gi|45359195|ref|NP_988752.1| glutamate-binding protein [Methanococcus maripaludis S2] gi|45048070|emb|CAF31188.1| Solute-binding protein/glutamate receptor:Bacterial extracellular solute-binding protein, family 3 [Methanococcus maripaludis S2] Length = 240 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 94/246 (38%), Gaps = 18/246 (7%) Query: 1 MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M F +L + S +N + L D G L G+ + A + NG+ KG+ Sbjct: 1 MKNAVIFSVLLVITSCACISSDSNTTTLKD----GVLTVGVFKYVPP-AVYEENGELKGY 55 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +V+ ++ + K++Y + A+ + ++D + T RE ++F Sbjct: 56 EVELISEIAERM---DLKVEYKEYMFSDLLNAVANNEVDCAISDIAVTPEREKI--VSFS 110 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 ++ K I ++ + G + V AGT + ++ K+ + + + Sbjct: 111 RAYSKTDIILVVPKDSDIEKLTDIIGQKVGVTAGTIDDDKSSELLKS--IDFQVCRYNNH 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E+ A + DA + + +++ ++ L + I+ A+ + + E Sbjct: 169 DELYDALESGNVDAIISEENNFESVQNSSIN-----YLDEPIATVYCGIAVNKDNKELRL 223 Query: 240 IVSWTH 245 ++ Sbjct: 224 KINDII 229 >gi|86147776|ref|ZP_01066083.1| hypothetical amino acid ABC transporter, periplasmic aminoacid-binding protein [Vibrio sp. MED222] gi|85834414|gb|EAQ52565.1| hypothetical amino acid ABC transporter, periplasmic aminoacid-binding protein [Vibrio sp. MED222] Length = 260 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 82/248 (33%), Gaps = 21/248 (8%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + ++ + F ++G GFD++ AL D ++ + + Sbjct: 23 QAKEIRLASDFTYPPFNYKNSDGVPVGFDIEIADALCEQAKLD---CTWVSQSWDSLIPS 79 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICV 150 L +++ D++ + T R+ + F Y F+ K S L+G +I V Sbjct: 80 LLARKSDVIMASMRITEERKR--KILFTDKYYQTPAVFVAAKSAEFSVDEAGLTGKTIGV 137 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q GT + + D F + + +E+ + R D G+ L L Sbjct: 138 QQGTIHDRYVTDKF---GSVANIKRYTGQDEVYLDLQNGRLDLTFGNSDQLSLAFLDKKE 194 Query: 211 PSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A A+ + D++ + EE+ ++++ Sbjct: 195 GEGFEFKGKAVTDKAYIGEGTALALRKQDSKLAKQFNAAI------EEIRANGT-YDKIA 247 Query: 266 KDTTNPDV 273 D+ Sbjct: 248 AKYFTFDI 255 >gi|229522564|ref|ZP_04411980.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae TM 11079-80] gi|229340549|gb|EEO05555.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae TM 11079-80] Length = 278 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 42/243 (17%), Positives = 84/243 (34%), Gaps = 20/243 (8%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 + +++ L IK+RG L+ G++T V +A G+ GF++D + L++ Sbjct: 24 AFTLPAVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW 82 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++++P AL +K+ D++ T R S + F G K Sbjct: 83 ---QVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAASK 137 Query: 134 K--KGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 K +G S + + I + G T + F + F+ + Sbjct: 138 KLAEGFSKLEDFNKRNVKIAARRGAFTVQVARETFPKA----SVLQFDDDAQAFQEVING 193 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 A + + + + +SK A A+ G+ + + Sbjct: 194 NAHAVIASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEED-----KKAFFDQW 247 Query: 250 TAE 252 AE Sbjct: 248 IAE 250 >gi|170700296|ref|ZP_02891309.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gi|170134783|gb|EDT03098.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 317 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 77/232 (33%), Gaps = 11/232 (4%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSK 77 + S L I +R + G+ F + GF+VD ++ + D Sbjct: 62 GVARADSTLDRIHQRHKISIGVILSGPPFGSLDPATQKQVGFNVDLANDVAKRLGVDAE- 120 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 P+ R LQ ++D L N + T R L A P G I GI Sbjct: 121 --LTPVQPSNRVQFLQQGKVDALIANMELTTERAEILSYAPTPF-ESIGGALIARTDSGI 177 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S + L G +CV G+ LA + A F E A R + C A Sbjct: 178 KSWADLRGKPVCVSQGSNYTKPLAAEYGA-----QVKAFRGQPESLLALRGNNCVAAVHV 232 Query: 198 ISALYALKLTNDRPSEH-VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 L L N ++ L + SP + +G+T+ + + Sbjct: 233 APTLRMLVARNPDWKDYTTPLSTDLIPSPAVIWVRKGETDTQSALDRIVQDW 284 >gi|153801946|ref|ZP_01956532.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae MZO-3] gi|124122521|gb|EAY41264.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae MZO-3] Length = 278 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 85/247 (34%), Gaps = 20/247 (8%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 + +++ L IK+RG L+ G++T V +A G+ GF++D + L++ Sbjct: 24 AFTLPAVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW 82 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++++P AL +K+ D++ T R S + F G K Sbjct: 83 ---QVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAASK 137 Query: 134 K--KGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 K +G S + + I + G T + F + F+ + Sbjct: 138 KLAEGFSKLEDFNKRNVKIAARRGAFTVQVARETFPKA----SVLQFDDDAQAFQEVING 193 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWT 244 A + + + + +SK A A+ G+ + I T Sbjct: 194 NAHAVIASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKKAFFDQWIADRT 252 Query: 245 HYAMVTA 251 + A Sbjct: 253 ADGWLQA 259 >gi|152996348|ref|YP_001341183.1| ectoine/hydroxyectoine ABC transporter solute-binding protein [Marinomonas sp. MWYL1] gi|150837272|gb|ABR71248.1| Ectoine/hydroxyEctoine ABC transporter solute-binding protein [Marinomonas sp. MWYL1] Length = 282 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 84/265 (31%), Gaps = 19/265 (7%) Query: 1 MYKDF--FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K ++ L + S S A+ L IK G + G+ V + +G+ G Sbjct: 1 MKKTLGKYLISLMSFTVALFSVSVAATTLDKIKDEGTVTIGV-ANEVPYGYTTPDGEPAG 59 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 + + + D ++ + L++ + D+++ T R + F Sbjct: 60 EAPSIAVKVLNDLGVD--NVKVVVTEFGSLIPGLRAGRFDVIAAGMYITPKR--CKQILF 115 Query: 119 RPITYFDGQGFI----MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 TY G+GF+ K+ + V +G+ DY + Sbjct: 116 SNPTYSIGEGFLVQNGNPKELNGYDSIDSKAVKLGVMSGSVEYGYARDYGIDL---SKVV 172 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLT-----NDRPSEHVILPDIISKSPLAPA 229 AA ++ R DA G + +L +P +I+ K Sbjct: 173 TLPDYPSGVAALKSGRIDALAGTSLTMASLAQKDDRVELAQPFTPLIIKGKSVKGYGGFG 232 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEEL 254 DT + + + + +E Sbjct: 233 FRPADTALRDAFNAELKSFIDTKEH 257 >gi|218132831|ref|ZP_03461635.1| hypothetical protein BACPEC_00692 [Bacteroides pectinophilus ATCC 43243] gi|217991704|gb|EEC57708.1| hypothetical protein BACPEC_00692 [Bacteroides pectinophilus ATCC 43243] Length = 493 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 67/222 (30%), Gaps = 14/222 (6%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 G + + NG++ GFD+D + + + + K P++ + + L S Sbjct: 23 TFTVGFDAEFPPYGYKDDNGEYVGFDLDLAQEVCNRQGWNLVK---QPIDWDSKDMELNS 79 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 I + + + Q ++ + +++ L+G + VQA + Sbjct: 80 GTISCIWNGFTMDG---RVDDYTWSSAYIDNSQVVVVKSDSSVKTLADLAGRVMVVQADS 136 Query: 155 TTELTLADYFKAHNMKY------HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 + K A DA D A Sbjct: 137 SALAAFTGEEAEDKNKELCASFASLQQVSDYNSAFMNLEAGSVDAICMD--IGVASYEIK 194 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 R + +L + +S +G+T+ + V T M+ Sbjct: 195 ARSGKFRMLDEHVSSEQYGIGFKKGNTQLRDEVQETLNEMLA 236 >gi|256848280|ref|ZP_05553723.1| amino acid ABC transporter [Lactobacillus coleohominis 101-4-CHN] gi|256714878|gb|EEU29856.1| amino acid ABC transporter [Lactobacillus coleohominis 101-4-CHN] Length = 277 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 33/255 (12%), Positives = 77/255 (30%), Gaps = 20/255 (7%) Query: 2 YKDFFVSI---LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGD 55 K ++ + L + + + + IK + L G + + Sbjct: 7 KKSVLAALTIMIGLSTVLAGCGAKKDNSVQSIKNKKELVVGTSADFAPYDFQIMKNGKQQ 66 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+DV ++ + K++++ + LQ+K++DI+ +T R Sbjct: 67 IVGYDVLLAYEIAKDMG--IKKVKFVNMAFPSLINELQNKKVDIVMAGMAYTPQRAKV-- 122 Query: 116 LAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 ++F + GQ + K +++ L GA++ Q + E Sbjct: 123 VSFSESYHDGGQVLLVSPKNKDKYANIGALKGATLGAQQSSEQEK-----IGKKLKGVKL 177 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS---EHVILPDIISKSPLAPAI 230 + + R D A + ++ +S A+ Sbjct: 178 VTESSNNTLTQELRNGSIDGLITGEDTAEAYAKEHPDKYAVANNISFKYNKKESATRVAV 237 Query: 231 IQGDTEWYNIVSWTH 245 + D ++ T Sbjct: 238 RKDDKALLKKINATI 252 >gi|167838419|ref|ZP_02465278.1| cyclohexadienyl dehydratase [Burkholderia thailandensis MSMB43] Length = 261 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 76/266 (28%), Gaps = 18/266 (6%) Query: 1 MYKDFFVSILCLIIL---FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 M K C + + AS L D+ RG L+ + + +G ++ Sbjct: 3 MKKTLLALACCAGVAHAQTLPQPAAPASRLDDVLARGALRVCTTGDYKPYTYRREDGAFE 62 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G D+D +L+ ++ ++ F+A + DI TL R+ Sbjct: 63 GIDIDMAASLAKSLGVKTEFVKTTWPTLISDFVA----KCDIAVGGISTTLERQK--RAF 116 Query: 118 FRPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 F DG+ I+ + + V G T E +F Sbjct: 117 FTQPYVTDGKTPIVRCADVERYQTIAQIDQPQTRVIVNPGGTNERFAKQHF----THAKI 172 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 VF I A D D S L+ + V A + +G Sbjct: 173 AVFPDNVTIFKQILAGSADVMVTDASETL-LQQKLNPGLCSVHPDKPFQFGEKAYMVPRG 231 Query: 234 DTEWYNIVSWTHYAMVTAEELGITQK 259 D + V + EL Sbjct: 232 DVVFQQYVDQWLHLARETGELQAISD 257 >gi|88855897|ref|ZP_01130559.1| ABC polar amino acid transporter, periplasmic ligand binding protein [marine actinobacterium PHSC20C1] gi|88814764|gb|EAR24624.1| ABC polar amino acid transporter, periplasmic ligand binding protein [marine actinobacterium PHSC20C1] Length = 275 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 79/246 (32%), Gaps = 17/246 (6%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKR------GFLKCGINTGLVGFAEVKANGDWKGF 59 V+ L L + ++ + + + G C ++ F + GF Sbjct: 19 IVAGLFLSVSACSTSAADEPTKSVAEAAFTTVEPGKFICAMSGEYRPFNFFDESNTLVGF 78 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD C A+++ + + + L S + D + + T R+ + + F Sbjct: 79 DVDICGAIANELGLEAEPVTGAFTT---LVAGLASNRFDAIIGSMTATDERKET--VDFT 133 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G + I+SV+ LS +++ V GTT E + + ++ Sbjct: 134 ENYYETGASLFVRNDATINSVADLSDSTLGVALGTTFETY----ARTLDGVADITTYQAT 189 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + A R D L E + D++ A + Q + E Sbjct: 190 VDALRDLAAGRVDGVI--AQGFIGKFLAKSANLEIKSVGDVLLPDTAAIPVNQDNPELRK 247 Query: 240 IVSWTH 245 + Sbjct: 248 AIDEAL 253 >gi|15601790|ref|NP_233421.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O1 biovar eltor str. N16961] gi|121587147|ref|ZP_01676922.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 2740-80] gi|121726631|ref|ZP_01679867.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae V52] gi|147671730|ref|YP_001215043.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O395] gi|153817632|ref|ZP_01970299.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae NCTC 8457] gi|153821745|ref|ZP_01974412.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae B33] gi|227812603|ref|YP_002812613.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae M66-2] gi|229505828|ref|ZP_04395337.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae BX 330286] gi|229510317|ref|ZP_04399797.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae B33] gi|229517551|ref|ZP_04406996.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae RC9] gi|229605361|ref|YP_002876065.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae MJ-1236] gi|254850198|ref|ZP_05239548.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255746230|ref|ZP_05420177.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholera CIRS 101] gi|262158720|ref|ZP_06029834.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae INDRE 91/1] gi|262168872|ref|ZP_06036566.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae RC27] gi|298499806|ref|ZP_07009612.1| amino acid ABC transporter [Vibrio cholerae MAK 757] gi|9658482|gb|AAF96933.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548586|gb|EAX58638.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 2740-80] gi|121630937|gb|EAX63317.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae V52] gi|126511788|gb|EAZ74382.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae NCTC 8457] gi|126520741|gb|EAZ77964.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae B33] gi|146314113|gb|ABQ18653.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O395] gi|227011745|gb|ACP07956.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae M66-2] gi|227015683|gb|ACP11892.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae O395] gi|229345587|gb|EEO10560.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae RC9] gi|229352762|gb|EEO17702.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae B33] gi|229356179|gb|EEO21097.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae BX 330286] gi|229371847|gb|ACQ62269.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae MJ-1236] gi|254845903|gb|EET24317.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255735984|gb|EET91382.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholera CIRS 101] gi|262022571|gb|EEY41278.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae RC27] gi|262029600|gb|EEY48250.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae INDRE 91/1] gi|297541787|gb|EFH77838.1| amino acid ABC transporter [Vibrio cholerae MAK 757] Length = 278 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 79/243 (32%), Gaps = 12/243 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 + +++ L IK+RG L+ G++T V +A G+ GF++D + L++ Sbjct: 24 AFTLPAVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW 82 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++++P AL +K+ D++ T R S + F G +K Sbjct: 83 ---QVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAANK 137 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 K V+ + K + F+ + A Sbjct: 138 KLAEGFTQLEDFNKRNVKIAARRGAFTVQVARETFPKASVLQFDDDAQAFQEVINGNAHA 197 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWTHYAM 248 + + + + +SK A A+ G+ + I T Sbjct: 198 VIASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKKAFFDQWIADRTADGW 256 Query: 249 VTA 251 + A Sbjct: 257 LQA 259 >gi|319779861|ref|YP_004139337.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317165749|gb|ADV09287.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 265 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 65/213 (30%), Gaps = 10/213 (4%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L G F +G ++GF+VD + I L + F A SK Sbjct: 30 LNVGAYPTNPPFEFKNESGTFEGFEVDIVNEAAKRIG---MTTDIADLGFQALFAATTSK 86 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 +ID+ + T R +F Y G I + + L G + V +G+T Sbjct: 87 RIDVAISSITITAER--LKSQSFTQPYYDSDMGIATKADSPIKAEADLKGKIVGVLSGST 144 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 E + + +A ++ + + A R DA DI + Sbjct: 145 GETWVKAHQEADGFS-DVKGYDTQQNLLLDLSAGRVDAAVSDIPGMEYSFTKMKDLVVKE 203 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + + + ++ AM Sbjct: 204 RIKTG---EQYGLMMTKDHP-LLGKLNDALSAM 232 >gi|166365426|ref|YP_001657699.1| amino-acid ABC-transporter permease protein [Microcystis aeruginosa NIES-843] gi|166087799|dbj|BAG02507.1| amino-acid ABC-transporter permease protein [Microcystis aeruginosa NIES-843] Length = 503 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 68/220 (30%), Gaps = 14/220 (6%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 + F + G GFD+D RA+ I + L ALQ++ Sbjct: 41 RVATEATFPPFEFQQG-GQLTGFDIDLMRAIGEEA---DLNIDFRNLPFDGIIPALQART 96 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTT 155 ++ T R + ++F + G + + I + L G I VQ GTT Sbjct: 97 VEAAISGMTITAER--AQAISFSRPYFRAGLAIAVREDNKTIKNFEDLKGKRIAVQIGTT 154 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 L A F+ R +A D + Sbjct: 155 GALEATKIPGA-----TVSQFDSAALALQELINGRVEAVVNDKPVTL-YAIKQAGLRGVK 208 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 ++ +++++ A+ + + +++ ++ + Sbjct: 209 VVGELLTEEFYGIALPKNSP-YLQLINDALGRVIESGRYD 247 >gi|260222554|emb|CBA32231.1| hypothetical protein Csp_D31100 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 265 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 79/253 (31%), Gaps = 10/253 (3%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 K F L L S + L DI K LK + T + V + G D+D Sbjct: 7 KRTFALALATGALLAASGVQAQTALDDILKAKVLKVAVQTDSAPYGFVGTDLKPIGLDID 66 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 + + + + + R ALQ+K+ D++ RE + F Sbjct: 67 MANLIGKKLGVPVEL---VVVVSASRIPALQTKKADLVIATLGKNPDREKV--IDFSSAY 121 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 Q K + S + L+G S+ V G + L FE Sbjct: 122 SPFFQAVFGPKNIPVKSFADLAGKSVGVTRGAMEDQELGKVAP---TGVDTKRFEDNNAT 178 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242 AA+ A + S A + P ++ SP I +G+ + V+ Sbjct: 179 IAAFTAGQVQFVALGAS--VAGNMMTKNPQLSAEYKLLLKDSPNFIGIAKGEDKLKAKVN 236 Query: 243 WTHYAMVTAEELG 255 + EL Sbjct: 237 EIIADAKKSGELE 249 >gi|254461612|ref|ZP_05075028.1| cyclohexadienyl dehydratase [Rhodobacterales bacterium HTCC2083] gi|206678201|gb|EDZ42688.1| cyclohexadienyl dehydratase [Rhodobacteraceae bacterium HTCC2083] Length = 258 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 83/245 (33%), Gaps = 13/245 (5%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFD 60 +K V C+ L S S L +I G LK G + + GFD Sbjct: 4 FKKLGVVAACMTALMGAPVSAQ-SALNEILSGGVLKVGTTGDWNPMSVRDPATNSYVGFD 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D L + + + ++++P + K + + + + + + R + G + Sbjct: 63 IDVMTQLGADLGVE---VEFVPTDWKTLVNGVVAGNYHM-TGSASISPARLKAAGYSNSY 118 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAG--TTTELTLADYFKAHNMKYHPIVFER 178 I+ K ++ ++ A + V TT E + D+F +V E Sbjct: 119 ISVEMLPFTTEDKADRFTTWDSINNADVTVSTTLGTTFEKLVRDWFP----NAKIVVVEA 174 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D + L + + + + +P+A + Q D W Sbjct: 175 PARGFQEVLSGRADVFITSNIEGSTLLTKFPNLRQ-IGVEAPRAPTPIAMLLPQTDQVWI 233 Query: 239 NIVSW 243 N V+ Sbjct: 234 NYVNS 238 >gi|254284660|ref|ZP_04959627.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae AM-19226] gi|262191875|ref|ZP_06050044.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae CT 5369-93] gi|150425445|gb|EDN17221.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae AM-19226] gi|262032240|gb|EEY50809.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae CT 5369-93] Length = 278 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 79/243 (32%), Gaps = 12/243 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 + +++ L IK+RG L+ G++T V +A G+ GF++D + L++ Sbjct: 24 AFTLPAVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW 82 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++++P AL +K+ D++ T R S + F G +K Sbjct: 83 ---QVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAANK 137 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 K V+ + K + F+ + A Sbjct: 138 KLAEGFAKLEDFNKRNVKIAARRGAFTVQVARETFPKASVLQFDDDAQAFQEVINGNAHA 197 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWTHYAM 248 + + + + +SK A A+ G+ + I T Sbjct: 198 VIASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKKAFFDQWIADRTADGW 256 Query: 249 VTA 251 + A Sbjct: 257 LQA 259 >gi|145223751|ref|YP_001134429.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium gilvum PYR-GCK] gi|315444078|ref|YP_004076957.1| amino acid ABC transporter membrane protein, PAAT family ;amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] gi|145216237|gb|ABP45641.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium gilvum PYR-GCK] gi|315262381|gb|ADT99122.1| amino acid ABC transporter membrane protein, PAAT family ;amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] Length = 493 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 83/289 (28%), Gaps = 36/289 (12%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 + + ++ + +T F A+G++ G D+D Sbjct: 29 LLIGLFGAVLALPGTAGAEGETY---------TVATDTTFAPFEFQDASGEFVGIDMDLI 79 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 RA++ + PL A+Q+ Q+D + T R+ F + Sbjct: 80 RAIAED---QGFTVDIKPLGFDAALQAVQANQVDGVIAGMSITEERKKV--FDFSEPYFE 134 Query: 125 DGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 G ++ + I+S L G + V+ GT + + F + Sbjct: 135 SGIQMAVLEDNEDITSYEDLRGQRVSVKNGTQGSDFANSI--KDQYGFEVVSFADSSTMF 192 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 + A D L + + + + A+ +G Sbjct: 193 DEVKTGNSVAVFEDYPV---LLYGIAQGNGFKTVTPKEDPTGYGFAVNKGQ--------- 240 Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDV-QRFLGIDKSSNIGEALGL 291 AE L + + ++ Q +LG + + + GL Sbjct: 241 ------NAELLQKFNDGLENLKAQGRYDEILQTYLGEEAAESDDSLFGL 283 >gi|152979464|ref|YP_001345093.1| extracellular solute-binding protein [Actinobacillus succinogenes 130Z] gi|150841187|gb|ABR75158.1| extracellular solute-binding protein family 3 [Actinobacillus succinogenes 130Z] Length = 239 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 63/209 (30%), Gaps = 28/209 (13%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +++ + L ++ + F G+ GFD Sbjct: 1 MKK----TLVAALFLSAAFGVQAQD----------IRFAMEPSYPPFEMTNEKGEIIGFD 46 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A+ I + + L+ K+ D T R+ + F Sbjct: 47 VDIANAICKEI---QANCSFQSQPFDSLIQGLKQKRFDAAISGMGITEARKK--QVLFSE 101 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + FI K +++ +I VQ GTT + ++ Y + + Sbjct: 102 PYFSSSAAFIAKKGTDFANLK-----NIGVQNGTTYQNYIS----KEKPGYQVKSYASYQ 152 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND 209 E + R DA GDI L + Sbjct: 153 EAILDIQNGRIDAIFGDIPVLVDMIDKTP 181 >gi|315586884|gb|ADU41265.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Helicobacter pylori 35A] Length = 258 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 32/250 (12%), Positives = 75/250 (30%), Gaps = 13/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F + L++ FF F +S+ + + + G F G G+D Sbjct: 1 MKKVLF--LFLLVVSFFGGFLNASSLYERLVNKETISVGTEGIYPPFTYHNKEGKLTGYD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R L+ + I++ + L+S + D+++ T ++ Sbjct: 59 VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQATFDKSL 114 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G ++ K I + + G +T A + + + Sbjct: 115 PYSYSGTIMLVRKDENRIKDIKDIKGLRTANTLSSTYGEI------AFKYDAQIVSVDSM 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R D A+ T+ + + I + + Sbjct: 169 VQALLLVAQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALE 228 Query: 240 IVSWTHYAMV 249 +++ ++ Sbjct: 229 LINQAMQRLI 238 >gi|293391093|ref|ZP_06635427.1| L-cystine-binding protein TcyA [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951627|gb|EFE01746.1| L-cystine-binding protein TcyA [Aggregatibacter actinomycetemcomitans D7S-1] Length = 259 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 80/262 (30%), Gaps = 21/262 (8%) Query: 1 MYKDFFV--SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K +L + L + + I ++K L G F +G G Sbjct: 1 MKKSILAKTLLLTGLALGIATQAAAGEISDRVEKTKTLLVGTEGTYAPFTFHDDSGKLTG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FDV+ +++ + KIQ+ + L +K+ D+++ T E + Sbjct: 61 FDVEVIESVAQRLG---LKIQFNETQWDSMYAGLNAKRFDLIANQTS--PSPERLKKYLY 115 Query: 119 RPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + + + I + L G Q+ T+ +A A IV + Sbjct: 116 TTPYNYSTAVIVTKEGDDSIKAFEDLKGKK-AAQSLTSNYGKIAKANGA-----ELIVVD 169 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 + + R D A+ + + K P A+++G+ Sbjct: 170 GLAQALKLITQDRAQTVVNDQLAVLDYFKKQPNAGLKIAVK-HDEKVPSGFAVLKGEEPL 228 Query: 238 YNIVSWTHYAMVTAEELGITQK 259 ++ EEL Sbjct: 229 AEKINQAL------EELRKDGT 244 >gi|121607779|ref|YP_995586.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121552419|gb|ABM56568.1| extracellular solute-binding protein, family 3 [Verminephrobacter eiseniae EF01-2] Length = 358 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 76/198 (38%), Gaps = 3/198 (1%) Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G+ V+ C + I +K++Y+ + A+ +++ +DI T R +A Sbjct: 121 GYHVELCERVLRQI-APAAKLEYMAVTAQNTLPLVRNGTLDIGCGPTTNNQAR--QQQVA 177 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 F TY + GI+SV QL G ++ GTT L + ++ + Sbjct: 178 FAVTTYVSEVRMAVRADSGIASVDQLGGRTVAASTGTTAVQMLRKLERTLGAPITVLLGK 237 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 E + R DA+ D + L + + P I+ + P+A + + D + Sbjct: 238 DHAESFLLLESGRVDAFVLDDNLLAGMIASAKNPGHFRIVGQALGSEPIALLMRKDDPAF 297 Query: 238 YNIVSWTHYAMVTAEELG 255 V ++ + EL Sbjct: 298 KAAVDGVLIRLMQSGELE 315 Score = 45.1 bits (105), Expect = 0.018, Method: Composition-based stats. Identities = 5/58 (8%), Positives = 18/58 (31%), Gaps = 4/58 (6%) Query: 2 YKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 + ++ + ++ +++ + L I+ G G+ A + Sbjct: 6 RRTVIIATVAALVCTAGAWAQPSGAAQTTLEKIEASGKAVLGVRESSPPMAYALGANE 63 >gi|115359511|ref|YP_776649.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia ambifaria AMMD] gi|115284799|gb|ABI90315.