BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780170|ref|YP_003064583.1| cationic amino acid ABC
transporter, periplasmic binding protein [Candidatus Liberibacter
asiaticus str. psy62]
         (342 letters)

Database: nr 
           13,984,884 sequences; 4,792,584,752 total letters

Searching..................................................done



>gi|227821880|ref|YP_002825850.1| hypothetical protein NGR_c13170 [Sinorhizobium fredii NGR234]
 gi|227340879|gb|ACP25097.1| hypothetical protein NGR_c13170 [Sinorhizobium fredii NGR234]
          Length = 341

 Score =  382 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 182/342 (53%), Positives = 261/342 (76%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    ++    ++   + + +A+ L D+K +GF++CG+NTGL GFA   A+G+W GFD
Sbjct: 1   MARRILTALFGAAVMGIGAQAASAATLDDVKAKGFVQCGVNTGLAGFAAPDASGNWSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+C+A+++A+F D +K++Y P +AKERF ALQS ++D+L+RNT WT+ R+ +LG  FRP
Sbjct: 61  VDYCKAIAAAVFGDATKVKYTPTSAKERFPALQSGEVDVLARNTTWTINRDTALGFNFRP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K   + S  +LSGA++CVQ GTTTEL LADYFK +N++Y+P+VFE++E
Sbjct: 121 VNYYDGQGFMVRKSLNVKSALELSGAAVCVQTGTTTELNLADYFKTNNLQYNPVVFEKLE 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY+L+LT  +P +H+ILP+IISK PL PA+ QGD +W++I
Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLSKPDDHMILPEIISKEPLGPAVRQGDDQWFDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V+W HYA++ AEE G+TQ N+ ++ K + NPDVQRFLG++  S IG  LGLT +W   +I
Sbjct: 241 VTWVHYALIQAEEFGVTQANVEEMKK-SPNPDVQRFLGVEADSKIGTDLGLTNEWAVNVI 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+FDRN+G  S LKI RG NALW+KGG+ YAPP+R
Sbjct: 300 KAVGNYGEVFDRNIGAGSPLKIERGLNALWNKGGIQYAPPVR 341


>gi|116251960|ref|YP_767798.1| general L-amino acid substrate binding protein [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|3182887|sp|Q52812|AAPJ_RHIL3 RecName: Full=General L-amino acid-binding periplasmic protein
           AapJ; Flags: Precursor
 gi|1154894|emb|CAA57933.1| general amino acid ABC type transporter [Rhizobium leguminosarum]
 gi|115256608|emb|CAK07696.1| General L-amino acid substrate binding protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 341

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 190/342 (55%), Positives = 261/342 (76%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      + +   +L   + + +A+ L D+K +GF++CG+NTGL GFA   A+G+W GFD
Sbjct: 1   MKNKLLSAAIGAAVLAVGASAASATTLSDVKAKGFVQCGVNTGLTGFAAPDASGNWAGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFC+A++SA+F DP+K++Y P NAKERF ALQS +ID+LSRNT WT+ R+ +LG  FRP
Sbjct: 61  VDFCKAVASAVFGDPTKVKYTPTNAKERFTALQSGEIDVLSRNTTWTINRDTALGFNFRP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DGQGF++ K   + S  +LSGA+ICVQ+GTTTEL LADYFK +N++Y+P+VFE + 
Sbjct: 121 VTYYDGQGFMVRKGLNVKSALELSGAAICVQSGTTTELNLADYFKTNNLQYNPVVFENLP 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY+L+LT   P EH+ILP+IISK PL PA+ QGD +W++I
Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHIILPEIISKEPLGPAVRQGDDQWFDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSWT YA++ AEE GITQ N++++ K++ NPD++RFLG +  + IG  LGLT DW   +I
Sbjct: 241 VSWTAYALINAEEFGITQANVDEM-KNSPNPDIKRFLGSETDTKIGTDLGLTNDWAANVI 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RN+G  S LKI RG NALW+KGG+ YAPP+R
Sbjct: 300 KGVGNYGEIFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341


>gi|241204488|ref|YP_002975584.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240858378|gb|ACS56045.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 341

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 191/342 (55%), Positives = 261/342 (76%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      + +   +L   + + +A+ L D+K +GF++CG+NTGL GFA   A+G+W GFD
Sbjct: 1   MKNKLLSAAIGAAVLAVGASAASATTLSDVKAKGFVQCGVNTGLTGFAAPDASGNWAGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFC+A++SA+F DP+K++Y P NAKERF ALQS +ID+LSRNT WT+ R+ +LG  FRP
Sbjct: 61  VDFCKAVASAVFGDPTKVKYTPTNAKERFTALQSGEIDVLSRNTTWTINRDTALGFNFRP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DGQGF++ K   + S  +LSGA+ICVQ+GTTTEL LADYFK +N++Y+P+VFE + 
Sbjct: 121 VTYYDGQGFMVRKGLNVKSALELSGAAICVQSGTTTELNLADYFKTNNLQYNPVVFENLP 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY+L+LT   P EHVILP+IISK PL PA+ QGD +W++I
Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHVILPEIISKEPLGPAVRQGDDQWFDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSWT YA++ AEE GITQ N++++ K++ NPD++RFLG +  + IG  LGLT DW   +I
Sbjct: 241 VSWTAYALINAEEFGITQANVDEM-KNSPNPDIKRFLGSETDTKIGTDLGLTNDWAANVI 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RN+G  S LKI RG NALW+KGG+ YAPP+R
Sbjct: 300 KGVGNYGEIFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341


>gi|325292970|ref|YP_004278834.1| general L-amino acid-binding periplasmic protein AapJ precursor
           [Agrobacterium sp. H13-3]
 gi|325060823|gb|ADY64514.1| general L-amino acid-binding periplasmic protein AapJ precursor
           [Agrobacterium sp. H13-3]
          Length = 340

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 172/342 (50%), Positives = 250/342 (73%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +++   +L   S ++ A  L D+K +GF+ CG++ G+ GF+     G+W G D
Sbjct: 1   MKKAILSAVIGAAVLGGASVASAA-TLQDVKSKGFVTCGVSAGIPGFSNPDDKGEWSGID 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CR +++A+F DP+K +++ L++K+RF ALQS ++D+L+RNT WT+ R+ SLG  FR 
Sbjct: 60  VDYCRGIATAVFGDPTKAKFVALSSKDRFPALQSGEVDVLTRNTTWTISRDTSLGFNFRT 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGFI  K   + S  +LSGA++CVQ GTTTEL LADYFK +N++Y+P+VFE+  
Sbjct: 120 VNYYDGQGFIAKKGLNVKSALELSGAAVCVQTGTTTELNLADYFKTNNLQYNPVVFEKES 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +  +AY + RCD YT D S LYA++L    P ++++LP++ISK PL PA+ QGD +W++I
Sbjct: 180 DATSAYDSGRCDVYTTDQSGLYAIRLKLKNPDDNIVLPEVISKEPLGPAVRQGDDQWFDI 239

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V+W HYAMV AEELGIT KN+++  K++ NPD++R LG ++ + IG  LG+T DW Y I+
Sbjct: 240 VTWVHYAMVNAEELGITSKNVDE-QKNSANPDIKRLLGTEEGTKIGTDLGVTNDWAYNIV 298

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+FDRN+G  S LKI RG NALW+KGGL YAPP+R
Sbjct: 299 KKVGNYGEVFDRNVGAGSPLKIERGQNALWTKGGLQYAPPVR 340


>gi|327190790|gb|EGE57858.1| general L-amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CNPAF512]
          Length = 341

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 188/342 (54%), Positives = 264/342 (77%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      + +   +L   + + +A+ LGD+K +GF++CG+NTGL GFA   A+G+W GFD
Sbjct: 1   MKNKLLSAAIGAAVLALGAPAASATTLGDVKAKGFVQCGVNTGLAGFAAPDASGNWAGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFC+A++SA+F DP+K+++ PL+A  RF ALQS +ID+L+RNT W++ R+ +LGL FR 
Sbjct: 61  VDFCKAVASAVFGDPTKVKFTPLSAANRFPALQSGEIDVLARNTTWSINRDTALGLNFRF 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K   + S  +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++
Sbjct: 121 VNYYDGQGFMVRKSLNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY+L+LT   P EH ILP+IISK PLAPA+ QGD +W++I
Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHAILPEIISKEPLAPAVRQGDDQWFDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSW  YAM+ AEE GITQ N++ + K++ NPD++RFLG++  + IG  LGLT +W Y II
Sbjct: 241 VSWVGYAMINAEEFGITQANVDDM-KNSPNPDIKRFLGVEADTKIGTDLGLTNEWAYNII 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +++GNYGE+F+RN+G  S LKI RG NALW+KGG+ YAPP+R
Sbjct: 300 KNVGNYGEVFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341


>gi|15965231|ref|NP_385584.1| general L-amino acid-binding periplasmic ABC transporter protein
           [Sinorhizobium meliloti 1021]
 gi|307316996|ref|ZP_07596437.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Sinorhizobium meliloti AK83]
 gi|15074411|emb|CAC46057.1| Probable general L-amino acid-binding periplasmic ABC transporter
           [Sinorhizobium meliloti 1021]
 gi|306897084|gb|EFN27829.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Sinorhizobium meliloti AK83]
          Length = 341

 Score =  379 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 189/342 (55%), Positives = 267/342 (78%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    +++   ++   + + +A+ L D+K +GF++CG+NTGL GFA   A+G+W GFD
Sbjct: 1   MARRILTALVGAAVVGIGTHAASAATLDDVKAKGFVQCGVNTGLAGFAAPDASGNWSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+C+A+++AIF D SK++Y PL+AKERF ALQS ++D+L+RNT W++ R+ +LG  FRP
Sbjct: 61  VDYCKAIAAAIFGDGSKVKYTPLSAKERFPALQSGEVDVLARNTTWSINRDTALGFNFRP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+  + S  +LSGA++CVQ GTTTEL LADYFKA+N++Y+P+VFE++E
Sbjct: 121 VNYYDGQGFMVRKELDVKSALELSGAAVCVQTGTTTELNLADYFKANNLQYNPVVFEKLE 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY+L+LT  +P +H++LP+IISK PLAPA+ QGD +W++I
Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLSKPDDHIVLPEIISKEPLAPAVRQGDDQWFDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSW HYA+V AEE G+TQ N+ ++ K +TNPDVQRFLG++  S IG  LGLT +W   I+
Sbjct: 241 VSWVHYALVQAEEFGVTQANLEEMKK-STNPDVQRFLGVEADSKIGTDLGLTNEWAVNIV 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+FDRN+G  S LKI RG NALW+KGGL YAPP+R
Sbjct: 300 KAVGNYGEVFDRNIGAGSPLKIERGLNALWNKGGLQYAPPVR 341


>gi|209549162|ref|YP_002281079.1| cationic amino acid ABC transporter periplasmic binding protein
           [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209534918|gb|ACI54853.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 341

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 191/342 (55%), Positives = 262/342 (76%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      +++   +    + + +A+ LGD+K +GF++CG+NTGL GFA   A+G+W GFD
Sbjct: 1   MKNKLLSAVIGAAVFALGTSAASATTLGDVKAKGFVQCGVNTGLTGFAAPDASGNWAGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFC+A++SA+F DP+K++Y P NAKERF ALQS +ID+LSRNT WT+ R+ +LG  FRP
Sbjct: 61  VDFCKAVASAVFGDPTKVKYTPTNAKERFTALQSGEIDVLSRNTTWTINRDTALGFNFRP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DGQGF++ K   + S  +LSGA+ICVQ+GTTTEL LADYFK +N++Y+P+VFE + 
Sbjct: 121 VTYYDGQGFMVRKSLNVKSALELSGAAICVQSGTTTELNLADYFKTNNLQYNPVVFENLP 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY+L+LT   P EHVILP+IISK PL PA+ QGD +W++I
Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHVILPEIISKEPLGPAVRQGDDQWFDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSWT YA++ AEE GITQ N++++ K++ NPD++RFLG +  + IG  LGLT DW   +I
Sbjct: 241 VSWTAYALINAEEFGITQANVDEM-KNSPNPDIKRFLGSETDTKIGTDLGLTNDWAANVI 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RN+G  S LKI RG NALW+KGG+ YAPP+R
Sbjct: 300 KGVGNYGEIFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341


>gi|307309254|ref|ZP_07588922.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Sinorhizobium meliloti BL225C]
 gi|306900255|gb|EFN30872.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Sinorhizobium meliloti BL225C]
          Length = 341

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 188/342 (54%), Positives = 267/342 (78%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    +++   ++   + + +A+ L D+K +GF++CG+NTGL GFA   A+G+W GFD
Sbjct: 1   MARRILTALVGAAVVGIGTHAASAATLDDVKAKGFVQCGVNTGLAGFAAPDASGNWSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+C+A+++AIF D SK++Y PL+AKERF ALQS ++D+L+RNT W++ R+ +LG  FRP
Sbjct: 61  VDYCKAIAAAIFGDGSKVKYTPLSAKERFPALQSGEVDVLARNTTWSINRDTALGFNFRP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+  + S  +LSGA++CVQ GTTTEL LADYFKA+N++Y+P+VFE++E
Sbjct: 121 VNYYDGQGFMVRKELDVKSALELSGAAVCVQTGTTTELNLADYFKANNLQYNPVVFEKLE 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY+L+LT  +P +H++LP+IISK PLAPA+ QGD +W++I
Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLSKPDDHIVLPEIISKEPLAPAVRQGDDQWFDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSW HYA+V AEE G+T+ N+ ++ K +TNPDVQRFLG++  S IG  LGLT +W   I+
Sbjct: 241 VSWVHYALVQAEEFGVTRANLEEMKK-STNPDVQRFLGVEADSKIGTDLGLTNEWAVNIV 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+FDRN+G  S LKI RG NALW+KGGL YAPP+R
Sbjct: 300 KAVGNYGEVFDRNIGAGSPLKIERGLNALWNKGGLQYAPPVR 341


>gi|190891587|ref|YP_001978129.1| general L-amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
 gi|190696866|gb|ACE90951.1| general L-amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
          Length = 341

 Score =  378 bits (970), Expect = e-103,   Method: Composition-based stats.
 Identities = 187/342 (54%), Positives = 264/342 (77%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      + +   +L   + + +A+ LGD+K +GF++CG+NTGL GFA   A+G+W GFD
Sbjct: 1   MKNKLLSAAIGAAVLALGAPAASATTLGDVKAKGFVQCGVNTGLAGFAAPDASGNWAGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFC+A++SA+F DP+K+++ PL+A  RF ALQS +ID+L+RNT W++ R+ +LGL FR 
Sbjct: 61  VDFCKAVASAVFGDPTKVKFTPLSAANRFPALQSGEIDVLARNTTWSINRDTALGLNFRF 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K   + S  +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++
Sbjct: 121 VNYYDGQGFMVRKSLNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY+L+LT   P EH ILP+IISK PLAPA+ QGD +W++I
Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHAILPEIISKEPLAPAVRQGDDQWFDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSW  YAM+ AEE GITQ N++ + K++ NPD++RFLG++  + IG  LGLT +W Y I+
Sbjct: 241 VSWVGYAMINAEEFGITQANVDDM-KNSPNPDIKRFLGVEADTKIGTDLGLTNEWAYNIV 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +++GNYGE+F+RN+G  S LKI RG NALW+KGG+ YAPP+R
Sbjct: 300 KNVGNYGEVFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR 341


>gi|86357519|ref|YP_469411.1| general L-amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CFN 42]
 gi|86281621|gb|ABC90684.1| general L-amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CFN 42]
          Length = 348

 Score =  378 bits (970), Expect = e-103,   Method: Composition-based stats.
 Identities = 187/342 (54%), Positives = 263/342 (76%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      + +   +    + + +A+ LGD+K +GF++CG+NTGL GFA   A+G+W GFD
Sbjct: 8   MKNKLLSAAIGAAVFALGASAASATTLGDVKAKGFIQCGVNTGLAGFAAPDASGNWAGFD 67

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFC+A++SA+F DP+K+++ PL+A  RF ALQS +ID+L+RNT W++ R+ +LGL FR 
Sbjct: 68  VDFCKAVASAVFGDPTKVKFTPLSAANRFPALQSGEIDVLARNTTWSINRDTALGLNFRF 127

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K   + S  +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++
Sbjct: 128 VNYYDGQGFMVRKSLNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLD 187

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY+L+LT   P EH ILP+IISK PLAPA+ QGD +W++I
Sbjct: 188 EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHAILPEIISKEPLAPAVRQGDDQWFDI 247

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSW  YAM+ AEE GITQ N++ + K++ NPD++RFLG++  + IG  LGLT +W Y I+
Sbjct: 248 VSWVGYAMINAEEFGITQANVDDM-KNSPNPDIKRFLGVEADTKIGTDLGLTNEWAYNIV 306

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +++GNYGE+F+RN+G  S LKI RG NALWSKGG+ YAPP+R
Sbjct: 307 KNVGNYGEVFERNIGQGSPLKIARGLNALWSKGGIQYAPPVR 348


>gi|239831564|ref|ZP_04679893.1| lysine-arginine-ornithine-binding periplasmic protein [Ochrobactrum
           intermedium LMG 3301]
 gi|239823831|gb|EEQ95399.1| lysine-arginine-ornithine-binding periplasmic protein [Ochrobactrum
           intermedium LMG 3301]
          Length = 360

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 185/344 (53%), Positives = 251/344 (72%), Gaps = 3/344 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L    LF  +   +A  L D+K +GFL+CG+NTGL+GF+     G+W GFD
Sbjct: 18  MKKTLMTGVLGAAALFCVASGASADTLSDVKAKGFLQCGVNTGLLGFSSPNDKGEWSGFD 77

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRA++SAIF DP+K+++ PLNAKERF ALQS +ID+L RNT WT+ R+ +LGL F  
Sbjct: 78  VDYCRAVASAIFGDPAKVKFTPLNAKERFTALQSGEIDVLIRNTTWTISRDTALGLDFAG 137

Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           I YFDGQGF++   K  GI+S  QLSGASICVQAGTTTE+ +ADYF+A+ M+Y+P+VFE+
Sbjct: 138 INYFDGQGFMINSKKLSGINSALQLSGASICVQAGTTTEMNMADYFRANKMEYNPVVFEK 197

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +EE +AAY + RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD++W 
Sbjct: 198 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDSKWT 257

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           ++V W H A++ AEE GITQ N+ ++ K + NPD++R LG++  + IG  LGL  DW  +
Sbjct: 258 DVVRWVHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGVEADTKIGTDLGLENDWVVK 316

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y  P+R
Sbjct: 317 IIKGVGNYGEIFERNIGSGSPLKIARGINAQWNKGGLQYGIPVR 360


>gi|217977867|ref|YP_002362014.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Methylocella silvestris BL2]
 gi|217503243|gb|ACK50652.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Methylocella silvestris BL2]
          Length = 340

 Score =  377 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 182/343 (53%), Positives = 243/343 (70%), Gaps = 4/343 (1%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M+K +   ++  L ++   +    A +L  ++KRG++ CG N G+ GF      G W GF
Sbjct: 1   MFKMNVVRTLFALGLMIGCAQGAQAGLLDQVQKRGYVICGSNPGVPGFGLPDDKGGWTGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVDFCRA+++AIF+DP+K++++ L+AK+RF ALQS ++D+LSRNT WTL RE   G  F 
Sbjct: 61  DVDFCRAVAAAIFNDPTKVKFIALSAKDRFTALQSGEVDLLSRNTTWTLSRETGQGFLFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            ITY+DGQGF++ KK  +SS  +LSGASICVQ GTTTEL LAD+F+ +NMKY P+ F   
Sbjct: 121 GITYYDGQGFLVRKKLNLSSALELSGASICVQQGTTTELNLADFFRGNNMKYEPVNFANA 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           EE   A+   RCDAYT D S LY  +     P + V+LP+IISK PL PA+ QGD  W+N
Sbjct: 181 EEAVRAFEGGRCDAYTTDASGLYVERQRLADPEDSVVLPEIISKEPLGPAVRQGDDGWFN 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           +V WT +A+V AEELG+T KN+++ +K +  P+V+R LG +   N GE LGL  DW YRI
Sbjct: 241 VVKWTLFALVNAEELGVTSKNVDEKAK-SDRPEVRRLLGFE--GNFGEPLGLDADWAYRI 297

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++H+GNYGE+FDRNLG+ S LKI RG NALW+KGGL YAPPIR
Sbjct: 298 VKHVGNYGEIFDRNLGDSSPLKIKRGINALWTKGGLQYAPPIR 340


>gi|298291387|ref|YP_003693326.1| cationic amino acid ABC transporter periplasmic protein [Starkeya
           novella DSM 506]
 gi|296927898|gb|ADH88707.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Starkeya novella DSM 506]
          Length = 339

 Score =  377 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 164/340 (48%), Positives = 230/340 (67%), Gaps = 2/340 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K    +          + S  A+ L  +K +GF++CG++ GL GF+     G+W G DVD
Sbjct: 2   KRLLSTFAIAGAFGLCAVSAQAAKLDQVKSKGFIQCGVSQGLPGFSTPDDKGNWTGLDVD 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           FCRA+++A+F+DP+K+++ PL+AK+RF ALQS  IDILSRNT WT+ R+ SLGL F  +T
Sbjct: 62  FCRAVAAAVFNDPTKVKFTPLSAKDRFTALQSGDIDILSRNTTWTITRDTSLGLNFTGVT 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+DGQGF++ K K ++S  +LSGAS+C Q GTTTE  LADYF+A+NM Y  I F   +E+
Sbjct: 122 YYDGQGFMIRKDKKVNSALELSGASVCTQTGTTTEQNLADYFRANNMTYEVIAFATNDEV 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             AY A RCD  T D S L   +L    P +HV+LP+IISK PL P +  GD +W++IV 
Sbjct: 182 VKAYDAGRCDVLTTDRSGLAGERLKLTNPDDHVVLPEIISKEPLGPVVAHGDDQWFDIVK 241

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           W  +A + AEELG+T KN+++  K  TNP+++R +G +     GE +G+  DW Y++I+ 
Sbjct: 242 WVLFAQINAEELGVTSKNVDEQLKSATNPEIKRLVGTE--GKFGEGMGIGNDWAYQVIKG 299

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGEM+DRN+G  + LK+ RG NALW+KGG  Y  PIR
Sbjct: 300 VGNYGEMYDRNVGPATPLKLERGANALWTKGGQQYGMPIR 339


>gi|330504740|ref|YP_004381609.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
 gi|328919026|gb|AEB59857.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
          Length = 342

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 172/342 (50%), Positives = 240/342 (70%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +    +L  + F+   + L  ++K+GF++CGI+ GL GF+     G++ G D
Sbjct: 3   MVKSTLAVLTTAAVLGVSGFAQAGATLDAVQKKGFVQCGISDGLPGFSYADEKGNYLGLD 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A+F D +K++Y PL AKERF ALQS ++DILSRNT WT  R+ +LGL F  
Sbjct: 63  VDVCRAVAAAVFGDATKVKYSPLTAKERFTALQSGEVDILSRNTTWTSSRDAALGLNFTG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DGQGF+++KK G+SS  +L GA++C+QAGTTTEL L+DYF+A+ MKY PI ++  +
Sbjct: 123 VTYYDGQGFLVNKKLGVSSAKELDGATVCIQAGTTTELNLSDYFRANGMKYTPITYDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +  A RCD  T D S LYA ++    P ++V+LP++ISK PL P++ QGD EW++I
Sbjct: 183 ESAKSVEAGRCDVLTSDQSQLYAQRIKLANPDDYVVLPEVISKEPLGPSVRQGDEEWFDI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEELG+T  N+ + +K T NPDV R LG +     G+ L L KDW  +I+
Sbjct: 243 VRWTLFAMLNAEELGVTSANVEETAKTTKNPDVARLLGAE--GEFGKDLKLPKDWAVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE FDRN+G  SELKI RG NALW+KGGL YAPP+R
Sbjct: 301 KQVGNYGESFDRNVGAGSELKIERGLNALWNKGGLQYAPPVR 342


>gi|146308575|ref|YP_001189040.1| extracellular solute-binding protein [Pseudomonas mendocina ymp]
 gi|145576776|gb|ABP86308.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Pseudomonas mendocina ymp]
          Length = 342

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 171/342 (50%), Positives = 237/342 (69%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +    +L  + F+   + L  ++K+GF++CGI+ GL GF+     G++ G D
Sbjct: 3   MVKSTLAVLTTAAVLGVSGFAQAGATLDAVQKKGFVQCGISDGLPGFSYADEKGNYLGLD 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A+F D +K++Y PL AKERF ALQS ++DILSRNT WT  R+  LGL F  
Sbjct: 63  VDVCRAVAAAVFGDATKVKYSPLTAKERFTALQSGEVDILSRNTTWTSSRDSGLGLNFAG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF+++KK G+SS  +L GA++C+QAGTTTEL L+DYF+A+ +KY PI ++  +
Sbjct: 123 VNYYDGQGFLVNKKLGVSSAKELDGATVCIQAGTTTELNLSDYFRANGLKYTPITYDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +  A RCD  T D S LYA ++    P ++V+LP++ISK PL P + QGD EW+NI
Sbjct: 183 ESAKSVEAGRCDVLTSDQSQLYAQRIKLANPDDYVVLPEVISKEPLGPVVRQGDDEWFNI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+ +AMV AEELG+T  N+ + +K T NPDV R LG +     G+ L L KDW  +I+
Sbjct: 243 VRWSLFAMVNAEELGVTSANVEETAKTTKNPDVARLLGAE--GEFGKDLKLPKDWAVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE FDRN+G  SELKI RG NALW+KGGL YAPP+R
Sbjct: 301 KQVGNYGESFDRNVGAGSELKIERGLNALWNKGGLQYAPPVR 342


>gi|153009884|ref|YP_001371099.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Ochrobactrum anthropi ATCC 49188]
 gi|151561772|gb|ABS15270.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Ochrobactrum anthropi ATCC 49188]
          Length = 343

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 186/344 (54%), Positives = 251/344 (72%), Gaps = 3/344 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L    LF  +   +A  L D+K +GFL+CG+NTGL+GFA     G+W GFD
Sbjct: 1   MKKTLMTGVLGAAALFSVASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ +LGL F  
Sbjct: 61  VDYCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTALGLDFAG 120

Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           I YFDGQGF++   K  GI+S  QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE+
Sbjct: 121 INYFDGQGFMINSKKLSGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEK 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +EE +AAY + RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD++W 
Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDSKWA 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG++  + IG  LGL  DW  +
Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGVEADTKIGTDLGLDNDWVVK 299

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I++ +GNYGE+F+RN+G  S LKI RG NA W+KGGL Y  P+R
Sbjct: 300 IVKGVGNYGEIFERNIGASSPLKIARGINAQWNKGGLQYGVPVR 343


>gi|148255314|ref|YP_001239899.1| putative amino-acid ABC transporter substrate-binding protein
           [Bradyrhizobium sp. BTAi1]
 gi|146407487|gb|ABQ35993.1| general L-amino acid-binding protein [Bradyrhizobium sp. BTAi1]
          Length = 338

 Score =  374 bits (961), Expect = e-102,   Method: Composition-based stats.
 Identities = 174/342 (50%), Positives = 239/342 (69%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +        L  +   S    A  L  +K RG L CG++ GL GF+     G+W G D
Sbjct: 1   MKRVTLALTFALAPIL-ASVGAQADTLKTVKDRGMLACGVSQGLPGFSSPDDKGNWTGID 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++AIF+DP+KI+++PL+AK+RF ALQS +ID+LSRNT WTL R+ SLG  F  
Sbjct: 60  VDVCRAVAAAIFNDPTKIKFVPLSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGANFAG 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DGQGF++ K   ++S  +L+ AS+CVQ GTTTE  LADYFKA+ MKY  I F   +
Sbjct: 120 VTYYDGQGFMVKKALKVNSALELNSASVCVQTGTTTEQNLADYFKANKMKYEVIAFAGAD 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY + RCD YT D+S LYA +L    P++HV+LP++ISK PL P +  GD +W++I
Sbjct: 180 ETVKAYESGRCDVYTTDVSGLYAERLKLANPADHVVLPEVISKEPLGPMVRHGDDQWFDI 239

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A+VTAEELG+TQ N+++++K +  P+ +R  G D   N+GE LGLTKDW  RI+
Sbjct: 240 VKWTLFALVTAEELGVTQANVDEMAK-SDKPEFKRAFGTD--GNLGEQLGLTKDWFSRIV 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+++RN+G  S+L+I RG N LW+KGGL YAPPIR
Sbjct: 297 KAVGNYGEVYERNVGAGSKLQIARGLNQLWNKGGLQYAPPIR 338


>gi|150396327|ref|YP_001326794.1| cationic amino acid ABC transporter periplasmic binding protein
           [Sinorhizobium medicae WSM419]
 gi|150027842|gb|ABR59959.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Sinorhizobium medicae WSM419]
          Length = 341

 Score =  374 bits (961), Expect = e-102,   Method: Composition-based stats.
 Identities = 188/342 (54%), Positives = 267/342 (78%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    +++   ++   S++ +A+ L D+K +GF++CG+NTGL GFA   A+GDW GFD
Sbjct: 1   MARTILTALVSAAVMGVGSYAASAATLDDVKAKGFVQCGVNTGLAGFAAPNASGDWSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+C+A+++A+F D +K++Y PL+AKERF ALQS ++D+L+RNT W++ R+ +LG  FRP
Sbjct: 61  VDYCKAIAAAVFGDATKVKYTPLSAKERFPALQSGEVDVLARNTTWSINRDTALGFNFRP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+  + S  +LSGA++CVQ GTTTEL LADYFKA+N++Y+P+VFE++E
Sbjct: 121 VNYYDGQGFMVRKELDVKSALELSGAAVCVQTGTTTELNLADYFKANNLQYNPVVFEKLE 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY+L+LT  +P +H++LP+IISK PLAPA+ QGD +W++I
Sbjct: 181 EVNAAYDAGRCDVYTTDQSGLYSLRLTLSKPDDHIVLPEIISKEPLAPAVRQGDDQWFDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSW HYA+V AEE G+TQ N+ ++ K + NPDVQRFLG++  S IG  LGLT +W   I+
Sbjct: 241 VSWVHYALVQAEEFGVTQANVEEMKK-SANPDVQRFLGVEADSKIGTDLGLTNEWAVNIV 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+FDRN+G  S LKI RG NALW+KGGL YAPP+R
Sbjct: 300 KAVGNYGEVFDRNIGAGSPLKIERGLNALWNKGGLQYAPPVR 341


>gi|110633466|ref|YP_673674.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Mesorhizobium sp. BNC1]
 gi|110284450|gb|ABG62509.1| general L-amino acid-binding protein [Chelativorans sp. BNC1]
          Length = 340

 Score =  374 bits (961), Expect = e-102,   Method: Composition-based stats.
 Identities = 166/340 (48%), Positives = 245/340 (72%), Gaps = 3/340 (0%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
           +   ++L  +++       +A+ L D+K RG L+CG+NTGL GFA     GDW+G DVD+
Sbjct: 3   NLIKALLGTVVIASAVIPASAATLDDVKNRGALRCGVNTGLPGFAFQNDQGDWQGLDVDY 62

Query: 64  CRALSSAIF-DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           C+A+++A+F  D +K+QY PL+A +RF ALQ+ ++D+L+RNT WT+ R+ +LGL F  + 
Sbjct: 63  CKAVAAAVFEGDATKVQYSPLSAVQRFPALQNNEVDLLARNTTWTMNRDTALGLNFVGVN 122

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+DGQGF++ +   ++S  QLSGA++CVQ+GTTTEL L DYF+A+NM+++P+V E+  ++
Sbjct: 123 YYDGQGFMVRQDLNVTSALQLSGATVCVQSGTTTELNLTDYFRANNMEFNPVVIEQQSDV 182

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
           ++AY   RCD  T D S LYA +L    P +HV+LP+IISK PL P + QGD +W++IV 
Sbjct: 183 NSAYEQGRCDVLTTDASGLYASRLELSNPDDHVVLPEIISKEPLGPVVRQGDEQWFDIVK 242

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           W H+ ++ AEELG+TQ N+  ++ ++ NPDV+R LG D     G+ +GLT DW   +I+ 
Sbjct: 243 WVHFGLINAEELGVTQDNVEDMAANSENPDVRRLLGAD--GTFGQDVGLTNDWMVNVIKA 300

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGE+FDRN+G  + LKI RG NALW+KGGL YAPP+R
Sbjct: 301 VGNYGEIFDRNVGPNTPLKIQRGLNALWTKGGLQYAPPVR 340


>gi|23501628|ref|NP_697755.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella suis 1330]
 gi|148560716|ref|YP_001258723.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella ovis ATCC 25840]
 gi|161618711|ref|YP_001592598.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           canis ATCC 23365]
 gi|163843013|ref|YP_001627417.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           suis ATCC 23445]
 gi|225627243|ref|ZP_03785280.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           ceti str. Cudo]
 gi|254704068|ref|ZP_05165896.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           suis bv. 3 str. 686]
 gi|254718861|ref|ZP_05180672.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp.
           83/13]
 gi|256060862|ref|ZP_05451022.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           neotomae 5K33]
 gi|256369174|ref|YP_003106682.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella microti CCM 4915]
 gi|260168486|ref|ZP_05755297.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. F5/99]
 gi|260566684|ref|ZP_05837154.1| cationic amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|261324858|ref|ZP_05964055.1| cationic amino acid ABC transporter [Brucella neotomae 5K33]
 gi|261754726|ref|ZP_05998435.1| cationic amino acid ABC transporter [Brucella suis bv. 3 str. 686]
 gi|261757954|ref|ZP_06001663.1| cationic amino acid ABC transporter [Brucella sp. F5/99]
 gi|265983846|ref|ZP_06096581.1| cationic amino acid ABC transporter [Brucella sp. 83/13]
 gi|306837636|ref|ZP_07470506.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp.
           NF 2653]
 gi|306842009|ref|ZP_07474682.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp.
           BO2]
 gi|306843688|ref|ZP_07476288.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp.
           BO1]
 gi|23347545|gb|AAN29670.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella suis 1330]
 gi|148371973|gb|ABQ61952.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ovis ATCC 25840]
 gi|161335522|gb|ABX61827.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           canis ATCC 23365]
 gi|163673736|gb|ABY37847.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           suis ATCC 23445]
 gi|225617248|gb|EEH14293.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           ceti str. Cudo]
 gi|255999334|gb|ACU47733.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella microti CCM 4915]
 gi|260156202|gb|EEW91282.1| cationic amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|261300838|gb|EEY04335.1| cationic amino acid ABC transporter [Brucella neotomae 5K33]
 gi|261737938|gb|EEY25934.1| cationic amino acid ABC transporter [Brucella sp. F5/99]
 gi|261744479|gb|EEY32405.1| cationic amino acid ABC transporter [Brucella suis bv. 3 str. 686]
 gi|264662438|gb|EEZ32699.1| cationic amino acid ABC transporter [Brucella sp. 83/13]
 gi|306275998|gb|EFM57707.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp.
           BO1]
 gi|306287850|gb|EFM59270.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp.
           BO2]
 gi|306407285|gb|EFM63494.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella sp.
           NF 2653]
          Length = 343

 Score =  374 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 188/344 (54%), Positives = 250/344 (72%), Gaps = 3/344 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L    LF  +   +A  L D+K +GFL+CG+NTGL+GFA     G+W GFD
Sbjct: 1   MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F  
Sbjct: 61  VDYCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAG 120

Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           I Y+DGQGF++   K  GI+S  QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE+
Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEK 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +EE +AAY + RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD  W 
Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG +  + IG  LGL KDW  +
Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y  P+R
Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343


>gi|222085840|ref|YP_002544371.1| general L-amino acid ABC transporter [Agrobacterium radiobacter
           K84]
 gi|221723288|gb|ACM26444.1| general L-amino acid ABC transporter [Agrobacterium radiobacter
           K84]
          Length = 344

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 183/342 (53%), Positives = 267/342 (78%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L    L ++    +AS L D+K +GF++CG+NT L+GF++  A+G++ GFD
Sbjct: 4   MKKIALSAFLGAAALAYSVSGASASTLSDVKAKGFVQCGVNTALLGFSQPDASGNYSGFD 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD C+A+++A+F D +K++Y  L++K+RF ALQS +ID+LSRNT WTL R+ +LGL FRP
Sbjct: 64  VDMCKAVAAAVFGDVTKVKYTALSSKDRFTALQSGEIDLLSRNTTWTLNRDTALGLNFRP 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DGQGF++ K+  + S  +LSGA++CVQ+GTTTEL LADYFK++N++Y+P+VF+++E
Sbjct: 124 VTYYDGQGFMVRKELNVKSALELSGAAVCVQSGTTTELNLADYFKSNNLQYNPVVFDKLE 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY + RCD YT D S LY+L+LT   P ++V+LP+IISK PL PA+ QGD +W++I
Sbjct: 184 EVNAAYDSGRCDVYTTDQSGLYSLRLTLKNPDDNVVLPEIISKEPLGPAVRQGDDQWFDI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V+WT YA++ AEE GITQKN++++ K + NPD++RFLG ++ S +G  +GLT DW Y +I
Sbjct: 244 VTWTAYALINAEEFGITQKNVDEM-KSSANPDIKRFLGAEQGSTLGTDMGLTNDWAYNVI 302

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+FDRN+G  S LKI RG NALW+KGG+ YAPP+R
Sbjct: 303 KGVGNYGEVFDRNIGAGSPLKIARGLNALWNKGGIQYAPPVR 344


>gi|83648448|ref|YP_436883.1| amino acid ABC transporter periplasmic protein [Hahella chejuensis
           KCTC 2396]
 gi|83636491|gb|ABC32458.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Hahella chejuensis KCTC
           2396]
          Length = 339

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 170/342 (49%), Positives = 236/342 (69%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F  ++  L  +  T  +     L  +KK+GF++CG++TGL GF+     G+W G D
Sbjct: 1   MKKTFVSAVAALGFMTATGAAMADGTLDAVKKKGFVQCGVSTGLPGFSNPDDKGNWMGLD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A   D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F  
Sbjct: 61  VDLCRAVAAATLGDASKVKYIPLTAKERFTALQSGEIDLLSRNTTWTLTRDGSLGLNFAG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+ S  +L GA++C+QAGTTTEL LADYF+   MKY P+VF+  +
Sbjct: 121 VNYYDGQGFLVSKDLGVKSAKELDGAAVCIQAGTTTELNLADYFREFGMKYQPVVFDTSD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL++    P + ++LP++ISK PL P + QGD +W+NI
Sbjct: 181 QTVKGFEAGRCDVLTSDQSQLYALRIQLSNPDKAMVLPEVISKEPLGPVVRQGDDQWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+ +A +TAEELG++  N++++ K +TNP+VQR LG +     G+ LGL   W + I+
Sbjct: 241 VKWSLFAAITAEELGVSSDNVDKM-KSSTNPNVQRLLGAEAGQ--GKNLGLDDTWAFNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGEMF+RN+G  S L I RG NALW+KGGL YAPPIR
Sbjct: 298 KQVGNYGEMFERNVGKSSPLGIERGLNALWTKGGLQYAPPIR 339


>gi|256159474|ref|ZP_05457242.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           ceti M490/95/1]
 gi|256254760|ref|ZP_05460296.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           ceti B1/94]
 gi|261221938|ref|ZP_05936219.1| cationic amino acid ABC transporter [Brucella ceti B1/94]
 gi|265997901|ref|ZP_06110458.1| cationic amino acid ABC transporter [Brucella ceti M490/95/1]
 gi|260920522|gb|EEX87175.1| cationic amino acid ABC transporter [Brucella ceti B1/94]
 gi|262552369|gb|EEZ08359.1| cationic amino acid ABC transporter [Brucella ceti M490/95/1]
          Length = 343

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 186/344 (54%), Positives = 248/344 (72%), Gaps = 3/344 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L    LF  +   +A  L D+K +GFL+CG+NTGL+GFA     G+W GFD
Sbjct: 1   MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F  
Sbjct: 61  VDSCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAG 120

Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           I Y+DGQGF++   K   I+S  QLSGASICVQAG+TTEL +ADYF+A+ M+Y+P+VFE+
Sbjct: 121 INYYDGQGFMINSKKLADINSALQLSGASICVQAGSTTELNMADYFRANKMEYNPVVFEK 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +EE +AAY + RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD  W 
Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG +  + IG  LGL KDW  +
Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y  P+R
Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343


>gi|254709861|ref|ZP_05171672.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           pinnipedialis B2/94]
 gi|256031353|ref|ZP_05444967.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           pinnipedialis M292/94/1]
 gi|261317400|ref|ZP_05956597.1| cationic amino acid ABC transporter [Brucella pinnipedialis B2/94]
 gi|265988437|ref|ZP_06100994.1| cationic amino acid ABC transporter [Brucella pinnipedialis
           M292/94/1]
 gi|261296623|gb|EEY00120.1| cationic amino acid ABC transporter [Brucella pinnipedialis B2/94]
 gi|264660634|gb|EEZ30895.1| cationic amino acid ABC transporter [Brucella pinnipedialis
           M292/94/1]
          Length = 343

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 188/344 (54%), Positives = 250/344 (72%), Gaps = 3/344 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L    LF  +   +A  L D+K +GFL+CG+NTGL+GFA     G+W GFD
Sbjct: 1   MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNNKGEWSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F  
Sbjct: 61  VDYCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAG 120

Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           I Y+DGQGF++   K  GI+S  QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE+
Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEK 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +EE +AAY + RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD  W 
Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG +  + IG  LGL KDW  +
Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y  P+R
Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343


>gi|182678577|ref|YP_001832723.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182634460|gb|ACB95234.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 336

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 181/342 (52%), Positives = 240/342 (70%), Gaps = 6/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M+K    + L        +    A  L ++K RGFL CG N GL GF      G W GFD
Sbjct: 1   MFKSIVSAGL---FSLCVTTGALAGTLDEVKGRGFLNCGSNPGLAGFGLPDDKGQWVGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+++AIFDDP+K+++LPL+ K+RF ALQS +IDILSRNT WT  RE+  G  F  
Sbjct: 58  IDFCRAVAAAIFDDPTKVKFLPLSGKDRFTALQSGEIDILSRNTTWTQSREVGQGFLFTG 117

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           ITY+DGQGF+ H+K  ++S  +L+GASICVQ GTTTEL LAD+F+A+N++Y P+ F   +
Sbjct: 118 ITYYDGQGFMTHRKLNLTSALELAGASICVQQGTTTELNLADFFRANNLQYEPVNFATGD 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY   RCDA T D S LYA +     P +HV+LP+IISK PL P + QGD +W+N+
Sbjct: 178 EALKAYDTGRCDALTTDASGLYAQRAKLANPDDHVVLPEIISKEPLGPLVRQGDDQWFNL 237

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W H+A + AEE G+T KN+++ +K + +P+++R LG +   N GE LGLT+DW YRII
Sbjct: 238 VKWVHFAWLNAEEDGVTSKNLDEKTK-SESPEIKRLLGFE--GNFGEGLGLTRDWIYRII 294

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +H+GNYGE+FDRNLG  S+LKI RG N LW+KGGL YAPP+R
Sbjct: 295 KHVGNYGEVFDRNLGEGSKLKIKRGINNLWTKGGLHYAPPVR 336


>gi|254713861|ref|ZP_05175672.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           ceti M644/93/1]
 gi|254717082|ref|ZP_05178893.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           ceti M13/05/1]
 gi|261218893|ref|ZP_05933174.1| cationic amino acid ABC transporter [Brucella ceti M13/05/1]
 gi|261321608|ref|ZP_05960805.1| cationic amino acid ABC transporter [Brucella ceti M644/93/1]
 gi|260923982|gb|EEX90550.1| cationic amino acid ABC transporter [Brucella ceti M13/05/1]
 gi|261294298|gb|EEX97794.1| cationic amino acid ABC transporter [Brucella ceti M644/93/1]
          Length = 343

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 249/344 (72%), Gaps = 3/344 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L    LF  +   +A  L D+K +GFL+CG+NTGL+GFA     G+W GFD
Sbjct: 1   MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRA++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F  
Sbjct: 61  VDYCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAG 120

Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           I Y+DGQGF++   K  GI+S  QLSGASICVQ GTTTEL +ADYF+A+ M+Y+P+VFE+
Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQVGTTTELNMADYFRANKMEYNPVVFEK 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +EE +AAY + RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD  W 
Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG +  + IG  LGL KDW  +
Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y  P+R
Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAEWNKGGLQYGIPVR 343


>gi|146340850|ref|YP_001205898.1| putative amino-acid ABC transporter substrate-binding protein
           [Bradyrhizobium sp. ORS278]
 gi|146193656|emb|CAL77673.1| putative amino-acid ABC transporter, substrate-binding protein
           [Bradyrhizobium sp. ORS278]
          Length = 338

 Score =  372 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 174/342 (50%), Positives = 240/342 (70%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +      L L  +   S    A  L  +K RG L CG++ GL GF+     G+W G D
Sbjct: 1   MKRVTLALTLALAPVL-ASVGAQAETLKTVKDRGMLACGVSQGLPGFSNPDDKGNWTGLD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++AIF+DP+K++Y+PL+AK+RF ALQS ++D+LSRNT WTL R+ SLG  F  
Sbjct: 60  VDVCRAIAAAIFNDPTKVKYVPLSAKDRFTALQSGEVDVLSRNTTWTLSRDTSLGANFAG 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           ITY+DGQGF++ K   ++S  +L+ AS+CVQ GTTTE  LADYFKA+ MKY  I F   +
Sbjct: 120 ITYYDGQGFMVKKALKVNSALELNSASVCVQTGTTTEQNLADYFKANKMKYEVIAFAGAD 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY + RCD +T D+S LYA +L    P++HV+LP++ISK PL P +  GD +W++I
Sbjct: 180 ETVKAYESGRCDVFTTDVSGLYAERLKLANPADHVVLPEVISKEPLGPMVRHGDDQWFDI 239

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT + ++TAEE+G+TQ N+++++K +  PD +R  G D   N+GE LGLTKDW  RI+
Sbjct: 240 VKWTLFGLITAEEMGVTQANVDEMAK-SDKPDFKRAFGTD--GNLGEQLGLTKDWFSRIV 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGEM+DRN+G+ S+L+I RG N LW+KGGL YAPPIR
Sbjct: 297 KAVGNYGEMYDRNVGSGSKLQIARGLNQLWNKGGLQYAPPIR 338


>gi|158423209|ref|YP_001524501.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS
           571]
 gi|158330098|dbj|BAF87583.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS
           571]
          Length = 336

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 174/342 (50%), Positives = 239/342 (69%), Gaps = 6/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +     I    +L  T+ +  A  L D+K RG L CG++ GL GF+     G+WKG D
Sbjct: 1   MKRIL---IAVAGVLALTAGAAKAGTLDDVKARGALNCGVSQGLPGFSSPDDKGNWKGLD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFCRA+++AIF+DP+K+++ PL+AK+RF ALQS  ID+LSRNT WT+ R+ +LG  F  
Sbjct: 58  VDFCRAVAAAIFNDPNKVRFTPLSAKDRFTALQSGAIDLLSRNTTWTMSRDTTLGFNFAG 117

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGFI+ K   I S  +L+GASICVQAGTTTEL L D+F+A+NMKY  I F   +
Sbjct: 118 VMYYDGQGFIVRKSLNIKSAKELNGASICVQAGTTTELNLGDFFRANNMKYEVITFSTED 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY + RCD++T D S +YA+KL     ++HV+LP++ISK PL P +  GD +W+++
Sbjct: 178 ETVKAYESGRCDSFTSDQSQIYAIKLKLTNAADHVVLPELISKEPLGPLVRHGDDQWFDL 237

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT+YA++ +EELG++QK ++Q S  +TNP+++R LG D     GE +GLT DW  RII
Sbjct: 238 VKWTYYALLNSEELGVSQKTLDQ-SMTSTNPEIKRLLGTD--GKFGEGIGLTNDWVVRII 294

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+FDRN+G  S L I RG N LW+KGGL Y  PIR
Sbjct: 295 KAVGNYGEIFDRNVGTGSPLGIDRGENKLWNKGGLQYGMPIR 336


>gi|17987494|ref|NP_540128.1| general L-amino acid-binding periplasmic protein AAPJ precursor
           [Brucella melitensis bv. 1 str. 16M]
 gi|254689006|ref|ZP_05152260.1| general L-amino acid-binding periplasmic protein AAPJ precursor
           [Brucella abortus bv. 6 str. 870]
 gi|254693490|ref|ZP_05155318.1| general L-amino acid-binding periplasmic protein AAPJ precursor
           [Brucella abortus bv. 3 str. Tulya]
 gi|256044431|ref|ZP_05447335.1| general L-amino acid-binding periplasmic protein AAPJ precursor
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|256113275|ref|ZP_05454143.1| general L-amino acid-binding periplasmic protein AAPJ precursor
           [Brucella melitensis bv. 3 str. Ether]
 gi|256257256|ref|ZP_05462792.1| general L-amino acid-binding periplasmic protein AAPJ precursor
           [Brucella abortus bv. 9 str. C68]
 gi|260563783|ref|ZP_05834269.1| cationic amino acid ABC transporter [Brucella melitensis bv. 1 str.
           16M]
 gi|260754500|ref|ZP_05866848.1| cationic amino acid ABC transporter [Brucella abortus bv. 6 str.
           870]
 gi|260883528|ref|ZP_05895142.1| cationic amino acid ABC transporter [Brucella abortus bv. 9 str.
           C68]
 gi|261213748|ref|ZP_05928029.1| cationic amino acid ABC transporter [Brucella abortus bv. 3 str.
           Tulya]
 gi|265990852|ref|ZP_06103409.1| cationic amino acid ABC transporter [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265994687|ref|ZP_06107244.1| cationic amino acid ABC transporter [Brucella melitensis bv. 3 str.
           Ether]
 gi|297248104|ref|ZP_06931822.1| general L-amino acid transport system substrate-binding protein
           [Brucella abortus bv. 5 str. B3196]
 gi|17983192|gb|AAL52392.1| general l-amino acid-binding periplasmic protein aapj precursor
           [Brucella melitensis bv. 1 str. 16M]
 gi|260153799|gb|EEW88891.1| cationic amino acid ABC transporter [Brucella melitensis bv. 1 str.
           16M]
 gi|260674608|gb|EEX61429.1| cationic amino acid ABC transporter [Brucella abortus bv. 6 str.
           870]
 gi|260873056|gb|EEX80125.1| cationic amino acid ABC transporter [Brucella abortus bv. 9 str.
           C68]
 gi|260915355|gb|EEX82216.1| cationic amino acid ABC transporter [Brucella abortus bv. 3 str.
           Tulya]
 gi|262765800|gb|EEZ11589.1| cationic amino acid ABC transporter [Brucella melitensis bv. 3 str.
           Ether]
 gi|263001636|gb|EEZ14211.1| cationic amino acid ABC transporter [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|297175273|gb|EFH34620.1| general L-amino acid transport system substrate-binding protein
           [Brucella abortus bv. 5 str. B3196]
          Length = 343

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 249/344 (72%), Gaps = 3/344 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L    LF  +   +A  L D+K +GFL+CG+NTGL+GFA     G+W GFD
Sbjct: 1   MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRA++SAIF DP+K+++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F  
Sbjct: 61  VDYCRAVASAIFGDPTKVKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAG 120

Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           I Y+DGQGF++   K  GI+S  QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE+
Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEK 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +EE +AAY + RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD  W 
Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG +  + IG  LGL KDW  +
Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y  P+R
Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343


>gi|90424048|ref|YP_532418.1| lysine-arginine-ornithine-binding periplasmic protein
           [Rhodopseudomonas palustris BisB18]
 gi|90106062|gb|ABD88099.1| Lysine-arginine-ornithine-binding periplasmic protein
           [Rhodopseudomonas palustris BisB18]
          Length = 350

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 166/340 (48%), Positives = 237/340 (69%), Gaps = 3/340 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   +++   +   F + +  A  L  ++ RG L CG++ GL GF+     G+W G DVD
Sbjct: 14  KRVSLALSVAVAAGFLTQAAGAQTLKTVQDRGVLSCGVSQGLPGFSAPDDKGNWTGIDVD 73

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
            CRA+++A+F+DP+K++++PL+AK+RF ALQS +ID+LSRNT WT+ R+ SLG+ F  +T
Sbjct: 74  VCRAIAAAVFNDPTKVKFVPLSAKDRFTALQSGEIDVLSRNTTWTVSRDTSLGVNFTGVT 133

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+DGQGF++ K   ++S  +L+ ASICVQ GTT E  +ADYFK +NMKY  I F   +E 
Sbjct: 134 YYDGQGFLVRKALKVNSALELNSASICVQTGTTNEQNVADYFKGNNMKYEVIAFGTADEA 193

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             AY + RCD +T D+S LYAL+L    P++H +LP++ISK PL P +  GD +W++IV 
Sbjct: 194 VKAYESGRCDVFTSDVSQLYALRLKLATPADHAVLPEVISKEPLGPLVRHGDDQWFDIVK 253

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           WT +A++ AEELG+ QKN++  +K    P+++R  G D   N+GE LGLTKDW  RI++ 
Sbjct: 254 WTLFALLNAEELGVNQKNVDDQAKLDK-PELKRVFGTD--GNLGEQLGLTKDWVIRIVKA 310

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            GNYGE+FDRN+G  S+L I RG N LW+KGG+ YAPPIR
Sbjct: 311 TGNYGEIFDRNVGAGSKLGIARGLNQLWNKGGIQYAPPIR 350


>gi|261342745|ref|ZP_05970603.1| general amino acid ABC transporter, periplasmic binding protein
           [Enterobacter cancerogenus ATCC 35316]
 gi|288315398|gb|EFC54336.1| general amino acid ABC transporter, periplasmic binding protein
           [Enterobacter cancerogenus ATCC 35316]
          Length = 341

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 161/343 (46%), Positives = 236/343 (68%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    S+    +LF  +   +A   L  +KK+GF++CGI+ GL GF+   ANG + G 
Sbjct: 1   MKKTMIASLAAAGVLFAVASQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADANGKFTGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G++F 
Sbjct: 61  DVDVCRGVAAAVFGDDSKVKYTPLTAKERFTALQSGEVDMLSRNTTWTSSRDAGMGMSFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA++MKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANSMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD +W++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDEDWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GIT KN+++ + + + PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGITSKNVDEKAANPSTPDMSHLLGKE--GDFGKDLKLDNKWAYHI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 VKQVGNYGEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|311277770|ref|YP_003940001.1| extracellular solute-binding protein family 3 [Enterobacter cloacae
           SCF1]
 gi|308746965|gb|ADO46717.1| extracellular solute-binding protein family 3 [Enterobacter cloacae
           SCF1]
          Length = 341

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 165/343 (48%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    S +   +LF  +   +A      IKK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKTTIASFVAAGVLFAIASQAHAGATFDAIKKKGFVQCGISDGLPGFSYADADGKFTGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT  R+  +GL+F 
Sbjct: 61  DVDVCRGVAAAVFGDASKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGLSFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P+E V+LP++ISK PL P + +GD EW+ 
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSKPTEWVVLPEVISKEPLGPVVRRGDDEWFA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  KN+++ + + +NPD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSKNVDEKAANPSNPDMSHLLGKE--GDFGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+FDRN+G  S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYAEIFDRNVGADSPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|27379557|ref|NP_771086.1| ABC transporter amino acid-binding protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27352709|dbj|BAC49711.1| ABC transporter amino acid-binding protein [Bradyrhizobium
           japonicum USDA 110]
          Length = 338

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 171/320 (53%), Positives = 231/320 (72%), Gaps = 3/320 (0%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +A  L  +K RG L CG++ GL GF+     G+W G DVD CRA+++AIF+DP+K++++P
Sbjct: 22  DAQTLKTVKDRGTLSCGVSQGLPGFSAPDDKGNWTGLDVDVCRAIAAAIFNDPTKVKFVP 81

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
            +AK+RF ALQS +ID+LSRNT WT+ R+ SLG  F  +TY+DGQGF++ K   ++S  +
Sbjct: 82  TSAKDRFTALQSGEIDVLSRNTTWTISRDTSLGANFTGVTYYDGQGFMVKKSLKVNSALE 141

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L+ AS+CVQ GTTTE  LADYFKA+NMKY  I F   +E   AY A RCD +T D S LY
Sbjct: 142 LNSASVCVQTGTTTEQNLADYFKANNMKYEVIAFGTNDETVKAYEAGRCDVFTTDQSGLY 201

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           A +L    P++H++LP+IISK PL P +  GD +W++IV WT +A+VT EELG+T KN++
Sbjct: 202 ANRLKLANPNDHMVLPEIISKEPLGPMVRHGDDQWFDIVKWTLFALVTTEELGVTSKNVD 261

Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322
           + +K   +P+++R LG D   N GE LGLTKDW  RI++ +GNYGE+FDRN+G  S L I
Sbjct: 262 EKAK-LESPELKRVLGSD--GNFGEQLGLTKDWVVRIVKAVGNYGEVFDRNVGAGSPLAI 318

Query: 323 PRGYNALWSKGGLMYAPPIR 342
            RG N LW+KGGL YAPPIR
Sbjct: 319 NRGLNNLWNKGGLQYAPPIR 338


>gi|327479738|gb|AEA83048.1| extracellular solute-binding protein [Pseudomonas stutzeri DSM
           4166]
          Length = 342

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 165/325 (50%), Positives = 236/325 (72%), Gaps = 2/325 (0%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           +  +   + L  ++K+GF++CGI+ GL GF+   A G ++G DVD CRA+++A+F D +K
Sbjct: 20  SGLAQAGATLDAVQKKGFVQCGISDGLPGFSFADAKGQFQGIDVDVCRAVAAAVFGDATK 79

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++Y PL AKERF ALQS ++D+LSRNT WT  R+ ++GL F  +TY+DGQGF+++K+ G+
Sbjct: 80  VKYSPLTAKERFTALQSGEVDVLSRNTTWTSSRDAAMGLNFTGVTYYDGQGFLVNKELGV 139

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           SS  +L GA++C+QAGTTTEL L+DYF+A+  KY PI ++  +E   +  + RCD  T D
Sbjct: 140 SSAKELDGATVCIQAGTTTELNLSDYFRANGHKYTPITYDTSDESAKSLESGRCDVLTSD 199

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
            S LYA ++   +P ++V+LP++ISK PL PA+ QGD EW++IV WT +AM+ AEELG+T
Sbjct: 200 QSQLYAQRIKLAKPDDYVVLPEVISKEPLGPAVRQGDEEWFDIVRWTLFAMLNAEELGVT 259

Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317
             N+  ++K T NPDV R LG +     G+ L L KDW  +I++ +GNYGE+FDRN+G  
Sbjct: 260 SANVEDMAKSTKNPDVARLLGAE--GEYGKDLRLPKDWAVQIVKQVGNYGEIFDRNVGAG 317

Query: 318 SELKIPRGYNALWSKGGLMYAPPIR 342
           SELKI RG NALW+KGGL YAPP+R
Sbjct: 318 SELKIERGLNALWNKGGLQYAPPVR 342


>gi|91977030|ref|YP_569689.1| lysine-arginine-ornithine-binding periplasmic protein
           [Rhodopseudomonas palustris BisB5]
 gi|91683486|gb|ABE39788.1| Lysine-arginine-ornithine-binding periplasmic protein
           [Rhodopseudomonas palustris BisB5]
          Length = 338

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 171/342 (50%), Positives = 240/342 (70%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    + + +    F + S  A  L  +K RG L CG++ GL GF+     G+W G D
Sbjct: 1   MKRVSLAAAVAITA-CFAAQSAGAQTLKTVKDRGLLSCGVSQGLPGFSAPDDKGNWTGLD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++AIFDDPSK++++PL+AK+RF ALQS +ID+LSRNT WT+ R+ SLG+ F  
Sbjct: 60  VDLCRAVAAAIFDDPSKVKFVPLSAKDRFTALQSGEIDVLSRNTTWTVSRDTSLGVNFAG 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           ++Y+DGQGF++ K   ++S  +L+ ASICVQ GTT E  +ADYFK +NMKY  I F   +
Sbjct: 120 VSYYDGQGFLVKKALKVNSALELNSASICVQTGTTNEQNVADYFKGNNMKYEVIAFANAD 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY + RCD +T D+S LYA +L    P++HV+LP++ISK PL P +  GD +W++I
Sbjct: 180 EAIKAYESGRCDVFTSDVSQLYAQRLKVTTPADHVVLPEVISKEPLGPLVRHGDDQWFDI 239

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A+V AEELG+TQ N+ +++K +  P+++R  G D   N+GE LGLTKDW  RI+
Sbjct: 240 VKWTLFALVNAEELGVTQSNVGEMAK-SDKPELKRVFGSD--GNLGEQLGLTKDWVARIV 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +  GNYGE F+RN+G  S+L+I RG N LW+KGG+MYAPPIR
Sbjct: 297 KATGNYGESFERNVGTGSKLEIARGLNKLWNKGGIMYAPPIR 338


>gi|260596110|ref|YP_003208681.1| putative amino-acid ABC transporter-binding protein yhdW
           [Cronobacter turicensis z3032]
 gi|260215287|emb|CBA27219.1| Putative amino-acid ABC transporter-binding protein yhdW
           [Cronobacter turicensis z3032]
          Length = 353

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 162/343 (47%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++     LF  +   +A   L  +KK+GF++CGI+ GL GF+   A G + G 
Sbjct: 13  MKKMMIATLAAAGTLFAVANQAHAGATLDSVKKKGFVQCGISDGLPGFSYADAGGKFTGI 72

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G++F 
Sbjct: 73  DVDVCRGVAAAVFGDASKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDAGMGMSFT 132

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 133 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 192

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 193 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDEEWFS 252

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  KN++  + + + PD+   LG +   + G+ L L   W Y I
Sbjct: 253 IVRWTLFAMLNAEEMGIDSKNVDAKAANPSTPDMAHLLGKE--GDYGKDLKLDNKWAYNI 310

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNYGE+F+RN+G +S LKI RG N LW+KGG+ YAPP+R
Sbjct: 311 IKQVGNYGEIFERNVGQESPLKIKRGQNNLWNKGGIQYAPPVR 353


>gi|225852259|ref|YP_002732492.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           melitensis ATCC 23457]
 gi|256264234|ref|ZP_05466766.1| cationic amino acid ABC transporter [Brucella melitensis bv. 2 str.
           63/9]
 gi|225640624|gb|ACO00538.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           melitensis ATCC 23457]
 gi|263094479|gb|EEZ18301.1| cationic amino acid ABC transporter [Brucella melitensis bv. 2 str.
           63/9]
          Length = 343

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 248/344 (72%), Gaps = 3/344 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +L    LF  +   +A  L D+K +GFL+CG+NTGL+GFA     G+W GFD
Sbjct: 1   MKKTLMTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRA++SAIF DP+K+++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F  
Sbjct: 61  VDYCRAVASAIFGDPTKVKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAG 120

Query: 121 ITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
           I Y+DGQGF++   K  GI+S  QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P VFE+
Sbjct: 121 INYYDGQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPAVFEK 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +EE +AAY + RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD  W 
Sbjct: 181 IEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWA 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           ++V WTH A++ AEE GITQ N+ ++ K + NPD++R LG +  + IG  LGL KDW  +
Sbjct: 241 DVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVK 299

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y  P+R
Sbjct: 300 IIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 343


>gi|296104983|ref|YP_003615129.1| general L-amino acid transport system substrate-binding protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295059442|gb|ADF64180.1| general L-amino acid transport system substrate-binding protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 341

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 161/343 (46%), Positives = 234/343 (68%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    S+    +LF  +   +A   L  +KK+GF++CGI+ GL GF+   ANG + G 
Sbjct: 1   MKKTMIASLAAAGMLFAVAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADANGKFTGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G++F 
Sbjct: 61  DVDVCRGVAAAVFGDDSKVKYTPLTAKERFTALQSGEVDMLSRNTTWTSSRDAGMGMSFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD +W++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDEDWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI+ KN+++ +   + PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGISSKNVDEKAAKPSTPDMAHLLGTE--GDFGKDLKLDNKWAYHI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYAEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|299133835|ref|ZP_07027029.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Afipia sp. 1NLS2]
 gi|298591671|gb|EFI51872.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Afipia sp. 1NLS2]
          Length = 339

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 169/342 (49%), Positives = 238/342 (69%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   +F  ++  + L   S     + L  +++RG L CG++ GL GF+     G W G D
Sbjct: 1   MKYGWFGIVMTSVFLGSLSPVNAQATLKAVQERGVLSCGVSQGLPGFSAPDDTGKWSGLD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFCRAL++ + +DP K++++PL+AK+RF ALQS +ID+LSRNT W+L R+ SLGL F  
Sbjct: 61  VDFCRALAAVVLNDPLKVKFVPLSAKDRFTALQSGEIDVLSRNTTWSLSRDTSLGLNFTA 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K   ++S  +L+GAS+CVQ GTT E  LADYF+A+NMKY  + F   +
Sbjct: 121 VMYYDGQGFLVRKALKVNSALELNGASVCVQTGTTNEQNLADYFRANNMKYEVVAFSTAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY + RCD +T D+S LYA +L    P +HV+LP+IISK PL P +  GD +W++I
Sbjct: 181 ETIKAYESGRCDVFTSDVSQLYAERLKLTVPDDHVVLPEIISKEPLGPVVRHGDDQWFDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEEL +TQKN+ +++K +  P++ R LG D   N+GE LGLTKDW  RI+
Sbjct: 241 VKWTLFAMINAEELNVTQKNVGEMTK-SNKPEIARLLGTD--GNLGEQLGLTKDWVVRIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE FDRN+G  S+L+I RG N LW++GG+ YAPPIR
Sbjct: 298 KAVGNYGESFDRNVGAGSKLRISRGLNKLWNQGGIQYAPPIR 339


>gi|283836183|ref|ZP_06355924.1| general amino acid ABC transporter, periplasmic binding protein
           [Citrobacter youngae ATCC 29220]
 gi|291067534|gb|EFE05643.1| general amino acid ABC transporter, periplasmic binding protein
           [Citrobacter youngae ATCC 29220]
          Length = 341

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 160/343 (46%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    S+    +L   +   +A   L  +KK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMIIASLAAAGVLLAIANQAHAGATLDAVKKKGFVQCGISDGLPGFSYADASGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR ++SA+F D SK++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G++F 
Sbjct: 61  DVDVCRGVASAVFGDDSKVKYTPLTAKERFTALQSGEVDMLSRNTTWTSSRDAGMGMSFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+  KN+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGVNSKNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|209885181|ref|YP_002289038.1| general L-amino acid-binding periplasmic protein AapJ [Oligotropha
           carboxidovorans OM5]
 gi|209873377|gb|ACI93173.1| general L-amino acid-binding periplasmic protein AapJ [Oligotropha
           carboxidovorans OM5]
          Length = 338

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 172/342 (50%), Positives = 237/342 (69%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   +F  ++  +I+   +   +A  L  IK RG L CG++ GL GF+     G W G D
Sbjct: 1   MKYGWFGIVMTSLIVGGLA-PASAQTLKTIKDRGVLSCGVSQGLPGFSAPDDTGKWSGLD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFCRALS+AIF+DP K++++PL+AK+RF ALQS +ID+LSRNT W++ R+ SLGL F  
Sbjct: 60  VDFCRALSAAIFNDPLKVKFVPLSAKDRFTALQSGEIDVLSRNTTWSMSRDTSLGLNFTA 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K   ++S  +L+GAS+CVQ GTT E  LADYF+A+ MKY  + F   +
Sbjct: 120 VMYYDGQGFLVRKSLKVNSALELNGASVCVQTGTTNEQNLADYFRANGMKYEVVAFATAD 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY + RCDA+T D+S LYA +L    P +H +LPDIISK PL P +  GD +W++I
Sbjct: 180 ETMKAYESGRCDAFTSDVSQLYAERLKLTVPDDHAVLPDIISKEPLGPVVRHGDDQWFDI 239

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEEL +TQKN+  + K +  P++ R LG D   N GE LGLTKDW  RI+
Sbjct: 240 VKWTLFALLNAEELAVTQKNVGDMVK-SNKPEIARLLGSD--GNFGEQLGLTKDWVVRIV 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE FDRN+G  S+L+I RG N LW++GG+ YAPP+R
Sbjct: 297 KAVGNYGESFDRNVGAGSKLRISRGLNKLWNQGGIQYAPPVR 338


>gi|157148848|ref|YP_001456167.1| hypothetical protein CKO_04681 [Citrobacter koseri ATCC BAA-895]
 gi|157086053|gb|ABV15731.1| hypothetical protein CKO_04681 [Citrobacter koseri ATCC BAA-895]
          Length = 341

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    S+  + +L   +   +A   L  +KK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIASLAAVGVLLAVANQAHAGATLDAVKKKGFVQCGISDGLPGFSYADASGKFTGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G++F 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMSFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+ MKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSDPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           +V WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 VVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYAEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|146313341|ref|YP_001178415.1| extracellular solute-binding protein [Enterobacter sp. 638]
 gi|145320217|gb|ABP62364.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Enterobacter sp. 638]
          Length = 341

 Score =  367 bits (942), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 162/343 (47%), Positives = 231/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    S+    +LF  +   +A   L  +KK+GF++CGI+ GL GF+   ANG + G 
Sbjct: 1   MKKTMIASLAAAGMLFAVAGQAHAGATLDAVKKKGFVQCGISDGLPGFSYADANGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+ F 
Sbjct: 61  DVDVCRGVAAALFGDDTKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDAGMGMTFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+ MKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW +
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDEEWTS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  KN+++ +   + PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVKWTLFAMLNAEEMGINSKNVDEKAAAPSTPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+H+GNYGE+F RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKHVGNYGEIFARNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|92117599|ref|YP_577328.1| extracellular solute-binding protein [Nitrobacter hamburgensis X14]
 gi|91800493|gb|ABE62868.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Nitrobacter hamburgensis X14]
          Length = 344

 Score =  366 bits (939), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 171/347 (49%), Positives = 237/347 (68%), Gaps = 8/347 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M     V       L   S S   S      L  +K RG L CG++ GL GF+     G+
Sbjct: 1   MKCVLAVIFAIAAGLPLQSASAQESAKVKTTLEAVKTRGMLSCGVSQGLPGFSAPDDKGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           W G DVD CRA+++ +F+DP+K++++PL+AK+RF+ALQS +ID+LSRNT WTL R+ SLG
Sbjct: 61  WTGLDVDVCRAIAAVVFNDPTKVKFVPLSAKDRFIALQSGEIDVLSRNTTWTLSRDTSLG 120

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F  +TY+DGQGF++ K   ++S  +L+ AS+CVQ GTTTE  LADYFK++ MKY  I 
Sbjct: 121 ANFTGVTYYDGQGFLVRKSLKVNSALELNSASVCVQTGTTTEQNLADYFKSNKMKYEVIA 180

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F   +E   AY + RCD +T DIS LYA +L    P++H +LP++ISK PL P +  GD 
Sbjct: 181 FSTADETIKAYESGRCDVFTSDISQLYAERLKLSNPADHAVLPEVISKEPLGPMVRHGDD 240

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295
           +W+++V WT +AM+ AEELGITQKN+++++K + NP+++R  G D   N GE LG+TKDW
Sbjct: 241 QWFDLVKWTLFAMIDAEELGITQKNVDEMAK-SNNPELKRVFGTD--GNFGEQLGVTKDW 297

Query: 296 TYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             RI++ +GNYGE FDRN+G  S+L I RG N LW++GG+ YAPPIR
Sbjct: 298 VSRIVKAVGNYGESFDRNVGAGSKLGIARGLNRLWNQGGIQYAPPIR 344


>gi|260463341|ref|ZP_05811542.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Mesorhizobium opportunistum WSM2075]
 gi|259030931|gb|EEW32206.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Mesorhizobium opportunistum WSM2075]
          Length = 430

 Score =  365 bits (938), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 183/342 (53%), Positives = 261/342 (76%), Gaps = 3/342 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   + IL    L   + + +A+ L  +K +GF++CG++TGL GF+     GDW+G D D
Sbjct: 90  KHIAIGILGAAALGLMASAASATTLDTVKAKGFIQCGVSTGLAGFSAPDDKGDWQGIDAD 149

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           FCRA+++A+F D +K+++ PL+AKERF ALQS ++DILSRNT WT+ R+ +LGL F  +T
Sbjct: 150 FCRAVAAAVFGDGTKVKFTPLSAKERFTALQSGEVDILSRNTTWTINRDTALGLNFIGVT 209

Query: 123 YFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           Y+DGQGF++   K  G++S  QLSGA++CVQ+GTTTEL LADYFKA+ M+Y+P+VFE++E
Sbjct: 210 YYDGQGFMINAKKLPGVNSALQLSGAAVCVQSGTTTELNLADYFKANKMEYNPVVFEKLE 269

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY ++LT   P++HV+LP+IISK PL PA+ QGD +WY+I
Sbjct: 270 EVNAAYDAGRCDVYTTDQSGLYGIRLTLGSPADHVVLPEIISKEPLGPAVRQGDDQWYHI 329

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT++A++ AEELGIT+ N++++ K++ +P+++R LG +  + IG  LG++ DW   I+
Sbjct: 330 VKWTYFALLDAEELGITKANVDEM-KNSASPEIKRVLGQEADTKIGTDLGVSNDWVVNIV 388

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGEMFDRN+G+ S LKI RG NALW+KGGL YAPPIR
Sbjct: 389 KAVGNYGEMFDRNVGSGSPLKIARGINALWTKGGLQYAPPIR 430


>gi|13476741|ref|NP_108310.1| ABC transporter, amino acid binding protein [Mesorhizobium loti
           MAFF303099]
 gi|14027502|dbj|BAB53771.1| ABC transporter, amino acid binding protein [Mesorhizobium loti
           MAFF303099]
          Length = 342

 Score =  365 bits (936), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 184/342 (53%), Positives = 261/342 (76%), Gaps = 3/342 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   + IL    L F + + +A+ L  +K +GF++CG++TGL GF+     GDW+G D D
Sbjct: 2   KHIAIGILGAATLGFMASAASATTLDTVKAKGFIQCGVSTGLAGFSAPDDKGDWQGIDAD 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           FCRA+++A+F D +K+++ PL+AKERF ALQS ++DILSRNT WT+ R+ +LGL F   T
Sbjct: 62  FCRAVAAAVFGDGTKVKFTPLSAKERFTALQSGEVDILSRNTTWTINRDTALGLNFVGTT 121

Query: 123 YFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           Y+DGQGF++   K  G++S  QLSGA++CVQ+GTTTEL LADYFKA+ M+Y+P+VFE++E
Sbjct: 122 YYDGQGFMINAKKLPGVNSALQLSGAAVCVQSGTTTELNLADYFKANKMEYNPVVFEKLE 181

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY ++LT   P++HV+LP+IISK PL PA+ QGD +WY+I
Sbjct: 182 EVNAAYDAGRCDVYTTDQSGLYGIRLTLGSPADHVVLPEIISKEPLGPAVRQGDDQWYHI 241

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT++A++ AEELGIT+ N++++ K++ +P+++R LG +  + IG  LG++ DW   I+
Sbjct: 242 VKWTYFALLDAEELGITKANVDEM-KNSASPEIKRVLGQEADTKIGADLGVSNDWVVNIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGEMFDRN+G+ S LKI RG NALW+KGGL YAPPIR
Sbjct: 301 KAVGNYGEMFDRNVGSGSPLKIARGINALWTKGGLQYAPPIR 342


>gi|316934242|ref|YP_004109224.1| cationic amino acid ABC transporter periplasmic-binding protein
           [Rhodopseudomonas palustris DX-1]
 gi|315601956|gb|ADU44491.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rhodopseudomonas palustris DX-1]
          Length = 338

 Score =  365 bits (936), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 171/325 (52%), Positives = 236/325 (72%), Gaps = 3/325 (0%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           +  S +A  L  +K RG L CG++ GL GF+     G+W G DVD CRA+++AIFDDPSK
Sbjct: 17  SVSSADAQTLKTVKDRGMLSCGVSQGLPGFSSPDDKGNWTGLDVDVCRAIAAAIFDDPSK 76

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++++PL+AK+RF ALQS +ID+LSRNT WTL R+ SLG+ F  I+Y+DGQGF+  K   +
Sbjct: 77  VKFVPLSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGVNFAGISYYDGQGFMAKKALKV 136

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           +S  +L+GASICVQ GTT E  +ADYFK +NMKY  I F   +E   AY   RCD +T D
Sbjct: 137 NSALELNGASICVQTGTTNEQNVADYFKGNNMKYEVIAFANADEAVKAYETGRCDVFTSD 196

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
           +S LYA +L    P++H++LP++ISK PL P +  GD +W++IV WT + ++ AEELG+T
Sbjct: 197 VSQLYAQRLKLATPADHIVLPEVISKEPLGPLVRHGDDQWFDIVKWTLFGLINAEELGVT 256

Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317
           QKN+++++K +  P+++R  G D   N+GE LGLTKDW  RII+  GNYGE F+RN+G+ 
Sbjct: 257 QKNVDEMAK-SDKPELKRVFGTD--GNLGEQLGLTKDWVARIIKATGNYGESFERNVGSG 313

Query: 318 SELKIPRGYNALWSKGGLMYAPPIR 342
           S+L+I RG N LW+KGG+MYAPPIR
Sbjct: 314 SKLEIARGLNKLWNKGGIMYAPPIR 338


>gi|70728430|ref|YP_258179.1| general amino acid ABC transporter periplasmic binding protein
           [Pseudomonas fluorescens Pf-5]
 gi|68342729|gb|AAY90335.1| general amino acid ABC transporter, periplasmic binding protein
           [Pseudomonas fluorescens Pf-5]
          Length = 342

 Score =  365 bits (936), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 159/342 (46%), Positives = 230/342 (67%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    ++    +L  + F+   + L  ++K+GF++CG++ GL GF+   A G   G D
Sbjct: 3   MLKSTLAAVTAATVLGMSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDATGKILGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +ID+LSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDVLSRNTTWTSSRDAGMGLVFAG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++KK G+ S  +L GA+IC+QAGTTTEL ++DYF+ + +KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNKKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +  + RCD  T D S LYA +     P+++V+LP+ ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLESGRCDVLTSDKSQLYAQRSKLATPTDYVVLPETISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE G+T KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VKWTLFAMLNAEEAGVTSKNVEAEAKSTKNPDVARLLGAD--GEYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F++NLG  + L I RG NALW+ GG+ YAPP+R
Sbjct: 301 KQVGNYGEVFEKNLGKSTPLAIDRGLNALWNNGGIQYAPPVR 342


>gi|149376724|ref|ZP_01894482.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Marinobacter algicola
           DG893]
 gi|149358963|gb|EDM47429.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Marinobacter algicola
           DG893]
          Length = 343

 Score =  365 bits (936), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 163/344 (47%), Positives = 229/344 (66%), Gaps = 5/344 (1%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K   V    L  +F  S ++ A+ L  +K++G L+CG+ +GL GF++    G+W G
Sbjct: 3   MKNAKSIAVGAAMLCGVFTASVASAATTLESVKEKGHLQCGVTSGLPGFSQPDDKGNWTG 62

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            DVD CRA+++AIF D   +++ PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F
Sbjct: 63  IDVDTCRAVAAAIFGDAKAVEFTPLTAKERFTALQSGEIDMLSRNTTWTLTRDASLGLNF 122

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             + Y+DGQGF+++K  G+   +QL GA++C+QAGTTTEL L+DYF+A  M+Y PIVF+ 
Sbjct: 123 AGVNYYDGQGFLVNKGIGVDDATQLDGATVCIQAGTTTELNLSDYFRAKGMEYKPIVFDT 182

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            E+    + + RCD  T D S L AL+     P    ILP+ ISK PL P + QGD +W+
Sbjct: 183 SEQTVQGFASGRCDVLTSDRSQLAALRSKLSDPDSAKILPNTISKEPLGPVVRQGDDQWF 242

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           NIV W     + AEELG+T  N++ + K + NP++QR LG D   ++G  LGL  D+  +
Sbjct: 243 NIVKWVLSVQINAEELGVTSANVDDMLK-SDNPNIQRLLGTD--GDMGAKLGLPADFGAK 299

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            I+ +GNYGEM+DRN+G  + L + RG NALW++GG+MYAPP+R
Sbjct: 300 AIKQVGNYGEMYDRNVGPDTPLGLERGINALWTEGGVMYAPPVR 343


>gi|255264624|ref|ZP_05343966.1| glutamate/glutamine/aspartate/asparagine-binding protein
           bztAprecursor [Thalassiobium sp. R2A62]
 gi|255106959|gb|EET49633.1| glutamate/glutamine/aspartate/asparagine-binding protein
           bztAprecursor [Thalassiobium sp. R2A62]
          Length = 338

 Score =  365 bits (936), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 154/342 (45%), Positives = 218/342 (63%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+  L +  L     +     L D+K RG L CG+ TGLVGFA   A+G+W+GFD
Sbjct: 1   MKKSVFLGALTVAGLAAGMSAAA--TLDDVKARGTLNCGVTTGLVGFAAPDASGEWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VGVCRAVAAAVLGDSNAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF+  K+ G+SS   L GA++C+Q GTTTEL LAD+F+A+N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMAPKELGVSSAKDLDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD +T D S L A + T + P +HV+LP+I+SK PL P +  GD EW +I
Sbjct: 179 EAQQQYLAGACDVFTTDASGLAATRATFENPGDHVLLPEIVSKEPLGPLVRHGDNEWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A++TAEELG+T  NI ++S  T NP+V R LG +    +G  LGL   W    I
Sbjct: 239 VRWTLNALITAEELGVTSANIGELSAGTNNPEVNRLLGTE--GELGGMLGLDAAWAKNAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F++N+G  + + + RG NA+W++GGL+Y+PP R
Sbjct: 297 MAGGNYGEIFEKNIGENTPIGLARGLNAMWTEGGLIYSPPFR 338


>gi|304396995|ref|ZP_07378875.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
 gi|304355791|gb|EFM20158.1| extracellular solute-binding protein family 3 [Pantoea sp. aB]
          Length = 341

 Score =  364 bits (935), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 159/343 (46%), Positives = 228/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    L   +   +A   L  IKK+GF++CGI+ GL GF+   A G + G 
Sbjct: 1   MKKMMLSTLIAAASLVGLAQQAHAGTTLDAIKKKGFVQCGISDGLPGFSYADAGGKFTGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA ++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G  F 
Sbjct: 61  DVDVCRATAAAVFGDATKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDGGMGFLFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ HKK G+ S  +L GA++C+Q+GT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHKKAGLKSAKELDGATVCIQSGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P + ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDDFIVLPEVISKEPLGPLVRRGDDDWFT 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W+ YAM+ AEE+GI  KN++Q++   T PD+  FLG +   + G+ L L   W Y I
Sbjct: 241 IVKWSLYAMLNAEEMGINSKNVDQMTAKPTTPDMAHFLGAE--GDFGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNY E FDRN+G  S LKI RG NALW++GG+ YAPP+R
Sbjct: 299 VKQVGNYQESFDRNVGKDSALKIARGQNALWNQGGIQYAPPVR 341


>gi|330969254|gb|EGH69320.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 342

 Score =  364 bits (935), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 161/342 (47%), Positives = 226/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L        +   + L  IKK+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++ K G+ S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++++LP++ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGQDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG  + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|330950965|gb|EGH51225.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae Cit 7]
          Length = 342

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 160/342 (46%), Positives = 227/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L     T  +   + L  I+K+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFIQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++ K G+ S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++++LP++ISK PL P + +GD +W++I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG  + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|126668363|ref|ZP_01739321.1| Lysine-arginine-ornithine-binding periplasmic protein [Marinobacter
           sp. ELB17]
 gi|126627179|gb|EAZ97818.1| Lysine-arginine-ornithine-binding periplasmic protein [Marinobacter
           sp. ELB17]
          Length = 340

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 170/343 (49%), Positives = 237/343 (69%), Gaps = 4/343 (1%)

Query: 1   MYKDFFVSILCLIILF-FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   +  +   +     + S  A+ L D+K RG ++CG+ +GL GF++   NG+W G 
Sbjct: 1   MKKQLLLVAIATTLGGTLMAGSVQAATLDDVKSRGHVQCGVTSGLPGFSQPDENGNWTGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA+++A+F    K+Q+ PL AKERF ALQS +IDILSRNT WTL R+ SLGL F 
Sbjct: 61  DVDTCRAVAAAVFGSADKVQFTPLTAKERFTALQSGEIDILSRNTTWTLTRDASLGLNFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y+DGQGF++ K  G+ +  QL GA+IC+QAGTTTEL LADYF+   MK++P+VF+  
Sbjct: 121 GTNYYDGQGFLVSKSLGVDNAEQLDGATICIQAGTTTELNLADYFRTKGMKFNPLVFDTS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E+  + + A RCD  T D S L AL+   + PS  VILP+IISK PL P + QGD +W+N
Sbjct: 181 EQTVSGFAAGRCDVLTSDRSQLAALRSKLEDPSSAVILPNIISKEPLGPVVRQGDDQWFN 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +  + AEELG+TQ N++ + K +TNP++QR LG   + ++GE LG+  D+ +RI
Sbjct: 241 IVKWTLFVQINAEELGVTQANVSDM-KSSTNPEIQRLLGT--TGDMGEKLGVPADFGFRI 297

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNYGEM++RN+G  + L + RG NALW+ GG+MYAPP+R
Sbjct: 298 IQTVGNYGEMYERNVGPDTPLGLDRGLNALWNNGGIMYAPPVR 340


>gi|319784340|ref|YP_004143816.1| cationic amino acid ABC transporter periplasmic binding protein
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317170228|gb|ADV13766.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 342

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 183/342 (53%), Positives = 261/342 (76%), Gaps = 3/342 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   + IL    L   + + +A+ L  +K +GF++CG++TGL GF+     GDW+G D D
Sbjct: 2   KHIAIGILGAATLGLMASAASAATLDTVKAKGFIQCGVSTGLAGFSAPDDKGDWQGIDAD 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           FCRA+++A+F D S++++ PL+AKERF ALQS +IDILSRNT WT+ R+ +LGL F  +T
Sbjct: 62  FCRAVAAAVFGDGSRVKFTPLSAKERFTALQSGEIDILSRNTTWTINRDTALGLNFIGVT 121

Query: 123 YFDGQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           Y+DGQGF++   K  G++S  QLSGA++CVQ+GTTTEL LADYFKA+ M+Y+P+VFE++E
Sbjct: 122 YYDGQGFMINAKKLPGVNSALQLSGAAVCVQSGTTTELNLADYFKANKMEYNPVVFEKLE 181

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E++AAY A RCD YT D S LY ++LT   P++HV+LP+IISK PL PA+ QGD +WY+I
Sbjct: 182 EVNAAYDAGRCDVYTTDQSGLYGIRLTLGSPADHVVLPEIISKEPLGPAVRQGDDQWYHI 241

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT++A++ AEELGIT+ N++++ K++ +P+++R LG +  + IG  LG++ DW   I+
Sbjct: 242 VKWTYFALLQAEELGITKANVDEM-KNSASPEIKRVLGQEADTKIGTDLGVSNDWVVNIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGEMF+RN+G+ S LKI RG NALW+KGGL YAPPIR
Sbjct: 301 KAVGNYGEMFERNVGSGSPLKIARGINALWTKGGLQYAPPIR 342


>gi|289678218|ref|ZP_06499108.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           syringae FF5]
 gi|330975706|gb|EGH75772.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 342

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 161/342 (47%), Positives = 227/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L        +   + L  IKK+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++ K G++S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNNKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++++LP++ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGQDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG  + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|66044325|ref|YP_234166.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           syringae B728a]
 gi|63255032|gb|AAY36128.1| extracellular solute-binding protein, family 3 [Pseudomonas
           syringae pv. syringae B728a]
          Length = 342

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 161/342 (47%), Positives = 226/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L        +   + L  IKK+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++ K G+ S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++++LP++ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGKDLKLEKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG  + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|85716216|ref|ZP_01047190.1| extracellular solute-binding protein, family 3 [Nitrobacter sp.
           Nb-311A]
 gi|85696888|gb|EAQ34772.1| extracellular solute-binding protein, family 3 [Nitrobacter sp.
           Nb-311A]
          Length = 344

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 167/323 (51%), Positives = 232/323 (71%), Gaps = 3/323 (0%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +   + L  +K+RG L CG+  GL GF+     G+W G DVD CRA+++ +F+DPSK++
Sbjct: 25  SAKAKTTLDVVKERGVLSCGVTQGLPGFSTPDDKGNWTGLDVDICRAIAAVVFNDPSKVK 84

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           ++PL+AK+RF+ALQ  +ID+LSR+T WTL R+ SLG  F  +TY+DGQGF++ K   ++S
Sbjct: 85  FVPLSAKDRFIALQWGEIDVLSRDTSWTLSRDTSLGGNFTGVTYYDGQGFLVRKSLKVNS 144

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
             +L+ AS+CVQ GTT+E  LADYFK++ MKY  I F   +E   AY + RCD +T DIS
Sbjct: 145 ALELNSASVCVQTGTTSEQNLADYFKSNKMKYEVIAFGTADETLKAYESGRCDVFTSDIS 204

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            LYA +L    P++H +LP++ISK PL P + QGD +W++IV WT +AM+ AEELGITQK
Sbjct: 205 QLYAQRLKLLNPADHAVLPEVISKEPLGPMVRQGDDQWFDIVKWTLFAMINAEELGITQK 264

Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319
           N+++ +K + NP+++R LG D   N GE LG+TKDW  RII+ +GNYGE FDRN+G  S 
Sbjct: 265 NVDEKAK-SENPEIKRVLGTD--GNFGEQLGVTKDWVSRIIKAVGNYGEAFDRNVGAGSP 321

Query: 320 LKIPRGYNALWSKGGLMYAPPIR 342
           L I RG N LW++GG+ YAPPIR
Sbjct: 322 LGITRGLNRLWNQGGIQYAPPIR 344


>gi|320327255|gb|EFW83269.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330882636|gb|EGH16785.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 342

 Score =  364 bits (933), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 160/342 (46%), Positives = 228/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L     T  +   + L  I+K+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++ K G+ S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++++LP++ISK PL P + +GD +W++I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG+ + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGDGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|257487410|ref|ZP_05641451.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|289628605|ref|ZP_06461559.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289647200|ref|ZP_06478543.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. 2250]
 gi|298485800|ref|ZP_07003879.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|302188404|ref|ZP_07265077.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. syringae 642]
 gi|298159826|gb|EFI00868.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|330867828|gb|EGH02537.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330887729|gb|EGH20390.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. mori str. 301020]
 gi|330988313|gb|EGH86416.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. lachrymans str. M301315]
 gi|331008998|gb|EGH89054.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 342

 Score =  364 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 160/342 (46%), Positives = 227/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L     T  +   + L  I+K+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++ K G+ S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++++LP++ISK PL P + +GD +W++I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG  + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|309785598|ref|ZP_07680229.1| general L-amino acid-binding periplasmic protein aapJ [Shigella
           dysenteriae 1617]
 gi|308926718|gb|EFP72194.1| general L-amino acid-binding periplasmic protein aapJ [Shigella
           dysenteriae 1617]
          Length = 341

 Score =  364 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 231/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL  F+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAIANQAHAGATLDAVQKKGFVQCGISDGLPRFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDNTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|71735932|ref|YP_273398.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|71556485|gb|AAZ35696.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 342

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 160/342 (46%), Positives = 228/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L     T  +   + L  I+K+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAVVTALAAFGVTGVANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++ K G+ S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++++LP++ISK PL P + +GD +W++I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG+ + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGDGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|75675721|ref|YP_318142.1| extracellular solute-binding protein [Nitrobacter winogradskyi
           Nb-255]
 gi|74420591|gb|ABA04790.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Nitrobacter winogradskyi Nb-255]
          Length = 346

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 165/348 (47%), Positives = 238/348 (68%), Gaps = 11/348 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNA--------SILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           K  F +I  ++       ++          + L  +K RG L CG++ GL GF+     G
Sbjct: 2   KCVFTAIFAIVAGISLQPASAQEQESAKAKTTLEAVKARGALSCGVSQGLPGFSAPDDKG 61

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           +W G DVD CRA+++ +F+DP+K++++PL+AK+RF+ALQS +ID+LSR+T WTL R+ SL
Sbjct: 62  NWTGLDVDICRAIAAVVFNDPTKVKFVPLSAKDRFIALQSGEIDVLSRDTTWTLSRDTSL 121

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           G  F  +TY+DGQGF++ K   ++S  +L+ AS+CVQ GTT E  LADYFK++ MKY  I
Sbjct: 122 GANFTGVTYYDGQGFLIRKSLKVNSALELNSASVCVQTGTTNEQNLADYFKSNKMKYEVI 181

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            F   +E   AY + RCD +T DIS LYA +L    P++H +LP++ISK P A  +  GD
Sbjct: 182 AFSTADETIKAYESGRCDVFTSDISQLYAQRLKLINPADHAVLPEVISKEPHATMVRHGD 241

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294
            +W+++V WT +AM+ AEELGIT+KN++++++ + NP+++R  G D   N GE LG+TKD
Sbjct: 242 DQWFDLVKWTLFAMINAEELGITKKNVDEMAR-SENPELKRIFGTD--GNFGEQLGVTKD 298

Query: 295 WTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           W  RII+ +GNYGE FDRN+G  S L I RG N LW++GG+MYAPPIR
Sbjct: 299 WVSRIIKAVGNYGESFDRNVGAGSPLGIARGLNKLWNQGGIMYAPPIR 346


>gi|330963203|gb|EGH63463.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 342

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 163/342 (47%), Positives = 228/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L     T  +   + L  I K+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAIVTALTAFGVTGAANAGTTLDAIVKKGFVQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+ ++GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDSAMGLMFAG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++KK G++S  +L GA+IC+QAGTTTEL ++DYF+++N+KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNKKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNNLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++V+LP++ISK PL P + + D EW+ I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYVVLPEVISKEPLGPVVRKNDPEWFAI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VKWTLFAMLNAEEAKITSKNVEAEAKATKNPDVARMLGAD--GTYGKDLNLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG  + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|83592340|ref|YP_426092.1| lysine-arginine-ornithine-binding periplasmic protein
           [Rhodospirillum rubrum ATCC 11170]
 gi|83575254|gb|ABC21805.1| Lysine-arginine-ornithine-binding periplasmic protein
           [Rhodospirillum rubrum ATCC 11170]
          Length = 340

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 169/343 (49%), Positives = 229/343 (66%), Gaps = 4/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFST-NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K               S S   AS L  +K RG + CG+N GL GFA     G W G 
Sbjct: 1   MKKMIAALAAFGAAGVIASGSAMAASTLDTVKSRGEVTCGVNNGLPGFALPDDKGHWTGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA+++A+F D  K++++PLNAKERF ALQS +ID+LSRNT WT  R+ SLGL F 
Sbjct: 61  DVDICRAVAAAVFGDAKKVKFVPLNAKERFTALQSGEIDVLSRNTTWTQTRDASLGLIFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DGQGF++ K+ G+SS  +L+GASIC+Q+GTTTEL LADYF+A+ M Y P+VF+  
Sbjct: 121 GVNYYDGQGFMVKKELGVSSAKELNGASICIQSGTTTELNLADYFRANAMTYSPVVFDTS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           ++    +   RCD  T D S LYAL++  + P   ++LP++ISK PL P + QGD +W N
Sbjct: 181 DQTVQGFAGGRCDVLTSDQSQLYALRIKLEDPKSAIVLPEVISKEPLGPMVRQGDDQWLN 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W+ +A + AEELG+T  N ++V   T + +V+R LG +    +G+ LGL  DW Y I
Sbjct: 241 IVRWSLFAQLNAEELGVTSANADEVKAGT-DQNVKRLLGTE--GEMGKQLGLGNDWAYAI 297

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGEMF+RN+G  S L+I RG NALW+KGG+ YAPPIR
Sbjct: 298 VKQVGNYGEMFERNIGKGSPLEIERGLNALWNKGGIQYAPPIR 340


>gi|90419549|ref|ZP_01227459.1| lysine-arginine-ornithine-binding periplasmic protein [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90336486|gb|EAS50227.1| lysine-arginine-ornithine-binding periplasmic protein [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 334

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 170/337 (50%), Positives = 244/337 (72%), Gaps = 3/337 (0%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
             ++L L +        +A  L  +K RG L+CG+NTGL GFA     G W+G D+D+C+
Sbjct: 1   MTAVLGLTVAGVAVSGASAQTLQTVKDRGVLRCGVNTGLPGFASQNDQGAWQGLDIDYCK 60

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A+++A+F DPSK++Y PL+A +RF ALQ+ ++D+L+RNT WT+ R+ +LGL F  + Y+D
Sbjct: 61  AIAAAVFGDPSKVEYSPLSAVQRFPALQNNEVDVLARNTTWTMDRDTTLGLTFAGVNYYD 120

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           GQGF++ K  G++S  +LSGA++CVQ+GTTTEL LADYF+ +NM+Y+P+V E   ++++A
Sbjct: 121 GQGFMVKKDLGVNSALELSGATVCVQSGTTTELNLADYFRTNNMEYNPVVIESQSDVNSA 180

Query: 186 YRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTH 245
           Y + RCD  T D S L A +L      EH ILP+IISK PL PA+ QGDTEW+N+V WTH
Sbjct: 181 YDSGRCDVLTTDASGLAASRLEMGNADEHTILPEIISKEPLGPAVRQGDTEWFNVVKWTH 240

Query: 246 YAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305
            A++ AEELG+TQ+N+  + K + NP+++R LG DK  N GE++GL++DW   II+ +GN
Sbjct: 241 NALLNAEELGVTQENVEDM-KTSENPEIRRLLGEDK--NFGESIGLSQDWAVNIIKAVGN 297

Query: 306 YGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           YGE+F+RN+G  + L+I RG NALW+KGGL Y  PIR
Sbjct: 298 YGEIFERNIGVDTPLEIARGQNALWTKGGLQYGMPIR 334


>gi|28868466|ref|NP_791085.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213967086|ref|ZP_03395235.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato T1]
 gi|301386368|ref|ZP_07234786.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato Max13]
 gi|302060650|ref|ZP_07252191.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato K40]
 gi|302133060|ref|ZP_07259050.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|28851704|gb|AAO54780.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213927928|gb|EEB61474.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. tomato T1]
 gi|331015252|gb|EGH95308.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 342

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 163/342 (47%), Positives = 228/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L     T  +   + L  I K+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAIVTALAAFGVTGAANAGATLDAIVKKGFVQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+ ++GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDSAMGLMFAG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++KK G++S  +L GA+IC+QAGTTTEL ++DYF+++N+KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNKKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNNLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++V+LP++ISK PL P + + D EW+ I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYVVLPEVISKEPLGPVVRKNDPEWFAI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VKWTLFAMLNAEEAKITSKNVEAEAKATKNPDVARMLGAD--GTYGKDLNLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG  + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|330808961|ref|YP_004353423.1| putative amino acid ABC transporter, periplasmic component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327377069|gb|AEA68419.1| putative amino acid ABC transporter, periplasmic component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 346

 Score =  362 bits (930), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 163/348 (46%), Positives = 230/348 (66%), Gaps = 8/348 (2%)

Query: 1   MY--KDFFVSILCLIILFFTS----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M   K    S   +  L   S     +   + L ++KK+GF++CGI+ GL GF+   A G
Sbjct: 1   MKQEKKLLKSASTVACLTLGSVFAITAHAGATLDNVKKKGFVQCGISDGLPGFSYADAKG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           ++ GFDVD CRA+++A+F D  K++Y  L AKERF ALQS ++D+LSR+T WT  R+ ++
Sbjct: 61  EFHGFDVDVCRAVAAAVFGDAKKVKYTQLTAKERFTALQSGEVDMLSRSTTWTSSRDGAM 120

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           G+ F  + Y+DGQGF+++KK G+ S  +L GA+ C+QAGT TEL L+DYF+++ MKY PI
Sbjct: 121 GIQFTNVAYYDGQGFLVNKKLGVKSARELDGATFCIQAGTVTELNLSDYFRSNGMKYTPI 180

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            F+  +E   A  + RCD  T D S LY  +L    P +  +LPD+ISK PL PA+ +GD
Sbjct: 181 TFDTSDESFKALESGRCDVLTTDQSQLYGQRLKLATPDDFAVLPDVISKEPLTPAVRRGD 240

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294
            +W+ +V W+  AM+ AEELGIT KN+  + K + NPD+ R LG +    +G+ L L  D
Sbjct: 241 EDWFTVVRWSLAAMLNAEELGITSKNVADMVKSSKNPDIARLLGTE--GALGKDLNLPND 298

Query: 295 WTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           W  +II  +GNYGE F+RNLG  S++KI RG NALWS+GGL YAPP+R
Sbjct: 299 WAAKIIAQVGNYGESFERNLGTGSDMKIKRGLNALWSQGGLQYAPPVR 346


>gi|330873115|gb|EGH07264.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
          Length = 342

 Score =  362 bits (930), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 163/342 (47%), Positives = 228/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L     T  +   + L  I K+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAIVTALTAFGVTGAANAGATLDAIVKKGFVQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+ ++GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDSAMGLMFAG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++KK G++S  +L GA+IC+QAGTTTEL ++DYF+++N+KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNKKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNNLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++V+LP++ISK PL P + + D EW+ I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYVVLPEVISKEPLGPVVRKNDPEWFAI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VKWTLFAMLNAEEAKITSKNVEAEAKATKNPDVARMLGAD--GTYGKDLNLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG  + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|311695087|gb|ADP97960.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [marine bacterium
           HP15]
          Length = 347

 Score =  362 bits (930), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 163/340 (47%), Positives = 232/340 (68%), Gaps = 3/340 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   + I   +  F  + +  A+ L ++K++G L+CG+ +GL GF++    G+W G DVD
Sbjct: 11  KSIALGIALAVGTFSATGAMAATTLENVKEKGHLQCGVTSGLPGFSQPDEKGNWTGIDVD 70

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
            CRA+++AIF D + +++ PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F  + 
Sbjct: 71  TCRAVAAAIFGDANAVEFTPLTAKERFTALQSGEIDMLSRNTTWTLTRDASLGLNFAGVN 130

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+DGQGF+++K  G+   +QL GA+IC+QAGTTTEL L+DYF+A  M++ PIVF+  E+ 
Sbjct: 131 YYDGQGFLINKGIGVDDATQLDGATICIQAGTTTELNLSDYFRAKGMEFKPIVFDTSEQT 190

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
              + A RCD  T D S L AL+     PS   ILP+ ISK PL P + QGD +W+NIV 
Sbjct: 191 VQGFAAGRCDVLTSDRSQLAALRSKLSDPSSAKILPNTISKEPLGPVVRQGDDQWFNIVK 250

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           W  +A + AEELG+T  N + + K + NP++QR LG D   ++G  LGL  D+ Y+ ++ 
Sbjct: 251 WVLFAQINAEELGVTSANADDMLK-SDNPNIQRLLGTD--GDMGAKLGLPDDFGYQAVKL 307

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGEM+DRN+G  + L + RG NALW++GG+MYAPP+R
Sbjct: 308 VGNYGEMYDRNVGPDTPLGLDRGINALWTEGGIMYAPPVR 347


>gi|320325827|gb|EFW81888.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. glycinea str. B076]
          Length = 342

 Score =  362 bits (930), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 160/342 (46%), Positives = 228/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L     T  +   + L  I+K+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++ K G+ S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++++LP++ISK PL P + +GD +W++I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEDWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKLTKNPDVARMLGAD--GTYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG+ + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGDGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|330962155|gb|EGH62415.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 342

 Score =  362 bits (929), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 161/342 (47%), Positives = 227/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L     T  +   + L  I+K+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAVVTALAAFGVTGAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++ K G+ S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++++LP++ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKATKNPDVARMLGAD--GTYGKDLKLPKDWVVKIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RNLG  + LKI RG NALW+ GG+ YAPPIR
Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 342


>gi|330999032|ref|ZP_08322757.1| general L-amino acid-binding periplasmic protein AapJ
           [Parasutterella excrementihominis YIT 11859]
 gi|329575774|gb|EGG57300.1| general L-amino acid-binding periplasmic protein AapJ
           [Parasutterella excrementihominis YIT 11859]
          Length = 340

 Score =  362 bits (929), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 149/342 (43%), Positives = 227/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +      L  + L   + +    +L  +K    + CG+NT   GF+   + G+W G D
Sbjct: 1   MNQTILAGALSAVSLSLAAPAFAGPVLDKVKANDVVVCGVNTAAPGFSNADSKGNWTGLD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRAL++A+  D +K++++PLN+ +RF ALQ+ ++D+L+RNT W L R+ SLG  F  
Sbjct: 61  VDYCRALAAAVLGDANKVKFVPLNSPQRFSALQAGEVDVLARNTTWNLTRDASLGAVFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ KK  + S  QL+GA+ICVQ+GT++E ++ADYFK+H MKY  ++F+  E
Sbjct: 121 TNYYDGQGFLVPKKLNVKSAKQLNGATICVQSGTSSEPSVADYFKSHGMKYKAVLFDTTE 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A+ + RC  YT D+S L   +     P ++VILP++ISK PL P++ +GD EW+ I
Sbjct: 181 ATQGAFLSGRCQVYTTDMSDLAGARTKAANPDDYVILPEVISKEPLGPSVRRGDNEWFQI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             W   A + AEE GITQ N +++ K +T+P+V+R LG     ++G+ LGL KDW+YRI+
Sbjct: 241 ARWVLNAFIEAEEKGITQANADELRKTSTDPNVKRLLG--SGEDMGKLLGLDKDWSYRIV 298

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+RNLG ++ L +PRG N  W+ GG++YAPP+R
Sbjct: 299 KQVGNYGESFERNLGPKTPLALPRGINNQWTNGGILYAPPVR 340


>gi|220926164|ref|YP_002501466.1| family 3 extracellular solute-binding protein [Methylobacterium
           nodulans ORS 2060]
 gi|219950771|gb|ACL61163.1| extracellular solute-binding protein family 3 [Methylobacterium
           nodulans ORS 2060]
          Length = 337

 Score =  362 bits (929), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 179/339 (52%), Positives = 242/339 (71%), Gaps = 3/339 (0%)

Query: 5   FFVSI-LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
              ++ L L +   +  +   + L  IK++GF+ CG N GL GF    A G W G DVDF
Sbjct: 1   MIAALGLSLSVCLLSGAAQAQATLASIKQKGFIACGSNPGLAGFGVPDAQGRWTGLDVDF 60

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
           CRAL++AIF+D ++++++PL+AK+RF ALQS ++D+LSRNT WT+ R+ SLGL F  + +
Sbjct: 61  CRALAAAIFNDTTRVRFIPLSAKDRFTALQSGEVDVLSRNTTWTMSRDTSLGLDFPSVNF 120

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           +DGQGF++ KK G++S  QL GASIC Q GTTTEL LADYF+A+ +KY  + F   +E  
Sbjct: 121 YDGQGFMVKKKLGVTSAKQLDGASICTQQGTTTELNLADYFRANKLKYEAVAFATADETF 180

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            AY + RCDA+T D S LYA +L    P ++V+LP++ISK PL PA+  GD++W +IV W
Sbjct: 181 KAYDSGRCDAFTTDASGLYAERLRASNPDDNVVLPEVISKEPLGPAVRHGDSQWADIVRW 240

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303
           TH+AM+ AEE GITQ N++Q+ K T NPDV+R LG +     GE +GLT DW YRII+ +
Sbjct: 241 THFAMLNAEEAGITQANVDQMLKSTDNPDVKRILGTE--GKFGEGIGLTNDWAYRIIKLV 298

Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GNYGE+F+RN+G  S+LKI RG NALWSKGGL Y PPIR
Sbjct: 299 GNYGEVFERNVGQGSQLKIQRGVNALWSKGGLQYGPPIR 337


>gi|312962948|ref|ZP_07777434.1| extracellular solute-binding protein, family 3 [Pseudomonas
           fluorescens WH6]
 gi|311282717|gb|EFQ61312.1| extracellular solute-binding protein, family 3 [Pseudomonas
           fluorescens WH6]
          Length = 342

 Score =  362 bits (929), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 159/344 (46%), Positives = 230/344 (66%), Gaps = 4/344 (1%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K    ++   +IL     +   + L  I+K+GF++CG++ GL GF    + G   G
Sbjct: 1   MKHLKTSLAAVSVAVILGLAGSAHAGTTLDAIQKKGFIQCGVSDGLPGFGVPDSQGKMTG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            DVD C A+++A+F D SK+++  L AKERF ALQS +ID++SRNT WT  R+  +GL F
Sbjct: 61  IDVDVCHAVAAAVFGDASKVKFTQLTAKERFTALQSGEIDLISRNTTWTSSRDSGMGLVF 120

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             +TY+DG GF+++ K G+++  QL+GA++C+QAGTTTEL ++DYF+ H MKY PI F+ 
Sbjct: 121 TGVTYYDGIGFLVNNKLGVTAAKQLNGATVCIQAGTTTELNVSDYFRTHGMKYTPITFDT 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            +E      A RCD  T D S LYA ++    P E V+LP++ISK PL P + +GD EW+
Sbjct: 181 ADESAKGLEAGRCDVLTTDQSGLYAQRIKMAHPEEFVVLPEVISKEPLGPLVRKGDDEWF 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           +IV WT +AM+ AEE+GIT +N+ + ++ + NPDV R LG D     G+ L L +DW  +
Sbjct: 241 SIVKWTLFAMLNAEEMGITSQNVEEQARTSKNPDVARLLGAD--GEYGKDLKLRRDWVVQ 298

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I++ +GNYGE+F+RN+G  S LKI RG NALW+ GG+ YAPP+R
Sbjct: 299 IVKQVGNYGEVFERNIGQGSVLKIKRGLNALWNNGGIQYAPPVR 342


>gi|254780170|ref|YP_003064583.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Candidatus Liberibacter asiaticus str. psy62]
 gi|254039847|gb|ACT56643.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Candidatus Liberibacter asiaticus str. psy62]
          Length = 342

 Score =  362 bits (928), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 342/342 (100%), Positives = 342/342 (100%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD
Sbjct: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP
Sbjct: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE
Sbjct: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI
Sbjct: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII
Sbjct: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR
Sbjct: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342


>gi|229592512|ref|YP_002874631.1| putative ABC transporter periplasmic solute binding protein
           [Pseudomonas fluorescens SBW25]
 gi|229364378|emb|CAY52154.1| Putative ABC transport system, periplasmic solute binding protein
           [Pseudomonas fluorescens SBW25]
          Length = 342

 Score =  362 bits (928), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 161/341 (47%), Positives = 227/341 (66%), Gaps = 2/341 (0%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
           +K    +I     L   S +     L  I+K+GF++CG++ GL GF    +NG   G DV
Sbjct: 4   FKTTLAAIGATAALGLASTAQAGVTLDAIQKKGFIQCGVSDGLPGFGVPDSNGKMTGIDV 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D C A+++A+F D SK+++  L AKERF ALQS +ID++SRNT WT  R+  +GL F  +
Sbjct: 64  DVCHAVAAAVFGDASKVKFTQLTAKERFTALQSGEIDMISRNTTWTSSRDSGMGLVFTGV 123

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           TY+DG GF+++ K G++   QL GA++C+QAGTTTEL ++DYF+ + MKY PI F+  +E
Sbjct: 124 TYYDGIGFLVNNKLGVTGAKQLDGATVCIQAGTTTELNVSDYFRTNGMKYTPITFDTADE 183

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
                 A RCD  T D S LYA ++    P E V+LP++ISK PL P + +GD EW++IV
Sbjct: 184 SAKGLEAGRCDVLTTDQSGLYAQRIKMAHPDEFVVLPEVISKEPLGPLVRKGDDEWFSIV 243

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
            WT +AM+ AEE+GIT +N+ + +K T NPD+ R LG D     G+ L L KDW  +I++
Sbjct: 244 KWTLFAMLNAEEMGITSQNVEEQAKTTKNPDIARLLGAD--GEYGKDLKLRKDWVVQIVK 301

Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            +GNYGE+F+RN+G  S LKI RG NALW+ GG+ YAPP+R
Sbjct: 302 QVGNYGEVFERNIGQGSVLKIKRGLNALWNNGGIQYAPPVR 342


>gi|317049795|ref|YP_004117443.1| family 3 extracellular solute-binding protein [Pantoea sp. At-9b]
 gi|316951412|gb|ADU70887.1| extracellular solute-binding protein family 3 [Pantoea sp. At-9b]
          Length = 341

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 164/343 (47%), Positives = 231/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    LF  +   +A   L  IKK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMLSTLVAAASLFAVAQQAHAGTTLDAIKKKGFVQCGISDGLPGFSYADASGKFTGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA ++A+F D SK++Y PL AKERF ALQS ++DILSRNT WT  R+  +G  F 
Sbjct: 61  DVDVCRAAAAAVFGDASKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDGGMGFLFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ HKK G+ S  +L GA++C+QAGT TEL +ADYFKA+NM+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHKKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P E ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDDDWFT 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W+ YAM+ AEE+GI  KN++Q++   +NPD+   LG +   + G+ L L   W + I
Sbjct: 241 IVKWSLYAMLNAEEMGINSKNVDQLAAKPSNPDMAHLLGAE--GDFGKDLKLDNKWAFNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E FDRN+G  S LKI RG NALW++GG+ YAPP+R
Sbjct: 299 IKQVGNYQESFDRNVGKDSALKIARGQNALWNQGGIQYAPPVR 341


>gi|294852106|ref|ZP_06792779.1| general L-amino acid transport system substrate-binding protein
           [Brucella sp. NVSL 07-0026]
 gi|294820695|gb|EFG37694.1| general L-amino acid transport system substrate-binding protein
           [Brucella sp. NVSL 07-0026]
          Length = 338

 Score =  360 bits (925), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 185/339 (54%), Positives = 247/339 (72%), Gaps = 3/339 (0%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
              +L    LF  +   +A  L D+K +GFL+CG+NTGL+GFA     G+W GFDVD+CR
Sbjct: 1   MTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFDVDYCR 60

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A++SAIF DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F  I Y+D
Sbjct: 61  AVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYD 120

Query: 126 GQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           GQGF++   K  GI+S  QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE++EE +
Sbjct: 121 GQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEKIEEAN 180

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           AAY + RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD  W ++V W
Sbjct: 181 AAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRW 240

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303
           TH A++ AEE GITQ N+ ++ K + NPD++R LG +  + IG  LGL KDW  +II+ +
Sbjct: 241 THNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGV 299

Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GNYGE+F+RN+G+ S LKI RG N  W+KGGL Y  P+R
Sbjct: 300 GNYGEIFERNIGSGSPLKIARGLNVQWNKGGLQYGIPVR 338


>gi|188532411|ref|YP_001906208.1| General L-amino ABC transporter binding protein [Erwinia
           tasmaniensis Et1/99]
 gi|188027453|emb|CAO95300.1| General L-amino ABC transporter binding protein [Erwinia
           tasmaniensis Et1/99]
          Length = 341

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 160/343 (46%), Positives = 228/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    LF  +   +A   L  IKK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMLSTLVSAAALFSIANQAHAGTTLDAIKKKGFVQCGISDGLPGFSYADASGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA ++A+  D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G  F 
Sbjct: 61  DVDVCRAAAAAVLGDAGKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDGGMGFIFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H+K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P + ++LP++ISK PL P + + D +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDDFIVLPEVISKEPLGPVVRRDDNDWFT 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W+ YAM+ AEE+GIT KN++ +S   +NPD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVKWSLYAMLNAEEMGITSKNVDSLSAKPSNPDMSHLLGAE--GDFGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+FDRN+G  S+LKI RG NALW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYQEVFDRNVGKDSQLKIARGQNALWNNGGIQYAPPVR 341


>gi|307942366|ref|ZP_07657717.1| general L-amino acid-binding periplasmic protein AapJ [Roseibium
           sp. TrichSKD4]
 gi|307774652|gb|EFO33862.1| general L-amino acid-binding periplasmic protein AapJ [Roseibium
           sp. TrichSKD4]
          Length = 371

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 176/342 (51%), Positives = 242/342 (70%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F   +L    +   + S +A+ L D+K +GF++CG++ GL GF+   + G+W G D
Sbjct: 34  MSKKFLPLVLGA-AMGVAATSASAATLDDVKAKGFVQCGVSQGLPGFSNPDSQGNWTGLD 92

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++AIFDD + +++ PL+AKERF ALQS +ID+LSRNT WT+ R+ SLGL F  
Sbjct: 93  VDVCRAMAAAIFDDVNAVKFTPLSAKERFTALQSGEIDVLSRNTTWTMTRDTSLGLNFAG 152

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G++S  +LSGAS+C   GTTTEL +ADYF+A+NM Y  + FE+ +
Sbjct: 153 VNYYDGQGFMVRKDLGVTSALELSGASVCTNTGTTTELNVADYFRANNMPYEIVAFEKAD 212

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E+ AAY A RCD YT D S LYA +L    P +H++LP+IISK PL P + QGD +W+N+
Sbjct: 213 EVVAAYDAGRCDVYTTDASGLYAQRLKLTNPGDHMVLPEIISKEPLGPVVRQGDDQWFNL 272

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  AM+ AEELG+T  N++ + K + NP V+R LG +     GE +GLT DW  RII
Sbjct: 273 VKWTLNAMINAEELGVTSANVDDM-KGSDNPSVKRLLGTE--GAYGENIGLTNDWAARII 329

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +H+GNYGE FD N+G  + L I RG NALWSKGG++YAPP+R
Sbjct: 330 KHVGNYGESFDANVGPDTPLGIARGVNALWSKGGVLYAPPVR 371


>gi|254512097|ref|ZP_05124164.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Rhodobacteraceae
           bacterium KLH11]
 gi|221535808|gb|EEE38796.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Rhodobacteraceae
           bacterium KLH11]
          Length = 346

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 153/342 (44%), Positives = 222/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + +  +      + +  A  + D+K RG L CG++TGLVGFA   ANG W+GFD
Sbjct: 9   MKKSVILGVATIA--GLAAGAAAAGTVDDVKARGKLNCGVSTGLVGFAAPDANGVWQGFD 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+LSRNT WT  R+  L   F  
Sbjct: 67  VALCRAVAAAVLGDANAVEFVPTTTKTRFTALASGEIDMLSRNTTWTYSRDADLKFEFTG 126

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+ S  +L GA +C+Q GTTTEL LAD+F+++N+ Y P+  E   
Sbjct: 127 VNYYDGQGFMVPKALGVGSAKELDGARVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 186

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D SAL + + T + P EH++LP+IISK PL P +  G+ EW ++
Sbjct: 187 EAQQQYLAGACDVYTTDASALASTRATFENPDEHILLPEIISKEPLGPLVRHGENEWGDV 246

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A++TAEELG+T  NI+++S  + NP+V R LG +   N+GE +GL  DW  R I
Sbjct: 247 VRWTLNALITAEELGVTSANIDEMSAGSNNPEVDRLLGTE--GNLGEMMGLDADWAARAI 304

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +  GNYGE+F +N+G ++ + + RG NA W++GGL+Y+PP R
Sbjct: 305 KAGGNYGELFAKNIGEETPIGLARGLNAQWTEGGLLYSPPFR 346


>gi|170743936|ref|YP_001772591.1| cationic amino acid ABC transporter periplasmic binding protein
           [Methylobacterium sp. 4-46]
 gi|168198210|gb|ACA20157.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Methylobacterium sp. 4-46]
          Length = 340

 Score =  360 bits (923), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 177/342 (51%), Positives = 239/342 (69%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +      L   +      +   + L  IK++GF+ CG N GL GF    A G W G D
Sbjct: 1   MKRIIAALALTASVCLTAGAAQAQATLASIKQKGFIACGSNPGLAGFGVPDAQGRWTGLD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFCRAL++A+F+D +K++++PL+AK+RF ALQS ++D+LSRNT WT+ R+ +LGL F  
Sbjct: 61  VDFCRALAAAVFNDTTKVRFIPLSAKDRFTALQSGEVDVLSRNTTWTMSRDTALGLDFPA 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + ++DGQGF++ KK G++S  QL GASIC Q GTTTEL LADYF+A+ +KY  + F   +
Sbjct: 121 VNFYDGQGFMVKKKLGVTSAKQLDGASICTQQGTTTELNLADYFRANKLKYEVVAFATSD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY + RCDA+T D S LYA +L    P ++++LP++ISK PL PA+  GD++W +I
Sbjct: 181 ETFKAYDSGRCDAFTTDASGLYAERLRAANPDDNIVLPEVISKEPLGPAVRHGDSQWADI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WTHYAM+ AEE GITQ N++Q+ K T NPDV+R LG +     GE +GL+ DW YRII
Sbjct: 241 VRWTHYAMLNAEEAGITQANVDQMVKATDNPDVKRILGTE--GKFGEGIGLSNDWAYRII 298

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F+RN+G  S LKI RG NALWSKGGL Y PPIR
Sbjct: 299 KLVGNYGEVFERNVGQGSPLKIQRGVNALWSKGGLQYGPPIR 340


>gi|56695433|ref|YP_165781.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Ruegeria pomeroyi
           DSS-3]
 gi|56677170|gb|AAV93836.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Ruegeria pomeroyi
           DSS-3]
          Length = 380

