>TIGR00969 3a0106s02 sulfate ABC transporter, permease protein; InterPro: IPR005667 Bacterial binding protein-dependent transport systems , are multicomponent systems typically composed of a periplasmic substrate-binding protein, one or two reciprocally homologous integral inner-membrane proteins and one or two peripheral membrane ATP-binding proteins that couple energy to the active transport system. The integral inner-membrane proteins translocate the substrate across the membrane. It has been shown , that most of these proteins contain a conserved region located about 80 to 100 residues from their C-terminal extremity. This region seems to be located in a cytoplasmic loop between two transmembrane domains. Apart from the conserved region, the sequence of these proteins is quite divergent, and they have a variable number of transmembrane helices, This entry describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulphate ABC transporter; GO: 0015563 uptake transmembrane transporter activity, 0006810 transport, 0016020 membrane.

Probab=97.15 E-value=7.1e-06 Score=54.48 Aligned_cols=116 Identities=20% Similarity=0.098 Sum_probs=69.2 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------- Q ss_conf 999999977879999999998346367899989689989988898768999997410478999999754999-------- Q gi|254780171|r 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-------- 341 (398) Q Consensus 270 ~iaL~l~taAyiaEivR~gI~sVpkGQ~EAA~aLGls~~q~~r~VIlPQAlR~~iP~l~nq~i~l~K~SSLa-------- 341 (398) T Consensus 155 ~lAmiFvs~PFVvRev~PVL~Elg~e~EEAA~tLGA~~WQtFwRV~LP~----i~w~llyG-v~Lt~aRAlGEFGaV~~v 229 (280) T TIGR00969 155 ALAMIFVSLPFVVREVQPVLEELGTEAEEAAATLGASGWQTFWRVTLPS----IRWALLYG-VVLTFARALGEFGAVVVV 229 (280) T ss_pred EEEEEEECCCCEEEEECCCHHHCCCCHHHHHHHCCCCCCEEEEEEECCC----CCHHHHHH-HHHHHHHHHHCCEEEEEE T ss_conf 6665342168045431001341385578999862899830267876688----72678886-787655654301107899 Q ss_pred -HHHHHHHHHHH-HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf -99999999999-999983137758999999999999999999999999678 Q gi|254780171|r 342 -VAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 (398) Q Consensus 342 -~~Ig~~dl~~~-~~~~~~~t~~~~e~~~i~~~~Yl~isl~iS~~~n~~~rr 391 (398) T Consensus 230 Sgni~gkt~~lplli~~~l~~Yd~~gA~~ia~vL-~l~slv~L~~~~~Lq~R 280 (280) T TIGR00969 230 SGNIPGKTLTLPLLIFERLEQYDYPGAYVIAAVL-LLVSLVTLFLINLLQAR 280 (280) T ss_pred ECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH-HHHHHHHHHHHHHHHCC T ss_conf 4468863120156644476603607899999999-99999999999985039

HHsearch alignment for GI: 254780171 and conserved domain: TIGR00969