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 260 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 77/224 (34%), Gaps = 13/224 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K ++ G++ F A+G GFDVD + + +K ++ + Sbjct: 23 KDWTTVRFGVDASYPPFESKDASGKVVGFDVDLGNEICRRM---NAKCVWIENDFDGMIP 79 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149 AL++++ D + + T R+ + F + + K G+ + L G SI Sbjct: 80 ALKARKFDGVLSSMSMTPARQEQIA--FSEKLFNTPTRLVAKKGAGLMPTAESLKGKSIG 137 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ GT E Y+ A + ++ +++ A A R D D L Sbjct: 138 VEQGTIQETYAKTYWAAKG--VKVVPYQNQDQVYADLIAGRLDGALQDAVQAEIGFLKTP 195 Query: 210 RPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248 R + I + + + DT+ + M Sbjct: 196 RGANFDFAGKDIDDPKTLGNGAGIGLRKEDTDLKAKIDSAITGM 239 >gi|329939724|ref|ZP_08289025.1| secreted protein [Streptomyces griseoaurantiacus M045] gi|329301294|gb|EGG45189.1| secreted protein [Streptomyces griseoaurantiacus M045] Length = 321 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 79/243 (32%), Gaps = 21/243 (8%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 DI+K G +K G + + G G D D AL + ++ + Sbjct: 62 DIRKAGVIKVGSDIAYPPVEFM-KGGKATGIDPDIAEALGKQLGVK---FEFQNGKFDQL 117 Query: 89 FLALQSKQIDILSRNTDWTLLR----------EISLGLAFRPITYFDGQGFIMHKKKG-- 136 + LQ+ + ++ + T R + G+ F + G ++ K Sbjct: 118 VVGLQAGRTQVIMSAMNDTKDRQNGIDSDSGKKAGDGVDFVD-YFTAGTSILVQKGNPKG 176 Query: 137 ISSVSQLSGASICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 I S+ L G + +Q GTT+E K + F+ E + Sbjct: 177 IKSLDDLCGKVVALQRGTTSEGVAKAQSKKCTKDGGKAIKLLTFDTDPEALLRLKQGASV 236 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252 A D T+ + ++ + I P + + +T+ + + A++ Sbjct: 237 ADLNDFPVAAYNAKTSGGGKDFEVIGEQIEAGPYGIGVGKKNTQLRDALQAAMNAIIENG 296 Query: 253 ELG 255 + Sbjct: 297 DYK 299 >gi|302542600|ref|ZP_07294942.1| secreted protein [Streptomyces hygroscopicus ATCC 53653] gi|302460218|gb|EFL23311.1| secreted protein [Streptomyces himastatinicus ATCC 53653] Length = 320 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 72/244 (29%), Gaps = 21/244 (8%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I+ G +K G + NG G D D AL + ++ Sbjct: 60 QKIQDAGVIKVGSDINYPPVEFK-KNGKVMGLDPDLANALGKELG---VTFEFNNATFDT 115 Query: 88 RFLALQSKQIDILSRNTDWTLLR----------EISLGLAFRPITYFDGQGFIMHK--KK 135 L+S++ DI R + G+ F + G K + Sbjct: 116 LLSGLRSQRYDIAMSAMTDNKGRQDGVDPDTGKKAGEGVDFVD-YFTAGVSIYTKKGADQ 174 Query: 136 GISSVSQLSGASICVQAGTTTELTL----ADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 I + L G I VQ GT + K+ K F E R Sbjct: 175 SIKTWDDLCGKKIVVQRGTVSHDLAKAESKKCEKSGKRKIAVEAFGNDTEAQTRLRGGGA 234 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 A + D T+ + ++ + + +P A+ + +TE + + ++ Sbjct: 235 AAGSSDFPVAAYAVKTSGGGKDFQLVGEQVDAAPYGIAVSKDNTELRDALQQALALIIAN 294 Query: 252 EELG 255 E Sbjct: 295 GEYD 298 >gi|253584220|ref|ZP_04861418.1| amino acid-binding protein [Fusobacterium varium ATCC 27725] gi|251834792|gb|EES63355.1| amino acid-binding protein [Fusobacterium varium ATCC 27725] Length = 241 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 82/251 (32%), Gaps = 24/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F ++ ++L + + + G N F + NG+ KGFD Sbjct: 1 MKKLFKSLVMGAMVLSLSVTAFAKE---------KIYVGTNAEFPPFEYL-ENGEIKGFD 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ + + D I+ + + ALQ K++D++ R ++F Sbjct: 51 MELVNEIGKILDAD---IKIVDMAFDGLLPALQMKKVDLVIAGMTANEER--MKTVSFTQ 105 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y Q I+ + I S + L G + V G T ++ +++ F Sbjct: 106 PYYTASQVIIVKEGNDSIKSFNDLKGKKVGVMLGFTGDMVVSEI-----EGVKIERFNAA 160 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 A +A + +A D N V+ + A A+ + D Sbjct: 161 YAGIMALQAGKVEAVVLDSEPAKNYVAQNKG---LVLADADAEQEEYAIAVRKNDKALLE 217 Query: 240 IVSWTHYAMVT 250 V + Sbjct: 218 KVEKALKEIKE 228 >gi|116249395|ref|YP_765236.1| putative substrate-binding periplasmic protein [Rhizobium leguminosarum bv. viciae 3841] gi|115254045|emb|CAK12442.1| putative substrate-binding periplasmic protein [Rhizobium leguminosarum bv. viciae 3841] Length = 275 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 34/246 (13%), Positives = 78/246 (31%), Gaps = 9/246 (3%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 ++ ++ + ++ + G + G + A+G + GFD++ Sbjct: 14 LRAGLVTCLLAMGAGSAAAVDNPYNLIEPGTISVGTMGDSKPYTFATADGQFTGFDIELF 73 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 + S + K+ + ++ +++ D+ T R+ + + F Sbjct: 74 LNVVSRLGFQKDKVTFTGQEFSALLPSVANERFDVAVAAIGTTEARKKT--IDFSDGYLA 131 Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 + GI L G + V GT E+ A F + F A Sbjct: 132 GYLSVLTP-DAGIKDADGLKGKRLGVVQGTLQEVYAAKNFG----GTDLVKFPDNNSAVA 186 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 A DA+ D A + P+ V + +P + +G+ + ++ Sbjct: 187 ALNNGTVDAHFLDYE--AAKQYGERYPALKVAVNIPSFDAPAGFVVRKGNDAFRTALNGA 244 Query: 245 HYAMVT 250 + + Sbjct: 245 LHDAMQ 250 >gi|330809596|ref|YP_004354058.1| Putative cyclohexadienyl dehydratase precursor [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377704|gb|AEA69054.1| Putative cyclohexadienyl dehydratase precursor [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 263 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 80/250 (32%), Gaps = 13/250 (5%) Query: 1 MYKDFFVSILC-LIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M LC L+ L + + A S+L + +RG LK + G+++G Sbjct: 1 MKNITSSMTLCGLLALSGGALAEPAPSLLDQVLQRGELKVCTTGDYKPYTFKTEAGEYEG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D+D R+L++++ +Q++ K + + Q DI TL R+ + Sbjct: 61 IDIDMARSLAASLGVK---VQWVQTTWKTLMPDMVAGQCDIGMGGISVTLERQKKAYFSD 117 Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT--TTELTLADYFKAHNMKYHPIVF 176 K+ ++ Q++ S+ + T E + + + F Sbjct: 118 TLDVDGKIPLVRCEDKERYQTLEQMNQPSVRLVEPAGGTNEAFVRAFLPNGQ-----LSF 172 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 I + D D S + V + A + + D Sbjct: 173 HDNVTIFQQLLDKKADVMITDASE-ALYQQKLKPGLCAVNPTRYLQYGEKAYLLPRDDAT 231 Query: 237 WYNIVSWTHY 246 W V + Sbjct: 232 WKMYVDQWLH 241 >gi|289434115|ref|YP_003463987.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170359|emb|CBH26899.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313634164|gb|EFS00821.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria seeligeri FSL N1-067] gi|313638787|gb|EFS03871.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria seeligeri FSL S4-171] Length = 480 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 86/281 (30%), Gaps = 14/281 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F IL L I F + L G +T F + NG+ G D Sbjct: 1 MKK-FSRFILTLAIACVAIFIFTGNGLDAKAAEKTYLIGTDTTFAPFEY-EENGEQVGID 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ K + + AL+S Q+D + T R+ F Sbjct: 59 MDILKAIAKD---QNFKYEIKAMGFNAAVQALESNQVDGVIAGMSITDERK--QKFDFSD 113 Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I S L G + V+ GT + +VF+ Sbjct: 114 PYYESGVVMGVLKDNDEIKSYDDLKGKKVAVKTGTEGYAFAEKVKDKYGFD--IVVFDDS 171 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ + A D L + + I+ + A+ +G+ + Sbjct: 172 AQMYDDVKTRNSVACFDDYPVLA---YGVQKGNGLKIVTKQEKGNSYGFAVNKGENQELL 228 Query: 240 IVSWTHYAMVTA-EELGITQKNINQVSKDTTNPDVQRFLGI 279 + A E + N + F+GI Sbjct: 229 EKFNAGLTNIHASGEYDDIVEKYLGKDAIKANETEKGFMGI 269 >gi|158320976|ref|YP_001513483.1| diguanylate cyclase/phosphodiesterase [Alkaliphilus oremlandii OhILAs] gi|158141175|gb|ABW19487.1| diguanylate cyclase/phosphodiesterase [Alkaliphilus oremlandii OhILAs] Length = 737 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 109/317 (34%), Gaps = 64/317 (20%) Query: 12 LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 + ++ ++++S A R + + + + G++KGF+VD ALS + Sbjct: 3 VSVIGYSTYSKGAPQRDYGASREVISVAGDENHPPYEYMDRIGNYKGFNVDIINALSIEL 62 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 D I+++P+N +E AL++K++D++ + T R+ P F++ Sbjct: 63 GMD---IEFIPMNWREALRALENKEVDVI-QGMSSTEERKEKYLFT-IPTVTNSQSIFVL 117 Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191 + + LSG + QAG E LAD + + E + Sbjct: 118 KDTSIVFGLEDLSGMKVAFQAGDLNEEILADI-----PDITLLPKKDQNEAMDSLINGEA 172 Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 DAY G+ + S I+ + ++ S PA +G+ E ++ + A Sbjct: 173 DAYVGNRLTGLFYLQKSKNSSTVKIVGEQMATSEYGPATYRGNEELVHLFNKGIEA---- 228 Query: 252 EELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFD 311 I+ G Y ++++ Sbjct: 229 ------------------------------------------------IKSNGTYDKIYE 240 Query: 312 RNLGNQSELKIPRGYNA 328 + G + R NA Sbjct: 241 KWFGKD--IGNGRILNA 255 >gi|91790052|ref|YP_551004.1| cyclohexadienyl dehydratase [Polaromonas sp. JS666] gi|91699277|gb|ABE46106.1| cyclohexadienyl dehydratase [Polaromonas sp. JS666] Length = 273 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 87/254 (34%), Gaps = 14/254 (5%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 FV + + AS L ++K G L+ F+ K +G ++G DVD Sbjct: 22 FVMLSGASAQTAAASVPPASSLDAVQKAGVLRICTPGDYKPFSFQKPDGAFEGIDVDLMA 81 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 +L++++ P ++ + + + + D+ T R+ F + Sbjct: 82 SLTASLGVKPE---WVKTSWSNLMPDMVAGKCDLAVGGISVTTERQK--KAFFSTAYMVN 136 Query: 126 GQGFIMHKKK--GISSVSQLSGASICVQ--AGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G+ I +V+ + + V G + E FK M+ +P +E Sbjct: 137 GKTPIARCADVAKYQTVADIDKPATRVIFNPGGSNERFARANFKQAQMRLNPENLTIFDE 196 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 I A+R D + + SA + + + +A + +GD + V Sbjct: 197 IL----ANRADVFVTE-SAEAITQQRLKPGLCAINPDKPLQYGEMAYLLPRGDVTFKAYV 251 Query: 242 SWTHYAMVTAEELG 255 + + E Sbjct: 252 DQWLHLAKASGEYQ 265 >gi|161523018|ref|YP_001585947.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189348154|ref|YP_001941350.1| periplasmic substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221212045|ref|ZP_03585023.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD1] gi|160346571|gb|ABX19655.1| extracellular solute-binding protein family 3 [Burkholderia multivorans ATCC 17616] gi|189338292|dbj|BAG47360.1| periplasmic substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221168130|gb|EEE00599.1| histidine ABC transporter, periplasmic histidine-binding protein [Burkholderia multivorans CGD1] Length = 262 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 79/221 (35%), Gaps = 13/221 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ ++ G++ F +G +GFD+D AL + + +K ++ + Sbjct: 25 KEWTTIRIGVDPTYPPFESTATDGSVQGFDIDLGNALCAKL---NAKCVWVSSSFDGLIP 81 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASIC 149 LQ+++ D++ + T R + F Y + I G + ++L+G I Sbjct: 82 GLQARKFDVILSSMAATEQR--RQQIDFTDRLYRNQTRLIARTGSGLLPEAAKLAGKRIA 139 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ GT E + + A + + ++ A R D D L Sbjct: 140 VEQGTIQETYAREKWAAAK--VEVVPYPSYDQAYADLVNGRVDGVLMDAVQGQLGFLATP 197 Query: 210 RPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245 R ++ + A + + DT+ + ++ Sbjct: 198 RGKGFSFAGGVVYDPKIMGNGDAAGVRKADTDLRDALNRAI 238 >gi|163856554|ref|YP_001630852.1| glutamine ABC transporter periplasmic protein [Bordetella petrii DSM 12804] gi|163260282|emb|CAP42584.1| glutamine-binding periplasmic protein precursor [Bordetella petrii] Length = 248 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 83/246 (33%), Gaps = 20/246 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + L + A + L +T V F + + + GFD Sbjct: 1 MIKRRIAAALVGLSLIGAVSTAAA-------QDKELIVATDTAFVPFEFKQGS-TYTGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + K + P++ LQ+K ID+ + + F Sbjct: 53 IDLWAAIAKEL---NLKYKLQPMDFNGIIPGLQTKNIDVALAGITI--RDDRKQVIDFSD 107 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ I S L+G S+ V+ GT T D+ K + +F + Sbjct: 108 PYYESGLAILVAANEDAIKSAKDLAGKSVAVKTGTATV----DFMKKEVPEAKLRLFPNI 163 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + T + ++ + S A +G ++ Sbjct: 164 DNAYLELATGRVDAAVHDTPNVQYYANTAGKGRV-KVVGTVKSGDFYGIAFPKG-SDLVA 221 Query: 240 IVSWTH 245 V+ Sbjct: 222 KVNQAL 227 >gi|308183091|ref|YP_003927218.1| ABC-type polar amino acid transport,periplasmic component [Helicobacter pylori PeCan4] gi|308065276|gb|ADO07168.1| ABC-type polar amino acid transport,periplasmic component [Helicobacter pylori PeCan4] Length = 258 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 31/250 (12%), Positives = 74/250 (29%), Gaps = 13/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ +L + FF F +S+ + + + G F G G+D Sbjct: 1 MKKVLFLFLLVIS--FFEGFLNASSLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R L+ + I++ + L+S + D+++ T ++ Sbjct: 59 VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQATFDKSL 114 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + ++ K I + + G +T A + + + Sbjct: 115 PYSYSETIMLVRKDENRIKDIKDIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSM 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R D A+ T+ + + I + + Sbjct: 169 AQALLLVAQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALE 228 Query: 240 IVSWTHYAMV 249 +++ ++ Sbjct: 229 LINQAMQRLI 238 >gi|84388560|ref|ZP_00991107.1| hypothetical amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio splendidus 12B01] gi|84377109|gb|EAP93980.1| hypothetical amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio splendidus 12B01] Length = 260 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 82/248 (33%), Gaps = 21/248 (8%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + ++ + F ++G GFD++ AL D ++ + + Sbjct: 23 QAKEIRLASDFTYPPFNYKNSDGVPVGFDIEIADALCEQAKLD---CTWVSQSWDSLIPS 79 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICV 150 L +++ D++ + T R+ + F Y F+ K S L+G +I V Sbjct: 80 LLARKSDVIMASMRITEERKR--KILFTDKYYQTPAVFVAAKSAEFSVDEAGLAGKTIGV 137 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q GT + + D F + + +E+ + R D G+ L L Sbjct: 138 QQGTIHDRYVTDKF---GDVANIKRYTGQDEVYLDLQNGRLDLTFGNSDQLSLAFLDKKE 194 Query: 211 PSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A A+ + D++ + EE+ ++++ Sbjct: 195 GEGFEFKGKAVTDKAYIGEGTALALRKQDSKLAKQFNAAI------EEIRANGT-YDKIA 247 Query: 266 KDTTNPDV 273 D+ Sbjct: 248 AKYFTFDI 255 >gi|238753467|ref|ZP_04614830.1| Arginine-binding periplasmic protein 1 [Yersinia ruckeri ATCC 29473] gi|238708420|gb|EEQ00775.1| Arginine-binding periplasmic protein 1 [Yersinia ruckeri ATCC 29473] Length = 243 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 75/213 (35%), Gaps = 12/213 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ F + AN +GFD+D AL + + + +L+ Sbjct: 22 TIRFAAEASYPPFEFIDANNKMQGFDIDLANALCKEM---QATCTFTNQAFDSLIPSLKF 78 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K+ D + D T R + F Y + FI K ++ ++ L G + +Q GT Sbjct: 79 KRFDAVISGVDITPERLKQVA--FTQPYYDNSALFIAQKG-KVTDLAALKGKRVGMQNGT 135 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR--PS 212 T + L + + ++ + + R DA GD + + ++ P Sbjct: 136 THQRFLLEKHPE----ITAVPYDSYQNAILDLKNGRLDAVFGDTAVVNEWLKQSEELAPV 191 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + I + L A+ Q +TE + Sbjct: 192 GNKISDADYFGTGLGIAVRQNNTELLGKLDAAL 224 >gi|229526417|ref|ZP_04415821.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae bv. albensis VL426] gi|229336575|gb|EEO01593.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae bv. albensis VL426] Length = 278 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 79/243 (32%), Gaps = 12/243 (4%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 + +++ L IK+RG L+ G++T V +A G+ GF++D + L++ Sbjct: 24 AFTLPAVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW 82 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++++P AL +K+ D++ T R S + F G +K Sbjct: 83 ---QVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAANK 137 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 K V+ + K + F+ + A Sbjct: 138 KLAEGFTQLEDFNKRNVKIAARRGAFTVQVARETFPKASVLQFDDDAQAFQEVINGNAHA 197 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWTHYAM 248 + + + + +SK A A+ G+ + I T Sbjct: 198 VIASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKKAYFDQWIADRTADGW 256 Query: 249 VTA 251 + A Sbjct: 257 LQA 259 >gi|330821899|ref|YP_004350761.1| Cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia gladioli BSR3] gi|327373894|gb|AEA65249.1| Cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia gladioli BSR3] Length = 260 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 73/224 (32%), Gaps = 13/224 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K ++ G++ F A+G GFD+D + I +K ++ + Sbjct: 23 KDWSTVRFGVDASYPPFESKGADGKLVGFDIDLGNEICRRI---AAKCVWVENDFDGMIP 79 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASIC 149 AL++++ D + + T R + F + + + + L G ++ Sbjct: 80 ALKARKFDGVLSSMSMTPQRAEQIA--FSAKLFNTPTRLVAKDGAKLLPTADSLKGKTVG 137 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ GT E Y+ + ++ +++ A + R DA D L Sbjct: 138 VEQGTIQETYAKTYWAPKG--VTVVPYQNQDQVYADLLSGRLDATLQDAVQAEIGFLKTP 195 Query: 210 RPSEHVIL-----PDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 R + + + DT+ + AM Sbjct: 196 RGKGYAFAGGDIDDPKTLGEGAGVGLRKEDTDLKAKIDGAIAAM 239 >gi|209546331|ref|YP_002278221.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539188|gb|ACI59121.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 276 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 73/223 (32%), Gaps = 11/223 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 A +IK RG + GI + V + G G D D + + +++ Sbjct: 27 PAAAITPDEIKARGKIIVGIQGDNPPWGFVTSGGKQDGLDADIATLFAKELG---VSVEF 83 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +PL R AL + ++D+L L + + + F + I K I + Sbjct: 84 VPLEVNNRIPALTAGRVDVLFATMAM--LPDRAKAVQFSKPYVANAIVLIGPKSAEIKTN 141 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + ++ ++ V G + + ++ A + + D G+ Sbjct: 142 ADMAKFTVGVAKGAAQDTQVTKNAPE---GTTIRRYDGDAASVQALVSGQVDTLGGN--I 196 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 Y ++ RP E + K G+ E ++ Sbjct: 197 FYMDRVNKARPGEFENKLE-FQKLYNGACTRLGEKEINAALNT 238 >gi|289178329|gb|ADC85575.1| ABC transporter amino acid-binding protein [Bifidobacterium animalis subsp. lactis BB-12] Length = 363 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 66/229 (28%), Gaps = 13/229 (5%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGFDVDFCRALSSAIFDDPSKIQYL 81 A + +KK G L G +T + +G G+DVD +A++ + +P Sbjct: 112 AALVPDYVKKDGKLTVGTDTTYAPAEFIGEDGKTAVGYDVDLTKAIAKVMGLEPETAV-- 169 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 ++ S + DI + T R + F Sbjct: 170 -SEFDMIIPSIGS-KYDIGISSFTVTPER--QEAVDFVTYYKAGSTWVTQKGNPDKVDTK 225 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMK----YHPIVFERVEEIDAAYRAHRCDAYTGD 197 L G + VQ GTT E L + F + ++ A + A Sbjct: 226 DLCGVKVAVQTGTTQEEELNKMNEQCKADGKKAIELQTFAKQTDVTTAVVNGKA-AVFYA 284 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 S + + + + D + +GD + V Sbjct: 285 DSPVAGYAIEQTDGALAPLGADEGVTEE-GIIVKKGDKQMDEAVQKAVQ 332 >gi|319779072|ref|YP_004129985.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Taylorella equigenitalis MCE9] gi|317109096|gb|ADU91842.1| Lysine-arginine-ornithine-binding periplasmic protein precursor [Taylorella equigenitalis MCE9] Length = 259 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 84/246 (34%), Gaps = 26/246 (10%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 +L + + + +A + ++ G + F + A G+ GFD+D +A+ Sbjct: 7 VLLAGFMASTMAGAVHA-------EDKVIRFGSDATYAPFEYMNAEGEVIGFDIDIAKAM 59 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + +K + AL++K+ D+++ + T R+ +AF + + Sbjct: 60 CERM---KAKCTFQNQAWDGIIPALRAKKFDVIASSMSITPERQK--AVAFTKMIWNSPN 114 Query: 128 GFIMHKKKGISSVSQ-LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 + K + G I VQ T + YFK ++ ++ Sbjct: 115 PLVGKKGATAQPTVEGTKGKVIGVQQATIQDRYATKYFK----DAQIKRYKTFDDALNDL 170 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPD--IISKSP------LAPAIIQGDTEWY 238 R + D+ L + + ++ + D + P A+ + D E Sbjct: 171 VLGRVELVFCDVGVG-DEFLKSSKGADFEFIGDAVLSKDDPEIFGVGTGFAVRKQDKELL 229 Query: 239 NIVSWT 244 ++ Sbjct: 230 ESLNKA 235 >gi|291519630|emb|CBK74851.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [Butyrivibrio fibrisolvens 16/4] Length = 262 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 74/257 (28%), Gaps = 15/257 (5%) Query: 1 MYKDFFVSILC-LIILFFTSFSTNASILGDIKKRG---FLKCGINTGLVGFAEVKANGDW 56 M K +L ++ L + + + G K +T F NGD+ Sbjct: 1 MRKRLISGLLTGVMALSLVACGGTSGTGTSDNQSGSDKVWKIATDTSFKPFEYTDNNGDF 60 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D+D A++ L A Q+ Q D L T R G Sbjct: 61 VGIDMDILAAVAEDQGFKYEV---QVLGWDASIAACQAGQADALMAGASITDER-KGSGW 116 Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 F Y Q + I LSG S+ V+ GT + + + + F Sbjct: 117 IFSDGYYDANQSMAVESSSDIKGFEDLSGKSVAVKTGTMSASYAESL--SADYDFTVTYF 174 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP--LAPAIIQGD 234 E + A + A D + + + D P AI D Sbjct: 175 EDSPTMYQAVVGGQVAACFDDTPIMA---SNIKDTGIALKILDGTGNDPASYGFAIFNAD 231 Query: 235 TEWYNIVSWTHYAMVTA 251 + + T + A Sbjct: 232 NQELVDMFNTGLKNIKA 248 >gi|254360618|ref|ZP_04976767.1| possible arginine ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica PHL213] gi|153091158|gb|EDN73163.1| possible arginine ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica PHL213] Length = 241 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 75/247 (30%), Gaps = 28/247 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S + L + + + F G+ GFD Sbjct: 1 MKKLLLASAIAFATLSANAQE-------------TITFAMEPSYAPFETTNEKGEVIGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL + + ++ + L+ K D + D T R+ + F Sbjct: 48 VDIAKALCEEL---KATCEFKTQSFDSLIAGLKFKNFDAIISGMDITEARQKQVA--FTN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++ K K + ++ VQ GTT + L+ K +Y+ + ++ Sbjct: 103 AYLENSVSYVAMKGKFTPETA----KNVGVQNGTTFQQYLSKNAK----QYNLKPYASLQ 154 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD L T ++ + A+ + +T Sbjct: 155 SAVLDLKNGRVDMVFGDTPVLAEWLKTEKELDFVGEKVVDKAFFGNGYGIAVNKSNTALL 214 Query: 239 NIVSWTH 245 ++ Sbjct: 215 EKLNSAL 221 >gi|189425448|ref|YP_001952625.1| amino acid ABC transporter periplasmic protein [Geobacter lovleyi SZ] gi|189421707|gb|ACD96105.1| extracellular solute-binding protein family 3 [Geobacter lovleyi SZ] Length = 260 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 76/215 (35%), Gaps = 15/215 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 L+ GI A ++ +G G + D + L+ +++Y + ALQS Sbjct: 29 LRVGIAPTYPPLAFMQ-DGVLAGIEPDLAQQLAKQTG---RRVRYEIIPFDRLITALQSG 84 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS----GASICVQ 151 Q+D++ T R ++F GQ ++ +K L G + V+ Sbjct: 85 QVDLIMAGMSITAER--QGQISFTNSYLKVGQMLLIREKDIKRFPRALFDQSAGVRVGVE 142 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 G+T E F I F+ E A D + D ++ Sbjct: 143 KGSTGEQYALKTFAWGG----VIHFDTTEAGIRALEQGSIDCFVHDAPTVWRFSADLATQ 198 Query: 212 SE-HVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + V L + ++ PLA A+ + D + ++ Sbjct: 199 HQGLVGLFEPLTDEPLAWAVRKNDPALLDQLNQEL 233 >gi|260462070|ref|ZP_05810315.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|259032317|gb|EEW33583.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] Length = 265 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 65/214 (30%), Gaps = 10/214 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G F +G ++GF+VD + L + F A S Sbjct: 29 VLNVGAYPTNPPFEYKNESGTFEGFEVDIVNEAAKRAG---MTTDIADLGFQALFAATTS 85 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K+ID+ + T R +F Y G +++ + L G + V +G+ Sbjct: 86 KRIDVAISSITITPER--LKSQSFTQPYYDSDMGIATKTDSAVNTEADLKGKIVGVLSGS 143 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T E + + +A ++ + + A R DA DI + Sbjct: 144 TGETWVKGHQEADGFS-DVKGYDTQQNLLLDLSAGRVDAAVSDIPGMEYSFTKMKDLKVK 202 Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 + + + ++ AM Sbjct: 203 QRIKTG---EQYGLMMTKDHP-LLGKLNDALTAM 232 >gi|153011396|ref|YP_001372610.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151563284|gb|ABS16781.1| extracellular solute-binding protein family 3 [Ochrobactrum anthropi ATCC 49188] Length = 277 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 39/232 (16%), Positives = 77/232 (33%), Gaps = 10/232 (4%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVD 62 S ++ F+ + + L IK RG L+ G+ G + + A G+W GF V Sbjct: 10 TLLGSAAVMLAPGFSWAVEDGATLKSIKDRGALRIGVFNGTPPYYQKNLATGEWDGFCVS 69 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R L+ I ++ + + LQ +IDI+ R + F Sbjct: 70 MGRDLAEYIG---VPLEMVETTWGNSVMDLQGGKIDIMFA-LSNNPERAK--SVDFTEAM 123 Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182 + I K + + + +L+ I V + L + + + + +E Sbjct: 124 MDNVFTVITGKDREVKNWEELNKPEIRVTVDLGSTQDL--FARKTLPNCTLVALKGADET 181 Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 A ++ R D V +P+ + P + + + Sbjct: 182 VIALQSGRADVIVQVALMSVVTAHKLGN-KFKVFVPEPLDSQPTTIGVRKDE 232 >gi|322386877|ref|ZP_08060501.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus cristatus ATCC 51100] gi|321269159|gb|EFX52095.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus cristatus ATCC 51100] Length = 289 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 81/249 (32%), Gaps = 13/249 (5%) Query: 2 YKDFFVSILC----LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57 K + L + + S++AS K+ ++ G F+ +G Sbjct: 16 KKILKYTATAVVGSLAVGLLVACSSSASK-DSATKKKTIEVGTVGTTKPFSYEDKDGKLT 74 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G++++ R + D ++ + F L S + I + N + + Sbjct: 75 GYEIEVLREIFK--GSDKYEVNFNKTKWASVFSGLDSDRYQIGANNIS--YSEDRAGKYL 130 Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + + ++ K I S+ + G S V GT+T L Y + H+ I + Sbjct: 131 YTNPYAKNPTVLVVRKGVNIKSLDDIGGKSTEVVQGTSTAKQLEKYNEEHSSNPTTINYT 190 Query: 178 R--VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGD 234 +++I A R D + + + ++ + P + G Sbjct: 191 DGTIQQILANLNDGRSDYKIFER-ITVDTIIKDQGLDNVEVIELPSDQQPYVYPILASGQ 249 Query: 235 TEWYNIVSW 243 E ++ Sbjct: 250 EELQTFMNK 258 >gi|154487057|ref|ZP_02028464.1| hypothetical protein BIFADO_00895 [Bifidobacterium adolescentis L2-32] gi|154084920|gb|EDN83965.1| hypothetical protein BIFADO_00895 [Bifidobacterium adolescentis L2-32] Length = 516 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 36/257 (14%), Positives = 82/257 (31%), Gaps = 18/257 (7%) Query: 5 FFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 F + + F T + ++ +K + K G +T F NG G D Sbjct: 21 LFAVLAVVFAAFMTTVPHALASETGNPASVKGK-TYKIGTDTTFAPFEYR-ENGKMTGID 78 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ R ++ + K++ L AL S Q+D++ T R+ F Sbjct: 79 MELIRGIAKE---EGFKVEIQSLGFNAALQALSSNQVDVVIAGMSITDERKA--SYDFSN 133 Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + ++ L G ++ + G+ E + + K + ++ Sbjct: 134 PYFQSGIQMAVAANNDDVTGYKDLKGRTVVAKTGSEGESYAKQHADKYGYKVTSV--DQS 191 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWY 238 + ++ A D L ++ P + A+ + + + Sbjct: 192 STMYEMVKSGNAVAVFDDYPVLAYGVSQ--NNGLKIVTPKVPHGE-YGMAVNKGMNADLL 248 Query: 239 NIVSWTHYAMVTAEELG 255 ++ M+ + E Sbjct: 249 AAINDGLNKMIASGEYE 265 >gi|206576680|ref|YP_002240880.1| polar amino acid ABC transporter (PAAT) family, periplasmic amino acid-binding protein [Klebsiella pneumoniae 342] gi|206565738|gb|ACI07514.1| polar amino acid ABC transporter (PAAT) family, periplasmic amino acid-binding protein [Klebsiella pneumoniae 342] Length = 243 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 72/219 (32%), Gaps = 11/219 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G T F GFD+D AL + ++ Q+ AL+ Sbjct: 22 TLHFGTTTANPPFVTTNGKNQPVGFDIDLAHALCQQM---QAQCQFTAQRFDTLIPALRF 78 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K+ D + + +RE + F G ++ K + + L I V GT Sbjct: 79 KKFDAVIAGMEVIPMREKQVA--FSRPYRQALSGVVIVNKDVAHTFADLKAKKIGVVKGT 136 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP--S 212 + L D KA I ++ V AA +A D + L A + N Sbjct: 137 LHQHYLRDKQKA----VQAIPYDDVASALAALKAGEITGVMSDFATLDAWQQENPDYAIM 192 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 + A A+ + D E N ++ A++ Sbjct: 193 DERATDPAYYGKQYAIAVRKDDPELLNAINDALTAVMAT 231 >gi|170694323|ref|ZP_02885477.1| Arogenate dehydratase [Burkholderia graminis C4D1M] gi|170140746|gb|EDT08920.1| Arogenate dehydratase [Burkholderia graminis C4D1M] Length = 265 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 81/272 (29%), Gaps = 24/272 (8%) Query: 1 MYKDFFVSILCLIILF---------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M K + + + + AS L DI RG L+ ++ K Sbjct: 1 MKKVALALLSVVAGVLIHSGAVQAQASGTPATASRLDDILARGTLRACTTGDYKPYSFYK 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 +G ++G D+D +L+ ++ ++ N F+A + DI TL R+ Sbjct: 61 TDGQFEGIDIDMTESLAKSLGVKAEYVKTSWSNLMNDFVA----KCDIGVGGVSPTLERQ 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK----GISSVSQLSGASICVQAGTTTELTLADYFKAH 167 F DG+ I+ + + V G T E +F Sbjct: 117 K--RAFFTQAYMVDGKTPIVRCDDVNKYQTVAQIDQPATRVIVNPGGTNERFAKQFFSHA 174 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 NM V+ I A + D D S L+ + V A Sbjct: 175 NMT----VYPDNVTIFKQILAGKADVMVTDASETL-LQQKLNPGLCSVHPDKPFQYGEKA 229 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 + +GD + V + E Sbjct: 230 WLLPRGDVAFQQYVDQWLHLARATGEYQAVSD 261 >gi|94986058|ref|YP_605422.1| extracellular solute-binding protein [Deinococcus geothermalis DSM 11300] gi|94556339|gb|ABF46253.1| amino acid ABC transporter substrate-binding protein, PAAT family [Deinococcus geothermalis DSM 11300] Length = 222 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 77/220 (35%), Gaps = 13/220 (5%) Query: 39 GINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL-ALQSKQI 97 G + F NG +GFD+D RA++ + +++ + A+ S ++ Sbjct: 3 GTDPTFAPFEFAGPNGQVQGFDIDIARAIAQDLG---VRLEVRAVGFGALMPQAVTSGRV 59 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTT 155 D+ T R ++F Y Q FI+ + + + G I VQA TT Sbjct: 60 DMAMSGITITPERAKV--VSFSAPYYRSAQVFIVRGGNPGKFAWPADVKGRVIGVQANTT 117 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 + D K V++ A RA R A GD + L+ P + Sbjct: 118 GQYAAGDLLKPKG--ATIKVYDDFAAGLADVRAGRVAALIGDAPTVADLQKRL--PGQFQ 173 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + A+ +G ++ + T + + E Sbjct: 174 QAGKPLVAEDYGIAVQKG-SDLAAAANQTLARLKASGEYQ 212 >gi|320547054|ref|ZP_08041352.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] gi|320448291|gb|EFW89036.