 Score =  359 bits (921), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 155/342 (45%), Positives = 221/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L +    +    A  + D+K RG L CG+ TGLVGFA   +NG+WKGFD
Sbjct: 43  MKKSVFLG--ALTVAGMAAGVAAAGTMDDVKARGKLNCGVTTGLVGFAAPDSNGEWKGFD 100

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S ++D+L+RNT WT  R++ L   F  
Sbjct: 101 VALCRAVAAAVLGDGNAVEFVPTTGKTRFTALASGEVDMLARNTTWTFSRDVDLKFEFVG 160

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS  +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+  E   
Sbjct: 161 VNYYDGQGFMVPKSLGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 220

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T + P +HV+LP+IISK PL P +  GD EW ++
Sbjct: 221 EAQQQYLAGACDVYTTDASGLAATRATFENPGDHVLLPEIISKEPLGPLVRHGDHEWGDV 280

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A+V+AEE+GIT  NI+++S  T NP++ R LG +    +GE LGL  +W  R I
Sbjct: 281 VRWTLNALVSAEEMGITSANIDEMSAGTNNPEINRILGSE--GTLGEMLGLDAEWAKRAI 338

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +  GNYGE+F +N+G  + + + RG NA W+ GGL+Y+PP R
Sbjct: 339 KVGGNYGEVFAQNIGESTPIGLARGLNAQWTDGGLLYSPPFR 380


>gi|306841324|ref|ZP_07474033.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           sp. BO2]
 gi|306288627|gb|EFM59963.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           sp. BO2]
          Length = 339

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 167/342 (48%), Positives = 228/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKTVWGALLAAGFALSVQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK + +   D+  PDV+RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-EADLDSRKPDVRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|259906955|ref|YP_002647311.1| General L-amino ABC transporter binding protein [Erwinia pyrifoliae
           Ep1/96]
 gi|224962577|emb|CAX54032.1| General L-amino ABC transporter binding protein [Erwinia pyrifoliae
           Ep1/96]
 gi|283476749|emb|CAY72585.1| putative ABC transport system, periplasmic component [Erwinia
           pyrifoliae DSM 12163]
 gi|310766170|gb|ADP11120.1| General L-amino ABC transporter binding protein [Erwinia sp.
           Ejp617]
          Length = 341

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 159/343 (46%), Positives = 228/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    LF  +   +A   L  IKK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMLSTLVTAAALFTLANQAHAGTTLDAIKKKGFIQCGISDGLPGFSYADASGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA ++A+  D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G  F 
Sbjct: 61  DVDVCRAAAAAVLGDAGKVKYTPLTAKERFTALQSGEVDILSRNTTWTSARDGGMGFIFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H+K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P + ++LP++ISK PL P + + D +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDDFIVLPEVISKEPLGPVVRRDDDDWFT 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W+ +AM+ AEE+GIT KN++ +S   +NPD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVKWSLFAMLNAEEMGITSKNVDSMSAKPSNPDMAHLLGAE--GDFGKDLKLGNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+FDRN+G  S+LKI RG NALW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYQEVFDRNVGKDSQLKIARGQNALWNNGGIQYAPPVR 341


>gi|322834718|ref|YP_004214745.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
 gi|321169919|gb|ADW75618.1| extracellular solute-binding protein family 3 [Rahnella sp. Y9602]
          Length = 341

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 229/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++        +   +A   L  +KK+GF++CGI+ GL GF+   + G + G 
Sbjct: 1   MKKILLSTLIAAASFVTLAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADSKGKFTGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA+++A+F D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G+ F 
Sbjct: 61  DVDVCRAVAAAVFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMIFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H+K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCLQAGTDTELNVADYFKANKMTYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P E ++LP++ISK PL P + +GD +W  
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWLA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W+ +AM+ AEE+G+T +N+++++ + T PD+   LG  K+   G  L +  DW  +I
Sbjct: 241 IVRWSLFAMLNAEEMGVTSQNVDKLAANPTTPDMSNLLG--KTGTYGADLKVPNDWVVKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE F+RN+G  SELKI RG NALW+KGG+ YAPP+R
Sbjct: 299 VKQVGNYGESFERNVGQGSELKIKRGQNALWNKGGIQYAPPVR 341


>gi|254712708|ref|ZP_05174519.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           ceti M644/93/1]
 gi|254715778|ref|ZP_05177589.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           ceti M13/05/1]
 gi|261217539|ref|ZP_05931820.1| extracellular solute-binding protein family 3 [Brucella ceti
           M13/05/1]
 gi|261320414|ref|ZP_05959611.1| extracellular solute-binding protein family 3 [Brucella ceti
           M644/93/1]
 gi|260922628|gb|EEX89196.1| extracellular solute-binding protein family 3 [Brucella ceti
           M13/05/1]
 gi|261293104|gb|EEX96600.1| extracellular solute-binding protein family 3 [Brucella ceti
           M644/93/1]
          Length = 339

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 226/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SA YA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASAFYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PD++RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|90578887|ref|ZP_01234697.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Vibrio angustum S14]
 gi|90439720|gb|EAS64901.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Vibrio angustum S14]
          Length = 342

 Score =  359 bits (920), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 160/341 (46%), Positives = 231/341 (67%), Gaps = 2/341 (0%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
                 + L      F + +   + L  + K+G+++CG++ GL GF+   A G W+G DV
Sbjct: 4   KLSVVFAALASSTALFAANANAEATLDKVMKQGYVQCGVSAGLPGFSNPNAKGQWEGLDV 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +FC+A+++A   D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F  +
Sbjct: 64  EFCQAIAAATIGDKSKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLNFTGV 123

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y+DGQGF++ K  GI S  +L GA++CVQ+GTTTEL LADYF+ + M Y P+VF+   +
Sbjct: 124 NYYDGQGFMVKKDMGIKSAKELDGAAVCVQSGTTTELNLADYFRVNGMTYKPVVFDTAPQ 183

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
               + + RCD  T D S LYAL+L    P+  V+LP+IISK PL P + QGD +W+N+V
Sbjct: 184 TSKGFDSGRCDVLTTDQSGLYALRLNLKDPNSAVVLPEIISKEPLGPVVRQGDDQWFNVV 243

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
            WT + M+ AEE  +T  N+++++K++ +P+++R +G+D     G+ LGL  DW Y+II+
Sbjct: 244 RWTLFTMINAEEFNVTSANVDKLAKESKDPNIRRLIGLD--GPKGKGLGLKDDWGYQIIK 301

Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            +GNYGE F+R +G  S LKI RG NALW+ GG+ YAPPIR
Sbjct: 302 QVGNYGESFERTVGEGSPLKIKRGLNALWTNGGIQYAPPIR 342


>gi|89073072|ref|ZP_01159619.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Photobacterium sp. SKA34]
 gi|89051290|gb|EAR56746.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Photobacterium sp. SKA34]
          Length = 342

 Score =  359 bits (920), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 161/341 (47%), Positives = 232/341 (68%), Gaps = 2/341 (0%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
                 + L      F + +   + L  + K+G+++CG++ GL GF+   A G W+G DV
Sbjct: 4   KLSVVFAALASSTALFAANANAEATLDKVMKQGYVQCGVSAGLPGFSNPNAKGQWEGLDV 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +FC+A+++A   D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F  +
Sbjct: 64  EFCQAIAAATIGDKSKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLNFTGV 123

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y+DGQGF++ K  GI+S  +L GA++CVQ+GTTTEL LADYF+ + M Y P+VF+   +
Sbjct: 124 NYYDGQGFMVKKDMGITSAKELDGAAVCVQSGTTTELNLADYFRVNGMTYKPVVFDTAPQ 183

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
               + + RCD  T D S LYAL+L    PS  V+LP+IISK PL P + QGD +W+N+V
Sbjct: 184 TSKGFDSGRCDVLTTDQSGLYALRLNLKDPSSAVVLPEIISKEPLGPVVRQGDDQWFNVV 243

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
            WT + M+ AEE  +T  N+++++K++ +P+++R +G+D     G+ LGL  DW Y+II+
Sbjct: 244 RWTLFTMINAEEFNVTSANVDKLAKESKDPNIRRLIGLD--GPKGKGLGLKDDWGYQIIK 301

Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            +GNYGE F+R +G  S LKI RG NALW+ GG+ YAPPIR
Sbjct: 302 QVGNYGESFERTVGEGSPLKIKRGLNALWTNGGIQYAPPIR 342


>gi|148557994|ref|YP_001257868.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella ovis ATCC 25840]
 gi|225629405|ref|ZP_03787438.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           ceti str. Cudo]
 gi|225686709|ref|YP_002734681.1| amino-acid ABC transporter-binding protein yhdW [Brucella
           melitensis ATCC 23457]
 gi|254705588|ref|ZP_05167416.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           pinnipedialis M163/99/10]
 gi|254710821|ref|ZP_05172632.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           pinnipedialis B2/94]
 gi|256015709|ref|YP_003105718.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella microti CCM 4915]
 gi|256043818|ref|ZP_05446739.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|256058889|ref|ZP_05449103.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           neotomae 5K33]
 gi|256157396|ref|ZP_05455314.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           ceti M490/95/1]
 gi|256253625|ref|ZP_05459161.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           ceti B1/94]
 gi|256262158|ref|ZP_05464690.1| solute-binding protein/glutamate receptor [Brucella melitensis bv.
           2 str. 63/9]
 gi|260167705|ref|ZP_05754516.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella sp. F5/99]
 gi|260564999|ref|ZP_05835484.1| solute-binding protein/glutamate receptor [Brucella melitensis bv.
           1 str. 16M]
 gi|261220761|ref|ZP_05935042.1| extracellular solute-binding protein [Brucella ceti B1/94]
 gi|261312993|ref|ZP_05952190.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis M163/99/10]
 gi|261318389|ref|ZP_05957586.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis B2/94]
 gi|261322825|ref|ZP_05962022.1| extracellular solute-binding protein [Brucella neotomae 5K33]
 gi|261757141|ref|ZP_06000850.1| solute-binding protein/glutamate receptor [Brucella sp. F5/99]
 gi|265990242|ref|ZP_06102799.1| extracellular solute-binding protein family 3 [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|265995884|ref|ZP_06108441.1| extracellular solute-binding protein [Brucella ceti M490/95/1]
 gi|294853902|ref|ZP_06794574.1| general L-amino acid transport system substrate-binding protein
           [Brucella sp. NVSL 07-0026]
 gi|148369279|gb|ABQ62151.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella ovis ATCC 25840]
 gi|225615901|gb|EEH12950.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           ceti str. Cudo]
 gi|225642814|gb|ACO02727.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           melitensis ATCC 23457]
 gi|255998369|gb|ACU50056.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella microti CCM 4915]
 gi|260152642|gb|EEW87735.1| solute-binding protein/glutamate receptor [Brucella melitensis bv.
           1 str. 16M]
 gi|260919345|gb|EEX85998.1| extracellular solute-binding protein [Brucella ceti B1/94]
 gi|261297612|gb|EEY01109.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis B2/94]
 gi|261298805|gb|EEY02302.1| extracellular solute-binding protein [Brucella neotomae 5K33]
 gi|261302019|gb|EEY05516.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis M163/99/10]
 gi|261737125|gb|EEY25121.1| solute-binding protein/glutamate receptor [Brucella sp. F5/99]
 gi|262550181|gb|EEZ06342.1| extracellular solute-binding protein [Brucella ceti M490/95/1]
 gi|263000911|gb|EEZ13601.1| extracellular solute-binding protein family 3 [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|263091858|gb|EEZ16180.1| solute-binding protein/glutamate receptor [Brucella melitensis bv.
           2 str. 63/9]
 gi|294819557|gb|EFG36557.1| general L-amino acid transport system substrate-binding protein
           [Brucella sp. NVSL 07-0026]
 gi|326411105|gb|ADZ68169.1| amino-acid ABC transporter-binding protein yhdW [Brucella
           melitensis M28]
 gi|326554396|gb|ADZ89035.1| amino-acid ABC transporter-binding protein yhdW [Brucella
           melitensis M5-90]
          Length = 339

 Score =  359 bits (920), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PD++RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|192291210|ref|YP_001991815.1| extracellular solute-binding protein family 3 [Rhodopseudomonas
           palustris TIE-1]
 gi|192284959|gb|ACF01340.1| extracellular solute-binding protein family 3 [Rhodopseudomonas
           palustris TIE-1]
          Length = 353

 Score =  359 bits (920), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 169/356 (47%), Positives = 241/356 (67%), Gaps = 17/356 (4%)

Query: 1   MYK-DFFVSILCLIILFFTSFSTNAS-------------ILGDIKKRGFLKCGINTGLVG 46
           M +    V++   + L                        L  +++ G L CG++ GL G
Sbjct: 1   MKRVSILVALAIAVGLSPQVAGAQNPKAGSTAGAEKKKTTLEIVRENGALSCGVSQGLPG 60

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F+     G+W G DVD CRA+++A+FDDPSK++++PL+AK+RF ALQS +ID+LSRNT W
Sbjct: 61  FSAPDDKGNWAGLDVDVCRAIAAAVFDDPSKVKFVPLSAKDRFTALQSGEIDVLSRNTTW 120

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           TL R+ SLG++F  ++Y+DGQGF+  K   ++S  +L+GASICVQ GTT E  +ADYFK 
Sbjct: 121 TLSRDTSLGVSFAGVSYYDGQGFMAKKSLKVNSALELNGASICVQTGTTNEQNVADYFKG 180

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
           +NMKY  I F   +E   AY + RCD +T D+S LYA +L    P++H +LP++ISK PL
Sbjct: 181 NNMKYEVIAFANADEAVKAYESGRCDVFTSDVSQLYAQRLKLATPADHAVLPEVISKEPL 240

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIG 286
            P +  GD +W++IV WT +A+V AEELG+TQKN+++++K +  P+++R  G D   N+G
Sbjct: 241 GPLVRHGDDQWFDIVKWTLFALVNAEELGVTQKNVDEMAK-SDKPELKRVFGTD--GNLG 297

Query: 287 EALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           E LGLTKDW  RI++  GNYGE F+RN+G+ S+L+I RG N LW+KGG+MYAPPIR
Sbjct: 298 EQLGLTKDWVARIVKATGNYGESFERNVGSGSKLEIARGLNKLWNKGGIMYAPPIR 353


>gi|296272121|ref|YP_003654752.1| cationic amino acid ABC transporter periplasmic binding protein
           [Arcobacter nitrofigilis DSM 7299]
 gi|296096296|gb|ADG92246.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Arcobacter nitrofigilis DSM 7299]
          Length = 338

 Score =  358 bits (919), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 173/340 (50%), Positives = 228/340 (67%), Gaps = 3/340 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K      L +  L   S  ++A  L    K G L CG+NTGL GFA   ++G WKG DVD
Sbjct: 2   KLLKTLSLSIAALAIASTVSSADTLDTTIKNGKLSCGLNTGLPGFAAPDSDGVWKGIDVD 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
            CRA+++A+  D +K++Y  LNAKERF ALQS +ID+L+RNT WT  R+ SLGL F  + 
Sbjct: 62  VCRAVAAAVLGDATKVKYAHLNAKERFTALQSGEIDVLARNTTWTATRDTSLGLNFTGVN 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+DGQGF++ KK G+ S  +L GA+ C+QAGTTTEL L DYFK+HNMKY PI ++   + 
Sbjct: 122 YYDGQGFLVSKKLGVKSAKELDGATFCIQAGTTTELNLTDYFKSHNMKYTPITYDTSAQT 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
              +   RCDA T D S LYAL+     PS  ++LP+IISK PL P + QGD +W+NIV 
Sbjct: 182 IQGFEEGRCDALTSDSSQLYALRTQLKNPSSAIVLPEIISKEPLGPVVRQGDDKWFNIVK 241

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           WT  AM+ AE+LG+  KN++++ K +TNP++QR LG+  + +IG+ LGL   W Y II+ 
Sbjct: 242 WTEIAMLNAEDLGVNSKNVDEMLK-STNPNIQRLLGV--TGDIGKNLGLDPKWAYNIIKQ 298

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGE F+RN+G  S LKI RG NALW  GGL Y  PIR
Sbjct: 299 VGNYGESFERNVGQGSPLKIERGLNALWKNGGLQYGAPIR 338


>gi|326408764|gb|ADZ65829.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           melitensis M28]
 gi|326538482|gb|ADZ86697.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           melitensis M5-90]
          Length = 338

 Score =  358 bits (919), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 185/339 (54%), Positives = 246/339 (72%), Gaps = 3/339 (0%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
              +L    LF  +   +A  L D+K +GFL+CG+NTGL+GFA     G+W GFDVD+CR
Sbjct: 1   MTGVLGAAALFGIASGASADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFDVDYCR 60

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A++SAIF DP+K+++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F  I Y+D
Sbjct: 61  AVASAIFGDPTKVKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYD 120

Query: 126 GQGFIM--HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           GQGF++   K  GI+S  QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P VFE++EE +
Sbjct: 121 GQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPAVFEKIEEAN 180

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           AAY + RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD  W ++V W
Sbjct: 181 AAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRW 240

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303
           TH A++ AEE GITQ N+ ++ K + NPD++R LG +  + IG  LGL KDW  +II+ +
Sbjct: 241 THNALLNAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGV 299

Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GNYGE+F+RN+G+ S LKI RG NA W+KGGL Y  P+R
Sbjct: 300 GNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 338


>gi|306846158|ref|ZP_07478720.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           sp. BO1]
 gi|306273409|gb|EFM55270.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           sp. BO1]
          Length = 339

 Score =  358 bits (919), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 167/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PDV+RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDVRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|158338716|ref|YP_001519893.1| lysine-arginine-ornithine-binding periplasmic protein, putative
           [Acaryochloris marina MBIC11017]
 gi|158308957|gb|ABW30574.1| lysine-arginine-ornithine-binding periplasmic protein, putative
           [Acaryochloris marina MBIC11017]
          Length = 343

 Score =  358 bits (919), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 146/346 (42%), Positives = 217/346 (62%), Gaps = 7/346 (2%)

Query: 1   MYKDF----FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M + F       ++ L +   +S       L  +  +  ++CGI+  L GF+ V   G++
Sbjct: 1   MIRKFSSLCAALLVALTLGSCSSSEAAGGRLQQVLAQKKVRCGISGELPGFSFVDEKGNY 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G DVD CRA+++A+FDDP  ++Y PLNAKERF A+Q+ ++D+LSRNT WTL R+ S+ +
Sbjct: 61  SGLDVDICRAIAAALFDDPDAVEYRPLNAKERFAAVQTGEVDVLSRNTTWTLDRDSSVRM 120

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           AF P+ ++DGQG ++    GI ++      ++C Q GTT E  L D  +   + Y  +V+
Sbjct: 121 AFAPVVFYDGQGVMVKADSGIKTLKDFKNRTVCTQTGTTNEKNLKDQMRKRKVDYKLVVY 180

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E +    AAY   RCD  T D S L + +    +P  H IL +++SK PLAPA+  GD E
Sbjct: 181 EDINSAYAAYAEGRCDGVTSDRSQLISRRTALPKPESHTILDEVLSKEPLAPAVADGDVE 240

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296
           W ++V W   A V AEELGI Q N+   +K + +P V+RFLG ++   +G++LGL+ D+ 
Sbjct: 241 WADVVRWVVNATVEAEELGIQQDNLASFAK-SEDPVVKRFLGTEE--ELGKSLGLSPDFA 297

Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            RI++H+GNYGE++DRNLG  ++L +PRG N LWSKGGLMY+PP R
Sbjct: 298 ARIVKHVGNYGEIYDRNLGPNTKLNLPRGQNQLWSKGGLMYSPPFR 343


>gi|62317227|ref|YP_223080.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella abortus bv. 1 str. 9-941]
 gi|83269208|ref|YP_418499.1| glutamate-binding protein [Brucella melitensis biovar Abortus 2308]
 gi|189022489|ref|YP_001932230.1| Solute-binding protein/glutamate receptor [Brucella abortus S19]
 gi|237816787|ref|ZP_04595779.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           abortus str. 2308 A]
 gi|254698509|ref|ZP_05160337.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 2
           str. 86/8/59]
 gi|254731957|ref|ZP_05190535.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 4
           str. 292]
 gi|260544464|ref|ZP_05820285.1| solute-binding protein/glutamate receptor [Brucella abortus NCTC
           8038]
 gi|260759731|ref|ZP_05872079.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           4 str. 292]
 gi|260762971|ref|ZP_05875303.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           2 str. 86/8/59]
 gi|62197420|gb|AAX75719.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella abortus bv. 1 str. 9-941]
 gi|82939482|emb|CAJ12452.1| Solute-binding protein/glutamate receptor:Bacterial extracellular
           solute-binding protein, family 3 [Brucella melitensis
           biovar Abortus 2308]
 gi|189021063|gb|ACD73784.1| Solute-binding protein/glutamate receptor [Brucella abortus S19]
 gi|237787600|gb|EEP61816.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           abortus str. 2308 A]
 gi|260097735|gb|EEW81609.1| solute-binding protein/glutamate receptor [Brucella abortus NCTC
           8038]
 gi|260670049|gb|EEX56989.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           4 str. 292]
 gi|260673392|gb|EEX60213.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           2 str. 86/8/59]
          Length = 339

 Score =  358 bits (919), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 164/342 (47%), Positives = 225/342 (65%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LS  T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSCQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADY  AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYCGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PD++RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|256029203|ref|ZP_05442817.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           pinnipedialis M292/94/1]
 gi|265986189|ref|ZP_06098746.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis M292/94/1]
 gi|264658386|gb|EEZ28647.1| extracellular solute-binding protein family 3 [Brucella
           pinnipedialis M292/94/1]
          Length = 339

 Score =  358 bits (919), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 226/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALY  +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYVQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PD++RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|294084021|ref|YP_003550778.1| glutamate/glutamine/aspartate/asparagine ABC transporter
           periplasmic substrate-binding protein [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292663593|gb|ADE38694.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Candidatus
           Puniceispirillum marinum IMCC1322]
          Length = 338

 Score =  358 bits (919), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 156/323 (48%), Positives = 209/323 (64%), Gaps = 2/323 (0%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +  AS L D+K RG +KC  +TGL GFA     G+W GFDVDFCRA ++A+  D  KI 
Sbjct: 18  STAQASTLEDVKSRGEVKCVFSTGLAGFAFPDDKGNWTGFDVDFCRATAAAVLGDAQKIG 77

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P   + RF  L + + D+L RNT  T  R++ + L F  + Y+DGQGF+  K  GISS
Sbjct: 78  PVPATTQNRFTVLNAGEADVLWRNTTITFSRDVGVKLTFLGVNYYDGQGFMAKKSLGISS 137

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
             +L GAS+C+Q GTTTEL LADYF+++NM Y  +      E    Y + R D  T D S
Sbjct: 138 ALELDGASVCIQTGTTTELNLADYFRSNNMTYEAVPVADSAEARECYNSGRGDVLTTDAS 197

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
           AL + +   + P +H++LP+IISK PL PA+ QGD EW +IV W  YA +TAEELGITQ 
Sbjct: 198 ALSSQRAAMENPDDHMVLPEIISKEPLGPAVRQGDDEWADIVRWVLYATITAEELGITQA 257

Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319
           N+N +   T NP+++RFLG++   N+G  LGL+ DW   II  +GNYGE+F+RN+G  + 
Sbjct: 258 NVNTIGATTNNPEIKRFLGLEA--NLGPELGLSNDWAKNIIAQVGNYGEIFERNIGVNTP 315

Query: 320 LKIPRGYNALWSKGGLMYAPPIR 342
           L I RG NALW+ GGL Y+PP R
Sbjct: 316 LGIGRGVNALWTDGGLQYSPPFR 338


>gi|254690732|ref|ZP_05153986.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 6
           str. 870]
 gi|254695963|ref|ZP_05157791.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 3
           str. Tulya]
 gi|256255914|ref|ZP_05461450.1| Solute-binding protein/glutamate receptor [Brucella abortus bv. 9
           str. C68]
 gi|260756304|ref|ZP_05868652.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           6 str. 870]
 gi|260882128|ref|ZP_05893742.1| extracellular solute-binding protein [Brucella abortus bv. 9 str.
           C68]
 gi|261216393|ref|ZP_05930674.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           3 str. Tulya]
 gi|297249275|ref|ZP_06932976.1| general L-amino acid transport system substrate-binding protein
           [Brucella abortus bv. 5 str. B3196]
 gi|260676412|gb|EEX63233.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           6 str. 870]
 gi|260871656|gb|EEX78725.1| extracellular solute-binding protein [Brucella abortus bv. 9 str.
           C68]
 gi|260918000|gb|EEX84861.1| extracellular solute-binding protein family 3 [Brucella abortus bv.
           3 str. Tulya]
 gi|297173144|gb|EFH32508.1| general L-amino acid transport system substrate-binding protein
           [Brucella abortus bv. 5 str. B3196]
          Length = 339

 Score =  358 bits (919), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 226/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADY  AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYCGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PD++RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|222148880|ref|YP_002549837.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221735866|gb|ACM36829.1| ABC transporter substrate binding protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 341

 Score =  358 bits (919), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 176/342 (51%), Positives = 242/342 (70%), Gaps = 1/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L      F + + +A  L D+K +GF++CG++ G+ GF+     GDW G D
Sbjct: 1   MKKTLLSVALGAAAFGFGASAASADTLSDVKAKGFVQCGVSQGIPGFSAPNDKGDWSGLD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CR +++A+F D SK ++ P++AK+RF ALQS +ID+L+RNT WT+ R+ SLG  FR 
Sbjct: 61  VDYCRGIAAAVFGDASKAKFTPVSAKDRFPALQSGEIDVLTRNTTWTISRDTSLGFNFRT 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF+  K   + S  +LSGA++CVQ GTTTEL LADYFKA+ +KY+P+VFE+ +
Sbjct: 121 VNYYDGQGFMAKKSLNVKSALELSGAAVCVQTGTTTELNLADYFKANGLKYNPVVFEKED 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +  AAY A RCD YT D S LYA++L    P ++V+LP++ISK PL PA+ QGD +W+++
Sbjct: 181 DATAAYDAGRCDVYTTDQSGLYAIRLKLKNPDDNVVLPEVISKEPLGPAVRQGDDKWFDV 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSW HYAMV AEE G+T KNI+ +  +   PD++R LG +  S +G  LGL +DW Y +I
Sbjct: 241 VSWVHYAMVNAEEAGVTSKNIDDLKAN-GGPDIKRMLGAEAGSKLGTDLGLKEDWAYNVI 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+FDRN+G  S LKI RG NALWSKGGL Y PPIR
Sbjct: 300 KLVGNYGEVFDRNVGVGSPLKIARGVNALWSKGGLQYGPPIR 341


>gi|153008737|ref|YP_001369952.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151560625|gb|ABS14123.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 339

 Score =  358 bits (918), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 163/342 (47%), Positives = 223/342 (65%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S+L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKIVLGSLLAAGFAMSAQSGAQADTLSTVKERGKINCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  GI S  +L GAS+C + GTTTE   AD+F A+++KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGIDSALKLDGASVCTEQGTTTEQNAADFFSANSIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P    +LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAFTVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEELGITQ + +    ++  PDV+RFLG +   + G+ LGL   W Y ++
Sbjct: 241 VRWTLFAMLEAEELGITQASADA-DLNSKKPDVRRFLGSE--GDSGQQLGLEPKWAYNVV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 SKIGNYGEMFERTIGKGSLLKIDRGINALWNKGGLMYAPPVK 339


>gi|39935626|ref|NP_947902.1| ABC transporter periplasmic amino acid binding protein aapJ-1
           [Rhodopseudomonas palustris CGA009]
 gi|39649479|emb|CAE28001.1| ABC transporter, periplasmic amino acid binding protein aapJ-1
           [Rhodopseudomonas palustris CGA009]
          Length = 338

 Score =  358 bits (918), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 169/320 (52%), Positives = 235/320 (73%), Gaps = 3/320 (0%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +A  L  +K RG L CG++ GL GF+     G+W G DVD CRA+++A+FDDPSK++++P
Sbjct: 22  DAQTLKTVKDRGMLSCGVSQGLPGFSAPDDKGNWAGLDVDVCRAIAAAVFDDPSKVKFVP 81

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           L+AK+RF ALQS +ID+LSRNT WTL R+ SLG+ F  ++Y+DGQGF+  K   ++S  +
Sbjct: 82  LSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGVNFAGVSYYDGQGFMAKKSLKVNSALE 141

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L+GASICVQ GTT E  +ADYFK +NMKY  I F   +E   AY + RCD +T D+S LY
Sbjct: 142 LNGASICVQTGTTNEQNVADYFKGNNMKYEVIAFANADEAVKAYESGRCDVFTSDVSQLY 201

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           A +L    P++H +LP++ISK PL P +  GD +W++IV WT +A+V AEELG+TQKN++
Sbjct: 202 AQRLKLATPADHAVLPEVISKEPLGPLVRHGDDQWFDIVKWTLFALVNAEELGVTQKNVD 261

Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322
           +++K +  P+++R  G D   N+GE LGLTKDW  RI++  GNYGE F+RN+G+ S+L+I
Sbjct: 262 EMAK-SDKPELKRVFGTD--GNLGEQLGLTKDWVARIVKATGNYGESFERNVGSGSKLEI 318

Query: 323 PRGYNALWSKGGLMYAPPIR 342
            RG N LW+KGG+MYAPPIR
Sbjct: 319 ARGLNKLWNKGGIMYAPPIR 338


>gi|23500674|ref|NP_700114.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Brucella suis 1330]
 gi|163845062|ref|YP_001622717.1| hypothetical protein BSUIS_B0940 [Brucella suis ATCC 23445]
 gi|23464321|gb|AAN34119.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Brucella suis 1330]
 gi|163675785|gb|ABY39895.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 339

 Score =  358 bits (918), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PD++RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|256111139|ref|ZP_05452175.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           melitensis bv. 3 str. Ether]
 gi|265992652|ref|ZP_06105209.1| extracellular solute-binding protein [Brucella melitensis bv. 3
           str. Ether]
 gi|262763522|gb|EEZ09554.1| extracellular solute-binding protein [Brucella melitensis bv. 3
           str. Ether]
          Length = 339

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 167/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CGI+ G+ GF+     G W GFD
Sbjct: 1   MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGISQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PD++RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|308188311|ref|YP_003932442.1| amino-acid ABC transporter-binding protein yhdW precursor [Pantoea
           vagans C9-1]
 gi|308058821|gb|ADO10993.1| Putative amino-acid ABC transporter-binding protein yhdW precursor
           [Pantoea vagans C9-1]
          Length = 341

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 159/343 (46%), Positives = 227/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    L   +   +A   L  IKK+GF++CGI+ GL GF+   A G + G 
Sbjct: 1   MKKMMLSTLIAAASLVAIAQQAHAGTTLDAIKKKGFVQCGISDGLPGFSYADAGGKFTGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA ++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G  F 
Sbjct: 61  DVDVCRAAAAAVFGDATKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDGGMGFLFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H+K G+ S  +L GA++C+QAGT TEL +AD+FKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCIQAGTDTELNVADFFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P E ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPLVRRGDDDWFT 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W+ YAM+ AEE+GI  KN++Q++   T PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVKWSLYAMLNAEEMGINSKNVDQMTAKPTTPDMAHLLGAE--GDFGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E FDRN+G  S LKI RG NALW++GG+ YAPP+R
Sbjct: 299 IKQVGNYQESFDRNVGKDSALKIARGQNALWNQGGIQYAPPVR 341


>gi|292486754|ref|YP_003529624.1| putative ABC transporter periplasmic protein [Erwinia amylovora
           CFBP1430]
 gi|292900844|ref|YP_003540213.1| ABC transporter substrate-binding protein [Erwinia amylovora ATCC
           49946]
 gi|291200692|emb|CBJ47825.1| ABC transporter, substrate-binding protein [Erwinia amylovora ATCC
           49946]
 gi|291552171|emb|CBA19208.1| putative ABC transport system, periplasmic component [Erwinia
           amylovora CFBP1430]
 gi|312170822|emb|CBX79082.1| putative ABC transport system, periplasmic component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 341

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 161/343 (46%), Positives = 228/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    LF  +   +A   L  IKK+GF++CGI+ GL GF+   ANG + G 
Sbjct: 1   MKKMMLSTLVTAAALFTLANQAHAGTTLDAIKKKGFIQCGISDGLPGFSYADANGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA ++A+  D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G  F 
Sbjct: 61  DVDVCRAAAAAVLGDAGKVKYTPLTAKERFTALQSGEVDILSRNTTWTSARDGGMGFIFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H+K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P + ++LP++ISK PL P + + D +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDDFIVLPEVISKEPLGPVVRRDDDDWFT 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W+ YAM+ AEE+GIT KN++ +S   +NPD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVKWSLYAMLNAEEMGITSKNVDSMSAKPSNPDMAHLLGAE--GDYGKDLKLGNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+FDRN+G  S+LKI RG NALW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYQEVFDRNVGKDSQLKIVRGQNALWNNGGIQYAPPVR 341


>gi|92112255|ref|YP_572183.1| extracellular solute-binding protein [Chromohalobacter salexigens
           DSM 3043]
 gi|91795345|gb|ABE57484.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 342

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 162/341 (47%), Positives = 224/341 (65%), Gaps = 2/341 (0%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
              F V++   ++L   + ++ A+ L D+K+RG L CG+N GL GF+   A+G+W+G DV
Sbjct: 4   KNKFIVAVPAALLLSGFATASQAATLDDVKERGNLNCGVNVGLAGFSAPDADGNWQGLDV 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           + CR ++SAIF DP  + + PL AKERF ALQS +ID+LSRNT WT  R+ SLGL F   
Sbjct: 64  ETCRGIASAIFGDPDNVVFTPLTAKERFTALQSGEIDVLSRNTTWTATRDNSLGLNFTAT 123

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           T++DGQGF++ K   I S+  L+GASIC+Q+GTT EL LADYF + +++   + F+  ++
Sbjct: 124 TFYDGQGFMVSKDLNIESLEGLNGASICIQSGTTHELNLADYFPSRDIEIKTVTFDTPDQ 183

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
               +   RCD  T D S L AL+L    P    IL  +ISK PL P + QGD +W +IV
Sbjct: 184 TAQGFAHGRCDVLTSDTSQLSALRLQLPEPDSVEILETLISKEPLGPVVRQGDDQWLDIV 243

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
            WT +AMV AEE+G+   N++++  +  NP V R LG D   N GE LGL  DW Y II+
Sbjct: 244 QWTIFAMVNAEEMGVNSDNVDEMRDNPPNPGVARLLGKD--GNYGEQLGLPNDWAYNIIK 301

Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++GNYGE+F   +G  S LKI RG NALW++GG++YAPPIR
Sbjct: 302 NVGNYGEVFATTVGEDSPLKIQRGMNALWNEGGILYAPPIR 342


>gi|239832600|ref|ZP_04680929.1| amino-acid ABC transporter-binding protein yhdW precursor
           [Ochrobactrum intermedium LMG 3301]
 gi|239824867|gb|EEQ96435.1| amino-acid ABC transporter-binding protein yhdW precursor
           [Ochrobactrum intermedium LMG 3301]
          Length = 339

 Score =  357 bits (916), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 161/342 (47%), Positives = 221/342 (64%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      S+L             A  L  +K+RG L CG++ G+ GF+     G W GFD
Sbjct: 1   MKNILLGSLLAAGFALSAQGGAQADTLSTVKERGKLNCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGILFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GAS+C + GTTTE   ADYF A+N+KY P+V +  +
Sbjct: 121 TAYYDGQGFLIRKDLGVDSALKLDGASVCTEQGTTTEQNAADYFSANNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P    +LP++ISK PL PA+ QGD +W+N+
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAFTVLPEVISKEPLGPAVRQGDDKWFNV 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELG+TQ +  +   ++  PDV+RFLG +     G+ LGL   W Y ++
Sbjct: 241 VRWTLFALLEAEELGVTQASA-EADLNSKKPDVRRFLGSEGDG--GQQLGLEPKWAYNVV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 STIGNYGEMFERTIGKGSLLKIDRGLNALWNKGGLMYAPPVK 339


>gi|254700150|ref|ZP_05161978.1| hypothetical protein Bsuib55_04721 [Brucella suis bv. 5 str. 513]
 gi|261750642|ref|ZP_05994351.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5
           str. 513]
 gi|261740395|gb|EEY28321.1| extracellular solute-binding protein family 3 [Brucella suis bv. 5
           str. 513]
          Length = 339

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGAVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PD++RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|154248466|ref|YP_001419424.1| extracellular solute-binding protein [Xanthobacter autotrophicus
           Py2]
 gi|154162551|gb|ABS69767.1| extracellular solute-binding protein family 3 [Xanthobacter
           autotrophicus Py2]
          Length = 336

 Score =  357 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 158/343 (46%), Positives = 231/343 (67%), Gaps = 8/343 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  F      + L   + + NA+ L ++K RG + CG++ GL GF+      +W G D
Sbjct: 1   MKRILF----AAVGLLSLAGAVNAATLDEVKARGSVNCGVSQGLPGFSSPNDKNEWGGLD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFCRA+++AIF+DP+K+++ PL+AK+RF AL S  ID+LSRNT WT+ R+ +LG  F  
Sbjct: 57  VDFCRAIAAAIFNDPAKVKFSPLSAKDRFTALTSGAIDVLSRNTTWTMSRDTTLGFNFAG 116

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFERV 179
           + Y+DGQGF++ K  G+ S  +L GASICVQ GT+ EL ++D+F+++NMK    I F  +
Sbjct: 117 VIYYDGQGFLVRKALGLKSAKELQGASICVQTGTSNELNVSDFFRSNNMKNGEVIAFGTI 176

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   AY + RCD +T D S L A++L     ++HVILP+ ISK PL P +  GD +W++
Sbjct: 177 DETVKAYESGRCDVFTADRSQLAAVRLKLTNAADHVILPETISKEPLGPLVRHGDDQWFD 236

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           +V W ++A++ AEELG+TQKN+++   ++ NPDV+R LG D     GE +GLT DW  RI
Sbjct: 237 LVKWVYFALLNAEELGVTQKNVDEQV-NSQNPDVKRLLGTD--GKYGEGIGLTADWAVRI 293

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+  GNYGE++DRN+G  + L I RG N LW+KGG+ Y  P+R
Sbjct: 294 IKATGNYGEIYDRNVGPATPLGIERGLNNLWNKGGIQYGMPVR 336


>gi|161621000|ref|YP_001594886.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           canis ATCC 23365]
 gi|260567799|ref|ZP_05838268.1| solute-binding protein/glutamate receptor [Brucella suis bv. 4 str.
           40]
 gi|161337811|gb|ABX64115.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           canis ATCC 23365]
 gi|260154464|gb|EEW89545.1| solute-binding protein/glutamate receptor [Brucella suis bv. 4 str.
           40]
          Length = 339

 Score =  357 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDRGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PD++RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|312115908|ref|YP_004013504.1| extracellular solute-binding protein family 3 [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311221037|gb|ADP72405.1| extracellular solute-binding protein family 3 [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 338

 Score =  357 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 164/342 (47%), Positives = 235/342 (68%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +  + ++ C + L        A  L D+K RG L CG+  GL GF+   A+G+W G D
Sbjct: 1   MKR--YGTLYCALALMLFCAGARAGTLDDVKARGKLNCGVTQGLAGFSSADASGNWAGLD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFCRA+++AIFDDPSK+ ++PL++K+RF ALQS +ID+LSR + WT+  + +LG++F  
Sbjct: 59  VDFCRAVAAAIFDDPSKVNFVPLSSKQRFTALQSGEIDVLSRVSTWTMQNDTALGISFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y DGQG ++ KK  + S  +LSGA +C   GTTTEL +AD+F++ +M Y  + FE+ +
Sbjct: 119 VIYHDGQGLMVRKKLEVQSALELSGAEVCTNTGTTTELNIADFFRSRSMPYRIVAFEKSD 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY A RCD Y+ D S+L A ++   +P EHVILPD+ISK PLAPA+ Q D +W ++
Sbjct: 179 EALKAYEAERCDVYSTDASSLSAQRVKLAQPDEHVILPDLISKEPLAPAVRQNDPQWESL 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEEL +T+ N +++S+    P V+R LG +   + G ALGL KDW  + I
Sbjct: 239 VRWTLFALINAEELAVTKANADKLSRTDAAPGVRRLLGAES--DYGRALGLDKDWALKAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           R +GNYGE+FDRNLG QS LKI RG N LW+ GG+++APP+R
Sbjct: 297 RAVGNYGEIFDRNLGQQSPLKIERGLNKLWNNGGILFAPPVR 338


>gi|315122673|ref|YP_004063162.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Candidatus Liberibacter solanacearum CLso-ZC1]
 gi|313496075|gb|ADR52674.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Candidatus Liberibacter solanacearum CLso-ZC1]
          Length = 342

 Score =  357 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 274/342 (80%), Positives = 310/342 (90%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           MY++FF+SILCLI L FT+F T ASIL +IKKRGFLKCGINTGL GF+E++ANGDWKGFD
Sbjct: 1   MYRNFFISILCLIGLTFTNFPTYASILQNIKKRGFLKCGINTGLTGFSEIQANGDWKGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFC+ALS+AIFDD SK+QYLPLNAKERF++LQSKQIDILSRNTDWTLLRE  LGLAFRP
Sbjct: 61  VDFCKALSAAIFDDSSKVQYLPLNAKERFISLQSKQIDILSRNTDWTLLRETKLGLAFRP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           ITYFDGQG +M+KK G+SS  QLS ASICVQAGTTTE TLADYFKAHNMKYHPIVFERVE
Sbjct: 121 ITYFDGQGLMMYKKSGVSSALQLSDASICVQAGTTTEKTLADYFKAHNMKYHPIVFERVE 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           EIDAAYR+HRCD YTGD SALYAL+L+ D P+EHVIL DIISKSPL PAI+QGD+EW NI
Sbjct: 181 EIDAAYRSHRCDVYTGDKSALYALRLSTDNPNEHVILKDIISKSPLGPAILQGDSEWSNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           VSWTHYA+V AEELGITQ N++Q    T +PD++RFLGIDKS+NIGE+LGL+KDW Y+II
Sbjct: 241 VSWTHYALVNAEELGITQSNVDQKRLTTNDPDMKRFLGIDKSANIGESLGLSKDWAYQII 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +HMGNYGE+FDRNLG+QS LKIPR YNALWSKGG+MYAPPIR
Sbjct: 301 KHMGNYGEIFDRNLGSQSALKIPREYNALWSKGGIMYAPPIR 342


>gi|156741438|ref|YP_001431567.1| extracellular solute-binding protein [Roseiflexus castenholzii DSM
           13941]
 gi|156232766|gb|ABU57549.1| extracellular solute-binding protein family 3 [Roseiflexus
           castenholzii DSM 13941]
          Length = 389

 Score =  357 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 153/319 (47%), Positives = 210/319 (65%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
              L  I+ RG L CG+N+ + GF  V   G + GFD+D+C+AL++AIF+D SKI+Y PL
Sbjct: 71  GETLKAIQARGKLICGVNSQVPGFGFVDPTGAFSGFDIDYCKALAAAIFNDVSKIEYRPL 130

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
            A++RF ALQS +ID+L RNT WTL R+   G  F   T++DGQG ++ K   I+ +  L
Sbjct: 131 TAEQRFAALQSGEIDVLIRNTTWTLTRDTDNGGNFVATTFYDGQGIMVPKASNITKLEDL 190

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           +GA+ICVQ GTTTEL LAD   A N+ Y P  FE      AAY   RCDA T D S L +
Sbjct: 191 NGATICVQKGTTTELNLADQMNARNLAYTPATFEDANSTFAAYAEERCDAVTTDKSGLVS 250

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
            +     P +HVIL   +SK PL P + QGD +W++IV W  +A   AEE GIT +N++Q
Sbjct: 251 RRSVLPNPDDHVILDVTLSKEPLGPMVRQGDDQWFDIVQWAVFATFAAEEFGITSQNVDQ 310

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323
           + +  T P+V+R LG D + ++G  LGL+KDW   +I+ +GNYGE++DRNLG  ++  IP
Sbjct: 311 LKETDTRPEVRRLLGADPNVDLGAKLGLSKDWAANVIKAVGNYGEIYDRNLGPNTKTAIP 370

Query: 324 RGYNALWSKGGLMYAPPIR 342
           RG N L+++GGL+YAPP R
Sbjct: 371 RGINNLYTQGGLLYAPPFR 389


>gi|86750029|ref|YP_486525.1| extracellular solute-binding protein [Rhodopseudomonas palustris
           HaA2]
 gi|86573057|gb|ABD07614.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas
           palustris HaA2]
          Length = 337

 Score =  356 bits (914), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 167/322 (51%), Positives = 231/322 (71%), Gaps = 3/322 (0%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           S  A  L  +K RG L CG++ GL GF+     G+W G DVD CR +++AIFDDPSK+++
Sbjct: 19  SAGAQTLKTVKDRGILSCGVSQGLPGFSAPDDKGNWTGLDVDVCRGIAAAIFDDPSKVKF 78

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +PL+AK+RF ALQS +ID+LSRNT WTL R+ SLG+ F  ++Y+DGQGF++ K   ++S 
Sbjct: 79  VPLSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGVNFAGVSYYDGQGFLVKKALKVNSA 138

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
            +L+ AS+CVQ GTT E  +ADYFK +NMKY  I F   +E   AY + RCD +T D+S 
Sbjct: 139 LELNSASVCVQTGTTNEQNVADYFKGNNMKYEVIAFANADEAIKAYESGRCDVFTSDVSQ 198

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
           LYA +L    P++HV+LP++ISK PL P +  GD +W+++V WT +AM+ AEELG+TQ N
Sbjct: 199 LYAQRLKLATPADHVVLPEVISKEPLGPLVRHGDDQWFDVVKWTLFAMINAEELGVTQSN 258

Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320
           + +++K +  P+++R  G D   N+GE LGLTKDW  RII+  GNYGE F+RN+G  S+L
Sbjct: 259 VAEMAK-SDKPELRRVFGTD--GNLGEQLGLTKDWVARIIKATGNYGESFERNVGAGSKL 315

Query: 321 KIPRGYNALWSKGGLMYAPPIR 342
           +I RG N  W+KGG+MYAPPIR
Sbjct: 316 EIARGLNKPWNKGGIMYAPPIR 337


>gi|254720190|ref|ZP_05182001.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           sp. 83/13]
 gi|265985199|ref|ZP_06097934.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13]
 gi|306838669|ref|ZP_07471505.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           sp. NF 2653]
 gi|264663791|gb|EEZ34052.1| extracellular solute-binding protein family 3 [Brucella sp. 83/13]
 gi|306406312|gb|EFM62555.1| amino-acid ABC transporter-binding protein yhdW precursor [Brucella
           sp. NF 2653]
          Length = 339

 Score =  356 bits (914), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 168/342 (49%), Positives = 227/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKTVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  LG+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGLGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPEAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PDV+RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDVRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ALVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|146278537|ref|YP_001168696.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rhodobacter sphaeroides ATCC 17025]
 gi|145556778|gb|ABP71391.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rhodobacter sphaeroides ATCC 17025]
          Length = 338

 Score =  356 bits (914), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 150/342 (43%), Positives = 218/342 (63%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+  L +  L     S     L D+K RG L CG++TGL GF+   ANG+W GFD
Sbjct: 1   MKKSVFLGTLTVAGLAAGLGSAA--TLDDVKARGELNCGVSTGLTGFSLPDANGNWTGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D +K++++P   + RF AL S ++D+L+RN+ WT  R+  L L F  
Sbjct: 59  VALCRAVAAAVLGDGTKVKFVPTTGQTRFTALASGEVDMLARNSTWTFSRDTDLKLDFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G++S  +L GA++C+Q GTTTEL LAD+FK +N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVRKDLGVTSAKELDGATVCIQTGTTTELNLADWFKVNNLSYTPVAVETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E +  Y A  CDAYT D S L A +     P  HVILP+IISK PL PA+  GD EW ++
Sbjct: 179 EGEQQYAAGACDAYTTDASGLAATRAAFADPENHVILPEIISKEPLGPAVRHGDNEWADV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A++ AEE G+T  N+ +++ ++ NP+++R LG++   ++G  + L KDW  R I
Sbjct: 239 VGWTLNALIAAEEYGVTSTNMEELAANSPNPEIRRLLGVE--GDLGPMIRLDKDWAKRAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F   +G  + + + RG NA W++GGL+YAPP R
Sbjct: 297 SVGGNYGEIFAATIGEATPIGLARGLNAQWTQGGLLYAPPFR 338


>gi|283788089|ref|YP_003367954.1| Putative ABC transporter, substrate-binding protein [Citrobacter
           rodentium ICC168]
 gi|282951543|emb|CBG91242.1| Putative ABC transporter, substrate-binding protein [Citrobacter
           rodentium ICC168]
          Length = 337

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 156/339 (46%), Positives = 228/339 (67%), Gaps = 3/339 (0%)

Query: 5   FFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
              ++    +L      T+A   L  +KK+GF++CGI+ GL GF+   A+G + G DVD 
Sbjct: 1   MIATLAAAGVLIAVVNQTHAGATLDAVKKKGFVQCGISDGLPGFSYADADGKFSGIDVDV 60

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
           CR +++A+  D SK++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G++F  +TY
Sbjct: 61  CRGVAAAVLGDDSKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMSFTGVTY 120

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           +DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E  
Sbjct: 121 YDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESA 180

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A  + RCD    D S LYAL++    P E ++LP++ISK PL P + +GD EW+ IV W
Sbjct: 181 KALESGRCDTLASDQSQLYALRIKLSNPGEWIVLPEVISKEPLGPVVRRGDDEWFAIVRW 240

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303
           T +AM+ AEE+G+T KN+++ + +   PD+   LG +   + G+ L L   W Y +I+ +
Sbjct: 241 TLFAMLNAEEMGVTSKNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNTWAYNVIKQV 298

Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 GNYAEIFERNVGSESPLKIERGQNNLWNNGGIQYAPPVR 337


>gi|271498820|ref|YP_003331845.1| family 3 extracellular solute-binding protein [Dickeya dadantii
           Ech586]
 gi|270342375|gb|ACZ75140.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech586]
          Length = 343

 Score =  356 bits (913), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 166/343 (48%), Positives = 235/343 (68%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    LF      +A   L  I+K+GF++CGI+ GL GF+   ANG + G 
Sbjct: 3   MKKVIMSTLVASASLFAFINQAHAGATLDAIQKKGFVQCGISDGLPGFSYADANGKYSGI 62

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++AIF D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+ S+GL F 
Sbjct: 63  DVDVCRGVAAAIFGDANKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDGSMGLLFT 122

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFK HNMKY P+ F+R 
Sbjct: 123 GVTYYDGIGFLAHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKTHNMKYTPVTFDRS 182

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P++ V+LP++ISK PL P + +GD +W+ 
Sbjct: 183 DESAKALDSGRCDTLASDQSQLYALRIKLGKPADFVVLPEVISKEPLGPVVRRGDEDWFA 242

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+T +N++Q++   T PD+   LG +   N G+ L L  DW Y+I
Sbjct: 243 IVRWTLFAMLDAEEMGVTSQNVDQMAAKPTTPDMAHLLGKE--GNFGKDLKLPNDWAYKI 300

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE+F+RN+G  SELKI RG N LW+KGG+ YAP +R
Sbjct: 301 VKQVGNYGEVFERNVGQGSELKIKRGLNELWNKGGIQYAPAVR 343


>gi|307129011|ref|YP_003881027.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Dickeya dadantii 3937]
 gi|306526540|gb|ADM96470.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Dickeya dadantii 3937]
          Length = 341

 Score =  356 bits (913), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 167/343 (48%), Positives = 234/343 (68%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    LF      +A   L  I+K+GF++CGI+ GL GF+   ANG + G 
Sbjct: 1   MKKVIMSTLVASASLFAFINQAHAGATLDAIQKKGFVQCGISDGLPGFSYADANGKYSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++AIF D +K+++ PL AKERF ALQS ++D+LSRNT WT  R+  +GL F 
Sbjct: 61  DVDVCRGVAAAIFGDANKVKFTPLTAKERFTALQSGEVDLLSRNTTWTSSRDGGMGLLFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFK HNMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKTHNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P++ V+LP++ISK PL P + +GD +WY 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPADFVVLPEVISKEPLGPVVRRGDEDWYA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GIT +N++Q++   T PD+   LG +   N G+ L L  DW Y+I
Sbjct: 241 IVRWTLFAMLNAEEMGITSQNVDQMAAKPTTPDMSHLLGKE--GNYGKDLKLPADWAYKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE+F+RN+G  SELKI RG N LW+KGG+ YAP IR
Sbjct: 299 VKQVGNYGEVFERNVGQGSELKIKRGLNELWNKGGIQYAPAIR 341


>gi|83950493|ref|ZP_00959226.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseovarius
           nubinhibens ISM]
 gi|83838392|gb|EAP77688.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseovarius
           nubinhibens ISM]
          Length = 339

 Score =  356 bits (913), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 155/343 (45%), Positives = 220/343 (64%), Gaps = 5/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L +    + +  A  L D+K RG L CG+ TGLVGFA    NG W GFD
Sbjct: 1   MKKSVFLG--ALTVAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPDENGRWDGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  DP  ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VGVCRAVAAAVLGDPDAVEFVPTTGKTRFTALASGEIDVLARNTTWTFSRDVDLKFTFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y++GQGF++ K+ G+SS  +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+  E   
Sbjct: 119 VNYYNGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + + + P++HV+LP+IISK PL P +  GD EW ++
Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRASFENPADHVVLPEIISKEPLGPLVRHGDDEWGDV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQV-SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           V WT  A++ AEELGIT  NI ++ +    NP+V R LG +   N+GE LGL  DW  + 
Sbjct: 239 VRWTLNALIAAEELGITSANIGELSAAAGDNPEVNRLLGTE--GNLGEMLGLDADWAVKA 296

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++  GNYGE+F++N+G  S + + RG NA W+ GGL+Y+PP R
Sbjct: 297 VQAGGNYGELFEKNIGENSPVGLARGLNAQWTDGGLLYSPPFR 339


>gi|126736638|ref|ZP_01752378.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseobacter sp.
           CCS2]
 gi|126713951|gb|EBA10822.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseobacter sp.
           CCS2]
          Length = 339

 Score =  356 bits (913), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 152/343 (44%), Positives = 217/343 (63%), Gaps = 5/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F     L +  F +   +A+ L D+K+RG L CG+ TGLVGFA   ANG W GFD
Sbjct: 1   MKKTAFYG--ALTVAGFAASMASAATLDDVKERGVLNCGVTTGLVGFASPDANGVWDGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D   ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VGVCRAVAAAVLGDSDAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y+DGQGF++ +  G+SS  +L GA++C+Q GTTTEL LADYF+++N+ Y P+  E   
Sbjct: 119 INYYDGQGFLVPRDLGVSSAKELDGATVCIQTGTTTELNLADYFRSNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A +   + P++HV+LP+I+SK PL P +  GD +W ++
Sbjct: 179 EGQQQYLAGACDVYTTDASGLAATRAAFENPADHVVLPEIVSKEPLGPLVRHGDNDWADV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTT-NPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           V W+  A++ AEELG+T  NI +++   T NP+V R LG +    +G  LGL  DW    
Sbjct: 239 VRWSLNALIAAEELGVTSANIEELAAAPTGNPEVNRLLGTE--GELGAMLGLEADWAKNA 296

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I   GNYGE+F++N+G  + + + RG NA W+ GGL+Y+PP R
Sbjct: 297 IAAGGNYGELFEKNIGENTPIGLARGLNAQWTDGGLLYSPPFR 339


>gi|313902268|ref|ZP_07835673.1| extracellular solute-binding protein family 3 [Thermaerobacter
           subterraneus DSM 13965]
 gi|313467419|gb|EFR62928.1| extracellular solute-binding protein family 3 [Thermaerobacter
           subterraneus DSM 13965]
          Length = 385

 Score =  355 bits (912), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 138/322 (42%), Positives = 212/322 (65%), Gaps = 3/322 (0%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
               S L  +  RG L CG+N  L GF+ +  +G   GFD DFCRA+++A+FDDP+ +++
Sbjct: 67  QAGQSRLQVVLSRGKLICGVNGQLPGFSYLDPSGQMTGFDADFCRAIAAALFDDPNAVEF 126

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
            PL+A+ERF A+QS ++D+L RNT WTL R+   G+ F P T++DG G ++ K + + S+
Sbjct: 127 RPLSAQERFTAVQSGEVDVLIRNTTWTLGRDTVNGMEFLPTTFYDGGGVMVRKDRNVKSL 186

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           + L GA+ICV +GTT E+ L D  +A    + P  FE  +++ A Y +  CDA T D S 
Sbjct: 187 ADLDGATICVLSGTTNEMVLTDRMRALGASFTPKTFEDADQLYATYESGGCDAVTSDKSQ 246

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
           L   +     P  HVIL +++SK PL PA+   D+ W+++V W  +A + AEE GI  +N
Sbjct: 247 LAGRRAVLSDPDNHVILDEMLSKEPLGPAVKNNDSTWFDVVKWIVFATIQAEEFGINSQN 306

Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320
           ++Q  K++ NPD++RFLG++    +G+ LG++ D+ YR+I+H+GNYGE+++RNLG  +  
Sbjct: 307 VDQF-KNSDNPDIRRFLGVE--GELGKGLGISNDFAYRVIKHVGNYGEIYERNLGPDTPF 363

Query: 321 KIPRGYNALWSKGGLMYAPPIR 342
           K+ RG N LW+ GGL+Y+PP R
Sbjct: 364 KLERGLNELWTNGGLLYSPPFR 385


>gi|77457200|ref|YP_346705.1| extracellular solute-binding protein [Pseudomonas fluorescens
           Pf0-1]
 gi|77381203|gb|ABA72716.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 343

 Score =  355 bits (912), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 151/343 (44%), Positives = 217/343 (63%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +    +L  + F+   + L  +KK+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAIVTAAAVLGVSGFAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDSTGKIVGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT  T  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTMTSSRDAGMGLKFPG 122

Query: 121 ITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +    GF+++ K G+ S  +L GA+IC+QAGTTTEL ++DYF+ + +KY PI F+  
Sbjct: 123 FITYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNGLKYTPITFDTS 182

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   +  + RCD  T D S L+A +     P ++V+LP+ ISK PL P +  GD EW  
Sbjct: 183 DESAKSLESGRCDVLTSDKSQLFAQRSKLASPKDYVVLPETISKEPLGPVVRNGDDEWLA 242

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W  YA++  EE GI+ KN+   +K T NPDV R LG D     G+ L L KDW  +I
Sbjct: 243 IVRWVGYALLNTEEAGISSKNVEAEAKSTKNPDVARMLGAD--GEYGKDLKLPKDWVVQI 300

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE+F++NLG  + L+I RG NALW+ GG+ YAPP+R
Sbjct: 301 VKQVGNYGEIFEKNLGKSTPLEIDRGLNALWNNGGIQYAPPVR 343


>gi|300865204|ref|ZP_07110022.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506]
 gi|300336795|emb|CBN55172.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506]
          Length = 354

 Score =  355 bits (912), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 149/330 (45%), Positives = 213/330 (64%), Gaps = 2/330 (0%)

Query: 13  IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIF 72
           +    ++     S L  I  RG L CG++  L GF+ V   G + G DV+ CRA+++A+F
Sbjct: 27  VATTSSATPQVQSRLDKIISRGTLICGVSGQLPGFSFVDEKGKYSGLDVEICRAIAAALF 86

Query: 73  DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
           DDP K++Y  LNAKERF ALQS +IDILSRNT WTL R+ S GL F P+ ++D Q  ++ 
Sbjct: 87  DDPEKVEYRNLNAKERFTALQSGEIDILSRNTTWTLSRDGSTGLEFAPVVFYDSQSIMVK 146

Query: 133 KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192
           K  GI ++   +G SICVQ GT+TE  L+D  +   +KY P+VFE V    A Y+  RC 
Sbjct: 147 KDSGIQTLKDFAGKSICVQTGTSTEQNLSDQMRKLGIKYTPVVFEDVNATFATYQEGRCQ 206

Query: 193 AYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAE 252
             T D S L + +     P +H+IL +++SK PLAPA+  GD++W + V W  YA + AE
Sbjct: 207 GVTADRSQLVSKRTILPTPDQHIILNEVMSKEPLAPAVSSGDSKWADAVRWIVYATIEAE 266

Query: 253 ELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDR 312
           +LG+  +NI+Q++  TT+P+V+R +G +   ++G+ LGL  D+  R I+ +GNYGE++DR
Sbjct: 267 DLGVNSQNIDQLATTTTDPNVKRLIGTE--GDLGKGLGLPNDFALRTIKKVGNYGEIYDR 324

Query: 313 NLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           NLG  S LK+ RG N LW  GGL+Y+PP R
Sbjct: 325 NLGPSSTLKLDRGQNRLWKDGGLLYSPPFR 354


>gi|317122275|ref|YP_004102278.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Thermaerobacter marianensis DSM 12885]
 gi|315592255|gb|ADU51551.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Thermaerobacter marianensis DSM 12885]
          Length = 366

 Score =  355 bits (912), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 142/318 (44%), Positives = 214/318 (67%), Gaps = 3/318 (0%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  + +RG L CG+N  L GF+ +  NG   GFD DFCRA+++A+FDDP+ +++ PL+
Sbjct: 52  SRLQVVLQRGKLICGVNGQLPGFSYLDPNGQMTGFDADFCRAIAAALFDDPNAVEFRPLS 111

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           A+ERF A+QS ++D+L RNT WTL R+   G+ F P T++DG G ++ K + + +++ L 
Sbjct: 112 AQERFTAVQSGEVDVLIRNTTWTLGRDTVNGMEFAPTTFYDGGGIMVRKDRNVKTLADLD 171

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           GA+ICV +GTT E+ L D  +A    + P  FE  +++ A Y +  CDA T D S L   
Sbjct: 172 GATICVLSGTTNEMVLTDRMRALGASFTPKTFEDADQLYATYESGGCDAVTSDKSQLAGR 231

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +     P  HVIL +++SK PL PA+   D+ W+++V W  YA + AEE GIT +N++Q 
Sbjct: 232 RAVLSDPDNHVILDEMLSKEPLGPAVKNNDSAWFDVVKWVVYATIQAEEFGITSQNVDQF 291

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
            K++ NPD++RFLG++    +G+ LG++ D+ YR+I+H+GNYGE++DRNLG  +  K+ R
Sbjct: 292 -KNSDNPDIRRFLGVE--GELGQGLGISNDFAYRVIKHVGNYGEIYDRNLGPNTPFKLER 348

Query: 325 GYNALWSKGGLMYAPPIR 342
           G N LW+ GGL+YAPP R
Sbjct: 349 GLNELWTNGGLLYAPPFR 366


>gi|330446205|ref|ZP_08309857.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328490396|dbj|GAA04354.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 342

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 161/341 (47%), Positives = 233/341 (68%), Gaps = 2/341 (0%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
                 + L      F +     + L  + K+G+++CG++ GL GF+   A G W+G DV
Sbjct: 4   KLSVVFAALASSTALFAANVNAEATLDKVMKQGYVQCGVSAGLPGFSNPNAKGQWEGLDV 63

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           +FC+A+++A   D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  +
Sbjct: 64  EFCQAIAAATIGDKSKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFTGV 123

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y+DGQGF++ K  GI S  +L GA++CVQ+GTTTEL LADYF+ + M+Y P+VF+   +
Sbjct: 124 NYYDGQGFMVKKDMGIKSAKELDGAAVCVQSGTTTELNLADYFRVNGMEYKPVVFDTAPQ 183

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
               + + RCD  T D S LYAL+L    P+  V+LP+IISK PL P + QGD +W+NIV
Sbjct: 184 TSKGFDSGRCDVLTTDQSGLYALRLNLKDPNSAVVLPEIISKEPLGPVVRQGDDQWFNIV 243

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
            WT + M+ AEE G+T  N+++++K++ +P+++R +G+D     G+ LGL  DW Y+II+
Sbjct: 244 RWTLFTMINAEEFGVTAANVDKLAKESKDPNIRRLIGLD--GPKGKGLGLKDDWGYQIIK 301

Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            +GNYGE F+R +G  S LKI RG NALW++GG+ YAPPIR
Sbjct: 302 QVGNYGESFERTVGEGSPLKIKRGLNALWTQGGIQYAPPIR 342


>gi|156935788|ref|YP_001439704.1| hypothetical protein ESA_03659 [Cronobacter sakazakii ATCC BAA-894]
 gi|156534042|gb|ABU78868.1| hypothetical protein ESA_03659 [Cronobacter sakazakii ATCC BAA-894]
          Length = 341

 Score =  355 bits (911), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 162/343 (47%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++     LF  +   +A   L  +KK+GF++CGI+ GL GF+   A G + G 
Sbjct: 1   MKKMMIATLAAAGALFAVANQAHAGATLDSVKKKGFVQCGISDGLPGFSYADAGGKFTGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D SK++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G++F 
Sbjct: 61  DVDVCRGVAAAVFGDASKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDAGMGMSFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  KN++  + + + PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGIDSKNVDAKAANPSTPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNYGE+F+RN+G +S LKI RG N LW+KGG+ YAPP+R
Sbjct: 299 IKQVGNYGEIFERNVGQESPLKIKRGQNNLWNKGGIQYAPPVR 341


>gi|148658095|ref|YP_001278300.1| extracellular solute-binding protein [Roseiflexus sp. RS-1]
 gi|148570205|gb|ABQ92350.1| extracellular solute-binding protein, family 3 [Roseiflexus sp.
           RS-1]
          Length = 389

 Score =  354 bits (909), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 152/319 (47%), Positives = 210/319 (65%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
              L  I+ RG L CG+N+ + GF  V   G + GFD+D+C+AL++AIF+D SK++Y PL
Sbjct: 71  GETLKAIQARGKLICGVNSQVPGFGFVDPTGAFSGFDIDYCKALAAAIFNDVSKVEYRPL 130

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
            A++RF ALQS +ID+L RNT WTL R+   G  F   T++DGQG ++ K   I+ +  L
Sbjct: 131 TAEQRFAALQSGEIDVLIRNTTWTLTRDTDNGGNFVATTFYDGQGIMVPKASNITKLEDL 190

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           +GA+ICVQ GTTTEL LAD   A  ++Y P VFE      AAY   RCDA T D S L +
Sbjct: 191 NGATICVQKGTTTELNLADQMAARKLQYTPAVFEDANSTFAAYAEERCDAVTTDKSGLVS 250

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
            +     P +HVIL   +SK PL P + QGD +W++IV WT +A   AEE GIT +N++Q
Sbjct: 251 RRSVLPNPDDHVILDVTLSKEPLGPMVRQGDDQWFDIVQWTVFATFAAEEFGITSRNVDQ 310

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323
             +  T P+V+R LG D + ++G  LGL+KDW   +I+ +GNY E++DRNLG  ++  IP
Sbjct: 311 AKESDTRPEVRRLLGADPNVDLGAKLGLSKDWAANVIKSVGNYAEIYDRNLGPNTKTAIP 370

Query: 324 RGYNALWSKGGLMYAPPIR 342
           RG N L+++GGL+YAPP R
Sbjct: 371 RGINNLYTQGGLLYAPPFR 389


>gi|114706424|ref|ZP_01439326.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Fulvimarina pelagi HTCC2506]
 gi|114538285|gb|EAU41407.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Fulvimarina pelagi HTCC2506]
          Length = 339

 Score =  354 bits (909), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 167/342 (48%), Positives = 237/342 (69%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   F  + L L +    +    A   G +K+RG L+CG+NTGL GFA     G+W+G D
Sbjct: 1   MTIKFLTAALGLSVAALATAGAQAQTAGTVKERGSLRCGVNTGLPGFASQNDQGEWQGLD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRA+++A+  DP  + + PL+A +RF ALQ+ +ID+L+RNT WT+ R+ +LGL F  
Sbjct: 61  VDYCRAVATAVLGDPQAVTFSPLSAVQRFPALQNNEIDLLARNTTWTMDRDTALGLDFAG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++    G++S  +LSGA++CVQ+GTTTEL LADYF+A++M Y+P+V E   
Sbjct: 121 VNYYDGQGFMVKNDLGVNSALELSGATVCVQSGTTTELNLADYFEANDMDYNPVVIESQS 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++++AY + RCD  T D S L A +L    P  H ILP+IISK PL PA+ QGD +W +I
Sbjct: 181 DVNSAYDSGRCDVLTTDASGLAASRLEMSNPDNHTILPEIISKEPLGPAVRQGDDQWADI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WTHYA++ AEELG+ Q N+ ++ K++ NPD++R LG D   N GE LGL +DW  ++I
Sbjct: 241 VRWTHYALLNAEELGVNQGNVEEM-KNSDNPDIRRLLGQDS--NFGEPLGLPQDWAAQVI 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGE+F+RN+G  + LKI RG NALW+ GGL Y  P+R
Sbjct: 298 SAVGNYGEIFERNIGVNTPLKIQRGQNALWTDGGLQYGMPVR 339


>gi|90409066|ref|ZP_01217191.1| general L-amino acid-binding protein [Psychromonas sp. CNPT3]
 gi|90309823|gb|EAS37983.1| general L-amino acid-binding protein [Psychromonas sp. CNPT3]
          Length = 337

 Score =  354 bits (909), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 160/342 (46%), Positives = 224/342 (65%), Gaps = 5/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        L   +        +A  L  + K G L CG++TG+ GF+   + G WKG D
Sbjct: 1   MK--VIKIALLFSVASLVPQLASADTLAKVLKNGTLHCGVSTGIPGFSATDSKGVWKGID 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFCR+++SA+  D SK++Y+PL AKERF ALQS +ID+L R++ WT  R+ SLGL F  
Sbjct: 59  VDFCRSVASAVLGDASKVKYIPLTAKERFTALQSGEIDVLVRSSTWTATRDTSLGLNFAG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K   ++S   L GA+ C+QAGTTTEL L DYFK++NM+Y  + ++   
Sbjct: 119 VNYYDGQGFLVKKSLNVNSAKDLDGATFCIQAGTTTELNLTDYFKSNNMQYKAVTYDTSG 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    ++  RCDA T D S LY LKL    P   ++LP+IISK PL P + QGD +W+N+
Sbjct: 179 QTIDGFKKGRCDAVTSDASQLYGLKLKMKDPQSVMVLPEIISKEPLGPVVRQGDDKWFNV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A ++AEELG+T  N++ + K + NP V+R LGI  S   G  LGL++ W Y II
Sbjct: 239 VRWTLFASISAEELGVTTANVDTMLK-SKNPSVKRLLGI--SGKTGADLGLSEKWAYNII 295

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +++GNYGE+F+RN+G++S L I RG N LW+ GGLMY  PIR
Sbjct: 296 KNVGNYGEVFERNVGSKSPLNIKRGLNNLWNNGGLMYPMPIR 337


>gi|87121084|ref|ZP_01076975.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Marinomonas sp. MED121]
 gi|86163576|gb|EAQ64850.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Marinomonas sp. MED121]
          Length = 340

 Score =  354 bits (909), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 150/342 (43%), Positives = 224/342 (65%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M  +    I    +    S    A  L D+K +GF++CG++ G+ GF+   +NG+W G D
Sbjct: 1   MKSNVGKLISTAAVALTVSAGATAGTLDDVKAKGFIQCGVSQGVPGFSNADSNGNWTGID 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA ++A+F D  K+++ PL+AKERF ALQS +ID+LSRNT WT  R+ SLGL F  
Sbjct: 61  VDACRAAAAAVFGDAQKVKFTPLSAKERFTALQSGEIDVLSRNTTWTYTRDTSLGLDFTA 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + ++DGQGF++ K  G+ S  +L GA++C + GTTTEL +AD+F+ H ++Y P+V ++ +
Sbjct: 121 VNFYDGQGFMVRKDLGVDSALELDGATVCTEQGTTTELNMADFFRKHQLEYVPVVVQKAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E  AAY + RCD +T D S L A +      S HVIL + ISK PL P +  GD +W +I
Sbjct: 181 EALAAYASGRCDVFTTDKSGLAAHRSKLADSSAHVILDETISKEPLGPVVRHGDNQWKDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V+W  +  V AEE+GI+  N+ ++  +T +P ++R LG +   ++G  L L  DW Y +I
Sbjct: 241 VTWAMFVQVNAEEMGISSSNVAKIKAETKDPGIRRLLGAE--GDMGAQLSLPADWAYNVI 298

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGE+F+RN+G  + + +PRG N LW++GG+MYAPP+R
Sbjct: 299 AQVGNYGEVFERNVGPSTPVGLPRGINKLWTEGGVMYAPPVR 340


>gi|152998388|ref|YP_001343223.1| extracellular solute-binding protein [Marinomonas sp. MWYL1]
 gi|150839312|gb|ABR73288.1| extracellular solute-binding protein family 3 [Marinomonas sp.
           MWYL1]
          Length = 341

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 161/343 (46%), Positives = 228/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M  +    +    I    S    AS L D+K +GF++CG++TG+ GF+     G+W G D
Sbjct: 1   MKSNVCKLLSTAAIAATISAGAAASTLEDVKAKGFVQCGVSTGVPGFSNADDKGNWTGLD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA++SAIF D  K ++ PL+AKER  ALQS +ID+L+RNT WT  R+ SLGL F  
Sbjct: 61  VDACRAVASAIFGDAQKAKFTPLSAKERLTALQSGEIDVLTRNTTWTYTRDASLGLDFTA 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + ++DGQGF++ K  G+ S   L GA++C + GTTTEL +AD+F+ + + Y P+V ++ +
Sbjct: 121 VNFYDGQGFMVRKDLGVKSAMDLDGATVCTEQGTTTELNMADFFRKNKLSYVPVVVQKAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E  AAY + RCD YT D S L A +     PS HVILP+ ISK PLAP +  GD +W +I
Sbjct: 181 EALAAYDSGRCDVYTTDKSGLAAHRTKLADPSAHVILPETISKEPLAPVVRHGDNQWKDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V+W  +  V AEE+GIT KN+ ++  +T +P ++R LG++   ++G  LGL  DW Y II
Sbjct: 241 VTWALFVQVNAEEMGITSKNVAKIKAETNDPSIKRLLGVE--GDMGSQLGLPADWAYNII 298

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSK-GGLMYAPPIR 342
             +GNYGE+F+RN+G  + L IPRG NALW++ GG+MYAPP+R
Sbjct: 299 AKVGNYGEVFERNIGPSTPLDIPRGLNALWTEAGGIMYAPPVR 341


>gi|115524735|ref|YP_781646.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rhodopseudomonas palustris BisA53]
 gi|115518682|gb|ABJ06666.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rhodopseudomonas palustris BisA53]
          Length = 337

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 166/318 (52%), Positives = 228/318 (71%), Gaps = 3/318 (0%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             L  I+ RG L CG++ GL GF+     G+W G DVD CRA+++A+F+DP+K++++PL+
Sbjct: 23  QTLKTIQDRGVLSCGVSQGLPGFSTPDDKGNWTGLDVDICRAIAAAVFNDPTKVKFVPLS 82

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           AK+RF ALQS +ID+LSRNT WT+ R+ SLG+ F  +TY+DGQGF++ K   ++S  +L+
Sbjct: 83  AKDRFTALQSGEIDVLSRNTTWTISRDTSLGVNFTGVTYYDGQGFLVKKALKVNSALELN 142

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           GASICVQ GTT E  +ADYFK +NMKY  I F   +E   AY A RCD +T D+S LYAL
Sbjct: 143 GASICVQTGTTNEQNVADYFKGNNMKYEVIAFSTADEALKAYEAGRCDVFTSDVSQLYAL 202

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +L     ++H +LP++ISK PL P +  GD +W++IV WT +AM+ AEE G+TQKN+   
Sbjct: 203 RLKLAAVADHAVLPEVISKEPLGPLVRHGDDQWFDIVKWTLFAMINAEEFGVTQKNVEDQ 262

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
           +K    PD++R  G D   N+GE LGLTKDW  RI++  GNYGE+F+RN+G+ S+L I R
Sbjct: 263 AKLDK-PDLKRMFGTD--GNLGEQLGLTKDWVIRIVKATGNYGEVFERNVGSGSKLGIAR 319

Query: 325 GYNALWSKGGLMYAPPIR 342
           G N LW+KGG+ YAPPIR
Sbjct: 320 GLNQLWNKGGIQYAPPIR 337


>gi|242241099|ref|YP_002989280.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
 gi|242133156|gb|ACS87458.1| extracellular solute-binding protein family 3 [Dickeya dadantii
           Ech703]
          Length = 343

 Score =  354 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 165/343 (48%), Positives = 233/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    LF  +   +A   L  I+K+GF++CGI+ GL GF+   A G + G 
Sbjct: 3   MKKVIMSTLVAGASLFALANQAHAGATLDAIQKKGFVQCGISDGLPGFSYADAGGKYTGI 62

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++DILSRNT WT  R+  +GL F 
Sbjct: 63  DVDVCRGVAAAVFGDANKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDGGMGLLFT 122

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFK +NMKY P+ F+R 
Sbjct: 123 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKTNNMKYTPVTFDRS 182

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P+E V+LP++ISK PL P + +GD +W+ 
Sbjct: 183 DESAKALDSGRCDTLASDQSQLYALRIKLGKPTEFVVLPEVISKEPLGPVVRRGDEDWFA 242

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GIT KN++ ++   T PD+   LG +   N G+ L L  DW Y+I
Sbjct: 243 IVRWTLFAMLNAEEMGITSKNVDALAAKPTTPDMAHLLGKE--GNFGKDLKLPNDWAYKI 300

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE+F+RN+G  SELKI RG N LW+KGG+ YAP +R
Sbjct: 301 VKQVGNYGEVFERNVGQGSELKIKRGLNELWNKGGIQYAPAVR 343


>gi|254703267|ref|ZP_05165095.1| hypothetical protein Bsuib36_04929 [Brucella suis bv. 3 str. 686]
 gi|261753898|ref|ZP_05997607.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3
           str. 686]
 gi|261743651|gb|EEY31577.1| extracellular solute-binding protein family 3 [Brucella suis bv. 3
           str. 686]
          Length = 339

 Score =  354 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 166/342 (48%), Positives = 227/342 (66%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  + ++L             A  L  +K+RG + CG++ G+ GF+     G W GFD
Sbjct: 1   MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDGWGKWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+S+A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F  
Sbjct: 61  IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  +
Sbjct: 121 TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            I  A+   RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NI
Sbjct: 181 GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++ AEELGITQK +     D+  PD++RFLG +   + G+ LGL   W Y I+
Sbjct: 241 VRWTLFALLEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIV 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGEMF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 ASVGNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 339


>gi|261819589|ref|YP_003257695.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
 gi|261603602|gb|ACX86088.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
          Length = 341

 Score =  354 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 160/343 (46%), Positives = 233/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +    +++    LF      +A   L  I+K+GF++CGI+ GL GF+   ANG + G 
Sbjct: 1   MKRIVISTLVAGASLFAAINQAHAGTTLDAIQKKGFVQCGISDGLPGFSYADANGKYSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+ F 
Sbjct: 61  DVDVCRGIAAAVFGDANKVKYSPLTAKERFTALQSGEVDVLSRNTTWTSSRDGGMGMLFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G++S  +L GA++C+QAGT TEL +ADYFK H M+Y P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHNKAGLTSAKELDGATVCIQAGTDTELNVADYFKTHKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P+E ++LP++ISK PL P + +GD EW+ 
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSKPAEFIVLPEVISKEPLGPVVRRGDEEWFA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+ +T KN++Q++   T PD+   LG +   + G+ L L  DW ++I
Sbjct: 241 IVRWTLFAMLNAEEMDVTSKNVDQLAAKPTTPDMSHLLGHE--GSYGKDLKLPNDWAFKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNYGE+F+RN+G  SELKI RG N LW+KGG+ YAP +R
Sbjct: 299 IKQVGNYGEIFERNVGMGSELKIKRGLNELWNKGGIQYAPAVR 341


>gi|291619131|ref|YP_003521873.1| YhdW [Pantoea ananatis LMG 20103]
 gi|291154161|gb|ADD78745.1| YhdW [Pantoea ananatis LMG 20103]
 gi|327395461|dbj|BAK12883.1| putative amino-acid ABC transporter-binding protein YhdW precursor
           [Pantoea ananatis AJ13355]
          Length = 349

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 227/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    L   +   +A   L  IKK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 9   MKKMMLSTLVAAASLLAVAQQAHAGPTLDAIKKKGFIQCGISDGLPGFSYADASGKFTGL 68

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA ++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G  F 
Sbjct: 69  DVDICRAAAAAVFGDATKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDGGMGFMFT 128

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ HKK G+ S  +L GA++C+QAGT TEL +AD+FKA+ M+Y P+ F+R 
Sbjct: 129 GVNYYDGIGFLTHKKAGLKSAKELDGATVCIQAGTDTELNVADFFKANKMQYTPVTFDRS 188

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P + ++LP++ISK PL P + +GD +W+ 
Sbjct: 189 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDDFIVLPEVISKEPLGPLVRRGDDDWFT 248

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W+ +AM+ AEE+GI  KN+++++     PD+   LG +   + G+ L L   W Y I
Sbjct: 249 IVKWSLFAMLNAEEMGINSKNVDEMTAKPATPDMAHLLGAE--GDFGKDLKLDNKWAYNI 306

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E FDRN+G  S LKI RG NALW++GG+ YAPP+R
Sbjct: 307 IKQVGNYQESFDRNVGKDSPLKIARGQNALWNQGGIQYAPPVR 349


>gi|113475659|ref|YP_721720.1| extracellular solute-binding protein [Trichodesmium erythraeum
           IMS101]
 gi|110166707|gb|ABG51247.1| extracellular solute-binding protein, family 3 [Trichodesmium
           erythraeum IMS101]
          Length = 343

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 145/318 (45%), Positives = 219/318 (68%), Gaps = 2/318 (0%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  +K RG L CG+  G+ GF+ V  NG++ G DVD C+A+++A+F+DP+ ++Y  L+
Sbjct: 28  SRLDIVKNRGKLICGVEGGIPGFSFVDKNGNYSGIDVDICKAVAAALFNDPNLVEYRNLD 87

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           + ERF AL   ++D+LSRNT WT+ R+ ++GL F P T++DGQG ++    G+ S+  L 
Sbjct: 88  STERFTALNGGEVDMLSRNTTWTVSRDTTVGLEFAPTTFYDGQGMMVRANSGVESLEDLQ 147

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           G SICV+AGTTTEL L D  +  N+    + F++ +   AAY   RCD  T D S L + 
Sbjct: 148 GKSICVEAGTTTELNLTDNLRQRNVTAETLTFQQADPAYAAYAEGRCDGMTSDKSQLLSR 207

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           + T   P++HVIL   +SK PL P     D+ W+++V W  YA++ AEELGITQ+N++ +
Sbjct: 208 RSTLPSPNDHVILQVTMSKEPLGPVTKNNDSAWFDVVKWVTYALIEAEELGITQENVDDL 267

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
            +++ NP ++RFLG+D   ++GE LGL+ D+ YR+I+++GNY E++DRNLG +S+ K+PR
Sbjct: 268 KQNSDNPTIRRFLGVD--GDLGEGLGLSNDFAYRVIKNVGNYAEVYDRNLGEESQFKLPR 325

Query: 325 GYNALWSKGGLMYAPPIR 342
           G N LW+KGGL+Y+PP R
Sbjct: 326 GMNNLWTKGGLLYSPPFR 343


>gi|163733776|ref|ZP_02141218.1| glutamate/glutamine/aspartate/asparagine-binding protein
           [Roseobacter litoralis Och 149]
 gi|161392887|gb|EDQ17214.1| glutamate/glutamine/aspartate/asparagine-binding protein
           [Roseobacter litoralis Och 149]
          Length = 338

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 154/342 (45%), Positives = 222/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +    L I    + +  A  L D+K RG L CG+ TGLVGFA   A+G+W GFD
Sbjct: 1   MKKSVLLG--ALTIAGLAAGAAAAGTLDDVKARGTLNCGVTTGLVGFAAPNADGEWNGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VAICRAVAAAVLGDATAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFTFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G++S  +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVPKSLGVTSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T + P+EHV+LP+IISK PL P +  GD EW ++
Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRATFENPTEHVLLPEIISKEPLGPLVRHGDDEWGDV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A++TAEELG+T  N+++++  + NP+V+R LG +    +GE LGL  DW  + I
Sbjct: 239 VRWTLNALITAEELGVTSANVSEMATGSNNPEVKRLLGSE--GTLGEMLGLEADWAMKAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F +N+G ++ + + RG NA W+ GGL+Y+PP R
Sbjct: 297 ATQGNYGEIFAKNIGEETPIALSRGLNAQWTNGGLIYSPPFR 338


>gi|330811534|ref|YP_004355996.1| Putative amino acid ABC transporter, periplasmic component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327379642|gb|AEA70992.1| Putative amino acid ABC transporter, periplasmic component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 343

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 154/345 (44%), Positives = 220/345 (63%), Gaps = 5/345 (1%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K     +    +L  + F+   + L  ++K+GF++CG++ GL GF+   + G   G
Sbjct: 1   MKLLKSTLAVMTAAAVLGVSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDSTGKIVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D DFCRA+++A+F D +K+++  LNAKERF ALQS +ID+LSRN+  T  R+  +GL F
Sbjct: 61  IDADFCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDMLSRNSTMTSSRDAGMGLKF 120

Query: 119 RPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                +    GF+ + K G+ S  +L GA+IC+QAGTTTEL ++DYF+A+ +KY PI F+
Sbjct: 121 PGFITYYDGIGFLANNKLGVKSAKELDGATICIQAGTTTELNVSDYFRANGLKYTPITFD 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             +E   +  + RCD  T D S L+A +     P ++V+LP+ ISK PL P +  GD EW
Sbjct: 181 TSDESAKSLESGRCDVLTSDKSQLFAQRSKLASPKDYVVLPETISKEPLGPVVRNGDDEW 240

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
             IV WT YA++ AEE G+T KN+   +K T NPDV R LG D     G+ L L KDW  
Sbjct: 241 LAIVRWTGYALLNAEEAGVTSKNVEAEAKSTKNPDVARMLGAD--GEYGKDLKLPKDWVV 298

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +I++ +GNYGEMF+RNLG  + L+I RG NALW+ GG+ YAPP+R
Sbjct: 299 QIVKQVGNYGEMFERNLGKGTPLEIDRGLNALWNAGGIQYAPPVR 343


>gi|282897630|ref|ZP_06305630.1| extracellular solute-binding protein, family 3 [Raphidiopsis
           brookii D9]
 gi|281197553|gb|EFA72449.1| extracellular solute-binding protein, family 3 [Raphidiopsis
           brookii D9]
          Length = 351

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 154/354 (43%), Positives = 231/354 (65%), Gaps = 15/354 (4%)

Query: 1   MYKDFFVSILCLIILFFTSF------------STNASILGDIKKRGFLKCGINTGLVGFA 48
           M K F   ++  +I                  +   +    +K    L CG++  L GF+
Sbjct: 1   MAKSFLFLVVGPLIFALLGCNSSPSSSTSTSTAQPRNTTDKVKTNLRLVCGVSGELPGFS 60

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            V+ +G + G DVD CRA+++A+FD+P K+++  L+AKERF ALQ+ +ID+LSRNT WT 
Sbjct: 61  FVQTDGKYAGIDVDVCRAVAAALFDNPDKVEFRNLSAKERFTALQTGEIDLLSRNTTWTF 120

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+ S+GL F P+  +DGQG ++ K  GI+S++ L   +IC Q GTTTE  LAD  +   
Sbjct: 121 SRDTSMGLYFSPVVLYDGQGIMIRKNSGINSLADLKNKAICTQTGTTTEQNLADQMRKRG 180

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
           + Y P+VFE +    A Y   RCDA T D SAL + + T  +P +++IL +++S  PLAP
Sbjct: 181 ISYKPVVFEDINVTFATYSEGRCDAVTADRSALISRRTTLPKPEDNIILNELLSSEPLAP 240

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288
           A+ QGD +W NIV W+ YA++ AEELGI  +NI+Q   ++ +P+++RFLG +   N+G+ 
Sbjct: 241 AVAQGDPQWNNIVKWSVYALIKAEELGINSQNISQF-ANSKDPEIKRFLGTE--GNLGKG 297

Query: 289 LGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GLT D+  RII+H+GNYGE++DRNLG++++L +PRG N L+SKGGL+Y+PP R
Sbjct: 298 IGLTNDFAARIIKHVGNYGEIYDRNLGSKTKLNLPRGQNELYSKGGLLYSPPFR 351


>gi|50119205|ref|YP_048372.1| general L-amino ABC transporter binding protein [Pectobacterium
           atrosepticum SCRI1043]
 gi|227114001|ref|ZP_03827657.1| general L-amino ABC transporter binding protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
 gi|253686635|ref|YP_003015825.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|49609731|emb|CAG73165.1| general L-amino ABC transporter binding protein [Pectobacterium
           atrosepticum SCRI1043]
 gi|251753213|gb|ACT11289.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 341

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 161/343 (46%), Positives = 235/343 (68%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +    +++    LF      +A   L  I+K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKRIVISTLVAGASLFAAINQAHAGATLDAIQKKGFVQCGISDGLPGFSYADASGKYSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR L++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+ F 
Sbjct: 61  DVDVCRGLAAAVFGDANKVKYTPLTAKERFTALQSGEVDVLSRNTTWTSSRDGGMGMLFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G++S  +L GA++C+QAGT TEL +ADYFK H M+Y P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHNKAGLTSAKELDGATVCIQAGTDTELNVADYFKTHKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSKPAEFIVLPEVISKEPLGPVVRRGDEEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+T KN++Q++   T PD+   LG +   + G+ L L  DW ++I
Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVDQLAAKPTTPDMSHLLGHE--GSYGKDLKLPNDWAFKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNYGE+F+RN+G  SELKI RG N LW+KGG+ YAP +R
Sbjct: 299 IKQVGNYGEIFERNVGMGSELKIKRGLNELWNKGGIQYAPAVR 341


>gi|237730186|ref|ZP_04560667.1| amino acid ABC transporter [Citrobacter sp. 30_2]
 gi|226908792|gb|EEH94710.1| amino acid ABC transporter [Citrobacter sp. 30_2]
          Length = 341

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 159/343 (46%), Positives = 231/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    S+    +L   +   +A   L  +KK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMIIASLAAAGVLLAVANQAHAGATLDAVKKKGFVQCGISDGLPGFSYADASGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR ++SA+F D SK++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G++F 
Sbjct: 61  DVDVCRGVASAVFGDDSKVKYTPLTAKERFTALQSGEVDMLSRNTTWTSSRDAGMGMSFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+ MKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+  KN+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGVNSKNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|89092424|ref|ZP_01165378.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Oceanospirillum sp. MED92]
 gi|89083512|gb|EAR62730.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Oceanospirillum sp. MED92]
          Length = 354

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 168/342 (49%), Positives = 232/342 (67%), Gaps = 5/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    S++   +    SF   A  L D++KRG + CG++TGL GF++   NG W G D
Sbjct: 18  MKR--LTSVIATGLALGLSFGAQAGTLEDVQKRGSVSCGVSTGLAGFSQKDENGTWSGLD 75

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CR++++A+  D SK+QY PL AKERF ALQS +IDILSRNT WT  R+ SLGL F  
Sbjct: 76  VDVCRSVAAAVLGDASKVQYKPLTAKERFTALQSGEIDILSRNTTWTHTRDTSLGLNFAG 135

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS   L GA++C+QAGTTTEL LADYF+A+ + Y+ I F+  +
Sbjct: 136 VNYYDGQGFMVSKDLGVSSALDLDGAAVCIQAGTTTELNLADYFRANGITYNAITFDTSD 195

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +  A + + RCD  T D S LYAL++    PS  ++LP++ISK PL P + QGD +W+NI
Sbjct: 196 QTRAGFESGRCDVLTSDQSQLYALRIGLKDPSSAMVLPEVISKEPLGPVVRQGDDQWFNI 255

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+ YAMV AE +GI   N +Q +K   NP  QR +G+D   + GE +G++ DW Y I+
Sbjct: 256 VKWSVYAMVEAEFMGINSANADQ-AKSQGNPGQQRLMGVDT--DSGEKMGISNDWAYNIV 312

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+RN+G  S LKI RG NA W+KGG+MY+ P+R
Sbjct: 313 KQVGNYGESFERNVGQGSPLKISRGLNAQWNKGGIMYSSPVR 354


>gi|251791415|ref|YP_003006136.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
 gi|247540036|gb|ACT08657.1| extracellular solute-binding protein family 3 [Dickeya zeae
           Ech1591]
          Length = 343

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 165/343 (48%), Positives = 234/343 (68%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    LF      +A   L  I+K+GF++CGI+ GL GF+   ANG + G 
Sbjct: 3   MKKVIMSTLVASASLFAFINQAHAGATLDAIQKKGFVQCGISDGLPGFSYADANGKYSGI 62

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++AIF D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +GL F 
Sbjct: 63  DVDVCRGVAAAIFGDANKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDGGMGLLFT 122

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFK HNMKY P+ F+R 
Sbjct: 123 GVTYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKTHNMKYTPVTFDRS 182

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P++ V+LP++ISK PL P + +GD +W+ 
Sbjct: 183 DESAKALDSGRCDTLASDQSQLYALRIKLGKPADFVVLPEVISKEPLGPVVRRGDEDWFA 242

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GIT +N++Q++   T PD+   LG +   N G+ L L  DW ++I
Sbjct: 243 IVRWTLFAMLNAEEMGITSQNVDQMAAKPTTPDMAHLLGKE--GNFGKDLKLPADWAFKI 300

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE+F+RN+G  SELKI RG N LW+KGG+ YAP +R
Sbjct: 301 VKQVGNYGEVFERNVGQGSELKIKRGLNELWNKGGIQYAPTVR 343


>gi|312959110|ref|ZP_07773629.1| extracellular solute-binding protein, family 3 [Pseudomonas
           fluorescens WH6]
 gi|311286880|gb|EFQ65442.1| extracellular solute-binding protein, family 3 [Pseudomonas
           fluorescens WH6]
          Length = 343

 Score =  352 bits (903), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 154/345 (44%), Positives = 220/345 (63%), Gaps = 5/345 (1%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K     +    +L  + F+   + L  ++K+GF++CG++ GL GF+   A+G   G
Sbjct: 1   MKVLKSTLAIVCAAAVLGVSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDASGKILG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D D CRA+++A+F D +K+++  LNAKERF ALQS ++DILSRNT  T  R+  +GL F
Sbjct: 61  IDADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDILSRNTTMTSSRDAGMGLKF 120

Query: 119 RPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                +    GF+++ K G+ S  +L GA+IC+QAGTTTEL ++DYF+ + +KY PI F+
Sbjct: 121 PGFITYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNGLKYTPITFD 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             +E   +  + RCD  T D S L+A +     P ++V+LP+ ISK PL P +  GD EW
Sbjct: 181 TSDESAKSLESGRCDVLTSDKSQLFAQRSKLASPKDYVVLPETISKEPLGPVVRNGDDEW 240

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
             IV W  YAM+ AEE GIT KN+   +K T NPDV R LG D     G+ L + KDW  
Sbjct: 241 LAIVRWVGYAMLNAEEAGITSKNVEAEAKSTKNPDVARLLGAD--GEYGKDLKVKKDWVV 298

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +I++ +GNYGE+F+RNLG  + L+I RG NALW+KGG+ YAPP+R
Sbjct: 299 QIVKQVGNYGEVFERNLGKSTPLEIDRGLNALWNKGGIQYAPPVR 343


>gi|119897622|ref|YP_932835.1| putative amino acid-binding protein [Azoarcus sp. BH72]
 gi|119670035|emb|CAL93948.1| putative amino acid-binding protein [Azoarcus sp. BH72]
          Length = 344

 Score =  352 bits (903), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 159/347 (45%), Positives = 230/347 (66%), Gaps = 8/347 (2%)

Query: 1   MYKDFF----VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K          L        + +   + L  IK++G L CG+++G+ GF+   + G+W
Sbjct: 1   MKKSLRRIAPAVALGFAATLSATAAHAGATLDQIKRKGELACGVSSGVPGFSATDSRGNW 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G DVD CRAL++A+  D +K++++PL +++RF ALQ+ ++DILSRNT WTL R+ SLGL
Sbjct: 61  SGLDVDVCRALAAAVLGDANKVKWVPLGSQQRFSALQAGEVDILSRNTTWTLTRDASLGL 120

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           AF  ITY+DGQGF++ K   ++S  QL  A ICVQ+GTTTE  LADYF+   ++  P+VF
Sbjct: 121 AFTAITYYDGQGFLVPKSIKVTSAKQLRDAEICVQSGTTTEKNLADYFRRQGIRVKPVVF 180

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDT 235
           E+ +    A+   RC AYT D S+L  ++     +P +++ILP+ ISK PL P + +GD 
Sbjct: 181 EKFDASLKAFFNGRCVAYTTDASSLAGIRAGEAPKPDDYLILPETISKEPLGPIVRRGDD 240

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295
           EW+ IV W  YA++ AEELG+T+ N ++ +    +P V R LG  K+ ++G+ LGL   W
Sbjct: 241 EWFTIVKWVVYALIEAEELGVTRDNADKQAAG-GDPAVGRLLG--KTEDLGKPLGLDAQW 297

Query: 296 TYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            YR +R +GNYGE+F+RNLG  S L++PRG NALWS+GGLMYAPP+R
Sbjct: 298 AYRAVRAVGNYGEVFERNLGAGSPLRLPRGQNALWSQGGLMYAPPLR 344


>gi|149913099|ref|ZP_01901633.1| hypothetical protein RAZWK3B_03885 [Roseobacter sp. AzwK-3b]
 gi|149813505|gb|EDM73331.1| hypothetical protein RAZWK3B_03885 [Roseobacter sp. AzwK-3b]
          Length = 338

 Score =  352 bits (903), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 154/342 (45%), Positives = 220/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +    L I   ++ +  A+ L D+K RG L CG+ TGLVGFA   ANG+W+GFD
Sbjct: 1   MKKTVILG--ALTIAGLSAGAAAAATLDDVKARGKLNCGVTTGLVGFAAPDANGEWQGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  DP+ ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VGVCRAVAAAVLGDPTAVEFVPTTGKTRFTALASGEIDLLARNTTWTFSRDVDLKFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y+DGQGF++ K  G++S  +L GA++C+Q GTTTEL LAD+F+ +N+ Y P+  E   
Sbjct: 119 INYYDGQGFMVPKSLGVTSAKELDGATVCIQTGTTTELNLADFFRVNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y    CD YT D S L A +   + PSEHVILP+IISK PL P +  GD+EW +I
Sbjct: 179 EAQPLYLEGACDVYTTDASGLAATRAAFETPSEHVILPEIISKEPLGPLVRHGDSEWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  A++ AEE G+T  N+ +++  T NP++ R LG +    +GE LGL  +W  R I
Sbjct: 239 ARWTLNALIAAEEYGVTSANVAELANGTDNPEINRLLGTE--GTLGEMLGLDAEWAKRAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F++N+G  + + + RG NA W++GGL+Y+PP R
Sbjct: 297 MAGGNYGELFEKNIGENTPIGLSRGLNAQWTEGGLLYSPPFR 338


>gi|149191354|ref|ZP_01869607.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio shilonii AK1]
 gi|148834833|gb|EDL51817.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio shilonii AK1]
          Length = 342

 Score =  352 bits (903), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 170/345 (49%), Positives = 233/345 (67%), Gaps = 6/345 (1%)

Query: 1   MYKDFFV---SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   +    +     +  TS S     L  + K G L CG++TGL GF+   + G+W+
Sbjct: 1   MAKKLTLIASLVAASAAMMSTSASAADGTLDKVTKAGVLTCGVSTGLPGFSNPNSKGEWE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV++C+AL++A+  D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL 
Sbjct: 61  GIDVEYCQALAAAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDSALGLN 120

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F  + Y+DGQGF++ K  G+SS  +L GAS+CVQ+GTTTEL LADYF+ + M+Y P+VF+
Sbjct: 121 FVGVNYYDGQGFMVKKDLGLSSAKELDGASVCVQSGTTTELNLADYFRNNGMEYKPVVFD 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +    + + RCD  T D S LYAL+L    PS  V+LP+IISK PL P + QGD +W
Sbjct: 181 TAAQTSKGFDSGRCDVLTTDQSGLYALRLNLQDPSSAVVLPEIISKEPLGPVVRQGDDQW 240

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
           +NI  WT  AMV AEE GIT KN +++ K + +P+++R LG+D     G+ LG+  DW Y
Sbjct: 241 FNIAKWTLAAMVNAEEYGITSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGY 297

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +II+ +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 298 QIIKQVGNYGESFERTVGEGSPLQISRGVNALWNAGGFMYAPPIR 342


>gi|331684909|ref|ZP_08385501.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli H299]
 gi|331078524|gb|EGI49730.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli H299]
          Length = 341

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 231/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+G ++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGVVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|187730695|ref|YP_001881960.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Shigella boydii CDC 3083-94]
 gi|187427687|gb|ACD06961.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Shigella boydii CDC 3083-94]
 gi|320177109|gb|EFW52125.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Shigella dysenteriae CDC 74-1112]
          Length = 341

 Score =  351 bits (901), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 157/343 (45%), Positives = 233/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR++++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRSVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|157162750|ref|YP_001460068.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli HS]
 gi|170018489|ref|YP_001723443.1| extracellular solute-binding protein [Escherichia coli ATCC 8739]
 gi|170682914|ref|YP_001745538.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Escherichia coli SMS-3-5]
 gi|188493987|ref|ZP_03001257.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli 53638]
 gi|194440030|ref|ZP_03072087.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli 101-1]
 gi|253771901|ref|YP_003034732.1| extracellular solute-binding protein family 3 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254038434|ref|ZP_04872492.1| amino acid ABC transporter [Escherichia sp. 1_1_43]
 gi|256024158|ref|ZP_05438023.1| extracellular solute-binding protein family 3 [Escherichia sp.
           4_1_40B]
 gi|297518104|ref|ZP_06936490.1| extracellular solute-binding protein family 3 [Escherichia coli
           OP50]
 gi|300916765|ref|ZP_07133475.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 115-1]
 gi|300928696|ref|ZP_07144214.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 187-1]
 gi|300946948|ref|ZP_07161179.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 116-1]
 gi|300958250|ref|ZP_07170397.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 175-1]
 gi|301028300|ref|ZP_07191560.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 196-1]
 gi|301647044|ref|ZP_07246876.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 146-1]
 gi|307139956|ref|ZP_07499312.1| extracellular solute-binding protein family 3 [Escherichia coli
           H736]
 gi|312972463|ref|ZP_07786637.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli 1827-70]
 gi|331643968|ref|ZP_08345099.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli H736]
 gi|331654867|ref|ZP_08355867.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli M718]
 gi|157068430|gb|ABV07685.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli HS]
 gi|169753417|gb|ACA76116.1| extracellular solute-binding protein family 3 [Escherichia coli
           ATCC 8739]
 gi|170520632|gb|ACB18810.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli SMS-3-5]
 gi|188489186|gb|EDU64289.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli 53638]
 gi|194421034|gb|EDX37064.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli 101-1]
 gi|226840058|gb|EEH72079.1| amino acid ABC transporter [Escherichia sp. 1_1_43]
 gi|253322945|gb|ACT27547.1| extracellular solute-binding protein family 3 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|299878643|gb|EFI86854.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 196-1]
 gi|300315068|gb|EFJ64852.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 175-1]
 gi|300415951|gb|EFJ99261.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 115-1]
 gi|300453408|gb|EFK17028.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 116-1]
 gi|300463285|gb|EFK26778.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 187-1]
 gi|301074794|gb|EFK89600.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 146-1]
 gi|310334840|gb|EFQ01045.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli 1827-70]
 gi|315617078|gb|EFU97688.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli 3431]
 gi|323936248|gb|EGB32540.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E1520]
 gi|323970317|gb|EGB65587.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli TA007]
 gi|331037439|gb|EGI09663.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli H736]
 gi|331048249|gb|EGI20326.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli M718]
          Length = 341

 Score =  351 bits (901), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 157/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|313500474|gb|ADR61840.1| AapJ [Pseudomonas putida BIRD-1]
          Length = 342

 Score =  351 bits (900), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 161/342 (47%), Positives = 231/342 (67%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +     L   S +   + L  +KK+GF++CG++ GL GF+   A G   G D
Sbjct: 3   MLKTTLAVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS ++D+LSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++KK G+SS  +L GA+IC+QAGTTTEL ++D+F+A+ +KY PI F+  +
Sbjct: 123 VTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +  + RCD  T D S L+A +     P+++V+LP+ ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTDYVVLPETISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE GIT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VKWTLFAMLNAEEAGITSKNVEAEAKATKNPDVARLLGAD--GEYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F++NLG  ++LKI RG NALW+ GG+ YAPP+R
Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342


>gi|300937395|ref|ZP_07152230.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 21-1]
 gi|300457569|gb|EFK21062.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 21-1]
          Length = 354

 Score =  351 bits (900), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 157/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 14  MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 73

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 74  DVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 133

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 134 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 193

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 194 DESAKALESGRCDTLASDQSQLYALRIKLSNPTEWIVLPEVISKEPLGPVVRRGDDEWFS 253

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 254 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 311

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 312 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 354


>gi|323941639|gb|EGB37818.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E482]
          Length = 341

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 231/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + + D EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRADDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|325498846|gb|EGC96705.1| putative amino-acid ABC transporter binding protein yhdW precursor
           [Escherichia fergusonii ECD227]
          Length = 341

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPTEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGVNSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|293416693|ref|ZP_06659332.1| general L-amino acid transport system substrate-binding protein
           [Escherichia coli B185]
 gi|291432049|gb|EFF05032.1| general L-amino acid transport system substrate-binding protein
           [Escherichia coli B185]
          Length = 341

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 157/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIDTLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|288958131|ref|YP_003448472.1| general L-amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
 gi|288910439|dbj|BAI71928.1| general L-amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
          Length = 339

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 168/318 (52%), Positives = 235/318 (73%), Gaps = 4/318 (1%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L  +K+RGF++CG+N GL GF    + G+W G DVD+CRA++ AIF D +K+++ PL+A
Sbjct: 25  TLDTVKQRGFVQCGVNAGLPGFGNPDSAGNWTGLDVDYCRAVAVAIFGDANKVKFTPLSA 84

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
           ++RF A+QS ++D+LSRNT  TL R+ S+GL F P+TY+DGQGF++ KK G+ S  +L+G
Sbjct: 85  QQRFPAIQSGEVDLLSRNTTVTLTRDTSVGLNFAPVTYYDGQGFMVPKKLGVKSAKELNG 144

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           A++CVQ+GTTTEL LADYF+A+NM Y+P+V E  +E++AAY A RCD  T D+S L   +
Sbjct: 145 ATVCVQSGTTTELNLADYFRANNMTYNPVVIESNDEVNAAYFAGRCDVLTTDVSGLAGTR 204

Query: 206 L-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                 P +HVILP++ISK PLAPA+  GD +W++IV WT YA + AEE GIT KNI++ 
Sbjct: 205 AGVAPVPDDHVILPEVISKEPLAPAVRHGDDQWFDIVKWTVYATIQAEEFGITSKNIDEF 264

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
             ++ NPD+QRFLG      +G+A+GL + W Y I++ +GNY E+FDRN+G  + LK+ R
Sbjct: 265 -ANSKNPDIQRFLGTSP--GMGKAMGLDEKWAYNIVKKVGNYAEIFDRNVGPATPLKLER 321

Query: 325 GYNALWSKGGLMYAPPIR 342
           G NALW+KGGLMYA P R
Sbjct: 322 GLNALWTKGGLMYAQPFR 339


>gi|89093226|ref|ZP_01166176.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Oceanospirillum sp. MED92]
 gi|89082522|gb|EAR61744.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Oceanospirillum sp. MED92]
          Length = 337

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 168/342 (49%), Positives = 232/342 (67%), Gaps = 5/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    S++   +    SF   A  L D++KRG + CG++TGL GF++   NG W G D
Sbjct: 1   MKR--LTSVIATGLALGLSFGAQAGTLEDVQKRGSVSCGVSTGLAGFSQKDENGTWSGLD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CR++++A+  D SK+QY PL AKERF ALQS +IDILSRNT WT  R+ SLGL F  
Sbjct: 59  VDVCRSVAAAVLGDASKVQYKPLTAKERFTALQSGEIDILSRNTTWTHTRDTSLGLNFAG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS   L GA++C+QAGTTTEL LADYF+A+ + Y+ I F+  +
Sbjct: 119 VNYYDGQGFMVSKDLGVSSALDLDGAAVCIQAGTTTELNLADYFRANGITYNAITFDTSD 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +  A + + RCD  T D S LYAL++    PS  ++LP++ISK PL P + QGD +W+NI
Sbjct: 179 QTRAGFESGRCDVLTSDQSQLYALRIGLKDPSSAMVLPEVISKEPLGPVVRQGDDQWFNI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+ YAMV AE +GI   N +Q +K   NP  QR +G+D   + GE +G++ DW Y I+
Sbjct: 239 VKWSVYAMVEAEFMGINSANADQ-AKSQGNPGQQRLMGVDT--DSGEKMGISNDWAYNIV 295

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+RN+G  S LKI RG NA W+KGG+MY+ P+R
Sbjct: 296 KQVGNYGESFERNVGQGSPLKISRGLNAQWNKGGIMYSSPVR 337


>gi|159184823|ref|NP_354575.2| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|159140108|gb|AAK87360.2| ABC transporter, substrate binding protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 312

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 166/312 (53%), Positives = 234/312 (75%), Gaps = 1/312 (0%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K +GF+ CG++ G+ GF+     G+W G DVD+CR +++A+F DPSK +++ L++K+RF 
Sbjct: 2   KGKGFVTCGVSAGIPGFSNPDDKGEWSGIDVDYCRGIATAVFGDPSKAKFVALSSKDRFP 61

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           ALQS ++D+L+RNT WT+ R+ SLG  FR + Y+DGQGFI  K   + S  +LSGA++CV
Sbjct: 62  ALQSGEVDVLTRNTTWTISRDTSLGFNFRTVNYYDGQGFIAKKGLNVKSALELSGAAVCV 121

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           Q GTTTEL LADYFK +N++Y+P+VFE+  +  +AY + RCD YT D S LYA++L    
Sbjct: 122 QTGTTTELNLADYFKTNNLQYNPVVFEKESDATSAYDSGRCDVYTTDQSGLYAIRLKLKN 181

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270
           P ++++LP++ISK PL PA+ QGD +W++IV+W HYAMV AEELGIT KN+++  K + N
Sbjct: 182 PDDNIVLPEVISKEPLGPAVRQGDDQWFDIVTWVHYAMVNAEELGITSKNVDE-QKTSAN 240

Query: 271 PDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALW 330
           PDV+R LG ++ + IG  LG+  DW Y I++ +GNYGE+FDRN+G  S LKI RG NALW
Sbjct: 241 PDVKRLLGTEEGTKIGTDLGVGNDWAYNIVKLVGNYGEVFDRNVGAGSPLKIERGQNALW 300

Query: 331 SKGGLMYAPPIR 342
           +KGGL YAPP+R
Sbjct: 301 TKGGLQYAPPVR 312


>gi|194435095|ref|ZP_03067332.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Shigella dysenteriae 1012]
 gi|194416657|gb|EDX32789.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Shigella dysenteriae 1012]
          Length = 341

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 157/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGIDSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|300817474|ref|ZP_07097690.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 107-1]
 gi|300824982|ref|ZP_07105081.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 119-7]
 gi|331670093|ref|ZP_08370938.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli TA271]
 gi|331679342|ref|ZP_08380014.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli H591]
 gi|300522548|gb|EFK43617.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 119-7]
 gi|300529772|gb|EFK50834.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 107-1]
 gi|331063006|gb|EGI34920.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli TA271]
 gi|331073407|gb|EGI44730.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli H591]
          Length = 341

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 158/343 (46%), Positives = 233/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL PA+ +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPAVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|38704156|ref|NP_312168.2| periplasmic binding transport protein [Escherichia coli O157:H7
           str. Sakai]
 gi|157159268|ref|YP_001464743.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli E24377A]
 gi|168752394|ref|ZP_02777416.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4113]
 gi|168758500|ref|ZP_02783507.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4401]
 gi|168764869|ref|ZP_02789876.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4501]
 gi|168769134|ref|ZP_02794141.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4486]
 gi|168777686|ref|ZP_02802693.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4196]
 gi|168783839|ref|ZP_02808846.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4076]
 gi|168786163|ref|ZP_02811170.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC869]
 gi|168802616|ref|ZP_02827623.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC508]
 gi|191169153|ref|ZP_03030911.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli B7A]
 gi|193066465|ref|ZP_03047510.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli E22]
 gi|194430248|ref|ZP_03062745.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli B171]
 gi|195940012|ref|ZP_03085394.1| putative periplasmic binding transport protein [Escherichia coli
           O157:H7 str. EC4024]
 gi|208807576|ref|ZP_03249913.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4206]
 gi|208813206|ref|ZP_03254535.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4045]
 gi|208820750|ref|ZP_03261070.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4042]
 gi|209397538|ref|YP_002272730.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4115]
 gi|217326793|ref|ZP_03442876.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. TW14588]
 gi|254795210|ref|YP_003080047.1| periplasmic-binding component of an ABC superfamily putative amino
           acid transporter [Escherichia coli O157:H7 str. TW14359]
 gi|256018818|ref|ZP_05432683.1| periplasmic-binding component of an ABC superfamily predicted amino
           acid transporter [Shigella sp. D9]
 gi|260846073|ref|YP_003223851.1| putative periplasmic binding transport protein [Escherichia coli
           O103:H2 str. 12009]
 gi|260857395|ref|YP_003231286.1| putative periplasmic binding transport protein [Escherichia coli
           O26:H11 str. 11368]
 gi|260870019|ref|YP_003236421.1| putative periplasmic binding transport protein [Escherichia coli
           O111:H- str. 11128]
 gi|261228273|ref|ZP_05942554.1| periplasmic-binding component of an ABC superfamily predicted amino
           acid transporter [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255131|ref|ZP_05947664.1| putative periplasmic binding transport protein [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291284635|ref|YP_003501453.1| putative amino-acid ABC transporter-binding protein yhdW precursor
           [Escherichia coli O55:H7 str. CB9615]
 gi|293406870|ref|ZP_06650796.1| amino acid ABC transporter [Escherichia coli FVEC1412]
 gi|293412637|ref|ZP_06655360.1| conserved hypothetical protein [Escherichia coli B354]
 gi|293449591|ref|ZP_06664012.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli
           B088]
 gi|298382611|ref|ZP_06992208.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli
           FVEC1302]
 gi|300898040|ref|ZP_07116411.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 198-1]
 gi|300904464|ref|ZP_07122310.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 84-1]
 gi|300925986|ref|ZP_07141809.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 182-1]
 gi|301304263|ref|ZP_07210377.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 124-1]
 gi|301326288|ref|ZP_07219661.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 78-1]
 gi|307314974|ref|ZP_07594562.1| extracellular solute-binding protein family 3 [Escherichia coli W]
 gi|309793849|ref|ZP_07688275.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 145-7]
 gi|13959662|sp|P58068|YHDW_ECO57 RecName: Full=Putative amino-acid ABC transporter-binding protein
           yhdW; Flags: Precursor
 gi|157081298|gb|ABV21006.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli E24377A]
 gi|187767128|gb|EDU30972.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4196]
 gi|188013752|gb|EDU51874.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4113]
 gi|188998861|gb|EDU67847.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4076]
 gi|189354670|gb|EDU73089.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4401]
 gi|189361744|gb|EDU80163.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4486]
 gi|189365193|gb|EDU83609.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4501]
 gi|189373879|gb|EDU92295.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC869]
 gi|189375432|gb|EDU93848.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC508]
 gi|190900795|gb|EDV60586.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli B7A]
 gi|192925894|gb|EDV80543.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli E22]
 gi|194411719|gb|EDX28044.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli B171]
 gi|208727377|gb|EDZ76978.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4206]
 gi|208734483|gb|EDZ83170.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4045]
 gi|208740873|gb|EDZ88555.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4042]
 gi|209158938|gb|ACI36371.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. EC4115]
 gi|217319160|gb|EEC27585.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli O157:H7 str. TW14588]
 gi|254594610|gb|ACT73971.1| periplasmic-binding component of an ABC superfamily predicted amino
           acid transporter [Escherichia coli O157:H7 str. TW14359]
 gi|257756044|dbj|BAI27546.1| putative periplasmic binding transport protein [Escherichia coli
           O26:H11 str. 11368]
 gi|257761220|dbj|BAI32717.1| putative periplasmic binding transport protein [Escherichia coli
           O103:H2 str. 12009]
 gi|257766375|dbj|BAI37870.1| putative periplasmic binding transport protein [Escherichia coli
           O111:H- str. 11128]
 gi|290764508|gb|ADD58469.1| Putative amino-acid ABC transporter-binding protein yhdW precursor
           [Escherichia coli O55:H7 str. CB9615]
 gi|291322681|gb|EFE62110.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli
           B088]
 gi|291426876|gb|EFE99908.1| amino acid ABC transporter [Escherichia coli FVEC1412]
 gi|291469408|gb|EFF11899.1| conserved hypothetical protein [Escherichia coli B354]
 gi|298277751|gb|EFI19267.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli
           FVEC1302]
 gi|300358259|gb|EFJ74129.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 198-1]
 gi|300403626|gb|EFJ87164.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 84-1]
 gi|300417930|gb|EFK01241.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 182-1]
 gi|300840389|gb|EFK68149.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 124-1]
 gi|300846989|gb|EFK74749.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 78-1]
 gi|306905557|gb|EFN36089.1| extracellular solute-binding protein family 3 [Escherichia coli W]
 gi|308122806|gb|EFO60068.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 145-7]
 gi|315257196|gb|EFU37164.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 85-1]
 gi|320181542|gb|EFW56460.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Shigella boydii ATCC 9905]
 gi|320189617|gb|EFW64276.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Escherichia coli O157:H7 str. EC1212]
 gi|320639914|gb|EFX09505.1| putative amino-acid ABC transporter-binding protein yhdW precursor
           [Escherichia coli O157:H7 str. G5101]
 gi|320645630|gb|EFX14639.1| putative amino-acid ABC transporter-binding protein yhdW precursor
           [Escherichia coli O157:H- str. 493-89]
 gi|320650940|gb|EFX19397.1| putative amino-acid ABC transporter-binding protein yhdW precursor
           [Escherichia coli O157:H- str. H 2687]
 gi|320656321|gb|EFX24233.1| putative amino-acid ABC transporter-binding protein yhdW precursor
           [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320662011|gb|EFX29419.1| putative amino-acid ABC transporter-binding protein yhdW precursor
           [Escherichia coli O55:H7 str. USDA 5905]
 gi|320666847|gb|EFX33826.1| putative amino-acid ABC transporter-binding protein yhdW precursor
           [Escherichia coli O157:H7 str. LSU-61]
 gi|323154488|gb|EFZ40689.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli EPECa14]
 gi|323162953|gb|EFZ48788.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli E128010]
 gi|323173472|gb|EFZ59101.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli LT-68]
 gi|323178551|gb|EFZ64127.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli 1180]
 gi|323183028|gb|EFZ68427.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli 1357]
 gi|323376846|gb|ADX49114.1| extracellular solute-binding protein family 3 [Escherichia coli
           KO11]
 gi|323946885|gb|EGB42901.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H120]
 gi|324009098|gb|EGB78317.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 57-2]
 gi|324020751|gb|EGB89970.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 117-3]
 gi|324119448|gb|EGC13331.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli E1167]
 gi|326337965|gb|EGD61799.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Escherichia coli O157:H7 str. 1125]
 gi|326347534|gb|EGD71259.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Escherichia coli O157:H7 str. 1044]
 gi|332086450|gb|EGI91597.1| general L-amino acid-binding periplasmic protein aapJ [Shigella
           dysenteriae 155-74]
 gi|332087261|gb|EGI92394.1| general L-amino acid-binding periplasmic protein aapJ [Shigella
           boydii 5216-82]
 gi|332102250|gb|EGJ05596.1| amino acid ABC transporter [Shigella sp. D9]
          Length = 341

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 157/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|86605966|ref|YP_474729.1| polar amino acid ABC transporter amino acid-binding protein
           [Synechococcus sp. JA-3-3Ab]
 gi|86608412|ref|YP_477174.1| polar amino acid ABC transporter periplasmic amino acid-binding
           protein [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86554508|gb|ABC99466.1| polar amino amino acid ABC transporter (PAAT) family, amino
           acid-binding protein [Synechococcus sp. JA-3-3Ab]
 gi|86556954|gb|ABD01911.1| polar amino amino acid ABC transporter (PAAT) family, periplasmic
           amino acid-binding protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 345

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 145/332 (43%), Positives = 214/332 (64%), Gaps = 6/332 (1%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
            + +    +++    +   IK RG L CG+N  L GF  +   G + GFD+D CRA+++A
Sbjct: 20  SMGLQSLPAWAQLGPLTDRIKARGELICGVNNQLPGFGNLDDQGKYVGFDIDICRAVAAA 79

