HHsearch alignment for GI: 254780171 and conserved domain: COG0600

>COG0600 TauC ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].
Probab=99.41  E-value=1.9e-09  Score=76.34  Aligned_cols=234  Identities=15%  Similarity=0.231  Sum_probs=139.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999999972887781213889984437542235686526999999999999999999999
Q gi|254780171|r   27 ISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIP  106 (398)
Q Consensus        27 ~~~Q~~~~~~~~~~~~~l~~n~~~nl~~~gi~~gf~FL~~~agf~I~~~~i~y~~~~sy~~a~~vGl~NTl~va~~givl  106 (398)
T Consensus        12 ~~~~~~~~~-~~l~~Wq~~~~~~----------~~~~~~LP~P~~V~~~~~~~~~~g----~L~~~~~~Sl~rv~~Gf~l   76 (258)
T COG0600          12 ALLPLLGLL-ALLALWQLAARLG----------LIPPFILPSPSAVLAALVELLASG----ELFQHLLASLLRVLLGFAL   76 (258)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHCC----------CCCCCCCCCHHHHHHHHHHHCCCC----HHHHHHHHHHHHHHHHHHH
T ss_conf             999999999-9999999998603----------489877899899999999882375----5999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHCCCHHHHHHCCCCEEEEECCCCCCCCCCC
Q ss_conf             999999999996264246787799999999501469999999--999873012103444103720352010003545355
Q gi|254780171|r  107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL--YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD  184 (398)
Q Consensus       107 atiLG~~iGi~RlS~N~ll~~la~~YVE~~RN~PLLlql~fw--y~~v~~~lP~~~~~~~~~~~~flsnRGL~iP~p~~~  184 (398)
T Consensus        77 a~~~gi~lgil~-g~~~~~~~~l~P~i~~l~~iP~lA~~Pl~ilwfG~-------------------------------g  124 (258)
T COG0600          77 AAVLGIPLGILM-GLSRLLERLLDPLVQVLRPIPPLALAPLAILWFGI-------------------------------G  124 (258)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC-------------------------------C
T ss_conf             999999999999-85799999996999999317779999999999907-------------------------------9


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
Q ss_conf             67004688778899999999999999864311223320455421010355899976544433221001311126821487
Q gi|254780171|r  185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP  264 (398)
Q Consensus       185 ~g~~~~l~~lilaiila~~l~~~a~~~~~~tg~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~p~l~~f~~~gG~~l~p  264 (398)
T Consensus       125 ~~s-----~i~i~-------------------------------------------------------------------  132 (258)
T COG0600         125 ETS-----KIVIA-------------------------------------------------------------------  132 (258)
T ss_pred             CCH-----HHHHH-------------------------------------------------------------------
T ss_conf             611-----99999-------------------------------------------------------------------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             89999999999977879999999998346367899989689989988898768999997410478999999754999999
Q gi|254780171|r  265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV  344 (398)
Q Consensus       265 ~f~a~~iaL~l~taAyiaEivR~gI~sVpkGQ~EAA~aLGls~~q~~r~VIlPQAlR~~iP~l~nq~i~l~K~SSLa~~I  344 (398)
T Consensus       133 -~~~~ffpi~in--------t~~Gvr~v~~~~~~~ar~lgas~~~~l~~v~lP~AlP~i~tgLRia-----~g~aw~~~V  198 (258)
T COG0600         133 -VLGAFFPILIN--------TLDGVRSVDPDLLELARTLGASRWQILRKVILPAALPYIFTGLRIA-----IGLAWIGLV  198 (258)
T ss_pred             -HHHHHHHHHHH--------HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHH-----HHHHHHHHH
T ss_conf             -99999999999--------9999871899999999980989777877620530078999999999-----999999999


Q ss_pred             HHHHHHHH----HH-HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999----99-9983137758999999999999999999999999678743
Q gi|254780171|r  345 GFADLVSV----GG-TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL  394 (398)
Q Consensus       345 g~~dl~~~----~~-~~~~~t~~~~e~~~i~~~~Yl~isl~iS~~~n~~~rr~~l  394 (398)
T Consensus       199 -vaE~l~a~~GLG~~i~~a~~~~~~~~v~a~i~~i~~lgll~d~~v~~~er~~~~  252 (258)
T COG0600         199 -VAELLGASSGLGYLILDARNNLQTDLVFAAILVIALLGLLLDRLVRLLERRLLR  252 (258)
T ss_pred             -HHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             -999970566687999999985167899999999999999999999999999852