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] Length = 733 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 76/222 (34%), Gaps = 11/222 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 K +++ F +G ++G DVD +A++ + I+ A+Q+ Sbjct: 280 TYKIVMDSSFAPFEYQNDSGKYEGIDVDLIKAIAEQQGFN---IELSNPGFDAALNAVQA 336 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 Q D + T R+ F Y + K + S L+G ++ + GT Sbjct: 337 GQADAVIAGMSITDARKEI--FDFSDPYYTSNILLAVKKGSSVKSYEDLNGMTVGAKNGT 394 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + L+++ + F+ + + + DA D L+ + + Sbjct: 395 ASYTWLSEHADQYGYS--LRAFDEASTMYDSLNSGSIDALMDDE---AVLRYAIKQGRKF 449 Query: 215 VILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEELG 255 D A+ +G + E + + A+V + + Sbjct: 450 ETPIDGEKSGEYGFAVNKGANPELLEMFNNGLAALVKSGKYD 491 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 68/211 (32%), Gaps = 17/211 (8%) Query: 1 MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M +L +I F + A + +T F ++ +KG Sbjct: 1 MKHKLKAIMLAMISAIFVFGANAQADT---------ISVVSDTAYAPFEFKDSDQVYKGI 51 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD +++ D ++ A+Q+ Q D L T T R+ F Sbjct: 52 DVDIINEVANREGWD---VKMTFPGFDAAVNAVQAGQADALMAGTTVTEARKKV--FTFS 106 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y +++ QLSG ++ V+ GT + L + K +N K F+ Sbjct: 107 DTYYDTAVVVYTRSNAKVTNYKQLSGKTVGVKNGTAAQSFLKENQKKYNYK--IKTFDTS 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + ++ + A D + Sbjct: 165 DLMNNSLDTGSIYAAMDDQPVVQYAINQGKD 195 >gi|317009598|gb|ADU80178.1| putative polar amino acid transport system substrate-binding protein [Helicobacter pylori India7] Length = 258 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 32/250 (12%), Positives = 75/250 (30%), Gaps = 13/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ +L + FF F +S+ + + + G F G G+D Sbjct: 1 MKKVLFLFLLVIG--FFGGFLNASSLYERLINKETISVGTEGIYPPFTYHNKEGKLTGYD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R L+ + I++ + L+S + D+++ T ++ Sbjct: 59 VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQAAFDKSL 114 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G ++ K I + + G +T A + + + Sbjct: 115 PYSYSGTIMLVRKDENRIKDIKDIKGLRAANTLSSTYGEI------ASKYDAQIVSVDSM 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R D A+ T+ + + I + + Sbjct: 169 VQALLLVAQKRADLTLNSSLAILNYLNTHKNTPFKIAWESKEKDGGASFVINKRQEKALE 228 Query: 240 IVSWTHYAMV 249 +++ ++ Sbjct: 229 LINQAVQRLI 238 >gi|304396841|ref|ZP_07378721.1| Prephenate dehydratase [Pantoea sp. aB] gi|304355637|gb|EFM20004.1| Prephenate dehydratase [Pantoea sp. aB] Length = 289 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 77/257 (29%), Gaps = 16/257 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L +S S L I L+ ++ ++ +G ++G D Sbjct: 36 MKKIVFSLLLA------SSAVQAQSHLDTILSSKTLRVCTTGDYKPYSFLRPDGQYEGLD 89 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + AL++++ +K++++P K +KQ DI TL R+ + A Sbjct: 90 ISMANALATSLG---AKVEWVPTTWKTLMPDFLAKQCDIAVGGVSVTLKRQQTAWFARPL 146 Query: 121 ITYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 K ++ QL + AG T E + + +F Sbjct: 147 DVDGKIPLVRCTDKDRFQTIEQLNRPDVRLIEPAGGTNEAFVHSHLPKA----SLTLFHD 202 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 I + D D S + + A I + D W Sbjct: 203 NVTIFQQLVDKKADVMITDASEARFQQQHYPTLCAINPDKPLQYGE-KAYMIPRDDISWK 261 Query: 239 NIVSWTHYAMVTAEELG 255 V + E Sbjct: 262 LYVDQWVHLSTATGEYR 278 >gi|171779918|ref|ZP_02920822.1| hypothetical protein STRINF_01705 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281266|gb|EDT46701.1| hypothetical protein STRINF_01705 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 271 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 87/276 (31%), Gaps = 18/276 (6%) Query: 1 MY-KDFFVSILC---LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKAN 53 M K + L + L S+N ++ + K+G L I+ F V Sbjct: 1 MKIKKLVLGALTFVSVFALAACGSSSNENLQEKVVKKGKLVVAISPDYAPFEFKTLVNGK 60 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G DV+ +A++ + ++ ++ +LQ+ + DI T R Sbjct: 61 DTIVGADVELAKAIADELGVK---LELSSMSFDNVLSSLQTGKADIAISGLSATKER--K 115 Query: 114 LGLAFRPITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F Y ++ +S+S LSG + VQ GT E D K Sbjct: 116 NAYDFSDPYYETENAILVKTSNLDKFTSISSLSGQKVAVQKGTIEEGLAKDQLK----DS 171 Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231 + + E ++ + A + N + A A+ Sbjct: 172 KIVSLTAMGEAINELKSGQVQAVDLEKPVAEGYLSQNSDIALAGFALKTSDGDAKAVAMP 231 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267 +G E V+ + ++ + Q++ + Sbjct: 232 KGSGEMVKTVNKVIKKLAKDDKYKKYISDAAQLTAN 267 >gi|241666978|ref|YP_002985062.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862435|gb|ACS60100.1| extracellular solute-binding protein family 3 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 276 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 77/235 (32%), Gaps = 11/235 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 A +IK RG + GI + V + G G D D + + +++ Sbjct: 27 PAAAVTPDEIKARGKIIVGIQGDNPPWGFVTSGGKQDGLDADIATLFAKELG---VSVEF 83 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +PL R AL + ++D+L L + + + F + I KK I + Sbjct: 84 VPLEVNNRIPALTAGRVDVLFATMAM--LPDRAKAVQFSKPYVANAIVLIGPKKAEIKTN 141 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 + ++ ++ V G + + ++ A + + + G+ Sbjct: 142 ADMAKFTVGVAKGAAQDTQVTKNAP---PSTTIRRYDGDAASVQALVSGQVETLGGN--I 196 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 Y +L RP E + K G+ E ++ + EL Sbjct: 197 FYMDRLEKARPGEFENKLE-FQKLYNGACTRLGEKEINAALNTFIDKIKANGELK 250 >gi|292487758|ref|YP_003530631.1| glutamine ABC transporter periplasmic protein [Erwinia amylovora CFBP1430] gi|292898987|ref|YP_003538356.1| glutamine ABC transporter substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291198835|emb|CBJ45945.1| glutamine ABC transporter, substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291553178|emb|CBA20223.1| glutamine ABC transport system, periplasmic component [Erwinia amylovora CFBP1430] Length = 249 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 74/214 (34%), Gaps = 12/214 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 L +T V F + G + GFD+D A++ + + P++ ALQ Sbjct: 26 KKLVVATDTAFVPFEFKQG-GQYVGFDIDLWDAIAKQLNMEY---TLKPMDFSGIIPALQ 81 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152 ++ ID+ T R+ +AF Y G ++ + + L+G + V++ Sbjct: 82 TRNIDLALAGITITDERKK--AIAFSDGYYKSGLLVMVKANNDAVKGIEDLNGKVVAVKS 139 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT + + K F ++ +R DA D + T + Sbjct: 140 GTGSVDYAKQHIKYK----DLRQFPNIDNAYMELGTNRADAVLHDTPNILYFINTAGKG- 194 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + I A +G + V+ Sbjct: 195 QFKAVGNSIEAQQYGIAFPKGSDDLREKVNGALK 228 >gi|254477971|ref|ZP_05091356.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Ruegeria sp. R11] gi|214028556|gb|EEB69392.1| polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein [Ruegeria sp. R11] Length = 259 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 95/257 (36%), Gaps = 27/257 (10%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDV 61 K ++L + L T+ A +K G+ FA + ++G W G+++ Sbjct: 5 KTIRKTLLTTVALAATAVMAQAEP---------VKIGVAAEPYPPFASLDSSGTWVGWEI 55 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D A+ +A + P+ +L +QID + + T R + + F Sbjct: 56 DVINAVCAAA---ELECVITPVAWDGIIPSLTGQQIDAIMASMSITEERLKT--IDFSDP 110 Query: 122 TYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y + K I + + L G + +QA T + YF V++ + Sbjct: 111 YYNTPAVIVADKSMDIDATPASLEGKIVGIQASTIHQAYAQKYF----TGAELRVYQTQD 166 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQGDT 235 E + A R DA T S A + +D + I + + + + +G+T Sbjct: 167 EANQDLFAGRIDA-TQADSIAMADFVGSDAGACCEIKGAVANDEAILGKGVGAGVRKGET 225 Query: 236 EWYNIVSWTHYAMVTAE 252 + ++ AM+ A+ Sbjct: 226 DILEALNKGI-AMILAD 241 >gi|24379263|ref|NP_721218.1| putative glutamine ABC transporter, permease protein [Streptococcus mutans UA159] gi|24377179|gb|AAN58524.1|AE014921_9 putative glutamine ABC transporter, permease protein [Streptococcus mutans UA159] Length = 728 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 75/211 (35%), Gaps = 17/211 (8%) Query: 1 MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M F +L ++ + F + +A +K ++ F ++ +KG Sbjct: 1 MKNKFKALMLGILSVIFMFGAKVSADT---------VKIVSDSTYAPFEFKDSDQVYKGI 51 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD + ++ + K+ + +A A+QS Q D L T T RE F Sbjct: 52 DVDIIKK-AAEMSGWNYKMTFPGFDAAVN--AVQSGQADALMAGTTVTKEREKV--FTFS 106 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y K+ I+ SQL G ++ V+ GT + L + + K F+ Sbjct: 107 HTYYDTKIVIATRKQDKITKYSQLKGKTVGVKNGTAAQSFLEKHQDKYGYK--IKSFDTG 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + DA D + Sbjct: 165 DSMYNSLESASVDAVMDDKAVAQYAINQGQN 195 Score = 92.5 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 63/220 (28%), Gaps = 11/220 (5%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 K +++ F G + G DV+ +A++ KI+ +QS Q Sbjct: 276 KVVMDSSFAPFEFQNDAGQYVGIDVELIKAIAKQ---QGFKIKTENPGFDAALNTVQSSQ 332 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 D + T R+ F Y + K + S L G + + GT + Sbjct: 333 ADAVMAGMSITDDRKKI--FDFSDPYYTSNTLLAVRKGSNVVSYKDLKGKKVGAKNGTAS 390 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 L Y F+ + + + A D LK + + Sbjct: 391 YTFLEKN--KAKYGYTLKSFDEASTMYDSLNSGSIYALMDDE---AVLKYAIQQGRKFET 445 Query: 217 LPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255 A+ + E + + A+ + + Sbjct: 446 PIPGEKSGEYGFAVKKGSSPELIQMFNNGLAALKKSGQYD 485 >gi|307709473|ref|ZP_07645930.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus mitis SK564] gi|307619787|gb|EFN98906.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus mitis SK564] Length = 721 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 17/210 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F +L L +F I K +K +T F ++ +KG D Sbjct: 1 MKKKFLAFLLILFPIFSLG----------IAKTEMIKIVSDTAYAPFEFKDSDQTYKGID 50 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ + IQ A+Q+ Q D + T RE Sbjct: 51 VDIINKVAEIKGWN---IQMSYPGFDAAVNAVQAGQADAIMAGMTKTKEREKV--FTMSD 105 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K IS QL+G ++ V+ GT + L + F+ + Sbjct: 106 TYYDTKVVIATTKAHKISKYDQLTGKTVGVKNGTAAQRFLETI--KDKYSFTIKTFDTSD 163 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + A DA D + Sbjct: 164 LMNNSLSAGAIDAMMDDKPVIEYAINQGQD 193 Score = 95.2 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 67/231 (29%), Gaps = 16/231 (6%) Query: 1 MYK-----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K + +T A L I + ++ F ++ Sbjct: 230 MKKDGSLDKIIKKWTASSSSAVPTTTTLAG-LKAIPVKAKYIIASDSSFAPFVFQNSSNQ 288 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 + G D++ +A++ + I+ A+Q+ Q D + T R+ + Sbjct: 289 FTGIDMELIKAIAKDQGFE---IEITNPGFDAAISAVQAGQADGIIAGMSVTDARKAT-- 343 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F Y + + I+S L G ++ V+ GT ++ L + K Sbjct: 344 FDFSESYYTANTILGVKESSTIASYEDLKGKTVGVKNGTASQTFLTKNQSKYGYK--IKT 401 Query: 176 FERVEEIDAAYRAHRCDAYTGDISA---LYALKLTNDRPSEHVILPDIISK 223 F + + DA D + P + + Sbjct: 402 FADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPIAGTPIGETAFA 452 >gi|317053694|ref|YP_004118828.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] gi|316952799|gb|ADU72272.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b] Length = 267 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 87/252 (34%), Gaps = 26/252 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG-FLKCGINTGLVGFAEVKANGDWKGF 59 M S + L+ + + S A G L+ G + F A G GF Sbjct: 1 MK-----SAVTLLTVMTMALSAQA------LAAGETLRVGADLSYPPFQYRDAAGTPTGF 49 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 ++D A+ A+ K +Y+ + +L ++++D + T R+ + F Sbjct: 50 EIDITNAVCKAV---QVKCEYVVSSFDAEIPSLMARKVDFI-SPLGATAKRQK--SIDFS 103 Query: 120 PITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y + HK + V+ L G I VQ G+ E+ Y+ + +++ Sbjct: 104 DFIYHIPTKLVAHKGSNLQPDVTSLQGKRIAVQQGSIQEMYANKYWAPKGVD--VVMYPD 161 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-----APAIIQG 233 + I A R D A+ L + + + L A + +G Sbjct: 162 QDVIYQDLAAGRLDGALSPGVAVTYGFLNKPEGKDFALTGPEVRDDLLFSIGSAYGVRKG 221 Query: 234 DTEWYNIVSWTH 245 D + +++ Sbjct: 222 DEKMQKLLNEGL 233 >gi|222106502|ref|YP_002547293.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] gi|221737681|gb|ACM38577.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] Length = 279 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 80/223 (35%), Gaps = 11/223 (4%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80 + A L K +G + GI + V ++G G D D +A + + + Sbjct: 30 TAFAGTLEQAKAKGKVVIGIQGDNSPWGFVNSSGVQDGLDADIGKAYADYLGVKAE---F 86 Query: 81 LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140 +PL R AL + ++DIL T R ++ F + K K I S Sbjct: 87 VPLAVANRIPALMTGKVDILFATMGMTADRAKTIQ--FSKPYAGNVLSVYGPKDKKIGSY 144 Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200 L+G S+ V + + + K + F+ A + + +A G+ Sbjct: 145 DDLTGVSVGVPKSSAMDTAITAGA---GSKASILRFDDDAANIQALISGQVEAVGGN--Q 199 Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 Y +L ++ D+++ + G+ +W ++ Sbjct: 200 FYGDRLNAAAAGKYETKFDLVTL-YNGAGMRPGEKDWNESINS 241 >gi|119025595|ref|YP_909440.1| glutamine ABC transporter (binding and transport protein) [Bifidobacterium adolescentis ATCC 15703] gi|118765179|dbj|BAF39358.1| similar to glutamine ABC transporter (binding and transport protein) [Bifidobacterium adolescentis ATCC 15703] Length = 501 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 36/257 (14%), Positives = 82/257 (31%), Gaps = 18/257 (7%) Query: 5 FFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 F + + F T + ++ +K + K G +T F NG G D Sbjct: 6 LFAVLAVVFAAFMTTVPHALASETGNPASVKGK-TYKIGTDTTFAPFEYR-ENGKMTGID 63 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ R ++ + K++ L AL S Q+D++ T R+ F Sbjct: 64 MELIRGIAKE---EGFKVEIQSLGFNAALQALSSNQVDVVIAGMSITDERKA--SYDFSN 118 Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + ++ L G ++ + G+ E + + K + ++ Sbjct: 119 PYFQSGIQMAVAANNDDVTGYKDLKGRTVVAKTGSEGESYAKQHADKYGYKVTSV--DQS 176 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWY 238 + ++ A D L ++ P + A+ + + + Sbjct: 177 STMYEMVKSGNAVAVFDDYPVLAYGVSQ--NNGLKIVTPKVPHGE-YGMAVNKGMNADLL 233 Query: 239 NIVSWTHYAMVTAEELG 255 ++ M+ + E Sbjct: 234 AAINDGLNKMIASGEYE 250 >gi|330684937|gb|EGG96617.1| ABC transporter, substrate-binding protein, family 3 [Staphylococcus epidermidis VCU121] Length = 260 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 77/256 (30%), Gaps = 12/256 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F I + +L ++N K ++ G F G+D Sbjct: 1 MKRLLFCVIALVFVLAACGNNSNKDSKSSSKDDNTIRVGTEGTYAPFTFHNKQDKLTGYD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + K+++ + F L + + D+++ RE F Sbjct: 61 IDVIKAVAKE---EGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINKDREKKYK--FSN 115 Query: 121 ITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + ++ +K I S + + G + Q T+ LA A + Sbjct: 116 PYTYSSAVLVVRENEKNIKSFNDVKGKKLA-QTFTSNYGQLAKDKGAK-----ITKVDGF 169 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + ++R DA D + K I D + D + Sbjct: 170 NQSMDLLLSNRVDATFNDSLSYLDYKKQKPNAKIKAIKGDAEKNKSAFAFSKKVDDKTVQ 229 Query: 240 IVSWTHYAMVTAEELG 255 + + EL Sbjct: 230 KFNDGLKKIDENGELK 245 >gi|317011146|gb|ADU84893.1| putative polar amino acid transport system substrate-binding protein [Helicobacter pylori SouthAfrica7] Length = 255 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 75/251 (29%), Gaps = 16/251 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +LCLII F F +S+ + + + G F G G+D Sbjct: 1 MKK-----VLCLIISLFWGFLNASSLYEKLINKETISVGTEGIYPPFTYHDKEGKLTGYD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R L+ + I++ + L+S + D+++ T ++ Sbjct: 56 VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQATFDKSL 111 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G ++ K I + + G +T A + + + Sbjct: 112 PYSYSGTIMLVRKDENRIKDIKDIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSM 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R D A+ T+ + + I + + Sbjct: 166 AQALLLVAQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALE 225 Query: 240 IVSWTHYAMVT 250 +++ ++ Sbjct: 226 LINQAMQKLIN 236 >gi|308186222|ref|YP_003930353.1| Arginine-binding periplasmic protein 2 precursor [Pantoea vagans C9-1] gi|308056732|gb|ADO08904.1| Arginine-binding periplasmic protein 2 precursor [Pantoea vagans C9-1] Length = 243 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 73/218 (33%), Gaps = 12/218 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 + ++ + F + + GFD+D +AL + ++ + Sbjct: 18 QAAETIRFAASATYPPFESLDKENNLVGFDIDLAKALCQQM---KAECTFTNNAFDSLIP 74 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150 +L+ ++ D + D T R S + F Y + I K SS L I V Sbjct: 75 SLKFRRYDAVISGMDITTER--SKQVDFTQPYYANSAIVIAPKG-RFSSFGDLKEKRIGV 131 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + GTT + L D + ++ + ++ R D GD + + N Sbjct: 132 ENGTTHQKYLQDKHPE----VKVVAYDSYQNAILDMKSGRLDGVFGDSAVVNQWLKANPD 187 Query: 211 PSE--HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + L A+ +G+T + + Sbjct: 188 LATVGEHVTDADYFGTGLGIAVRKGNTALRDRFNQALT 225 >gi|294666123|ref|ZP_06731380.1| cyclohexadienyl dehydratase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604090|gb|EFF47484.1| cyclohexadienyl dehydratase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 259 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 34/252 (13%), Positives = 80/252 (31%), Gaps = 6/252 (2%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + + + L+ T +T AS L + + G L+ ++ ++ +G ++G D+D Sbjct: 2 RYRICLALLLSCGTTHAATPASRLDAVLQSGVLRVCTTGDYRPYSLLRDDGQFEGSDIDL 61 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 ++L++++ ++ + + + L + + DI TL R+ + Sbjct: 62 VQSLAASL---DARARLVRTSWPHLMPDLLADRCDIAVGGISVTLQRQRQASFSAVLDVD 118 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 + ++ QL+ + + + + +F I Sbjct: 119 GKIPLVRCVDQARYRTLEQLNRPEVRLIEPPGGTN--EAFAHRQLPQATLRLFADNTTIF 176 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 AHR D D S + + A + + D W V Sbjct: 177 QELLAHRADVMITDASEALYQQARLPGLCAIAPEQPLQYSE-KAFLLPRDDHAWKAYVDQ 235 Query: 244 THYAMVTAEELG 255 + + E Sbjct: 236 WLHLTKASGEYQ 247 >gi|290580730|ref|YP_003485122.1| putative glutamine ABC transporter, permease protein [Streptococcus mutans NN2025] gi|254997629|dbj|BAH88230.1| putative glutamine ABC transporter, permease protein [Streptococcus mutans NN2025] Length = 728 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 75/211 (35%), Gaps = 17/211 (8%) Query: 1 MYKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M F +L ++ + F + +A +K ++ F ++ +KG Sbjct: 1 MKNKFKALMLGILSVIFMFGAKVSADT---------VKIVSDSTYAPFEFKDSDQVYKGI 51 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD + ++ + K+ + +A A+QS Q D L T T RE F Sbjct: 52 DVDIIKK-AAEMSGWNYKMTFPGFDAAVN--AVQSGQADALMAGTTVTKEREKV--FTFS 106 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y K+ I+ SQL G ++ V+ GT + L + + K F+ Sbjct: 107 HTYYDTKIVIATRKQDKITKYSQLKGKTVGVKNGTAAQSFLEKHQDKYGYK--IKSFDTG 164 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + + + DA D + Sbjct: 165 DSMYNSLESASVDAVMDDKAVAQYAINQGQN 195 Score = 92.5 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 63/220 (28%), Gaps = 11/220 (5%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 K +++ F G + G DV+ +A++ KI+ +QS Q Sbjct: 276 KVVMDSSFAPFEFQNDAGQYVGIDVELIKAIAKQ---QGFKIKTENPGFDAALNTVQSSQ 332 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 D + T R+ F Y + K + S L G + + GT + Sbjct: 333 ADAVMAGMSITDDRKKI--FDFSDPYYTSNTLLAVRKGSNVVSYKDLKGKKVGAKNGTAS 390 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 L Y F+ + + + A D LK + + Sbjct: 391 YTFLEKN--KAKYGYTLKSFDESSTMYDSLNSGSIYALMDDE---AVLKYAIQQGRKFET 445 Query: 217 LPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255 A+ + E + + A+ + + Sbjct: 446 PIPGEKSGEYGFAVKKGSSPELIQMFNNGLAALKKSGQYD 485 >gi|241766693|ref|ZP_04764534.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241362976|gb|EER58661.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 265 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 75/233 (32%), Gaps = 10/233 (4%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72 I L + + L ++ +G + GI T + + + G DV + ++ + Sbjct: 17 ITLPLGASAQQDGSLKAVQDKGSISLGIPTDYPPYGFMGPDFKPTGVDVAVAQLIADKLG 76 Query: 73 DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132 + ++ R LQS++ID++ R+ + F Q Sbjct: 77 VKADLVP---VSTPNRIPYLQSRKIDVIVSALGKNEERQKV--IDFSVSYAPFFQAVFGP 131 Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 K + S + L+ ++ V GT + L FE AA+ + Sbjct: 132 KNVEVKSFADLADKTLAVTRGTIQDDALQGLAPK---SLKIQRFEDDNATMAAFMTQQTQ 188 Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + A P +I SP + +G+T N ++ Sbjct: 189 FVAVGAAVAAAALQ--KNPKVQAEYKLLIKDSPNYAGVRKGETALLNKINDIL 239 >gi|120609004|ref|YP_968682.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120587468|gb|ABM30908.1| amino acid ABC transporter substrate-binding protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 255 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 89/249 (35%), Gaps = 14/249 (5%) Query: 4 DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 ++ + +FS A + I+K G + F GF+V+ Sbjct: 2 KILKTMATAAVALCAAFSAQARPIDAIQKDGKIIIATEGQFAPFNYFNGT-QLTGFEVEV 60 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 ++ + K+++ L L + D+ + T R S + F + Sbjct: 61 ANLVAKKM---NLKVEWKTLGFDALLTGLGQDRWDVAIASHGVTEER--SKAVTFAAP-H 114 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 + G ++ I + L+G + VQ GT+ + F + Sbjct: 115 YCSGGMVIAMDPAIRTGKDLAGKVVAVQTGTSYLENVKKVPGVK----DVKNFPTDVDAR 170 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 +A + R DA+ D A ++ P + L D++ +APA+ +G+T + + Sbjct: 171 SALTSKRVDAWVTDK--FVAKEVAAKNPKAGLKLGDMLFIEKMAPAVAKGNTGLADAWNK 228 Query: 244 THYAMVTAE 252 +A + A+ Sbjct: 229 A-FAEILAD 236 >gi|86610271|ref|YP_479033.1| amino acid transporter, periplasmic amino acid-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558813|gb|ABD03770.1| amino acid transporter, periplasmic amino acid-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 309 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 65/201 (32%), Gaps = 6/201 (2%) Query: 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88 +I G L+ + L GD +GF+++ L S + ++ +P++ ER Sbjct: 73 EIVDSGRLRVAVKDNLRPLGFRTPQGDLQGFEIELACELGSRLLGSAEAVELVPVSNVER 132 Query: 89 FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148 L Q+D+ T R + F Y DG ++ + S S L G + Sbjct: 133 LQVLADGQVDLAIAQIGITPDRAR--QVEFTSAYYQDGPSLVVARSHNWESWSDLRGGRV 190 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 V G++ L Y + + E + D S L + Sbjct: 191 AVLRGSSAIPLLNRYLP----GVELVPVDSYREGAELLLKGAVQGWAADRSVLAGWLAEH 246 Query: 209 DRPSEHVILPDIISKSPLAPA 229 R SPLA Sbjct: 247 PRRESAAEQQFQFLGSPLATV 267 >gi|258541040|ref|YP_003175539.1| glutamine ABC transporter substrate-binding protein [Lactobacillus rhamnosus Lc 705] gi|257152716|emb|CAR91688.1| ABC transporter, glutamine-binding periplasmic protein [Lactobacillus rhamnosus Lc 705] Length = 484 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 98/309 (31%), Gaps = 21/309 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + +S+L + L + + +K G + F + + G D Sbjct: 1 MKRKWLLSLLVALPLMLGALI-PGKTVAAAQK--TYTIGTDVTFAPFEFANQDNKYVGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + K++ PL AL++KQID + T R+ Sbjct: 58 LDLIKAIAKE---EGFKVEIKPLGFNAAVQALEAKQIDGVIAGMSITPERK--QKFLMSD 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + KK I S+ L G + ++ GT + + + F+ Sbjct: 113 PYYKSGVVMAVAKKSKIKSLKDLRGKRVAIKTGTDSADYANSI--KQKYGFTTVTFDDSN 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A D + + + ++ + A + + + Sbjct: 171 NMYQDVITGNSAACFEDQPVM---QYGINNGMALKLVGKPAREGSYGFAASKNNQALISK 227 Query: 241 VSWTH--------YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292 + Y + LG + + + + F+G+ K++ GL Sbjct: 228 FNTGLKKLRANGQYDKIIEHYLGNGSAESQKTAAGNSQTTDRSFIGLLKANWSTLMDGLR 287 Query: 293 KDWTYRIIR 301 + I+ Sbjct: 288 ETMVLTIVA 296 >gi|239943258|ref|ZP_04695195.1| putative serine/threonine protein kinase [Streptomyces roseosporus NRRL 15998] gi|239989717|ref|ZP_04710381.1| putative serine/threonine protein kinase [Streptomyces roseosporus NRRL 11379] gi|291446732|ref|ZP_06586122.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291349679|gb|EFE76583.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length = 668 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 74/223 (33%), Gaps = 6/223 (2%) Query: 35 FLKCGINTGLVGFAEVKANG-DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 L+ G+ G ++ ++G+D+D A++ ++ ++ + + R AL+ Sbjct: 414 TLEIGVKDDQPGLSKFDRKTRTYRGYDIDLAYAIAESMGYGKGEVAFTTVATDYRSTALK 473 Query: 94 SKQIDILSRNTDWTLLREI----SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS-I 148 +KQ+D++ + T R+ + F Y +GF++ +K +++ S + Sbjct: 474 TKQVDLVIASYSITDDRKTAGPDGYSVDFAGPYYEASRGFLVREKSAKYTINDSSDLRDL 533 Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208 V+ T E T ++ + D Y + Sbjct: 534 GVEVCTARESTYEKALPKQGFTMAKSQPNTYQDCLDKLLDPKSDVYAVASDDIILAGYVE 593 Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 P + L +I A+ V ++ Sbjct: 594 ANPGKVRRLENIQGAEGYGVAMRPKSPVLKGEVCSALRTILAG 636 >gi|206562322|ref|YP_002233085.1| cystine-binding periplasmic protein precursor [Burkholderia cenocepacia J2315] gi|198038362|emb|CAR54319.1| cystine-binding periplasmic protein precursor [Burkholderia cenocepacia J2315] Length = 279 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 35/247 (14%), Positives = 78/247 (31%), Gaps = 11/247 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + + + + + A +L + G L+ ++ + G+DV+ Sbjct: 11 RGLATLGIAGALALSSLDAGAADLLAAARGSGTLRVANTQSSPPWSLLDERNQPAGYDVE 70 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 R + I ++ ++ K L++ + D++ + T R S + F Sbjct: 71 VAREVGKRIGVK--QVVFVADAYKNFVEGLKAGKYDLVMNDLTPTAER--SKQVDFAKPY 126 Query: 123 YFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 + + I + L G + V G++ E + +AH ++ Sbjct: 127 GVEDFRIFVRTDNTHIHGQADLKGKRVGVTTGSSNET----WARAHLKDADIRAYDNGGL 182 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241 + + R DA +K N + + + APA+ +G V Sbjct: 183 VFNDLGSGRLDAVIISHFG--GMKYANVNHLPVKEVGEPLIYQLSAPALAKGQPALLAAV 240 Query: 242 SWTHYAM 248 M Sbjct: 241 DKAIDDM 247 >gi|187780208|ref|ZP_02996681.1| hypothetical protein CLOSPO_03804 [Clostridium sporogenes ATCC 15579] gi|187773833|gb|EDU37635.1| hypothetical protein CLOSPO_03804 [Clostridium sporogenes ATCC 15579] Length = 262 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 33/245 (13%), Positives = 74/245 (30%), Gaps = 10/245 (4%) Query: 7 VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCR 65 +S++ + + T+ + + + + +K G + F + + +GF++D Sbjct: 1 MSLVVTLGVGLTACAQKNKEINE--NKNTIKIGTSGQYYPFTFIDKDSNKVQGFEIDIWE 58 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 + P + + L + +ID ++ T + F + Sbjct: 59 EIGKRTGYKPE---FKVADWTGIMGMLDTGKIDTVANEITVTD--KKKEKYYFSKPYVYS 113 Query: 126 GQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAH-NMKYHPIVFERVEEID 183 G K I S+ L G ++ Q GT ++ DY + + + Sbjct: 114 GVQLATKKGNNNIKSLKDLEGKTVATQVGTNYSKSIEDYNNKNKGEDIKTKQYNSFSGMF 173 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 R DA D A + + P ++ + E ++ Sbjct: 174 QDVDLGRVDALIEDKLACLVNIKKSGLNLQLAGEPIEEMENAYPFVKKDENREKIEKINK 233 Query: 244 THYAM 248 M Sbjct: 234 ALDDM 238 >gi|83942405|ref|ZP_00954866.1| cystine-binding protein [Sulfitobacter sp. EE-36] gi|83953625|ref|ZP_00962346.1| cystine-binding protein [Sulfitobacter sp. NAS-14.1] gi|83841570|gb|EAP80739.1| cystine-binding protein [Sulfitobacter sp. NAS-14.1] gi|83846498|gb|EAP84374.1| cystine-binding protein [Sulfitobacter sp. EE-36] Length = 250 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 84/220 (38%), Gaps = 24/220 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L I L + A L G++ G F VK + + +GF+ Sbjct: 1 MIKH---ATLTAIALATGVSAAQAET---------LNVGMSGGYFPFTFVKLD-ELQGFE 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF A++ ++ ++ ++ AL+S +ID ++ T RE AF Sbjct: 48 VDFINAVAKETG---DEVNFVTMSFSGLIGALESGRIDTIANQITITPEREA--KFAFSQ 102 Query: 121 ITYFDGQGFIMH--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 FDG ++ + I SV LSG ++ V G+ E L + + + +E Sbjct: 103 PYVFDGAQVVVKEGNEDTIGSVEDLSGKTVAVNLGSNFEELLNEL--PNAGEIDIRTYES 160 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218 D A R DA+ D + L + P P Sbjct: 161 NIAQDTAL--GRVDAFVMDRVSSAQLIAESPLPLALAGKP 198 >gi|107025353|ref|YP_622864.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116693464|ref|YP_838997.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|170737259|ref|YP_001778519.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|105894727|gb|ABF77891.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116651464|gb|ABK12104.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] gi|169819447|gb|ACA94029.