HHsearch alignment for GI: 254780171 and conserved domain: PRK11123
>PRK11123 arginine transporter permease subunit ArtQ; Provisional.
Probab=100.00 E-value=0 Score=432.88 Aligned_cols=234 Identities=25% Similarity=0.373 Sum_probs=205.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 69999999999999999999999999999999962642467877999999995014699999999998730121034441
Q gi|254780171|r 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164 (398)
Q Consensus 85 y~~a~~vGl~NTl~va~~givlatiLG~~iGi~RlS~N~ll~~la~~YVE~~RN~PLLlql~fwy~~v~~~lP~~~~~~~ 164 (398)
T Consensus 3 ~f~~Ll~G~~~Tl~l~~~a~~~g~~lG~~la~~r~s~~~~l~~~~~~yv~~~RgtP~lv~l~~~yfg~p~l~~~l~~~~~ 82 (238)
T PRK11123 3 EFFPLASAAGMTVGLAVCALIVGLALAMFFAVWESAKWRPVAWPGTALVTLLRGLPEILVVLFIYFGSSQLLLTLSDGFT 82 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 47999999999999999999999999999999998886889999999999991675999999999952898876310000
Q ss_pred CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHH
Q ss_conf 03720352010003545355670046887788999999999999998643112233204554210103558999765444
Q gi|254780171|r 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 (398)
Q Consensus 165 ~~~~~flsnRGL~iP~p~~~~g~~~~l~~lilaiila~~l~~~a~~~~~~tg~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 244 (398)
T Consensus 83 ~~~~~~~------------------------------------------------------------------------~ 90 (238)
T PRK11123 83 LNLGFVQ------------------------------------------------------------------------I 90 (238)
T ss_pred CCCHHHH------------------------------------------------------------------------H
T ss_conf 0100111------------------------------------------------------------------------0
Q ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 33221001311126821487899999999999778799999999983463678999896899899888987689999974
Q gi|254780171|r 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 (398)
Q Consensus 245 ~~~~p~l~~f~~~gG~~l~p~f~a~~iaL~l~taAyiaEivR~gI~sVpkGQ~EAA~aLGls~~q~~r~VIlPQAlR~~i 324 (398)
T Consensus 91 ~~~~~-------~~~~~~~-~f~~avial~l~~~Ay~aEi~R~gi~sVp~GQ~EAa~alGms~~q~~r~IilPQa~r~~l 162 (238)
T PRK11123 91 PVQMD-------IENFEVS-PFLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHAL 162 (238)
T ss_pred HHHCC-------CCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 10012-------1345646-999999999999999999999999983999999999984989999999999899999997
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 10478999999754999999999999999999831377589999999999999999999999996787430479
Q gi|254780171|r 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 (398)
Q Consensus 325 P~l~nq~i~l~K~SSLa~~Ig~~dl~~~~~~~~~~t~~~~e~~~i~~~~Yl~isl~iS~~~n~~~rr~~l~er~ 398 (398)
T Consensus 163 P~l~n~~i~liK~TSL~s~Igv~El~~~a~~i~~~t~~~~e~y~~~a~iYlii~~~l~~~~~~lEkR~~r~~rr 236 (238)
T PRK11123 163 PGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIIAAAIYLVITLISQYILKRIDLRFTRFERR 236 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 38999999999984999999899999999999971345699999999999999999999999999985422578