HHsearch alignment for GI: 254780171 and conserved domain: PRK09494
>PRK09494 glnP glutamine ABC transporter permease protein; Reviewed.
Probab=100.00 E-value=0 Score=430.57 Aligned_cols=211 Identities=28% Similarity=0.520 Sum_probs=199.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
Q ss_conf 52699999999999999999999999999999999626424678779999999950146999999999987301210344
Q gi|254780171|r 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162 (398)
Q Consensus 83 ~sy~~a~~vGl~NTl~va~~givlatiLG~~iGi~RlS~N~ll~~la~~YVE~~RN~PLLlql~fwy~~v~~~lP~~~~~ 162 (398)
T Consensus 9 ~~~~p~ll~Gl~~Tl~l~~~s~~~g~~lG~~~a~~r~~~~~~l~~~~~~yv~~~RgtPlLv~lf~~yfglp~l~~----- 83 (219)
T PRK09494 9 WPAIPLLLEGAKMTLWISVLGLAGGLVIGLLAGFARAYGGWIANHIALVFIELIRGTPIVVQVMFIYFALPMAFN----- 83 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC-----
T ss_conf 998999999999999999999999999999999999889689999999999999764899999999998998546-----
Q ss_pred HHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHH
Q ss_conf 41037203520100035453556700468877889999999999999986431122332045542101035589997654
Q gi|254780171|r 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 (398)
Q Consensus 163 ~~~~~~~flsnRGL~iP~p~~~~g~~~~l~~lilaiila~~l~~~a~~~~~~tg~~~~~~~~~~~~~~~~p~l~~~~~~~ 242 (398)
T Consensus 84 -------------------------------------------------------------------------------- 83 (219)
T PRK09494 84 -------------------------------------------------------------------------------- 83 (219)
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 44332210013111268214878999999999997787999999999834636789998968998998889876899999
Q gi|254780171|r 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 (398)
Q Consensus 243 ~~~~~~p~l~~f~~~gG~~l~p~f~a~~iaL~l~taAyiaEivR~gI~sVpkGQ~EAA~aLGls~~q~~r~VIlPQAlR~ 322 (398)
T Consensus 84 ----------------~i~~-~~~~~~vi~l~l~~~Ay~aEi~R~gi~sVp~GQ~EAA~alG~s~~q~~r~IilPQa~r~ 146 (219)
T PRK09494 84 ----------------DLRI-DPFSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRETLRYVIGPLALRR 146 (219)
T ss_pred ----------------CCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf ----------------7774-89999999999999999999999999983187999998859898889896469987999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7410478999999754999999999999999999831377589999999999999999999999996787430
Q gi|254780171|r 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 (398)
Q Consensus 323 ~iP~l~nq~i~l~K~SSLa~~Ig~~dl~~~~~~~~~~t~~~~e~~~i~~~~Yl~isl~iS~~~n~~~rr~~l~ 395 (398)
T Consensus 147 ~lP~l~n~~i~liK~Tsl~s~Igv~El~~~a~~i~~~t~~~~e~~~~~a~iY~~l~~~l~~~~~~lErrl~i~ 219 (219)
T PRK09494 147 MLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFILRRLERRMKIL 219 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 8878899999999987999999899999999999971071899999999999999999999999999877149