HHsearch alignment for GI: 254780171 and conserved domain: COG0600
>COG0600 TauC ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].
Probab=99.41 E-value=1.9e-09 Score=76.34 Aligned_cols=234 Identities=15% Similarity=0.231 Sum_probs=139.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999972887781213889984437542235686526999999999999999999999
Q gi|254780171|r 27 ISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIP 106 (398)
Q Consensus 27 ~~~Q~~~~~~~~~~~~~l~~n~~~nl~~~gi~~gf~FL~~~agf~I~~~~i~y~~~~sy~~a~~vGl~NTl~va~~givl 106 (398)
T Consensus 12 ~~~~~~~~~-~~l~~Wq~~~~~~----------~~~~~~LP~P~~V~~~~~~~~~~g----~L~~~~~~Sl~rv~~Gf~l 76 (258)
T COG0600 12 ALLPLLGLL-ALLALWQLAARLG----------LIPPFILPSPSAVLAALVELLASG----ELFQHLLASLLRVLLGFAL 76 (258)
T ss_pred HHHHHHHHH-HHHHHHHHHHHCC----------CCCCCCCCCHHHHHHHHHHHCCCC----HHHHHHHHHHHHHHHHHHH
T ss_conf 999999999-9999999998603----------489877899899999999882375----5999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHCCCHHHHHHCCCCEEEEECCCCCCCCCCC
Q ss_conf 999999999996264246787799999999501469999999--999873012103444103720352010003545355
Q gi|254780171|r 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL--YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184 (398)
Q Consensus 107 atiLG~~iGi~RlS~N~ll~~la~~YVE~~RN~PLLlql~fw--y~~v~~~lP~~~~~~~~~~~~flsnRGL~iP~p~~~ 184 (398)
T Consensus 77 a~~~gi~lgil~-g~~~~~~~~l~P~i~~l~~iP~lA~~Pl~ilwfG~-------------------------------g 124 (258)
T COG0600 77 AAVLGIPLGILM-GLSRLLERLLDPLVQVLRPIPPLALAPLAILWFGI-------------------------------G 124 (258)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC-------------------------------C
T ss_conf 999999999999-85799999996999999317779999999999907-------------------------------9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
Q ss_conf 67004688778899999999999999864311223320455421010355899976544433221001311126821487
Q gi|254780171|r 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264 (398)
Q Consensus 185 ~g~~~~l~~lilaiila~~l~~~a~~~~~~tg~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~p~l~~f~~~gG~~l~p 264 (398)
T Consensus 125 ~~s-----~i~i~------------------------------------------------------------------- 132 (258)
T COG0600 125 ETS-----KIVIA------------------------------------------------------------------- 132 (258)
T ss_pred CCH-----HHHHH-------------------------------------------------------------------
T ss_conf 611-----99999-------------------------------------------------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999977879999999998346367899989689989988898768999997410478999999754999999
Q gi|254780171|r 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 (398)
Q Consensus 265 ~f~a~~iaL~l~taAyiaEivR~gI~sVpkGQ~EAA~aLGls~~q~~r~VIlPQAlR~~iP~l~nq~i~l~K~SSLa~~I 344 (398)
T Consensus 133 -~~~~ffpi~in--------t~~Gvr~v~~~~~~~ar~lgas~~~~l~~v~lP~AlP~i~tgLRia-----~g~aw~~~V 198 (258)
T COG0600 133 -VLGAFFPILIN--------TLDGVRSVDPDLLELARTLGASRWQILRKVILPAALPYIFTGLRIA-----IGLAWIGLV 198 (258)
T ss_pred -HHHHHHHHHHH--------HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHH-----HHHHHHHHH
T ss_conf -99999999999--------9999871899999999980989777877620530078999999999-----999999999
Q ss_pred HHHHHHHH----HH-HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999----99-9983137758999999999999999999999999678743
Q gi|254780171|r 345 GFADLVSV----GG-TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 (398)
Q Consensus 345 g~~dl~~~----~~-~~~~~t~~~~e~~~i~~~~Yl~isl~iS~~~n~~~rr~~l 394 (398)
T Consensus 199 -vaE~l~a~~GLG~~i~~a~~~~~~~~v~a~i~~i~~lgll~d~~v~~~er~~~~ 252 (258)
T COG0600 199 -VAELLGASSGLGYLILDARNNLQTDLVFAAILVIALLGLLLDRLVRLLERRLLR 252 (258)
T ss_pred -HHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf -999970566687999999985167899999999999999999999999999852