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 257 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 89/252 (35%), Gaps = 18/252 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ L + + + S A ++ GI+ +G KGFD Sbjct: 1 MKR--FLVPLVFLCIGLAATSAYA------LDAHVVRLGIDPTYPPMDAKAPDGSLKGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + Q++ L ALQ+++ID + + T RE + F Sbjct: 53 VDLGNEICRRA---QLRCQWVELEFSGMIPALQARKIDAILSSMAITAKREK--QILFSS 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + G+ + + L+G + VQ+GT E ++ + + ++ Sbjct: 108 KLFRFKSRLVARPGSGLDGTAASLAGKRVGVQSGTQFESWALAHWAPAGVG--VVPYKSQ 165 Query: 180 EEIDAAYRAHRCDA--YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 +++ A R DA + L+ + V P + + + Q DT Sbjct: 166 DDVFADLVNGRLDAALLGTVEADYGFLRQPRGKGFAFVGAPLDMGDRGVGIGMRQSDTAL 225 Query: 238 YNIVSWTHYAMV 249 + +M+ Sbjct: 226 KASIDGAIASML 237 >gi|310640366|ref|YP_003945124.1| glutamine transport system permease protein [Paenibacillus polymyxa SC2] gi|309245316|gb|ADO54883.1| Probable glutamine transport system permease protein [Paenibacillus polymyxa SC2] Length = 482 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 84/279 (30%), Gaps = 13/279 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + + + N ++ + + G +T F NG + G D Sbjct: 1 MQKPRKLIALMICLFSVVALAGNFGVVAHAENKTKYDIGTDTTFAPFEFEDVNGKFVGID 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + PL AL++ Q+D + T R+ F Sbjct: 61 MDLLAAIAKD---QNFEYTIKPLGFNAAVQALETNQVDGVIAGMSITDERK--QKFDFSE 115 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + K I L G + V+ GT + + F+ Sbjct: 116 PYFDSGVVMAVRKDNDTIKRYEDLKGQRVAVKTGTEGYTFAESI--KAKYGFTTVPFDDS 173 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE--W 237 ++ + A D L N+ ++ D A+ QG Sbjct: 174 SQMYDEVKTGNSVACFDDYPVLAYGVTQNNG---LKLVTDKEKGGSYGFAVNQGKNAELL 230 Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276 + + E I K + + K + R+ Sbjct: 231 EKFNAGLVNLRNSGEYDKIMSKYLGESGKGVAPVERSRW 269 >gi|171316636|ref|ZP_02905850.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia ambifaria MEX-5] gi|171098183|gb|EDT42992.1| cationic amino acid ABC transporter, periplasmic binding protein [Burkholderia ambifaria MEX-5] Length = 260 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 77/224 (34%), Gaps = 13/224 (5%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K ++ G++ F A+G GFDVD + + +K ++ + Sbjct: 23 KDWTTVRFGVDASYPPFESKGADGKVVGFDVDLGNEICRRM---NAKCVWIENDFDGMIP 79 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149 AL++++ D + + T R+ + F + + K G+ + L G SI Sbjct: 80 ALKARKFDGVLSSMSMTPARQEQIA--FSEKLFNTPTRLVAKKGSGLMPTAESLKGKSIG 137 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 V+ GT E Y+ A + ++ +++ A A R D D L Sbjct: 138 VEQGTIQETYAKTYWAAKG--VKVVPYQNQDQVYADLIAGRLDGALQDAVQAEIGFLKTP 195 Query: 210 RPSEHVILPDIISK-----SPLAPAIIQGDTEWYNIVSWTHYAM 248 R + I + + + DT+ + M Sbjct: 196 RGANFDFAGKDIDDPKTLGNGAGIGLRKEDTDLKAKIDSAITGM 239 >gi|328464936|gb|EGF36224.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus helveticus MTCC 5463] Length = 473 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 76/230 (33%), Gaps = 16/230 (6%) Query: 22 TNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + S++ IK+ L G + V N + G D++ + ++ + +K+ Sbjct: 14 ASDSVMKKIKQSKELVVGTSADYPPLEFTTSVNGNTKYVGVDIELAKDIAKDL---HAKL 70 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF---DGQGFIMHKKK 135 ++ +AL++ ++D++ R+ + F I Y + + Sbjct: 71 VIKNMSFDSLLVALETGKVDMVISAMTPNPERKK--SVDFSQIYYKSSGEYFLINKRDQT 128 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 + +G ++ Q G+ + K K ++ + A ++ + Sbjct: 129 KYKKIKDFAGQTVGAQTGSIQYQLIQSQMKKSKAKG----LGKINNLVLALKSGKMSGVV 184 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + ND V ++ A AI +G V+ T Sbjct: 185 MEE-LTAKAYAKNDNSLMAVRSDLREEQAGSAVAIAKGQPGLVKAVNKTI 233 >gi|261368434|ref|ZP_05981317.1| amino acid ABC transporter, amino acid-binding protein [Subdoligranulum variabile DSM 15176] gi|282569525|gb|EFB75060.1| amino acid ABC transporter, amino acid-binding protein [Subdoligranulum variabile DSM 15176] Length = 286 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 80/211 (37%), Gaps = 9/211 (4%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 S L IK +G + G NG++ GFD + A+ + +P ++ +N Sbjct: 54 SDLQYIKDKGKMTIGYTV-YAPMNYTDDNGEFVGFDTELATAVCEQLGVEPE---FVEIN 109 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144 + + L +K ID + T +I + + Q +M G +S + L Sbjct: 110 WDTKVVELDAKSIDCIWNGMTLTD--DIMANTSCTEAYAKNAQVVVMKTGSGYTSTADLV 167 Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204 G ++ +AG+ E T+ + + + + + A DA D++ A+ Sbjct: 168 GKTVVAEAGSAGETTIQE--DENLSQADYVSKGVQTDCLMEVAAGTADAAVLDLTLASAM 225 Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ I+ ++ ++ A +G Sbjct: 226 IGEGTDYADLEIVDELNAEE-YGVAFRKGSD 255 >gi|325063882|gb|ADY67572.1| amino acid ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 278 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 80/230 (34%), Gaps = 11/230 (4%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 F A + + K +G + GI + V ++G G D D +A + + Sbjct: 24 FIAPVDAFAGTVDEAKAKGKVVIGIQGDNSPWGFVNSSGVQDGLDADIGKAFAEYLGVK- 82 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135 ++++PL R AL + ++D+L T R ++ + + K K Sbjct: 83 --VEFVPLAVANRIPALLTGKVDLLFATMGMTAERAKTIQ--YSKPYAGNVLSVYGPKDK 138 Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195 I + L+G S+ V + + + K + F+ A + + + Sbjct: 139 KIGNYDDLTGVSVGVPKSSAMDTAITAGA---GSKAKILRFDDDAANIQALISGQVEVVG 195 Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 G+ Y +L ++ D+ + G+ +W V+ Sbjct: 196 GN--QFYGDRLNQAANGKYEPKFDLTTL-YNGAGTRPGEKDWNETVNAFL 242 >gi|323490321|ref|ZP_08095536.1| extracellular solute-binding protein [Planococcus donghaensis MPA1U2] gi|323395991|gb|EGA88822.1| extracellular solute-binding protein [Planococcus donghaensis MPA1U2] Length = 279 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 83/267 (31%), Gaps = 33/267 (12%) Query: 1 MYKDF-FVSILCLIILFFTSFS--------------TNASILGDIKKRGFLKCGINTGLV 45 M K F+S++ + + +S L +++ G + Sbjct: 1 MKKKLSFLSVIFSAGMLLAACGGDDSSSSEEGSNSDGGSSDLNLVEE-GKFTTASSGLYK 59 Query: 46 GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105 F GD GFD+D ALS + +P+ + + L + + D + + Sbjct: 60 PFNFT-EGGDLTGFDIDISNALSEEMGLEPNPVT---TPWETILQGLTTNRFDAIIGSMA 115 Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYF 164 T RE ++F Y+ G I+S + L GA I V +T + Sbjct: 116 ITEEREE--QVSFSDPYYYSGGVIFTKAGNTEITSEADLEGAKIGVVGQSTYDT------ 167 Query: 165 KAHNMKYHPIVFERVEEIDAAY-RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 A + R DA + E ++ D + Sbjct: 168 AAQKYTDDIQYYNSDVVALQDLAIEGRLDAVITADVVG---FEAQNAGLEIEMVGDPLWI 224 Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVT 250 A AI + D E V+ A+V Sbjct: 225 EQAAVAINKEDEELLAAVNEALAAIVE 251 >gi|237798795|ref|ZP_04587256.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021648|gb|EGI01705.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 260 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 83/222 (37%), Gaps = 11/222 (4%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ L+ G++ F A+G GFD+D A+ + +++ + Sbjct: 23 KEYKELRFGVDPSYAPFESKAADGSLVGFDIDLGNAICKEL---KVTCKWVESDFDGMIP 79 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149 L++++ D + + T RE + F + + K G++ + L G ++ Sbjct: 80 GLKARKFDGVISSMTVTPAREKV--IDFSNELFSGPTSLVFKKGAGLTADPASLKGKTVG 137 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + GT E + + +++ A + R DA D+ L + Sbjct: 138 YEQGTIQEAYAKAVLDKAGVSTK--AYANQDQVYADLTSGRLDASIQDMLQAELGFLKSP 195 Query: 210 RPSEHVILPDIISK---SPLAPAIIQGDTEWYNIVSWTHYAM 248 +++ + + ++ + A I +G+ E ++ AM Sbjct: 196 AGADYEVSKPVDNELLPAKTAIGIAKGNKELKALLDKGIKAM 237 >gi|294785270|ref|ZP_06750558.1| amino acid-binding protein [Fusobacterium sp. 3_1_27] gi|294486984|gb|EFG34346.1| amino acid-binding protein [Fusobacterium sp. 3_1_27] Length = 250 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 82/256 (32%), Gaps = 28/256 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L L L F L G N + + N GFD Sbjct: 1 MKKIITILMLILSTLSFA--------------TKKLYVGTNAEFKPYEYL-ENNKMVGFD 45 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ L + + I++ ++ ALQ K+ID + T RE ++ + Sbjct: 46 IELMELLGKELGYE---IKWQDMSFDGLLPALQMKKIDAVIAGMSSTPEREKAVSFSIPY 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I + G I++ K L G ++ VQ G+ E D P ++ Sbjct: 103 IFFEGGHDVIVNDKSSFKKKEDLKGKTVGVQLGSIQEEFAKD------NGSIPKLYNNFT 156 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA-PAIIQGDTEWYN 239 E + + DA + T + I K P A A + D + Sbjct: 157 EALLDLQNQKIDAVIIAEVSGKEYLKTMKG---IKKIDTIKDKLPNASIAFRKADAKLAK 213 Query: 240 IVSWTHYAMVTAEELG 255 S T + + E Sbjct: 214 EFSNTILKIKNSPEYA 229 >gi|209559563|ref|YP_002286035.1| Glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pyogenes NZ131] gi|209540764|gb|ACI61340.1| Glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pyogenes NZ131] Length = 724 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 96/293 (32%), Gaps = 38/293 (12%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V +L ++ +F T +A + + +T F ++ +KG D Sbjct: 1 MTHKIKVLLLAIMSIFLTCNIASAETIAIV---------SDTAYAPFEFKDSDQIYKGID 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ D + + +A A+QS Q L T T R+ F Sbjct: 52 VDIINEVAKRQSWD-FSMSFPGFDAAVN--AVQSGQASALMAGTTITNARKKV--FHFSE 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y K I S L G ++ V+ GT + L +Y Y F+ + Sbjct: 107 PYYDTKIVIATRKANAIKKYSDLKGKTVGVKNGTAAQAFLNNY--KKKYDYTVKTFDTGD 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP--AIIQGDTEWY 238 + + A A D + + N + + P+ ++ + + Sbjct: 165 LMYNSLSAGSIAAVMDDEAVIQYAISQNQD------IAINMKGEPIGSFGFAVKKGSGYD 218 Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ-RFLGIDKSSNIGEALG 290 +V+ + A + + D T + + LG D + +A G Sbjct: 219 YLVNDFNTA-------------LKAMKADGTYQAIMTKGLGTDDKATTSQATG 258 Score = 96.3 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 72/220 (32%), Gaps = 11/220 (5%) Query: 37 KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96 K G ++ F G + G D++ +A++ KI+ A+QS Q Sbjct: 272 KIGSDSAFAPFEFQNGKGKYVGIDIELIKAIAKQ---QGFKIEIANPGFDAALNAVQSSQ 328 Query: 97 IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156 D + T R+ F Y + K I + L ++ + GT++ Sbjct: 329 ADGVIAGATITDARKAI--FDFSDPYYTSNIILAVKAGKNIKNYEDLDRKTVGAKNGTSS 386 Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 L + + + F+ + + + DA D LK + Sbjct: 387 YSWLKENAPKYGY--NVKAFDDGSSMYDSLNSGSVDAIMDDE---AVLKYAISQGRRFET 441 Query: 217 LPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255 + IS + A+ + + E + + A+ + + Sbjct: 442 PLEGISTGEVGFAVKKGTNPELIEMFNNGLAALKKSGQYD 481 >gi|168334974|ref|ZP_02693092.1| Amino acid-binding protein [Epulopiscium sp. 'N.t. morphotype B'] Length = 227 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 71/210 (33%), Gaps = 13/210 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 LK G N F ++ + GFDVD ++ + +++ + + A+ + Sbjct: 10 LKMGTNAAFPPFEYIEGT-EIVGFDVDLANLIAEELG---MELEIMDMEFNTLTGAVANG 65 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTT 155 IDI T R + F + Q I+ I L+ +I VQ GTT Sbjct: 66 IIDIAVAGMTNTPER--RDSVNFSEGYFTSKQMIIVPDDSDIKVTDDLTDQTIGVQLGTT 123 Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215 + + Y + + F++ A DA D D Sbjct: 124 GDQFASMYIE----GADIVRFDKGALAIADLLNGTIDAVIIDAEPAKNFVAAQD---SLQ 176 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 IL + + A AI + +TE ++ Sbjct: 177 ILENPFVEEEYAIAIAKENTELTEQINDAL 206 >gi|238795094|ref|ZP_04638686.1| Histidine-binding periplasmic protein of high-affinity histidine transport system [Yersinia intermedia ATCC 29909] gi|238725589|gb|EEQ17151.1| Histidine-binding periplasmic protein of high-affinity histidine transport system [Yersinia intermedia ATCC 29909] Length = 260 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 75/215 (34%), Gaps = 13/215 (6%) Query: 36 LKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSK 95 +K G + F A+G+ GFD+D + L I +K ++ + +L++K Sbjct: 28 VKIGTDPTYAPFESKNASGELVGFDIDIAKELCKRI---DTKCTFVESDFDALIPSLKAK 84 Query: 96 QIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI-SSVSQLSGASICVQAGT 154 +ID + + T R+ + F Y I K I ++ L G + V G+ Sbjct: 85 KIDAIISSLSITEKRQKEIA--FTDKLYAANARLIATKGSKIEPTLVALKGKRVGVLQGS 142 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T E ++ + + ++ + I A + R DA D A L + + Sbjct: 143 TQEAFANAEWQPKGID--VVAYQNQDLIYADLASGRIDAAFQDEVAGSEGFLKQEAGKGY 200 Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWT 244 + + + D E + Sbjct: 201 AFAGPSVKNDQFFGVGTGMGLRKDDAELKAALDKA 235 >gi|153811656|ref|ZP_01964324.1| hypothetical protein RUMOBE_02048 [Ruminococcus obeum ATCC 29174] gi|149832397|gb|EDM87482.1| hypothetical protein RUMOBE_02048 [Ruminococcus obeum ATCC 29174] Length = 313 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 77/256 (30%), Gaps = 9/256 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ + L+ T A+ D +T F +G++ G D Sbjct: 31 MKKMCYLLTMGLLAGSLT-VPVFAASDADSASDKKWVIATDTVFKPFEYTDDDGNFVGID 89 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ + L A Q+ Q D + T R G F Sbjct: 90 VDVLDAIAKDQGFEYE---LKSLGWDASIAACQAGQADGMIAGASITDER-KDSGWLFSD 145 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y Q + K I L G ++ V+ GT + + +E Sbjct: 146 GYYNATQSMTVQKDSDIKGFDDLKGKTVGVKTGTQGATYAESLKDEYGF--NITYYEDSP 203 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE-WYN 239 + A + A D + + + + ++ SP AI D + + Sbjct: 204 TMYQAVLGGQVVACFEDTPIMASSI-KDGDLALQILEDTANEGSPYGFAIFDADNQELLD 262 Query: 240 IVSWTHYAMVTAEELG 255 + + + + E Sbjct: 263 MFNAGLKDIKESGEYN 278 >gi|254249775|ref|ZP_04943095.1| amino acid ABC transporter, amino acid-binding protein [Burkholderia cenocepacia PC184] gi|124876276|gb|EAY66266.1| amino acid ABC transporter, amino acid-binding protein [Burkholderia cenocepacia PC184] Length = 257 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 89/252 (35%), Gaps = 18/252 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + F+ L + + + S A ++ GI+ +G KGFD Sbjct: 1 MKR--FLVPLVFLCIGLAATSAYA------LDAHVVRLGIDPTYPPMDAKAPDGSLKGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + + Q++ L ALQ+++ID + + T RE + F Sbjct: 53 VDLGNEICRRA---QLRCQWVELEFSGMIPALQARKIDAILSSMAITAKREK--QILFSS 107 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + G+ + + L+G + VQ+GT E ++ + + ++ Sbjct: 108 KLFRFKSRLVARPGSGLDGTAASLAGKRVGVQSGTQFESWALAHWAPAGVG--VVPYKSQ 165 Query: 180 EEIDAAYRAHRCDA--YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237 +++ A R DA + L+ + V P + + + Q DT Sbjct: 166 DDVFADLVNGRLDAALLGTVEADYGFLRQPRGKGFAFVGAPLDMGDRGVGIGMRQSDTAL 225 Query: 238 YNIVSWTHYAMV 249 + +M+ Sbjct: 226 KASIDGAIASML 237 >gi|189024131|ref|YP_001934899.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella abortus S19] gi|225627435|ref|ZP_03785472.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella ceti str. Cudo] gi|237815386|ref|ZP_04594384.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella abortus str. 2308 A] gi|254689192|ref|ZP_05152446.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella abortus bv. 6 str. 870] gi|254697328|ref|ZP_05159156.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella abortus bv. 2 str. 86/8/59] gi|254710048|ref|ZP_05171859.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella pinnipedialis B2/94] gi|254730226|ref|ZP_05188804.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella abortus bv. 4 str. 292] gi|256031543|ref|ZP_05445157.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella pinnipedialis M292/94/1] gi|256159678|ref|ZP_05457431.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella ceti M490/95/1] gi|256254946|ref|ZP_05460482.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella ceti B1/94] gi|256257442|ref|ZP_05462978.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella abortus bv. 9 str. C68] gi|260168675|ref|ZP_05755486.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella sp. F5/99] gi|260545364|ref|ZP_05821105.1| arginine/ornithine-binding periplasmic protein [Brucella abortus NCTC 8038] gi|260757918|ref|ZP_05870266.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 4 str. 292] gi|260883720|ref|ZP_05895334.1| extracellular solute-binding protein [Brucella abortus bv. 9 str. C68] gi|261222129|ref|ZP_05936410.1| extracellular solute-binding protein [Brucella ceti B1/94] gi|261317595|ref|ZP_05956792.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis B2/94] gi|261758149|ref|ZP_06001858.1| arginine/ornithine-binding periplasmic protein [Brucella sp. F5/99] gi|265988629|ref|ZP_06101186.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis M292/94/1] gi|265998094|ref|ZP_06110651.1| extracellular solute-binding protein [Brucella ceti M490/95/1] gi|294852304|ref|ZP_06792977.1| polar amino acid transport system substrate-binding protein [Brucella sp. NVSL 07-0026] gi|297248291|ref|ZP_06932009.1| polar amino acid transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] gi|189019703|gb|ACD72425.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella abortus S19] gi|225617440|gb|EEH14485.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella ceti str. Cudo] gi|237790223|gb|EEP64433.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella abortus str. 2308 A] gi|260096771|gb|EEW80646.1| arginine/ornithine-binding periplasmic protein [Brucella abortus NCTC 8038] gi|260668236|gb|EEX55176.1| extracellular solute-binding protein family 3 [Brucella abortus bv. 4 str. 292] gi|260873248|gb|EEX80317.1| extracellular solute-binding protein [Brucella abortus bv. 9 str. C68] gi|260920713|gb|EEX87366.1| extracellular solute-binding protein [Brucella ceti B1/94] gi|261296818|gb|EEY00315.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis B2/94] gi|261738133|gb|EEY26129.1| arginine/ornithine-binding periplasmic protein [Brucella sp. F5/99] gi|262552562|gb|EEZ08552.1| extracellular solute-binding protein [Brucella ceti M490/95/1] gi|264660826|gb|EEZ31087.1| extracellular solute-binding protein family 3 [Brucella pinnipedialis M292/94/1] gi|294820893|gb|EFG37892.1| polar amino acid transport system substrate-binding protein [Brucella sp. NVSL 07-0026] gi|297175460|gb|EFH34807.1| polar amino acid transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] Length = 177 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 57/151 (37%), Gaps = 7/151 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +++ + + + A+ + + ++ L G F +K +G GFD Sbjct: 1 MRVLKRIAMATSVAALAITVGSMAAGVANAEEPLKLTIGTEGAYPPFNFIKPDGTLSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RAL + +K +++ + ALQS + D + T R+ + F Sbjct: 61 VDIARALCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFIASMSITDERKK--QVDFTN 115 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASIC 149 Y G K I + L+G +I Sbjct: 116 KYYNTPPGIAAPKDTDIKGVTKEDLAGKTIG 146 >gi|148652956|ref|YP_001280049.1| extracellular solute-binding protein [Psychrobacter sp. PRwf-1] gi|148572040|gb|ABQ94099.1| extracellular solute-binding protein, family 3 [Psychrobacter sp. PRwf-1] Length = 281 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 72/232 (31%), Gaps = 12/232 (5%) Query: 16 FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75 S T++ +L I G + G + G+DV+ RA++ + Sbjct: 36 ATQSTGTDSDLLSRINSGGTINVGTEGTYPPYTYHDEQNKLTGYDVEVTRAVADKLGVK- 94 Query: 76 SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK-K 134 +++ L +K+ D+++ T E + G + K Sbjct: 95 --VEFKETQWDAMLAGLDAKRFDMVANQVSLT-TPERQAKYDKAEAYSWSGAVVLAPKSD 151 Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 +S L G Q+ ++ LA ++A + + + + + R D Sbjct: 152 SRFNSWESLKGLKSA-QSLSSNYGELAKKYEA-----EVVPVDGMAQAVELVKQGRADFT 205 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAIIQGDTEWYNIVSWTH 245 D A+ S + L + +++GD ++ Sbjct: 206 LNDNLAVLDYLKKFPDSSLEIKLKAPAEEMTGSGLVMLKGDDAALAKINEAM 257 >gi|91778291|ref|YP_553499.1| ABC amino acid transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|91690951|gb|ABE34149.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 275 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 30/230 (13%), Positives = 68/230 (29%), Gaps = 10/230 (4%) Query: 9 ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68 ++ L + ++ + L +KK G L G F + NG GF+ D + Sbjct: 11 LVMLALCAASATAHAEDQLAKVKKAGELVVGTEMQFAPFDFL-ENGQQAGFNKDLFAEVG 69 Query: 69 SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128 + ++++ L L++ + D++ T R + Sbjct: 70 KEMGVK---VRFIDLPWPSVLPGLEAGKFDMVGGPLTVTKAR--MERYTYTLPIADATDA 124 Query: 129 FIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 + + S ++G ++ G+ L Y + + A Sbjct: 125 LLKRANDSSLRQSSDIAGKTVGAGKGSAQLDQLKAYVATLPKPPEIREYVDNNQAYADLA 184 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL-APAIIQGDTE 236 A R A ++ + + RP ++ A + + Sbjct: 185 AGRIVAVANSMTNIA--YVAKQRPETFAVVQPPFGAKVYFAYCLRKDADS 232 >gi|312139902|ref|YP_004007238.1| abc transporter substrate binding lipoprotein [Rhodococcus equi 103S] gi|311889241|emb|CBH48555.1| putative ABC transporter substrate binding lipoprotein [Rhodococcus equi 103S] Length = 298 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 77/254 (30%), Gaps = 21/254 (8%) Query: 21 STNASILG-DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + A L D+ G L+ G N +G GFDVD A+ + + + Sbjct: 45 AAIADQLPPDVAASGELRIGTNPPYAPNEFKDESGAIVGFDVDLMEAVGAVLG---LTLD 101 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + + A+Q+ +D+ + TL RE + F Y G + I Sbjct: 102 LKQTDFDKIIPAVQAGTLDLGMSSFTDTLEREK--SVDFV-TYYSAGVQWAQRAGDDI-D 157 Query: 140 VSQLSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 G + VQ T + A A I ++ +++ A R DA Sbjct: 158 PDDACGLRVGVQTTTIEDIDEVPAKSAACVAAGKPPIRKIKYDSQDDVANALILGRVDAL 217 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD---TEWYNIVSWTHYA---M 248 + D V + SP + +G V + Sbjct: 218 SADSPVTA--YAIKRSDGRMVPAGGVYDASPYGWVVAKGSPLAPVLQQAVQYLIDGGQYQ 275 Query: 249 VTAEELGITQKNIN 262 AE G+ I+ Sbjct: 276 AIAEAWGVEAGMID 289 >gi|258509857|ref|YP_003172608.1| ABC transporter glutamine-binding periplasmic protein [Lactobacillus rhamnosus GG] gi|257149784|emb|CAR88757.1| ABC transporter, glutamine-binding periplasmic protein [Lactobacillus rhamnosus GG] Length = 484 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 98/309 (31%), Gaps = 21/309 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + + +S+L + L + + +K G + F + + G D Sbjct: 1 MKRKWLLSLLIALPLMLGALI-PGKTVAAAQK--TYTIGTDVTFAPFEFANQDNKYVGID 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ + K++ PL AL++KQID + T R+ Sbjct: 58 LDLIKAIAKE---EGFKVEIKPLGFNAAVQALEAKQIDGVIAGMSITPERK--QKFLMSD 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G + KK I S+ L G + ++ GT + + + F+ Sbjct: 113 PYYKSGVVMAVAKKSTIKSLKDLRGKRVAIKTGTDSADYANSI--KQKYGFTTVTFDDSN 170 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A D + + + ++ + A + + + Sbjct: 171 NMYQDVITGNSAACFEDQPVM---QYGINNGMALKLVGKPAREGSYGFAASKNNQALISK 227 Query: 241 VSWTH--------YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292 + Y + LG + + + + F+G+ K++ GL Sbjct: 228 FNTGLKKLRANGQYDKIIEHYLGNGSAESQKTAAGNSQTTDRSFIGLLKANWSTLMGGLR 287 Query: 293 KDWTYRIIR 301 + I+ Sbjct: 288 ETMVLTIVA 296 >gi|227551702|ref|ZP_03981751.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] gi|227179143|gb|EEI60115.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] Length = 487 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 82/243 (33%), Gaps = 13/243 (5%) Query: 16 FFTSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 T+ S+ + + I+ K+ ++ F ANG+++G DV +++ Sbjct: 18 TTTAESSTSETMQKIEPKKDVYVIASDSAFAPFEFQNANGEYEGIDVQLMESIAK---LQ 74 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134 I+ AL+S Q D + T R+ F + G + K Sbjct: 75 GFNIRMDYRGFSAALQALESGQADGMIAGMTVTDERKK--SYDFSDSYFDSGIQLAVKKG 132 Query: 135 KG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I S L G ++ + GT + L+D+ + F+ +++ + DA Sbjct: 133 DTSIKSYEDLKGKTVGAKVGTESAEFLSDHESEYGYS--IKYFDAADQLYDGLKVGAIDA 190 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAE 252 D + + E + S A A+ + + E N+ + + Sbjct: 191 MMDDYPVIG---YAIKQGQELETPIEKESGGKYAFAVKKGQNPELLNMFNEGLKELKRTG 247 Query: 253 ELG 255 E Sbjct: 248 EYD 250 >gi|260461731|ref|ZP_05809977.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|319785283|ref|YP_004144759.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|259032372|gb|EEW33637.1| extracellular solute-binding protein family 3 [Mesorhizobium opportunistum WSM2075] gi|317171171|gb|ADV14709.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 260 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 84/253 (33%), Gaps = 20/253 (7%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDV 61 + I ++ A +K GI F+ + A+G W G+++ Sbjct: 2 RILSKLTAAAAIFCASTLMAQAE---------QVKVGIAAEPYPPFSSLDASGKWVGWEI 52 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 + A+ + D P+ +L SK+ID++ + T R+ + + F Sbjct: 53 EIIDAICAEAKLD---CVITPVAWDGIIPSLTSKKIDVIMSSMSITEKRKKT--IDFSDK 107 Query: 122 TYFDG-QGFIMHKKKGI-SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y D K I + L G + +Q T E+ + +FK + ++ Sbjct: 108 YYSDNGYTIAGPKGVTIDPTPEGLKGRILGIQVSTNAEVYASKHFK--DSLAEMKTYQTQ 165 Query: 180 EEIDAAYRAHRCDAY-TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 +E + A R DA ++ +K + + AP G + Sbjct: 166 DEANQDLVAGRIDAILASPLTIDQFMKTDQGKACCEIKGKVANDPEIFAPGAGAGLRKGD 225 Query: 239 NIVSWTHYAMVTA 251 ++ A + Sbjct: 226 TMLKEKINAAIKG 238 >gi|319940652|ref|ZP_08014995.1| hypothetical protein HMPREF9464_00214 [Sutterella wadsworthensis 3_1_45B] gi|319806018|gb|EFW02776.1| hypothetical protein HMPREF9464_00214 [Sutterella wadsworthensis 3_1_45B] Length = 267 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 79/255 (30%), Gaps = 24/255 (9%) Query: 2 YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFD 60 +K + + S +A+ L+ N F +N G +GF+ Sbjct: 12 FKSLSLLAAAGLCTLSLCGSVSAA---------ELRVATNPTFPPFEFQDSNTGTIQGFE 62 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + ++ + A+ S +D+ + T R + F Sbjct: 63 MDLVAEIAKKLG---DTVKIDKITFDGIIPAILSGSVDLGASGFSVTPER--GKKVLFSL 117 Query: 121 ITYFDGQGFIMHKKKG--ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y G ++ K I+ L G I VQ GTT+ F F+ Sbjct: 118 PFYKSGLTILVPKANKAGITDFESLKGKRISVQLGTTSMQ-----FAKKIPDAEITTFDH 172 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEW 237 V + A DA D + TN L I + A + + +T Sbjct: 173 VGDAVLNMMAGNADAVINDKPVTDYMLHTNKSIAEGTTHLAPIATADYFAMVVAKNNTNL 232 Query: 238 YNIVSWTHYAMVTAE 252 ++ + AE Sbjct: 233 QQDINAALK-QLKAE 246 >gi|289625252|ref|ZP_06458206.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647249|ref|ZP_06478592.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298488755|ref|ZP_07006783.1| lysine/arginine/ornithine-binding periplasmic protein precursor [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156673|gb|EFH97765.1| lysine/arginine/ornithine-binding periplasmic protein precursor [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330867263|gb|EGH01972.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330984858|gb|EGH82961.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 260 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 80/222 (36%), Gaps = 11/222 (4%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ L+ G++ F A+G GFD+D A+ + +++ + Sbjct: 23 KEYKELRFGVDPSYAPFESKAADGSLVGFDIDLGNAICKEL---KVTCKWVESDFDGMIP 79 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149 L++++ D + + T RE + F + + K G + + L G ++ Sbjct: 80 GLKARKFDGVISSMTVTPAREKV--IDFSNELFSGPTSLVFKKGAGFTADPASLKGKTVG 137 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + GT E + + +++ A + R DA D+ L + Sbjct: 138 YEQGTIQEAYAKAVLDKAGVSTK--AYANQDQVYADLTSGRLDASIQDMLQAELGFLKSP 195 Query: 210 RPSEH---VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 +++ + + + A I +G+ E ++ AM Sbjct: 196 AGADYEVSKPIDSELLPAKTAIGIAKGNKELKALLDKGIKAM 237 >gi|257467872|ref|ZP_05631968.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185] gi|317062161|ref|ZP_07926646.