RPSBLAST alignment of GI: 254780170 and protein with PDBid: 2vha

>2vha_A Periplasmic binding transport protein; periplasmic binding protein, ligand binding, ultrahigh resolution; HET: GLU; 1.0A {Shigella flexneri} PDB: 2ia4_A* Length = 287

 Score = 95.1 bits (235), Expect = 2e-20
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 6/235 (2%)

Query: 24  ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPS----KIQ 79
            S L  I K G +  G     V F+         G+  D+  A+  A+    +    +++
Sbjct: 7   GSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVK 66

Query: 80  YLPLNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKGISS 139
            +P+ ++ R   LQ+   D    +T   +  E     AF    +  G   +  K   I  
Sbjct: 67  LIPITSQNRIPLLQNGTFDFECGSTTNNV--ERQKQAAFSDTIFVVGTRLLTKKGGDIKD 124

Query: 140 VSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDIS 199
            + L G ++ V +GTT+E+ L    +   M    I  +   +      + R  A+  D +
Sbjct: 125 FADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDA 184

Query: 200 ALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEEL 254
            L   +    +P    I+    S+      + + D ++  ++  T   + T+ E 
Sbjct: 185 LLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEA 239