HHsearch alignment for GI: 254780171 and conserved domain: PRK10561
>PRK10561 glycerol-3-phosphate transporter permease; Provisional.
Probab=99.17 E-value=1.2e-07 Score=65.19 Aligned_cols=128 Identities=13% Similarity=0.079 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q ss_conf 8999999999997787999999999834636789998968998998889876899999741047899999-975499999
Q gi|254780171|r 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL-LKNSSLAVA 343 (398)
Q Consensus 265 ~f~a~~iaL~l~taAyiaEivR~gI~sVpkGQ~EAA~aLGls~~q~~r~VIlPQAlR~~iP~l~nq~i~l-~K~SSLa~~ 343 (398)
T Consensus 142 a~~~vi~~~vW~~~g~~~li~lagL~~Ip~~l~EAA~iDGA~~~q~f~~ItlPll~p~~~~~~i~~~i~~~~~~f~~i~~ 221 (280)
T PRK10561 142 AMFLVVFASVWKQISYNFLFFYAALQSIPRSLVEAAAIDGAGPIRRFFKLALPLIAPVSFFLLVVNLVYAFFDTFPVIDA 221 (280)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999998999999999985799779999997699775233123046105999999999999999965688864
Q ss_pred H--HHH-HHH-HHHHHHHHCCCCHH--HHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q ss_conf 9--999-999-99999983137758--9999999999999999999999-996787
Q gi|254780171|r 344 V--GFA-DLV-SVGGTIINQTGQAI--EIILIWMFIYLSLSIMIALFMN-RLNAKI 392 (398)
Q Consensus 344 I--g~~-dl~-~~~~~~~~~t~~~~--e~~~i~~~~Yl~isl~iS~~~n-~~~rr~ 392 (398)
T Consensus 222 ~t~GGP~~~t~~l~~~iy~~~f~~~~~g~asA~svil~~i~~~~~~i~~r~~~rkv 277 (280)
T PRK10561 222 ATSGGPVQATTTLIYKIYREGFTGLDLSSSAAQSVVLMFLVIVLTVVQFRYVESKV 277 (280)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
T ss_conf 36888852889999999999987599619999999999999999999999983211