HHsearch alignment for GI: 254780171 and conserved domain: PRK10683
>PRK10683 putrescine transporter subunit: membrane component of ABC superfamily; Provisional.
Probab=99.45 E-value=9.7e-10 Score=78.06 Aligned_cols=233 Identities=16% Similarity=0.206 Sum_probs=140.4
Q ss_pred CCCCCCCCCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 8998443754223568--6526999999999999999999999999999999--99626424678779999999950146
Q gi|254780171|r 66 ERAGFEIDQGIVPYTS--DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG--AGRLSANKLVAWICRVYVEVFRNIPP 141 (398)
Q Consensus 66 ~~agf~I~~~~i~y~~--~~sy~~a~~vGl~NTl~va~~givlatiLG~~iG--i~RlS~N~ll~~la~~YVE~~RN~PL 141 (398)
T Consensus 73 ~~~~~~~~~~l~NY~~lf~d~---~y~~a~~nSL~iA~~sT~i~lliG~P~Ay~iar~~--~~~r~~l~~lvilP~~~s~ 147 (317)
T PRK10683 73 ADGQLSITLNLGNFLQLTDDP---LYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHSK--PSTRNILLLLVILPSWTSF 147 (317)
T ss_pred CCCCEEEEECHHHHHHHHCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHH
T ss_conf 566315644489899997697---89999999999999999999999999999999388--6178999999999970679
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99999999998730121034441037203520100035453556700468877889999999999999986431122332
Q gi|254780171|r 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221 (398)
Q Consensus 142 Llql~fwy~~v~~~lP~~~~~~~~~~~~flsnRGL~iP~p~~~~g~~~~l~~lilaiila~~l~~~a~~~~~~tg~~~~~ 221 (398)
T Consensus 148 lVr~~aw~~iL-~------------------~~G~l----------n------------~-------------------- 166 (317)
T PRK10683 148 LIRVYAWMGIL-K------------------NNGVL----------N------------N-------------------- 166 (317)
T ss_pred HHHHHHHHHHH-C------------------CCCHH----------H------------H--------------------
T ss_conf 99999999997-3------------------14348----------7------------8--------------------
Q ss_pred EEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 04554210103558999765444332210013111268214878999999999997787999999999834636789998
Q gi|254780171|r 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 (398)
Q Consensus 222 ~~~~~~~~~~~p~l~~~~~~~~~~~~~p~l~~f~~~gG~~l~p~f~a~~iaL~l~taAyiaEivR~gI~sVpkGQ~EAA~ 301 (398)
T Consensus 167 ------------~L~~--lG--l-i~~p----------l~ll~t~~aViig~v~~~lPfmvL~l~a~L~~id~~L~EAA~ 219 (317)
T PRK10683 167 ------------FLLW--LG--V-IDQP----------LTILHTNLAVYIGIVYAYLPFMVLPIYTALTRIDYSLVEAAL 219 (317)
T ss_pred ------------HHHH--HC--C-CCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf ------------9999--60--4-4676----------322564589999999999999999999999858908999998
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH--HHHHHHHHHHHHHHHH
Q ss_conf 96899899888987689999974104789999997549999999999999999998313775--8999999999999999
Q gi|254780171|r 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA--IEIILIWMFIYLSLSI 379 (398)
Q Consensus 302 aLGls~~q~~r~VIlPQAlR~~iP~l~nq~i~l~K~SSLa~~Ig~~dl~~~~~~~~~~t~~~--~e~~~i~~~~Yl~isl 379 (398)
T Consensus 220 ~LGAs~~~~F~~VtLPL~~PGIiag~lLvFi~a~g~F~iP~lLGG~~~~~i~~~i~~~f~~~~dwp~aaAlavvLl~i~i 299 (317)
T PRK10683 220 DLGARPLKTFFSVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLLLI 299 (317)
T ss_pred HCCCCHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 76998655400232062189999999999999988877686642998562999999999874680589999999999999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999678
Q gi|254780171|r 380 MIALFMNRLNAK 391 (398)
Q Consensus 380 ~iS~~~n~~~rr 391 (398)
T Consensus 300 v~~~~~~r~~~k 311 (317)
T PRK10683 300 VPIMWFHKHQQK 311 (317)
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999887