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185] gi|313687837|gb|EFS24672.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185] Length = 250 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 84/254 (33%), Gaps = 26/254 (10%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L L L F + L G N + + +G GFD Sbjct: 1 MKKLVLIFTLLLSTLSFAA--------------KKLYVGTNAEFKPYEYL-EDGKMVGFD 45 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 + L + + I+++ ++ ALQ K+ID + T R+ ++ + Sbjct: 46 IGVMDELGKKLGYE---IEWVNMSFDGLLPALQMKKIDAVIAGMSQTPERQKAVSFSIPY 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 I + I+++ + L G + VQ G+ E A N P ++ Sbjct: 103 IFFTSEHYVIVNENSTFKTKEDLKGKTAGVQMGSMQEQF------AINNGSVPKLYNTFT 156 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + D ++ T DR + + D + +A + D E Sbjct: 157 NALMDLQNGKVDCVIIADNSGKEYLNTMDRIKKIDSIIDPKPGASIA--FRKSDKELAEK 214 Query: 241 VSWTHYAMVTAEEL 254 S + T +E Sbjct: 215 FSDAIVELKTTKEY 228 >gi|24379641|ref|NP_721596.1| putative ABC transporter, amino acid binding protein [Streptococcus mutans UA159] gi|24377594|gb|AAN58902.1|AE014958_6 putative ABC transporter, amino acid binding protein [Streptococcus mutans UA159] Length = 283 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 68/235 (28%), Gaps = 13/235 (5%) Query: 1 MYKDFFVSI-LCLIILFFTSFSTNASI----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55 M K FF++ L L +F + S + I KRG LK L + + Sbjct: 1 MKKHFFMTFSLLLAAVFLVACSNLSDSGQRNWDKINKRGMLKIATAGTLYPQSYHDDHNK 60 Query: 56 WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115 G+DV+ + + + K+Q+ + A++S QID+ + + + Sbjct: 61 LTGYDVEILKEIGKRLG---LKVQFTEMGVDGMLTAIKSGQIDVANYSLEDGNKNISKFL 117 Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F GI S S L G A T K K Sbjct: 118 RTSPYKYSFTSMVVRSKDDSGIHSWSDLKGKKAAGAASTNYMKI----AKKLGAKLVVYD 173 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + R D D + + + +P + + Sbjct: 174 NVTNDVYMKDLVNGRTDVIINDYYLQKIAVAAVKDKYA-IKINQGLYANPYSTSF 227 >gi|257486648|ref|ZP_05640689.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331010126|gb|EGH90182.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 260 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 80/222 (36%), Gaps = 11/222 (4%) Query: 31 KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90 K+ L+ G++ F A+G GFD+D A+ + +++ + Sbjct: 23 KEYKELRFGVDPSYAPFESKAADGSLVGFDIDLGNAICKEL---KVTCKWVESDFDGMIP 79 Query: 91 ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS-SVSQLSGASIC 149 L++++ D + + T RE + F + + K G + + L G ++ Sbjct: 80 GLKARKFDGVISSMTVTPAREKV--IDFSNELFSGPTSLVYKKGAGFTADPASLKGKTVG 137 Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + GT E + + +++ A + R DA D+ L + Sbjct: 138 YEQGTIQEAYAKAVLDKAGVSTK--AYANQDQVYADLTSGRLDASIQDMLQAELGFLKSP 195 Query: 210 RPSEH---VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 +++ + + + A I +G+ E ++ AM Sbjct: 196 AGADYEVSKPIDSELLPAKTAIGIAKGNKELKALLDKGIKAM 237 >gi|160942990|ref|ZP_02090228.1| hypothetical protein FAEPRAM212_00467 [Faecalibacterium prausnitzii M21/2] gi|158445684|gb|EDP22687.1| hypothetical protein FAEPRAM212_00467 [Faecalibacterium prausnitzii M21/2] Length = 215 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 79/222 (35%), Gaps = 19/222 (8%) Query: 38 CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97 N + G+++G DVD +A++ + ++Q ++ L++Q + Sbjct: 1 MATNAAFPPYEMTTDAGEFEGIDVDTAKAIAEKLG---LELQIDDMDFDAALLSVQQGKA 57 Query: 98 DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157 DI+ T R+ + F Q I+ I+S L+G I Q GTT Sbjct: 58 DIVMAGVTVTDERKAVM--DFSDSYATGIQSIIVPNDSEIASPDDLAGKKIGTQRGTTGY 115 Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 + +D F + + ++ A + DA D + A + P +L Sbjct: 116 IYCSDDFG----DENVVAYDDGLTAVQALNNGQVDAVVIDNA--PAQEFVAANPG-LKVL 168 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259 ++ A + +G + + V+ EEL Sbjct: 169 DTSYAEEDYAIGMAKG-SALEDAVNKAL------EELKADGT 203 >gi|319745606|gb|EFV97907.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus agalactiae ATCC 13813] Length = 277 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 76/249 (30%), Gaps = 12/249 (4%) Query: 2 YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K I+ + + + S+ + KK + F+ V +G GFD Sbjct: 4 KKVLSVTGIILVTVASLAACSSKSHTTKTGKK--EVNFATVGTTAPFSYV-KDGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ +A+ D K+ + F + S + + N ++ R S F Sbjct: 61 IEVAKAVFK--GSDNYKVTFKKTEWSSVFTGIDSGKFQMGGNNISYSSER--SQKYLFSY 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + K I + + ++G V GTTT L ++ K H + + Sbjct: 117 PIGSTPSVLAVPKNSNIKAYNDITGHKTQVVQGTTTAKQLENFNKEHQKNPVTLKYTNEN 176 Query: 181 --EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237 +I + D + + N + +P + P Q + Sbjct: 177 ITQILTNLSDGKAD-FKLFDGPTVNAIIKNQGLTNLKTIPLTMRDQPYIYFIFGQDQKDL 235 Query: 238 YNIVSWTHY 246 V+ Sbjct: 236 QKYVNNRLK 244 >gi|254452220|ref|ZP_05065657.1| arginine/ornithine ABC transporter, periplasmic binding protein [Octadecabacter antarcticus 238] gi|198266626|gb|EDY90896.1| arginine/ornithine ABC transporter, periplasmic binding protein [Octadecabacter antarcticus 238] Length = 270 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 72/229 (31%), Gaps = 22/229 (9%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ G+ F G+ G+DVD +++ + D ++++ AL + Sbjct: 27 TLRVGMECTYAPFNYRTDAGELAGYDVDVATGVAAIMGAD---LEFVCQQWDGMIPALLA 83 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI--------SSVSQLSGA 146 + D++ + T R + F + + + G Sbjct: 84 NKFDLIVASMSITNQR--LEKIDFSSPYRDSVGRLVGRSEANLNLFDEASNPIPENFKGL 141 Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 I ++ +T E +F A ++++ E + R R DA + + L Sbjct: 142 RIGIERASTYEA----WFNATLPDAETVLYDGNEPMYLDLRNGRVDAIMTNPMKAHLSFL 197 Query: 207 TNDRPSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVT 250 + S + IS+ + QG E + ++ Sbjct: 198 ATEEGSGFEFVSPAISEIEYFGTGVGIGLRQGQPELMARLDAAIKQLIN 246 >gi|208434843|ref|YP_002266509.1| amino acid ABC transporter, periplasmic binding protein [Helicobacter pylori G27] gi|208432772|gb|ACI27643.1| amino acid ABC transporter, periplasmic binding protein [Helicobacter pylori G27] Length = 258 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 31/251 (12%), Positives = 74/251 (29%), Gaps = 13/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ +L + FF F + + + + + G F G G+D Sbjct: 1 MKKVLFLFLLVIS--FFGGFLNASGLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R L+ + I++ + L+S + D+++ T ++ Sbjct: 59 VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQATFDKSL 114 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G ++ K I + + G +T A + + + Sbjct: 115 PYSYSGTIMLVRKDENRIKDIKDIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSM 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R D A+ T+ + + I + + Sbjct: 169 VQALLLVAQKRADLTLNSSLAILNYLNTHKDNPFKIAWESKEKDGGASFVINKHQEKALE 228 Query: 240 IVSWTHYAMVT 250 +++ ++ Sbjct: 229 LINQAMQRLIN 239 >gi|194016700|ref|ZP_03055313.1| spore amino acid ABC superfamily ATP binding cassette transporter, binding protein [Bacillus pumilus ATCC 7061] gi|194011306|gb|EDW20875.1| spore amino acid ABC superfamily ATP binding cassette transporter, binding protein [Bacillus pumilus ATCC 7061] Length = 255 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 72/224 (32%), Gaps = 11/224 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 L + F + GFDVD AL+ ++ ++ A Sbjct: 32 DDKTLVMATSADYPPFESKDGD-KIVGFDVDLATALAKKNGYK---LEIQDMDFASLVSA 87 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 L++ + DI+ R+ + F + Y + K G+ + L ++ VQ Sbjct: 88 LKTNKADIVLAGMTPDEKRKK--QVDFSDVYYNAKNLVVSKKSSGMKTEKDLKDKTVGVQ 145 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 G+ + K +N+K ++ +I +A R DA + Sbjct: 146 LGSIQQDEANSLQKKYNLKVEDR--NKISDIIQEIKAGRFDAAIIEDKVAAGYLKKEKDF 203 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + + S +A + +++ + + M EL Sbjct: 204 QAFDLSGSTNNGSAIAF---KKNSDLTAKFNKSLKEMQDNGELD 244 >gi|22537782|ref|NP_688633.1| ABC transporter, substrate-binding protein [Streptococcus agalactiae 2603V/R] gi|76787597|ref|YP_330258.1| amino acid ABC transporter, amino acid-binding protein, putative [Streptococcus agalactiae A909] gi|77406243|ref|ZP_00783311.1| ABC transporter, substrate-binding protein [Streptococcus agalactiae H36B] gi|77408256|ref|ZP_00784999.1| ABC transporter, substrate-binding protein [Streptococcus agalactiae COH1] gi|77411889|ref|ZP_00788221.1| ABC transporter, substrate-binding protein [Streptococcus agalactiae CJB111] gi|22534674|gb|AAN00506.1|AE014266_17 ABC transporter, substrate-binding protein [Streptococcus agalactiae 2603V/R] gi|76562654|gb|ABA45238.1| amino acid ABC transporter, amino acid-binding protein, putative [Streptococcus agalactiae A909] gi|77162049|gb|EAO73028.1| ABC transporter, substrate-binding protein [Streptococcus agalactiae CJB111] gi|77173114|gb|EAO76240.1| ABC transporter, substrate-binding protein [Streptococcus agalactiae COH1] gi|77175146|gb|EAO77947.1| ABC transporter, substrate-binding protein [Streptococcus agalactiae H36B] Length = 277 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 76/249 (30%), Gaps = 12/249 (4%) Query: 2 YKDF-FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 K I+ + + + S+ + KK + F+ V +G GFD Sbjct: 4 KKVLSVTGIILVTVASLAACSSKSHTTKTGKK--EVNFATVGTTAPFSYV-KDGKLTGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ +A+ D K+ + F + S + + N ++ R S F Sbjct: 61 IEVAKAVFK--GSDNYKVTFKKTEWSSVFTGIDSGKFQMGGNNISYSSER--SQKYLFSY 116 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + K I + + +SG V GTTT L ++ K H + + Sbjct: 117 PIGSTPSVLAVPKNSNIKAYNDISGHKTQVVQGTTTAKQLENFNKEHQKNPVTLKYTNEN 176 Query: 181 --EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP-AIIQGDTEW 237 +I + D + + N + +P + P Q + Sbjct: 177 ITQILTNLSDGKAD-FKLFDGPTVNAIIKNQGLTNLKTIPLTMRDQPYIYFIFGQDQKDL 235 Query: 238 YNIVSWTHY 246 V+ Sbjct: 236 QKYVNNRLK 244 >gi|16331349|ref|NP_442077.1| hypothetical protein slr0341 [Synechocystis sp. PCC 6803] gi|1001520|dbj|BAA10147.1| slr0341 [Synechocystis sp. PCC 6803] Length = 318 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 84/254 (33%), Gaps = 14/254 (5%) Query: 6 FVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDF 63 +++ + A L IK G L+ I V F W G VDF Sbjct: 21 LLTLSAWALQSLVVPPVQAETVLESIKSTGLLEVAIRDDSVPFGFRDGPANQWTGICVDF 80 Query: 64 CRALSSA----IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 +AL + + P +++ + R+ + K + + R++ L + F Sbjct: 81 IQALQAEVSATLGGQPLLVKFYQSSLFNRYNLVAEKVVVVECGPNTI--RRDLPLPITFS 138 Query: 120 PITYFDGQGFIMHKK--KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + G F++ S L G I V GT+ LA + + + F Sbjct: 139 RPFFVTGTQFLIPADRLGSFDSDGDLRGERIGVLGGTSNSEFLAARYPEAEL-INFQGFT 197 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP---SEHVILPDIISKSPLAPAIIQGD 234 A R DA+ GD L+ L D P S + P + + Sbjct: 198 ARRLGVEALMQGRIDAFAGDGILLFGEALVLDIPLGRSYRLYPPYPLDCQGYGLILPADQ 257 Query: 235 TEWYNIVSWTHYAM 248 EW N+V+ + Sbjct: 258 PEWENLVNRVVTSP 271 >gi|315925478|ref|ZP_07921689.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315621379|gb|EFV01349.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 259 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 69/239 (28%), Gaps = 13/239 (5%) Query: 1 MYK--DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M K F + I + + + + +T F NG G Sbjct: 1 MKKGLKFGLVIAMALAMVMAFTACGSGNSSSGSSDKKYIIATDTTFAPFEFEDKNGKRVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D+D +A++ D + L +L+S Q D + T R+ F Sbjct: 61 IDMDLLKAIAKDQHFDYTV---KALGFNAAVQSLESDQSDAVIAGMSITSERKK--KFDF 115 Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + G G + I S L G ++ V+ GT + + FE Sbjct: 116 SDPYFDSGVGMAVKANNTAIKDYSDLKGKTVAVKTGTEGATFANENKAKYGYS--IKTFE 173 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 + ++ A D L ++ + + + A+ +G Sbjct: 174 DSANMYEDVKSGNSAACFEDYPVLGYAIAK---GQPLKLVGKLQAGNSYGFAVHKGKNA 229 >gi|255656165|ref|ZP_05401574.1| amino-acid ABC transporter,substrate-binding protein [Clostridium difficile QCD-23m63] gi|296450401|ref|ZP_06892157.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Clostridium difficile NAP08] gi|296879476|ref|ZP_06903470.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Clostridium difficile NAP07] gi|296260662|gb|EFH07501.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Clostridium difficile NAP08] gi|296429622|gb|EFH15475.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Clostridium difficile NAP07] Length = 267 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 71/197 (36%), Gaps = 8/197 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + +L L+ F + ++ + +++ ++ + FA + + KGF+ Sbjct: 1 MKKIKLIIMLALVSAFLITGCSSENNKNK-EEQKTIRVATSGTYYPFAFKEKD-KLKGFE 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VDF + ++++ + F L++ + D++S T RE F Sbjct: 59 VDFWDEFAKRTNCK---VEWVLTDFSGLFGLLEADKADVVSAQLTATPEREK--KYDFSD 113 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G I+ + I S+ L G + V G L + + +K + Sbjct: 114 AYNYSGTNIIVREDDTSIKSIDDLVGKKVGVGTGAVANEILKEKYPNDEIKIVNYSSATL 173 Query: 180 EEIDAAYRAHRCDAYTG 196 + R DA Sbjct: 174 KGNYQDLEMGRLDAVVA 190 >gi|259506394|ref|ZP_05749296.1| amino acid ABC superfamily ATP binding cassette transporter, secreted component [Corynebacterium efficiens YS-314] gi|259166035|gb|EEW50589.1| amino acid ABC superfamily ATP binding cassette transporter, secreted component [Corynebacterium efficiens YS-314] Length = 302 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 72/229 (31%), Gaps = 13/229 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 +RG L G N F ++G+ G ++D RA++ + D + + Sbjct: 54 ERGVLTAGANPPFPPFEFKDSDGEIIGVEMDLARAMAGVMGLDYQP---QEQDFSLILPS 110 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 +Q+ +D+ + R + F Y Q ++ G +I VQ Sbjct: 111 VQAGTVDMGASGFTDNEER--RMNFDFIDFLYAGVQWAQSSDREEDIDPDNACGLTIAVQ 168 Query: 152 AGTTTELT-----LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206 T E + ++ + A R DA D Sbjct: 169 RTTVAETDDVRPKSEQCVAEGKEPITVLAYDTADTAATALILGRADALAADSPITAWAVA 228 Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 +D ++ DI +P A+ + ++E + + ++ + Sbjct: 229 RSDD--RIELVGDIFMAAPFGFALPK-ESELTPVAARAFQHLIDTGDYE 274 >gi|238022193|ref|ZP_04602619.1| hypothetical protein GCWU000324_02100 [Kingella oralis ATCC 51147] gi|237866807|gb|EEP67849.1| hypothetical protein GCWU000324_02100 [Kingella oralis ATCC 51147] Length = 306 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 33/265 (12%), Positives = 70/265 (26%), Gaps = 21/265 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKK-----------RGFLKCGINTGLVGFAE 49 M+K ++ + S + Sbjct: 16 MFKKHILTATLCSAFLLAACSGGNGGASSNAGASAASSAGLDVSKTYIVATDASYPPMEY 75 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 + + GF D A + + K++++ + F + D+ + Sbjct: 76 MDND-HVVGFSHDILDAAAKS---QNVKLEFVNTPFEGLFANVDKGDSDVGLASITINDE 131 Query: 110 REISLGLAFRPITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ L F + Q I + S + L + VQA T+ +L L Sbjct: 132 RK--QQLDFSDPYFTATQMIITENKNSNAVKSFADLKNRTASVQAATSGDLILQKL--QG 187 Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227 FE + DA GD S + + +V++ + Sbjct: 188 KDSTKIKRFETMPLAFKELETGGVDAVVGDSSVVAFYVKQHPDAKLNVVVDPSFIQEHYG 247 Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAE 252 +G ++ A + ++ Sbjct: 248 FVFKKGRSDGLREAINKGLAQIKSD 272 >gi|307728117|ref|YP_003905341.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] gi|307582652|gb|ADN56050.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] Length = 264 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 76/223 (34%), Gaps = 12/223 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L+ G+ F NG+ +G D+D A+ +A +++ + ALQ Sbjct: 30 TLRFGLEAQYPPFESKGPNGELQGLDIDVGNAVCAAA---HMTCKWVETSFDGLIPALQG 86 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 ++ D ++ + T R ++ + Q + S L G + V + Sbjct: 87 RKFDAINSAMNATEQRRQTIDFT-TVVYRVPTQLIAKRDSGLLPSAEALKGKRVGVLQAS 145 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 E +++ + ++ ++ A R DA A L+ ++ Sbjct: 146 IQETFAKTHWEPAG--VTVVAYQDQNQVYTDLVAGRLDATLVLAPAGQTGFLSKPNGKDY 203 Query: 215 VILPDIISKSP-----LAPAIIQGDTEWYNIVSWTHYAMVTAE 252 + + +A I +GDT ++ A V A+ Sbjct: 204 AFVGQPVRDDKILGSGIAYGIRKGDTALRERLNAAI-AKVQAD 245 >gi|262164525|ref|ZP_06032263.1| amino acid ABC transporter amino acid-binding protein [Vibrio mimicus VM223] gi|262026905|gb|EEY45572.1| amino acid ABC transporter amino acid-binding protein [Vibrio mimicus VM223] Length = 301 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 85/247 (34%), Gaps = 20/247 (8%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 + +++ L IK+RG L+ G++T V +A G+ GF++D + L++ Sbjct: 47 AFTLPAVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW 105 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++++P AL +K+ D++ T R S + F G K Sbjct: 106 ---QVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAASK 160 Query: 134 K--KGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 K +G S + + I + G T + F + F+ + Sbjct: 161 KLAEGFSKLEDFNKRNVKIAARRGAFTVQVARETFPKA----SVLQFDDDAQAFQEVING 216 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWT 244 A + + + + +SK A A+ G+ + I T Sbjct: 217 NAHAVIASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKKAYFDQWIADRT 275 Query: 245 HYAMVTA 251 + A Sbjct: 276 ADGWLQA 282 >gi|261493365|ref|ZP_05989891.1| putative arginine ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496631|ref|ZP_05993011.1| putative arginine ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307834|gb|EEY09157.1| putative arginine ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311009|gb|EEY12186.1| putative arginine ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 241 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 76/247 (30%), Gaps = 28/247 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K S + L + + + F G+ GFD Sbjct: 1 MKKLLLASAIAFATLSANAQE-------------TITFAMEPSYAPFETTNEKGEVIGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD +AL + + ++ + L+ K D + D T +R+ + F Sbjct: 48 VDIAKALCEEL---KATCEFKTQSFDSLIAGLKFKNFDAIISGMDITEVRQKQVA--FTN 102 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++ K K + ++ VQ GTT + L+ K +Y+ + ++ Sbjct: 103 AYLENSVSYVAMKGKFTPETA----KNVGVQNGTTFQQYLSKNAK----QYNLKPYASLQ 154 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R D GD L T ++ + A+ + +T Sbjct: 155 SAVLDLKNGRVDMVFGDTPVLAEWLKTEKELDFVGEKVVDKAFFGNGYGIAVNKSNTALL 214 Query: 239 NIVSWTH 245 ++ Sbjct: 215 EKLNSAL 221 >gi|195978381|ref|YP_002123625.1| glutamine ABC transporter, glutamine-binding protein/permease protein GlnP [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975086|gb|ACG62612.1| glutamine ABC transporter, glutamine-binding protein/permease protein GlnP [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 713 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 65/203 (32%), Gaps = 16/203 (7%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 + L ++ T+ +A + + +T F ++ +KG DVD + Sbjct: 1 MLAMLSVILMTAGIASAETIDIV---------SDTAYAPFEFKDSDQVYKGIDVDIINEV 51 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 + + I A+QS Q D L T T R+ F Y Sbjct: 52 AKRKGWN---INMTFPGFDAAVNAIQSGQADALMAGTTITAARQKV--FHFSDPYYDTKI 106 Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 K I S+L G ++ V+ GT + L Y K++ F+ + + + Sbjct: 107 VIATRKASPIKKYSELKGKTVGVKNGTAAQAFLDKYKKSYGY--TVKTFDTGDLMYNSLA 164 Query: 188 AHRCDAYTGDISALYALKLTNDR 210 DA D + Sbjct: 165 TGSIDAVMDDEPVIQYAINQKQD 187 Score = 87.1 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 65/222 (29%), Gaps = 11/222 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 K ++ F +G++ G D+D +A++ I+ A+Q+ Sbjct: 263 VYKIVADSSFAPFEFQIGSGEYVGIDMDLIKAIAKQ---QGFTIEISNPGFDAALNAVQA 319 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 Q D + T R F Y + I S L G + + GT Sbjct: 320 GQADAVIAGMSITPAR--REIFDFSDSYYTSNIRLGVKSGSSIKSYKDLKGKIVGAKKGT 377 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 + L + F+ + + + D D L+ R + Sbjct: 378 ASYDFLESNKDIYGY--RLKAFDEASSMYDSLNSGSIDGLMDDE---AILRYAIQRGHKL 432 Query: 215 VILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMVTAEELG 255 I A+ +G + E + + A+ + + Sbjct: 433 DIPIKGEPSGEYGFAVKKGANPELIEMFNNGLAALKASGKYD 474 >gi|68535730|ref|YP_250435.1| glutamate ABC transport system, solute-binding protein [Corynebacterium jeikeium K411] gi|260578185|ref|ZP_05846105.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium jeikeium ATCC 43734] gi|68263329|emb|CAI36817.1| glutamate ABC transport system, solute-binding protein [Corynebacterium jeikeium K411] gi|258603724|gb|EEW16981.1| glutamate ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium jeikeium ATCC 43734] Length = 298 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 82/263 (31%), Gaps = 21/263 (7%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR----ALSSA 70 L +L DI + G + G E + + G D D R ++ Sbjct: 24 LTACGSGGARDLLADI-ESGHVVMGTKYDQPNLGERTPDKQFAGLDTDVSRYVVEYIAKK 82 Query: 71 IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130 +I++ + +R + + ++++++ R + F Q + Sbjct: 83 HGWATPEIEWRETPSAQRETLINNGEVNMITATYSINKGR--LKAVDFAGPYVVTHQALL 140 Query: 131 MHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 + + GI+ ++ + G +C +G+T + D F+ + Sbjct: 141 VREDSGINGLNDIAPGTRLCSVSGSTPAQKVKDALPE----VQLQEFDTYAACAEGLKQG 196 Query: 190 RCDAYTGDISALYALKLTNDR--PSEHVILPDIISK------SPLAPAIIQGDTEWYNIV 241 DA T D + L ++ ++ + +GD + V Sbjct: 197 VVDATTTDATILAGFAQRYKERFDEDYSVIQLKNDDGSFWTNENYGIGLPKGDDKAKAEV 256 Query: 242 SWTHYAMVTAEEL-GITQKNINQ 263 + M + E I KN+ Sbjct: 257 NEALNEMHDSGEFQKIVAKNLGD 279 >gi|325267963|ref|ZP_08134611.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Kingella denitrificans ATCC 33394] gi|324980566|gb|EGC16230.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Kingella denitrificans ATCC 33394] Length = 281 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 74/263 (28%), Gaps = 19/263 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG----------FLKCGINTGLVGFAEV 50 M F + + ++ + + + G + + Sbjct: 1 MRTKSFSLLALAAVFTLSACGGSQNSNSNPAASGAKAAGLDVNKTYIVATDASYAPMEYM 60 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 N GF D A + + K++++ K F + DI + R Sbjct: 61 -ENNAVVGFSHDILDAAAKS---QNVKLEFVNTPFKGLFANVDKGDSDIGLASITINDER 116 Query: 111 EISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + L F + Q + + I + + L VQA T+ +L L D Sbjct: 117 K--QQLDFSDPYFEATQMIVTTDRNANIKTFADLKTRPASVQAATSGDLILQDL--QGKD 172 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + FE + + DA GD S + N + ++ K A Sbjct: 173 SQNIKRFETMPLAFKELESGGVDAVVGDSSVVAYYVKQNPNAKLNTVVDPSFVKEHYGFA 232 Query: 230 IIQGDTEWYNIVSWTHYAMVTAE 252 +G + A + + Sbjct: 233 FKKGRNDGLREAINKGLAQIKTD 255 >gi|294790681|ref|ZP_06755839.1| ABC-type amino acid transport system, secreted component [Scardovia inopinata F0304] gi|294458578|gb|EFG26931.1| ABC-type amino acid transport system, secreted component [Scardovia inopinata F0304] Length = 332 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 74/272 (27%), Gaps = 36/272 (13%) Query: 6 FVSILCLIILFFTSFSTNASILGD-----------------------IKKRGFLKCGINT 42 + ++CL + S + L + ++++G L G N Sbjct: 36 LIFLICLSLFLSASACGTSDGLDERGQSFDFSSIPTNKKIQSMLPQELREKGVLTVGTNA 95 Query: 43 GLVGFAEVKANGDWK-GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILS 101 + G+++D + ++ + K Q + + A+ K+ + Sbjct: 96 AYAPAEYTGEDSRVVLGYEIDLIKGIARVMG---LKTQIVQASFNSIIPAV-GKKYTVGV 151 Query: 102 RNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTL- 160 T RE + F + +V+ L G I VQ GT E Sbjct: 152 SGFTITAEREK--SVNFVQHYRSGMSFVVNKGNPKKITVNNLCGRKISVQTGTMQETDAG 209 Query: 161 ---ADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217 + A + + DA D + + +L Sbjct: 210 TMSEKCLSRGKPAITIRSYRDQPSATIALISKQVDAMYTDTP--VGEYAVKETEGKLQML 267 Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 +P+ I + D + ++ Sbjct: 268 GKAKGVAPMGIVIAKNDMATARAIKAALQILI 299 >gi|258543770|ref|ZP_05704004.1| L-cystine ABC superfamily ATP binding cassette transporter, binding protein [Cardiobacterium hominis ATCC 15826] gi|258521006|gb|EEV89865.1| L-cystine ABC superfamily ATP binding cassette transporter, binding protein [Cardiobacterium hominis ATCC 15826] Length = 257 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 66/211 (31%), Gaps = 15/211 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++ L FT S+L I G + G F +G G+D Sbjct: 1 MKKWLLATL----ALAFTHAYAADSLLERINAHGTVTIGTEGTYAPFTYHDESGKLTGYD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ RA++ + K+ + L++++ D+++ T E Sbjct: 57 VEVARAVADKLG---FKVDFKETAWDAMLAGLKAERFDLVANQVALT-TPERRATFDKSA 112 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + I +++ + G Q ++ +A A + + + Sbjct: 113 EYSYSGPMAVSRADDTRIQALADVKGLKSA-QTLSSNYGEMAKAAGA-----EIVPVDGL 166 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 + + R D D AL Sbjct: 167 AQALILVQQKRADFTFNDSLALLDYLKKTPD 197 >gi|306831687|ref|ZP_07464844.1| glutamine ABC superfamily ATP binding cassette transporter permease protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|261411856|gb|ACX81324.1| Sbs9 [Streptococcus gallolyticus subsp. gallolyticus] gi|304426112|gb|EFM29227.1| glutamine ABC superfamily ATP binding cassette transporter permease protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 745 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 74/222 (33%), Gaps = 11/222 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 K +++ F +G+++G DV+ +A++ + ++ A+Q+ Sbjct: 289 TYKIVMDSSFAPFEYQNDSGEYEGIDVELIKAIAEQQGFN---VEISNPGFDAALNAVQA 345 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 Q D + T R+ F Y + + S S L G ++ + GT Sbjct: 346 GQADAVMAGMSITDARKEI--FDFSDAYYTSNILLAVKSGSSVKSYSDLKGLTVGAKNGT 403 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 ++ L+++ + F+ + + + DA D L + + Sbjct: 404 SSYTWLSEHADEYGY--TLKAFDEASTMYDSLNSGSIDALMDDE---AVLLYAIQQGRDF 458 Query: 215 VILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255 A+ + + E + + A+V + E Sbjct: 459 ETPIAGEKSGEYGFAVSKGSNPELIEMFNNGLAALVESGEYD 500 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 66/211 (31%), Gaps = 18/211 (8%) Query: 1 MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M +L + +FF A + +T F ++ +KG Sbjct: 1 MKHKLKALMLAIFSVFFVFGVKAQADT---------ISIVSDTAYAPFEFKDSDQTYKGI 51 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD + ++ D + A+QS Q D L T T R+ F Sbjct: 52 DVDIIKEVAEREGWDYEQ---TYPGFDAAVNAVQSGQADALMAGTTVTDARKKV--FTFS 106 Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y IS SQL G ++ V+ GT + L ++ + F+ Sbjct: 107 DTYYDTSIVVYTKSGNTAISKYSQLKGKTVGVKNGTAAQTWLDEHADKYGY--TVKTFDT 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + ++ + + DA D + Sbjct: 165 SDLMNNSLDSGSIDAAMDDTPVVQYAISQGK 195 >gi|217965060|ref|YP_002350738.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes HCC23] gi|290892961|ref|ZP_06555951.1| glutamine ABC transporter [Listeria monocytogenes FSL J2-071] gi|217334330|gb|ACK40124.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes HCC23] gi|290557537|gb|EFD91061.1| glutamine ABC transporter [Listeria monocytogenes FSL J2-071] gi|307570380|emb|CAR83559.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes L99] Length = 480 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 96/297 (32%), Gaps = 22/297 (7%) Query: 1 MYK----DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M K ++I C+ FT NA + G +T F + +G+ Sbjct: 1 MKKFSRFILMMAIACVAAFIFTGNGLNAKAAEE-----TYLIGTDTTFAPFEF-EKDGEH 54 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D+D +A++ K + + AL++ Q+D + T R+ Sbjct: 55 VGIDMDILKAIAKD---QNFKYEIKAMGFNAAVQALEANQVDGVIAGMSITDERK--QKF 109 Query: 117 AFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + G I+ I + L G + V+ GT + +V Sbjct: 110 DFSDPYFDSGVVMGILKDNDEIKTYDDLKGKKVAVKTGTEGYAFAEKI--KDKYDFDIVV 167 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 F+ ++ + A D L T + I+ D + A+ +G Sbjct: 168 FDDSAQMYDDVKTRNSVACFDDYPVLAYGVQT---GNGLKIVTDKEKGNSYGFAVNKGKN 224 Query: 236 EWYNIVSWTHYAMVTA-EELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291 + + A E +N + N + + F+GI KSS GL Sbjct: 225 QELLEKFNAGLVNIKASGEYDKILENYLGDNAIKENTNEKGFMGIIKSSWPALLSGL 281 >gi|83748012|ref|ZP_00945042.1| ABC Transporter Amino Acid binding protein [Ralstonia solanacearum UW551] gi|207738692|ref|YP_002257085.