HHsearch alignment for GI: 254780171 and conserved domain: PRK09497
>PRK09497 potB spermidine/putrescine ABC transporter membrane protein; Reviewed.
Probab=99.61 E-value=1.8e-12 Score=94.67 Aligned_cols=133 Identities=17% Similarity=0.097 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999778799999999983463678999896899899888987689999974104789999997549999999
Q gi|254780171|r 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 (398)
Q Consensus 266 f~a~~iaL~l~taAyiaEivR~gI~sVpkGQ~EAA~aLGls~~q~~r~VIlPQAlR~~iP~l~nq~i~l~K~SSLa~~Ig 345 (398)
T Consensus 150 ~~~vii~~v~~~lPf~~l~l~a~l~~i~~~l~EAA~~lGAs~~~~F~~I~lPl~~Pgi~~~~il~fi~s~~~F~~~~~lg 229 (285)
T PRK09497 150 ESAVIIGLVYILLPFMVLPLYSSIEKLDKPLLEAARDLGANKLQTFIRIIIPLTMPGIIAGCLLVLLPAMGMFYVSDLLG 229 (285)
T ss_pred HHHHHHHHHEEECHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHEEHHEEEHHHHHHHHHHHHHHHHHHHHHHHEEEECC
T ss_conf 98887875313120677437878840896899999875999789132022081089999999999999988762100104
Q ss_pred HHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 9999999999983137--7589999999999999999999999996787430479
Q gi|254780171|r 346 FADLVSVGGTIINQTG--QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 (398)
Q Consensus 346 ~~dl~~~~~~~~~~t~--~~~e~~~i~~~~Yl~isl~iS~~~n~~~rr~~l~er~ 398 (398)
T Consensus 230 G~~~~~l~~~i~~~~~~~~~~~~aaA~svil~~i~~~~~~i~~r~~k~~~kk~~~ 284 (285)
T PRK09497 230 GAKNLLIGNVIKSQFLNIRDWPFGAATSITLTIVMGLMLLVYYRASKLLNKKVEL 284 (285)
T ss_pred CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC
T ss_conf 8975529999999998706906999999999999999999999999995301416