HHsearch alignment of GI: 254780171 and MMDB domain: 3dhw_A_
>3dhw_A (A:) D-methionine transport system permease protein METI; ABC-transporter, methionine uptake transporter, membrane protein, amino-acid transport; 3.70A {Escherichia coli K12}
Probab=99.94 E-value=5.3e-26 Score=176.77 Aligned_cols=206 Identities=22% Similarity=0.316 Sum_probs=173.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6526999999999999999999999999999999996-------264246787799999999501469999999999873
Q gi|254780171|r 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-------LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLS 154 (398)
Q Consensus 82 ~~sy~~a~~vGl~NTl~va~~givlatiLG~~iGi~R-------lS~N~ll~~la~~YVE~~RN~PLLlql~fwy~~v~~ 154 (398)
+++..+.++.++.||+++++.+.++++++|+.+|+.- .-.+..+..+.....+.++.+|.++++.+.+.....
T Consensus 2 s~~~~~~l~~~l~~tl~~~~~~~~i~~vig~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (217)
T 3dhw_A 2 SEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRV 81 (217)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGGGGGGTTCSSSCCSSHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 87899999999999999999999999999999999999987344320189999999999999999999999999986455
Q ss_pred HCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHH
Q ss_conf 01210344410372035201000354535567004688778899999999999999864311223320455421010355
Q gi|254780171|r 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 (398)
Q Consensus 155 ~lP~~~~~~~~~~~~flsnRGL~iP~p~~~~g~~~~l~~lilaiila~~l~~~a~~~~~~tg~~~~~~~~~~~~~~~~p~ 234 (398)
..+
T Consensus 82 ~~~----------------------------------------------------------------------------- 84 (217)
T 3dhw_A 82 IVG----------------------------------------------------------------------------- 84 (217)
T ss_dssp TTC-----------------------------------------------------------------------------
T ss_pred HCC-----------------------------------------------------------------------------
T ss_conf 204-----------------------------------------------------------------------------
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 89997654443322100131112682148789999999999977879999999998346367899989689989988898
Q gi|254780171|r 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 (398)
Q Consensus 235 l~~~~~~~~~~~~~p~l~~f~~~gG~~l~p~f~a~~iaL~l~taAyiaEivR~gI~sVpkGQ~EAA~aLGls~~q~~r~V 314 (398)
. ...+.+.++++++++.+|+.+++|++++++|++|.|||+++|+|++|++++|
T Consensus 85 -------------------------~--~~~~~~~ii~~~~~~~~~i~~~~~~~l~~i~~~~~eaA~~lG~s~~q~~~~v 137 (217)
T 3dhw_A 85 -------------------------T--SIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKV 137 (217)
T ss_dssp -------------------------C--SSSHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTTTHHHHHTCCTHHHHHHT
T ss_pred -------------------------C--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHH
T ss_conf -------------------------5--3018899898899724689899998888615027788860698742142673
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7689999974104789999997549999999999999999998313775---8999999999999999999999999678
Q gi|254780171|r 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNAK 391 (398)
Q Consensus 315 IlPQAlR~~iP~l~nq~i~l~K~SSLa~~Ig~~dl~~~~~~~~~~t~~~---~e~~~i~~~~Yl~isl~iS~~~n~~~rr 391 (398)
++||+++.++|++.+.+...+|+++.+..+|.+|+...+.....++++. .....+.++.++++++....+.+++|||
T Consensus 138 ~lP~~~p~i~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~rR 217 (217)
T 3dhw_A 138 LLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTRK 217 (217)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHCCSTTCCHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 09976999999999999999999999999987599999999999750189999999999999999999999999985699