HHsearch alignment for GI: 254780171 and conserved domain: COG4209

Probab=97.77  E-value=0.0015  Score=40.31  Aligned_cols=120  Identities=17%  Similarity=0.130  Sum_probs=74.5

Q ss_pred             HHHHHHH-HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHH
Q ss_conf             9999999-7787999999999834636789998968998998889876899999741047899----------9999754
Q gi|254780171|r  270 YIALSCY-TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY----------LNLLKNS  338 (398)
Q Consensus       270 ~iaL~l~-taAyiaEivR~gI~sVpkGQ~EAA~aLGls~~q~~r~VIlPQAlR~~iP~l~nq~----------i~l~K~S  338 (398)
T Consensus       173 ~i~~~vWK~~G~~SIiylAai~~Idpt~YEAA~vDGA~rwqqiwhITlP~i~P~ivIllIL~iG~i~~~gFe~~yll~~~  252 (309)
T COG4209         173 IIFSSVWKGAGWNSIIYLAAIAGIDPTLYEAAMVDGASRWQQIWHITLPAIRPLIVILLILNIGNIFNAGFELFYLLPNP  252 (309)
T ss_pred             HHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCC
T ss_conf             87898884236788999999972799999999805488778888211032314999999998523765372560660576


Q ss_pred             HHHHHHHHHHHHHH-HHHHHHCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999-9999831377589999999999-99999999999999678743
Q gi|254780171|r  339 SLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIY-LSLSIMIALFMNRLNAKIAL  394 (398)
Q Consensus       339 SLa~~Ig~~dl~~~-~~~~~~~t~~~~e~~~i~~~~Y-l~isl~iS~~~n~~~rr~~l  394 (398)
T Consensus       253 ~~---~~v~~vldtYVy~~gl~~Gd~--s~sTAaGlf~svVg~iLl~~aN~iakr~~~  305 (309)
T COG4209         253 SG---YDVTEVLDTYVYRGGLVTGDY--SYSTAAGLFQSVVGFILLFLANRIAKRFDN  305 (309)
T ss_pred             CC---CCHHHHHHHHHHHHCCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             68---748989999999810135751--189999999999999999999999997062