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +F DP K++Y+ L A  R  A+QS ++D++SRNT WTL R+    + F P TY+DGQGF+
Sbjct: 80  LFGDPDKVRYVYLTAANRQSAIQSGEVDMISRNTTWTLTRDREWAVTFGPTTYYDGQGFM 139

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
           + K  G+  +  L+GA+ICV AGTTTEL LAD F+A  + + P+ F+  +    AY   R
Sbjct: 140 VRKSLGVEKLEDLNGATICVIAGTTTELNLADTFRARGIAFTPVTFDGDDSSFNAYEEGR 199

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           CDA T D SAL + + +   P +HVILP++ISK PL P +  GD  + +I++WT YA+  
Sbjct: 200 CDAITSDQSALISRRASLASPDDHVILPEVISKEPLGPLVPHGDESFSDIMNWTVYALFY 259

Query: 251 AEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMF 310
           AEE GIT  N+++  K + +PD++RFLG +   N+GE LGL  DW   +I+ +GNYGE+F
Sbjct: 260 AEEKGITSANVDEFLK-SEDPDIRRFLGQE--GNLGELLGLKPDWVVNVIKAVGNYGEIF 316

Query: 311 DRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +R+L   + L +PRG N  ++KGG+ YAPP R
Sbjct: 317 NRHL---TPLGVPRGLNQPYTKGGIQYAPPFR 345


>gi|320202178|gb|EFW76753.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Escherichia coli EC4100B]
          Length = 341

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 157/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMTHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|301022227|ref|ZP_07186142.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 69-1]
 gi|331674783|ref|ZP_08375542.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli TA280]
 gi|284923282|emb|CBG36376.1| Putative ABC transporter, substrate-binding protein [Escherichia
           coli 042]
 gi|300397640|gb|EFJ81178.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 69-1]
 gi|323966446|gb|EGB61880.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli M863]
 gi|323979012|gb|EGB74090.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli TW10509]
 gi|324115128|gb|EGC09092.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           fergusonii B253]
 gi|327251362|gb|EGE63051.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli STEC_7v]
 gi|331068222|gb|EGI39618.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli TA280]
          Length = 341

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGVNSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|229588541|ref|YP_002870660.1| putative amino acid ABC transporter substrate-binding protein
           [Pseudomonas fluorescens SBW25]
 gi|229360407|emb|CAY47264.1| putative amino acid ABC transport system, substrate-binding protein
           [Pseudomonas fluorescens SBW25]
          Length = 343

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 154/345 (44%), Positives = 220/345 (63%), Gaps = 5/345 (1%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M   K     +    +L  + F+   + L  ++K+GF++CG++ GL GF+   A+G   G
Sbjct: 1   MKVLKSTLAIVSAAAVLGVSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDASGKILG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            D D CRA+++A+F D +K+++  LNAKERF ALQS ++DILSRNT  T  R+  +GL F
Sbjct: 61  IDADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDILSRNTTMTSSRDAGMGLKF 120

Query: 119 RPITYFDG-QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
                +    GF+++ K G+ S  +L GA+IC+QAGTTTEL ++DYF+ +N+KY PI F+
Sbjct: 121 PGFITYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNNLKYTPITFD 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             +E   +  + RCD  T D S L+A +     P ++V+LP+ ISK PL P +  GD EW
Sbjct: 181 TSDESAKSLESGRCDVLTSDKSQLFAQRSKLAAPKDYVVLPETISKEPLGPVVRNGDDEW 240

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
             IV W  YAM+ AEE GIT KN+   +K T NPDV R LG D     G+ L + KDW  
Sbjct: 241 LAIVRWVGYAMLNAEEAGITSKNVEAEAKSTKNPDVARLLGAD--GEYGKDLKVKKDWVV 298

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +I++ +GNYGE+F+RNLG  + L+I RG NALW+ GG+ YAPP+R
Sbjct: 299 QIVKQVGNYGEVFERNLGKSTPLEIDRGLNALWNNGGIQYAPPVR 343


>gi|26988032|ref|NP_743457.1| general amino acid ABC transporter, periplasmic binding protein
           [Pseudomonas putida KT2440]
 gi|24982752|gb|AAN66921.1|AE016320_9 general amino acid ABC transporter, periplasmic binding protein
           [Pseudomonas putida KT2440]
          Length = 342

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 162/342 (47%), Positives = 231/342 (67%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +     L   S +   + L  +KK+GF++CG++ GL GF+   A G   G D
Sbjct: 3   MLKTTLAVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS ++D+LSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++KK G+SS  +L GA+IC+QAGTTTEL ++D+F+A+ +KY PI F+  +
Sbjct: 123 VTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +  + RCD  T D S L+A +     P+E+V+LP+ ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE GIT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VKWTLFAMLNAEEAGITSKNVEAEAKATKNPDVARLLGAD--GEYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F++NLG  ++LKI RG NALW+ GG+ YAPP+R
Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342


>gi|326797351|ref|YP_004315171.1| ABC-type transporter periplasmic subunit family 3 [Marinomonas
           mediterranea MMB-1]
 gi|326548115|gb|ADZ93335.1| ABC-type transporter, periplasmic subunit family 3 [Marinomonas
           mediterranea MMB-1]
          Length = 340

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 150/342 (43%), Positives = 227/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M  +    +    I    S +  A+ L D+K +GF++CG++ G+ GF+     G+W G D
Sbjct: 1   MKSNMSKILTTAAIAATVSATAGAATLDDVKSKGFIQCGVSQGVPGFSNADEAGNWSGID 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA ++A+F D   +++ PL+AKERF ALQS +ID+LSRNT WT  R+ +LGL F  
Sbjct: 61  VDACRAAAAAVFGDAQAVKFTPLSAKERFTALQSGEIDMLSRNTTWTYTRDTALGLDFTA 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + ++DGQGF++    G++S  +L GA++C + GTTTEL +AD+F+ H + Y P++ ++ +
Sbjct: 121 VNFYDGQGFMVRNDLGVTSAMELDGATVCTEQGTTTELNMADFFRKHGLSYVPVIVQKAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E  AAY + RCD +T D S L A +     PS HVILP+ ISK PL P +  GD +W +I
Sbjct: 181 EALAAYASGRCDVFTTDKSGLAAHRSKLADPSAHVILPETISKEPLGPVVRHGDNQWKDI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V+W  +  V AEE+GI+ KN+ ++  ++ +P ++R LG +   N+GE+LGL  DW Y II
Sbjct: 241 VTWAMFVQVNAEEMGISSKNVAKIKAESKDPAIRRLLGAE--GNMGESLGLGADWAYDII 298

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGE+F+ N+G  + + +PRG N LW++GG+MYAPP+R
Sbjct: 299 AEVGNYGEVFENNVGPNTPVGLPRGINNLWTEGGVMYAPPVR 340


>gi|237799855|ref|ZP_04588316.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331022710|gb|EGI02767.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 322

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 159/324 (49%), Positives = 223/324 (68%), Gaps = 2/324 (0%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
             +   + L  I+K+GF++CG++ GL GF+   +NG   G D D CRA+++A+F D +K+
Sbjct: 1   GAANAGATLDAIQKKGFVQCGVSDGLPGFSVPDSNGKITGIDADVCRAVAAAVFGDATKV 60

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           ++  LNAKERF ALQS +IDILSRNT WT  R+  +GL F  +TY+DG GF+++ K G+ 
Sbjct: 61  KFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTGVTYYDGIGFLVNNKLGVK 120

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +E   +    RCD  T D 
Sbjct: 121 SAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSDESAKSLEGGRCDVLTSDQ 180

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           S LYA +    +P ++V+LP++ISK PL P + +GD EW++IV WT +AM+ AEE  IT 
Sbjct: 181 SQLYAQRSKLAKPDDYVVLPEVISKEPLGPVVRKGDEEWFSIVRWTLFAMLNAEEAKITS 240

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
           KN+   +K T NPDV R LG D     G+ L L KDW  +I++ +GNYGE+F+RNLG  +
Sbjct: 241 KNVEAEAKSTKNPDVARMLGAD--GTYGKDLKLPKDWVVQIVKQVGNYGEVFERNLGENT 298

Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342
            LKI RG NALW+ GG+ YAPPIR
Sbjct: 299 PLKIKRGQNALWNAGGIQYAPPIR 322


>gi|262404012|ref|ZP_06080567.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           RC586]
 gi|262349044|gb|EEY98182.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           RC586]
          Length = 342

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 170/338 (50%), Positives = 232/338 (68%), Gaps = 3/338 (0%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
               I     L   S S   S L  +  +GF+ CG++TGL GF+   A GDW+G DV++C
Sbjct: 8   LASVIAASSALMTYSASAAESTLDKVLSQGFITCGVSTGLPGFSNPNAKGDWEGIDVEYC 67

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           +AL++A+  D +K++++PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  + Y+
Sbjct: 68  QALAAAVLGDKTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYY 127

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           DGQGF++ K  GI S  +L GAS+CVQ+GTTTEL LADYF+ + MKY P+VF+   +   
Sbjct: 128 DGQGFMVKKDLGIKSAKELDGASVCVQSGTTTELNLADYFRNNGMKYKPVVFDTSAQTSK 187

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
            + A RCD  T D S LYAL+L  ++P   V+LP+IISK PL P + Q D +W+N+  W 
Sbjct: 188 GFDAGRCDVLTTDQSGLYALRLNLEKPDAAVVLPEIISKEPLGPVVRQDDDKWFNVAKWV 247

Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304
            YAMV AEE GIT KN++++ K + NP+V+R LG+D     G  LG+  DW+Y+I++ +G
Sbjct: 248 LYAMVNAEEYGITSKNVDEMMK-SENPEVKRILGLDGPKGTG--LGIRDDWSYQIVKQVG 304

Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           NYGE F+R +G+ S LKI RG NALW+ GG MYAPPIR
Sbjct: 305 NYGESFERTVGSGSPLKIDRGVNALWNAGGFMYAPPIR 342


>gi|119489532|ref|ZP_01622293.1| polar amino acid transport system substrate-binding proetin
           [Lyngbya sp. PCC 8106]
 gi|119454611|gb|EAW35758.1| polar amino acid transport system substrate-binding proetin
           [Lyngbya sp. PCC 8106]
          Length = 357

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 136/326 (41%), Positives = 214/326 (65%), Gaps = 3/326 (0%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
                T+ S L  +K RG L CG++ G+ GF+ V  NG++ G DVD C+A+++AIF+DP+
Sbjct: 35  GGGSGTSQSRLDTVKSRGKLVCGVDGGIPGFSFVNENGEYSGLDVDMCKAVAAAIFNDPN 94

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            ++Y  L++ ERF AL+S ++D+LSRNT WT+ R+ S+G+ F P T++DGQG ++ +  G
Sbjct: 95  AVEYRNLDSTERFEALKSGEVDMLSRNTTWTITRDTSVGMEFAPTTFYDGQGMMVRRDSG 154

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I+S+    G ++CV+AGTTTEL L D  +   +      +++ +   AAY    CD  T 
Sbjct: 155 ITSLEDFEGRTVCVEAGTTTELNLTDNMRKAGVNSETKTYQQADPAYAAYAEGACDGMTS 214

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           D S L A + T   P +H++L   +SK PL P  I  D+ W+++V WT +A++  EELGI
Sbjct: 215 DKSQLVARRSTLPNPDDHILLDVTMSKEPLGPVTINNDSAWFDVVKWTTFALIEGEELGI 274

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
            Q N++Q+ K +  P ++RFLGI+   ++G+ LGL  ++   +I+ +GNYGE+++RNLG 
Sbjct: 275 NQANVDQL-KSSEEPTIRRFLGIE--GDLGQGLGLDNEFAANVIKQVGNYGEIYERNLGQ 331

Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342
            S+ ++ RG NALW+ GGL+Y+PP R
Sbjct: 332 GSQFRLDRGQNALWNNGGLLYSPPFR 357


>gi|331664877|ref|ZP_08365782.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli TA143]
 gi|331058125|gb|EGI30107.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli TA143]
          Length = 341

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 157/343 (45%), Positives = 231/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++   +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKEANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|104783492|ref|YP_609990.1| general amino acid ABC transporter periplasmic binding protein
           [Pseudomonas entomophila L48]
 gi|95112479|emb|CAK17206.1| general amino acid ABC transporter, periplasmic binding protein
           [Pseudomonas entomophila L48]
          Length = 342

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 232/342 (67%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +     L  TSF+   + L  +KK+GF++CG++ GL GF+   A G   G D
Sbjct: 3   MLKTTLAVLTAAAALGATSFAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS ++D+LSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+ +KK G+SS  +L GA+IC+QAGTTTEL ++DYF+A+ +KY PI F+  +
Sbjct: 123 VTYYDGVGFLANKKLGVSSAKELDGATICIQAGTTTELNVSDYFRANGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +  + RCD  T D S L+A +     P+E+V+LP+ ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE GIT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VKWTLFAMLNAEEAGITSKNVEAEAKSTKNPDVARLLGAD--GEYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F++NLG  ++LKI RG NALW+ GG+ YAPP+R
Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342


>gi|13959721|sp|P45766|YHDW_ECOLI RecName: Full=Putative amino-acid ABC transporter-binding protein
           yhdW; Flags: Precursor
          Length = 341

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 157/343 (45%), Positives = 231/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +    A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAXAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|170720090|ref|YP_001747778.1| extracellular solute-binding protein [Pseudomonas putida W619]
 gi|169758093|gb|ACA71409.1| extracellular solute-binding protein family 3 [Pseudomonas putida
           W619]
          Length = 342

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 160/342 (46%), Positives = 230/342 (67%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +     L   S +   + L  +KK+GF++CG++ GL GF+   A G   G D
Sbjct: 3   MLKTTLAVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS ++D+LSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++KK G+SS  +L GA+IC+QAGTTTEL ++DYF+A+ +KY PI F+  +
Sbjct: 123 VTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDYFRANGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +  + RCD  T D S L+A +     P+++V+LP+ ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAGPTDYVVLPETISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE G+T KN+   +K T NPD  R LG D     G+ L L KDW  +I+
Sbjct: 243 VKWTLFAMLNAEEAGVTSKNVEAEAKSTKNPDTARLLGAD--GEYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F++NLG  ++LKI RG NALW+ GG+ YAPP+R
Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342


>gi|84499808|ref|ZP_00998096.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Oceanicola
           batsensis HTCC2597]
 gi|84392952|gb|EAQ05163.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Oceanicola
           batsensis HTCC2597]
          Length = 339

 Score =  350 bits (897), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 159/343 (46%), Positives = 224/343 (65%), Gaps = 5/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L +    + +  A+ L D+K RG L CG++TGL GF+   ANG+W+GFD
Sbjct: 1   MKKSVFLG--ALTVAGLAAGAAAAATLDDVKARGTLNCGVSTGLAGFSAPNANGEWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  DP+ ++++P   K RF AL S +ID+L+RNT WTL R+  L   F  
Sbjct: 59  VAVCRAVATAVLGDPNAVEFVPTTGKTRFTALASGEIDMLARNTTWTLSRDADLKFTFIG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGFI  K  G+SS  +L GA++C+Q GTTTEL LAD+F+ +N+ Y P+  E   
Sbjct: 119 VNYYDGQGFITPKALGVSSAKELDGATVCIQTGTTTELNLADFFRVNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T + P++HVILP+IISK PL P +  GD+EW ++
Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFETPTDHVILPEIISKEPLGPLVRHGDSEWGDV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTN-PDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           V W+  AM+ AEELG+T  N+ ++S  TT+ P++ R LG +   N+GE LGL  DW   I
Sbjct: 239 VRWSLNAMIAAEELGVTSANVEEMSSSTTDNPEINRLLGTE--GNLGEMLGLEADWAKNI 296

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I  +GNYGE+F+ N+G  + + + RG NA W+ GGL+YAPP R
Sbjct: 297 IMQVGNYGEVFEANIGESTPIGLARGLNAQWTDGGLLYAPPFR 339


>gi|260778552|ref|ZP_05887444.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260604716|gb|EEX31011.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 342

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 171/342 (50%), Positives = 232/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++     L  TS S   S L  + K+GFL CG++TGL GF+   + G+W+G D
Sbjct: 4   KLTLLASVVAASTALMSTSASAADSTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL+SA+  D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQALASAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+ S  +L GAS+CVQ+GTTTEL LADYF+ + M Y P+VF+   
Sbjct: 124 VNYYDGQGFMVKKDLGLKSAKELDGASVCVQSGTTTELNLADYFRNNGMSYKPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W+NI
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPSSAEVLPEIISKEPLGPVVRQGDDQWFNI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AMV AEE GI+ KN +++ K + +P+V+R LG+D     G+ LG+  DW Y++I
Sbjct: 244 AKWTLSAMVNAEEYGISSKNADEMLK-SKDPNVKRILGVD--GPKGKGLGIRDDWGYQVI 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGKGSPLQISRGVNALWNAGGFMYAPPIR 342


>gi|77462291|ref|YP_351795.1| ABC glutamate/glutamine/aspartate/asparagine transporter,
           periplasmic substrate-binding protein [Rhodobacter
           sphaeroides 2.4.1]
 gi|221638145|ref|YP_002524407.1| Cationic amino acid ABC transporter periplasmic binding protein
           [Rhodobacter sphaeroides KD131]
 gi|77386709|gb|ABA77894.1| ABC glutamate/glutamine/aspartate/asparagine transporter,
           periplasmic substrate-binding protein [Rhodobacter
           sphaeroides 2.4.1]
 gi|221158926|gb|ACL99905.1| Cationic amino acid ABC transporter, periplasmic binding protein
           precursor [Rhodobacter sphaeroides KD131]
          Length = 338

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 149/342 (43%), Positives = 219/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L +    +   +A+ L D+K RG L CG++TGL GF+   ANG+W GFD
Sbjct: 1   MTKSVFLG--TLTVAGLAAGLASAATLDDVKARGELNCGVSTGLTGFSLPDANGNWTGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D +K++++P   + RF AL S ++D+L+RN+ WT  R+  L L F  
Sbjct: 59  VSLCRAVAAAVLGDGTKVKFVPTTGQTRFTALASGEVDMLARNSTWTFSRDTDLKLDFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G++S  +L GA++C+Q GTTTEL LAD+FK +N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVRKDLGVTSAKELDGATVCIQTGTTTELNLADWFKVNNLSYTPVAVETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E +  Y A  CDAYT D S L A +     P  H+ILP+IISK PL PA+  GD EW +I
Sbjct: 179 EGEQQYAAGACDAYTTDASGLAATRAAFADPENHIILPEIISKEPLGPAVRHGDNEWADI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A++ AEE G+T  N+ +++ ++ NP++QR LG+    ++G+ + L  DW  R I
Sbjct: 239 VRWTLNALIAAEEYGVTSANMEELAANSPNPEIQRLLGV--QGDLGKMIRLDNDWAKRAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F   +G  + + + RG NA W++GGL+YAPP R
Sbjct: 297 AVGGNYGEIFAATIGEATPIGLARGLNAQWTQGGLLYAPPFR 338


>gi|148549630|ref|YP_001269732.1| extracellular solute-binding protein [Pseudomonas putida F1]
 gi|148513688|gb|ABQ80548.1| extracellular solute-binding protein, family 3 [Pseudomonas putida
           F1]
          Length = 342

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 161/342 (47%), Positives = 231/342 (67%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +     L   S +   + L  +KK+GF++CG++ GL GF+   A G   G D
Sbjct: 3   MLKTTLAVLTAAAALGAVSTAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS ++D+LSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFRDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++KK G+SS  +L GA+IC+QAGTTTEL ++D+F+A+ +KY PI F+  +
Sbjct: 123 VTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +  + RCD  T D S L+A +     P+++V+LP+ ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTDYVVLPETISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE GIT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VKWTLFAMLNAEEAGITSKNVEAEAKATKNPDVARLLGAD--GEYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F++NLG  ++LKI RG NALW+ GG+ YAPP+R
Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342


>gi|319793876|ref|YP_004155516.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
 gi|315596339|gb|ADU37405.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
          Length = 344

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 154/346 (44%), Positives = 227/346 (65%), Gaps = 6/346 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN---ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M   F  +++    L   + +        L  +K+RG +KCG+  G+ GF+     G+W 
Sbjct: 1   MKNRFRPALIAAASLVAFATAAPAFAGKTLDAVKQRGTVKCGVTNGVAGFSAPDTQGNWS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DVD CRA+++A+  D  K+ ++PLN+++RF ALQ+ +IDIL+RNT WTL R+ SLG  
Sbjct: 61  GLDVDTCRAIAAAVLGDAKKVDFVPLNSQQRFSALQAGEIDILARNTTWTLTRDASLGFN 120

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F  ITY+DGQGF++ KK  ++S  QL  A+IC Q+GTT E  ++DYF+A N+    +VFE
Sbjct: 121 FTTITYYDGQGFLVPKKLKVTSAKQLKNATICTQSGTTNEKNVSDYFRAQNIPVKTVVFE 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTE 236
             E    A+ + RC A+T D SAL  L+      P +++ILP++ISK PLAP + +GD E
Sbjct: 181 SFEASFKAFFSGRCQAFTTDASALAGLRNKEAPNPDDYIILPELISKEPLAPLVRRGDDE 240

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296
           W+ I  W   A++ AEE G+TQ N +++   + +P  QR +G     ++G+ LGL KDW+
Sbjct: 241 WFAIAKWVPNALIEAEEAGVTQANADELKASSKDPAQQRLVGT--GEDLGKLLGLDKDWS 298

Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +R I+ +GNYGE+F+RN+G +S LK+PRG N LWSKGGL+YAPP+R
Sbjct: 299 FRAIKAVGNYGEVFERNVGPKSVLKLPRGSNNLWSKGGLIYAPPVR 344


>gi|258544539|ref|ZP_05704773.1| general amino acid ABC superfamily ATP binding cassette
           transporter, periplasmic binding protein
           [Cardiobacterium hominis ATCC 15826]
 gi|258520221|gb|EEV89080.1| general amino acid ABC superfamily ATP binding cassette
           transporter, periplasmic binding protein
           [Cardiobacterium hominis ATCC 15826]
          Length = 350

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 159/342 (46%), Positives = 233/342 (68%), Gaps = 6/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    + L L  L  T+    A  L D+KKRG L+CG+   L GF+    +G W G D
Sbjct: 15  MKKSLLFTALGLATLVQTT---QADTLDDVKKRGELRCGVTQALAGFSVADDSGRWTGLD 71

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRAL+SAIFDDP K+ + P ++KERF  LQS +ID+L+R T WT  R++ +   F  
Sbjct: 72  VDYCRALASAIFDDPEKVSFRPTSSKERFTVLQSGEIDVLARVTTWTTSRDVDMPFDFIG 131

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  GI SV +LSGASIC   GT+TE  +ADYFK++ M+Y P++FE+ E
Sbjct: 132 VNYYDGQGFMVRKDLGIKSVKELSGASICTNTGTSTETNMADYFKSNGMEYKPVIFEKSE 191

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E+ +AY A RCDAY+ D+S LY  +    +P +H+ILP++ISK PL P + Q D  + ++
Sbjct: 192 EVKSAYDAGRCDAYSSDVSGLYVQRKLLAKPDDHIILPEVISKEPLGPLVRQEDPGFKDL 251

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
            +WTH+ MV AEE G+++ N+ ++ K + NP+++R LG++ +    + LG+  D+  +II
Sbjct: 252 AAWTHFCMVNAEEYGVSKANLEEMKK-SDNPNIRRLLGLEANG--ADKLGVGADFCAKII 308

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +H+GNYGE +DRN+G  S L I RG N LW++GG+M+APP+R
Sbjct: 309 KHVGNYGEAYDRNVGKDSPLNIERGLNRLWNQGGIMFAPPLR 350


>gi|51245286|ref|YP_065170.1| amino acid ABC transporter, periplasmic substrate-binding protein
           [Desulfotalea psychrophila LSv54]
 gi|50876323|emb|CAG36163.1| probable amino acid ABC transporter, periplasmic substrate-binding
           protein [Desulfotalea psychrophila LSv54]
          Length = 339

 Score =  349 bits (895), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 162/342 (47%), Positives = 234/342 (68%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       +   +     + + +A+ L  +K++G++  G++  ++GF+   + G W+G D
Sbjct: 1   MKSVCNRLVGAALGSLLLASTVSATTLDVVKEKGYVNAGVSGKVIGFSAPDSQGVWRGMD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDF RA++SAIFDDP+K ++ P+  KE F ALQS +I+IL+RNT WT  R+  LGL F  
Sbjct: 61  VDFVRAVASAIFDDPNKARFTPVAFKEAFAALQSGEIEILARNTTWTFQRDTKLGLEFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             ++DGQGF++HK  G+ S  +L GAS+C Q+GTTTEL +ADYF +H M Y P+V+E  +
Sbjct: 121 PLFYDGQGFLVHKDLGVKSALELDGASVCTQSGTTTELNMADYFASHGMTYLPVVYESAD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y   RCD YT D SAL A +     P +H ILP+IISK PL PA+ QGD +W ++
Sbjct: 181 EATVIYDTGRCDVYTTDSSALAARRTILSNPDDHEILPEIISKEPLGPAVRQGDQQWSDL 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +A++T EELGIT +N++Q+   + N +V+RFLG+D   + G+ +GL+ DW YRII
Sbjct: 241 VRWTLFALITGEELGITSENVDQML-TSENTEVKRFLGVDS--DFGQHIGLSHDWAYRII 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +H+GNY E+F+RN+G+Q+ L + RG NALW+ GGLMYAPPIR
Sbjct: 298 KHVGNYSEVFERNVGSQTALGLDRGLNALWTNGGLMYAPPIR 339


>gi|54309363|ref|YP_130383.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Photobacterium profundum SS9]
 gi|46913799|emb|CAG20581.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Photobacterium profundum SS9]
          Length = 342

 Score =  349 bits (895), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 162/345 (46%), Positives = 237/345 (68%), Gaps = 6/345 (1%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K       +I     LF  + S   + L  + K+G+++CG++ GL GF+   + G+W+
Sbjct: 1   MTKKPSVLLAAIATTSALFAVNASAANTTLEKVMKQGYVQCGVSAGLPGFSNPNSKGEWE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV+FC+A+++A   D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL 
Sbjct: 61  GLDVEFCQAIAAATVGDKTKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDSALGLN 120

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F  ++Y+DGQGF++ K+ G+SS  +L GA++CVQ+GTTTEL LADYF+ + MKY P+VF+
Sbjct: 121 FAGVSYYDGQGFMVKKELGVSSAKELDGAAVCVQSGTTTELNLADYFRVNGMKYSPVVFD 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +    + + RCD  T D S LYAL+L    P+  V+LP++ISK PL P + QGD +W
Sbjct: 181 TAPQTSKGFDSGRCDVLTTDQSGLYALRLNLADPASAVVLPEVISKEPLGPVVRQGDDQW 240

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
           +NIV WT  AM+ AEE G+T  N++++ K++ +P+++R +G+D     G+ LGL  DW Y
Sbjct: 241 FNIVKWTLSAMLNAEEYGVTSANVDKM-KESKDPNIRRLIGLD--GPKGKGLGLNDDWGY 297

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +I++ +GNYGE F+R +G  S LKI RG NALW  GG+ YA PIR
Sbjct: 298 QIVKQVGNYGESFERTVGTGSPLKIERGLNALWKDGGIQYAAPIR 342


>gi|26249860|ref|NP_755900.1| putative amino-acid ABC transporter binding protein yhdW
           [Escherichia coli CFT073]
 gi|110643514|ref|YP_671244.1| putative amino-acid ABC transporter binding protein YhdW precursor
           [Escherichia coli 536]
 gi|191173851|ref|ZP_03035372.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli F11]
 gi|227887996|ref|ZP_04005801.1| amino-acid ABC superfamily ATP binding cassette transporter binding
           protein yhdW precursor [Escherichia coli 83972]
 gi|300979705|ref|ZP_07174655.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 200-1]
 gi|300991067|ref|ZP_07179488.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 45-1]
 gi|301047875|ref|ZP_07194922.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 185-1]
 gi|26110288|gb|AAN82474.1|AE016767_234 Putative amino-acid ABC transporter binding protein yhdW precursor
           [Escherichia coli CFT073]
 gi|110345106|gb|ABG71343.1| putative amino-acid ABC transporter binding protein YhdW precursor
           [Escherichia coli 536]
 gi|190905901|gb|EDV65519.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli F11]
 gi|227835392|gb|EEJ45858.1| amino-acid ABC superfamily ATP binding cassette transporter binding
           protein yhdW precursor [Escherichia coli 83972]
 gi|300300218|gb|EFJ56603.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 185-1]
 gi|300307923|gb|EFJ62443.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 200-1]
 gi|300406988|gb|EFJ90526.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 45-1]
 gi|307555363|gb|ADN48138.1| putative periplasmic amino-acid ABC transporter binding protein
           [Escherichia coli ABU 83972]
 gi|315294821|gb|EFU54164.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 153-1]
 gi|324015878|gb|EGB85097.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 60-1]
          Length = 341

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPTEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W + I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAFNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|149203333|ref|ZP_01880303.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseovarius sp.
           TM1035]
 gi|149143166|gb|EDM31205.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseovarius sp.
           TM1035]
          Length = 339

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 155/343 (45%), Positives = 220/343 (64%), Gaps = 5/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L +    + ++ A+ L D+K RG L CG+ TGLVGFA   ANG W+GFD
Sbjct: 1   MKKTVFLG--ALTVAGLAAGASAAATLDDVKARGKLNCGVTTGLVGFAAPDANGVWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+L+RNT WT  R+  L   F  
Sbjct: 59  VAICRAVAAAVLGDGNAVEFVPTTGKTRFTALASGEIDLLARNTTWTFSRDTDLKFDFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS  +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+  E   
Sbjct: 119 VNYYDGQGFLVPKSLGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L + +   + P +HVILP+IISK PL P +  GD +W +I
Sbjct: 179 EGQQQYLAGACDTYTTDASGLASTRAAFENPGDHVILPEIISKEPLGPLVRHGDNDWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQV-SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           V WT YA+V AEE+GIT  NI ++ +    NP++ R LG +    +G  +GL  DW  R 
Sbjct: 239 VRWTFYALVAAEEMGITSANIGELSAAAGANPEINRILGTE--GELGAMIGLDNDWAKRA 296

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I   GNYGE+F++N+G ++ + + RG NA W++GG+MYAPP R
Sbjct: 297 ISVGGNYGEIFEKNIGEKTPIGLARGLNAQWTQGGIMYAPPFR 339


>gi|90410648|ref|ZP_01218664.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Photobacterium profundum 3TCK]
 gi|90328889|gb|EAS45173.1| putative amino acid ABC transporter, periplasmic amino acid-binding
           protein [Photobacterium profundum 3TCK]
          Length = 342

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 163/345 (47%), Positives = 239/345 (69%), Gaps = 6/345 (1%)

Query: 1   MYKD---FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K     F +I     LF  + S   + L  + K+G+++CG++ GL GF+   + G+W+
Sbjct: 1   MAKKSSVLFAAIATTSALFAVNASAANTTLEKVMKQGYVQCGVSAGLPGFSNPNSKGEWE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV+FC+A+++A   D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL 
Sbjct: 61  GLDVEFCQAIAAATVGDKTKVKYIPLTAKERFTALQSGEIDVLSRNTTWTLHRDSALGLN 120

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F  ++Y+DGQGF++ K+ G+SS  +L GA++CVQ+GTTTEL LADYF+ + MKY P+VF+
Sbjct: 121 FAGVSYYDGQGFMVKKELGVSSAKELDGAAVCVQSGTTTELNLADYFRVNGMKYSPVVFD 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +    + + RCD  T D S LYAL+L    P+  V+LP++ISK PL P + QGD +W
Sbjct: 181 TAPQTSKGFDSGRCDVLTTDQSGLYALRLNLAEPASAVVLPEVISKEPLGPVVRQGDDQW 240

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
           +NIV WT  AM+ AEE G+T  N++++ K++ +P+++R +G+D     G+ LGL+ DW Y
Sbjct: 241 FNIVKWTLSAMLNAEEYGVTSANVDKM-KESKDPNIRRLIGLD--GPKGKGLGLSDDWGY 297

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +I++ +GNYGE F+R +G  S LKI RG NALW  GG+ YA PIR
Sbjct: 298 QIVKQVGNYGESFERTVGTGSPLKIERGLNALWKDGGIQYAAPIR 342


>gi|167035543|ref|YP_001670774.1| extracellular solute-binding protein [Pseudomonas putida GB-1]
 gi|166862031|gb|ABZ00439.1| extracellular solute-binding protein family 3 [Pseudomonas putida
           GB-1]
          Length = 342

 Score =  348 bits (894), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 161/342 (47%), Positives = 231/342 (67%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +     L   S +   + L  +KK+GF++CG++ GL GF+   A G   G D
Sbjct: 3   MLKTTLAVLTAAAALGAVSNAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIVGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS ++D+LSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFAG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++KK G+SS  +L GA+IC+QAGTTTEL ++D+F+A+N+KY PI F+  +
Sbjct: 123 VTYYDGVGFLVNKKLGVSSAKELDGATICIQAGTTTELNVSDFFRANNLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +  + RCD  T D S L+A +     P+++V+LP+ ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLESGRCDVLTSDKSQLFAQRSKLAAPTDYVVLPETISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE GIT KN+   +K T NPDV R LG       G+ L L KDW  +I+
Sbjct: 243 VKWTLFAMLNAEEAGITSKNVEAEAKATKNPDVARLLG--GDGEYGKDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+F++NLG  ++LKI RG NALW+ GG+ YAPP+R
Sbjct: 301 KQVGNYGEVFEKNLGQSTDLKIDRGMNALWNNGGIQYAPPVR 342


>gi|260768536|ref|ZP_05877470.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           furnissii CIP 102972]
 gi|260616566|gb|EEX41751.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           furnissii CIP 102972]
 gi|315180248|gb|ADT87162.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio furnissii NCTC 11218]
          Length = 342

 Score =  348 bits (894), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 169/342 (49%), Positives = 232/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFT-SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++         S S   S L  +  +GFL CG++TGL GF+   A G+W+G D
Sbjct: 4   KLTLLASVVAASTALMANSASAADSTLDKVLSQGFLTCGVSTGLPGFSNPNAKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDSALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  GISS  +L GAS+CVQ+GTTTEL LADYF+ + M Y P+VF+   
Sbjct: 124 VNYYDGQGFMVKKDLGISSAKELDGASVCVQSGTTTELNLADYFRNNGMSYKPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L  ++P   V+LP+IISK PL P + Q D +W+N+
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNV 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT +AMV AEE GIT KN +++ K + NP+V+R LG+D     G+ LG+  DW Y+I+
Sbjct: 244 AKWTLFAMVNAEEYGITSKNADEMLK-SDNPEVKRILGVD--GPKGKGLGIRDDWGYQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGKGSPLQISRGVNALWNAGGFMYAPPIR 342


>gi|325275056|ref|ZP_08141044.1| general amino acid ABC transporter, periplasmic binding protein
           [Pseudomonas sp. TJI-51]
 gi|324099819|gb|EGB97677.1| general amino acid ABC transporter, periplasmic binding protein
           [Pseudomonas sp. TJI-51]
          Length = 342

 Score =  348 bits (894), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 158/324 (48%), Positives = 227/324 (70%), Gaps = 2/324 (0%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           S +   + L  +KK+GF++CG++ GL GF+   A G   G D D CRA+++A+F D +K+
Sbjct: 21  SNAQAGATLDAVKKKGFVQCGVSDGLPGFSVPDAQGKIIGIDADVCRAVAAAVFGDANKV 80

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           ++  LNAKERF ALQS ++D+LSRNT WT  R+  +GL F  +TY+DG GF+++KK G+S
Sbjct: 81  KFSQLNAKERFTALQSGEVDVLSRNTTWTSSRDAGMGLVFTGVTYYDGVGFLVNKKLGVS 140

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S  +L GA+IC+QAGTTTEL ++D+F+A+ +KY PI F+  +E   +  + RCD  T D 
Sbjct: 141 SAKELDGATICIQAGTTTELNVSDFFRANGLKYTPITFDTSDESAKSLESGRCDVLTSDK 200

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           S L+A +     P+E+V+LP+ ISK PL P + +GD +W++IV WT +AM+ AEE GIT 
Sbjct: 201 SQLFAQRSKLAAPTEYVVLPETISKEPLGPVVRKGDEDWFSIVKWTLFAMLNAEEAGITS 260

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
           KN+   +K T NPDV R LG D     G+ L L KDW  +I++ +GNYGE+F++NLG  +
Sbjct: 261 KNVEAEAKATKNPDVARLLGAD--GEYGKDLKLPKDWVVQIVKQVGNYGEVFEKNLGQGT 318

Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342
           +LKI RG NALW+ GG+ YAPP+R
Sbjct: 319 DLKIDRGMNALWNNGGIQYAPPVR 342


>gi|254508781|ref|ZP_05120893.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus 16]
 gi|219548301|gb|EED25314.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus 16]
          Length = 342

 Score =  348 bits (894), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 232/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++     F  + ++ A S L  + K+GF+ CG++TGL GF+   + G+W+G D
Sbjct: 4   KLTLLASVVAASTAFMATSASAADSTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL++A+  D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQALAAAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+ S  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 124 VNYYDGQGFMVKKDLGLKSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    P+   +LP+IISK PL P + QGD +W+NI
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPASAQVLPEIISKEPLGPVVRQGDDQWFNI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AM+ AEE GI+ KN +++ K + +P+V+R LG+D     G+ LG+  DW Y++I
Sbjct: 244 AKWTLNAMINAEEYGISSKNADEMLK-SKDPNVKRILGVD--GPKGKGLGIRDDWGYQVI 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAPPIR 342


>gi|193071524|ref|ZP_03052434.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli E110019]
 gi|192955161|gb|EDV85654.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli E110019]
          Length = 341

 Score =  348 bits (894), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 157/343 (45%), Positives = 231/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +     G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GYYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|91212699|ref|YP_542685.1| putative periplasmic amino-acid ABC transporter binding protein
           [Escherichia coli UTI89]
 gi|117625557|ref|YP_858880.1| putative periplasmic amino-acid ABC transporter binding protein
           [Escherichia coli APEC O1]
 gi|215488575|ref|YP_002331006.1| predicted periplasmic binding transport protein;
           periplasmic-binding component of ABC superfamily
           [Escherichia coli O127:H6 str. E2348/69]
 gi|237705973|ref|ZP_04536454.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|306816388|ref|ZP_07450520.1| putative periplasmic binding transport protein; periplasmic-binding
           component of ABC superfamily [Escherichia coli NC101]
 gi|312968401|ref|ZP_07782610.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli 2362-75]
 gi|331649069|ref|ZP_08350157.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli M605]
 gi|331659557|ref|ZP_08360499.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli TA206]
 gi|91074273|gb|ABE09154.1| putative periplasmic amino-acid ABC transporter binding protein
           [Escherichia coli UTI89]
 gi|115514681|gb|ABJ02756.1| putative periplasmic amino-acid ABC transporter binding protein
           [Escherichia coli APEC O1]
 gi|215266647|emb|CAS11086.1| predicted periplasmic binding transport protein;
           periplasmic-binding component of ABC superfamily
           [Escherichia coli O127:H6 str. E2348/69]
 gi|222034984|emb|CAP77727.1| amino-acid ABC transporter-binding protein yhdW [Escherichia coli
           LF82]
 gi|226899013|gb|EEH85272.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|294494121|gb|ADE92877.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Escherichia coli IHE3034]
 gi|305849953|gb|EFM50412.1| putative periplasmic binding transport protein; periplasmic-binding
           component of ABC superfamily [Escherichia coli NC101]
 gi|307625131|gb|ADN69435.1| predicted periplasmic binding transport protein;
           periplasmic-binding component of ABC superfamily
           [Escherichia coli UM146]
 gi|312286619|gb|EFR14530.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli 2362-75]
 gi|312947826|gb|ADR28653.1| predicted periplasmic binding transport protein;
           periplasmic-binding component of ABC superfamily
           [Escherichia coli O83:H1 str. NRG 857C]
 gi|315289024|gb|EFU48422.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 110-3]
 gi|315300933|gb|EFU60153.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli MS 16-3]
 gi|320194754|gb|EFW69384.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Escherichia coli WV_060327]
 gi|323189120|gb|EFZ74404.1| general L-amino acid-binding periplasmic protein aapJ [Escherichia
           coli RN587/1]
 gi|323951212|gb|EGB47087.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H252]
 gi|323957584|gb|EGB53298.1| lysine-arginine-ornithine-binding periplasmic protein [Escherichia
           coli H263]
 gi|330909319|gb|EGH37833.1| glutamate Aspartate periplasmic binding protein precursor GltI
           [Escherichia coli AA86]
 gi|331042816|gb|EGI14958.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli M605]
 gi|331054139|gb|EGI26168.1| putative amino-acid ABC transporter-binding protein YhdW
           [Escherichia coli TA206]
          Length = 341

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 232/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W + I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAFNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|323498373|ref|ZP_08103373.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           sinaloensis DSM 21326]
 gi|323316615|gb|EGA69626.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           sinaloensis DSM 21326]
          Length = 342

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 233/342 (68%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++     F  + ++ A S L  + K+GFL CG++TGL GF+   + G+W+G D
Sbjct: 4   KLTLLASVVAASTAFMATSASAADSTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+ S ++L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 124 VNYYDGQGFMVKKDLGLKSATELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W+NI
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPSSAQVLPEIISKEPLGPVVRQGDDQWFNI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AM+ AEE GI+ KN +++ K + +P+++R LG+D     G+ LG+  DW Y++I
Sbjct: 244 AKWTLSAMINAEEYGISSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAPPIR 342


>gi|254439839|ref|ZP_05053333.1| lysine-arginine-ornithine-binding periplasmic protein
           [Octadecabacter antarcticus 307]
 gi|198255285|gb|EDY79599.1| lysine-arginine-ornithine-binding periplasmic protein
           [Octadecabacter antarcticus 307]
          Length = 338

 Score =  348 bits (893), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 153/342 (44%), Positives = 215/342 (62%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +    L I    + +  A  L D+K RG L CG+ TGLVGFA   ANG W+GFD
Sbjct: 1   MKNSVLLG--ALTIAGLAAGAAAAGTLDDVKARGTLNCGVTTGLVGFAAPDANGVWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRAL++A+  DP  ++++P   + RF AL S +ID L+RNT WT  R++ L   F  
Sbjct: 59  VGVCRALAAAVLGDPMAVEFVPTTGQTRFTALASGEIDFLARNTTWTFSRDVDLKFEFTG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y+DGQGF++ ++ G+SS   L GA++C+Q GTTTEL LADYF+++N+ Y P+  E   
Sbjct: 119 INYYDGQGFMVPRELGVSSAKDLDGATVCIQTGTTTELNLADYFRSNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T + P +HV+LP+IISK PL P +  GD EW ++
Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRATFENPGDHVLLPEIISKEPLGPLVRHGDNEWADV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  A++ AEELG+T  NI +++  T NP++ R LG +    +G  LGL  DW    I
Sbjct: 239 ARWTLNALIAAEELGVTSANIAELANGTDNPEINRLLGTE--GELGAMLGLEADWAKNAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F++N+G  + + + RG NA+W++GGL+Y+PP R
Sbjct: 297 MAGGNYGELFEKNIGENTPIGLARGLNAMWTEGGLIYSPPFR 338


>gi|37679741|ref|NP_934350.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio vulnificus YJ016]
 gi|37198486|dbj|BAC94321.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio vulnificus YJ016]
          Length = 375

 Score =  348 bits (893), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 230/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++       +S +    S L  + K+GFL CG++TGL GF+   + G+W+G D
Sbjct: 37  KLTILASLVAASTAMLSSNAFAAESTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 96

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+A+++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 97  VEYCQAIAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 156

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  GI S  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 157 VNYYDGQGFMVKKDLGIKSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 216

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    P+  V+LP+IISK PL P + QGD +W+NI
Sbjct: 217 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPNSAVVLPEIISKEPLGPVVRQGDDQWFNI 276

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AM+ AEE GIT KN  ++ K + +P+V+R LG+D     G+ LG+  DW Y+++
Sbjct: 277 AKWTLNAMINAEEYGITSKNAEEMLK-SNDPNVKRILGVD--GPKGKGLGIRDDWGYQVV 333

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 334 KQVGNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAPPIR 375


>gi|323492614|ref|ZP_08097758.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Vibrio brasiliensis LMG 20546]
 gi|323312989|gb|EGA66109.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Vibrio brasiliensis LMG 20546]
          Length = 342

 Score =  348 bits (893), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 167/342 (48%), Positives = 232/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFSTNA-SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++       ++ +  A S L  + K+GFL CG++TGL GF+   + G+W+G D
Sbjct: 4   KLTLLASVVAASTALMSTSAAAADSTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL+SA+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQALASAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G++S  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 124 VNYYDGQGFMVKKDLGLTSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W+NI
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPSSAQVLPEIISKEPLGPVVRQGDDQWFNI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AMV AEE GIT KN +++ K + +P+++R LG+D     G+ LG+  DW Y++I
Sbjct: 244 AKWTLAAMVNAEEYGITSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGEGSPLQISRGVNALWNAGGFMYAPPIR 342


>gi|303256337|ref|ZP_07342353.1| general amino acid ABC transporter, periplasmic binding protein
           [Burkholderiales bacterium 1_1_47]
 gi|302861066|gb|EFL84141.1| general amino acid ABC transporter, periplasmic binding protein
           [Burkholderiales bacterium 1_1_47]
          Length = 340

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 149/342 (43%), Positives = 227/342 (66%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +      L  + L   + +    +L  +K    + CG+NT   GF+   + G+W G D
Sbjct: 1   MNQTILAGALSAVSLSLAAPAFAGPVLDKVKANDVVVCGVNTAAPGFSNADSKGNWTGLD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRAL++A+  D +K++++PLN+ +RF ALQ+ ++D+L+RNT W L R+ SLG  F  
Sbjct: 61  VDYCRALAAAVLADANKVKFVPLNSPQRFSALQAGEVDVLARNTTWNLTRDASLGAVFVG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y+DGQGF++ KK  + S  QL+GA+ICVQ+GT++E ++ADYFK+H MKY  ++F+  E
Sbjct: 121 TNYYDGQGFLVPKKLNVKSAKQLNGATICVQSGTSSEPSVADYFKSHGMKYKAVLFDTTE 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A+ + RC  YT D+S L   +     P ++VILP++ISK PL P++ +GD EW+ I
Sbjct: 181 ATQGAFLSGRCQVYTTDMSDLAGARTKAANPDDYVILPEVISKEPLGPSVRRGDNEWFQI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             W   A + AEE GITQ N +++ K +T+P+V+R LG     ++G+ LGL KDW+YRI+
Sbjct: 241 ARWVLNAFIEAEEKGITQANADELRKTSTDPNVKRLLG--SGEDMGKLLGLDKDWSYRIV 298

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+RNLG ++ L +PRG N  W+ GG++YAPP+R
Sbjct: 299 KQVGNYGESFERNLGPKTPLALPRGINNQWTNGGILYAPPVR 340


>gi|302339786|ref|YP_003804992.1| extracellular solute-binding protein family 3 [Spirochaeta
           smaragdinae DSM 11293]
 gi|301636971|gb|ADK82398.1| extracellular solute-binding protein family 3 [Spirochaeta
           smaragdinae DSM 11293]
          Length = 365

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 156/354 (44%), Positives = 223/354 (62%), Gaps = 18/354 (5%)

Query: 5   FFVSILCLIILFFTSFSTNA----------------SILGDIKKRGFLKCGINTGLVGFA 48
            F+++   I L     S +                 S L  +K+RG +  G+  G+ G++
Sbjct: 14  LFLALFVTIALASCGSSKSEEPAAEESATAAPETGKSTLELVKERGKVIVGVTAGVPGYS 73

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
              + G W+GFDVD  RA+++A+  DP  I+  PL+AKERF ALQS +ID+L R T WT 
Sbjct: 74  APDSEGIWQGFDVDLGRAVAAAVLGDPDAIECRPLSAKERFTALQSGEIDVLVRVTTWTA 133

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+  LG+ F  + Y+DGQGF++ K  GI+S++ L GA++ VQ+GTTTEL L+DYF+ +N
Sbjct: 134 TRDSQLGVNFAGVNYYDGQGFMVAKDSGITSLADLDGATVAVQSGTTTELNLSDYFRKNN 193

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
           M +  I FE+ ++  AA  A R DA T D S LYAL+     P   ++LP++ISK PL P
Sbjct: 194 MDFELITFEKNDQASAALEAGRADAVTSDQSQLYALRTKFKEPENFIMLPELISKEPLGP 253

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288
            + QGD EW+NIV WT +AM+ AEE GIT  N++++ + + NP+V+R LG +    + E 
Sbjct: 254 VVRQGDDEWFNIVKWTLFAMLNAEEYGITSDNVDEMKETSDNPNVKRLLGSE--GGVWEG 311

Query: 289 LGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            GL  +  Y II+++GNYGE F+RNLG+ S L I RG NALW+KGG+ Y  PIR
Sbjct: 312 FGLESNAGYNIIKYIGNYGESFERNLGSGSPLNISRGLNALWTKGGIQYGMPIR 365


>gi|110807125|ref|YP_690645.1| putative periplasmic binding transport protein [Shigella flexneri 5
           str. 8401]
 gi|110616673|gb|ABF05340.1| putative periplasmic binding transport protein [Shigella flexneri 5
           str. 8401]
          Length = 341

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 231/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL  F+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPRFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|107103377|ref|ZP_01367295.1| hypothetical protein PaerPA_01004447 [Pseudomonas aeruginosa PACS2]
          Length = 338

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 157/342 (45%), Positives = 237/342 (69%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   +   +L  + L  ++ +   + L  +K++G+++CG++ GL GF+   A G +KG D
Sbjct: 1   MKGTWL--LLAAVCLGASATAEAGATLDAVKRKGYVQCGVSDGLPGFSYADAKGRFKGLD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRAL++A+F D  K+++ PL+A ERF ALQS  +D+LSRNT WT  R+ +LG+ F  
Sbjct: 59  VDICRALAAALFGDAEKVRFTPLSATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TYFDGQGF++++K G+SS  +L  A++C+Q+GTT EL +ADYF+AH ++Y  ++ +  E
Sbjct: 119 VTYFDGQGFLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYE 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A  A +CD  + D S LYA +L   +P ++V+LP++ISK PL PA+ QGD  W+NI
Sbjct: 179 KSARALEAGQCDVLSSDQSQLYAQRLKLAKPEQYVVLPEVISKEPLGPAVRQGDEAWFNI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT Y ++ AEELG+T  N+ + ++D+ NPDV R LG +   + G+ L L +DW  +++
Sbjct: 239 VRWTLYGLLNAEELGVTSSNVERQARDSRNPDVARLLGSE--GDAGKDLQLPRDWVVQMV 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL YAPPIR
Sbjct: 297 RQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 338


>gi|163760315|ref|ZP_02167398.1| ABC transporter, amino acid binding protein [Hoeflea phototrophica
           DFL-43]
 gi|162282714|gb|EDQ33002.1| ABC transporter, amino acid binding protein [Hoeflea phototrophica
           DFL-43]
          Length = 340

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 169/317 (53%), Positives = 238/317 (75%), Gaps = 3/317 (0%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L D+K +GF++CG++TGL GF+     G+W G DVD CR +++A+F D S +++ PL+A
Sbjct: 27  TLDDVKAKGFVQCGVSTGLAGFSAPNDAGEWSGIDVDLCRGVAAAVFGDASAVKFSPLSA 86

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
           KERF ALQS +ID+LSRNT WT+ R+  LGL F  + Y+DGQGF++ K  G++S  QLSG
Sbjct: 87  KERFTALQSGEIDVLSRNTTWTMSRDTQLGLNFAGVNYYDGQGFMVRKSLGVTSALQLSG 146

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           AS+CVQ GTTTEL L DYFKA++M Y+P+VFE++EE++AAY A+RCD YT D S LY+++
Sbjct: 147 ASVCVQTGTTTELNLTDYFKANDMTYNPVVFEKLEEVNAAYDANRCDVYTTDQSGLYSIR 206

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           L    P EH++LP++ISK PL P + QGD +W+NIV W H AM+ AEE+GIT  N+++++
Sbjct: 207 LGLSAPDEHMVLPEVISKEPLGPVVRQGDDQWFNIVKWVHNAMLNAEEMGITSANVDEMA 266

Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325
             + +P+V R LG +     GE +G++ DW Y++++ +GNYGE+F+RN+G  + L I RG
Sbjct: 267 A-SADPNVMRLLGKE--GTFGEGIGVSNDWAYQVVKQVGNYGEVFERNVGASTPLAIDRG 323

Query: 326 YNALWSKGGLMYAPPIR 342
            NALWSKGGL YAPPIR
Sbjct: 324 VNALWSKGGLQYAPPIR 340


>gi|17988694|ref|NP_541327.1| general L-amino acid-binding periplasmic protein AAPJ precursor
           [Brucella melitensis bv. 1 str. 16M]
 gi|17984503|gb|AAL53591.1| general l-amino acid-binding periplasmic protein aapj precursor
           [Brucella melitensis bv. 1 str. 16M]
          Length = 331

 Score =  348 bits (892), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 164/334 (49%), Positives = 223/334 (66%), Gaps = 3/334 (0%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +L             A  L  +K+RG + CG++ G+ GF+     G W GFD+DFCRA+S
Sbjct: 1   MLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFDIDFCRAVS 60

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
           +A+F DP K+ ++PL+ KERF ALQS  +D+LSR T WTL R+  +G+ F    Y+DGQG
Sbjct: 61  AAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVGTAYYDGQG 120

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
           F++ K  G+ S  +L GASIC + GTTTE  +ADYF AHN+KY P+V +  + I  A+  
Sbjct: 121 FMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSADGILKAFET 180

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            RCD YT D SALYA +L    P  +++LP++ISK PL PA+ QGD +W+NIV WT +A+
Sbjct: 181 GRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNIVRWTLFAL 240

Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308
           + AEELGITQK +     D+  PD++RFLG +   + G+ LGL   W Y I+  +GNYGE
Sbjct: 241 LEAEELGITQKTV-AADLDSRKPDIRRFLGSE--GDNGQQLGLEPKWAYNIVASVGNYGE 297

Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           MF+R +G  S LKI RG NALW+KGGLMYAPP++
Sbjct: 298 MFERTIGEGSLLKINRGINALWNKGGLMYAPPVK 331


>gi|254504317|ref|ZP_05116468.1| hypothetical protein SADFL11_4356 [Labrenzia alexandrii DFL-11]
 gi|222440388|gb|EEE47067.1| hypothetical protein SADFL11_4356 [Labrenzia alexandrii DFL-11]
          Length = 338

 Score =  348 bits (892), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 156/340 (45%), Positives = 228/340 (67%), Gaps = 3/340 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K+ F S+         +F  +AS L  +K+ G+  CG++ G  GF+   ++G+W G DVD
Sbjct: 2   KNTFKSLAVAAAFSGAAFPASASTLERVKENGYFTCGVSQGNPGFSNPDSDGNWSGLDVD 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
           +CRA+++A+  DP+ +++ PL++ ERF ALQS +ID+LSR T WT+ R+ +LG  F  + 
Sbjct: 62  YCRAIAAAVLGDPAAVKFRPLSSPERFTALQSGEIDVLSRTTTWTMSRDTNLGANFAGVM 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+DGQ  ++ K+ GI+S  +L+GAS+C   GTTTEL +AD+F+ +NM+Y  + FE+ +E+
Sbjct: 122 YYDGQAMMVRKELGITSAMELAGASVCTATGTTTELNVADFFRVNNMEYEVVAFEKNDEV 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             AY A RCD YT D S L+A +L    PSEH+ILP++ISK PL P + QGD +W NI  
Sbjct: 182 TQAYDAGRCDVYTTDKSGLHANRLKLTNPSEHMILPEVISKEPLGPVVRQGDDQWLNIAK 241

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           WT   ++ AEELG+TQ N+  + + + NP V+R +G++   N G ALGL +DW  RII  
Sbjct: 242 WTLNVLINAEELGVTQANVADM-ESSDNPAVKRLIGVE--GNFGGALGLDQDWAVRIISA 298

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGE+F RN+G  + L I RG NA W  GG +YAPP+R
Sbjct: 299 VGNYGEIFVRNVGVDTPLGIERGLNASWIDGGTLYAPPVR 338


>gi|126461167|ref|YP_001042281.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rhodobacter sphaeroides ATCC 17029]
 gi|126102831|gb|ABN75509.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rhodobacter sphaeroides ATCC 17029]
          Length = 338

 Score =  348 bits (892), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 149/342 (43%), Positives = 219/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L +    +   +A+ L D+K RG L CG++TGL GF+   ANG+W GFD
Sbjct: 1   MTKSVFLG--TLTVAGLAAGLASAATLDDVKARGELNCGVSTGLTGFSLPDANGNWTGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D +K++++P   + RF AL S ++D+L+RN+ WT  R+  L L F  
Sbjct: 59  VSLCRAVAAAVLGDGTKVKFVPTTGQTRFTALASGEVDMLARNSTWTFSRDTDLKLDFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G++S  +L GA++C+Q GTTTEL LAD+FK +N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVRKDLGVTSAKELDGATVCIQTGTTTELNLADWFKVNNLSYTPVAVETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E +  Y A  CDAYT D S L A +     P  H+ILP+IISK PL PA+  GD EW +I
Sbjct: 179 EGEQQYAAGACDAYTTDASGLAATRAAFADPENHIILPEIISKEPLGPAVRHGDNEWADI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A++ AEE G+T  N+ +++ ++ NP++QR LG+    ++G+ + L  DW  R I
Sbjct: 239 VRWTLNALIAAEEYGVTSANMEELAANSPNPEIQRVLGV--QGDLGKMIRLDNDWAKRAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F   +G  + + + RG NA W++GGL+YAPP R
Sbjct: 297 AVGGNYGEIFAATIGEATPIGLARGLNAQWTQGGLLYAPPFR 338


>gi|15599053|ref|NP_252547.1| amino acid-binding protein [Pseudomonas aeruginosa PAO1]
 gi|218889858|ref|YP_002438722.1| putative amino acid-binding protein [Pseudomonas aeruginosa LESB58]
 gi|254236763|ref|ZP_04930086.1| hypothetical protein PACG_02773 [Pseudomonas aeruginosa C3719]
 gi|254242550|ref|ZP_04935872.1| hypothetical protein PA2G_03302 [Pseudomonas aeruginosa 2192]
 gi|9950036|gb|AAG07245.1|AE004803_1 probable amino acid-binding protein [Pseudomonas aeruginosa PAO1]
 gi|126168694|gb|EAZ54205.1| hypothetical protein PACG_02773 [Pseudomonas aeruginosa C3719]
 gi|126195928|gb|EAZ59991.1| hypothetical protein PA2G_03302 [Pseudomonas aeruginosa 2192]
 gi|218770081|emb|CAW25843.1| probable amino acid-binding protein [Pseudomonas aeruginosa LESB58]
          Length = 341

 Score =  348 bits (892), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 157/342 (45%), Positives = 237/342 (69%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   +   +L  + L  ++ +   + L  +K++G+++CG++ GL GF+   A G +KG D
Sbjct: 4   MKGTWL--LLAAVCLGASATAEAGATLDAVKRKGYVQCGVSDGLPGFSYADAKGRFKGLD 61

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRAL++A+F D  K+++ PL+A ERF ALQS  +D+LSRNT WT  R+ +LG+ F  
Sbjct: 62  VDICRALAAALFGDAEKVRFTPLSATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTG 121

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TYFDGQGF++++K G+SS  +L  A++C+Q+GTT EL +ADYF+AH ++Y  ++ +  E
Sbjct: 122 VTYFDGQGFLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYE 181

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A  A +CD  + D S LYA +L   +P ++V+LP++ISK PL PA+ QGD  W+NI
Sbjct: 182 KSARALEAGQCDVLSSDQSQLYAQRLKLAKPEQYVVLPEVISKEPLGPAVRQGDEAWFNI 241

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT Y ++ AEELG+T  N+ + ++D+ NPDV R LG +   + G+ L L +DW  +++
Sbjct: 242 VRWTLYGLLNAEELGVTSSNVERQARDSRNPDVARLLGSE--GDAGKDLQLPRDWVVQMV 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL YAPPIR
Sbjct: 300 RQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 341


>gi|27365994|ref|NP_761522.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Vibrio vulnificus CMCP6]
 gi|320156509|ref|YP_004188888.1| glutamate aspartate periplasmic binding protein GltI [Vibrio
           vulnificus MO6-24/O]
 gi|27362194|gb|AAO11049.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio vulnificus CMCP6]
 gi|319931821|gb|ADV86685.1| glutamate Aspartate periplasmic binding protein precursor GltI
           [Vibrio vulnificus MO6-24/O]
          Length = 342

 Score =  348 bits (892), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 230/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++       +S +    S L  + K+GFL CG++TGL GF+   + G+W+G D
Sbjct: 4   KLTILASLVAASTAMLSSNAFAAESTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+A+++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQAIAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  GI S  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 124 VNYYDGQGFMVKKDLGIKSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    P+  V+LP+IISK PL P + QGD +W+NI
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPNSAVVLPEIISKEPLGPVVRQGDDQWFNI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AM+ AEE GIT KN  ++ K + +P+V+R LG+D     G+ LG+  DW Y+++
Sbjct: 244 AKWTLNAMINAEEYGITSKNAEEMLK-SNDPNVKRILGVD--GPKGKGLGIRDDWGYQVV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAPPIR 342


>gi|313109278|ref|ZP_07795246.1| Putative amino-acid ABC transporter binding protein [Pseudomonas
           aeruginosa 39016]
 gi|310881748|gb|EFQ40342.1| Putative amino-acid ABC transporter binding protein [Pseudomonas
           aeruginosa 39016]
          Length = 341

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 157/342 (45%), Positives = 237/342 (69%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   +   +L  + L  ++ +   + L  +K++G+++CG++ GL GF+   A G +KG D
Sbjct: 4   MKGTWL--LLAAVCLGASATAEAGATLDAVKRKGYVQCGVSDGLPGFSYADAKGRFKGLD 61

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRAL++A+F D  K+++ PL+A ERF ALQS  +D+LSRNT WT  R+ +LG+ F  
Sbjct: 62  VDICRALAAALFGDAEKVRFTPLSATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTG 121

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TYFDGQGF++++K G+SS  +L  A++C+Q+GTT EL +ADYF+AH ++Y  ++ +  E
Sbjct: 122 VTYFDGQGFLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYE 181

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A  A +CD  + D S LYA +L   +P ++V+LP++ISK PL PA+ QGD  W+NI
Sbjct: 182 KSARALEAGQCDVLSSDQSQLYAQRLKLAKPDQYVVLPEVISKEPLGPAVRQGDEAWFNI 241

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT Y ++ AEELG+T  N+ + ++D+ NPDV R LG +   + G+ L L +DW  +++
Sbjct: 242 VRWTLYGLLNAEELGVTSSNVERQARDSRNPDVARLLGSE--GDAGKDLQLPRDWVVQMV 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL YAPPIR
Sbjct: 300 RQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 341


>gi|163859070|ref|YP_001633368.1| putative extracellular solute-binding protein [Bordetella petrii
           DSM 12804]
 gi|163262798|emb|CAP45101.1| putative extracellular solute-binding protein [Bordetella petrii]
          Length = 338

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 152/343 (44%), Positives = 226/343 (65%), Gaps = 6/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      S++   +L        A+ L  ++KRG L+CG  TG  GF+   A G W+G D
Sbjct: 1   MK--IARSLIGATLLLGAMAGAQAATLDVVQKRGELRCGTTTGFAGFSAPDAQGVWRGLD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A+F D +KI+ +PLN+++RF ALQS +ID+L+RNT  T  R+ +LG+    
Sbjct: 59  VDLCRAVAAAVFGDANKIKIVPLNSQQRFTALQSGEIDVLTRNTTVTQQRDTALGIIHAG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I ++DGQGF++ K  G+ S ++L+GA+IC+Q GT+ E TLAD+ +AHN+ Y P+V E   
Sbjct: 119 INFYDGQGFLVPKSLGVQSATELNGATICLQTGTSNENTLADWARAHNVSYKPVVIETFN 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E+  A+ + RCD ++ D S L +++      P ++++LP+IISK PL P + QGD  W N
Sbjct: 179 EVVNAFASGRCDVFSTDASGLASIRISKLQNPDDYLVLPEIISKEPLGPFVRQGDDAWLN 238

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           +V W+  AM+ AEE GIT  N++Q  + + NP+++R LG+  +   G  +GL + W Y I
Sbjct: 239 VVHWSLSAMIEAEEYGITSANVDQQLQ-SANPNIRRMLGV--TPGAGANMGLDEKWAYNI 295

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNYGE F+RN+G  S LKI RG NA W++GGLMYA PIR
Sbjct: 296 IKQVGNYGESFERNVGAGSPLKIKRGLNAQWTQGGLMYALPIR 338


>gi|116051889|ref|YP_789268.1| putative amino acid-binding protein [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|115587110|gb|ABJ13125.1| Putative amino-acid ABC transporter binding protei [Pseudomonas
           aeruginosa UCBPP-PA14]
          Length = 341

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 157/342 (45%), Positives = 236/342 (69%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   +   +L  + L  ++ +   + L  +K++G+++CG++ GL GF+   A G +KG D
Sbjct: 4   MKGTWL--LLAAVCLGASATAEAGATLDAVKRKGYVQCGVSDGLPGFSYADAKGRFKGLD 61

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRAL++A+F D  K+++ PL A ERF ALQS  +D+LSRNT WT  R+ +LG+ F  
Sbjct: 62  VDICRALAAALFGDAEKVRFTPLPATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTG 121

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TYFDGQGF++++K G+SS  +L  A++C+Q+GTT EL +ADYF+AH ++Y  ++ +  E
Sbjct: 122 VTYFDGQGFLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYE 181

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A  A +CD  + D S LYA +L   +P ++V+LP++ISK PL PA+ QGD  W+NI
Sbjct: 182 KSARALEAGQCDVLSSDQSQLYAQRLKLAKPDQYVVLPEVISKEPLGPAVRQGDEAWFNI 241

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT Y ++ AEELG+T  N+ + ++D+ NPDV R LG +   + G+ L L +DW  +++
Sbjct: 242 VRWTLYGLLNAEELGVTSSNVERQARDSRNPDVARLLGSE--GDAGKDLQLPRDWVVQMV 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL YAPPIR
Sbjct: 300 RQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 341


>gi|307300514|ref|ZP_07580294.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
 gi|307318379|ref|ZP_07597814.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
 gi|306896061|gb|EFN26812.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti AK83]
 gi|306904680|gb|EFN35264.1| extracellular solute-binding protein family 3 [Sinorhizobium
           meliloti BL225C]
          Length = 336

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 155/342 (45%), Positives = 229/342 (66%), Gaps = 6/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M            +   T+ +     L  +K+RG L+CG++ G++GF+     G+W GFD
Sbjct: 1   MKTGILALFATAFLAGTTAQAA---TLDVVKQRGELRCGVSQGVLGFSAPDDKGEWSGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +DFCRA+++A    P K++Y+PL+ KERF ALQS ++D+LSR T WTL R+  LG++F  
Sbjct: 58  IDFCRAVAAATLGSPDKVKYVPLSTKERFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVG 117

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQ F++    G+ SV +LSGAS+C + GTTTE  +ADYF A+ ++Y  I FE+ +
Sbjct: 118 VNYYDGQAFMVRGDIGVKSVKELSGASVCTETGTTTEQNMADYFSANKIEYQVIAFEKAD 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A+ + RCD Y+ D SALY+ +LT + P   V+LP++ISK PL PA+ QGD +W+ +
Sbjct: 178 QTIQAFNSGRCDVYSTDASALYSQRLTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKV 237

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEELGIT++N   + +  T    +RFLGID  +  G+ALGL   W Y+ +
Sbjct: 238 VRWTLFAMIEAEELGITRENAASLLESGTAAQ-KRFLGIDNEA--GKALGLDPKWAYQTV 294

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGE+F+R+LG +S L+I RG N LW+ GGL+YAPP+R
Sbjct: 295 AAVGNYGEIFERHLGKESALRIDRGLNKLWNNGGLIYAPPVR 336


>gi|238752136|ref|ZP_04613618.1| Extracellular solute-binding protein, family 3 [Yersinia rohdei
           ATCC 43380]
 gi|238709609|gb|EEQ01845.1| Extracellular solute-binding protein, family 3 [Yersinia rohdei
           ATCC 43380]
          Length = 341

 Score =  347 bits (890), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 159/343 (46%), Positives = 230/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    L   +   +A   L  +KK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA+++AIF D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G+ F 
Sbjct: 61  DVDICRAVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P+E ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPTEFIVLPEVISKEPLGPVVRRGDEDWFA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           +V WT +AM+ AEE+G+T +N+  ++   T PD+   LG +   N G+ L +  DW  +I
Sbjct: 241 LVRWTLFAMLNAEEMGVTSQNVEALAAKPTTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE F+RN+G  SELKI RG NALW+ GGL YAPP+R
Sbjct: 299 VKQVGNYGESFERNVGMGSELKIKRGQNALWNNGGLQYAPPVR 341


>gi|153835228|ref|ZP_01987895.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           harveyi HY01]
 gi|148868294|gb|EDL67426.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           harveyi HY01]
          Length = 342

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 231/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++        + +  A   L  + K+GF+ CG++TGL GF+   + G+W+G D
Sbjct: 4   KLTVLASVVAASTAMMATSAQAADTTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 124 VNYYDGQGFMVKKDLGVSSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W+NI
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLKDPSSATVLPEIISKEPLGPVVRQGDDQWFNI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT +AMV AEE GI+ KN +++ K + +P+++R LG+D     G+ LG+  DW Y++I
Sbjct: 244 AKWTLFAMVNAEEYGISSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S LKI RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGTGSPLKISRGVNALWNAGGFMYAPPIR 342


>gi|89901102|ref|YP_523573.1| extracellular solute-binding protein [Rhodoferax ferrireducens
           T118]
 gi|89345839|gb|ABD70042.1| extracellular solute-binding protein, family 3 [Rhodoferax
           ferrireducens T118]
          Length = 344

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 160/342 (46%), Positives = 219/342 (64%), Gaps = 3/342 (0%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
                 +++  +  F ++ +     L  IK RG + CG+NTGL GF    + G W G DV
Sbjct: 5   KLQTLTAVVATVGAFMSAPAHAGKTLDGIKARGQVVCGVNTGLAGFGAADSAGKWTGLDV 64

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           D CRA+++A   D  KI+Y+PLNA++RF ALQS ++D+LSRNT +TL R+ SLGL    +
Sbjct: 65  DVCRAIAAATLGDAEKIKYVPLNAQQRFTALQSGEVDVLSRNTTFTLTRDASLGLHDTAV 124

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
           TY+DGQGF++  K  I S  QL G ++CVQ+GTTTE  L DY KA+ +   P+VFE++E 
Sbjct: 125 TYYDGQGFMVPVKSKIKSAKQLKGQTVCVQSGTTTEKNLTDYSKANGLNIKPVVFEKLEA 184

Query: 182 IDAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
            + AY   RC AYT D S L + +      P EH+ILP++ISK PL P + +GD EW+ I
Sbjct: 185 AENAYFTGRCIAYTTDASGLASTRNKVAKDPKEHIILPELISKEPLGPMVRRGDDEWFAI 244

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W  Y ++ AEE GITQ N+  +   + +P VQR LG   S + G+ LGL+KDW    I
Sbjct: 245 VKWVIYGLLEAEEYGITQANLEGLKATSKDPVVQRILGT--SEDSGKLLGLSKDWMANAI 302

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +  GNYGE+F+RN+G  S L +PRG N  W+KGGLMYA P+R
Sbjct: 303 KATGNYGEIFERNVGPNSPLGLPRGVNNQWNKGGLMYAYPVR 344


>gi|330862829|emb|CBX72970.1| putative amino-acid ABC transporter-binding protein yhdW [Yersinia
           enterocolitica W22703]
          Length = 341

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 161/343 (46%), Positives = 229/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    L   +   +A   L  +KK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++AIF D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G+ F 
Sbjct: 61  DVDICRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P E ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+T KN+ +++   T PD+   LG +   N G+ L +  DW  +I
Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEELAAKPTTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE FDRN+G  SELKI RG NALW+ GGL YAPP+R
Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNNGGLQYAPPVR 341


>gi|254451978|ref|ZP_05065415.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Octadecabacter
           antarcticus 238]
 gi|198266384|gb|EDY90654.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Octadecabacter
           antarcticus 238]
          Length = 338

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 154/342 (45%), Positives = 213/342 (62%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +    L I    + +  A  L D+K RG L CG+ TGLVGFA   ANG W+GFD
Sbjct: 1   MKNSVLLG--ALTIAGLAAGAAAAGTLDDVKARGTLNCGVTTGLVGFAAPDANGVWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRAL++A+  DP  ++++P   + RF AL S +ID L+RNT WT  R++ L   F  
Sbjct: 59  VGLCRALAAAVLGDPMAVEFVPTTGQTRFTALASGEIDFLARNTTWTFSRDVDLKFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y+DGQGF++ +  G+SS   L GA++C+Q GTTTEL LADYF+++N+ Y P+  E   
Sbjct: 119 INYYDGQGFMVPRALGVSSAKDLDGATVCIQTGTTTELNLADYFRSNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T + P +HV+LP+IISK PL P +  GD EW ++
Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRATFENPGDHVLLPEIISKEPLGPLVRHGDNEWADV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  A++ AEELG+T  NI +++  T NP++ R LG +    +G  LGL  DW  + I
Sbjct: 239 ARWTLNALIAAEELGVTSANIAEMASGTDNPEINRLLGSE--GELGAMLGLESDWAMKAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F++N+G  + + + RG NALW+ GGL+Y PP R
Sbjct: 297 MAGGNYGELFEKNIGENTPIGLARGLNALWTDGGLVYTPPFR 338


>gi|262394189|ref|YP_003286043.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           Ex25]
 gi|262337783|gb|ACY51578.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           Ex25]
          Length = 342

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 230/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++        + +  A   L  + K+GFL CG++TGL GF+   + G+W+G D
Sbjct: 4   KLTVLASVVAASTAMMATSAQAADTTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  GISS  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 124 VNYYDGQGFMVKKDLGISSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W+NI
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQWFNI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AM+ AEE GI+ KN +++ K + +P+++R LG+D     G+ LG+  DW Y++I
Sbjct: 244 AKWTLSAMINAEEYGISSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGTGSPLEISRGVNALWNAGGFMYAPPIR 342


>gi|261252934|ref|ZP_05945507.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           orientalis CIP 102891]
 gi|260936325|gb|EEX92314.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           orientalis CIP 102891]
          Length = 342

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 166/342 (48%), Positives = 231/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCL-IILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++     L  TS S   S L  + K+GF+ CG++TGL GF+   + G+W+G D
Sbjct: 4   KLTLLASVVAASTALMSTSASAADSTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+ L++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQGLAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G++S  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 124 VNYYDGQGFMVKKDLGLTSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W+NI
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPSSAQVLPEIISKEPLGPVVRQGDDQWFNI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AMV AEE GI+ KN +++ K + +P+++R LG+D     G+ LG+  DW Y++I
Sbjct: 244 AKWTLAAMVNAEEYGISSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGEGSPLQISRGVNALWNAGGFMYAPPIR 342


>gi|118589034|ref|ZP_01546441.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Stappia aggregata IAM 12614]
 gi|118438363|gb|EAV44997.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Stappia aggregata IAM 12614]
          Length = 326

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 165/316 (52%), Positives = 229/316 (72%), Gaps = 3/316 (0%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L D+K +GF++CG++ GL GF+   A G+W G DVD+CRA+++A+F D S ++Y PL+AK
Sbjct: 14  LEDVKAKGFIQCGVSQGLPGFSNPDAQGNWTGIDVDYCRAMAAAVFGDASAVKYTPLSAK 73

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
           ERF ALQS ++D+LSRNT WT+ R+  LGL F  + Y+DGQGF++ K  G++S  +LSGA
Sbjct: 74  ERFTALQSGEVDVLSRNTTWTMSRDTQLGLNFAGVNYYDGQGFMVRKDLGVTSALELSGA 133

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           S+C   GTTTEL +ADYF+A+NM Y  + FE+ +E+ AAY A RCD YT D S LYA +L
Sbjct: 134 SVCTNTGTTTELNVADYFRANNMPYEIVAFEKADEVVAAYDAGRCDVYTTDASGLYAQRL 193

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
               P +H++LP+IISK PL P + QGD EW+NI  WT  AM+ AEELG+T +N++++ K
Sbjct: 194 KLTNPGDHMVLPEIISKEPLGPVVRQGDDEWFNIAKWTLNAMLNAEELGVTSENVDEM-K 252

Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326
            + NP ++R LG++     GEA+GL  DW Y II+++GNY E F+ N+G  + L I RG 
Sbjct: 253 SSDNPSIKRLLGVE--GAFGEAIGLPNDWAYAIIKNVGNYEESFNANVGPDTPLGISRGV 310

Query: 327 NALWSKGGLMYAPPIR 342
           NALW+ GG MYAPP+R
Sbjct: 311 NALWNDGGFMYAPPVR 326


>gi|156974643|ref|YP_001445550.1| hypothetical protein VIBHAR_02361 [Vibrio harveyi ATCC BAA-1116]
 gi|156526237|gb|ABU71323.1| hypothetical protein VIBHAR_02361 [Vibrio harveyi ATCC BAA-1116]
          Length = 350

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 231/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++        + +  A   L  + K+GF+ CG++TGL GF+   + G+W+G D
Sbjct: 12  KLTVLASVVAASTAMMATSAQAADTTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGID 71

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 72  VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 131

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 132 VNYYDGQGFMVKKDLGVSSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAA 191

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W+NI
Sbjct: 192 QTSKGFDAGRCDILTTDQSGLYALRLNLKDPSSATVLPEIISKEPLGPVVRQGDDQWFNI 251

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT +AMV AEE GI+ KN +++ K + +P+++R LG+D     G+ LG+  DW Y++I
Sbjct: 252 AKWTLFAMVNAEEYGISSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 308

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S LKI RG NALW+ GG MYAPPIR
Sbjct: 309 KQVGNYGESFERTVGTGSPLKISRGVNALWNAGGFMYAPPIR 350


>gi|75906963|ref|YP_321259.1| extracellular solute-binding protein [Anabaena variabilis ATCC
           29413]
 gi|75700688|gb|ABA20364.1| L-glutamate-binding protein / L-aspartate-binding protein / neutral
           amino acid-binding protein [Anabaena variabilis ATCC
           29413]
          Length = 356

 Score =  346 bits (888), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 157/357 (43%), Positives = 224/357 (62%), Gaps = 18/357 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILG---------------DIKKRGFLKCGINTGLV 45
           M K   +    LI         +A                    IK RG L CG++  + 
Sbjct: 3   MNKLVIILGASLIFTTTACGGDSAPTTDASTNSGGTLVANRWNTIKNRGQLICGVSGEVP 62

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
           GF+ V  NG++ G DVD CRA+++A+FD+P  +++  L+AKERF ALQ+ ++DILSRNT 
Sbjct: 63  GFSFVGTNGEYSGIDVDVCRAIAAALFDNPDAVEFRNLSAKERFTALQTGEVDILSRNTT 122

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
           WTL R  S+GL F P+ ++DGQ  ++ K   I S++ L   +ICVQ GTTTE  LAD  +
Sbjct: 123 WTLSRATSVGLEFAPVVFYDGQAIMVRKNSAIKSLADLKDKAICVQTGTTTEQNLADQMR 182

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
             N+ Y P+VFE V    A Y   RCDA T D SAL + + T  +P ++V+L ++IS  P
Sbjct: 183 KRNITYKPVVFEDVNVTFATYAEGRCDAITADRSALVSRRTTLPKPEDNVVLDEVISSEP 242

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285
           LAPA+ +GD +W + V+W  YA++  EELGI  +N+ Q    + +PDV+RFLG +   ++
Sbjct: 243 LAPAVAKGDAKWSDTVNWVVYALIKGEELGINSQNLGQF-TTSNDPDVKRFLGTE--GDL 299

Query: 286 GEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           G+ LGLT D+  RII+H+GNYGE++DRNLG +++L + RG N LWSKGGL+Y+PP R
Sbjct: 300 GQGLGLTNDFAARIIKHVGNYGELYDRNLGPKTKLNLARGQNQLWSKGGLLYSPPFR 356


>gi|332163168|ref|YP_004299745.1| ABC transporter periplasmic solute-binding protein [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318603946|emb|CBY25444.1| glutamate Aspartate periplasmic binding protein precursor GltI
           [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325667398|gb|ADZ44042.1| ABC transporter periplasmic solute-binding protein [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
          Length = 341

 Score =  346 bits (888), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 161/343 (46%), Positives = 229/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    L   +   +A   L  +KK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++AIF D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G+ F 
Sbjct: 61  DVDICRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P E ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+T KN+ +++   T PD+   LG +   N G+ L +  DW  +I
Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEELAAKPTTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE FDRN+G  SELKI RG NALW+ GGL YAPP+R
Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNNGGLQYAPPVR 341


>gi|67922406|ref|ZP_00515917.1| extracellular solute-binding protein, family 3 [Crocosphaera
           watsonii WH 8501]
 gi|67855750|gb|EAM50998.1| extracellular solute-binding protein, family 3 [Crocosphaera
           watsonii WH 8501]
          Length = 350

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 142/355 (40%), Positives = 225/355 (63%), Gaps = 18/355 (5%)

Query: 1   MY-KDFFVSILCLIILFFTSFSTNASI-----------LGDIKKRGFLKCGINTGLVGFA 48
           M+ K +F+ I  L+ +  T+    +             L  IK+RG L CG+N  + GF+
Sbjct: 1   MFNKPYFILIALLLTMPLTACGGGSQTSDNPTPTSSSRLDTIKQRGTLICGVNGEVPGFS 60

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            V  NG + G DVD CRA+++A+FDDP K++Y  L+A+ERF A+QS ++D+L+RNT WT+
Sbjct: 61  FVDENGQYSGLDVDVCRAIAAALFDDPEKVEYRKLSAQERFPAVQSGEVDVLNRNTTWTI 120

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+ + G+ F P  ++DGQG ++    G++ +  L+G SICV AGTTTE  LAD  +   
Sbjct: 121 SRDTTNGMEFAPTIFYDGQGIMVTTASGVTDIQGLAGKSICVLAGTTTEQNLADQMRKKG 180

Query: 169 M-KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
           +  Y+P+ F+ V+ + AAY+  RC+  T D S L A +      ++H IL  ++SK PL 
Sbjct: 181 ITDYNPVTFDDVDALYAAYQQGRCEGVTADRSQLVARRSILPNSNDHNILNVVLSKEPLG 240

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGE 287
           PA+   D++W++ V W  ++++ AEE GI  +N+    K + +P+++RFLG+D    +GE
Sbjct: 241 PAVKNNDSDWFDAVKWITFSLIQAEEFGINSENLATFEK-SEDPNIRRFLGLDD--KLGE 297

Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            +GL  D+  R+++H+GNYGE++DRN+G    L + RG N LW++GGL+Y+PP R
Sbjct: 298 GIGLPNDFASRVVKHVGNYGEVYDRNIGK--PLGLERGPNQLWTEGGLLYSPPFR 350


>gi|269968795|ref|ZP_06182784.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio alginolyticus 40B]
 gi|269826607|gb|EEZ80952.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio alginolyticus 40B]
          Length = 350

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 166/342 (48%), Positives = 232/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++        + +  A   L  + K+GFL CG++TGL GF+   + G+W+G D
Sbjct: 12  KLTVLASVVAASTAMMATSAQAADTTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 71

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 72  VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 131

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ GISS  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 132 VNYYDGQGFMVKKELGISSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAA 191

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W+NI
Sbjct: 192 QTSKGFDAGRCDVLTTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQWFNI 251

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AM+ AEE GI+ KN +++ K +T+P+++R LG+D     G+ LG+  DW Y++I
Sbjct: 252 AKWTLSAMINAEEYGISSKNADEMLK-STDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 308

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 309 KQVGNYGESFERTVGTGSPLEISRGVNALWNAGGFMYAPPIR 350


>gi|91227965|ref|ZP_01262075.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio alginolyticus 12G01]
 gi|91188286|gb|EAS74584.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio alginolyticus 12G01]
          Length = 342

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 166/342 (48%), Positives = 232/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++        + +  A   L  + K+GFL CG++TGL GF+   + G+W+G D
Sbjct: 4   KLTVLASVVAASTAMMATSAQAADTTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ GISS  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 124 VNYYDGQGFMVKKELGISSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W+NI
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQWFNI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AM+ AEE GI+ KN +++ K +T+P+++R LG+D     G+ LG+  DW Y++I
Sbjct: 244 AKWTLSAMINAEEYGISSKNADEMLK-STDPNIKRILGVD--GPKGKGLGIRDDWGYQVI 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGTGSPLEISRGVNALWNAGGFMYAPPIR 342


>gi|317401305|gb|EFV81945.1| amino acid-binding periplasmic protein [Achromobacter xylosoxidans
           C54]
          Length = 338

 Score =  346 bits (887), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 147/340 (43%), Positives = 226/340 (66%), Gaps = 4/340 (1%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
           +    ++   +L   +    A+ L  +++RG + CG  TG  GF+   A G W+G DVD 
Sbjct: 2   NIAKGLVGAALLLAVAQGAQAATLDVVRQRGAVACGTTTGFAGFSAPDAQGKWQGLDVDL 61

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
           CRA+++A+F D +KI+ +PLN+++RF ALQS ++D+L+RNT  T  R+ +LG+    I +
Sbjct: 62  CRAIAAAVFGDANKIKVVPLNSQQRFTALQSGEVDVLTRNTTVTQQRDTALGIIHAGINF 121

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           +DGQGF++ K  G+ S  +++GA+IC+Q GT+ E TLAD+ +A+N+ Y P+V E   E+ 
Sbjct: 122 YDGQGFLVPKSLGVKSAKEINGATICLQTGTSNENTLADWARANNVTYKPVVIETFNEVV 181

Query: 184 AAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
            A+ A RCD ++ D S L +++      P ++V+LP+IISK PL P + QGD  W NIV 
Sbjct: 182 NAFAAGRCDVFSTDASGLASIRISKLQNPDDYVVLPEIISKEPLGPFVRQGDDAWLNIVR 241

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           W+  AM+ AEE G+T +N+++ +K ++NP+++R LG+      G  LGL + W Y I++ 
Sbjct: 242 WSLSAMIEAEEYGVTSRNVDEQAK-SSNPNIKRILGVTPGG--GANLGLDEKWAYNIVKQ 298

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGE F+RN+G  S LKI RG NA W++GGLMYA PIR
Sbjct: 299 VGNYGESFERNVGQGSPLKIKRGLNAQWTQGGLMYALPIR 338


>gi|144899134|emb|CAM75998.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 340

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 154/341 (45%), Positives = 235/341 (68%), Gaps = 3/341 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K F    +   +   +  +     +  +K +GF++CG+N GL GF+     G+W G DVD
Sbjct: 2   KAFKACAIAATLAVTSMPAWAGPTVDAVKAKGFVQCGVNLGLYGFSAPDDKGNWSGLDVD 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
            CRA+++A+F D SK++Y PL+A++R  ALQS +ID+L+RNT WTL R+ + GL F    
Sbjct: 62  ACRAVAAAVFGDASKVKYTPLSAQQRLPALQSGEIDLLARNTTWTLSRDTANGLNFTVTN 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+DGQGF++  K G+ +  +L+GA++CV  GTTTE  LAD+F+A+ M Y P+V E+ EE+
Sbjct: 122 YYDGQGFMVPTKLGVKAAKELNGATVCVLPGTTTEQNLADWFRANKMTYKPVVIEKNEEL 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
            +A+ A RCD YT D S L A++      P++++ILP++ISK PLA A+  GD +W ++V
Sbjct: 182 ASAFIAGRCDVYTSDASQLAAIRANEMPNPADYLILPELISKEPLAVAVRHGDDQWMDVV 241

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
            W+ YAM+ AEE G+T  N++Q++  + +P+++R LG+  ++  G+ALGL + W   II+
Sbjct: 242 RWSIYAMIAAEEKGVTMANVDQMAASSPDPEIKRLLGV--TAGNGKALGLDEAWAKTIIK 299

Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            +GNYGE FDRN+G+ S+LKI RG NAL+++GGLMYAPP +
Sbjct: 300 QVGNYGESFDRNVGSGSKLKIARGQNALYTQGGLMYAPPFK 340


>gi|123444011|ref|YP_001007981.1| ABC transporter periplasmic solute-binding protein [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122090972|emb|CAL13855.1| Putative ABC transporter periplasmic solute binding protein
           [Yersinia enterocolitica subsp. enterocolitica 8081]
          Length = 341

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 161/343 (46%), Positives = 229/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    L   +   +A   L  +KK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++AIF D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G+ F 
Sbjct: 61  DVDVCRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P E ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+T KN+ +++   T PD+   LG +   N G+ L +  DW  +I
Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEELAAKPTTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE FDRN+G  SELKI RG NALW+ GGL YAPP+R
Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNNGGLQYAPPVR 341


>gi|89070522|ref|ZP_01157811.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Oceanicola
           granulosus HTCC2516]
 gi|89043829|gb|EAR50027.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Oceanicola
           granulosus HTCC2516]
          Length = 339

 Score =  345 bits (886), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 154/343 (44%), Positives = 219/343 (63%), Gaps = 5/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L +    + ++ A+ L D+K RG L CG++TGL GF+   ANG W+GFD
Sbjct: 1   MKKSVFLG--ALTVAGLAAGASAAATLDDVKARGTLNCGVSTGLTGFSAPDANGVWQGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V FCRAL++A+  DP+ ++++P   + RF AL S +ID+L+RNT WT  R+  L   F  
Sbjct: 59  VAFCRALAAAVLGDPNAVEFVPTTGQTRFTALSSNEIDVLARNTTWTFSRDNDLKFEFAG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGFI+ ++ G++S  +L GA++C+Q GTTTEL LAD+F+ ++M+Y P+  E   
Sbjct: 119 VNYYDGQGFIVPRELGVASAMELDGATVCIQTGTTTELNLADFFRVNDMEYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CDAYT D S L A + T + P +HVILP+IISK PL P +  GD EW +I
Sbjct: 179 EAQQQYLAGACDAYTTDASGLAATRATFENPEDHVILPEIISKEPLGPLVRHGDPEWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTN-PDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           V WT  A++ AEE G+T  NI Q++ +  +  +V R LG +    +G  +GL  DW  R 
Sbjct: 239 VRWTLQALIAAEEYGVTSANIEQMASEAGDNAEVNRLLGTE--GELGAMIGLDSDWAQRA 296

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I   GNYGE+F+ N+G  S + + RG NA +S GGL+YA P R
Sbjct: 297 IAAGGNYGEIFENNIGESSPVGLARGLNAQYSNGGLIYALPFR 339


>gi|254504024|ref|ZP_05116175.1| lysine-arginine-ornithine-binding periplasmic protein [Labrenzia
           alexandrii DFL-11]
 gi|222440095|gb|EEE46774.1| lysine-arginine-ornithine-binding periplasmic protein [Labrenzia
           alexandrii DFL-11]
          Length = 325

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 163/316 (51%), Positives = 227/316 (71%), Gaps = 3/316 (0%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L D+K +GF++CG++ GL GF+   A G+W G DVD CRA+++A+F D S +++ PL+AK
Sbjct: 13  LEDVKGKGFIQCGVSQGLPGFSNPDAQGNWTGLDVDLCRAMAAAVFGDASAVKFTPLSAK 72

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
           ERF ALQS ++D+LSRNT WT+ R+  LGL F  + Y+DGQGF++ K  G++S  ++SGA
Sbjct: 73  ERFTALQSGEVDVLSRNTTWTMSRDTQLGLNFAGVNYYDGQGFMVRKDLGVTSALEMSGA 132

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           S+C   GTTTEL +ADYF+A+NM Y  + FE+ +E+ AAY A RCD YT D S LYA +L
Sbjct: 133 SVCTNTGTTTELNVADYFRANNMPYEIVAFEKADEVVAAYDAGRCDVYTTDASGLYAQRL 192

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
               P +H++LP+IISK PL P + QGD EW+NI  WT  AM+ AEELG+T  N++++ K
Sbjct: 193 KLTNPGDHMVLPEIISKEPLGPVVRQGDDEWFNIAKWTLNAMINAEELGVTSANVDEM-K 251

Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326
            + NP V+R LG +     GEA+GL+ DW Y I++++GNY E F+ N+G  + L I RG 
Sbjct: 252 ASDNPSVKRLLGAE--GAFGEAIGLSNDWAYNIVKNVGNYEESFNANVGPDTPLGISRGV 309

Query: 327 NALWSKGGLMYAPPIR 342
           NALWS GG +YAPP+R
Sbjct: 310 NALWSNGGFLYAPPVR 325


>gi|238789893|ref|ZP_04633673.1| Extracellular solute-binding protein, family 3 [Yersinia
           frederiksenii ATCC 33641]
 gi|238721966|gb|EEQ13626.1| Extracellular solute-binding protein, family 3 [Yersinia
           frederiksenii ATCC 33641]
          Length = 341

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 161/343 (46%), Positives = 229/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    L   +   +A   L  +KK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++AIF D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G+ F 
Sbjct: 61  DVDVCRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P E ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+T KN+  ++   + PD+   LG +   N G+ L +  DW  +I
Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEALAAKPSTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE FDRN+G  SELKI RG NALW+KGGL YAPP+R
Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNKGGLQYAPPVR 341


>gi|224371700|ref|YP_002605864.1| amino acid-binding periplasmic amino acid binding protein
           [Desulfobacterium autotrophicum HRM2]
 gi|223694417|gb|ACN17700.1| amino acid-binding periplasmic amino acid binding protein
           [Desulfobacterium autotrophicum HRM2]
          Length = 332

 Score =  345 bits (885), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 146/334 (43%), Positives = 221/334 (66%), Gaps = 2/334 (0%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           ++ +++  F      A  L D++ +  L CGI+ G+ GF+   + G W GFDVD  RA++
Sbjct: 1   MIFIMMGAFPCTGPWAGTLEDVRAKDVLTCGISEGIPGFSIPDSTGKWVGFDVDMARAVA 60

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
           +A+  DP KI+++PL +K++ +A+ S Q+D+ SR T WTL R+   G+ F  I ++DGQG
Sbjct: 61  AAVLSDPQKIKFVPLASKQKIIAVSSGQVDLTSRTTTWTLKRDGKQGVDFTKIVFYDGQG 120

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
           F++ K  G+ S +++ GA++CV AGTT+EL LAD+ +A+ +K   +VF+  +E   AY  
Sbjct: 121 FMVKKALGVDSATKIDGATVCVTAGTTSELNLADFARANGLKIEALVFDGKKEALNAYAT 180

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            RCD +T D+S L +L+ T   P++H I+P++ISK PLAP +  GD +W +IV+W    +
Sbjct: 181 GRCDCFTTDVSQLASLRTTLPNPNDHEIMPEVISKEPLAPLVRHGDNQWKDIVTWVLNGL 240

Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308
           V AEE GIT  N+ ++ + + NP VQR LG  KS + G  +GL KDW  R+I+ +GNYGE
Sbjct: 241 VAAEEYGITSANVLEMKEKSENPVVQRMLG--KSGDTGSYIGLDKDWMVRVIQAVGNYGE 298

Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++DR+ G  + L IPRG N LW+KGGL YA PIR
Sbjct: 299 IYDRHFGPATALNIPRGVNRLWTKGGLQYALPIR 332


>gi|15966449|ref|NP_386802.1| putative amino acid-binding periplasmic signal peptide protein
           [Sinorhizobium meliloti 1021]
 gi|15075720|emb|CAC47275.1| Putative amino acid-binding periplasmic signal peptide protein
           [Sinorhizobium meliloti 1021]
          Length = 331

 Score =  345 bits (885), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 155/334 (46%), Positives = 229/334 (68%), Gaps = 3/334 (0%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +      F    +  A+ L  +K+RG L+CG++ G++GF+     G+W GFD+DFCRA++
Sbjct: 1   MALFATAFLAGTTAQAATLDVVKQRGELRCGVSQGVLGFSAPDDKGEWSGFDIDFCRAVA 60

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQG 128
           +A    P K++Y+PL+ KERF ALQS ++D+LSR T WTL R+  LG++F  + Y+DGQ 
Sbjct: 61  AATLGSPDKVKYVPLSTKERFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVGVNYYDGQA 120

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
           F++    G+ SV +LSGAS+C + GTTTE  +ADYF A+ ++Y  I FE+ ++   A+ +
Sbjct: 121 FMVRGDIGVKSVKELSGASVCTETGTTTEQNMADYFSANKIEYQVIAFEKADQTIQAFNS 180

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            RCD Y+ D SALY+ +LT + P   V+LP++ISK PL PA+ QGD +W+ +V WT +AM
Sbjct: 181 GRCDVYSTDASALYSQRLTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKVVRWTLFAM 240

Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308
           + AEELGIT++N   + +  T    +RFLGID  +  G+ALGL   W Y+ +  +GNYGE
Sbjct: 241 IEAEELGITRENAASLLESGTAAQ-KRFLGIDNEA--GKALGLDPKWAYQTVAAVGNYGE 297

Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +F+R+LG +S L+I RG N LW+ GGL+YAPP+R
Sbjct: 298 IFERHLGKESALRIDRGLNKLWNNGGLIYAPPVR 331


>gi|312881587|ref|ZP_07741365.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309370650|gb|EFP98124.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 342

 Score =  345 bits (885), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 161/342 (47%), Positives = 228/342 (66%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFS-TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++        + +      L  + K+GF+ CG++TGL GF+   + G+W+G D
Sbjct: 4   KLTLLASVVAASSALIATHAFAAGDTLDKVTKQGFITCGVSTGLPGFSNPNSKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL+SA+  D  K++Y+PL AKERF ALQS ++D+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQALASAVLGDKKKVKYVPLTAKERFTALQSGEVDVLSRNTTWTLHRDTALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+ S  +L GAS+CVQ+GTTTEL LADYF+   MKY P+VF+   
Sbjct: 124 VNYYDGQGFMVKKDLGLKSAKELDGASVCVQSGTTTELNLADYFRNSGMKYRPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    P+   +LP+IISK PL P + QGD +W+NI
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLQDPASAQVLPEIISKEPLGPVVRQGDDQWFNI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AMV AEE GI+ KN +++ K + +P+++R LG++     G+ LG+  DW Y+I+
Sbjct: 244 AKWTLAAMVNAEEYGISSKNADEMLK-SKDPNIRRILGVE--GPKGKGLGIRDDWGYQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGQGSPLQISRGVNALWNAGGFMYAPPIR 342


>gi|307152419|ref|YP_003887803.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7822]
 gi|306982647|gb|ADN14528.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7822]
          Length = 356

 Score =  345 bits (884), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 142/357 (39%), Positives = 220/357 (61%), Gaps = 22/357 (6%)

Query: 3   KDFFVSILCLIILFFT--------------SFSTNASI--LGDIKKRGFLKCGINTGLVG 46
           +   V+++ L+                   +   N     L  IK RG L CG+N  + G
Sbjct: 5   RYLLVAVILLVTSLTACGEGTNNAGNSNTQASPANGETSRLDTIKARGTLICGVNGEVPG 64

Query: 47  FAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDW 106
           F+ V   G ++G DVD CRA+++A+FDDP+K+++  L A++RF A+QS ++DIL+RNT W
Sbjct: 65  FSFVDEKGQFEGLDVDMCRAVAAALFDDPNKVEFRKLTAEQRFTAVQSGEVDILNRNTTW 124

Query: 107 TLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKA 166
           TL R+ S G+ F P T++DGQG ++ K  GI+ +  L G SICV +GTTTE  LAD  + 
Sbjct: 125 TLSRDTSTGMEFGPTTFYDGQGMMVTKASGITKLEDLKGKSICVLSGTTTEQNLADQMRK 184

Query: 167 HNMK-YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
             +  Y P+  + V+++ AAY+  RC+  T D S L A +    +P +H++L  ++SK P
Sbjct: 185 RGVTAYTPVASDDVDQLYAAYQEGRCEGITSDRSQLVARRSVLPKPQDHIVLDVVMSKEP 244

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285
           L   +  GD++W++ V W  YA++  EELGI  KNI    K + +P+V+RFLG++    +
Sbjct: 245 LGTLVADGDSKWFDTVKWITYAVIEGEELGINSKNIANFDK-SQDPNVRRFLGLE--GTL 301

Query: 286 GEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           G+ +GL  D+  R+I+H+GNYGE+++RN+G    L + RG N LW+ GGL+Y+PP R
Sbjct: 302 GQDMGLPNDFAARVIKHVGNYGEIYERNIGK--PLGLERGPNRLWTNGGLLYSPPFR 356


>gi|238794642|ref|ZP_04638248.1| Extracellular solute-binding protein, family 3 [Yersinia intermedia
           ATCC 29909]
 gi|238726031|gb|EEQ17579.1| Extracellular solute-binding protein, family 3 [Yersinia intermedia
           ATCC 29909]
          Length = 341

 Score =  345 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 160/343 (46%), Positives = 228/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    L   +   +A   L  +KK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKIMISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G+ F 
Sbjct: 61  DVDVCRGVAAAVFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P E ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+T KN+  ++   T PD+   LG +   N G+ L +  DW  +I
Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEALAAKPTTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE FDRN+G  SELKI RG NALW+ GGL YAPP+R
Sbjct: 299 VKQVGNYGESFDRNVGLGSELKIKRGQNALWNNGGLQYAPPVR 341


>gi|28898394|ref|NP_797999.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839329|ref|ZP_01991996.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           parahaemolyticus AQ3810]
 gi|260366020|ref|ZP_05778498.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           parahaemolyticus K5030]
 gi|260876625|ref|ZP_05888980.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           parahaemolyticus AN-5034]
 gi|260898001|ref|ZP_05906497.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           parahaemolyticus Peru-466]
 gi|260901584|ref|ZP_05909979.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           parahaemolyticus AQ4037]
 gi|28806611|dbj|BAC59883.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus RIMD 2210633]
 gi|149747161|gb|EDM58149.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           parahaemolyticus AQ3810]
 gi|308088041|gb|EFO37736.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           parahaemolyticus Peru-466]
 gi|308094322|gb|EFO44017.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           parahaemolyticus AN-5034]
 gi|308108540|gb|EFO46080.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           parahaemolyticus AQ4037]
 gi|308114193|gb|EFO51733.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           parahaemolyticus K5030]
 gi|328473628|gb|EGF44463.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [Vibrio parahaemolyticus 10329]
          Length = 342

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 166/342 (48%), Positives = 230/342 (67%), Gaps = 4/342 (1%)

Query: 2   YKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
                 S++        + +  A   L  + K+GFL CG++TGL GF+   + G+W+G D
Sbjct: 4   KLTILASVVAASTAMMATSAQAADTTLDKVTKQGFLTCGVSTGLPGFSNPNSKGEWEGID 63

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V++C+AL++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  
Sbjct: 64  VEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVG 123

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  GISS  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   
Sbjct: 124 VNYYDGQGFMVKKDLGISSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAA 183

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +    + A RCD  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W+NI
Sbjct: 184 QTSKGFDAGRCDVLTTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQWFNI 243

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             WT  AMV AEE GIT KN +++ K + +P+++R LG+D     G+ LG+  DW Y+++
Sbjct: 244 AKWTLAAMVNAEEYGITSKNADEMLK-SQDPNIKRILGVD--GPKGKGLGIRDDWGYQVV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 301 KQVGNYGESFERTVGKGSPLEIARGVNALWNAGGFMYAPPIR 342


>gi|24114551|ref|NP_709061.1| putative periplasmic binding transport protein [Shigella flexneri
           2a str. 301]
 gi|24053744|gb|AAN44768.1| putative periplasmic binding transport protein [Shigella flexneri
           2a str. 301]
 gi|281602643|gb|ADA75627.1| putative periplasmic binding transport protein [Shigella flexneri
           2002017]
          Length = 341

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 155/343 (45%), Positives = 230/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL  F+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPRFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ + NY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 IKQVSNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341


>gi|319779135|ref|YP_004130048.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Taylorella equigenitalis MCE9]
 gi|317109159|gb|ADU91905.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Taylorella equigenitalis MCE9]
          Length = 336

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 151/343 (44%), Positives = 226/343 (65%), Gaps = 8/343 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L +  L   S    A  L  +K RG + CG  TG  GF+     G+W+G D
Sbjct: 1   MKK----LSLLIAGLVLASTQVQADTLETVKSRGHVVCGTTTGFAGFSAPNDKGEWEGLD 56

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD C+++++A+F D SK + +PLN+++RF ALQS +IDIL+RNT  T  R+ ++GL    
Sbjct: 57  VDLCKSIAAAVFGDASKFKTVPLNSQQRFTALQSGEIDILTRNTTVTQQRDTAIGLMSPG 116

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + ++DGQGF++ K  G+ S  +L GA++C+Q GT+ E T+AD+ +A+ + Y P+VF++  
Sbjct: 117 VNFYDGQGFLIKKDLGVKSAKELDGATVCMQTGTSNENTMADWARANKITYKPVVFDQFN 176

Query: 181 EIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E+  A+ + RCD +T D S L +++      P ++V+LP+IISK PL P + Q D +W+N
Sbjct: 177 EVVNAFASGRCDVFTTDASGLASIRISKLSNPDDYVVLPEIISKEPLGPFVRQSDDKWFN 236

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W  +A   AEELGIT KN+++  K++TNP+VQR LG+  +   G+ LGL++DW Y++
Sbjct: 237 IVKWVMHAQWNAEELGITSKNVDE-QKNSTNPNVQRLLGV--TEGSGKNLGLSEDWAYQV 293

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNYGE FDRN+G  S LK+PRG N L++ GGL Y  PIR
Sbjct: 294 IKQVGNYGESFDRNVGKDSVLKVPRGLNKLYTDGGLHYGLPIR 336


>gi|84685382|ref|ZP_01013280.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666539|gb|EAQ13011.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Rhodobacterales
           bacterium HTCC2654]
          Length = 338

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 160/342 (46%), Positives = 218/342 (63%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L +  F + S +A+ L D++ RG LKCG N+GL GFA   ANG W+GFD
Sbjct: 1   MKKSVFLG--ALTVAGFVAGSASAATLDDVQARGSLKCGSNSGLTGFAAPDANGHWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  DP  ++++P   K RF AL S ++DIL RNT WTL R++ L   F  
Sbjct: 59  VAVCRAVAAAVLGDPEAVEFVPTTPKTRFTALASGEVDILVRNTTWTLTRDVDLKFTFTG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGFI+ K  G+SS  +L GA++C+Q GTTTEL LAD+F+ +N+ Y P+  E   
Sbjct: 119 VNYYDGQGFIVPKALGVSSAKELDGATVCIQTGTTTELNLADFFRTNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + + + P++H ILP+IISK PL P +  GD EW +I
Sbjct: 179 EAQQQYLAGACDTYTTDASGLAATRASFENPADHAILPEIISKEPLGPLVRHGDDEWADI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A+V AEE GIT  NI +++  T NP++ R LG +    +GE LGL  DW  + I
Sbjct: 239 VRWTLNALVAAEEFGITSTNIEELASGTDNPEINRILGTE--GTMGEMLGLEADWAMKAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F++N+G  + + + RG NA W  GGL YAPP R
Sbjct: 297 AAGGNYGEIFEKNIGESTPIGLARGLNAQWKDGGLQYAPPFR 338


>gi|238798512|ref|ZP_04641991.1| Extracellular solute-binding protein, family 3 [Yersinia mollaretii
           ATCC 43969]
 gi|238717674|gb|EEQ09511.1| Extracellular solute-binding protein, family 3 [Yersinia mollaretii
           ATCC 43969]
          Length = 341

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 161/343 (46%), Positives = 229/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K  F +++    L   +   +A   L  +KK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMFSTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++AIF D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G+ F 
Sbjct: 61  DVDVCRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P E ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           +V WT +AM+ AEE+G+T KN+  ++   T PD+   LG +   N G+ L +  DW  +I
Sbjct: 241 VVRWTLFAMLNAEEMGVTSKNVEALAAKPTTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE FDRN+G  SELKI RG NALW+ GGL YAPP+R
Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNNGGLQYAPPVR 341


>gi|330429782|gb|AEC21116.1| putative extracellular solute-binding protein [Pusillimonas sp.
           T7-7]
          Length = 338

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 149/343 (43%), Positives = 222/343 (64%), Gaps = 6/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F  +    +L  +  + +A  L  +K+RG + CG+ TG  GF+   A G W+G D
Sbjct: 1   MRK--FKYVAGAAVLAASFSAAHADTLDVVKERGVVHCGVTTGFAGFSAPDAKGVWQGLD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A   D  K + +PL++++RF ALQS +ID+L+RNT  T  R+ +LG     
Sbjct: 59  VDLCRAVAAATLGDAEKFKAVPLSSQQRFTALQSGEIDLLARNTTVTQQRDTALGAISAG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + ++DGQGF++ K  G+SS  +L GAS+C+Q GT+ E T+AD+ +A+N+ Y P+V E+  
Sbjct: 119 VNFYDGQGFLVPKSLGVSSAKELDGASVCMQTGTSNENTMADWARANNITYKPVVIEQFN 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E+  A+ A RCD +T D S L +++      P ++ +LP+IISK PL P + QGD  W N
Sbjct: 179 EVVNAFAAGRCDVFTTDASGLASIRISKLSNPDDYQVLPEIISKEPLGPFVRQGDDRWLN 238

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           +V W+  AM+ AEELGIT  N+++  K + NP+V+R LG+  +   G+ LG+ + W Y I
Sbjct: 239 VVKWSLQAMIGAEELGITSANVDEQLK-SENPNVKRLLGV--TEGAGKNLGVDEKWAYNI 295

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNYGE FDRN+G  S L+I RG NA W+ GGLMY  P+R
Sbjct: 296 IKQVGNYGESFDRNVGKGSPLQIERGLNAQWTDGGLMYGLPVR 338


>gi|239815922|ref|YP_002944832.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
 gi|239802499|gb|ACS19566.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           S110]
          Length = 344

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 154/320 (48%), Positives = 220/320 (68%), Gaps = 3/320 (0%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
              L  +K+RG +KCG+  G+ GF+     G+W G DVD CRA+++A+  DP K+ ++PL
Sbjct: 27  GKTLDAVKQRGTVKCGVTNGVAGFSAPDTQGNWSGLDVDTCRAIAAAVLGDPKKVDFVPL 86

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           N+++RF ALQ+ +IDIL+RNT WTL R+ SLG  F  ITY+DGQGF++ KK  ++S  QL
Sbjct: 87  NSQQRFSALQAGEIDILARNTTWTLTRDASLGFNFTTITYYDGQGFLVPKKLKVTSAKQL 146

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
             A+IC Q+GTT E  ++DYF+A N+    +VFE  E    A+ + RC A+T D SAL  
Sbjct: 147 KNATICTQSGTTNEKNVSDYFRAQNIPVKTVVFESFEASFKAFFSGRCQAFTTDASALAG 206

Query: 204 LKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           L+      P ++VILP++ISK PLAP + +GD EW+ I  W   A++ AEE G+TQ N +
Sbjct: 207 LRNKEAPNPDDYVILPELISKEPLAPLVRRGDDEWFAIAKWVPNALIEAEEFGVTQANAD 266

Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322
           ++   + +P  QR LG     ++G+ LGL KDW++R I+ +GNYGEMF+RN+G +S LK+
Sbjct: 267 ELKAGSKDPAQQRLLGA--GEDLGKLLGLDKDWSFRAIKAVGNYGEMFERNVGPKSVLKL 324

Query: 323 PRGYNALWSKGGLMYAPPIR 342
           PRG N LW+KGGL+YAPP+R
Sbjct: 325 PRGSNNLWNKGGLIYAPPVR 344


>gi|49087174|gb|AAT51425.1| PA3858 [synthetic construct]
          Length = 342

 Score =  343 bits (881), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 157/342 (45%), Positives = 236/342 (69%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M   +   +L  + L  ++ +   + L   K++G+++CG++ GL GF+   A G +KG D
Sbjct: 4   MKGTWL--LLAAVCLGASATAEAGATLDAGKRKGYVQCGVSDGLPGFSYADAKGRFKGLD 61

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRAL++A+F D  K+++ PL+A ERF ALQS  +D+LSRNT WT  R+ +LG+ F  
Sbjct: 62  VDICRALAAALFGDAEKVRFTPLSATERFSALQSGTVDLLSRNTSWTSSRDTALGIHFTG 121

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TYFDGQGF++++K G+SS  +L  A++C+Q+GTT EL +ADYF+AH ++Y  ++ +  E
Sbjct: 122 VTYFDGQGFLVNRKLGVSSARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYE 181

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A  A +CD  + D S LYA +L   +P ++V+LP++ISK PL PA+ QGD  W+NI
Sbjct: 182 KSARALEAGQCDVLSSDQSQLYAQRLKLAKPEQYVVLPEVISKEPLGPAVRQGDEAWFNI 241

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT Y ++ AEELG+T  N+ + ++D+ NPDV R LG +   + G+ L L +DW  +++
Sbjct: 242 VRWTLYGLLNAEELGVTSSNVERQARDSRNPDVARLLGSE--GDAGKDLQLPRDWVVQMV 299

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL YAPPIR
Sbjct: 300 RQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGLHYAPPIR 341


>gi|238782940|ref|ZP_04626968.1| Extracellular solute-binding protein, family 3 [Yersinia bercovieri
           ATCC 43970]
 gi|238716143|gb|EEQ08127.1| Extracellular solute-binding protein, family 3 [Yersinia bercovieri
           ATCC 43970]
          Length = 341

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 162/343 (47%), Positives = 228/343 (66%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    L   +   +A   L  +KK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKTIISTLVAAASLVALAGQAHAGTTLDAVKKKGFVQCGISDGLPGFSYADASGKFSGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++AIF D  K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G+ F 
Sbjct: 61  DVDVCRGVAAAIFGDAEKVKYTPLTAKERFTALQSGEVDILSRNTTWTSSRDAGMGMLFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+ M+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHNKAGLKSAKELDGATVCIQAGTDTELNVADYFKANKMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++   +P E ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDSGRCDTLASDQSQLYALRIKLGKPDEFIVLPEVISKEPLGPVVRRGDEDWFA 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +AM+ AEE+G+T KN+  ++   T PD+   LG +   N G+ L +  DW  +I
Sbjct: 241 IVRWTLFAMLNAEEMGVTSKNVEALAAKPTTPDMAHLLGQE--GNYGKDLKVPNDWVVKI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNYGE FDRN+G  SELKI RG NALW+ GGL YAPPIR
Sbjct: 299 VKQVGNYGESFDRNVGMGSELKIKRGQNALWNSGGLQYAPPIR 341


>gi|300718662|ref|YP_003743465.1| L-amino acid ABC transporter, solute-binding protein [Erwinia
           billingiae Eb661]
 gi|299064498|emb|CAX61618.1| L-amino acid ABC transporter, solute-binding protein [Erwinia
           billingiae Eb661]
          Length = 341

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 164/343 (47%), Positives = 233/343 (67%), Gaps = 3/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    +++    LF  +   +A   L  IKK+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMLSTLVAAAALFAVANQAHAGTTLDAIKKKGFIQCGISDGLPGFSFADASGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA ++A+F D +K++Y PL AKERF ALQS ++DILSRNT WT  R+  +G  F 
Sbjct: 61  DVDVCRAAAAAVFGDATKVKYTPLTAKERFTALQSGEVDILSRNTTWTSARDGGMGFIFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DG GF+ H+K G+ S  +L GA++C+QAGT TEL +ADYFKA+NM+Y P+ F+R 
Sbjct: 121 GVNYYDGIGFLTHQKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMQYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A    RCD    D S LYAL++   +P+E ++LP++ISK PL P + +GD +W+ 
Sbjct: 181 DESAKALDTGRCDTLASDQSQLYALRIKLGKPNEFIVLPEVISKEPLGPVVRRGDDDWFT 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV W+ YAM+ AEE+GIT  N++Q++   TNPD+   LG +   + G+ L L   W Y I
Sbjct: 241 IVKWSLYAMLNAEEMGITSANVDQLAAKPTNPDMAHLLGSE--GDFGKDLKLDNKWAYNI 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++ +GNY E+FDRN+G  S+LKI RG NALW+KGG+ YAPP+R
Sbjct: 299 VKQVGNYQEVFDRNVGKDSQLKIARGQNALWNKGGIQYAPPVR 341


>gi|209695504|ref|YP_002263433.1| general L-amino acid-binding periplasmic protein precursor
           [Aliivibrio salmonicida LFI1238]
 gi|208009456|emb|CAQ79742.1| general L-amino acid-binding periplasmic protein precursor
           [Aliivibrio salmonicida LFI1238]
          Length = 342

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 163/339 (48%), Positives = 230/339 (67%), Gaps = 3/339 (0%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             F +I     L  T  +     L  + K G+L+CG++TGL GF+   + G+W+G DV++
Sbjct: 7   TLFAAIATSAALLSTQATAADGTLEKVVKNGYLQCGVSTGLPGFSNPNSKGEWEGIDVEY 66

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
           C+A+++A+  D +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL F  + Y
Sbjct: 67  CQAVAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLNFVGVNY 126

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           +DGQGF++ K+ G++S  +L GAS+CVQ+GTTTEL LADYF+ ++M+Y P+VF+   +  
Sbjct: 127 YDGQGFMVKKELGLTSAKELDGASVCVQSGTTTELNLADYFRNNSMEYKPVVFDTAAQTS 186

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
             + A RCD  T D S LYAL+L    P    ILP+IISK PL P + QGD +W+NI  W
Sbjct: 187 KGFDAGRCDVLTTDQSGLYALRLNLKDPKTAQILPEIISKEPLGPVVRQGDDKWFNINKW 246

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303
              AM+ AEE GIT  N +Q+ K + +P+++R LG+D     G+ LG+  DW Y++I+ +
Sbjct: 247 VLSAMINAEEYGITSANADQMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVIKQV 303

Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GNYGE F+R +G  S L+I RG NALW+ GG MYA PIR
Sbjct: 304 GNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAAPIR 342


>gi|209524398|ref|ZP_03272947.1| extracellular solute-binding protein family 3 [Arthrospira maxima
           CS-328]
 gi|209495189|gb|EDZ95495.1| extracellular solute-binding protein family 3 [Arthrospira maxima
           CS-328]
          Length = 355

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 140/355 (39%), Positives = 222/355 (62%), Gaps = 16/355 (4%)

Query: 2   YKDFFVSILCLIILFFTSF--------------STNASILGDIKKRGFLKCGINTGLVGF 47
            + F + + CL  L  T+                +  S L  +K RG L CG++ G+ GF
Sbjct: 3   KRGFLLLVSCLSALSLTACEPGGSPGSDGLAAGGSGQSRLNVVKNRGVLICGVDGGIPGF 62

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
           + V  +G++ G DVD C+A+++A+FDDP+ +QY  L++ ERF A+++ ++D+LSRNT WT
Sbjct: 63  SFVDQSGEYSGLDVDVCKAVAAALFDDPNAVQYRNLDSTERFEAMRAGEVDMLSRNTTWT 122

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
           L R+ S+G+ F P T+ DGQG ++    GI+S+      ++CV+AGTTTEL L D  +  
Sbjct: 123 LSRDTSVGMEFAPTTFHDGQGMMVRADSGITSLEDFQDRAVCVEAGTTTELNLTDNMRER 182

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
            + +  + F++ +   AAY   RC+  T D S L A + T   P++H+IL   +SK PL 
Sbjct: 183 GITFETVTFQQADPAYAAYAEGRCEGMTSDKSQLLARRSTLPNPNDHIILDVTMSKEPLG 242

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGE 287
           P  +  D+ W++ V W  +A+  AEELGITQ N+ ++++ + NP ++RFLG++   ++G 
Sbjct: 243 PVTLNNDSAWFDTVKWVTFALFEAEELGITQANVEEIAQTSENPTIRRFLGVE--GDLGT 300

Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            +GLT D+  R+IRH+GNY E++DRNLG  S+  +PR  N LW+ GGL+++PP R
Sbjct: 301 GMGLTNDFAARVIRHVGNYAEVYDRNLGAGSQFNLPRNENELWTNGGLLFSPPFR 355


>gi|163800832|ref|ZP_02194732.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio sp. AND4]
 gi|159175181|gb|EDP59978.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio sp. AND4]
          Length = 342

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 165/339 (48%), Positives = 225/339 (66%), Gaps = 3/339 (0%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
                I     +  T+       L  + K+GFL CG++TGL GF+   A G+W+G DV++
Sbjct: 7   ILASVIAASTTMLATTAHAADGTLEKVTKQGFLNCGVSTGLPGFSNPNAKGEWEGIDVEY 66

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
           C+AL++A+  D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  + Y
Sbjct: 67  CQALAAAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNY 126

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           +DGQGF++ K   +SS   L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   +  
Sbjct: 127 YDGQGFMVKKDLEVSSAKDLDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAAQTS 186

