HHsearch alignment for GI: 254780171 and conserved domain: PRK09500
>PRK09500 potC spermidine/putrescine ABC transporter membrane protein; Reviewed.
Probab=99.56 E-value=1.7e-11 Score=88.70 Aligned_cols=126 Identities=21% Similarity=0.219 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999778799999999983463678999896899899888987689999974104789999997549999999
Q gi|254780171|r 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 (398)
Q Consensus 266 f~a~~iaL~l~taAyiaEivR~gI~sVpkGQ~EAA~aLGls~~q~~r~VIlPQAlR~~iP~l~nq~i~l~K~SSLa~~Ig 345 (398)
T Consensus 128 ~~~lil~~~~~~lP~~~~~i~~~l~~i~~~l~EAA~~lGAs~~~~f~~VilPl~~P~i~~~~il~F~~s~~ef~~~~~l~ 207 (257)
T PRK09500 128 FWSLLFAHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEVTILRKIILPLAMPAVAAGWLLSFTLSMDDVVVSSFVT 207 (257)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999888885150279999999971796999999872999879636312984799999999999999999999999752
Q ss_pred HHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999983--1377589999999999999999999999996787
Q gi|254780171|r 346 FADLVSVGGTIIN--QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 (398)
Q Consensus 346 ~~dl~~~~~~~~~--~t~~~~e~~~i~~~~Yl~isl~iS~~~n~~~rr~ 392 (398)
T Consensus 208 g~~~~tlp~~i~~~~~~~~~-~~~~Ala~il~~i~~~~~~l~~~l~r~~ 255 (257)
T PRK09500 208 GPSYEILPLKIYSMVKVGVS-PEVNALATILLVLSLVLVILSQLLARDK 255 (257)
T ss_pred CCCCEEHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 89960289999999873787-5999999999999999999999986654