HHsearch alignment for GI: 254780171 and conserved domain: TIGR00974
>TIGR00974 3a0107s02c phosphate ABC transporter, permease protein PstA; InterPro: IPR005672 Bacterial binding protein-dependent transport systems , are multicomponent systems typically composed of a periplasmic substrate-binding protein, one or two reciprocally homologous integral inner-membrane proteins and one or two peripheral membrane ATP-binding proteins that couple energy to the active transport system. The integral inner-membrane proteins translocate the substrate across the membrane. It has been shown , that most of these proteins contain a conserved region located about 80 to 100 residues from their C-terminal extremity. This region seems to be located in a cytoplasmic loop between two transmembrane domains. Apart from the conserved region, the sequence of these proteins is quite divergent, and they have a variable number of transmembrane helices,; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0015114 phosphate transmembrane transporter activity, 0006817 phosphate transport, 0009276 1-2nm peptidoglycan-based cell wall.
Probab=99.03 E-value=7.5e-08 Score=66.55 Aligned_cols=189 Identities=20% Similarity=0.283 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999972887781213889984437542235686526999999999999999999999
Q gi|254780171|r 27 ISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIP 106 (398)
Q Consensus 27 ~~~Q~~~~~~~~~~~~~l~~n~~~nl~~~gi~~gf~FL~~~agf~I~~~~i~y~~~~sy~~a~~vGl~NTl~va~~givl 106 (398)
T Consensus 9 ~~~~~~~~~~L~~il~~i~~~G~~~ln~~----n~~fft~~~~~~~~~~-------~~-~GGi~~AivGT~~~~~~~~~i 76 (302)
T TIGR00974 9 LLSALLALLPLIWILWYILIKGLPALNNN----NLEFFTSSPTPTGTEG-------DG-EGGIGPAIVGTLLLILLAIVI 76 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHEECC----CCCEEEECCCCCCCCC-------CC-CCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999996230002115----7600453577777888-------88-753367799999999999999
Q ss_pred HHHHHHHHHHH--HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCCCCCC
Q ss_conf 99999999999--6264246787799999999501469999999999873012103444103720352010003545355
Q gi|254780171|r 107 ATIIGTLVGAG--RLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184 (398)
Q Consensus 107 atiLG~~iGi~--RlS~N~ll~~la~~YVE~~RN~PLLlql~fwy~~v~~~lP~~~~~~~~~~~~flsnRGL~iP~p~~~ 184 (398)
T Consensus 77 a~PlGi~~aiYL~EYa~~~~~~~~ir~~~~~LaG~PSIv~GLFg~~~fv~~~------------------~i~l-----~ 133 (302)
T TIGR00974 77 AVPLGIGAAIYLAEYAKEGRFTKFIRFAVDVLAGVPSIVVGLFGYALFVKTL------------------GIYL-----G 133 (302)
T ss_pred HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------HHHH-----H
T ss_conf 9999999888755306789400568788887521169999999999999776------------------8645-----2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
Q ss_conf 67004688778899999999999999864311223320455421010355899976544433221001311126821487
Q gi|254780171|r 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264 (398)
Q Consensus 185 ~g~~~~l~~lilaiila~~l~~~a~~~~~~tg~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~p~l~~f~~~gG~~l~p 264 (398)
T Consensus 134 ~~~----------------------------------------------------------------------------- 136 (302)
T TIGR00974 134 GGF----------------------------------------------------------------------------- 136 (302)
T ss_pred HHH-----------------------------------------------------------------------------
T ss_conf 206-----------------------------------------------------------------------------
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 899999-999999778799999999983463678999896899899888987689999974104
Q gi|254780171|r 265 EFMSLY-IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 (398)
Q Consensus 265 ~f~a~~-iaL~l~taAyiaEivR~gI~sVpkGQ~EAA~aLGls~~q~~r~VIlPQAlR~~iP~l 327 (398)
T Consensus 137 S~laG~~LaLa~L~LP~iirtTeEal~~VP~~~Reas~ALGa~Kw~TI~~~vLP~A~~GI~TG~ 200 (302)
T TIGR00974 137 SALAGALLALAILILPVIIRTTEEALKAVPKDLREASLALGATKWQTILKIVLPAALPGILTGI 200 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHEEEEEEECCCHHHHHHHH
T ss_conf 7787999999999999999998999972478888999972600211332244131036899999