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
             + A RCD  T D S LYAL+L  + PS   +LP+IISK PL P + QGD  W+NI  W
Sbjct: 187 KGFDAGRCDVLTTDQSGLYALRLNLEDPSSATVLPEIISKEPLGPVVRQGDDRWFNIAKW 246

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303
           T   MV AEE GI+ KN++++ K + +P+++R LG+D     G+ LG+  DW Y++I+ +
Sbjct: 247 TLATMVNAEEYGISSKNVDEMKK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVIKQV 303

Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GNYGE F+R +G  S L I RG NALW+ GG MYAPPIR
Sbjct: 304 GNYGESFERTVGTASPLNISRGVNALWNAGGFMYAPPIR 342


>gi|284052552|ref|ZP_06382762.1| extracellular solute-binding protein [Arthrospira platensis str.
           Paraca]
          Length = 355

 Score =  342 bits (878), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 143/357 (40%), Positives = 223/357 (62%), Gaps = 17/357 (4%)

Query: 1   MYKDFFVSIL-CLIILFFTSF----------STNASI----LGDIKKRGFLKCGINTGLV 45
           M K  FV +  CL  L  T+                     L  +K RGFL CG++ G+ 
Sbjct: 1   MRKWSFVLLASCLSALSLTACEPGGSPGSDGPAAGGTGQSRLNVVKNRGFLICGVDGGIP 60

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
           GF+ V  +G++ G DVD C+A+++A+FDDP+ +QY  L++ ERF A++S ++D+LSRNT 
Sbjct: 61  GFSFVDESGEYSGLDVDVCKAVAAALFDDPNAVQYRNLDSTERFEAMRSGEVDMLSRNTT 120

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
           WTL R+ S+G+ F P T++DGQG ++    GI+++      ++CV+AGTTTEL L D  +
Sbjct: 121 WTLSRDTSVGMEFAPTTFYDGQGMMVRADSGITTLEDFQDLAVCVEAGTTTELNLTDNMR 180

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
              + +  + F++ +   AAY   RC+  T D S L A + T   P++H+IL   +SK P
Sbjct: 181 ERGITFETVTFQQADPAYAAYAEGRCEGMTSDKSQLLARRSTLPNPNDHIILDVTMSKEP 240

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285
           L P  +  D+ W++ V W  +A+  AEELGITQ N+ Q+++ + NP ++RFLG++   ++
Sbjct: 241 LGPVTLNNDSAWFDTVKWVTFALFEAEELGITQANVEQIAQTSENPTIRRFLGVE--GDL 298

Query: 286 GEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           G  +GLT D+  R+I+H+GNY E++DRNLG  S+  +PR  N LW+ GGL+++PP R
Sbjct: 299 GTGMGLTNDFAARVIKHVGNYAEVYDRNLGTGSQFNLPRNENELWTNGGLLFSPPFR 355


>gi|89053118|ref|YP_508569.1| lysine-arginine-ornithine-binding periplasmic protein [Jannaschia
           sp. CCS1]
 gi|88862667|gb|ABD53544.1| L-glutamine-binding protein / L-glutamate-binding protein /
           L-asparagine-binding protein / L-aspartate-binding
           protein [Jannaschia sp. CCS1]
          Length = 338

 Score =  342 bits (878), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 152/342 (44%), Positives = 219/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+  L +  L     S     LG++++RG L CG++TGL GF+   ANG+W+GFD
Sbjct: 1   MKKSVFLGTLAVAGLSAGFVSAQ--TLGEVQERGTLNCGVSTGLTGFSAPDANGEWQGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D   ++++P   + RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VSVCRAVAAAVLGDAGAVEFVPTTGQTRFTALSSGEIDMLARNTTWTFSRDVDLAFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ ++ G+SS  +L GA++C+Q GTTTEL LADYF ++NM Y P+  E   
Sbjct: 119 VNYYDGQGFMVPRELGVSSALELDGATVCIQTGTTTELNLADYFSSNNMSYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T + PS HV+LP+I+SK PL P +  GD E+ ++
Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFEDPSAHVVLPEIVSKEPLGPLVRHGDNEFGDV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A++ AEELG+T  N+ ++   T NP+++R LG +   N+GE LGL   W    I
Sbjct: 239 VRWTLNALIAAEELGVTSANVGEIGGTTENPEIRRLLGTE--GNLGEMLGLDAGWAAAAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+FDR++G  + + + RG NA W+ GGL+YAPP R
Sbjct: 297 GAGGNYGEIFDRHIGESTPIGLARGLNAQWTDGGLLYAPPFR 338


>gi|149908408|ref|ZP_01897071.1| general L-amino acid-binding protein [Moritella sp. PE36]
 gi|149808571|gb|EDM68506.1| general L-amino acid-binding protein [Moritella sp. PE36]
          Length = 337

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 166/342 (48%), Positives = 228/342 (66%), Gaps = 5/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        L L +        NA+ L  + K+G L CG++TG+ GF+   + G WKG D
Sbjct: 1   MK--VTKIALILGLASTLPNLVNAATLEQVMKKGVLNCGVSTGIPGFSATDSKGVWKGID 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFCR++++A+  D SK++Y+PL AKERF ALQS +ID+LSR + WT  R+ SLGL F  
Sbjct: 59  VDFCRSVAAAVLGDASKVKYIPLTAKERFTALQSGEIDLLSRASTWTATRDTSLGLNFAG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ G++S  +L GAS C+QAGTTTEL L DYFK++NM+Y  + F+   
Sbjct: 119 VNYYDGQGFLVKKEIGVTSAKELDGASFCIQAGTTTELNLTDYFKSNNMEYKAVTFDTSG 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +   A++  RCDA T D S LY L++  D P   ++LPDIISK PL P + QGD  W+N+
Sbjct: 179 QTIDAFKKGRCDAVTSDASQLYGLRIKLDDPKSAIVLPDIISKEPLGPVVRQGDDAWFNV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+ +A + AEELG+T  N+++  K + NP V+R LG+  +   GE LGL  DW Y+I+
Sbjct: 239 VRWSLFATLEAEELGVTASNVDKQLK-SNNPSVKRLLGV--TGKAGENLGLKSDWAYQIV 295

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNY EMFD N+G  S L I RG N LW+KGGLMYA PIR
Sbjct: 296 KQVGNYEEMFDNNVGKNSPLNIDRGLNNLWNKGGLMYAMPIR 337


>gi|307546909|ref|YP_003899388.1| ABC transporter periplasmic protein [Halomonas elongata DSM 2581]
 gi|307218933|emb|CBV44203.1| ABC-type transport system periplasmic substrate-binding protein
           [Halomonas elongata DSM 2581]
          Length = 342

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 163/339 (48%), Positives = 223/339 (65%), Gaps = 2/339 (0%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
              V++    +   T+ S +A+ L ++K+RG L CG+N GL GF+    +G W+G DV+ 
Sbjct: 6   KALVALSLATLALGTAASASAATLDEVKERGELHCGVNVGLAGFSSSDEDGTWQGLDVET 65

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
           CRA+SSAIF DP K+ + PL AKERF ALQS +ID+LSRNT WT  R+ SLGL F   T+
Sbjct: 66  CRAVSSAIFGDPEKVAFTPLTAKERFTALQSGEIDVLSRNTTWTATRDNSLGLNFTATTF 125

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           +DGQGF++ K+ GI S+  L GASIC+Q+GTT EL LADYF + N+    + F+  ++  
Sbjct: 126 YDGQGFMVDKELGIESLEDLDGASICIQSGTTHELNLADYFPSRNIDIKTVTFDTPDQTA 185

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
             + + RCD  T D S L AL+L    P    IL ++ISK PL P + QGD +W+NI+ W
Sbjct: 186 QGFASGRCDVLTSDTSQLSALRLQLPEPDSVEILTELISKEPLGPVVRQGDDQWFNIIKW 245

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303
           T +AMV AEE+G+   N++++ +D  NP V R LG+D     GE LGL  DW Y II  +
Sbjct: 246 TIFAMVNAEEMGVNSDNVDEMKQDPPNPGVARLLGVD--GTYGEQLGLGNDWAYNIISQV 303

Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GNYGE+F   +G  S L I RG NALW++GG++YAPP+R
Sbjct: 304 GNYGEVFADTVGENSPLGISRGMNALWNEGGILYAPPVR 342


>gi|259416581|ref|ZP_05740501.1| glutamate/glutamine/aspartate/asparagine-binding protein
           bztAprecursor [Silicibacter sp. TrichCH4B]
 gi|259348020|gb|EEW59797.1| glutamate/glutamine/aspartate/asparagine-binding protein
           bztAprecursor [Silicibacter sp. TrichCH4B]
          Length = 335

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 143/334 (42%), Positives = 211/334 (63%), Gaps = 3/334 (0%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           L + ++  ++ +  A  L ++K+RG L CG+  GL GFA +  +G W G +V FCRAL++
Sbjct: 4   LTVALVALSAGTAMAGTLEEVKERGKLICGVYPGLPGFAFLSEDGTWMGSEVAFCRALAA 63

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
           A+  DP+ ++++P  +K RF AL S ++D+L+RNT WT  R++ L   F  + Y+DGQGF
Sbjct: 64  AVLKDPTAVEFVPTPSKTRFTALASGEVDVLARNTTWTFSRDVDLKFEFAGVNYYDGQGF 123

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++ K+ G++S  +L GA++C+Q GTTTEL LAD+F+A+ + Y P+  E   E    Y A 
Sbjct: 124 LVPKELGVTSAKELDGATVCIQTGTTTELNLADFFRANGISYEPVPVETNAESQQQYLAG 183

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
            CD YT D + L A +     P  H+ILP+ ISK PL P +  GD +W ++V WT  A++
Sbjct: 184 ACDVYTTDKAGLAATRSAFADPQNHLILPETISKEPLGPLVRHGDNQWGDVVRWTLNALI 243

Query: 250 TAEELGITQKNINQVSKD-TTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308
            AEELGITQ N+  ++   T NP++ R LG +     GE LGL +DW    I   GNYGE
Sbjct: 244 IAEELGITQDNVTALAASATNNPEINRMLGTE--GTYGEMLGLDQDWAVAAISAGGNYGE 301

Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +F R LG  + + + RG NAL+  GG++YAPP R
Sbjct: 302 IFARFLGEDTLIGLDRGLNALYRDGGILYAPPFR 335


>gi|218437710|ref|YP_002376039.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7424]
 gi|218170438|gb|ACK69171.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7424]
          Length = 362

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 142/356 (39%), Positives = 217/356 (60%), Gaps = 22/356 (6%)

Query: 4   DFFVSILCLIILFFTSFSTNASI----------------LGDIKKRGFLKCGINTGLVGF 47
            F +    L++   T+     +                 L  +K RG + CGIN  + GF
Sbjct: 12  RFLLVAAMLLVTPLTACGGGNNTAGDTTAQTSTSGGTSRLDTVKARGTVICGINGEVPGF 71

Query: 48  AEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
           + V   G + G DVD CRA+++A+FDDP+K+++  L A +RF A+QS ++DIL+RNT WT
Sbjct: 72  SFVDEQGQYSGLDVDMCRAVAAALFDDPTKVEFRKLTADQRFTAVQSGEVDILNRNTTWT 131

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
           + R+ S+G+ F P T++DGQG ++ K  GI+ +  L G S+CV +GTTTE  LAD  +  
Sbjct: 132 ISRDTSVGMDFAPTTFYDGQGIMVTKASGITKLEDLKGKSVCVLSGTTTEQNLADQMRKR 191

Query: 168 NM-KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
            +  Y PI  + V+++ AAY+  RC+  T D S L A +    +P +HV+L  ++SK PL
Sbjct: 192 GIEDYTPIASDDVDQLYAAYQEGRCEGVTSDRSQLVARRSVLPKPEDHVVLDVVLSKEPL 251

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIG 286
            P +  GD++W + + W  YA + AEELGI  +NI +  K + +P+V+RFLG +    +G
Sbjct: 252 GPVVADGDSQWSDTIKWITYATIEAEELGINSQNIGEFEK-SEDPNVKRFLGSE--GTLG 308

Query: 287 EALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           E +GL  D+  R+I+H+GNY E++DRN+G    L + RG N LW+ GGL+Y+PP R
Sbjct: 309 EDMGLNNDFATRVIKHVGNYEEIYDRNIGK--PLGLERGPNQLWTNGGLLYSPPFR 362


>gi|298292513|ref|YP_003694452.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
 gi|296929024|gb|ADH89833.1| extracellular solute-binding protein family 3 [Starkeya novella DSM
           506]
          Length = 337

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 165/342 (48%), Positives = 228/342 (66%), Gaps = 5/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +      L    +  T+   +A  L D+K RG LKCG++ GL GF+     G W GFD
Sbjct: 1   MNR--IAFALAAAGIVMTAGLGHADTLADVKARGTLKCGVSQGLAGFSAKDDKGQWSGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA++SAIFDD SK++Y+PL+A  RF ALQ  +ID+LSRN+ WT+ RE  L L F  
Sbjct: 59  VDLCRAVASAIFDDASKVEYVPLSADARFPALQKGEIDLLSRNSTWTMQREADLKLLFAA 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           ++Y+DGQGF++   K + +  +L  + +C Q+GTT+     D+FK +NM    I    V+
Sbjct: 119 VSYYDGQGFLVPVAKKVDTALELDKSKVCTQSGTTSVGNAKDFFKQNNMALELIELPTVD 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E+  AY   +CD  T D+S LYAL+L   +P+++++LPD+ISK PL P + QGD  W N 
Sbjct: 179 EVVKAYDEGKCDVLTTDVSQLYALRLRLAKPADYIVLPDVISKEPLGPVVRQGDDAWLNA 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+ YA++ AEELGI+Q  ++Q  K +  PDVQRF+G D   + GE LGLTKDW  RI+
Sbjct: 239 VKWSFYALLNAEELGISQATLDQALK-SQKPDVQRFVGTD--GSYGEQLGLTKDWAVRIV 295

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +++GNYGE+F+RN+G QS+L IPRG N LWS GG+ YAPPIR
Sbjct: 296 KNVGNYGEVFERNIGAQSKLGIPRGINQLWSAGGIQYAPPIR 337


>gi|262274329|ref|ZP_06052140.1| amino acid ABC transporter amino acid-binding protein [Grimontia
           hollisae CIP 101886]
 gi|262220892|gb|EEY72206.1| amino acid ABC transporter amino acid-binding protein [Grimontia
           hollisae CIP 101886]
          Length = 381

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 154/327 (47%), Positives = 221/327 (67%), Gaps = 3/327 (0%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
                +   + L  +KK G + CG+ TGL GF+   +NG W+G DV+FC+A+++A+  D 
Sbjct: 58  APAPSAQGENTLEKVKKSGVISCGVGTGLPGFSNPNSNGAWEGIDVEFCQAMAAAVLGDK 117

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K++Y+PL AKERF ALQS +IDILSRNT WTL R+ +LGL F  + Y+DGQGF++ K  
Sbjct: 118 DKVKYVPLTAKERFTALQSGEIDILSRNTTWTLQRDGTLGLNFVGVNYYDGQGFMVKKDL 177

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           G+ S  +L GAS+CVQ+GTTTEL L+DYF+++ M + P+V++  +     + + RCD  T
Sbjct: 178 GVKSALELDGASVCVQSGTTTELNLSDYFRSNGMSFKPVVYDTYDATVKGFESGRCDTLT 237

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D S LYA ++    P   V+LP+IISK PL P + QGD  W+NI  WT   M+  EE G
Sbjct: 238 TDQSGLYASRIKLADPDSAVVLPEIISKEPLGPVVRQGDDNWFNIAKWTLNTMINGEEFG 297

Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
           IT  N++++  ++ +P+++R LG D     G+ LGL  DW Y++I+ +GNYGE F R +G
Sbjct: 298 ITSANVDEMV-NSKDPNIRRILGQD--GPKGKGLGLNDDWGYQVIKQVGNYGESFQRTVG 354

Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342
           + S L+I RG NALWS+GG++YAPPIR
Sbjct: 355 SGSPLQISRGVNALWSEGGILYAPPIR 381


>gi|187476710|ref|YP_784733.1| amino acid-binding periplasmic protein [Bordetella avium 197N]
 gi|115421296|emb|CAJ47801.1| amino acid-binding periplasmic protein [Bordetella avium 197N]
          Length = 338

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 154/344 (44%), Positives = 224/344 (65%), Gaps = 8/344 (2%)

Query: 1   MYKDFFVSILCLIILFFTSF-STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M      S++ L  L  T   S  A  L  +K R  + CG  TG  GF+   A G W+G 
Sbjct: 1   MK---IASLVALAALSLTGLQSAQAGTLDVVKNRDAVVCGTTTGFAGFSAPDAQGVWRGL 57

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRA+++A+  D +KI+ +PLN+++RF ALQS ++D+L+RNT  T  R+ +LG+   
Sbjct: 58  DVDLCRAVAAAVLGDANKIKIVPLNSQQRFTALQSGEVDVLTRNTSVTQQRDTALGIIHA 117

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            I ++DGQGF++ KK G+ S  +L+GA+IC+Q GT+ E TLAD+ +A+N++Y P+V E  
Sbjct: 118 GINFYDGQGFLVPKKLGVKSAKELNGATICLQQGTSNENTLADWARANNVQYTPVVIETF 177

Query: 180 EEIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            E+  A+ A RCD ++ D S L +++    ++P ++++LP++ISK PL P + QGD  W 
Sbjct: 178 NEVVNAFAAGRCDVFSTDASGLASIRISKLEKPDDYIVLPEVISKEPLGPFVRQGDDNWL 237

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           NIV WT  AM+ AEE G+T  N+++  K + NP+V+R LG+      G  +GL   W Y 
Sbjct: 238 NIVYWTLTAMIEAEEYGLTSANVDEQLK-SENPNVRRILGVVP--GAGPNMGLNDKWAYN 294

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I++ +GNYGE FDRN+G  S LKI RG NA W+KGGLMYA PIR
Sbjct: 295 IVKQVGNYGESFDRNVGKGSPLKIDRGLNAQWTKGGLMYALPIR 338


>gi|328543624|ref|YP_004303733.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Polymorphum gilvum SL003B-26A1]
 gi|326413367|gb|ADZ70430.1| Amino acid ABC transporter, periplasmic amino acid-binding protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 300

 Score =  342 bits (876), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 161/303 (53%), Positives = 219/303 (72%), Gaps = 3/303 (0%)

Query: 40  INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
           ++ GL GF+   A G+W G DVD CRA+++A+F D S +++ PL+AKERF ALQS +IDI
Sbjct: 1   MSQGLPGFSNPDAQGNWTGLDVDVCRAVAAAVFGDASAVKFTPLSAKERFTALQSGEIDI 60

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELT 159
           LSRNT WT+ R+ SLGL F  +TY+DGQGF++ K  G++S  +LSGAS+C   GTTTEL 
Sbjct: 61  LSRNTTWTMSRDTSLGLNFAGVTYYDGQGFMVRKALGVTSALELSGASVCTNTGTTTELN 120

Query: 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPD 219
           +ADYF+ +NM Y  + FE+ +E+  AY A RCD +T D S LYA +L    P +H++LP+
Sbjct: 121 VADYFRTNNMPYEIVAFEKSDEVVQAYDAGRCDVFTTDASGLYAERLKLSNPGDHMVLPE 180

Query: 220 IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGI 279
           IISK PL P + QGD +W+NI  WT  AM+ AEELG+T  N++++ K + NP+++R LGI
Sbjct: 181 IISKEPLGPVVRQGDDQWFNIARWTLNAMINAEELGVTSANVDEM-KSSENPEIKRLLGI 239

Query: 280 DKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAP 339
           +     GE + L+ DW Y II+ +GNYGE FDRN+G  + L I RG NALWSKGG++YAP
Sbjct: 240 E--GAFGEGVSLSNDWAYNIIKQVGNYGEAFDRNVGPDTPLGIARGLNALWSKGGILYAP 297

Query: 340 PIR 342
           PIR
Sbjct: 298 PIR 300


>gi|119383545|ref|YP_914601.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Paracoccus denitrificans PD1222]
 gi|119373312|gb|ABL68905.1| L-aspartate-binding protein / L-glutamate-binding protein /
           L-glutamine-binding protein / L-asparagine-binding
           protein [Paracoccus denitrificans PD1222]
          Length = 341

 Score =  341 bits (875), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 159/343 (46%), Positives = 226/343 (65%), Gaps = 3/343 (0%)

Query: 1   MYKD-FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K  FF S+  + +    + +     L ++K RG L CG+NTGL+GFA   ANG+W GF
Sbjct: 1   MKKSVFFGSVTAVALAASGALAAEGDTLKEVKARGVLNCGVNTGLIGFAAPDANGNWSGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV FC+A+++A+  D +KI+Y+P   + RF AL S ++D+L+RN+ WT  R+  L L F 
Sbjct: 61  DVAFCKAMAAAVLGDATKIKYVPTTGQTRFTALSSGEVDLLARNSTWTFQRDTDLKLDFI 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+DGQGF++ K  G+SS  +L+GA+IC+Q GTTTEL LADYFKA+NM Y P+  +  
Sbjct: 121 GVNYYDGQGFMVRKDLGVSSAKELNGATICIQTGTTTELNLADYFKANNMDYQPVNIDSN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E +  Y A  CDAYT D S L A + +   P  H+ILP+IISK PL PA+  GD  W +
Sbjct: 181 AEGEQQYMAGACDAYTTDASGLAATRASFADPENHIILPEIISKEPLGPAVRHGDNNWGD 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           I  WT YA++ AEE G+T  NI++++K + NP+VQR LG   + ++G+ +GL  +W  R 
Sbjct: 241 IARWTLYALIAAEEYGVTSANIDELAKSSQNPEVQRLLGT--TDDLGKMIGLDAEWAKRA 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+  GNYGE+F   +G Q+ + + RG NA W++GGLMYA P R
Sbjct: 299 IKAGGNYGEIFAATIGEQTPIGLARGLNAQWTQGGLMYAMPFR 341


>gi|282899899|ref|ZP_06307860.1| extracellular solute-binding protein, family 3 [Cylindrospermopsis
           raciborskii CS-505]
 gi|281195169|gb|EFA70105.1| extracellular solute-binding protein, family 3 [Cylindrospermopsis
           raciborskii CS-505]
          Length = 378

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 152/354 (42%), Positives = 232/354 (65%), Gaps = 15/354 (4%)

Query: 1   MYKDFFVSILCLIILFFTSF------------STNASILGDIKKRGFLKCGINTGLVGFA 48
           M K F +  +  +I+                     +  G +K    L CG++  L GF+
Sbjct: 28  MAKSFLLLAVAPLIIALLGCNSSPTSSTSTSTVQPRNTTGKVKTNLRLVCGVSGELPGFS 87

Query: 49  EVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
            V+ +  + G DVD CRA+S+A+FD+P K+++  L+AKERF ALQ+ ++D+LSRNT WT 
Sbjct: 88  FVQTDSKYAGIDVDVCRAVSAALFDNPDKVEFRNLSAKERFTALQTGEVDLLSRNTTWTF 147

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHN 168
            R+ S+GL F P+  +DGQG ++ K  GI+S++ L   +IC Q GTTTE  LAD  +   
Sbjct: 148 SRDTSMGLYFSPVVLYDGQGIMIRKNSGINSLADLKNKAICTQTGTTTEQNLADQMRRRG 207

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
           + Y P+VFE +    A Y   RCDA T D SAL + + T  +P ++++L +++S  PLAP
Sbjct: 208 ISYKPVVFEDINVTFATYSEGRCDAITADRSALISRRTTLPKPEDNIVLNELLSSEPLAP 267

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEA 288
           A+ QGD +W+NIV W+ YA++ AEELGI  +NI+Q   ++ +P+++RFLG +   N+G+ 
Sbjct: 268 AVAQGDPQWHNIVKWSVYALIKAEELGINSQNISQF-ANSKDPEIKRFLGTE--GNLGQG 324

Query: 289 LGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GLT D+  RII+H+GNYGE++DR+LG++++L +PRG N L+SKGGL+Y+PP R
Sbjct: 325 IGLTNDFAARIIKHVGNYGEIYDRSLGSKTKLNLPRGQNELYSKGGLLYSPPFR 378


>gi|260772752|ref|ZP_05881668.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           metschnikovii CIP 69.14]
 gi|260611891|gb|EEX37094.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           metschnikovii CIP 69.14]
          Length = 340

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 170/339 (50%), Positives = 230/339 (67%), Gaps = 5/339 (1%)

Query: 6   FVSILCLIILFFTSFSTNAS--ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
             +++C + L  T+    AS   L  +  +G L CGI+TGL GF++  A G W+G DVD+
Sbjct: 5   LATLVCAVSLSLTTHLAFASPTTLDRVLTQGKLTCGISTGLAGFSDADAKGQWQGLDVDY 64

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
           CRAL++A+  D +K++Y+PL A+ERF ALQS Q+D+LSRNT WT  R+ ++GL F  + +
Sbjct: 65  CRALAAAVLGDKNKVEYVPLTARERFNALQSGQVDVLSRNTTWTFERDTTMGLNFVGVNF 124

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           +DGQGF++ KK  I+ VSQL+   ICVQ+ TTT+L L DYF+ H M Y P+VF+   +I 
Sbjct: 125 YDGQGFMVTKKSAITQVSQLNNRPICVQSETTTKLNLDDYFRHHGMSYQPVVFDTAIQIA 184

Query: 184 AAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
            A+ A RC A T D S LYAL+L   +P   +ILP+IISK PL P I +GD  W NI  W
Sbjct: 185 RAFNAERCVAVTADKSGLYALRLNLAKPDSAIILPEIISKEPLGPVIREGDDRWLNITRW 244

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303
           T  AM+ AEELGIT  N++Q  K +TNP+++R LG++    IG  LG+  DW Y+II+ +
Sbjct: 245 TLAAMINAEELGITSANVDQQRK-STNPEIRRLLGVE--GEIGRPLGINNDWAYQIIKQV 301

Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GNY E F RN+G  S L IPRG NALW+ GG+MYA PIR
Sbjct: 302 GNYSESFQRNVGEDSPLAIPRGLNALWNAGGIMYATPIR 340


>gi|254486168|ref|ZP_05099373.1| glutamate/glutamine/aspartate/asparagine-binding protein
           [Roseobacter sp. GAI101]
 gi|214043037|gb|EEB83675.1| glutamate/glutamine/aspartate/asparagine-binding protein
           [Roseobacter sp. GAI101]
          Length = 338

 Score =  340 bits (873), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 156/342 (45%), Positives = 220/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F   + +  L   + +     L D+K+RG L CG+ TGLVGFA   ANG+W+GFD
Sbjct: 1   MNKSVFFGAMTVAGLVAGASAAA--TLDDVKERGKLNCGVTTGLVGFAAPNANGEWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+F DP+ ++++P   K RF AL S +ID L+RNT WT  R++ L   F  
Sbjct: 59  VAVCRAVAAAVFGDPTAVEFIPTTGKTRFTALASGEIDFLARNTTWTFSRDVDLKFDFIG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS   L GA++C+Q GTTTEL LAD+F+A+N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVPKALGVSSAKDLDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L + + T + P +H+ILP+IISK PL P +  GD +W ++
Sbjct: 179 EGQQQYLAGACDTYTTDASGLASTRATFETPGDHIILPEIISKEPLGPLVRHGDNDWGDL 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             W  YA++ AEELG+T  N+ +++  TTNP+V R LG +    +GE LGL+ DW    I
Sbjct: 239 TRWVLYALIAAEELGVTSANVEEMATSTTNPEVARLLGAE--GTLGEMLGLSADWAKNAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F +N+G ++ + + RG NA W+ GGLMYAPP R
Sbjct: 297 ASQGNYGEIFAKNIGEETPIGLARGLNAQWTDGGLMYAPPFR 338


>gi|17231656|ref|NP_488204.1| periplasmic amino acid-binding protein of amino acid ABC
           transporter [Nostoc sp. PCC 7120]
 gi|17133299|dbj|BAB75863.1| periplasmic amino acid-binding protein of amino acid ABC
           transporter [Nostoc sp. PCC 7120]
          Length = 369

 Score =  340 bits (873), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 156/357 (43%), Positives = 222/357 (62%), Gaps = 18/357 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGD---------------IKKRGFLKCGINTGLV 45
           M K   +    LI         +A                    IK RG L CG++  + 
Sbjct: 16  MNKLAVILGASLIFTTTACGGDSAPTTDTSTNSGSTLVANRWNTIKNRGQLICGVSGEVP 75

Query: 46  GFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTD 105
           GF+ V  +G++ G DVD CRA+++A+FD+P  +++  L+AKERF ALQ+ ++DILSRNT 
Sbjct: 76  GFSFVGTDGEYSGIDVDVCRAIAAALFDNPDAVEFRNLSAKERFTALQTGEVDILSRNTT 135

Query: 106 WTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFK 165
           WTL R  S+GL F P+ ++DGQ  ++ K   I S++ L   +ICVQ GTTTE  LAD  +
Sbjct: 136 WTLSRATSVGLEFAPVVFYDGQAIMVRKNSAIKSLADLKDKAICVQTGTTTEQNLADQMR 195

Query: 166 AHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSP 225
             N+ Y P+VFE V    A Y   RCDA T D SAL + + T   P ++V+L ++IS  P
Sbjct: 196 KRNITYKPVVFEDVNVTFATYAEGRCDAITADRSALVSRRTTLPTPEDNVVLDEVISSEP 255

Query: 226 LAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNI 285
           LAPA+ +GD +W N V+W  YA++  EELGI  +N+ Q    + +PDV+RFLG +   ++
Sbjct: 256 LAPAVARGDAKWSNTVNWVVYALIKGEELGINAQNLGQF-TTSNDPDVKRFLGTE--GDL 312

Query: 286 GEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           G+ LGLT D+  RII+H+GNY E++DRNLG +++L + RG N LWSKGGL+Y+PP R
Sbjct: 313 GQGLGLTNDFAARIIKHVGNYAEVYDRNLGPKTKLNLARGQNQLWSKGGLLYSPPFR 369


>gi|242280380|ref|YP_002992509.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
 gi|242123274|gb|ACS80970.1| extracellular solute-binding protein family 3 [Desulfovibrio
           salexigens DSM 2638]
          Length = 336

 Score =  340 bits (873), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 150/338 (44%), Positives = 226/338 (66%), Gaps = 5/338 (1%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
           F  S +CL+I+   S    A  L ++KK GFLK G +    GF+ + +NG   GFDVDF 
Sbjct: 4   FRTSFICLMIVAMASI-AQAGTLDNVKKDGFLKAGTHIENPGFSALDSNGKRVGFDVDFI 62

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           RA+++A+  +  +I+Y PL +KER  ALQS +IDILSR T  T+ R++ LGL F   T +
Sbjct: 63  RAVAAAV--NVPEIKYTPLTSKERLPALQSGEIDILSRTTTHTMSRDVKLGLDFTVTTLY 120

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           DGQG ++ K+ GI+    L GA++C+Q G+TTEL ++D+F+ + M + P+VF++  ++  
Sbjct: 121 DGQGMMVRKELGITDAKDLDGATVCLQTGSTTELNISDFFRKNGMSFTPVVFDKQPDVRK 180

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           AY   RCD +T D+S L A +   ++P+EH+IL ++ISK PL P +  GD +W +IV WT
Sbjct: 181 AYDTGRCDVHTTDVSGLAAQRSLMEKPAEHIILSEVISKEPLGPVVRHGDNQWSDIVRWT 240

Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304
            +  + AEE G+TQ N+ ++  ++ +P+VQR LG  K+ ++   LGL KD   RII+ +G
Sbjct: 241 IWLTMAAEEKGVTQANVEKMFANSKDPEVQRMLG--KTGSLWTDLGLDKDAPVRIIKTVG 298

Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           NYGE+FDRNLG ++ L++ RG N  W++GGL+YAPP R
Sbjct: 299 NYGEIFDRNLGPKTPLRMERGLNKQWNEGGLIYAPPFR 336


>gi|220910023|ref|YP_002485334.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC
           7425]
 gi|219866634|gb|ACL46973.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           7425]
          Length = 364

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 145/326 (44%), Positives = 210/326 (64%), Gaps = 3/326 (0%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
            T+       L  I  RG L CG++  L GF+ V   G++ G DVD CRA+++A+FDDP 
Sbjct: 42  TTADLQGTGRLATILNRGQLICGVSGELPGFSFVDQQGNYAGLDVDVCRAIAAALFDDPE 101

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
            +++  LNAKERF ALQ+ +IDILSRNT  T+ R+ ++G+ F P+ ++DGQG ++  + G
Sbjct: 102 AVEFRNLNAKERFTALQTGEIDILSRNTTLTMSRDTAIGIQFAPVVFYDGQGIMVRNQDG 161

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I S+  L G SIC+Q GTT E  L D  +   + Y P++FE +  + A Y   RC A + 
Sbjct: 162 IRSLKDLQGKSICLQTGTTHEQNLTDQTRKLGIDYQPVIFEDINTMFATYAQGRCQAVSA 221

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           D S L + + T   P+ + ILPD++SK PLAPA+ +GD  W  +V W  Y+++ AEELGI
Sbjct: 222 DRSGLISRRTTLPNPNGNEILPDVLSKEPLAPAVAKGDPTWSTVVEWIIYSLIEAEELGI 281

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
           T +NI    + + +P ++RFLG +   N+G  LGL+ D+  RII+ +GNYGE++DRNLG 
Sbjct: 282 TTQNIESKLQ-SADPTLRRFLGRE--GNLGHGLGLSNDFAVRIIKGVGNYGEIYDRNLGP 338

Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342
            + L + RG N  WSKGGL+Y+PP R
Sbjct: 339 NTLLNLERGLNQQWSKGGLLYSPPFR 364


>gi|254462559|ref|ZP_05075975.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Rhodobacterales
           bacterium HTCC2083]
 gi|206679148|gb|EDZ43635.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 347

 Score =  340 bits (871), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 151/343 (44%), Positives = 214/343 (62%), Gaps = 5/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F     + +    + +  A  L D+K RG L CG+ TGLVGFA   ANG+W+GFD
Sbjct: 9   MKKSVFFG--AMTVAALAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPDANGEWQGFD 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A   DPS ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 67  VGVCRAVAAAALGDPSAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 126

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS  +L GA++C+Q GTTTEL LADYF+ +N+ Y P+  E   
Sbjct: 127 VNYYDGQGFMVPKALGVSSAKELDGATVCIQTGTTTELNLADYFRTNNISYEPVPIETNA 186

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y    CD YT D S L A +   + P +HV+LP+IISK PL P +  GD+EW ++
Sbjct: 187 EAQPLYLEGACDVYTTDASGLAATRAAFENPGDHVVLPEIISKEPLGPLVRHGDSEWGDV 246

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTN-PDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           V W+  A++ AEELG+T  NI  ++    + P++ R LG +    +GE LGL  DW  + 
Sbjct: 247 VRWSLNALIAAEELGVTSANIADMAAAAGDNPEINRLLGTE--GTLGEMLGLDADWAKKA 304

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I   GNYGE+F++N+G  + + + RG NA W+ GGL+Y PP R
Sbjct: 305 IMAGGNYGEIFEKNIGENTPIGLGRGLNAQWTDGGLLYVPPFR 347


>gi|33591762|ref|NP_879406.1| amino acid-binding periplasmic protein [Bordetella pertussis Tohama
           I]
 gi|33599230|ref|NP_886790.1| amino acid-binding periplasmic protein [Bordetella bronchiseptica
           RB50]
 gi|33571405|emb|CAE44886.1| amino acid-binding periplasmic protein [Bordetella pertussis Tohama
           I]
 gi|33575276|emb|CAE30739.1| amino acid-binding periplasmic protein [Bordetella bronchiseptica
           RB50]
          Length = 338

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 148/324 (45%), Positives = 217/324 (66%), Gaps = 4/324 (1%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
                + L  +KKRG + CG  TG  GF+     G W+G DVD CRA+++A+F D SKI+
Sbjct: 18  AGAQGATLDVVKKRGTVVCGTTTGFAGFSAPDKQGTWRGLDVDLCRAVAAAVFGDASKIK 77

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +PLN+++RF ALQS ++D+L+RNT  T  R+ +LG+    I ++DGQGF++ K  G+ S
Sbjct: 78  VVPLNSQQRFTALQSGEVDVLTRNTTVTQQRDTALGIIHAGINFYDGQGFMVPKSLGVKS 137

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
             +L+GA+IC+Q GT+ E TLAD+ +A+ + Y P+V E   E+  A+ + RCD ++ D S
Sbjct: 138 AKELNGATICLQTGTSNENTLADWARANQVSYKPVVIETFNEVVNAFASGRCDVFSTDAS 197

Query: 200 ALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
            L +++    ++P ++V+LP+IISK PL P + QGD  W NIV W+  AM+ AEE G+T 
Sbjct: 198 GLASIRISRLEKPDDYVVLPEIISKEPLGPFVRQGDDAWLNIVRWSLSAMIEAEEYGVTT 257

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
            N+++  K + NP+V+R LG+  +   G  LGL + W Y II+ +GNYGE F+RN+G  S
Sbjct: 258 ANVDEQLK-SENPNVRRILGV--TPGAGANLGLDEKWAYNIIKQVGNYGESFERNVGQGS 314

Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342
            LKI RG NA W++GGLMYA PIR
Sbjct: 315 PLKIQRGLNAQWTQGGLMYALPIR 338


>gi|222526721|ref|YP_002571192.1| extracellular solute-binding protein family 3 protein [Chloroflexus
           sp. Y-400-fl]
 gi|222450600|gb|ACM54866.1| extracellular solute-binding protein family 3 [Chloroflexus sp.
           Y-400-fl]
          Length = 389

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 148/328 (45%), Positives = 219/328 (66%), Gaps = 4/328 (1%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
             T+       +  I  RG L CG+N   L GFA V + G ++GFD+DFCRA+++A+FDD
Sbjct: 65  GTTNQPAAGGQIERILSRGTLICGVNNNPLPGFASVDSAGVYRGFDIDFCRAVAAALFDD 124

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
           P+K+++ PL+A+ERF ALQS +ID+L RN+ WTL R+ +LGL + P T++DGQG ++ K 
Sbjct: 125 PTKVEFRPLSAQERFTALQSGEIDVLIRNSTWTLGRDGTLGLDWAPTTFYDGQGMMVRKD 184

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
            GI ++  + GA+ICVQ GTTTEL LAD F+A  + + P+VF   +   AAY A +CD +
Sbjct: 185 SGIETLEDMDGATICVQTGTTTELNLADQFRARGLTFTPVVFPDGDATRAAYDAGQCDGF 244

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
           T D S L +       P++H IL   +SK PL PA+ QGD +W++ V W  +A   AEE 
Sbjct: 245 TTDKSGLISSLTLLTNPADHKILDVTMSKEPLGPAVRQGDPQWFDAVRWIVFATFQAEEY 304

Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314
           GIT +N++Q    +  P+++RFLGI+    +G  +GL  D+  R++RH+GNY E+++RNL
Sbjct: 305 GITSQNLDQFL-GSDVPEIRRFLGIE--GELGAGIGLPNDFAARVVRHVGNYAEIYNRNL 361

Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342
           G  +   +PRG NAL+++GGL+Y+PP R
Sbjct: 362 GPDTPFNLPRGLNALYTEGGLLYSPPFR 389


>gi|88797541|ref|ZP_01113130.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Reinekea sp. MED297]
 gi|88779713|gb|EAR10899.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Reinekea sp. MED297]
          Length = 331

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 156/331 (47%), Positives = 220/331 (66%), Gaps = 3/331 (0%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
             + L        AS L D++K GFLKCG++TG+ GF+    NG+W G DVD CRA+++A
Sbjct: 3   VAVALSLAFSLAQASTLNDVRKTGFLKCGVSTGIPGFSNPDRNGNWTGLDVDVCRAVAAA 62

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFI 130
           +  +  K++Y+PL   +RF ALQS +ID+LSR T WT  R+ +L + F  ++++DGQGF+
Sbjct: 63  VLGNAEKVRYIPLTPGDRFNALQSGEIDVLSRITTWTHSRDTTLDIIFAGVSFYDGQGFM 122

Query: 131 MHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
           + +  GI S  +L GA+ICVQ GTTTE  LADYF+ H ++Y P+ F   +     ++A R
Sbjct: 123 VREDAGIRSPQELDGAAICVQKGTTTEQNLADYFREHGLRYQPVSFTSSDRAINGFKAGR 182

Query: 191 CDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           C A T D S LYA +   D PS   ILP +ISK PL PA+ Q D +WYNIV W  +A+V 
Sbjct: 183 CSAVTSDRSQLYAQRTKLDDPSSARILPTVISKEPLGPAVRQDDMQWYNIVKWCLFALVN 242

Query: 251 AEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMF 310
           AEELG+T  N++++ K +  P VQR LG++   + G A+GL  DW Y II  +GNY E++
Sbjct: 243 AEELGVTSANVDEMRK-SNKPVVQRLLGVNS--DTGRAMGLASDWGYNIISQVGNYQEIY 299

Query: 311 DRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
           D N+G  SEL+I RG N+LWSKGG+++APP+
Sbjct: 300 DGNVGKDSELEIDRGLNSLWSKGGILFAPPL 330


>gi|56751276|ref|YP_171977.1| polar amino acid transport system substrate-binding protein
           [Synechococcus elongatus PCC 6301]
 gi|81299057|ref|YP_399265.1| extracellular solute-binding protein [Synechococcus elongatus PCC
           7942]
 gi|56686235|dbj|BAD79457.1| polar amino acid transport system substrate-binding proetin
           [Synechococcus elongatus PCC 6301]
 gi|81167938|gb|ABB56278.1| extracellular solute-binding protein, family 3 [Synechococcus
           elongatus PCC 7942]
          Length = 359

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 140/334 (41%), Positives = 209/334 (62%), Gaps = 5/334 (1%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSA 70
                   + + + S L  ++ RG L CG+   L GF+ + + G++ G DVD C+A+++A
Sbjct: 29  AACRSLGGNETESNSRLNQVQARGKLLCGVEGRLPGFSFLDSQGNYSGLDVDICKAIAAA 88

Query: 71  IFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA--FRPITYFDGQG 128
           +F+DP  I+Y  L++ ERF AL S ++D+LSRNT WTL R+   G    F P T++DGQG
Sbjct: 89  LFNDPKAIEYRSLDSVERFPALASGEVDLLSRNTTWTLSRDAKGGNNLEFAPTTFYDGQG 148

Query: 129 FIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRA 188
            ++ +  GI S+    G SICV+ GTT+EL LAD  +   ++Y  I F   +   AAY  
Sbjct: 149 LMVRRNSGIQSLQDFQGKSICVETGTTSELNLADTMRELGVQYQEIKFPNSDANYAAYAQ 208

Query: 189 HRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
            RC+  T D S L A + T     +H +L  +ISK PL+PA +  D+ W+++V W   A 
Sbjct: 209 GRCEGVTSDRSQLAARRTTLSDADQHQLLDAVISKEPLSPATLNNDSPWFDVVKWVVNAT 268

Query: 249 VTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGE 308
           + AEE GITQ NI+Q  K + NP+++RFLG++    +G+ LGL+ D+ YR I+ +GNYGE
Sbjct: 269 IQAEEFGITQANIDQF-KTSKNPEIRRFLGLE--GELGQQLGLSNDFAYRAIKAVGNYGE 325

Query: 309 MFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +++RN+G QS LK+ RG N L+  GGL+Y+PP R
Sbjct: 326 IYERNVGQQSPLKLNRGLNQLYKNGGLLYSPPFR 359


>gi|163848771|ref|YP_001636815.1| extracellular solute-binding protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|163670060|gb|ABY36426.1| extracellular solute-binding protein family 3 [Chloroflexus
           aurantiacus J-10-fl]
          Length = 389

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 147/328 (44%), Positives = 219/328 (66%), Gaps = 4/328 (1%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
             T+       +  I  RG L CG+N   L GFA V + G ++GFD+DFCRA+++A+FDD
Sbjct: 65  GTTNQPAAGGQIERILSRGTLICGVNNNPLPGFASVDSAGVYRGFDIDFCRAVAAALFDD 124

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
           P+K+++ PL+A+ERF ALQS +ID+L RN+ WTL R+ +LGL + P T++DGQG ++ K 
Sbjct: 125 PTKVEFRPLSAQERFTALQSGEIDVLIRNSTWTLGRDGTLGLDWAPTTFYDGQGMMVRKD 184

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
            GI ++  + GA+ICVQ G+TTEL LAD F+A  + + P+VF   +   AAY A +CD +
Sbjct: 185 SGIETLEDMDGATICVQTGSTTELNLADQFRARGLTFTPVVFPDGDATRAAYDAGQCDGF 244

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
           T D S L +       P++H IL   +SK PL PA+ QGD +W++ V W  +A   AEE 
Sbjct: 245 TTDKSGLISSLTLLTNPADHKILDVTMSKEPLGPAVRQGDPQWFDAVRWIVFATFQAEEY 304

Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314
           GIT +N++Q    +  P+++RFLGI+    +G  +GL  D+  R++RH+GNY E+++RNL
Sbjct: 305 GITSQNLDQFL-GSDVPEIRRFLGIE--GELGAGIGLPNDFAARVVRHVGNYAEIYNRNL 361

Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342
           G  +   +PRG NAL+++GGL+Y+PP R
Sbjct: 362 GPDTPFNLPRGLNALYTEGGLLYSPPFR 389


>gi|197336291|ref|YP_002156345.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           fischeri MJ11]
 gi|197317781|gb|ACH67228.1| general L-amino acid-binding periplasmic protein AapJ [Vibrio
           fischeri MJ11]
          Length = 342

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 163/345 (47%), Positives = 231/345 (66%), Gaps = 6/345 (1%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M       F +I     L        +  L  ++K G+L+CG++TGL GF+   + G+W+
Sbjct: 1   MKFKTNTLFAAIATSAALLSAPALAASGTLEKVQKNGYLQCGVSTGLPGFSNPNSKGEWE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV+FC+A+++A+  D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL 
Sbjct: 61  GIDVEFCQAVAAAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLN 120

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F  + Y+DGQGF++ K+ G++S  +L GAS+CVQ+GTTTEL LADYF+ +NM+Y P+VF+
Sbjct: 121 FVGVNYYDGQGFMVKKELGLTSAKELDGASVCVQSGTTTELNLADYFRNNNMEYKPVVFD 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +    + A RCD  T D S LYAL+L    P    +LP+IISK PL P + QGD +W
Sbjct: 181 TAAQTSKGFDAGRCDVLTTDQSGLYALRLNLKDPKTAQVLPEIISKEPLGPVVRQGDDQW 240

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
           +NI  W   AM+ AEE  I+ KN +Q+ K + +P+++R LG+D     G+ LG+  DW Y
Sbjct: 241 FNINKWVLNAMINAEEYDISSKNADQMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGY 297

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++++ +GNYGE F+R +G  S L+I RG NALW+ GG MYA PIR
Sbjct: 298 QVVKQVGNYGESFERTVGEGSPLQISRGVNALWNAGGFMYAAPIR 342


>gi|110678761|ref|YP_681768.1| glutamate/glutamine/aspartate/asparagine-binding protein
           [Roseobacter denitrificans OCh 114]
 gi|109454877|gb|ABG31082.1| glutamate/glutamine/aspartate/asparagine-binding protein
           [Roseobacter denitrificans OCh 114]
          Length = 338

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 155/342 (45%), Positives = 221/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +    L I    + +  A  L D+K RG L CG+ TGLVGFA   A+G+W GFD
Sbjct: 1   MKKSVLLG--ALTIAGLAAGAAAAGTLDDVKARGTLNCGVTTGLVGFAAPNADGEWNGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VAVCRAVAAAVLGDATAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFTFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y+DGQGF++ K  G++S  +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+  E   
Sbjct: 119 INYYDGQGFMVPKSLGVTSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + + + PS+HV+LP+IISK PL P +  GD EW ++
Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRASFENPSDHVLLPEIISKEPLGPLVRHGDDEWGDV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A++TAEELG+T  N+++++  + NP+V+R LG +    +GE LGL  DW  R I
Sbjct: 239 VRWTLNALITAEELGVTSANVSEMATGSNNPEVKRLLGTE--GTLGEMLGLDADWAMRAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F +N+G  + + + RG NA W+ GGL+Y+PP R
Sbjct: 297 ASQGNYGEIFAKNIGEDTPIALSRGLNAQWTNGGLIYSPPFR 338


>gi|288959842|ref|YP_003450182.1| general L-amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
 gi|288912150|dbj|BAI73638.1| general L-amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
          Length = 356

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 143/335 (42%), Positives = 208/335 (62%), Gaps = 4/335 (1%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
           ++   I L  T  +     L  IK RG +K G+     GF    +NG W+GF VDF RAL
Sbjct: 26  ALSLAIGLALTGAAKAGPTLDAIKARGSIKVGV-GTQPGFFSPDSNGRWQGFFVDFGRAL 84

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           S A+F+DP K+Q++  + ++R  ALQS + DIL      T  R   LG  F P+ ++DGQ
Sbjct: 85  SIAVFNDPDKVQFVSSSPQQRLPALQSGEFDILLSGVTQTFTRATKLGFHFGPVVFYDGQ 144

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           G ++ KK G++    L+GA++CVQ GTT EL + D+F+ + + + P+V E   E   A+ 
Sbjct: 145 GLLVPKKLGVAKGKDLNGATVCVQTGTTGELNITDFFRQNKIAFKPVVIEETAENQKAFS 204

Query: 188 AHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYA 247
           + RCD  T D S L   +    +P ++V+LP+ ISK PLAPAI  GD +W  IV+W  YA
Sbjct: 205 SGRCDVLTQDASDLAITRTQLPKPDDYVLLPERISKEPLAPAIRYGDDQWLEIVNWAVYA 264

Query: 248 MVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYG 307
            + AEELGITQ NI+     + +P ++RFLG+D S  +GEA  L   + Y I++ +GNYG
Sbjct: 265 TIQAEELGITQANIDSFL-TSADPTIRRFLGVDPS--LGEAAKLDPKFAYTIVKTVGNYG 321

Query: 308 EMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           E+FDRN+G  +++ + RG+N LW++GGL+YAPP R
Sbjct: 322 EIFDRNVGPATKVGLDRGFNKLWTQGGLLYAPPFR 356


>gi|319957434|ref|YP_004168697.1| amino acid ABC transporter substrate-binding protein, paat family
           [Nitratifractor salsuginis DSM 16511]
 gi|319419838|gb|ADV46948.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Nitratifractor salsuginis DSM 16511]
          Length = 338

 Score =  338 bits (866), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 159/315 (50%), Positives = 225/315 (71%), Gaps = 2/315 (0%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            D+KK G LKCG+NTGL GF+E  + G W+G DVD+CRAL++ +  D SK++Y+PLNAKE
Sbjct: 26  DDVKKAGILKCGVNTGLPGFSEADSKGQWRGLDVDYCRALAAVVLGDASKVKYVPLNAKE 85

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           RF ALQS +ID+LSRNT  T  R+ SLG+ F  + Y+DGQGF++ K  G+ S  +L GA+
Sbjct: 86  RFTALQSGEIDVLSRNTTNTETRDTSLGINFTGVMYYDGQGFMVPKSLGVKSAKELDGAT 145

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +C+QAGTTTEL LADYF+A++MK+  I F+  +++  A+ A RCD  T D S LYA +  
Sbjct: 146 VCIQAGTTTELNLADYFRANHMKFKAITFDTNDQVTKAFEAGRCDVLTTDASGLYATRTK 205

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
              P ++V+LP+IISK PLAPA+  GD +W++I  WT  A++TAEE GIT  N+++    
Sbjct: 206 LANPEKYVVLPEIISKEPLAPAVRHGDDQWFDIAKWTRNALLTAEEKGITMANVDEAKAK 265

Query: 268 TTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYN 327
           +T+P+V+R L ++    + + L L K   Y  I+ +GNYGE+F+RN+G ++ LKI RG N
Sbjct: 266 STDPEVKRLLSVE--GKMCDNLKLEKGCFYNAIKQVGNYGEIFERNVGVKTPLKIQRGLN 323

Query: 328 ALWSKGGLMYAPPIR 342
           ALW++GGL Y+PP R
Sbjct: 324 ALWTQGGLQYSPPFR 338


>gi|15641374|ref|NP_231006.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121587999|ref|ZP_01677751.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 2740-80]
 gi|121728530|ref|ZP_01681553.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae V52]
 gi|153212726|ref|ZP_01948383.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 1587]
 gi|153819348|ref|ZP_01972015.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae NCTC 8457]
 gi|153821335|ref|ZP_01974002.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae B33]
 gi|153825294|ref|ZP_01977961.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae MZO-2]
 gi|153828770|ref|ZP_01981437.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 623-39]
 gi|183179360|ref|ZP_02957571.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae MZO-3]
 gi|227081533|ref|YP_002810084.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae M66-2]
 gi|229505057|ref|ZP_04394567.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae BX 330286]
 gi|229511273|ref|ZP_04400752.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae B33]
 gi|229515734|ref|ZP_04405193.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae TMA 21]
 gi|229518391|ref|ZP_04407835.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae RC9]
 gi|229521468|ref|ZP_04410887.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae TM 11079-80]
 gi|229529562|ref|ZP_04418952.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae 12129(1)]
 gi|229608061|ref|YP_002878709.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae MJ-1236]
 gi|254225346|ref|ZP_04918958.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae V51]
 gi|254286186|ref|ZP_04961146.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae AM-19226]
 gi|254848484|ref|ZP_05237834.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255745749|ref|ZP_05419697.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholera CIRS 101]
 gi|262158973|ref|ZP_06030085.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae INDRE 91/1]
 gi|262192389|ref|ZP_06050542.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae CT 5369-93]
 gi|297578947|ref|ZP_06940875.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|298498554|ref|ZP_07008361.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|9655856|gb|AAF94520.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121547740|gb|EAX57831.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 2740-80]
 gi|121629194|gb|EAX61634.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae V52]
 gi|124116376|gb|EAY35196.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 1587]
 gi|125622187|gb|EAZ50509.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae V51]
 gi|126510093|gb|EAZ72687.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae NCTC 8457]
 gi|126521153|gb|EAZ78376.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae B33]
 gi|148875723|gb|EDL73858.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae 623-39]
 gi|149741122|gb|EDM55181.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae MZO-2]
 gi|150423855|gb|EDN15796.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae AM-19226]
 gi|183012771|gb|EDT88071.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae MZO-3]
 gi|227009421|gb|ACP05633.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae M66-2]
 gi|229333336|gb|EEN98822.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae 12129(1)]
 gi|229341566|gb|EEO06569.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae TM 11079-80]
 gi|229345106|gb|EEO10080.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae RC9]
 gi|229347503|gb|EEO12463.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae TMA 21]
 gi|229351238|gb|EEO16179.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae B33]
 gi|229357280|gb|EEO22197.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae BX 330286]
 gi|229370716|gb|ACQ61139.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae MJ-1236]
 gi|254844189|gb|EET22603.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255736824|gb|EET92221.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholera CIRS 101]
 gi|262029158|gb|EEY47810.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae INDRE 91/1]
 gi|262031742|gb|EEY50327.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae CT 5369-93]
 gi|297536541|gb|EFH75374.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|297542887|gb|EFH78937.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|327484032|gb|AEA78439.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Vibrio cholerae LMA3894-4]
          Length = 342

 Score =  338 bits (866), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 163/318 (51%), Positives = 227/318 (71%), Gaps = 3/318 (0%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  +  +GF+ CG++TGL GF+   A G+W+G DV++C+A+++A+  D +K++++PL 
Sbjct: 28  STLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEYCQAMAAAVLGDKTKVKFVPLT 87

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           AKERF ALQS +ID+LSRNT WTL R+ +LGL F  + Y+DGQGF++ K  G+ S  +L+
Sbjct: 88  AKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKDLGVKSAKELN 147

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   +    + A RCD  T D S LYAL
Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +L  ++P   V+LP+IISK PL P + Q D +W+N+  W  YAMV AEE GIT KN++++
Sbjct: 208 RLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAMVNAEEYGITSKNVDEM 267

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
            K + NP+V+R LG+D     G  LG+  DW+Y+I++ +GNYGE FDR +G+ S LKI R
Sbjct: 268 MK-SDNPEVKRILGLDGPKGTG--LGIRDDWSYQIVKQVGNYGESFDRTVGSGSPLKIDR 324

Query: 325 GYNALWSKGGLMYAPPIR 342
           G NALW+ GG MYAPPIR
Sbjct: 325 GVNALWNAGGFMYAPPIR 342


>gi|154253424|ref|YP_001414248.1| extracellular solute-binding protein [Parvibaculum lavamentivorans
           DS-1]
 gi|154157374|gb|ABS64591.1| extracellular solute-binding protein family 3 [Parvibaculum
           lavamentivorans DS-1]
          Length = 367

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 156/321 (48%), Positives = 215/321 (66%), Gaps = 3/321 (0%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
                L  +++RGF++CG++ GL GF+     G W G DVDFCRA+++AIF +P ++++ 
Sbjct: 50  AAGDTLRRVRQRGFIQCGVSQGLPGFSNPDERGRWSGIDVDFCRAIAAAIFGNPDQVRFR 109

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           PL+AK+RF ALQS +IDILSRNT WT+ R+  LG  F  +TY+DGQ F++ K  GI + +
Sbjct: 110 PLSAKDRFTALQSGEIDILSRNTTWTMSRDTQLGFNFVGVTYYDGQSFMVRKAAGIKTTA 169

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+GA+IC + GTTTEL LADYF++  + Y  + FE+ +E   AY   RCDAYT D S L
Sbjct: 170 DLAGATICTETGTTTELNLADYFRSRGLSYRVLSFEKNDEAIVAYDRGRCDAYTTDASGL 229

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
           YA +L    P  + IL +IISK PL PA+ QGD +W +I  WT  A++ AEE GIT  NI
Sbjct: 230 YATRLKLADPDANTILSEIISKEPLGPAVRQGDPQWEDIARWTLNALLEAEEFGITSANI 289

Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
           N++ + + NP V+R LG +     G ++GL  +W    IR +GNYGEMF+RN+G  + L 
Sbjct: 290 NEMLE-SDNPRVKRLLGRE--GAYGGSVGLDANWAANAIRAVGNYGEMFERNVGKNTPLG 346

Query: 322 IPRGYNALWSKGGLMYAPPIR 342
           I RG NA W+ GGL YAPP+R
Sbjct: 347 IERGLNAQWTDGGLQYAPPVR 367


>gi|258621541|ref|ZP_05716574.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio mimicus VM573]
 gi|258627556|ref|ZP_05722333.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio mimicus VM603]
 gi|262171608|ref|ZP_06039286.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           mimicus MB-451]
 gi|258580138|gb|EEW05110.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio mimicus VM603]
 gi|258586159|gb|EEW10875.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio mimicus VM573]
 gi|261892684|gb|EEY38670.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           mimicus MB-451]
          Length = 342

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 164/318 (51%), Positives = 227/318 (71%), Gaps = 3/318 (0%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  +  +GF+ CG++TGL GF+   A GDW+G DV++C+AL++A+  D +K++++PL 
Sbjct: 28  STLDKVLAQGFITCGVSTGLPGFSNPNAKGDWEGIDVEYCQALAAAVLGDKTKVKFVPLT 87

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           AKERF ALQS +ID+LSRNT WTL R+ +LGL F  + Y+DGQGF++ K  GI S  +L 
Sbjct: 88  AKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKDLGIKSAKELD 147

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           GAS+CVQ+GTTTEL LADYF+   MKY P+VF+   +    + A RCD  T D S LYAL
Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMKYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +L  ++P   ++LP+IISK PL P + Q D +W+N+  W  YAMV AEE GIT KN++++
Sbjct: 208 RLNLEKPDSALVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAMVNAEEYGITSKNVDEM 267

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
            K + NP+V+R LG+D     G  LG+  DW+Y+I++ +GNYGE F+R +G+ S L+I R
Sbjct: 268 MK-SDNPEVKRILGLDGPKGTG--LGIRDDWSYQIVKQVGNYGESFERTVGSGSPLQIDR 324

Query: 325 GYNALWSKGGLMYAPPIR 342
           G NALW+ GG MYAPPIR
Sbjct: 325 GVNALWNAGGFMYAPPIR 342


>gi|171058819|ref|YP_001791168.1| extracellular solute-binding protein [Leptothrix cholodnii SP-6]
 gi|170776264|gb|ACB34403.1| extracellular solute-binding protein family 3 [Leptothrix cholodnii
           SP-6]
          Length = 339

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 144/320 (45%), Positives = 219/320 (68%), Gaps = 3/320 (0%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
              L  IK+R  +  G++TG+ GF+   + G W G DVD  RA+++A+  D  K++++PL
Sbjct: 22  GKTLDTIKQRDQILVGVSTGVAGFSAADSQGKWTGLDVDVGRAIAAAVLGDADKVKWVPL 81

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
            + +RF A+QS ++D+LSRNT +TL R+ SLGL    + ++DGQGF++  K  + S  QL
Sbjct: 82  ASPQRFTAIQSGEVDVLSRNTTFTLTRDASLGLHQTAVVFYDGQGFMVPAKTKVKSAKQL 141

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            GA++CVQ+GTTTE  L D+ +A+ +   P+VF++++  +AAY + RC AYT D S L +
Sbjct: 142 KGATVCVQSGTTTEKNLTDFSRANKLNLKPVVFDKLDAANAAYFSGRCQAYTTDASGLAS 201

Query: 204 LKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           ++      P +HVILP++ISK PL P + +GD EW+ IV W  Y ++ AEE GITQ N++
Sbjct: 202 IRSKEAKDPKDHVILPELISKEPLGPLVRRGDDEWFAIVKWVVYGLIEAEESGITQANVD 261

Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322
           Q+  D+T+P VQR LG  K+ + G+ LGL ++W  R I+ +GNYGE+++RN+G ++ + +
Sbjct: 262 QLKADSTDPVVQRLLG--KTEDTGKLLGLDREWLARAIKAVGNYGEIYERNVGEKTPVGL 319

Query: 323 PRGYNALWSKGGLMYAPPIR 342
           PRG NALW+ GGL YA PIR
Sbjct: 320 PRGKNALWTNGGLQYAMPIR 339


>gi|84515667|ref|ZP_01003028.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Loktanella
           vestfoldensis SKA53]
 gi|84510109|gb|EAQ06565.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Loktanella
           vestfoldensis SKA53]
          Length = 339

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 151/343 (44%), Positives = 220/343 (64%), Gaps = 5/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+  L +  L  T+   +A+ L D+K RG LKCG N GL GFA   ANG+W+GFD
Sbjct: 1   MTKTVFIGALAVAGL--TAGIASAATLDDVKARGSLKCGSNEGLAGFAAPDANGNWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D   ++++PL ++ RF AL + ++D+L RN+ WT  R+  L L F  
Sbjct: 59  VSLCRAIAAAVLGDGQAVEFVPLTSQTRFTALAAGEVDVLVRNSTWTFTRDTDLALDFPA 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y+DGQGF++ +  G+SS ++L GA++C+Q GTTTEL LADYF+A+ + Y P+      
Sbjct: 119 INYYDGQGFMVPRALGVSSAAELDGATVCIQTGTTTELNLADYFRANGISYEPVPVATNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT DIS L A + T + P +HVILP+++SK PL PA+  GD  W +I
Sbjct: 179 EGQQQYLAGACDVYTTDISGLAATRATFEAPGDHVILPEVVSKEPLGPAVRHGDNAWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTN-PDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           V WT +A+V AEE G+T+ N+ +++   T+ P+V R LG +    +G  +GL  DW  ++
Sbjct: 239 VRWTTHALVAAEEYGVTKANVAELAAAPTDNPEVNRLLGTE--GELGAMIGLDADWAVKV 296

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +   GNYGE+F+ N+G  + + + RG NA W+ GGLMY  P R
Sbjct: 297 LSVAGNYGEIFEANIGESTAVGLARGLNAQWTDGGLMYGGPFR 339


>gi|298491367|ref|YP_003721544.1| family 1 extracellular solute-binding protein ['Nostoc azollae'
           0708]
 gi|298233285|gb|ADI64421.1| extracellular solute-binding protein family 3 ['Nostoc azollae'
           0708]
          Length = 355

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 153/358 (42%), Positives = 224/358 (62%), Gaps = 19/358 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASIL----------------GDIKKRGFLKCGINTGL 44
           M K  F+     +     + S  +                     +K RG L CG++  L
Sbjct: 1   MLKSAFILASAPLFFTLAACSGESGTQVNTASAPATQVSRNIGSTVKNRGKLICGVSGEL 60

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
            GF+ V  +  + G DVD CRA+++A+FD+P  +++  LN KERF ALQ+ +ID+LSRNT
Sbjct: 61  PGFSFVGTDAKYSGIDVDVCRAVTAALFDNPDAVEFRNLNTKERFTALQTGEIDLLSRNT 120

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
            WT+ RE S+GL F P+ ++DGQ  ++ K  GI S++ L   +IC Q GTTTE  LAD  
Sbjct: 121 TWTMSRETSVGLQFAPVIFYDGQAIMVSKNSGIKSLADLKNKAICTQTGTTTEQNLADQM 180

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           +  ++ Y P+VFE V    A Y   RCD  T D SAL + + T  +P +++IL +++S  
Sbjct: 181 RKRSITYKPVVFEDVNITFATYAEGRCDGVTTDRSALISRRTTLPKPEDNIILDELLSSE 240

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284
           PLAPA+ +GD +W +IV W  Y++V AEELGI  +NI Q+  ++ +PD++RFLG +   N
Sbjct: 241 PLAPAVAKGDPQWNDIVKWVVYSLVKAEELGINSQNIAQL-TNSNDPDIKRFLGTE--GN 297

Query: 285 IGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GE LGLT D+  RI++H+GNYGE++DRNLG +++L +PRG N L  KGGL+Y+PP R
Sbjct: 298 LGEGLGLTNDFAARIVKHVGNYGEVYDRNLGGKTKLNLPRGQNQLAIKGGLLYSPPFR 355


>gi|219847287|ref|YP_002461720.1| extracellular solute-binding protein family 3 protein [Chloroflexus
           aggregans DSM 9485]
 gi|219541546|gb|ACL23284.1| extracellular solute-binding protein family 3 [Chloroflexus
           aggregans DSM 9485]
          Length = 389

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 149/328 (45%), Positives = 220/328 (67%), Gaps = 4/328 (1%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTG-LVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
             T+   +  ++  I  RG L CG+N   L GFA V A+G + GFD+DFCRA+++A+FDD
Sbjct: 65  GTTNQPASGGLIQQILARGRLICGVNNNPLPGFASVDASGVYSGFDIDFCRAVAAALFDD 124

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
           P+K+ + PL+A+ERF ALQ+ +ID+L RN+ WTL R+ +LGL + P T++DGQG ++ K 
Sbjct: 125 PTKVDFRPLSAQERFTALQTGEIDVLIRNSTWTLGRDGNLGLDWAPTTFYDGQGMMVRKD 184

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
            GI+++  + GA+ICVQ GTTTEL LAD F+A  + + P+VF   +   AAY A +CD +
Sbjct: 185 SGINTLEDMDGATICVQTGTTTELNLADQFRARGLTFTPVVFPDGDSTRAAYDAGQCDGF 244

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
           T D S L +       P++H IL   +SK PL PA+ QGD +W++ V W  +A   AEE 
Sbjct: 245 TTDKSGLISSLTLLSNPADHKILEVTMSKEPLGPAVKQGDPQWFDAVRWIVFATFQAEEY 304

Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314
           GIT +N+N    ++  P+++RFLGI+   ++   +GL  D+  RIIRH+GNY E+++RNL
Sbjct: 305 GITSQNVNDFL-NSDVPEIRRFLGIE--GDLAAGIGLPNDFAVRIIRHVGNYAEIYNRNL 361

Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342
           G  +   +PRG NAL++ GGL+Y+PP R
Sbjct: 362 GPDTPFNLPRGLNALYTDGGLLYSPPFR 389


>gi|309791172|ref|ZP_07685704.1| extracellular solute-binding protein family 3 [Oscillochloris
           trichoides DG6]
 gi|308226734|gb|EFO80430.1| extracellular solute-binding protein family 3 [Oscillochloris
           trichoides DG6]
          Length = 380

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 147/319 (46%), Positives = 220/319 (68%), Gaps = 3/319 (0%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
              +  I  RG L CG+N+ L GF  V + G++ GFDV+FCRA+++A+FDDP+K+++ PL
Sbjct: 65  GGRIQTIISRGNLICGVNSVLPGFGNVDSTGNFSGFDVEFCRAIAAALFDDPTKVEFRPL 124

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           NA+ERF ALQS ++D+LSRNT  TL R+ S+GL F P+T++DGQG ++ K  GI S+  +
Sbjct: 125 NAQERFTALQSGEVDVLSRNTTATLTRDGSVGLDFAPVTFYDGQGMMVRKDSGIESLEDM 184

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            GA ICVQ+GTTTEL LAD F++ N+ +  ++F+  +    AY + +CD +T D S L +
Sbjct: 185 EGARICVQSGTTTELNLADQFRSRNINFEAVIFQEADPTFQAYDSGQCDGFTTDKSGLVS 244

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
            +     P +H+IL   +SK PLAPA++QGD +W + V W  YA + AEELGIT  NI  
Sbjct: 245 YQTKATNPDDHMILDVTMSKEPLAPAVLQGDAQWADAVRWVVYATIEAEELGITSANIGD 304

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323
            +  T +P+++RFLG++    +G  +GL  D+  R+I+H+GNY E+++RNLG  +   +P
Sbjct: 305 FAA-TEDPNIRRFLGVE--GELGAGIGLPNDFAARVIKHVGNYQEIYNRNLGPDTPFNLP 361

Query: 324 RGYNALWSKGGLMYAPPIR 342
           RG N L+++GGL+Y+PP R
Sbjct: 362 RGLNTLYTEGGLLYSPPFR 380


>gi|119946447|ref|YP_944127.1| ABC amino acid transporter extracellular solute-binding protein,
           family 3 [Psychromonas ingrahamii 37]
 gi|119865051|gb|ABM04528.1| ABC amino acid transporter extracellular solute-binding protein,
           family 3 [Psychromonas ingrahamii 37]
          Length = 337

 Score =  337 bits (864), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 164/321 (51%), Positives = 229/321 (71%), Gaps = 3/321 (0%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            +AS L ++ K+G + CGI+TG+ GF+   + G W+G DVDFC+++++A+F D SK++Y+
Sbjct: 20  ASASTLEEVVKKGDINCGISTGIAGFSSTDSKGVWEGLDVDFCKSVAAAVFGDASKVKYI 79

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           PL AKERF ALQS +ID+LSR T WT  R+ SLGL F  + Y+DGQGF+++KK GISS  
Sbjct: 80  PLTAKERFTALQSGEIDVLSRATTWTATRDTSLGLNFAGVNYYDGQGFLVNKKLGISSAK 139

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           +LSGA+ C+QAGTT+EL L DYF+++NM+Y  + ++   +    +++ RCD  T D S L
Sbjct: 140 ELSGATFCIQAGTTSELNLTDYFQSNNMEYRAVTYDTSGQTVNGFKSGRCDVITSDASQL 199

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
           Y LKL  D P   ++LP+IISK PL P + QGD EW+NIV WT +A + AEELG++  N+
Sbjct: 200 YGLKLKLDDPDSAIVLPEIISKEPLGPVVRQGDDEWFNIVRWTMFATLEAEELGVSSANV 259

Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
           + + K + NP + R LG  KS   GE LGL  DW Y+I++ +GNYGEMFD+N+G  S L 
Sbjct: 260 DAMLK-SENPSIMRLLG--KSGTAGENLGLKGDWVYQIVKQVGNYGEMFDKNVGKDSPLN 316

Query: 322 IPRGYNALWSKGGLMYAPPIR 342
           I RG N LW++GGLMY+ PIR
Sbjct: 317 IDRGLNKLWNQGGLMYSMPIR 337


>gi|261210913|ref|ZP_05925203.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           RC341]
 gi|260839888|gb|EEX66488.1| amino acid ABC transporter amino acid-binding protein [Vibrio sp.
           RC341]
          Length = 342

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 165/318 (51%), Positives = 227/318 (71%), Gaps = 3/318 (0%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  +  +GF+ CG++TGL GF+   A GDW+G DV++C+AL++A+  D +K++++PL 
Sbjct: 28  STLDKVLSQGFITCGVSTGLPGFSNPNAKGDWEGIDVEYCQALAAAVLGDKTKVKFVPLT 87

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           AKERF ALQS +ID+LSRNT WTL R+ +LGL F  + Y+DGQGF++ K  G+ S  +L 
Sbjct: 88  AKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKDLGVKSAKELD 147

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           GAS+CVQ+GTTTEL LADYF+   MKY P+VF+   +    + A RCD  T D S LYAL
Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMKYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +L  ++P   V+LP+IISK PL P + Q D +W+N+  WT YAMV AEE GIT KN++++
Sbjct: 208 RLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWTLYAMVNAEEYGITSKNVDEM 267

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
            K + NP+V+R LG+D     G  LG+  DW+Y+I++ +GNYGE F+R +G  S L+I R
Sbjct: 268 MK-SENPEVKRILGLDGPKGTG--LGIRDDWSYQIVKQVGNYGESFERTVGKGSPLQIDR 324

Query: 325 GYNALWSKGGLMYAPPIR 342
           G NALW+ GG MYAPPIR
Sbjct: 325 GVNALWNAGGFMYAPPIR 342


>gi|218246879|ref|YP_002372250.1| family 3 extracellular solute-binding protein [Cyanothece sp. PCC
           8801]
 gi|257059921|ref|YP_003137809.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           8802]
 gi|218167357|gb|ACK66094.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           8801]
 gi|256590087|gb|ACV00974.1| extracellular solute-binding protein family 3 [Cyanothece sp. PCC
           8802]
          Length = 363

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 145/326 (44%), Positives = 216/326 (66%), Gaps = 6/326 (1%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           +S   + S L  IK+RG L CG+N  + GF+ V   G + G DVD CRA+++A+FDDPSK
Sbjct: 43  SSSKVSGSRLATIKERGTLICGVNGEVPGFSFVDEQGQYSGLDVDMCRAIAAALFDDPSK 102

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++Y  L+A+ER  A+QS ++D+L+RNT WT+ R+ ++G+ F P  ++DGQG +  K  G 
Sbjct: 103 VEYRKLSAQERLTAVQSGEVDVLNRNTTWTMSRDTAVGMEFAPTVFYDGQGIMATKASGA 162

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHN-MKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           +++  L+G SICV AGTTTE  LAD  +      Y+P+V + V+ + AAY+  RC+A T 
Sbjct: 163 NTLKDLTGKSICVLAGTTTEQNLADQMRKEGVTDYNPVVSDDVDALYAAYQEGRCEAVTS 222

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           D S L A +    +  +HVIL  ++SK PL P +  GD+ WY+ V W  +A++ AEE GI
Sbjct: 223 DRSQLVARRSIFPKKDDHVILDVVMSKEPLGPVVADGDSTWYDAVKWITFAVIQAEEFGI 282

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
           T +N+    + T +P+++RFLGID    +GE +GL  D+  RII+H+GNYGE+++RN+G 
Sbjct: 283 TSQNLATF-ESTEDPNIKRFLGIDD--KLGEDMGLPNDFAARIIKHVGNYGEIYERNIGK 339

Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342
              L + RG N LW+ GGL+Y+PP R
Sbjct: 340 --PLGLERGQNQLWTNGGLLYSPPFR 363


>gi|33594953|ref|NP_882596.1| amino acid-binding periplasmic protein [Bordetella parapertussis
           12822]
 gi|33565029|emb|CAE39978.1| amino acid-binding periplasmic protein [Bordetella parapertussis]
          Length = 338

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 148/324 (45%), Positives = 216/324 (66%), Gaps = 4/324 (1%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
                + L  +KKRG + CG  TG  GF+     G W+G DVD CRA+++A+F D SKI+
Sbjct: 18  AGAQGATLDVVKKRGTVVCGTTTGFAGFSAPDKQGTWRGLDVDLCRAVAAAVFGDASKIK 77

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +PLN+++RF ALQS ++D+L+RNT  T  R+ +LG+    I ++DGQGF++ K  G+ S
Sbjct: 78  VVPLNSQQRFTALQSGEVDVLTRNTTVTQQRDTALGIIHAGINFYDGQGFMVPKSLGVKS 137

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
             +L+GA+IC+Q GT+ E TLAD+ +A+ + Y P+V E   E+  A+ + RCD ++ D S
Sbjct: 138 AKELNGATICLQTGTSNENTLADWARANQVSYKPVVIETFNEVVNAFASGRCDVFSTDAS 197

Query: 200 ALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
            L +++    ++P ++V+LP+IISK PL P + QGD  W NIV W+  AM+ AEE G+T 
Sbjct: 198 GLASIRISRLEKPDDYVVLPEIISKEPLGPFVRQGDDAWLNIVRWSLSAMIEAEEYGVTT 257

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
            N+++  K + NP+V+R LG+  +   G  LGL + W Y II+ +GNYGE F+RN+G  S
Sbjct: 258 ANVDEQLK-SENPNVRRILGV--TPGAGANLGLDEKWAYNIIKQVGNYGESFERNVGQGS 314

Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342
            LKI RG NA W +GGLMYA PIR
Sbjct: 315 PLKIQRGLNAQWIQGGLMYALPIR 338


>gi|148980390|ref|ZP_01816033.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrionales bacterium SWAT-3]
 gi|145961262|gb|EDK26574.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrionales bacterium SWAT-3]
          Length = 342

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 159/318 (50%), Positives = 223/318 (70%), Gaps = 3/318 (0%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  +  +GFL CG++TGL GF+   + G+W+G DV++C+AL++A+  D +K++Y+PL 
Sbjct: 28  STLDKVTSQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEYCQALAAAVLGDKTKVKYVPLT 87

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           AKERF ALQS +ID+LSRNT WTL R+ +LGL F  + Y+DGQGF++ K  G++S  +L 
Sbjct: 88  AKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMVKKDLGLTSALELD 147

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           GAS+CVQ+GTTTEL LADYF+ + M Y P+VF+   +    + A RCD  T D S LYAL
Sbjct: 148 GASVCVQSGTTTELNLADYFRNNGMSYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +L    P    +LP+IISK PL P + Q D +W+N+  WT  AMV AEE GI+ KN +++
Sbjct: 208 RLNLADPKSAQVLPEIISKEPLGPVVRQDDDKWFNVAKWTLSAMVNAEEYGISSKNADEM 267

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
            K + +P+++R LG+D     G+ LG+  DW Y++I+ +GNYGE F+R +G  S L+I R
Sbjct: 268 LK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVIKQVGNYGESFERTVGTGSPLQIDR 324

Query: 325 GYNALWSKGGLMYAPPIR 342
           G NALW+ GG MYAPPIR
Sbjct: 325 GVNALWNAGGFMYAPPIR 342


>gi|153011796|ref|YP_001373009.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151563684|gb|ABS17180.1| extracellular solute-binding protein family 3 [Ochrobactrum
           anthropi ATCC 49188]
          Length = 335

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 153/318 (48%), Positives = 224/318 (70%), Gaps = 3/318 (0%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             +  IK+RG ++CG++ G++GF+    NG W GFDVDFCRA+++A   +P K+ Y+PL+
Sbjct: 21  GTVDVIKERGEVRCGVSQGVLGFSVPDKNGVWGGFDVDFCRAVAAATLGNPDKVAYVPLS 80

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
            K+RF ALQS ++D+LSR T WTL R+  LG++F  + Y+DGQ F+++K+ G+ SV ++S
Sbjct: 81  TKDRFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVGVNYYDGQAFMVNKEVGVKSVKEIS 140

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           GAS+C + GTTTE  +ADYF A+ ++Y  I FE+ ++   A+   RCD Y+ D SALYA 
Sbjct: 141 GASVCTETGTTTEQNMADYFSANKIEYQVIAFEKPDQTIQAFNTGRCDVYSTDASALYAQ 200

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +LT + P   V+LP++ISK PL PA+ QGD +W+ IV WT +A++ AEE+GIT++N   +
Sbjct: 201 RLTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKIVRWTLFALIEAEEMGITKENAASL 260

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
            + +     +RFLG++  +  G+A+GL   W Y+ I  +GNYGE+F+R+LG  S LKI R
Sbjct: 261 LE-SGTVAQKRFLGVESEA--GKAMGLDAKWAYQAISAVGNYGEIFERHLGKDSPLKIDR 317

Query: 325 GYNALWSKGGLMYAPPIR 342
           G N LWS GGLMYAPP R
Sbjct: 318 GLNRLWSDGGLMYAPPAR 335


>gi|260432480|ref|ZP_05786451.1| glutamate/glutamine/aspartate/asparagine-binding protein
           bztAprecursor [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416308|gb|EEX09567.1| glutamate/glutamine/aspartate/asparagine-binding protein
           bztAprecursor [Silicibacter lacuscaerulensis ITI-1157]
          Length = 356

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 153/342 (44%), Positives = 220/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +    I    + +  A  + D+K RG L CG+ TGLVGFA   ANG+W+GFD
Sbjct: 19  MKKSVI--LGAATIAGLAAGAAAAGTVDDVKARGKLNCGVTTGLVGFAAPDANGEWQGFD 76

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S ++D+L+RNT WT  R++ L   F  
Sbjct: 77  VAVCRAVAAAVLGDANAVEFVPTTGKTRFTALASGEVDMLARNTTWTFSRDVDLKFDFVG 136

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS  +L GA++C+Q GTTTEL LAD+F+++N+ Y P+  E   
Sbjct: 137 VNYYDGQGFMVPKALGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 196

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T + P +HV+LP+IISK PL P +  GD EW ++
Sbjct: 197 EAQQQYLAGACDVYTTDASGLAATRATFENPGDHVLLPEIISKEPLGPLVRHGDNEWGDV 256

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A++TAEELGIT  NI++++  T NP++ R LG +    +GE LGL   W  R I
Sbjct: 257 VRWTLNALITAEELGITSANIDEMASGTENPEINRLLGSE--GTLGEMLGLDAQWALRAI 314

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +  GNYGE+F +N+G ++ + + RG NA W+ GGL+Y+PP R
Sbjct: 315 KAGGNYGEVFAKNIGEETPIGLARGLNAQWTDGGLLYSPPFR 356


>gi|167041376|gb|ABZ06129.1| putative bacterial extracellular solute-binding protein, family 3
           [uncultured marine microorganism HF4000_005K23]
          Length = 348

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 148/350 (42%), Positives = 217/350 (62%), Gaps = 12/350 (3%)

Query: 1   MYKDF--FVSILCLIILFFT-----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M + F   +S++ ++ + F        +  +  L +  K+  LKCG++ GL GF+ + A 
Sbjct: 3   MKRTFKHLLSLIAVVAVLFALGTEAMAAKKSKTLKNTIKKDTLKCGVSQGLPGFSNMDAA 62

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+W G DVD CRA+++A+  D  K+ ++ L+AKERF AL + +IDILSRNT WTL R+  
Sbjct: 63  GNWTGVDVDVCRAVAAAVLGDSGKVTFIALSAKERFTALIAGEIDILSRNTTWTLSRDAD 122

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYH 172
           +GL F  + ++DGQGF++ K  GI+S +    G S CV  GTTTEL + D+F +  + Y 
Sbjct: 123 IGLTFVGVNFYDGQGFMVRKDSGITSTNDFKSGLSACVNIGTTTELNMRDFFTSKGITYE 182

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           P+VFE+ +E+  AY A RCD YT D S L A +     P +H++LP+ ISK PL P + Q
Sbjct: 183 PVVFEKADEVKDAYDAGRCDTYTTDKSGLAAQRTKLANPDDHIVLPETISKEPLGPVVRQ 242

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
           GD  W +IV W+   M+ AEE GI   N + + K + NP ++R +G +    +G ALGL 
Sbjct: 243 GDAVWEDIVRWSLNVMIEAEEYGINSANADSM-KTSKNPQIKRLVGAE--GELGAALGLD 299

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            DW+ RII+ +GNYGE + RN+   + +   RG N LW+KGGL+Y PP R
Sbjct: 300 NDWSLRIIKQVGNYGESYKRNI-ADTGILPTRGPNELWTKGGLLYVPPAR 348


>gi|84394265|ref|ZP_00992991.1| ABC-type amino acid transport, signal transduction system,
           periplasmic component/domain [Vibrio splendidus 12B01]
 gi|86148624|ref|ZP_01066906.1| ABC-type amino acid transport, signal transduction
           systems,periplasmic component/domain [Vibrio sp. MED222]
 gi|218709394|ref|YP_002417015.1| amino acid ABC transporter [Vibrio splendidus LGP32]
 gi|84375104|gb|EAP92025.1| ABC-type amino acid transport, signal transduction system,
           periplasmic component/domain [Vibrio splendidus 12B01]
 gi|85833580|gb|EAQ51756.1| ABC-type amino acid transport, signal transduction
           systems,periplasmic component/domain [Vibrio sp. MED222]
 gi|218322413|emb|CAV18566.1| Amino acid ABC transporter [Vibrio splendidus LGP32]
          Length = 342

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 158/318 (49%), Positives = 223/318 (70%), Gaps = 3/318 (0%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  +  +GFL CG++TGL GF+   + G+W+G DV++C+AL++A+  D +K++Y+PL 
Sbjct: 28  STLDKVTSQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEYCQALAAAVLGDKTKVKYVPLT 87

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           AKERF ALQS +ID+LSRNT WTL R+ +LGL F  + Y+DGQGF++ K+ G++S  +L 
Sbjct: 88  AKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMVKKELGLTSAQELD 147

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   +    + A RCD  T D S LYAL
Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMSYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +L    P    +LP+IISK PL P + Q D +W+N+  WT  AM+ AEE GI+ KN +++
Sbjct: 208 RLNLADPKSAQVLPEIISKEPLGPVVRQDDDKWFNVAKWTLSAMINAEEYGISSKNADEM 267

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
            K + +P+++R LG+D     G+ LG+  DW Y++I+ +GNYGE F+R +G  S L+I R
Sbjct: 268 LK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVIKQVGNYGESFERTVGTGSPLQISR 324

Query: 325 GYNALWSKGGLMYAPPIR 342
           G NALW+ GG MYAPPIR
Sbjct: 325 GVNALWNAGGFMYAPPIR 342


>gi|304391889|ref|ZP_07373831.1| general L-amino acid-binding periplasmic protein AapJ [Ahrensia sp.
           R2A130]
 gi|303296118|gb|EFL90476.1| general L-amino acid-binding periplasmic protein AapJ [Ahrensia sp.
           R2A130]
          Length = 342

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 217/343 (63%), Gaps = 2/343 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M        L    +  T    +A+ L D+K +GFL+CG++TG  GFA     G+W+GFD
Sbjct: 1   MKTKLLSLALGAAAIAMTGTVASAATLDDVKAKGFLQCGVSTGFPGFAFTDDAGNWQGFD 60

Query: 61  VDFCRALSSAIF-DDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
              CRA+++AIF  D + +++ P   K RF AL S ++D+L+RNT  T  R++ L   F 
Sbjct: 61  PALCRAMAAAIFAGDSNAVKFTPTTGKTRFTALASGEVDVLARNTTETFSRDVDLKFTFG 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
           P+ Y+DGQGF++ K  G++S   LSGA+ICVQ GTTTEL LADYF+A+NM Y P+  E  
Sbjct: 121 PVNYYDGQGFMVRKSLGVTSALNLSGATICVQTGTTTELNLADYFRANNMTYEPVPIETN 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E    Y A+ CDAYT D S L A +   + P++H+ILP+IISK PL P + QGD +W +
Sbjct: 181 AEAQEKYLANACDAYTTDASGLSATRSAFEAPNDHMILPEIISKEPLGPLVRQGDDQWAD 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           I+ WT  A++TAEE G+T  N +++   +T+PD+QR LG  +    G  LGL  DW    
Sbjct: 241 ILKWTLLALITAEEKGVTAANADEMKASSTDPDIQRLLGATEDG-FGAMLGLDNDWALNA 299

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+  GNYGE+F + LG  + + I RG NAL++ GGLMYA PIR
Sbjct: 300 IKAGGNYGEIFAKYLGTDTAVGIERGLNALYTDGGLMYAAPIR 342


>gi|313680184|ref|YP_004057923.1| amino acid ABC transporter substrate-binding protein, paat family
           [Oceanithermus profundus DSM 14977]
 gi|313152899|gb|ADR36750.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Oceanithermus profundus DSM 14977]
          Length = 339

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 147/324 (45%), Positives = 210/324 (64%), Gaps = 6/324 (1%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQY 80
              S L  +K+RG L CG+N G  GF  +    GD+ GFDVDFCRA+++AIFDDP+K+ +
Sbjct: 19  AQQSRLDVVKQRGKLICGVNGGAPGFGFIDEKTGDYVGFDVDFCRAVAAAIFDDPTKVDF 78

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +PLNAK RF A+Q+ ++D++ RNT  T  R+  LG+ F P+ ++DGQG ++ K  G+ SV
Sbjct: 79  VPLNAKVRFNAIQTGKVDVVFRNTTVTTSRDSQLGVDFLPVNFYDGQGVMVKKSLGVKSV 138

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
             L GA++C  AGTTTE    D  +AHN+    + F+   +  A   + RCDA T D S 
Sbjct: 139 YDLKGATVCTNAGTTTEKNWTDVDRAHNLGTKLLTFDDFSKSMAGLESGRCDAVTTDKSG 198

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
           L   K  +  P   VILP+ +SK PLA    Q D++W + ++W  YA + AEE GITQ N
Sbjct: 199 LVGWKAKSKDPESLVILPETLSKEPLAGFTFQNDSKWRDALTWIVYATMQAEEFGITQAN 258

Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320
           ++Q+ K ++NP ++RFLG++    +GE LGLT D+  R+IRH+GNYGE++ R+LG  S  
Sbjct: 259 LDQMLK-SSNPGIRRFLGVES--KLGEGLGLTNDFAARVIRHVGNYGEIYARHLGPDSPF 315

Query: 321 KIPR--GYNALWSKGGLMYAPPIR 342
            IPR    NAL++ GGL+Y+PP R
Sbjct: 316 FIPREGSLNALYTDGGLIYSPPFR 339


>gi|222102263|ref|YP_002546853.1| polar amino acid ABC transport substrate-binding protein, aapJ-2
           [Agrobacterium radiobacter K84]
 gi|221728380|gb|ACM31389.1| polar amino acid ABC transport substrate-binding protein, aapJ-2
           [Agrobacterium radiobacter K84]
          Length = 347

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 135/327 (41%), Positives = 203/327 (62%), Gaps = 4/327 (1%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              + +   S L  IK+RG +K G+     GF    ++G W+GF VDF RAL+  IF++P
Sbjct: 25  LLPNMANAGSTLDKIKERGVIKVGV-GTTPGFFTPDSSGRWQGFFVDFGRALAVTIFNNP 83

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
            K+++   + ++R  ALQ+ + DIL      T+ R   LG  F P+ ++DGQG ++ K  
Sbjct: 84  DKVEFTNSSPQQRLPALQAGEFDILLSGVTETITRAFKLGFHFGPVVFYDGQGLLVRKDL 143

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           G++  + L GA+I +Q+GTT EL +AD+F+    K+ P+  E   E   A  + R DA T
Sbjct: 144 GVTKGADLDGATIGIQSGTTGELNIADFFRKTGKKFTPVTIEETAEFTKALDSGRVDALT 203

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D + L A +    +P ++V+LP+ +SK PLAPAI  GD +W  IV+WT YA + AEE G
Sbjct: 204 QDSTDLAAKRTQLKKPDDYVLLPERLSKEPLAPAIRAGDDQWLEIVNWTIYATIQAEEFG 263

Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
           IT+ N++   K + +P +QRFLG+D S  +G+A+GL   + Y II+ +GNYGE+F+RN+G
Sbjct: 264 ITKDNVDTFLK-SDDPAIQRFLGVDPS--LGQAIGLDPKFAYNIIKAVGNYGEIFERNVG 320

Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342
             + L   RG N LW+KGGL+Y+PP R
Sbjct: 321 KGTPLNFDRGLNQLWTKGGLIYSPPFR 347


>gi|323139262|ref|ZP_08074316.1| extracellular solute-binding protein family 3 [Methylocystis sp.
           ATCC 49242]
 gi|322395483|gb|EFX98030.1| extracellular solute-binding protein family 3 [Methylocystis sp.
           ATCC 49242]
          Length = 343

 Score =  336 bits (861), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 156/344 (45%), Positives = 239/344 (69%), Gaps = 5/344 (1%)

Query: 1   MYKDFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M++    + L L+I  F   +  + AS L  +K+ G L CG++ G+VGF+     G+W G
Sbjct: 3   MFQKRVRASLSLLIASFCLLAAPSQASTLDSVKQSGALACGVSNGIVGFSIADDKGNWSG 62

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FDVDFCRA++SAIF D SK++++P+  +ERF AL+S + D+LSRN+ W    E+  GL F
Sbjct: 63  FDVDFCRAVASAIFGDASKLRFVPVGTEERFEALKSGKFDLLSRNSTWAFSNEVDQGLIF 122

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             +T++DGQGF++ K + I+S  +L+G+ +CV++ TTTE  +AD+FK ++M + P+ FE 
Sbjct: 123 AGVTFYDGQGFLVPKSRKIASALELNGSKVCVKSATTTEANVADFFKQNHMSFEPVRFET 182

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           + EI  AY A +C+A + DIS L+A+KL   +P++++IL D+ISK PL P + QGD +W 
Sbjct: 183 LAEIIKAYDAGQCNAISSDISQLHAIKLELKKPADNLILADVISKEPLGPVVRQGDDQWL 242

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           N+V W  +AM+ AEELG++  NI Q +K +  P V+RF+G +   +IG+ LGL+ DW   
Sbjct: 243 NLVKWVIFAMLNAEELGVSSSNIEQ-AKKSQKPAVRRFIGAE--GDIGKQLGLSPDWALN 299

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I++++GNYGE+ +RN+G +S+L I RG N LWS GG+ YAPP+R
Sbjct: 300 IVKNVGNYGEVLERNVGKKSKLGIARGLNQLWSMGGVQYAPPLR 343


>gi|59712139|ref|YP_204915.1| general L-amino acid-binding protein [Vibrio fischeri ES114]
 gi|59480240|gb|AAW86027.1| general L-amino acid-binding protein [Vibrio fischeri ES114]
          Length = 342

 Score =  336 bits (861), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 162/345 (46%), Positives = 231/345 (66%), Gaps = 6/345 (1%)

Query: 1   MY---KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M       F +I     L        +  L  ++K G+L+CG++TGL GF+   + G+W+
Sbjct: 1   MKFKTNKLFAAIATSAALLSAPALAASGTLEKVQKNGYLQCGVSTGLPGFSNPNSKGEWE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV+FC+A+++A+  D SK++Y+PL AKERF ALQS +ID+LSRNT WTL R+ SLGL 
Sbjct: 61  GIDVEFCQAVAAAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLN 120

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F  + Y+DGQGF++ K+ G++S  +L GAS+CVQ+GTTTEL LADYF+ +NM+Y P+VF+
Sbjct: 121 FVGVNYYDGQGFMVKKELGLTSAKELDGASVCVQSGTTTELNLADYFRNNNMEYKPVVFD 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +    + A RCD  T D S LYAL+L    P    +LP+IISK PL P + QGD +W
Sbjct: 181 TAAQTSKGFDAGRCDVLTTDQSGLYALRLNLKDPKTAQVLPEIISKEPLGPVVRQGDDQW 240

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
           +NI  W    M+ AEE GI+ KN +Q+ K + +P+++R LG+D     G+ LG+  DW Y
Sbjct: 241 FNINKWVLNTMINAEEYGISSKNADQMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGY 297

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++++ +GNYGE F+R +G  S L+I RG NALW+ GG +YA PIR
Sbjct: 298 QVVKQVGNYGESFERTVGEGSPLQISRGVNALWNAGGFVYAAPIR 342


>gi|323698172|ref|ZP_08110084.1| extracellular solute-binding protein family 3 [Desulfovibrio sp.
           ND132]
 gi|323458104|gb|EGB13969.1| extracellular solute-binding protein family 3 [Desulfovibrio
           desulfuricans ND132]
          Length = 337

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 144/342 (42%), Positives = 222/342 (64%), Gaps = 5/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M       I  +I L   + S  A  L  +++ G L  G++ G+ GF+   +NG W GFD
Sbjct: 1   MK--TLSKIFMVIALLAMAGSALAGTLEKVQQNGELVLGVSEGVAGFSAPDSNGKWAGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD  +A+++A+  +P  I+Y+PL +K++ +A+ S Q+D LSR T WT+ R+   G+ F  
Sbjct: 59  VDMGKAVAAAVLKNPDAIKYVPLASKQKIVAVSSGQVD-LSRGTTWTMKRDCKQGVDFTV 117

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + ++DGQG ++ K  G++  ++L GAS+ V +GTT+EL +AD+ +A+N+K   +VFE  +
Sbjct: 118 VLFYDGQGLMVKKGLGVTKATELDGASVAVVSGTTSELNVADFARANNIKLETVVFESKK 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY A R DA+T D+S L +L+     P EH+ILP++ SK PL+P +  GD +W ++
Sbjct: 178 EAFNAYVAGRADAFTTDVSQLASLRAGTTNPDEHIILPEVFSKEPLSPFVRHGDQQWKDL 237

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V+W  + ++ AEE GITQ N+ ++   +T+P VQR LG   + ++G  + L  DW  R I
Sbjct: 238 VTWVLFGLIEAEEKGITQANVLEMKAKSTDPVVQRMLGA--TGDVGALIDLDNDWLVRAI 295

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGEM+DRN G +S LKIPRG+N LW+KGGL+YA PIR
Sbjct: 296 QAVGNYGEMYDRNFGPKSALKIPRGHNNLWTKGGLIYAMPIR 337


>gi|126728211|ref|ZP_01744027.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Sagittula
           stellata E-37]
 gi|126711176|gb|EBA10226.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Sagittula
           stellata E-37]
          Length = 336

 Score =  335 bits (860), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 144/343 (41%), Positives = 211/343 (61%), Gaps = 8/343 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           MY+     I+   +    + +  A  L ++K RG L CG+NTGLVGFA   +NG+W+GFD
Sbjct: 1   MYR-----IIGAGLAMLLAGAATAGTLDEVKSRGTLNCGVNTGLVGFASKDSNGEWRGFD 55

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  DP  + ++   A  RF AL + +ID+L RNT W+   +I L + F  
Sbjct: 56  VGLCRAVAAAVLGDPMAVNFVETTAATRFTALNAGEIDLLVRNTTWSFSTDIDLKVDFAG 115

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y+DGQ F++ K  G+SS  +L G SICVQAGTT+ L + +YF  + M Y  +  E   
Sbjct: 116 INYYDGQAFMVPKTLGLSSARELDGRSICVQAGTTSALNVDEYFDRYQMSYEAVPVEGTA 175

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y    C+ Y+ D S L A++ T   P +HV+L DIISK PL PA+  GD +W +I
Sbjct: 176 EAQTLYLEGACEVYSSDASQLAAIRATFGNPGDHVLLEDIISKEPLGPAVRHGDNDWADI 235

Query: 241 VSWTHYAMVTAEELGITQKNINQVSK-DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           V WT  A++ AEELG+   N++++    T+ P+++R LG++    +GE LGL  DW  R 
Sbjct: 236 VRWTLNALIAAEELGVNSANVDELKAQGTSTPEIKRLLGLE--GRMGEMLGLDSDWAVRA 293

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+  GNYGE+F RN+G  + + + RG N  W++GGL+Y+PP R
Sbjct: 294 IKAGGNYGELFSRNIGVDTPIGLSRGLNLQWTEGGLLYSPPFR 336


>gi|209966385|ref|YP_002299300.1| general L-amino acid-binding periplasmic protein AapJ
           [Rhodospirillum centenum SW]
 gi|209959851|gb|ACJ00488.1| general L-amino acid-binding periplasmic protein AapJ
           [Rhodospirillum centenum SW]
          Length = 353

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 158/321 (49%), Positives = 222/321 (69%), Gaps = 5/321 (1%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
             S L  IK+RG L+CG+NTGL GF+   + G W G DVD C+A+++A   D  K+ Y P
Sbjct: 37  QQSTLDQIKQRGVLRCGVNTGLAGFSTPDSQGRWTGLDVDVCKAIAAAALGDAGKVHYAP 96

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           L+A++R  ALQS ++DILSRNT W+L R+   G+ F P+ Y+DGQGF++ K  G++S  Q
Sbjct: 97  LSAQQRLTALQSGEVDILSRNTTWSLSRDT-QGMNFGPVVYYDGQGFMVPKALGVTSAKQ 155

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-AL 201
           L GA++CVQ GTTTEL LADYF A+ M + P+V E  +E+ AA+ + RCD +T D S   
Sbjct: 156 LDGATVCVQTGTTTELNLADYFAANRMSFKPVVIESFDEVVAAFFSGRCDVFTTDGSQLA 215

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
               ++   P ++VILP+IISK PLAP +  GD +W++IV WT YA++ AEE GIT  N+
Sbjct: 216 SVRAVSAAAPDDYVILPEIISKEPLAPVVRHGDDQWFDIVKWTVYALLEAEEKGITAANV 275

Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
           ++  K + +P VQR LG+     +G++LGL   W YR I+ +GNYGE+F+RN+G  + L+
Sbjct: 276 DEKKK-SADPTVQRLLGVQP--GMGQSLGLDDAWAYRAIKAVGNYGEVFERNVGKATPLR 332

Query: 322 IPRGYNALWSKGGLMYAPPIR 342
           + RG NALW+ GGLMYAPP+R
Sbjct: 333 LERGLNALWTNGGLMYAPPVR 353


>gi|126724899|ref|ZP_01740742.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Rhodobacterales
           bacterium HTCC2150]
 gi|126706063|gb|EBA05153.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Rhodobacterales
           bacterium HTCC2150]
          Length = 338

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 155/342 (45%), Positives = 217/342 (63%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    S   L I   ++ +  A  L D+K RG L CG+ TGLVGFA   A+G W+GFD
Sbjct: 1   MKKSVIFS--ALTIAGLSASAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNADGRWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA++ A   D + ++++P   K RF AL S +ID+L+RNT WTL R+  L   F  
Sbjct: 59  VAVCRAVAVATLGDENAVEFVPTTGKTRFTALASGEIDMLARNTTWTLSRDADLKFTFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF+  K  G++S   L GA++C+Q GTTTEL LAD+F+++N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMAPKDLGVASAKDLDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD +T D S L A + T + P++HV+LP+I+SK PL P +  GD+EW +I
Sbjct: 179 EAQQQYLAGACDVFTTDASGLAATRATFENPADHVLLPEIVSKEPLGPLVRHGDSEWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+  AM+TAEELGIT  N  ++S  T NP++ R LG +    +GE LGL+ DW   II
Sbjct: 239 VRWSLNAMITAEELGITSANAAEMSAGTNNPEINRLLGSE--GTLGEMLGLSADWAKNII 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F+ N+G  + + + RG N+ W+ GGL+Y+PP R
Sbjct: 297 MTQGNYGEVFENNIGENTAIGLSRGLNSQWTDGGLIYSPPFR 338


>gi|254456453|ref|ZP_05069882.1| ABC transporter [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083455|gb|EDZ60881.1| ABC transporter [Candidatus Pelagibacter sp. HTCC7211]
          Length = 346

 Score =  335 bits (859), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 151/350 (43%), Positives = 223/350 (63%), Gaps = 12/350 (3%)

Query: 1   MYKDF--FVSILCLIILFFTS-----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M+K      S++ ++ + FT       +  +  L + +K+GF++CG++ GL GF+   A 
Sbjct: 1   MFKYLKQLTSLVAMVAVLFTFTTETMAAKKSKTLKNTQKKGFVRCGVSQGLPGFSNADAA 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+W G DVD CRA+++A+  D +K+++ PL+AKERF AL S +IDILSRNT WTL R+  
Sbjct: 61  GNWTGVDVDVCRAVAAAVLGDANKVKFTPLSAKERFTALTSNEIDILSRNTTWTLSRDAD 120

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYH 172
           +GL F  + ++DGQGF++ K  G SSV+   +G S C   GTTTEL + D+F +  + Y 
Sbjct: 121 IGLTFVGVNFYDGQGFMVRKNSGYSSVNDFKNGISACTNLGTTTELNMRDFFNSKGISYE 180

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           P+ FE+ +E+ AAY A RCD YT D S L A ++    P +HV+LP+ ISK PL P + Q
Sbjct: 181 PVTFEKADEVVAAYDAGRCDTYTTDKSGLAAQRIKLSSPDDHVVLPETISKEPLGPVVRQ 240

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
           GD+ W +IV W+   M+ AEE G+   N + + K + NP V+R +G +    +G ALGL 
Sbjct: 241 GDSVWEDIVRWSLNVMIEAEEYGVNSANADSM-KTSDNPAVKRLVGAE--GELGAALGLD 297

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            DW+ RII+ +GNYGE + RN+   + +   RG N LW+KGG++Y PP R
Sbjct: 298 NDWSLRIIKQVGNYGESYKRNI-ADTGILPDRGPNELWTKGGILYVPPAR 346


>gi|254477415|ref|ZP_05090801.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Ruegeria sp. R11]
 gi|214031658|gb|EEB72493.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Ruegeria sp. R11]
          Length = 338

 Score =  335 bits (859), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 155/342 (45%), Positives = 220/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F+    L +    + +  A  L D+K RG L CG+ TGLVGFA   ANG+W+GFD
Sbjct: 1   MKNKVFLG--ALTVAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VAVCRAVAAAVLGDSTAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y+DGQGF++ K  G+SS  +L GA++C+Q GTTTEL LAD+F+++N+ Y P+  E   
Sbjct: 119 INYYDGQGFMVPKDLGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T D P+ HV+LP+IISK PL P +  GD EW ++
Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFDDPAGHVLLPEIISKEPLGPLVRHGDHEWGDV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+  A++ AEELG+T  NIN+++  T NP++ R LG +    +GE LGL+ DW    +
Sbjct: 239 VRWSLNALIAAEELGVTSANINEMAAGTENPEINRLLGTE--GTLGEMLGLSADWAKNAV 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F +N+G  + + + RG NA W++GGL+YAPP R
Sbjct: 297 AAGGNYGEVFAKNIGEDTPIGLARGLNAQWTEGGLLYAPPFR 338


>gi|254463676|ref|ZP_05077087.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Rhodobacterales
           bacterium Y4I]
 gi|206684584|gb|EDZ45066.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Rhodobacterales
           bacterium Y4I]
          Length = 338

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 159/342 (46%), Positives = 223/342 (65%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L +    + +  A  L D+K RG L CG+ TGLVGFA   ANG+W+GFD
Sbjct: 1   MKKTVFLG--ALTVAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VAVCRAVAAAVLGDSTAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ G+SS  +L GA++C+Q GTTTEL LAD+F+++N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T D PS HVILP+IISK PL P +  GD EW ++
Sbjct: 179 EAQQQYLAGSCDVYTTDASGLAATRATFDDPSGHVILPEIISKEPLGPLVRHGDHEWGDV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+  A++ AEELGIT  NIN+++  T NP++ R LG +   N+GE LGL  DW  + +
Sbjct: 239 VRWSLMALIAAEELGITSANINEMAAGTENPEINRLLGSE--GNLGEMLGLNADWAMKAV 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F +N+G  + + + RG NA W++GGL+YAPP R
Sbjct: 297 AAGGNYGEIFAKNIGEDTPVGLARGLNAQWTEGGLLYAPPFR 338


>gi|126659578|ref|ZP_01730709.1| extracellular solute-binding protein, family 3 [Cyanothece sp.
           CCY0110]
 gi|126619121|gb|EAZ89859.1| extracellular solute-binding protein, family 3 [Cyanothece sp.
           CCY0110]
          Length = 334

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 139/324 (42%), Positives = 215/324 (66%), Gaps = 6/324 (1%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            + + S L  IK+RG L CG+N  + GF+ V  NG + G DVD CRA+++A+FDDP K++
Sbjct: 16  TTASTSRLDTIKQRGTLICGVNGEVPGFSFVDENGQYSGLDVDICRAIAAALFDDPEKVE 75

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           Y  L+A+ERF A+QS ++D+L+RNT WT+ R+ + G+ F P  ++DGQG ++    G+++
Sbjct: 76  YRKLSAQERFPAVQSGEVDVLNRNTTWTISRDTTNGMEFAPTVFYDGQGIMVTTASGVAN 135

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           +  L+G SICV AGTTTE  LAD  +   +  Y+P+ FE V+ + AAY+  RC+  T D 
Sbjct: 136 MEGLAGKSICVLAGTTTEQNLADQMRKRGIEDYNPVTFEDVDALYAAYQEGRCEGVTADR 195

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           S L A +      ++H IL  ++SK PL PA+   D+ W++ V W  ++++ AEELGI  
Sbjct: 196 SQLVARRSILPNRNDHAILNVVLSKEPLGPAVKNNDSAWFDAVKWITFSLIQAEELGINS 255

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
           +NI    + + +P+V+RFLG+D    +GE +GL  D+  R ++H+GNYGE+++RN+G   
Sbjct: 256 ENIETF-ETSEDPNVRRFLGLDD--KLGEGMGLPNDFAARAVKHVGNYGEVYERNIGE-- 310

Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342
            L + RG N LW++GGL+Y+PP R
Sbjct: 311 PLGLDRGQNNLWTEGGLLYSPPFR 334


>gi|291571845|dbj|BAI94117.1| putative ABC transporter substrate-binding protein [Arthrospira
           platensis NIES-39]
          Length = 343

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 137/325 (42%), Positives = 216/325 (66%), Gaps = 2/325 (0%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            +  T  S L  +K RGFL CG++ G+ GF+ V  +G++ G DVD C+A+++A+FDDP+ 
Sbjct: 21  AAGGTGQSRLNVVKNRGFLICGVDGGIPGFSFVDESGEYSGLDVDVCKAVAAALFDDPNA 80

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           +QY  L++ ERF A++S ++D+LSRNT WTL R+ S+G+ F P T++DGQG ++    GI
Sbjct: 81  VQYRNLDSTERFEAMRSGEVDMLSRNTTWTLSRDTSVGMEFAPTTFYDGQGMMVRADSGI 140

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
           +++      ++CV+AGTTTEL L D  +   + +  + F++ +   AAY   RC+  T D
Sbjct: 141 TTLEDFQDLAVCVEAGTTTELNLTDNMRERGITFETVTFQQADPAYAAYAEGRCEGMTSD 200

Query: 198 ISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
            S L A + T   P++H+IL   +SK PL P  +  D+ W++ V W  +A+  AEELGIT
Sbjct: 201 KSQLLARRSTLPNPNDHIILDVTMSKEPLGPVTLNNDSAWFDTVKWVTFALFEAEELGIT 260

Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317
           Q N+ Q+++ + NP ++RFLG++   ++G  +GLT D+  R+I+H+GNY E++DRNLG  
Sbjct: 261 QANVEQIAQTSENPTIRRFLGVE--GDLGTGMGLTNDFAARVIKHVGNYAEVYDRNLGTG 318

Query: 318 SELKIPRGYNALWSKGGLMYAPPIR 342
           S+  +PR  N LW+ GGL+++PP R
Sbjct: 319 SQFNLPRNENELWTNGGLLFSPPFR 343


>gi|229523536|ref|ZP_04412941.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae bv. albensis VL426]
 gi|229337117|gb|EEO02134.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae bv. albensis VL426]
          Length = 342

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 162/318 (50%), Positives = 223/318 (70%), Gaps = 3/318 (0%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  +  +GF+ CG++TGL GF+   A G+W+G DV++C+A+++A+  D +K++++PL 
Sbjct: 28  STLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEYCQAMAAAVLGDKTKVKFVPLT 87

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           AKERF ALQS +ID+LSRNT WTL R+ +LG  F  + Y+DGQGF++ K  G+ S  +L+
Sbjct: 88  AKERFTALQSGEIDVLSRNTTWTLQRDSALGRNFVGVNYYDGQGFMVKKDLGVKSAKELN 147

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   +    + A RCD  T D S LYAL
Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +L  ++P   V+LP+IISK PL P + Q D +W+N+  W  YAMV AEE GIT KN++++
Sbjct: 208 RLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAMVNAEEYGITSKNVDEM 267

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
            K + NP+V R LG D     G  LG+  DW+Y+I++ +GNYGE FDR +G  S LKI R
Sbjct: 268 MK-SDNPEVMRILGRDGPKGTG--LGIRDDWSYQIVKQVGNYGESFDRTVGAGSPLKIDR 324

Query: 325 GYNALWSKGGLMYAPPIR 342
           G NALW+ GG MYAPPIR
Sbjct: 325 GVNALWNAGGFMYAPPIR 342


>gi|172037183|ref|YP_001803684.1| extracellular solute-binding protein [Cyanothece sp. ATCC 51142]
 gi|171698637|gb|ACB51618.1| extracellular solute-binding protein, family 3 [Cyanothece sp. ATCC
           51142]
          Length = 349

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 139/324 (42%), Positives = 214/324 (66%), Gaps = 6/324 (1%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +   S L  IK+RG L CG+N  + GF+ V  NG + G DVD CRA+++A+FDDP K++
Sbjct: 31  TTATTSRLDTIKQRGTLICGVNGEVPGFSFVDENGQYSGLDVDICRAIAAALFDDPEKVE 90

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           Y  L+A+ERF A+QS ++D+L+RNT WT+ R+ + G+ F P  ++DGQG ++    G++ 
Sbjct: 91  YRKLSAQERFPAVQSGEVDVLNRNTTWTISRDTTNGMEFAPTVFYDGQGIMVTTASGVAD 150

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           +  L+G SICV AGTTTE  LAD  +   +  Y+P+ FE V+ + AAY+  RC+  T D 
Sbjct: 151 MEGLAGKSICVLAGTTTEQNLADQMRKRGIEDYNPVTFEDVDALYAAYQEGRCEGVTADR 210

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           S L A +      ++H IL  ++SK PL PA+   D+ W++ V W  ++++ AEELGI  
Sbjct: 211 SQLVARRSILPNRNDHAILNVVLSKEPLGPAVKNNDSAWFDAVKWITFSLIQAEELGINS 270

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
           +NI    + + +P+V+RFLG+D    +GE +GL  D+  R+++H+GNYGE+++RN+G   
Sbjct: 271 QNIATF-ETSEDPNVRRFLGLDD--KLGEGMGLPNDFAARVVKHVGNYGEVYERNIGE-- 325

Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342
            L + RG N LW++GGL+Y+PP R
Sbjct: 326 PLGLDRGPNNLWTEGGLLYSPPFR 349


>gi|119946443|ref|YP_944123.1| ABC amino acid transporter extracellular solute-binding protein,
           family 3 [Psychromonas ingrahamii 37]
 gi|119865047|gb|ABM04524.1| ABC amino acid transporter extracellular solute-binding protein,
           family 3 [Psychromonas ingrahamii 37]
          Length = 337

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 163/321 (50%), Positives = 229/321 (71%), Gaps = 3/321 (0%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
            +AS L ++ K+G + CGI+TG+ GF+   + G W+G DVDFC+++++A+F D SK++Y+
Sbjct: 20  ASASTLEEVVKKGDISCGISTGIAGFSSTDSKGVWEGLDVDFCKSVAAAVFGDASKVKYI 79

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           PL AKERF ALQS +ID+LSR T WT  R+ SLGL F  + Y+DGQGF+++KK G++S  
Sbjct: 80  PLTAKERFTALQSGEIDVLSRATTWTATRDTSLGLNFAGVNYYDGQGFLVNKKIGVTSAK 139

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           +LSGA+ C+QAGTT+EL L DYF+A+NM+Y  + ++   +    +++ RCD  T D S L
Sbjct: 140 ELSGATFCIQAGTTSELNLTDYFQANNMEYRAVTYDTSGQTINGFKSGRCDVITSDASQL 199

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
           Y LKL  D P   ++LP+IISK PL P + QGD EW+NIV WT +A + AEELG++  N+
Sbjct: 200 YGLKLKLDDPDSAIVLPEIISKEPLGPVVRQGDDEWFNIVRWTMFATLEAEELGVSSANV 259

Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
           + + K + NP + R LG  KS   GE LGL  DW Y+I++ +GNYGEMFD+N+G  S L 
Sbjct: 260 DAMLK-SENPSIMRLLG--KSGTAGENLGLKGDWVYQIVKQVGNYGEMFDKNVGKDSPLN 316

Query: 322 IPRGYNALWSKGGLMYAPPIR 342
           I RG N LW++GGLMY+ PIR
Sbjct: 317 IDRGLNKLWNQGGLMYSMPIR 337


>gi|297624238|ref|YP_003705672.1| family 3 extracellular solute-binding protein [Truepera
           radiovictrix DSM 17093]
 gi|297165418|gb|ADI15129.1| extracellular solute-binding protein family 3 [Truepera
           radiovictrix DSM 17093]
          Length = 339

 Score =  335 bits (858), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 150/342 (43%), Positives = 220/342 (64%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F  S LC++I  FT        L +++ RG L CG+N  L GF  V   G+ +GFD
Sbjct: 1   MRKWFVGSALCVLIASFTVAQAQGK-LAEVRNRGSLVCGVNDVLPGFGTVNEEGEHEGFD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFC+A+++A+  D   + Y PL+A+ERF A+Q+ ++D+L RNT WT  R+  +GL F P
Sbjct: 60  VDFCKAIAAAVLGDADAVTYRPLSAQERFTAVQTGEVDVLIRNTTWTSSRDTEVGLNFGP 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + ++DGQGF++ +  GI S+  L G  I VQ+GTTTEL LAD   A +++Y P++FE  +
Sbjct: 120 VIFYDGQGFMVRRDSGIESLEDLEGRRIGVQSGTTTELNLADVMSALDIQYEPVIFETSD 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++ AAY     DA+T D S L +L ++   P EH IL   ISK PLAPA++ GD EWY++
Sbjct: 180 QLVAAYDDGAVDAWTTDKSGLASLLISLSDPEEHRILDATISKEPLAPAVLHGDDEWYDV 239

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W  + ++ AEE GIT +N+ ++++ +TNP++QR LG + S+   E +GL  D     I
Sbjct: 240 VKWVIFGLMEAEEYGITSENVRELAETSTNPNIQRILGAEPSAV--EQIGLEADAIATAI 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNYGE+++RNLG  +   IPRG NA + +GGL+Y  P R
Sbjct: 298 EAVGNYGEIYERNLGEGTPFNIPRGLNAQYYEGGLIYGMPFR 339


>gi|163740274|ref|ZP_02147668.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis
           2.10]
 gi|161386132|gb|EDQ10507.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis
           2.10]
          Length = 338

 Score =  334 bits (857), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 155/342 (45%), Positives = 219/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +    L +    + +  A  L D+K RG L CG+ TGLVGFA   ANG+W+GFD
Sbjct: 1   MKNKVILG--ALTVAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VAVCRAVAAAVLGDSTAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ G+SS  +L GA++C+Q GTTTEL LAD+F+++N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T D PS HV+LP+IISK PL P +  GD EW ++
Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFDDPSAHVLLPEIISKEPLGPLVRHGDHEWGDV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+  A+V AEELG+T  NI +++  T NP++ R LG +    +GE LGL+ DW    I
Sbjct: 239 VRWSLNALVAAEELGVTSANIGEMAAGTENPEINRLLGTE--GTLGEMLGLSADWAKNAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F +N+G  + + + RG NA W++GGL+YAPP R
Sbjct: 297 GAGGNYGEVFAKNIGEDTPIGLARGLNAQWTEGGLLYAPPFR 338


>gi|163739481|ref|ZP_02146891.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Phaeobacter
           gallaeciensis BS107]
 gi|161387234|gb|EDQ11593.1| glutamate/glutamine/aspartate/asparagine-binding protein BztA
           precursor [Phaeobacter gallaeciensis BS107]
          Length = 338

 Score =  334 bits (857), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 156/342 (45%), Positives = 219/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +    L I    + +  A  L D+K RG L CG+ TGLVGFA   ANG+W+GFD
Sbjct: 1   MKNKVILG--ALTIAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VAVCRAVAAAVLGDSTAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ G+SS  +L GA++C+Q GTTTEL LAD+F+++N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T D PS HV+LP+IISK PL P +  GD EW ++
Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFDDPSAHVLLPEIISKEPLGPLVRHGDHEWGDV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+  A+V AEELG+T  NI +++  T NP++ R LG +    +GE LGL+ DW    I
Sbjct: 239 VRWSLNALVAAEELGVTSANIGEMAAGTENPEINRLLGTE--GTLGEMLGLSADWAKNAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F +N+G  + + + RG NA W++GGL+YAPP R
Sbjct: 297 GAGGNYGEVFAKNIGEDTPIGLARGLNAQWTEGGLLYAPPFR 338


>gi|259415913|ref|ZP_05739833.1| glutamate/glutamine/aspartate/asparagine-binding protein
           bztAprecursor [Silicibacter sp. TrichCH4B]
 gi|259347352|gb|EEW59129.1| glutamate/glutamine/aspartate/asparagine-binding protein
           bztAprecursor [Silicibacter sp. TrichCH4B]
          Length = 378

