RPSBLAST alignment of GI: 254780170 and protein with PDBid: 2q88

>2q88_A EHUB, putative ABC transporter amino acid-binding protein; substrate-binding protein, compatible solues, osmoprotection; HET: 4CS; 1.90A {Sinorhizobium meliloti} PDB: 2q89_A* Length = 257

 Score = 53.6 bits (127), Expect = 6e-08
 Identities = 31/227 (13%), Positives = 67/227 (29%), Gaps = 4/227 (1%)

Query: 23  NASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP 82
           + + L ++K++GF +  I      F  V A+G   G   D  R +   +    + +    
Sbjct: 2   DENKLEELKEQGFARIAIANE-PPFTAVGADGKVSGAAPDVAREIFKRL--GVADVVASI 58

Query: 83  LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISSVSQ 142
                    LQ+ + D ++        R  ++  +   +   +          G+ S   
Sbjct: 59  SEYGAMIPGLQAGRHDAITAGLFMKPERCAAVAYSQPILCDAEAFALKKGNPLGLKSYKD 118

Query: 143 LSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGD-ISAL 201
           ++                    +A   +   IV    +      +  R D Y+   +S  
Sbjct: 119 IADNPDAKIGAPGGGTEEKLALEAGVPRDRVIVVPDGQSGLKMLQDGRIDVYSLPVLSIN 178

Query: 202 YALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248
             +   ND   E +   +         A  +GD    +        +
Sbjct: 179 DLVSKANDPNVEVLAPVEGAPVYCDGAAFRKGDEALRDAFDVELAKL 225