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] gi|83725314|gb|EAP72462.1| ABC Transporter Amino Acid binding protein [Ralstonia solanacearum UW551] gi|206592060|emb|CAQ58966.1| amino-acid-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] Length = 283 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 84/261 (32%), Gaps = 16/261 (6%) Query: 2 YKDFFVSILCLIILFF--TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 ++F L F T+ + DIKKRG L G F V NG GF Sbjct: 6 RRNFLRLALGTSAAFALPTTAFAEGGSIADIKKRGKLVVGTEAAYEPFEFV-ENGQVVGF 64 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D ++ + + ++ L + L S + D ++ + T R F Sbjct: 65 GRDILVLMADKLGVELEQMN---LPFQGLLPGLMSHKFDFVATSVSITPERAKRFA--FS 119 Query: 120 PITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-----HP 173 + I+ L+G + Q G++++ + K + Sbjct: 120 QPVGVVRPVLMARVDDTSITRDLDLAGKVLGTQMGSSSQPAAEQFEKTLKEQRGKGYADT 179 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 +F+ ++ A D I + A +P I+ ++ LA Sbjct: 180 KLFQAYPDVAIALNNKTVD--VAFIPSNVAAIQMRKQPGAFKIVGEVGQPRLLAWVANPQ 237 Query: 234 DTEWYNIVSWTHYAMVTAEEL 254 D E ++ T + + +L Sbjct: 238 DLEIRKFINDTLDELRASGKL 258 >gi|300718474|ref|YP_003743277.1| Glutamine ABC transporter, solute-binding protein [Erwinia billingiae Eb661] gi|299064310|emb|CAX61430.1| Glutamine ABC transporter, solute-binding protein [Erwinia billingiae Eb661] Length = 276 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 75/233 (32%), Gaps = 11/233 (4%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + + + + + G L+ + ANG + GFDV+F ++ I + Sbjct: 24 AASAASNDNPYGLIEPGHLRVASLGDAKPYTFTDANGQFTGFDVEFFTDVAHRIG--INN 81 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 + ++ + A+ + Q D T RE + F + K G+ Sbjct: 82 VDFIGQDFAGILPAVANGQYDAGVAAIGITKARE--QTVDFSSGYLAGYLTVLTSKTSGV 139 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 +V L+ + V GT E D+FK + + F +A DA D Sbjct: 140 KNVDTLAKHRLAVIQGTLQESYAVDHFK----QTDLVRFPDNNAAISAMNNGTVDAVFLD 195 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 + K DR +P AI + + + + + Sbjct: 196 ---YESAKTYADRYDLIHAADIPSFDAPAGFAIAKNKVAFKTALDKAIKSAME 245 >gi|218709146|ref|YP_002416767.1| lysine-arginine-ornithine-binding periplasmic protein [Vibrio splendidus LGP32] gi|218322165|emb|CAV18279.1| Lysine-arginine-ornithine-binding periplasmic protein [Vibrio splendidus LGP32] Length = 257 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 82/248 (33%), Gaps = 21/248 (8%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + ++ + F ++G GFD++ AL D ++ + + Sbjct: 20 QAKEIRLASDFTYPPFNYKNSDGVPVGFDIEIADALCEQAKLD---CTWVSQSWDSLIPS 76 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ-LSGASICV 150 L +++ D++ + T R+ + F Y F+ K S L+G +I V Sbjct: 77 LLARKSDVIMASMRITEERKR--KILFTDKYYQTPAVFVAAKSAEFSIDEAGLAGKTIGV 134 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 Q GT + + D F + + +E+ + R D G+ L L Sbjct: 135 QQGTIHDRYVTDKF---GDVANIKRYTGQDEVYLDMQNGRLDLTFGNSDQLSLAFLDKKE 191 Query: 211 PSEHVILPDIISKSPL-----APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265 ++ A A+ + D++ + EE+ ++++ Sbjct: 192 GEGFEFKGKAVTDKAYIGEGTALALRKQDSKLAKQFNAAI------EEIRANGT-YDKIA 244 Query: 266 KDTTNPDV 273 D+ Sbjct: 245 AKYFTFDI 252 >gi|312865925|ref|ZP_07726146.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus downei F0415] gi|311098329|gb|EFQ56552.1| ABC transporter, substrate-binding protein, family 3 [Streptococcus downei F0415] Length = 273 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 83/256 (32%), Gaps = 20/256 (7%) Query: 2 YKDFFVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAE---VKA 52 K +L L+ + + S +A S L D++KRG L + F V Sbjct: 4 KKIVTAVLLVLLSVSLVACSNSAKSTKTDSSLSDVQKRGTLVVATSPDFAPFEFKRLVNG 63 Query: 53 NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112 G DV+ + ++ + KI +L ++ ++ + D T + Sbjct: 64 RDTVAGVDVELSKEIAKEL---HVKIHFLTVSFTNVLGSVAIGKADYGISGISVTE--DR 118 Query: 113 SLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170 F + ++ K +SV +G S+ Q GT E LAD Sbjct: 119 KNSFEFTEPYFESKNVVVIRKADLAKYTSVDSFAGKSVSAQKGTIQEGVLADQIPKA--- 175 Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230 + + E ++ + + + +N + I + S A A+ Sbjct: 176 -SAVSLTQNSEGVNELKSGKIQGIVMESAIAQGYINSNKDLTLAKITLKKVDGSSYAIAL 234 Query: 231 IQGDTEWYNIVSWTHY 246 +G N ++ Sbjct: 235 PKGSIALRNKLNSIIT 250 >gi|238795813|ref|ZP_04639326.1| Arginine-binding periplasmic protein 1 [Yersinia mollaretii ATCC 43969] gi|238720276|gb|EEQ12079.1| Arginine-binding periplasmic protein 1 [Yersinia mollaretii ATCC 43969] Length = 243 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 78/216 (36%), Gaps = 18/216 (8%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ F + AN +GFD+D AL + D + +L+ Sbjct: 22 TIRFAAEATYPPFEFIDANNKMQGFDIDLANALCKEMQAD---CTFTNQAFDSLIPSLKF 78 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K+ D + D T R+ + F Y + FI K ++ ++ L G + +Q G+ Sbjct: 79 KRFDAVISGMDITPERQKQVA--FTKPYYDNSALFIAEKG-KVADLAALKGKRVGMQNGS 135 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T + L + + + ++ + + R DA GD + + + ++ Sbjct: 136 THQKYL----MEKHPEITAVPYDSYQNAILDLKNGRLDAVFGDTAVVNEW---LKQNNQL 188 Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245 + D ++ + A+ Q +TE + Sbjct: 189 AAVGDKVTDADYFGTGLGIAVRQTNTELLGKLDAAL 224 >gi|296102391|ref|YP_003612537.1| extracellular solute-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056850|gb|ADF61588.1| extracellular solute-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 257 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 80/251 (31%), Gaps = 25/251 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M V + L+ F + +T L+ G+ F A+G+ +GFD Sbjct: 1 MKLRALVVGMGLLCTFSSFAAT------------ELRYGLEAEYPPFESRNASGELEGFD 48 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ A+ A K ++ + L +K+ D ++ + T R + F Sbjct: 49 VELGNAICKAA---ALKCTWVETSFDALIPGLVAKKFDAINSAMNITEQRRK--SIDFTQ 103 Query: 121 ITYFDGQGFIMHKKKGIS-SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y + + + L G +I V G+ E ++++ + ++ Sbjct: 104 PIYRIPSQLVGKAGTAVEATPEGLKGKTIGVLQGSIQETYAKEHWEKQG--VTVVSYKDQ 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-----LAPAIIQGD 234 R DA +A A L+ + + +S + + +GD Sbjct: 162 NMAWGDLLNGRIDASLVMSAAGQAGFLSKPQGKGFGFIGKPVSDDTILGSGIGFGLRKGD 221 Query: 235 TEWYNIVSWTH 245 + Sbjct: 222 EATKKQLDAAI 232 >gi|257875562|ref|ZP_05655215.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] gi|257809728|gb|EEV38548.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] Length = 712 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 73/252 (28%), Gaps = 20/252 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M I+ + L S S + K G + F N ++ G D Sbjct: 1 MSFALIALIISIFTLSVKSASAEETTY---------KIGTDLTFAPFEFQNENNEYVGID 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + PL +QS Q+D + T R+ + F Sbjct: 52 IDLLNAIAED---QGFAVDLRPLGFDASIQGVQSNQLDGMIAGMSITDERKET--FDFSD 106 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G + I+S L G ++ + GT + L + + Sbjct: 107 PYFDSGIQMAVAADNDSITSYEDLEGETVGAKVGTESARFLEENKDQYGYDIKL-----Y 161 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 ++ Y A R L + ++ + + A+ +G + Sbjct: 162 DDATGLYGAVRNGTVAAAFDDYPVLGYAINNGEPMKLVGEPEKGASYGFAVRKGQNQELL 221 Query: 240 IVSWTHYAMVTA 251 A + A Sbjct: 222 EKFNAGLANMKA 233 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 36/243 (14%), Positives = 78/243 (32%), Gaps = 15/243 (6%) Query: 18 TSFSTNASILGDIK---KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74 T+ ++A +K K+ + ++ F + ++ G DVD ++ + Sbjct: 246 TTSDSDADTSEMVKVEPKKDVYRIASDSAFAPFEFQNEDNEYVGIDVDLMNR-AAELQG- 303 Query: 75 PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK- 133 I++ + AL Q D + T R F + G + + Sbjct: 304 -FNIEFNFIGFSGALQALDGNQADGMIAGMTITDER--RQSYDFSDSYFESGIQIAVKEG 360 Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 I+S L G ++ + GT + L + + ++ +++ AA + DA Sbjct: 361 NDSINSYEDLDGKTVGAKVGTESADFLIANEEKYGYS--IKYYDAADQLYAAVNGGQIDA 418 Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAE 252 D + + V + S A+ + + E + + M Sbjct: 419 MMDDYPVIGYAISQGQK---LVTPIEKESGGQYGFAVKKGQNPELIQMFNEALKEMKRTG 475 Query: 253 ELG 255 E Sbjct: 476 EYD 478 >gi|325978626|ref|YP_004288342.1| amino acid ABC transporter amino acid-binding/permease [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178554|emb|CBZ48598.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 745 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 74/222 (33%), Gaps = 11/222 (4%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 K +++ F +G+++G DV+ +A++ + ++ A+Q+ Sbjct: 289 TYKIVMDSSFAPFEYQNDSGEYEGIDVELIKAIAEQQGFN---VEISNPGFDAALNAVQA 345 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 Q D + T R+ F Y + + S S L G ++ + GT Sbjct: 346 GQADAVMAGMSITDARKEI--FDFSDAYYTSNILLAVKSGSSVKSYSDLKGLTVGAKNGT 403 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 ++ L+++ + F+ + + + DA D L + + Sbjct: 404 SSYTWLSEHADEYGY--TLKAFDEASTMYDSLNSGSIDALMDDE---AVLLYAIQQGRDF 458 Query: 215 VILPDIISKSPLAPAIIQ-GDTEWYNIVSWTHYAMVTAEELG 255 A+ + + E + + A+V + E Sbjct: 459 ETPIAGEKSGEYGFAVSKGSNPELIEMFNNGLAALVESGEYD 500 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 66/211 (31%), Gaps = 18/211 (8%) Query: 1 MYKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59 M +L + +FF A + +T F ++ +KG Sbjct: 1 MKHKLKALMLAIFSVFFVFGVKAQADT---------ISIVSDTAYAPFEFKDSDQTYKGI 51 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 DVD + ++ D + A+QS Q D L T T R+ F Sbjct: 52 DVDIIKEVAEREGWDYEQ---TYPGFDAAVNAVQSGQADALMAGTTVTDARKKV--FTFS 106 Query: 120 PITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 Y IS SQL G ++ V+ GT + L ++ + F+ Sbjct: 107 DTYYDTSIVVYTKSGNTAISKYSQLKGKTVGVKNGTAAQTWLDEHADKYGY--TVKTFDT 164 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTND 209 + ++ + + DA D + Sbjct: 165 SDLMNNSLDSGSIDAAMDDTPVVQYAISQGK 195 >gi|33597553|ref|NP_885196.1| glutamine ABC transporter periplasmic protein [Bordetella parapertussis 12822] gi|33601952|ref|NP_889512.1| glutamine ABC transporter periplasmic protein [Bordetella bronchiseptica RB50] gi|33573981|emb|CAE38300.1| glutamine-binding periplasmic protein precursor [Bordetella parapertussis] gi|33576390|emb|CAE33468.1| glutamine-binding periplasmic protein precursor [Bordetella bronchiseptica RB50] Length = 250 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 80/246 (32%), Gaps = 18/246 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K ++L + AS L +T V F + N + GFD Sbjct: 1 MIKAKVAAVLIGASAALLGAVSTASAQDK-----ELVVATDTAFVPFEFKQGN-TYTGFD 54 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D A++ + K + P++ LQ+K ID + + F Sbjct: 55 IDLWAAIAKEL---NLKYKLQPMDFNGIIPGLQTKNIDAALAGITI--RDDRKKVIDFSD 109 Query: 121 ITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G + K I LSG S+ V+ GT T D+ K+ +F + Sbjct: 110 PYYESGLAILVSEKNDSIKEAKDLSGKSVAVKTGTATV----DFMKSQVPDAKLKLFPNI 165 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R DA D + T + ++ + S A +G +E Sbjct: 166 DNAYLELATGRVDAAVHDTPNVQYYANTAGKGRV-KVVGTVKSGDFYGIAFPKG-SELVP 223 Query: 240 IVSWTH 245 V+ Sbjct: 224 QVNKAL 229 >gi|312171872|emb|CBX80129.1| glutamine ABC transport system, periplasmic component [Erwinia amylovora ATCC BAA-2158] Length = 249 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 73/214 (34%), Gaps = 12/214 (5%) Query: 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93 L +T V F + G + GFD+D A++ + + P++ ALQ Sbjct: 26 KKLVVATDTAFVPFEFKQG-GQYVGFDIDLWDAIAKQLNMEY---TLKPMDFSGIIPALQ 81 Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQA 152 ++ ID+ T R+ +AF Y G ++ + + L+G + V++ Sbjct: 82 TRNIDLALAGITITDERKK--AIAFSDGYYKSGLLVMVKANNDAVKGIEDLNGKVVAVKS 139 Query: 153 GTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS 212 GT + + K F ++ R DA D + T + Sbjct: 140 GTGSVDYAKQHIKYK----DLRQFPNIDNAYMELGTSRADAVLHDTPNILYFINTAGKG- 194 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 + + + I A +G + V+ Sbjct: 195 QFKAVGNSIEAQQYGIAFPKGSDDLREKVNGALK 228 >gi|325964295|ref|YP_004242201.1| amino acid ABC transporter substrate-binding protein, PAAT family [Arthrobacter phenanthrenivorans Sphe3] gi|323470382|gb|ADX74067.1| amino acid ABC transporter substrate-binding protein, PAAT family [Arthrobacter phenanthrenivorans Sphe3] Length = 267 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 53/242 (21%), Positives = 83/242 (34%), Gaps = 21/242 (8%) Query: 10 LCLIILFFTSFSTNASILG------DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63 + L T+ +S + G L + F + +G GFDVD Sbjct: 19 FAVGALTLTACGGGSSTPAASEGGIQLINAGKLTVCSDIPYEPFEF-EKDGQTVGFDVDI 77 Query: 64 CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123 + L+ F I A E AL Q D+ + T R+ + F Sbjct: 78 AKELAKD-FGAELSIVDSSFEAIETGTALT--QCDLGISSISITDTRKSVM--DFSTPYL 132 Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183 D + + GISS+ G + VQ TT ADY + + FE + Sbjct: 133 DDDLALVASEDSGISSLDDAKGKKVGVQQATTG----ADYAEEQGIDAQ--QFEDTGLLV 186 Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243 A +A DA G+ S L D P + + + L ++ +G+T V+ Sbjct: 187 QALQAGTIDAALGNQSVL--GYAIKDNPK-FKSVEEFATGEQLGISVKKGNTAMLEKVNA 243 Query: 244 TH 245 T Sbjct: 244 TL 245 >gi|322805717|emb|CBZ03282.1| cystine ABC transporter, periplasmic cystine-binding protein FliY [Clostridium botulinum H04402 065] Length = 272 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 71/202 (35%), Gaps = 16/202 (7%) Query: 1 MYKD----FFVSILCLIILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVK 51 M K VS L +IIL A+ + K + G + + + Sbjct: 1 MKKKKLSLILVSALAVIILLAGCGKEKATSTEEQNTGNSKSEKKIIVGTSPDYYPWCYTE 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 A G +GF++D + D I++ F L + QID ++ T R Sbjct: 61 A-GKLQGFEIDVWNEIGKKAGYD---IEFKQSKFSGLFGMLDAGQIDTVAHQISTTEERR 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F + G F+++K K I S+ L G + G E TL + + Sbjct: 117 K--KYDFTETYAYSGYSFVVNKDKDIKSLEDLKGKKVGCTLGGNGEKTLKKLNEEKGLNI 174 Query: 172 HPIVFERVEEIDAAYRAHRCDA 193 + +++ ++ R DA Sbjct: 175 KVLTYDQTP-MEKDVEIGRLDA 195 >gi|294673059|ref|YP_003573675.1| cyclohexadienyl dehydratase [Prevotella ruminicola 23] gi|294472731|gb|ADE82120.1| cyclohexadienyl dehydratase [Prevotella ruminicola 23] Length = 274 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 36/259 (13%), Positives = 86/259 (33%), Gaps = 21/259 (8%) Query: 1 MYKDFFVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFAE 49 M K + + +++ SF++ N + I++RG + G Sbjct: 1 MRKFILLFLSAVLLGSMVSFASCTVGKDNTIIVNQPTINRIQERGTILIGTTGDYRPLTF 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ--IDILSRNTDWT 107 +A+G + GF ++ ++ + + IQ++P + + S D+ T Sbjct: 61 READGTYWGFGIEVAGQIAKRLGVN---IQFVPTSWPTLSTDVTSNPQAFDLAIGGITIT 117 Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167 R+ ++ + +G+ + +L+ L + F Sbjct: 118 DARKQTMLM--SDGYLANGKTILCRA-SEADRYQKLADIDKPDVRVMVNPGGLNEKFANQ 174 Query: 168 NMKYHPIVFERVEEIDAAYRA-HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226 N+ + I+ E + A + D +I+ T+ R +L + + Sbjct: 175 NLTHATIIVHDKNEEIPSLIAEGQADVMITEITEAPYYIQTDTR-LAAPLLNAPFTHGEI 233 Query: 227 APAIIQGDTEWYNIVSWTH 245 + QG + +V+ Sbjct: 234 GVLMRQGQDDLLQLVNDVI 252 >gi|261838313|gb|ACX98079.1| amino acid ABC transporter, periplasmic binding protein [Helicobacter pylori 51] Length = 258 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 32/250 (12%), Positives = 76/250 (30%), Gaps = 13/250 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ +L + FF F +S+ + + + G F G G+D Sbjct: 1 MKKVLFLFLLVIS--FFGGFLNASSLYERLVNKETISVGTEGIYPPFTYHNKEGKLTGYD 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R L+ + I++ + L+S + D+++ + T ++ Sbjct: 59 VEVARELAKELGVK---IKFHETSWDMMLTGLKSGRFDMVANQVNLT-TKKRQATFDKSL 114 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G ++ K I + + G +T A + + + Sbjct: 115 PYSYSGTIMLVRKDENRIKDIKDIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSM 168 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R D A+ T+ + + I + + Sbjct: 169 VQALLLVAQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALE 228 Query: 240 IVSWTHYAMV 249 +++ ++ Sbjct: 229 LINQAMQRLI 238 >gi|241762904|ref|ZP_04760967.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gi|241368079|gb|EER62284.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 278 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 92/244 (37%), Gaps = 16/244 (6%) Query: 21 STNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + + L IK+RG + G+ F + N G++ + RA++ + + +Q Sbjct: 25 AHADATLDKIKQRGKVTIGVLVNGGPFGSIDPANQQLVGWNPELARAVAKGLGAEAELVQ 84 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + R LQ+ ++D+L + + R +LG A P G + K GIS Sbjct: 85 ---VQTATRVQFLQAGKVDLLIASMELNPDRAETLGYAPTPFYRVGGTAAV-RKDSGISK 140 Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 L G +C+ G++ L A++ F+ + A + C A D + Sbjct: 141 WDDLRGKPVCISQGSSFAKPL-----ANDYGAQVQGFKSSSDSLLALKGGTCVAAVHDST 195 Query: 200 ALYALKLTNDRPSEHV-ILPDIISKSPLAPAIIQGDTEWYNIVSWTHY-----AMVTAEE 253 ++ L +N S++ + I +P +G+ + V + A E Sbjct: 196 LIHPLLRSNPEWSQYSAPIATEILPAPSVVWTRKGEADTIAAVDKVVQDWHRTGWLIATE 255 Query: 254 LGIT 257 + Sbjct: 256 KRVG 259 >gi|238892648|ref|YP_002917382.1| putative arginine-binding periplasmic protein [Klebsiella pneumoniae NTUH-K2044] gi|238544964|dbj|BAH61315.1| putative arginine-binding periplasmic protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 243 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 74/219 (33%), Gaps = 11/219 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G T F GFD+D AL + ++ Q+ AL+ Sbjct: 22 TLHFGTTTANPPFVTANGKNQPVGFDIDLAHALCQQM---QAQCQFTAQRFDTLIPALRF 78 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K+ D + + +RE + F G ++ K S + L + V GT Sbjct: 79 KKFDAVIAGMEVIPMREKQVA--FSRPYRQALSGVVLVNKDVAHSFADLKAKKVGVVKGT 136 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP--S 212 + L D KA + ++ V AA +A + GD + L A + N Sbjct: 137 LHQRYLRDKQKA----VQAVPYDDVASALAALKAGQITGVMGDFATLDAWQQENPDYAIM 192 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 + A A+ + D E N ++ A++ Sbjct: 193 DERATDPAYYGKQYAIAVRKDDPELLNAINDALAAVMAT 231 >gi|157369069|ref|YP_001477058.1| extracellular solute-binding protein [Serratia proteamaculans 568] gi|157320833|gb|ABV39930.1| extracellular solute-binding protein family 3 [Serratia proteamaculans 568] Length = 256 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 81/250 (32%), Gaps = 16/250 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + CL S G F ++ +GFD Sbjct: 1 MLKRIILIGACLAATLSASALAAEPTY---------VVGSGGTYRPFEFENSSKQLEGFD 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D +A++ A + +++ + + F L S DI+ T R+ + F Sbjct: 52 IDIIKAVAKA---EGFQVKLVNTPWEGIFATLNSGDRDIIISGITITDKRKQM--VDFSA 106 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + Q ++ K ++S++ L + V +T ++ ++D + F+ Sbjct: 107 PYFPAEQTIVVPKDSQVNSIAALKALKVGVVNSSTGDIVVSDVLGKN--STAIKRFDNTP 164 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + A GD+ T+ ++ + A+ +G+ E Sbjct: 165 LLLQELYEDGIGAAVGDVGVAKFYIKTHPEKEFKLVSDAKFERQYFGIAVAKGNDELRGK 224 Query: 241 VSWTHYAMVT 250 ++ ++ Sbjct: 225 INAGLKKIIA 234 >gi|307300618|ref|ZP_07580393.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] gi|306904152|gb|EFN34737.1| extracellular solute-binding protein family 3 [Sinorhizobium meliloti BL225C] Length = 296 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 74/230 (32%), Gaps = 17/230 (7%) Query: 17 FTSFSTNASILGDI-----KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 T+ + +A DI + G +K + F V G+ GF+VD A++ + Sbjct: 25 LTTGAVHAQTAADILPQIYRDAGVIKLVTDAKYPPFQSVNDAGEIVGFEVDLWNAIADRL 84 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI-TYFDGQGFI 130 K+ ++ +Q+ + DI R+ ++F + Sbjct: 85 ---NVKVDVTSVSFDSLIPGVQAGRWDIAMEGITDNAERQKV--VSFVDYGYTTSSAYVL 139 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLAD-----YFKAHNMKYHPIVFERVEEIDAA 185 K I L G Q+GT +A A K F E + Sbjct: 140 EQKGSEIKDHLGLCGLKGSAQSGTEWVGMIAKEIGDACVAAGKDKPSVSEFGTSEATLLS 199 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + R D + ++ P + + + I+ + P A + +T Sbjct: 200 LYSGRSDFVLTSAALAGEIQKVAPHPVKVIPMQ-ILPRMPSGIAFRKDET 248 >gi|326804125|ref|YP_004321943.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] gi|326650324|gb|AEA00507.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] Length = 505 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 83/271 (30%), Gaps = 37/271 (13%) Query: 1 MYKD---FFVSILCLIILFF------------TSFSTNASILGDIKKRGFLKCGINTGLV 45 M K F +L L L + S+L IK RG L+ G++ Sbjct: 4 MKKLSHCFLAVLLMLTTLSGLLAPQVYGEEDKGQAPSENSLLQSIKDRGELRMGVSPDYP 63 Query: 46 GFAE---VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSR 102 F G D++ + ++ + + + + ++++ IDI+ Sbjct: 64 PFEFITMKDGQQTVAGADIELGQKIADDLGVKLNVVT---MEFSSLLSSMEAGNIDIIIS 120 Query: 103 NTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI---SSVSQLSGASICVQAGTTTELT 159 +T R + F D Q I+ K S ++ Q G+ E Sbjct: 121 GMGYTEERAK--SVDFSDGYQNDEQAIIIRKDDAEKIHDKDSFTPDMTVGYQQGSIQEGL 178 Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE----HV 215 + +++ ++ +A + D D A ++ E H Sbjct: 179 ANEQMPHVGKH----AMQQLPDLISALLTGQIDGVIIDSGVGGAHVRAHEDALEMINGHF 234 Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 L D SK + + + ++ + Sbjct: 235 KLEDDNSKR---VVMPKNQPDLQAAINQSVQ 262 >gi|325674218|ref|ZP_08153907.1| amino acid ABC superfamily ATP binding cassette transporter, substrate-binding protein [Rhodococcus equi ATCC 33707] gi|325554898|gb|EGD24571.1| amino acid ABC superfamily ATP binding cassette transporter, substrate-binding protein [Rhodococcus equi ATCC 33707] Length = 298 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 77/254 (30%), Gaps = 21/254 (8%) Query: 21 STNASILG-DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79 + A L D+ G L+ G N +G GFDVD A+ + + + Sbjct: 45 AAIADQLPPDVAASGELRIGTNPPYAPNEFKDESGAIVGFDVDLMEAVGAVLG---LTLD 101 Query: 80 YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139 + + A+Q+ +D+ + TL RE + F Y G + I Sbjct: 102 LKQTDFDKIIPAVQAGTLDLGMSSFTDTLEREK--SVDFV-TYYSAGVQWAQRAGDDI-D 157 Query: 140 VSQLSGASICVQAGTTTE-----LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 G + VQ T + A A I ++ +++ A R DA Sbjct: 158 PDDACGLRVGVQTTTIEDIDEVPAKSAACVTAGKPPIRKIKYDSQDDVANALILGRVDAL 217 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD---TEWYNIVSWTHYA---M 248 + D V + SP + +G V + Sbjct: 218 SADSPVTA--YAIKRSDGRMVPAGGVYDASPYGWVVAKGSPLAPVLQQAVQYLIDGGQYQ 275 Query: 249 VTAEELGITQKNIN 262 AE G+ I+ Sbjct: 276 AIAEAWGVEAGMID 289 >gi|288960749|ref|YP_003451089.1| polar amino acid transport system substrate-binding protein [Azospirillum sp. B510] gi|288913057|dbj|BAI74545.1| polar amino acid transport system substrate-binding protein [Azospirillum sp. B510] Length = 282 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 77/248 (31%), Gaps = 11/248 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+K + L++ + + A L D+KK G F + N ++KG D Sbjct: 11 MFKTALLGA-TLLVAGAAAGTAMADTLADVKKAGVFTVATEMQFPPFDFL-ENNEYKGVD 68 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D ++ + +Y+ L L++K+ D++ T R +F Sbjct: 69 KDLFDEVAKELGVKA---KYIDLPWTSVLPGLEAKKFDLVIAPVTITKER--MKRYSFTV 123 Query: 121 ITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + I+ ++G + GT+ + ++ + + Sbjct: 124 PISEATAALMKRADDKTITKPEDIAGKKVGGGKGTSQLAQVKEFGQTLPTPPDVREYVDS 183 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII--QGDTEW 237 + A A R DA + L + V+LP S + D Sbjct: 184 NQSYADLAAGRVDASVNSLPNLNFAAAQRKD-TFAVVLPPFGKPSYFSWVGRPGGDDKSL 242 Query: 238 YNIVSWTH 245 V+ Sbjct: 243 IEAVNAAL 250 >gi|15645556|ref|NP_207732.1| amino acid ABC transporter, periplasmic binding protein (yckK) [Helicobacter pylori 26695] gi|2314078|gb|AAD07985.1| amino acid ABC transporter, periplasmic binding protein (yckK) [Helicobacter pylori 26695] Length = 256 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 32/251 (12%), Positives = 74/251 (29%), Gaps = 15/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L+I FF F +S+ + + + G F G G+D Sbjct: 1 MKKVLFL----LVISFFGGFLNASSLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD-WTLLREISLGLAFR 119 V+ R L+ + I++ + L+S + D+++ T R+ + + Sbjct: 57 VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLATKKRQAAFDKSLP 113 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + I + + G +T A + + + Sbjct: 114 YSYSGTIM-LVRKDENRIKDIKDIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSM 166 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R D A+ T+ + + I + + Sbjct: 167 AQALLLVAQKRADLTLNSSLAILNYLNTHKDNPFKIAWESKEKDGGASFVINKHQEKALE 226 Query: 240 IVSWTHYAMVT 250 +++ ++ Sbjct: 227 LINQAMQRLIN 237 >gi|160901197|ref|YP_001566779.