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 158/342 (46%), Positives = 220/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F     L +    + +  A  L D+K R  L CG++TGLVGF+   ANG+W+GFD
Sbjct: 41  MNNSVFFG--ALTVAGLAAGAAAAGTLDDVKARDKLNCGVSTGLVGFSAPNANGEWEGFD 98

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +  CRA+++A+  DPSK++Y+P   K RF AL S ++D+L+RNT WT  R++ L   F  
Sbjct: 99  IAVCRAVAAAVLGDPSKVEYVPTTGKTRFTALASGEVDVLARNTTWTFSRDVDLKFEFIG 158

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ G+SS  +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+  E   
Sbjct: 159 VNYYDGQGFMIPKELGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 218

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T D PS HVILP+IISK PL P +  GD EW ++
Sbjct: 219 EARQQYLAGACDVYTTDASGLAATRATFDDPSNHVILPEIISKEPLGPLVRHGDNEWGDV 278

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A+V AEELGIT  N+++ +  T NP++ R LG +   N+GE LGL  DW  + +
Sbjct: 279 VRWTLNALVAAEELGITSANMSEKAAGTDNPEINRLLGSE--GNLGEMLGLDADWAQKAL 336

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F + +G  + + + RG NA W+ GGL+YAPP R
Sbjct: 337 AAGGNYGEIFAKTIGEDTPVGLARGLNAQWTDGGLLYAPPFR 378


>gi|83854941|ref|ZP_00948471.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Sulfitobacter sp.
           NAS-14.1]
 gi|83941464|ref|ZP_00953926.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Sulfitobacter sp.
           EE-36]
 gi|83842784|gb|EAP81951.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Sulfitobacter sp.
           NAS-14.1]
 gi|83847284|gb|EAP85159.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Sulfitobacter sp.
           EE-36]
          Length = 347

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 157/342 (45%), Positives = 219/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F     L +    + +  AS L D+K RG L CG+ TGL GFA   ANG+W+GFD
Sbjct: 10  MNKSVFFG--ALTVAGLAAGAAAASTLDDVKARGKLNCGVTTGLAGFAAPNANGEWEGFD 67

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  DP+ ++++P   K RF AL S +ID L+RNT WT  R++ L   F  
Sbjct: 68  VAVCRAVAAAVLGDPAAVEFIPTTGKTRFTALASGEIDFLARNTTWTFSRDVDLKFDFIG 127

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ G+SS   L GA++C+Q GTTTEL LAD+F+ +N+ Y P+  E   
Sbjct: 128 VNYYDGQGFMVPKELGVSSAKDLDGATVCIQTGTTTELNLADFFRNNNISYEPVPVETNA 187

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T + P EH+ILP+IISK PL P +  GD +W ++
Sbjct: 188 EGQQQYLAGACDTYTTDASGLAATRATFENPGEHIILPEIISKEPLGPLVRHGDNDWGDV 247

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             W  YA++ AEELG+T  N+ +++ +TTNP+V R LG +    +GE LGL  DW  + I
Sbjct: 248 TRWVLYALIAAEELGVTSANVEEMTTNTTNPEVARLLGTE--GTLGEMLGLEADWAKKAI 305

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F +N+G ++ + + RG NA W+ GGLMYAPP R
Sbjct: 306 ASQGNYGEIFAKNIGEETPIGLARGLNAQWTDGGLMYAPPFR 347


>gi|126737042|ref|ZP_01752777.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseobacter sp.
           SK209-2-6]
 gi|126721627|gb|EBA18330.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseobacter sp.
           SK209-2-6]
          Length = 338

 Score =  333 bits (855), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 155/342 (45%), Positives = 222/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F+    L +    + +  A  L D+K RG L CG+ TGLVGFA   ANG+W+GFD
Sbjct: 1   MKNTVFLG--ALTVAGLAAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNANGEWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A   D + ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VAVCRAVAAAALGDSTAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFTG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ G+SS  +L GA++C+Q GTTTEL LAD+F+++N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T D P++HV+LP+IISK PL P +  GD EW ++
Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRATFDAPADHVLLPEIISKEPLGPLVRHGDHEWGDV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A++TAEELG+T  NI ++S  T+NP++ R LG +    +GE LGL+ DW    +
Sbjct: 239 VRWTLNALITAEELGVTSANIAEMSAGTSNPEINRLLGTE--GTLGEMLGLSADWGKNAV 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F +N+G  + + + RG NA W++GGL+Y+PP R
Sbjct: 297 AAGGNYGEVFAKNIGEDTPIGLARGLNAQWTEGGLLYSPPFR 338


>gi|89110028|ref|AP_003808.1| predicted amino-acid transporter subunit [Escherichia coli str.
           K-12 substr. W3110]
 gi|170082796|ref|YP_001732116.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia
           coli str. K-12 substr. DH10B]
 gi|218702040|ref|YP_002409669.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia
           coli IAI39]
 gi|254163203|ref|YP_003046311.1| putative amino-acid transporter subunit [Escherichia coli B str.
           REL606]
 gi|606209|gb|AAA58072.1| ORF_o305; frameshift upstream would extend start [Escherichia coli
           str. K-12 substr. MG1655]
 gi|85676059|dbj|BAE77309.1| predicted amino-acid transporter subunit [Escherichia coli str. K12
           substr. W3110]
 gi|169890631|gb|ACB04338.1| predicted amino-acid transporter subunit; periplasmic-binding
           component of ABC superfamily [Escherichia coli str. K-12
           substr. DH10B]
 gi|218372026|emb|CAR19884.1| amino-acid transporter subunit ; periplasmic-binding component of
           ABC superfamily [Escherichia coli IAI39]
 gi|242378802|emb|CAQ33594.1| yhdW, subunit of YhdW/YhdX/YhdY/YhdZ ABC transporter [Escherichia
           coli BL21(DE3)]
 gi|253975104|gb|ACT40775.1| predicted amino-acid transporter subunit [Escherichia coli B str.
           REL606]
 gi|253979260|gb|ACT44930.1| predicted amino-acid transporter subunit [Escherichia coli
           BL21(DE3)]
 gi|309703687|emb|CBJ03028.1| Putative ABC transporter, substrate-binding protein [Escherichia
           coli ETEC H10407]
 gi|315137851|dbj|BAJ45010.1| extracellular solute-binding protein [Escherichia coli DH1]
          Length = 305

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 149/305 (48%), Positives = 214/305 (70%), Gaps = 2/305 (0%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           CGI+ GL GF+   A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++
Sbjct: 3   CGISDGLPGFSYADADGKFSGIDVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+LSRNT WT  R+  +G+AF  +TY+DG GF+ H K G+ S  +L GA++C+QAGT TE
Sbjct: 63  DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           L +ADYFKA+NMKY P+ F+R +E   A  + RCD    D S LYAL++    P+E ++L
Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL 182

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI  +N+++ + +   PD+   L
Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242

Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337
           G +   + G+ L L   W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y
Sbjct: 243 GKE--GDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300

Query: 338 APPIR 342
           APP+R
Sbjct: 301 APPVR 305


>gi|281180310|dbj|BAI56640.1| amino acid ABC transporter substrate binding component [Escherichia
           coli SE15]
          Length = 305

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 149/305 (48%), Positives = 214/305 (70%), Gaps = 2/305 (0%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           CGI+ GL GF+   A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++
Sbjct: 3   CGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+LSRNT WT  R+  +G+AF  +TY+DG GF+ H K G+ S  +L GA++C+QAGT TE
Sbjct: 63  DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           L +ADYFKA+NMKY P+ F+R +E   A  + RCD    D S LYAL++    P+E ++L
Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPTEWIVL 182

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI  +N+++ + +   PD+   L
Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242

Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337
           G +   + G+ L L   W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y
Sbjct: 243 GKE--GDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300

Query: 338 APPIR 342
           APP+R
Sbjct: 301 APPVR 305


>gi|152998090|ref|YP_001342925.1| extracellular solute-binding protein [Marinomonas sp. MWYL1]
 gi|150839014|gb|ABR72990.1| extracellular solute-binding protein family 3 [Marinomonas sp.
           MWYL1]
          Length = 339

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 142/342 (41%), Positives = 214/342 (62%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K    +I+   +L  ++    A  L ++K RG +KCGI+ G  GF+     G+W G D
Sbjct: 1   MKKLIATAIIGAGVLSASASVYAADKLEEVKARGVMKCGIHPGKAGFSTPDTKGNWTGLD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+ C+A+++A+F D SK++++ +N++ R  AL + +ID+L+R+T +T  R+   G+    
Sbjct: 61  VELCKAVAAAVFGDASKVEFITMNSRNRLTALVTDEIDMLARSTTFTATRDGLNGVDVTT 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             ++DGQ  ++ K+ G++S+ +L GA+IC   GTT+E  + DYF++  + Y  ++ E   
Sbjct: 121 PWFYDGQALMVKKELGVNSIEELDGATICTYPGTTSEKNINDYFESRGLSYKALIVEGSA 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E  AAY A+RCDA T D SAL A +     PS +VILP+ ISK PL   + QG+ EW  +
Sbjct: 181 ESTAAYLANRCDAVTNDASALAADRQGMPDPSANVILPERISKEPLGAYVKQGNDEWRQV 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V+WT  A++ AEE GITQ N+++  K T  PDV R LG +   ++G+  GL   W Y  I
Sbjct: 241 VTWTAMALIEAEEQGITQSNVDEKLKSTK-PDVMRLLGTE--GSLGKNFGLDDKWAYNAI 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE+FDRNLG  S LK  RG N L++KGGL+YA P R
Sbjct: 298 KAVGNYGEIFDRNLGKDSALKFDRGLNNLYTKGGLLYAYPFR 339


>gi|71083646|ref|YP_266366.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1062]
 gi|71062759|gb|AAZ21762.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1062]
          Length = 346

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 150/350 (42%), Positives = 221/350 (63%), Gaps = 12/350 (3%)

Query: 1   MYK--DFFVSILCLIILFFTS-----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M+K      S++ ++ + FT       +  +  L + +K+GF++CG++ GL GF+   A 
Sbjct: 1   MFKYVKQLTSLVAMVAVLFTFTTETMAAKKSKTLKNTQKKGFVRCGVSQGLPGFSNADAA 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+W G DVD CRA+++A+  D +K+++ PL+AKERF AL S +IDILSRNT WTL R+  
Sbjct: 61  GNWTGVDVDVCRAVAAAVLGDANKVKFTPLSAKERFTALTSGEIDILSRNTTWTLSRDAD 120

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYH 172
           +GL F  + ++DGQGF++ K  GI+S SQ  +G S C   GTTTEL + D+F +  + Y 
Sbjct: 121 IGLTFVGVNFYDGQGFMVRKDSGITSTSQFKNGISACTNIGTTTELNMRDFFNSKGISYE 180

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           P+ FE+ +E+ AAY + RCD YT D S L A +     P +HV+LP+ ISK PL P + Q
Sbjct: 181 PVAFEKADEVVAAYDSGRCDTYTTDKSGLAAQRTKMTNPDDHVVLPETISKEPLGPVVRQ 240

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
           GD  W +IV W+   M+ AEE GI   N + + K + NP ++R +G +    +G A GL 
Sbjct: 241 GDAVWEDIVRWSLNVMIEAEEYGINSANAD-MMKTSENPQIKRLVGSE--GELGAAFGLD 297

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            DW+ RII+ +GNYGE + RN+   + +   RG N +W+KGGL+Y PP R
Sbjct: 298 NDWSLRIIKQVGNYGESYKRNI-ADTGILPDRGPNQIWTKGGLLYVPPAR 346


>gi|311109272|ref|YP_003982125.1| general L-amino acid-binding periplasmic protein AapJ 5
           [Achromobacter xylosoxidans A8]
 gi|310763961|gb|ADP19410.1| general L-amino acid-binding periplasmic protein AapJ 5
           [Achromobacter xylosoxidans A8]
          Length = 338

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 144/318 (45%), Positives = 216/318 (67%), Gaps = 4/318 (1%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L  +++RG + CG  TG  GF+   A G W+G DVD CRA+++A+F D +KI+ +PLN+
Sbjct: 24  TLDVVRQRGAVACGTTTGFAGFSAPDAQGKWQGLDVDLCRAIAAAVFGDANKIKVVPLNS 83

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
           ++RF ALQS ++D+L+RNT  T  R+ +LG+    I ++DGQGF++ K  G+ S  +++G
Sbjct: 84  QQRFTALQSGEVDVLTRNTTVTQQRDTALGIIHAGINFYDGQGFLVPKSLGVKSAKEING 143

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           A+IC+Q GT+ E TLAD+ +A+N+ Y P+V E   E+  A+ A RCD ++ D S L +++
Sbjct: 144 ATICLQTGTSNENTLADWARANNVSYKPVVIETFNEVVNAFAAGRCDVFSTDASGLASIR 203

Query: 206 -LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                 P ++V+LP+IISK PL P + QGD  W NIV W+  AM+ AEE G++  N+++ 
Sbjct: 204 ISKLQNPDDYVVLPEIISKEPLGPFVRQGDDAWLNIVRWSLSAMIEAEEYGVSSANVDEQ 263

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
           +K + NP+++R LG+      G  LGL + W Y I++ +GNYGE F+RN+G  S LKI R
Sbjct: 264 AK-SANPNIKRILGVTPGG--GANLGLDEKWAYNIVKQVGNYGESFERNVGQGSPLKIKR 320

Query: 325 GYNALWSKGGLMYAPPIR 342
           G NA W++GGLMYA PIR
Sbjct: 321 GLNAQWTQGGLMYALPIR 338


>gi|262277476|ref|ZP_06055269.1| general L-amino acid-binding periplasmic protein AapJ [alpha
           proteobacterium HIMB114]
 gi|262224579|gb|EEY75038.1| general L-amino acid-binding periplasmic protein AapJ [alpha
           proteobacterium HIMB114]
          Length = 347

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 157/350 (44%), Positives = 226/350 (64%), Gaps = 11/350 (3%)

Query: 1   MYKDF-FVSILCLIILFFTSFSTNA------SILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M      +  L ++    T+           S L   K +GF+KCG++ G+ GF+   A+
Sbjct: 1   MKNIMKAIGSLSVLAFVLTACGDGGGAKKTTSTLDTTKSQGFVKCGVSQGVPGFSNADAS 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+W G DVD CRA+++A+  D SK++Y  L+AKERF ALQ+ +IDILSRNT WTL R+ S
Sbjct: 61  GNWTGIDVDVCRAVAAAVLGDASKVKYTGLSAKERFTALQAGEIDILSRNTTWTLERDAS 120

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYH 172
           +GL F  + ++DGQGF++ K  G+ SV+   +G  +C   GTTTEL +AD+FK+  +KY 
Sbjct: 121 IGLTFVGVNFYDGQGFMVRKSTGLKSVNDFKNGVKVCTNLGTTTELNMADFFKSKGVKYE 180

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           P+VFE+ +E+  AY A RCD YT D SAL A       P+EHV+LP+ ISK PL P + Q
Sbjct: 181 PVVFEKADEVVQAYDAGRCDTYTTDKSALAAQSTKMKDPTEHVVLPETISKEPLGPVVRQ 240

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
           GD++W ++V W+    + AEE G+   NI+ + K++ NP +QR +G + + N GEALGL 
Sbjct: 241 GDSKWEDVVRWSLNVFIEAEEYGVNSGNIDSM-KESKNPAIQRIVGAEGTKN-GEALGLD 298

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             W+YRII+ +GNYGE + RNL   + +   RG N LW+KGG++Y PP+R
Sbjct: 299 NQWSYRIIKQIGNYGESYKRNL-ADTNIMPERGPNQLWTKGGILYVPPVR 347


>gi|15803803|ref|NP_289837.1| putative periplasmic binding transport protein [Escherichia coli
           O157:H7 EDL933]
 gi|209920741|ref|YP_002294825.1| amino acid ABC transporter substrate binding component [Escherichia
           coli SE11]
 gi|218555833|ref|YP_002388746.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia
           coli IAI1]
 gi|218696968|ref|YP_002404635.1| amino-acid transporter subunit ; periplasmic-binding component of
           ABC superfamily [Escherichia coli 55989]
 gi|218706883|ref|YP_002414402.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia
           coli UMN026]
 gi|12517899|gb|AAG58397.1|AE005554_8 putative periplasmic binding transport protein [Escherichia coli
           O157:H7 str. EDL933]
 gi|13363614|dbj|BAB37564.1| putative periplasmic binding transport protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|209757458|gb|ACI77041.1| putative periplasmic binding transport protein [Escherichia coli]
 gi|209757460|gb|ACI77042.1| putative periplasmic binding transport protein [Escherichia coli]
 gi|209757462|gb|ACI77043.1| putative periplasmic binding transport protein [Escherichia coli]
 gi|209757464|gb|ACI77044.1| putative periplasmic binding transport protein [Escherichia coli]
 gi|209757466|gb|ACI77045.1| putative periplasmic binding transport protein [Escherichia coli]
 gi|209914000|dbj|BAG79074.1| amino acid ABC transporter substrate binding component [Escherichia
           coli SE11]
 gi|218353700|emb|CAU99962.1| amino-acid transporter subunit ; periplasmic-binding component of
           ABC superfamily [Escherichia coli 55989]
 gi|218362601|emb|CAR00226.1| amino-acid transporter subunit ; periplasmic-binding component of
           ABC superfamily [Escherichia coli IAI1]
 gi|218433980|emb|CAR14897.1| amino-acid transporter subunit ; periplasmic-binding component of
           ABC superfamily [Escherichia coli UMN026]
          Length = 305

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 149/305 (48%), Positives = 214/305 (70%), Gaps = 2/305 (0%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           CGI+ GL GF+   A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++
Sbjct: 3   CGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+LSRNT WT  R+  +G+AF  +TY+DG GF+ H K G+ S  +L GA++C+QAGT TE
Sbjct: 63  DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           L +ADYFKA+NMKY P+ F+R +E   A  + RCD    D S LYAL++    P+E ++L
Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL 182

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI  +N+++ + +   PD+   L
Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242

Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337
           G +   + G+ L L   W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y
Sbjct: 243 GKE--GDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300

Query: 338 APPIR 342
           APP+R
Sbjct: 301 APPVR 305


>gi|152989661|ref|YP_001346638.1| putative amino acid-binding protein [Pseudomonas aeruginosa PA7]
 gi|150964819|gb|ABR86844.1| probable amino acid-binding protein [Pseudomonas aeruginosa PA7]
          Length = 341

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 153/323 (47%), Positives = 230/323 (71%), Gaps = 2/323 (0%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +   + L  +K++G+L+CG++ GL GF+   A G ++G DVDFCRAL++A+F D  K++
Sbjct: 21  TAQAGATLDAVKRKGYLQCGVSDGLAGFSYADAKGRYQGLDVDFCRALAAALFGDAGKVR 80

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           + PL+  ERF ALQS  +D+LSRNT WT  R+ +LG+ F  +TYFDGQGF+++++ G+SS
Sbjct: 81  FTPLSTTERFSALQSGTVDLLSRNTSWTSARDTALGIHFTGVTYFDGQGFLVNRRLGVSS 140

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
             +L  A++C+Q+GTT EL +ADYF+AH ++Y  ++ +  E+   A  A +CD  + D S
Sbjct: 141 ARELKDATVCIQSGTTNELNVADYFRAHGIRYKAVLDDSYEKSARALEAGQCDVLSSDQS 200

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            LYA +L   +P ++V+LP++ISK PL PA+ QGD  W+NIV WT Y ++ AEELG+T  
Sbjct: 201 QLYAQRLKLAKPEQYVVLPEVISKEPLGPAVRQGDEAWFNIVRWTLYGLLNAEELGVTSS 260

Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319
           N+ + ++D+ NPDV R LG +   ++G+ L L +DW  +++R +GNYGE+F RN+G+ S 
Sbjct: 261 NVERQARDSRNPDVARLLGSE--GDVGKDLQLPRDWVVQMVRQVGNYGEIFARNVGDGSP 318

Query: 320 LKIPRGYNALWSKGGLMYAPPIR 342
           LK+PRG NA W+ GGL YAPPIR
Sbjct: 319 LKMPRGLNAQWNLGGLHYAPPIR 341


>gi|328950982|ref|YP_004368317.1| ABC-type transporter, periplasmic subunit family 3 [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451306|gb|AEB12207.1| ABC-type transporter, periplasmic subunit family 3 [Marinithermus
           hydrothermalis DSM 14884]
          Length = 341

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 140/338 (41%), Positives = 215/338 (63%), Gaps = 7/338 (2%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRAL 67
           +L  ++L         S +  + +RG L CG+N    GF  +    G ++GFD+DFCRA+
Sbjct: 7   LLVAVLLVGALGFAQQSRMDVVLERGKLVCGVNNVAPGFGFLNEQTGRFEGFDIDFCRAV 66

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           ++A+FDDP  ++Y+PL AK RF A+Q+ ++D++ RNT  T+ R+ S+G+ F P+ ++DGQ
Sbjct: 67  AAALFDDPDAVEYVPLTAKARFSAIQTGEVDVVFRNTTITVSRDSSVGVDFLPVNFYDGQ 126

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK-YHPIVFERVEEIDAAY 186
           G ++ K+ G++SV +L GA++C   GTTTE    D+ +A   +    + FE   ++  A+
Sbjct: 127 GVMVKKELGVTSVFELEGATVCTNQGTTTEKNWTDFVRAQGWQGGQLLTFEDFSKVFNAF 186

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + RCDA T D S L   K     P E VILP+ ISK PLA    Q D++W + ++W  Y
Sbjct: 187 ISGRCDAATTDKSGLAGWKAQASNPDEIVILPETISKEPLAGFTFQNDSKWRDALTWIVY 246

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306
           A++ AEE GIT +N+++  K + +P ++RFLG++     GE LGL  D+  RI+RH+GNY
Sbjct: 247 ALIQAEEFGITSENVDEFLK-SDSPAIRRFLGVE--GKFGEDLGLPNDFVVRILRHVGNY 303

Query: 307 GEMFDRNLGNQSELKIPR--GYNALWSKGGLMYAPPIR 342
           GE++DR+LG +S   IPR    N LW++GGL+YAPP R
Sbjct: 304 GEIYDRHLGPESPFYIPREGSLNELWTRGGLLYAPPFR 341


>gi|218550552|ref|YP_002384343.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia
           fergusonii ATCC 35469]
 gi|218358093|emb|CAQ90739.1| amino-acid transporter subunit ; periplasmic-binding component of
           ABC superfamily [Escherichia fergusonii ATCC 35469]
          Length = 305

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 148/305 (48%), Positives = 214/305 (70%), Gaps = 2/305 (0%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           CGI+ GL GF+   A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++
Sbjct: 3   CGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+LSRNT WT  R+  +G+AF  +TY+DG GF+ H K G+ S  +L GA++C+QAGT TE
Sbjct: 63  DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           L +ADYFKA+NMKY P+ F+R +E   A  + RCD    D S LYAL++    P+E ++L
Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL 182

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           P++ISK PL P + +GD EW++IV WT +AM+ AEE+G+  +N+++ + +   PD+   L
Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGVNSQNVDEKAANPATPDMAHLL 242

Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337
           G +   + G+ L L   W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y
Sbjct: 243 GKE--GDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300

Query: 338 APPIR 342
           APP+R
Sbjct: 301 APPVR 305


>gi|91763314|ref|ZP_01265278.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717727|gb|EAS84378.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1002]
          Length = 346

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 148/350 (42%), Positives = 220/350 (62%), Gaps = 12/350 (3%)

Query: 1   MYK--DFFVSILCLIILFFTS-----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M+K      S++ ++ + F        +  +  L + +K+GF++CG++ GL GF+   A 
Sbjct: 1   MFKYVKQLTSLVAMVAVLFAFTTETMAAKKSKTLKNTQKKGFVRCGVSQGLPGFSNADAA 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+W G DVD CRA+++A+  D +K+++ PL+AKERF AL S +IDILSRNT WTL R+  
Sbjct: 61  GNWTGVDVDVCRAVAAAVLGDANKVKFTPLSAKERFTALTSGEIDILSRNTTWTLSRDAD 120

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNMKYH 172
           +GL F  + ++DGQGF++ K  GI+S SQ  +G S C   GTTTEL + D+F +  + Y 
Sbjct: 121 IGLTFVGVNFYDGQGFMVRKDSGITSTSQFKNGISACTNIGTTTELNMRDFFNSKGISYE 180

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
           P+ FE+ +E+ AAY + RCD YT D S L A +     P +H++LP+ ISK PL P + Q
Sbjct: 181 PVAFEKADEVVAAYDSGRCDTYTTDKSGLAAQRTKMTNPDDHIVLPETISKEPLGPVVRQ 240

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
           GD  W +IV W+   M+ AEE GI   N + + K + NP ++R +G +    +G A GL 
Sbjct: 241 GDAVWEDIVRWSLNVMIEAEEYGINSANAD-MMKTSENPQIKRLVGSE--GELGAAFGLD 297

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            DW+ RII+ +GNYGE + RN+   + +   RG N +W+KGGL+Y PP R
Sbjct: 298 NDWSLRIIKQVGNYGESYKRNI-ADTGILPDRGPNQIWTKGGLLYVPPAR 346


>gi|74313796|ref|YP_312215.1| putative periplasmic binding transport protein [Shigella sonnei
           Ss046]
 gi|73857273|gb|AAZ89980.1| putative periplasmic binding transport protein [Shigella sonnei
           Ss046]
          Length = 305

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 148/305 (48%), Positives = 213/305 (69%), Gaps = 2/305 (0%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           CGI+ GL GF+   A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++
Sbjct: 3   CGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+LSRNT WT  R+  +G+AF  +T +DG GF+ H K G+ S  +L GA++C+QAGT TE
Sbjct: 63  DLLSRNTTWTSSRDAGMGMAFTGVTDYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           L +ADYFKA+NMKY P+ F+R +E   A  + RCD    D S LYAL++    P+E ++L
Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL 182

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI  +N+++ + +   PD+   L
Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242

Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337
           G +   + G+ L L   W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y
Sbjct: 243 GKE--GDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300

Query: 338 APPIR 342
           APP+R
Sbjct: 301 APPVR 305


>gi|293602358|ref|ZP_06684804.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292819120|gb|EFF78155.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 358

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 145/318 (45%), Positives = 217/318 (68%), Gaps = 4/318 (1%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            +  +++RG + CG  TG  GF+   A G W+G DVD CRA+++A+F D +KI+ +PLN+
Sbjct: 44  TVDVVRQRGAVACGTTTGFAGFSAPDAQGKWQGLDVDLCRAIAAAVFGDANKIKVVPLNS 103

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
           ++RF ALQS ++D+L+RNT  T  R+ +LG+    I ++DGQGF++ K  G+ S  +++G
Sbjct: 104 QQRFTALQSGEVDVLTRNTTVTQQRDTALGIIHAGINFYDGQGFLVPKSLGVKSAKEING 163

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           A+IC+Q GT+ E TLAD+ +A+N+ Y P+V E   E+  A+ A RCD ++ D S L +++
Sbjct: 164 ATICLQTGTSNENTLADWARANNVTYKPVVIETFNEVVNAFAAGRCDVFSTDASGLASIR 223

Query: 206 -LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                 P ++V+LP+IISK PL P + QGD +W NIV W+  AM+ AEE G+T KN+++ 
Sbjct: 224 ISKLQNPDDYVVLPEIISKEPLGPFVRQGDDKWLNIVRWSLSAMIEAEEYGVTSKNVDEQ 283

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
             ++ NP+++R LG+      G  LGL + W Y I++ +GNYGE FDRN+G  S LKI R
Sbjct: 284 L-NSANPNIKRILGVTPGG--GANLGLDEKWAYNIVKQVGNYGESFDRNVGEGSPLKIKR 340

Query: 325 GYNALWSKGGLMYAPPIR 342
           G NA W++GGLMYA PIR
Sbjct: 341 GLNAQWTQGGLMYALPIR 358


>gi|147674492|ref|YP_001216921.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae O395]
 gi|262169332|ref|ZP_06037024.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae RC27]
 gi|146316375|gb|ABQ20914.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae O395]
 gi|227013279|gb|ACP09489.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio cholerae O395]
 gi|262022145|gb|EEY40854.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           cholerae RC27]
          Length = 342

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 162/318 (50%), Positives = 226/318 (71%), Gaps = 3/318 (0%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
           S L  +  +GF+ CG++TGL GF+   A G+W+G DV++C+A+++A+  D +K++++PL 
Sbjct: 28  STLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEYCQAMAAAVLGDKTKVKFVPLT 87

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           AKERF ALQS +ID+LSRNT WTL R+ +LGL F  + Y+DGQGF++ K  G+ S  +L+
Sbjct: 88  AKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFMVKKDLGVKSAKELN 147

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   +    + A RCD  T D S LYAL
Sbjct: 148 GASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYAL 207

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +L  ++P   V+LP+IISK PL P + Q D +W+N+  W  YAMV AEE GIT KN++++
Sbjct: 208 RLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAMVNAEEYGITSKNVDEM 267

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
            K + NP+V+R LG+D     G  LG+  D +Y+I++ +GNYGE FDR +G+ S LKI R
Sbjct: 268 MK-SDNPEVKRILGLDGPKGTG--LGIRDDCSYQIVKQVGNYGESFDRTVGSGSPLKIDR 324

Query: 325 GYNALWSKGGLMYAPPIR 342
           G NALW+ GG MYAPPIR
Sbjct: 325 GVNALWNAGGFMYAPPIR 342


>gi|260577146|ref|ZP_05845123.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rhodobacter sp. SW2]
 gi|259020620|gb|EEW23939.1| cationic amino acid ABC transporter, periplasmic binding protein
           [Rhodobacter sp. SW2]
          Length = 339

 Score =  332 bits (850), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 157/342 (45%), Positives = 217/342 (63%), Gaps = 3/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+  L +  L   +    A  L D+K RG L CG N GL GFA   ANG+++GFD
Sbjct: 1   MKKSVFLGTLAVSGLL--AGMAAAGTLDDVKARGILNCGSNNGLTGFAAPDANGNYQGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
              C+A+++A+  D SK++++PL  + RF AL S ++D+L RN+ WT  R+  L   F  
Sbjct: 59  AALCKAIAAAVLGDASKVKFVPLTGETRFTALASGEVDVLIRNSTWTFSRDTDLKFDFVA 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ G+SS  +L GA++C+Q GTTTEL LAD+FK++NM Y P+      
Sbjct: 119 VNYYDGQGFMVKKELGVSSAKELDGATVCIQTGTTTELNLADFFKSNNMSYTPVTIADDS 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CDAYT D S L A++ T      H+ILP+IISK PL P +  GD  W +I
Sbjct: 179 EGQRQYVAGACDAYTTDASGLAAVRATLPDAENHIILPEIISKEPLGPVVRHGDNNWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT+YA+V+AEE GIT  N+ + +  TTNP+++R LG     N+G  +GL K+W  R I
Sbjct: 239 VRWTYYALVSAEENGITAANVEETASTTTNPEIKRLLGASDD-NLGAMMGLDKEWAKRAI 297

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F  NLG  + + + RG NALW++GGL YAPP R
Sbjct: 298 AAQGNYGEIFAANLGESTSIGLARGLNALWTQGGLQYAPPFR 339


>gi|218691562|ref|YP_002399774.1| amino-acid ABC transporter periplasmic-binding protein [Escherichia
           coli ED1a]
 gi|218429126|emb|CAR10069.2| amino-acid transporter subunit ; periplasmic-binding component of
           ABC superfamily [Escherichia coli ED1a]
          Length = 305

 Score =  331 bits (849), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 148/305 (48%), Positives = 214/305 (70%), Gaps = 2/305 (0%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           CGI+ GL GF+   A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++
Sbjct: 3   CGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+LSRNT WT  R+  +G+AF  +TY+DG GF+ H K G+ S  +L GA++C+QAGT TE
Sbjct: 63  DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           L +ADYFKA+NMKY P+ F+R +E   A  + RCD    D S LYAL++    P+E ++L
Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPTEWIVL 182

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI  +N+++ + +   PD+   L
Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242

Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337
           G +   + G+ L L   W + II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y
Sbjct: 243 GKE--GDYGKDLKLDNKWAFNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300

Query: 338 APPIR 342
           APP+R
Sbjct: 301 APPVR 305


>gi|39937855|ref|NP_950131.1| ABC transporter amino acid binding protein [Rhodopseudomonas
           palustris CGA009]
 gi|39651715|emb|CAE30237.1| ABC transporter, amino acid binding protein [Rhodopseudomonas
           palustris CGA009]
          Length = 344

 Score =  331 bits (849), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 169/350 (48%), Positives = 236/350 (67%), Gaps = 14/350 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFST--------NASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M+K  F + L + ++     +         +   L    +R  + CG+N GL GF+    
Sbjct: 1   MFKRTFRTGLAIGLVVAAGIAAAAITYERYDTKTLKRTIRRDAVLCGVNKGLPGFSTPDD 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G+W GFDVDFCRA+++AIFDDP+K+Q++PL+A ERF  LQS+++DILSRN+ W++ RE 
Sbjct: 61  KGNWTGFDVDFCRAVAAAIFDDPTKVQFVPLDANERFKELQSRKVDILSRNSTWSMSRET 120

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
           +  L F  + Y+DGQGF++   + I S  +L G+ +CVQ GTTT+L LADYF+A+NMKY 
Sbjct: 121 NYDLYFPAVAYYDGQGFMVPASRKIDSAVELDGSKVCVQNGTTTQLNLADYFRANNMKYQ 180

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +  E+ +++  AY+  +CD +T D+S LYAL+ T ++  +H+ILPD+ISK PLAP + Q
Sbjct: 181 EVKSEKFDDVVKAYKDGQCDTFTADVSQLYALRKTFEKSGDHIILPDVISKEPLAPVVRQ 240

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
            D +W  IV WT YAM+ AEELGIT +NI +  K +  PDV R +G +     GE LGL+
Sbjct: 241 RDDDWMMIVKWTLYAMINAEELGITSQNIGEALK-SKKPDVMRLVGTE--GAFGEDLGLS 297

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           KDW  RIIRH+GNYGE++DRN+G    L IPRG N LWS GG+ YAPPIR
Sbjct: 298 KDWAARIIRHVGNYGEVYDRNVGK---LGIPRGLNQLWSNGGIQYAPPIR 344


>gi|86135803|ref|ZP_01054382.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseobacter sp.
           MED193]
 gi|85826677|gb|EAQ46873.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseobacter sp.
           MED193]
          Length = 346

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 152/342 (44%), Positives = 218/342 (63%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +    L I   ++ +  A  L D+K RG L CG+ TGLVGFA   A+G+W+GFD
Sbjct: 9   MKNTVILG--ALTIAGLSAGAAAAGTLDDVKARGKLNCGVTTGLVGFAAPNASGEWEGFD 66

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 67  VAVCRAVAAAVLGDSNAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFTG 126

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ G+SS  +L GA++C+Q GTTTEL LAD+F+++N+ Y P+  E   
Sbjct: 127 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 186

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T + P  H +LP+IISK PL P +  GD EW ++
Sbjct: 187 EAQQQYLAGACDVYTTDASGLAATRATFEAPDAHTLLPEIISKEPLGPLVRHGDHEWGDV 246

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A+++AEELG+T  NI +++  T NP++ R LG +    +GE LGL+ DW    I
Sbjct: 247 VRWTLNALISAEELGVTSANIGEMAAGTNNPEINRLLGTE--GTLGEMLGLSADWGKNAI 304

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F  N+G  + + + RG NA W+KGGL+Y+PP R
Sbjct: 305 AAGGNYGEVFADNIGEATPIGLARGLNAQWTKGGLLYSPPFR 346


>gi|310816976|ref|YP_003964940.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein
           [Ketogulonicigenium vulgare Y25]
 gi|308755711|gb|ADO43640.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein
           [Ketogulonicigenium vulgare Y25]
          Length = 338

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 155/342 (45%), Positives = 212/342 (61%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K        +  L   +    A+ L D+K R  L CG NTGL GFA   A+G W+GFD
Sbjct: 1   MKKSLV--FCAMGALAMGTGLAQAATLDDVKARDVLNCGTNTGLAGFAAPNADGVWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  DP+K+ ++P     RF AL S +ID+LSR T WT  R++ L   F  
Sbjct: 59  VAVCRAVAAAVLGDPTKVNFVPTTGATRFTALASGEIDMLSRVTTWTFQRDVELAFDFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGFI+    G++S  +L GA++C+Q GTTTEL LAD+F+A+ + Y P+  E   
Sbjct: 119 VNYYDGQGFIVPTSLGVTSAHELDGATVCIQTGTTTELNLADFFRANGISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CDAYT D S L A + T + P +H+ILP+IISK PL P +  GD +W +I
Sbjct: 179 EGQQQYLAGACDAYTTDASGLAATRATFEAPGDHIILPEIISKEPLGPVVRHGDNQWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+ +A+V AEE GIT  NI ++S  T NP++ R LG +   N+GE LGL  +W  R I
Sbjct: 239 VRWSFFALVAAEEYGITSANIEELSAGTDNPEINRILGTE--GNLGEQLGLDAEWAKRAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F + LG  + + + RG NALW++GGL YA P R
Sbjct: 297 AAEGNYGEIFAKYLGTDTPIGLDRGLNALWTQGGLQYAMPFR 338


>gi|296533466|ref|ZP_06896047.1| cationic amino acid ABC superfamily ATP binding cassette
           transporter, periplasmic binding protein [Roseomonas
           cervicalis ATCC 49957]
 gi|296266210|gb|EFH12254.1| cationic amino acid ABC superfamily ATP binding cassette
           transporter, periplasmic binding protein [Roseomonas
           cervicalis ATCC 49957]
          Length = 350

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 162/319 (50%), Positives = 221/319 (69%), Gaps = 5/319 (1%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           ++ L  IK RG L CG+NTGL GFA+  + G W GFDV++CRAL+ A+F+D SK++Y+P 
Sbjct: 37  SATLDAIKARGTLSCGVNTGLAGFAQPDSQGRWTGFDVEYCRALAVALFNDASKVRYVPT 96

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
            A+ RF ALQS +ID+L RNT  TL R+ SLGL F  I ++DGQGF++    G+ S  +L
Sbjct: 97  TAQNRFTALQSGEIDVLPRNTTATLSRDTSLGLDFPAINFYDGQGFMVKASLGVKSAKEL 156

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            GA++CVQ GTTTE  L D+F+A+N+++ P++ ER+EE+ +AY A RCDAYT D+S L A
Sbjct: 157 DGATVCVQPGTTTEQNLTDWFRANNIRFTPVIIERLEELVSAYVAGRCDAYTTDVSGLAA 216

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
            +     P EHVILP++ISK PL PA+  GD  W ++V WTHYA++ AEE GIT  N+++
Sbjct: 217 TRSAQPNPGEHVILPEVISKEPLGPAVRHGDQRWADLVRWTHYALLAAEEFGITAANVDK 276

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323
              +   P+VQR LG  K+  +G+ LG+   W  RII+  GNYGEMF R+L   + L I 
Sbjct: 277 AVAEDQRPEVQRLLG--KTGGLGQMLGVDNAWAARIIKATGNYGEMFTRHL---TPLGIQ 331

Query: 324 RGYNALWSKGGLMYAPPIR 342
           RG NA W++GGL YA P R
Sbjct: 332 RGPNAQWTQGGLQYAQPFR 350


>gi|218560337|ref|YP_002393250.1| amino-acid transporter subunit ; periplasmic-binding component of
           ABC superfamily [Escherichia coli S88]
 gi|218367106|emb|CAR04880.1| amino-acid transporter subunit ; periplasmic-binding component of
           ABC superfamily [Escherichia coli S88]
          Length = 305

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 148/305 (48%), Positives = 214/305 (70%), Gaps = 2/305 (0%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           CGI+ GL GF+   A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++
Sbjct: 3   CGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+LSRNT WT  R+  +G+AF  +TY+DG GF+ H K G+ S  +L GA++C+QAGT TE
Sbjct: 63  DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           L +ADYFKA+NMKY P+ F+R +E   A  + RCD    D S LYAL++    P+E ++L
Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL 182

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI  +N+++ + +   PD+   L
Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242

Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337
           G +   + G+ L L   W + II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y
Sbjct: 243 GKE--GDYGKDLKLDNKWAFNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300

Query: 338 APPIR 342
           APP+R
Sbjct: 301 APPVR 305


>gi|150397777|ref|YP_001328244.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419]
 gi|150029292|gb|ABR61409.1| extracellular solute-binding protein family 3 [Sinorhizobium
           medicae WSM419]
          Length = 336

 Score =  330 bits (847), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 155/324 (47%), Positives = 228/324 (70%), Gaps = 3/324 (0%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
             +T A+ L  +K+RG L+CG++ G++GF+     G+W GFD+DFCRA+++A   D  ++
Sbjct: 16  GTATQAATLDVVKQRGELRCGVSQGVLGFSAPDDKGEWSGFDIDFCRAVAAAALGDADQV 75

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +Y+PL+ KERF ALQS ++D+LSR T WTL R+  LG++F  +TY+DGQ F++    G+ 
Sbjct: 76  KYVPLSTKERFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVGVTYYDGQAFMVRDDIGVK 135

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           SV +LSGAS+C + GTTTE  +ADYF A+ ++Y  I FE+ ++   A+ A RCD Y+ D 
Sbjct: 136 SVKELSGASVCTETGTTTEQNMADYFSANKIEYKVIAFEKADQTIQAFNAGRCDVYSTDA 195

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           SALY+ ++T + P   V+LP++ISK PL PA+ QGD +W+ +V WT +AMV AEELGIT 
Sbjct: 196 SALYSQRMTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKVVRWTLFAMVEAEELGITL 255

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
           ++   + + +     +RFLG+D  +  G ALGL  DW Y+++  +GNYGE+F+R+LG  S
Sbjct: 256 ESAASLLE-SGTVAQKRFLGVDNEA--GRALGLNPDWAYQVVSAVGNYGEIFERHLGQAS 312

Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342
            LKI RG N LW+ GGL+YAPP+R
Sbjct: 313 ALKIDRGLNKLWNAGGLIYAPPVR 336


>gi|82778575|ref|YP_404924.1| putative periplasmic binding transport protein [Shigella
           dysenteriae Sd197]
 gi|81242723|gb|ABB63433.1| putative periplasmic binding transport protein [Shigella
           dysenteriae Sd197]
          Length = 305

 Score =  330 bits (847), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 148/305 (48%), Positives = 213/305 (69%), Gaps = 2/305 (0%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           CGI+ GL  F+   A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++
Sbjct: 3   CGISDGLPRFSYADADGKFSGIDVDVCRGVAAAVFGDNTKVKYTPLTAKERFTALQSGEV 62

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+LSRNT WT  R+  +G+AF  +TY+DG GF+ H K G+ S  +L GA++C+QAGT TE
Sbjct: 63  DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           L +ADYFKA+NMKY P+ F+R +E   A  + RCD    D S LYAL++    P+E ++L
Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL 182

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI  +N+++ + +   PD+   L
Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242

Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337
           G +   + G+ L L   W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ Y
Sbjct: 243 GKE--GDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300

Query: 338 APPIR 342
           APP+R
Sbjct: 301 APPVR 305


>gi|311109014|ref|YP_003981867.1| general L-amino acid-binding periplasmic protein AapJ 3
           [Achromobacter xylosoxidans A8]
 gi|310763703|gb|ADP19152.1| general L-amino acid-binding periplasmic protein AapJ 3
           [Achromobacter xylosoxidans A8]
          Length = 338

 Score =  330 bits (847), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 149/340 (43%), Positives = 226/340 (66%), Gaps = 3/340 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   ++     +L  +  +   +    +K +GF++CG++TG+ GF+   + G W G DVD
Sbjct: 2   KALKLAAAGTALLISSLTAHAGATFEAVKSKGFVQCGVSTGVAGFSVNDSKGGWIGLDVD 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
            CRAL+  +F D SK + + ++A +RF ALQS ++D+L RNT  +L R+ +LGL    + 
Sbjct: 62  LCRALAITMFGDASKAKIMAVSALQRFTALQSGEVDVLPRNTTLSLTRDTTLGLIGVAVN 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+D QG +++K   + S  +L GA++CVQ GTTTEL LAD+F++ N+ + P+V ER++EI
Sbjct: 122 YYDSQGIMVNKSLNVKSAKELDGATVCVQPGTTTELNLADWFRSQNIVFKPVVVERLDEI 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A+   RCDA+TGD S L A +   + P ++ ILP+  SK PL P + QGD +W+N+V 
Sbjct: 182 IRAFAVGRCDAFTGDKSQLAAARSNLENPEKYDILPENFSKEPLGPMVRQGDEQWFNVVR 241

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           WT +AM+ AEE GIT KN++++ K +TNP+VQR LG+  +  +G+ LG+   W Y II++
Sbjct: 242 WTLFAMLEAEEYGITSKNVDEMLK-STNPNVQRLLGV--TPGMGKNLGVDDKWAYNIIKN 298

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGE F++NLG  S LK+PRG NA +  GGLMY  P+R
Sbjct: 299 IGNYGESFEKNLGPSSPLKLPRGLNASYRDGGLMYGWPVR 338


>gi|163745575|ref|ZP_02152935.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Oceanibulbus
           indolifex HEL-45]
 gi|161382393|gb|EDQ06802.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Oceanibulbus
           indolifex HEL-45]
          Length = 338

 Score =  330 bits (847), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 151/342 (44%), Positives = 214/342 (62%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K        L +    + +  A+ L D+K RG L CG+ TGL GFA   ANG+W+GFD
Sbjct: 1   MKKTVIFG--ALTVAGLAAGAAGAATLDDVKARGKLNCGVTTGLAGFAAPNANGEWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID L+RNT WT  R+  L   F  
Sbjct: 59  VAVCRAVAAAVLGDKNAVEFVPTTGKTRFTALASGEIDFLARNTTWTFSRDTDLKFDFIG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS   L GA++C+Q GTTTEL LAD+F+ +N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVPKALGVSSAKDLDGATVCIQTGTTTELNLADFFRKNNISYEPVPVETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T + P +H++LP+IISK PL P +  GD EW +I
Sbjct: 179 EGQQQYLAGACDTYTTDASGLAATRATFETPGDHILLPEIISKEPLGPLVRHGDNEWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             W   A++ AEELGIT  NI +++ +T NP++ R LG +    +GE +GL  +W  R I
Sbjct: 239 TRWVLNALIAAEELGITSANIEEMTGNTNNPEIARLLGTE--GTLGEMIGLDNEWAKRAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F +N+G ++ + + RG NA W+ GGL+YAPP+R
Sbjct: 297 MAEGNYGEIFAKNIGEETPIGLARGLNAQWTDGGLLYAPPVR 338


>gi|330429592|gb|AEC20926.1| putative ABC transporter periplasmic amino acid-binding protein
           [Pusillimonas sp. T7-7]
          Length = 338

 Score =  330 bits (847), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 146/340 (42%), Positives = 218/340 (64%), Gaps = 3/340 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K    + L   + F  + S        +K +GF++CG +T L GF+   + G W G D+D
Sbjct: 2   KLIKAAALGASLFFAAATSQAGETYDAVKAKGFVQCGTHTALPGFSIADSKGVWSGIDID 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
            C+A+++ +F D +K +  P+  ++RF ALQS +ID+L+RNT  T+ R+ +LGL    + 
Sbjct: 62  LCKAIATMMFGDATKFKTTPVTTQQRFTALQSGEIDVLTRNTTATMTRDTTLGLMSAGVN 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+D QG ++ K+ G+ S  +LSGA++CVQ GTTTEL LAD+F+A+N+ + P+V    +E 
Sbjct: 122 YYDSQGIMVSKELGVKSAKELSGAAVCVQPGTTTELNLADWFRANNLDFKPVVINSPDEA 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             +Y A RCDA+T D S L  ++ T   P +HVILP+  SK PL P + QGD +W+ +V 
Sbjct: 182 MRSYVAGRCDAFTTDKSGLATIRTTLANPDDHVILPEDFSKEPLGPMVRQGDDQWFMVVR 241

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           W    M+ AEE GIT KN++++ K ++NP++QR LG+  +  +G+ LGL   W Y +I+ 
Sbjct: 242 WALNTMLEAEEYGITSKNVDEMLK-SSNPNIQRILGV--TGEMGKGLGLDNKWAYNLIKQ 298

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGE F+RNLG  S +K+ RG NA W  GGLMY  PIR
Sbjct: 299 VGNYGESFERNLGAGSAMKLERGINAQWRDGGLMYGWPIR 338


>gi|86751771|ref|YP_488267.1| extracellular solute-binding protein [Rhodopseudomonas palustris
           HaA2]
 gi|86574799|gb|ABD09356.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas
           palustris HaA2]
          Length = 341

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 164/320 (51%), Positives = 226/320 (70%), Gaps = 6/320 (1%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +   L    +R  + CG+N GL GF+     G+W GFDVDFCRA+++AIF+DP+K++++P
Sbjct: 28  DTKTLKRTIRRDAVLCGVNKGLPGFSTPDEKGNWTGFDVDFCRAVAAAIFNDPNKVKFVP 87

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           L+A ERF  LQS+++DILSRN+ W++ RE    L F  + Y+DG+GF++   + I +  +
Sbjct: 88  LDANERFKELQSRKVDILSRNSTWSMSREAGYELYFPAVAYYDGEGFMVPSSRKIETALE 147

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G+ +CVQAGTTT L LADYF+A+NMKY  + F +++E+ AAY + +CD ++ D S LY
Sbjct: 148 LDGSKVCVQAGTTTLLNLADYFRANNMKYQEVKFPKLDEVVAAYNSGQCDTFSADASQLY 207

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           AL+ T  +P +HVILPD+ISK PLAP + Q D EW  IV W+ YAM+ AEELG+T  NI+
Sbjct: 208 ALRQTLAKPGDHVILPDLISKEPLAPVVRQRDDEWMMIVKWSLYAMINAEELGVTSANID 267

Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322
           +  K +  PDV R +G +     GE LGL+KDW  RIIRH+GNYGE++DRN+G    L I
Sbjct: 268 EALK-SKKPDVMRLVGTE--GAYGEELGLSKDWAARIIRHVGNYGEVYDRNVGK---LGI 321

Query: 323 PRGYNALWSKGGLMYAPPIR 342
           PRG N LWS GG+ YAPPIR
Sbjct: 322 PRGLNQLWSAGGIQYAPPIR 341


>gi|209883786|ref|YP_002287643.1| general L-amino acid-binding periplasmic protein AapJ [Oligotropha
           carboxidovorans OM5]
 gi|209871982|gb|ACI91778.1| general L-amino acid-binding periplasmic protein AapJ [Oligotropha
           carboxidovorans OM5]
          Length = 349

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 158/320 (49%), Positives = 224/320 (70%), Gaps = 3/320 (0%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +   L    +RG ++CG+N GL GF+   A+G+W GFDVD CRA+++AIFDDP+K+ ++P
Sbjct: 33  DTQTLKRTLRRGAVQCGVNAGLPGFSNKDASGNWSGFDVDICRAVAAAIFDDPTKVNFVP 92

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           L+  +RF  LQ++ +DILSRN+ W++ RE+   L F  ++Y+DG+GF++ + + + S  +
Sbjct: 93  LDTNQRFKELQNRTVDILSRNSTWSMSREVDYELTFAAVSYYDGEGFMLRRSRNVDSALE 152

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G  ICVQ+ TTT+L LADYF+A+NM Y  + F  V ++  AY + +CD  T D S LY
Sbjct: 153 LGGTRICVQSDTTTQLNLADYFRANNMTYDEMKFGNVGDLLKAYESGQCDVLTTDTSQLY 212

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           A +LT  +P +HVIL DIISK PLAP + Q D +W  IV W  YAM+ AEELG++ KNI+
Sbjct: 213 AYRLTLAKPDDHVILADIISKEPLAPVVRQRDDQWMLIVKWAVYAMLNAEELGVSSKNID 272

Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322
           +  K +  PDV R +G +   + GEALGLT DW  R+IRH+GNY E+++RN+G  S+L I
Sbjct: 273 EALK-SKKPDVMRLVGTE--GSYGEALGLTNDWAARVIRHVGNYSEVYERNVGVSSKLGI 329

Query: 323 PRGYNALWSKGGLMYAPPIR 342
           PRG N LW+ GG+ YAPPIR
Sbjct: 330 PRGLNQLWNAGGIQYAPPIR 349


>gi|148252293|ref|YP_001236878.1| general L-amino acid-binding periplasmic protein [Bradyrhizobium
           sp. BTAi1]
 gi|146404466|gb|ABQ32972.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 345

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 163/317 (51%), Positives = 228/317 (71%), Gaps = 3/317 (0%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L    +RG + CG+N GL GF+     G+W GFDVDFCRA+++AIFDDP K +++PL+A
Sbjct: 32  TLKRTVRRGEVLCGVNAGLPGFSIPDDKGNWTGFDVDFCRAVAAAIFDDPKKAKFVPLDA 91

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
            ERF  LQS+++DILSRNT W++ RE +  L F  + Y+DGQGF++ + + + +   L+G
Sbjct: 92  NERFKELQSRKVDILSRNTTWSMAREQNYDLYFPAVAYYDGQGFMVPRSRKLETALDLNG 151

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           + +CVQ  TT  L LADYF+A+NMKY  I F +++++  AY + +CD +T D+S LYAL+
Sbjct: 152 SKVCVQDSTTNALNLADYFRANNMKYEEIKFLKLDDVLKAYDSGKCDTFTADVSQLYALR 211

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           L   +P++H ILPD+ISK PLAP + Q D +W  IV WT YAM+ AEELG+T KNI++  
Sbjct: 212 LVLTKPNDHDILPDMISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGVTSKNIDEAL 271

Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325
           K +  PDV R +G +     G+ LGL KDW  RIIRH+GNYGE+++RN+G++S+LKIPRG
Sbjct: 272 K-SKKPDVMRLVGNE--GTYGQDLGLAKDWAARIIRHVGNYGEVYERNIGSESKLKIPRG 328

Query: 326 YNALWSKGGLMYAPPIR 342
            N LW+ GG+ YAPPIR
Sbjct: 329 MNQLWNAGGIQYAPPIR 345


>gi|192293640|ref|YP_001994245.1| extracellular solute-binding protein family 3 [Rhodopseudomonas
           palustris TIE-1]
 gi|192287389|gb|ACF03770.1| extracellular solute-binding protein family 3 [Rhodopseudomonas
           palustris TIE-1]
          Length = 344

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 167/350 (47%), Positives = 235/350 (67%), Gaps = 14/350 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFST--------NASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M+K  F + L + ++     +         +   L    +R  + CG+N GL GF+    
Sbjct: 1   MFKRTFRTGLAIGLVVAAGIAAAAITYERYDTKTLKRTIRRDAVLCGVNKGLPGFSTPDD 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G+W GFDVDFCRA+++AIFDDP+K+Q++PL+A ERF  LQS+++DILSRN+ W++ RE 
Sbjct: 61  KGNWTGFDVDFCRAVAAAIFDDPTKVQFVPLDANERFKELQSRKVDILSRNSTWSMSRET 120

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
           +  L F  + Y+DGQGF++   + I S  +L G+ +CVQ GTTT+L LADYF+ +NMKY 
Sbjct: 121 NYDLYFPAVAYYDGQGFMVPASRKIDSAVELDGSKVCVQNGTTTQLNLADYFRTNNMKYQ 180

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +  E+ +++  AY+  +CD +T D+S LYAL+ T ++  +H+ILPD+ISK PLAP + Q
Sbjct: 181 EVKSEKFDDVVKAYKDGQCDTFTADVSQLYALRKTFEKSGDHIILPDVISKEPLAPVVRQ 240

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
            D +W  IV WT YAM+ AEELGIT +NI +  K +  PDV R +G +     GE LGL+
Sbjct: 241 RDDDWMMIVKWTLYAMINAEELGITSQNIGEALK-SKKPDVMRLVGTE--GAFGEDLGLS 297

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           KDW  R+IRH+GNYGE++DRN+G    L IPRG N LWS GG+ YAPPIR
Sbjct: 298 KDWAARVIRHVGNYGEVYDRNVGK---LGIPRGLNQLWSNGGIQYAPPIR 344


>gi|146343600|ref|YP_001208648.1| general L-amino acid-binding periplasmic protein [Bradyrhizobium
           sp. ORS278]
 gi|146196406|emb|CAL80433.1| General L-amino acid-binding periplasmic protein [Bradyrhizobium
           sp. ORS278]
          Length = 345

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 160/317 (50%), Positives = 226/317 (71%), Gaps = 3/317 (0%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L    +RG + CG+N GL GF+     G+W GFDVDFCRA+++AIFDDP K +++PL+A
Sbjct: 32  TLKRTVRRGEVLCGVNAGLPGFSIPDDKGNWTGFDVDFCRAVAAAIFDDPKKARFVPLDA 91

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
            ERF  LQS+++DILSRNT W++ RE +  L F  + Y+DGQGF++ + + + +   L+G
Sbjct: 92  SERFKELQSRKVDILSRNTTWSMAREQNYDLYFPAVAYYDGQGFMVPRARKLETALDLNG 151

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           + +CVQ  TT  L L DYF+A+NMKY  +   +++++  AY + +CD +T D+S LYAL+
Sbjct: 152 SKVCVQDSTTNALNLGDYFRANNMKYEEVKLPKLDDVLKAYDSGKCDTFTADVSQLYALR 211

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           L   +P +H ILPD+ISK PLAP + Q D +W  IV WT YAM+ AEELG+T KNI++  
Sbjct: 212 LVLTKPGDHDILPDLISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGVTSKNIDEAL 271

Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325
           K +  PDV R +G +     G+ LGL+KDW  RIIRH+GNYGE+++RN+G++S+LKIPRG
Sbjct: 272 K-SKKPDVMRLVGNE--GTYGQDLGLSKDWAARIIRHVGNYGEVYERNVGSESKLKIPRG 328

Query: 326 YNALWSKGGLMYAPPIR 342
            N LW+ GG+ YAPPIR
Sbjct: 329 MNQLWNAGGIQYAPPIR 345


>gi|293605353|ref|ZP_06687737.1| general amino acid ABC superfamily ATP binding cassette
           transporter, binding protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292816245|gb|EFF75342.1| general amino acid ABC superfamily ATP binding cassette
           transporter, binding protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 338

 Score =  329 bits (844), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 150/343 (43%), Positives = 219/343 (63%), Gaps = 6/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K F  + +   +L   S +        +KK+GFL+CG   G+ GF+ + + G+W G D
Sbjct: 1   MRK-FLTTAVAATLLCVASGAQAGVTFDAVKKKGFLQCG-FAGIPGFSVLDSKGEWTGLD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A+F D SK++   L A+ +F ALQS +ID+LSRNT  TL R+ +LGL    
Sbjct: 59  VDMCRAVAAAMFGDASKVKGNVLTAQAKFTALQSGEIDMLSRNTTQTLTRDTTLGLIGVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + ++D QG I+ K   + SV +L GA+ICVQ GTTTEL LADYF++  + + P++ E  +
Sbjct: 119 VNFYDAQGLIVKKSMNVKSVKELDGATICVQPGTTTELNLADYFRSRGLTFKPVLVENYD 178

Query: 181 EIDAAYRAHRCDAYTGDISALYA-LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E      + RCDAYT D S   A ++    +P +  IL + +SK PL P + QGD +W+N
Sbjct: 179 ENFRLLESGRCDAYTNDKSNTAANMRTRLAKPEDWEILSENLSKEPLGPMVRQGDEQWFN 238

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           +V W+  AM+ AEE GIT KN++++ K +TNP+VQR LG+  +  +G+ LGL   W Y I
Sbjct: 239 VVRWSLNAMLEAEEYGITSKNVDEMLK-STNPNVQRILGV--TPGMGKNLGLDDKWAYNI 295

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNYGE +DR +G  S LK+ RG N  W++GGLMY  P+R
Sbjct: 296 IKQVGNYGESYDRAMGKDSPLKLERGLNKQWTQGGLMYGWPVR 338


>gi|330814052|ref|YP_004358291.1| glutamate Aspartate periplasmic binding protein precursor GltI
           [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487147|gb|AEA81552.1| glutamate Aspartate periplasmic binding protein precursor GltI
           [Candidatus Pelagibacter sp. IMCC9063]
          Length = 343

 Score =  329 bits (844), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 150/346 (43%), Positives = 221/346 (63%), Gaps = 7/346 (2%)

Query: 1   MYK-DFFVSILCLIILFFTS--FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M    F VSI  +++L       +   S L   K +GF+KCG++ GL GF+   A+G+W 
Sbjct: 1   MKIIKFAVSIFAVLLLAACGNESAKKTSTLDTTKSQGFVKCGVSQGLPGFSNADASGNWA 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DVD CRA+++A+  D +K++Y PL+AKERF ALQ+  ID+LSRNT WTL R+ ++GL 
Sbjct: 61  GMDVDVCRAVAAAVLGDATKVKYTPLSAKERFTALQAGDIDVLSRNTTWTLERDAAIGLE 120

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
           F  + ++DGQGF++ KK GI SV     G  +C   GTTTEL +AD+FKA  + Y P+VF
Sbjct: 121 FVGVNFYDGQGFMVRKKSGIKSVKDFQNGTKVCTNTGTTTELNMADFFKAAGVSYEPVVF 180

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E+ +E+  AY + RCD YT D S L + +     P +H++LP+ ISK PL P + +GD  
Sbjct: 181 EKADEVVQAYDSGRCDTYTTDKSGLASQRTKLTAPDDHIVLPETISKEPLGPVVREGDAT 240

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296
           W ++V W+    + AEE G+  +NI+ +  D+ NP +QR +G + + N G AL L + W+
Sbjct: 241 WADVVRWSLNVWIEAEEYGVNSENIDSMM-DSKNPAIQRIVGAEGTKN-GAALNLDQKWS 298

Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           Y +I+ +GNY E + RNL   + +   RG NALW+ GG++Y PP+R
Sbjct: 299 YNLIKQVGNYAESYKRNL-ADTGIMPDRGPNALWTNGGILYVPPVR 343


>gi|159042874|ref|YP_001531668.1| glutamate/glutamine/aspartate/asparagine ABC transporter
           [Dinoroseobacter shibae DFL 12]
 gi|157910634|gb|ABV92067.1| glutamate/glutamine/aspartate/asparagine ABC transporter
           [Dinoroseobacter shibae DFL 12]
          Length = 338

 Score =  329 bits (843), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 153/342 (44%), Positives = 221/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K        L      +    A  L +++ RG + CGI+TGLVGFA   ANG+W+GFD
Sbjct: 1   MKKSVL--FGALAAAGLAATGAAADTLEEVQARGAVNCGISTGLVGFASQDANGEWQGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+F DP+ + + P+  + RF  L S +ID+L+RNT WT  R++ L L F  
Sbjct: 59  VAVCRAVAAAVFGDPTAVNFNPVTNQVRFEVLNSGEIDMLARNTTWTFSRDVDLKLEFTG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y+DGQGF++ K  G+SS ++L GA++C+Q GTTTEL LAD+F+A+N+ + P+      
Sbjct: 119 INYYDGQGFMVPKALGVSSATELDGATVCIQKGTTTELNLADFFRANNISFEPVPISTAS 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + + + P EHV+LP+IISK PL P +  GD EW +I
Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRASFESPDEHVVLPEIISKEPLGPLVRHGDNEWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  A++ AEELG+T  N+ +++  T NP++ R LG +   N+GE LGL+ DW   +I
Sbjct: 239 VRWTLNALIAAEELGVTSANVAELAAGTDNPEINRLLGTE--GNLGEQLGLSADWAVNVI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +  GNYGE+F+ ++G  + + + RG NA W++GGL+YAPP R
Sbjct: 297 KAGGNYGEIFETHIGENTPIGLARGLNAQWTEGGLLYAPPFR 338


>gi|154245585|ref|YP_001416543.1| extracellular solute-binding protein [Xanthobacter autotrophicus
           Py2]
 gi|154159670|gb|ABS66886.1| extracellular solute-binding protein family 3 [Xanthobacter
           autotrophicus Py2]
          Length = 337

 Score =  328 bits (842), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 148/315 (46%), Positives = 209/315 (66%), Gaps = 3/315 (0%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
             +K RG L CG++ GL GF+   A+G W GFDVD CR L++AIF+DP+K++++PL+A E
Sbjct: 26  KTVKDRGELVCGVSKGLPGFSAPDASGKWTGFDVDVCRGLAAAIFNDPNKVKFVPLSADE 85

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           RF AL    +D+LSRN+ WTL RE  LGL F  I Y+DGQGF++   + ++S  +L  + 
Sbjct: 86  RFPALTKGDVDMLSRNSTWTLEREAKLGLLFTAINYYDGQGFLVRDARKVTSALELDKSK 145

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +CVQAGTT E    DYF A+ M    +      ++  AY   +CD  T D+S LYAL+LT
Sbjct: 146 VCVQAGTTAEDNTKDYFAANGMTLELVTLPTSTDLVKAYEEGKCDTLTTDVSQLYALRLT 205

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
             +P +H++LPD+ISK PL P + QGD +W+N+V WT + M+ AEELG++   I+     
Sbjct: 206 MAKPGDHIVLPDVISKEPLGPVVRQGDDQWFNLVKWTIFGMINAEELGVSTTTIDAALA- 264

Query: 268 TTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYN 327
           +  P+V R +G D     GE LG++ D+  RI++ +GNYGE F+RN+G  S+L IPRG N
Sbjct: 265 SKKPEVIRLVGND--GKFGEQLGVSNDFVVRIVKAVGNYGESFERNVGAASKLGIPRGIN 322

Query: 328 ALWSKGGLMYAPPIR 342
            LWS GG+ YAPP+R
Sbjct: 323 QLWSMGGIQYAPPVR 337


>gi|91978841|ref|YP_571500.1| extracellular solute-binding protein [Rhodopseudomonas palustris
           BisB5]
 gi|91685297|gb|ABE41599.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas
           palustris BisB5]
          Length = 341

 Score =  328 bits (841), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 162/320 (50%), Positives = 223/320 (69%), Gaps = 6/320 (1%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +   L    +R  + CG+N GL GF+     G+W GFDVDFCRA+++AIF+DP+K++++P
Sbjct: 28  DTKTLKRTIRRDAVLCGVNKGLPGFSTPDDKGNWSGFDVDFCRAVAAAIFNDPNKVKFVP 87

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           L+A ERF  LQS+++DILSRN+ W++ RE    L F  + Y+DGQGF+    + + +  +
Sbjct: 88  LDANERFKELQSRKVDILSRNSTWSMSRETGYELYFPAVAYYDGQGFMAPAARKVETALE 147

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L G+ +CVQ GTTT L LAD+F+ +NMKY  + F +++E+ +AY+  +CD +T D S LY
Sbjct: 148 LDGSKVCVQEGTTTLLNLADFFRTNNMKYQEVKFGKLDEVVSAYKNGQCDTFTADASQLY 207

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           AL+ T D+P +HVILPD+ISK PLAP + Q D +W  IV WT YAM+ AEELGIT  NI+
Sbjct: 208 ALRQTLDKPGDHVILPDLISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGITSINID 267

Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322
           +  K +  PDV R +G +     GE LGL KDW  RIIRH+GNYGE++DRN+G    L I
Sbjct: 268 EALK-SKKPDVMRLVGTE--GTYGEELGLPKDWAARIIRHVGNYGEIYDRNVGK---LGI 321

Query: 323 PRGYNALWSKGGLMYAPPIR 342
           PRG N LW+ GG+ YAPPIR
Sbjct: 322 PRGLNQLWNAGGIQYAPPIR 341


>gi|27376134|ref|NP_767663.1| amino acid binding protein [Bradyrhizobium japonicum USDA 110]
 gi|27349273|dbj|BAC46288.1| bll1023 [Bradyrhizobium japonicum USDA 110]
          Length = 345

 Score =  328 bits (841), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 156/317 (49%), Positives = 228/317 (71%), Gaps = 3/317 (0%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L    +RG + CG+N GL GF+     G+W GFDVDFCRA+++AIF+DP+K +++ L+A
Sbjct: 32  TLKRTVRRGEVLCGVNKGLPGFSIPDDKGNWTGFDVDFCRAVAAAIFNDPAKAKFVALDA 91

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
            ERF  LQS+++DILSRN+ W++ RE+   L F  + Y+DG GF++ + +   +   L+G
Sbjct: 92  SERFKELQSRKVDILSRNSTWSMARELDYDLYFPAVAYYDGAGFMLPRSRNKETSLDLTG 151

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           + +CVQ GTTT L ++DYF+A+NMKY  + F++++++  AY   +CD  + D+S LYAL+
Sbjct: 152 SKVCVQTGTTTALNVSDYFRANNMKYEEVKFDKLDDVVKAYDTGKCDTLSADVSQLYALR 211

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
           L   +P +H+ILPD+ISK PLAP + Q D +W  IV WT YAM+ AEELG++ +NI++  
Sbjct: 212 LNLSKPGDHMILPDMISKEPLAPVVRQRDDDWMMIVKWTLYAMINAEELGVSSENIDEAL 271

Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325
           K +  P+V R +G +   N GE LGLTKDW  RIIR++GNYGEM++RN+G +S+LKIPRG
Sbjct: 272 K-SKKPEVMRLVGTE--GNYGEQLGLTKDWVVRIIRNVGNYGEMYERNIGEKSKLKIPRG 328

Query: 326 YNALWSKGGLMYAPPIR 342
            N LW+ GG+ YAPP+R
Sbjct: 329 MNQLWNAGGVQYAPPMR 345


>gi|320184061|gb|EFW58881.1| Glutamate Aspartate periplasmic binding protein precursor GltI
           [Shigella flexneri CDC 796-83]
          Length = 349

 Score =  328 bits (841), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 157/351 (44%), Positives = 234/351 (66%), Gaps = 11/351 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL+GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLLGFSYADADGKFSGI 60

Query: 60  DVDF--------CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLRE 111
           DVD         CR++++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+
Sbjct: 61  DVDVDVDVDVDVCRSVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRD 120

Query: 112 ISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
             +G+AF  +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY
Sbjct: 121 AGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKY 180

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
            P+ F+R +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + 
Sbjct: 181 TPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVR 240

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGL 291
           +GD EW++IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   + G+ L L
Sbjct: 241 RGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--GDYGKDLKL 298

Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 DNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 349


>gi|326794954|ref|YP_004312774.1| ABC-type transporter periplasmic subunit family 3 [Marinomonas
           mediterranea MMB-1]
 gi|326545718|gb|ADZ90938.1| ABC-type transporter, periplasmic subunit family 3 [Marinomonas
           mediterranea MMB-1]
          Length = 343

 Score =  328 bits (841), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 136/345 (39%), Positives = 213/345 (61%), Gaps = 5/345 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K   + IL   +    S++   AS L ++K RG++ C I     GF  +   G+W+G 
Sbjct: 1   MKKATSLLILASSMFSAASYAAETASTLDEVKSRGYMNCVIGNSFPGFYSLNKEGEWQGM 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D CR++S+A+F D SK+++LP+   + F +++S + D+LS+   WTL R+   GL F 
Sbjct: 61  DIDMCRSVSAAVFGDSSKVKFLPVQWAQSFTSIKSGKGDMLSKGMTWTLSRDTQQGLDFL 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              ++DGQGF++ K  G+ SV  L GA++CV  GT++EL +AD+ +A+N+    +VF+  
Sbjct: 121 DTYFYDGQGFMVRKDLGVDSVYDLEGATVCVLTGTSSELNIADFSRANNLDLKTVVFDDS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
              + A+    CDA T D S L A +     P ++++LP+ ISK  L+ A+ Q D+EW N
Sbjct: 181 SVRNTAFFNDNCDALTNDKSGLAAQRSAAQNPDDYIVLPETISKEALSFAVKQNDSEWAN 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           +V WT  AMV AEE GIT  N++Q+  ++ +P V+R LG++   N+   LGL +DW Y++
Sbjct: 241 VVKWTFAAMVAAEEYGITSDNVDQMRSESNSPVVRRLLGVE--GNLNTGLGLPQDWAYQV 298

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPR--GYNALWSKGGLMYAPPIR 342
           I+ +GNYGE+++RN+G  S L + R    NALW  GG+MYA   R
Sbjct: 299 IKSVGNYGEVYERNVGPNSVLGLKREGTLNALWKDGGMMYAKSFR 343


>gi|187479528|ref|YP_787553.1| L-amino acid ABC transporter substrate-binding protein [Bordetella
           avium 197N]
 gi|115424115|emb|CAJ50668.1| L-amino acid ABC transporter, substrate-binding protein [Bordetella
           avium 197N]
          Length = 338

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 148/321 (46%), Positives = 225/321 (70%), Gaps = 3/321 (0%)

Query: 22  TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL 81
              +   ++KK+GF++CG++TG+ GF+   + G+WKG DVD CRA+++A+F D SK +  
Sbjct: 21  QAGTTFDNVKKKGFVQCGVSTGIPGFSIADSKGEWKGLDVDLCRAVAAAMFGDASKFKVT 80

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           PLN ++RF ALQS ++D+L+RNT  TL R+ +LGLA   + Y+D QG ++ K  G+ S  
Sbjct: 81  PLNTQQRFTALQSGEVDVLTRNTTLTLSRDTTLGLADVAVNYYDSQGVMVSKDLGVKSAK 140

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           +L GA++CVQ GTTTEL LAD+F+++N+++ P+V ++ +EI  A+ A RCDA+T D S L
Sbjct: 141 ELGGATVCVQPGTTTELNLADWFRSNNIEFKPVVIDKYDEIVRAFSAGRCDAFTTDKSQL 200

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
            + + T ++P  +VILP+  SK PL P + QGD +W+N++ WT  AM+ AEE GIT KN+
Sbjct: 201 ASTRTTLEKPDNYVILPEDFSKEPLGPMVRQGDEQWFNMIRWTLTAMIEAEEYGITSKNV 260

Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
            +++K + NP++QR LG+  +  +G+ LG+   W Y I++ +GNYGE F+ NLG  S +K
Sbjct: 261 EEMTK-SGNPNIQRILGV--TPGMGKNLGVDDKWAYNIVKQVGNYGESFEANLGKNSPMK 317

Query: 322 IPRGYNALWSKGGLMYAPPIR 342
           + RG NA +  GGLMY  PIR
Sbjct: 318 LERGMNASYKHGGLMYGWPIR 338


>gi|260426367|ref|ZP_05780346.1| glutamate/glutamine/aspartate/asparagine-binding protein
           bztAprecursor [Citreicella sp. SE45]
 gi|260420859|gb|EEX14110.1| glutamate/glutamine/aspartate/asparagine-binding protein
           bztAprecursor [Citreicella sp. SE45]
          Length = 339

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 149/343 (43%), Positives = 215/343 (62%), Gaps = 5/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   +    L +    + +  A+ L D+K RG L CG++TGL GF+   ANG W+GFD
Sbjct: 1   MKKTVILG--ALTVAGLAAGAAGAATLDDVKARGSLNCGVSTGLTGFSAPDANGVWQGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  DP  ++++P   + RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VAVCRAVAAAVLGDPMAVEFVPTTGQTRFTALASGEIDVLARNTTWTFSRDVDLKFEFIG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS  +L GA++C+Q GTTTEL LAD+F+ +N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVPKALGVSSAKELDGATVCIQTGTTTELNLADFFRVNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + + + P +HVILP+IISK PL P +  GD+EW +I
Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRASFEAPGDHVILPEIISKEPLGPLVRHGDSEWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDT-TNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           V WT  A+V AEE G+T  NI ++S     NP++ R LG +    +G   GL  DW  + 
Sbjct: 239 VRWTLNALVAAEEYGVTSANIGELSAAPGNNPEINRLLGTE--GELGAMFGLEADWAKKA 296

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I   GNYGE+F++ +G  + + + RG NA W++GGL+Y+PP R
Sbjct: 297 IMANGNYGEIFEKTIGENTPIGLSRGLNAQWTEGGLLYSPPFR 339


>gi|159028157|emb|CAO89764.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 351

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 147/326 (45%), Positives = 209/326 (64%), Gaps = 6/326 (1%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           T+ S +A  L  +K RG L CGIN  + GF+ V   G++ G DV  CRA+++A+FDDP+K
Sbjct: 31  TANSPSADRLQTVKNRGKLICGINGEVPGFSFVNEKGEYSGLDVQICRAIAAALFDDPAK 90

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++Y  L+ +ERF A+Q+ ++DILSRNT WT+ R+ +LG+ F    ++DGQG +  K   I
Sbjct: 91  VEYRKLSPQERFTAVQTGEVDILSRNTTWTINRDTALGMEFITPVFYDGQGIMATKASNI 150

Query: 138 SSVSQLSGASICVQAGTTTELTLAD-YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
             +  LSG SICV +GTTTE  LAD   KA    Y PIV + VE +  AY+A RC A T 
Sbjct: 151 KKLEDLSGKSICVLSGTTTEQNLADAMAKAAVQGYKPIVSDDVEALYTAYQAGRCQAVTS 210

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           D S L A +    RP +H +L  +ISK PLAPA+  GD  W N V    ++++  EE GI
Sbjct: 211 DRSQLVARRSVFPRPQDHQLLEVVISKEPLAPAVADGDPAWSNAVRSIVFSLIQGEEFGI 270

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
             +NI     D+ +P ++RFLGID+   +GE +GL  D+  R+++ +GNYGE++DR +G 
Sbjct: 271 NSQNIATF-ADSKDPSIRRFLGIDE--KLGEDMGLPNDFAQRVLKQVGNYGEIYDREIGQ 327

Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342
              L++ RG N LW+KGGL+Y+PP R
Sbjct: 328 --PLQLDRGLNNLWTKGGLLYSPPFR 351


>gi|166368449|ref|YP_001660722.1| amino acid transport system substrate-binding protein [Microcystis
           aeruginosa NIES-843]
 gi|166090822|dbj|BAG05530.1| amino acid transport system substrate-binding protein [Microcystis
           aeruginosa NIES-843]
          Length = 351

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 147/326 (45%), Positives = 209/326 (64%), Gaps = 6/326 (1%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           T+ S +A  L  +K RG L CGIN  + GF+ V   G++ G DV  CRA+++A+FDDPSK
Sbjct: 31  TANSPSADRLQTVKNRGKLICGINGEVPGFSFVNEKGEYSGLDVQICRAIAAALFDDPSK 90

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           ++Y  L+ +ERF A+Q+ ++DILSRNT WT+ R+ +LG+ F    ++DGQG +  K   +
Sbjct: 91  VEYRKLSPQERFTAVQTGEVDILSRNTTWTINRDTALGMEFITPVFYDGQGIMATKASNV 150

Query: 138 SSVSQLSGASICVQAGTTTELTLAD-YFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
             +  LSG SICV +GTTTE  LAD   KA    Y PIV + VE +  AY+A RC A T 
Sbjct: 151 KKLEDLSGKSICVLSGTTTEQNLADAMAKAAVQGYKPIVSDDVEALYTAYQAGRCQAVTS 210

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           D S L A +    RP +H +L  +ISK PLAPA+  GD  W N V    ++++  EE GI
Sbjct: 211 DRSQLVARRSVFPRPQDHQLLEVVISKEPLAPAVADGDPAWSNAVRSIVFSLIQGEEFGI 270

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
             +NI     D+ +P ++RFLGID+   +GE +GL  D+  R+++ +GNYGE++DR +G 
Sbjct: 271 NSQNIATF-ADSKDPSIRRFLGIDE--KLGEDMGLPNDFAQRVLKQVGNYGEIYDREIGK 327

Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342
              L++ RG N LW+KGGL+Y+PP R
Sbjct: 328 --PLQLDRGLNNLWTKGGLLYSPPFR 351


>gi|30064596|ref|NP_838767.1| putative periplasmic binding transport protein [Shigella flexneri
           2a str. 2457T]
 gi|56480353|ref|NP_709270.2| putative periplasmic binding transport protein [Shigella flexneri
           2a str. 301]
 gi|30042855|gb|AAP18578.1| putative periplasmic binding transport protein [Shigella flexneri
           2a str. 2457T]
 gi|56383904|gb|AAN44977.2| putative periplasmic binding transport protein [Shigella flexneri
           2a str. 301]
 gi|313648492|gb|EFS12934.1| general L-amino acid-binding periplasmic protein aapJ [Shigella
           flexneri 2a str. 2457T]
          Length = 305

 Score =  327 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 147/305 (48%), Positives = 212/305 (69%), Gaps = 2/305 (0%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           CGI+ GL  F+   A+G + G DVD CR +++A+F D +K++Y PL AKERF ALQS ++
Sbjct: 3   CGISDGLPRFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+LSRNT WT  R+  +G+AF  +TY+DG GF+ H K G+ S  +L GA++C+QAGT TE
Sbjct: 63  DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           L +ADYFKA+NMKY P+ F+R +E   A  + RCD    D S LYAL++    P+E ++L
Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL 182

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           P++ISK PL P + +GD EW++IV WT +AM+ AEE+GI  +N+++ + +   PD+   L
Sbjct: 183 PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLL 242

Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337
           G +   + G+ L L   W Y II+ + NY E+F+RN+G++S LKI RG N LW+ GG+ Y
Sbjct: 243 GKE--GDYGKDLKLDNKWAYNIIKQVSNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300

Query: 338 APPIR 342
           APP+R
Sbjct: 301 APPVR 305


>gi|85703851|ref|ZP_01034954.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseovarius sp.
           217]
 gi|85671171|gb|EAQ26029.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseovarius sp.
           217]
          Length = 339

 Score =  327 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 154/343 (44%), Positives = 222/343 (64%), Gaps = 5/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F+    L +    + ++ A+ L D+K RG L CG+ TGLVGFA   ANG W+GFD
Sbjct: 1   MKKTVFLG--ALTVAGLAAGASAAATLDDVKARGKLNCGVTTGLVGFAAPDANGVWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+L+RNT WT  R+  L   F  
Sbjct: 59  VAVCRAVAAAVLSDANAVEFVPTTGKTRFTALASGEIDMLARNTTWTFSRDTDLKFDFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K  G+SS  +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+  E   
Sbjct: 119 VNYYDGQGFLVPKSLGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L + +   + P++HVILP+IISK PL P +  GD +W +I
Sbjct: 179 EGQQQYLAGACDTYTTDASGLASTRAAFESPTDHVILPEIISKEPLGPLVRHGDNDWADI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQV-SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           V WT YA+V AEE+GIT  NI ++ +    NP++ R LG +   ++G  +GL  +W  R 
Sbjct: 239 VRWTFYALVAAEEMGITSANIGELSAAAGDNPEINRILGTE--GDLGAMIGLDNEWAKRA 296

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I   GNYGE+F++N+G ++ + + RG NA W++GG+MYAPP R
Sbjct: 297 IAASGNYGEIFEKNIGEKTPIGLARGLNAQWTQGGIMYAPPFR 339


>gi|227325810|ref|ZP_03829834.1| Extracellular solute-binding protein, family 3 precursor
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 350

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 137/353 (38%), Positives = 208/353 (58%), Gaps = 14/353 (3%)

Query: 1   MYKDFFVSILCLIILF----------FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEV 50
           M +         ++              + + N   L  IK RG L CG++    GF+ +
Sbjct: 1   MLRKLLSLTTATVLTLGSLLLPVAQATAADAGNGETLKKIKARGELVCGVHPARHGFSAI 60

Query: 51  KANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
            + G W G DVD+CRAL++AIF D +K+++  L+  +RF A+QS ++D+LSRN    L R
Sbjct: 61  DSKGQWTGLDVDYCRALAAAIFGDANKVRFAALSTAQRFPAIQSGEVDVLSRNITADLSR 120

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK 170
           + SLGL F P T++ G GF++     +  V  L GA++C+  G++TE  +A  F + N+ 
Sbjct: 121 DTSLGLNFAPPTFYTGTGFMVRTSANVKKVEDLDGATVCITPGSSTERNVAQIFASRNLH 180

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPA 229
           Y P+V E  +E  AAY + RCD    D  AL  ++    ++PS+HVILP I SK PLA A
Sbjct: 181 YTPVVIENNKEYVAAYLSGRCDVIARDKVALPGVRTFDAEKPSDHVILPGIYSKEPLAMA 240

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEAL 289
           + QGD +WY+IV W  YA   AEE+ I Q+N++   K +T+PD+Q  LG+  + + G+ L
Sbjct: 241 VRQGDDQWYDIVKWVVYATFNAEEMEIGQQNVDSKLK-STDPDIQALLGV--TGDYGQKL 297

Query: 290 GLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GL   W Y +I+ +GNYG++++R+ G  +   + R  N LW+KGGL+Y  PIR
Sbjct: 298 GLNNQWAYNLIKQVGNYGDIYNRHFGPDTPAPLERDLNNLWTKGGLLYGLPIR 350


>gi|293602040|ref|ZP_06684495.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Achromobacter piechaudii ATCC 43553]
 gi|292819570|gb|EFF78596.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Achromobacter piechaudii ATCC 43553]
          Length = 361

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 151/343 (44%), Positives = 227/343 (66%), Gaps = 6/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M       +     LF +S++  A      +K +GF++CG++TG+ GF+   + G W G 
Sbjct: 24  MK--ALKHVAAGTALFLSSWAATAGVTFDSVKNKGFVQCGVSTGVAGFSVNDSKGGWIGL 81

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CRAL+  +F DP+K + + ++A +RF ALQS ++D+L RNT  +L R+ +LGL   
Sbjct: 82  DVDLCRALAITMFGDPAKSKIMAVSAVQRFTALQSGEVDVLPRNTTLSLTRDTTLGLIGV 141

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            + Y+D QG +++K   + S  +L GA++CVQ GTTTEL LAD+F++ N+ + P+V ER+
Sbjct: 142 GVNYYDSQGIMVNKSLNVKSAKELDGATVCVQPGTTTELNLADWFRSQNIVFKPVVVERL 201

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +EI  A+   RCDA+TGD S L A +   + P ++ ILP+  SK PL P + QGD +W+N
Sbjct: 202 DEIIRAFAVGRCDAFTGDKSQLAAARSNLENPGQYDILPENFSKEPLGPMVRQGDEQWFN 261

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           +V WT +AM+ AEE G+T KN++++ K +TNP+VQR LG+  +  +G+ LG+   W Y I
Sbjct: 262 VVRWTMFAMLEAEEYGVTSKNVDEMLK-STNPNVQRLLGV--TPGMGKNLGVDDKWAYNI 318

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+H+GNYGE F++NLG  S LK+ RG NA +  GGLMY  P+R
Sbjct: 319 IKHIGNYGESFEKNLGPSSPLKLSRGLNASYRDGGLMYGWPVR 361


>gi|330938900|gb|EGH42413.1| extracellular solute-binding protein [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 324

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 148/324 (45%), Positives = 212/324 (65%), Gaps = 2/324 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     +  L        +   + L  IKK+GF++CG++ GL GF+   + G   G D
Sbjct: 3   MLKSTLAVVTALAAFGVIGAANAGTTLDAIKKKGFIQCGVSDGLPGFSVPDSTGKITGID 62

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            D CRA+++A+F D +K+++  LNAKERF ALQS +IDILSRNT WT  R+  +GL F  
Sbjct: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEIDILSRNTTWTSSRDAGMGLVFTG 122

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TY+DG GF+++ K G++S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +
Sbjct: 123 VTYYDGIGFLVNNKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSD 182

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   +    RCD  T D S LYA +    +P ++++LP++ISK PL P + +GD EW++I
Sbjct: 183 ESAKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSI 242

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I+
Sbjct: 243 VRWTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGQDLKLPKDWVVQIV 300

Query: 301 RHMGNYGEMFDRNLGNQSELKIPR 324
           + +GNYGE+F+RNLG  + LKI R
Sbjct: 301 KQVGNYGEVFERNLGEGTPLKIKR 324


>gi|296448618|ref|ZP_06890487.1| extracellular solute-binding protein family 3 [Methylosinus
           trichosporium OB3b]
 gi|296253868|gb|EFH01026.1| extracellular solute-binding protein family 3 [Methylosinus
           trichosporium OB3b]
          Length = 351

 Score =  325 bits (834), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 148/338 (43%), Positives = 210/338 (62%), Gaps = 3/338 (0%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
            F  +L L     +  +  A+ LG + +RG L CG+  G  GFA     G+W G DVDFC
Sbjct: 17  MFALLLPLAPARASGLAVRAATLGQVTERGRLLCGVGAGQPGFARQDEKGEWSGLDVDFC 76

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           RA+++AIFDDPS+   + L  KER  ALQ+ ++D+L+    WTL R+   G+AF    +F
Sbjct: 77  RAVAAAIFDDPSRASIVALTPKERLKALQTGEVDLLAHGAAWTLARDAGQGVAFVATLFF 136

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           DGQGF+  +K+   S   L+G SICVQ GT+ EL L D  +A +    P +F   EE   
Sbjct: 137 DGQGFLTARKRAAQSRRDLAGLSICVQQGTSFELDLVDGRRASDKPVEPRLFPSFEEAAE 196

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           AY   +CDA T D+S L A +   + P  H IL ++I K PL P + QGD +W+++V WT
Sbjct: 197 AYAQGQCDALTADLSTLAAERARLEAPDRHAILAELIDKEPLGPIVRQGDAQWFDVVRWT 256

Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304
           ++AM+ AEELG+   N+++  K + +P  +R LG++      E  GL  DW YRI++H+G
Sbjct: 257 YFAMLDAEELGVASTNVDEALK-SADPRTRRLLGVE--GGRVEGFGLEPDWAYRIVKHVG 313

Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           NYGE+F+RNLG+ S L + R  NALW++GGLMYAPP+R
Sbjct: 314 NYGEVFERNLGHGSPLGLDRRLNALWTEGGLMYAPPVR 351


>gi|99080135|ref|YP_612289.1| lysine-arginine-ornithine-binding periplasmic protein [Ruegeria sp.
           TM1040]
 gi|99036415|gb|ABF63027.1| Lysine-arginine-ornithine-binding periplasmic protein [Ruegeria sp.
           TM1040]
          Length = 338

 Score =  325 bits (833), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 155/342 (45%), Positives = 217/342 (63%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M    F     L +    + +  A  L D+K R  L CG++TGLVGF+   ANG+W+GFD
Sbjct: 1   MNNSVFFG--ALTVAGLAAGAAAAGTLDDVKARDKLNCGVSTGLVGFSAPNANGEWEGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +  CRA+++A+  DPSK++Y+P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  IAVCRAVAAAVLGDPSKVEYVPTTGKTRFTALASGEIDMLARNTTWTFSRDVDLKFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ G+SS  +L GA++C+Q GTTTEL LAD+F+A+N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMVPKELGVSSAKELDGATVCIQTGTTTELNLADFFRANNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + T D  + HVILP+IISK PL P +  GD EW ++
Sbjct: 179 EARQQYLAGACDVYTTDASGLAATRATFDDAANHVILPEIISKEPLGPLVRHGDNEWGDV 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT  AM+ AEELGIT  N+ + +  T NP++ R LG +    +GE LGL  D+  + +
Sbjct: 239 VRWTLNAMIAAEELGITSANLAEKAAGTDNPEINRLLGTE--GTLGEMLGLEADFAQKAL 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F + +G  + + + RG NA W+ GGL+YAPP R
Sbjct: 297 AAGGNYGEIFAKTIGEDTPVGLARGLNAQWTDGGLLYAPPFR 338


>gi|332098837|gb|EGJ03794.1| general L-amino acid-binding periplasmic protein aapJ [Shigella
           boydii 3594-74]
          Length = 357

 Score =  325 bits (833), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 157/359 (43%), Positives = 234/359 (65%), Gaps = 19/359 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL+GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLLGFSYADADGKFSGI 60

Query: 60  DVDF----------------CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103
           DVD                 CR++++A+F D +K++Y PL AKERF ALQS ++D+LSRN
Sbjct: 61  DVDVDVDVDVDVDVDVDVDVCRSVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRN 120

Query: 104 TDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADY 163
           T WT  R+  +G+AF  +TY+DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADY
Sbjct: 121 TTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADY 180

Query: 164 FKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISK 223
           FKA+NMKY P+ F+R +E   A  + RCD    D S LYAL++    P+E ++LP++ISK
Sbjct: 181 FKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISK 240

Query: 224 SPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSS 283
            PL P + +GD EW++IV WT +AM+ AEE+GI  +N+++ + +   PD+   LG +   
Sbjct: 241 EPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKE--G 298

Query: 284 NIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + G+ L L   W Y II+ +GNY E+F+RN+G++S LKI RG N LW+ GG+ YAPP+R
Sbjct: 299 DYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 357


>gi|115522563|ref|YP_779474.1| extracellular solute-binding protein [Rhodopseudomonas palustris
           BisA53]
 gi|115516510|gb|ABJ04494.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas
           palustris BisA53]
          Length = 347

 Score =  325 bits (833), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 162/350 (46%), Positives = 232/350 (66%), Gaps = 11/350 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFST--------NASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M K  F + L + ++  T+ +         +   L    +R  + CG+N GL GF+    
Sbjct: 1   MLKRTFQTGLGIGLVVATAIAAAAITYERYDTKTLKRTIRRDAVLCGVNKGLPGFSIPDD 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G W GFDVDFCRA+++AIFDDP K++++ L+A ERF  LQS+++DILSRN+ W++ RE 
Sbjct: 61  KGSWTGFDVDFCRAVAAAIFDDPKKVKFVALDANERFKELQSRKVDILSRNSTWSMARET 120

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              L F  + Y+DG GF++   + I S  +L G+ +CVQ  TTT+L +AD+F+A+N+KY 
Sbjct: 121 GFELYFPAVAYYDGAGFMLPASRKIDSALELDGSQVCVQDATTTQLNVADFFRANNLKYQ 180

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +   ++EE+  AY A +C+  + DIS LYAL++   +P +H ILPD+ISK PLAP + Q
Sbjct: 181 EVKAAKLEEVVKAYEAGQCNVLSADISQLYALRVNFAKPIDHTILPDVISKEPLAPVVRQ 240

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
            D +W  IV WT YAM+ AEELG++  NI++  K +  PDV R +G +     GE LGL+
Sbjct: 241 RDDDWMMIVKWTLYAMINAEELGVSSTNIDEALK-SKKPDVMRLVGTE--GAYGEELGLS 297

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           KDW  RIIRH+GNYGE+++RN+G+ S+L IPRG N LWS GG+ YAPPIR
Sbjct: 298 KDWAARIIRHVGNYGEVYERNVGSDSKLGIPRGLNQLWSAGGIQYAPPIR 347


>gi|316936277|ref|YP_004111259.1| family 3 extracellular solute-binding protein [Rhodopseudomonas
           palustris DX-1]
 gi|315603991|gb|ADU46526.1| extracellular solute-binding protein family 3 [Rhodopseudomonas
           palustris DX-1]
          Length = 344

 Score =  325 bits (833), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 170/350 (48%), Positives = 233/350 (66%), Gaps = 14/350 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFST--------NASILGDIKKRGFLKCGINTGLVGFAEVKA 52
           M+K  F + L L ++     +         +   L    +R  + CG+N GL GFA    
Sbjct: 1   MFKRTFQTGLALGLVVAAGIAAAAVTYERYDTKTLKRTIRRDAVLCGVNKGLPGFATPDD 60

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G+W GFDVDFCRA+++AIFDDP+K+++LPL+A ERF  LQS+++DILSRN+ W++ RE 
Sbjct: 61  KGNWTGFDVDFCRAVAAAIFDDPTKVKFLPLDANERFKELQSRKVDILSRNSTWSMSRET 120

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
           +  L F  + Y+DGQGF++   + I S  +L G+ +CVQ GTTT+L LADYF+ +NM Y 
Sbjct: 121 NYELYFPAVAYYDGQGFMVPASRKIDSAVELDGSKVCVQNGTTTQLNLADYFRTNNMTYQ 180

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            +  E+ +++  AY+  +CD +T D+S LYAL+ T     +HVILPD+ISK PLAP + Q
Sbjct: 181 EVKSEKFDDVVKAYKDGQCDTFTADVSQLYALRKTFANAGDHVILPDVISKEPLAPVVRQ 240

Query: 233 GDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
            D +W  IV WT YAM+ AEELGIT +NI++  K +  PDV R +G D     GE LGL+
Sbjct: 241 RDDDWMMIVKWTLYAMINAEELGITSQNIDEALK-SKKPDVMRLVGTD--GAFGEDLGLS 297

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           KDW  RI+RH+GNYGE++DRN+G    L IPRG N LWS GG+ YAPPIR
Sbjct: 298 KDWAARIVRHVGNYGEVYDRNVGK---LGIPRGLNQLWSNGGIQYAPPIR 344


>gi|83592118|ref|YP_425870.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC
           11170]
 gi|83575032|gb|ABC21583.1| extracellular solute-binding protein, family 3 [Rhodospirillum
           rubrum ATCC 11170]
          Length = 350

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 140/326 (42%), Positives = 203/326 (62%), Gaps = 3/326 (0%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
           F+S +     L  IK RG +K G+     GF+   + G W+GF +D  RAL+  +F+DP 
Sbjct: 28  FSSSAEAGETLDAIKARGVIKIGVGGNSPGFSAPDSAGRWQGFFIDIGRALAVTVFNDPE 87

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           K +++  + ++R  ALQS + DIL      T+ R   LG  F P+ ++DGQG ++ KK G
Sbjct: 88  KAEFVNSSPQQRLPALQSGEFDILLSGVTQTITRATKLGFHFGPVVFYDGQGLLVPKKLG 147

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I+  S+L GA++CVQ GTT EL +AD+F+ H + + P+V E   E   A+ + RCD  T 
Sbjct: 148 ITKGSELDGATVCVQTGTTGELNIADFFRQHKISFKPVVIEESNEFLKAFASGRCDVLTQ 207

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           D S L   +      +++V+LP+ ISK PLAPAI  GD  W  IV+WT YA++ AEELGI
Sbjct: 208 DSSDLAIRRTLLPNAADYVLLPERISKEPLAPAIRYGDDRWLEIVNWTVYALIEAEELGI 267

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
           TQ  I+     + NP ++RFLG+D S  + EA GL   + Y II+ +GNYGE+F+R++G 
Sbjct: 268 TQATIDSFL-GSDNPSIRRFLGVDPS--LAEATGLDAKFAYNIIKALGNYGEVFERSVGK 324

Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342
            S+L   RGYN  W++GGL+Y+PP R
Sbjct: 325 ASKLGFERGYNQPWTQGGLLYSPPFR 350


>gi|126731935|ref|ZP_01747738.1| ABC transporter amino acid-binding protein [Sagittula stellata
           E-37]
 gi|126707467|gb|EBA06530.1| ABC transporter amino acid-binding protein [Sagittula stellata
           E-37]
          Length = 337

 Score =  325 bits (832), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 146/316 (46%), Positives = 208/316 (65%), Gaps = 2/316 (0%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L D+K  G LKCG++ GL GF+     G+W G DVD+CRAL++A+  D   ++Y+ L+AK
Sbjct: 24  LDDVKAAGSLKCGVSQGLPGFSATNDAGEWTGIDVDYCRALAAAVLGDADAVEYVSLSAK 83

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
           +RF AL S +ID+LSRNT WT+ R+  LG+ F  + Y+DGQG ++    GI+S  +L GA
Sbjct: 84  DRFTALSSGEIDVLSRNTTWTITRDTDLGITFVGVNYYDGQGMMVPAGLGITSALELDGA 143

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
           +IC   GTTTEL + DYF  H+M +  +  E  +E+ AAY A RCD +T D S + A +L
Sbjct: 144 TICTNTGTTTELNITDYFTQHDMSFELVALENSDEVIAAYGAGRCDVFTTDRSGVAAERL 203

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
               P  HV+LP+ ISK PL P++  GD +W  +  W    ++ AEE GIT +N++++ +
Sbjct: 204 KLADPDAHVVLPETISKEPLGPSVRAGDEQWMKVAKWVLNGVIEAEEYGITSENVDEMLE 263

Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326
            + NP VQR LG    ++ G  LGL  D+ Y+ ++ +GNYGEM+DRN+G  + LK+ RG 
Sbjct: 264 -SENPSVQRILGA-GDNDYGAPLGLGADFVYQAVKQVGNYGEMYDRNVGPDTPLKLERGV 321

Query: 327 NALWSKGGLMYAPPIR 342
           N LW+KGG MYAPPIR
Sbjct: 322 NNLWNKGGFMYAPPIR 337


>gi|288962140|ref|YP_003452435.1| general L-amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
 gi|288914406|dbj|BAI75891.1| general L-amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
          Length = 353

 Score =  325 bits (832), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 152/338 (44%), Positives = 232/338 (68%), Gaps = 4/338 (1%)

Query: 6   FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCR 65
                  +    +  +   +    +K++G+++CG+N GL GF+     G W G DVD CR
Sbjct: 19  LSVSAFALSGALSGTAEAGATFDGVKQKGYVQCGVNLGLYGFSAPDDKGKWSGLDVDMCR 78

Query: 66  ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           A+++A+F D  K++Y PL+A++R  ALQS +IDIL+RNT  TL R+ + GL F P  Y+D
Sbjct: 79  AVAAAVFGDAEKVKYTPLSAQQRLPALQSGEIDILARNTTRTLTRDTANGLNFAPTNYYD 138

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           GQGF++  K G+ S  QL+GA++CV  GTTTE  ++DYF+A+ M + P+V E+ EE++ A
Sbjct: 139 GQGFMVSAKLGLKSAKQLNGATVCVLPGTTTEQNVSDYFRANKMTFKPVVIEKNEELNKA 198

Query: 186 YRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           + A RCDA T D S L A++      P+++VILP++ISK PL+PAI QGD EW N+V+W 
Sbjct: 199 FFAGRCDALTSDASQLAAIRAAEVPNPADYVILPELISKEPLSPAIRQGDEEWTNLVTWA 258

Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304
            YAMV AEE G+T + ++     + +PDV+R LG+  ++  G+ALG+ ++W + II+ +G
Sbjct: 259 FYAMVQAEEKGLTSETVDAAL-TSPDPDVKRLLGV--TAGNGKALGVEENWAFNIIKQVG 315

Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           NY + ++RN+G  S+LK+PRG NAL+++GGLMYAPP++
Sbjct: 316 NYAQSYERNVGAGSKLKMPRGQNALYTEGGLMYAPPMK 353


>gi|317405857|gb|EFV86140.1| extracellular solute-binding protein [Achromobacter xylosoxidans
           C54]
          Length = 340

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 145/343 (42%), Positives = 228/343 (66%), Gaps = 4/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    +   L +   +  +     L  +KK+G+++CG+  G+ GF+   + G+W+G D
Sbjct: 1   MKRLISFAAGALALACASQAAVAGPTLDAVKKKGYVQCGLTDGVSGFSATNSKGEWEGMD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A+F DP+K +   L+ ++RF ALQS ++D+L R    T  R+ SLGL+   
Sbjct: 61  VDICRAVAAAVFGDPTKFKGTALSTQQRFTALQSGEVDVLLRTVTLTQTRDTSLGLSAVA 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            +++DGQG +++KK G+ S  +L+GA++CVQ GTTTEL LAD+F+A+N+++ P+V ++V 
Sbjct: 121 ASFYDGQGILVNKKLGVKSAKELNGATVCVQPGTTTELNLADWFRANNIEFKPVVIDKVT 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E+  A+ + RCDA+T D S L A++     +P ++ ILP+  SK PL P + QGD  W  
Sbjct: 181 EVVRAFESGRCDAFTDDASQLAAVRATQVAKPDDYEILPERFSKEPLGPMVRQGDENWLG 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +A++ AEE GITQKN++++ K + NP++ R LG+  +   G+ +GL + W Y  
Sbjct: 241 IVRWTLFALLEAEEYGITQKNVDEMLK-SNNPNISRILGV--TPGAGKNMGLDEKWAYNA 297

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G  S+L + RG NALWSKGG MY  PIR
Sbjct: 298 IKAVGNYSEVFERNVGKDSKLGLQRGTNALWSKGGAMYPWPIR 340


>gi|33600508|ref|NP_888068.1| ABC transporter substrate-binding protein [Bordetella
           bronchiseptica RB50]
 gi|33568107|emb|CAE32020.1| Putative ABC transport system, substrate-binding protein
           [Bordetella bronchiseptica RB50]
          Length = 336

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 140/342 (40%), Positives = 198/342 (57%), Gaps = 6/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     ++  I    T+   +A  L D+K RG L C   TG  GF+     G   G +
Sbjct: 1   MKKTLTSLLVAAIA--HTAAPVHAGTLEDVKARGNLLCSSTTGSPGFSMPDDAGKRHGLE 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A+F DP + + + LN  +RF ALQS ++DIL   T WTL RE +  L    
Sbjct: 59  VDVCRAIATAVFGDPERHKIVVLNPTQRFTALQSGEVDILFNTTTWTLSREGAGALYAGV 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y      +      I+S  +L G +IC   G+TTEL L D+F+A+ +    I F  V+
Sbjct: 119 TYYDGQGVLVRK--GTIASAKELDGGAICTNQGSTTELNLVDFFRANKVSNEVITFATVQ 176

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY + RCDA++ D   L AL+     P +HVIL D +SK PL  A+ +GD  W+++
Sbjct: 177 EAANAYESGRCDAWSADAGILAALRSKMKAPDDHVILADRLSKEPLGAAVRKGDDAWFSV 236

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+ +A+  AEELG+T KNI + +K TTNP+V RF+G +   ++G+ LGL  DW Y+I+
Sbjct: 237 VRWSIFALQAAEELGLTSKNIAEQAKSTTNPEVLRFVGKE--GSLGKVLGLNGDWAYQIV 294

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +G+Y E+FDRN+G  S L + RG NA W  GGL Y PP R
Sbjct: 295 AQVGSYAEIFDRNIGAASPLNLERGINASWKNGGLFYTPPFR 336


>gi|311108222|ref|YP_003981075.1| general L-amino acid-binding periplasmic protein AapJ 1
           [Achromobacter xylosoxidans A8]
 gi|310762911|gb|ADP18360.1| general L-amino acid-binding periplasmic protein AapJ 1
           [Achromobacter xylosoxidans A8]
          Length = 340

 Score =  324 bits (830), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 146/343 (42%), Positives = 228/343 (66%), Gaps = 4/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    +   L +   +  +     L  +KK+GF++CG+  G+ GF+   + G+W+G D
Sbjct: 1   MKRSILFAASALALACASQAAVAGPTLDAVKKKGFVQCGLTDGVSGFSATNSKGEWEGMD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A+F DP+K +  PL+ ++RF ALQS ++D+L R    T  R+ SLGLA   
Sbjct: 61  VDICRAVAAAVFGDPTKFKGTPLSTQQRFTALQSGEVDVLLRTVTLTQTRDTSLGLAAVA 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            +++DGQG +++KK G+ S  +L+GA++CVQ GTTTEL LAD+F+ +N+++ P+V ++V 
Sbjct: 121 ASFYDGQGILVNKKLGVKSAKELNGATVCVQPGTTTELNLADWFRTNNIEFKPVVIDKVT 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E+  A+ + RCDA+T D S L A++     +P ++ ILP+  SK PL P + QGD  W  
Sbjct: 181 EVVRAFESGRCDAFTDDSSQLAAVRATQVAKPDDYEILPERFSKEPLGPMVRQGDENWLG 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +A++ AEE GITQKN++++ K + NP++ R LG+  +   G+ +GL + W Y  
Sbjct: 241 IVRWTLFALMEAEEYGITQKNVDEMLK-SNNPNIARILGV--TPGAGKNMGLDEKWAYNA 297

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G  S+L + RG NALW+KGG MY  PIR
Sbjct: 298 IKAVGNYSEVFERNVGKDSKLGLQRGTNALWNKGGAMYPWPIR 340


>gi|114766874|ref|ZP_01445796.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Pelagibaca
           bermudensis HTCC2601]
 gi|114540920|gb|EAU43980.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Roseovarius sp.
           HTCC2601]
          Length = 339

 Score =  323 bits (828), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 146/343 (42%), Positives = 214/343 (62%), Gaps = 5/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +    L +    + + +A+ L D+K RG L CG++TGL GF+   ANG W+GFD
Sbjct: 1   MKNTVILG--ALTVAGLAAGAASAATLDDVKARGNLNCGVSTGLTGFSAPDANGVWQGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  DP  ++++    + RF AL S +ID+L+RNT WT  R+  L   F  
Sbjct: 59  VAVCRAVAAAVLGDPMAVEFVSTTGQTRFTALASGEIDMLARNTTWTFSRDNDLKFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ K+ G+SS  +L GA++C+Q GTTTEL LAD+F+ +N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMIPKELGVSSAKELDGATVCIQTGTTTELNLADFFRVNNINYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    Y A  CD YT D S L A + + + P +HVILP+IISK PL P +  GD EW +I
Sbjct: 179 EAQQQYLAGACDVYTTDASGLAATRASFETPGDHVILPEIISKEPLGPLVRHGDNEWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTN-PDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
             WT  A++ AEE G+T  NI ++S   T+ P++ R LG +    +G  +GL  DW  + 
Sbjct: 239 ARWTLNALIAAEEYGVTSANIEELSSAPTDNPEINRLLGTE--GELGAMIGLEADWAKKA 296

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I   GNYGE+F++ +G  + + + RG NA W++GGLMY+PP R
Sbjct: 297 IMANGNYGEIFEKTIGENTPIGLSRGLNAQWTEGGLMYSPPFR 339


>gi|315499877|ref|YP_004088680.1| extracellular solute-binding protein family 3 [Asticcacaulis
           excentricus CB 48]
 gi|315417889|gb|ADU14529.1| extracellular solute-binding protein family 3 [Asticcacaulis
           excentricus CB 48]
          Length = 370

 Score =  323 bits (828), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 146/330 (44%), Positives = 220/330 (66%), Gaps = 4/330 (1%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
              T   ++++ L  +  RG + CG++ GL+GF+    +G W+GFDVDFCRAL++AIF D
Sbjct: 43  ATLTPTQSDSATLKAVLARGRVSCGVHPGLIGFSYKDNSGRWRGFDVDFCRALAAAIFSD 102

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
             K+ Y+PL   ERF AL++ ++D+L R+T WTL R+ +  + +  I Y+DGQGF++ K 
Sbjct: 103 ADKVTYVPLTTTERFEALKTGKVDVLWRSTSWTLSRDAADQVDYAGINYYDGQGFLVRKS 162

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             ++S ++L+GA ICVQ G+T+EL LAD+F+A  +KY+P+V +  +E   AY A +CDA 
Sbjct: 163 LRLNSATELNGARICVQTGSTSELNLADFFRARGLKYNPVVVKNEDEGRDAYAAGQCDAL 222

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
           + D+SAL A + T   P+ H ILP+IISK PL P + QGD +W +IV WT Y  + AEEL
Sbjct: 223 SSDVSALAAARATLSDPTAHTILPEIISKEPLGPVVRQGDDQWTDIVRWTLYVTIVAEEL 282

Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314
           G++ + +     ++ NP+V+R LG + +   G  L    +W Y I+  +GNYGE+FDRN+
Sbjct: 283 GVSSETVKAQQLESQNPEVRRLLGSEGNLGGGLGL--GPEWAYNILSQVGNYGEIFDRNI 340

Query: 315 GNQSELKIPRGYNALWS--KGGLMYAPPIR 342
           G  S LK+ RG NA W+  + GL+Y+PP+R
Sbjct: 341 GADSPLKLSRGLNAQWNAPERGLLYSPPVR 370


>gi|158422580|ref|YP_001523872.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS
           571]
 gi|158329469|dbj|BAF86954.1| extracellular solute-binding protein [Azorhizobium caulinodans ORS
           571]
          Length = 336

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 156/342 (45%), Positives = 226/342 (66%), Gaps = 6/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      +++    + FT+ +  A  L  +K RG L CG++TG+ GF+  + +G W GFD
Sbjct: 1   MK--TLFALVAGAAVAFTAPAAMAQTLKAVKDRGTLNCGVSTGIPGFS-QQVDGKWSGFD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VDFCRA+++A+ +DP+K+ ++PLNA++RF AL   ++D+LSRNT WTL RE      F  
Sbjct: 58  VDFCRAVAAAVLNDPAKVNFVPLNAEDRFTALSGSKVDLLSRNTTWTLEREAKQKFLFGA 117

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           +TYFDGQGF++   + I S  +L G+ +CVQ GTT      DYFK +NMK   +    V+
Sbjct: 118 VTYFDGQGFLVPAARKIESALELDGSKVCVQVGTTAASYAEDYFKTNNMKLELVTLPTVQ 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++  AY    C+  + D+SALYAL+    +P+ H++LPD+I+K PL P + QGD EW+N+
Sbjct: 178 DLVKAYENGTCNTISTDVSALYALRTGFAKPASHIVLPDVITKEPLGPVVRQGDDEWFNV 237

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WTHY M+  EELG++  ++++  K +  PDV+R +G D   + G  LGLTKD+  RII
Sbjct: 238 VKWTHYVMINGEELGVSSLSLDEALK-SQKPDVKRLVGTD--GDFGTELGLTKDFAVRII 294

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           R +GNYGE F+RN+G  S+L IPRG N LWS GG+ YAPP+R
Sbjct: 295 RAVGNYGEAFERNIGTGSKLAIPRGVNQLWSAGGIQYAPPVR 336


>gi|317403931|gb|EFV84400.1| L-amino acid ABC transporter [Achromobacter xylosoxidans C54]
          Length = 338

 Score =  323 bits (827), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 146/326 (44%), Positives = 218/326 (66%), Gaps = 3/326 (0%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
            T  +     L  +KKRG+++CG++TG+ GF+   + G+W+G DVD CRA+++ IF+D S
Sbjct: 16  VTGLAHAGPTLDTVKKRGYVQCGVSTGIQGFSSPDSKGNWQGLDVDMCRAIAATIFNDAS 75

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           K +  PL  + RF ALQS ++D+L+RN   T+ R+ +LGL    + Y+D QG ++  + G
Sbjct: 76  KFRLTPLTTQARFTALQSGEVDVLTRNVTPTMARDTTLGLISTGVNYYDSQGVMVSARLG 135

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           +  + +L GA+ICVQ GT TEL LAD+F+A+ +K+ P+V ++ +EI  A+ A RCDA+T 
Sbjct: 136 VRKLKELDGATICVQPGTVTELDLADWFRANGLKFKPVVIDKYDEIVRAFSAGRCDAFTS 195

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           D S L A + T + P  +VIL + I+KSPL P + QGD  W+N+V WT  AM+ AEE G+
Sbjct: 196 DKSQLAASRTTLEHPDNYVILDENIAKSPLGPMVRQGDDNWFNVVRWTLNAMLEAEEFGV 255

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
           T  N++   K +TNP+VQR LG+  +  +G+ LG+   W Y I++ +GNYGE ++RNLG 
Sbjct: 256 TSANVDSQLK-STNPNVQRILGV--TPGMGKNLGVDDKWAYNIVKQVGNYGESYERNLGM 312

Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342
            S +K+PRG NA W  GG MY  P+R
Sbjct: 313 ASAMKLPRGLNAQWRDGGQMYGWPVR 338


>gi|33596740|ref|NP_884383.1| ABC transporter substrate-binding protein [Bordetella parapertussis
           12822]
 gi|33573441|emb|CAE37426.1| Putative ABC transport system, substrate-binding protein
           [Bordetella parapertussis]
          Length = 336

 Score =  323 bits (827), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 140/342 (40%), Positives = 198/342 (57%), Gaps = 6/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K     ++  I    T+   +A  L D+K RG L C   TG  GF+     G   G +
Sbjct: 1   MKKTLTSPLVAAIA--HTAAPVHAGTLEDVKARGNLLCSSTTGSPGFSMPDDAGKRHGLE 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A+F DP + + + LN  +RF ALQS ++DIL   T WTL RE +  L    
Sbjct: 59  VDVCRAIATAVFGDPERHKIVVLNPIQRFTALQSGEVDILFNTTTWTLSREGAGALYAGV 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             Y      +      I+S  +L G +IC   G+TTEL L D+F+A+ +    I F  V+
Sbjct: 119 TYYDGQGVLVRK--GTIASAKELDGGAICTNQGSTTELNLVDFFRANKVSNEVITFATVQ 176

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E   AY + RCDA++ D   L AL+     P +HVIL D +SK PL  A+ +GD  W+++
Sbjct: 177 EAANAYESGRCDAWSADAGILAALRSKMKAPDDHVILADRLSKEPLGAAVRKGDDAWFSV 236

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+ +A+  AEELG+T KNI + +K TTNP+V RF+G +   ++G+ LGL  DW Y+I+
Sbjct: 237 VRWSIFALQAAEELGLTSKNIAEQAKSTTNPEVLRFVGKE--GSLGKVLGLNGDWAYQIV 294

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +G+Y E+FDRN+G  S L + RG NA W  GGL Y PP R
Sbjct: 295 AQVGSYAEIFDRNIGAASPLNLERGINASWKNGGLFYTPPFR 336


>gi|92119138|ref|YP_578867.1| extracellular solute-binding protein [Nitrobacter hamburgensis X14]
 gi|91802032|gb|ABE64407.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Nitrobacter hamburgensis X14]
          Length = 345

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 169/341 (49%), Positives = 233/341 (68%), Gaps = 6/341 (1%)

Query: 5   FFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
             + +     +   + +    +   L    +R  + CG+NTGL GF+ V   G+W GFDV
Sbjct: 8   LLIGLAIATAIAVMAVTYERYDTKTLKRTLRRDAVLCGVNTGLPGFSNVDEKGNWSGFDV 67

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           DFCRA+++AIFDDP+K++++PL A ERF  LQS+++DIL+RN+ W++ RE +  L F  +
Sbjct: 68  DFCRAVAAAIFDDPAKVKFVPLAADERFKELQSRKVDILARNSTWSMSRETNFDLYFPAV 127

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y+DG+GF++   +  +S   L G  ICVQ GTTT+L LADYFKA+N+ Y  I F ++E+
Sbjct: 128 AYYDGEGFMVRTSRKAASALDLGGTKICVQDGTTTKLNLADYFKANNLTYEEIKFGKLED 187

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           +  AY   +CD  T D++ LYA++L   +PSE  ILPD+ISK PLAP + Q D +W  IV
Sbjct: 188 MLKAYDEAKCDVVTSDVAQLYAMRLRLTKPSESFILPDVISKEPLAPVVRQRDDDWMMIV 247

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
            WT YAMV AEELG+T KNI++  K +  PDV R +G +     GEALGLTKDW  RIIR
Sbjct: 248 KWTLYAMVNAEELGVTSKNIDEAMK-SKKPDVMRLVGTE--GAYGEALGLTKDWAARIIR 304

Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           H+GNYGE++DRN+G  S+LKIPRG N LW+ GG+MYAPP+R
Sbjct: 305 HVGNYGEVYDRNVGADSKLKIPRGLNQLWNAGGIMYAPPLR 345


>gi|319940740|ref|ZP_08015081.1| extracellular solute-binding protein, family 3 [Sutterella
           wadsworthensis 3_1_45B]
 gi|319805800|gb|EFW02574.1| extracellular solute-binding protein, family 3 [Sutterella
           wadsworthensis 3_1_45B]
          Length = 340

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 144/342 (42%), Positives = 217/342 (63%), Gaps = 2/342 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      + +        S +   ++L  I+    L CG+NT   GF+   + G W+G D
Sbjct: 1   MKTTLLSAAVVAAAATAASPAFAGAVLDKIRANDQLVCGVNTSAPGFSSADSKGHWEGLD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V+ CR++++A+  +  K++Y+PL++ +   AL S QID+L+RNT WT+ R+ S G  F  
Sbjct: 61  VNLCRSVAAAVLGNADKVKYVPLSSTQHMTALASGQIDMLARNTTWTMTRDASHGNVFVA 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           ++Y+DGQ F++ K  G+ S+ +L GA++CVQ GTTTE T ADYF++H M+Y  +VF+  E
Sbjct: 121 VSYYDGQAFMVPKSLGVKSLKELDGATVCVQTGTTTEKTTADYFRSHGMQYKTVVFDTTE 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
               A+ + RCDAYT D+S L  ++     PS+  ILP+ I+K PL PA+ +GD E++ I
Sbjct: 181 ATQGAFLSGRCDAYTSDMSDLAGVRTVAQDPSKFDILPETITKEPLGPAVRRGDWEFFEI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+  A + AEELG+TQ N++ + K + +P+V R +G     ++G  LGL KDW+YRII
Sbjct: 241 VRWSFMAFLNAEELGVTQANVDDMRKTSKDPNVMRLVGT--GEDMGRMLGLDKDWSYRII 298

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE + +  G  S L +PRG N LW+ GGLMYA PIR
Sbjct: 299 KQVGNYGESWTKYFGPTSPLNLPRGMNKLWTDGGLMYAMPIR 340


>gi|311108521|ref|YP_003981374.1| general L-amino acid-binding periplasmic protein AapJ 2
           [Achromobacter xylosoxidans A8]
 gi|310763210|gb|ADP18659.1| general L-amino acid-binding periplasmic protein AapJ 2
           [Achromobacter xylosoxidans A8]
          Length = 338

