HHSEARCH alignment of GI: 254780171 and SCOP domain: d2onkc1

Alignment
>d2onkc1 f.58.1.1 (C:1-252) Molybdate/tungstate transport system permease protein WtpB (ModB) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.73  E-value=4.6e-16  Score=113.84  Aligned_cols=165  Identities=15%  Similarity=0.101  Sum_probs=129.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC
Q ss_conf             99999999999999999999999999999626424678779999999950146999999999987301210344410372
Q gi|254780171|r   89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG  168 (398)
Q Consensus        89 ~~vGl~NTl~va~~givlatiLG~~iGi~RlS~N~ll~~la~~YVE~~RN~PLLlql~fwy~~v~~~lP~~~~~~~~~~~  168 (398)
                      +...+.||+.+++.+.++++++|+.+|..--..++..++.......+-.-+|..+-.+.|.... ...+           
T Consensus        47 ~~~~~~nSl~~~~~~~~i~~i~g~~la~~l~~~~~~~~~~~~~~~~~p~~ip~~v~~~~~~~~~-~~~~-----------  114 (252)
T d2onkc1          47 VWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVF-GSSG-----------  114 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSSHHHHHHHHHHHHHSCHHHHHHHHHHHH-STTS-----------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHC-CCCC-----------
T ss_conf             9999999999999999999999999999998731321689999987521687177777776412-3321-----------


Q ss_pred             EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHH
Q ss_conf             03520100035453556700468877889999999999999986431122332045542101035589997654443322
Q gi|254780171|r  169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK  248 (398)
Q Consensus       169 ~flsnRGL~iP~p~~~~g~~~~l~~lilaiila~~l~~~a~~~~~~tg~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~  248 (398)
                             ....+.                                                                   
T Consensus       115 -------~~~~~~-------------------------------------------------------------------  120 (252)
T d2onkc1         115 -------LIGSFS-------------------------------------------------------------------  120 (252)
T ss_dssp             -------TTTTTC-------------------------------------------------------------------
T ss_pred             -------CCCCCC-------------------------------------------------------------------
T ss_conf             -------000124-------------------------------------------------------------------


Q ss_pred             HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             10013111268214878999999999997787999999999834636789998968998998889876899999741047
Q gi|254780171|r  249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT  328 (398)
Q Consensus       249 p~l~~f~~~gG~~l~p~f~a~~iaL~l~taAyiaEivR~gI~sVpkGQ~EAA~aLGls~~q~~r~VIlPQAlR~~iP~l~  328 (398)
                                +......+...+++.+.+.-.|...+.++|++++||++.|||+++|.|++|++|+|++|++.+.+++...
T Consensus       121 ----------~~~~~~~~~~iii~~~~~~~p~~~~~~~~~~~~i~~~~~eaA~~lGas~~~~~~~i~lP~~~p~i~~~~~  190 (252)
T d2onkc1         121 ----------PLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAI  190 (252)
T ss_dssp             ----------SSCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             ----------CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHH
T ss_conf             ----------5442001332110100112110368999999750388887887669983325469870876889999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHH
Q ss_conf             899999975499999999999
Q gi|254780171|r  329 SQYLNLLKNSSLAVAVGFADL  349 (398)
Q Consensus       329 nq~i~l~K~SSLa~~Ig~~dl  349 (398)
                      -+++..+||-+....+|..+-
T Consensus       191 l~~~~~~~~~~~~~~~~~~~~  211 (252)
T d2onkc1         191 MSWARGISEFGAVVVIAYYPM  211 (252)
T ss_dssp             HHHHHHHHCCHHHHTTCCSSC
T ss_pred             HHHHHHHHHHHHHHHHCCCCC
T ss_conf             999889999888751148985


SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: MetI-like
superfamily: MetI-like
family: MetI-like
domain: Molybdate/tungstate transport system permease protein WtpB (ModB)
species: Archaeoglobus fulgidus [TaxId: 2234]