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160366781|gb|ABX38394.1| extracellular solute-binding protein family 3 [Delftia acidovorans SPH-1] Length = 308 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 55/231 (23%), Positives = 81/231 (35%), Gaps = 15/231 (6%) Query: 23 NASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYL 81 + L IK+RG L GI+ F + G G+ + ++ + + Sbjct: 27 ADATLDKIKQRGKLSVGIDGASPPFGVLDPATGKTGGYQTELAADIARRLGVPLETVP-- 84 Query: 82 PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141 + A R LQS ++D+L N WT R L A P G G ++ K GI Sbjct: 85 -VTASTRVQFLQSGKVDLLIANIQWTQERSEILSFAPTP-YDLIGGGALVAKASGIKRWE 142 Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201 L G CV G+ LA+ + A + E A + C A AL Sbjct: 143 DLRGKVACVSQGSNFAKPLAESYGA-----VVKGLRGIPESLLALKGGTCAASVHIQPAL 197 Query: 202 YALKLTNDRPSEHV----ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 Y KLT +E D + SP +G+T+ V Sbjct: 198 Y-EKLTGPNAAEWKDFELGTQDQLIPSPTVVWTRRGETDTQAFVDKAIQDW 247 >gi|78046209|ref|YP_362384.1| putative carboxycyclohexadienyl dehydratase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034639|emb|CAJ22284.1| putative carboxycyclohexadienyl dehydratase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 266 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 82/255 (32%), Gaps = 8/255 (3%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +++ L+ +T AS L + + G L+ ++ ++ +G ++G D Sbjct: 10 MRHRICLAL--LLSCGTAHAATPASRLDAVLQSGVLRVCTTGDYRPYSLLRGDGQFEGSD 67 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++L++++ ++++ + + + L + + DI TL R+ + Sbjct: 68 IDLVQSLAASL---DARVRLVRTSWPQLMPDLLADRCDIAVGGISVTLQRQRQASFSAVL 124 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + S+ QL+ + + + + +F Sbjct: 125 DVDGKIPLVRCADQARYRSLEQLNRPEVRLIEPPGGTN--EAFAHRQLPQATLRLFADNT 182 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I AHR D D S + + A + + D W Sbjct: 183 TIFQELLAHRADVMITDASEALYQQARLPGLCAIAPEQPLQYSE-KAFLLPRDDHAWKAY 241 Query: 241 VSWTHYAMVTAEELG 255 V + + + Sbjct: 242 VDQWLHLSKASGDYQ 256 >gi|283457454|ref|YP_003362031.1| amino acid ABC transporter/signal transduction system periplasmic protein [Rothia mucilaginosa DY-18] gi|283133446|dbj|BAI64211.1| ABC-type amino acid transport/signal transduction system, periplasmic component [Rothia mucilaginosa DY-18] Length = 279 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 75/224 (33%), Gaps = 11/224 (4%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 K G L NT F + NG G D D A++S + + Sbjct: 45 KSGTLSVCTNTPYKPFEY-EENGTIVGLDADIANAIASDLGVKAQLTSISF-EGLDSGTG 102 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 L + Q DI T R+ + F + + D ++ K I+S + L G ++ Q Sbjct: 103 LATGQCDIALAGIGVTDERKS--KMEFTTVYFDDNLAILVPKGSSITSAADLKGVAVGAQ 160 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 T+ E + I +E + +A + + A ++S + + Sbjct: 161 QATSGETYAKE------NGAEVIQYEDTSLMFSALKTGQVKAVAANLSVVSEALTNDPN- 213 Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 S + D + +A A+ + + T + EL Sbjct: 214 SFKIAYQDSENTEQIAAAVSSNNKALLAKANSTITKLKENGELD 257 >gi|257869222|ref|ZP_05648875.1| amino acid ABC transporter [Enterococcus gallinarum EG2] gi|257803386|gb|EEV32208.1| amino acid ABC transporter [Enterococcus gallinarum EG2] Length = 718 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 37/241 (15%), Positives = 74/241 (30%), Gaps = 23/241 (9%) Query: 1 MYKDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56 M + + L +I F +F+ + A K G + F ++ Sbjct: 1 MKRKYMFCALFSVIFCFFAFANKPVSAAET--------TYKIGTDLTFAPFEFQNEKNEY 52 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G D+D A++ + PL +QS Q+D + T R+ + Sbjct: 53 VGIDIDLLNAIAED---QGFAVDLRPLGFDSSLQGVQSNQLDGMIAGMSITDERKET--F 107 Query: 117 AFRPITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175 F + G + K + I + + L ++ + GT + L K + Sbjct: 108 DFSDPYFDSGIQMAVAKDNQDIKTYADLKDKTVGAKVGTESARFLETNQKKYGYS--IKN 165 Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 ++ + A R A D L ++ + + A+ +G Sbjct: 166 YDDASGLYGAVRNGTVVAIFDDYPV---LGYAISNGEAMKLVGEPEKGASYGFAVKKGQN 222 Query: 236 E 236 Sbjct: 223 S 223 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 80/253 (31%), Gaps = 19/253 (7%) Query: 9 ILCLIILFFTSFSTNASILGDIK-KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67 I+ I S S AS + ++ K+ + ++ F + ++ G DVD Sbjct: 245 IIATYIASSESTSDEASEMVKVEPKKDVYRISSDSAFAPFEFQNEDNEYVGIDVDLLTR- 303 Query: 68 SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127 ++ + I++ + AL Q D + R+ F + G Sbjct: 304 AAEMQG--FNIEFNFIGFSGALQALDGNQADGMIAGMSINDERKK--AYDFSDSYFESGI 359 Query: 128 GFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 + + I S L G ++ + GT + L + + ++ +++ AA Sbjct: 360 QIAVKEGNDSIKSYEDLEGKTVGAKVGTESADFLIENEDKYGY--TIKYYDAADQLYAAV 417 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS---PLAPAIIQ-GDTEWYNIVS 242 + DA D + + L I K A+ + + E + + Sbjct: 418 SGGQIDAMMDDYPVIGYAISQGQK------LSTPIEKEVGGQYGFAVKKGQNPELIQMFN 471 Query: 243 WTHYAMVTAEELG 255 M E Sbjct: 472 EALKEMKRTGEYD 484 >gi|19704135|ref|NP_603697.1| amino acid-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714345|gb|AAL94996.1| Amino acid-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 230 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 76/225 (33%), Gaps = 15/225 (6%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 K + G N F + GFD+D A+S + + + A Sbjct: 12 KSNVVYVGTNAEFAPFEYLD-KNKIVGFDIDLLDAISKETG---LEFKIQDMAFDGLLPA 67 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICV 150 LQ+K++D++ T R+ ++ F + Q I + K + S LSG + V Sbjct: 68 LQTKKVDMVIAGMTATPERQKTVA--FSKPYFKAKQVVITKGENKSLKSFKDLSGKKVGV 125 Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210 G T + +++ F A ++ DA D A K T + Sbjct: 126 MLGFTGDTVVSEI-----KGVKIERFNAAYAAILALSQNKIDAVVLDSE--PAKKYTANN 178 Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255 + VI + A A + D E N V+ + E Sbjct: 179 -KQFVIANIPAEEEDYAIAFRKNDKELINKVNVALDKIKANGEYD 222 >gi|297579918|ref|ZP_06941845.1| amino acid ABC transporter [Vibrio cholerae RC385] gi|297535564|gb|EFH74398.1| amino acid ABC transporter [Vibrio cholerae RC385] Length = 278 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 84/247 (34%), Gaps = 20/247 (8%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 + + N L IK+RG L+ G++T V +A G+ GF++D + L++ Sbjct: 24 AFTLPAVANNTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW 82 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++++P AL +K+ D++ T R S + F G K Sbjct: 83 ---QVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAASK 137 Query: 134 K--KGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 K +G S + + I + G T + F + F+ + Sbjct: 138 KLAEGFSKLEDFNKRDVKIAARRGAFTVQVARETFPKA----SVLQFDDDAQAFQEVING 193 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWT 244 A + + + + +SK A A+ G+ + I T Sbjct: 194 NAHAVIASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKKAFFDQWIADRT 252 Query: 245 HYAMVTA 251 + A Sbjct: 253 ADGWLQA 259 >gi|296332696|ref|ZP_06875156.1| putative ABC transporter (binding lipoprotein) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673040|ref|YP_003864712.1| putative ABC transporter binding lipoprotein [Bacillus subtilis subsp. spizizenii str. W23] gi|296149976|gb|EFG90865.1| putative ABC transporter (binding lipoprotein) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411284|gb|ADM36403.1| putative ABC transporter (binding lipoprotein) [Bacillus subtilis subsp. spizizenii str. W23] Length = 283 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 33/255 (12%), Positives = 70/255 (27%), Gaps = 16/255 (6%) Query: 3 KDFFVSILCLIILFFTSF-----STNASI-LGDIKKRGFLKCGINTGLVGFAEVKAN--- 53 K S L + + + IK +G + + L + + Sbjct: 4 KAVIFSFTMAFFLILAACSGKNEADSKDTGWEQIKDKGKIVVATSGTLYPTSYHDTDSGS 63 Query: 54 GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 G++V+ R + + K+++ + A+ S Q+D + + D T RE Sbjct: 64 DKLTGYEVEVVREAAKRLG---LKVEFKEMGIDGMLTAVNSGQVDAAANDIDVTKDREKK 120 Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + + GI ++ L G A T D + + + Sbjct: 121 FAFSTPYKYSYGTAIVRKDDLSGIKTLKDLKGKKAAGAATTVYM----DVARKYGAQEVI 176 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 E+ R D D + + + A + + Sbjct: 177 YDNATNEQYLKDVANGRTDVILNDYYLQTLALAAFPDLNITIHPDIKYMPNKQALVMKKS 236 Query: 234 DTEWYNIVSWTHYAM 248 + ++ T M Sbjct: 237 NAALQKKMNETLKEM 251 >gi|326315179|ref|YP_004232851.1| family 3 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372015|gb|ADX44284.1| extracellular solute-binding protein family 3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 255 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 92/252 (36%), Gaps = 16/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M ++ + +FS A + I+K G + F K + GF+ Sbjct: 1 MK--ILKTMATAAVALCAAFSAQARPIDAIQKDGKIIIATEGQFAPFNYFKGT-ELTGFE 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ ++ + K+++ L L + D+ + T R S + F Sbjct: 58 VEVANLVAKKM---NLKVEWKTLGFDALLTGLAQDRWDVAIASHGVTEER--SKAVTFAT 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 ++ G ++ I + L+G + VQ GT+ + F Sbjct: 113 P-HYCSGGMVISMDPAIRAGKDLAGKVVAVQTGTSYLENVKKVPGVK----DVKNFPTDV 167 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + +A + R DA+ D A ++ P + L D++ +APA+ +G+T + Sbjct: 168 DARSALTSKRVDAWVTDK--FVAKEVAAKNPKAGLKLGDMLFIEKIAPAVAKGNTGLADA 225 Query: 241 VSWTHYAMVTAE 252 + +A + A+ Sbjct: 226 WNKA-FAEILAD 236 >gi|251781795|ref|YP_002996097.1| ABC transporter substrate-binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390424|dbj|BAH80883.1| ABC transporter substrate-binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 280 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 78/252 (30%), Gaps = 17/252 (6%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG------FLKCGINTGLVGFAEVKANG 54 M K ++ + + + + S + G + F+ + G Sbjct: 1 MIKKQYLGMATITLASTLVLAACGSS--KTAESGNQGSSKEVLFATVGTTAPFSY-EKGG 57 Query: 55 DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114 G+D++ +A+ D K+ + F L S + + N +T R Sbjct: 58 QLTGYDIEVAKAVFK--GSDDYKVSFKKTEWSSIFTGLDSGKYQMGGNNISFTKERSA-- 113 Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F ++ K I S + G + V GTT+ L D+ K H+ + Sbjct: 114 KYLFSYPIGSTPSVLVVPKDSDIKSFDDIQGHTTQVVQGTTSVAQLEDFNKKHSDNPVTL 173 Query: 175 VFERVE--EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP-LAPAII 231 F ++ + D D + A + N + ++ P + Sbjct: 174 KFTNENITQMLTNLSEGKADFKIFDAPTVNA-IIKNQGLDNLKTIELTSTEQPFIYFIFS 232 Query: 232 QGDTEWYNIVSW 243 Q + + V+ Sbjct: 233 QDQEKLQSFVNK 244 >gi|304415311|ref|ZP_07395996.1| permease component of arginine ABC transporter [Candidatus Regiella insecticola LSR1] gi|304282829|gb|EFL91307.1| permease component of arginine ABC transporter [Candidatus Regiella insecticola LSR1] Length = 509 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 83/241 (34%), Gaps = 28/241 (11%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L I + L ++ + F V N + +GFD Sbjct: 1 MKKLIITVFLISISFSIYA-------LD------TVRFAMEASYPPFEFVGKNNEIQGFD 47 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD AL + K + +L KQ+D + D T R + F Sbjct: 48 VDLATALCKEM---QVKCTFTNQAFDSLIPSLIFKQVDAVISGMDITAERLKQVA--FTE 102 Query: 121 ITYFDGQGFIMHK----KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 Y + I K K+ ++ ++ L G + +Q G+T + L + + + + Sbjct: 103 PYYENSALLIAEKSRAEKEKLTDLAALKGKRVGLQNGSTHQRFLQ----KKHPEIMALPY 158 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE--HVILPDIISKSPLAPAIIQGD 234 ++ + ++ R DA GD + + ND ++ I L A+ Q + Sbjct: 159 SSYQDAVSDLKSGRLDAVFGDTAVINEWLRNNDNLTQIGEKITDADYFNQGLGIAVRQEN 218 Query: 235 T 235 T Sbjct: 219 T 219 >gi|254440571|ref|ZP_05054065.1| Bacterial extracellular solute-binding protein, family 3 [Octadecabacter antarcticus 307] gi|198256017|gb|EDY80331.1| Bacterial extracellular solute-binding protein, family 3 [Octadecabacter antarcticus 307] Length = 264 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 86/244 (35%), Gaps = 12/244 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDV 61 K F + +I +T S L +I G L+ G A + G+D+ Sbjct: 7 KFFKIIATAVIFASGAVQATAQSALNEILSEGVLRVGTTGDWNPMTMRDIATNTYVGYDI 66 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D L++ + + I+++P + K + S Q ++ + + R + G + Sbjct: 67 DVMTMLANDLGVE---IEFVPTDWKTLVAGVTSGQYH-ITGSASVSPARAKAAGYSDSYF 122 Query: 122 TYFDGQGFIMHKKKGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + + ++ L+ G S+ GTT E + YF A + Sbjct: 123 SLVTVPLTLRENADRFTNWDDLNVEGVSVAATLGTTQEAQVKQYFPAATHRIVEAPARDF 182 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 +E+ + R DA L + + + S +P+A + Q D W N Sbjct: 183 QEVL----SGRADASITSNIEAATLVEQYEN-LMIIPVDAGRSPTPVAMLLPQADQVWIN 237 Query: 240 IVSW 243 V+ Sbjct: 238 YVNT 241 >gi|108563348|ref|YP_627664.1| amino acid ABC transporter, periplasmic binding protein [Helicobacter pylori HPAG1] gi|107837121|gb|ABF84990.1| amino acid ABC transporter, periplasmic binding protein [Helicobacter pylori HPAG1] Length = 256 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 32/251 (12%), Positives = 74/251 (29%), Gaps = 15/251 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F+ L+I FF F + + + + + G F G G+D Sbjct: 1 MKKVLFL----LVISFFGGFLNASGLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYD 56 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 V+ R L+ + I++ + L+S + D+++ T ++ Sbjct: 57 VEVARELAKELGVK---IKFHETSWDIMLTGLKSGRFDMVANQVSLT-TKKRQAAFDKSL 112 Query: 121 ITYFDGQGFIMHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 + G ++ K I + + G +T A + + + Sbjct: 113 PYSYSGTIMLVRKDENRIKDIKDIKGLRAANTLSSTYGEI------AFKYDAQIVSVDSM 166 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R D A+ T+ + + I + + Sbjct: 167 AQALLLVAQKRADLTLNSSLAILNYLNTHKDNPFKIAWESKEKDGGASFVINKHQEKALE 226 Query: 240 IVSWTHYAMVT 250 +++ ++ Sbjct: 227 LINQAMQRLIN 237 >gi|16263640|ref|NP_436433.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium meliloti 1021] gi|14524351|gb|AAK65845.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium meliloti 1021] Length = 296 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 74/230 (32%), Gaps = 17/230 (7%) Query: 17 FTSFSTNASILGDI-----KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71 T+ + +A DI + G +K + F V G+ GF+VD A++ + Sbjct: 25 LTTGAVHAQTAADILPQIYRDAGVIKLVTDAKYPPFQSVNDAGEIVGFEVDLWNAIADRL 84 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI-TYFDGQGFI 130 K+ ++ +Q+ + DI R+ ++F + Sbjct: 85 ---NVKVDVTSVSFDSLIPGVQAGRWDIAMEGITDNAERQKV--VSFVDYGYTTSSAYVL 139 Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLAD-----YFKAHNMKYHPIVFERVEEIDAA 185 K I L G Q+GT +A A K F E + Sbjct: 140 EQKGSEIKDHLGLCGLKGSAQSGTEWVGMIAKEIGDACVAAGKDKPSVSEFGTSEATLLS 199 Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235 + R D + ++ P + + + I+ + P A + +T Sbjct: 200 LYSGRSDFVLTSAALAGEIQKVAPHPVKVIPMQ-ILPRMPSGIAFRKDET 248 >gi|238789649|ref|ZP_04633432.1| Arginine-binding periplasmic protein 1 [Yersinia frederiksenii ATCC 33641] gi|238722202|gb|EEQ13859.1| Arginine-binding periplasmic protein 1 [Yersinia frederiksenii ATCC 33641] Length = 243 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 80/216 (37%), Gaps = 18/216 (8%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 ++ F + AN +GFD+D AL + ++ + +L+ Sbjct: 22 TIRFAAEATYPPFEFIDANNKMQGFDIDLANALCKEM---QAECTFTNQAFDSLIPSLKF 78 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K+ D + D T R+ + F Y + FI K I+ ++ L G + +Q G+ Sbjct: 79 KRFDAVISGMDITPERQKQVA--FTQPYYENSALFIAEKG-KIADLAALKGKRVGMQNGS 135 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214 T + L + + + ++ + + R DA GD + + + ++ Sbjct: 136 THQKFL----MEKHPEITAVPYDSYQNAILDLKNGRLDAVFGDTAVVNEW---LKQNNQL 188 Query: 215 VILPDIISKSPL-----APAIIQGDTEWYNIVSWTH 245 V + D ++ + A+ Q +TE + Sbjct: 189 VAVGDKVTDANYFGTGLGIAVRQNNTELQGKLDAAL 224 >gi|251782157|ref|YP_002996459.1| arginine-binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390786|dbj|BAH81245.1| arginine-binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 252 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 34/249 (13%), Positives = 69/249 (27%), Gaps = 16/249 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAI 71 + + + IK+ G L ++ F V G D+ +A++ + Sbjct: 1 MAACGKAEKVNRQDSIKQAGKLVVAVSPDYAPFEFKALVNGKDTIVGADIQLAQAIADEL 60 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 ++ P++ +LQ+ + D+ +T R F Y +M Sbjct: 61 GVK---LELSPMSFDNVLSSLQTGKADLAISGLSYTKERAKV--YDFSTPYYETENAILM 115 Query: 132 H--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 K V+ L G + Q G+ E + N + + E +A Sbjct: 116 RAADAKAAKDVTSLEGQKVAAQKGSIEEGLVKSQLPKSN----LVALTAMGEAINELKAG 171 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 + A + + A A+ + V+ Sbjct: 172 QVYAVDLEGPVAAGYLAQHKDLVLASFSLKTTDGDAKAVALPKNSGTLTKTVNKVI--AK 229 Query: 250 TAEELGITQ 258 AE+ Sbjct: 230 LAEDDQYKA 238 >gi|152973035|ref|YP_001338181.1| putative arginine-binding periplasmic protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|262045406|ref|ZP_06018429.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330003308|ref|ZP_08304579.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Klebsiella sp. MS 92-3] gi|150957884|gb|ABR79914.1| putative arginine-binding periplasmic protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|259037235|gb|EEW38483.1| arginine ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328537019|gb|EGF63307.1| arginine ABC transporter, periplasmic arginine-binding protein ArtJ [Klebsiella sp. MS 92-3] Length = 243 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 43/219 (19%), Positives = 74/219 (33%), Gaps = 11/219 (5%) Query: 35 FLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94 L G T F GFD+D AL + ++ Q+ AL+ Sbjct: 22 TLHFGTTTANPPFVTANGKNQPVGFDIDLAHALCQQM---QAQCQFTAQRFDTLIPALRF 78 Query: 95 KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGT 154 K+ D + + +RE + F G ++ K + + L + V GT Sbjct: 79 KKFDAVIAGMEVIPMREKQVA--FSRPYRQALSGVVIVNKDVAHTFADLKAKKVGVVKGT 136 Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP--S 212 + L D KA + ++ V AA +A + GD + L A + N Sbjct: 137 LHQRYLRDKQKA----VQAVPYDDVASALAALKAGQITGVMGDFATLDAWQQENPDYAIM 192 Query: 213 EHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 + A A+ + D E N ++ A++ Sbjct: 193 DERATDPAYYGKQYAIAVRKDDPELLNAINDALAAVMAT 231 >gi|117618389|ref|YP_858704.1| cystine-binding periplasmic protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559796|gb|ABK36744.1| cystine-binding periplasmic protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 252 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 78/250 (31%), Gaps = 21/250 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M + I+L S A +K G++ F VK + +GF+ Sbjct: 1 MTSSIKLVSGAAILLAALSGQAIAQE--------TIKVGMSGKYFPFTFVKQD-KLQGFE 51 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD + ++++ + F L++ ++D +S T R+ AF Sbjct: 52 VDMWNQIGERTGYK---VEFVTASFSGLFGMLETGRVDTISNQITITDERKA--KYAFSQ 106 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +DG ++ K I + L G + V G+ E L N I Sbjct: 107 PYVYDGAQIVVRKGNSTIHGIKDLEGKKVAVNLGSNFEELLR-----KNDPNKKIDIRTY 161 Query: 180 EEID-AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238 + R DA+ D + L + P + P ++ L Sbjct: 162 DSAFEQDVALGRIDAFVMDRVSTAQLIKESKLPLQQAGAPFETIENALPFLKTPEKQALL 221 Query: 239 NIVSWTHYAM 248 V AM Sbjct: 222 KKVDDALTAM 231 >gi|154148143|ref|YP_001406030.1| arginine-binding periplasmic protein 1 [Campylobacter hominis ATCC BAA-381] gi|153804152|gb|ABS51159.1| arginine-binding periplasmic protein 1 [Campylobacter hominis ATCC BAA-381] Length = 246 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 74/220 (33%), Gaps = 19/220 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K F IL +L FT + L G N F + + GFD Sbjct: 1 MKK--FFKILSCFMLIFTFANAKDFTKD------TLIVGTNATYPPFEFLDDKSEVTGFD 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D LS I + ++ AL+S +IDI + T R+ + F Sbjct: 53 FDLMAELSKRIGFKYEVLN---MSFDGLIPALKSGKIDIAAAAMSATPARKK--AVDFSN 107 Query: 121 ITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 YF F+ K I+ + L+G I VQ GT + + E + Sbjct: 108 AYYFTENLFLKCKDSTDITKIDDLNGKKIGVQLGT-----VQEMAAKELNGVDVSASEDI 162 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219 + + + DA D S Y+ N E +PD Sbjct: 163 FVAIMSLKNKKVDAVLVDSSIGYSYLKKNPDLVEFAKVPD 202 >gi|310779362|ref|YP_003967695.1| cyclohexadienyl dehydratase [Ilyobacter polytropus DSM 2926] gi|309748685|gb|ADO83347.1| cyclohexadienyl dehydratase [Ilyobacter polytropus DSM 2926] Length = 252 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 86/252 (34%), Gaps = 19/252 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L+++ F++ S + I + ++ G F D++G+D Sbjct: 1 MKKILLI----LMVVVFSAISFAEGRVDSILRNKKIRVGTTGDYKPFTYYNGK-DYEGYD 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 ++ + ++S I + ++++ K L++ + DI T L Sbjct: 56 IEVAKYIASEIGVE---LEFVSTTWKNLITDLEADKFDIAMGG--ITRRTGRQLKAEISR 110 Query: 121 ITYFDGQGFIMHKKKG----ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 G+ I+ K G + V G T E K+ I + Sbjct: 111 PYLVFGKCPIVRKADEQKYKSLEDIDQPGVKVGVNIGGTNEKFADQNIKSAK----IIRY 166 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 E+ ++ A D + + + + ++KS L I +GD E Sbjct: 167 EKNLDVPVAVMKGEVDVMISETPE-AMHYANEYKELASPMTANPMTKSQLGYLIPKGDNE 225 Query: 237 WYNIVSWTHYAM 248 N++++ M Sbjct: 226 MLNLINFIMDEM 237 >gi|238561050|ref|ZP_00442711.2| polar amino acid uptake abc transporter, paat family, periplasmic amino acid-binding protein [Burkholderia mallei GB8 horse 4] gi|254356367|ref|ZP_04972643.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia mallei 2002721280] gi|148025364|gb|EDK83518.1| polar amino acid uptake ABC transporter, PAAT family, periplasmic amino acid-binding protein [Burkholderia mallei 2002721280] gi|238525443|gb|EEP88871.1| polar amino acid uptake abc transporter, paat family, periplasmic amino acid-binding protein [Burkholderia mallei GB8 horse 4] Length = 318 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 67/223 (30%), Gaps = 15/223 (6%) Query: 25 SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84 +L +K+ G LK + F +G +GFDV + +++ + P Q++ Sbjct: 82 DLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDV--AKEVAARLGVKP---QFVTTE 136 Query: 85 AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK--GISSVSQ 142 LQ+ + D++ T R L F + I + Sbjct: 137 WSGILAGLQAGKFDVIVNQVGITPAR--RQALDFSQPYVYSAAQLIQRADDKHDYGAPGA 194 Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202 L G I V GT AD K + E A R D D L Sbjct: 195 LQGKRIGVTLGT----NFADLAKTLQ-GVDVKTYPGAPEKLRDVAAGRIDVSMDDRLMLP 249 Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 L P ++ + +G+ ++ + Sbjct: 250 YLIKNAHMPLR-PGATINGGETQMGIPFRKGNPKFAKALDDAL 291 >gi|17987305|ref|NP_539939.1| arginine/ornithine-binding periplasmic protein precursor [Brucella melitensis bv. 1 str. 16M] gi|256044619|ref|ZP_05447523.1| arginine/ornithine-binding periplasmic protein precursor [Brucella melitensis bv. 1 str. Rev.1] gi|256113497|ref|ZP_05454331.1| arginine/ornithine-binding periplasmic protein precursor [Brucella melitensis bv. 3 str. Ether] gi|256264046|ref|ZP_05466578.1| extracellular solute-binding protein [Brucella melitensis bv. 2 str. 63/9] gi|260563971|ref|ZP_05834457.1| arginine/ornithine-binding periplasmic protein [Brucella melitensis bv. 1 str. 16M] gi|265991045|ref|ZP_06103602.1| extracellular solute-binding protein family 3 [Brucella melitensis bv. 1 str. Rev.1] gi|265994880|ref|ZP_06107437.1| extracellular solute-binding protein [Brucella melitensis bv. 3 str. Ether] gi|17982985|gb|AAL52203.1| arginine/ornithine-binding periplasmic protein precursor [Brucella melitensis bv. 1 str. 16M] gi|260153987|gb|EEW89079.1| arginine/ornithine-binding periplasmic protein [Brucella melitensis bv. 1 str. 16M] gi|262765993|gb|EEZ11782.1| extracellular solute-binding protein [Brucella melitensis bv. 3 str. Ether] gi|263001829|gb|EEZ14404.1| extracellular solute-binding protein family 3 [Brucella melitensis bv. 1 str. Rev.1] gi|263094232|gb|EEZ18109.1| extracellular solute-binding protein [Brucella melitensis bv. 2 str. 63/9] gi|326408976|gb|ADZ66041.1| Arginine/ornithine-binding periplasmic protein precursor [Brucella melitensis M28] Length = 148 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 57/151 (37%), Gaps = 7/151 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M +++ + + + A+ + + ++ L G F +K +G GFD Sbjct: 1 MRVLKRIAMATSVSALAITVGSMAAGVANAEEPLKLTIGTEGAYPPFNFIKPDGTLSGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD RAL + +K +++ + ALQS + D + T R+ + F Sbjct: 61 VDIARALCDQM---KAKCEFVTQDWDGAIPALQSGKFDAFIASMSITDERKK--QVDFTN 115 Query: 121 ITYFDGQGFIMHKKKGIS--SVSQLSGASIC 149 Y G K I + L+G +I Sbjct: 116 KYYNTPPGIAAPKDTDIKGVTKEDLAGKTIG 146 >gi|293366163|ref|ZP_06612849.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis M23864:W2(grey)] gi|291319685|gb|EFE60045.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis M23864:W2(grey)] Length = 472 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 15/238 (6%) Query: 13 IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSS 69 + + ++++ IK RG L+ G++ + ++ G D++ + ++ Sbjct: 7 LFISPSTYANEDENWTKIKNRGELRVGLSADYAPLEFEKTIHGKTEYAGVDIELAKKIAK 66 Query: 70 AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129 + K++ + + AL++ +IDI+ T R+ + F Sbjct: 67 D---NHLKLKIVNMQFDSLLGALKTGKIDIIISGMTTTPERKK--EVDFTKPYMITNNVM 121 Query: 130 IMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187 ++ K ++ G I Q GT E + R+ E + + Sbjct: 122 MIKKDDAKRYQNIKDFEGKKIAAQKGTDQEKIAQTEIE----DSKISSLNRLPEAILSLK 177 Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 + + + A N + K A+ + + ++ T Sbjct: 178 SGKVAGVVVEKPVGEAYLKQNSE-LTFSKIKFNEEKKQTCIAVPKNSPVLLDKLNQTI 234 >gi|258622432|ref|ZP_05717454.1| Cystine-binding periplasmic protein [Vibrio mimicus VM573] gi|258585132|gb|EEW09859.1| Cystine-binding periplasmic protein [Vibrio mimicus VM573] Length = 278 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 85/242 (35%), Gaps = 20/242 (8%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + +++ L IK+RG L+ G++T V +A G+ GF++D + L++ ++ Sbjct: 29 AVASDTPNLDTIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW---QV 84 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KG 136 +++P AL +K+ D++ T R S + F G KK +G Sbjct: 85 EFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAASKKLAEG 142 Query: 137 ISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 S + + I + G T + F + F+ + A Sbjct: 143 FSKLEDFNKRNVKIAARRGAFTVQVARETFPKA----SVLQFDDDAQAFQEVINGNAHAV 198 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWTHYAMV 249 + + + + +SK A A+ G+ + I T + Sbjct: 199 IASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKKAYFDQWIADRTADGWL 257 Query: 250 TA 251 A Sbjct: 258 QA 259 >gi|91786311|ref|YP_547263.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91695536|gb|ABE42365.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 254 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 73/220 (33%), Gaps = 13/220 (5%) Query: 26 ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85 L +++K G + F + GF+V+ ++ + +++ L Sbjct: 24 SLDEVRKEGKIIIATEGQFAPFNYFQGA-KLSGFEVELAELVAKKMG---VSVEWKALGF 79 Query: 86 KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145 L+ + D++ + T R + F Y G + I + + L+G Sbjct: 80 DALLAGLRQDRWDLVIASHGITEERSR--AVTFADPHYCSGGSIVSL-DPAIRTTADLNG 136 Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205 I VQ G+T + F + + +A + R DA+ D A Sbjct: 137 KVISVQTGSTYMDNVRKLAGVK----DVKNFPQDTDARSALVSRRVDAWVTDK--FVASI 190 Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245 P + L D + +A A+ +G+ + Sbjct: 191 AIAANPGAGMKLGDFVFIERIAAAVGKGNASLAQGYNKAL 230 >gi|296273473|ref|YP_003656104.1| family 3 extracellular solute-binding protein [Arcobacter nitrofigilis DSM 7299] gi|296097647|gb|ADG93597.1| extracellular solute-binding protein family 3 [Arcobacter nitrofigilis DSM 7299] Length = 249 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 102/242 (42%), Gaps = 14/242 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+ SI+ LI+L S+S + +I G+++ G++ + F + +G GFD Sbjct: 1 MHTTIMKSIIILILLVQYSYSKS---FKEILNDGYIRVGVSYDYIPFGFINNDGILDGFD 57 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + + + + +++++ +++ + L ++DIL ++ + + F Sbjct: 58 IDLIKRMMNKL---ELRVKFIEVSSTNKEKMLLDDKLDILFAGMS--KDKQSNKNIIFTK 112 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y D Q +++ K + ++ + + GT F + F + Sbjct: 113 PYYTDEQVILLNSNKNVKTLKDMDNMHVGSLKGTNYLTN----FLKIQPNVLTVSFSQYP 168 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 ++ A + DA T S +A + P+E IL D+I + + A+ + + + Sbjct: 169 QLTKALAYNNIDAVTAGSS--WAKEQVESHPNEFRILSDVICQINYSMALKKSNEDLKEK 226 Query: 241 VS 242 ++ Sbjct: 227 LN 228 >gi|224283186|ref|ZP_03646508.1| solute binding protein of ABC transporter system [Bifidobacterium bifidum NCIMB 41171] Length = 309 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 88/260 (33%), Gaps = 21/260 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF---------LKCGINTGLVGFAEVK 51 M + F + L ++ S + S G + G+ + G Sbjct: 15 MRR--FSAALAAVLWTAGSLTACGSSSSRDDANGVSIRQPEGPTVSIGVASDQPGLGVW- 71 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 NG + GFDVD R ++ A+ +I + P+ + R L+S Q+D++ + T E Sbjct: 72 HNGGYSGFDVDVARYVAKALGYADKQIVFKPVTPRSRVSMLESAQVDMVVSSFGITERHE 131 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + Q ++ I+ + ++G CV AG+ + D ++ Sbjct: 132 S--AVTMTGPYLIVRQDLLVRAADAGDITGIKDMNGRKACVVAGS----DVTDAVRSQAP 185 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 K + + + DA + L L ++ + A Sbjct: 186 KASIEERDDYGQCLTSLLIGDVDAVAAGDAILTGLATVKGNGYV-QVVGAPFGEERYGIA 244 Query: 230 IIQGDTEWYNIVSWTHYAMV 249 + G+T+ + + M+ Sbjct: 245 VKHGNTQLADSIGDILSDMI 264 >gi|222147484|ref|YP_002548441.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] gi|221734474|gb|ACM35437.1| ABC transporter substrate binding protein (amino acid) [Agrobacterium vitis S4] Length = 256 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 85/266 (31%), Gaps = 17/266 (6%) Query: 5 FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64 F +++ ++L + L IK+ G ++ G F+ +G+ G D+ Sbjct: 4 FRTALVTALLLTSSLAHAEDGTLATIKQAGVIRIGTTGDYKPFSYKGGDGELVGADISMG 63 Query: 65 RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124 +AL++ + P ++ + K ++ + D++ R F Sbjct: 64 KALATDLGVKPE---FVMTSWKTMLEDFKAGKFDMVLGGITVNPARAEV--GDFSLSNVK 118 Query: 125 DGQGFIMHKKKGIS----SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 DG+ I+ + + V G T + ++F VF + Sbjct: 119 DGKRPIVRCEDKDRLVTLEAIDQPSVRVIVNPGGTNDKFAHEHFTKA----PIEVFPDNK 174 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 I A++ D D + + + + + A + + D + Sbjct: 175 VIFDQIAANKADVMVTDGVEVDLQSKLHPGVLCPSAVKEPFTHFENAYLLRK-DPAFKAA 233 Query: 241 VSWTHYAMVTAEELGITQKNINQVSK 266 V M A E G + ++ + Sbjct: 234 VDG---FMAKALENGDWKAKLDAAMQ 256 >gi|257488015|ref|ZP_05642056.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330891101|gb|EGH23762.