 Score =  322 bits (825), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 145/342 (42%), Positives = 222/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M++  + +I  L +   +S +     L  ++KRG+L+CG++TG+ GF+   + G W G D
Sbjct: 1   MHRRTY-AICALALAAVSSQAFAGPTLDTVRKRGYLQCGVSTGIQGFSAPDSKGTWHGLD 59

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++ +F+D +K +  PL  + RF ALQS ++D+L+RN   T+ R+ +LGL    
Sbjct: 60  VDMCRAIAATVFNDATKYRLTPLTTQARFTALQSGEVDVLTRNVTPTMARDTTLGLLSVA 119

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+D QG ++  K G+  + +L GA++CVQ GT TEL LAD+F++ ++++ P+V E+ +
Sbjct: 120 VNYYDSQGVMVSDKLGVKKLRELDGATVCVQPGTVTELDLADWFRSQSLRFKPVVIEKYD 179

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           EI  A+ A RCDA+T D S L A ++T + P  +VIL + ISKSPL P + QGD  W NI
Sbjct: 180 EIVRAFSAGRCDAFTSDKSQLAASRMTLENPESYVILDENISKSPLGPMVRQGDDNWINI 239

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+  AM+ AEE GIT  N++   K  + P+VQR LG+  +  +G  +G+   W Y I+
Sbjct: 240 VRWSLNAMLEAEEFGITSSNVDAQLKANS-PNVQRILGV--TPGMGRNMGVDDKWAYNIV 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGE ++RNLG  S +K+PR  NA W  GGLMY  P+R
Sbjct: 297 KQVGNYGESYERNLGMSSPMKLPRALNAQWRDGGLMYGWPVR 338


>gi|75677073|ref|YP_319494.1| extracellular solute-binding protein [Nitrobacter winogradskyi
           Nb-255]
 gi|74421943|gb|ABA06142.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Nitrobacter winogradskyi Nb-255]
          Length = 345

 Score =  322 bits (825), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 168/320 (52%), Positives = 226/320 (70%), Gaps = 3/320 (0%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           +   L    +R  + CG+NTGL GF+     G+W GFDVDFCRA+++AIFDDPSK++++P
Sbjct: 29  DTKTLKRTLRRDAVLCGVNTGLPGFSSSDEKGNWSGFDVDFCRAVAAAIFDDPSKVKFVP 88

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           L A ERF  LQS+++DIL+RN+ W++ RE +  L F  + Y+DG+GF++   +   S   
Sbjct: 89  LAADERFKELQSRKVDILARNSTWSMSRETNFNLYFPAVAYYDGEGFMVRTSRKADSALD 148

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L    ICVQ+ TTT+L LADYF+A+N+KY  I FE++E++  AY   RCD  T D+S LY
Sbjct: 149 LGDTKICVQSATTTQLNLADYFRANNLKYEEIRFEKLEDVLRAYDEARCDVVTADVSQLY 208

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           AL+L   +P+E  ILPD+ISK PLAP + Q D +W  I+ WT YAM+ AEELG+T KNI+
Sbjct: 209 ALRLRLTKPNESFILPDVISKEPLAPVVRQRDDDWMMIIKWTLYAMINAEELGVTSKNID 268

Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322
           +  K T  PDV R +G +     GEALGLTKDW  RIIRH+GNYGE++DRN+G +S LKI
Sbjct: 269 EAMKSTK-PDVMRLVGTE--GQYGEALGLTKDWAARIIRHVGNYGEVYDRNIGTESRLKI 325

Query: 323 PRGYNALWSKGGLMYAPPIR 342
           PRG N  W+ GG+MYAPP+R
Sbjct: 326 PRGLNQPWNAGGIMYAPPLR 345


>gi|293607066|ref|ZP_06689409.1| general amino acid ABC superfamily ATP binding cassette
           transporter, binding protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292814556|gb|EFF73694.1| general amino acid ABC superfamily ATP binding cassette
           transporter, binding protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 340

 Score =  322 bits (824), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 146/343 (42%), Positives = 226/343 (65%), Gaps = 4/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    +   L +   +  +     L  +KK+GF++CG+  G+ GF+   + G+W+G D
Sbjct: 1   MKRSTLFAAGALALACASQAAIAGPTLDAVKKKGFVQCGLTDGVSGFSATNSKGEWEGMD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A+F DPSK +   L+ ++RF ALQS ++D+L R    T  R+ SLGL+   
Sbjct: 61  VDICRAVAAAVFGDPSKFKGTALSTQQRFTALQSGEVDVLLRTVTLTQTRDTSLGLSAVA 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            +++DGQG +++KK G+ S  +L+GA++CVQ GTTTEL LAD+F+A+ +++ P+V ++V 
Sbjct: 121 ASFYDGQGILVNKKLGVKSAKELNGATVCVQPGTTTELNLADWFRANKIEFKPVVIDKVT 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E+  A+ + RCDA+T D S L A++     +P ++ ILP+  SK PL P + QGD  W  
Sbjct: 181 EVVRAFESGRCDAFTDDSSQLAAVRATQVAKPDDYEILPERFSKEPLGPMVRQGDENWLG 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +A++ AEE GITQKN++++ K + NP+V R LG+  +   G+ +GL + W Y  
Sbjct: 241 IVRWTLFALLEAEEYGITQKNVDEMLK-SNNPNVLRILGV--TPGAGKNMGLDEKWAYNA 297

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY E+F+RN+G  S+L + RG NALWS GG MY  PIR
Sbjct: 298 IKAVGNYSEVFERNVGKDSKLGLARGTNALWSNGGAMYPWPIR 340


>gi|227327916|ref|ZP_03831940.1| general L-amino ABC transporter binding protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 305

 Score =  321 bits (823), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 152/305 (49%), Positives = 216/305 (70%), Gaps = 2/305 (0%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           CGI+ GL GF+   A+G + G DVD CR L++A+F D +K++Y PL AKERF ALQS ++
Sbjct: 3   CGISDGLPGFSYADASGKYSGIDVDVCRGLAAAVFGDANKVKYTPLTAKERFTALQSGEV 62

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+LSRNT WT  R+  +G+ F  +TY+DG GF+ H K G++S  +L GA++C+QAGT TE
Sbjct: 63  DVLSRNTTWTSSRDGGMGMLFTGVTYYDGIGFLTHNKAGLTSAKELDGATVCIQAGTDTE 122

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           L +ADYFK H M+Y P+ F+R +E   A  + RCD    D S LYAL++   +P+E ++L
Sbjct: 123 LNVADYFKTHKMQYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSKPAEFIVL 182

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           P++ISK PL P + +GD EW+ IV WT +AM+ AEE+G+T KN++Q++   T PD+   L
Sbjct: 183 PEVISKEPLGPVVRRGDEEWFAIVRWTLFAMLNAEEMGVTSKNVDQLAAKPTTPDMSHLL 242

Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337
           G +   + G+ L L  DW ++II+ +GNYGE+F+RN+G  SELKI RG N LW+KGG+ Y
Sbjct: 243 GHE--GSYGKDLKLPNDWAFKIIKQVGNYGEIFERNVGMGSELKIKRGLNELWNKGGIQY 300

Query: 338 APPIR 342
           AP +R
Sbjct: 301 APAVR 305


>gi|297567745|ref|YP_003686716.1| hypothetical protein Mesil_3397 [Meiothermus silvanus DSM 9946]
 gi|296852194|gb|ADH65208.1| hypothetical protein Mesil_3397 [Meiothermus silvanus DSM 9946]
          Length = 345

 Score =  321 bits (823), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 140/349 (40%), Positives = 215/349 (61%), Gaps = 11/349 (3%)

Query: 1   MYKDF---FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDW 56
           M K +    + +  +  +         S L  +K RG L CG+N  L GF  +    G  
Sbjct: 1   MIKAWRKPLLLVAVVAYVLTGMGLAQQSRLDVVKGRGKLVCGVNARLPGFGFLDEKTGKA 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            GFDVDFCRA+++A+FDDP K++Y+PL+A+ RF A+Q+ ++D+  RNT  T  R+ ++G+
Sbjct: 61  TGFDVDFCRAVAAALFDDPEKVEYVPLDARVRFQAVQNGEVDVAFRNTTVTSSRDGAVGV 120

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH-PIV 175
            F P+T++DGQG ++ K    SS+ +L GA+ C   GTT E  ++DY ++   +    + 
Sbjct: 121 DFLPVTFYDGQGVMVKKG-KASSLRELEGATFCTTQGTTNEKNISDYIRSRRWRNTRLLT 179

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           FE  +++ AA    RCDA+T D S L   + T   P + +IL + ISK PLA  + + D+
Sbjct: 180 FEDGQKVFAALLEGRCDAFTADKSQLVGYRGTASNPDDLLILRETISKEPLAGMVRENDS 239

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295
            W + ++W  YA + AEE GIT KN++Q +K +  P+V+RFLG++    +G+ LGL  D+
Sbjct: 240 RWRDALTWIVYATIQAEEFGITVKNLDQQTK-SDVPEVRRFLGLE--GTLGKDLGLPPDF 296

Query: 296 TYRIIRHMGNYGEMFDRNLGNQSELKIPRG--YNALWSKGGLMYAPPIR 342
             RI+RH+GNYGE++DR  G +S   IPR    NAL++KGGL+Y+PP R
Sbjct: 297 AVRIVRHVGNYGEIYDRYFGPKSAFAIPRAGTLNALYNKGGLLYSPPFR 345


>gi|220914746|ref|YP_002490054.1| extracellular solute-binding protein family 3 [Methylobacterium
           nodulans ORS 2060]
 gi|219952497|gb|ACL62887.1| extracellular solute-binding protein family 3 [Methylobacterium
           nodulans ORS 2060]
          Length = 341

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 137/347 (39%), Positives = 224/347 (64%), Gaps = 11/347 (3%)

Query: 1   MYKDFFVSILCLIILFFT----SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M +    +IL   +  F     +  + +  + DI+ RG L CG+  G  GF+   + G  
Sbjct: 1   MNRVLAGAILFGALAAFADPSWAQGSGSKTIDDIRARGQLVCGVTAGAAGFSLPDSRGVM 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +G D D CRA+++A   +  K++Y+P     RF ALQS +IDIL R+T WTL RE +LGL
Sbjct: 61  RGIDADICRAVAAATLGEADKVRYVPTTVTNRFTALQSGEIDILVRSTTWTLSREANLGL 120

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F  + +FDG GF+++K  G+ S  +L+GA+IC+Q GT+TEL +ADYF+ H MK+ PI+ 
Sbjct: 121 EFAGVYFFDGTGFMVNKSLGVKSSKELNGATICIQPGTSTELAVADYFREHGMKFKPILI 180

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDT 235
           +   E    + + RCDAY+ DISAL + +     +  ++V+LP++ISK P+   + +GD 
Sbjct: 181 QDPAETQNTFISGRCDAYSMDISALASFRFQQGPKKDDYVLLPEVISKEPVGVMVRKGDE 240

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295
           +++++V W+  A++  EE G+TQ N++Q+  D+ +P ++R LG++   ++G+A+G+   W
Sbjct: 241 KFFDLVRWSMIALLQGEESGVTQANVDQML-DSKDPTIRRMLGLE--GDLGKAMGVDNKW 297

Query: 296 TYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            Y+I++ +GN+GE+++RN+   + L I RG NALW+KGGL Y PP+R
Sbjct: 298 AYKILKSVGNFGEIWERNI---APLGISRGINALWTKGGLHYPPPMR 341


>gi|317405707|gb|EFV86003.1| L-amino acid ABC transporter [Achromobacter xylosoxidans C54]
          Length = 338

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 144/340 (42%), Positives = 222/340 (65%), Gaps = 3/340 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K          +L  +  ++       +K +GF++CG++TG+ GF+   + G W G DVD
Sbjct: 2   KALTTVAAGAALLLSSWGASAGVTFESVKNKGFVQCGVSTGVAGFSVNDSKGGWMGLDVD 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
            CRAL+  +F D SK + + ++A +RF ALQS ++D+L RNT  +L R+ +LGL    + 
Sbjct: 62  LCRALAVTMFGDASKAKIMAVSAVQRFTALQSGEVDVLPRNTTLSLTRDTTLGLIGVGVN 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+D QG +++K   + S  +L GA++CVQ GTTTEL L+D+F++ N+ + P+V ER++EI
Sbjct: 122 YYDSQGIMVNKSLNVKSAKELDGATVCVQPGTTTELNLSDWFRSQNIAFKPVVVERLDEI 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A+   RCDA+TGD S L A +   + P ++ ILP+  SK PL P + QGD +W+N+V 
Sbjct: 182 IRAFAVGRCDAFTGDKSQLAAARTNLENPEKYDILPENFSKEPLGPMVRQGDEQWFNVVR 241

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           WT +AM+ AEE G+T KN++++ K +TNP+VQR LG+  +  +G+ LG+   W Y +I+ 
Sbjct: 242 WTMFAMLEAEEYGVTSKNVDEMLK-STNPNVQRLLGV--TPGMGKNLGVDDKWAYNVIKQ 298

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGE F++NLG  S +K+ RG NA +  GGLMY  P+R
Sbjct: 299 IGNYGESFEKNLGATSPMKLSRGLNASYRNGGLMYGWPVR 338


>gi|253690349|ref|YP_003019539.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251756927|gb|ACT15003.1| extracellular solute-binding protein family 3 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 350

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 134/326 (41%), Positives = 204/326 (62%), Gaps = 4/326 (1%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            + + N   L  IK RG L CG++    GF+ + + G W G DVD+CRAL++A+F D +K
Sbjct: 28  AADAGNGETLKKIKARGELVCGVHPARHGFSAIDSKGQWTGLDVDYCRALAAAVFGDANK 87

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           +++  L+  +RF A+QS ++D+LSRN    L R+ SLGL F P T++ G GF++     +
Sbjct: 88  VRFAALSTAQRFPAIQSGEVDVLSRNITADLSRDTSLGLNFAPPTFYTGTGFMVRTSANV 147

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
             V  L GA++C+  G++TE  +A  F + N+ Y P+V E  +E  AAY + RCD    D
Sbjct: 148 KKVEDLDGATVCITPGSSTERNVAQIFASRNLHYTPVVIENNKEYVAAYLSGRCDVIARD 207

Query: 198 ISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
             AL  ++    ++PS+HVILP I SK PLA A+ QGD +WY+IV W  YA   AEE+ I
Sbjct: 208 KVALPGVRTFDAEKPSDHVILPGIYSKEPLAMAVRQGDDQWYDIVKWVVYATFNAEEMEI 267

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
            Q+N++   K +T+PD+Q  LG+  + + G+ LGL+  W Y +I+ +GNY ++++R+ G 
Sbjct: 268 GQQNVDSKLK-STDPDIQALLGV--TGDYGQKLGLSNQWAYNVIKQVGNYSDIYNRHFGP 324

Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342
            +   + R  N LW+KGGL+Y  PIR
Sbjct: 325 DTPAPLERDLNNLWTKGGLLYGLPIR 350


>gi|85714820|ref|ZP_01045806.1| extracellular solute-binding protein, family 3 [Nitrobacter sp.
           Nb-311A]
 gi|85698306|gb|EAQ36177.1| extracellular solute-binding protein, family 3 [Nitrobacter sp.
           Nb-311A]
          Length = 345

 Score =  320 bits (821), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 162/341 (47%), Positives = 228/341 (66%), Gaps = 6/341 (1%)

Query: 5   FFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDV 61
             + +     +   + +    +   L    +R  + CG+N G+ GF+     G+W GFDV
Sbjct: 8   LLIGLAIATAIAVMAITYERYDTKTLKRTLRRDAVLCGVNAGVPGFSNSDEKGNWSGFDV 67

Query: 62  DFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPI 121
           DFCRA+++AIFDDP+K++++PL + ERF  LQS+++DIL+RN+ W++ RE +  L F  +
Sbjct: 68  DFCRAVAAAIFDDPAKVKFVPLESDERFKELQSRKVDILARNSTWSMSRETNYNLYFPAV 127

Query: 122 TYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEE 181
            Y+DG+GF++   +   S   L    ICVQ  TTT+L LADYFKA+N+KY  I F ++E+
Sbjct: 128 AYYDGEGFMVRTSRKADSALDLGDTKICVQDSTTTKLNLADYFKANNLKYEEIKFGKLED 187

Query: 182 IDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIV 241
           +  AY   +CD  T D+S LYAL+L   +P+E  ILPD+ISK PLAP + Q D +W  I+
Sbjct: 188 MLRAYDEAKCDVLTADVSHLYALRLRLTKPNESFILPDVISKEPLAPVVRQRDDDWMMII 247

Query: 242 SWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIR 301
            WT YAM+ AEELG+T KNI++  K +  PDV R +G D     GE LGLTKDW  RI+R
Sbjct: 248 KWTLYAMINAEELGVTSKNIDEAMK-SKKPDVMRLVGTD--GQYGEGLGLTKDWAARIVR 304

Query: 302 HMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           H+GNYGE++DRN+G+ S LKIPRG N LW+ GG+MYAPP+R
Sbjct: 305 HVGNYGEVYDRNIGSDSRLKIPRGLNQLWNAGGIMYAPPLR 345


>gi|296387623|ref|ZP_06877098.1| putative amino acid-binding protein [Pseudomonas aeruginosa PAb1]
          Length = 305

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 150/305 (49%), Positives = 217/305 (71%), Gaps = 2/305 (0%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQI 97
           CG++ GL GF+   A G +KG DVD CRAL++A+F D  K+++ PL+A ERF ALQS  +
Sbjct: 3   CGVSDGLPGFSYADAKGRFKGLDVDICRALAAALFGDAEKVRFTPLSATERFSALQSGTV 62

Query: 98  DILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTE 157
           D+LSRNT WT  R+ +LG+ F  +TYFDGQGF++++K G+SS  +L   ++C+Q+GTT E
Sbjct: 63  DLLSRNTSWTSSRDTALGIHFTGVTYFDGQGFLVNRKLGVSSARELKDTTVCIQSGTTNE 122

Query: 158 LTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVIL 217
           L +ADYF+AH ++Y  ++ +  E+   A  A +CD  + D S LYA +L   +P ++V+L
Sbjct: 123 LNVADYFRAHGIRYKAVLDDSYEKSARALEAGQCDVLSSDQSQLYAQRLKLAKPEQYVVL 182

Query: 218 PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFL 277
           P++ISK PL PA+ QGD  W+NIV WT Y ++ AEELG+T  N+ + ++D+ NPDV R L
Sbjct: 183 PEVISKEPLGPAVRQGDEAWFNIVRWTLYGLLNAEELGVTSSNVERQARDSRNPDVARLL 242

Query: 278 GIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMY 337
           G +   + G+ L L +DW  +++R +GNYGE+F RN+G+ S LK+PRG NA W+ GGL Y
Sbjct: 243 GSE--GDAGKDLQLPRDWVVQMVRQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGLHY 300

Query: 338 APPIR 342
           APPIR
Sbjct: 301 APPIR 305


>gi|317970283|ref|ZP_07971673.1| extracellular solute-binding protein [Synechococcus sp. CB0205]
          Length = 354

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 135/351 (38%), Positives = 206/351 (58%), Gaps = 13/351 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNAS-----ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           +    ++  L  L  T  +   S      L  +K RG L CG++  L GF+ V  +G ++
Sbjct: 6   RKVLRALPLLAGLVLTGCAVEGSGPQSQKLAAVKARGQLVCGVDGKLPGFSFVAPDGRYQ 65

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL- 116
           GF+VD CRA+++ +  DP+K+++  L+A ERF A+ S ++D+LSR+T  TL R+ + G  
Sbjct: 66  GFEVDLCRAVAAGVLSDPAKVEFRDLSASERFAAVNSGEVDLLSRSTTMTLSRDAAGGNA 125

Query: 117 -AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
            +F PI ++ GQ  +++   GI+ + QL+G  ICV  GTTTEL LAD  +  N  Y P+ 
Sbjct: 126 LSFAPIHFYGGQAVMVNAGSGITYLKQLAGKPICVTTGTTTELNLADRMRELNAAYMPLK 185

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           F+   +   AY   RC A T D + L A + +   P  HV+L   +SK PLA   + GD 
Sbjct: 186 FQNDGQTYGAYLQGRCVAVTSDRALLAAKRSSFPDPKAHVLLAGDLSKEPLAMGTVNGDP 245

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGEALGL 291
            W + V W  YA++ AEE GITQ N+     +   D+   D++RFLG+D    +G+ LGL
Sbjct: 246 AWADAVRWIAYALMQAEESGITQANVEAKLAEAQADSNQADLRRFLGVD--GQLGQQLGL 303

Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             D+  ++I+ +GNYGE+F+RNLG  + + + RG N  W+ GGL+Y+PP R
Sbjct: 304 PADFVVQVIKAVGNYGEIFERNLGVNTRINLERGTNRQWTDGGLIYSPPFR 354


>gi|39935694|ref|NP_947970.1| polar amino acid ABC transport substrate-binding protein AapJ-2
           [Rhodopseudomonas palustris CGA009]
 gi|39649547|emb|CAE28069.1| polar amino acid ABC transport substrate-binding protein, aapJ-2
           [Rhodopseudomonas palustris CGA009]
          Length = 340

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 141/319 (44%), Positives = 197/319 (61%), Gaps = 7/319 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
              L  IK RG +K G+     G+    +NG W+GF VDF RAL+  +F DP K+Q+   
Sbjct: 29  GPTLDRIKSRGVIKVGV-GTTPGYFAPDSNGRWQGFFVDFGRALAVTVFGDPDKVQFTSS 87

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           + ++R  ALQS + D+L      T+ R   LG  F P  ++DGQG ++ K  G++S SQL
Sbjct: 88  SPQQRLPALQSGEFDVLLSGVTVTITRAFKLGFHFGPTIFYDGQGILVRKDLGVTSASQL 147

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            GA+I +Q+GTT EL +ADYF+ H  K+ P+  E   E  AA  + R D  T D S L A
Sbjct: 148 DGATIGIQSGTTGELNIADYFRKHRHKFTPVTIEDTSEFIAALDSGRVDGLTQDASDLAA 207

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
            +    +PS++VILP+ +SK PLAPA+  GD  W  IV+WT  A + AEE GIT KN++ 
Sbjct: 208 KQTQLKKPSDYVILPERLSKEPLAPAVAGGDDRWLEIVTWTVNATIQAEEWGITSKNVDD 267

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323
             K + +P ++RFLG+D S  + E++GL   W Y II+ +GNYGE+FDR+L     L   
Sbjct: 268 FLK-SDDPSIRRFLGVDPS--LAESIGLDPKWAYTIIKTVGNYGEIFDRHL---KPLGWE 321

Query: 324 RGYNALWSKGGLMYAPPIR 342
           RGYN LW++GGL+Y+PP R
Sbjct: 322 RGYNRLWTQGGLLYSPPFR 340


>gi|299134008|ref|ZP_07027201.1| extracellular solute-binding protein family 3 [Afipia sp. 1NLS2]
 gi|298590755|gb|EFI50957.1| extracellular solute-binding protein family 3 [Afipia sp. 1NLS2]
          Length = 350

 Score =  319 bits (818), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 161/333 (48%), Positives = 224/333 (67%), Gaps = 3/333 (0%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           +  +  F      +   L    KRG + CG+N GL GFA   ANG+W GFDVD CRA+++
Sbjct: 21  IVAVGAFTALDRYDTQTLKRTVKRGAVNCGVNAGLPGFANKDANGNWSGFDVDICRAVAA 80

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
           A+FDD +K+ ++PL+  +RF  LQ++++DILSRN+ W++ RE+   L F  ++Y+DG+GF
Sbjct: 81  AVFDDATKVNFIPLDTNQRFKELQNRKVDILSRNSTWSMSREVDYDLTFAAVSYYDGEGF 140

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++ + + + S  +L G  +CVQ+ TTT+L LADYFK +N+ Y  + F  V ++  AY A 
Sbjct: 141 MVRRSRNVDSALELGGTRVCVQSDTTTQLNLADYFKVNNITYDEMKFGNVSDMLKAYEAG 200

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           +CD  T D S LYA +    +P +HVIL DIISK PLAP + Q D +W  IV W  YAM+
Sbjct: 201 KCDVLTTDTSQLYAYRQNLAKPDDHVILADIISKEPLAPVVRQRDDQWMLIVKWAVYAML 260

Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309
            AEELG+T KNI++  K +  PDV R +G +   N GE LGLTKDW  RIIRH+GNYGE+
Sbjct: 261 NAEELGVTSKNIDEALK-SKKPDVMRLVGTE--GNYGEELGLTKDWAARIIRHVGNYGEV 317

Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++RN+G  S+L IPRG N LW+ GG+ YAPPIR
Sbjct: 318 YERNVGLGSKLGIPRGLNQLWNAGGIQYAPPIR 350


>gi|192291277|ref|YP_001991882.1| extracellular solute-binding protein family 3 [Rhodopseudomonas
           palustris TIE-1]
 gi|192285026|gb|ACF01407.1| extracellular solute-binding protein family 3 [Rhodopseudomonas
           palustris TIE-1]
          Length = 340

 Score =  319 bits (818), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 140/319 (43%), Positives = 196/319 (61%), Gaps = 7/319 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
              L  IK RG +K G+     G+    +NG W+GF VDF RAL+  +F DP K+Q+   
Sbjct: 29  GPTLDRIKSRGVIKVGV-GTTPGYFAPDSNGRWQGFFVDFGRALAVTVFGDPDKVQFTSS 87

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           + ++R  ALQS + D+L      T+ R   LG  F P  ++DGQG ++ K  G++S SQL
Sbjct: 88  SPQQRLPALQSGEFDVLLSGVTVTITRAFKLGFHFGPTIFYDGQGILVRKDLGVTSASQL 147

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            GA+I +Q+GTT EL +ADYF+ H  K+ P+  E   E  AA  + R D  T D S L A
Sbjct: 148 DGATIGIQSGTTGELNIADYFRKHRHKFTPVTIEDTSEFIAALDSGRVDGLTQDASDLAA 207

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
            +    +P ++VILP+ +SK PLAPA+  GD  W  IV+WT  A + AEE GIT KN++ 
Sbjct: 208 KQTQLKKPGDYVILPERLSKEPLAPAVAGGDDRWLEIVTWTVNATIQAEEWGITSKNVDD 267

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323
             K + +P ++RFLG+D S  + E++GL   W Y II+ +GNYGE+FDR+L     L   
Sbjct: 268 FLK-SDDPSIRRFLGVDPS--LAESIGLDPKWAYTIIKTVGNYGEIFDRHL---KPLGWE 321

Query: 324 RGYNALWSKGGLMYAPPIR 342
           RGYN LW++GGL+Y+PP R
Sbjct: 322 RGYNRLWTQGGLLYSPPFR 340


>gi|254424681|ref|ZP_05038399.1| hypothetical protein S7335_4841 [Synechococcus sp. PCC 7335]
 gi|196192170|gb|EDX87134.1| hypothetical protein S7335_4841 [Synechococcus sp. PCC 7335]
          Length = 350

 Score =  319 bits (817), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 140/324 (43%), Positives = 209/324 (64%), Gaps = 3/324 (0%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           +  ++ S L  +  RG L CG++ G+ GF+ V+A G + G DVD C+A+++A+FDDP ++
Sbjct: 30  AVGSSGSRLQTVLDRGELICGVDGGIPGFSFVEA-GAYSGLDVDVCKAVAAALFDDPEQV 88

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
            Y  L++ ERF AL+  ++D+LSRNT WTL R+ S+G+ F P T++DGQG ++ +  GI+
Sbjct: 89  VYRNLDSTERFEALKGGEVDMLSRNTTWTLSRDTSVGMEFGPTTFYDGQGMLVREADGIA 148

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
            +S   G S+CV+AGTTTEL LAD  +   + + P  F+  +   AAY A  C+  T D 
Sbjct: 149 ELSDFEGRSVCVEAGTTTELNLADQMRQLGVSFEPQTFQDADAAYAAYEAGSCEGMTSDK 208

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           S L A + T   P EHV+L   +SK PL P  I  D+ W++ V W  YA++  EELG+T 
Sbjct: 209 SQLIARRSTLTNPDEHVLLDVTMSKEPLGPLTINNDSAWFDTVKWVTYALIEGEELGLTS 268

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
           +NI +    T +P ++RF G +    +G  +GL  D+  R I+H+GNYGE+++RNLG  S
Sbjct: 269 ENIEETVASTEDPTIRRFAGEE--GTLGSDMGLPNDFALRAIKHVGNYGEIYERNLGEGS 326

Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342
           +  + RG NALWS+GGL+Y+PP R
Sbjct: 327 QFALARGQNALWSEGGLLYSPPFR 350


>gi|296534477|ref|ZP_06896902.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Roseomonas cervicalis ATCC 49957]
 gi|296265196|gb|EFH11396.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Roseomonas cervicalis ATCC 49957]
          Length = 449

 Score =  319 bits (817), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 130/327 (39%), Positives = 206/327 (62%), Gaps = 2/327 (0%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
                S+ +  L  ++ RG L CG++TG+ GFA   + G W+G DVD CR L++AIF+DP
Sbjct: 125 AAAQTSSASPTLEAVRARGQLVCGVHTGIAGFALPDSRGVWQGLDVDLCRGLAAAIFNDP 184

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           +K++ +P+++  RF AL S ++D+L R +  T+LR+ +LGL      +FDG GF++    
Sbjct: 185 AKLRLVPVSSSTRFTALGSGELDVLFRTSTQTMLRDTTLGLRHAVTYFFDGHGFMVRADS 244

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           G+  V++L GA+IC+  GTT E   ADYF++ N  + P+VFER +++ AA +A RCDA+ 
Sbjct: 245 GVQRVAELRGATICLVQGTTNEQVTADYFRSINTPFQPVVFERTDQVAAALQAGRCDAFG 304

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D S L A + +   P++  +LP+  SK P    + +GD  W++IV W   A++ AEE G
Sbjct: 305 TDASQLAATRASLPNPAQWSVLPERFSKEPYGAYVRRGDDNWFDIVRWYTTAIIEAEEQG 364

Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
           +T  N   +   + NP+ +R LG+  +  +G+AL L   W Y  IR +GNY E++DR++G
Sbjct: 365 VTAANAEAMRGSSANPNTRRLLGV--TPELGQALKLDPLWAYNAIRAVGNYAEIYDRHMG 422

Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342
             + + +PRG N  W++GGL+YA P+R
Sbjct: 423 PATPIGLPRGPNEQWTRGGLLYAWPMR 449


>gi|116749482|ref|YP_846169.1| extracellular solute-binding protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116698546|gb|ABK17734.1| extracellular solute-binding protein, family 3 [Syntrophobacter
           fumaroxidans MPOB]
          Length = 347

 Score =  318 bits (815), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 125/339 (36%), Positives = 199/339 (58%), Gaps = 3/339 (0%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
               ++  ++LF  + ++    L  IK RG L+CG++ G+ GF+    +G W G DVDFC
Sbjct: 11  LVTLLIASVLLFPENVASAGDTLIRIKARGKLRCGVSDGIPGFSWKGPDGRWTGMDVDFC 70

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           RAL++A+  DP K+ ++PL A  RF AL++ ++D+L+RNT WT+ RE  LG+ F  +  +
Sbjct: 71  RALAAAVLKDPEKVDFVPLTASRRFPALKAGELDVLARNTTWTMEREAVLGILFAGVLVY 130

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           D QGF++    GI+ +SQL GA++CV  G++ E  +A  F A N  Y P+  E   +  A
Sbjct: 131 DTQGFLVPTSSGITELSQLDGATVCVVRGSSHEEHIAQTFGARNWTYQPLQVESSVQAMA 190

Query: 185 AYRAHRCDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           A    +C A+T +   L   ++     P ++ +L + IS+ P+ P + +GD +W+ IV W
Sbjct: 191 ALNEGKCKAFTSESPQLKTARMNAPDGPDQYSLLKETISEEPMGPVVRRGDEDWFTIVRW 250

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303
             + ++ AE+ G T  N+    + T +     +  +D    I ++LG+   W  R++  +
Sbjct: 251 VLFTLILAEDGGYTGANVRSRLEKTADFRAMSWKQLD--GLIAKSLGIDPGWRIRVVESV 308

Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GNYGE+F+RNLG+QS L + RG N LW   GLMYAPP R
Sbjct: 309 GNYGEVFERNLGSQSTLNLERGPNKLWKDAGLMYAPPFR 347


>gi|261823404|ref|YP_003261510.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
 gi|261607417|gb|ACX89903.1| extracellular solute-binding protein family 3 [Pectobacterium
           wasabiae WPP163]
          Length = 350

 Score =  318 bits (815), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 137/326 (42%), Positives = 204/326 (62%), Gaps = 4/326 (1%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            + + N   L  IK RG L CG++    GF+ + + G W G DVD+CRAL++AIF D SK
Sbjct: 28  AADAGNGETLKKIKARGELVCGVHPARHGFSAIDSKGQWTGLDVDYCRALAAAIFGDASK 87

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           +++  L+  +RF A+QS ++D+LSRN    L R+ SLGL F P T++ G GF++     +
Sbjct: 88  VRFAALSTAQRFPAIQSGEVDVLSRNITADLSRDTSLGLNFAPPTFYTGTGFMVRTSANV 147

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            +V  L GA++C+  G++TE  +A  F + N+ Y P+V E  +E  AAY + RCD    D
Sbjct: 148 KTVEDLDGATVCITPGSSTERNVAQIFASRNLHYTPVVIENNKEYVAAYLSGRCDVIARD 207

Query: 198 ISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
             AL  ++    ++P++HVILP I SK PLA A+ QGD +WY+IV W  YA   AEE+ I
Sbjct: 208 KVALPGVRTFDAEKPADHVILPGIYSKEPLAMAVRQGDDQWYDIVKWVVYATFNAEEMEI 267

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
            Q+N++   K +T+PDVQ  LG   + + G+ LGL   W Y +I+ +GNYG++++R+ G 
Sbjct: 268 GQQNVDSKLK-STDPDVQALLGT--TGDYGQKLGLNNQWAYNLIKQVGNYGDIYNRHFGP 324

Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342
            +   + R  N LW+KGGL+Y  PIR
Sbjct: 325 DTPAPLERDLNNLWTKGGLLYGLPIR 350


>gi|126731767|ref|ZP_01747571.1| Lysine-arginine-ornithine-binding periplasmic protein [Sagittula
           stellata E-37]
 gi|126707594|gb|EBA06656.1| Lysine-arginine-ornithine-binding periplasmic protein [Sagittula
           stellata E-37]
          Length = 344

 Score =  318 bits (814), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 140/347 (40%), Positives = 210/347 (60%), Gaps = 8/347 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M K F      ++I      +     +   L  IK RG L CG++    GFA   + G+W
Sbjct: 1   MTKIFKSLSTGMLIGAAALATAAQAESGDTLASIKSRGELLCGVHPARHGFAAPDSQGNW 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
            G +VD+C AL++A+F D  K++++ L++++RF A+QS ++D+L RN   TL R+ +LGL
Sbjct: 61  AGLEVDYCHALAAAVFGDADKVRFVALSSQQRFPAIQSGEVDVLVRNVTATLGRDTALGL 120

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F P  ++ G GF++H   G+ +V  L GA+ICV  G+TTE  +A  F +  M+Y P+V 
Sbjct: 121 NFAPPIFYTGTGFLVHAGSGVETVEDLDGATICVAPGSTTERNVAQIFASRGMEYTPVVI 180

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           E  +++  AY   RCDA T D +AL  ++      P EHV+LP I SK PLAPA+ QGD 
Sbjct: 181 ENNKQLVDAYVTGRCDALTKDKAALPGVRAYDTTDPKEHVLLPGIFSKEPLAPAVRQGDD 240

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDW 295
           +WY+IV W  YA   AEELG+T +N  ++  ++ + DV   LG   + + G  LGLT+DW
Sbjct: 241 QWYDIVKWVVYATFNAEELGVTSENAEEMR-NSDDVDVMSLLGT--TGDYGSKLGLTEDW 297

Query: 296 TYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            Y +I  +GNYGE++DR+ G  S +++ R  N  W+ GGL+Y  PI+
Sbjct: 298 AYDVITQVGNYGEIYDRHFGPDSPVQLDRDLNKQWTDGGLLYGFPIK 344


>gi|160899043|ref|YP_001564625.1| extracellular solute-binding protein [Delftia acidovorans SPH-1]
 gi|160364627|gb|ABX36240.1| extracellular solute-binding protein family 3 [Delftia acidovorans
           SPH-1]
          Length = 345

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 153/319 (47%), Positives = 220/319 (68%), Gaps = 3/319 (0%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
              L  IK+RG + CG++TG  GFA    +G+W G DVD CRA+++A   D SK++++P 
Sbjct: 28  GKTLDGIKQRGAVACGVHTGRAGFALADGSGNWSGLDVDLCRAVAAATLGDASKVKFIPT 87

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           + + R  ALQS +ID+L+RNT WT  R+  LGL +  I + DGQGF+  KK G++SV QL
Sbjct: 88  SGQTRITALQSGEIDLLARNTTWTFTRDNGLGLMWAGINFHDGQGFMARKKPGLNSVKQL 147

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           SGA+ICV +G+TTE TL++YF+AH + Y  +VF+  E    A+ + RC AYTGD+ AL  
Sbjct: 148 SGATICVISGSTTEKTLSEYFRAHKLNYKAVVFDNPEAALQAFSSGRCQAYTGDLGALAV 207

Query: 204 LKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           L+      P ++VILP++ISK P  PA+ +GD EW+ +V WT  AM+ AEELGITQ N +
Sbjct: 208 LRGKELANPDDYVILPEVISKEPAGPAVRRGDDEWFAVVRWTLNAMIEAEELGITQANAD 267

Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322
           ++   + +  V+RFLG     ++G+ LGL K+W  RI++ +GNYGE ++RNLG +S L +
Sbjct: 268 ELKTRSDSIQVKRFLGQSD--DLGKQLGLDKEWALRIVKAVGNYGESYERNLGAKSGLNV 325

Query: 323 PRGYNALWSKGGLMYAPPI 341
           PRG NAL++KGGLM +PP+
Sbjct: 326 PRGKNALFTKGGLMMSPPM 344


>gi|254466846|ref|ZP_05080257.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Rhodobacterales bacterium Y4I]
 gi|206687754|gb|EDZ48236.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Rhodobacterales bacterium Y4I]
          Length = 337

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 139/336 (41%), Positives = 211/336 (62%), Gaps = 4/336 (1%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
              +    +   + S +A  L D++  G L CG++ G+ GF+   + G W G D D CRA
Sbjct: 6   TLAILATAVATMAASAHAGKLEDVRAAGELACGVSEGVPGFSNPNSEGVWTGLDADICRA 65

Query: 67  LSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           +++A   D + ++++PL +K++ LA+ S Q+D+ SR T WT+ R+ + G+ F  + Y+DG
Sbjct: 66  VAAATLGDANAVRFVPLASKQKVLAVSSGQVDMTSRTTTWTMKRDSAEGVDFTSVVYYDG 125

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
           QGF++    G++S  +L  A++C+  GTTTEL +AD+ +A+ +   P+VFE   E   AY
Sbjct: 126 QGFMVRADAGVTSAKELDAATVCLTTGTTTELNMADFARANGLTLEPVVFEGKREAVEAY 185

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
            + RCDA T D S L A +     PS+H ILP+IISK PLAP +  GD +W ++V+W  Y
Sbjct: 186 ASGRCDALTTDASQLAAFRAGFANPSDHKILPEIISKEPLAPFVAHGDNQWKDVVTWVVY 245

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306
            ++TAEELG+TQ N+  ++  + NPDVQR LG   S + G  LGL+  W    I  +GNY
Sbjct: 246 GLITAEELGVTQANVADMAASSANPDVQRLLGA--SGDTGGLLGLSNTWMADAISAIGNY 303

Query: 307 GEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GE+++RNL   + L + RG NALWS GG++YA P+R
Sbjct: 304 GEIYERNL--TATLGLERGVNALWSDGGILYAMPVR 337


>gi|269102822|ref|ZP_06155519.1| amino acid ABC transporter amino acid-binding protein
           [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268162720|gb|EEZ41216.1| amino acid ABC transporter amino acid-binding protein
           [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 342

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 146/333 (43%), Positives = 220/333 (66%), Gaps = 3/333 (0%)

Query: 10  LCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSS 69
           L L+ L F+  S  +S L  +KKRG++KCG++TGL+GF+E    G W GFDV+FCRA+++
Sbjct: 13  LVLVALLFSYASVASSTLETVKKRGYIKCGVSTGLLGFSEPNQKGIWHGFDVEFCRAVAA 72

Query: 70  AIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF 129
           A+  D  +++++PL AKERF ALQ+  +D+L+RNT WTL R+ SL + F  ++Y+DGQGF
Sbjct: 73  AVLKDKGQVKFIPLTAKERFFALQNNDVDLLARNTSWTLHRDTSLNVLFTGVSYYDGQGF 132

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++     I+ +++LS   IC Q GTTTEL L++YF      +  I F+   ++  A+   
Sbjct: 133 LVKTSANINKITELSNPRICFQTGTTTELNLSEYFAQIKQPFQSIPFDAKPQLVTAFEDD 192

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           RCD  + D + LY++K +   P    IL  +ISK PL P +   D++W+NIV WT + ++
Sbjct: 193 RCDVISSDKAGLYSIKQSLKDPLSAHILVSVISKEPLGPVVRDNDSQWFNIVKWTLFTLL 252

Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309
            AEE  I+ +NI+ + KD++ P + RFL      N+ E L L  DW Y+II+ +GNYG++
Sbjct: 253 NAEENRISSENIDDL-KDSSIPHIARFLSTKD--NLSEGLQLPLDWRYQIIKQVGNYGQI 309

Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++R LG+ S+LK+ RG NALW  GG+ YAPPIR
Sbjct: 310 YERTLGHSSKLKMERGLNALWIDGGIQYAPPIR 342


>gi|296537351|ref|ZP_06899216.1| ABC superfamily ATP binding cassette transporter, amino acid
           binding protein [Roseomonas cervicalis ATCC 49957]
 gi|296262324|gb|EFH09084.1| ABC superfamily ATP binding cassette transporter, amino acid
           binding protein [Roseomonas cervicalis ATCC 49957]
          Length = 344

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 152/318 (47%), Positives = 219/318 (68%), Gaps = 6/318 (1%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             +G I+ RG L CG+     GF+   + G  +G D D CRA+++AIF D SK++++   
Sbjct: 33  DTVGAIRARGALICGVTGTTAGFSLPDSQGVMRGIDADTCRAVAAAIFGDASKVRFVNTT 92

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           ++ RF ALQS ++D+L+RNT WTL RE SLG  F  I ++DGQGF++     ++S   L 
Sbjct: 93  SQNRFTALQSGEVDMLARNTTWTLSREASLGFEFASINFYDGQGFMVKTSLNVTSAKALD 152

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
           GA+ICVQ GTTTEL LADYF+ + M++ P+V E VEEI  A+ + RCDAYT D S+L A 
Sbjct: 153 GATICVQPGTTTELNLADYFRTNRMRFTPVVIESVEEIRTAFNSGRCDAYTNDASSLAAF 212

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           + T   P+E+++LP+IISK PL   + +GD ++++IV W H+A VTAEELGIT +N+   
Sbjct: 213 RATQANPAEYLLLPEIISKEPLGAVVRKGDWKFFDIVRWAHFAQVTAEELGITSQNLASF 272

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
             D+ NPDVQRF+G  KS ++G  LG+  DW  +I+R +GN+GE+++RN+   + L + R
Sbjct: 273 -ADSPNPDVQRFMG--KSGDLGRMLGVQADWAVQIVRQVGNFGEVWERNI---TPLGVQR 326

Query: 325 GYNALWSKGGLMYAPPIR 342
           G N LW++GGL YAPP+R
Sbjct: 327 GINRLWTQGGLQYAPPMR 344


>gi|296535903|ref|ZP_06898057.1| amino-acid ABC superfamily ATP binding cassette transporter,
           substrate-binding protein [Roseomonas cervicalis ATCC
           49957]
 gi|296263760|gb|EFH10231.1| amino-acid ABC superfamily ATP binding cassette transporter,
           substrate-binding protein [Roseomonas cervicalis ATCC
           49957]
          Length = 325

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 144/317 (45%), Positives = 212/317 (66%), Gaps = 4/317 (1%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L  ++ +  L C  N G  GF    + G+ +G D D CRA+++A+    ++I++  L +
Sbjct: 13  TLAAVRAKALLDCSANQGSPGFGVPDSRGEQQGLDPDICRAVAAAVLGPNARIRWTVLTS 72

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
             R  ALQS Q+DI++R   WT  RE++ GL F    ++DGQGFI+ K  G++  +QL G
Sbjct: 73  ATRVTALQSGQVDIVARTFTWTHAREVNAGLQFASPVFYDGQGFIVPKASGVTRAAQLDG 132

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           ASICV AG+T EL LAD+ +++ ++ +P+VFE  E+   AY + RCDAYT D S L    
Sbjct: 133 ASICVTAGSTNELNLADWARSNGLRVNPVVFEGNEDTRKAYTSGRCDAYTLDASQLAGFA 192

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
            T  R  EHVIL DIISK PL+PA+ +GD +WY+IV WT +A++ AEE GITQ N++ + 
Sbjct: 193 TTLPRG-EHVILSDIISKEPLSPAVRKGDAQWYDIVRWTIFALILAEEHGITQANVDSML 251

Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325
           + + NP+V+R LG+  + + G A+GL + W Y  I+ +GNYGE+F+R+LG +S L + RG
Sbjct: 252 E-SQNPEVRRLLGV--AGDHGPAMGLDRRWAYNAIKAVGNYGEIFERHLGAESPLGLERG 308

Query: 326 YNALWSKGGLMYAPPIR 342
            NALW++GGL+YAPP+R
Sbjct: 309 LNALWNRGGLLYAPPMR 325


>gi|317405314|gb|EFV85638.1| amino acid-binding periplasmic protein [Achromobacter xylosoxidans
           C54]
          Length = 341

 Score =  315 bits (807), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 140/321 (43%), Positives = 202/321 (62%), Gaps = 4/321 (1%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
               +  IKKRG L CG++ G  G +     G W G D D CRAL++A+  DP K +++P
Sbjct: 24  AGVTVDAIKKRGELVCGVSQGSAGLSIADKQGRWTGLDADLCRALAAAVLGDPEKTRFVP 83

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           L++++RF ALQ  +ID+L+RNT  T  R+  LG+    I ++DGQGF++ KK G+ S ++
Sbjct: 84  LSSQQRFPALQGGEIDVLNRNTTITSSRDAGLGIVSAGIVFYDGQGFLVPKKLGVKSATE 143

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS-AL 201
           L GA +CVQ GT  E  L DYFK H + Y P+V E + E++ A+ A RCD Y  D S   
Sbjct: 144 LDGAQVCVQPGTVNEQNLVDYFKKHKLNYRPVVIENLVELEQAFYAGRCDVYLSDASTLA 203

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
            +       P + VILP+ I+KSPL P + Q D  W  IV WT  A+V AEELGIT +N+
Sbjct: 204 ASRAARAANPDDFVILPERINKSPLGPFVRQDDPNWTAIVRWTVNALVAAEELGITSRNV 263

Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
           +  ++ +++  V+R LG+D    IG+  GL + W   +IR +GNYGE++DRNLG  + LK
Sbjct: 264 DSQAQ-SSDAQVRRLLGLDP--GIGKGFGLDEGWARNVIRAVGNYGEVWDRNLGAATPLK 320

Query: 322 IPRGYNALWSKGGLMYAPPIR 342
           + RG N  W++GGL+Y+PP +
Sbjct: 321 LDRGLNRQWNQGGLLYSPPFQ 341


>gi|33592620|ref|NP_880264.1| putative extracellular solute-binding protein [Bordetella pertussis
           Tohama I]
 gi|33595874|ref|NP_883517.1| putative extracellular solute-binding protein [Bordetella
           parapertussis 12822]
 gi|33600404|ref|NP_887964.1| putative extracellular solute-binding protein [Bordetella
           bronchiseptica RB50]
 gi|33565953|emb|CAE36503.1| putative extracellular solute-binding protein [Bordetella
           parapertussis]
 gi|33568003|emb|CAE31916.1| putative extracellular solute-binding protein [Bordetella
           bronchiseptica RB50]
 gi|33572266|emb|CAE41818.1| putative extracellular solute-binding protein [Bordetella pertussis
           Tohama I]
          Length = 340

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 143/343 (41%), Positives = 219/343 (63%), Gaps = 4/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   ++   L +      +     L  +KK+GF++CG+  G+ GF+   + G+W+G D
Sbjct: 1   MKRHIAMAAGALALALGAQAAHAGPTLDAVKKKGFVQCGLTDGVAGFSATNSKGEWEGMD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A+F D  K +   L+ ++RF ALQS ++D+L R    T  R+ SLGLA   
Sbjct: 61  VDICRAVAAAVFGDAGKFKGTALSTQQRFTALQSGEVDVLLRTVTLTQTRDTSLGLAAVA 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            +++DGQG ++ K  G+ S  +L  A+ICVQ GTTTEL LAD+F+A+ +K+ P+V ++V 
Sbjct: 121 ASFYDGQGVLVRKALGVKSAKELDEATICVQPGTTTELNLADWFRANGIKFTPVVIDKVT 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           E+  A+ + RCDA+T D S L A++     +P +  ILP+  SK PL P + QGD  W  
Sbjct: 181 EVVRAFESGRCDAFTDDASQLAAVRATQVAKPDDFEILPERFSKEPLGPMVRQGDENWLG 240

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           IV WT +A++ AEE GITQ+N++++ K + NP+V R LG+  +   G+ +GL + W Y  
Sbjct: 241 IVRWTLFALMEAEEYGITQQNVDEMLK-SKNPNVLRILGV--TPGAGKNMGLDEKWAYNA 297

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+ +GNY ++F+RN+G  S L + RG NALWS+GG MY  PIR
Sbjct: 298 IKAVGNYSQIFERNVGKDSRLGLQRGVNALWSQGGAMYPWPIR 340


>gi|83595863|gb|ABC25225.1| glutamate/glutamine/aspartate/asparagine-binding protein bztA
           precursor [uncultured marine bacterium Ant4D3]
          Length = 340

 Score =  314 bits (805), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 144/316 (45%), Positives = 204/316 (64%), Gaps = 3/316 (0%)

Query: 28  GDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKE 87
            D++  G LKC + TGL GFA   ANG W+GFD DFCRA+++A+  D  K++++P   K 
Sbjct: 27  EDVRAAGELKCVVTTGLAGFAAPDANGRWEGFDADFCRAVAAAVLGDGDKVKFVPSTGKT 86

Query: 88  RFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS 147
           RF  L S + DIL RNT  TL R++ L L+F P+ ++DGQGF++    G++S   L GAS
Sbjct: 87  RFTMLNSGEGDILFRNTTETLSRDVDLKLSFLPVNFYDGQGFMVPAALGVTSAMDLDGAS 146

Query: 148 ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT 207
           +C+Q GTTTEL LADYF+A+ M Y P+  E  EE    Y A RCD YT D S L + +  
Sbjct: 147 VCIQTGTTTELNLADYFRANGMSYEPVPIETNEEGFTNYVAGRCDVYTTDASGLASTRAK 206

Query: 208 NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKD 267
            D P++HV+LP+IISK PL  A+  GD +W++I  W   A++ AEE+G+TQ N   ++ +
Sbjct: 207 FDDPTQHVVLPEIISKEPLGGAVRHGDDQWHDIGKWVVNALINAEEMGVTQANAMNLAAN 266

Query: 268 -TTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326
              NP + R +G +   ++G  LGL   W  R +   GNYGE+++RN+G  + L+I RG 
Sbjct: 267 VGKNPGINRLVGSE--GSMGAMLGLDAKWAARAVAQGGNYGEIYERNVGPNTPLEIARGL 324

Query: 327 NALWSKGGLMYAPPIR 342
           N LW+ GG++YA PIR
Sbjct: 325 NNLWNNGGVLYAAPIR 340


>gi|148655565|ref|YP_001275770.1| extracellular solute-binding protein [Roseiflexus sp. RS-1]
 gi|148567675|gb|ABQ89820.1| extracellular solute-binding protein, family 3 [Roseiflexus sp.
           RS-1]
          Length = 415

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 132/323 (40%), Positives = 200/323 (61%), Gaps = 10/323 (3%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN- 84
           L  +K+RG+L CG N  L GF    +    W GFDVDFCRA+++AIF D +K++++ L  
Sbjct: 96  LARVKERGYLICGTNADLPGFGFYDSVRQTWSGFDVDFCRAVAAAIFGDATKVEFVALGT 155

Query: 85  ---AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                 RF A++  ++D+L RNT WTL R    GLAF P T+ DGQ F++  K  I+ + 
Sbjct: 156 GPGPNNRFDAVREGRVDVLFRNTTWTLGRN-ISGLAFGPTTFHDGQTFMVRAKDRITKLE 214

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L G  ICV  GTT+E  L D F A  +++   V +  +E+  AY    CDA T D S L
Sbjct: 215 DLEGKVICVAKGTTSEQNLNDDFAARGIRFTARVLDGEDELYPAYDEGECDAVTSDSSQL 274

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
            A +     P++H+IL D IS+ PL P I + D +W +++SWT +A + AEEL + Q+N+
Sbjct: 275 AAKRQQLKNPADHIILGDRISREPLGPVIARDDNQWLDVISWTVFATIYAEELRVDQRNV 334

Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
           +++   TT+P ++R LG++   N GE LGL  D+ Y+II+ +GNYG++++RNLG  + + 
Sbjct: 335 DRLRTSTTDPRIKRLLGLE--GNFGEGLGLPNDFAYQIIKQVGNYGDIYNRNLGPNTVIN 392

Query: 322 IPRGYNALWS--KGGLMYAPPIR 342
           + RG N +W+   GG++ +PP R
Sbjct: 393 LDRGPNKVWNLGAGGVLASPPFR 415


>gi|113953701|ref|YP_730400.1| polar amino acid ABC transporter periplasmic amino acid-binding
           protein [Synechococcus sp. CC9311]
 gi|113881052|gb|ABI46010.1| polar amino amino acid ABC transporter (PAAT) family, periplasmic
           amino acid-binding protein [Synechococcus sp. CC9311]
          Length = 381

 Score =  313 bits (801), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 135/352 (38%), Positives = 211/352 (59%), Gaps = 12/352 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M        L   +      +T     AS L  IK+R  L+CG++  + GF+ ++ +G +
Sbjct: 32  MRVHLLALPLVSFLFILNGCATLGEGGASRLDLIKRRAELRCGVSGKIPGFSFLRRDGSF 91

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--L 114
            G DVD CRA ++A+   P ++QY  L A ERF AL++ +ID+LSRNT + L R+     
Sbjct: 92  AGLDVDICRAFAAALTGSPDQVQYRSLTAPERFTALRTGEIDLLSRNTTFNLSRDAVGGN 151

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           G++F P+ + DGQG ++ ++ G+S ++ L G +ICV +GTTTE  L D F+A  + Y PI
Sbjct: 152 GVSFAPVVFHDGQGLLVKRQSGVSDLNDLQGKTICVGSGTTTEQNLNDAFQARGIDYKPI 211

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            ++ + ++ A Y   RC A T D S L A +   + P +HVILP+++SK PLAP    GD
Sbjct: 212 KYQDLNQVIAGYLQGRCSAMTSDRSQLAAARSGFNNPEQHVILPEVLSKEPLAPLAAGGD 271

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNI----NQVSKDTTNPDVQRFLGIDKSSNIGEALG 290
               + + W  YA++ AEELGITQ+NI     +  +      ++RFLG++    +GE LG
Sbjct: 272 QRLADAMRWVIYALIAAEELGITQQNIGDKLEEAQRRPELTQLRRFLGVE--GELGEKLG 329

Query: 291 LTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           L  D+  ++I+ +GNYGE+++R+LG  S + IPRG N L+  GG++ +PP +
Sbjct: 330 LNNDFIVKVIQAVGNYGEIYNRHLGPDSAVPIPRGLNNLYRNGGVLTSPPFQ 381


>gi|295689853|ref|YP_003593546.1| extracellular solute-binding protein family 3 [Caulobacter segnis
           ATCC 21756]
 gi|295431756|gb|ADG10928.1| extracellular solute-binding protein family 3 [Caulobacter segnis
           ATCC 21756]
          Length = 376

 Score =  312 bits (799), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 143/319 (44%), Positives = 207/319 (64%), Gaps = 6/319 (1%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L  ++ RG+L CG+  GL+GFA     G W+GFD DFCRA ++AIF      ++ P ++
Sbjct: 62  TLAAVRARGYLVCGVQQGLIGFAYADNTGRWRGFDTDFCRATAAAIFGRAEAARFTPTSS 121

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
            ER   LQ+ ++D+L RNT  T  R+      F  + Y+DGQ F++ K  G++  +QL+G
Sbjct: 122 TERLTVLQAGEVDVLWRNTSATFSRDA--KFDFSGVNYYDGQAFLVRKALGVAHAAQLNG 179

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           A IC+Q G+T+E+ L DYF+AH + Y P+VF+  ++  AAY   +CD YT D+S L A +
Sbjct: 180 ARICIQTGSTSEMNLTDYFRAHKLTYEPVVFDTEDKARAAYGREQCDVYTADLSNLAAAR 239

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
            T  RP +H+ILP++ISK PL P + QGD  W N+V WT  AM+ AEELG+T  N+  + 
Sbjct: 240 ATLARPGDHLILPEVISKEPLGPVVRQGDDAWGNVVRWTLNAMILAEELGVTSANVEALR 299

Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325
             + NP+++R LG +     G  +GL+ D+ ++IIR +GNYGE+F RNLG  + LKI RG
Sbjct: 300 ARSDNPEIRRLLGAEP--GYGAMIGLSDDFAFQIIRQVGNYGEVFARNLGPATPLKIERG 357

Query: 326 YNALWSKG--GLMYAPPIR 342
            NALW+    GL+YAPP+R
Sbjct: 358 LNALWNASPPGLLYAPPMR 376


>gi|87302592|ref|ZP_01085409.1| polar amino acid transport system substrate-binding proetin
           [Synechococcus sp. WH 5701]
 gi|87282936|gb|EAQ74893.1| polar amino acid transport system substrate-binding proetin
           [Synechococcus sp. WH 5701]
          Length = 405

 Score =  312 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 135/333 (40%), Positives = 206/333 (61%), Gaps = 8/333 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             +     +  L  I+ R  L CG++  L GF+ +  +G + G D D CRA+++A+  DP
Sbjct: 75  SGSGGGVQSVKLSTIRGRDKLVCGVDGKLPGFSFLGPDGTYSGLDADTCRAVAAAVLGDP 134

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLAFRPITYFDGQGFIMHK 133
           SK++Y  LN+ ERF AL S ++D+L+RNT  TL R+ +   G++F P T++DGQG ++  
Sbjct: 135 SKVEYRDLNSSERFAALASGEVDMLARNTTMTLSRDSAGGNGISFGPTTFYDGQGVMVPV 194

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
             G  ++  L G  ICV++GTTTEL LAD  +   + Y P+ F+  ++  AAY   RC A
Sbjct: 195 ASGARTLKDLDGKPICVESGTTTELNLADRMREQGIAYTPLKFQTGDQTYAAYLGGRCVA 254

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            T D S L A + +  +P EH++LP+++SK PL PA + GD  W + + WT +A+  AEE
Sbjct: 255 VTSDRSQLAAKRSSFPKPDEHILLPEVMSKEPLTPASVNGDPAWADALRWTVFALFQAEE 314

Query: 254 LGITQKNINQVSK----DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309
           LGIT+ N+         +T   D++RFLG++   + G+ LGL  D+  + I  +GNYGE+
Sbjct: 315 LGITKANVAAKVAEAKANTNQADLRRFLGVE--GDFGKQLGLPADFVAKTIAAVGNYGEI 372

Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           F+RN+G  S LK+ R  N LW++GGL+Y+PP R
Sbjct: 373 FERNVGTGSPLKLERAENRLWTQGGLIYSPPFR 405


>gi|326204744|ref|ZP_08194599.1| extracellular solute-binding protein family 3 [Clostridium
           papyrosolvens DSM 2782]
 gi|325985115|gb|EGD45956.1| extracellular solute-binding protein family 3 [Clostridium
           papyrosolvens DSM 2782]
          Length = 363

 Score =  312 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 137/365 (37%), Positives = 208/365 (56%), Gaps = 27/365 (7%)

Query: 1   MYKDF-------FVSILCLIILFFTSFSTN-----------------ASILGDIKKRGFL 36
           M K F          +L   +L  T  S++                  SIL  +K RG +
Sbjct: 1   MRKIFNAKALGKVAMLLVASVLVVTGCSSSNEQSDTSGKSGTKGQGSESILQKVKARGKV 60

Query: 37  KCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
             G +T L GF  ++ +G + GFD++  +A ++AI  DP+  +  P+  + RF ALQ+ +
Sbjct: 61  YIGCDTVLPGFGFLETDGKYSGFDIEIGKAFAAAILGDPNAAEMKPVTGQTRFTALQTGE 120

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT 156
           IDILSR T  ++ R+ +LG+ F P  ++DGQG ++ K K + +   L G  I V+ GTTT
Sbjct: 121 IDILSRATTMSITRDTTLGIRFLPTDFYDGQGIMVKKNKNVKTFKDLDGMRIGVEQGTTT 180

Query: 157 ELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216
           E  +     A   K + +VFE  + I +AY A   DA+T D S L +      +  EH I
Sbjct: 181 EKNVTTKLAAVGAKANIVVFENQDSIVSAYEAGSIDAWTSDKSGLVSRLAGMSKQDEHAI 240

Query: 217 LPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRF 276
           L + +SK PL PAI  GD +W+N+  WT YA++ AEELGITQ N+ ++ K + +P ++  
Sbjct: 241 LEETLSKEPLTPAIKAGDDQWFNVTRWTLYALMQAEELGITQANVEEMVK-SDDPSIRSL 299

Query: 277 LGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLM 336
           LG +   ++G+ LGL+ DW  ++I+ +GNYGE+++R LG  S  K+ RG NALW+ GGLM
Sbjct: 300 LGAE--GDLGKNLGLSNDWVVKLIKGVGNYGEIYERTLGQGSAFKLDRGLNALWTDGGLM 357

Query: 337 YAPPI 341
           Y+PP 
Sbjct: 358 YSPPF 362


>gi|27378020|ref|NP_769549.1| amino acid binding protein [Bradyrhizobium japonicum USDA 110]
 gi|27351166|dbj|BAC48174.1| bll2909 [Bradyrhizobium japonicum USDA 110]
          Length = 337

 Score =  312 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 145/318 (45%), Positives = 208/318 (65%), Gaps = 4/318 (1%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L  +K RG L CG++ G  GF+   + G++KG DVD+CRAL++ +  D SK++Y+ L A
Sbjct: 23  TLDTVKSRGTLVCGVSAGFAGFSAPDSQGNYKGLDVDYCRALAAGVLGDASKVRYVSLTA 82

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
           + RF ALQS +ID+L RN+  T LR ++LGL   PI ++DGQGF++ K  G+  +  L G
Sbjct: 83  QNRFTALQSGEIDVLYRNSTQTYLRGVTLGLRQGPINFYDGQGFVVKKDLGVKDIKDLKG 142

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           A++CV  GTT E+TL DY +A+ + + P+VF+RV+ +   +   RCDA T D SAL    
Sbjct: 143 ATVCVAQGTTHEVTLGDYGRANGIDWKPLVFDRVDTMYQTFFGGRCDAMTQDASALAGAV 202

Query: 206 LT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
            T    P+++V+LP  ISK PL P    GD  W +I++W HY ++ AEELG+TQ N++++
Sbjct: 203 TTAAPNPADYVVLPQTISKEPLGPFTRNGDEVWSDIITWLHYGLIEAEELGVTQANVDEM 262

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
           +K  T P +QR LG   S ++G  LGL   W    I+  GNYGE+++RN+G  S LK+ R
Sbjct: 263 AKSQT-PAIQRLLGA--SGDLGSRLGLDNKWLVTAIKATGNYGEIYERNVGKASPLKLDR 319

Query: 325 GYNALWSKGGLMYAPPIR 342
           G N LWSKGGLMYA P +
Sbjct: 320 GLNGLWSKGGLMYAVPFK 337


>gi|156741676|ref|YP_001431805.1| extracellular solute-binding protein [Roseiflexus castenholzii DSM
           13941]
 gi|156233004|gb|ABU57787.1| extracellular solute-binding protein family 3 [Roseiflexus
           castenholzii DSM 13941]
          Length = 411

 Score =  312 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 131/323 (40%), Positives = 199/323 (61%), Gaps = 10/323 (3%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN- 84
           L  +K+RG+L CG N  L GF         W GFDVDFCRA+++AIF D +K++++ L  
Sbjct: 92  LARVKERGYLICGTNADLPGFGFYDNVRQAWSGFDVDFCRAVAAAIFGDATKVEFVALGT 151

Query: 85  ---AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
                 RF A++  ++D+L RNT WTL R    GLAF P T+ DGQ F++  +  I+ + 
Sbjct: 152 GPGPNNRFDAVREGRVDVLFRNTTWTLGRN-ISGLAFGPTTFHDGQTFMVRIRDRITKLE 210

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
            L+G  ICV  GTT+E  L D F A  +++   V    +E+  AY    CDA T D S L
Sbjct: 211 DLAGKVICVAKGTTSEQNLNDDFAARGIQFTARVLNGEDELYPAYDEGECDAVTSDSSQL 270

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
            A +     P++H+IL D IS+ PL P I + D +W +++SWT +A + AEEL + Q+N+
Sbjct: 271 AAKRQQLKNPADHIILGDRISREPLGPVIARDDNQWLDVISWTVFATIYAEELRVDQRNV 330

Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
           +++   TT+P ++R LG++   N GE LGL  D+ Y+II+ +GNYG++++RNLG  + + 
Sbjct: 331 DRLRASTTDPRIKRLLGLE--GNFGEGLGLPNDFAYQIIKQVGNYGDIYNRNLGPNTVIN 388

Query: 322 IPRGYNALWS--KGGLMYAPPIR 342
           + RG N +W+   GG++ +PP R
Sbjct: 389 LDRGPNKVWNLGAGGVLASPPFR 411


>gi|3182934|sp|Q52663|BZTA_RHOCA RecName: Full=Glutamate/glutamine/aspartate/asparagine-binding
           protein BztA; Flags: Precursor
 gi|1655712|gb|AAB17886.1| BztA [Rhodobacter capsulatus SB 1003]
          Length = 338

 Score =  311 bits (797), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 154/342 (45%), Positives = 221/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F     + +    + + +AS L D+K RG L CG N GL GFA   ANG ++GFD
Sbjct: 1   MKKSVFFG--SVALAALVAGAASASTLDDVKARGQLICGSNPGLTGFAAPDANGVYQGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  C+A+++A+  DP K++Y+PL  + RF AL S ++D+L RN+ WT  R+  L L F  
Sbjct: 59  VAVCKAVAAAVLGDPMKVKYVPLTGETRFTALASGEVDVLVRNSTWTFSRDTELALDFVA 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF+++K  G+SS  +L GA+ICVQ GTTTE+ LAD+FKA+NM Y P+      
Sbjct: 119 VNYYDGQGFMVNKSLGVSSAKELDGATICVQTGTTTEMNLADFFKANNMTYTPVNIADDA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    + A  CD+YT D S L + + T    ++ VILP+IISK PL P +  GD  W +I
Sbjct: 179 EGQQKFAAGACDSYTTDASGLASSRATLPNAADIVILPEIISKEPLGPVVRHGDNNWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+ YA+V AEE GIT+ N+ +V+  T NP+++R LG++   ++G+ +GL  D+  R I
Sbjct: 239 VRWSFYALVAAEEYGITKANLEEVAASTQNPEIRRLLGLE--GDMGKKIGLDNDFAKRAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F+ N+G  + + + RG NA W++GGLMYAPP R
Sbjct: 297 LASGNYGEVFEANIGASTSIGLARGLNAQWTQGGLMYAPPFR 338


>gi|331005342|ref|ZP_08328727.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [gamma proteobacterium IMCC1989]
 gi|330420839|gb|EGG95120.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [gamma proteobacterium IMCC1989]
          Length = 336

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 145/341 (42%), Positives = 216/341 (63%), Gaps = 6/341 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     +  + + +LF  +    A  L D+++RGF+ CG++ GL GF++    G W G D
Sbjct: 1   MK---LLKTIIVGVLFLAALGVKAGTLEDVRERGFVSCGVSDGLTGFSQKNDKGVWSGLD 57

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A+F D  K+ Y PL AKERF+ALQS ++D+LSRNT WTL R++++GL F  
Sbjct: 58  VDVCRAVAAAVFSDADKVAYKPLTAKERFVALQSNEVDLLSRNTTWTLTRDVAMGLKFAG 117

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           I Y+DGQGF++ ++ G+SS  +L GAS CVQAG+T+E+ +  +F  +NM Y   +F++  
Sbjct: 118 INYYDGQGFLVSQELGVSSAFELDGASFCVQAGSTSEVGIEIFFNNNNMTYKRRIFDKSS 177

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++        CD  + D S LY+ +     P   V+LP++ISK PL P + QGD  W+NI
Sbjct: 178 DVRDGLDKGMCDVISSDQSQLYSFRTGLMNPESFVVLPEVISKEPLGPVVRQGDDTWFNI 237

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+  AM+ AE LGIT  N++ + K       +R LG +    +     L+ DW Y II
Sbjct: 238 VRWSLVAMIEAEFLGITSLNVDILRKSGELGQ-KRLLGSE--GELSTNSSLSADWAYNII 294

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
           + +GNY E F+RN+G++S LKI RG NA W+ GG++Y+PPI
Sbjct: 295 KQVGNYSESFERNVGSESTLKIARGLNAQWNAGGILYSPPI 335


>gi|254432874|ref|ZP_05046577.1| polar amino acid transport system substrate-binding proetin
           [Cyanobium sp. PCC 7001]
 gi|197627327|gb|EDY39886.1| polar amino acid transport system substrate-binding proetin
           [Cyanobium sp. PCC 7001]
          Length = 344

 Score =  310 bits (795), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 143/346 (41%), Positives = 213/346 (61%), Gaps = 12/346 (3%)

Query: 7   VSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +++L LI L   +        ++ L  I  R  L CG+   L GF+ V+ +G + G DVD
Sbjct: 1   MALLGLIPLAACAPPDGSGLQSAKLNGITARDKLVCGVEGTLPGFSFVEPDGRYSGLDVD 60

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI--SLGLAFRP 120
            C+A+++A+  DP K++Y  LN+ ERF AL S ++D+L+RNT  TL R+     GL+F P
Sbjct: 61  TCKAVAAAVLGDPDKVEYRNLNSSERFAALASGEVDMLARNTTATLSRDAAGGNGLSFAP 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
            T++DGQG +   K GI+ +  LSG +ICV++GTTTEL LAD  +  ++ Y P+ F+  +
Sbjct: 121 TTFYDGQGVMAPVKSGITDLKGLSGKAICVESGTTTELNLADRMREIDVPYTPLKFQTSD 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           +  AAY   RC A T D S L   + +   P +H +LPD++SK PL+PA    D  W + 
Sbjct: 181 QTYAAYLGGRCAAVTSDRSQLAGKRSSFPAPDDHQLLPDVLSKEPLSPATTNADPAWADA 240

Query: 241 VSWTHYAMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296
           + W  ++++ AEE GITQ N++    +   +T   D++RF G++   + G  LGL  D+T
Sbjct: 241 LRWIVFSLMQAEEWGITQANLDSKLAEAQANTNLADLRRFFGVE--GDFGRQLGLPADFT 298

Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            R IR +GNYGE+F+RN+G  S LK+ RG N LWS+GGL+YA P R
Sbjct: 299 VRAIRAVGNYGEIFERNVGTTSRLKLERGLNRLWSEGGLIYAQPFR 344


>gi|78213330|ref|YP_382109.1| extracellular solute-binding protein [Synechococcus sp. CC9605]
 gi|78197789|gb|ABB35554.1| extracellular solute-binding protein, family 3 [Synechococcus sp.
           CC9605]
          Length = 353

 Score =  310 bits (795), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 143/354 (40%), Positives = 207/354 (58%), Gaps = 15/354 (4%)

Query: 1   MYK---DFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M++      +  L  +  F  S +       S L  +K RG L CG++  + GF+ +  +
Sbjct: 1   MFRTSSRVLIVALAGLSSFLASCASLDSAAGSRLDLVKARGELLCGVSGKIPGFSFLNPD 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G + G DVD CRA+++A   D  K+QY PL A ERF AL+S +ID+LSRNT  TL R+  
Sbjct: 61  GRYTGLDVDICRAMAAAFVGDAEKVQYRPLTAPERFTALRSGEIDLLSRNTTHTLSRDAM 120

Query: 114 --LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
              GL F P+ + DGQG +++   G+ S++ LSG SICV +GTTTE  L D F +  + Y
Sbjct: 121 GGNGLRFGPVVFHDGQGLMVNAASGVRSLADLSGKSICVGSGTTTEQNLNDAFASQGLPY 180

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
            PI ++ + ++   Y   RC+A T D S L A +     P  H IL D ISK PLAPA++
Sbjct: 181 TPIKYQDLNQVVGGYLQGRCEAMTSDRSQLAAARSGFSDPQAHQILDDRISKEPLAPAVV 240

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGE 287
            GD    + ++W   A++ AEE GITQ N++    Q + D +   ++RFLG+D    +G 
Sbjct: 241 GGDQPMGDAMTWVVNALIEAEERGITQANVDAVVKQAAADPSQTSLRRFLGVDP--GLGR 298

Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
            LGL  D+  ++IR  GNYGE+++R+LG  S + IPRG N L  +GGLM +PP 
Sbjct: 299 KLGLADDFVVQVIRATGNYGEIYNRHLGLDSAVAIPRGANRLAGEGGLMISPPF 352


>gi|163742834|ref|ZP_02150218.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis
           2.10]
 gi|161383798|gb|EDQ08183.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis
           2.10]
          Length = 347

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 140/349 (40%), Positives = 209/349 (59%), Gaps = 9/349 (2%)

Query: 1   MYKDFFV---SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M   F +   + +    L   + +   S L  +K RG L C +     GF ++  +GDW+
Sbjct: 1   MKNLFSMLSCAAMAAGGLSIAAPAAAQSTLETVKTRGHLNCQVGPPRAGFYQLLESGDWE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DV  CRA+++AIF DP+K+++  ++A  RF +L + + D+LSR   WT+ R+ +LG+ 
Sbjct: 61  GSDVAVCRAMAAAIFGDPNKVEFQSVSASVRFTSLANGESDVLSRTATWTVGRDAALGID 120

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F    + DGQGF++ K  GI S   L+GA++CV  G T+E TL D+ +A+N+    + F+
Sbjct: 121 FTAPVFHDGQGFLVRKDSGIKSAFDLTGATVCVITGHTSEATLQDFSRANNLDIQAVAFD 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
               ++  Y    CDA T D   L +       PSEHV+LP+I+SK PL PA+  GD +W
Sbjct: 181 DSAIVNETYLNGGCDAITTDKGVLASEARGFPDPSEHVVLPEILSKEPLTPAVRNGDNQW 240

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
            +IV WT +A++ AEELGITQ N+ +++ +  NP V RFLG +   N G  LGL KDW  
Sbjct: 241 GDIVQWTVFALINAEELGITQANVEEIAANPPNPLVARFLGAEGELNTG--LGLPKDWVV 298

Query: 298 RIIRHMGNYGEMFDRNLGNQSE--LKIPR--GYNALWSKGGLMYAPPIR 342
             I+ +GNYGE+++  LG+     L IPR    NALW++GGLM++PP R
Sbjct: 299 HAIKAVGNYGEIYEHYLGDGRPEALGIPRAGSANALWTEGGLMFSPPFR 347


>gi|294675892|ref|YP_003576507.1| glutamate/aspartate ABC transporter periplasmic
           glutamate/aspartate-binding protein BztA [Rhodobacter
           capsulatus SB 1003]
 gi|294474712|gb|ADE84100.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein BztA [Rhodobacter
           capsulatus SB 1003]
          Length = 338

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 154/342 (45%), Positives = 221/342 (64%), Gaps = 4/342 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F     + +    + + +AS L D+K RG L CG N GL GFA   ANG ++GFD
Sbjct: 1   MKKSAFFG--SVALAALVAGAASASTLDDVKARGQLICGSNPGLTGFAAPDANGVYQGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  C+A+++A+  DP K++Y+PL  + RF AL S ++D+L RN+ WT  R+  L L F  
Sbjct: 59  VAVCKAVAAAVLGDPMKVKYVPLTGETRFTALASGEVDVLVRNSTWTFSRDTELALDFVA 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF+++K  G+SS  +L GA+ICVQ GTTTE+ LAD+FKA+NM Y P+      
Sbjct: 119 VNYYDGQGFMVNKSLGVSSAKELDGATICVQTGTTTEMNLADFFKANNMTYTPVNIADDA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E    + A  CD+YT D S L + + T    ++ VILP+IISK PL P +  GD  W +I
Sbjct: 179 EGQQKFAAGACDSYTTDASGLASSRATLPNAADIVILPEIISKEPLGPVVRHGDNNWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W+ YA+V AEE GIT+ N+ +V+  T NP+++R LG++   ++G+ +GL  D+  R I
Sbjct: 239 VRWSFYALVAAEEYGITKANLEEVAASTQNPEIRRLLGLE--GDMGKKIGLDNDFAKRAI 296

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
              GNYGE+F+ N+G  + + + RG NA W++GGLMYAPP R
Sbjct: 297 LASGNYGEVFEANIGASTSIGLARGLNAQWTQGGLMYAPPFR 338


>gi|87120913|ref|ZP_01076805.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Marinomonas sp.
           MED121]
 gi|86163751|gb|EAQ65024.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [Marinomonas sp.
           MED121]
          Length = 325

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 138/327 (42%), Positives = 205/327 (62%), Gaps = 2/327 (0%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              +    A  L D+KKRGFL+CG      GFA    N  W+G ++D+C+ALSSA+F D 
Sbjct: 1   MGATAPVFADTLDDVKKRGFLRCGTGEAKAGFAMPGDNNQWQGMEIDYCKALSSAVFGDE 60

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           +K + +P+ +K RF +L S++ID+L + T WT  R+  LG+ F    +FDGQGF++ K+ 
Sbjct: 61  TKFEVVPVTSKVRFTSLTSREIDVLVKGTTWTYSRDAKLGVDFAAYWFFDGQGFLIKKEL 120

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           G++S  QL+GA+IC+  GTT+E  +AD+F+ ++MKY P+V +   E   A +  RCD  T
Sbjct: 121 GVTSAKQLNGATICISPGTTSEKNVADFFRTYDMKYKPVVIKAGPETLDALQKGRCDVIT 180

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D+SAL + +     P + V+L D I+K PL+  + Q D+ W ++++WT  A+V AEELG
Sbjct: 181 NDLSALASDRQKFTNPDDFVVLQDNIAKEPLSLYVRQNDSRWKDVITWTRNALVEAEELG 240

Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
           ITQ+N+ Q +K   +P V R LG       GE LGL   W +  I  +GNYGE+F+RN+G
Sbjct: 241 ITQENVGQHAKHPIDPRVARLLGAK--GAYGEMLGLPNTWAHDAISAVGNYGEIFERNVG 298

Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342
            Q+ + + R  N  W  GGL++APP R
Sbjct: 299 EQTRMGLTRNLNQQWYDGGLVFAPPFR 325


>gi|197105093|ref|YP_002130470.1| lysine-arginine-ornithine-binding periplasmic protein
           [Phenylobacterium zucineum HLK1]
 gi|196478513|gb|ACG78041.1| lysine-arginine-ornithine-binding periplasmic protein
           [Phenylobacterium zucineum HLK1]
          Length = 337

 Score =  310 bits (793), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 146/324 (45%), Positives = 221/324 (68%), Gaps = 4/324 (1%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
           +T +  L  +++RG + CG++ GL GFA   A G W+GFDVD CRA+++A+F D  ++++
Sbjct: 16  ATPSPTLEAVRRRGRVTCGVHPGLPGFAMRDARGIWRGFDVDVCRAVAAAVFGDAERVRF 75

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +P++  +RF  L++++IDILSRNT  TL R+  LGL F   TY+DGQGF++ +  G++S 
Sbjct: 76  VPIDGSDRFRELRAERIDILSRNTSLTLSRDAGLGLTFPATTYYDGQGFLVARALGVASA 135

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
            +L GA +CVQAGT +E  LAD+F+A  + Y P++ +  E+    Y +  CD ++ DIS 
Sbjct: 136 EELGGARVCVQAGTASETNLADFFRARGLDYQPVLAKSEEDARRLYESDGCDVFSADISG 195

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
           L A +     P+ HVILP++ISK PL P + Q D  W +IV+WT +A+V AEELG++ + 
Sbjct: 196 LAASRSLLSNPNGHVILPNVISKEPLGPVVRQDDPAWADIVAWTVHAIVLAEELGLSSRT 255

Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320
           + Q  +  T+P+ +R LG++   N+GE LG+ +DW Y++IR +G Y E+F R+LG  S L
Sbjct: 256 VEQARETATDPETRRLLGVE--GNLGELLGVRRDWAYQVIRQVGAYHEIFRRDLGADSAL 313

Query: 321 KIPRGYNALWS--KGGLMYAPPIR 342
           K+ RG NALW+  K GLMYAPP+R
Sbjct: 314 KLERGLNALWTAPKPGLMYAPPVR 337


>gi|123966465|ref|YP_001011546.1| ABC transporter for amino acids, substrate binding protein
           [Prochlorococcus marinus str. MIT 9515]
 gi|123200831|gb|ABM72439.1| ABC transporter for amino acids, substrate binding protein
           [Prochlorococcus marinus str. MIT 9515]
          Length = 349

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 141/350 (40%), Positives = 208/350 (59%), Gaps = 11/350 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M    F  I    +L     S      S L  I+KR  L CG++  + GF+ ++ +G +K
Sbjct: 1   MINRLFFGIAAFGLLLTGCASNQQENISRLSLIQKRDELICGVSGKIPGFSFIERDGKYK 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL- 116
           G DVD C+A +SAI  D  KIQ+ PL A ERFLA+++  ID+LSRNT +TL R+   G  
Sbjct: 61  GLDVDICKAFASAIIGDSEKIQFRPLTAAERFLAIKTGDIDLLSRNTTFTLSRDSFEGNG 120

Query: 117 -AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
             F P+ + DGQG ++ K  GI S+ +L+  SICV +GTTTE  + D F++ ++ Y PI 
Sbjct: 121 LTFAPVVFHDGQGLMVKKNSGIDSIQELANKSICVGSGTTTEQNINDTFESLSLPYVPIK 180

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++ + ++ A Y   RC+A T D S L A +       +H+IL +++SK PLAPA    + 
Sbjct: 181 YQDLNQVVAGYLQGRCEAMTSDRSQLAAARSGFKNAKDHIILDNVLSKEPLAPASNGSEQ 240

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQ----VSKDTTNPDVQRFLGIDKSSNIGEALGL 291
           +  + + WT +A++ AEE GITQ NI+        +     ++RFLGID    +GE +GL
Sbjct: 241 KLADAMRWTIFALIAAEEQGITQLNIDDKVQLAKNNPQLKSLRRFLGID--GGLGEKIGL 298

Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
             D+   +I+  GNYGE++DRNLG  S++ IPRG N ++SKGGL  +PP 
Sbjct: 299 RNDFVVNVIKATGNYGEIYDRNLGKDSDVPIPRGLNKIYSKGGLHISPPF 348


>gi|33594685|ref|NP_882329.1| putative ABC transporter periplasmic amino acid-binding protein
           [Bordetella pertussis Tohama I]
 gi|33598479|ref|NP_886122.1| putative ABC transporter periplasmic amino acid-binding protein
           [Bordetella parapertussis 12822]
 gi|33603422|ref|NP_890982.1| putative ABC transporter periplasmic amino acid-binding protein
           [Bordetella bronchiseptica RB50]
 gi|33564761|emb|CAE44086.1| putative ABC transporter periplasmic amino acid-binding protein
           [Bordetella pertussis Tohama I]
 gi|33574608|emb|CAE39258.1| putative ABC transporter periplasmic amino acid-binding protein
           [Bordetella parapertussis]
 gi|33577546|emb|CAE34811.1| putative ABC transporter periplasmic amino acid-binding protein
           [Bordetella bronchiseptica RB50]
          Length = 338

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 144/324 (44%), Positives = 227/324 (70%), Gaps = 3/324 (0%)

Query: 19  SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKI 78
           S +   +   ++KK+GF++CG++TG+ GF+   + G+WKG DVD CRA+++ +F D SK 
Sbjct: 18  SVAHAGATFDNVKKKGFVQCGVSTGIPGFSIADSKGEWKGLDVDMCRAIAATMFGDASKF 77

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGIS 138
           +  PLN ++RF ALQS ++D+L+RNT  TL R+ +LGL    + Y+D QG ++ K+ G+ 
Sbjct: 78  KVTPLNTQQRFTALQSGEVDVLTRNTTVTLTRDTTLGLIGVGVNYYDSQGVMVSKELGVK 137

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           S  +L+GA++CVQ GTTTEL LAD+F+ + +++ P+V ++ +EI  A+ A RCDA+T D 
Sbjct: 138 SAKELNGATVCVQPGTTTELNLADWFRGNKIEFKPVVIDKYDEIVRAFSAGRCDAFTTDK 197

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           S L + + T ++P  +VILP+  SK PL P + QGD +W+N+V W+  AM+ AEE GIT 
Sbjct: 198 SQLASTRTTLEKPDNYVILPEDFSKEPLGPMVRQGDEQWFNVVRWSLNAMLEAEEYGITS 257

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
           KN+++++K ++NP++QR LG+  +  +G+ LG+   W + II+ +GNYGE F+  LG  S
Sbjct: 258 KNVDEMAK-SSNPNIQRILGV--TPGMGKNLGVDDKWAFNIIKQVGNYGESFEATLGKSS 314

Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342
            +K+ RG NA + +GGLMY  P+R
Sbjct: 315 AMKLERGLNASYKQGGLMYGWPVR 338


>gi|114771237|ref|ZP_01448657.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [alpha
           proteobacterium HTCC2255]
 gi|114548162|gb|EAU51049.1| glutamate/glutamine/aspartate/asparagine ABC transporter,
           periplasmic substrate-binding protein [alpha
           proteobacterium HTCC2255]
          Length = 339

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 148/343 (43%), Positives = 211/343 (61%), Gaps = 5/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F     +    F +    A  L D++  G LKCG+ TGL GFA   ANG W GFD
Sbjct: 1   MKKSAFFG--TIAAATFAAGFAAAGTLEDVQAAGELKCGVTTGLAGFALADANGVWDGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           V  CRA+++A+  D + ++++P   K RF AL S +ID+L+RNT WT  R++ L   F  
Sbjct: 59  VAVCRAVAAAVLGDGNAVKFVPTTGKTRFTALASGEIDLLARNTTWTFSRDVDLKFEFVG 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF+  K  G+SS   L GA++C+Q GTTTEL LAD+F+++N+ Y P+  E   
Sbjct: 119 VNYYDGQGFMAPKALGVSSAKDLDGATVCIQTGTTTELNLADFFRSNNISYEPVPIETNA 178

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E  A Y A  CD +T D S L + + T + P +H++LP+I+SK PL P +  GD  W +I
Sbjct: 179 EAQAQYLAGACDVFTTDASGLASTRATFENPDDHIVLPEIVSKEPLGPLVRHGDNNWGDI 238

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDT-TNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
             WT  A++TAEELG+T  N+ + + +   NP+V R LG +   ++G  LGL K W  R 
Sbjct: 239 ARWTLNALITAEELGVTSANVAEHTANAGNNPEVNRLLGTE--GDLGGMLGLDKQWASRA 296

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I   GNYGE+F++N+G  + + I RG NA W+ GGL+Y+ P R
Sbjct: 297 IAVNGNYGEIFEKNIGVNTPIGIARGLNASWTNGGLIYSAPFR 339


>gi|152994191|ref|YP_001339026.1| extracellular solute-binding protein [Marinomonas sp. MWYL1]
 gi|150835115|gb|ABR69091.1| extracellular solute-binding protein family 3 [Marinomonas sp.
           MWYL1]
          Length = 343

 Score =  309 bits (792), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 132/325 (40%), Positives = 209/325 (64%), Gaps = 4/325 (1%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +   S L  +K+RG++ C I     GF  +   G+W+G D+D CR ++SA+F D SK++
Sbjct: 21  AADTTSTLDAVKERGYVNCVIGNSFPGFYSLNKAGEWQGMDIDMCRGVASAVFGDASKVK 80

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           +LP+   + F +++S + DILS+   WTL R+ + GL F    ++DGQGF++ K  G+ S
Sbjct: 81  FLPVQWAQSFTSIKSGKGDILSKGMTWTLSRDSAQGLDFLDTYFYDGQGFMVRKDLGVKS 140

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           V +L+GA++CV  GT++EL +ADY +A+N+    +VF+     + A+  + CDA T D S
Sbjct: 141 VKELNGATVCVLTGTSSELNIADYSRANNLDIKTVVFDDSSVRNTAFFNNNCDALTNDKS 200

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            L A +     P+++VILP+ ISK  L+ A+ Q D+EW N+V WT  AMV AEE G+  +
Sbjct: 201 GLAAQRSAAPNPNDYVILPETISKEALSFAVKQNDSEWANVVKWTFAAMVAAEEFGVNSQ 260

Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319
           N+ ++  ++ +P V+R LG++   N G  LGL +DW +++I+++GNYGE+++RN+G  S 
Sbjct: 261 NVEKMRAESQSPVVRRLLGVEGDLNTG--LGLPQDWAFQVIKNVGNYGEVYERNVGTDSV 318

Query: 320 LKIPR--GYNALWSKGGLMYAPPIR 342
           L + R    N LW+KGGLMYA   R
Sbjct: 319 LGLDREGTLNELWTKGGLMYAKSFR 343


>gi|221370067|ref|YP_002521163.1| Extracellular solute-binding protein, family 3 precursor
           [Rhodobacter sphaeroides KD131]
 gi|221163119|gb|ACM04090.1| Extracellular solute-binding protein, family 3 precursor
           [Rhodobacter sphaeroides KD131]
          Length = 335

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 129/323 (39%), Positives = 206/323 (63%), Gaps = 4/323 (1%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
           F+ +   L  +K+RG + CG++    GFA   + G W GF+VDFC A+++A+F D +K++
Sbjct: 15  FAQSGDTLAAVKERGEVLCGVHPARHGFAAPDSQGKWSGFEVDFCHAIAAAVFGDANKVR 74

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           ++ L++++RF A+QS ++D+L+RN   TL R+ +LGL F P  ++ G GF++    GI  
Sbjct: 75  FVALSSQQRFPAIQSGEVDVLARNVTATLSRDTALGLNFAPPIFYTGTGFLVRAADGIEK 134

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           V  L GA+IC+  G+TTE  +A  F A  + Y P+V E  +++  AY   RCDA T D +
Sbjct: 135 VEDLDGAAICMAPGSTTERNVAQIFAARGLSYTPVVIENNKQLVDAYVTGRCDALTKDKA 194

Query: 200 ALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           AL  ++  +   P +HV+LP I SK PLA A+ QGD +WY++V W  YA   AEELG+TQ
Sbjct: 195 ALPGVRAFDTEVPGDHVLLPGIYSKEPLAMAVRQGDDKWYDLVKWVTYATFNAEELGVTQ 254

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
            N++++ K + +PD+Q  LG+    + G  LG+  DW Y I++ +GNY +++ R+ G  +
Sbjct: 255 ANVDEM-KASDDPDIQTLLGV--IGDNGTKLGVPNDWAYAIVKQVGNYEDIYMRHFGPDT 311

Query: 319 ELKIPRGYNALWSKGGLMYAPPI 341
            + + R  N LW++GGL+Y  P+
Sbjct: 312 PVALDRDQNQLWTEGGLLYGFPM 334


>gi|293602099|ref|ZP_06684552.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Achromobacter piechaudii ATCC
           43553]
 gi|292819501|gb|EFF78529.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Achromobacter piechaudii ATCC
           43553]
          Length = 357

 Score =  309 bits (791), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 142/317 (44%), Positives = 223/317 (70%), Gaps = 3/317 (0%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
              ++KK+GF++CG++TG+ GF+   + G++KG DVD CRA++S +F D +K+++ PLN 
Sbjct: 44  TFDNVKKKGFVQCGVSTGIPGFSIADSKGEYKGIDVDMCRAIASTMFGDATKVKFTPLNT 103

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
           ++RF ALQS ++D+L+RNT  TL R+ +LGL    + Y+D QG ++ K   + S  +L+G
Sbjct: 104 QQRFTALQSGEVDVLTRNTTVTLTRDTTLGLIGVGVNYYDSQGVMVSKDLNVKSAKELNG 163

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           A+ICVQ GTTTEL LAD+F+   +++ P+V ++ +EI  A+ A RCDA+T D S L + +
Sbjct: 164 ATICVQPGTTTELNLADWFRGQKIEFKPVVIDKYDEIIRAFSAGRCDAFTTDKSQLASTR 223

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
            T + P + VILP+  SK PL P + QGD +W+N+V W+  AM+ AEE GIT+ N+++++
Sbjct: 224 TTLENPDKFVILPEDFSKEPLGPMVRQGDEQWFNVVRWSLNAMLEAEEYGITKANVDEMT 283

Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325
           K ++NP++QR LG+  +  +G+ LG+   W Y II+++GNYGE F+  LG  S +K+ RG
Sbjct: 284 K-SSNPNIQRILGV--TPGMGKNLGVDDKWAYNIIKNVGNYGESFEATLGKGSAMKLERG 340

Query: 326 YNALWSKGGLMYAPPIR 342
            NA + +GGLMY  P+R
Sbjct: 341 LNASYKQGGLMYGWPVR 357


>gi|126464337|ref|YP_001045450.1| extracellular solute-binding protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|126106148|gb|ABN78678.1| extracellular solute-binding protein, family 3 [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 345

 Score =  309 bits (791), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 129/323 (39%), Positives = 206/323 (63%), Gaps = 4/323 (1%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
           F+ +   L  +K+RG + CG++    GFA   + G W GF+VDFC A+++A+F D +K++
Sbjct: 25  FAQSGDTLAAVKERGEVLCGVHPARHGFAAPDSQGKWSGFEVDFCHAIAAAVFGDANKVR 84

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           ++ L++++RF A+QS ++D+L+RN   TL R+ +LGL F P  ++ G GF++    GI  
Sbjct: 85  FVALSSQQRFPAIQSGEVDVLARNVTATLSRDTALGLNFAPPIFYTGTGFLVRAADGIEK 144

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
           V  L GA+IC+  G+TTE  +A  F A  + Y P+V E  +++  AY   RCDA T D +
Sbjct: 145 VEDLDGAAICMAPGSTTERNVAQIFAARGLSYTPVVIENNKQLVDAYVTGRCDALTKDKA 204

Query: 200 ALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           AL  ++  +   P +HV+LP I SK PLA A+ QGD +WY++V W  YA   AEELG+TQ
Sbjct: 205 ALPGVRAFDTEVPGDHVLLPGIYSKEPLAMAVRQGDDKWYDLVKWVTYATFNAEELGVTQ 264

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
            N++++ K + +PD+Q  LG+    + G  LG+  DW Y I++ +GNY +++ R+ G  +
Sbjct: 265 ANVDEM-KASDDPDIQTLLGV--IGDNGTKLGVPNDWAYAIVKQVGNYEDIYMRHFGPDT 321

Query: 319 ELKIPRGYNALWSKGGLMYAPPI 341
            + + R  N LW++GGL+Y  P+
Sbjct: 322 PVALDRDQNQLWTEGGLLYGFPM 344


>gi|33865374|ref|NP_896933.1| ABC transporter, substrate binding protein for amino acids
           [Synechococcus sp. WH 8102]
 gi|33632543|emb|CAE07355.1| ABC transporter, substrate binding protein for amino acids
           [Synechococcus sp. WH 8102]
          Length = 353

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 140/349 (40%), Positives = 201/349 (57%), Gaps = 12/349 (3%)

Query: 3   KDFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           +   +  + ++       +       S L  +K+R  L CG++  + GF+ +   G + G
Sbjct: 6   RRILIGAITVVAGLLGGCASLDEAGRSRLDLVKQRDELLCGVSGKIPGFSFLTPKGTYTG 65

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGL 116
            DVD CRA+++A   D  K+QY PL A ERF AL+S +ID+LSRNT  TL R+     GL
Sbjct: 66  LDVDICRAMAAAFLGDADKVQYRPLTAPERFTALRSGEIDLLSRNTTHTLSRDAEGGNGL 125

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F P+ + DGQG I+    G++S++ LSG +ICV +GTTTE  L D F +  + Y PI +
Sbjct: 126 GFAPVVFHDGQGLIVPVNSGVTSLADLSGQAICVGSGTTTEQNLNDAFASKGIPYTPIKY 185

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           + + ++   Y   RC A T D S L A +     P  HVIL D +SK PLAPA++ GD  
Sbjct: 186 QDLNQVVGGYLQGRCQAMTSDRSQLAAARSGFIEPEGHVILEDRLSKEPLAPAVVGGDQR 245

Query: 237 WYNIVSWTHYAMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGEALGLT 292
             + ++W  YA++ AEE GITQ N++        D +   ++RFLG+D    +G  LGL 
Sbjct: 246 LVDAMTWVVYALIEAEERGITQANLDRQLRAAEADPSQAAMRRFLGVD--GGLGRKLGLP 303

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
            D+  + IR  GNYGE++DR+LG +S + IPRG N L   GGLM APP 
Sbjct: 304 DDFVVQAIRATGNYGEIYDRHLGPESPVAIPRGANRLAEDGGLMIAPPF 352


>gi|311109074|ref|YP_003981927.1| general L-amino acid-binding periplasmic protein AapJ 4
           [Achromobacter xylosoxidans A8]
 gi|310763763|gb|ADP19212.1| general L-amino acid-binding periplasmic protein AapJ 4
           [Achromobacter xylosoxidans A8]
          Length = 338

 Score =  308 bits (790), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 143/317 (45%), Positives = 221/317 (69%), Gaps = 3/317 (0%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
              ++KK+GF++CG++TG+ GF+   + G++KG DVD CRA++S +F D +K+++ PLN 
Sbjct: 25  TFDNVKKKGFVQCGVSTGIPGFSIADSKGEYKGIDVDLCRAIASTMFGDATKVKFTPLNT 84

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
           ++RF ALQS ++D+L+RNT  TL R+ +LGL    + Y+D QG ++ K   + S  +L+G
Sbjct: 85  QQRFTALQSGEVDVLTRNTTVTLTRDTTLGLIGVGVNYYDSQGVMVSKDLNVKSAKELNG 144

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           A+ICVQ GTTTEL LAD+F+   +++ P+V ++ +EI  A+ A RCDA+T D S L + +
Sbjct: 145 ATICVQPGTTTELNLADWFRGQKIEFKPVVIDKYDEIIRAFSAGRCDAFTTDKSQLASTR 204

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
            T + P + VILP+  SK PL P + QGD +W+NIV W+  AM+ AEE GIT+ N+++++
Sbjct: 205 TTLENPDKFVILPEDFSKEPLGPMVRQGDEQWFNIVRWSLNAMLEAEEYGITKANVDEMA 264

Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325
           K + NP++QR LG+  +  +G+ LG+   W Y II+++GNYGE F+  LG  S +K+ RG
Sbjct: 265 K-SPNPNIQRILGV--TPGMGKNLGVDDKWAYNIIKNVGNYGESFENTLGKSSAMKLERG 321

Query: 326 YNALWSKGGLMYAPPIR 342
            NA +  GGLMY  P+R
Sbjct: 322 LNASYKNGGLMYGWPVR 338


>gi|47114851|emb|CAE48356.1| unnamed protein product [Methylocystis sp. SC2]
          Length = 343

 Score =  308 bits (789), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 145/319 (45%), Positives = 213/319 (66%), Gaps = 4/319 (1%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
              L  I KRG+L CG++    GFA+    G+W+GFDVDFCRA++SA+ DDP+K +++ L
Sbjct: 29  GPTLAQIMKRGYLTCGVS-DAPGFAQRDGAGEWRGFDVDFCRAVASAVLDDPNKARFVEL 87

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           + KER  ALQ+  +D+L   + WT  R+ S  L +  I   DGQGF++ +++  +SV  L
Sbjct: 88  SQKERAGALQAGAVDLLVSASPWTQARDTSHRLIYAAIFLHDGQGFLVRRQRKTASVQDL 147

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
            GASICV+ GT  EL +AD+F+A   KY P +F  +E+   AY   +CDA T D+S L+ 
Sbjct: 148 DGASICVEQGTPYELAVADFFRARKEKYDPKLFPSLEDAAKAYDEEKCDALTADVSTLHG 207

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
           +++    P++H +LPDI+SKSP  P + QGD +W NIV WT +AM+ AEEL +++ N + 
Sbjct: 208 VRIGLTAPADHAVLPDILSKSPRGPLVRQGDDQWLNIVRWTLFAMIDAEELEVSKANADA 267

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323
               + NP ++R LG+D     G+ LGL++DW YRI++H+GNY ++F+RNLG  +   + 
Sbjct: 268 AL-SSENPQIRRLLGVD--GAHGDDLGLSQDWAYRIVKHVGNYADVFERNLGRGAPYAME 324

Query: 324 RGYNALWSKGGLMYAPPIR 342
           R  NALW+KGGLMYAPP+R
Sbjct: 325 RRLNALWNKGGLMYAPPVR 343


>gi|78779551|ref|YP_397663.1| extracellular solute-binding protein [Prochlorococcus marinus str.
           MIT 9312]
 gi|78713050|gb|ABB50227.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Prochlorococcus marinus str. MIT 9312]
          Length = 349

 Score =  308 bits (789), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 140/350 (40%), Positives = 206/350 (58%), Gaps = 11/350 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M    F  I    +L     S      S L  I++R  L CG++  + GF+ ++ +G +K
Sbjct: 1   MMNRLFFGIAAFGLLLTGCASNQNDNISRLSLIQERDELICGVSGKIPGFSFIERDGSYK 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LG 115
           G DVD C+A ++AI  D  KIQ+ PL A ERFLA+++  ID+LSRNT  TL R+     G
Sbjct: 61  GLDVDICKAFAAAIIGDSEKIQFRPLTAAERFLAIKTGDIDLLSRNTTLTLSRDSFGGNG 120

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           L F P+ + DGQG ++ K  GI S+ +L+  SICV +GTTTE  + D F++ ++ Y PI 
Sbjct: 121 LTFAPVVFHDGQGLMVKKNSGIESIQELANKSICVGSGTTTEQNINDTFESLSLPYVPIK 180

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++ + ++ A Y   RC A T D S L A +       +H+IL D++SK PLAPA    + 
Sbjct: 181 YQDLNQVVAGYLQGRCQAMTSDRSQLAAARSGFKNAKDHIILDDVLSKEPLAPASDGSEQ 240

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQ----VSKDTTNPDVQRFLGIDKSSNIGEALGL 291
           +  + + WT +A++ AEE GITQ NI         +     ++RFLG+D    +GE +GL
Sbjct: 241 KLADAMRWTVFALIAAEEQGITQSNIADRLQLAKNNPQLKSLRRFLGVD--GGLGEKIGL 298

Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
             D+   +I+  GNYGE++DRNLG  S++ IPRG N ++SKGGL  +PP 
Sbjct: 299 RNDFVVNVIKATGNYGEIYDRNLGIDSDVPIPRGLNEIYSKGGLHISPPF 348


>gi|82545639|ref|YP_409586.1| periplasmic binding transport protein [Shigella boydii Sb227]
 gi|81247050|gb|ABB67758.1| putative periplasmic binding transport protein [Shigella boydii
           Sb227]
          Length = 321

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 149/321 (46%), Positives = 216/321 (67%), Gaps = 18/321 (5%)

Query: 38  CGINTGLVGFAEVKANGDWKGFDVDF----------------CRALSSAIFDDPSKIQYL 81
           CGI+ GL+GF+   A+G + G DVD                 CR++++A+F D +K++Y 
Sbjct: 3   CGISDGLLGFSYADADGKFSGIDVDVDVDVDVDVDVDVDVDVCRSVAAAVFGDDTKVKYT 62

Query: 82  PLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVS 141
           PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF  +TY+DG GF+ H K G+ S  
Sbjct: 63  PLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAK 122

Query: 142 QLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISAL 201
           +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R +E   A  + RCD    D S L
Sbjct: 123 ELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQL 182

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
           YAL++    P+E ++LP++ISK PL P + +GD EW++IV WT +AM+ AEE+GI  +N+
Sbjct: 183 YALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNV 242

Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
           ++ + +   PD+   LG +   + G+ L L   W Y II+ +GNY E+F+RN+G++S LK
Sbjct: 243 DEKAANPATPDMAHLLGKE--GDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLK 300

Query: 322 IPRGYNALWSKGGLMYAPPIR 342
           I RG N LW+ GG+ YAPP+R
Sbjct: 301 IKRGQNNLWNNGGIQYAPPVR 321


>gi|72382453|ref|YP_291808.1| extracellular solute-binding protein [Prochlorococcus marinus str.
           NATL2A]
 gi|72002303|gb|AAZ58105.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Prochlorococcus marinus str. NATL2A]
          Length = 353

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 141/354 (39%), Positives = 213/354 (60%), Gaps = 15/354 (4%)

Query: 1   MYKDF-------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K          V +  L     T+   N+S L  IK R  L CG++  + GF+ +K++
Sbjct: 1   MIKKIMRRLVSVIVGLAALSAGCATTNQDNSSRLNLIKNRNELICGVSGKIPGFSFLKSD 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G ++G DVD C+A ++AI  D  KIQY PL A ERF A+++ +ID+LSRNT +TL R+ S
Sbjct: 61  GTYQGLDVDICKAFAAAIIGDSEKIQYRPLTAAERFTAIKTGEIDLLSRNTTFTLSRDSS 120

Query: 114 --LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
              GL F P+ + DGQG ++ K+  IS +  L+  SICV +GTTTE  + D F++ ++ Y
Sbjct: 121 GGNGLTFAPVVFHDGQGLMVKKESKISGLKDLANKSICVGSGTTTEQNINDAFESASLPY 180

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
            PI ++ + ++ A Y   RC A T D S L A +     P EH+IL D++SK PLAPA  
Sbjct: 181 TPIKYQDLNQVVAGYLQGRCSAMTSDRSQLAAARSGFKNPQEHIILDDVLSKEPLAPASD 240

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQ----VSKDTTNPDVQRFLGIDKSSNIGE 287
             D +  + + W  +++++AEE GIT+ NI++       +     ++RFLGID    +GE
Sbjct: 241 GQDQKLADAMRWVVFSLISAEEQGITKSNIDKKVQIAKNNPQLKPLRRFLGID--GGLGE 298

Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
            +GL+ D+  ++I   GNYGE+++R+LG  SE+ IPRG N L+ KGG+  +PP 
Sbjct: 299 KIGLSNDFVVKVISSTGNYGEIYERHLGQNSEVPIPRGQNELYKKGGVHISPPF 352


>gi|260434256|ref|ZP_05788226.1| general L-amino acid-binding periplasmic protein AapJ
           [Synechococcus sp. WH 8109]
 gi|260412130|gb|EEX05426.1| general L-amino acid-binding periplasmic protein AapJ
           [Synechococcus sp. WH 8109]
          Length = 368

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 141/354 (39%), Positives = 207/354 (58%), Gaps = 15/354 (4%)

Query: 1   MYK---DFFVSILCLIILFFTSFS----TNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M++      +  L  +  F  S +       S L  +K RG L CG++  + GF+ + ++
Sbjct: 16  MFRSSSRVLIVALAGLSSFLASCASLDSAAGSRLDLVKARGELLCGVSGKIPGFSFLSSD 75

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G + G DVD CRA+++A   D  K+QY PL A ERF AL+S +ID+LSRNT  TL R+  
Sbjct: 76  GRYTGLDVDICRAMAAAFVGDAEKVQYRPLTAPERFTALRSGEIDLLSRNTTHTLSRDAV 135

Query: 114 --LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
              GL F P+ + DGQG +++   G+ S++ LSG SICV +GTTTE  L D F +  + Y
Sbjct: 136 GGNGLRFGPVVFHDGQGLMVNAASGVRSLADLSGKSICVGSGTTTEQNLNDAFASKGLPY 195

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
            PI ++ + ++   Y   RC A T D S L A +     P  H IL D ISK PL+PA++
Sbjct: 196 IPIKYQDLNQVVGGYLQGRCAAMTSDRSQLAAARSGFSDPEAHQILDDRISKEPLSPAVV 255

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGE 287
            GD    + ++W    ++ AEE GITQ N++    Q + D++   ++RFLG+D    +G 
Sbjct: 256 GGDQPMGDAMTWVINGLIEAEERGITQANVDAVVKQAAADSSQTALRRFLGVDP--GLGR 313

Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
            LGL  D+  ++IR  GNYGE+++R+LG  S + IPRG N L  +GGLM +PP 
Sbjct: 314 KLGLADDFVVQVIRATGNYGEIYNRHLGPDSAVAIPRGANRLAGEGGLMISPPF 367


>gi|163854807|ref|YP_001629105.1| putative extracellular solute-binding protein [Bordetella petrii
           DSM 12804]
 gi|163258535|emb|CAP40834.1| putative extracellular solute-binding protein [Bordetella petrii]
          Length = 338

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 145/317 (45%), Positives = 220/317 (69%), Gaps = 3/317 (0%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
               +KK+GF++CG++TG+ GF+   + G+WKG DV  CRA+++ +F+D +K +  PLN 
Sbjct: 25  TFDSVKKKGFVQCGVSTGIPGFSMADSKGEWKGIDVAMCRAIAATMFNDSTKFKVTPLNT 84

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
           ++RF ALQS ++D+L+RNT  TL R+ +LGL    + Y+D QG ++ K  G+ S  +L+G
Sbjct: 85  QQRFTALQSGEVDVLTRNTTQTLTRDTTLGLIGAGVNYYDSQGVMVSKDLGVKSAKELNG 144

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           A+ICVQ GTTTEL LAD+F+   +++ P+V ++ +EI  A+ A RCDA+T D S L + +
Sbjct: 145 ATICVQPGTTTELNLADWFRGQKIEFKPVVIDKYDEIIRAFSAGRCDAFTTDKSQLASTR 204

Query: 206 LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS 265
            T + P   VILP+  SK PL P + QGD +W+NIV W+  AM+ AEE GIT KN+++++
Sbjct: 205 TTLENPDNFVILPEDFSKEPLGPMVRQGDEQWFNIVRWSLNAMLEAEEYGITSKNVDEMA 264

Query: 266 KDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRG 325
           K ++NP++QR LG+  +  +G+ LG+   W Y II+ +GNYGE+F+R LG  S +K+ RG
Sbjct: 265 K-SSNPNIQRILGV--TPGMGKNLGVDDKWAYTIIKQVGNYGEVFERTLGADSAMKLERG 321

Query: 326 YNALWSKGGLMYAPPIR 342
            NA +  GGLMY  P+R
Sbjct: 322 LNASYKDGGLMYGWPVR 338


>gi|124026134|ref|YP_001015250.1| extracellular solute-binding protein [Prochlorococcus marinus str.
           NATL1A]
 gi|123961202|gb|ABM75985.1| extracellular solute-binding protein, family 3 [Prochlorococcus
           marinus str. NATL1A]
          Length = 353

 Score =  307 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 141/354 (39%), Positives = 213/354 (60%), Gaps = 15/354 (4%)

Query: 1   MYKDF-------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K          V +  L     T+   N+S L  IK R  L CG++  + GF+ +K++
Sbjct: 1   MIKKIMRRLVSVIVGLAALSAGCATTNQDNSSRLNLIKNRNELICGVSGKIPGFSFLKSD 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G ++G DVD C+A ++AI  D  KIQY PL A ERF A+++ +ID+LSRNT +TL R+ S
Sbjct: 61  GTYQGLDVDICKAFAAAIIGDSEKIQYRPLTAAERFTAIKTGEIDLLSRNTTFTLSRDSS 120

Query: 114 --LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
              GL F P+ + DGQG ++ K+  IS +  L+  SICV +GTTTE  + D F++ ++ Y
Sbjct: 121 GGNGLTFAPVVFHDGQGLMVKKESKISGLKDLANKSICVGSGTTTEQNINDAFESASLPY 180

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
            PI ++ + ++ A Y   RC A T D S L A +     P EH+IL D++SK PLAPA  
Sbjct: 181 TPIKYQDLNQVVAGYLQGRCSAMTSDRSQLAAARSGFKNPKEHIILEDVLSKEPLAPASD 240

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQ----VSKDTTNPDVQRFLGIDKSSNIGE 287
             D +  + + W  +++++AEE GIT+ NI++       +     ++RFLGID    +GE
Sbjct: 241 GQDQKLADAMRWVVFSLISAEEQGITKSNIDKKVQIAKNNPQLKPLRRFLGID--GGLGE 298

Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
            +GL+ D+  ++I   GNYGE+++R+LG  SE+ IPRG N L+ KGG+  +PP 
Sbjct: 299 KIGLSNDFVVKVISSTGNYGEIYERHLGQNSEVPIPRGQNELYKKGGVHISPPF 352


>gi|124022922|ref|YP_001017229.1| amino acid ABC transporter substrate-binding protein
           [Prochlorococcus marinus str. MIT 9303]
 gi|123963208|gb|ABM77964.1| ABC transporter for amino acids, substrate binding protein
           [Prochlorococcus marinus str. MIT 9303]
          Length = 349

 Score =  307 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 137/350 (39%), Positives = 206/350 (58%), Gaps = 11/350 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M + F   ++ L +L     S      S L  I KRG L CG++  + GF+ +  NG ++
Sbjct: 1   MIRRFATGLVTLSLLATGCASIDQGGGSRLELISKRGQLHCGVSGKIPGFSFLLGNGRYE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI--SLG 115
           G DVD CRA+++A+  D +K+QY PL A ERF AL++ +ID+LSRNT   L R+     G
Sbjct: 61  GLDVDICRAMAAAVVGDATKVQYRPLTAPERFTALKTGEIDLLSRNTTLNLSRDAAGGNG 120

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           L F P+ + DGQG ++ +  GI  +  L  ++ICV +GTTTE  L D F+   + Y PI 
Sbjct: 121 LTFAPVVFHDGQGLMVKRSTGIKGLQDLKASNICVGSGTTTEQNLNDAFQERKLSYTPIK 180

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++ + ++ A Y   RC A T D S L A +     P +H+IL  ++SK PLAPA + GD 
Sbjct: 181 YQDLNQVVAGYLQGRCLAMTSDRSQLAAARSGFPDPEQHIILDVVLSKEPLAPASVGGDQ 240

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSK----DTTNPDVQRFLGIDKSSNIGEALGL 291
              + + W  +A+  AEE GITQ+N++   +    +     ++RFLG+D    +G+ LGL
Sbjct: 241 RLGDAIRWVVFALFAAEEFGITQENVDSKLQQAKTNPQMSSLRRFLGVDA--GLGQKLGL 298

Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
             D+  ++IR  GNYGE+++R+LG  S + IPRG N  + +GGL+ APP 
Sbjct: 299 ADDFVVKVIRATGNYGEIYNRHLGPNSSVPIPRGLNRSYRQGGLLIAPPF 348


>gi|83858265|ref|ZP_00951787.1| ABC glutamate/glutamine/aspartate/asparagine transporter,
           periplasmic substrate-binding protein [Oceanicaulis
           alexandrii HTCC2633]
 gi|83853088|gb|EAP90940.1| ABC glutamate/glutamine/aspartate/asparagine transporter,
           periplasmic substrate-binding protein [Oceanicaulis
           alexandrii HTCC2633]
          Length = 353

 Score =  307 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 132/343 (38%), Positives = 206/343 (60%), Gaps = 5/343 (1%)

Query: 3   KDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           +          + F  S S   S+   + ++++RG L+CG++TGLVGFA+    G W GF
Sbjct: 13  RRLAKGAAAFALGFTVSHSDLDSVTSHMDEVQRRGVLRCGVDTGLVGFAQTDETGSWSGF 72

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           +V+ CRA ++A  +DP + +++P    +RF A++  ++DIL RNT WTL R    G+ F 
Sbjct: 73  EVELCRAYAAAFLNDPDRAEFIPTTTLDRFRAVREGEVDILLRNTSWTLSRATLQGVRFA 132

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            I Y+DGQGF+     G++S  +LSGA ICVQ  TT+ L L DY + + + +  +  E V
Sbjct: 133 GIYYYDGQGFLTPADLGLTSAQELSGARICVQPETTSALNLDDYAERYGLDFTIVSVETV 192

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +   AY A +CDA+T D+S L   + +   P  H++LPD+ISK PL+P +   D  +  
Sbjct: 193 ADARTAYEAGQCDAFTSDVSRLAGFRRSLSEPDRHMVLPDVISKEPLSPVVRDDDDAFAM 252

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
            V W   +++ AEE G+TQ       + ++ P+V+R L +D+   +  +LGL  D+  + 
Sbjct: 253 AVEWVLTSLIAAEEYGVTQSQAASADQTSSRPEVRRLLEVDE--EVAASLGLENDFARQA 310

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I   G+YGE+F+RNLG  S+L++ RG NA W +GGL+YAPP+R
Sbjct: 311 IAVGGHYGELFERNLGEASQLQLERGLNAQWKEGGLLYAPPVR 353


>gi|149925439|ref|ZP_01913703.1| probable amino acid-binding protein [Limnobacter sp. MED105]
 gi|149825556|gb|EDM84764.1| probable amino acid-binding protein [Limnobacter sp. MED105]
          Length = 343

 Score =  307 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 153/336 (45%), Positives = 228/336 (67%), Gaps = 4/336 (1%)

Query: 8   SILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRAL 67
            +  L  L   + +    +L  I KR  ++CG+++G+ GF+ + ++G W+G DV  CRA+
Sbjct: 11  LLGTLFCLLVANTAQAGPVLDAIYKRDAVRCGVSSGVAGFSALGSDGQWRGLDVAVCRAV 70

Query: 68  SSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQ 127
           ++A+  D  K+Q+ PL++++RF ALQ+ QIDILSRNT WTL R+  L   F  ITY+DGQ
Sbjct: 71  AAAVLGDAQKVQFTPLSSQQRFAALQAGQIDILSRNTTWTLGRDAGLNAHFAAITYYDGQ 130

Query: 128 GFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           G +MHK+ G+ S  +L GA ICVQ+GTT E  L+ Y  +  +    IV++  E    A+ 
Sbjct: 131 GILMHKRFGVKSAKELKGAEICVQSGTTNEKNLSTYLGSQGITAKAIVYDNFEAAYKAFF 190

Query: 188 AHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
           + RC A++ D+SAL  LK   + RP ++V+LP++ SK PL PA+++GD E++ IV W  +
Sbjct: 191 SGRCQAFSTDVSALIGLKSSQSGRPDDYVVLPEVFSKEPLGPAVLRGDDEFFAIVKWVVF 250

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306
           AM+ AEELG+ + NI Q   +++NP VQR LG   + N+G+ LGL +DW  +I++ +GNY
Sbjct: 251 AMIEAEELGVGKGNIEQAL-NSSNPAVQRLLG--GAENLGKPLGLPRDWVVKILQQVGNY 307

Query: 307 GEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GE+F+ NLG QS LK+ RG NALW++GGLMYAPP+R
Sbjct: 308 GEVFEENLGKQSPLKLERGLNALWTQGGLMYAPPLR 343


>gi|317404416|gb|EFV84833.1| extracellular solute-binding protein [Achromobacter xylosoxidans
           C54]
          Length = 338

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 143/340 (42%), Positives = 230/340 (67%), Gaps = 3/340 (0%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           K   ++ +   +   ++ +   +   ++KK+GF++CG++TG+ GF+   + G++KG DVD
Sbjct: 2   KVLKLAAIGTALFAASAAANAGATFDNVKKKGFVQCGVSTGIPGFSIADSKGEYKGLDVD 61

Query: 63  FCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT 122
            CRA+++ +F D SK +  PLN ++RF ALQS ++D+L+RNT  TL R+ +LGL    + 
Sbjct: 62  LCRAVAATMFGDASKFKVTPLNTQQRFTALQSGEVDVLTRNTTVTLTRDTTLGLIGVGVN 121

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+D QG ++ K   + S  +L+GA+ICVQ GTTTEL LAD+F+   +++ P+V ++ +EI
Sbjct: 122 YYDSQGVMVSKDLNVKSAKELNGATICVQPGTTTELNLADWFRGQKIEFKPVVIDKYDEI 181

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             A+ A RCDA+T D S L + + T + P +++ILP+  SK PL P + QGD +W+N++ 
Sbjct: 182 IRAFSAGRCDAFTTDKSQLASTRTTLENPDKYIILPEDFSKEPLGPMVRQGDEQWFNVIR 241

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           W+  AM+ AEE GIT KN+++++K +TNP++QR LG+  +  +G+ LG+   W Y II+ 
Sbjct: 242 WSLNAMLEAEEYGITSKNVDEMTK-STNPNIQRILGV--TPGMGKNLGVDDKWAYNIIKQ 298

