HHsearch alignment for GI: 254780171 and conserved domain: TIGR00974

>TIGR00974 3a0107s02c phosphate ABC transporter, permease protein PstA; InterPro: IPR005672 Bacterial binding protein-dependent transport systems , are multicomponent systems typically composed of a periplasmic substrate-binding protein, one or two reciprocally homologous integral inner-membrane proteins and one or two peripheral membrane ATP-binding proteins that couple energy to the active transport system. The integral inner-membrane proteins translocate the substrate across the membrane. It has been shown , that most of these proteins contain a conserved region located about 80 to 100 residues from their C-terminal extremity. This region seems to be located in a cytoplasmic loop between two transmembrane domains. Apart from the conserved region, the sequence of these proteins is quite divergent, and they have a variable number of transmembrane helices,; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0015114 phosphate transmembrane transporter activity, 0006817 phosphate transport, 0009276 1-2nm peptidoglycan-based cell wall.
Probab=99.03  E-value=7.5e-08  Score=66.55  Aligned_cols=189  Identities=20%  Similarity=0.283  Sum_probs=117.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999999972887781213889984437542235686526999999999999999999999
Q gi|254780171|r   27 ISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIP  106 (398)
Q Consensus        27 ~~~Q~~~~~~~~~~~~~l~~n~~~nl~~~gi~~gf~FL~~~agf~I~~~~i~y~~~~sy~~a~~vGl~NTl~va~~givl  106 (398)
T Consensus         9 ~~~~~~~~~~L~~il~~i~~~G~~~ln~~----n~~fft~~~~~~~~~~-------~~-~GGi~~AivGT~~~~~~~~~i   76 (302)
T TIGR00974         9 LLSALLALLPLIWILWYILIKGLPALNNN----NLEFFTSSPTPTGTEG-------DG-EGGIGPAIVGTLLLILLAIVI   76 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCHHEECC----CCCEEEECCCCCCCCC-------CC-CCCHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999996230002115----7600453577777888-------88-753367799999999999999


Q ss_pred             HHHHHHHHHHH--HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCCCCCC
Q ss_conf             99999999999--6264246787799999999501469999999999873012103444103720352010003545355
Q gi|254780171|r  107 ATIIGTLVGAG--RLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD  184 (398)
Q Consensus       107 atiLG~~iGi~--RlS~N~ll~~la~~YVE~~RN~PLLlql~fwy~~v~~~lP~~~~~~~~~~~~flsnRGL~iP~p~~~  184 (398)
T Consensus        77 a~PlGi~~aiYL~EYa~~~~~~~~ir~~~~~LaG~PSIv~GLFg~~~fv~~~------------------~i~l-----~  133 (302)
T TIGR00974        77 AVPLGIGAAIYLAEYAKEGRFTKFIRFAVDVLAGVPSIVVGLFGYALFVKTL------------------GIYL-----G  133 (302)
T ss_pred             HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------HHHH-----H
T ss_conf             9999999888755306789400568788887521169999999999999776------------------8645-----2


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
Q ss_conf             67004688778899999999999999864311223320455421010355899976544433221001311126821487
Q gi|254780171|r  185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP  264 (398)
Q Consensus       185 ~g~~~~l~~lilaiila~~l~~~a~~~~~~tg~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~p~l~~f~~~gG~~l~p  264 (398)
T Consensus       134 ~~~-----------------------------------------------------------------------------  136 (302)
T TIGR00974       134 GGF-----------------------------------------------------------------------------  136 (302)
T ss_pred             HHH-----------------------------------------------------------------------------
T ss_conf             206-----------------------------------------------------------------------------


Q ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             899999-999999778799999999983463678999896899899888987689999974104
Q gi|254780171|r  265 EFMSLY-IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL  327 (398)
Q Consensus       265 ~f~a~~-iaL~l~taAyiaEivR~gI~sVpkGQ~EAA~aLGls~~q~~r~VIlPQAlR~~iP~l  327 (398)
T Consensus       137 S~laG~~LaLa~L~LP~iirtTeEal~~VP~~~Reas~ALGa~Kw~TI~~~vLP~A~~GI~TG~  200 (302)
T TIGR00974       137 SALAGALLALAILILPVIIRTTEEALKAVPKDLREASLALGATKWQTILKIVLPAALPGILTGI  200 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHEEEEEEECCCHHHHHHHH
T ss_conf             7787999999999999999998999972478888999972600211332244131036899999