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. mori str. 301020] gi|331008689|gb|EGH88745.1| amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 266 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 84/242 (34%), Gaps = 11/242 (4%) Query: 8 SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGFDVDFCRA 66 + L L +S + + L I++R L G+ F + KG +V+ Sbjct: 1 MLGVLASLTVSSAALADATLDRIQERHRLVVGVLLSGGPFGSIDPQTRKPKGVNVELAED 60 Query: 67 LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126 + + D ++ + + R LQ ++D+L N +WT R LG P G Sbjct: 61 IGKRLGVD---VELVSVLTANRVQFLQQGKVDLLIANMEWTPERGQLLGSVPTPFYRVGG 117 Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 ++ K I+ L G +C G++ L + F+ E A Sbjct: 118 TAAVL-KDSKITRWEDLKGQPVCTSQGSSYIKALTE------FGADIKAFKSSSESLLAL 170 Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 R + C A D + + L ND + + ++ +P G+ + + Sbjct: 171 RGNNCVAAVHDATLVNPLLAGNDEWKGYRAITPELNPAPSVIWTRSGEADTQKRLDSIVQ 230 Query: 247 AM 248 Sbjct: 231 EW 232 >gi|330813245|ref|YP_004357484.1| cyclohexadienyl dehydratase [Candidatus Pelagibacter sp. IMCC9063] gi|327486340|gb|AEA80745.1| cyclohexadienyl dehydratase [Candidatus Pelagibacter sp. IMCC9063] Length = 257 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 86/243 (35%), Gaps = 13/243 (5%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGF 59 M K ++ ++ + S L I K G L+ G + ++GF Sbjct: 3 MKKIILTLLITVMAFS----ANAESRLNKILKSGELRVGTTGDWDPMSLKDPATNKYRGF 58 Query: 60 DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119 D+D L+ + ++Y+P + K + S + DI +T T + +L F Sbjct: 59 DIDVSTELAKDMGVK---VKYVPTDWKTIVSGITSDRYDI---STSATKTAKRALVAGFT 112 Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G ++ KK + S + V TT + + K +K E Sbjct: 113 NSYYKYGTVALVLKKNIKKFPTWESLNNKNVTIATTLGTSQEEMAKKIFVKSKLKSIEAP 172 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 + R D + S+ A KL P ++ + + LA I Q D W N Sbjct: 173 ARDFQEVLSGRADGHIT--SSTEANKLVITYPQLAIVPDGGKNPAVLAILIDQSDQVWLN 230 Query: 240 IVS 242 V+ Sbjct: 231 YVN 233 >gi|326693349|ref|ZP_08230354.1| amino acid ABC transporter periplasmic protein [Leuconostoc argentinum KCTC 3773] Length = 481 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 33/251 (13%), Positives = 75/251 (29%), Gaps = 19/251 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + + + L++ F + +A + + F N + G + Sbjct: 3 MLKRYVLGLATLVMFFLLTPIASAD-------KPHYTITTDATYAPFTFQDKNNRYVGIE 55 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 D +A++ + P++ + + Q D + T R F Sbjct: 56 QDMMKAIAER---ERFTYTMKPMSFNSAAQLVSNGQADGIIAGMSITPER--RQVYDFST 110 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y G +I+ K I S++ L G ++ ++ GT K + F + Sbjct: 111 PYYKTGVAWIVKKGSKIKSLADLKGQTVALKTGTAASEYGLSLQKKYGF--QVKYFNDTD 168 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL--PDIISKSPLAPAIIQGDTEWY 238 + A D+ + + ++ + A+ +G + Sbjct: 169 TMYNDVAVGNSAATFEDMPVI---QYAIKNGMALKVMNPDQPGNAGSYGFAVEKGKNKAL 225 Query: 239 NIVSWTHYAMV 249 +A + Sbjct: 226 LAAFNRGFAAI 236 >gi|296138522|ref|YP_003645765.1| polar amino acid ABC transporter inner membrane subunit [Tsukamurella paurometabola DSM 20162] gi|296026656|gb|ADG77426.1| polar amino acid ABC transporter, inner membrane subunit [Tsukamurella paurometabola DSM 20162] Length = 483 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 73/223 (32%), Gaps = 15/223 (6%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62 + ++ ++++ + A L D G L+ G ++ + G+DV+ Sbjct: 5 RRLLAALFAVLVVAGPLPANAAPPLPD---PGVLRVGTEGVYQVYSYHDSADRLTGYDVE 61 Query: 63 FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122 A++ I +++++ AL++ + D+++ T E + Sbjct: 62 MITAIAQKIGW---RVEFVETPWDSMMAALEANRFDLVANQ--VTFSAERAAKYELSDPY 116 Query: 123 YFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181 G ++ K I S+ L G + Q+ T++ +A+ A + Sbjct: 117 LQTGGSVLVRKDDNSIDSLDDLRGRT-AAQSITSSWSGVAEKAGAK-----VEAVNSFTD 170 Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224 A R DA D + N R + Sbjct: 171 AVNVLAAGRVDAVVNDTGVVRNYLAVNPRAPVKIAAQTPDRSQ 213 >gi|150389059|ref|YP_001319108.1| extracellular solute-binding protein [Alkaliphilus metalliredigens QYMF] gi|149948921|gb|ABR47449.1| extracellular solute-binding protein, family 3 [Alkaliphilus metalliredigens QYMF] Length = 269 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 87/264 (32%), Gaps = 25/264 (9%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRG----------FLKCGINTGLVGFAEV 50 M K + L+ L + S +++ +K G + G + + Sbjct: 1 MKKRIV--LFALLSLIVGVLAACQST--EVESTDNDPSPEVSLDTIKVGTSGGYHPYTFM 56 Query: 51 KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 + GF++D + +IQ+ F L S +I+ ++ T R Sbjct: 57 NDDDTLDGFEIDTWNEIGERA---NLEIQFETSAFSGLFGMLDSNRINTIANQITMTAER 113 Query: 111 EISLGLAFRPITYFDGQGFIMH-KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 E F F G ++ I+S+ L G + V G+ E L ++ + Sbjct: 114 EE--KYLFTEPYVFSGAQILVKGDNDSITSLEDLKGKRVGVSLGSNYEQLLREFDTEN-- 169 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + + +E R DA D L ++ + + D + A Sbjct: 170 EIDIVTYEDFSGSVQEVALGRLDAMINDR--LASMINIESSGLDLKLGGDPVHPLQNAFP 227 Query: 230 IIQGDTEWYNIVSWTHYAMVTAEE 253 + + E +V + A+V+ E Sbjct: 228 FVDNE-ENAVLVERINNAIVSMHE 250 >gi|323127010|gb|ADX24307.1| arginine-binding protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 252 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 34/249 (13%), Positives = 70/249 (28%), Gaps = 16/249 (6%) Query: 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDWKGFDVDFCRALSSAI 71 + + + IK+ G L ++ F V G D+ +A++ + Sbjct: 1 MAACGKAEKVNRQDSIKQAGKLVVAVSPDYAPFEFKALVNGKDTIVGADIQLAQAIADEL 60 Query: 72 FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131 ++ P++ +LQ+ + D+ +T R F Y +M Sbjct: 61 GVK---LELSPMSFDNVLSSLQTGKADLAISGLSYTKERAKV--YDFSTPYYETENAILM 115 Query: 132 H--KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 K V+ L G + Q G+ E + N + + E +A Sbjct: 116 RAADAKAAKDVTSLEGQKVAAQKGSIEEGLVKSQLPKSN----LVALTAMGEAINELKAG 171 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 + A + + + A A+ + V+ Sbjct: 172 QVYAVDLEGPVAAGYLAQHKDLALASFSLKTTDGDAKAVALPKNSGTLTKTVNKVI--AK 229 Query: 250 TAEELGITQ 258 AE+ Sbjct: 230 LAEDDQYKA 238 >gi|229528070|ref|ZP_04417461.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae 12129(1)] gi|229334432|gb|EEN99917.1| amino acid ABC transporter amino acid-binding protein [Vibrio cholerae 12129(1)] Length = 278 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 42/243 (17%), Positives = 83/243 (34%), Gaps = 20/243 (8%) Query: 14 ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73 + +++ L IK+RG L+ G++T V +A GD GF++D + L++ Sbjct: 24 AFTLPAVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGDLIGFEIDVAKRLAADSGW 82 Query: 74 DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133 +++++P AL +K+ D++ T R S + F G K Sbjct: 83 ---QVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAASK 137 Query: 134 K--KGISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189 K +G + + I + G T + F + F+ + Sbjct: 138 KLAEGFFKLEDFNKRNVKIAARRGAFTVQVARETFPKA----SVLQFDDDAQAFQEVING 193 Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249 A + + + + +SK A A+ G+ + + Sbjct: 194 NAHAVIASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEED-----KKAFFDQW 247 Query: 250 TAE 252 AE Sbjct: 248 IAE 250 >gi|150403716|ref|YP_001331010.1| extracellular solute-binding protein [Methanococcus maripaludis C7] gi|150034746|gb|ABR66859.1| extracellular solute-binding protein family 3 [Methanococcus maripaludis C7] Length = 253 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 37/245 (15%), Positives = 89/245 (36%), Gaps = 11/245 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M+ + I + ++ F+ + I++ G L GI+ L + + + GF+ Sbjct: 1 MFNPKILIISTIFLIIFSGCIAENTNKTTIQE-GILTIGISPDLPPISYLDNK-NPAGFE 58 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D ++ + +P + A+++ +ID T RE + F Sbjct: 59 IDLITEIAKRMSLEPE---FKIYEFSSLLDAVENSEIDCAVALIAITPERE--NKVDFSR 113 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 + ++ + + + L + V G+ E + + +M++ + +E E Sbjct: 114 CYFKTYTTILVKENDFCNGLKCLENKKVGVLKGSVQESLMEGFLD--DMEFELVHYENQE 171 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240 + + D+ + A L NDR I+ D + + A A+ + + Sbjct: 172 YMHKDLLSGSIDSEVCEFLT--AKNLINDRNYSLKIVGDQMDINYDAIAVNSENDDLKRA 229 Query: 241 VSWTH 245 ++ Sbjct: 230 INTAI 234 >gi|226314123|ref|YP_002774019.1| amino acid ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] gi|226097073|dbj|BAH45515.1| amino acid ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] Length = 270 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 85/261 (32%), Gaps = 24/261 (9%) Query: 1 MYKD-----FFVSILCLIILFFTSFSTNASILGDIKK------RGFLKCGINTGLVGFAE 49 M K +S + + L ++ + S + + ++ F+ Sbjct: 1 MKKRAKWSGILLSTVLVGSLLLSACGSQGSAPAAGGQAAGDGGKKDFTYAMSGVYKPFSF 60 Query: 50 VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109 NG GFDV+ +AL+ + + I + L +K+ D + + T Sbjct: 61 K-ENGQLTGFDVEIGQALAEKMGMNAVPIT---NPFETIIPGLDAKKYDAVIGSLTVTPE 116 Query: 110 REISLGLAFRPITYFDGQG-FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168 R+ + F Y G F+ I + L G I V + D+ K Sbjct: 117 RQK--AVLFTNPYYRSGSQIFVQEGNTTIKTKEDLKGKKIGVVKAS----NYLDWAKKLT 170 Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228 + ++ R DA D + L+ + + + + + +S A Sbjct: 171 DEDKITQYDSDITALLDLPTGRLDAVITD--QVVGLRFIKEGGGKVIDVGEPLSFDEQAI 228 Query: 229 AIIQGDTEWYNIVSWTHYAMV 249 A+ GD E ++ +V Sbjct: 229 AVRLGDQEAVERINKALDEIV 249 >gi|169334792|ref|ZP_02861985.1| hypothetical protein ANASTE_01198 [Anaerofustis stercorihominis DSM 17244] gi|169257530|gb|EDS71496.1| hypothetical protein ANASTE_01198 [Anaerofustis stercorihominis DSM 17244] Length = 257 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 36/237 (15%), Positives = 63/237 (26%), Gaps = 11/237 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K + L + + S +T F ++ G D Sbjct: 1 MKKGKRILACILAVGLIVGLAGCGSKSDSKGGDKSYIIATDTTFAPFEFTDDKNNFTGID 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD A++ D L AL+S Q D + T R F Sbjct: 61 VDILSAIAKDQGFDYE---LQSLGFDAAVAALESGQADGVIAGMSITDERAK--KYDFSD 115 Query: 121 ITYFDGQGFIMHK-KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 Y G + I S L+G + + GT + F+ Sbjct: 116 AYYDSGVVMAIKADDSSIKSYEDLNGKKVACKTGTEGATFAESIKDKYGF--EIAYFKDS 173 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 ++ + A D + + ++ D+ S A+++G Sbjct: 174 PKMYEDVKTGNTVACFEDYPVMGYGISQ---GNGLKMVTDMEKGSSYGFAVLKGKNA 227 >gi|170758579|ref|YP_001786790.1| amino acid ABC transporter, amino acid-binding protein [Clostridium botulinum A3 str. Loch Maree] gi|169405568|gb|ACA53979.1| amino acid ABC transporter, amino acid-binding protein [Clostridium botulinum A3 str. Loch Maree] Length = 272 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 71/202 (35%), Gaps = 16/202 (7%) Query: 1 MYKD----FFVSILCLIILFFTSFSTNASILGD-----IKKRGFLKCGINTGLVGFAEVK 51 M K VS L +I L + A+ + K + G + + + Sbjct: 1 MKKKKLSLILVSALAVITLLAGCGNEKATSTEEQNTGNSKSEKKIIVGTSPDYYPWCYTE 60 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 A G +GF++D + D I++ F L + QID ++ T R Sbjct: 61 A-GKLQGFEIDVWNEIGKKAGYD---IEFKQSKFSGLFGMLDAGQIDTVAHQISTTEERR 116 Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171 F + G F+++K K I S+ L G + G E TL + + Sbjct: 117 K--KYDFTETYAYSGYSFVVNKDKDIKSLEDLKGKKVGCTLGGNGEKTLKKLNEEKGLNI 174 Query: 172 HPIVFERVEEIDAAYRAHRCDA 193 + +++ ++ R DA Sbjct: 175 KVLTYDQTP-MEKDVEIGRLDA 195 >gi|312863094|ref|ZP_07723332.1| lysine-arginine-ornithine-binding periplasmic protein [Streptococcus vestibularis F0396] gi|311100630|gb|EFQ58835.1| lysine-arginine-ornithine-binding periplasmic protein [Streptococcus vestibularis F0396] Length = 732 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 72/219 (32%), Gaps = 11/219 (5%) Query: 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLA 91 + +++ F +G + G DVD A++ + ++ A Sbjct: 274 AKETYTISMDSSFAPFEYQNGSGKYVGIDVDIINAIAK---NQGFNVKLTNPGFDASLNA 330 Query: 92 LQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQ 151 +QS Q D + T R+ F Y + K I S L G ++ + Sbjct: 331 VQSSQADAVLAGMTITDARK--QIFDFSDSYYTSNIRLAVAKGSKIKSYKDLKGKTVGAK 388 Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211 GT++ L D+ + ++ + + + DA D L + Sbjct: 389 NGTSSYSWLEDHAGEYGF--TVRAYDEASTMYDSLNSGSIDALMDDE---AVLLYAIQQG 443 Query: 212 SEHVILPDIISKSPLAPAIIQG-DTEWYNIVSWTHYAMV 249 + I+ + A+ +G + E + + A+V Sbjct: 444 RNFTTPIEGIATGDVGFAVKKGANPELIEMFNNGLAAIV 482 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 64/210 (30%), Gaps = 15/210 (7%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K L + +FF + ++ + +T F ++ +KG D Sbjct: 1 MKKKLLTLFLSAMSVFFVFGAKVSAE--------TISVVSDTAYAPFEFKDSDQIYKGID 52 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 VD ++ D + A+QS Q D L T T R+ F Sbjct: 53 VDIINEVAKRKNWD---VNQTFPGFDAAVNAVQSGQADSLMAGTTVTDARKKV--FTFSD 107 Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180 Y +S QL G ++ V+ GT + L + F+ + Sbjct: 108 TYYDTSIVIYTRSSDKVSDYKQLKGKTVGVKNGTAAQTWLDKNASKYGF--TVKTFDTSD 165 Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDR 210 ++ + + DA D + Sbjct: 166 LMNNSLDSGSVDAAMDDTPVVKYAIGQGKD 195 >gi|158424034|ref|YP_001525326.1| putative soluble lytic transglycosylase [Azorhizobium caulinodans ORS 571] gi|158330923|dbj|BAF88408.1| putative soluble lytic transglycosylase [Azorhizobium caulinodans ORS 571] Length = 262 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 41/247 (16%), Positives = 71/247 (28%), Gaps = 11/247 (4%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDV 61 K +L T S L ++K G LK F + G ++G D+ Sbjct: 7 KALGTGLLLAAFALGTPARAQESHLEQVQKIGALKVCTTGDYRPFTYLDPATGKFEGIDI 66 Query: 62 DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121 D L +A+ ++++ + DI TL R+ + + + Sbjct: 67 DLANDLGTALGVK---VEFVKTSWSNLMKDFTGGACDIAMGGISITLPRQKAAYFSIPIM 123 Query: 122 TYFDGQGFIMHKKKGISSVSQL--SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179 +++ + G + V G T E K +VF Sbjct: 124 VDGKTPITKCENVSKFQTLADIDKPGVTAVVNPGGTNESFARASLK----NAKIVVFPDN 179 Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239 I A R D D + + V + S A + QGD + Sbjct: 180 TTIFEEILAGRADLMMTDAIETRLQEKRHP-GLCAVHPDKPFTFSEKAFLLPQGDEVFKA 238 Query: 240 IVSWTHY 246 V + Sbjct: 239 FVDQWLH 245 >gi|331005148|ref|ZP_08328548.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [gamma proteobacterium IMCC1989] gi|330421028|gb|EGG95294.1| Amino acid ABC transporter, periplasmic amino acid-binding protein [gamma proteobacterium IMCC1989] Length = 265 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 81/238 (34%), Gaps = 11/238 (4%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60 M K +I+ +++ + S + I G +K + G V F GD+ GFD Sbjct: 1 MIKRIISTIVISSAASWSTLGYSESTISSIISSGEIKSCFDAGYVPFEMKSKKGDYIGFD 60 Query: 61 VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120 +D + ++ + + +L +K+ DI++ T R ++ + F Sbjct: 61 IDIMKLMAKKMGVKFVPVN---TAWDGIIASLITKKCDIIAAGMTITAER--NVKINFAN 115 Query: 121 ITYFDGQGFI--MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178 GQ + K I S L+ + T T+A K K FE Sbjct: 116 PYITVGQTVLLNPKIKDEIKSYKDLNDPKYTLTTKIGTSATVAMQNKLSKAKSRL--FES 173 Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236 +E DA D+ N H L + PL A+ GD + Sbjct: 174 QDEAALEVINGNADALVFDLPYNALFAAQNKGKVVH--LDQPFTYEPLGWAVRAGDPD 229 >gi|227496260|ref|ZP_03926556.1| ABC superfamily ATP binding cassette transporter solute-binding protein [Actinomyces urogenitalis DSM 15434] gi|226834185|gb|EEH66568.1| ABC superfamily ATP binding cassette transporter solute-binding protein [Actinomyces urogenitalis DSM 15434] Length = 314 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 67/227 (29%), Gaps = 17/227 (7%) Query: 28 GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87 I G L G++ + + G+D+D RAL++ + + + Sbjct: 65 ESISSDGKLTIGVSADYPPAEFLDTSNQPVGYDIDLSRALAAVLGLEATA---QHAEFDS 121 Query: 88 RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG----ISSVSQL 143 ++ S + D+ + T RE S + G F + K +S L Sbjct: 122 IIPSIGS-KYDLGISSFTITPEREASTEM---VSYISVGSQFNVAKGNPTGLDLSDTLGL 177 Query: 144 SGASICVQAGTTTELTLA----DYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199 G ++ VQ GT E + D A + + A DA D + Sbjct: 178 CGKTVGVQTGTAQEEDIQGFNEDCQAAGKDAIDIKSYALNSDATTALAGGTLDAVFSDST 237 Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246 A + +P I +GD + Sbjct: 238 --VAGYAQIQTGGAVETAGKVFDAAPQGIVIAKGDEATAKAIQAAVQ 282 >gi|45358113|ref|NP_987670.1| amino acid ABC transporter periplasmic protein [Methanococcus maripaludis S2] gi|44920870|emb|CAF30106.1| similar to ABC-type amino acid transport system, periplasmic component [Methanococcus maripaludis S2] Length = 264 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 84/256 (32%), Gaps = 23/256 (8%) Query: 1 MYKDFFVSILCLIILFFT---------SFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51 M + I+ LI + ST + ++++ G LK G+ F Sbjct: 1 MNNKVLILIIGLIGAVLAFSGCVSNSEAQSTEDNSWKNVEESGVLKVGLCAAWPPFESRN 60 Query: 52 AN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110 G+ +GFDVD AL + + ++ + + L D L Sbjct: 61 EKTGEIEGFDVDLANALGEELGIE---VEIVDAEWQALLGGLSKGDYDTLITCMS--KKE 115 Query: 111 EISLGLAFRPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + + Y ++ I++VS LSG + VQ G+ +E + A + Sbjct: 116 ASVENVEMSEVYYELNDVIVVRNDNNEINNVSDLSGKIVGVQLGSGSEQAV----DALSG 171 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 + E + +R DA + + + + +L I+ + + Sbjct: 172 IKEIKRYNYNPEAMIDLQNNRSDAVVVGYTYVLSEISKYP---DLKVLDTPIASAEIVMV 228 Query: 230 IIQGDTEWYNIVSWTH 245 +G E ++ Sbjct: 229 QKEGAKELTVKLNEAL 244 >gi|229552146|ref|ZP_04440871.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|258539560|ref|YP_003174059.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc 705] gi|229314448|gb|EEN80421.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|257151236|emb|CAR90208.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus Lc 705] Length = 485 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 37/255 (14%), Positives = 83/255 (32%), Gaps = 24/255 (9%) Query: 3 KDFFVSILCLIILFFTS---FSTNASILGDIKKRGFLKCGINTGLVGFAE---VKANGDW 56 K + ++++ + T L I+++G + G + + Sbjct: 5 KRWLIALVAVFAAIVTLNMQTVQADDSLAKIQQKGTIVMGTSPDYAPYEFLVNKNGKNQV 64 Query: 57 KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116 G DV+ R ++ + + +N +ALQS ++D++ T R + Sbjct: 65 VGMDVEVARKIAKDLGVK---LVIKQMNFSSLLVALQSGKVDMVLAAMSPTNARRK--SI 119 Query: 117 AFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174 F Y GQ +++K + + VQ G+ E K+ + Sbjct: 120 DFSKTYYKSGQDILINKTDAKIYKDHKSFANKKVGVQNGSLQETLAKTQMKS----STTL 175 Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR----PSEHVILPDIISKSPLAPAI 230 +V ++ A + H+ + + A +D+ P + D + A Sbjct: 176 GLTKVTDLILALKTHKVAGVVAEGAVAQAYTSNDDKLVEIPGHFNLSSDTMGT---AIGF 232 Query: 231 IQGDTEWYNIVSWTH 245 +G + + Sbjct: 233 AKGSDSLVAAANKSL 247 >gi|238022358|ref|ZP_04602784.1| hypothetical protein GCWU000324_02265 [Kingella oralis ATCC 51147] gi|237866972|gb|EEP68014.1| hypothetical protein GCWU000324_02265 [Kingella oralis ATCC 51147] Length = 279 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 79/262 (30%), Gaps = 26/262 (9%) Query: 3 KDFFVSILCLIILFFTSFSTNASILGDIKK-----------------RG-FLKCGINTGL 44 K + + + L + ++ + G L+ N Sbjct: 4 KTWLSAAFSCLTLSLAACGGQSNAPANHSASHPAPAAASGASGTADGNGRVLRVAGNATF 63 Query: 45 VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104 F + N GFD+D A+ A K++Y + F AL + D+L Sbjct: 64 APFESLDENKKVTGFDIDLINAMGEA---GNFKVEYKDQPWESLFPALSNGDADVLVSGI 120 Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG-ASICVQAGTTTELTLADY 163 T R+ ++ F Y Q ++ K ++ V L I V G T + Sbjct: 121 TITDERKATMA--FSEPYYQITQVVLVPPSKNVAKVEDLKKLHKIGVVTGYTGDYAAQKI 178 Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223 F + F+ V + DA D + + N ++ Sbjct: 179 FGP--TSEQVVRFDNVGLLTKEVENGGVDAGILDNAVVAHYIKNNSSKGFKMVALPDFPA 236 Query: 224 SPLAPAIIQGDTEWYNIVSWTH 245 A+ + D + +++ + Sbjct: 237 EHYGMAVRKDDAQTLALLNDSL 258 >gi|153216005|ref|ZP_01950227.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 1587] gi|124114518|gb|EAY33338.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Vibrio cholerae 1587] Length = 278 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 86/242 (35%), Gaps = 20/242 (8%) Query: 19 SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78 + +++ L IK+RG L+ G++T V +A G+ GF++D + L++ ++ Sbjct: 29 AVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAADSGW---QV 84 Query: 79 QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK--KG 136 +++P AL +K+ D++ T R S + F G +KK +G Sbjct: 85 EFVPTAWDGIIPALLAKKFDVIIGGMSVTPER--SKSVLFTAPYSHSGVQLAANKKLAEG 142 Query: 137 ISSVSQLS--GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194 S + + I + G T + F + F+ + A Sbjct: 143 FSKLEDFNKRNVKIAARRGAFTVQVARETFPKA----SVLQFDDDAQAFQEVINGNAHAV 198 Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN-----IVSWTHYAMV 249 + + + + +SK A A+ G+ + I T + Sbjct: 199 IASSPKPEHESIKHSDSL-FLPFSERLSKGNEAFAVRLGEEDKKAYFDQWIADRTADGWL 257 Query: 250 TA 251 A Sbjct: 258 QA 259 >gi|118473444|ref|YP_889564.1| glutamine ABC transporter permease/substrate-binding protein [Mycobacterium smegmatis str. MC2 155] gi|118174731|gb|ABK75627.1| glutamine ABC transporter, permease/substrate-binding protein [Mycobacterium smegmatis str. MC2 155] Length = 468 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 84/288 (29%), Gaps = 32/288 (11%) Query: 6 FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65 +++ L+ L AS G+ + F A+G + G D+D Sbjct: 1 MLAVAALVGLIPMVAPATASAEGE-----TYVVATDITFAPFEFQDASGKFVGIDIDLIN 55 Query: 66 ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125 +++ + PL A+Q+ Q D + T R+ F + Sbjct: 56 EIAAD---QNFTVTIKPLGFDAALQAVQANQADGVIAGMSITDERKKV--FDFSDPYFES 110 Query: 126 GQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184 G ++ I S L G + V+ GT + + F + Sbjct: 111 GVQMAVLASDDDIKSYEDLRGKRVAVKNGTEGAEFAESIKDKYGF--TTVYFADSASMFD 168 Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244 R A D L+ + + + + A+ +G Sbjct: 169 EVRTGNSQAVFEDYPV---LQYGIAQGNGFKTVTPKEKGANYGFAVNKGQ---------- 215 Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPD-VQRFLGIDKSSNIGEALGL 291 AE L + Q+ + + + +LG + N LGL Sbjct: 216 -----NAELLQKFNAGLAQLKESGRYDEIISTYLGEEAVDNDNSFLGL 258 >gi|329927997|ref|ZP_08282001.1| ABC transporter, permease protein [Paenibacillus sp. HGF5] gi|328938101|gb|EGG34498.1| ABC transporter, permease protein [Paenibacillus sp. HGF5] Length = 482 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 100/296 (33%), Gaps = 18/296 (6%) Query: 1 MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + F+V + L+++ S G+ + G + F A+G + G Sbjct: 1 MKSLRVFYVFMSLLLLMAVGVPYWTVSAAGEPASGKTYQIGTDVTFAPFEFQDASGKFVG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 D+D A++ K + PL AL++ Q+D + T R+ F Sbjct: 61 IDMDLLDAIAKD---QNFKYEIKPLGFNAAVQALEANQVDGVIAGMSITDERK--QKFDF 115 Query: 119 RPITYFDGQGFIMHKKKG-ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177 + G + + + I S L G + V+ GT + + F+ Sbjct: 116 SDPYFDSGVVMAIRQDQESIKSYEDLKGKKVAVKTGTEGYSFAESISSKYGF--TIVPFD 173 Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE- 236 ++ + A D L ++ + I+ ++ + A+ +G + Sbjct: 174 DSAQMYDDVKTGNSVACFDDFPVLA---YGVEQNNGLKIVTEMEPGASYGFAVSKGRNQE 230 Query: 237 -WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF-LGIDKSSNIGEALG 290 + + E I +K I + + R+ L ++ ++ + LG Sbjct: 231 LLEKFNAGLVNLKASGEYDRIKEKYIGENAVSAAKQS--RWGLIVESLPSLLKGLG 284 >gi|313140336|ref|ZP_07802529.1| solute binding protein of ABC transporter system [Bifidobacterium bifidum NCIMB 41171] gi|313132846|gb|EFR50463.1| solute binding protein of ABC transporter system [Bifidobacterium bifidum NCIMB 41171] Length = 295 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 88/260 (33%), Gaps = 21/260 (8%) Query: 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGF---------LKCGINTGLVGFAEVK 51 M + F + L ++ S + S G + G+ + G Sbjct: 1 MRR--FSAALAAVLWTAGSLTACGSSSSRDDANGVSIRQPEGPTVSIGVASDQPGLGVW- 57 Query: 52 ANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111 NG + GFDVD R ++ A+ +I + P+ + R L+S Q+D++ + T E Sbjct: 58 HNGGYSGFDVDVARYVAKALGYADKQIVFKPVTPRSRVSMLESAQVDMVVSSFGITERHE 117 Query: 112 ISLGLAFRPITYFDGQGFIMHKKK--GISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169 + Q ++ I+ + ++G CV AG+ + D ++ Sbjct: 118 S--AVTMTGPYLIVRQDLLVRAADAGDITGIKDMNGRKACVVAGS----DVTDAVRSQAP 171 Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229 K + + + DA + L L ++ + A Sbjct: 172 KASIEERDDYGQCLTSLLIGDVDAVAAGDAILTGLATVKGNGYV-QVVGAPFGEERYGIA 230 Query: 230 IIQGDTEWYNIVSWTHYAMV 249 + G+T+ + + M+ Sbjct: 231 VKHGNTQLADSIGDILSDMI 250 >gi|207725137|ref|YP_002255534.1| cyclohexadienyl dehydratase precursor protein [Ralstonia solanacearum MolK2] gi|206590369|emb|CAQ37330.1| cyclohexadienyl dehydratase precursor protein [Ralstonia solanacearum MolK2] Length = 267 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 75/262 (28%), Gaps = 18/262 (6%) Query: 1 MYKDFF--VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWK 57 M+ F ++L + + + + L +I RG L+ G F+ +G + Sbjct: 1 MFVRFIRSTALLLCACVAAPALAQTTNRLDEILARGTLRVGSTGDYKPFSYKTTGDGRFI 60 Query: 58 GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117 G DV+ L+ A+ + + DI TL R+ Sbjct: 61 GLDVEMGERLAKALGVKLEVVP---TTWSTLMRDFGEDRFDIAMSGISVTLERQK--KAF 115 Query: 118 FRPITYFDGQGFIMHKKKGISSVS----QLSGASICVQAGTTTELTLADYFKAHNMKYHP 173 + DG+ I + + G V G T E ++ K Sbjct: 116 YSIPYQRDGKTPIARCENKDKFQTLEQIDQPGVRTVVNPGGTNEKFAREHLKQA----QI 171 Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233 V+ I A R D D L+ V S A + + Sbjct: 172 RVYPDNVTIFNEIVAGRADLMMTDAVETR-LQQKLHPELCAVHPDAPFDFSEKAYLLPR- 229 Query: 234 DTEWYNIVSWTHYAMVTAEELG 255 D + N V + + E Sbjct: 230 DVVFKNFVDQWLRQTMESGEFA 251 >gi|116254809|ref|YP_770645.1| putative substrate-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115259457|emb|CAK10595.1| putative substrate-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 267 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 80/265 (30%), Gaps = 18/265 (6%) Query: 1 MYKDFFVSIL--CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58 M + +IL L+ F + + + R ++ + F + AN +G Sbjct: 1 MLRISIQTILRGALMAGGIGIFLAASPLEVAAQDRTPMRIAVEGAFPPFNYLDANNKLQG 60 Query: 59 FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118 FD+D AL + Q++ + L + + D + + +L R +AF Sbjct: 61 FDIDIANALCE---VGKFECQFIIEKWDDIIPNLVADKYDAIISSMSMSLER--RQKVAF 115 Query: 119 RPITYFDGQGFIMHKKKGIS--SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176 Y FI+ K I+ S LS + V + T E + +F Sbjct: 116 TEKYYNSPSVFIVRKDSSINDISPVALSDKKLGVTSSTAQESFANHLYPE----MEKTIF 171 Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI-----LPDIISKSPLAPAII 231 E+ D D A+Y S + A+ Sbjct: 172 RSSPELYKGLADGSVDIILEDKLAIYDWIANTKAGSCCEFKGPDLVDVTYFGEGAGIALR 231 Query: 232 QGDTEWYNIVSWTHYAMVTAEELGI 256 D E ++ ++ + Sbjct: 232 LDDKERLTRLNEALKSIKADGTYDM 256 >gi|121606948|ref|YP_984277.1| extracellular solute-binding protein [Polaromonas naphthalenivorans CJ2] gi|120595917|gb|ABM39356.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 264 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 80/261 (30%), Gaps = 25/261 (9%) Query: 18 TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77 + + L I R + GI T + + + +G DV + ++ + Sbjct: 21 SVPAQADDSLTAIMARKSISLGIATDFPPYGFMSPDFKPQGLDVAVAQLIADKLGVKAE- 79 Query: 78 IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137 P++ R LQ+K+ID++ + R + F Q K I Sbjct: 80 --MTPVSTPNRIPYLQTKKIDLIVSSLGKNPERAKV--IDFSVAYAPFYQAVFGPKALSI 135 Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197 S L+G SI V GT + L FE AA+ + + Sbjct: 136 KSFQDLAGKSIAVTRGTIQDDVLQQVAP---PTLKIQRFEDDNSTVAAFVSQQTQLLATG 192 Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257 + P ++ SP + +G+T + V+ Sbjct: 193 AAVAGVAIQ--KNPQIQAEYKLLLKDSPNFIGVRKGETALLDKVNEILR----------- 239 Query: 258 QKNINQVSKDTTNPDVQRFLG 278 + T N QR+LG Sbjct: 240 ----QAKADGTLNTYAQRWLG 256 >gi|312869117|ref|ZP_07729291.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3] gi|311095363|gb|EFQ53633.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3] Length = 502 Score = 102 bits