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGE F+  LG  S +K+ RG NA + +GGLMY  P+R
Sbjct: 299 VGNYGESFEATLGKSSAMKLERGLNASYKQGGLMYGWPVR 338


>gi|148239754|ref|YP_001225141.1| ABC transporter, substrate binding protein for amino acids
           [Synechococcus sp. WH 7803]
 gi|147848293|emb|CAK23844.1| ABC transporter, substrate binding protein for amino acids
           [Synechococcus sp. WH 7803]
          Length = 338

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 132/340 (38%), Positives = 205/340 (60%), Gaps = 8/340 (2%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +L  +    T     AS L  +++RG L+CG++  + GF+ +   G + G DVD C+A +
Sbjct: 1   MLVGLQACATLGEGGASRLDLVRQRGELRCGVSGKIPGFSFLDREGRYAGLDVDMCKAFA 60

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLAFRPITYFDG 126
           +A   D +K++Y PL A ERF AL++ +ID+LSRNT + L R+ S   G+AF P+ + DG
Sbjct: 61  AAFVGDANKVEYRPLTAPERFTALRTGEIDLLSRNTTFNLSRDASGGNGVAFAPVVFHDG 120

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
           QG ++ +  GI  +  L   +ICV +GTTTE  L D F+A  + Y P+ ++ + ++ A Y
Sbjct: 121 QGLLVRRDSGIKRLEDLRNQTICVGSGTTTEQNLNDVFQAKGIPYKPVKYQDLNQLVAGY 180

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              RC A T D S L + +   ++P  H ILP+++SK PLAP    GD    + + W  Y
Sbjct: 181 LQKRCAAMTSDRSQLASARSGFEQPGNHQILPEVLSKEPLAPLSSGGDQRLADAMRWVVY 240

Query: 247 AMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           A+VTAEE+GITQ N++    +   D +   ++RFLG++    +G  LGL  D+   +++ 
Sbjct: 241 ALVTAEEMGITQNNVDAKLQEAINDPSKTALRRFLGVE--GELGSKLGLPNDFVVSVLKA 298

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            GNYGE+++R+LG QS + IPRG N L   GG++ APP +
Sbjct: 299 TGNYGEIYNRHLGPQSAVPIPRGLNQLHRDGGVLIAPPFQ 338


>gi|300022607|ref|YP_003755218.1| extracellular solute-binding protein family 3 [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299524428|gb|ADJ22897.1| extracellular solute-binding protein family 3 [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 344

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 143/338 (42%), Positives = 213/338 (63%), Gaps = 3/338 (0%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
             ++I  ++  F     + AS++  I+KRG + CG++    GF+E+  +G WKGFDV+FC
Sbjct: 10  LILAIGSMVGGFCGPAWSEASLIDTIRKRGHVVCGVSERAPGFSEISGSGTWKGFDVEFC 69

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
            AL++A+  +   +++L L   ++F AL+  +ID+L   T WTL R+  LG  F    Y+
Sbjct: 70  SALAAAVLGNKDSVKFLSLMPSDKFNALRDNEIDVLMGATSWTLTRDTELGARFVAALYY 129

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           DGQGFI+ +   ISSV +LSGASICV  G+T    +ADYF A  M+Y  I  +R +E+  
Sbjct: 130 DGQGFIVPRNHSISSVLELSGASICVLPGSTDASAVADYFGARRMRYQLITSDRWDELVK 189

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
            Y +  C   TGD+S L   +      ++ ++LP+ ISK PL PA+  G   W+ +V WT
Sbjct: 190 TYSSGGCTVLTGDLSLLAYERSRLANGADQMLLPEYISKEPLGPAVKVGRDSWFAVVRWT 249

Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304
           + A+V AEELGI   N+ ++ K + + DV+RFLG++   +IG  LGL +DW Y+++R +G
Sbjct: 250 YMALVAAEELGINSSNV-EMMKVSPSHDVRRFLGLEA--DIGAPLGLARDWAYQVVRQVG 306

Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           NY E+FDR LG  S LK+ RG N LW+KGGLMY+ P+R
Sbjct: 307 NYAEIFDRTLGQGSALKLDRGLNNLWTKGGLMYSVPMR 344


>gi|78184422|ref|YP_376857.1| extracellular solute-binding protein [Synechococcus sp. CC9902]
 gi|78168716|gb|ABB25813.1| extracellular solute-binding protein, family 3 [Synechococcus sp.
           CC9902]
          Length = 367

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 140/348 (40%), Positives = 206/348 (59%), Gaps = 11/348 (3%)

Query: 3   KDFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           +    ++  L+ L     + +      L  ++ RG L CG++  + GF+ +   G + GF
Sbjct: 21  RRLIGAVGGLVGLISGCATLSDGTSSRLDLVQSRGELLCGVSGKIPGFSFLSPEGRYAGF 80

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLA 117
           DVD C+A+++A   D +K+QY PL A ERF AL+S +ID+LSRNT  TL R+ +   GL+
Sbjct: 81  DVDICKAMAAAFVGDSAKVQYRPLTAPERFTALRSGEIDLLSRNTTHTLSRDAAGGNGLS 140

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F P  + DGQG ++    G+ S++ LSG +ICV +GTTTE  L D F A  + Y PI ++
Sbjct: 141 FAPTVFHDGQGLMVSVGSGVRSIADLSGKAICVGSGTTTEQNLNDAFAAQGLPYTPIKYQ 200

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
            + ++   Y   RC A T D S L + +     P +HVIL D +SK PLAPA++ GD   
Sbjct: 201 DLNQVVGGYLQGRCAAMTSDRSQLASARSGFKDPQQHVILEDRLSKEPLAPAVVGGDQRM 260

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVS----KDTTNPDVQRFLGIDKSSNIGEALGLTK 293
            +  +W  YA++ AEE GITQ N++ V      D +   ++RFLG+D    +G  LGL  
Sbjct: 261 ADATNWVVYALIEAEERGITQANLDDVLERAVADPSQAALRRFLGVD--GGLGAKLGLPD 318

Query: 294 DWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
           D+  ++IR  GNYGE+++R+LG  S + IPRG N L  +GGLM APP 
Sbjct: 319 DFVVQVIRATGNYGEIYNRHLGPGSAVTIPRGPNRLGVEGGLMIAPPF 366


>gi|302383029|ref|YP_003818852.1| extracellular solute-binding protein family 3 [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302193657|gb|ADL01229.1| extracellular solute-binding protein family 3 [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 370

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 144/321 (44%), Positives = 212/321 (66%), Gaps = 4/321 (1%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           +  L  IK+RG L CG+N GLVGFA     G+W+GFDVDFCR L++A+  DP  ++++PL
Sbjct: 52  SPTLVAIKRRGRLNCGVNQGLVGFAYTDNRGEWRGFDVDFCRGLAAAVVGDPDAVRFVPL 111

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           +A+ RF AL+  ++D+L RNT WT+ R+    L+F  I Y+DGQGF++ +   ++S ++L
Sbjct: 112 SAENRFQALEDGRVDVLWRNTSWTMERDTGGRLSFAGINYYDGQGFLVRRALNLNSAAEL 171

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           +GA IC+Q+G+T+ L + DYF++  ++Y  +V    E    AY    CDA++ D+SAL A
Sbjct: 172 NGARICLQSGSTSALNVEDYFRSRGIEYRAVVLPTEEAARQAYGREDCDAFSADVSALAA 231

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
            + T    S+HVILPD+ISK PL P + +GD +W  IV WT  A+V AEELG+TQ N+  
Sbjct: 232 ARTTLGDSSQHVILPDVISKEPLGPVVRRGDEQWTAIVRWTQNALVLAEELGVTQANVED 291

Query: 264 VSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIP 323
            + +  +P V+R LG++     G  +GL+ DW    I  +GNYGE+F+RNLG+QS L + 
Sbjct: 292 QAAEARDPQVRRLLGVE--GEFGSRMGLSDDWARDAIAGVGNYGEIFERNLGSQSALDLA 349

Query: 324 RGYNALWS--KGGLMYAPPIR 342
           RG NA W+    GL+Y  P+R
Sbjct: 350 RGLNAQWNGRPAGLIYGLPVR 370


>gi|56697221|ref|YP_167586.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Ruegeria pomeroyi DSS-3]
 gi|56678958|gb|AAV95624.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Ruegeria pomeroyi DSS-3]
          Length = 337

 Score =  306 bits (783), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 138/318 (43%), Positives = 206/318 (64%), Gaps = 4/318 (1%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             L D++  G L CG++ G+ GF+   + G W G D D CRA+++A   D + ++++PL 
Sbjct: 24  GKLDDVRAAGELACGVSEGVPGFSNPNSEGVWTGLDADICRAVAAATLGDANAVRFVPLA 83

Query: 85  AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
           +K++ LA+ S Q+D+ SR T WT+ R+ + G+ F  + Y+DGQGF++    G++S  +L 
Sbjct: 84  SKQKVLAVSSGQVDMTSRTTTWTMKRDSAEGVDFTSVVYYDGQGFMVRADAGVTSARELD 143

Query: 145 GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            A++C+  GTTTEL +AD+ +A+ +   P+VFE   E   AY + RCDA T D S L A 
Sbjct: 144 AATVCLTTGTTTELNMADFARANGLTLEPVVFEGKREAVEAYASGRCDALTTDASQLAAF 203

Query: 205 KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
           +     PSEH ILP+IISK PLAP +  GD +W +IV+W  Y ++TAEELG+TQ N+ ++
Sbjct: 204 RAGFADPSEHKILPEIISKEPLAPFVAHGDNQWKDIVTWVVYGLITAEELGVTQANVAEM 263

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
           +  +TNP++QR LG   S + G  LGL   W    I  +GNYGE++DRNL   + L + R
Sbjct: 264 TASSTNPNIQRLLGT--SGDTGGFLGLNSTWMVDTISAVGNYGEIYDRNL--TATLGLER 319

Query: 325 GYNALWSKGGLMYAPPIR 342
           G NALW+ GG++YA P+R
Sbjct: 320 GVNALWTDGGILYAMPVR 337


>gi|88808790|ref|ZP_01124300.1| ABC transporter for amino acids, substrate binding protein
           [Synechococcus sp. WH 7805]
 gi|88787778|gb|EAR18935.1| ABC transporter for amino acids, substrate binding protein
           [Synechococcus sp. WH 7805]
          Length = 338

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 133/340 (39%), Positives = 207/340 (60%), Gaps = 8/340 (2%)

Query: 9   ILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALS 68
           +L  +    T     AS L  I++RG L+CG++  + GF+ ++ +G + G DVD C+A +
Sbjct: 1   MLFGLYACATLGEGGASRLDLIRQRGELRCGVSGKIPGFSFLERDGRYAGLDVDMCQAFA 60

Query: 69  SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLAFRPITYFDG 126
           +A   D SK++Y PL A ERF AL++ +ID+LSRNT + L R+ S   G+ F P+ + DG
Sbjct: 61  AAFVGDSSKVEYRPLTAPERFTALRTGEIDLLSRNTTFNLSRDASGGNGVTFAPVVFHDG 120

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
           QG ++ +  GI  +  L   +ICV +GTTTE  L D F+A  + Y P+ ++ + ++ A Y
Sbjct: 121 QGLLVRRNSGIKGLDDLRDKTICVGSGTTTEQNLNDVFQARGIAYKPVKYQDLNQLVAGY 180

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
              RC A T D S L + +    +P+ H ILP+++SK PLAP    GD    + + W  Y
Sbjct: 181 LQGRCSAMTSDRSQLASARSGFAQPNNHQILPEVLSKEPLAPLSSGGDQRLADAMRWVVY 240

Query: 247 AMVTAEELGITQKNIN----QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           A++TAEE+GIT+ N++    + + D +   ++RFLG+D    +G  LGL  D+   +++ 
Sbjct: 241 ALITAEEMGITKANVDVKLQEATSDPSKTALRRFLGVD--GELGSKLGLRNDFVVSVLKT 298

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            GNYGE++DR+LG QS + IPRG N L   GG++ APP +
Sbjct: 299 TGNYGEIYDRHLGPQSAVPIPRGLNQLHRDGGVLIAPPFQ 338


>gi|296536584|ref|ZP_06898665.1| ABC superfamily ATP binding cassette transporter, amino acid
           binding protein [Roseomonas cervicalis ATCC 49957]
 gi|296263094|gb|EFH09638.1| ABC superfamily ATP binding cassette transporter, amino acid
           binding protein [Roseomonas cervicalis ATCC 49957]
          Length = 323

 Score =  305 bits (781), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 154/326 (47%), Positives = 220/326 (67%), Gaps = 7/326 (2%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
            +    A  LG I+ RG + CG+    +GFA   + G ++G D D+CRAL+ A+F D  K
Sbjct: 4   ATAQPAADTLGAIRARGHVLCGVTPNTIGFAAPDSQGVFRGLDADYCRALAVAVFGDADK 63

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
            +++P  A +RF ALQS ++D+L R T WTL RE +LG  F  + ++DG GF++ +  G+
Sbjct: 64  ARFVPTTAPQRFPALQSGEVDVLIRTTTWTLSREAALGFVFAGVNFYDGNGFMVRRALGV 123

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            S  QL GAS+C+Q G+TTEL + DYF+AH M+ +P+ +E VEEI  A+ A RCD Y+ D
Sbjct: 124 QSARQLDGASVCLQQGSTTELNVTDYFRAHGMRLNPVTYENVEEIRTAFAAGRCDVYSSD 183

Query: 198 ISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
            S L A +        + V+LP+IISK PL PA+ +GD  W++IV WTH+A++TAEELGI
Sbjct: 184 TSTLAAFRAGQGAAADQFVLLPEIISKEPLGPAVRKGDARWFDIVRWTHFALLTAEELGI 243

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
           TQ N+ +   D+T+PDVQRFLG  +S ++G  LGL  DW  RI+  +GN+GEM++RN+  
Sbjct: 244 TQANLARF-ADSTSPDVQRFLG--RSGDLGRMLGLQPDWAARIVGQLGNFGEMWERNI-- 298

Query: 317 QSELKIPRGYNALWSKGGLMYAPPIR 342
            + + I RG NALW++GGL YAPP+R
Sbjct: 299 -TPMGIQRGINALWTQGGLQYAPPMR 323


>gi|119510485|ref|ZP_01629618.1| extracellular solute-binding protein, family 3 [Nodularia spumigena
           CCY9414]
 gi|119464907|gb|EAW45811.1| extracellular solute-binding protein, family 3 [Nodularia spumigena
           CCY9414]
          Length = 358

 Score =  305 bits (780), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 151/358 (42%), Positives = 226/358 (63%), Gaps = 19/358 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI----------------LGDIKKRGFLKCGINTGL 44
           M +   +  +  +I   T+ +                        IK RG L CG++  +
Sbjct: 4   MRRSALILAIAPLIFAITACNNPGETTNTNNPNPGTQTTRNRWDAIKSRGQLICGVSGQI 63

Query: 45  VGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNT 104
            GF+ V+ +G + G DVD CRA+++A+FD+P  +++  L+A+ERF ALQ+ +ID+LSRNT
Sbjct: 64  PGFSFVETDGKYSGIDVDICRAIAAALFDNPDAVEFRNLSAQERFTALQTGEIDVLSRNT 123

Query: 105 DWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYF 164
            WTL R  ++GL F P+ ++DGQ  ++ K +GI+S++ +   +ICVQ+GTTTE  LAD  
Sbjct: 124 SWTLSRATAMGLEFAPVVFYDGQAIMVGKNRGINSLADMKDKAICVQSGTTTEQNLADQM 183

Query: 165 KAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS 224
           +  N+ Y PIVFE V    A Y   RCD  T D SAL + ++T   P  +VIL ++IS  
Sbjct: 184 RKRNITYKPIVFEDVNVTFATYAEGRCDGITADRSALVSRRITLPNPENNVILDEVISSE 243

Query: 225 PLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSN 284
           PLAPA+ +GD+   + V+W  Y+++ AEELGI  +N+ Q    + +PD++RFLG +   N
Sbjct: 244 PLAPAVAKGDSVLGSAVTWVVYSLIKAEELGINSQNLGQF-ATSNDPDIKRFLGTE--GN 300

Query: 285 IGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GE LGLT D+  RI++H+GNYGE++DRNLG ++ L +PRG N L  +GGL+YAPP R
Sbjct: 301 LGEGLGLTNDFAARIVKHVGNYGEIYDRNLGPKTNLNLPRGQNQLGQQGGLLYAPPFR 358


>gi|33240126|ref|NP_875068.1| amino acid ABC transporter periplasmic protein [Prochlorococcus
           marinus subsp. marinus str. CCMP1375]
 gi|33237653|gb|AAP99720.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Prochlorococcus marinus
           subsp. marinus str. CCMP1375]
          Length = 350

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 140/351 (39%), Positives = 217/351 (61%), Gaps = 12/351 (3%)

Query: 1   MY-KDFFVSILCLIILFFTSFST---NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M  K FF  ++ L IL     ST   NAS L  IKKR  L CG++  + GF+ ++ +G +
Sbjct: 1   MKIKRFFSGMMTLSILLTGCASTGERNASRLQLIKKRNSLICGVSGKIPGFSFLETDGTY 60

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--L 114
           +G D+D C+A ++A   D  ++QY PL A ERF A+++ +ID+LSRNT + L R+     
Sbjct: 61  QGLDIDICKAFAAAFIGDSKRVQYRPLTAAERFTAVRTGEIDLLSRNTTFNLSRDSIGGN 120

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           GL F P+ + DGQG ++ +   I+++  L+  SICV +GTTTE  + D F+A ++ Y PI
Sbjct: 121 GLTFAPVIFHDGQGLMVKRNSRINTIESLANKSICVGSGTTTEQNINDAFEAISLPYTPI 180

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            ++ + ++ A Y   RC A T D S L A +    +P +H+IL DI+SK PLAPA   GD
Sbjct: 181 KYQDLNQVVAGYLQGRCSAMTSDRSQLAAARSGFPKPEDHIILNDILSKEPLAPASSGGD 240

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN----PDVQRFLGIDKSSNIGEALG 290
            +  + + W  +++++AEE GIT+ NI +  +   N      ++RFLG++   ++GE +G
Sbjct: 241 QKLSDAMRWVIFSLISAEEQGITKGNIKEKLQIAQNNPQMKSLRRFLGVE--GDLGEKIG 298

Query: 291 LTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
           L  D+  ++I   GNYGE+++R+LG  SE+ IPRG N L++KGG+  APP 
Sbjct: 299 LANDFVVKVISSTGNYGEIYNRHLGINSEVPIPRGLNKLYNKGGVQIAPPF 349


>gi|33863169|ref|NP_894729.1| ABC transporter for amino acids, substrate binding protein
           [Prochlorococcus marinus str. MIT 9313]
 gi|33635086|emb|CAE21072.1| ABC transporter for amino acids, substrate binding protein
           [Prochlorococcus marinus str. MIT 9313]
          Length = 349

 Score =  303 bits (776), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 136/350 (38%), Positives = 204/350 (58%), Gaps = 11/350 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +     ++ L +L     S      S L  I KRG L CG++  + GF+ +  NG ++
Sbjct: 1   MMRRLTTGLVTLSLLATGCASIDQGGGSRLELISKRGQLNCGVSGKIPGFSFLLGNGRYE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI--SLG 115
           G DVD CRA+++A   D +K+QY PL A ERF AL++ +ID+LSRNT   L R+     G
Sbjct: 61  GLDVDICRAMAAAFIGDATKVQYRPLTAPERFTALKTGEIDLLSRNTTLNLSRDAAGGNG 120

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           L F P+ + DGQG ++ +  GI  +  L  ++ICV +GTTTE  L D F+   + Y PI 
Sbjct: 121 LTFAPVVFHDGQGLMVKRSSGIKGLQDLKASNICVGSGTTTEQNLNDAFQERKLSYTPIK 180

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++ + ++ A Y   RC A T D S L A +     P +H+IL  ++SK PLAPA + GD 
Sbjct: 181 YQDLNQVVAGYLQGRCLAMTSDRSQLAAARSGFPDPEQHIILDVVLSKEPLAPASVGGDQ 240

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSK----DTTNPDVQRFLGIDKSSNIGEALGL 291
              + + W  +A+  AEE GITQ+N++   +    +     ++RFLG+D    +G+ LGL
Sbjct: 241 RLGDAIRWVVFALFAAEEFGITQENVDSKLEQAQTNPQMSSLRRFLGVDA--GLGQKLGL 298

Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
             D+  ++IR  GNYGE+++R+LG  S + IPRG N  + +GGL+ APP 
Sbjct: 299 VDDFVVKVIRATGNYGEIYNRHLGPNSSVPIPRGRNRSYRQGGLLIAPPF 348


>gi|254417720|ref|ZP_05031444.1| hypothetical protein BBAL3_30 [Brevundimonas sp. BAL3]
 gi|196183897|gb|EDX78873.1| hypothetical protein BBAL3_30 [Brevundimonas sp. BAL3]
          Length = 356

 Score =  302 bits (774), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 139/322 (43%), Positives = 203/322 (63%), Gaps = 4/322 (1%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           ++  L  +K+RG L CG++ GLVGFA     G W+GFD DFCRA+++AIF D + ++++P
Sbjct: 37  DSPTLIAVKRRGRLNCGVHQGLVGFAYTDNRGQWRGFDADFCRAMAAAIFGDGNAVRFVP 96

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           L+A +RF AL+  ++D+L RN+ WT+ R+   G  F  I Y+DGQGF++ +   ++S ++
Sbjct: 97  LSASDRFAALKEGRVDVLWRNSSWTMSRDAGEGFVFAGINYYDGQGFLVRRSLSLASATE 156

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           L+GA ICVQAG+T +    D+F++  + Y P+V    E    AY    CDA + DISAL 
Sbjct: 157 LNGARICVQAGSTAQANADDFFRSRGIAYRPVVLPSEEAARDAYGREDCDALSADISALA 216

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           A +        H IL D++SK PL P +  GD  W ++V WT  A+V AEE G+TQ+N  
Sbjct: 217 AARTVLADSQAHTILSDVVSKEPLGPVVRAGDERWADVVRWTLNAVVLAEEFGVTQENAE 276

Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322
            +SK + +P ++R LG +     G  LGL+ DW    I  +GNYG++FDRNLG+QS L +
Sbjct: 277 ALSKTSNDPRIKRLLGSE--GEYGALLGLSDDWAKDAILSVGNYGQIFDRNLGSQSPLDL 334

Query: 323 PRGYNALWSK--GGLMYAPPIR 342
            RG NA W+    GL+Y  PIR
Sbjct: 335 ARGLNAQWNARPAGLIYGLPIR 356


>gi|237807991|ref|YP_002892431.1| extracellular solute-binding protein family 3 [Tolumonas auensis
           DSM 9187]
 gi|237500252|gb|ACQ92845.1| extracellular solute-binding protein family 3 [Tolumonas auensis
           DSM 9187]
          Length = 342

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 159/345 (46%), Positives = 234/345 (67%), Gaps = 6/345 (1%)

Query: 1   MYK-DFFVSILCLIILFFT--SFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K  +   +   + L     + + +   L ++KK+G+++CG+N GL GF+   A G W+
Sbjct: 1   MSKLKYLTGVASAVALLVAGNAQAASGDTLANVKKKGYVQCGVNDGLPGFSSPNAKGAWE 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G DVD CRA+++A+F D SK++Y+PL  KERF ALQS ++DILSRNT WT+ R+ +LGL 
Sbjct: 61  GMDVDVCRAVAAAVFADASKVKYIPLGGKERFTALQSGEVDILSRNTTWTMTRDATLGLK 120

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
               TY+DGQGF+++K  G+ S  +L GA+IC + GTTTE+ +ADYF A+ MKY P+VF+
Sbjct: 121 STATTYYDGQGFMVNKSLGVKSAKELDGATICTEGGTTTEMNMADYFNANKMKYTPVVFD 180

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
             ++    + + RCD  T D S L+A+++   +P +  +LP+IISK PL P + QGD  W
Sbjct: 181 NSDQTVKGFESGRCDVLTSDKSQLFAVRVKLAKPDDVAVLPEIISKEPLGPMVRQGDESW 240

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
             +V WT +AM+ AEELG++ KN+++++K + +PDV+R LG D     G  LG  KDW Y
Sbjct: 241 ELLVKWTVFAMINAEELGVSSKNVDEMAK-SGSPDVKRMLGYDAPD--GTTLGAVKDWGY 297

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +I++ +GNY E+FDRN+G  S LKI R  N LW+KGG +YAPP+R
Sbjct: 298 QIVKQVGNYAEVFDRNVGKDSPLKIVRTENNLWNKGGFLYAPPVR 342


>gi|116070918|ref|ZP_01468187.1| extracellular solute-binding protein, family 3 [Synechococcus sp.
           BL107]
 gi|116066323|gb|EAU72080.1| extracellular solute-binding protein, family 3 [Synechococcus sp.
           BL107]
          Length = 371

 Score =  302 bits (773), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 141/354 (39%), Positives = 205/354 (57%), Gaps = 15/354 (4%)

Query: 1   MYK----DFFVSILCLIILFFTSFSTNASI---LGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M++        ++  LI L     +        L  ++ RG L CG++  + GF+ +  +
Sbjct: 19  MFRPISSRLIGAVGGLIGLLCGCATLGDGTDSRLNLVQTRGELLCGVSGKIPGFSFLSPD 78

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G + G DVD C+A+++A   D +K+QY PL A ERF AL+S +ID+LSRNT  TL R+ +
Sbjct: 79  GRYAGLDVDVCKAMAAAFVGDSTKVQYRPLTAPERFTALRSGEIDLLSRNTTHTLSRDAA 138

Query: 114 --LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY 171
              GL+F P  + DGQG ++    G  S++ LSG +ICV +GTTTE  L D F A  + Y
Sbjct: 139 GGNGLSFAPTVFHDGQGLMVSVGSGARSMADLSGKAICVGSGTTTEQNLNDAFAAQGLPY 198

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAII 231
            PI ++ + ++   Y   RC A T D S L + +     P +HVIL D +SK PLAPA++
Sbjct: 199 TPIKYQDLNQVVGGYLQGRCAAMTSDRSQLASARSGFKDPQQHVILEDRLSKEPLAPAVV 258

Query: 232 QGDTEWYNIVSWTHYAMVTAEELGITQKNINQVS----KDTTNPDVQRFLGIDKSSNIGE 287
            GD    +  +W  YA++ AEE GITQ N++ V      D +   ++RFLG+D    +G 
Sbjct: 259 GGDQRMADATNWVVYALIEAEERGITQANLDDVLERAVADPSQAALRRFLGVD--GGLGA 316

Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
            LGL  D+  ++IR  GNYGE+++R+LG  S + IPRG N L   GGLM APP 
Sbjct: 317 KLGLPDDFVVQVIRATGNYGEIYNRHLGPGSAVTIPRGPNRLGRDGGLMIAPPF 370


>gi|163793102|ref|ZP_02187078.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [alpha proteobacterium
           BAL199]
 gi|159181748|gb|EDP66260.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [alpha proteobacterium
           BAL199]
          Length = 346

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 137/325 (42%), Positives = 200/325 (61%), Gaps = 4/325 (1%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            S   S L  +K RG L+C + T   G+  +   G W GFD + CRA+S+AIF DP KI+
Sbjct: 24  ASAQQSTLDIVKSRGHLRCQLGTPAPGWYMLSDTGKWSGFDYENCRAVSAAIFGDPDKIE 83

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
              + +  RF A+ + + D+LSR T WTL RE  LGL F  ++++DGQGF++ K  GI S
Sbjct: 84  VQSVTSAVRFTAMANGESDMLSRTTTWTLFRETQLGLDFTTVSFYDGQGFMVLKDAGIKS 143

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
             +L GA++CV  GTTTEL L DY + + +   P+VFE     D  +    CDA T D S
Sbjct: 144 ALELKGATVCVATGTTTELNLTDYSRTNGLDIKPVVFEDSNVRDNTFFTGGCDAITNDKS 203

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
           +L + +      S   ILP+ ISK PL P + Q D++W +IV W+ Y M+ AEE G++  
Sbjct: 204 SLASTRAKAPDVSIFKILPETISKEPLGPVVRQNDSQWKDIVQWSVYTMIAAEEYGMSST 263

Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319
           N+++V  +TTNP+++R LG +   ++ + LGL   W Y II+ +GNYGE ++  +G ++ 
Sbjct: 264 NVDKVLAETTNPEIKRMLGAE--GDLNKGLGLEPKWAYNIIKMVGNYGENYEEFMGEKTV 321

Query: 320 LKIPR--GYNALWSKGGLMYAPPIR 342
           + IPR    NALW+KGGL+Y+PP R
Sbjct: 322 MNIPRDGSPNALWTKGGLLYSPPFR 346


>gi|116072941|ref|ZP_01470203.1| ABC transporter for amino acids, substrate binding protein
           [Synechococcus sp. RS9916]
 gi|116068246|gb|EAU73998.1| ABC transporter for amino acids, substrate binding protein
           [Synechococcus sp. RS9916]
          Length = 349

 Score =  299 bits (766), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 138/351 (39%), Positives = 205/351 (58%), Gaps = 11/351 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFS---TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M+      +L  +++     +     AS LG I++R  L+CG++  + GF+ ++ NG + 
Sbjct: 1   MHFRTLSGLLAGVLMLQGCATLGEGGASRLGLIQQRKSLRCGVSGKIPGFSFLRPNGSYS 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LG 115
           G DVD C+A ++A   D + ++Y PL A ERF AL++ +ID+LSRNT + L R+ +   G
Sbjct: 61  GLDVDLCKAFAAAFVGDATAVEYRPLTAPERFTALRTGEIDLLSRNTTFNLSRDAAGGNG 120

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           ++F P+ + DGQG I+ K  GI  ++ L   SICV +GTTTE  L D  +A  + Y PI 
Sbjct: 121 VSFAPVVFHDGQGLIVKKTSGIRQLTDLRNQSICVGSGTTTEQNLNDALEAQGIAYTPIK 180

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           ++ + ++ A Y   RC A T D S L A +     P EHVIL  ++SK PLAP  + GD 
Sbjct: 181 YQDLNQVVAGYLQDRCSAMTSDRSQLAAARSGFANPQEHVILNAVLSKEPLAPLSVGGDQ 240

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN----PDVQRFLGIDKSSNIGEALGL 291
              + + W  YA++TAEELG+TQ N+ +      N      ++RFLG+D    +G  LGL
Sbjct: 241 RLGDAMRWVVYALITAEELGLTQANVQERLAKAQNNPQMTQLRRFLGVD--GELGTKLGL 298

Query: 292 TKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             D+  R+I   GNYGE+++R+LG  S + IPRG N L   GG M APP +
Sbjct: 299 APDFVVRVIEATGNYGEIYNRHLGPDSAVPIPRGLNQLHRDGGAMTAPPFQ 349


>gi|309791547|ref|ZP_07686046.1| extracellular solute-binding protein [Oscillochloris trichoides
           DG6]
 gi|308226407|gb|EFO80136.1| extracellular solute-binding protein [Oscillochloris trichoides
           DG6]
          Length = 404

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 131/338 (38%), Positives = 204/338 (60%), Gaps = 9/338 (2%)

Query: 11  CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSS 69
             ++   T    ++ +L  +K RG L CG N  L GF       G W GFDVDFCRAL++
Sbjct: 70  LTVVAEATPTPASSGLLERVKARGKLICGTNADLPGFGFYDNVRGRWSGFDVDFCRALAA 129

Query: 70  AIFDDPSKIQYLPLN---AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDG 126
           AIF D   ++++ LN     ERF +++S ++D+L RNT WTL R+    LAF P T+ DG
Sbjct: 130 AIFADADAVEFVALNTSGQNERFESVRSGKVDVLFRNTTWTLGRD-LSQLAFGPTTFHDG 188

Query: 127 QGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186
           Q F++     I+S++ L+G  ICV  GTT+   L+D F A  + +  ++++   ++  AY
Sbjct: 189 QTFMVRTASQITSLNDLAGKKICVSRGTTSAQNLSDDFAARGIVFEQVLYDDENQLYPAY 248

Query: 187 RAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHY 246
               CDA T D S L + + T +RP +H IL + IS+ PL PA I+ D +W ++V+W  +
Sbjct: 249 DQGACDAVTSDSSQLASKRQTLERPEDHTILGERISREPLGPAFIEHDEQWRDVVTWVVF 308

Query: 247 AMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNY 306
           A + AEEL + Q N+ Q+  ++T+P V+R LG++   + G +LGL  D+ Y+IIR +GNY
Sbjct: 309 ATMYAEELRVDQTNVEQMKANSTDPRVRRLLGLE--GDFGTSLGLNNDFGYQIIRLVGNY 366

Query: 307 GEMFDRNLGNQSELKIPRGYNALWS--KGGLMYAPPIR 342
            ++++RNLG  +   + RG N  W+   GG++ +PP R
Sbjct: 367 ADIYNRNLGPTTPFAMDRGPNKAWNLGAGGVLASPPFR 404


>gi|254469135|ref|ZP_05082540.1| glutamate/glutamine/aspartate/asparagine-binding protein
           [Pseudovibrio sp. JE062]
 gi|211960970|gb|EEA96165.1| glutamate/glutamine/aspartate/asparagine-binding protein
           [Pseudovibrio sp. JE062]
          Length = 678

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 133/318 (41%), Positives = 196/318 (61%), Gaps = 2/318 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K      L       +  + +A  L D+++RG L+C ++TGL GF+    NG W+GFD
Sbjct: 1   MKKMILPVALGAAFAATSLSAASAGTLEDVQERGKLRCAVSTGLAGFSYTDENGKWQGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD+CRA+++A+  D   +++ P   K RF AL S ++DILSRNT WT  R+  L   F  
Sbjct: 61  VDYCRAVAAAVLGDADAVEFSPTTGKTRFTALASGEVDILSRNTTWTFSRDADLKFTFLG 120

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           ++Y+DGQGF++ K  G++S  +L GA++C+Q GTTTEL L+DYF A  M Y P+  E   
Sbjct: 121 VSYYDGQGFMVKKSLGVASAKELDGATVCIQTGTTTELNLSDYFTAEGMSYEPLSIETNT 180

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E  A Y A  CD YT D S L A + T +   +H++LP+IISK PL P +  GD +W +I
Sbjct: 181 EGRANYLADACDVYTTDASGLAASRATFENADDHIVLPEIISKEPLGPLVRHGDDQWADI 240

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
             W   A+  AEE GIT  N ++++ ++ +P+V R LG   S  +G ++GL  D+    I
Sbjct: 241 GRWVLNALKIAEEKGITAANADEMAANSKDPEVLRLLGA--SGEMGASVGLGNDFALVAI 298

Query: 301 RHMGNYGEMFDRNLGNQS 318
           + +GNYGE+F+R+LG Q+
Sbjct: 299 KAVGNYGEVFERHLGTQT 316


>gi|317407537|gb|EFV87488.1| extracellular solute-binding protein, family 3 [Achromobacter
           xylosoxidans C54]
          Length = 329

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 123/331 (37%), Positives = 192/331 (58%), Gaps = 5/331 (1%)

Query: 12  LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAI 71
              +      TN+  +  I+ RG++ CG   G  GF+    +G+WKG DVD CRA++ A+
Sbjct: 2   ASPVAAAVTQTNSPTVDQIRARGYVICGSGHGTTGFSAPDKDGNWKGLDVDTCRAIAIAV 61

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
             D SK +++PL  ++R  ALQ+ QID+L R T WTL R+ + G+ F    Y++   F++
Sbjct: 62  LGDASKTRFVPLTGQQRLTALQTGQIDVLPRTTSWTLRRDAN-GINFTYPNYYEYDAFMV 120

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K  GI+    ++GA+ICVQ G+T E+T+AD  +   +    ++F+ V     A+ + RC
Sbjct: 121 RKDLGITQTKDMNGATICVQTGSTNEVTVADLSRKFKLGLKTVLFDNVAASRQAFFSGRC 180

Query: 192 DAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           D    D SAL A++      P ++VI P       L P++  GD  W++IV W     + 
Sbjct: 181 DGLITDASALAAVRATQAQNPDDYVIFPASGHSEALTPSVRHGDDRWFDIVKWVIQVPIA 240

Query: 251 AEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMF 310
           AE++GITQ N++ + K + +P + RFLG +     G+ALGL + W Y I++ +GNYGE+F
Sbjct: 241 AEDMGITQANVDDMLK-SDDPRIARFLGKEP--GNGKALGLDERWAYNIVKQLGNYGEIF 297

Query: 311 DRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
           +RN+G  S +K+ RG N L+  GGLMY    
Sbjct: 298 ERNVGKNSPMKLERGMNRLYRDGGLMYPYVF 328


>gi|150397299|ref|YP_001327766.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419]
 gi|150028814|gb|ABR60931.1| extracellular solute-binding protein family 3 [Sinorhizobium
           medicae WSM419]
          Length = 343

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 117/343 (34%), Positives = 194/343 (56%), Gaps = 7/343 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M     ++      L  T+   +AS+L  +K+RG L CG +    GF  +    G  +G 
Sbjct: 1   MKLIKLLTAGVFAGLAVTTGQASASVLDTVKQRGTLNCGTDNTAPGFGYLNTTTGQMEGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVDFCRA+++A+  D SK++++ +  K RF A+ + Q+D++  +T     RE S+ + F 
Sbjct: 61  DVDFCRAVAAAVLGDASKVKFVTVTDKSRFDAVLTNQVDVVFAHTTMKPARESSIAIDFL 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMK-YHPIVFER 178
           P+ ++DG G ++     +   + L GA+ C   G+ TE  L   FKA+  +    + +E 
Sbjct: 121 PVNFYDGTGIMVKTDSEVVQFADLEGATFCTTQGSVTETVLTSAFKANGWQGSKVLTYEN 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +E++ AA  + RC+A + D SAL A    + +PS+++ILP+ + KSP A  +   D++W 
Sbjct: 181 LEKLFAALNSGRCNAMSTDKSALAAWAGNSPKPSDYLILPETLDKSPFAGFVAANDSKWR 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           N + W  Y +  AEE  ITQ N+ +  K + +P VQ+FLG+      G+  GL  D+  +
Sbjct: 241 NALRWITYGLFQAEESDITQANLEEKLK-SDDPFVQKFLGV--GGGYGKDFGLPDDFVAQ 297

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPR--GYNALWSKGGLMYAP 339
            I+ MGNYGE++ RNLG  + + + R    NALW++GG +Y+P
Sbjct: 298 AIKAMGNYGEIYARNLGPDTSMFLDRKGTPNALWTEGGAIYSP 340


>gi|190891654|ref|YP_001978196.1| putative amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
 gi|190696933|gb|ACE91018.1| putative amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli CIAT 652]
          Length = 343

 Score =  291 bits (745), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 198/343 (57%), Gaps = 7/343 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M    F++      + FT+ + +AS+L  +K+RG L CG +    GF  +    G  +G 
Sbjct: 1   MKLLKFLTAGVFAGVAFTAANASASVLDTVKQRGVLNCGTDNTAPGFGYLNTTTGQMEGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVDFC+A+++ +  D SK++++ +  K RF A+ + Q+D++  +T     RE S+ + F 
Sbjct: 61  DVDFCKAVAAGVLGDASKVKFITVTDKSRFDAVLTGQVDVVFAHTTIKPARESSIAIDFL 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFER 178
           PI ++DG G ++    GI   + L GA+IC   G+ TE  LA  FKA   K    + +E 
Sbjct: 121 PINFYDGTGLMVKTDAGIKEFADLDGATICTTQGSATETVLAAAFKARGWKDSKVLTYEN 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +E++ +A  + RC+A + D SAL A      +P++++ILPD + KSP    +   D++W 
Sbjct: 181 LEKLFSALNSGRCNAMSTDKSALAAWAGNAPKPADYLILPDTLDKSPFGGFVAANDSKWR 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           N + W  Y +  AEE  ITQ N+ +  K + +P +Q+FLG+      G+  GL+ D+  +
Sbjct: 241 NALRWIEYGLFQAEESEITQANLAEKLK-SEDPFIQKFLGV--GGGYGKDFGLSDDFIAQ 297

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPR--GYNALWSKGGLMYAP 339
            I+ +GNYGE +DRNLG  +++ + R    NALW++GG +Y+P
Sbjct: 298 AIKAVGNYGEAYDRNLGPTTKMYLDRKGTPNALWTQGGAIYSP 340


>gi|323136410|ref|ZP_08071492.1| extracellular solute-binding protein family 3 [Methylocystis sp.
           ATCC 49242]
 gi|322398484|gb|EFY01004.1| extracellular solute-binding protein family 3 [Methylocystis sp.
           ATCC 49242]
          Length = 345

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 153/346 (44%), Positives = 217/346 (62%), Gaps = 10/346 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTN------ASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           + FF+++   ++    +             L +I KRGF+ CG+     GFAE     +W
Sbjct: 4   RRFFLAVALAVMCALAAAQDAEAQIEIGPTLSEILKRGFVICGMTEAD-GFAEPLDGNEW 62

Query: 57  KGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +GFDVD CRAL+SAIFDDP+K+ Y  L AKER  +LQ   +D+L+    WT  R+    +
Sbjct: 63  RGFDVDICRALASAIFDDPTKVMYSALPAKERAASLQGNWVDLLASGAPWTQSRDTGQRI 122

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            +  ++ +DGQ F++ +++  +S   LSG S+CVQ GT+ ELTLAD+F      Y P  F
Sbjct: 123 IYAGVSLYDGQTFLVRRQRSFASARDLSGVSVCVQRGTSYELTLADFFNVRKAPYEPRAF 182

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           E  EE  A Y A +CDA T D S LYA +     P++H +LPD++SK+P  P + QGD +
Sbjct: 183 ETFEEAAAGYEAGKCDALTADASMLYAARAKFASPADHAVLPDMLSKAPRGPVVRQGDDQ 242

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296
           W NIV WT YAM+ AEEL ++  N +   K + NPD++R +G+D   ++G  LGL K+W 
Sbjct: 243 WLNIVRWTLYAMINAEELQVSILNADLALK-SENPDIRRLVGVD--GDLGAGLGLAKNWA 299

Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +RII+H+GNYG+MFDRNLG  + + + R  NALWS GGLMYAPP+R
Sbjct: 300 FRIIKHIGNYGDMFDRNLGPATPMAMDRRINALWSNGGLMYAPPVR 345


>gi|83591779|ref|YP_425531.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC
           11170]
 gi|83574693|gb|ABC21244.1| extracellular solute-binding protein, family 3 [Rhodospirillum
           rubrum ATCC 11170]
          Length = 364

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 124/351 (35%), Positives = 190/351 (54%), Gaps = 17/351 (4%)

Query: 6   FVSILCLIILFFTS-------------FSTNASILGDIKKRGFLKCGINTGLVGFAEVKA 52
              +L +     +               +     L  +++RG+L CG+N  L G   V  
Sbjct: 15  LAVVLAIGFALLSPLAGRAEQAPASPISAAEGDTLRQVRERGYLTCGVNARLTGLGSVDP 74

Query: 53  NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
           +G W+GFD+D+CRA+++A   D  +++++PL+ + R LAL S ++D+LSRNT WTL R+ 
Sbjct: 75  DGVWRGFDIDYCRAVAAAALGDSGRVRFVPLDIRSRLLALTSGEVDLLSRNTTWTLERDA 134

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKY 171
             G++F  ++ FDG G +  K      ++ L     +CVQ+  T    L     A  + +
Sbjct: 135 GQGISFVGVSLFDGPGLLAWKDLPGDDLASLPPTARLCVQSAATAARVLPARMAAAGLSF 194

Query: 172 HPIVFERVEEIDAAYRAHRCDAYTGDISALYALK-LTNDRPSEHVILPDIISKSPLAPAI 230
             + F  +EE   A     CD Y  D +AL +L      RP    +LPD+++  PL PA+
Sbjct: 195 TILPFRSLEEARMALFTRACDGYVADRTALASLATFEAPRPDALRLLPDLLAVEPLGPAV 254

Query: 231 IQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALG 290
             GD  W++I  WT +A++ AEE G++   +  V + T +P+++RFLG+D    +G  LG
Sbjct: 255 RDGDANWFDIARWTLFALIKAEEEGLSHDRLPAVLESTQDPELRRFLGLDP--GVGAPLG 312

Query: 291 LTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
           L   W  RI+  +G YGE+FDRNLG  S LK+ RG NAL   GGLM APP 
Sbjct: 313 LDDAWVRRIVSQVGTYGEVFDRNLGQGSPLKLERGPNALRRDGGLMVAPPF 363


>gi|296536952|ref|ZP_06898974.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Roseomonas cervicalis ATCC 49957]
 gi|296262721|gb|EFH09324.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein [Roseomonas cervicalis ATCC 49957]
          Length = 338

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 137/344 (39%), Positives = 217/344 (63%), Gaps = 8/344 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M +     +   ++    +   + S  L  ++ RG L CG++    GFA   + G+ +G 
Sbjct: 1   MLRTMLSCLAATLLASAAAAQGSGSPTLDAVRARGQLACGVSGTNPGFALADSRGEMRGS 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           + DFCRA+++A   D  +++++ L +  RF ALQS +ID+L R   W+L RE SLGL F 
Sbjct: 61  EADFCRAVAAATLGDAGRVKFVVLTSTNRFTALQSGEIDLLVRTATWSLGREASLGLLFA 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            IT+ DG  F++H   G+ S ++L GA+IC+  GTTTEL + DYF+   M++ P++ + V
Sbjct: 121 GITFHDGTAFMVHAASGVRSAAELDGATICILPGTTTELAVTDYFRRGGMRFTPVLIDNV 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
            E+ AA+R+ RCD+Y+ D SAL + +        ++ +LP++ISK PL P + +GD +W+
Sbjct: 181 TELRAAFRSGRCDSYSSDASALASFRFGEGAGAGQYALLPEVISKEPLGPLVRKGDDKWF 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           +IV WTH+AM+ AEELGI   +       + NPD++R LG+D   ++G A+GL   W + 
Sbjct: 241 DIVRWTHFAMLAAEELGIRGADAEAALA-SPNPDIRRLLGVD--GDLGRAMGLDNRWAFN 297

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           I+R +GNY E++DRN+   + L +PRG+N +W++GGL YAPPIR
Sbjct: 298 ILRQVGNYAEVWDRNI---APLGVPRGHNRIWTQGGLQYAPPIR 338


>gi|301166613|emb|CBW26189.1| General L-amino acid substrate binding protein [Bacteriovorax
           marinus SJ]
          Length = 347

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 142/342 (41%), Positives = 206/342 (60%), Gaps = 11/342 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M      + L L  L +      AS + +IKKRG L CG++ GL GF+     G+WKGFD
Sbjct: 17  MK--IIFTFLLLTSLSW------ASTISEIKKRGHLNCGVSEGLTGFSIPNEKGEWKGFD 68

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD C+A++ AIF+D  K++++P +  ERF +L  KQIDILSRNT  T  RE++  + F P
Sbjct: 69  VDICKAIAVAIFNDTQKVKFIPTSLGERFNSLAKKQIDILSRNTSRTFSREVTRDIEFAP 128

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + YFD QG ++ K+  I  +  L    ICV+  TTT+  L DYFK HN++   + F+  +
Sbjct: 129 VVYFDTQGILVSKRSKIKKIKDLDNKKICVKNNTTTQQNLIDYFKHHNLRLRQVRFDNND 188

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++   +   RC A T D++ L + K          +L + I K PLAP I+ GD  W N+
Sbjct: 189 QLVLGFLKKRCIALTSDVTTLISEKNHFQNSKSFTLLSERIEKEPLAPVILSGDRRWKNL 248

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V WT Y+++ AEELG++  NI  + K + +P V+RF G  +  N  + LG++  WT  II
Sbjct: 249 VDWTIYSLIWAEELGVSSSNIEAM-KTSADPRVKRFFG--EGFNFEKMLGVSNGWTGNII 305

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
             +GNY E+F RNLG  S LKIPRG N+LW  GG++Y+PP++
Sbjct: 306 SKIGNYSEVFHRNLGRDSNLKIPRGLNSLWKDGGILYSPPMK 347


>gi|87119292|ref|ZP_01075190.1| ABC glutamate/glutamine/aspartate/asparagine transporter,
           periplasmic substrate-binding protein [Marinomonas sp.
           MED121]
 gi|86165683|gb|EAQ66950.1| ABC glutamate/glutamine/aspartate/asparagine transporter,
           periplasmic substrate-binding protein [Marinomonas sp.
           MED121]
          Length = 344

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 109/346 (31%), Positives = 174/346 (50%), Gaps = 11/346 (3%)

Query: 2   YKDFFVSILCLIILFFTSFSTN----ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
            K      L ++     S +       S L  + +RG L CG+       + +   G W+
Sbjct: 5   KKTSLYLTLFILSFSTLSQAAQIIKPNSTLTQVIQRGDLNCGVFPDDPSRSAINLEGQWQ 64

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF VDFCRA ++A+  D   + Y+ + A  RF  L   + D++  ++ WT  RE    L 
Sbjct: 65  GFYVDFCRATAAAVLKDQEFVNYIEVGATTRFSTLVELKTDVVMYSSTWTHSREFQYQLD 124

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F  +  FDGQGFI+     I +++ L   ++CV   T+T   L D  ++  +K   +   
Sbjct: 125 FPAVYLFDGQGFIVRAATNIQTINDLDNKTVCVTQNTSTHQNLVDLIESRELKTKILFSN 184

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
                   +R   CDAYT D   L   +    D+P  + +LPD IS+ P+ P +   D +
Sbjct: 185 GDS----FFRGGPCDAYTADRMNLATNRANRTDKPENYRLLPDTISREPIGPMVRNDDAQ 240

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296
           W  I+    +A++ AEE  I   N++Q    + N +VQ  LG  K   IG+ LGL   W 
Sbjct: 241 WSRIIRAVVHALILAEEKNINAANVDQALTQSKNAEVQNLLG--KKGEIGQQLGLDNQWA 298

Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           YR I+ +GNYGE+++R+ G+ S++ + RG N  W++GG++YAP  +
Sbjct: 299 YRAIKAVGNYGEVYNRHFGSHSKIGVKRGINQPWNQGGILYAPIFK 344


>gi|261752067|ref|ZP_05995776.1| cationic amino acid ABC transporter [Brucella suis bv. 5 str. 513]
 gi|261741820|gb|EEY29746.1| cationic amino acid ABC transporter [Brucella suis bv. 5 str. 513]
          Length = 277

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 154/273 (56%), Positives = 204/273 (74%), Gaps = 3/273 (1%)

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
           F DP+K+++ PLNAKERF ALQS ++D+L RNT WT+ R+ SLGL F  I Y+DGQGF++
Sbjct: 6   FGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMI 65

Query: 132 --HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
              K  GI+S  QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + 
Sbjct: 66  NSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEKIEEANAAYDSG 125

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD  W ++V WTH A++
Sbjct: 126 RCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRWTHNALL 185

Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309
            AEE GITQ N+ ++ K + NPD++R LG +  + IG  LGL KDW  +II+ +GNYGE+
Sbjct: 186 NAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEI 244

Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           F+RN+G+ S LKI RG NA W+KGGL Y  P+R
Sbjct: 245 FERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 277


>gi|87124569|ref|ZP_01080418.1| ABC transporter for amino acids, substrate binding protein
           [Synechococcus sp. RS9917]
 gi|86168141|gb|EAQ69399.1| ABC transporter for amino acids, substrate binding protein
           [Synechococcus sp. RS9917]
          Length = 343

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 133/333 (39%), Positives = 196/333 (58%), Gaps = 8/333 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
             T     AS L  I++RG L+CG++  + GF+ ++ +G + G DVD C+A ++A   + 
Sbjct: 13  CATLGEGGASRLDLIRQRGSLRCGVSGKIPGFSYLQTDGRYFGLDVDLCKAFAAAFVPET 72

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS--LGLAFRPITYFDGQGFIMHK 133
             + Y PL A ERF AL++ +ID+LSRNT   L R+ +   GL+F P+ + DGQG ++  
Sbjct: 73  GAVDYRPLTAPERFTALRTGEIDLLSRNTTMNLSRDAAGGNGLSFAPVVFHDGQGLMVSS 132

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
             GI  +  L G SICV +GTTTE  L D F+A  + Y PI ++ + ++ A Y   RC A
Sbjct: 133 GSGIKRLEDLQGKSICVGSGTTTEQNLNDAFEARGIAYTPIKYQDLNQVVAGYLQGRCQA 192

Query: 194 YTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEE 253
            T D S L A +        H IL +++SK PLAPA + GD    + + W  YA++TAEE
Sbjct: 193 MTSDRSQLAAARSGFADQRNHRILEEVLSKEPLAPASVGGDQRLADAMRWVVYALITAEE 252

Query: 254 LGITQKNINQVSKDTTNP----DVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309
           LGITQ N+ +   +         ++RF G++    +GE LGL  D+  ++I+  GNYGE+
Sbjct: 253 LGITQANVQERYAEAQRRPELTRLRRFFGLNA--GLGETLGLRDDFVVQVIQATGNYGEI 310

Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + RNLG  S++ IPRG N L   GG+M APP +
Sbjct: 311 YARNLGPDSQVPIPRGLNRLGRDGGVMVAPPFQ 343


>gi|209549223|ref|YP_002281140.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209534979|gb|ACI54914.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 344

 Score =  286 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 121/343 (35%), Positives = 198/343 (57%), Gaps = 6/343 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M     +       + FT+   +ASIL  +K+RG L CG +    GF  +    G  +G 
Sbjct: 1   MTLLKILIAGVFAGMAFTATHASASILDTVKQRGVLNCGTDNTAPGFGYLNTTTGQMEGL 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVDFC+A+++++  D +KI+++ +  K RF A+ + Q+D++  +T     RE S+ + F 
Sbjct: 61  DVDFCKAVAASVLGDAAKIKFITVTDKSRFDAVLTGQVDVVFAHTTIKPARESSIAIDFL 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKY-HPIVFER 178
           PI ++DG G ++    GI   + L GA+IC   G+ TE  LA  FKA   K    + +E 
Sbjct: 121 PINFYDGTGLMVKADAGIKEFADLDGATICTTQGSATETVLAAAFKARGWKDSKVLTYEN 180

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
           +E+  +A  + RC+A + D SAL A      +P++++ILPD + KSP    ++  D++W 
Sbjct: 181 LEKFFSALNSGRCNAMSTDKSALAAWAGNAPKPADYLILPDTLDKSPFGGFVVANDSKWR 240

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           N + W  Y +  AEE GITQ N+ +  K + +P VQ+FLG +     G+  GL+ D+  +
Sbjct: 241 NALRWIEYGLFQAEESGITQANLAEKLK-SEDPFVQKFLGSNG-GGYGKDFGLSDDFIAQ 298

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPR--GYNALWSKGGLMYAP 339
            I+ +GNYGE +DRNLG ++++ + R    NALW++GG +Y+P
Sbjct: 299 AIKAVGNYGEAYDRNLGPKTKMYLDRKGTPNALWTQGGAIYSP 341


>gi|260757721|ref|ZP_05870069.1| cationic amino acid ABC transporter [Brucella abortus bv. 4 str.
           292]
 gi|260761546|ref|ZP_05873889.1| cationic amino acid ABC transporter [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260668039|gb|EEX54979.1| cationic amino acid ABC transporter [Brucella abortus bv. 4 str.
           292]
 gi|260671978|gb|EEX58799.1| cationic amino acid ABC transporter [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 277

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 153/273 (56%), Positives = 203/273 (74%), Gaps = 3/273 (1%)

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
           F DP+K+++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F  I Y+DGQGF++
Sbjct: 6   FGDPTKVKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMI 65

Query: 132 --HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
              K  GI+S  QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + 
Sbjct: 66  NSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEKIEEANAAYDSG 125

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           RCDAYT D S+LY ++L    P +HVILP+IISK P    + QGD  W ++V WTH A++
Sbjct: 126 RCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRWTHNALL 185

Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309
            AEE GITQ N+ ++ K + NPD++R LG +  + IG  LGL KDW  +II+ +GNYGE+
Sbjct: 186 NAEEYGITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEI 244

Query: 310 FDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           F+RN+G+ S LKI RG NA W+KGGL Y  P+R
Sbjct: 245 FERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR 277


>gi|144898062|emb|CAM74926.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 340

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 121/346 (34%), Positives = 197/346 (56%), Gaps = 10/346 (2%)

Query: 1   MYKDFFVSILC---LIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K   ++ L    LI    T     A  L ++  RG ++CG++        +  NG W 
Sbjct: 1   MLKRIAIAALTALPLIAGLTTPPQARAGTLEEVTARGVIRCGVSEYGPALTAMNENGQWA 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GF  DFCRA ++A   +   + ++ +++ +RF AL+ K +D+LS  + WT  R+   GLA
Sbjct: 61  GFYTDFCRAFAAATLGNARAVDFVSVSSLDRFEALRQKAVDVLSEASTWTSERD-LGGLA 119

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F   +  DGQGF++ +  GIS + QL G  ICV +  T+   L    K  N+ +    + 
Sbjct: 120 FPATSMMDGQGFLVRRDGGISGLDQLKGRRICVISHATSVGGLNRVNKVRNLGFKIQEYS 179

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTN-DRPSEHVILPDIISKSPLAPAIIQGDTE 236
            ++   AA+   +CDA + D   L +L+      P+++V+LP+ I++ PL+P +++ D  
Sbjct: 180 SIQGSFAAFFDRQCDAVSTDGIILASLRQQLAPNPADYVLLPERITREPLSPVVLKNDRR 239

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296
           W +I+ WT  A + AEELGIT  N+ Q   ++T+P+++R LG+D   ++G  LGL K W 
Sbjct: 240 WEDIIRWTILATIAAEELGITSANVKQHL-NSTDPEIRRLLGLD--GDMGARLGLDKAWA 296

Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            R+I  +GNYGE+++RNL     L + RG NAL S+GG++++PP R
Sbjct: 297 MRVIEQVGNYGEIYNRNL--TKVLGLERGQNALSSQGGILWSPPFR 340


>gi|110347225|ref|YP_666043.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1]
 gi|110283336|gb|ABG61396.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Chelativorans sp. BNC1]
          Length = 340

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 183/344 (53%), Gaps = 6/344 (1%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +    +    ++L         SI   +++RG++ CG + G+ G +     G W GFD
Sbjct: 1   MKRVTQFAAAAAMVLIGAGSVNAQSITDKVRQRGYVSCGASQGVPGLSRPDDKGVWTGFD 60

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           VD CRA+++A F D  K Q++PLNA +R  A+Q+ ++D+L+R T WT  R++   + F  
Sbjct: 61  VDSCRAVAAAFFGDSQKAQFVPLNAAQRIPAVQTGEVDVLARTTTWTYTRDV--AVRFVA 118

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM-KYHPIVFERV 179
           I   DG   ++ K   + + + L G +IC+Q G +      D  +  N  K   + F+  
Sbjct: 119 INLVDGDAIMLRKSLNVGAAADLEGLTICLQGGGSLVENALDLIEQQNQVKVERVYFDST 178

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
                AY   RCD Y  D  A+   +      P EH I     +  PLA AI +GD  W+
Sbjct: 179 ILARDAYFGGRCDGYMSDGFAIAGQRAAVASNPDEHAIFQSGATTEPLALAIPRGDDRWF 238

Query: 239 NIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYR 298
           +IV +   AMV AE+ GIT KN+++++   T+ + ++ LG++    IGE L L   W Y 
Sbjct: 239 DIVRYAFNAMVWAEDRGITSKNVDEIAASATDGETRKALGVEP--GIGEPLKLDDKWIYN 296

Query: 299 IIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +I+ +GNYGE+F RNLG +S LK  R  NAL   GG+++  P +
Sbjct: 297 VIKQVGNYGEVFARNLGEESPLKAERRLNALPRDGGILFPIPFK 340


>gi|319782291|ref|YP_004141767.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317168179|gb|ADV11717.1| extracellular solute-binding protein family 3 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 344

 Score =  281 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 119/339 (35%), Positives = 196/339 (57%), Gaps = 3/339 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKC-GINTGLVGFAEVKANGDWKGF 59
           M        L L+     + +     L  +K RG L C G +   +GFAEV   G+WKG 
Sbjct: 4   MKWGAAAMALGLVHFAAPAEAAGGKTLEAVKARGVLNCTGHDGSYLGFAEVDDKGNWKGM 63

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D CRA+++A+  DP+K++ +P++  +R+ +LQS  +DI+ + +  TL R+  LGL F 
Sbjct: 64  DIDLCRAVATAVLGDPAKLKVVPISWAQRWPSLQSGDVDIIIKASGGTLSRDTELGLQFS 123

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              Y      + HK+  + S+   +G +IC+ AGT+ E  +A Y     +K  P++ E+ 
Sbjct: 124 MSYYLGTTKVMAHKELNLKSLKDAAGGTICIPAGTSQEQQVAAYTAKLGIKLEPVLIEKT 183

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           EE++ AY + RCD Y      L   ++   +  +HVILPD+++  P    + QGD  W +
Sbjct: 184 EELEQAYFSGRCDLYAQWGPTLAIARIAKSKVDDHVILPDVLAVEPEVMIMRQGDDNWVD 243

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           I +WT   ++ AE+ GIT KN+++V    T+P V +FLG+  +  +G+ LGL  DW Y++
Sbjct: 244 IANWTLSTLIFAEQEGITSKNVDEVKAKPTSPQVAKFLGV--TPGMGKGLGLDDDWAYKV 301

Query: 300 IRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYA 338
           I+++GNYGE+F+R+LG  S  K+ R    LW+ GG+++ 
Sbjct: 302 IKNVGNYGEIFERDLGKDSPYKMDRELTNLWNNGGVLFP 340


>gi|170690235|ref|ZP_02881402.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
 gi|170144670|gb|EDT12831.1| extracellular solute-binding protein family 3 [Burkholderia
           graminis C4D1M]
          Length = 345

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 136/339 (40%), Positives = 192/339 (56%), Gaps = 6/339 (1%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
                L L  +   S + +   L  +K RG L+CG++ G+ GF+   A G W G DVDFC
Sbjct: 12  LLGLWLSLASVPSISNAADGEALASVKTRGVLRCGVSEGVAGFSSQDAAGQWSGIDVDFC 71

Query: 65  RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYF 124
           RAL++A   D  K+ ++PL A ERF AL++++ID+LSRNT WTLLRE +L   F  + ++
Sbjct: 72  RALAAAALGDSRKVAFVPLKASERFPALETRRIDVLSRNTTWTLLREGALKAQFAGVLFY 131

Query: 125 DGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDA 184
           D Q F++           L GA++CVQ  T+T   L  Y  A      P+V    +E   
Sbjct: 132 DNQAFMVPAASASQLAGALKGATVCVQKDTSTLSHLIAYSDASGADIKPLVAGSADEARR 191

Query: 185 AYRAHRCDAYTGDISALYALKLTNDRPSE-HVILPDIISKSPLAPAIIQGDTEWYNIVSW 243
           A+ A RC AYT D S L AL L     S+   ILP+ ISK PL P +  GD  W  +V W
Sbjct: 192 AFFAGRCAAYTADASYLAALLLHAPGGSQAFAILPERISKEPLGPVVRGGDQAWLTLVRW 251

Query: 244 THYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHM 303
               ++ AEE+ +T++N+    ++ +   V R L  D +  +   +G+   WT R +  +
Sbjct: 252 VLLTLIAAEEMDVTRENLEIRLRNPS---VSRALVPDDT--VTRTIGVEPGWTVRALESV 306

Query: 304 GNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           GNYG+MFDRN+G  S L + RG N LW++GGLMYAPPIR
Sbjct: 307 GNYGQMFDRNVGAHSPLGLARGTNDLWTRGGLMYAPPIR 345


>gi|103487895|ref|YP_617456.1| extracellular solute-binding protein [Sphingopyxis alaskensis
           RB2256]
 gi|98977972|gb|ABF54123.1| extracellular solute-binding protein, family 3 [Sphingopyxis
           alaskensis RB2256]
          Length = 365

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 124/324 (38%), Positives = 195/324 (60%), Gaps = 6/324 (1%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +   S L  I+ RG L C I+TG +G + +   G W+GF VD+CRAL++A+  D  K++
Sbjct: 47  AAAKGSTLARIRARGTLNCAIHTGQLGMSYLDKRGRWQGFFVDYCRALAAAVLGDARKVR 106

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           ++P+ + +RF  +Q+ + D+LSR T WTL R+  LG+ F    Y+DGQ F++ ++ G+  
Sbjct: 107 FMPVASNKRFTIVQTGEADVLSRTTTWTLTRDTDLGVNFVGTMYYDGQSFLVPRRSGVRL 166

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI- 198
            + L GASIC+  GTT+EL  A+YF+   +++  +VFE  EE   A+ A RCDA T D  
Sbjct: 167 PTDLDGASICITKGTTSELNTAEYFERKGLRFLSVVFENPEEAKLAFFAGRCDAMTTDAF 226

Query: 199 SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258
           +           P ++V+LP+ ++K P+ P +   D +WY I  W   A+  AEE+G+T+
Sbjct: 227 TLTVIRLADTAHPDDYVVLPERLTKEPVGPVVRSDDEQWYEINKWVLNALFAAEEMGVTR 286

Query: 259 KNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
            N  ++   + +P+V++ LG       G++LGL  DW YR I   GNYGE+FDR++   +
Sbjct: 287 ANAARMRMASRDPEVRKMLG--GLPGFGKSLGLDDDWAYRAIEATGNYGEIFDRHI---T 341

Query: 319 ELKIPRGYNALWSKGGLMYAPPIR 342
            L + RG N L+  GGL+Y  P+R
Sbjct: 342 PLGVERGQNKLYRDGGLIYPLPMR 365


>gi|260545549|ref|ZP_05821290.1| cationic amino acid ABC transporter [Brucella abortus NCTC 8038]
 gi|260096956|gb|EEW80831.1| cationic amino acid ABC transporter [Brucella abortus NCTC 8038]
          Length = 266

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 149/267 (55%), Positives = 198/267 (74%), Gaps = 3/267 (1%)

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM--HKKK 135
           +++ PLNAKERF A QS ++D+L RNT WT+ R+ SLGL F  I Y+DGQGF++   K  
Sbjct: 1   MKFTPLNAKERFTAFQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMINSKKLA 60

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           GI+S  QLSGASICVQAGTTTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + RCDAYT
Sbjct: 61  GINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEKIEEANAAYDSGRCDAYT 120

Query: 196 GDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            D S+LY ++L    P +HVILP+IISK P    + QGD  W ++V WTH A++ AEE G
Sbjct: 121 TDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRWTHNALLNAEEYG 180

Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
           ITQ N+ ++ K + NPD++R LG +  + IG  LGL KDW  +II+ +GNYGE+F+RN+G
Sbjct: 181 ITQANVEEMKK-SDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEIFERNIG 239

Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342
           + S LKI RG NA W+KGGL Y  P+R
Sbjct: 240 SGSPLKIARGLNAQWNKGGLQYGIPVR 266


>gi|186470673|ref|YP_001861991.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
 gi|184196982|gb|ACC74945.1| extracellular solute-binding protein family 3 [Burkholderia
           phymatum STM815]
          Length = 345

 Score =  275 bits (703), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 138/328 (42%), Positives = 200/328 (60%), Gaps = 7/328 (2%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
              + +  +  L  IK RG L+CGI+ G+ GF+     G + G D DFCRA+++A+  DP
Sbjct: 24  SAVATAAGSETLAHIKARGTLRCGISEGIAGFSAADGAGHFSGIDADFCRAVAAAVLGDP 83

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
           +K+ ++PL A  RF AL++ +ID+L+RNT WTLLRE +LG+ F  I ++D Q F++ +K 
Sbjct: 84  NKVTFVPLKASARFPALRTDRIDLLARNTTWTLLREGTLGIQFAGILFYDAQAFMVSRKN 143

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
           G +S S L+GA++CVQ  TT+E  L  Y  A+++   P+V   V E+  A+ + RC A T
Sbjct: 144 GTASSS-LNGATVCVQQDTTSERNLMGYASANSLNVKPLVVGSVPELAQAFFSGRCSAAT 202

Query: 196 GDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            D S L  LK       S   ILP+ +SK PL PA+   D  W  +V W  + ++TAEEL
Sbjct: 203 ADASLLSVLKSRAPGGASTVEILPERLSKQPLGPAVRGDDDAWLVVVRWVLFTLITAEEL 262

Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314
           G+T++N    +    +P V R L  D +  +   LG+   WT R ++  GNYGEMF+RNL
Sbjct: 263 GVTRENY---AARVRDPLVARALVPDAT--VTATLGIEPGWTLRALQSAGNYGEMFERNL 317

Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342
           G  S L + RG N LW+ GGLMYAPP++
Sbjct: 318 GAGSPLGLERGLNNLWTHGGLMYAPPMQ 345


>gi|269964209|ref|ZP_06178500.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio harveyi 1DA3]
 gi|269831058|gb|EEZ85226.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Vibrio harveyi 1DA3]
          Length = 285

 Score =  274 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 143/271 (52%), Positives = 190/271 (70%), Gaps = 3/271 (1%)

Query: 72  FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM 131
             + +K++Y+PL AKERF ALQS +ID+LSRNT WTL R+ +LGL F  + Y+DGQGF++
Sbjct: 18  LGNKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMV 77

Query: 132 HKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
            K  G+SS  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+   +    + A RC
Sbjct: 78  KKDLGVSSAKELDGASVCVQSGTTTELNLADYFRNQGMAYKPVVFDTAAQTSKGFDAGRC 137

Query: 192 DAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
           D  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W+NI  WT +AMV A
Sbjct: 138 DVLTTDQSGLYALRLNLKDPSSATVLPEIISKEPLGPVVRQGDDQWFNIAKWTLFAMVNA 197

Query: 252 EELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFD 311
           EE GIT KN +++ K + +P+++R LG+D     G+ LG+  DW Y++I+ +GNYGE F+
Sbjct: 198 EEYGITSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGYQVIKQVGNYGESFE 254

Query: 312 RNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           R +G  S LKI RG NALW+ GG MYAPPIR
Sbjct: 255 RTVGTGSPLKISRGVNALWNAGGFMYAPPIR 285


>gi|148240911|ref|YP_001220412.1| general L-amino acid-binding periplasmic protein [Bradyrhizobium
           sp. BTAi1]
 gi|146411287|gb|ABQ39740.1| General L-amino acid-binding periplasmic protein [Bradyrhizobium
           sp. BTAi1]
          Length = 339

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 113/323 (34%), Positives = 184/323 (56%), Gaps = 7/323 (2%)

Query: 20  FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQ 79
            +   S++  IK+RG++ CG + G+ G +    NG ++GFD D CR  ++AI  D  KI+
Sbjct: 20  SAGAQSVVNKIKQRGYVSCGASQGVPGLSRPDENGYYRGFDSDMCRTFAAAILGDKDKIR 79

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
           ++PLNA +RF ALQ+ +ID+LSR +  TL R+  +   F  IT +D  G ++ K   I+ 
Sbjct: 80  FVPLNAGQRFPALQTGEIDVLSRTSTITLSRDTVVR--FVWITLYDTDGLLVRKADKITD 137

Query: 140 VSQLSGASICVQAGTT-TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
             QL+G ++C+Q G + TE ++ +  + + +    + F+   +   A+   RCD Y  D 
Sbjct: 138 PKQLAGKTVCLQGGGSLTERSIEETEEEYGITMKKVYFDSTIQARDAFFGGRCDTYVTDG 197

Query: 199 SALYALKLT-NDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGIT 257
           +A    + +    P ++ I+    +  P   A+ +GD + ++I  WT  A++ AE  GIT
Sbjct: 198 TAAAGQRASVAKNPDDYDIIKVGHAAEPNGVAVARGDDQLFDITRWTINALLWAELHGIT 257

Query: 258 QKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQ 317
            +NI++  K + + +++R LG +     G+ LGL   W Y +++ MGNY E++D NLG  
Sbjct: 258 ARNIDEKLK-SGSIEIKRVLGQEP--GFGKPLGLDDKWVYNVVKQMGNYAEIWDNNLGKS 314

Query: 318 SELKIPRGYNALWSKGGLMYAPP 340
           S LKI RG NALW  GGL Y  P
Sbjct: 315 SPLKIDRGLNALWKDGGLNYPYP 337


>gi|254707031|ref|ZP_05168859.1| lysine-arginine-ornithine-binding periplasmic protein [Brucella
           pinnipedialis M163/99/10]
          Length = 251

 Score =  271 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 140/252 (55%), Positives = 186/252 (73%), Gaps = 3/252 (1%)

Query: 93  QSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM--HKKKGISSVSQLSGASICV 150
           QS ++D+L RNT WT+ R+ SLGL F  I Y+DGQGF++   K  GI+S  QLSGASICV
Sbjct: 1   QSGEVDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMINSKKLAGINSALQLSGASICV 60

Query: 151 QAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDR 210
           QAGTTTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + RCDAYT D S+LY ++L    
Sbjct: 61  QAGTTTELNMADYFRANKMEYNPVVFEKIEEANAAYDSGRCDAYTTDQSSLYGVRLALAN 120

Query: 211 PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTN 270
           P +HVILP+IISK P    + QGD  W ++V WTH A++ AEE GITQ N+ ++ K + N
Sbjct: 121 PDDHVILPEIISKEPFGLTVRQGDARWADVVRWTHNALLNAEEYGITQANVEEMKK-SDN 179

Query: 271 PDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALW 330
           PD++R LG +  + IG  LGL KDW  +II+ +GNYGE+F+RN+G+ S LKI RG NA W
Sbjct: 180 PDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEIFERNIGSGSPLKIARGLNAQW 239

Query: 331 SKGGLMYAPPIR 342
           +KGGL Y  P+R
Sbjct: 240 NKGGLQYGIPVR 251


>gi|113478121|ref|YP_724182.1| Na-Ca exchanger/integrin-beta4 [Trichodesmium erythraeum IMS101]
 gi|110169169|gb|ABG53709.1| Na-Ca exchanger/integrin-beta4 [Trichodesmium erythraeum IMS101]
          Length = 3427

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 116/325 (35%), Positives = 174/325 (53%), Gaps = 13/325 (4%)

Query: 25   SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN 84
             +L  IK+RG LK G+     GFA   +NG+++GFDVD  +A+++AIF DP K++    +
Sbjct: 2867 DLLAKIKERGVLKLGLPDNEPGFAVKMSNGEYEGFDVDLGKAIAAAIFGDPEKLEVKTQS 2926

Query: 85   AKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS 144
             K+ F    +  +DI +      L+R+ SLG+ F PI  + GQG ++    GI+ +  L+
Sbjct: 2927 FKDSFANTANGVVDISAMGITHNLVRDASLGIDFGPIYLYTGQGVLVRNDSGITVLPALN 2986

Query: 145  GASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYAL 204
            G  + V  G T+   + D          P  F   +E+ AAY     DA   D++ L   
Sbjct: 2987 GRRVGVLEGATSLQNIQDTITELGGDIIPAEFTTNDEMFAAYDDGDIDAVITDMTILNGR 3046

Query: 205  KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
                  P EH IL DI+SK PL   I +  +EW ++V W   A+V AEE  IT KNI ++
Sbjct: 3047 VQNLSNPKEHKILDDILSKEPLGLIIDENQSEWSDVVRWVTNALVQAEEYDITSKNIKRL 3106

Query: 265  SKDTTNPD--------VQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
              +  + D        V++FLGI+   NIG+ LGL  D+   +I+ +GNYGE+++R    
Sbjct: 3107 MANNLDDDPNNDSDPVVRQFLGIE--GNIGKVLGLPNDFVPNVIKAVGNYGEIYERYF-- 3162

Query: 317  QSELKIPRGYNALWSKGGLMYAPPI 341
             S L +PR  N L+S  GL YA P+
Sbjct: 3163 DSNL-LPREQNELFSNFGLQYALPL 3186



 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 104/323 (32%), Positives = 168/323 (52%), Gaps = 27/323 (8%)

Query: 27   LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
            L DI KRG +K  I+           +G+   FD++F   +++A+F D SK++ +     
Sbjct: 2548 LDDIIKRGQIKVAISG----------SGNE--FDLEFAEVIAAAVFGDASKVKSITSKFS 2595

Query: 87   ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
            + F  +   + D+ ++    TL R+  L + F P   FD Q  I+     I++VS L+  
Sbjct: 2596 KSFELVADGKADLAAQRITATLGRDGELNVDFAPTYLFDYQTVIVPNDSDITNVSHLNEQ 2655

Query: 147  SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            +I V  GTT  + L +  +   +K+ P +FE  EE+ AAY A   DAY+ D S +     
Sbjct: 2656 TIGVIEGTTALINLQNQLEVEGIKFTPKLFETAEEMIAAYDAGEVDAYSHDRSLILENLD 2715

Query: 207  TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
               +P  H +L   +SK P++ A+ + D++W ++V W  Y  + AEE GI+ +NI +   
Sbjct: 2716 QLSQPENHRLLDVELSKEPISLALPENDSQWADVVRWAGYVPIQAEEFGISSQNIAEFIA 2775

Query: 267  DTTNPD--------VQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQS 318
              T+ +        ++RFLGI+   N+GE LGL  D+   II  +GNY E++DR+     
Sbjct: 2776 LNTDDNPTNDSSLGIRRFLGIE--GNLGETLGLPNDFAVNIINQVGNYSEIYDRHFS--- 2830

Query: 319  ELKIPRGYNALWSKGGLMYAPPI 341
               I    N+LWS GG +Y+PP 
Sbjct: 2831 --GIEGDRNSLWSDGGFLYSPPF 2851


>gi|117923521|ref|YP_864138.1| extracellular solute-binding protein [Magnetococcus sp. MC-1]
 gi|117607277|gb|ABK42732.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Magnetococcus sp. MC-1]
          Length = 342

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 111/328 (33%), Positives = 181/328 (55%), Gaps = 4/328 (1%)

Query: 16  FFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDP 75
                +  +  L  ++ RG L CG+ TG   F++ + +G W GF  D+CRAL+ A+ DD 
Sbjct: 18  APAQAAPASDTLDKVRARGLLNCGVMTGTPAFSQQQPDGAWHGFFADWCRALAVAVLDDA 77

Query: 76  SKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK 135
             + ++ +    RF AL   Q+D++  NT WTL RE    + F  I  +DGQ     K  
Sbjct: 78  RAVHFIQVTPATRFKALTELQVDVVMSNTTWTLSREYQYQVRFPAIYLYDGQAIATRKDT 137

Query: 136 GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYT 195
              +++Q + A++CV+  +T+   L +Y + +N+ ++ +   +   I  A+  HRCD  T
Sbjct: 138 RWHTLAQANQATVCVEPNSTSHANLQEYAQRNNLNFNYLALNQQG-IITAFLEHRCDLIT 196

Query: 196 GDI-SALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            D  +    LK T     ++V+  + +S+ PLAP +   D  W  IV     A++ A+E 
Sbjct: 197 DDRIALTANLKTTASNDQDYVVFAETLSREPLAPMVRADDERWQRIVRMVVQALLVADEK 256

Query: 255 GITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNL 314
           G+++  + Q  +  ++P+VQR LG +     G+ +GL++ W  R+I  +GNYGE+F R+L
Sbjct: 257 GVSRDALKQNRERLSDPEVQRLLGSEDDP--GQFVGLSRGWARRMIEAVGNYGELFARHL 314

Query: 315 GNQSELKIPRGYNALWSKGGLMYAPPIR 342
           G QS L++PR  N  WS+GGL YAPP R
Sbjct: 315 GAQSSLQMPRLLNRPWSRGGLFYAPPFR 342


>gi|148555539|ref|YP_001263121.1| extracellular solute-binding protein [Sphingomonas wittichii RW1]
 gi|148500729|gb|ABQ68983.1| extracellular solute-binding protein, family 3 [Sphingomonas
           wittichii RW1]
          Length = 347

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 125/312 (40%), Positives = 199/312 (63%), Gaps = 5/312 (1%)

Query: 26  ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNA 85
            L  ++ RG+++CG +    GF+    +G W+G DVD CRA++ A   D  K++++PL  
Sbjct: 34  TLEAVRSRGYVRCGASKEAPGFSGPDESGRWRGLDVDTCRAIAVAALGDREKVRFVPLTG 93

Query: 86  KERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSG 145
           ++R  ALQ+ +ID+L R T WTL R+   G+ F   TY+D   F++ +K G+  ++ L G
Sbjct: 94  QQRITALQTGEIDVLPRTTTWTLRRDA-AGINFTIPTYYDYTAFMVRRKVGVRDLAGLRG 152

Query: 146 ASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK 205
           AS CVQ+G+ TE+ LAD  + + +   P++F+ V+    A+ + RCDA   D SAL AL+
Sbjct: 153 ASACVQSGSMTEVILADVSRKYRLALRPVIFDNVQSTRQAFLSGRCDALITDASALAALR 212

Query: 206 LTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQV 264
            T   R  ++VILP   + +PL PA+  GD +W++IV ++  AM+  E+LGI +   +++
Sbjct: 213 ATLPGRADDYVILPADSNVAPLTPAVRHGDDQWFDIVKFSIEAMIDGEQLGIGRDTADRL 272

Query: 265 SKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPR 324
              + +P+V+RFLG++     G ALG++ D+ Y+I+R +GNYGE++D NLG++S L IPR
Sbjct: 273 RA-SADPNVRRFLGVEP--GNGRALGISDDFAYQIVRQIGNYGEVYDDNLGSRSRLNIPR 329

Query: 325 GYNALWSKGGLM 336
           G N L   GGLM
Sbjct: 330 GLNRLQRDGGLM 341


>gi|83593850|ref|YP_427602.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC
           11170]
 gi|83576764|gb|ABC23315.1| extracellular solute-binding protein, family 3 [Rhodospirillum
           rubrum ATCC 11170]
          Length = 373

 Score =  266 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 109/321 (33%), Positives = 166/321 (51%), Gaps = 3/321 (0%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           N   L  I+ RG + CG N  + GF    ++G+W+GF +DFCRAL++A   DP+  + +P
Sbjct: 55  NGDTLTSIRDRGSVTCGTNP-IPGFGFPDSDGNWRGFFIDFCRALAAATLGDPTAFEVVP 113

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           + +  R+ AL S   D+    + WTL R+ +LG  F  +  +DGQ F+        SV  
Sbjct: 114 VESNSRWEALNSHTTDVNVDGSTWTLSRDTALGFDFPGVLIYDGQRFLAKPSVPEGSVKA 173

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
            +G  +C+  GTT E+ L D+ K ++++   I  E  E    ++   RC+ +  D   L 
Sbjct: 174 AAGLRVCIIMGTTAEVNLRDFLKKNDLEMTVIATESDEGAWTSFLKGRCELFVNDGIGLA 233

Query: 203 ALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
                    P  + ++ + ISK PL P +   D +W  I  W    ++ AEE GI+   +
Sbjct: 234 LRNALHMTPPRVNHLMTEAISKEPLGPVVRGDDHQWLEINRWVLNVLIAAEEAGISSTTL 293

Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
              S         R   +    +   ALGL   W  R+I  +GNYGE+FDRNLG  SE+ 
Sbjct: 294 VDPSPTADLSSEDRVF-VGGPEDNAAALGLEPGWARRVIAAVGNYGEVFDRNLGKGSEIG 352

Query: 322 IPRGYNALWSKGGLMYAPPIR 342
           + RG NALWS+GGLM +PP++
Sbjct: 353 LDRGVNALWSEGGLMISPPLQ 373


>gi|261314499|ref|ZP_05953696.1| cationic amino acid ABC transporter [Brucella pinnipedialis
           M163/99/10]
 gi|261303525|gb|EEY07022.1| cationic amino acid ABC transporter [Brucella pinnipedialis
           M163/99/10]
          Length = 247

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 138/248 (55%), Positives = 183/248 (73%), Gaps = 3/248 (1%)

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIM--HKKKGISSVSQLSGASICVQAGT 154
           +D+L RNT WT+ R+ SLGL F  I Y+DGQGF++   K  GI+S  QLSGASICVQAGT
Sbjct: 1   MDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMINSKKLAGINSALQLSGASICVQAGT 60

Query: 155 TTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEH 214
           TTEL +ADYF+A+ M+Y+P+VFE++EE +AAY + RCDAYT D S+LY ++L    P +H
Sbjct: 61  TTELNMADYFRANKMEYNPVVFEKIEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDH 120

Query: 215 VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           VILP+IISK P    + QGD  W ++V WTH A++ AEE GITQ N+ ++ K + NPD++
Sbjct: 121 VILPEIISKEPFGLTVRQGDARWADVVRWTHNALLNAEEYGITQANVEEMKK-SDNPDIK 179

Query: 275 RFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGG 334
           R LG +  + IG  LGL KDW  +II+ +GNYGE+F+RN+G+ S LKI RG NA W+KGG
Sbjct: 180 RLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGG 239

Query: 335 LMYAPPIR 342
           L Y  P+R
Sbjct: 240 LQYGIPVR 247


>gi|209546999|ref|YP_002278917.1| family 3 extracellular solute-binding protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538243|gb|ACI58177.1| extracellular solute-binding protein family 3 [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 345

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 112/318 (35%), Positives = 187/318 (58%), Gaps = 7/318 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           S+L  +K+RG L CG +    GF  +       +G DVD CRA ++A+  DP K+ ++ +
Sbjct: 27  SVLDSVKQRGVLNCGTDNTTPGFGYLNPKTSKMEGVDVDLCRATAAAVLGDPDKVNFVVV 86

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
             K RF A+Q+ Q+DI+  +T     R  +L + F P  +FDG G ++    G+ S++ L
Sbjct: 87  TDKSRFNAVQTGQVDIVYAHTSVFASRAAALAVDFLPSYFFDGGGVMVTAASGVKSINDL 146

Query: 144 SGASICVQAGTTTELTLADYFKAHN-MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALY 202
           SGA+IC   G+ +E TLA   KA N      + F+  E++ +A  + RC+    D SAL 
Sbjct: 147 SGATICTTQGSGSEATLAQEVKARNLTNTKILTFDTSEKLFSALTSGRCNGMYTDKSALA 206

Query: 203 ALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNIN 262
           A +  + + +++VILP+ ++ +P A  I+Q D EW  +++WT YA+  AEE GIT  N++
Sbjct: 207 AWRGNSQKSADYVILPETLAVAPFAGIIVQNDPEWRKLMTWTLYALFQAEEWGITSANLS 266

Query: 263 QVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKI 322
           ++ K + +P +Q+FLG++     G    ++  +   +I+ +GNYGE++DR+LG ++ L +
Sbjct: 267 EMQK-SADPAIQKFLGVN--GGFGADFHVSDSFIADMIKGVGNYGEIYDRSLGPKTPLYL 323

Query: 323 PRGY--NALWSKGGLMYA 338
            R    NAL   GGL+Y+
Sbjct: 324 ERDKTSNALSKNGGLLYS 341


>gi|144897558|emb|CAM74422.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 335

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 115/340 (33%), Positives = 175/340 (51%), Gaps = 12/340 (3%)

Query: 4   DFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDF 63
            F  ++L  +     + +    +L  +  RG + CG++    GF      G   G +VD 
Sbjct: 7   SFMTAMLFALSAPAPTPALAGQVLDRVLTRGKVVCGVDQT-PGFGGFDDRGVPVGLEVDL 65

Query: 64  CRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITY 123
           CRA+++AI  +P  IQ   +  K +F AL   ++D+    T WT  R+ ++  +F  I +
Sbjct: 66  CRAIAAAILKNPQAIQVQRVTTKYKFHALAEGELDVAFGMTTWTFDRDTTMMASFPAIAF 125

Query: 124 FDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEID 183
           +DGQGF+        +    + ++ICVQ+GTT+   LA+Y          +     EE  
Sbjct: 126 YDGQGFMKWAD---IADPWAATSTICVQSGTTSANNLAEYLSRRKSAAKVLALSSSEEKF 182

Query: 184 AAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
           +A+   RC A TGD + L   K   +      V+L  IIS+ PL PAI   D EW++IV 
Sbjct: 183 SAFAERRCTAVTGDSTELAVQKNRRSATQPSWVLLETIISREPLGPAIFNNDPEWFSIVR 242

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           W+    + AE  G+ + N+  V     + +++R LG +     G  L L + W  RII  
Sbjct: 243 WSMLIPIIAEARGLGRYNLESVPAT--DAELRRLLGEEP--GFGANLRLDQAWARRIIAS 298

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGE+F RNL   + L I RG NALWS+GGL+YAPP+R
Sbjct: 299 VGNYGEIFARNL---APLGIVRGQNALWSEGGLLYAPPLR 335


>gi|67923106|ref|ZP_00516597.1| Hemolysin-type calcium-binding region:Bacterial extracellular
           solute-binding protein, family 3 [Crocosphaera watsonii
           WH 8501]
 gi|67855059|gb|EAM50327.1| Hemolysin-type calcium-binding region:Bacterial extracellular
           solute-binding protein, family 3 [Crocosphaera watsonii
           WH 8501]
          Length = 712

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 108/325 (33%), Positives = 177/325 (54%), Gaps = 14/325 (4%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL-PL 83
            +L +IK RG LK GIN    GF+    NG + GFDVD  +A++ A+F+D +KI+++   
Sbjct: 211 DLLQEIKDRGILKLGINGQKPGFSFPDENGSYIGFDVDLGKAIAVAVFNDSNKIEFVERE 270

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
           +       + +  +D+ +      L+R+   G+ F     + GQGF++ K  GI +++ L
Sbjct: 271 DRVTWLTNVANGVVDVTAAQVTQNLVRDGKAGVDFISPYLYTGQGFLVRKDSGILNLATL 330

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           +G  + + +GTT E  L D  K +   + P+ ++ ++E+ A Y     DA   D+  L  
Sbjct: 331 NGHEVGLFSGTTAEQNLQDAMKEYGGTFIPVYYDNLDEMLAGYAQGDIDAIINDLPLLGG 390

Query: 204 LKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQ 263
           L  T   P EH++L D+ISK PL+  + +  ++W + VSW  Y ++ AEE GITQ NI+Q
Sbjct: 391 LIDTFSNPDEHLLLDDVISKEPLSMVVDENQSDWKDAVSWVQYGLLQAEEYGITQDNIDQ 450

Query: 264 VSKDTTNPD--------VQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
           +  D T+ +         + FLGI+   N GE LGL  D+   +I+ +GNYGE+++R+  
Sbjct: 451 ILADNTDSNPDNDSDISTRIFLGIE--GNAGELLGLENDYMVNVIKAVGNYGEIYERHFD 508

Query: 316 NQSELKIPRGYNALWSKGGLMYAPP 340
           +     +PR +N L    GL    P
Sbjct: 509 SD---ILPRDFNQLSGDFGLQIPYP 530



 Score =  178 bits (452), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 15/200 (7%)

Query: 150 VQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           +  G+T    L     ++ +++ P  +E    + A Y A   DA + D S +Y    T  
Sbjct: 1   MIEGSTALTNLEILLSSNGVEFEPRFYESTSAMFADYDAGNIDALSTDRSLIYGRLDTLS 60

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK--- 266
            P  H IL    S  P+A  + + D++W N+V W   A + AEELG+   NI Q+     
Sbjct: 61  EPDAHHILDVEFSSEPIAMVLPEDDSQWNNVVKWVINATIEAEELGLNSDNIEQILAVNK 120

Query: 267 -----DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
                + ++P ++RFLGI+    +GEALGL  D+ Y I++ +GNY E++DR+  +     
Sbjct: 121 DENPNNDSDPAIRRFLGIESQ--LGEALGLPNDFAYNIVKLVGNYDEIYDRHFPD----- 173

Query: 322 IPRGYNALWSKGGLMYAPPI 341
           + R  N L+S GGL+Y+PP 
Sbjct: 174 LERDRNLLYSDGGLLYSPPF 193


>gi|218672485|ref|ZP_03522154.1| general L-amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli GR56]
          Length = 219

 Score =  255 bits (652), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 129/220 (58%), Positives = 176/220 (80%), Gaps = 1/220 (0%)

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+DGQGF++ K   + S  +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++E+
Sbjct: 1   YYDGQGFMVRKSLNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLDEV 60

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
           +AAY A RCD YT D S LY+L+LT   P EH ILP+IISK PL PA+ QGD +W++IVS
Sbjct: 61  NAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHAILPEIISKEPLGPAVRQGDDQWFDIVS 120

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           W  YA++ AEE GITQ N++ + K++ NPD++RFLG++  + IG  LGLT +W Y II++
Sbjct: 121 WVGYALINAEEFGITQANVDDM-KNSPNPDIKRFLGVEADTKIGTDLGLTNEWAYNIIKN 179

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGE+F+RN+G  S+LKI RG NALW+KGG+ YAPP+R
Sbjct: 180 VGNYGEVFERNVGQGSQLKIARGLNALWNKGGIQYAPPVR 219


>gi|282899859|ref|ZP_06307820.1| hypothetical protein CRC_01252 [Cylindrospermopsis raciborskii
            CS-505]
 gi|281195129|gb|EFA70065.1| hypothetical protein CRC_01252 [Cylindrospermopsis raciborskii
            CS-505]
          Length = 9381

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 104/329 (31%), Positives = 171/329 (51%), Gaps = 17/329 (5%)

Query: 25   SILGDIKKRGFLKCG----INTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
            ++L +I+ RGF+K G      +G  GFAE+ + G +KGFDVD  +A+++A+F DPSK++Y
Sbjct: 8644 NLLAEIQNRGFIKYGLPQITGSGFPGFAEIDSQGQYKGFDVDLSKAIAAAVFGDPSKVEY 8703

Query: 81   LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
                    F    +  +D+ +      L+R+  LG+ + P+    GQG +  K  GI+ +
Sbjct: 8704 TQQAFANSFANTANGLVDVSAAGYTGNLMRDAGLGVDYSPVYIHTGQGILTRKDSGITGI 8763

Query: 141  SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
            + L+G++I      T    L+D  K          F+   ++ AAY     DA   D + 
Sbjct: 8764 ATLNGSTIGALTTVTAIENLSDLTKKFGSTIIITPFDDKNKMYAAYEKGEIDAVYNDKTL 8823

Query: 201  LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
            L  +  T   P  H ILP+  SK PL   + +  ++W ++V W   ++V AEE GIT  N
Sbjct: 8824 LAGIIPTLSDPQAHEILPETFSKEPLTLILDENQSDWADVVRWVMNSLVQAEEYGITSTN 8883

Query: 261  INQVSKDTTN--------PDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDR 312
            I+ +     +         ++Q FLG+    N G +LGL+ D+  ++I+ +GNYGE++ R
Sbjct: 8884 IDDIIAKNRDNDPNNNSIKEIQAFLGL--QGNPGASLGLSSDFVVKMIKAVGNYGEIYAR 8941

Query: 313  NLGNQSELKIPRGYNALWSKGGLMYAPPI 341
            N    + + +PR  N L+   GL YA P+
Sbjct: 8942 NF--DTNI-LPREKNDLYHFSGLQYALPL 8967



 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 93/339 (27%), Positives = 169/339 (49%), Gaps = 29/339 (8%)

Query: 16   FFTSFSTNASILGDIKKRGFLKC-GINTGLVGFAEVKANGDWKG-FDVDFCRALSSAIFD 73
              T+ +   ++L +I++RG+++  G  +               G FD  F RA+++AIF 
Sbjct: 8306 TVTTSANPDNLLAEIQQRGYIRFSGGRSDS-----------ISGVFDYQFVRAIAAAIFG 8354

Query: 74   DPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK 133
            D +++  +P    E F  + +KQ+D+ +R+    L+R+  L + F P+ Y+D    ++  
Sbjct: 8355 DANRVDQVPGTFSESFSQVANKQVDLSTRHITQNLVRDGELNVDFGPVYYYDFLSVLVRN 8414

Query: 134  KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
            K GI     L+G  I V   TT    L +   +  +++   VF+   ++ AAY     DA
Sbjct: 8415 KSGIQGAKDLNGKKIGVVKNTTALTNLDNLLDSIGVQFTAEVFDTQNDLYAAYNLGEVDA 8474

Query: 194  YTGDISALYAL--KLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251
               D   +Y    +   +   EH  L    SK P+   I + ++EW ++V W  Y  + A
Sbjct: 8475 IASDKGIIYDALEREILENKQEHRFLDIQFSKEPIGLVIPENESEWGDVVRWVVYTTIQA 8534

Query: 252  EELGITQKNINQVS--------KDTTNPDVQRFLGIDK-SSNIGEALGLTKDWTYRIIRH 302
            EE GI  +NI+++         K+ ++P ++RFLG++    ++G AL L +D+  ++I+ 
Sbjct: 8535 EEYGINSQNIDRLLADNTDDNSKNDSDPAIRRFLGLEGLEGSLGSALELPQDFVVQVIKQ 8594

Query: 303  MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
            +GNYGE++ R+  +     + R  N L   GGL+ + P 
Sbjct: 8595 VGNYGEIYQRSFPS-----LTRDLNLLSLTGGLLESLPF 8628


>gi|288962134|ref|YP_003452429.1| ABC transporter amino-acid binding protein [Azospirillum sp. B510]
 gi|288914400|dbj|BAI75885.1| ABC transporter amino-acid binding protein [Azospirillum sp. B510]
          Length = 352

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 105/332 (31%), Positives = 169/332 (50%), Gaps = 8/332 (2%)

Query: 14  ILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD 73
            L   +++ +   L  I  RGFL CG+ +G+ G +     G   GF VD CR  ++A   
Sbjct: 26  ALTSPAWAGDGDTLERIHGRGFLICGLRSGVSGISFSDPQGHLDGFLVDVCRVFAAATLG 85

Query: 74  DPSKIQYLPL-NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
           +   I+ + L    + F A++  ++D+    T WT  R++S  + F      DGQGF +H
Sbjct: 86  NAQAIRVVRLPEKPQEFQAVEKHEVDVALTTTTWTFSRDLSNDIEFLMPLLHDGQGFAIH 145

Query: 133 KKKGISSVSQLSGA-SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRC 191
                       G  ++CV+  TTT   L D+ +  ++ +    F+ ++E   A+ AH C
Sbjct: 146 SDGTPPPPLDRLGPRTVCVKTATTTVRNLEDHIRKSDLPWTMRTFQTLDEALQAFLAHEC 205

Query: 192 DAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250
           D  T D + L        +    + + PD+IS+ PL P I +GD  WY++  W  +A+V 
Sbjct: 206 DLLTTDRTVLVTSLAGYRKAGMGIYIYPDVISREPLTPYIARGDRNWYDVTRWILHAIVL 265

Query: 251 AEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMF 310
           A+  G+T  ++ Q  +   +P++ R LG   S N    LGL  DW  + +  +GNYGE+F
Sbjct: 266 ADARGVTSADV-QAGRVPDDPELHRMLG--HSGNAARMLGLPDDWALQALAQVGNYGEIF 322

Query: 311 DRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +RNLG      + RG N  W++GGL+Y+PP R
Sbjct: 323 ERNLGI--PYGMDRGPNKPWTQGGLLYSPPFR 352


>gi|117925598|ref|YP_866215.1| extracellular solute-binding protein [Magnetococcus sp. MC-1]
 gi|117609354|gb|ABK44809.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Magnetococcus sp. MC-1]
          Length = 360

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 113/348 (32%), Positives = 185/348 (53%), Gaps = 10/348 (2%)

Query: 3   KDFFVSILCLIILFFTS-------FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           +   V +  L I  +          ++  S +  IK RG L+CG+    +  + +  +G+
Sbjct: 15  RKLGVVLALLWIACWLPQAGWCGEAASLGSTVQGIKDRGVLRCGVEQNTLTMSAMDRDGE 74

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
           W+GF VD C AL  A+      ++ + +N   R+ AL+    D+L  N+ WTL RE +LG
Sbjct: 75  WRGFMVDLCHALGVALLGTTQDVEIIEVNKHLRYEALKGNAYDVLMSNSTWTLTRETALG 134

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F     FDGQGF+ H K+G + +S    A+ICV   TT+   L      H   +    
Sbjct: 135 VRFVTPYLFDGQGFLAHLKQGRTRLSAYDKANICVLDSTTSLTNLKALLAQHYPHFTLTS 194

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPLAPAIIQGD 234
           F  +E +  ++ +  CD  + D   L + +L        + IL DIIS+ PL P + QGD
Sbjct: 195 FVTLERMRESFFSGNCDMLSSDRLVLASEQLVRGGEQGAYHILEDIISREPLGPYVRQGD 254

Query: 235 TEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKD 294
            +W++++ W    ++ AE  G+T+ N+++++  T + ++Q  LG+    N  +ALG+   
Sbjct: 255 EQWFSLLRWLVQGLLLAEHKGVTRDNVDKLAGTTEDREIQHLLGV--VGNAHQALGVDAQ 312

Query: 295 WTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           W  R+IR +GN+ E++ RNLG  ++L + RGYN LW KGGL Y PP +
Sbjct: 313 WMRRVIRVVGNFEEIYQRNLGALAQLGVRRGYNGLWYKGGLHYVPPFQ 360


>gi|256376161|ref|YP_003099821.1| extracellular solute-binding protein family 3 [Actinosynnema mirum
           DSM 43827]
 gi|255920464|gb|ACU35975.1| extracellular solute-binding protein family 3 [Actinosynnema mirum
           DSM 43827]
          Length = 319

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 99/325 (30%), Positives = 169/325 (52%), Gaps = 7/325 (2%)

Query: 17  FTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS 76
            T+ ++ +  +  I++RG L+ G++TG+ G +     G  +G DVD  RA+++A+F +P 
Sbjct: 1   MTTSASLSPTVSAIRRRGHLRLGVSTGIRGLSWTDDAGVRRGLDVDTGRAVAAALFGEPG 60

Query: 77  KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136
           +I+Y  ++ ++R  A+ S  +D+L+ N  WT  RE    +AF   T +D    ++ +  G
Sbjct: 61  RIEYTEIDPEDRIRAVTSDAVDLLACNATWTFSRECDANVAFVLTTCYDEGAILVRRDSG 120

Query: 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196
           I+S   L G ++ +  GT++E  L  +F       H   +       AAY +     Y  
Sbjct: 121 IASADDLDGHTLGMCEGTSSEEALRAWFGPRGRAVHCKHYASPAAALAAYASGEVTGYVA 180

Query: 197 DISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGI 256
           D   +   +     PS+HV+LP+ +S  P+ P +   D +W     W  +A++ AE  G+
Sbjct: 181 DGVVVAGERTRLATPSDHVVLPERVSVEPMGPVVKDDDPQWVKTARWVFFALIAAEAAGV 240

Query: 257 TQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGN 316
           T   +   + +           +   S +    GL   W   ++  +GNYGE+++RNLG+
Sbjct: 241 TSHQVRAGTAEDPPL-------LKDQSRLAAKAGLHPRWISAVVGEVGNYGEIYERNLGD 293

Query: 317 QSELKIPRGYNALWSKGGLMYAPPI 341
            S L+IPRGYN LW +GGLMYAPP+
Sbjct: 294 ASGLRIPRGYNELWLRGGLMYAPPL 318


>gi|197104926|ref|YP_002130303.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Phenylobacterium zucineum
           HLK1]
 gi|196478346|gb|ACG77874.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Phenylobacterium zucineum
           HLK1]
          Length = 310

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 105/311 (33%), Positives = 175/311 (56%), Gaps = 6/311 (1%)

Query: 31  KKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFL 90
           K R ++ CG + G+ G +     G W+GFDVD CRA ++A+  D  KI+++PLNA +R  
Sbjct: 2   KGRDYVTCGASQGITGLSRPDERGVWRGFDVDVCRAFAAALLGDAQKIRFIPLNAAQRLP 61

Query: 91  ALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICV 150
           ALQ+ +ID+LSR T  T  R+  + + F  +T FD    I  K+ G +S + L+G ++C+
Sbjct: 62  ALQTGEIDVLSRTTTMTFTRD--MAVRFVTVTQFDTDVLIFRKRLGAASPADLNGRTVCL 119

Query: 151 QAGTTTELT-LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTND 209
           Q+G ++    L        +++  + F+       AY + RCD Y  D     +   T  
Sbjct: 120 QSGGSSADNTLTRVEAEAKIRFERVYFDSTITARDAYFSARCDVYVTDGFLGASQVATVA 179

Query: 210 RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTT 269
           R  +   L  +    P   AI +GD  W+++V WT   ++ AE+ G+TQ N++++ + + 
Sbjct: 180 RDPDDHALLYLDHLLPQGVAIARGDDRWFDVVRWTVNLLIWAEQNGVTQANVDELRR-SG 238

Query: 270 NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNAL 329
             DV+R LG D +   G A+GL  DW Y++++ +GNYGE+++RNLG ++ +K  R  N  
Sbjct: 239 PADVRRVLGADPA--FGRAIGLEPDWGYQVLKQVGNYGEIWERNLGARTRIKADRRLNRP 296

Query: 330 WSKGGLMYAPP 340
           +  GGL++  P
Sbjct: 297 YKDGGLLFPYP 307


>gi|288962967|ref|YP_003453261.1| general L-amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
 gi|288915233|dbj|BAI76717.1| general L-amino acid transport system substrate-binding protein
           [Azospirillum sp. B510]
          Length = 353

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 96/327 (29%), Positives = 162/327 (49%), Gaps = 6/327 (1%)

Query: 18  TSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSK 77
           ++ +T+  +L +I++RG ++CG++    GFA     G   GF VD CRAL++A+      
Sbjct: 31  SARATDRPVLAEIERRGVVRCGVSFN-PGFAANDDGGRPVGFMVDLCRALAAAVLGKADA 89

Query: 78  IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGI 137
           I+   L+  + F A+ + ++D+    T WTL R+++  + F P  ++D QG    +    
Sbjct: 90  IEIRRLSKPQEFDAVAAGEVDVSFAQTSWTLTRDVTHAVDFGPPVFYDVQGIAAWRLPDG 149

Query: 138 SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD 197
            S       ++C+ AGTTT+  +          +    F    +   A+ +  C A   D
Sbjct: 150 GSALDGGELTVCMPAGTTTQAEMESLIAGGKRPWKLRSFPGWPDALEAFLSRDCAALGAD 209

Query: 198 ISALYALKLTNDRPSEHVILPD--IISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            + L         P + + + D  + S+ PLAP     D  W   V WT +A+  A++ G
Sbjct: 210 RAQLTTALHMLGLPPDSLEITDAPLASREPLAPMTPNSDRNWMAAVRWTMFALFLADDAG 269

Query: 256 ITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLG 315
           ++  N N   + T   +++R L       +    GL  DW Y+ +  +GNYGE+FDRNLG
Sbjct: 270 VSGANAN-FQRITGGSEMRRLL--SGIPEVAAKAGLRPDWAYQAVVQVGNYGEIFDRNLG 326

Query: 316 NQSELKIPRGYNALWSKGGLMYAPPIR 342
            +S  K+ RG N  W++GGL+YAP  +
Sbjct: 327 ARSPFKLERGLNRPWTQGGLLYAPVFQ 353


>gi|330899538|gb|EGH30957.1| extracellular solute-binding protein [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 218

 Score =  242 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 109/220 (49%), Positives = 153/220 (69%), Gaps = 2/220 (0%)

Query: 123 YFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEI 182
           Y+DG GF+++ K G++S  +L GA+IC+QAGTTTEL ++DYF+++ +KY PI F+  +E 
Sbjct: 1   YYDGIGFLVNNKLGVNSAKELDGATICIQAGTTTELNVSDYFRSNGLKYTPITFDTSDES 60

Query: 183 DAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
             +    RCD  T D S LYA +    +P ++++LP++ISK PL P + +GD EW++IV 
Sbjct: 61  AKSLEGGRCDVLTSDQSQLYAQRSKLAKPDDYIVLPEVISKEPLGPVVRKGDEEWFSIVR 120

Query: 243 WTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRH 302
           WT +AM+ AEE  IT KN+   +K T NPDV R LG D     G+ L L KDW  +I++ 
Sbjct: 121 WTLFAMLNAEEAKITSKNVEAEAKSTKNPDVARMLGAD--GTYGQDLKLPKDWVVQIVKQ 178

Query: 303 MGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           +GNYGE+F+RNLG  + LKI RG NALW+ GG+ YAPPIR
Sbjct: 179 VGNYGEVFERNLGEGTPLKIKRGQNALWNAGGIQYAPPIR 218


>gi|254464335|ref|ZP_05077746.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Rhodobacterales bacterium Y4I]
 gi|206685243|gb|EDZ45725.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Rhodobacterales bacterium Y4I]
          Length = 333

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 106/345 (30%), Positives = 177/345 (51%), Gaps = 19/345 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +  F+S L L +    +    A        I+ RG+L CG+ +  +GFA ++ +G+W 
Sbjct: 1   MMR--FLSALTLGLWLAGALGAEAGEGDTGAAIRDRGYLLCGVGSDDLGFATLRYDGEWT 58

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVDFCRA+++A+  D + ++++PL++  R   L   ++D+L R T +T  R+++  L 
Sbjct: 59  GFDVDFCRAVAAAMLGDATAVEFVPLDSLNRLEVLARGEVDVLFRTTTFTFDRDVNAALE 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F  IT++D Q  +++   G  +++ L+G ++C  +GTT+   +     +         + 
Sbjct: 119 FPAITFYDSQKVLVYADTGARTLADLAGKTVCANSGTTSITNIRHRIDSLGGGIGIQEYA 178

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTE 236
                  A+    C+A T D S L A+  +      + V+L D I+  PL P + + D +
Sbjct: 179 SQAGRWRAFFGRECEAVTADGSDLAAMLASRPGYRDDFVLLEDEIANEPLGPVVREDDRQ 238

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296
           W  IV W     + AE  GI Q         +   ++ R          G  LG+   W 
Sbjct: 239 WEQIVRWVINLTLVAEAAGIGQ--------TSGPAEIARL-----PLPAGADLGVAGTWG 285

Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
             +IR +GNY ++F RNLG+ SEL++ RG NALW+ GGLMY  P+
Sbjct: 286 ADVIRQVGNYDDIFSRNLGDGSELRMARGRNALWTDGGLMYPLPM 330


>gi|56697219|ref|YP_167584.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Ruegeria pomeroyi DSS-3]
 gi|56678956|gb|AAV95622.1| amino acid ABC transporter, periplasmic amino acid-binding protein
           [Ruegeria pomeroyi DSS-3]
          Length = 333

 Score =  239 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 108/345 (31%), Positives = 177/345 (51%), Gaps = 19/345 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA---SILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M +  F   L L +    + S  A        I+ RG+L CG+ +  +GFA ++ +G+W 
Sbjct: 1   MMR--FRGALTLGLWLAGALSAQAGEGDTGAAIRDRGYLLCGVGSDDLGFATLRFDGEWT 58

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           GFDVDFCRA+++A+  D + ++++PL++  R   L   ++D+L R T +T  R+++  L 
Sbjct: 59  GFDVDFCRAVAAAMLGDATAVEFVPLDSLNRLEVLARGEVDVLFRTTTFTFDRDVNAALE 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F  ITY+D Q  +++   G  ++S L+G ++C  +GTT+   +     +         + 
Sbjct: 119 FPAITYYDSQKVLVYADTGARTLSDLAGKTVCANSGTTSITNIRHRIDSLGGGIGIQEYA 178

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPS-EHVILPDIISKSPLAPAIIQGDTE 236
                  A+    C+A T D S L A+  +      + V+L D I+  PL P + + D +
Sbjct: 179 SQAGRWRAFFGRECEAVTADGSDLAAMMASRPGYRDDFVLLEDEIANEPLGPVVREDDRQ 238

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWT 296
           W  IV W     + AE  GI Q         +   ++ R      +   G  LG+   W 
Sbjct: 239 WEQIVRWVINLTLVAETAGIGQV--------SDPEEIARL-----ALPAGADLGVVDTWG 285

Query: 297 YRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
             +IR +GNY ++F RNLG+ SEL++ RG NALW+ GGLMY  P+
Sbjct: 286 AEVIRQVGNYDDIFRRNLGDGSELRMERGRNALWTDGGLMYPLPM 330


>gi|224367657|ref|YP_002601820.1| AapJ2 [Desulfobacterium autotrophicum HRM2]
 gi|223690373|gb|ACN13656.1| AapJ2 [Desulfobacterium autotrophicum HRM2]
          Length = 219

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 108/222 (48%), Positives = 153/222 (68%), Gaps = 3/222 (1%)

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
           + Y+DGQGF++ KK G+    +L GA++CV  GTTTE  +ADYF+A+ MK +P+V E   
Sbjct: 1   MNYYDGQGFLISKKLGVKDAKELDGATVCVLPGTTTEQNVADYFRANGMKMNPVVIENTA 60

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E+  A+ A RCD  T D S L   +     P +++ILP IISK PLAPA+  GD +W ++
Sbjct: 61  ELAKAFFAGRCDCLTSDASQLAGTRAVAPNPDDYIILPTIISKEPLAPAVRHGDNKWKDV 120

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V+++  AM+ AEELGIT KN+++  K +T+P VQRFLG+      G+ALGL + + Y I+
Sbjct: 121 VNYSVLAMINAEELGITSKNVDEKLK-STDPKVQRFLGVSP--GNGKALGLDEKFAYNIV 177

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           + +GNYGEMF+RN+G  + LKI RG NALW+ GGLMY+ P +
Sbjct: 178 KQVGNYGEMFERNVGMDTPLKIERGLNALWTNGGLMYSAPFK 219


>gi|119488696|ref|ZP_01621705.1| extracellular solute-binding protein, family 3 [Lyngbya sp. PCC
           8106]
 gi|119455119|gb|EAW36260.1| extracellular solute-binding protein, family 3 [Lyngbya sp. PCC
           8106]
          Length = 607

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 98/320 (30%), Positives = 175/320 (54%), Gaps = 11/320 (3%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYL-PL 83
           ++L ++  RGF++ G+     G    + NG+  GFDVD  RAL++++F DP+ ++++   
Sbjct: 295 NVLQEVLDRGFVRVGVRNDAQGLGFAEENGNLTGFDVDLGRALAASLFGDPNAVEFVIQT 354

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL 143
              +RF  + +  +D+ SRN    L R+  LG+ F PI  +D Q  +     GI+++ QL
Sbjct: 355 TGSQRFSDVANGVVDVTSRNATHNLRRDALLGVDFAPINTYDAQFVVTPTASGITTLEQL 414

Query: 144 SGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYA 203
           +G  I V AGTT+E  L +   A  +    +  +  + I  +Y     DA TGD   + +
Sbjct: 415 AGGRIGVSAGTTSETRLQEKLSAAGINAEVVALDNFQTIFDSYINGELDAITGDGGLIIS 474

Query: 204 LKLTND--RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNI 261
             LT    + S+H   P+++ + PLA  + +  ++W ++VS   YA+  A ELG+T +N+
Sbjct: 475 SLLTLPVEQRSQHQPFPEVLGEEPLAMVVDENQSQWKDVVSGVTYAVTEALELGLTSENV 534

Query: 262 NQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELK 321
               + ++NP ++RFLG++   N+GE+LGL  D+    I  +GNY EM +RN      ++
Sbjct: 535 TAELE-SSNPVIRRFLGVE--GNVGESLGLPNDFALNAISAVGNYREMTERNF---PGIE 588

Query: 322 IPRGYNALWSKGGLMYAPPI 341
           +       +++GG +++ P 
Sbjct: 589 LEGIL--PYTEGGTLFSVPF 606



 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 91/283 (32%), Positives = 158/283 (55%), Gaps = 9/283 (3%)

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D+ RAL++A+FD+P+ ++++ + A E F ++ S  +DI +     ++LR+ +LG+ F P
Sbjct: 3   IDYSRALATALFDNPNSVEFVVVEAGEDFNSVASGTVDIAATLPTHSVLRDATLGVDFSP 62

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +FD QG ++    GI+SV QL   ++ V AGT ++  L D  +   +  +   F   +
Sbjct: 63  TVFFDTQGVLVRGDSGINSVEQLQETTVGVLAGTRSQQNLEDAAQRAGITLNIQTFPSQD 122

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           ++ AAY A    + + +   L     T   P   VIL + I K PLA  + + ++E+ ++
Sbjct: 123 DLFAAYDAGEIGSVSINRGVLSNRIPTLSNPGNQVILEENIGKEPLAFIVPENESEFADV 182

Query: 241 VSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRII 300
           V W   A + AE  GI  +N+N+     ++  ++RFLG+  S N+GE+LG+  D+   II
Sbjct: 183 VRWVVNAPIQAEFFGINSQNVNEFLDGNSD--IKRFLGV--SGNLGESLGIDNDFALNII 238

Query: 301 RHMGNYGEMFDRNLGNQSELKIPRGYNAL--WSKGGLMYAPPI 341
           + +GNY E+++RN    +   +PR  N L     GGL+Y PP 
Sbjct: 239 QQVGNYEEIYNRNFDETA---LPRNLNELMFVEPGGLVYYPPF 278


>gi|254230451|ref|ZP_04923829.1| hypothetical protein VEx25_B0035 [Vibrio sp. Ex25]
 gi|151937022|gb|EDN55902.1| hypothetical protein VEx25_B0035 [Vibrio sp. Ex25]
          Length = 222

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 114/225 (50%), Positives = 153/225 (68%), Gaps = 3/225 (1%)

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F  + Y+DGQGF++ K  GISS  +L GAS+CVQ+GTTTEL LADYF+   M Y P+VF+
Sbjct: 1   FVGVNYYDGQGFMVKKDLGISSAKELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFD 60

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +    + A RCD  T D S LYAL+L    PS   +LP+IISK PL P + QGD +W
Sbjct: 61  TAAQTSKGFDAGRCDVLTTDQSGLYALRLNLKDPSSAAVLPEIISKEPLGPVVRQGDDQW 120

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTY 297
           +NI  WT  AM+ AEE GI+ KN +++ K + +P+++R LG+D     G+ LG+  DW Y
Sbjct: 121 FNIAKWTLSAMINAEEYGISSKNADEMLK-SKDPNIKRILGVD--GPKGKGLGIRDDWGY 177

Query: 298 RIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           ++I+ +GNYGE F+R +G  S L+I RG NALW+ GG MYAPPIR
Sbjct: 178 QVIKQVGNYGESFERTVGTGSPLEISRGVNALWNAGGFMYAPPIR 222


>gi|327395693|dbj|BAK13115.1| general L-amino acid-binding periplasmic protein AapJ precursor
           [Pantoea ananatis AJ13355]
          Length = 323

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 108/319 (33%), Positives = 164/319 (51%), Gaps = 7/319 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           +++  I++   L  G++ G  G ++    N  W GFD+D  RA++ ++  D  KI ++PL
Sbjct: 5   AVIKRIEQHDVLNVGVSLGFKGLSQRDPLNNSWNGFDIDLARAVAISVLGDGGKIHFIPL 64

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ- 142
            + +RF AL+   ID+ + N   T  RE   G+ F     FDG+  +  +        Q 
Sbjct: 65  QSADRFQALRDGVIDLGTFNASVTFQREAEYGINFLHPMLFDGEVLMTPRSNLTEETPQA 124

Query: 143 --LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
                  I    G+TTE  L  YF   N+    ++F+  ++   AY +  CD Y  D   
Sbjct: 125 RFTRQRRIAAMRGSTTEENLTRYFDELNLPCEILLFDSPQQARQAYESGECDIYCLDGYL 184

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
           L          S+H+IL D IS   +APA+   D++WY    W   A++ AE LGITQKN
Sbjct: 185 LAGEHHQLTDSSQHLILDDRISLEAMAPAVSASDSQWYIATKWVMRALIEAENLGITQKN 244

Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320
           I + S +     ++ FL  D   N+   LGL  D+   IIR +GNYGE+F+RNLG  SEL
Sbjct: 245 ILEKSDNPEGY-LKTFLYPDV--NLCSQLGLQPDFIREIIRKIGNYGEIFERNLGKNSEL 301

Query: 321 KIPRGYNALWSKGGLMYAP 339
           K  R  N  W++GG++++P
Sbjct: 302 KQQRRDNKPWAEGGMLWSP 320


>gi|300721866|ref|YP_003711144.1| putative Amino-acid binding protein [Xenorhabdus nematophila ATCC
           19061]
 gi|297628361|emb|CBJ88926.1| putative Amino-acid binding protein [Xenorhabdus nematophila ATCC
           19061]
          Length = 323

 Score =  228 bits (582), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 105/320 (32%), Positives = 170/320 (53%), Gaps = 7/320 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           ++++  IK    L  G++ G  G +     N  W+GFD+D  +A++ A+  +  KI ++P
Sbjct: 4   SAVIQRIKTHNILNAGVSLGFRGLSFRDNYNSQWEGFDIDLAKAVAIAVLGNSKKINFIP 63

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
           L +  RF AL+   ID+   N+  T   E    ++F     FDG+  + H+   I++VS+
Sbjct: 64  LQSGNRFQALKDNIIDLGCFNSSITFQSESEYNVSFAHPMLFDGEVLMTHENNLINNVSE 123

Query: 143 LSGAS---ICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
                   I    G+TT+  L  YF    +  + ++FE  ++   AY+   C+ Y  D  
Sbjct: 124 ARSTKKREIAAMRGSTTQENLERYFAELGLNCNIMLFESPQDAREAYQKGICNIYCLDSY 183

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQK 259
            L   ++  + P +H+ L D IS   ++PA+   D +W+  VSW   A++ AE LGIT+ 
Sbjct: 184 LLAGERIQLEAPEKHLFLKDRISLEAMSPAVSLHDPQWHASVSWIMKALIEAENLGITRN 243

Query: 260 NINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSE 319
           N+N     +T   + +FL    S  +   LGL  ++TY+IIR +GNYGE+F+RNLG  S 
Sbjct: 244 NVNDKYNISTGY-INKFL--KPSEELCNNLGLQTEFTYKIIRELGNYGEIFERNLGKSSI 300

Query: 320 LKIPRGYNALWSKGGLMYAP 339
           L   R  N  WSKGG++Y+P
Sbjct: 301 LNQERKDNKPWSKGGMLYSP 320


>gi|291619370|ref|YP_003522112.1| AapJ [Pantoea ananatis LMG 20103]
 gi|291154400|gb|ADD78984.1| AapJ [Pantoea ananatis LMG 20103]
          Length = 323

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 106/319 (33%), Positives = 162/319 (50%), Gaps = 7/319 (2%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPL 83
           +++  I++   L  G++ G  G ++    N  W GFD+D  RA++ ++  D  KI ++PL
Sbjct: 5   AVIKRIEQHDVLNVGVSLGFKGLSQRDPLNNSWNGFDIDLARAVAISVLGDGGKIHFIPL 64

Query: 84  NAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ- 142
            + +RF AL+   ID+ + N   T  RE   G+ F     FDG+  +  +        Q 
Sbjct: 65  QSADRFQALRDGVIDLGTFNASVTFQREAEYGINFLHPMLFDGEVLMTPRSNLTEETPQA 124

Query: 143 --LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
                  I    G+TTE  L  YF   N+    ++F+  ++   AY +  CD Y  D   
Sbjct: 125 RFTRQRRIAAMRGSTTEENLTRYFDELNLPCEILLFDSPQQARQAYESGECDIYCLDGYL 184

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
           L          S+H+IL D IS   +APA+   D++WY    W   A++ AE LGITQK 
Sbjct: 185 LAGEHHQLTDSSQHLILDDRISLEAMAPAVSASDSQWYIATKWVMRALIEAENLGITQKT 244

Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320
             + S +     ++ FL  D   N+   LGL  D+   IIR +GNYGE+F+RNLG  SEL
Sbjct: 245 FLEKSDNPEGY-LKTFLYPDV--NLCSQLGLQPDFIREIIRKIGNYGEIFERNLGKNSEL 301

Query: 321 KIPRGYNALWSKGGLMYAP 339
           K  R  N  W++GG++++P
Sbjct: 302 KQQRRDNKPWAEGGMLWSP 320


>gi|71735465|ref|YP_276122.1| amino-acid binding protein [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71556018|gb|AAZ35229.1| amino-acid binding protein, putative [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 317

 Score =  226 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 102/311 (32%), Positives = 167/311 (53%), Gaps = 3/311 (0%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           DIKKRG+L+ G++ GL+G +   + G+W GFDVD  RA+S AIF D   I+Y PL + +R
Sbjct: 7   DIKKRGYLRVGVSLGLIGLSSKNSEGEWSGFDVDLARAVSVAIFGDDQCIEYFPLASNDR 66

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
           F ALQ   ID+   N+  T  RE    + F     FDG+  +     G+S         +
Sbjct: 67  FDALQQNIIDLGCFNSSITFSRETISEVKFCHPMLFDGEMLMTKSAGGMSRPIVSGEIRV 126

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
               G+TT   L  YF+  N+K    +++  ++   AY    C+ Y  D   L   +   
Sbjct: 127 AALEGSTTGDNLNRYFREQNLKGVVHLYKTFDDARNAYNLDVCNYYCLDGYLLSGEQTKL 186

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
               +HVIL  +IS+  ++PA +   T+  + V+W   +++ +E +GI   N+N    + 
Sbjct: 187 RDSRDHVILEQMISREAMSPATLSSKTQLTSAVTWVLRSIIESENIGINSHNLNAF-YEL 245

Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328
            N  ++++L  D    I   LG++  +T  +++++GNY E+F+R+LG++S L+  R  N 
Sbjct: 246 ENWYIRKYLHPDP--RISSKLGISPSFTADVVKNVGNYEEIFERHLGSKSILRQTRRENR 303

Query: 329 LWSKGGLMYAP 339
           L S GGL+Y+P
Sbjct: 304 LRSVGGLLYSP 314


>gi|320327184|gb|EFW83198.1| amino-acid binding protein, putative [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 317

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 101/311 (32%), Positives = 167/311 (53%), Gaps = 3/311 (0%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           DIKKRG+L+ G++ GL+G +   + G+W GFDVD  RA+S AIF D   I+Y PL + +R
Sbjct: 7   DIKKRGYLRVGVSLGLIGLSSKNSEGEWSGFDVDLARAVSVAIFGDDQCIEYFPLASNDR 66

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
           F ALQ   ID+   N+  T  RE    + F     FDG+  +     G+S         +
Sbjct: 67  FDALQQNIIDLGCFNSSITFSRETISEVKFCHPMLFDGEMLMTKSAGGMSRPIVSGEIRV 126

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
               G+TT   L  YF+  ++K    +++  ++   AY    C+ Y  D   L   +   
Sbjct: 127 AALEGSTTGDNLNRYFREQHLKGVVHLYKTFDDARNAYNLDVCNYYCLDGYLLSGEQTKL 186

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
               +HVIL  +IS+  ++PA +   T+  + V+W   +++ +E +GI   N+N    + 
Sbjct: 187 RDSRDHVILEQMISREAMSPATLSSKTQLTSAVTWVLRSIIESENIGINSHNLNAF-YEL 245

Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328
            N  ++++L  D    I   LG++  +T  +++++GNY E+F+R+LG++S L+  R  N 
Sbjct: 246 ENWYIRKYLHPDP--RISSKLGISPSFTADVVKNVGNYEEIFERHLGSKSILRQTRRENR 303

Query: 329 LWSKGGLMYAP 339
           L S GGL+Y+P
Sbjct: 304 LRSVGGLLYSP 314


>gi|320325529|gb|EFW81591.1| amino-acid binding protein, putative [Pseudomonas syringae pv.
           glycinea str. B076]
          Length = 346

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 101/311 (32%), Positives = 166/311 (53%), Gaps = 3/311 (0%)

Query: 29  DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKER 88
           DIKKRG+L+ G++ GL+G +   + G+W GFDVD  RA+S AIF D   I+Y PL + +R
Sbjct: 36  DIKKRGYLRVGVSLGLIGLSSKNSEGEWSGFDVDLARAVSVAIFGDDQCIEYFPLASNDR 95

Query: 89  FLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASI 148
           F ALQ   ID+   N+  T  RE    + F     FDG+  +     G+S         +
Sbjct: 96  FDALQQNIIDLGCFNSSITFSRETISEVKFCHPMLFDGEMLMTKSAGGMSRPIVSGEIRV 155

Query: 149 CVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTN 208
               G+TT   L  YF+  N+K    +++  ++   AY    C+ Y  D   L   +   
Sbjct: 156 AALEGSTTGDNLNRYFREQNLKGVVHLYKTFDDARNAYNLDVCNYYCLDGYLLSGEQTKL 215

Query: 209 DRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDT 268
               +HVIL  +IS+  ++PA +    +  + V+W   +++ +E +GI   N+N    + 
Sbjct: 216 RDSRDHVILEQMISREAMSPATLSSKIQLTSAVTWVLRSIIESENIGINSHNLNAF-YEL 274

Query: 269 TNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNA 328
            N  ++++L  D    I   LG++  +T  +++++GNY E+F+R+LG++S L+  R  N 
Sbjct: 275 ENWYIRKYLHPDP--RISSKLGISPSFTADVVKNVGNYEEIFERHLGSKSILRQTRRENR 332

Query: 329 LWSKGGLMYAP 339
           L S GGL+Y+P
Sbjct: 333 LRSVGGLLYSP 343


>gi|297192982|ref|ZP_06910380.1| ABC transporter amino acid-binding protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197723387|gb|EDY67295.1| ABC transporter amino acid-binding protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 352

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 99/321 (30%), Positives = 160/321 (49%), Gaps = 19/321 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQY 80
               + L   K RG ++  ++ G+ G +     G W G D D  RA+++A  +D   I +
Sbjct: 50  PATTATLRSAKVRGAVRVAVSQGVRGLSLRTPAGRWTGLDTDIARAVAAAALEDAEAIDW 109

Query: 81  LPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSV 140
           +P+ A +R   L+S + D+   N  WT+ RE +  + F  IT +DG+GF++    G++  
Sbjct: 110 VPVRATDRLRTLESGRADLTVCNLTWTMGREATGAVLFAGITCYDGEGFLVRAADGLADP 169

Query: 141 SQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISA 200
           + L+G  + V  G TT + L  ++    ++  P+ F+   +  AAY    C AY  D +A
Sbjct: 170 ADLAGRRLAVHNGCTTVVNLESWYGPLGLEVEPVGFDDPADALAAYACGDCAAYVLDRTA 229

Query: 201 LYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKN 260
           L   +    RP +H ILP  IS+ P+A A+ + D  W+ +V W    +V AE  G     
Sbjct: 230 LAGARACLPRPQDHRILPVSISREPMAAAVHEADPHWFRLVRWVLQLLVAAEHEGPEAA- 288

Query: 261 INQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSEL 320
                         R      +   G + GL + W  R++  +G YG++++RNLG  S L
Sbjct: 289 -------------ARL-----AGPHGPSAGLDEKWADRVLSAVGTYGDVYERNLGAASGL 330

Query: 321 KIPRGYNALWSKGGLMYAPPI 341
            +PRG N LW+ GGL YA P+
Sbjct: 331 DVPRGVNELWTAGGLHYAVPL 351


>gi|193083904|gb|ACF09583.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [uncultured marine group II euryarchaeote KM3-72-G3]
          Length = 470

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 114/365 (31%), Positives = 172/365 (47%), Gaps = 38/365 (10%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73
               + +T  S L  I  RG +KCG+     G   + A  G   G D+ +CRA+++A+  
Sbjct: 107 AAGIAEATPVSTLDTIVDRGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRAVAAALGL 166

Query: 74  DPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
           +P   ++Y+P +  +RF  L S  ID+L R T WT  R+  L   F  + +FDGQG ++ 
Sbjct: 167 NPDTDVEYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVR 226

Query: 133 KKKGIS---SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
                    S  QL+ A ICV  GTTTE  + D+F + N+++  +      E  A +   
Sbjct: 227 SDAYEYGTGSADQLNNAEICVGIGTTTEGNMVDWFSSRNIQFTSVPVADAAEATAKFIDG 286

Query: 190 RCDAYTGDISALYALKLTND----------RPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            CDA+TGD+SA+ A K   D           P    I  +++SK PL  A    D+++ +
Sbjct: 287 SCDAFTGDMSAMVAKKWQLDGDASMVDDNGDPVSIWIAQELMSKEPLGAATRDMDSDFKD 346

Query: 240 IVSWTHYAMVTAEELGITQKNINQVSK---------DTTNPDVQRFLGIDKSSNIGEALG 290
           +V+W  Y MVTAEE+G+T  N    +           T++P + R L  +          
Sbjct: 347 VVAWVWYGMVTAEEMGVTAANAADSAATACALNEGGATSDPGMCRLL-TENLGLGTATNP 405

Query: 291 LTKDWTYRIIRHMGNYGEMFDRNLGNQ-----------SELKIPRG--YNALWSKGGLMY 337
           L  DW   ++   GNYGE +D    +            S   I R    NAL S+GG+ Y
Sbjct: 406 LAGDWMQAVLATAGNYGEAYDDAFCDGTYDGVSGSDAMSGCLISRSGTLNALVSEGGIQY 465

Query: 338 APPIR 342
           AP +R
Sbjct: 466 APAMR 470


>gi|193083731|gb|ACF09418.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [uncultured marine group II euryarchaeote
           SAT1000-15-B12]
          Length = 374

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 15/339 (4%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
              T+ +   S L  I  RG +KCG+     G   +  +G + G D+++C+AL++AI  D
Sbjct: 40  AAGTADAQLVSTLDTIIARGSMKCGVKDSQFGMGFLNDDGTYSGLDIEYCKALAAAIGVD 99

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHK- 133
              I+Y+      RF  L S +ID+L R T WT  R+  L   F  + ++DGQG +++  
Sbjct: 100 --SIEYILATGSNRFELLASHEIDVLIRTTTWTTSRDAGLNADFAGMNFYDGQGMLVNTG 157

Query: 134 ---KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHR 190
                G +S   L GA+ICV  GTTTE  L DY++ + M+   I  E        +    
Sbjct: 158 PDHFPGATSALDLDGANICVGIGTTTEGNLLDYYELNQMQMTTINTENAAAAQENFLDGS 217

Query: 191 CDAYTGDISALYALKLTNDR-PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           C  +TGD+SA+ A             I+P+++SK PL  A    D +W ++V+W  Y M+
Sbjct: 218 CGVWTGDMSAMVARMYGLRDEGMSLAIMPELLSKEPLGAATRDNDDDWNDVVAWVWYGMI 277

Query: 250 TAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEM 309
           TAEE GI   N      ++ NP + R L         +   L+  W   ++  +GNY + 
Sbjct: 278 TAEEFGIDGSNYMDFV-NSENPGINRLL-NSNLGLGTDDNPLSDTWMQSVLGAVGNYHDA 335

Query: 310 FDRNLGNQ----SELKIPRG--YNALWSKGGLMYAPPIR 342
           +DR+  +     +   I R    NAL S+GG+ YAPP+R
Sbjct: 336 YDRSFCDGDGGMNNCLISRAGTLNALVSEGGIQYAPPMR 374


>gi|193084366|gb|ACF10022.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [uncultured marine group II euryarchaeote AD1000-18-D2]
          Length = 394

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 112/356 (31%), Positives = 175/356 (49%), Gaps = 29/356 (8%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73
               + +T  S L  I  RG +KCG+     G   + A  G   G D+ +CRA+++A+  
Sbjct: 40  AAGIAEATPVSTLDTIIDRGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRAVAAALGL 99

Query: 74  DPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
           +P   ++Y+P +  +RF  L S  ID+L R T WT  R+  L   F  + +FDGQG ++ 
Sbjct: 100 NPDTDVEYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVR 159

Query: 133 KKKGISSVSQ-----LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           +    ++ +      L GA+ICV  GTTTE  + D+F + N+ +  +      E  A + 
Sbjct: 160 EDAYSAAGAGNSAGGLDGANICVGIGTTTEGNMVDWFSSRNIAFTSVPVADAAEATAKFI 219

Query: 188 AHRCDAYTGDISALYALKLTND-----RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
              CDA+TGD+SA+ A K   D        +  I  +++SK PL  A    D+++ ++V+
Sbjct: 220 DGSCDAFTGDMSAMVAKKWQLDGDGSMNGVDIWIAQELMSKEPLGAATRDMDSDFKDVVA 279

Query: 243 WTHYAMVTAEELGITQKNINQVSK---DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           W  Y MVTAEE+G+T  N    +    D ++P + R L  +       A  L  DW   +
Sbjct: 280 WVWYGMVTAEEMGVTAANAADSAAAACDGSDPGMCRLL-TENLGLGTAANPLAGDWMQAV 338

Query: 300 IRHMGNYGEMFDRNLGNQ-----------SELKIPRG--YNALWSKGGLMYAPPIR 342
           +   GNYGE +D    +            +   I R    NAL S+GG+ YAP +R
Sbjct: 339 LATAGNYGEAYDDAFCDGTYDGVSGSDAMTGCLISRSGTLNALVSEGGIQYAPAMR 394


>gi|256395455|ref|YP_003117019.1| extracellular solute-binding protein family 3 [Catenulispora
           acidiphila DSM 44928]
 gi|256361681|gb|ACU75178.1| extracellular solute-binding protein family 3 [Catenulispora
           acidiphila DSM 44928]
          Length = 321

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 100/315 (31%), Positives = 157/315 (49%), Gaps = 19/315 (6%)

Query: 27  LGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAK 86
           L   +  G ++  ++ G+ G +   A G W+G D D  RA+++A   D   + +L     
Sbjct: 25  LAAARATGTVRAVVSRGIRGLSSPDAAGVWRGLDTDMARAVAAAAIGDGEAVSWLSTEPA 84

Query: 87  ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGA 146
            R   L + + D++  N  WTL RE + G+ F  +T +DG+GF++    GI+  +QL+G 
Sbjct: 85  ARLDRLVAGEADLVVSNLTWTLGRETA-GVLFAGVTCYDGEGFLVRASDGITDPAQLAGR 143

Query: 147 SICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL 206
            +  QAGTT+   LA +F +  +   PI +    +  A Y +  C AY  D  AL   + 
Sbjct: 144 QVATQAGTTSAANLAAWFGSRGLAVTPIAYPTPADALAGYASGDCAAYVLDCVALAGERA 203

Query: 207 TNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSK 266
             D P EH IL   IS+ P+A A+   D EW+ +  W    ++ AE              
Sbjct: 204 ALDDPGEHRILDTTISREPMAMAVRDDDAEWFRLCRWVLQFLIAAEHAE----------- 252

Query: 267 DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGY 326
                +  R      +   G ALGL ++W  R++  +G YG+++ RNLG  S L +PRG 
Sbjct: 253 --DPAEAAR-----DAGRHGPALGLDENWAARVLDAVGTYGDVYARNLGPASGLDVPRGL 305

Query: 327 NALWSKGGLMYAPPI 341
           NALW++GGL Y  P+
Sbjct: 306 NALWTEGGLHYPMPL 320


>gi|193084292|gb|ACF09951.1| amino acid ABC transporter periplasmic amino acid-binding protein
           [uncultured marine group II euryarchaeote KM3-130-D10]
          Length = 394

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 113/356 (31%), Positives = 174/356 (48%), Gaps = 29/356 (8%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73
               + +T  S L  I  RG +KCG+     G   + A  G   G D+ +CRA+++A+  
Sbjct: 40  AAGIAEATPVSTLDTIIDRGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRAVAAALGL 99

Query: 74  DPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
           +P   ++Y+P +  +RF  L S  ID+L R T WT  R+  L   F  + +FDGQG ++ 
Sbjct: 100 NPDTDVEYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVR 159

Query: 133 KK-----KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
           +         +S   L GA+ICV  GTTTE  + D+F + N+ +  +      E  A + 
Sbjct: 160 EDVFPAAAAGNSAGGLDGANICVGIGTTTEGNMVDWFSSRNIAFTSVPVADAAEATAKFI 219

Query: 188 AHRCDAYTGDISALYALKLTNDRPS-----EHVILPDIISKSPLAPAIIQGDTEWYNIVS 242
              CDA+TGD+SA+ A K   D        +  I  +++SK PL  A    D+++ ++V+
Sbjct: 220 DGSCDAFTGDMSAMVAKKWQLDGDDSMGGVDIWIASELMSKEPLGAATRDMDSDFKDVVA 279

Query: 243 WTHYAMVTAEELGITQKNINQVSK---DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRI 299
           W  Y MVTAEE+G+T  N    +    D ++P + R L  +       A  L  DW   +
Sbjct: 280 WVWYGMVTAEEMGVTAANAAASAAAACDGSDPGMCRLL-TENLGLGTAANPLAGDWMQAV 338

Query: 300 IRHMGNYGEMFDRNLGNQ-----------SELKIPR--GYNALWSKGGLMYAPPIR 342
           +   GNYGE +D    +            +   I R    NAL S+GG+ YAP +R
Sbjct: 339 LATAGNYGEAYDDAFCDGTYDGVSGSAAMTGCLISRVGTLNALVSEGGIQYAPAMR 394


>gi|161170240|gb|ABX59211.1| substrate-binding protein [uncultured marine group II euryarchaeote
           EF100_57A08]
          Length = 439

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 117/351 (33%), Positives = 174/351 (49%), Gaps = 34/351 (9%)

Query: 25  SILGDIKKRGFLKCGINTGLVGFAEVK-ANGDWKGFDVDFCRALSSAIFDDPS-KIQYLP 82
           S +  I +RG LKCG+     G   +  A G   G D+ +CRAL++AI  DP   I+++P
Sbjct: 90  STMDVILERGMLKCGVKESQYGMGYLDSATGVRSGLDISYCRALAAAIGLDPMTDIEFVP 149

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG----IS 138
            ++++RF  L S +ID+L R T WT  R+  L   F  + +FDGQG ++ +         
Sbjct: 150 ASSQDRFEKLASGEIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILIREDTYPQGLTQ 209

Query: 139 SVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI 198
           + + L+ A +CV  GTTTE  LAD+  ++++    I      E  A  ++  CDA+TGD+
Sbjct: 210 TATMLTSAKVCVGTGTTTEGNLADFDTSNSVGMDIIGVVDAAEGTAKLQSGECDAFTGDM 269

Query: 199 SALYALKLTNDR----------PSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           SA+ A K   D           P    I P+I+SK PL  A    D +W ++V+W  Y M
Sbjct: 270 SAMVAKKWALDNDGTVVDDNGDPVGLWIAPEILSKEPLGAATRDNDDDWNDVVAWVWYGM 329

Query: 249 VTAEELGITQKNINQVSKDTT----NPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304
           VTAEE GIT  N   ++ D      NP   R +         +A  L   W   ++  +G
Sbjct: 330 VTAEEYGITSANYMTMASDAAAEGGNPGHNRLMNT-NLGLGTDANPLADTWMQAVMGAVG 388

Query: 305 NYGEMFDRNLGNQ-----------SELKIPRG--YNALWSKGGLMYAPPIR 342
           NYGE +D    +            +   + R    NAL S+GGL +APP+R
Sbjct: 389 NYGEAYDDAFCDGTYDGSSGSDTMTGCLLDRAGTANALVSEGGLQFAPPMR 439


>gi|320106917|ref|YP_004182507.1| family 3 extracellular solute-binding protein [Terriglobus
           saanensis SP1PR4]
 gi|319925438|gb|ADV82513.1| extracellular solute-binding protein family 3 [Terriglobus
           saanensis SP1PR4]
          Length = 336

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 102/338 (30%), Positives = 167/338 (49%), Gaps = 7/338 (2%)

Query: 7   VSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRA 66
           VS+L L +    +       L  ++  G L CG+      +     +G   GFD+D C+A
Sbjct: 4   VSLLLLAVCSSLTLGAQ-QTLQKVRAAGVLTCGVIAEDAEYNTEDDHGSRGGFDLDLCKA 62

Query: 67  LS-SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFD 125
           ++ +A+ +         L+ K    AL + +ID L            +  L       +D
Sbjct: 63  VAVAALGEKAQTKVITFLDDKSGVDALIAGKID-LIATLSADFSHTTNASLGESAPVLYD 121

Query: 126 GQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAA 185
           G GF++ +K GI+  + L+   +C  A T  E  L  +F   ++   P  F+   E++AA
Sbjct: 122 GVGFLVLRKSGIAHAADLTHRKVCFLAETNVETALQAWFTRQHLDLLPFPFQEEGEMEAA 181

Query: 186 YRAHRCDAYTGDISALYALKLTND-RPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWT 244
           Y    C A  GD++ L   + + + +  +H+ILP++I+  PLA A    D +W  IV WT
Sbjct: 182 YITKNCAAIAGDLTRLAQTRASFETQAPDHMILPEVIAADPLAFAYRSSDPQWGRIVDWT 241

Query: 245 HYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMG 304
              +   E LG+T  NI+ +S  + +P V+  LG   +  +G  LGL++DW   ++R +G
Sbjct: 242 AQVLFHGEALGVTSANID-ISAKSADPAVRHLLGATHA--VGTPLGLSEDWAASVLRSVG 298

Query: 305 NYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           NY E+FDR  G  S L + RG N L S+GGL+   P++
Sbjct: 299 NYREVFDRTFGEASTLSLTRGRNRLTSEGGLILPLPLK 336


>gi|323165231|gb|EFZ51021.1| general L-amino acid-binding periplasmic protein aapJ [Shigella
           sonnei 53G]
          Length = 254

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 117/253 (46%), Positives = 171/253 (67%), Gaps = 1/253 (0%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS-ILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K    ++    +L   +   +A   L  ++K+GF++CGI+ GL GF+   A+G + G 
Sbjct: 1   MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR +++A+F D +K++Y PL AKERF ALQS ++D+LSRNT WT  R+  +G+AF 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
            +T +DG GF+ H K G+ S  +L GA++C+QAGT TEL +ADYFKA+NMKY P+ F+R 
Sbjct: 121 GVTDYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS 180

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
           +E   A  + RCD    D S LYAL++    P+E ++LP++ISK PL P + +GD EW++
Sbjct: 181 DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS 240

Query: 240 IVSWTHYAMVTAE 252
           IV WT +AM+ AE
Sbjct: 241 IVRWTLFAMLNAE 253


>gi|170516837|gb|ACB15239.1| hypothetical protein [uncultured marine group II euryarchaeote
           DeepAnt-15E7]
          Length = 393

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 111/363 (30%), Positives = 172/363 (47%), Gaps = 36/363 (9%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFD 73
               + +T  S L  I  RG +KCG+     G   + A  G   G D+ +CR +++A+  
Sbjct: 32  AAGIAEATPVSTLDTIIARGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRGVAAALGL 91

Query: 74  DPS-KIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH 132
           +P   ++Y+P +  +RF  L S  ID+L R T WT  R+  L   F  + +FDGQG ++ 
Sbjct: 92  NPDTDVEYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVR 151

Query: 133 -----KKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYR 187
                 +   +S S L+GA+ICV  GTTTE  + D+F +  + +  +      E  A + 
Sbjct: 152 EDAFGAEASGNSASALNGANICVGIGTTTEGNMVDWFSSRGIAFTSVPVADAAEATAKFI 211

Query: 188 AHRCDAYTGDISALYALKLTND-----------RPSEHVILPDIISKSPLAPAIIQGDTE 236
              CDA+TGD+SA+ A K   D                 I  +++SK PL  A    D++
Sbjct: 212 DGSCDAFTGDMSAMVAKKWQLDGDASMGVDENGDAIGIWIASELMSKEPLGAATRDMDSD 271

Query: 237 WYNIVSWTHYAMVTAEELGITQKNINQVSK----DTTNPDVQRFLGIDKSSNIGEALGLT 292
           + ++V+W  Y MVTAEE+G+T  N    +     D ++P + R L  +          L 
Sbjct: 272 FKDVVAWVWYGMVTAEEMGVTAANAAASATAACADGSDPGMCRLL-TENLGLGTATNPLA 330

Query: 293 KDWTYRIIRHMGNYGEMFDRNLGNQ-----------SELKIPR--GYNALWSKGGLMYAP 339
            DW   ++   GNYGE +D    +            +   I R    NAL S+GG+ YAP
Sbjct: 331 GDWMQAVLATAGNYGEAYDDAFCDGTYDGVSGSAAMTGCLISRVGTLNALVSEGGIQYAP 390

Query: 340 PIR 342
            +R
Sbjct: 391 AMR 393


>gi|329295742|ref|ZP_08253078.1| amino-acid ABC transporter-binding protein yhdW precursor [Plautia
           stali symbiont]
          Length = 216

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 94/218 (43%), Positives = 143/218 (65%), Gaps = 2/218 (0%)

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           +G  F  + Y+DG GF+ HKK  + S  +L GA++C+Q GT TEL +ADYFKA+ M+Y P
Sbjct: 1   MGFLFAGVNYYDGIGFLTHKKASLKSAKELDGATVCIQVGTDTELNVADYFKANKMQYTP 60

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + F+R +E   A  + RCD  + D S LYA ++   +P + ++L ++ISK PL P + +G
Sbjct: 61  VTFDRSDESAKALDSGRCDTLSSDQSQLYAQRIKLGKPDDFIVLAEVISKEPLGPVVRRG 120

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTK 293
           D +W+ IV W+ +AM+ AEE+GI+ K++++++   T PD+   LG +   + G+ L L  
Sbjct: 121 DDDWFTIVKWSLFAMLNAEEMGISSKSVDEMAAKPTTPDMAHLLGAE--GDFGKDLKLDN 178

Query: 294 DWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWS 331
              Y II+ +GNY E+FDRN+G  S LKI RG NALW+
Sbjct: 179 KCAYNIIKQVGNYQEVFDRNVGKDSALKIARGQNALWN 216


>gi|7381255|gb|AAF61456.1|AF139661_1 putative amino acid ABC transporter binding protein [Azospirillum
           brasilense]
          Length = 236

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 95/235 (40%), Positives = 137/235 (58%), Gaps = 4/235 (1%)

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKAH 167
            R+ + G+ F  +  FDGQGFI H+ +GI+ +S L  GAS+CV   TTT   L D+    
Sbjct: 2   QRDATFGIDFPAVYLFDGQGFIAHRAQGIARLSDLPPGASVCVIEQTTTLRNLEDWMART 61

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKL-TNDRPSEHVILPDIISKSPL 226
            +++        E   +A+  H CD YT D   L+A +L       ++VILP+ ISK PL
Sbjct: 62  GLRFRLKPVRSTEGALSAFFNHHCDLYTSDRIGLHAQRLLKAPEREDYVILPEAISKEPL 121

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIG 286
            P +   +  W+++V W   A V AEE GIT  N  ++ ++  +P+V+RFLG   ++ +G
Sbjct: 122 GPMVRPDERRWFDVVRWVFLATVLAEEKGITTANAARLKEEAQDPEVRRFLGA--TAGVG 179

Query: 287 EALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
             LGL   W +R++  +GNYGE+FDR+LG  S L I RG N LW  GGL YAPP+
Sbjct: 180 WGLGLDDGWAFRVVTQVGNYGEIFDRHLGAASPLGIDRGMNGLWMNGGLHYAPPL 234


>gi|159904020|ref|YP_001551364.1| hypothetical protein P9211_14791 [Prochlorococcus marinus str. MIT
           9211]
 gi|159889196|gb|ABX09410.1| Hypothetical protein P9211_14791 [Prochlorococcus marinus str. MIT
           9211]
          Length = 215

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 86/216 (39%), Positives = 130/216 (60%), Gaps = 6/216 (2%)

Query: 130 IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAH 189
           ++ K   ISS+  L    ICV +GTTTE  + D F+A ++ Y PI ++ + ++ A Y   
Sbjct: 1   MVKKNSSISSIDDLVNQPICVGSGTTTEQNINDAFEARSIPYTPIKYQDLNQVVAGYLQG 60

Query: 190 RCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMV 249
           RC A T D S L A +     P EH+IL DI+SK PLAPA +  D +  + + W  Y+++
Sbjct: 61  RCAAMTSDRSQLAAARSGFSNPKEHIILKDILSKEPLAPASLGADQKLGDAMRWVIYSLI 120

Query: 250 TAEELGITQKNINQVSK----DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305
           +AEE GIT+ NIN+  K    +     ++RFLG++   ++GE +GL   +   +IR  GN
Sbjct: 121 SAEEKGITKVNINEKLKTAKANPQLKPLRRFLGVE--GDLGEKIGLDNSFVVNVIRATGN 178

Query: 306 YGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPI 341
           YGE+++R+LG  S + IPRG N L+ KGG+  +PP 
Sbjct: 179 YGEIYNRHLGPNSNVPIPRGLNELYIKGGVQISPPF 214


>gi|260223278|emb|CBA33680.1| General L-amino acid-binding periplasmic protein aapJ [Curvibacter
           putative symbiont of Hydra magnipapillata]
          Length = 173

 Score =  203 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 85/175 (48%), Positives = 118/175 (67%), Gaps = 3/175 (1%)

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLT-NDRPSEHVILPDIISKSPLA 227
           M   PIVFE++E  + AY + RC AYT D S L + +      P++HVILP++ISK PL 
Sbjct: 1   MNIKPIVFEKLEAAEGAYFSGRCVAYTTDASGLASTRNKVAKNPADHVILPELISKEPLG 60

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGE 287
           P + +GD EW  IV WT Y ++ AEE G+TQ N++ +  +T +P V R LG   + + G+
Sbjct: 61  PMVRRGDDEWTAIVKWTVYGLLEAEENGVTQANVDDLKANTKDPVVGRLLGT--TEDTGK 118

Query: 288 ALGLTKDWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
            LGL K+W  R I+  GNYGE+F+RN+G +S L++PRG N LWSKGG+ YAPP+R
Sbjct: 119 LLGLDKEWLARAIKTTGNYGEIFERNVGPKSPLQLPRGLNNLWSKGGVQYAPPVR 173


>gi|262165601|ref|ZP_06033338.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           mimicus VM223]
 gi|262025317|gb|EEY43985.1| amino acid ABC transporter amino acid-binding protein [Vibrio
           mimicus VM223]
          Length = 166

 Score =  195 bits (496), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 82/169 (48%), Positives = 115/169 (68%), Gaps = 3/169 (1%)

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +VF+   +    + A RCD  T D S LYAL+L  ++P   ++LP+IISK PL P + Q 
Sbjct: 1   MVFDTAAQTSKGFDAGRCDVLTTDQSGLYALRLNLEKPDSALVLPEIISKEPLGPVVRQD 60

Query: 234 DTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLGIDKSSNIGEALGLTK 293
           D +W+N+  W  YAMV AEE GIT KN++++ K + NP+V+R LG+D     G  LG+  
Sbjct: 61  DDKWFNVAKWVLYAMVNAEEYGITSKNVDEMMK-SDNPEVKRILGLDGPKGTG--LGIRD 117

Query: 294 DWTYRIIRHMGNYGEMFDRNLGNQSELKIPRGYNALWSKGGLMYAPPIR 342
           DW+Y+I++ +GNYGE F+R +G+ S L+I RG NALW+ GG MYAPPIR
Sbjct: 118 DWSYQIVKQVGNYGESFERTVGSGSPLQIDRGVNALWNAGGFMYAPPIR 166


>gi|218516840|ref|ZP_03513680.1| general L-amino acid ABC transporter, substrate-binding protein
           [Rhizobium etli 8C-3]
          Length = 211

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 118/211 (55%), Positives = 167/211 (79%)

Query: 15  LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD 74
           +   + + +A+ LGD+K +GF++CG+NTGL GFA   A+G+W GFDVDFC+A++SA+F D
Sbjct: 1   MALGAPAASATTLGDVKAKGFVQCGVNTGLAGFAAPDASGNWAGFDVDFCKAVASAVFGD 60

Query: 75  PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKK 134
           P+K+++ PL+A  RF ALQS +ID+L+RNT W++ R+ +LGL FR + Y+DGQGF++ K 
Sbjct: 61  PTKVKFTPLSAANRFPALQSGEIDVLARNTTWSINRDTALGLNFRFVNYYDGQGFMVRKS 120

Query: 135 KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY 194
             + S  +LSGAS+CVQ+GTTTEL LADYFKA+N++Y+P+VFE+++E++AAY A RCD Y
Sbjct: 121 LNVKSALELSGASVCVQSGTTTELNLADYFKANNLQYNPVVFEKLDEVNAAYDAGRCDVY 180

Query: 195 TGDISALYALKLTNDRPSEHVILPDIISKSP 225
           T D S LY+L+LT   P EH ILP+IISK P
Sbjct: 181 TTDQSGLYSLRLTLKNPDEHAILPEIISKEP 211


>gi|47079429|gb|AAT10172.1| periplasmic substrate binding protein [uncultured marine group II
           euryarchaeote DeepAnt-JyKC7]
          Length = 373

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 100/320 (31%), Positives = 156/320 (48%), Gaps = 16/320 (5%)

Query: 21  STNASILGDIKKRGFLKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPS-KI 78
           +T  S L  I  RG +KCG+     G   + A  G   G D+ +CR +++A+  +P   I
Sbjct: 46  ATPVSTLDTIIARGSMKCGVKESQYGMGYLDAGTGVRSGLDISYCRGVAAALGLNPDTDI 105

Query: 79  QYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGF-----IMHK 133
           +Y+P +  +RF  L S  ID+L R T WT  R+  L   F  + +FDGQG      +   
Sbjct: 106 EYIPASGSDRFDKLASGTIDVLIRTTTWTTSRDADLNADFAGMNFFDGQGILVREDVFPA 165

Query: 134 KKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193
               +S + L+GA+ICV  GTTTE  + D+F + N+ +  +      E  A +    CDA
Sbjct: 166 ADAGNSAAGLNGANICVGIGTTTEGNMVDWFSSRNIAFTSVPVADAAEATAKFIDGSCDA 225

Query: 194 YTGDISALYALKLTNDRPSEH-----VILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
           +TGD+SA+ A K   D           I  +++SK PL  A    D+++ ++V+W  Y M
Sbjct: 226 FTGDMSAMVAKKWQLDGDDSMGGVGIWIAQELMSKEPLGAATRDMDSDFKDVVAWVWYGM 285

Query: 249 VTAEELGITQKNINQVSK---DTTNPDVQRFLGIDKSSNIGEALGLTKDWTYRIIRHMGN 305
           VTAEE G+T  N   ++    D ++P V R L  +          L   W   +++  GN
Sbjct: 286 VTAEENGVTAANAADMAAAACDGSDPGVCRLL-TENLGLGTTDNPLAGTWMQAVLQAAGN 344

Query: 306 YGEMFDRNLGNQSELKIPRG 325
           YGE +D    + +   +   
Sbjct: 345 YGEAYDDAFCDGTYDGVSGS 364


>gi|117618623|ref|YP_855303.1| glutamine/glutamate ABC transporter, periplasmic
           glutamine/glutamate-binding protein [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117560030|gb|ABK36978.1| glutamine/glutamate ABC transporter, periplasmic
           glutamine/glutamate-binding protein [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 278

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 104/247 (42%), Gaps = 10/247 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K   V    L+ L   S + +A    L  IK R  L  G+ T    F  V   G++ G
Sbjct: 1   MKKITSVLFSALLGLGLASGAAHAADGSLDKIKARDKLIVGVFTDKPPFGYVDEKGNYVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD D  R  +  +  D +K++++ +    R   LQS ++D++  N   T  R     + F
Sbjct: 61  FDTDLGRRFAKDLLGDENKVEFVAVEPASRIPFLQSDKVDLILANMTVTPER--RQVVDF 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                      ++ +      +  L+  ++ V  GTT ++ L      ++  +  + FE+
Sbjct: 119 TNPNLRVAVQVLVPQGSPAKQLDDLASKTLIVTTGTTADIWLTR----NHPDWKVLKFEK 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E   A    R DAY  D   L++     + P   V+   + S+ P+APA+ +G+ E  
Sbjct: 175 NTESLQALAQGRGDAYAQDNLVLFSWA--KENPGYRVLPEKLGSEDPIAPAVKKGNIELR 232

Query: 239 NIVSWTH 245
           + V+   
Sbjct: 233 DWVNDRL 239


>gi|218888235|ref|YP_002437556.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris str. 'Miyazaki F']
 gi|218759189|gb|ACL10088.1| extracellular solute-binding protein family 3 [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 271

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 110/255 (43%), Gaps = 12/255 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M +   V +   + +  T    +A  + DIK RG L CG+    V F  +        GF
Sbjct: 1   MKR--LVLLAVALCVVLTGTMAHAGKIEDIKARGALVCGVKDSTVPFGYIDEQSKQIVGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D C+A++  +      ++   + +  R   L    +D+++        R+    + F 
Sbjct: 59  DIDICKAVADKLGVK---LELKTVTSATRIPMLTQGSVDMVAATMTHKFERD--DVIDFS 113

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + DGQ  ++ K  G+ S + L G  +    G+T+E  +    KA   +   + F+  
Sbjct: 114 ITYFMDGQKLLVKKGGGVKSAADLKGKKVATAKGSTSEKNI----KAAQPEATVVSFDEY 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +   A +  + +A T D + L  L+ ++  P +  I+ D IS  P    + + D+++ +
Sbjct: 170 PQAFLALKQGKAEAVTTDSTILLGLRNSDPEPDKWEIVGDYISPEPYGLGLAENDSKFRD 229

Query: 240 IVSWTHYAMVTAEEL 254
           +V+ T   +  + E 
Sbjct: 230 LVNRTLVDLWNSGEY 244


>gi|239826929|ref|YP_002949553.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           WCH70]
 gi|239807222|gb|ACS24287.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           WCH70]
          Length = 286

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/282 (21%), Positives = 107/282 (37%), Gaps = 36/282 (12%)

Query: 1   MYKDF-------FVSILCLIILFFTSFSTNASI------------------LGDIKKRGF 35
           M +            I  L I      S+ +S                   L  IKKRG 
Sbjct: 1   MKRKIVWKMWITLALIALLSITALAGCSSESSTSNKGDGAKSTETSGGTNTLEKIKKRGK 60

Query: 36  LKCGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQS 94
           L  G+   L  F       G  +GFD+D  + L+  I  D +KI+   + +K R   L +
Sbjct: 61  LVVGVKYDLNLFGLKNPETGKVEGFDIDIAKGLAKKILGDENKIELKEVTSKTRIPMLNN 120

Query: 95  KQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAG 153
            +ID +      T  R+    + F  + +  GQ  ++ K   I+SV  L  G ++    G
Sbjct: 121 GEIDAIIATMTITEERKK--EVDFSDVYFMAGQSLLVKKDSKINSVKDLKKGMTVLTAKG 178

Query: 154 TTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213
           +T+   +           + + FE   E   A +A + DA T D + L  +   +     
Sbjct: 179 STSAQNIRKVAPE----VNVLEFENYAEAFTALKAGQGDALTTDNALLLGMAKQDPN--- 231

Query: 214 HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           + +L +  ++ P   A+ +GD E+  +++     +    E  
Sbjct: 232 YRVLDETFTEEPYGIAVRKGDKEFLQVINEYLKEIKENGEYD 273


>gi|78356474|ref|YP_387923.1| extracellular solute-binding protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78218879|gb|ABB38228.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 271

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 59/256 (23%), Positives = 112/256 (43%), Gaps = 12/256 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M +   +++   + + F++ + +A  + +IK RG L  G+   +V F  V  N     GF
Sbjct: 1   MKRLLLIAV--ALGMIFSAATASAGKIEEIKDRGVLVAGVKDSVVPFGFVDENSKQLVGF 58

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD CR ++  +  +   ++   + +  R   +    +DI +        R+    + F 
Sbjct: 59  DVDICRYIAGQLGVE---LELKTVTSATRIPMVTQGSVDIAAATMTHKHERD--NVIDFS 113

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + DGQ  ++ K  GI+SV+ L G  +    G+T+E  +    KA       + F+  
Sbjct: 114 ITYFMDGQKILVAKDSGINSVADLKGKKVATVKGSTSEKNI----KAAQPDCRVLSFDEY 169

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +   A +  +  A T D + L  LK ++  P + VI  D IS  P    + + D+++ +
Sbjct: 170 PQAMLALKQGKASAVTTDSTILLGLKNSDPEPEKWVIAGDYISAEPYGLGLPENDSDFRD 229

Query: 240 IVSWTHYAMVTAEELG 255
            V+     M  + E  
Sbjct: 230 FVNKALNDMWRSGEYE 245


>gi|332041717|gb|EGI78069.1| extracellular solute-binding protein [Hylemonella gracilis ATCC
           19624]
          Length = 297

 Score =  173 bits (438), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 105/257 (40%), Gaps = 5/257 (1%)

Query: 1   MYKDFFVSILCLIILFFTSF--STNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K   VS   + +    +   +     L  IK  G +  G+       +    +G + G
Sbjct: 1   MKKHLLVSAFAVALATLAAGVQAQANDTLAKIKSSGKVVMGVRESSPPLSYTLGDGKYTG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           + V+ C+ +  +I    + ++Y P+ +  R   +Q+  +DI   +T     R+    ++F
Sbjct: 61  YHVELCQNILKSI-APGAAVEYTPVTSANRIPLVQNGTVDIECGSTTNNATRQK--DVSF 117

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
              TY       +     I S++ L G ++    GTT+   L  + +  ++K+  +  + 
Sbjct: 118 ALTTYVTEVRTAVKSTSKIKSIADLEGKTVATTTGTTSVALLRKHKRGADIKFTEVYGKD 177

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +      + R DA+  D + L  L   +  P + VI+ + ++  P+A  + + D  + 
Sbjct: 178 HADSFLLLESGRADAFVMDDNLLAGLIAGSKNPKDFVIVGETLNVEPIAIMVRKDDPAFK 237

Query: 239 NIVSWTHYAMVTAEELG 255
             V     A + + EL 
Sbjct: 238 KAVDDYIRAAIKSGELN 254


>gi|239909117|ref|YP_002955859.1| amino acid ABC transporter substrate binding protein precursor
           [Desulfovibrio magneticus RS-1]
 gi|239798984|dbj|BAH77973.1| amino acid ABC transporter substrate binding protein precursor
           [Desulfovibrio magneticus RS-1]
          Length = 272

 Score =  172 bits (437), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 10/256 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M K   +++L  +     +    A  L DIK RG L  G+      F  V        GF
Sbjct: 1   MRKAARLTVLACLFTLVAAMPALAGKLDDIKSRGTLVAGVKDSQRPFGFVDEKTNQIVGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           ++D  +AL++ +    +K++  P+ +  R   L    +DI++        RE    + F 
Sbjct: 61  EIDLMQALATRL---NAKLELKPVTSSTRIPMLTQGAVDIVAATMTHKKERE--DQVDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ  ++ K  GI SV+ L+G  +    G+T+E  +    K        I FE  
Sbjct: 116 ITYFMTGQKLLVKKDGGIKSVADLAGKKVGSVKGSTSEQNV----KKAQPDCTVISFETY 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E   A +  +  A T D S L  +K ++D+P    I+ + IS  P    + + D+++ +
Sbjct: 172 PEAFLALKQGKVQAVTTDESILVGIKNSDDKPEAWDIVGEYISPEPYGLGVAENDSDFRD 231

Query: 240 IVSWTHYAMVTAEELG 255
            V+     M    E  
Sbjct: 232 FVNAALMDMWEKGEYQ 247


>gi|258406273|ref|YP_003199015.1| extracellular solute-binding protein family 3 [Desulfohalobium
           retbaense DSM 5692]
 gi|257798500|gb|ACV69437.1| extracellular solute-binding protein family 3 [Desulfohalobium
           retbaense DSM 5692]
          Length = 273

 Score =  172 bits (436), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 11/261 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKAN-GDWKGF 59
           M K   + +   +       +  A  L +IK+RG++  G+   +V F  V  +  +  GF
Sbjct: 1   MRKMVLLLVAMTVTCTLALGTAWADKLEEIKERGYMVAGVKDAVVPFGYVDKDTNNIVGF 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DVD C+ L+  +  D   ++  P+ +  R   L    +DIL+        RE    + F 
Sbjct: 61  DVDICKELADKLGVD---LRLKPVTSSTRIPMLAQGSVDILAATMTHKFSRE--DSIDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ  ++ K   ISS + L+G  +    G+T+E  +    K    +   + FE  
Sbjct: 116 TTYFMTGQKLLVKKDSDISSTADLAGKKVGTAKGSTSEKNI----KEAQPESRVLSFEGY 171

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +   A R  +  A T D + L  LK +   P ++ I+ + IS  P    + + ++ + +
Sbjct: 172 PQAFLALRQGKVKAVTTDATILLGLKNSAPDPDKYAIVGEYISDEPYGLGVPENESNFRD 231

Query: 240 IVSWTH-YAMVTAEELGITQK 259
            V+ +     V  E   I  K
Sbjct: 232 FVNRSLAKMWVNGEYQEIYSK 252


>gi|295400877|ref|ZP_06810853.1| extracellular solute-binding protein family 3 [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294977140|gb|EFG52742.1| extracellular solute-binding protein family 3 [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 284

 Score =  172 bits (435), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 60/280 (21%), Positives = 113/280 (40%), Gaps = 34/280 (12%)

Query: 1   MYKDF---------FVSILCLIILFFTS--------------FSTNASILGDIKKRGFLK 37
           M +             ++L + +L                   S+  + L  IKKRG L 
Sbjct: 1   MKRKTIWKMCMALALTALLSITVLAGCGSESSTTDKGDGSTKTSSETNTLEKIKKRGKLV 60

Query: 38  CGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
            G+   L  F       G+ +GFD+D  + L+  I  D +KI+   + +K R   L + +
Sbjct: 61  VGVKYDLNLFGLKNPETGEVEGFDIDIAKGLAKKILGDENKIELKEVTSKTRIPMLNNGE 120

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTT 155
           ID +      T  R+    + F  + +  GQ  ++ K   I+SV  L  G ++    G+T
Sbjct: 121 IDAIIATMTITEERKK--EVDFSDVYFMAGQSLLVKKDSKINSVKDLKKGMTVLTAKGST 178

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
           +   +    +    + + + FE   E   A +A + DA T D + L  +   +     + 
Sbjct: 179 SAQNI----RKAAPQVNVLEFENYAEAFTALKAGQGDALTTDNALLLGMAKQDPN---YR 231

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +L +  ++ P   A+ +GDTE+  +++     +    E  
Sbjct: 232 VLDETFTEEPYGIAVRKGDTEFLQVINEYLKEIKENGEYD 271


>gi|315928341|gb|EFV07656.1| Putative amino-acid transporter periplasmic solute-binding protein
           [Campylobacter jejuni subsp. jejuni DFVF1099]
          Length = 279

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 58/279 (20%), Positives = 114/279 (40%), Gaps = 16/279 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K     +   + +   +   N+       L  IK+ G ++ G+      F  V   G+
Sbjct: 1   MKKILLSVLTAFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+D+   + ++  +F D +K+Q++ + A  R   L+S ++DI+  N   T  R     
Sbjct: 61  NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAE--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G  + K   I+SV  L   ++ +  GTT +      F  +      + 
Sbjct: 119 VDFCSPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAY----FTQNYPNIKTLK 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++  E  AA    R DA + D + L+A     D P   + + ++ +K  +APA+ +GD 
Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           E    +       +   +     K  ++  K     +V+
Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDEVK 268


>gi|153953344|ref|YP_001394109.1| extracellular amino acid-binding protein [Clostridium kluyveri DSM
           555]
 gi|219853973|ref|YP_002471095.1| hypothetical protein CKR_0630 [Clostridium kluyveri NBRC 12016]
 gi|146346225|gb|EDK32761.1| Predicted extracellular amino acid-binding protein [Clostridium
           kluyveri DSM 555]
 gi|219567697|dbj|BAH05681.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 268

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 89/251 (35%), Gaps = 13/251 (5%)

Query: 1   MYKDF--FVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M K F     ++ L+ +  T        N +   DIK +G    G++            G
Sbjct: 1   MKKKFGILTIVIFLMGILLTGCGQTQKSNDTSWDDIKAKGKFVVGLDDSFPPMGFRDEKG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFD+D  +A +  +      +++ P+      L+L +K ID++      T  R+   
Sbjct: 61  QIVGFDIDMAKAAAEKLGVK---VEFKPVEWDGVILSLNNKDIDVIWNGLTITEERKK-- 115

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
            + F  +   + Q  ++ K   I+S   LSG ++ +Q G+++E  L              
Sbjct: 116 QIVFSKVYLQNKQIIVVQKNSTINSKKDLSGKTVGLQMGSSSEKALNADADTSKSLKEVR 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +    E        R DA   D   +        +P  + IL D          I + D
Sbjct: 176 KYSNNTEALLDLSQGRTDAVIVDE--VVGRYYIEKKPDLYKILDDNFGVEDYGVGIRKTD 233

Query: 235 TEWYNIVSWTH 245
           T +   +    
Sbjct: 234 TSFKEKLDEAL 244


>gi|56420512|ref|YP_147830.1| glutamine ABC transporter glutamine-binding protein [Geobacillus
           kaustophilus HTA426]
 gi|261420185|ref|YP_003253867.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           Y412MC61]
 gi|297529846|ref|YP_003671121.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           C56-T3]
 gi|319766997|ref|YP_004132498.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           Y412MC52]
 gi|56380354|dbj|BAD76262.1| glutamine ABC transporter (glutamine-binding protein) [Geobacillus
           kaustophilus HTA426]
 gi|261376642|gb|ACX79385.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           Y412MC61]
 gi|297253098|gb|ADI26544.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           C56-T3]
 gi|317111863|gb|ADU94355.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           Y412MC52]
          Length = 281

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 57/277 (20%), Positives = 111/277 (40%), Gaps = 31/277 (11%)

Query: 1   MYKD---FFVSILCLIILFFTS-----------------FSTNASILGDIKKRGFLKCGI 40
           M K    +++++    +L   +                  +   + L  IK+RG L  G+
Sbjct: 1   MRKKAWKWWIAVALTALLSAVALTGCSTTDKGEGGTSSETAKATNTLEKIKQRGKLIVGV 60

Query: 41  NTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDI 99
              L  F       G  +GFD+D  + L+  I  D +KI+   + +K R   L + +ID 
Sbjct: 61  KYDLNLFGLKNPETGKVEGFDIDIAKGLAKKILGDENKIELKEVTSKTRIPMLNNGEIDA 120

Query: 100 LSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTEL 158
           +      T  R+    + F  + +  GQ  ++ K   I+SV  L  G ++    G+T+  
Sbjct: 121 IIATMTITEERKK--EVDFSDVYFMAGQSLLVKKDSPINSVKDLKKGMTVLTAKGSTSAE 178

Query: 159 TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILP 218
            +         + + + FE   E   A +A + DA T D + L+ +   +     + +L 
Sbjct: 179 NIRKVAP----QVNVLEFENYAEAFTALKAGQGDALTTDNALLWGMAKQDPN---YRVLD 231

Query: 219 DIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +  ++ P   A+ +GD E   +++     +    E  
Sbjct: 232 ETFTEEPYGIAVRKGDKELLQVINEYLKEIKENGEYD 268


>gi|312111273|ref|YP_003989589.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           Y4.1MC1]
 gi|311216374|gb|ADP74978.1| extracellular solute-binding protein family 3 [Geobacillus sp.
           Y4.1MC1]
          Length = 284

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 60/280 (21%), Positives = 113/280 (40%), Gaps = 34/280 (12%)

Query: 1   MYKD----FFVSILCLIILFFTSFSTNAS-------------------ILGDIKKRGFLK 37
           M +      ++++    +L  T  +   S                    L  IKKRG L 
Sbjct: 1   MKRKTIWKMWMALALTALLSITVLAGCGSESSTTDKGDGSTKTSSETNTLEKIKKRGKLV 60

Query: 38  CGINTGLVGFAEVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQ 96
            G+   L  F       G+ +GFD+D  + L+  I  D +KI+   + +K R   L + +
Sbjct: 61  VGVKYDLNLFGLKNPETGEVEGFDIDIAKGLAKKILGDENKIELKEVTSKTRIPMLNNGE 120

Query: 97  IDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTT 155
           ID +      T  R+    + F  + +  GQ  ++ K   I+SV  L  G ++    G+T
Sbjct: 121 IDAIIATMTITEERKK--EVDFSDVYFMAGQSLLVKKDSKINSVKDLKKGMTVLTAKGST 178

Query: 156 TELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHV 215
           +   +    +    + + + FE   E   A +A + DA T D + L  +   +     + 
Sbjct: 179 SAQNI----RKAAPQVNVLEFENYAEAFTALKAGQGDALTTDNALLLGMAKQDPN---YR 231

Query: 216 ILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELG 255
           +L +  ++ P   A+ +GDTE+  +++     +    E  
Sbjct: 232 VLDETFTEEPYGIAVRKGDTEFLQVINEYLKEIKENGEYD 271


>gi|157415241|ref|YP_001482497.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 81116]
 gi|283956380|ref|ZP_06373860.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 1336]
 gi|157386205|gb|ABV52520.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 81116]
 gi|283792100|gb|EFC30889.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 1336]
 gi|307747883|gb|ADN91153.1| Surface antigen, CjaA [Campylobacter jejuni subsp. jejuni M1]
 gi|315932110|gb|EFV11053.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni 327]
          Length = 279

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/279 (21%), Positives = 115/279 (41%), Gaps = 16/279 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K     +   +++   +   N+       L  IK+ G ++ G+      F  V   G+
Sbjct: 1   MKKILLSVLTAFVVVVLAACGGNSDSKTLNSLDKIKQNGVIRIGVFGDKPPFGYVDEKGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+D+   + ++  +F D +K+Q++ + A  R   L+S ++DI+  N   T  R     
Sbjct: 61  NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAE--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G  + K   I+SV  L   ++ +  GTT +      F  +      + 
Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAY----FTQNYPDIKTLK 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++  E  AA    R DA + D + L+A     D P   + + ++ +K  +APA+ +GD 
Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMAIKELGNKDVIAPAVKKGDK 232

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           E    +       +   +     K  ++  K     DV+
Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268


>gi|226938961|ref|YP_002794032.1| GltI [Laribacter hongkongensis HLHK9]
 gi|226713885|gb|ACO73023.1| GltI [Laribacter hongkongensis HLHK9]
          Length = 298

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 100/257 (38%), Gaps = 7/257 (2%)

Query: 4   DFFVSILCLIILFFTSFSTN-ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
              VS L   ++   + +      L  ++++G    G     + F+ + AN    G+ +D
Sbjct: 6   RLLVSALAASVVATPALAAELTGTLKKVQEKGEFVIGHRESSIPFSYLDANQKPVGYMMD 65

Query: 63  FCRALSSAIFDDPSK----IQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
            C  +++ +  +        + +P+ ++ R   + +  +DI   +T  +L R+  +   F
Sbjct: 66  ICNRIAAEVKKEAGAKGAVTRLVPVTSQTRIPLMTNGTVDIECGSTTNSLERQKQVA--F 123

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               Y      ++    GI S+S L G  +    GTT++  +  + K  N+    +  + 
Sbjct: 124 SVTPYITSIRMLVKADSGIKSLSDLDGKPVVTTTGTTSDRYIKQHEKGQNLNVKNVYGKD 183

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +        R  A+  D   L  L   +  P E  I+ + +S  P    + + D +  
Sbjct: 184 HADSFLMVSTGRASAFVMDDVLLAGLIANSKNPKEFSIVGETLSVEPYGVMMRKDDPQLK 243

Query: 239 NIVSWTHYAMVTAEELG 255
            +V      M+ + EL 
Sbjct: 244 AVVDRVIVGMMKSGELD 260


>gi|121611643|ref|YP_999450.1| extracellular solute-binding protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121556283|gb|ABM60432.1| extracellular solute-binding protein, family 3 [Verminephrobacter
           eiseniae EF01-2]
          Length = 296

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 98/259 (37%), Gaps = 6/259 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M +   ++ +   +LF  + +  A  L  I + G +        V F+ +       GF 
Sbjct: 1   MKRSVLMASMAAAVLFSATGAQAADTLAKIAESGKITLAYRESSVPFSYLDGANKPIGFS 60

Query: 61  VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           V+   A+  A+         ++  +P+ ++ R   L +  +D+   +T     R   +  
Sbjct: 61  VELSNAVVEAVKKKLNKPNLQVALMPVTSQNRIPLLTNGTVDLECGSTTNNSARGKDVA- 119

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    ++ G   +  K   I   + L+  ++    GTT    +  Y    N+    ++ 
Sbjct: 120 -FAVNHFYTGTRLLAKKSSKIKDYADLAKKTVASTTGTTNAQVMRKYNADKNLGMDIVLG 178

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +      + R  A+  D   L+ L   +  P+++ ++ + +   P A  + + D  
Sbjct: 179 KDHADAFLLVESDRVVAFAMDDILLFGLIANSKNPADYEVVGESLQVEPYACMLPKDDPA 238

Query: 237 WYNIVSWTHYAMVTAEELG 255
           +  +V  T   M+ + E  
Sbjct: 239 FKKLVDDTFIDMMKSGEFE 257


>gi|145297676|ref|YP_001140517.1| ABC-type glutamine/glutamate transporter, periplasmic binding
           protein [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142850448|gb|ABO88769.1| ABC-type glutamine/glutamate transporter, periplasmic binding
           protein [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 278

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/248 (24%), Positives = 103/248 (41%), Gaps = 12/248 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNA--SILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M K   V    LI L   S +  A    L  IK R  L  G+ T    F  V   G + G
Sbjct: 1   MKKITSVLFSALIGLGLASGAAQAADGSLDKIKARDKLIVGVFTDKPPFGYVDEKGSYVG 60

Query: 59  FDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
           FD D  R  +  +  D +K++++ +    R   LQS ++D++  N   T  R     + F
Sbjct: 61  FDTDLGRRFAKDLLGDENKVEFVAVEPASRIPFLQSDKVDLILANMTVTPER--REVVDF 118

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
                      ++ +      +  L+  ++ V  GTT ++ L      ++  +  + FE+
Sbjct: 119 TNPNLRVAVQVLVPEGSPAKGLGDLADKTLIVTTGTTADIWLTR----NHPDWKVLKFEK 174

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKS-PLAPAIIQGDTEW 237
             E   A    R DAY  D   L++     + P  + +LP+ +    P+APA+ +G+ E 
Sbjct: 175 NTESLQALAQGRGDAYAQDNLVLFSWA--KENPG-YRVLPEKLGAEDPIAPAVKKGNIEL 231

Query: 238 YNIVSWTH 245
            + V+   
Sbjct: 232 RDWVNERL 239


>gi|269120152|ref|YP_003308329.1| extracellular solute-binding protein family 3 [Sebaldella
           termitidis ATCC 33386]
 gi|268614030|gb|ACZ08398.1| extracellular solute-binding protein family 3 [Sebaldella
           termitidis ATCC 33386]
          Length = 283

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/253 (23%), Positives = 106/253 (41%), Gaps = 15/253 (5%)

Query: 1   MYKDFFVSILCLIILFFTSF-------STNASILGDIKKRGFLKCGINTGLVGFAEVKAN 53
           M K  F+S++ L++             +  +  +  I+KRG L  G+ T    F  +   
Sbjct: 1   MKKLLFLSLMVLVLFVSCGNKNTDDNNAKTSGEIEKIQKRGKLIVGVFTDKPPFGFINEK 60

Query: 54  GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
            +  GFD+   +  +  +  D +KI+++P+ A  R   LQS ++DI+  N   T  RE  
Sbjct: 61  NENDGFDIALAKQFAKDLLGDENKIEFVPVEAASRVPFLQSDKVDIIMANMTVTPDREKV 120

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
             + F           + + K  I S++ L G  + V  GTT ++    +F  +      
Sbjct: 121 --VDFANPYMKVAIQILGNDKDNIKSLNDLKGKKLIVNKGTTADI----FFTKNYPDIEL 174

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           + F+   E   A +  R  A   D   LYA   T   P   ++   +   SP+APA+ +G
Sbjct: 175 LRFDHNTEAFQALKDGRGVALAHDSLLLYAWAQT--NPGFTIVNEKLEEPSPIAPAVKKG 232

Query: 234 DTEWYNIVSWTHY 246
           + E    ++    
Sbjct: 233 NNELREWINNELT 245


>gi|86150666|ref|ZP_01068887.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88596418|ref|ZP_01099655.1| CjaA protein [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218562598|ref|YP_002344377.1| putative amino-acid transporter periplasmic solute-binding protein
           [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|85838847|gb|EAQ56115.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88191259|gb|EAQ95231.1| CjaA protein [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360304|emb|CAL35100.1| putative amino-acid transporter periplasmic solute-binding protein
           [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|315930170|gb|EFV09291.1| Putative amino-acid transporter periplasmic solute-binding protein
           [Campylobacter jejuni subsp. jejuni 305]
          Length = 279

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/279 (21%), Positives = 114/279 (40%), Gaps = 16/279 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K     +   + +   +   N+       L  IK+ G ++ G+      F  V   G+
Sbjct: 1   MKKILLSVLTAFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+D+   + ++  +F D +K+Q++ + A  R   L+S ++DI+  N   T  R     
Sbjct: 61  NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAE--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G  + K   I+SV  L   ++ +  GTT +      F  +      + 
Sbjct: 119 VDFCSPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAY----FTQNYPNIKTLK 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++  E  AA    R DA + D + L+A     D P   + + ++ +K  +APA+ +GD 
Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           E    +       +   +     K  ++  K     DV+
Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268


>gi|228989782|ref|ZP_04149762.1| hypothetical protein bpmyx0001_5510 [Bacillus pseudomycoides DSM
           12442]
 gi|228769929|gb|EEM18512.1| hypothetical protein bpmyx0001_5510 [Bacillus pseudomycoides DSM
           12442]
          Length = 276

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 105/269 (39%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFS-----------TNASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL  L                 +   ++  IKKRG L  G+      F 
Sbjct: 4   MKKLFVLIVFSCLFTLIVAGCGKETSKEVSKETSGGKVVDQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                 G  +GFDVD  +AL+  I  D SK+++  + +K R   L++  ID +      T
Sbjct: 64  LKDPATGKVEGFDVDIAKALAKKILGDESKVEFKEVTSKTRIPMLKNGDIDTIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G ++    G+T+   + +    
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSKIKSIDDVKSGVTVLAVKGSTSTQNIREKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 AK----VLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDAN---YQVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G T+   +++     M    E  
Sbjct: 235 GIAVQKGATDLTKVINDLLKEMKANGEYD 263


>gi|86151024|ref|ZP_01069240.1| bacterial extracellular solute-binding proteins, family 3
           [Campylobacter jejuni subsp. jejuni 260.94]
 gi|148926105|ref|ZP_01809791.1| putative amino-acid transporter periplasmic solute-binding protein
           [Campylobacter jejuni subsp. jejuni CG8486]
 gi|85842194|gb|EAQ59440.1| bacterial extracellular solute-binding proteins, family 3
           [Campylobacter jejuni subsp. jejuni 260.94]
 gi|145845584|gb|EDK22676.1| putative amino-acid transporter periplasmic solute-binding protein
           [Campylobacter jejuni subsp. jejuni CG8486]
 gi|284926212|gb|ADC28564.1| putative amino-acid transporter periplasmic solute-binding protein
           [Campylobacter jejuni subsp. jejuni IA3902]
          Length = 279

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/279 (21%), Positives = 114/279 (40%), Gaps = 16/279 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K     +   + +   +   N+       L  IK+ G ++ G+      F  V   G+
Sbjct: 1   MKKILLSVLTAFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+D+   + ++  +F D +K+Q++ + A  R   L+S ++DI+  N   T  R     
Sbjct: 61  NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAE--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G  + K   I+SV  L   ++ +  GTT +      F  +      + 
Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAY----FTQNYPNIKTLK 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++  E  AA    R DA + D + L+A     D P   + + ++ +K  +APA+ +GD 
Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           E    +       +   +     K  ++  K     DV+
Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268


>gi|86152552|ref|ZP_01070757.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85843437|gb|EAQ60647.1| surface antigen, CjaA [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 279

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 59/279 (21%), Positives = 114/279 (40%), Gaps = 16/279 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K     +   + +   +   N+       L  IK+ G ++ G+      F  V   G+
Sbjct: 1   MKKILLSVLTTFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+D+   + ++  +F D +K+Q++ + A  R   L+S ++DI+  N   T  R     
Sbjct: 61  NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPERAE--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G  + K   I+SV  L   ++ +  GTT +      F  +      + 
Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAY----FTQNYPNIKTLK 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++  E  AA    R DA + D + L+A     D P   + + ++ +K  +APA+ +GD 
Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           E    +       +   +     K  ++  K     DV+
Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268


>gi|228995972|ref|ZP_04155628.1| hypothetical protein bmyco0003_5680 [Bacillus mycoides Rock3-17]
 gi|229003589|ref|ZP_04161405.1| hypothetical protein bmyco0002_5620 [Bacillus mycoides Rock1-4]
 gi|228757631|gb|EEM06860.1| hypothetical protein bmyco0002_5620 [Bacillus mycoides Rock1-4]
 gi|228763745|gb|EEM12636.1| hypothetical protein bmyco0003_5680 [Bacillus mycoides Rock3-17]
          Length = 276

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 107/269 (39%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFS-----------TNASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL  L                 +   ++  IKKRG L  G+      F 
Sbjct: 4   MKKLFVLIVFSCLFTLIVAGCGKETSKEVSKETSGGKVVDQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKA-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                 G  +GFDVD  +AL+  I  D SK+++  + +K R   L++  ID +      T
Sbjct: 64  LKDPATGKVEGFDVDIAKALAKKILGDESKVEFKEVTSKTRIPMLKNGDIDTIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G ++    G+T+   +    + 
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSKIKSIDDVKSGVTVLAVKGSTSTQNI----RK 177

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
            + +   + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 178 KSPEAKVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDAN---YQVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G T+   +++     M    E  
Sbjct: 235 GIAVQKGATDLTKVINDLLKEMKANGEYD 263


>gi|224824035|ref|ZP_03697143.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
 gi|224603454|gb|EEG09629.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
          Length = 301

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 93/255 (36%), Gaps = 6/255 (2%)

Query: 5   FFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFC 64
              + L +I+      +  +  L  IK+ G +  G     + F+ + ++    G+  +  
Sbjct: 8   MSAAALAVIVAHPAFAAGESGTLKKIKESGTIVLGYRDSSIPFSYLGSDQKPIGYSWEIA 67

Query: 65  RALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
            A+   +  +      +++   + ++ R   +Q+  +D+   +T     R     + F  
Sbjct: 68  NAVVERVKKELNMPNLEVKTNLVTSQTRIPLVQNGTVDLECGSTTNNPER--QQQIDFSV 125

Query: 121 ITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVE 180
             +      +  K  GI     L G ++ V AG+T+E  L        M  + I  + + 
Sbjct: 126 GYFSASTRLLTRKTSGIKEFPDLKGKNVVVTAGSTSERLLRAMNAEKQMSMNVISAKDIG 185

Query: 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNI 240
           E      + R  AY  D   L      +  P E V+     S       + +GD E+  +
Sbjct: 186 ESFLMLESGRSAAYMVDDVLLAGEIAKSKNPDEWVVTGKPQSFENYGCMMRKGDPEFKKV 245

Query: 241 VSWTHYAMVTAEELG 255
           V  T   +  + E+ 
Sbjct: 246 VDETIKGLFKSGEIN 260


>gi|261404399|ref|YP_003240640.1| family 3 extracellular solute-binding protein [Paenibacillus sp.
           Y412MC10]
 gi|329929709|ref|ZP_08283395.1| putative major cell-binding factor [Paenibacillus sp. HGF5]
 gi|261280862|gb|ACX62833.1| extracellular solute-binding protein family 3 [Paenibacillus sp.
           Y412MC10]
 gi|328935926|gb|EGG32385.1| putative major cell-binding factor [Paenibacillus sp. HGF5]
          Length = 269

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 56/266 (21%), Positives = 110/266 (41%), Gaps = 20/266 (7%)

Query: 1   MYKDF---------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M + F          ++++ ++I      S +   L  IKKRG L  G+      F    
Sbjct: 1   MKRRFTGTFRWSAALLALVIMLIASGCGGSGSTDTLEAIKKRGKLVAGVKYDTKLFGLQD 60

Query: 52  A-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              G+ +GFD+D  +AL+  I  D +K++   + +K R   L++  IDI+      T  R
Sbjct: 61  PATGNVEGFDIDIAKALAKKILGDETKVELKEVTSKTRIDMLKNGDIDIIIATMTITEER 120

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS-ICVQAGTTTELTLADYFKAHNM 169
           +    + F  + +  GQ  ++ K   I+ +  L+  + +    G+T+   + +       
Sbjct: 121 KE--QVDFSDVYFEAGQSLLVKKGSPITGLESLNKDTKVLTVKGSTSAQNIREKAP---- 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               + FE  ++   A +A + DA T D S L  ++  +       ++    +  P   A
Sbjct: 175 DAVILEFENYQDAFTALKAGQGDALTTDNSILLGMQQQDP---SFELVGGNFTDEPYGMA 231

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255
           I +G+ E+   V+     +  + E  
Sbjct: 232 IKKGNPEFVKTVNELLKELKDSGEYD 257


>gi|332179316|gb|AEE15005.1| ABC-type transporter, periplasmic subunit family 3
           [Thermodesulfobium narugense DSM 14796]
          Length = 270

 Score =  169 bits (429), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 60/258 (23%), Positives = 102/258 (39%), Gaps = 20/258 (7%)

Query: 1   MY--KDFFVSILCLIILFFTSFSTNASI----------LGDIKKRGFLKCGINTGLVGFA 48
           M   K  F+  + L+       S  A            +  IK RG L  G+   +  F 
Sbjct: 1   MKNLKFLFLGFIVLLGFVIAGCSQQAQKPQESSAVPPDIKAIKDRGVLNVGVKYDVPKFG 60

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
                 G  +GF++D    ++  I  +P K+  + +  K R   L + ++D++      T
Sbjct: 61  YKDPKTGKVEGFEIDIAHEMAKKILGNPDKVNLIAVTPKTRGPLLDNGEVDMVIATFTIT 120

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAH 167
             RE      F    + DG   ++ K  GI S + L+G ++ V    TT+  +    KA 
Sbjct: 121 PEREK--SFNFSIPYFTDGVALLVKKDSGIKSFTDLNGKTVGVAQSATTKGAIEAEAKAK 178

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
            +K + + F    EI AA  + R  A++ D + LY             ILPD  +     
Sbjct: 179 GIKVNVLEFASYPEIKAALESGRVQAFSTDGAILYGYL-----DDSTTILPDRFAPQNYG 233

Query: 228 PAIIQGDTEWYNIVSWTH 245
            A+ +G+     +V+ T 
Sbjct: 234 IAMKKGNDGLLKLVNSTL 251


>gi|57237809|ref|YP_179057.1| surface antigen, CjaA [Campylobacter jejuni RM1221]
 gi|205356696|ref|ZP_03223457.1| putative amino-acid transporter periplasmic solute binding protein
           [Campylobacter jejuni subsp. jejuni CG8421]
 gi|57166613|gb|AAW35392.1| surface antigen, CjaA [Campylobacter jejuni RM1221]
 gi|205345434|gb|EDZ32076.1| putative amino-acid transporter periplasmic solute binding protein
           [Campylobacter jejuni subsp. jejuni CG8421]
 gi|315058426|gb|ADT72755.1| Putative amino-acid transporter periplasmic solute-binding protein
           [Campylobacter jejuni subsp. jejuni S3]
          Length = 279

 Score =  169 bits (429), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 59/279 (21%), Positives = 114/279 (40%), Gaps = 16/279 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K     +   + +   +   N+       L  IK+ G ++ G+      F  V   G+
Sbjct: 1   MKKILLSVLTTFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+D+   + ++  +F D +K+Q++ + A  R   L+S ++DI+  N   T  R     
Sbjct: 61  NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAE--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G  + K   I+SV  L   ++ +  GTT +      F  +      + 
Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAY----FTQNYPNIKTLK 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++  E  AA    R DA + D + L+A     D P   + + ++ +K  +APA+ +GD 
Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           E    +       +   +     K  ++  K     DV+
Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268


>gi|153951094|ref|YP_001397935.1| CjaA protein [Campylobacter jejuni subsp. doylei 269.97]
 gi|152938540|gb|ABS43281.1| CjaA protein [Campylobacter jejuni subsp. doylei 269.97]
          Length = 279

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 59/279 (21%), Positives = 114/279 (40%), Gaps = 16/279 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K     +   + +   +   N+       L  IK+ G ++ G+      F  V   G+
Sbjct: 1   MKKILLSVLTAFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+D+   + ++  +F D +K+Q++ + A  R   L+S ++DI+  N   T  R     
Sbjct: 61  NQGYDIVLAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTETPQRAE--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G  + K   I+SV  L   ++ +  GTT +      F  +      + 
Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAY----FTQNYPDIKTLK 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++  E  AA    R DA + D + L+A     D P   + + ++ +K  +APA+ +GD 
Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           E    +       +   +     K  ++  K     DV+
Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268


>gi|52144760|ref|YP_082068.1| amino acid ABC transporter, periplasmic solute-binding protein
           [Bacillus cereus E33L]
 gi|51978229|gb|AAU19779.1| amino acid ABC transporter, periplasmic solute-binding protein
           [Bacillus cereus E33L]
          Length = 286

 Score =  169 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 104/256 (40%), Gaps = 19/256 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN-----------ASILGDIKKRGFLKCGINTGLVGFAE 49
           M K     I+ L+ +   +  +N           +  +  IK+RG L   + T    F  
Sbjct: 1   MKKLLTFIIIGLLSILVVACGSNEKKTEKTSAKPSGKIEQIKERGELVVAVFTDKPPFGY 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V  +G   GF++D  +  +  +  D SK++++P+ A  R   LQS ++D +  N   T  
Sbjct: 61  VDKDGKNVGFEIDMAKRFAKDLLGDESKVKFVPVEAASRIPYLQSDKVDFVLANMTATDE 120

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R+    + F           ++     I SV  L G  + V  GTT ++ L    K    
Sbjct: 121 RKKV--VDFTNPHLKVAVQVLVKDGSPIQSVKDLEGKKVIVTKGTTADIYLTKNMK---- 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               I F++  E   A +  R DAY  D   L +    N  P  H++   +     +A A
Sbjct: 175 NVELIKFDKNTEALQALKDGRADAYAQDNLVLLSWA--NKNPGFHLLKDKLGGDDLIAIA 232

Query: 230 IIQGDTEWYNIVSWTH 245
           + +G+ E ++ V+   
Sbjct: 233 VKKGNKEIHDWVNKEL 248


>gi|121612178|ref|YP_001000662.1| CjaA protein [Campylobacter jejuni subsp. jejuni 81-176]
 gi|167005588|ref|ZP_02271346.1| CjaA protein [Campylobacter jejuni subsp. jejuni 81-176]
 gi|71532927|emb|CAJ20048.1| glutamine-binding protein [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|87249126|gb|EAQ72087.1| CjaA protein [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 279

 Score =  169 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 58/279 (20%), Positives = 113/279 (40%), Gaps = 16/279 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K     +   + +   +   N+       L  IK+ G ++ G+      F  V   G+
Sbjct: 1   MKKILLSVLTTFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+D+   + ++  +F D +K+Q++ + A  R   L+S ++DI+  N   T  R     
Sbjct: 61  NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPERAE--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G  + K   I+SV  L   ++ +  GTT +      +         + 
Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAYFTQDYP----NIKTLK 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++  E  AA    R DA + D + L+A     D P   + + ++ +K  +APA+ +GD 
Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           E    +       +   +     K  ++  K     DV+
Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268


>gi|56478019|ref|YP_159608.1| putative ABC transporter, glutamate receptor [Aromatoleum
           aromaticum EbN1]
 gi|56314062|emb|CAI08707.1| putative ABC transporter, glutamate receptor [Aromatoleum
           aromaticum EbN1]
          Length = 298

 Score =  169 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 101/261 (38%), Gaps = 8/261 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFS--TNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKG 58
           M+K   V  LCL      + +   ++  L  IK  G +  G     V F+ + AN    G
Sbjct: 1   MHKSLTVIALCLSAAGMVAPAHAQSSGTLQKIKDTGTITVGHRESSVPFSYLDANQKPVG 60

Query: 59  FDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
           + +D C  +  A+  +      +++Y P+ ++ R   +Q+  ID+   +T  ++ R+  +
Sbjct: 61  YAMDLCAKVVDAVKTELKMPNLQVKYQPVTSQNRIPLMQNGTIDLECGSTTNSVARQQQV 120

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
           G  F    +       + K  GI  +  L G  +    GTT++  +    K   +    I
Sbjct: 121 G--FSVAYFITSVRMGVRKDSGIDDIGDLDGKPVVTTTGTTSDELIKQNEKGRTINVKNI 178

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
             +   +      + R  A+  D   L  L   +  PS   I+   +   P    + + D
Sbjct: 179 YGKDHADSFLMVDSGRAAAFVMDDILLAGLIANSKNPSAFEIVGPSLRDEPYGVMVRKDD 238

Query: 235 TEWYNIVSWTHYAMVTAEELG 255
             +  IV  T   ++ + E  
Sbjct: 239 APFKAIVDKTLVGLMKSGEAE 259


>gi|1930092|gb|AAB51532.1| outer membrane protein [Campylobacter jejuni]
          Length = 279

 Score =  169 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 58/279 (20%), Positives = 113/279 (40%), Gaps = 16/279 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K     +   + +   +   N+       L  IK+ G ++ G+      F  V   G+
Sbjct: 1   MKKILLSVLTTFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+D+   + ++  +F D +K+Q++ + A  R   L+S ++DI+  N   T  R     
Sbjct: 61  NQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPERAE--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G  + K   I+SV  L   ++ +  GTT +      +         + 
Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLIDKTLLLNKGTTADAYFTQDYP----NIKTLK 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++  E  AA    R DA + D + L+A     D P   + + ++ +K  +APA+ +GD 
Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAW--VKDHPDFKMGIKELGNKDVIAPAVKKGDK 232

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           E    +       +   +     K  ++  K     DV+
Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYDETLKAHFGDDVK 268


>gi|324324589|gb|ADY19849.1| amino acid ABC transporter, periplasmic solute-binding protein
           [Bacillus thuringiensis serovar finitimus YBT-020]
          Length = 286

 Score =  168 bits (426), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 59/256 (23%), Positives = 104/256 (40%), Gaps = 19/256 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN-----------ASILGDIKKRGFLKCGINTGLVGFAE 49
           M K     ++ L+ +   +  +N           +  +  IK+RG L   + T    F  
Sbjct: 1   MKKLLTFIMIGLLSILVVACGSNEKKTEKTSAKPSGKIEQIKERGELVVAVFTDKPPFGY 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V  +G   GF++D  +  +  +  D SK++++P+ A  R   LQS ++D +  N   T  
Sbjct: 61  VDKDGKNVGFEIDMAKRFAKDLLGDESKVKFVPVEAASRIPYLQSDKVDFVLANMTATDE 120

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R+    + F           ++     I SV  L G  + V  GTT ++ L    K    
Sbjct: 121 RKKV--VDFTNPHLKVAVQVLVKDGSPIQSVKDLEGKKVIVTKGTTADIYLTKNMK---- 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               I F++  E   A +  R DAY  D   L +    N  P  H++   +     +A A
Sbjct: 175 NVELIKFDKNTEALQALKDGRADAYAQDNLVLLSWA--NKNPGFHLLKDKLGGDDLIAIA 232

Query: 230 IIQGDTEWYNIVSWTH 245
           + +G+ E ++ V+   
Sbjct: 233 VKKGNKEVHDWVNKEL 248


>gi|322421250|ref|YP_004200473.1| family 3 extracellular solute-binding protein [Geobacter sp. M18]
 gi|320127637|gb|ADW15197.1| extracellular solute-binding protein family 3 [Geobacter sp. M18]
          Length = 271

 Score =  168 bits (426), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 93/256 (36%), Gaps = 11/256 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANG-DWKGF 59
           M K   +     ++      +     L D+KK+G L  G+   L  F  V     +  G+
Sbjct: 1   MKKLMTLFAAMALVGIMAHAALAGDTLADVKKKGVLVAGVKDSLPPFGYVDEKSREIVGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+DF + ++  +      ++  P+ +  R   L    IDI++        R     + F 
Sbjct: 61  DIDFVKYIAKKLGVK---VELKPVTSASRMPQLMEGNIDIIAATMTKNPERAK--QIDFS 115

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              +  GQ FI  K   + S+  L G  I    G+T+E  +A            + F+  
Sbjct: 116 HTYFLTGQKFITKKG-AVKSLKDLEGKKIGTAKGSTSEQNVAKAIPTA----TVLSFDDY 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +   A +  +  A T D S L  +       ++  I    IS+ P    + + D  +  
Sbjct: 171 PQAFLALQQGKVAAVTTDESILAGILGKAPNKNKFEIPNLQISEEPYGLGMRKDDKNFVA 230

Query: 240 IVSWTHYAMVTAEELG 255
            V+ T   M    E  
Sbjct: 231 FVNKTLLEMEKNGEAK 246


>gi|319792374|ref|YP_004154014.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
 gi|315594837|gb|ADU35903.1| extracellular solute-binding protein family 3 [Variovorax paradoxus
           EPS]
          Length = 296

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 97/259 (37%), Gaps = 6/259 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M     ++ +   +LF  + +  A  L  I + G +        V F+ +       GF 
Sbjct: 1   MKLSVLMASMAAAVLFTATGAQAADTLAKIAESGKITLAYRESSVPFSYLDGPNKPIGFS 60

Query: 61  VDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           V+   A+  A+         ++  + + ++ R   + +  +D+   +T     R   +  
Sbjct: 61  VELSNAVVEAVKKKLNKPNLQVSLMAVTSQNRIPLITNGTVDLECGSTTNNTARGKDVA- 119

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F    ++ G   +  K   I   + L+  ++    GTT  L +  Y    N+    ++ 
Sbjct: 120 -FAVNHFYTGTRLLTKKSSKIKDYADLAKKTVASTTGTTNALVMRKYNTEKNLGMDIVLG 178

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   +      + R  A+  D   L+ L   +  P+++ ++ + +   P A  + + D  
Sbjct: 179 KDHADAFLLVESDRAVAFAMDDILLFGLIANSKNPADYEVVGESLQVEPYACMLPKDDPA 238

Query: 237 WYNIVSWTHYAMVTAEELG 255
           +  +V  T   M+ + E  
Sbjct: 239 FKKLVDDTFIGMMKSGEFE 257


>gi|229541938|ref|ZP_04430998.1| extracellular solute-binding protein family 3 [Bacillus coagulans
           36D1]
 gi|229326358|gb|EEN92033.1| extracellular solute-binding protein family 3 [Bacillus coagulans
           36D1]
          Length = 271

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 53/267 (19%), Positives = 103/267 (38%), Gaps = 22/267 (8%)

Query: 2   YKDFFVSILCLIILFFTSF-----------STNASILGDIKKRGFLKCGINTGLVGFAEV 50
            K     ++ ++     +            S +   +  I+ RG L  G+      F   
Sbjct: 5   KKWLAAGLVFILAAALVAGCGKSKSTGGSGSASDDPIKKIEDRGKLVVGVKYDTYLFGYK 64

Query: 51  KAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
               G+ +GFDVD  +A+S  IF D  K++   + +K R   LQ+  +D++         
Sbjct: 65  DPKTGNVEGFDVDIAKAISKKIFGDKVKVELKEVTSKTRIPMLQNGDVDMVVATMTI--S 122

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHN 168
            +    + F  + +  GQ  ++ K   I SV  L  G  +    G T+   +    +   
Sbjct: 123 PDRKKVVDFSDVYFDAGQSLLVKKGSKIKSVKDLTKGTKVLTVKGATSGDNV----RKAA 178

Query: 169 MKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAP 228
                + +E  +E   A ++ + DA T D S LY +   +     + ++    +K P   
Sbjct: 179 PDTTVLEYENYQEAFTALKSGKGDALTTDNSILYGMAAQDSN---YQVVGGTFTKEPYGI 235

Query: 229 AIIQGDTEWYNIVSWTHYAMVTAEELG 255
           A+ +G+T+    V+     +  + E  
Sbjct: 236 AMKKGNTKLVKAVNKALKELKDSGEYD 262


>gi|222823699|ref|YP_002575273.1| amino acid ABC transporter, periplasmic solute-binding lipoprotein
           [Campylobacter lari RM2100]
 gi|222538921|gb|ACM64022.1| amino acid ABC transporter, periplasmic solute-binding lipoprotein
           [Campylobacter lari RM2100]
          Length = 275

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 113/246 (45%), Gaps = 9/246 (3%)

Query: 1   MYKDFFVSIL-CLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGF 59
           M K F +S L  L     ++  +N + +  IK++G ++ G+      F  + A G  +G+
Sbjct: 1   MKKIFLLSFLMALFFGACSNSGSNENSIEKIKQQGVIRIGVFGDKPPFGYLDAQGKNQGY 60

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           DV F + ++  +  D SKIQ++ + A  R   LQS ++D++  N   T  RE+   + F 
Sbjct: 61  DVYFAKRIAKELLGDESKIQFVLVEAANRVEFLQSNKVDLILANFTKTPEREVV--VDFA 118

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
                   G +  K   I ++  L   ++ +  GTT +      F  +  +   I F++ 
Sbjct: 119 LPYMKVALGVVAPKNSDIKTIDDLKSKTLILNKGTTADAY----FTKNMPEIKTIKFDQN 174

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            E  AA    R DA + D + L+A     + P+  V++ ++ +   +APA+ +GD     
Sbjct: 175 TETFAALIGKRGDALSHDNALLFAWA--KENPNFEVVIKELGNHDVIAPAVKKGDEAMLK 232

Query: 240 IVSWTH 245
            ++   
Sbjct: 233 FINNLI 238


>gi|283954532|ref|ZP_06372051.1| CjaA protein [Campylobacter jejuni subsp. jejuni 414]
 gi|283793936|gb|EFC32686.1| CjaA protein [Campylobacter jejuni subsp. jejuni 414]
          Length = 279

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 62/279 (22%), Positives = 115/279 (41%), Gaps = 16/279 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASI-----LGDIKKRGFLKCGINTGLVGFAEVKANGD 55
           M K     +   + +   +   N+       L +IK+ G ++ G+      F  V   G+
Sbjct: 1   MKKILLSVLTAFVAVVLAACEGNSDSKTLNSLDEIKQNGVVRIGVFGDKPPFGYVDEKGN 60

Query: 56  WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLG 115
            +G+DV   + ++  +F D +K+Q++ + A  R   L+S ++DI+  N   T  R     
Sbjct: 61  NQGYDVVLAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAE--Q 118

Query: 116 LAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIV 175
           + F         G  + K   I+SV  L    + +  GTT +      F  +      + 
Sbjct: 119 VDFCLPYMKVALGVAVPKDSNITSVEDLKDKILLLNKGTTADAY----FTQNYPNIKTLK 174

Query: 176 FERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDT 235
           +++  E  AA    R DA + D + L+A     D P   + + ++ +K  +APA+ +GD 
Sbjct: 175 YDQNTETFAALMDKRGDALSHDNTLLFAWI--KDHPDFKMGIKELGNKDVIAPAVKKGDK 232

Query: 236 EWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
           E    +       +   +     K  N+  KD    DV+
Sbjct: 233 ELKEFIDNLI---IKLGQEQFFHKAYNETLKDHFGDDVK 268


>gi|330429988|gb|AEC21322.1| amino-acid ABC transporter binding protein precursor [Pusillimonas
           sp. T7-7]
          Length = 299

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 52/253 (20%), Positives = 94/253 (37%), Gaps = 7/253 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K        L ++       +   L  IK  G +  G     + F+ +       G+ 
Sbjct: 1   MKKTTITLFTALAVVATAPVYADG-RLEKIKSSGEIALGHRDSSIPFSYLDDKQQPIGYS 59

Query: 61  VDFCR----ALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGL 116
           +D C+    A+   +  D   ++ +P+ +  R   L +  +D+   ++  T  R+    +
Sbjct: 60  MDICKNIVEAVKEKLGMDKLNVKMVPVTSSTRIPLLANGTVDLNCGSSTNTKERQA--QV 117

Query: 117 AFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVF 176
            F P T+     F+  K   I+S+  L G ++   AGT+             +  + I  
Sbjct: 118 TFAPTTFVTATRFVAKKSSNINSLEDLKGKTVISTAGTSNIRWATGANDQQKLGMNIIPA 177

Query: 177 ERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTE 236
           +   E        R  A+  D   L  L  T+  PSE +I  D  +  P A    + D E
Sbjct: 178 KDHAEALLTVNNGRAAAFFMDDILLAGLVATSRDPSEWMISKDAYTVEPYAIMEPKDDPE 237

Query: 237 WYNIVSWTHYAMV 249
           +  +V  T   M+
Sbjct: 238 FKKVVDDTIKGMM 250


>gi|42779689|ref|NP_976936.1| glutamine ABC transporter, glutamine-binding protein [Bacillus
           cereus ATCC 10987]
 gi|42735606|gb|AAS39544.1| glutamine ABC transporter, glutamine-binding protein [Bacillus
           cereus ATCC 10987]
          Length = 286

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 59/256 (23%), Positives = 105/256 (41%), Gaps = 19/256 (7%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN-----------ASILGDIKKRGFLKCGINTGLVGFAE 49
           M K     I+ L+ +   +  +N           +  + +IK+RG L   + T    F  
Sbjct: 1   MKKFLTFIIIGLLSILVVACGSNEKKTEKTSAKPSGKIEEIKERGELVVAVFTDKPPFGY 60

Query: 50  VKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLL 109
           V  +G   GF++D  +  +  +  D SK++++P+ A  R   LQS ++D +  N   T  
Sbjct: 61  VDKDGKNVGFEIDMAKRFAKDLLGDESKVKFVPVEAASRIPYLQSDKVDFVLANMTATDE 120

Query: 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNM 169
           R+    + F           ++     I SV  L G  + V  GTT ++ L    K    
Sbjct: 121 RKKV--VDFTNPHLKVAVQVLVKDGSPIQSVKDLEGKKVIVTKGTTADIYLTKNMK---- 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               I F++  E   A +  R D+Y  D   L +    N  P  H++   +     +A A
Sbjct: 175 NVELIKFDKNTEALQALKDGRADSYAQDNLVLLSWA--NKNPGFHLLKDKLGGDDLIAIA 232

Query: 230 IIQGDTEWYNIVSWTH 245
           + +G+ E ++ V+   
Sbjct: 233 VKKGNKEVHDWVNKEL 248


>gi|300856477|ref|YP_003781461.1| putative amino acid ABC transporter periplasmic solute-binding
           protein [Clostridium ljungdahlii DSM 13528]
 gi|300436592|gb|ADK16359.1| predicted ABC-type aminoacid transporter, periplasmic
           solute-binding component [Clostridium ljungdahlii DSM
           13528]
          Length = 268

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 87/254 (34%), Gaps = 13/254 (5%)

Query: 1   MYKDF--FVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANG 54
           M K       ++ L+ +  T        +     DIK +G    G++            G
Sbjct: 1   MKKKLGILTLVIFLLGIILTGCGQGQKSSDKSWDDIKSKGQFVVGLDDSFPPMGFRDEKG 60

Query: 55  DWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISL 114
              GFD+D  +A +  +      + + P+      L+L +K ID++      T  R+  +
Sbjct: 61  QIVGFDIDMAKAAAQKMGVK---VVFKPVEWDGIILSLNNKDIDVIWNGLTITDKRKKQI 117

Query: 115 GLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPI 174
              F  +   + Q  ++     I +   LSG ++ +Q G+++E  L           +  
Sbjct: 118 A--FSKVYLQNKQIIVVRNDSNIKNKKDLSGKTVGLQMGSSSETALNSDAATAKSLKNIR 175

Query: 175 VFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234
            +    E        R DA   D   +        +P  + IL D   K      I + D
Sbjct: 176 KYSNNTEALLDLNQGRIDAVVVDE--VVGRYYLQKKPGLYKILEDNFGKEDYGVGIRKSD 233

Query: 235 TEWYNIVSWTHYAM 248
             +   +     +M
Sbjct: 234 ESFKEKLDEALDSM 247


>gi|294637494|ref|ZP_06715780.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Edwardsiella tarda
           ATCC 23685]
 gi|291089326|gb|EFE21887.1| glutamate/aspartate ABC transporter, periplasmic
           glutamate/aspartate-binding protein [Edwardsiella tarda
           ATCC 23685]
          Length = 300

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 95/253 (37%), Gaps = 10/253 (3%)

Query: 1   MYKDFFVSILCLIILFFTS----FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M+K      L  + L   +     + +++ L  IK+ G +  G     V F+        
Sbjct: 1   MHKSVLTMALLALSLPLYAVADNGAADSATLAKIKQNGVIVVGHRESSVPFSYYDNKQQV 60

Query: 57  KGFDVDFCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREI 112
            G+  D+  A+ +A+         +++ LP+ ++ R   LQ+   D    +T     R  
Sbjct: 61  VGYSQDYSNAIVAAVKKQLGLPNLQVKLLPITSQNRIPLLQNGTYDFECGSTTHNAER-- 118

Query: 113 SLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172
              +AF    +  G   +  K  G+     L+G  + V +GTT+E+ L    +   MK  
Sbjct: 119 QQQVAFSNTLFIVGTRLLTAKDSGVHDFRDLAGKPVVVTSGTTSEILLNRMNEKEGMKMR 178

Query: 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQ 232
            I  +   +      + R  A+  D + L   +    +P   VI+    S       + +
Sbjct: 179 IISAKDHGDAFRTLESGRAVAFMMDDALLAGERAKAKQPERWVIVGTPQSYEAYGCMLRK 238

Query: 233 GDTEWYNIVSWTH 245
            D  +  +V  T 
Sbjct: 239 DDPAFKKLVDDTI 251


>gi|152974368|ref|YP_001373885.1| extracellular solute-binding protein [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152023120|gb|ABS20890.1| extracellular solute-binding protein family 3 [Bacillus cytotoxicus
           NVH 391-98]
          Length = 275

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 59/268 (22%), Positives = 104/268 (38%), Gaps = 22/268 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSF----------STNASILGDIKKRGFLKCGINTGLVGFAE 49
           M K F  +  +CL  L               ST+  ++  IKKRG L  G+      F  
Sbjct: 4   MKKWFTLIVFVCLFTLIVAGCGNKQEEAKETSTSGGVVEQIKKRGKLVVGVKNDTNLFGL 63

Query: 50  VKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTL 108
              + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T 
Sbjct: 64  KNPSTGQVEGFDVDMAKALAKRILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTITE 123

Query: 109 LREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAH 167
            R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +       
Sbjct: 124 ERKK--EVDFSDVYFKAGQSLLVKKGSDIKSIDDVKKGVKVLAVKGSTSTQNVRQKAPEA 181

Query: 168 NMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLA 227
                 + FE   E   A +A + D  T D + LY +   +     + ++  I +  P  
Sbjct: 182 ----TVLEFENYSEAFTALKAGQGDVLTTDNAILYGMAKQDAN---YEVVGKIFTNEPYG 234

Query: 228 PAIIQGDTEWYNIVSWTHYAMVTAEELG 255
            A+ +G T+    ++     +    E  
Sbjct: 235 IAVQKGATDLTKEINDLLKEIKENGEYD 262


>gi|317153800|ref|YP_004121848.1| family 3 extracellular solute-binding protein [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316944051|gb|ADU63102.1| extracellular solute-binding protein family 3 [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 268

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 102/249 (40%), Gaps = 11/249 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGD-WKGF 59
           M +   V  L L  +F  + + NA  + D+K RG L CG+   +  F  V  +     G 
Sbjct: 1   MKRLIVVLALVLSFVFGVA-AANAGKIEDVKARGVLVCGVKDSVNLFGFVDPDTKELVGL 59

Query: 60  DVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFR 119
           D+D C+ ++  +        +  + +  R   L    +DIL+        R+    + F 
Sbjct: 60  DIDVCKYIADKLGVKTE---FKVVTSSNRIPMLVQGSVDILAATMTHKFSRDE--QIDFS 114

Query: 120 PITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERV 179
              + DGQ  ++ K  GI S + L+   +    G+T+E  + +   A       I ++  
Sbjct: 115 ITYFMDGQKLLVEKGAGIKSTADLANKKVGTVKGSTSEKNIKNAQPA----SQVISYDEY 170

Query: 180 EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYN 239
            +   A +  +  A T D   L  LK  +D P +  I+ +  +  P    + + D+++ +
Sbjct: 171 PQAFMALKQGKVVAVTTDSGILAGLKAGDDNPDKWEIVGEFFASEPYGLGVPENDSKFRD 230

Query: 240 IVSWTHYAM 248
            V+     M
Sbjct: 231 FVNLCLNEM 239


>gi|224826757|ref|ZP_03699857.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
 gi|224600977|gb|EEG07160.1| extracellular solute-binding protein family 3 [Lutiella nitroferrum
           2002]
          Length = 301

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 93/257 (36%), Gaps = 6/257 (2%)

Query: 3   KDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVD 62
           +    + +  ++      +     L  IK  G +  G     + F+ +  N    G+ +D
Sbjct: 6   RLICTATVGALLAAPAMSAELTGTLKKIKDSGTIVIGHRDASIPFSYLDNNQQPIGYSMD 65

Query: 63  FCRALSSAIFDD----PSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAF 118
               +  A+  D      K+QY  + ++ R   +Q+  +DI   +T   L R+    + F
Sbjct: 66  IAHKVVEAVKKDLKMPGLKVQYNLVTSQTRIPLVQNGTVDIECGSTTNNLERQK--QVDF 123

Query: 119 RPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
               +  G   +  K  GI     L G ++   AGTT+E  +        M  + I  + 
Sbjct: 124 SVGIFEIGTRLLTKKTSGIKDFPDLKGKNVVTTAGTTSERLIKAMNAEKQMGMNIISAKD 183

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             E      + R  A+  D   LY   +    P+E V+     S       + +GD  + 
Sbjct: 184 HGESFLMAESGRAVAFMMDDVLLYGEMVKARNPAEWVVTGKPQSFEIYGCMMRKGDPAFK 243

Query: 239 NIVSWTHYAMVTAEELG 255
            +V     A   + E+ 
Sbjct: 244 KVVDDAIKATYKSGEIN 260


>gi|154249737|ref|YP_001410562.1| extracellular solute-binding protein [Fervidobacterium nodosum
           Rt17-B1]
 gi|154153673|gb|ABS60905.1| extracellular solute-binding protein family 3 [Fervidobacterium
           nodosum Rt17-B1]
          Length = 250

 Score =  166 bits (419), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 95/257 (36%), Gaps = 17/257 (6%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K  F +++  ++L   + ++ A  L  IK+RG L  G       F  V       GFD
Sbjct: 1   MKK--FFTMVIAVLLVVLTVTSFAQTLTQIKQRGKLIVGTEPTFPPFEFVDEKNQVVGFD 58

Query: 61  VDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRP 120
           +D    L+  +      ++ + L       ALQ  +ID+       T  R     + F  
Sbjct: 59  IDIAMELAKRLGVK---LEIVSLPFDSLIPALQQGKIDLAIAGMTITKERAKV--VDFSK 113

Query: 121 ITYFDGQGFIMHKKKGI--SSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFER 178
             +   Q  ++ K        +  L G  + VQ GTT +L ++D         + + F++
Sbjct: 114 PYFEANQAIVVRKDSKFEPKKLEDLVGQKVAVQLGTTGDLVVSDI-----TGINVVRFQK 168

Query: 179 VEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWY 238
             +     +  R DA   D +   A      +     I   + +      A+ +G+ E  
Sbjct: 169 FTDAFLELQNGRVDAVVLDEAPAKAYVKKFSK---FSISSIVDTGETYGIAVKKGNKELL 225

Query: 239 NIVSWTHYAMVTAEELG 255
           N V+ T   M  + +  
Sbjct: 226 NFVNQTLDIMKGSGQYN 242


>gi|229101400|ref|ZP_04232144.1| hypothetical protein bcere0019_5790 [Bacillus cereus Rock3-28]
 gi|228682105|gb|EEL36238.1| hypothetical protein bcere0019_5790 [Bacillus cereus Rock3-28]
          Length = 276

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 102/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDDVKETNTKQGGAIEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSIDDIKQGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDAN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             AI +G  +    ++     M T+ E  
Sbjct: 235 GIAIQKGADDLTKEINNLLKDMKTSGEYD 263


>gi|321312269|ref|YP_004204556.1| glutamine ABC transporter glutamine-binding lipoprotein [Bacillus
           subtilis BSn5]
 gi|320018543|gb|ADV93529.1| glutamine ABC transporter (glutamine-binding lipoprotein) [Bacillus
           subtilis BSn5]
          Length = 273

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 101/260 (38%), Gaps = 23/260 (8%)

Query: 1   MYKDFFVSILCLIIL-FFTSFSTNAS-----------ILGDIKKRGFLKCGINTGLVGFA 48
           M K F ++++ L  +    +  +  S            L  IK    +  G+ T    F 
Sbjct: 1   MKKIFSLALISLFAVILLAACGSKGSNGEASKESKKDTLAAIKDNDKIVFGVKTDTRLFG 60

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G+ +GFD+D  + ++  I  D  K ++  + +K R   LQ+  ID +      T
Sbjct: 61  LKNPSSGEIEGFDIDIAKQIAKDILGDEKKAEFKEVTSKTRIPMLQNGDIDAIVATMTIT 120

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I SV  L  G+ +    G+T+   + +    
Sbjct: 121 DERKK--EVDFSDVYFEAGQSLLVKKGSKIKSVEDLDKGSKVLAVKGSTSSQNIREKAPE 178

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A ++ + DA T D + LY +   N     + +     +  P 
Sbjct: 179 A----SVLEFENYAEAFTALKSGQGDALTTDNAILYGMADENKN---YQLTGKPFTDEPY 231

Query: 227 APAIIQGDTEWYNIVSWTHY 246
             A+ +G +     ++ +  
Sbjct: 232 GIAVKKGQSALAKEINASLK 251


>gi|315644844|ref|ZP_07897973.1| extracellular solute-binding protein family 3 [Paenibacillus vortex
           V453]
 gi|315279786|gb|EFU43087.1| extracellular solute-binding protein family 3 [Paenibacillus vortex
           V453]
          Length = 269

 Score =  165 bits (418), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 58/266 (21%), Positives = 109/266 (40%), Gaps = 20/266 (7%)

Query: 1   MYKDF---------FVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVK 51
           M   F          +S++ ++I      S N   L  IKKRG L  G+      F    
Sbjct: 1   MKNRFTRKFRWSAAILSLIMMLIASGCGGSGNTDTLDAIKKRGKLVAGVKYDTKLFGLQD 60

Query: 52  A-NGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLR 110
              G+ +GFD+D  +AL+  I  D +K++   + +K R   L++  IDI+      T  R
Sbjct: 61  PATGNVEGFDIDIAKALAKKILGDETKVELKEVTSKTRIDMLKNGDIDIIIATMTITEER 120

Query: 111 EISLGLAFRPITYFDGQGFIMHKKKGISSVSQLSGAS-ICVQAGTTTELTLADYFKAHNM 169
           +    + F  + +  GQ  ++ K   I+ +  L+  + +    G+T+   + +       
Sbjct: 121 KE--QVDFSDVYFEAGQSLLVKKGSPITGLESLNKDTKVLTVKGSTSAQNIREKAP---- 174

Query: 170 KYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPA 229
               + FE  ++   A +A + DA T D S L  ++  +       ++    +  P   A
Sbjct: 175 DAVILEFENYQDAFTALKAGQGDALTTDNSILLGMQQQDP---SFELVGGNFTDEPYGMA 231

Query: 230 IIQGDTEWYNIVSWTHYAMVTAEELG 255
           I +G+ E+   V+     M  + +  
Sbjct: 232 IKKGNPEFVKTVNELLKEMKDSGDYD 257


>gi|229188845|ref|ZP_04315879.1| hypothetical protein bcere0002_5360 [Bacillus cereus ATCC 10876]
 gi|228594658|gb|EEK52443.1| hypothetical protein bcere0002_5360 [Bacillus cereus ATCC 10876]
          Length = 276

 Score =  165 bits (417), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEKIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I SV  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSVDDIKQGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M  + E  
Sbjct: 235 GIAVQKGADDLTKEINTLIKDMKASGEYD 263


>gi|152985853|ref|YP_001351140.1| putative ABC transporter binding protein subunit [Pseudomonas
           aeruginosa PA7]
 gi|150961011|gb|ABR83036.1| probable binding protein component of ABC transporter [Pseudomonas
           aeruginosa PA7]
          Length = 299

 Score =  165 bits (417), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 102/260 (39%), Gaps = 9/260 (3%)

Query: 1   MYKDFFVSILCLIILFFTSFSTN--ASILGDIKKRGFLKCGINTGLVGFAEV-KANGDWK 57
           M      ++   + L   +      +  L  +   G +  G     V F+ +   +G   
Sbjct: 1   MKTLVSSTLAFSLSLAIGAAQAEELSGTLKKVADNGTITLGYRDASVPFSYLGDNSGRPM 60

Query: 58  GFDVDFC----RALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+ VD        L + +     +++Y  + ++ R   +Q+  +D+   +T  T  R+  
Sbjct: 61  GYSVDLAGKVVERLKATLGKPELRVKYNLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQ 120

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           +   F     +     +  K  GI+    L G ++   AGTT E  L +Y   H +  + 
Sbjct: 121 VA--FSYGFIYVKGQLLTRKDSGIAHFDDLKGRNVVTTAGTTNERYLKNYNAEHKLGMNV 178

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +  +   E     ++ R  A+  D + LY  +    +P + V++ +  S+   +  + + 
Sbjct: 179 VSAKDHGEAFQMLQSGRAVAFYMDDALLYGERAKARQPHDWVVVGEPQSREIYSCMVRKD 238

Query: 234 DTEWYNIVSWTHYAMVTAEE 253
           D ++  +V+ T   +  + E
Sbjct: 239 DPQFLALVNETLAGLYRSGE 258


>gi|218895694|ref|YP_002444105.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus G9842]
 gi|228899325|ref|ZP_04063588.1| hypothetical protein bthur0014_5490 [Bacillus thuringiensis IBL
           4222]
 gi|228963737|ref|ZP_04124879.1| hypothetical protein bthur0004_6060 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|218544001|gb|ACK96395.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus G9842]
 gi|228795973|gb|EEM43439.1| hypothetical protein bthur0004_6060 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228860356|gb|EEN04753.1| hypothetical protein bthur0014_5490 [Bacillus thuringiensis IBL
           4222]
          Length = 276

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I S+  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSIDDIKQGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M  + E  
Sbjct: 235 GIAVQKGADDLTKEINNLLKDMKASGEYD 263


>gi|163868657|ref|YP_001609866.1| amino-acid ABC transporter binding protein [Bartonella tribocorum
           CIP 105476]
 gi|161018313|emb|CAK01871.1| amino-acid ABC transporter binding protein [Bartonella tribocorum
           CIP 105476]
          Length = 301

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 56/258 (21%), Positives = 98/258 (37%), Gaps = 6/258 (2%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFD 60
           M K   + I    I   +        L  IK+ G +  G+     G A    N  + GF 
Sbjct: 1   MKKSLLMFIAAAAIGLTSGAHAENDTLEKIKQTGEITLGVRESS-GLAYALGNNKYVGFH 59

Query: 61  VDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
            +    +   I        KI YLP+ ++ R   L++K  D    +T   + R       
Sbjct: 60  TEMAEHIIDDISKKIGKSIKIHYLPITSQNRIPLLKNKTYDFECGSTTNDIARSKEAA-- 117

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F   TY +     + K   I S+  L+G  +    GTT+   +    +A N+ +  +  +
Sbjct: 118 FAYTTYVEEVRIAVKKNSNIKSLDDLNGKIVATTTGTTSVQLIRKNKRAKNIHFKVVKGK 177

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
              +      + R DA+  D S L      +  PS++VIL  ++S  P+A  +   D  +
Sbjct: 178 DHGDSFLLLESGRADAFVMDASILAGHIAKSKNPSDYVILDTVLSVEPIACMLRLHDKNF 237

Query: 238 YNIVSWTHYAMVTAEELG 255
              ++ +    +  E L 
Sbjct: 238 EQAINDSILHQIKDESLE 255


>gi|116750584|ref|YP_847271.1| extracellular solute-binding protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116699648|gb|ABK18836.1| extracellular solute-binding protein, family 3 [Syntrophobacter
           fumaroxidans MPOB]
          Length = 295

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 12/255 (4%)

Query: 1   MYKDFFVSILCLIILFFTSFST----NASILGDIKKRGFLKCGINTGLVGFAEVKANGDW 56
           M +  F +    ++L +T+ +       S++  I++ G +  G   G V F  +   G W
Sbjct: 1   MMRKLFGASAAALLLMWTANTACPAHAESVMDKIERTGKVNMGHREGAVPFGYMDEKGQW 60

Query: 57  KGFDVDFCRALSSAI---FDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
            GFD+D    L+ A+   F    +    P+N K R   + +  +D+   +T  TL RE  
Sbjct: 61  VGFDMDLGAELAKALETKFGKKIEYIKTPMNPKNRIPLVANGTVDVGIGSTTITLEREE- 119

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTT-ELTLADYFKAH--NMK 170
             + F    +  G   ++ K   I    QL+G  + V +G+T     L     A   +  
Sbjct: 120 -AVDFSLPYFLTGTKLLVPKGSPIRDYRQLAGKKVGVGSGSTANIKGLQKAIDAKTIDPP 178

Query: 171 YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAI 230
              ++FE   +     +  + DAY  D + L  ++    +P +  ++   ++  P    +
Sbjct: 179 CEMVLFEDHAKGFLGLQQGKIDAYFTDEAMLAGMRAKAQKPDDWEVVAPFLTYEPYGFIL 238

Query: 231 IQGDTEWYNIVSWTH 245
            + D++W + V+ T 
Sbjct: 239 PRDDSKWRDFVNATL 253


>gi|57506052|ref|ZP_00371975.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           (glnH) [Campylobacter upsaliensis RM3195]
 gi|57015660|gb|EAL52451.1| glutamine ABC transporter, periplasmic glutamine-binding protein
           (glnH) [Campylobacter upsaliensis RM3195]
          Length = 277

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/277 (22%), Positives = 117/277 (42%), Gaps = 14/277 (5%)

Query: 1   MYKDFFVSILCLIILFFTSFSTNAS---ILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M K         + +F T+  ++ S    +  IK  G +K G+      F  V   G  +
Sbjct: 1   MKKILLSIFTAFVAVFLTACGSSESGVNSIERIKNAGVVKIGVFGDKPPFGYVDEKGTNQ 60

Query: 58  GFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLA 117
           G+D+ F + ++  +  D +K++++ + A  R   L+S ++DI+  N   T  R     + 
Sbjct: 61  GYDIIFAKRIAKELLGDENKVEFVLVEAANRVEFLKSNKVDIILANFTQTPERAE--QVD 118

Query: 118 FRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFE 177
           F         G  + K   I SV  L   ++ +  GTT +      F  ++     + F+
Sbjct: 119 FALPYMKVALGVAVPKDSEIKSVEDLKDKTLILNKGTTADAY----FTKNHADIKTLKFD 174

Query: 178 RVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEW 237
           +  E  AA    R DA   D + L+A     +RP   V++ ++ ++  +APA+ +GD E 
Sbjct: 175 QNTETFAALMDKRGDALAHDNTLLFAW--VKERPDYKVVIKELGNQDVIAPAVKKGDKEL 232

Query: 238 YNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQ 274
              +       + AE+     K  ++  K     D++
Sbjct: 233 KEFIDNLII-SLAAEQF--FHKAYDESLKAHFGADIK 266


>gi|145589173|ref|YP_001155770.1| extracellular solute-binding protein [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|145047579|gb|ABP34206.1| amino acid ABC transporter substrate-binding protein, PAAT family
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 304

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 102/253 (40%), Gaps = 9/253 (3%)

Query: 1   MY-KDFFVSILCLIILFFTS--FSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWK 57
           M  K+   + +        +   +  +  L  IK  G +  G+    +  +    +  + 
Sbjct: 1   MKYKNLISASVFAASFLVGAIDANAASQTLDKIKSSGAVTMGVRESSIPMSYTTGDSRFD 60

Query: 58  GFDVDFCRALS----SAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113
           G+ V+ CR +       +     +I Y P+ ++ R   +Q+  +DI    T   + R   
Sbjct: 61  GYHVEICRMILGDIKDKLGMSTLRINYQPVTSQNRVPLVQNGTVDIECGTTTNNVNRAKD 120

Query: 114 LGLAFRPITYFDGQGFIMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP 173
           +G  F    Y +     +    GI+S+SQL+G  +    GTT+   L  + KA+ + +  
Sbjct: 121 VG--FAYTLYVEEVRIAVKANSGITSISQLAGKKVATTTGTTSVQLLRKHEKANGVNFEE 178

Query: 174 IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQG 233
           +  +   +      + R DA+  D S L      +  P ++ I+ +++S  P+A  + + 
Sbjct: 179 VYGKDHADSFLLLESGRADAFVMDGSILAGNIANSKNPKDYKIVGEVLSTEPIAIMVRKD 238

Query: 234 DTEWYNIVSWTHY 246
           D E+   V     
Sbjct: 239 DPEFKAAVDAAIT 251


>gi|228957061|ref|ZP_04118835.1| hypothetical protein bthur0005_5930 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228802621|gb|EEM49464.1| hypothetical protein bthur0005_5930 [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 276

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I SV  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSVDDIKQGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M  + E  
Sbjct: 235 GIAVQKGADDLTKEINTLIKDMKASGEYD 263


>gi|229068325|ref|ZP_04201628.1| hypothetical protein bcere0025_5400 [Bacillus cereus F65185]
 gi|228714786|gb|EEL66658.1| hypothetical protein bcere0025_5400 [Bacillus cereus F65185]
          Length = 273

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 1   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 60

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 61  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 120

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I SV  +  G  +    G+T+   +      
Sbjct: 121 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSVDDIKQGVKVLAVKGSTSTNNIRQKSPE 178

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 179 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 231

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M  + E  
Sbjct: 232 GIAVQKGADDLTKEINTLIKDMKASGEYD 260


>gi|229177165|ref|ZP_04304554.1| hypothetical protein bcere0005_5410 [Bacillus cereus 172560W]
 gi|228606346|gb|EEK63778.1| hypothetical protein bcere0005_5410 [Bacillus cereus 172560W]
          Length = 276

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEVKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I SV  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSVDDIKQGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M  + E  
Sbjct: 235 GIAVQKGADDLTKEINTLIKDMKASGEYD 263


>gi|206967952|ref|ZP_03228908.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus AH1134]
 gi|228906387|ref|ZP_04070271.1| hypothetical protein bthur0013_5700 [Bacillus thuringiensis IBL
           200]
 gi|228951131|ref|ZP_04113247.1| hypothetical protein bthur0006_5580 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|229077953|ref|ZP_04210562.1| hypothetical protein bcere0023_6430 [Bacillus cereus Rock4-2]
 gi|229108249|ref|ZP_04237871.1| hypothetical protein bcere0018_5390 [Bacillus cereus Rock1-15]
 gi|229143367|ref|ZP_04271798.1| hypothetical protein bcere0012_5390 [Bacillus cereus BDRD-ST24]
 gi|206736872|gb|EDZ54019.1| amino acid ABC transporter, amino acid-binding protein [Bacillus
           cereus AH1134]
 gi|228640174|gb|EEK96573.1| hypothetical protein bcere0012_5390 [Bacillus cereus BDRD-ST24]
 gi|228675265|gb|EEL30487.1| hypothetical protein bcere0018_5390 [Bacillus cereus Rock1-15]
 gi|228705291|gb|EEL57668.1| hypothetical protein bcere0023_6430 [Bacillus cereus Rock4-2]
 gi|228808541|gb|EEM55044.1| hypothetical protein bthur0006_5580 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228853299|gb|EEM98072.1| hypothetical protein bthur0013_5700 [Bacillus thuringiensis IBL
           200]
          Length = 276

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 23/269 (8%)

Query: 1   MYKDF-FVSILCLIILFFTSFST-----------NASILGDIKKRGFLKCGINTGLVGFA 48
           M K F  +   CL +L      +               +  IKKRG L  G+      F 
Sbjct: 4   MKKLFTLIVFSCLFVLVVAGCGSKKDEAKETNTKQGGAVEQIKKRGKLVVGVKNDTNLFG 63

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G  +GFDVD  +AL+  I  D  K++   + +K R   L++  ID +      T
Sbjct: 64  LKNPSTGQVEGFDVDVAKALAKKILGDEKKLELKEVTSKTRIPMLKNGDIDAIIATMTIT 123

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I SV  +  G  +    G+T+   +      
Sbjct: 124 EERKK--EVDFSDVYFKAGQSLLVKKGSNIKSVDDIKQGVKVLAVKGSTSTNNIRQKSPE 181

Query: 167 HNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPL 226
                  + FE   E   A +A + D  T D + LY +   +     + ++  I +  P 
Sbjct: 182 A----TVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSN---YEVVGKIFTDEPY 234

Query: 227 APAIIQGDTEWYNIVSWTHYAMVTAEELG 255
             A+ +G  +    ++     M  + E  
Sbjct: 235 GIAVQKGADDLTKEINTLIKDMKASGEYD 263


>gi|291485150|dbj|BAI86225.1| glutamine ABC transporter, glutamine-binding protein [Bacillus
           subtilis subsp. natto BEST195]
          Length = 273

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 53/260 (20%), Positives = 102/260 (39%), Gaps = 23/260 (8%)

Query: 1   MYKDFFVSILCLIIL-FFTSFSTNAS-----------ILGDIKKRGFLKCGINTGLVGFA 48
           M K F ++++ L  +    + S+  S            L  IK    +  G+ T    F 
Sbjct: 1   MKKIFSLALISLFAVILLAACSSKGSNGEASKESKKDTLAAIKDNDKIVFGVKTDTRLFG 60

Query: 49  EVKAN-GDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWT 107
               + G+ +GFD+D  + ++  I  D  K ++  + +K R   LQ+  ID +      T
Sbjct: 61  LKNPSSGEIEGFDIDIAKQIAKDILVDEKKAEFKEVTSKTRIPMLQNGDIDAIVATMTIT 120

Query: 108 LLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGTTTELTLADYFKA 166
             R+    + F  + +  GQ  ++ K   I SV  L  G+ +    G+T+   + +    
Sbjct: 121 DERKK--EVDFSDVYFEAGQSLLVKKGSKIKSVEDLDKGSKVLAVKGS